BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045105
(601 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224118338|ref|XP_002317794.1| predicted protein [Populus trichocarpa]
gi|222858467|gb|EEE96014.1| predicted protein [Populus trichocarpa]
Length = 852
Score = 924 bits (2388), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/636 (69%), Positives = 516/636 (81%), Gaps = 35/636 (5%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKCGSLDDAKKV MPERD V+WNSV+TACAANG+V EALE LE+M SLD PN+V
Sbjct: 204 MYGKCGSLDDAKKVLVKMPERDSVTWNSVITACAANGMVYEALEFLEKMKSLDYSMPNVV 263
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SWSAVIGGF QNGYDEEAI MLFRMQ EGL PNA+TL+ VLPACARLQ+L LGK+ HGYI
Sbjct: 264 SWSAVIGGFAQNGYDEEAIEMLFRMQVEGLVPNAQTLAGVLPACARLQRLDLGKQLHGYI 323
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
TR+ F+SNP VVN LVDVYRRCGDM A KIF KFS+KN +SCNT+IVGYCE+G+V++A+
Sbjct: 324 TRHDFISNPVVVNALVDVYRRCGDMGGAAKIFLKFSVKNVLSCNTMIVGYCESGDVSKAK 383
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
ELFD M+ LG++RG+ISWNS+ISGYV N ++DEAFSMF+++LM +GIEP SFT GSVL A
Sbjct: 384 ELFDCMDVLGIERGLISWNSIISGYVRNFMFDEAFSMFQNMLMEEGIEPDSFTLGSVLTA 443
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDE--------- 291
CAD SLR+GKEIHA AI GLQSDTFVGGALVEMY + QDL AAQ+AFDE
Sbjct: 444 CADTISLRQGKEIHAQAIVKGLQSDTFVGGALVEMYSKCQDLTAAQVAFDEVMEKDVPTW 503
Query: 292 ------------IENIENLLGKMKEDGFEPNVYTWNA--------------MQLFSEMLS 325
IE I+ LL KMK DG+ PN+YTWN+ MQLFSEM
Sbjct: 504 NALISGYTRSNQIERIQYLLEKMKGDGYHPNIYTWNSILAGLVENRQLDLTMQLFSEMQI 563
Query: 326 LDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKH 385
L PDIYTVGIIL ACS LAT+ERGKQ HA++I+CGYD+DVHIG ALVDMYAKCGSLK+
Sbjct: 564 SKLRPDIYTVGIILPACSRLATLERGKQAHAHSIKCGYDTDVHIGAALVDMYAKCGSLKY 623
Query: 386 ARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVH 445
A+LAY RIS P+LVS NAMLTA AMHGHG+EGI+ F+ +LA GF PDH++FLS LS+CVH
Sbjct: 624 AQLAYDRISNPNLVSHNAMLTACAMHGHGEEGISLFQTMLALGFIPDHVTFLSVLSSCVH 683
Query: 446 AGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGA 505
GS++TG EFFDLM YY+VKP+LKHYT MVDLLSR+G+L EAYE IKK+P+ DSV+WGA
Sbjct: 684 VGSVETGCEFFDLMGYYNVKPTLKHYTSMVDLLSRSGQLHEAYELIKKMPVECDSVLWGA 743
Query: 506 LLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRM 565
LLGGCV+HGN+E G+IAA+RLIELEPNN+GNYV+LANL AYA RW+DLAR R MKDR M
Sbjct: 744 LLGGCVTHGNIELGEIAAERLIELEPNNSGNYVLLANLHAYARRWTDLARVRGMMKDRGM 803
Query: 566 HKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
HKSPGCSWIED++EIH F A DRSH R+EEIY +D
Sbjct: 804 HKSPGCSWIEDKNEIHSFLACDRSHKRAEEIYATLD 839
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 153/582 (26%), Positives = 258/582 (44%), Gaps = 81/582 (13%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +CG L DA +F+ MP R NL
Sbjct: 103 MYARCGLLKDADFLFETMPMR------------------------------------NLH 126
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW A++ + +G EEA + +Q +G+E + V AC+ L + LG++ HG +
Sbjct: 127 SWKAILSVYLDHGLFEEAFLLFQVLQFDGVELDFFVFPLVFKACSGLGSVELGRQLHGLV 186
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ F N +V N L+D+Y +CG + A K+ K ++ V+ N++I NG V EA
Sbjct: 187 IKFRFCLNIYVSNALIDMYGKCGSLDDAKKVLVKMPERDSVTWNSVITACAANGMVYEAL 246
Query: 181 ELFDQMEHLGVQR-GIISWNSMISGYVDNSLYDEAFSM-FRDLLMRDGIEPTSFTFGSVL 238
E ++M+ L ++SW+++I G+ N +EA M FR + +G+ P + T VL
Sbjct: 247 EFLEKMKSLDYSMPNVVSWSAVIGGFAQNGYDEEAIEMLFR--MQVEGLVPNAQTLAGVL 304
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAF--------- 289
ACA + L GK++H S+ V ALV++Y R D+ A F
Sbjct: 305 PACARLQRLDLGKQLHGYITRHDFISNPVVVNALVDVYRRCGDMGGAAKIFLKFSVKNVL 364
Query: 290 ------------DEIENIENLLGKMKEDGFEPNVYTWN--------------AMQLFSEM 323
++ + L M G E + +WN A +F M
Sbjct: 365 SCNTMIVGYCESGDVSKAKELFDCMDVLGIERGLISWNSIISGYVRNFMFDEAFSMFQNM 424
Query: 324 LSLD-LTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGS 382
L + + PD +T+G +L+AC+ ++ +GK++HA AI G SD +G ALV+MY+KC
Sbjct: 425 LMEEGIEPDSFTLGSVLTACADTISLRQGKEIHAQAIVKGLQSDTFVGGALVEMYSKCQD 484
Query: 383 LKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSA 442
L A++A+ + D+ + NA+++ Y + ++ G+ P+ ++ S L+
Sbjct: 485 LTAAQVAFDEVMEKDVPTWNALISGYTRSNQIERIQYLLEKMKGDGYHPNIYTWNSILAG 544
Query: 443 CVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGEL---GEAYEFIKKIPMAPD 499
V + + F M ++P + ++ SR L +A+ K D
Sbjct: 545 LVENRQLDLTMQLFSEMQISKLRPDIYTVGIILPACSRLATLERGKQAHAHSIKCGYDTD 604
Query: 500 SVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLA 541
+ AL+ G+L++ Q+A DR+ PN + ML
Sbjct: 605 VHIGAALVDMYAKCGSLKYAQLAYDRIS--NPNLVSHNAMLT 644
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 114/506 (22%), Positives = 198/506 (39%), Gaps = 112/506 (22%)
Query: 93 NARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIF 152
N +SVL +C + LGK+ H + + GF ++ F+ L+ +Y RCG + A +F
Sbjct: 61 NTSKYASVLDSC---KCPKLGKQVHAHTIKTGFDADGFIDTKLLQMYARCGLLKDADFLF 117
Query: 153 SKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYD 212
++N S I+ Y ++G L++
Sbjct: 118 ETMPMRNLHSWKAILSVYLDHG-----------------------------------LFE 142
Query: 213 EAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGAL 272
EAF +F+ +L DG+E F F V AC+ + S+ G+++H L I + +V AL
Sbjct: 143 EAFLLFQ-VLQFDGVELDFFVFPLVFKACSGLGSVELGRQLHGLVIKFRFCLNIYVSNAL 201
Query: 273 VEMYCR---------------------YQDLVAAQMAFDEIENIENLLGKMKE-DGFEPN 310
++MY + + ++ A A + L KMK D PN
Sbjct: 202 IDMYGKCGSLDDAKKVLVKMPERDSVTWNSVITACAANGMVYEALEFLEKMKSLDYSMPN 261
Query: 311 VYTWN--------------AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHA 356
V +W+ A+++ M L P+ T+ +L AC+ L ++ GKQ+H
Sbjct: 262 VVSWSAVIGGFAQNGYDEEAIEMLFRMQVEGLVPNAQTLAGVLPACARLQRLDLGKQLHG 321
Query: 357 YAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGK- 415
Y R + S+ + ALVD+Y +CG + A + + S +++S N M+ Y G
Sbjct: 322 YITRHDFISNPVVVNALVDVYRRCGDMGGAAKIFLKFSVKNVLSCNTMIVGYCESGDVSK 381
Query: 416 ----------------------------------EGIAHFRRIL-ASGFRPDHISFLSAL 440
E + F+ +L G PD + S L
Sbjct: 382 AKELFDCMDVLGIERGLISWNSIISGYVRNFMFDEAFSMFQNMLMEEGIEPDSFTLGSVL 441
Query: 441 SACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDS 500
+AC S++ G E ++ +V++ S+ +L A ++ M D
Sbjct: 442 TACADTISLRQGKEIHAQAIVKGLQSDTFVGGALVEMYSKCQDLTAAQVAFDEV-MEKDV 500
Query: 501 VMWGALLGGCVSHGNLEFGQIAADRL 526
W AL+ G +E Q +++
Sbjct: 501 PTWNALISGYTRSNQIERIQYLLEKM 526
>gi|357436395|ref|XP_003588473.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477521|gb|AES58724.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 827
Score = 811 bits (2095), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/636 (62%), Positives = 474/636 (74%), Gaps = 37/636 (5%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKCGSLD+AKKV + M ++DCVSWNS++TAC ANG+V EAL+ LE M L PN+V
Sbjct: 178 MYGKCGSLDEAKKVLEGMTQKDCVSWNSIITACVANGVVYEALDLLENML-LSELEPNVV 236
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+WSAVIGGF+ N YD E++ + RM G+ P+ARTL+SVLPAC+R++ L +GKE HGYI
Sbjct: 237 TWSAVIGGFSSNAYDVESVELFARMVGAGVAPDARTLASVLPACSRMKWLFVGKELHGYI 296
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R+ SN FV N LV +YRRCGDM SA KIFSKF+ K S NT+IVGY ENGNV +A+
Sbjct: 297 VRHELFSNGFVANALVGMYRRCGDMKSAFKIFSKFARKCAASYNTMIVGYLENGNVGKAK 356
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
ELF QME GV+R ISWN MISG+VDN ++D+A +FRDLLM +GIEP SFT GS+L
Sbjct: 357 ELFYQMEQEGVERDRISWNCMISGHVDNFMFDDALMLFRDLLM-EGIEPDSFTLGSILTG 415
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE------- 293
ADM +R+GKEIH++AI GLQS++FVGGALVEMYC+ D++AAQMAFDEI
Sbjct: 416 FADMTCIRQGKEIHSIAIVKGLQSNSFVGGALVEMYCKCNDIIAAQMAFDEISERDTSTW 475
Query: 294 --------------NIENLLGKMKEDGFEPNVYTWN--------------AMQLFSEMLS 325
I L+ +MK DGFEPNVYTWN AMQLF+EM
Sbjct: 476 NALISGYARCNQIGKIRELVERMKSDGFEPNVYTWNSILAGLVENKQYDLAMQLFNEMQV 535
Query: 326 LDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKH 385
L PDIYTVGIIL+ACS LAT+ RGKQVHAY+IR GYDSD HIG LVDMYAKCGS+KH
Sbjct: 536 SSLRPDIYTVGIILAACSKLATIHRGKQVHAYSIRAGYDSDAHIGATLVDMYAKCGSIKH 595
Query: 386 ARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVH 445
Y +IS P+LV NAMLTAYAMHGHG+EGI FRR+L S RPDH++FLS LS+CVH
Sbjct: 596 CYQVYNKISNPNLVCHNAMLTAYAMHGHGEEGIVIFRRMLDSRVRPDHVTFLSVLSSCVH 655
Query: 446 AGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGA 505
AGSIK G E F LM Y++ P+LKHYTCMVDLLSRAG+L EAY+ IK +PM DSV W A
Sbjct: 656 AGSIKIGYECFYLMETYNITPTLKHYTCMVDLLSRAGKLDEAYQLIKNMPMEADSVTWSA 715
Query: 506 LLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRM 565
LLGGC H + G+IAA++LIELEP+NTGNYV+LANL+A AGRW DLA+TR+ M D+ M
Sbjct: 716 LLGGCFIHKEVALGEIAAEKLIELEPSNTGNYVLLANLYASAGRWHDLAKTRELMNDKGM 775
Query: 566 HKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
KSPGCSWIEDRD +H F ASD+SH R EEIY ++D
Sbjct: 776 QKSPGCSWIEDRDGVHIFLASDKSHQRVEEIYFMLD 811
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 149/545 (27%), Positives = 252/545 (46%), Gaps = 78/545 (14%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGL--EPNARTLSSVLPACARLQKLSLGKE 115
NL SW+AV+ G + + +GL + + VL C L L LG++
Sbjct: 96 NLHSWTAVLRLHLNMGLFYKGFMLFEEFLCDGLGEKLDFFVFPVVLNICCGLGDLELGRQ 155
Query: 116 FHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGN 175
HG + ++GF++N +V N L+D+Y +CG + A K+ + K+ VS N+II NG
Sbjct: 156 VHGMVLKHGFVTNVYVGNALIDMYGKCGSLDEAKKVLEGMTQKDCVSWNSIITACVANGV 215
Query: 176 VAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFG 235
V EA +L + M ++ +++W+++I G+ N+ E+ +F ++ G+ P + T
Sbjct: 216 VYEALDLLENMLLSELEPNVVTWSAVIGGFSSNAYDVESVELFARMV-GAGVAPDARTLA 274
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDE---- 291
SVL AC+ M L GKE+H + L S+ FV ALV MY R D+ +A F +
Sbjct: 275 SVLPACSRMKWLFVGKELHGYIVRHELFSNGFVANALVGMYRRCGDMKSAFKIFSKFARK 334
Query: 292 ------------IEN-----IENLLGKMKEDGFEPNVYTWN--------------AMQLF 320
+EN + L +M+++G E + +WN A+ LF
Sbjct: 335 CAASYNTMIVGYLENGNVGKAKELFYQMEQEGVERDRISWNCMISGHVDNFMFDDALMLF 394
Query: 321 SEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKC 380
++L + PD +T+G IL+ + + + +GK++H+ AI G S+ +G ALV+MY KC
Sbjct: 395 RDLLMEGIEPDSFTLGSILTGFADMTCIRQGKEIHSIAIVKGLQSNSFVGGALVEMYCKC 454
Query: 381 GSLKHARLAYKRISTPDLVSQNAMLTAYA--------------MHGHGKE---------- 416
+ A++A+ IS D + NA+++ YA M G E
Sbjct: 455 NDIIAAQMAFDEISERDTSTWNALISGYARCNQIGKIRELVERMKSDGFEPNVYTWNSIL 514
Query: 417 -----------GIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEF--FDLMAYYD 463
+ F + S RPD + L+AC +I G + + + A YD
Sbjct: 515 AGLVENKQYDLAMQLFNEMQVSSLRPDIYTVGIILAACSKLATIHRGKQVHAYSIRAGYD 574
Query: 464 VKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAA 523
+ +VD+ ++ G + Y+ KI P+ V A+L HG+ E G +
Sbjct: 575 SDAHIG--ATLVDMYAKCGSIKHCYQVYNKIS-NPNLVCHNAMLTAYAMHGHGEEGIVIF 631
Query: 524 DRLIE 528
R+++
Sbjct: 632 RRMLD 636
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 148/337 (43%), Gaps = 46/337 (13%)
Query: 230 TSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAF 289
TS T+ ++L + NSL GK++H+ +I G + FV L++MY A F
Sbjct: 33 TSTTYSTILQSS---NSLTLGKQLHSHSIKTGFYNHNFVQTKLLQMYSINSSFEDAWHMF 89
Query: 290 DEIENIENLLGKMKEDGFEPNV-YTWNAMQLFSEML--SLDLTPDIYTVGIILSACSSLA 346
D++ ++NL N+ + LF E L L D + ++L+ C L
Sbjct: 90 DKM-TLKNLHSWTAVLRLHLNMGLFYKGFMLFEEFLCDGLGEKLDFFVFPVVLNICCGLG 148
Query: 347 TMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLT 406
+E G+QVH ++ G+ ++V++G AL+DMY KCGSL A+ + ++ D VS N+++T
Sbjct: 149 DLELGRQVHGMVLKHGFVTNVYVGNALIDMYGKCGSLDEAKKVLEGMTQKDCVSWNSIIT 208
Query: 407 A-----------------------------------YAMHGHGKEGIAHFRRILASGFRP 431
A ++ + + E + F R++ +G P
Sbjct: 209 ACVANGVVYEALDLLENMLLSELEPNVVTWSAVIGGFSSNAYDVESVELFARMVGAGVAP 268
Query: 432 DHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAY--- 488
D + S L AC + G E + +++ + +V + R G++ A+
Sbjct: 269 DARTLASVLPACSRMKWLFVGKELHGYIVRHELFSNGFVANALVGMYRRCGDMKSAFKIF 328
Query: 489 -EFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAAD 524
+F +K + ++++ G L G V F Q+ +
Sbjct: 329 SKFARKCAASYNTMIVGYLENGNVGKAKELFYQMEQE 365
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 105/217 (48%), Gaps = 10/217 (4%)
Query: 320 FSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAK 379
FS + + LT Y+ IL + +SL GKQ+H+++I+ G+ + + T L+ MY+
Sbjct: 24 FSLLHTPPLTSTTYST--ILQSSNSLTL---GKQLHSHSIKTGFYNHNFVQTKLLQMYSI 78
Query: 380 CGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGF--RPDHISFL 437
S + A + +++ +L S A+L + G +G F L G + D F
Sbjct: 79 NSSFEDAWHMFDKMTLKNLHSWTAVLRLHLNMGLFYKGFMLFEEFLCDGLGEKLDFFVFP 138
Query: 438 SALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMA 497
L+ C G ++ G + ++ + ++ ++D+ + G L EA + ++ +
Sbjct: 139 VVLNICCGLGDLELGRQVHGMVLKHGFVTNVYVGNALIDMYGKCGSLDEAKKVLEGMT-Q 197
Query: 498 PDSVMWGALLGGCVSHGNL-EFGQIAADRLI-ELEPN 532
D V W +++ CV++G + E + + L+ ELEPN
Sbjct: 198 KDCVSWNSIITACVANGVVYEALDLLENMLLSELEPN 234
>gi|359490816|ref|XP_002271825.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 702
Score = 730 bits (1884), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/636 (58%), Positives = 441/636 (69%), Gaps = 91/636 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYG+ G LDDA VF MP+R NL
Sbjct: 103 MYGRFGCLDDANLVFVKMPQR------------------------------------NLY 126
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A++ +GY EEA+ + ++Q + + VL C L+ L LG++ HG
Sbjct: 127 SWTAILSVHVDHGYFEEALSLFEKLQLDDIGLEFFVFPVVLKLCGGLRVLELGRQLHGV- 185
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
V +RC DM SALKIFS FS+KN VS NT+IVGYCENGNV +A+
Sbjct: 186 -----------------VIKRCADMGSALKIFSGFSVKNVVSYNTMIVGYCENGNVEKAK 228
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
ELFDQME +G + ISWNSMISGY DN L+DEA SMFRDLLM +GIE SFT GSVL A
Sbjct: 229 ELFDQMELVG--KDTISWNSMISGYADNLLFDEALSMFRDLLMEEGIEADSFTLGSVLAA 286
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFD---------- 290
CADM SLR+GKE+HA A+ GL +TFVGGALVEMY + +DL AAQ+AFD
Sbjct: 287 CADMASLRRGKEVHAQAVVRGLHWNTFVGGALVEMYSKCEDLKAAQLAFDGVTERDTATW 346
Query: 291 -----------EIENIENLLGKMKEDGFEPNVYTWN--------------AMQLFSEMLS 325
++ENI+NL+ KMK DGFEPNVYTWN A++LF+EM +
Sbjct: 347 NVLISGYACCNQLENIQNLIQKMKGDGFEPNVYTWNGIISGHVENGHNELALRLFTEMQT 406
Query: 326 LDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKH 385
L PDIYTVGIIL AC+ LAT+ RGKQVHA++IR GY+ DVHIG ALVDMYAKCGS+KH
Sbjct: 407 SSLRPDIYTVGIILPACARLATIARGKQVHAHSIRQGYELDVHIGAALVDMYAKCGSIKH 466
Query: 386 ARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVH 445
A Y RIS P+LVSQNAMLTAYAMHGHG EGIA FR +L +GFRPDH++FLS LS+CVH
Sbjct: 467 AMQVYNRISNPNLVSQNAMLTAYAMHGHGDEGIALFRNMLGNGFRPDHVTFLSVLSSCVH 526
Query: 446 AGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGA 505
AG+++TG EFFDLM YY+V PSLKHYTC+VDLLSRAG L EAYE +KKIP PDSVMWGA
Sbjct: 527 AGAVETGHEFFDLMTYYNVTPSLKHYTCIVDLLSRAGRLDEAYELVKKIPRKPDSVMWGA 586
Query: 506 LLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRM 565
LLGGCV GN+E G+IAA+ LIELEPNNTGNYV+LANL+AYAGRW DL RTRQ +KDR M
Sbjct: 587 LLGGCVIWGNVELGEIAAESLIELEPNNTGNYVLLANLYAYAGRWHDLDRTRQMIKDRGM 646
Query: 566 HKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
HKSPGCSWIEDR++IH F + D+SH+++E+IYT +D
Sbjct: 647 HKSPGCSWIEDREDIHVFLSCDKSHEKTEDIYTTLD 682
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 90/203 (44%), Gaps = 27/203 (13%)
Query: 326 LDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKH 385
LD D T +L +C T+ GKQVHA+ ++ G+ + T L+ MY + G L
Sbjct: 56 LDKQIDSSTYASLLESCR---TLNLGKQVHAHTLKTGFHGHEFVETKLLQMYGRFGCLDD 112
Query: 386 ARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSAC-- 443
A L + ++ +L S A+L+ + HG+ +E ++ F ++ + F L C
Sbjct: 113 ANLVFVKMPQRNLYSWTAILSVHVDHGYFEEALSLFEKLQLDDIGLEFFVFPVVLKLCGG 172
Query: 444 ---------VHAGSIKTGSEF---FDLMAYYDVKPSLKHYTCMVDL-----LSRAGELGE 486
+H IK ++ + + + VK + + T +V + +A EL +
Sbjct: 173 LRVLELGRQLHGVVIKRCADMGSALKIFSGFSVKNVVSYNTMIVGYCENGNVEKAKELFD 232
Query: 487 AYEFIKKIPMAPDSVMWGALLGG 509
E + K D++ W +++ G
Sbjct: 233 QMELVGK-----DTISWNSMISG 250
>gi|356551361|ref|XP_003544044.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 688
Score = 619 bits (1597), Expect = e-174, Method: Compositional matrix adjust.
Identities = 323/575 (56%), Positives = 393/575 (68%), Gaps = 56/575 (9%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNAR--TLSSVLPACARLQKLSLGKE 115
NL SW+A++ + + G+ EEA + ++ EG+ VL C L + LG++
Sbjct: 113 NLHSWTALLRVYIEMGFFEEAFFLFEQLLYEGVRVRLDFFVFPVVLKICCGLCAVELGRQ 172
Query: 116 FHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGN 175
HG ++ GDM SA ++FS+FS K+ S N +I GY ENGN
Sbjct: 173 MHGMALKHD------------------GDMKSAFEMFSRFSRKSAASYNAMIAGYWENGN 214
Query: 176 VAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFG 235
+ +A+ELFD+ME GVQ+ ISWNSMISGYVD SL+DEA+S+FRDLL ++GIEP SFT G
Sbjct: 215 LFKAKELFDRMEQEGVQKDRISWNSMISGYVDGSLFDEAYSLFRDLL-KEGIEPDSFTLG 273
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFD----- 290
SVL CADM S+R+GKE H+LAI GLQS++ VGGALVEMY + QD+VAAQMAFD
Sbjct: 274 SVLAGCADMASIRRGKEAHSLAIVRGLQSNSIVGGALVEMYSKCQDIVAAQMAFDGVSER 333
Query: 291 ----------------EIENIENLLGKMKEDGFEPNVYTWN--------------AMQLF 320
+ E I L KM+ DGFEPNVYTWN AMQLF
Sbjct: 334 DLPTWNALISGYARCNQAEKIRELHQKMRRDGFEPNVYTWNGIIAGYVENKQYDSAMQLF 393
Query: 321 SEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKC 380
+EM +L PDIYTVGIIL+ACS LAT++RGKQVHAY+IR G+DSDVHIG ALVDMYAKC
Sbjct: 394 TEMQIANLRPDIYTVGIILAACSRLATIQRGKQVHAYSIRAGHDSDVHIGAALVDMYAKC 453
Query: 381 GSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSAL 440
G +KH Y IS P+LVS NAMLTAYAMHGHG+EGIA FRR+LAS RPDH++FL+ L
Sbjct: 454 GDVKHCYRVYNMISNPNLVSHNAMLTAYAMHGHGEEGIALFRRMLASKVRPDHVTFLAVL 513
Query: 441 SACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDS 500
S+CVHAGS++ G E LM Y+V PSLKHYTCMVDLLSRAG+L EAYE IK +P D+
Sbjct: 514 SSCVHAGSLEIGHECLALMVAYNVMPSLKHYTCMVDLLSRAGQLYEAYELIKNLPTEADA 573
Query: 501 VMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKM 560
V W ALLGGC H ++ G+IAA++LIELEPNN GNYVMLANL+A AG+W L +TRQ M
Sbjct: 574 VTWNALLGGCFIHNEVDLGEIAAEKLIELEPNNPGNYVMLANLYASAGKWHYLTQTRQLM 633
Query: 561 KDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEE 595
KD M K PGCSWIEDRD IH F A D H + +
Sbjct: 634 KDMGMQKRPGCSWIEDRDGIHVFVAKDIYHTSTSK 668
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 114/407 (28%), Positives = 203/407 (49%), Gaps = 3/407 (0%)
Query: 6 GSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAV 65
G + A ++F + S+N+++ NG + +A E +RM + + +SW+++
Sbjct: 182 GDMKSAFEMFSRFSRKSAASYNAMIAGYWENGNLFKAKELFDRMEQ-EGVQKDRISWNSM 240
Query: 66 IGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGF 125
I G+ +EA + + EG+EP++ TL SVL CA + + GKE H G
Sbjct: 241 ISGYVDGSLFDEAYSLFRDLLKEGIEPDSFTLGSVLAGCADMASIRRGKEAHSLAIVRGL 300
Query: 126 MSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQ 185
SN V LV++Y +C D+++A F S ++ + N +I GY + REL +
Sbjct: 301 QSNSIVGGALVEMYSKCQDIVAAQMAFDGVSERDLPTWNALISGYARCNQAEKIRELHQK 360
Query: 186 MEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMN 245
M G + + +WN +I+GYV+N YD A +F ++ + + + P +T G +L AC+ +
Sbjct: 361 MRRDGFEPNVYTWNGIIAGYVENKQYDSAMQLFTEMQIAN-LRPDIYTVGIILAACSRLA 419
Query: 246 SLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKED 305
++++GK++HA +I G SD +G ALV+MY + D+ ++ I N +
Sbjct: 420 TIQRGKQVHAYSIRAGHDSDVHIGAALVDMYAKCGDVKHCYRVYNMISNPNLVSHNAMLT 479
Query: 306 GFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDS 365
+ + + + LF ML+ + PD T +LS+C ++E G + A +
Sbjct: 480 AYAMHGHGEEGIALFRRMLASKVRPDHVTFLAVLSSCVHAGSLEIGHECLALMVAYNVMP 539
Query: 366 DVHIGTALVDMYAKCGSLKHARLAYKRIST-PDLVSQNAMLTAYAMH 411
+ T +VD+ ++ G L A K + T D V+ NA+L +H
Sbjct: 540 SLKHYTCMVDLLSRAGQLYEAYELIKNLPTEADAVTWNALLGGCFIH 586
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 95/400 (23%), Positives = 184/400 (46%), Gaps = 66/400 (16%)
Query: 92 PNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKI 151
P++ T +S+L +C LGK+ H + ++GF ++ FV L+ +Y R
Sbjct: 49 PSSTTYASILDSCG---SPILGKQLHAHSIKSGFNAHEFVTTKLLQMYAR---------- 95
Query: 152 FSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLY 211
N + A +FD M R + SW +++ Y++ +
Sbjct: 96 ---------------------NCSFENACHVFDTMP----LRNLHSWTALLRVYIEMGFF 130
Query: 212 DEAFSMFRDLLMRD-GIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGG 270
+EAF +F LL + F F VL C + ++ G+++H +A L+ D +
Sbjct: 131 EEAFFLFEQLLYEGVRVRLDFFVFPVVLKICCGLCAVELGRQMHGMA----LKHDGDMKS 186
Query: 271 ALVEMYCR--------YQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAM----- 317
A EM+ R Y ++A + + L +M+++G + + +WN+M
Sbjct: 187 AF-EMFSRFSRKSAASYNAMIAGYWENGNLFKAKELFDRMEQEGVQKDRISWNSMISGYV 245
Query: 318 ---------QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVH 368
LF ++L + PD +T+G +L+ C+ +A++ RGK+ H+ AI G S+
Sbjct: 246 DGSLFDEAYSLFRDLLKEGIEPDSFTLGSVLAGCADMASIRRGKEAHSLAIVRGLQSNSI 305
Query: 369 IGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASG 428
+G ALV+MY+KC + A++A+ +S DL + NA+++ YA ++ +++ G
Sbjct: 306 VGGALVEMYSKCQDIVAAQMAFDGVSERDLPTWNALISGYARCNQAEKIRELHQKMRRDG 365
Query: 429 FRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSL 468
F P+ ++ ++ V + + F M +++P +
Sbjct: 366 FEPNVYTWNGIIAGYVENKQYDSAMQLFTEMQIANLRPDI 405
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 135/317 (42%), Gaps = 50/317 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC + A+ F + ERD +WN++++ A + E ++M D PN+
Sbjct: 313 MYSKCQDIVAAQMAFDGVSERDLPTWNALISGYARCNQAEKIRELHQKMRR-DGFEPNVY 371
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+ +I G+ +N + A+ + MQ L P+ T+ +L AC+RL + GK+ H Y
Sbjct: 372 TWNGIIAGYVENKQYDSAMQLFTEMQIANLRPDIYTVGIILAACSRLATIQRGKQVHAYS 431
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R G S+ + LVD+Y +CGD+ ++++ S N VS N ++ Y +G+ E
Sbjct: 432 IRAGHDSDVHIGAALVDMYAKCGDVKHCYRVYNMISNPNLVSHNAMLTAYAMHGHGEEGI 491
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LF +M + + P TF +VL +
Sbjct: 492 ALFRRM------------------------------------LASKVRPDHVTFLAVLSS 515
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C SL G E AL +A V +L C L A ++ E I+NL
Sbjct: 516 CVHAGSLEIGHECLALMVAYN------VMPSLKHYTCMVDLLSRAGQLYEAYELIKNL-- 567
Query: 301 KMKEDGFEPNVYTWNAM 317
E + TWNA+
Sbjct: 568 -----PTEADAVTWNAL 579
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 84/204 (41%), Gaps = 29/204 (14%)
Query: 330 PDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLA 389
P T IL +C S GKQ+HA++I+ G+++ + T L+ MYA+ S ++A
Sbjct: 49 PSSTTYASILDSCGSPIL---GKQLHAHSIKSGFNAHEFVTTKLLQMYARNCSFENACHV 105
Query: 390 YKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRP--DHISFLSALSACV--- 444
+ + +L S A+L Y G +E F ++L G R D F L C
Sbjct: 106 FDTMPLRNLHSWTALLRVYIEMGFFEEAFFLFEQLLYEGVRVRLDFFVFPVVLKICCGLC 165
Query: 445 --------------HAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEF 490
H G +K+ E F + + S Y M+ G L +A E
Sbjct: 166 AVELGRQMHGMALKHDGDMKSAFEMFSRFS----RKSAASYNAMIAGYWENGNLFKAKEL 221
Query: 491 IKKIP---MAPDSVMWGALLGGCV 511
++ + D + W +++ G V
Sbjct: 222 FDRMEQEGVQKDRISWNSMISGYV 245
>gi|255549182|ref|XP_002515645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545188|gb|EEF46697.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 758
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 236/443 (53%), Positives = 299/443 (67%), Gaps = 56/443 (12%)
Query: 45 CLERMSSLDNETP--NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLP 102
CLE L + P NL SW A++ + +G +EA + + E +E V
Sbjct: 114 CLECAHLLFDSVPLRNLHSWLAILNVYFDHGLFDEAFSLFQELLFEDIELEFFAFPLVFK 173
Query: 103 ACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVS 162
C+ L + LG++ H V +RCGDM +A+KIFS+FS++NEVS
Sbjct: 174 ICSGLGMVELGRQLHAM------------------VMKRCGDMDNAVKIFSRFSLRNEVS 215
Query: 163 CNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLL 222
NT+IVGYC G+V++A+E FDQME GV+R ISWNSMISGYVDN ++DEA +MFR+LL
Sbjct: 216 YNTMIVGYCAIGDVSKAKEFFDQMEVSGVKRERISWNSMISGYVDNFMFDEALNMFRNLL 275
Query: 223 MRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDL 282
++GIEP SFT GSVL ACAD SLR+GKEIH+ AI LQS+TFVGGAL+EMY + QD
Sbjct: 276 -KEGIEPDSFTLGSVLTACADTASLRQGKEIHSYAIVKSLQSNTFVGGALIEMYSKCQDP 334
Query: 283 VAAQMAFDEI---------------------ENIENLLGKMKEDGFEPNVYTWN------ 315
+AAQ+ F+E+ E I NLL KM+EDGFEPN+YTWN
Sbjct: 335 MAAQLVFNEVIERDAPTWNVLISCYARCNQNEEIRNLLQKMQEDGFEPNIYTWNGILAGY 394
Query: 316 --------AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDV 367
AMQLFSEM + D+ PDI+TVGIIL ACS LAT+ERGKQVHA++IRC YDSDV
Sbjct: 395 VENGHLDLAMQLFSEMHTGDVRPDIFTVGIILPACSKLATLERGKQVHAHSIRCYYDSDV 454
Query: 368 HIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILAS 427
HIG LVDMYAKCGSL++A+LAY RIS +LV N MLTAYAMHG+G+EGIA FR I A+
Sbjct: 455 HIGAGLVDMYAKCGSLQYAQLAYSRISNHNLVCHNVMLTAYAMHGYGEEGIALFRTIRAT 514
Query: 428 GFRPDHISFLSALSACVHAGSIK 450
GF+PD+++FLS L++CVHAG ++
Sbjct: 515 GFQPDNVTFLSVLASCVHAGLVE 537
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 108/349 (30%), Positives = 181/349 (51%), Gaps = 6/349 (1%)
Query: 4 KCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERM--SSLDNETPNLVS 61
+CG +D+A K+F R+ VS+N+++ A G V +A E ++M S + E +S
Sbjct: 194 RCGDMDNAVKIFSRFSLRNEVSYNTMIVGYCAIGDVSKAKEFFDQMEVSGVKRER---IS 250
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W+++I G+ N +EA+ M + EG+EP++ TL SVL ACA L GKE H Y
Sbjct: 251 WNSMISGYVDNFMFDEALNMFRNLLKEGIEPDSFTLGSVLTACADTASLRQGKEIHSYAI 310
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
SN FV L+++Y +C D ++A +F++ ++ + N +I Y E R
Sbjct: 311 VKSLQSNTFVGGALIEMYSKCQDPMAAQLVFNEVIERDAPTWNVLISCYARCNQNEEIRN 370
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
L +M+ G + I +WN +++GYV+N D A +F ++ D + P FT G +L AC
Sbjct: 371 LLQKMQEDGFEPNIYTWNGILAGYVENGHLDLAMQLFSEMHTGD-VRPDIFTVGIILPAC 429
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK 301
+ + +L +GK++HA +I SD +G LV+MY + L AQ+A+ I N +
Sbjct: 430 SKLATLERGKQVHAHSIRCYYDSDVHIGAGLVDMYAKCGSLQYAQLAYSRISNHNLVCHN 489
Query: 302 MKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMER 350
+ + + Y + LF + + PD T +L++C +E
Sbjct: 490 VMLTAYAMHGYGEEGIALFRTIRATGFQPDNVTFLSVLASCVHAGLVEH 538
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/454 (23%), Positives = 198/454 (43%), Gaps = 59/454 (12%)
Query: 93 NARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIF 152
N+ +SVL +C +LG + H + + GF + FV L+ +Y + G + A +F
Sbjct: 66 NSTGYASVLDSC---NSQNLGTQVHAHAIKTGFHCHDFVQTKLLQMYAKFGCLECAHLLF 122
Query: 153 SKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYD 212
++N + SW ++++ Y D+ L+D
Sbjct: 123 DSVPLRN-----------------------------------LHSWLAILNVYFDHGLFD 147
Query: 213 EAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVG--- 269
EAFS+F++LL D IE F F V C+ + + G+++HA+ + D V
Sbjct: 148 EAFSLFQELLFED-IELEFFAFPLVFKICSGLGMVELGRQLHAMVMKRCGDMDNAVKIFS 206
Query: 270 ----------GALVEMYCRYQDLVAAQMAFDEIE----NIENLLGKMKEDGFEPNVYTWN 315
++ YC D+ A+ FD++E E + G+ N
Sbjct: 207 RFSLRNEVSYNTMIVGYCAIGDVSKAKEFFDQMEVSGVKRERISWNSMISGYVDNFMFDE 266
Query: 316 AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVD 375
A+ +F +L + PD +T+G +L+AC+ A++ +GK++H+YAI S+ +G AL++
Sbjct: 267 ALNMFRNLLKEGIEPDSFTLGSVLTACADTASLRQGKEIHSYAIVKSLQSNTFVGGALIE 326
Query: 376 MYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHIS 435
MY+KC A+L + + D + N +++ YA +E +++ GF P+ +
Sbjct: 327 MYSKCQDPMAAQLVFNEVIERDAPTWNVLISCYARCNQNEEIRNLLQKMQEDGFEPNIYT 386
Query: 436 FLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGEL---GEAYEFIK 492
+ L+ V G + + F M DV+P + ++ S+ L + +
Sbjct: 387 WNGILAGYVENGHLDLAMQLFSEMHTGDVRPDIFTVGIILPACSKLATLERGKQVHAHSI 446
Query: 493 KIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRL 526
+ D + L+ G+L++ Q+A R+
Sbjct: 447 RCYYDSDVHIGAGLVDMYAKCGSLQYAQLAYSRI 480
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 107/213 (50%), Gaps = 1/213 (0%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC A+ VF + ERD +WN +++ A E L++M D PN+
Sbjct: 327 MYSKCQDPMAAQLVFNEVIERDAPTWNVLISCYARCNQNEEIRNLLQKMQE-DGFEPNIY 385
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+ ++ G+ +NG+ + A+ + M + P+ T+ +LPAC++L L GK+ H +
Sbjct: 386 TWNGILAGYVENGHLDLAMQLFSEMHTGDVRPDIFTVGIILPACSKLATLERGKQVHAHS 445
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R + S+ + GLVD+Y +CG + A +S+ S N V N ++ Y +G E
Sbjct: 446 IRCYYDSDVHIGAGLVDMYAKCGSLQYAQLAYSRISNHNLVCHNVMLTAYAMHGYGEEGI 505
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDE 213
LF + G Q +++ S+++ V L +
Sbjct: 506 ALFRTIRATGFQPDNVTFLSVLASCVHAGLVEH 538
>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 227/602 (37%), Positives = 345/602 (57%), Gaps = 73/602 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGSL++A++VF MP+RD +V
Sbjct: 164 MYTKCGSLENARQVFDRMPKRD------------------------------------VV 187
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A+I G++QNG EA+ + MQ G++PN+ TL SV+P CA L L GK+ H Y
Sbjct: 188 SWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYA 247
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R+G S+ VVNGLV++Y +CG NV A
Sbjct: 248 IRSGIESDVLVVNGLVNMYAKCG-------------------------------NVNTAH 276
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+LF++M R + SWN++I GY NS + EA + F + +R GI+P S T SVL A
Sbjct: 277 KLFERMP----IRDVASWNAIIGGYSLNSQHHEALAFFNRMQVR-GIKPNSITMVSVLPA 331
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA + +L +G++IH AI G +S+ VG ALV MY + ++ +A F+ + +
Sbjct: 332 CAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPKKNVVAW 391
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G+ + + A+ LF EM + + PD + + +L AC+ +E+GKQ+H Y IR
Sbjct: 392 NAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIR 451
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
G++S+V +GT LVD+YAKCG++ A+ ++R+ D+VS M+ AY +HGHG++ +A
Sbjct: 452 SGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHGHGEDALAL 511
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMVDLLS 479
F ++ +G + DHI+F + L+AC HAG + G ++F M + Y + P L+HY C+VDLL
Sbjct: 512 FSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQYFQCMKSDYGLAPKLEHYACLVDLLG 571
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
RAG L EA IK + + PD+ +WGALLG C H N+E G+ AA L EL+P+N G YV+
Sbjct: 572 RAGHLDEANGIIKNMSLEPDANVWGALLGACRIHCNIELGEQAAKHLFELDPDNAGYYVL 631
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTI 599
L+N++A A RW D+A+ R+ MK++ + K PGCS + ++ F DR+H +SE+IY +
Sbjct: 632 LSNIYAEAQRWEDVAKLRKMMKEKGVKKQPGCSVVAVHRDVQTFLVGDRTHPQSEQIYAM 691
Query: 600 ID 601
++
Sbjct: 692 LE 693
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 172/331 (51%), Gaps = 2/331 (0%)
Query: 185 QMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADM 244
Q ++ + W I GYV N +++A ++ + R GI P F SV+ AC
Sbjct: 75 QFTQTDIRNNAVVWKETIIGYVKNGFWNKALRLYYQM-QRTGINPDKLVFLSVIKACGSQ 133
Query: 245 NSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKE 304
+ L+ G+++H IA G +SD VG AL MY + L A+ FD + + +
Sbjct: 134 SDLQAGRKVHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAII 193
Query: 305 DGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYD 364
G+ N + A+ LFSEM + P+ T+ ++ C+ L +E+GKQ+H YAIR G +
Sbjct: 194 AGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIE 253
Query: 365 SDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRI 424
SDV + LV+MYAKCG++ A ++R+ D+ S NA++ Y+++ E +A F R+
Sbjct: 254 SDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRM 313
Query: 425 LASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGEL 484
G +P+ I+ +S L AC H +++ G + + + +V++ ++ G +
Sbjct: 314 QVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNV 373
Query: 485 GEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
AY+ +++P + V W A++ G HG+
Sbjct: 374 NSAYKLFERMP-KKNVVAWNAIISGYSQHGH 403
>gi|356551964|ref|XP_003544342.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 551
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 237/440 (53%), Positives = 293/440 (66%), Gaps = 56/440 (12%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNAR--TLSSVLPACARLQKLSLGKE 115
NL SW+A++ + + G+ EEA + ++ EG+ VL C L + LG++
Sbjct: 113 NLHSWTALLRVYIEMGFFEEAFFLFEQLLYEGVRVRLDFFVFPVVLKICCGLCAVELGRQ 172
Query: 116 FHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGN 175
HG ++ GDM SA ++FS+FS K+ S N +I GY ENGN
Sbjct: 173 MHGMALKHD------------------GDMKSAFEMFSRFSRKSAASYNAMIAGYWENGN 214
Query: 176 VAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFG 235
+ +A+ELFD+ME GVQ+ ISWNSMISGYVD SL+DEA+S+FRDLL ++GIEP SFT G
Sbjct: 215 LFKAKELFDRMEQEGVQKDRISWNSMISGYVDGSLFDEAYSLFRDLL-KEGIEPDSFTLG 273
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFD----- 290
SVL CADM S+R+GKE H+LAI GLQS++ VGGALVEMY + QD+VAAQMAFD
Sbjct: 274 SVLAGCADMASIRRGKEAHSLAIVRGLQSNSIVGGALVEMYSKCQDIVAAQMAFDGVSER 333
Query: 291 ----------------EIENIENLLGKMKEDGFEPNVYTWN--------------AMQLF 320
+ E I L KM+ DGFEPNVYTWN AMQLF
Sbjct: 334 DLPTWNALISGYARCNQAEKIRELHQKMRRDGFEPNVYTWNGIIAGYVENKQYDSAMQLF 393
Query: 321 SEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKC 380
+EM +L PDIYTVGIIL+ACS LAT++RGKQVHAY+IR G+DSDVHIG ALVDMYAKC
Sbjct: 394 TEMQIANLRPDIYTVGIILAACSRLATIQRGKQVHAYSIRAGHDSDVHIGAALVDMYAKC 453
Query: 381 GSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSAL 440
G +KH Y IS P+LVS NAMLTAYAMHGHG+EGIA FRR+LAS RPDH++FL+ L
Sbjct: 454 GDVKHCYRVYNMISNPNLVSHNAMLTAYAMHGHGEEGIALFRRMLASKVRPDHVTFLAVL 513
Query: 441 SACVHAGSIKTGSEFFDLMA 460
S+CVHAGS++ G E LMA
Sbjct: 514 SSCVHAGSLEIGHECLALMA 533
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 99/348 (28%), Positives = 178/348 (51%), Gaps = 2/348 (0%)
Query: 6 GSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAV 65
G + A ++F + S+N+++ NG + +A E +RM + + +SW+++
Sbjct: 182 GDMKSAFEMFSRFSRKSAASYNAMIAGYWENGNLFKAKELFDRMEQ-EGVQKDRISWNSM 240
Query: 66 IGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGF 125
I G+ +EA + + EG+EP++ TL SVL CA + + GKE H G
Sbjct: 241 ISGYVDGSLFDEAYSLFRDLLKEGIEPDSFTLGSVLAGCADMASIRRGKEAHSLAIVRGL 300
Query: 126 MSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQ 185
SN V LV++Y +C D+++A F S ++ + N +I GY + REL +
Sbjct: 301 QSNSIVGGALVEMYSKCQDIVAAQMAFDGVSERDLPTWNALISGYARCNQAEKIRELHQK 360
Query: 186 MEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMN 245
M G + + +WN +I+GYV+N YD A +F ++ + + + P +T G +L AC+ +
Sbjct: 361 MRRDGFEPNVYTWNGIIAGYVENKQYDSAMQLFTEMQIAN-LRPDIYTVGIILAACSRLA 419
Query: 246 SLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKED 305
++++GK++HA +I G SD +G ALV+MY + D+ ++ I N +
Sbjct: 420 TIQRGKQVHAYSIRAGHDSDVHIGAALVDMYAKCGDVKHCYRVYNMISNPNLVSHNAMLT 479
Query: 306 GFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ 353
+ + + + LF ML+ + PD T +LS+C ++E G +
Sbjct: 480 AYAMHGHGEEGIALFRRMLASKVRPDHVTFLAVLSSCVHAGSLEIGHE 527
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 182/399 (45%), Gaps = 64/399 (16%)
Query: 92 PNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKI 151
P++ T +S+L +C LGK+ H + ++GF ++ FV L+ +Y R +A +
Sbjct: 49 PSSTTYASILDSCG---SPILGKQLHAHSIKSGFNAHEFVTTKLLQMYARNCSFENACHV 105
Query: 152 FSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLY 211
F ++N S ++ Y E G EA LF+Q+ + GV+
Sbjct: 106 FDTMPLRNLHSWTALLRVYIEMGFFEEAFFLFEQLLYEGVR------------------- 146
Query: 212 DEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGA 271
+ F F VL C + ++ G+++H +A L+ D + A
Sbjct: 147 ---------------VRLDFFVFPVVLKICCGLCAVELGRQMHGMA----LKHDGDMKSA 187
Query: 272 LVEMYCR--------YQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAM------ 317
EM+ R Y ++A + + L +M+++G + + +WN+M
Sbjct: 188 F-EMFSRFSRKSAASYNAMIAGYWENGNLFKAKELFDRMEQEGVQKDRISWNSMISGYVD 246
Query: 318 --------QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHI 369
LF ++L + PD +T+G +L+ C+ +A++ RGK+ H+ AI G S+ +
Sbjct: 247 GSLFDEAYSLFRDLLKEGIEPDSFTLGSVLAGCADMASIRRGKEAHSLAIVRGLQSNSIV 306
Query: 370 GTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGF 429
G ALV+MY+KC + A++A+ +S DL + NA+++ YA ++ +++ GF
Sbjct: 307 GGALVEMYSKCQDIVAAQMAFDGVSERDLPTWNALISGYARCNQAEKIRELHQKMRRDGF 366
Query: 430 RPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSL 468
P+ ++ ++ V + + F M +++P +
Sbjct: 367 EPNVYTWNGIIAGYVENKQYDSAMQLFTEMQIANLRPDI 405
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 113/256 (44%), Gaps = 37/256 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC + A+ F + ERD +WN++++ A + E ++M D PN+
Sbjct: 313 MYSKCQDIVAAQMAFDGVSERDLPTWNALISGYARCNQAEKIRELHQKMRR-DGFEPNVY 371
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+ +I G+ +N + A+ + MQ L P+ T+ +L AC+RL + GK+ H Y
Sbjct: 372 TWNGIIAGYVENKQYDSAMQLFTEMQIANLRPDIYTVGIILAACSRLATIQRGKQVHAYS 431
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R G S+ + LVD+Y +CGD+ ++++ S N VS N ++ Y +G+ E
Sbjct: 432 IRAGHDSDVHIGAALVDMYAKCGDVKHCYRVYNMISNPNLVSHNAMLTAYAMHGHGEEGI 491
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LF +M + + P TF +VL +
Sbjct: 492 ALFRRM------------------------------------LASKVRPDHVTFLAVLSS 515
Query: 241 CADMNSLRKGKEIHAL 256
C SL G E AL
Sbjct: 516 CVHAGSLEIGHECLAL 531
>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 748
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 215/602 (35%), Positives = 366/602 (60%), Gaps = 17/602 (2%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y K GS+ A KVF MP + SWN++++A + G V E + M D VS
Sbjct: 54 YAKLGSIPYACKVFDQMPHPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDG-----VS 108
Query: 62 WSAVIGGFTQNGYDEEAIGML-FRMQAEG-LEPNARTLSSVLPACARLQKLSLGKEFHGY 119
W+++I G+ G +++ ++ +G N T S++L ++ + LG++ HG+
Sbjct: 109 WNSLISGYAGCGLIYQSVKAYNLMLKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGH 168
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ + GFMS FV + LVD+Y + G + A K+F + KN V NT+I+G G V ++
Sbjct: 169 VVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDS 228
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
+ LF +M +R ISW SMI+G+ N L +A +FR++ + + ++ +TFGSVL
Sbjct: 229 KRLFFEMR----ERDSISWTSMITGFTQNGLDRDAIDIFREMKL-ENLQMDQYTFGSVLT 283
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI--ENIEN 297
AC + +L++GK++HA I + + FV ALV+MYC+ +++ +A+ F ++ +N+ +
Sbjct: 284 ACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVDMYCKCKNIKSAEAVFKKMTCKNVVS 343
Query: 298 LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAY 357
+ G+ N Y+ A++ FS+M + PD +T+G ++S+C++LA++E G Q HA
Sbjct: 344 WTAMLV--GYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQFHAR 401
Query: 358 AIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEG 417
A+ G S + + ALV +Y KCGS++ + + IS D V+ A+++ YA G E
Sbjct: 402 ALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANET 461
Query: 418 IAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFD-LMAYYDVKPSLKHYTCMVD 476
I F +LA G +PD ++F+ LSAC AG ++ G++ F+ ++ + + P HYTCM+D
Sbjct: 462 IGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFESMINEHGIVPIQDHYTCMID 521
Query: 477 LLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGN 536
L SRAG + EA FI K+P +PD++ W LL C +GN++ G+ AA+ L+EL+P+NT +
Sbjct: 522 LFSRAGRIEEARNFINKMPFSPDAISWATLLSSCRFYGNMDIGKWAAEFLMELDPHNTAS 581
Query: 537 YVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEI 596
YV+L++++A G+W ++AR R+ M+D+ + K PGCSWI+ ++++H F A D+S+ S++I
Sbjct: 582 YVLLSSVYAAKGKWEEVARLRKDMRDKGLRKEPGCSWIKYKNQVHVFSADDKSNPFSDQI 641
Query: 597 YT 598
Y+
Sbjct: 642 YS 643
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 128/448 (28%), Positives = 211/448 (47%), Gaps = 37/448 (8%)
Query: 99 SVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIK 158
++L C + K H +I + F++N L+ Y + G + A K+F +
Sbjct: 14 ALLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMPHP 73
Query: 159 NEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMF 218
N S NTI+ Y + G V+E LFD M +R +SWNS+ISGY L ++ +
Sbjct: 74 NLYSWNTILSAYSKLGRVSEMEYLFDAMP----RRDGVSWNSLISGYAGCGLIYQSVKAY 129
Query: 219 RDLLMRDG-IEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYC 277
+L DG TF ++LI + ++ G++IH + G S FVG LV+MY
Sbjct: 130 NLMLKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYS 189
Query: 278 RYQDLVAAQMAFDE---------------------IENIENLLGKMKE----------DG 306
+ + A+ FDE +E+ + L +M+E G
Sbjct: 190 KMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITG 249
Query: 307 FEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSD 366
F N +A+ +F EM +L D YT G +L+AC + ++ GKQVHAY IR Y +
Sbjct: 250 FTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDN 309
Query: 367 VHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILA 426
+ + +ALVDMY KC ++K A +K+++ ++VS AML Y +G+ +E + F +
Sbjct: 310 IFVASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQK 369
Query: 427 SGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGE 486
G PD + S +S+C + S++ G++F + + +V L + G + +
Sbjct: 370 YGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIED 429
Query: 487 AYEFIKKIPMAPDSVMWGALLGGCVSHG 514
++ +I D V W AL+ G G
Sbjct: 430 SHRLFNEISFK-DEVTWTALVSGYAQFG 456
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 126/415 (30%), Positives = 201/415 (48%), Gaps = 43/415 (10%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G + A+KVF +PE++ V +N+++ G V ++ M D+ +
Sbjct: 187 MYSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDS-----I 241
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+++I GFTQNG D +AI + M+ E L+ + T SVL AC + L GK+ H YI
Sbjct: 242 SWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYI 301
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R + N FV + LVD+Y +C ++ SA +F K + KN VS ++VGY +NG EA
Sbjct: 302 IRTDYKDNIFVASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAV 361
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+ F M+ + GIEP FT GSV+ +
Sbjct: 362 KTFSDMQ------------------------------------KYGIEPDDFTLGSVISS 385
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA++ SL +G + HA A+ GL S V ALV +Y + + + F+EI + +
Sbjct: 386 CANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVTW 445
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI- 359
G+ + LF ML+ L PD T +LSACS +E+G Q+ I
Sbjct: 446 TALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFESMIN 505
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNAMLTAYAMHGH 413
G T ++D++++ G ++ AR ++ +PD +S +L++ +G+
Sbjct: 506 EHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWATLLSSCRFYGN 560
>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 972
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 216/577 (37%), Positives = 333/577 (57%), Gaps = 3/577 (0%)
Query: 22 DCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGM 81
D V+WN++++ A +G EA + M L + PN+VSW+A+I G QNGYD EA+ +
Sbjct: 290 DQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSV 349
Query: 82 LFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY-ITRNGFMSNPFVVNGLVDVYR 140
+M EG++PN+ T++S + AC L L G+E HGY I S+ V N LVD Y
Sbjct: 350 FRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYA 409
Query: 141 RCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNS 200
+C + A + F + VS N ++ GY G+ EA EL +M+ G++ II+WN
Sbjct: 410 KCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNG 469
Query: 201 MISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIAL 260
+++G+ A F+ + G++P + T L AC + +L+ GKEIH +
Sbjct: 470 LVTGFTQYGDGKAALEFFQRM-HSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRN 528
Query: 261 GLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLF 320
++ T VG AL+ MY L A F E+ + ++ + + NA+ L
Sbjct: 529 HIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLL 588
Query: 321 SEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKC 380
EM ++ + T+ L ACS LA + +GK++H + IRCG D+ I +L+DMY +C
Sbjct: 589 REMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRC 648
Query: 381 GSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSAL 440
GS++ +R + + DLVS N M++ Y MHG G + + F++ G +P+HI+F + L
Sbjct: 649 GSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLL 708
Query: 441 SACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPD 499
SAC H+G I+ G ++F +M Y + P+++ Y CMVDLLSRAG+ E EFI+K+P P+
Sbjct: 709 SACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPN 768
Query: 500 SVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQK 559
+ +WG+LLG C H N + + AA L ELEP ++GNYV++AN+++ AGRW D A+ R
Sbjct: 769 AAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCL 828
Query: 560 MKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEI 596
MK+R + K PGCSWIE + ++H F D SH E+I
Sbjct: 829 MKERGVTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQI 865
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 149/622 (23%), Positives = 268/622 (43%), Gaps = 122/622 (19%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y + G ++DA+++F M ER+ S
Sbjct: 133 VYCQTGCVEDARRMFDKMSERNVFS----------------------------------- 157
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
W+A++ + G EE I + + M EG+ P+ V AC+ L+ +GK+ + Y+
Sbjct: 158 -WTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYM 216
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
GF N V ++D++ +CG M A + F + K+ N ++ GY G +A
Sbjct: 217 LSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKAL 276
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYD---------------------------- 212
+ M+ GV+ ++WN++ISGY + ++
Sbjct: 277 KCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAG 336
Query: 213 --------EAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIAL-GLQ 263
EA S+FR +++ +G++P S T S + AC +++ LR G+EIH I + L
Sbjct: 337 SEQNGYDFEALSVFRKMVL-EGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELD 395
Query: 264 SDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE---------------------NLLGKM 302
SD VG +LV+ Y + + + A+ F I+ + LL +M
Sbjct: 396 SDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEM 455
Query: 303 KEDGFEPNVYTWN--------------AMQLFSEMLSLDLTPDIYTVGIILSACSSLATM 348
K G EP++ TWN A++ F M S+ + P+ T+ L+AC + +
Sbjct: 456 KFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNL 515
Query: 349 ERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAY 408
+ GK++H Y +R + +G+AL+ MY+ C SL+ A + +ST D+V N++++A
Sbjct: 516 KLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISAC 575
Query: 409 AMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSL 468
A G + R + S + ++ +SAL AC +++ G E + +
Sbjct: 576 AQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCN 635
Query: 469 KHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAAD---- 524
++D+ R G + ++ +P D V W ++ HG FG A +
Sbjct: 636 FILNSLIDMYGRCGSIQKSRRIFDLMPQR-DLVSWNVMISVYGMHG---FGMDAVNLFQQ 691
Query: 525 -RLIELEPNNTGNYVMLANLFA 545
R + L+P N++ NL +
Sbjct: 692 FRTMGLKP----NHITFTNLLS 709
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 111/412 (26%), Positives = 189/412 (45%), Gaps = 39/412 (9%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y KC S++ A++ F M+ + D VSWN+++ A G EA+E L M E P++++
Sbjct: 408 YAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIE-PDIIT 466
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W+ ++ GFTQ G + A+ RM + G++PN T+S L AC +++ L LGKE HGY+
Sbjct: 467 WNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVL 526
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
RN + V + L+ +Y C + A +FS+ S ++ V N+II ++G A +
Sbjct: 527 RNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALD 586
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
L +M +E + T S L AC
Sbjct: 587 LLREMN------------------------------------LSNVEVNTVTMVSALPAC 610
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK 301
+ + +LR+GKEIH I GL + F+ +L++MY R + ++ FD + + +
Sbjct: 611 SKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWN 670
Query: 302 MKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG-KQVHAYAIR 360
+ + + + +A+ LF + ++ L P+ T +LSACS +E G K
Sbjct: 671 VMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTE 730
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHA-RLAYKRISTPDLVSQNAMLTAYAMH 411
D V +VD+ ++ G K P+ ++L A +H
Sbjct: 731 YAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIH 782
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 115/473 (24%), Positives = 196/473 (41%), Gaps = 108/473 (22%)
Query: 67 GGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFM 126
G +NG A +L M + +S+L C +L L LG + H + NG
Sbjct: 62 GSVHRNGVLNNAAMLLSSMDLTNPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVD 121
Query: 127 SNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQM 186
F+ + L++VY + G + A ++F K S +N S I+ YC G+
Sbjct: 122 VCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGD----------- 170
Query: 187 EHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNS 246
Y+E +F L++ +G+ P F F V AC+++ +
Sbjct: 171 ------------------------YEETIKLFY-LMVNEGVRPDHFVFPKVFKACSELKN 205
Query: 247 LRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE-------NIE--- 296
R GK+++ +++G + ++ V G++++M+ + + A+ F+EIE NI
Sbjct: 206 YRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSG 265
Query: 297 -----------NLLGKMKEDGFEPNVYTWN------------------------------ 315
+ MK G +P+ TWN
Sbjct: 266 YTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKP 325
Query: 316 --------------------AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVH 355
A+ +F +M+ + P+ T+ +SAC++L+ + G+++H
Sbjct: 326 NVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIH 385
Query: 356 AYAIRC-GYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHG 414
Y I+ DSD+ +G +LVD YAKC S++ AR + I DLVS NAML YA+ G
Sbjct: 386 GYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSH 445
Query: 415 KEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPS 467
+E I + G PD I++ ++ G K EFF M + P+
Sbjct: 446 EEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPN 498
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 121/273 (44%), Gaps = 68/273 (24%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY C SL+ A VF + RD V WNS+++ACA +G + AL+ L M +L N
Sbjct: 543 MYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREM-NLSN------ 595
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+E N T+ S LPAC++L L GKE H +I
Sbjct: 596 -----------------------------VEVNTVTMVSALPACSKLAALRQGKEIHQFI 626
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R G + F++N L+D+Y RCG + + +IF ++ VS N +I Y +G +A
Sbjct: 627 IRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAV 686
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFR-------------------DL 221
LF Q +G++ I++ +++S + L +E + F+ DL
Sbjct: 687 NLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDL 746
Query: 222 LMRDG-------------IEPTSFTFGSVLIAC 241
L R G EP + +GS+L AC
Sbjct: 747 LSRAGQFNETLEFIEKMPFEPNAAVWGSLLGAC 779
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 121/264 (45%), Gaps = 10/264 (3%)
Query: 315 NAMQLFSEMLSLDLT-PD--IYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGT 371
NA L S S+DLT PD I IL C L + G QVHA + G D +G+
Sbjct: 72 NAAMLLS---SMDLTNPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGS 128
Query: 372 ALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRP 431
L+++Y + G ++ AR + ++S ++ S A++ Y G +E I F ++ G RP
Sbjct: 129 RLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRP 188
Query: 432 DHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFI 491
DH F AC + + G + +D M + + ++D+ + G + A F
Sbjct: 189 DHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFF 248
Query: 492 KKIPMAPDSVMWGALLGGCVSHGNLE--FGQIAADRLIELEPNNTGNYVMLANLFAYAGR 549
++I D MW ++ G S G + I+ +L ++P+ +++ +A +G+
Sbjct: 249 EEIEF-KDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISG-YAQSGQ 306
Query: 550 WSDLARTRQKMKDRRMHKSPGCSW 573
+ + ++ +M + K SW
Sbjct: 307 FEEASKYFLEMGGLKDFKPNVVSW 330
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 96/197 (48%), Gaps = 8/197 (4%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYG+CGS+ ++++F +MP+RD VSWN +++ +G ++A+ ++ ++ + PN +
Sbjct: 644 MYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLK-PNHI 702
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
+++ ++ + +G EE M+ E ++P + ++ +R + + EF
Sbjct: 703 TFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEF--- 759
Query: 120 ITRNGFMSNPFVVNGLVDVYR-RCGDMLSALKIFSKFSIKNEVSCNTIIVG--YCENGNV 176
I + F N V L+ R C L+ F ++ + S N +++ Y G
Sbjct: 760 IEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRW 819
Query: 177 AEARELFDQMEHLGVQR 193
+A ++ M+ GV +
Sbjct: 820 EDAAKIRCLMKERGVTK 836
>gi|147767942|emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]
Length = 929
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 216/577 (37%), Positives = 332/577 (57%), Gaps = 3/577 (0%)
Query: 22 DCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGM 81
D V+WN++++ A +G EA + M L + PN+VSW+A+I G QNGYD EA+ +
Sbjct: 290 DQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSV 349
Query: 82 LFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY-ITRNGFMSNPFVVNGLVDVYR 140
+M EG++PN+ T++S + AC L L G+E HGY I S+ V N LVD Y
Sbjct: 350 FRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYA 409
Query: 141 RCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNS 200
+C + A + F + VS N ++ GY G+ EA EL +M+ G++ II+WN
Sbjct: 410 KCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNG 469
Query: 201 MISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIAL 260
+++G+ A F+ + G++P + T L AC + +L+ GKEIH +
Sbjct: 470 LVTGFTQYGDGKAALEFFQRM-HSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRN 528
Query: 261 GLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLF 320
++ T VG AL+ MY L A F E+ + ++ + + NA+ L
Sbjct: 529 HIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLL 588
Query: 321 SEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKC 380
EM ++ + T+ L ACS LA + +GK++H + IRCG D+ I +L+DMY +C
Sbjct: 589 REMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRC 648
Query: 381 GSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSAL 440
GS++ +R + + DLVS N M++ Y MHG G + + F+ G +P+HI+F + L
Sbjct: 649 GSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQXFRTMGLKPNHITFTNLL 708
Query: 441 SACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPD 499
SAC H+G I+ G ++F +M Y + P+++ Y CMVDLLSRAG+ E EFI+K+P P+
Sbjct: 709 SACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPN 768
Query: 500 SVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQK 559
+ +WG+LLG C H N + + AA L ELEP ++GNYV++AN+++ AGRW D A+ R
Sbjct: 769 AAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCL 828
Query: 560 MKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEI 596
MK+R + K PGCSWIE + ++H F D SH E+I
Sbjct: 829 MKERGVTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQI 865
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 149/622 (23%), Positives = 268/622 (43%), Gaps = 122/622 (19%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y + G ++DA+++F M ER+ S
Sbjct: 133 VYCQTGCVEDARRMFDKMSERNVFS----------------------------------- 157
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
W+A++ + G EE I + + M EG+ P+ V AC+ L+ +GK+ + Y+
Sbjct: 158 -WTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYM 216
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
GF N V ++D++ +CG M A + F + K+ N ++ GY G +A
Sbjct: 217 LSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKAL 276
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYD---------------------------- 212
+ M+ GV+ ++WN++ISGY + ++
Sbjct: 277 KCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAG 336
Query: 213 --------EAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIAL-GLQ 263
EA S+FR +++ +G++P S T S + AC +++ LR G+EIH I + L
Sbjct: 337 SEQNGYDFEALSVFRKMVL-EGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELD 395
Query: 264 SDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE---------------------NLLGKM 302
SD VG +LV+ Y + + + A+ F I+ + LL +M
Sbjct: 396 SDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEM 455
Query: 303 KEDGFEPNVYTWN--------------AMQLFSEMLSLDLTPDIYTVGIILSACSSLATM 348
K G EP++ TWN A++ F M S+ + P+ T+ L+AC + +
Sbjct: 456 KFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNL 515
Query: 349 ERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAY 408
+ GK++H Y +R + +G+AL+ MY+ C SL+ A + +ST D+V N++++A
Sbjct: 516 KLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISAC 575
Query: 409 AMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSL 468
A G + R + S + ++ +SAL AC +++ G E + +
Sbjct: 576 AQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCN 635
Query: 469 KHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAAD---- 524
++D+ R G + ++ +P D V W ++ HG FG A +
Sbjct: 636 FILNSLIDMYGRCGSIQKSRRIFDLMPQR-DLVSWNVMISVYGMHG---FGMDAVNLFQX 691
Query: 525 -RLIELEPNNTGNYVMLANLFA 545
R + L+P N++ NL +
Sbjct: 692 FRTMGLKP----NHITFTNLLS 709
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 111/412 (26%), Positives = 188/412 (45%), Gaps = 39/412 (9%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y KC S++ A++ F M+ + D VSWN+++ A G EA+E L M E P++++
Sbjct: 408 YAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIE-PDIIT 466
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W+ ++ GFTQ G + A+ RM + G++PN T+S L AC +++ L LGKE HGY+
Sbjct: 467 WNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVL 526
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
RN + V + L+ +Y C + A +FS+ S ++ V N+II ++G A +
Sbjct: 527 RNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALD 586
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
L +M +E + T S L AC
Sbjct: 587 LLREMN------------------------------------LSNVEVNTVTMVSALPAC 610
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK 301
+ + +LR+GKEIH I GL + F+ +L++MY R + ++ FD + + +
Sbjct: 611 SKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWN 670
Query: 302 MKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG-KQVHAYAIR 360
+ + + + +A+ LF ++ L P+ T +LSACS +E G K
Sbjct: 671 VMISVYGMHGFGMDAVNLFQXFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTE 730
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHA-RLAYKRISTPDLVSQNAMLTAYAMH 411
D V +VD+ ++ G K P+ ++L A +H
Sbjct: 731 YAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIH 782
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 115/473 (24%), Positives = 196/473 (41%), Gaps = 108/473 (22%)
Query: 67 GGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFM 126
G +NG A +L M + +S+L C +L L LG + H + NG
Sbjct: 62 GSVHRNGVLNNAAMLLSSMDLTNPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVD 121
Query: 127 SNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQM 186
F+ + L++VY + G + A ++F K S +N S I+ YC G+
Sbjct: 122 VCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGD----------- 170
Query: 187 EHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNS 246
Y+E +F L++ +G+ P F F V AC+++ +
Sbjct: 171 ------------------------YEETIKLFY-LMVNEGVRPDHFVFPKVFKACSELKN 205
Query: 247 LRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE-------NIE--- 296
R GK+++ +++G + ++ V G++++M+ + + A+ F+EIE NI
Sbjct: 206 YRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSG 265
Query: 297 -----------NLLGKMKEDGFEPNVYTWN------------------------------ 315
+ MK G +P+ TWN
Sbjct: 266 YTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKP 325
Query: 316 --------------------AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVH 355
A+ +F +M+ + P+ T+ +SAC++L+ + G+++H
Sbjct: 326 NVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIH 385
Query: 356 AYAIRC-GYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHG 414
Y I+ DSD+ +G +LVD YAKC S++ AR + I DLVS NAML YA+ G
Sbjct: 386 GYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSH 445
Query: 415 KEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPS 467
+E I + G PD I++ ++ G K EFF M + P+
Sbjct: 446 EEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPN 498
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 120/273 (43%), Gaps = 68/273 (24%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY C SL+ A VF + RD V WNS+++ACA +G + AL+ L M +L N
Sbjct: 543 MYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREM-NLSN------ 595
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+E N T+ S LPAC++L L GKE H +I
Sbjct: 596 -----------------------------VEVNTVTMVSALPACSKLAALRQGKEIHQFI 626
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R G + F++N L+D+Y RCG + + +IF ++ VS N +I Y +G +A
Sbjct: 627 IRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAV 686
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFR-------------------DL 221
LF +G++ I++ +++S + L +E + F+ DL
Sbjct: 687 NLFQXFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDL 746
Query: 222 LMRDG-------------IEPTSFTFGSVLIAC 241
L R G EP + +GS+L AC
Sbjct: 747 LSRAGQFNETLEFIEKMPFEPNAAVWGSLLGAC 779
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 121/264 (45%), Gaps = 10/264 (3%)
Query: 315 NAMQLFSEMLSLDLT-PD--IYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGT 371
NA L S S+DLT PD I IL C L + G QVHA + G D +G+
Sbjct: 72 NAAMLLS---SMDLTNPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGS 128
Query: 372 ALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRP 431
L+++Y + G ++ AR + ++S ++ S A++ Y G +E I F ++ G RP
Sbjct: 129 RLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRP 188
Query: 432 DHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFI 491
DH F AC + + G + +D M + + ++D+ + G + A F
Sbjct: 189 DHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFF 248
Query: 492 KKIPMAPDSVMWGALLGGCVSHGNLE--FGQIAADRLIELEPNNTGNYVMLANLFAYAGR 549
++I D MW ++ G S G + I+ +L ++P+ +++ +A +G+
Sbjct: 249 EEIEF-KDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISG-YAQSGQ 306
Query: 550 WSDLARTRQKMKDRRMHKSPGCSW 573
+ + ++ +M + K SW
Sbjct: 307 FEEASKYFLEMGGLKDFKPNVVSW 330
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 95/197 (48%), Gaps = 8/197 (4%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYG+CGS+ ++++F +MP+RD VSWN +++ +G ++A+ + ++ + PN +
Sbjct: 644 MYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQXFRTMGLK-PNHI 702
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
+++ ++ + +G EE M+ E ++P + ++ +R + + EF
Sbjct: 703 TFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEF--- 759
Query: 120 ITRNGFMSNPFVVNGLVDVYR-RCGDMLSALKIFSKFSIKNEVSCNTIIVG--YCENGNV 176
I + F N V L+ R C L+ F ++ + S N +++ Y G
Sbjct: 760 IEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRW 819
Query: 177 AEARELFDQMEHLGVQR 193
+A ++ M+ GV +
Sbjct: 820 EDAAKIRCLMKERGVTK 836
>gi|147838932|emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]
Length = 760
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 214/581 (36%), Positives = 332/581 (57%), Gaps = 37/581 (6%)
Query: 57 PNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEF 116
PN+ S+S +I F++ A+ +M GL P+ R L S + ACA L L ++
Sbjct: 77 PNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQV 136
Query: 117 HGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNV 176
HG + +GF S+ FV + LV +Y +C + A ++F + + VS + ++ Y G V
Sbjct: 137 HGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCV 196
Query: 177 AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGS 236
EA+ LF +M GVQ +ISWN MI+G+ + LY EA MF D+ +R G EP T S
Sbjct: 197 DEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLR-GFEPDGTTISS 255
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
VL A D+ L G IH I GL SD V AL++MY + FD++++++
Sbjct: 256 VLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMD 315
Query: 297 ---------------------NLLGKMKEDGFEPNVYTWNAM--------------QLFS 321
L ++K+ G E NV +W +M +LF
Sbjct: 316 VGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDMEALELFR 375
Query: 322 EMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCG 381
EM + P+ T+ +L AC ++A + GK H +++R G +DV++G+AL+DMYAKCG
Sbjct: 376 EMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCG 435
Query: 382 SLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALS 441
++ +R+ + I T +LV NA++ YAMHG KE + F + SG +PD ISF LS
Sbjct: 436 RIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLS 495
Query: 442 ACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDS 500
AC +G + GS +F+ M+ Y ++ ++HY CMV LLSRAG+L +AY I+++P+ PD+
Sbjct: 496 ACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDA 555
Query: 501 VMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKM 560
+WGALL C H N+ G++AA++L ELEP+N GNY++L+N++A G W+++ R R M
Sbjct: 556 CVWGALLSSCRVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMM 615
Query: 561 KDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
K++ + K+PGCSWIE ++++H A D+SH + +I +D
Sbjct: 616 KNKGLRKNPGCSWIEVKNKVHMLLAGDKSHPQMTQIIENLD 656
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 131/415 (31%), Positives = 212/415 (51%), Gaps = 4/415 (0%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC + DA +VF M E D VSW+++V A A G V EA M PNL+
Sbjct: 158 MYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGD-SGVQPNLI 216
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ +I GF +G EA+ M M G EP+ T+SSVLPA L+ L +G HGY+
Sbjct: 217 SWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYV 276
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G +S+ V + L+D+Y +C ++F + + SCN I G NG V +
Sbjct: 277 IKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSL 336
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LF Q++ G++ ++SW SMI+ N EA +FR++ + G++P S T +L A
Sbjct: 337 RLFRQLKDQGMELNVVSWTSMIACCSQNGRDMEALELFREMQIA-GVKPNSVTIPCLLPA 395
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C ++ +L GK H ++ G+ +D +VG AL++MY + + A+++ FD I +
Sbjct: 396 CGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVCW 455
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGK-QVHAYAI 359
G+ + AM++F M PDI + +LSACS E G ++ +
Sbjct: 456 NAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNSMSS 515
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST-PDLVSQNAMLTAYAMHGH 413
+ G ++ V +V + ++ G L+ A +R+ PD A+L++ +H +
Sbjct: 516 KYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSCRVHNN 570
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/401 (23%), Positives = 167/401 (41%), Gaps = 71/401 (17%)
Query: 110 LSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVG 169
LS ++ H +I + G ++ + A K+ S
Sbjct: 29 LSQTRQAHAHILKTGLFNDTHL----------------ATKLLSH--------------- 57
Query: 170 YCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEP 229
Y N A+A + D L + + S++++I + + A S F +L R G+ P
Sbjct: 58 YANNMCFADATLVLD----LVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTR-GLMP 112
Query: 230 TSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAF 289
+ S + ACA +++L+ +++H +A G SD+FV +LV MY + + A F
Sbjct: 113 DNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVF 172
Query: 290 DE---------------------IENIENLLGKMKEDGFEPNVYTWNAM-------QLFS 321
D ++ + L +M + G +PN+ +WN M L+S
Sbjct: 173 DRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYS 232
Query: 322 E--MLSLDL-----TPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALV 374
E ++ LD+ PD T+ +L A L + G +H Y I+ G SD + +AL+
Sbjct: 233 EAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALI 292
Query: 375 DMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHI 434
DMY KC + ++ D+ S NA + + +G + + FR++ G + +
Sbjct: 293 DMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVV 352
Query: 435 SFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMV 475
S+ S ++ C G E F M VKP+ C++
Sbjct: 353 SWTSMIACCSQNGRDMEALELFREMQIAGVKPNSVTIPCLL 393
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 103/216 (47%), Gaps = 28/216 (12%)
Query: 246 SLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKED 305
SL + ++ HA + GL +DT + L+ Y A + D +
Sbjct: 28 SLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVP------------ 75
Query: 306 GFEPNVYTW--------------NAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG 351
EPNV+++ +A+ FS+ML+ L PD + + AC+ L+ ++
Sbjct: 76 --EPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPA 133
Query: 352 KQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMH 411
+QVH A G+DSD + ++LV MY KC ++ A + R+ PD+VS +A++ AYA
Sbjct: 134 RQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQ 193
Query: 412 GHGKEGIAHFRRILASGFRPDHISFLSALSACVHAG 447
G E F + SG +P+ IS+ ++ H+G
Sbjct: 194 GCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSG 229
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 96/215 (44%), Gaps = 10/215 (4%)
Query: 343 SSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQN 402
S+ A++ + +Q HA+ ++ G +D H+ T L+ YA A L + P++ S +
Sbjct: 24 STTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFS 83
Query: 403 AMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYY 462
++ A++ ++ F ++L G PD+ SA+ AC ++K + + +
Sbjct: 84 TLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVS 143
Query: 463 DVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLG-----GCVSHGNLE 517
+ +V + + ++ +A+ ++ PD V W AL+ GCV
Sbjct: 144 GFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRM-FEPDVVSWSALVAAYARQGCVDEAKRL 202
Query: 518 FGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSD 552
F ++ ++PN M+A F ++G +S+
Sbjct: 203 FSEMGDS---GVQPNLISWNGMIAG-FNHSGLYSE 233
>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
Length = 758
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 214/581 (36%), Positives = 332/581 (57%), Gaps = 37/581 (6%)
Query: 57 PNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEF 116
PN+ S+S +I F++ A+ +M GL P+ R L S + ACA L L ++
Sbjct: 77 PNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQV 136
Query: 117 HGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNV 176
HG + +GF S+ FV + LV +Y +C + A ++F + + VS + ++ Y G V
Sbjct: 137 HGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCV 196
Query: 177 AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGS 236
EA+ LF +M GVQ +ISWN MI+G+ + LY EA MF D+ +R G EP T S
Sbjct: 197 DEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLR-GFEPDGTTISS 255
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
VL A D+ L G IH I GL SD V AL++MY + FD++++++
Sbjct: 256 VLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMD 315
Query: 297 ---------------------NLLGKMKEDGFEPNVYTWNAM--------------QLFS 321
L ++K+ G E NV +W +M +LF
Sbjct: 316 VGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFR 375
Query: 322 EMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCG 381
EM + P+ T+ +L AC ++A + GK H +++R G +DV++G+AL+DMYAKCG
Sbjct: 376 EMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCG 435
Query: 382 SLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALS 441
++ +R+ + I T +LV NA++ YAMHG KE + F + SG +PD ISF LS
Sbjct: 436 RIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLS 495
Query: 442 ACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDS 500
AC +G + GS +F+ M+ Y ++ ++HY CMV LLSRAG+L +AY I+++P+ PD+
Sbjct: 496 ACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDA 555
Query: 501 VMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKM 560
+WGALL C H N+ G++AA++L ELEP+N GNY++L+N++A G W+++ R R M
Sbjct: 556 CVWGALLSSCRVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMM 615
Query: 561 KDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
K++ + K+PGCSWIE ++++H A D+SH + +I +D
Sbjct: 616 KNKGLRKNPGCSWIEVKNKVHMLLAGDKSHPQMTQIIEKLD 656
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 131/415 (31%), Positives = 212/415 (51%), Gaps = 4/415 (0%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC + DA +VF M E D VSW+++V A A G V EA M PNL+
Sbjct: 158 MYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGD-SGVQPNLI 216
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ +I GF +G EA+ M M G EP+ T+SSVLPA L+ L +G HGY+
Sbjct: 217 SWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYV 276
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G +S+ V + L+D+Y +C ++F + + SCN I G NG V +
Sbjct: 277 IKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSL 336
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LF Q++ G++ ++SW SMI+ N EA +FR++ + G++P S T +L A
Sbjct: 337 RLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQIA-GVKPNSVTIPCLLPA 395
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C ++ +L GK H ++ G+ +D +VG AL++MY + + A+++ FD I +
Sbjct: 396 CGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVCW 455
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGK-QVHAYAI 359
G+ + AM++F M PDI + +LSACS E G ++ +
Sbjct: 456 NAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNSMSS 515
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST-PDLVSQNAMLTAYAMHGH 413
+ G ++ V +V + ++ G L+ A +R+ PD A+L++ +H +
Sbjct: 516 KYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSCRVHNN 570
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/401 (23%), Positives = 167/401 (41%), Gaps = 71/401 (17%)
Query: 110 LSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVG 169
LS ++ H +I + G ++ + A K+ S
Sbjct: 29 LSQTRQAHAHILKTGLFNDTHL----------------ATKLLSH--------------- 57
Query: 170 YCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEP 229
Y N A+A + D L + + S++++I + + A S F +L R G+ P
Sbjct: 58 YANNMCFADATLVLD----LVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTR-GLMP 112
Query: 230 TSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAF 289
+ S + ACA +++L+ +++H +A G SD+FV +LV MY + + A F
Sbjct: 113 DNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVF 172
Query: 290 DE---------------------IENIENLLGKMKEDGFEPNVYTWNAM-------QLFS 321
D ++ + L +M + G +PN+ +WN M L+S
Sbjct: 173 DRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYS 232
Query: 322 E--MLSLDL-----TPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALV 374
E ++ LD+ PD T+ +L A L + G +H Y I+ G SD + +AL+
Sbjct: 233 EAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALI 292
Query: 375 DMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHI 434
DMY KC + ++ D+ S NA + + +G + + FR++ G + +
Sbjct: 293 DMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVV 352
Query: 435 SFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMV 475
S+ S ++ C G E F M VKP+ C++
Sbjct: 353 SWTSMIACCSQNGRDIEALELFREMQIAGVKPNSVTIPCLL 393
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 105/209 (50%), Gaps = 14/209 (6%)
Query: 246 SLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKED 305
SL + ++ HA + GL +DT + L+ Y A M F + + +L+ +
Sbjct: 28 SLSQTRQAHAHILKTGLFNDTHLATKLLSHY-------ANNMCFADATLVLDLVPEPNVF 80
Query: 306 GFEPNVYTW-------NAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYA 358
F +Y + +A+ FS+ML+ L PD + + AC+ L+ ++ +QVH A
Sbjct: 81 SFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIA 140
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGI 418
G+DSD + ++LV MY KC ++ A + R+ PD+VS +A++ AYA G E
Sbjct: 141 SVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAK 200
Query: 419 AHFRRILASGFRPDHISFLSALSACVHAG 447
F + SG +P+ IS+ ++ H+G
Sbjct: 201 RLFSEMGDSGVQPNLISWNGMIAGFNHSG 229
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 96/215 (44%), Gaps = 10/215 (4%)
Query: 343 SSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQN 402
S+ A++ + +Q HA+ ++ G +D H+ T L+ YA A L + P++ S +
Sbjct: 24 STTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFS 83
Query: 403 AMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYY 462
++ A++ ++ F ++L G PD+ SA+ AC ++K + + +
Sbjct: 84 TLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVS 143
Query: 463 DVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLG-----GCVSHGNLE 517
+ +V + + ++ +A+ ++ PD V W AL+ GCV
Sbjct: 144 GFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRM-FEPDVVSWSALVAAYARQGCVDEAKRL 202
Query: 518 FGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSD 552
F ++ ++PN M+A F ++G +S+
Sbjct: 203 FSEMGDS---GVQPNLISWNGMIAG-FNHSGLYSE 233
>gi|449487256|ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 223/634 (35%), Positives = 355/634 (55%), Gaps = 44/634 (6%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y K GSL A VF MP + SWN++++ A G + L M D VS
Sbjct: 55 YAKTGSLRFAHHVFDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDP-----VS 109
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W+A+I G+ Q G + AI M +M +E + P+ T+S+VL +CA Q L +G++ H ++
Sbjct: 110 WTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVV 169
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
+ G S V L+++Y +CGD + A +F + ++KN + N +I Y ++G A
Sbjct: 170 KLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAAS 229
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
F++M R I+SWNSMISGY EA ++F +L ++P +FT S+L AC
Sbjct: 230 QFEKMP----DRDIVSWNSMISGYSQQGYNLEALAIFSKMLNEPSLKPDNFTLASILSAC 285
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQM-------------A 288
A++ L GK+IHA + ++ VG AL+ MY + + A++ A
Sbjct: 286 ANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIA 345
Query: 289 FDEIENIENLLGKMK--EDGF----EPNVYTWNAM--------------QLFSEMLSLDL 328
F + + LG +K + F + +V W AM +LF M++
Sbjct: 346 FTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGP 405
Query: 329 TPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARL 388
P+ YT+ +LS SSL +E GKQ+HA AI+ G S + AL+ MYAK G++ A+
Sbjct: 406 EPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKR 465
Query: 389 AYKRIS-TPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAG 447
+ + ++VS +M+ A A HG GKE I F R+L+ G +PDHI+++ LSAC H G
Sbjct: 466 VFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVG 525
Query: 448 SIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGAL 506
++ G +++++M ++++P+L HY CM+DL RAG L EAY FI+ +P+ PD++ WG+L
Sbjct: 526 LVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSL 585
Query: 507 LGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMH 566
L C H N + ++AA+RL+ ++P N+G Y+ LAN+++ G+W + A+TR+ MKDR +
Sbjct: 586 LASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSACGKWENAAQTRKLMKDRGVR 645
Query: 567 KSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTII 600
K G SWI ++E+H F D H + +EIY ++
Sbjct: 646 KEKGISWIHIKNEVHAFGVEDVIHPQKDEIYKLM 679
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 136/456 (29%), Positives = 241/456 (52%), Gaps = 28/456 (6%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG AK VF M ++ +WN++++ +G A E+M D +V
Sbjct: 186 MYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRD-----IV 240
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
SW+++I G++Q GY+ EA+ + +M E L+P+ TL+S+L ACA L+KL++GK+ H Y
Sbjct: 241 SWNSMISGYSQQGYNLEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAY 300
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIF--SKFSIKNEVSCNTIIVGYCENGNVA 177
I R ++ V N L+ +Y + G + A I ++ S N ++ +++ GY + GNV
Sbjct: 301 ILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVK 360
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
ARE+F+++ R +++W +MI GYV N L+++A +FR L++ +G EP S+T ++
Sbjct: 361 PAREIFNKLR----DRDVVAWTAMIVGYVQNGLWNDALELFR-LMVNEGPEPNSYTLAAM 415
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFD------E 291
L + + L GK+IHA AI G S V AL+ MY + ++ A+ FD E
Sbjct: 416 LSVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKE 475
Query: 292 IENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG 351
I + +++ + + G A+ LF MLS+ + PD T +LSAC+ + +E+G
Sbjct: 476 IVSWTSMIMALAQHGLGK-----EAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQG 530
Query: 352 KQVHAYAIRCG-YDSDVHIGTALVDMYAKCGSLKHARLAYKRIST-PDLVSQNAMLTAYA 409
++ + + + ++D+Y + G L+ A L + + PD ++ ++L +
Sbjct: 531 RKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCK 590
Query: 410 MHGHGKEGIAHFRRILA--SGFRPDHISFLSALSAC 443
+H + R+L G +++ + SAC
Sbjct: 591 IHKNADLAKVAAERLLLIDPGNSGAYLALANVYSAC 626
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 143/555 (25%), Positives = 246/555 (44%), Gaps = 109/555 (19%)
Query: 97 LSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFS 156
+ +L R++ G+ H I + G +++N L+ Y + G + A +F +
Sbjct: 13 FAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMP 72
Query: 157 IKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFS 216
+K+ S NT+I GY + GN +R L +M +SW ++I GY L+D A
Sbjct: 73 LKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDP----VSWTAIIVGYNQFGLFDNAIW 128
Query: 217 MFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMY 276
MF ++ + + P+ FT +VL +CA +L G++IH+ + LGL S V +L+ MY
Sbjct: 129 MFAKMI-SERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMY 187
Query: 277 CRYQDLVAAQMAFDE--IENIEN---LLGKMKEDG--------FEP----NVYTWNAM-- 317
+ D V A++ FD ++NI L+ + G FE ++ +WN+M
Sbjct: 188 AKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMIS 247
Query: 318 ------------QLFSEMLS-LDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYD 364
+FS+ML+ L PD +T+ ILSAC++L + GKQ+HAY +R +
Sbjct: 248 GYSQQGYNLEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETE 307
Query: 365 SDVHIGTALVDMYAKCGSLKHARL---------------------------------AYK 391
+ +G AL+ MYAK G ++ ARL +
Sbjct: 308 TSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFN 367
Query: 392 RISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSAC-------- 443
++ D+V+ AM+ Y +G + + FR ++ G P+ + + LS
Sbjct: 368 KLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEH 427
Query: 444 ---VHAGSIKTG-----SEFFDLMAYY----------------DVKPSLKHYTCMVDLLS 479
+HA +IK G S L+A Y + K + +T M+ L+
Sbjct: 428 GKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALA 487
Query: 480 RAGELGEA---YEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLI---ELEPNN 533
+ G EA +E + + M PD + + +L C G +E G+ + + E+EP
Sbjct: 488 QHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEP-T 546
Query: 534 TGNYVMLANLFAYAG 548
+Y + +L+ AG
Sbjct: 547 LSHYACMIDLYGRAG 561
>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Glycine max]
Length = 747
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 210/605 (34%), Positives = 366/605 (60%), Gaps = 18/605 (2%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETP--NL 59
Y K + A++VF MP+R+ SWN+++++ L CL M + + P ++
Sbjct: 54 YAKFDRITYARRVFDQMPQRNLYSWNTLLSS-------YSKLACLPEMERVFHAMPTRDM 106
Query: 60 VSWSAVIGGFTQNGYDEEAIGMLFRMQAEG-LEPNARTLSSVLPACARLQKLSLGKEFHG 118
VSW+++I + G+ +++ M G N LS++L ++ + LG + HG
Sbjct: 107 VSWNSLISAYAGRGFLLQSVKAYNLMLYNGPFNLNRIALSTMLILASKQGCVHLGLQVHG 166
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
++ + GF S FV + LVD+Y + G + A + F + KN V NT+I G + +
Sbjct: 167 HVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQAFDEMPEKNVVMYNTLIAGLMRCSRIED 226
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
+R+LF M+ ++ ISW +MI+G+ N L EA +FR++ + + +E +TFGSVL
Sbjct: 227 SRQLFYDMQ----EKDSISWTAMIAGFTQNGLDREAIDLFREMRL-ENLEMDQYTFGSVL 281
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
AC + +L++GK++HA I Q + FVG ALV+MYC+ + + +A+ F ++ N +N+
Sbjct: 282 TACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIKSAETVFRKM-NCKNV 340
Query: 299 LG-KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAY 357
+ G+ N Y+ A+++F +M + + PD +T+G ++S+C++LA++E G Q H
Sbjct: 341 VSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCANLASLEEGAQFHCR 400
Query: 358 AIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEG 417
A+ G S + + ALV +Y KCGS++ + + +S D VS A+++ YA G E
Sbjct: 401 ALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMSYVDEVSWTALVSGYAQFGKANET 460
Query: 418 IAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFD-LMAYYDVKPSLKHYTCMVD 476
+ F +LA GF+PD ++F+ LSAC AG ++ G++ F+ ++ + + P HYTCM+D
Sbjct: 461 LRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQIFESMIKEHRIIPIEDHYTCMID 520
Query: 477 LLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGN 536
L SRAG L EA +FI K+P +PD++ W +LL C H N+E G+ AA+ L++LEP+NT +
Sbjct: 521 LFSRAGRLEEARKFINKMPFSPDAIGWASLLSSCRFHRNMEIGKWAAESLLKLEPHNTAS 580
Query: 537 YVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEI 596
Y++L++++A G+W ++A R+ M+D+ + K PGCSWI+ ++++H F A D+S+ S++I
Sbjct: 581 YILLSSIYAAKGKWEEVANLRKGMRDKGLRKEPGCSWIKYKNQVHIFSADDQSNPFSDQI 640
Query: 597 YTIID 601
Y+ ++
Sbjct: 641 YSELE 645
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 122/448 (27%), Positives = 204/448 (45%), Gaps = 48/448 (10%)
Query: 104 CARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSC 163
C L+ K+ H +I + F++N LV Y + + A ++F + +N S
Sbjct: 19 CELLKHCRDTKKIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMPQRNLYSW 78
Query: 164 NTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLM 223
NT++ Y + + E +F M R ++SWNS+IS Y ++ + +L
Sbjct: 79 NTLLSSYSKLACLPEMERVFHAMP----TRDMVSWNSLISAYAGRGFLLQSVKAYNLMLY 134
Query: 224 RDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLV 283
++LI + + G ++H + G QS FVG LV+MY + +
Sbjct: 135 NGPFNLNRIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVF 194
Query: 284 AAQMAFDE---------------------IENIENLLGKMKED----------GFEPNVY 312
A+ AFDE IE+ L M+E GF N
Sbjct: 195 CARQAFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGL 254
Query: 313 TWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTA 372
A+ LF EM +L D YT G +L+AC + ++ GKQVHAY IR Y ++ +G+A
Sbjct: 255 DREAIDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSA 314
Query: 373 LVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPD 432
LVDMY KC S+K A +++++ ++VS AML Y +G+ +E + F + +G PD
Sbjct: 315 LVDMYCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPD 374
Query: 433 HISFLSALSACVHAGSIKTGSEFF------DLMAYYDVKPSLKHYTCMVDLLSRAGELGE 486
+ S +S+C + S++ G++F L+++ V +L V L + G + +
Sbjct: 375 DFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNAL------VTLYGKCGSIED 428
Query: 487 AYEFIKKIPMAPDSVMWGALLGGCVSHG 514
++ ++ D V W AL+ G G
Sbjct: 429 SHRLFSEMSYV-DEVSWTALVSGYAQFG 455
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 121/413 (29%), Positives = 199/413 (48%), Gaps = 43/413 (10%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G + A++ F MPE++ V +N+++ + ++ + M D+ +
Sbjct: 186 MYSKTGLVFCARQAFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDS-----I 240
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A+I GFTQNG D EAI + M+ E LE + T SVL AC + L GK+ H YI
Sbjct: 241 SWTAMIAGFTQNGLDREAIDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYI 300
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R + N FV + LVD+Y +C + SA +F K + KN VS ++VGY +NG EA
Sbjct: 301 IRTDYQDNIFVGSALVDMYCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAV 360
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
++F M++ +GIEP FT GSV+ +
Sbjct: 361 KIFCDMQN------------------------------------NGIEPDDFTLGSVISS 384
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA++ SL +G + H A+ GL S V ALV +Y + + + F E+ ++ +
Sbjct: 385 CANLASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMSYVDEVSW 444
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G+ ++LF ML+ PD T +LSACS +++G Q+ I+
Sbjct: 445 TALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQIFESMIK 504
Query: 361 CGYDSDVHIG-TALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNAMLTAYAMH 411
+ T ++D++++ G L+ AR ++ +PD + ++L++ H
Sbjct: 505 EHRIIPIEDHYTCMIDLFSRAGRLEEARKFINKMPFSPDAIGWASLLSSCRFH 557
>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 786
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 233/632 (36%), Positives = 342/632 (54%), Gaps = 44/632 (6%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y K G A+K+F MP R SWN+V++A A G + + E +R+ D+ V
Sbjct: 58 VYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYAKRGDMDSSCEFFDRLPQRDS-----V 112
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ +I G+ G +AI ++ M EG+EP+ TL++VL + A + L GK+ H +I
Sbjct: 113 SWTTMIVGYKNIGQYHKAIRIMGEMMREGIEPSQFTLTNVLASVAATRCLETGKKVHSFI 172
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G N V N L+++Y +CGD + A +F + +K+ S N +I + + G + A
Sbjct: 173 VKLGLRGNVSVSNSLLNMYAKCGDPMMAKVVFDRMVVKDISSWNAMIALHMQVGQMDLAM 232
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
F+QM +R I++WNSMISGY A MF +L + P FT SVL A
Sbjct: 233 AQFEQM----AERDIVTWNSMISGYNQRGYDLRALDMFSKMLRDSMLSPDRFTLASVLSA 288
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDE-------IE 293
CA++ L G++IH+ + G V AL+ MY R + A+ ++ IE
Sbjct: 289 CANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIE 348
Query: 294 NIENL------LGKMKE-----DGF-EPNVYTWNAM--------------QLFSEMLSLD 327
L LG M E D + +V W AM LF M+ +
Sbjct: 349 GFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHGLYGEAINLFRSMVGEE 408
Query: 328 LTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHAR 387
P+ YT+ +LS SSLA++ GKQ+H A++ G V + AL+ MYAK GS+ A
Sbjct: 409 QRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGSITSAS 468
Query: 388 LAYKRISTP-DLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHA 446
A+ I D VS +M+ A A HGH +E + F +L G RPDHI+++ SAC HA
Sbjct: 469 RAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHA 528
Query: 447 GSIKTGSEFFDLMAYYD-VKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGA 505
G + G ++FD+M D + P+L HY CMVDL RAG L EA EFI+K+P+ PD V WG+
Sbjct: 529 GLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGS 588
Query: 506 LLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRM 565
LL C + N++ G++AA+RL+ LEP N+G Y LANL++ G+W + A+ R+ MKD R+
Sbjct: 589 LLSACRVYKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRV 648
Query: 566 HKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
K G SWIE + ++H F D H + EIY
Sbjct: 649 KKEQGFSWIEVKHKVHAFGVEDGIHPQKNEIY 680
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 128/499 (25%), Positives = 232/499 (46%), Gaps = 78/499 (15%)
Query: 92 PNARTLSSVLPACARLQKLSLGKE--------FHGYITRNGFMSNPFVVNGLVDVYRRCG 143
P +LS++L C L + S+ K H + ++G + + +++N L++VY + G
Sbjct: 4 PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLVFSVYLMNNLMNVYSKTG 63
Query: 144 DMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMIS 203
L A K+F + ++ S NT++ Y + G++ + E FD++ QR +SW +MI
Sbjct: 64 YALHARKLFDEMPLRTAFSWNTVLSAYAKRGDMDSSCEFFDRLP----QRDSVSWTTMIV 119
Query: 204 GYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQ 263
GY + Y +A + + +MR+GIEP+ FT +VL + A L GK++H+ + LGL+
Sbjct: 120 GYKNIGQYHKAIRIMGE-MMREGIEPSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLR 178
Query: 264 SDTFVGGALVEMYCRYQDLVAAQMAFDE--IENIENL---------LGKMK------EDG 306
+ V +L+ MY + D + A++ FD +++I + +G+M E
Sbjct: 179 GNVSVSNSLLNMYAKCGDPMMAKVVFDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQM 238
Query: 307 FEPNVYTWNAM--------------QLFSEMLSLD-LTPDIYTVGIILSACSSLATMERG 351
E ++ TWN+M +FS+ML L+PD +T+ +LSAC++L + G
Sbjct: 239 AERDIVTWNSMISGYNQRGYDLRALDMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIG 298
Query: 352 KQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDL------------- 398
+Q+H++ + G+D + AL+ MY++CG ++ AR ++ T DL
Sbjct: 299 EQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYI 358
Query: 399 --------------------VSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLS 438
V+ AM+ Y HG E I FR ++ RP+ + +
Sbjct: 359 KLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHGLYGEAINLFRSMVGEEQRPNSYTLAA 418
Query: 439 ALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAP 498
LS S+ G + S+ ++ + ++AG + A I
Sbjct: 419 MLSVASSLASLGHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGSITSASRAFDLIRCER 478
Query: 499 DSVMWGALLGGCVSHGNLE 517
D+V W +++ HG+ E
Sbjct: 479 DTVSWTSMIIALAQHGHAE 497
>gi|449449306|ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 223/634 (35%), Positives = 354/634 (55%), Gaps = 44/634 (6%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y K GSL A VF MP + SWN++++ A G + L M D VS
Sbjct: 55 YAKTGSLRFAHHVFDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDP-----VS 109
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W+A+I G+ Q G + AI M +M +E + P+ T+S+VL +CA Q L +G++ H ++
Sbjct: 110 WTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVV 169
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
+ G S V L+++Y +CGD + A +F + ++KN + N +I Y ++G A
Sbjct: 170 KLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAAS 229
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
F++M R I+SWNSMISGY EA +F +L ++P +FT S+L AC
Sbjct: 230 QFEKMP----DRDIVSWNSMISGYSQQGYNLEALVIFSKMLNEPSLKPDNFTLASILSAC 285
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQM-------------A 288
A++ L GK+IHA + ++ VG AL+ MY + + A++ A
Sbjct: 286 ANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIA 345
Query: 289 FDEIENIENLLGKMK--EDGF----EPNVYTWNAM--------------QLFSEMLSLDL 328
F + + LG +K + F + +V W AM +LF M++
Sbjct: 346 FTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGP 405
Query: 329 TPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARL 388
P+ YT+ +LS SSL +E GKQ+HA AI+ G S + AL+ MYAK G++ A+
Sbjct: 406 EPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKR 465
Query: 389 AYKRIS-TPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAG 447
+ + ++VS +M+ A A HG GKE I F R+L+ G +PDHI+++ LSAC H G
Sbjct: 466 VFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVG 525
Query: 448 SIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGAL 506
++ G +++++M ++++P+L HY CM+DL RAG L EAY FI+ +P+ PD++ WG+L
Sbjct: 526 LVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSL 585
Query: 507 LGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMH 566
L C H N + ++AA+RL+ ++P N+G Y+ LAN+++ G+W + A+TR+ MKDR +
Sbjct: 586 LASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSACGKWENAAQTRKLMKDRGVR 645
Query: 567 KSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTII 600
K G SWI ++E+H F D H + +EIY ++
Sbjct: 646 KEKGISWIHIKNEVHAFGVEDVIHPQKDEIYKLM 679
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 136/456 (29%), Positives = 241/456 (52%), Gaps = 28/456 (6%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG AK VF M ++ +WN++++ +G A E+M D +V
Sbjct: 186 MYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRD-----IV 240
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
SW+++I G++Q GY+ EA+ + +M E L+P+ TL+S+L ACA L+KL++GK+ H Y
Sbjct: 241 SWNSMISGYSQQGYNLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAY 300
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIF--SKFSIKNEVSCNTIIVGYCENGNVA 177
I R ++ V N L+ +Y + G + A I ++ S N ++ +++ GY + GNV
Sbjct: 301 ILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVK 360
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
ARE+F+++ R +++W +MI GYV N L+++A +FR L++ +G EP S+T ++
Sbjct: 361 PAREIFNKLR----DRDVVAWTAMIVGYVQNGLWNDALELFR-LMVNEGPEPNSYTLAAM 415
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFD------E 291
L + + L GK+IHA AI G S V AL+ MY + ++ A+ FD E
Sbjct: 416 LSVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKE 475
Query: 292 IENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG 351
I + +++ + + G A+ LF MLS+ + PD T +LSAC+ + +E+G
Sbjct: 476 IVSWTSMIMALAQHGLGK-----EAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQG 530
Query: 352 KQVHAYAIRCG-YDSDVHIGTALVDMYAKCGSLKHARLAYKRIST-PDLVSQNAMLTAYA 409
++ + + + ++D+Y + G L+ A L + + PD ++ ++L +
Sbjct: 531 RKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCK 590
Query: 410 MHGHGKEGIAHFRRILA--SGFRPDHISFLSALSAC 443
+H + R+L G +++ + SAC
Sbjct: 591 IHKNADLAKVAAERLLLIDPGNSGAYLALANVYSAC 626
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 143/555 (25%), Positives = 246/555 (44%), Gaps = 109/555 (19%)
Query: 97 LSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFS 156
+ +L R++ G+ H I + G +++N L+ Y + G + A +F +
Sbjct: 13 FAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMP 72
Query: 157 IKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFS 216
+K+ S NT+I GY + GN +R L +M +SW ++I GY L+D A
Sbjct: 73 LKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDP----VSWTAIIVGYNQFGLFDNAIW 128
Query: 217 MFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMY 276
MF ++ + + P+ FT +VL +CA +L G++IH+ + LGL S V +L+ MY
Sbjct: 129 MFAKMI-SERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMY 187
Query: 277 CRYQDLVAAQMAFDE--IENIEN---LLGKMKEDG--------FEP----NVYTWNAM-- 317
+ D V A++ FD ++NI L+ + G FE ++ +WN+M
Sbjct: 188 AKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMIS 247
Query: 318 ------------QLFSEMLS-LDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYD 364
+FS+ML+ L PD +T+ ILSAC++L + GKQ+HAY +R +
Sbjct: 248 GYSQQGYNLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETE 307
Query: 365 SDVHIGTALVDMYAKCGSLKHARL---------------------------------AYK 391
+ +G AL+ MYAK G ++ ARL +
Sbjct: 308 TSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFN 367
Query: 392 RISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSAC-------- 443
++ D+V+ AM+ Y +G + + FR ++ G P+ + + LS
Sbjct: 368 KLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEH 427
Query: 444 ---VHAGSIKTG-----SEFFDLMAYY----------------DVKPSLKHYTCMVDLLS 479
+HA +IK G S L+A Y + K + +T M+ L+
Sbjct: 428 GKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALA 487
Query: 480 RAGELGEA---YEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLI---ELEPNN 533
+ G EA +E + + M PD + + +L C G +E G+ + + E+EP
Sbjct: 488 QHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEP-T 546
Query: 534 TGNYVMLANLFAYAG 548
+Y + +L+ AG
Sbjct: 547 LSHYACMIDLYGRAG 561
>gi|359480846|ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 785
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 221/634 (34%), Positives = 356/634 (56%), Gaps = 44/634 (6%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y K G + DA +VF MP + SWN +++ A G + EA E M P+ VS
Sbjct: 58 YAKTGFIYDAHRVFDEMPVKSVFSWNIILSGYAKGGRLEEAHRVFEEMPE-----PDSVS 112
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W+A+I G+ Q G E AIGM M ++ + P TL++VL +CA ++ L +G++ H ++
Sbjct: 113 WTAMIVGYNQMGQFENAIGMFREMVSDDVPPTQFTLTNVLASCAAVECLGIGRKVHSFVV 172
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
++G S V N L+++Y + GD ++A +F + +K+ S NT+I + ++G V A+
Sbjct: 173 KHGLSSYISVANSLLNMYAKSGDPVTAKIVFDRMKLKSTSSWNTMISSHMQSGLVDLAQV 232
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
F+QM ++R ++SWN+MISGY + EA +F +LM +P FT S L AC
Sbjct: 233 QFEQM----IERDVVSWNAMISGYNQHGFDREALDIFSKMLMDSSSKPDKFTLASALSAC 288
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDE--IENIENL- 298
A++ +L+ GK+IHA I + VG AL+ MY + + AQ ++ I N++ +
Sbjct: 289 ANLENLKLGKQIHAHIIRTEFDTFGAVGNALISMYSKSGGVEIAQKIIEQSMISNLDVIA 348
Query: 299 ----------LGKMKED--------------------GFEPNVYTWNAMQLFSEMLSLDL 328
LG + G+ N + +AM+LF M+
Sbjct: 349 FTALLDGYVKLGDINPARRIFDSLRVRDVVAWTAMIVGYVQNGFNQDAMELFRSMIKEGP 408
Query: 329 TPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARL 388
P+ YT+ +LS SSLA+++ G+Q+HA A R G S V + AL+ MYAK GS+ AR
Sbjct: 409 KPNNYTLATMLSVSSSLASLDHGRQIHASATRSGNASSVSVSNALITMYAKSGSINDARW 468
Query: 389 AYKRIS-TPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAG 447
+ I D ++ +M+ A A HG G+E + F R+L +G +PDHI+++ LSAC H G
Sbjct: 469 VFNLIHWKRDTITWTSMIIALAQHGLGEEALTLFERMLENGIKPDHITYVGVLSACTHVG 528
Query: 448 SIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGAL 506
++ G +++LM + + P+ HY CM+DL RAG L EA+ FI+ +P+ PD + WG+L
Sbjct: 529 LVEQGRSYYNLMQNAHKIIPTPSHYACMIDLFGRAGLLQEAHAFIENMPIEPDVIAWGSL 588
Query: 507 LGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMH 566
L C H N+E ++AA+RL+ +EP N+G Y LAN+++ G+W + A R+ MKD+ +
Sbjct: 589 LASCKVHKNVELAEVAAERLLLIEPENSGAYSALANVYSACGQWENAANIRKSMKDKGVK 648
Query: 567 KSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTII 600
K G SW++ ++++H F D H + + IY ++
Sbjct: 649 KDQGFSWVQIKNKVHIFGVDDGLHPQRDAIYEMM 682
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 125/504 (24%), Positives = 229/504 (45%), Gaps = 74/504 (14%)
Query: 98 SSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSI 157
+S L + + GK H I + G F++N L++ Y + G + A ++F + +
Sbjct: 17 TSFLQRSLKFKDPFTGKSIHARIIKAGLHLGVFLMNNLMNFYAKTGFIYDAHRVFDEMPV 76
Query: 158 KNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSM 217
K+ S N I+ GY + G + EA +F++M + +SW +MI GY ++ A M
Sbjct: 77 KSVFSWNIILSGYAKGGRLEEAHRVFEEMP----EPDSVSWTAMIVGYNQMGQFENAIGM 132
Query: 218 FRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYC 277
FR+++ D + PT FT +VL +CA + L G+++H+ + GL S V +L+ MY
Sbjct: 133 FREMV-SDDVPPTQFTLTNVLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYA 191
Query: 278 RYQDLVAAQMAFDEIE-----------------NIENLLGKMKEDGFEPNVYTWNAM--- 317
+ D V A++ FD ++ + +L E E +V +WNAM
Sbjct: 192 KSGDPVTAKIVFDRMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISG 251
Query: 318 -----------QLFSEMLSLDLT--PDIYTVGIILSACSSLATMERGKQVHAYAIRCGYD 364
+FS+ML +D + PD +T+ LSAC++L ++ GKQ+HA+ IR +D
Sbjct: 252 YNQHGFDREALDIFSKML-MDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFD 310
Query: 365 S---------------------------------DVHIGTALVDMYAKCGSLKHARLAYK 391
+ DV TAL+D Y K G + AR +
Sbjct: 311 TFGAVGNALISMYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFD 370
Query: 392 RISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKT 451
+ D+V+ AM+ Y +G ++ + FR ++ G +P++ + + LS S+
Sbjct: 371 SLRVRDVVAWTAMIVGYVQNGFNQDAMELFRSMIKEGPKPNNYTLATMLSVSSSLASLDH 430
Query: 452 GSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCV 511
G + S+ ++ + +++G + +A I D++ W +++
Sbjct: 431 GRQIHASATRSGNASSVSVSNALITMYAKSGSINDARWVFNLIHWKRDTITWTSMIIALA 490
Query: 512 SHGNLEFGQIAADRLIE--LEPNN 533
HG E +R++E ++P++
Sbjct: 491 QHGLGEEALTLFERMLENGIKPDH 514
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 132/462 (28%), Positives = 231/462 (50%), Gaps = 40/462 (8%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G AK VF M + SWN+++++ +GLV A E+M D +V
Sbjct: 189 MYAKSGDPVTAKIVFDRMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERD-----VV 243
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
SW+A+I G+ Q+G+D EA+ + +M + +P+ TL+S L ACA L+ L LGK+ H +
Sbjct: 244 SWNAMISGYNQHGFDREALDIFSKMLMDSSSKPDKFTLASALSACANLENLKLGKQIHAH 303
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKN--EVSCNTIIVGYCENGNVA 177
I R F + V N L+ +Y + G + A KI + I N ++ ++ GY + G++
Sbjct: 304 IIRTEFDTFGAVGNALISMYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDIN 363
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
AR +FD + R +++W +MI GYV N +A +FR ++ ++G +P ++T ++
Sbjct: 364 PARRIFDSLR----VRDVVAWTAMIVGYVQNGFNQDAMELFRSMI-KEGPKPNNYTLATM 418
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE---- 293
L + + SL G++IHA A G S V AL+ MY + + A+ F+ I
Sbjct: 419 LSVSSSLASLDHGRQIHASATRSGNASSVSVSNALITMYAKSGSINDARWVFNLIHWKRD 478
Query: 294 --NIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG 351
+++ + + G A+ LF ML + PD T +LSAC+ + +E+G
Sbjct: 479 TITWTSMIIALAQHGLGE-----EALTLFERMLENGIKPDHITYVGVLSACTHVGLVEQG 533
Query: 352 KQVH-----AYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST-PDLVSQNAML 405
+ + A+ I + H ++D++ + G L+ A + + PD+++ ++L
Sbjct: 534 RSYYNLMQNAHKI---IPTPSHYA-CMIDLFGRAGLLQEAHAFIENMPIEPDVIAWGSLL 589
Query: 406 TAYAMHGHGKEGIAHFRRILASGFRPDHISFLSAL----SAC 443
+ +H + + R+L P++ SAL SAC
Sbjct: 590 ASCKVHKNVELAEVAAERLLL--IEPENSGAYSALANVYSAC 629
>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
Length = 745
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 223/601 (37%), Positives = 357/601 (59%), Gaps = 17/601 (2%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
YGK G A++VF MP + ++N++++ A L+ + M+ D +VS
Sbjct: 51 YGKAGRHARARRVFDAMPHPNLFTYNALLSTLAHARLLSDMEALFASMTQRD-----IVS 105
Query: 62 WSAVIGGFTQNGYDEEAIGM-LFRMQAEG-LEPNARTLSSVLPACARLQKLSLGKEFHGY 119
++AVI GF+ G +A+ + L +QA+ + P+ T+S+++ A + L +LGK+FH
Sbjct: 106 YNAVIAGFSGGGSHAQAVRVYLALLQADSSVRPSRITMSTMVMAASALGDRALGKQFHCQ 165
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
I R GF +N FV + LVD+Y + + A + F + KN V NT+I G V EA
Sbjct: 166 ILRLGFGANAFVGSPLVDMYAKMSLVGDAKRAFDEVDSKNVVMYNTMITGLLRCKMVEEA 225
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
R LF+ M R I+W +M++G+ N L EA +FR + + GI +TFGS+L
Sbjct: 226 RRLFEVM----TDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQ-GIAIDQYTFGSILT 280
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI--ENIEN 297
AC +++L +GK+IHA I + FVG ALV+MY + + + A+ F + +NI +
Sbjct: 281 ACGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCKNIIS 340
Query: 298 LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAY 357
+ G+ N + A+++FSEM + PD YT+G ++S+C++LA++E G Q H
Sbjct: 341 WTALIV--GYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEEGAQFHCL 398
Query: 358 AIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEG 417
A+ G + + ALV +Y KCGS++ A + +S D VS A+++ YA G KE
Sbjct: 399 ALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSGYAQFGRAKET 458
Query: 418 IAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVD 476
I F ++LA G +PD ++F+ LSAC AG ++ G +F M + + P HYTCM+D
Sbjct: 459 IDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIVPIDDHYTCMID 518
Query: 477 LLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGN 536
L SR+G+L EA EFIK++PM PD++ WG LL C G++E G+ AA+ L+E++P N +
Sbjct: 519 LYSRSGKLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDMEIGKWAAENLLEIDPQNPAS 578
Query: 537 YVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEI 596
YV+L ++ A G+W+++A+ R+ M+DR++ K PGCSWI+ ++++H F A D+SH S+ I
Sbjct: 579 YVLLCSMHAAKGQWNEVAQLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPCSKGI 638
Query: 597 Y 597
Y
Sbjct: 639 Y 639
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 122/414 (29%), Positives = 198/414 (47%), Gaps = 43/414 (10%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K + DAK+ F + ++ V +N+++T +V EA E M+ D+ +
Sbjct: 184 MYAKMSLVGDAKRAFDEVDSKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDS-----I 238
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+ ++ GFTQNG + EA+ + RM+ +G+ + T S+L AC L L GK+ H YI
Sbjct: 239 TWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYI 298
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R + N FV + LVD+Y +C + A +F + + KN +S +IVGY +NG EA
Sbjct: 299 IRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCKNIISWTALIVGYGQNGCSEEAV 358
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+F +M+ RDGI+P +T GSV+ +
Sbjct: 359 RVFSEMQ------------------------------------RDGIDPDDYTLGSVISS 382
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA++ SL +G + H LA+ GL V ALV +Y + + A FDE+ + +
Sbjct: 383 CANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSW 442
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ-VHAYAI 359
G+ + LF +ML+ + PD T +LSACS +E+G+ H+
Sbjct: 443 TALVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQK 502
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST-PDLVSQNAMLTAYAMHG 412
G T ++D+Y++ G LK A K++ PD + +L+A + G
Sbjct: 503 DHGIVPIDDHYTCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLLSACRLRG 556
>gi|449435276|ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 743
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 214/602 (35%), Positives = 353/602 (58%), Gaps = 12/602 (1%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
YGK G L +A+ VF +P+ + SWN++++A + G + + + M + D +VS
Sbjct: 50 YGKLGDLKNARNVFDHIPQPNLFSWNTLLSAYSKLGYLQDMQRVFDSMPNHD-----VVS 104
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEG-LEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
W++++ G+ NG E++ + M +G + N T S++L + + LG++ HG I
Sbjct: 105 WNSLLSGYAGNGLISESVRVYNMMLKDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQI 164
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G+ S FV + LVD+Y + G + A +IF + KN V NT+I G + EA
Sbjct: 165 FKFGYQSYLFVGSPLVDMYAKTGFINDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAE 224
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+LFD M ++ ISW ++I+G N L+ EA F+++ + +G FTFGSVL A
Sbjct: 225 QLFDNMP----EKDSISWTTIITGLTQNGLFKEAVDKFKEMGI-EGFCMDQFTFGSVLTA 279
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C +L +GK+IHA I Q + FVG AL++MYC+ +++ A+ F ++ + +
Sbjct: 280 CGGFLALDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKCRNVKYAEAVFRKMRHKNVISW 339
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G+ N Y+ A+++F +M ++ PD +T+G ++S+C++LA++E G Q H A+
Sbjct: 340 TAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISSCANLASLEEGAQFHGQALA 399
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
G V + AL+ +Y KCGSL+HA + + D VS A+++ YA G E I+
Sbjct: 400 SGLICFVTVSNALITLYGKCGSLEHAHQLFHEMKIRDEVSWTALVSGYAQFGKANETISL 459
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLS 479
F +LA G PD ++F+ LSAC AG ++ G +F+ M + + P HYTCM+DLLS
Sbjct: 460 FETMLAHGIVPDGVTFVGVLSACSRAGLVEKGYHYFECMVKEHRITPIPDHYTCMIDLLS 519
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
RAG L EA FI ++P +PD++ W LL C +GNLE G+ AA+ L +LEP N +Y++
Sbjct: 520 RAGRLEEAKNFINQMPFSPDAIGWATLLSSCRLNGNLEIGKWAAESLHKLEPQNPASYIL 579
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTI 599
L++++A G+W D+A+ R+ M++ + K PG SWI+ ++++H F A DRS S++IY
Sbjct: 580 LSSIYAAKGKWDDVAKLRKGMREMGVKKEPGHSWIKYKNKVHIFSADDRSSPFSDQIYAK 639
Query: 600 ID 601
++
Sbjct: 640 LE 641
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 125/457 (27%), Positives = 219/457 (47%), Gaps = 54/457 (11%)
Query: 98 SSVLPACARLQKLSLGKEFHGYITRNGFMSNP--FVVNGLVDVYRRCGDMLSALKIFSKF 155
++ L C + + K+ H I R ++NP F+ N L++ Y + GD+ +A +F
Sbjct: 9 TAALKFCCEARNRAQVKKLHCRIIRT--LTNPETFLYNNLINTYGKLGDLKNARNVFDHI 66
Query: 156 SIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAF 215
N S NT++ Y + G + + + +FD M + ++SWNS++SGY N L E+
Sbjct: 67 PQPNLFSWNTLLSAYSKLGYLQDMQRVFDSMPN----HDVVSWNSLLSGYAGNGLISESV 122
Query: 216 SMFRDLLMRDG-IEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVE 274
++ +++++DG + TF ++LI ++ + G++IH G QS FVG LV+
Sbjct: 123 RVY-NMMLKDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVD 181
Query: 275 MYCRYQDLVAAQMAFDEI--ENI-------------------ENLLGKMKED-------- 305
MY + + A F+EI +NI E L M E
Sbjct: 182 MYAKTGFINDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTI 241
Query: 306 --GFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGY 363
G N A+ F EM D +T G +L+AC ++ GKQ+HAY IR Y
Sbjct: 242 ITGLTQNGLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDY 301
Query: 364 DSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRR 423
++ +G+AL+DMY KC ++K+A ++++ +++S AML Y +G+ +E + F
Sbjct: 302 QDNIFVGSALLDMYCKCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCD 361
Query: 424 ILASGFRPDHISFLSALSACVHAGSIKTGSEFF------DLMAYYDVKPSLKHYTCMVDL 477
+ + PD + S +S+C + S++ G++F L+ + V +L + L
Sbjct: 362 MQRNEIHPDDFTLGSVISSCANLASLEEGAQFHGQALASGLICFVTVSNAL------ITL 415
Query: 478 LSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
+ G L A++ ++ + D V W AL+ G G
Sbjct: 416 YGKCGSLEHAHQLFHEMKIR-DEVSWTALVSGYAQFG 451
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 115/416 (27%), Positives = 196/416 (47%), Gaps = 45/416 (10%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G ++DA ++F+ +PE++ V +N+++T ++EA + + M D+ +
Sbjct: 182 MYAKTGFINDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDS-----I 236
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ +I G TQNG +EA+ M EG + T SVL AC L GK+ H YI
Sbjct: 237 SWTTIITGLTQNGLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYI 296
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R + N FV + L+D+Y +C ++ A +F K KN +S ++VGY +NG EA
Sbjct: 297 IRTDYQDNIFVGSALLDMYCKCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAV 356
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+F M+ R+ I P FT GSV+ +
Sbjct: 357 RIFCDMQ------------------------------------RNEIHPDDFTLGSVISS 380
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA++ SL +G + H A+A GL V AL+ +Y + L A F E++ + +
Sbjct: 381 CANLASLEEGAQFHGQALASGLICFVTVSNALITLYGKCGSLEHAHQLFHEMKIRDEVSW 440
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G+ + LF ML+ + PD T +LSACS +E+G ++
Sbjct: 441 TALVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSACSRAGLVEKGYHYFECMVK 500
Query: 361 CGYDSDV--HIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNAMLTAYAMHGH 413
+ + H T ++D+ ++ G L+ A+ ++ +PD + +L++ ++G+
Sbjct: 501 EHRITPIPDHY-TCMIDLLSRAGRLEEAKNFINQMPFSPDAIGWATLLSSCRLNGN 555
>gi|225425182|ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
[Vitis vinifera]
Length = 684
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 211/639 (33%), Positives = 350/639 (54%), Gaps = 81/639 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+YGKC LDDA+K+F MP+R+ +WNS+++ +G + EA M P+
Sbjct: 59 VYGKCDCLDDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPE-----PDQC 113
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW++++ GF Q+ EE++ +M E N + S L ACA L L++G + H +
Sbjct: 114 SWNSMVSGFAQHDRFEESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALV 173
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+++ + ++ ++ + L+D+Y +CG + A ++FS +N V+ N++I Y +NG +EA
Sbjct: 174 SKSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEAL 233
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
E+F +M M G+EP T SV+ A
Sbjct: 234 EVFVRM------------------------------------MDSGLEPDEVTLASVVSA 257
Query: 241 CADMNSLRKGKEIHALAIALG-LQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
CA + +L++G +IHA + + D +G ALV+MY + + A+ FD + +I N++
Sbjct: 258 CASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRM-SIRNVV 316
Query: 300 GK------------------MKEDGFEPNVYTWN--------------AMQLFSEMLSLD 327
+ M + NV +WN A++LF +
Sbjct: 317 SETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRES 376
Query: 328 LTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGY------DSDVHIGTALVDMYAKCG 381
+ P YT G +LSAC++LA + G+Q H + ++ G+ +SD+ +G +L+DMY KCG
Sbjct: 377 IWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGNSLIDMYMKCG 436
Query: 382 SLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALS 441
S++ ++++ D VS NA++ YA +G+G E + FR++L G +PDH++ + L
Sbjct: 437 SIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLC 496
Query: 442 ACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSV 501
AC HAG ++ G +F M + + P HYTCMVDLL RAG L EA I+ +P+ PD+V
Sbjct: 497 ACSHAGLVEEGRHYFFSMEEHGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAV 556
Query: 502 MWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMK 561
+WG+LL C HGN+E G+ AA++L+E++P N+G YV+L+N++A GRW D+ R R+ M+
Sbjct: 557 VWGSLLAACKVHGNIEMGKHAAEKLLEIDPWNSGPYVLLSNMYAELGRWGDVVRVRKLMR 616
Query: 562 DRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTII 600
+ + K PGCSWIE +H F D+SH ++IY+++
Sbjct: 617 QQGVTKQPGCSWIEVESRVHVFLVKDKSHPHRKQIYSVL 655
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 123/480 (25%), Positives = 211/480 (43%), Gaps = 82/480 (17%)
Query: 92 PNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKI 151
PN+ + +L +C R + + H I F F+ N L+DVY +C + A K+
Sbjct: 13 PNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKL 72
Query: 152 FSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLY 211
F + +N + N++I ++G + EA LF M + SWNSM+SG+ + +
Sbjct: 73 FDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMP----EPDQCSWNSMVSGFAQHDRF 128
Query: 212 DEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGA 271
+E+ F + R+ ++FGS L ACA + L G ++HAL +D ++G A
Sbjct: 129 EESLEYFVK-MHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSA 187
Query: 272 LVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWN--------------AM 317
L++MY + + A+ F + E N+ TWN A+
Sbjct: 188 LIDMYSKCGSVACAEEVFSGM--------------IERNLVTWNSLITCYEQNGPASEAL 233
Query: 318 QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCG-YDSDVHIGTALVDM 376
++F M+ L PD T+ ++SAC+SL ++ G Q+HA ++ + D+ +G ALVDM
Sbjct: 234 EVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDM 293
Query: 377 YAKC-------------------------------GSLKHARLAYKRISTPDLVSQNAML 405
YAKC S+K AR + +++ ++VS NA++
Sbjct: 294 YAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALI 353
Query: 406 TAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSAC-----------VHAGSIKTGSE 454
Y +G +E + FR + P H +F + LSAC H +K G E
Sbjct: 354 AGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFE 413
Query: 455 FFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
F + + ++D+ + G + + +K+ D V W A++ G +G
Sbjct: 414 F-----QSGAESDIFVGNSLIDMYMKCGSIEDGSRVFEKMK-ERDCVSWNAIIVGYAQNG 467
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 107/406 (26%), Positives = 178/406 (43%), Gaps = 68/406 (16%)
Query: 217 MFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMY 276
M + L+RD P S F +L +C S R + +HA + + F+ L+++Y
Sbjct: 1 MAKHGLVRDLYLPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVY 60
Query: 277 CRYQDLVAAQMAFDEIEN-----IENLLGKMKEDGF------------EPNVYTWNAM-- 317
+ L A+ FD + +L+ + + GF EP+ +WN+M
Sbjct: 61 GKCDCLDDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVS 120
Query: 318 ------------QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDS 365
+ F +M D + Y+ G LSAC+ L + G QVHA + Y +
Sbjct: 121 GFAQHDRFEESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYST 180
Query: 366 DVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRIL 425
DV++G+AL+DMY+KCGS+ A + + +LV+ N+++T Y +G E + F R++
Sbjct: 181 DVYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMM 240
Query: 426 ASGFRPDHISFLSALSAC-----------VHAGSIKT---------GSEFFDLMA----- 460
SG PD ++ S +SAC +HA +KT G+ D+ A
Sbjct: 241 DSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKV 300
Query: 461 -----YYDVKPSLKHY---TCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVS 512
+D + S+++ T MV +RA + A K+ + V W AL+ G
Sbjct: 301 NEARRVFD-RMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQR-NVVSWNALIAGYTQ 358
Query: 513 HGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQ 558
+G E + RL++ E +Y NL + +DL RQ
Sbjct: 359 NGENEEA-LRLFRLLKRESIWPTHYT-FGNLLSACANLADLLLGRQ 402
>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
Length = 886
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 226/635 (35%), Positives = 340/635 (53%), Gaps = 77/635 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPER---DCVSWNSVVTACAANGLVLEALECLERMSSLDNETP 57
MY +CGSL+DA VF + + D +SWNS+V A ALE MS
Sbjct: 193 MYSRCGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMS------- 245
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
M+ +A + ++ ++LPACA L+ L KE H
Sbjct: 246 -----------------------MIVHEKATNERSDIISIVNILPACASLKALPQIKEIH 282
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
Y RNG ++ FV N L+D Y +CG M A+K+F+ K+ VS N ++ GY ++GN
Sbjct: 283 SYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKDVVSWNAMVTGYTQSGNFG 342
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
A ELF+ M + +I+W+++I+GY EA F+ +++ DG EP S T S+
Sbjct: 343 AAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQQMIL-DGSEPNSVTIISL 401
Query: 238 LIACADMNSLRKGKEIHALAIALGLQS------------DTFVGGALVEMYCRYQDLVAA 285
L ACA + +L +G EIHA ++ L S D V AL++MY + + AA
Sbjct: 402 LSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDMYSKCRSFKAA 461
Query: 286 QMAFDEIENIENLLGKMKEDGFEPNVYTW--------------NAMQLFSEMLS--LDLT 329
+ FD I E NV TW +A+++FSEM+S +
Sbjct: 462 RSIFDSIPRRER------------NVVTWTVMIGGYAQYGDSNDALKIFSEMISKPYAVA 509
Query: 330 PDIYTVGIILSACSSLATMERGKQVHAYAIRCG-YDSDVH-IGTALVDMYAKCGSLKHAR 387
P+ YT+ IL AC+ LA + GKQ+HAY R Y+ V+ + L+DMY+KCG + AR
Sbjct: 510 PNAYTISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKCGDVDTAR 569
Query: 388 LAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAG 447
+ + + VS +M++ Y MHG GKE + F ++ +GF PD ISFL L AC H+G
Sbjct: 570 NVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSG 629
Query: 448 SIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGAL 506
+ G +FD+M YDV S +HY C++DLL+R G L +A++ I+++PM P +V+W AL
Sbjct: 630 MVDQGLNYFDIMRRDYDVVASAEHYACVIDLLARCGRLDKAWKTIQEMPMEPSAVIWVAL 689
Query: 507 LGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMH 566
L C H N+E + A ++L+ ++ N G+Y +++N++A A RW D+AR RQ MK +
Sbjct: 690 LSACRVHSNVELAEYALNKLVNMKAENDGSYTLISNIYANARRWKDVARIRQLMKKSGIK 749
Query: 567 KSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
K PGCSW++ + F DRSH S EIY++++
Sbjct: 750 KRPGCSWVQGKKGTASFFVGDRSHPLSPEIYSLLE 784
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 143/554 (25%), Positives = 253/554 (45%), Gaps = 90/554 (16%)
Query: 18 MPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPN-LVSWSAVIGGFTQNGYDE 76
+P VS S+ T A+ L A + + +S L+ TP+ V W+ ++ + G+ +
Sbjct: 74 LPSHSYVSPKSLGTGVVASYLACGATK--DALSVLERVTPSPAVWWNLLVREHIKEGHLD 131
Query: 77 EAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLV 136
AIG+ RM G +P+ TL L AC L G+ HG I NGF SN FV N LV
Sbjct: 132 RAIGVSCRMLRAGTKPDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALV 191
Query: 137 DVYRRCGDMLSALKIFSKFS---IKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQR 193
+Y RCG + A +F + + I + +S N+I+ + + N A ELF +M
Sbjct: 192 AMYSRCGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEM------- 244
Query: 194 GIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEI 253
SMI ++++A + D++ + ++L ACA + +L + KEI
Sbjct: 245 ------SMI-------VHEKATNERSDII----------SIVNILPACASLKALPQIKEI 281
Query: 254 HALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE----------------- 296
H+ AI G +D FV AL++ Y + + A F+ +E +
Sbjct: 282 HSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKDVVSWNAMVTGYTQSGNF 341
Query: 297 ----NLLGKMKEDGFEPNVYTWN--------------AMQLFSEMLSLDLTPDIYTVGII 338
L M+++ +V TW+ A+ F +M+ P+ T+ +
Sbjct: 342 GAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQQMILDGSEPNSVTIISL 401
Query: 339 LSACSSLATMERGKQVHAYAIR------------CGYDSDVHIGTALVDMYAKCGSLKHA 386
LSAC+SL + +G ++HAY+++ G D+ + AL+DMY+KC S K A
Sbjct: 402 LSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDMYSKCRSFKAA 461
Query: 387 RLAYKRISTPD--LVSQNAMLTAYAMHGHGKEGIAHFRRILASGF--RPDHISFLSALSA 442
R + I + +V+ M+ YA +G + + F +++ + P+ + L A
Sbjct: 462 RSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMISKPYAVAPNAYTISCILMA 521
Query: 443 CVHAGSIKTGSEFFDLMA-YYDVKPSLKHY-TCMVDLLSRAGELGEAYEFIKKIPMAPDS 500
C H +++ G + + +++ +PS+ C++D+ S+ G++ A +P +
Sbjct: 522 CAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKCGDVDTARNVFDSMPKR-NE 580
Query: 501 VMWGALLGGCVSHG 514
V W +++ G HG
Sbjct: 581 VSWTSMMSGYGMHG 594
>gi|357464699|ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491679|gb|AES72882.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 705
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 226/640 (35%), Positives = 349/640 (54%), Gaps = 82/640 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+YGKCG L+DA+KVF M +R+ SWN+V+ A G + EAL + M D
Sbjct: 63 VYGKCGFLEDARKVFDHMQQRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQ-----C 117
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A++ GF Q EEA+ + M +E N + S L ACA L LS+G + HG I
Sbjct: 118 SWNAMVSGFAQRDRFEEALRFVVDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLI 177
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
++ + + ++ + LVD+Y +C VA A+
Sbjct: 178 AKSRYSLDVYMGSALVDMYSKCR-------------------------------VVASAQ 206
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
FD M+ R I+SWNS+I+ Y N +A +F + M GIEP T SV A
Sbjct: 207 RAFDDMD----VRNIVSWNSLITCYEQNGPAGKALEVFVRM-MNCGIEPDEITLASVASA 261
Query: 241 CADMNSLRKGKEIHALAIALG-LQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
CA ++++R+G +IHA + ++D +G ALV+MY + + + A++ FD + + +++
Sbjct: 262 CASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMP-LRDVV 320
Query: 300 GK------------------MKEDGFEPNVYTWNAM--------------QLFSEMLSLD 327
+ M + E NV +WNA+ +LF +
Sbjct: 321 SETSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFLLLKRES 380
Query: 328 LTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGY------DSDVHIGTALVDMYAKCG 381
+ P YT G +L+AC++LA ++ G+Q H + ++ G+ DSD+ +G +L+DMY KCG
Sbjct: 381 IWPTHYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCG 440
Query: 382 SLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALS 441
++ RL ++R+ D VS NAM+ YA +G+G E + FR +L SG RPDH++ + LS
Sbjct: 441 LVEDGRLVFERMLERDNVSWNAMIVGYAQNGYGTEALEIFREMLVSGERPDHVTMIGVLS 500
Query: 442 ACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDS 500
AC HAG ++ G +F M + + P HYTCMVDLL RAG L EA I+ +PM PD+
Sbjct: 501 ACSHAGLVEEGRCYFQSMTIEHGLVPVKDHYTCMVDLLGRAGCLDEANNLIQTMPMEPDA 560
Query: 501 VMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKM 560
V+WG+LL C HGN+ G+ A+RL+E++P N+G YV+L+N++A GRW D+ R R++M
Sbjct: 561 VVWGSLLAACKVHGNITLGKYVAERLLEIDPLNSGPYVLLSNMYAELGRWKDVVRVRKQM 620
Query: 561 KDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTII 600
+ + K PGCSWI + +H F D+ H ++IY I+
Sbjct: 621 RQMGVIKQPGCSWISIQSHLHVFMVKDKRHPHKKDIYLIL 660
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 113/395 (28%), Positives = 191/395 (48%), Gaps = 39/395 (9%)
Query: 93 NARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIF 152
++ + +L C + + + + H I + F S F+ N LVDVY +CG + A K+F
Sbjct: 18 DSSPFAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKVF 77
Query: 153 SKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYD 212
+N S N ++ + G + EA LF M +R SWN+M+SG+ ++
Sbjct: 78 DHMQQRNTFSWNAVLGALTKFGALDEALNLFKCMP----ERDQCSWNAMVSGFAQRDRFE 133
Query: 213 EAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGAL 272
EA D+ D + ++FGS L ACA + L G +IH L D ++G AL
Sbjct: 134 EALRFVVDMHSEDFV-LNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSAL 192
Query: 273 VEMYCRYQDLVAAQMAFDEIENIENLLG-KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPD 331
V+MY + + + +AQ AFD+++ + N++ +E N A+++F M++ + PD
Sbjct: 193 VDMYSKCRVVASAQRAFDDMD-VRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPD 251
Query: 332 IYTVGIILSACSSLATMERGKQVHAYAIRC-GYDSDVHIGTALVDMYAKCGSLKHARLAY 390
T+ + SAC+SL+ + G Q+HA ++ Y +D+ +G ALVDMYAKC + ARL +
Sbjct: 252 EITLASVASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVF 311
Query: 391 KRISTPDLVSQ-------------------------------NAMLTAYAMHGHGKEGIA 419
R+ D+VS+ NA++ Y +G +E +
Sbjct: 312 DRMPLRDVVSETSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVR 371
Query: 420 HFRRILASGFRPDHISFLSALSACVHAGSIKTGSE 454
F + P H +F + L+AC + +K G +
Sbjct: 372 LFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQ 406
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 136/298 (45%), Gaps = 32/298 (10%)
Query: 231 SFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFD 290
S F +L C S+ + + +HA I S+ F+ LV++Y + L A+ FD
Sbjct: 19 SSPFAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKVFD 78
Query: 291 EIENIEN-----LLGKMKEDGF------------EPNVYTWNAM--------------QL 319
++ +LG + + G E + +WNAM +
Sbjct: 79 HMQQRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEALRF 138
Query: 320 FSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAK 379
+M S D + Y+ G LSAC+ L + G Q+H + Y DV++G+ALVDMY+K
Sbjct: 139 VVDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYSK 198
Query: 380 CGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSA 439
C + A+ A+ + ++VS N+++T Y +G + + F R++ G PD I+ S
Sbjct: 199 CRVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLASV 258
Query: 440 LSACVHAGSIKTGSEFF-DLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPM 496
SAC +I+ G + +M + + L +VD+ ++ + EA ++P+
Sbjct: 259 ASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPL 316
>gi|356544545|ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Glycine max]
Length = 705
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 213/639 (33%), Positives = 353/639 (55%), Gaps = 82/639 (12%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
YGKCG +DA+KVF MP+R+ S+N+V++ G + EA + M P+ S
Sbjct: 64 YGKCGYFEDARKVFDRMPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPE-----PDQCS 118
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W+A++ GF Q+ EEA+ M +E N + S L ACA L L++G + H I+
Sbjct: 119 WNAMVSGFAQHDRFEEALRFFVDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALIS 178
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
++ ++ + ++ + LVD+Y +CG + A + F +++N
Sbjct: 179 KSRYLLDVYMGSALVDMYSKCGVVACAQRAFDGMAVRN---------------------- 216
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
I+SWNS+I+ Y N +A +F ++M +G+EP T SV+ AC
Sbjct: 217 -------------IVSWNSLITCYEQNGPAGKALEVFV-MMMDNGVEPDEITLASVVSAC 262
Query: 242 ADMNSLRKGKEIHALAIAL-GLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
A +++R+G +IHA + ++D +G ALV+MY + + + A++ FD + + N++
Sbjct: 263 ASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMP-LRNVVS 321
Query: 301 K------------------MKEDGFEPNVYTWNAM--------------QLFSEMLSLDL 328
+ M + E NV +WNA+ +LF + +
Sbjct: 322 ETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAVRLFLLLKRESI 381
Query: 329 TPDIYTVGIILSACSSLATMERGKQVHAYAIRCGY------DSDVHIGTALVDMYAKCGS 382
P YT G +L+AC++LA ++ G+Q H ++ G+ +SD+ +G +L+DMY KCG
Sbjct: 382 WPTHYTFGNLLNACANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMYMKCGM 441
Query: 383 LKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSA 442
++ L ++R+ D+VS NAM+ YA +G+G + FR++L SG +PDH++ + LSA
Sbjct: 442 VEDGCLVFERMVERDVVSWNAMIVGYAQNGYGTNALEIFRKMLVSGQKPDHVTMIGVLSA 501
Query: 443 CVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSV 501
C HAG ++ G +F M + P H+TCMVDLL RAG L EA + I+ +PM PD+V
Sbjct: 502 CSHAGLVEEGRRYFHSMRTELGLAPMKDHFTCMVDLLGRAGCLDEANDLIQTMPMQPDNV 561
Query: 502 MWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMK 561
+WG+LL C HGN+E G+ A++L+E++P N+G YV+L+N++A GRW D+ R R++M+
Sbjct: 562 VWGSLLAACKVHGNIELGKYVAEKLMEIDPLNSGPYVLLSNMYAELGRWKDVVRVRKQMR 621
Query: 562 DRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTII 600
R + K PGCSWIE + +H F D+ H ++I+ ++
Sbjct: 622 QRGVIKQPGCSWIEIQSRVHVFMVKDKRHPLKKDIHLVL 660
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 126/426 (29%), Positives = 205/426 (48%), Gaps = 50/426 (11%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG + A++ F M R+ VSWNS++T NG +ALE M +DN
Sbjct: 195 MYSKCGVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMM--MDN------ 246
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
G+EP+ TL+SV+ ACA + G + H +
Sbjct: 247 ----------------------------GVEPDEITLASVVSACASWSAIREGLQIHARV 278
Query: 121 TRNGFMSNPFVV-NGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ N V+ N LVD+Y +C + A +F + ++N VS +++ GY +V A
Sbjct: 279 VKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRNVVSETSMVCGYARAASVKAA 338
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
R +F M +++ ++SWN++I+GY N +EA +F LL R+ I PT +TFG++L
Sbjct: 339 RLMFSNM----MEKNVVSWNALIAGYTQNGENEEAVRLFL-LLKRESIWPTHYTFGNLLN 393
Query: 240 ACADMNSLRKGKEIHALAIALGL------QSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
ACA++ L+ G++ H + G +SD FVG +L++MY + + + F+ +
Sbjct: 394 ACANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMYMKCGMVEDGCLVFERMV 453
Query: 294 NIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ 353
+ + G+ N Y NA+++F +ML PD T+ +LSACS +E G++
Sbjct: 454 ERDVVSWNAMIVGYAQNGYGTNALEIFRKMLVSGQKPDHVTMIGVLSACSHAGLVEEGRR 513
Query: 354 -VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHAR-LAYKRISTPDLVSQNAMLTAYAMH 411
H+ G T +VD+ + G L A L PD V ++L A +H
Sbjct: 514 YFHSMRTELGLAPMKDHFTCMVDLLGRAGCLDEANDLIQTMPMQPDNVVWGSLLAACKVH 573
Query: 412 GHGKEG 417
G+ + G
Sbjct: 574 GNIELG 579
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 113/396 (28%), Positives = 187/396 (47%), Gaps = 41/396 (10%)
Query: 93 NARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIF 152
++ + +L +C R + + H I + F S F+ N LVD Y +CG A K+F
Sbjct: 18 DSSPFAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKVF 77
Query: 153 SKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYD 212
+ +N S N ++ + G + EA +F M + SWN+M+SG+ + ++
Sbjct: 78 DRMPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMP----EPDQCSWNAMVSGFAQHDRFE 133
Query: 213 EAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGAL 272
EA F D+ D + ++FGS L ACA + L G +IHAL D ++G AL
Sbjct: 134 EALRFFVDMHSEDFV-LNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSAL 192
Query: 273 VEMYCRYQDLVAAQMAFD--EIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTP 330
V+MY + + AQ AFD + NI + + +E N A+++F M+ + P
Sbjct: 193 VDMYSKCGVVACAQRAFDGMAVRNIVSWNSLIT--CYEQNGPAGKALEVFVMMMDNGVEP 250
Query: 331 DIYTVGIILSACSSLATMERGKQVHAYAI-RCGYDSDVHIGTALVDMYAKCGSLKHARLA 389
D T+ ++SAC+S + + G Q+HA + R Y +D+ +G ALVDMYAKC + ARL
Sbjct: 251 DEITLASVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLV 310
Query: 390 YKRISTPDLVSQ-------------------------------NAMLTAYAMHGHGKEGI 418
+ R+ ++VS+ NA++ Y +G +E +
Sbjct: 311 FDRMPLRNVVSETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAV 370
Query: 419 AHFRRILASGFRPDHISFLSALSACVHAGSIKTGSE 454
F + P H +F + L+AC + +K G +
Sbjct: 371 RLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQ 406
>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
Length = 743
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 212/598 (35%), Positives = 351/598 (58%), Gaps = 12/598 (2%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y K G++ A+ VF MP+ + SWN++++A + +G + E M + D VS
Sbjct: 50 YSKLGNITYARHVFDKMPQPNSFSWNTMLSAYSKSGDLSTMQEIFSIMPNRDG-----VS 104
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEG-LEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
W+++I G+ G EA+ M +G L N T S++L + + LG++ HG I
Sbjct: 105 WNSLISGYVCYGSVVEAVKTYNSMMKDGVLNLNRITFSTMLLLVSSQGCVDLGRQIHGQI 164
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ GF + FV + LVD+Y + G + A ++F + +N V NT+I G +G V +++
Sbjct: 165 VKFGFGAYVFVGSSLVDMYAKMGLVSVASQVFDEVQERNVVMYNTMITGLLRSGMVKDSK 224
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LF M+ +R ISW +MI+G + N L EA +FRD+ ++G+ +TFGSVL A
Sbjct: 225 RLFHGMK----ERDSISWTTMITGLIQNGLEAEAMDLFRDM-RQEGMAMDQYTFGSVLTA 279
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C + +L++GKEIH L I G + FVG ALV+MYC+ + + A+ F + N +
Sbjct: 280 CGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKCRSVRYAEAVFKRMANKNVVSW 339
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G+ N ++ A+++F +M + PD +T+G ++S+C++LA++E G Q H A+
Sbjct: 340 TAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCANLASLEEGAQFHCQALV 399
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
G S + + AL+ +Y KCGS++ + + +S D VS A+++ YA G E I
Sbjct: 400 SGLISFITVSNALITLYGKCGSIEDSNQLFDEMSFRDEVSWTALVSGYAQFGKANETIDL 459
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFD-LMAYYDVKPSLKHYTCMVDLLS 479
F R+L G +PD ++F++ LSAC AG ++ G ++F+ ++ + + P HYTCM+DL
Sbjct: 460 FERMLVQGLKPDAVTFIAVLSACSRAGLVERGQQYFESMLKDHGIIPFSDHYTCMIDLFG 519
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
RAG L EA FI K+P +PDS+ W LL C +GN E G+ AA+ L+EL+P N Y++
Sbjct: 520 RAGRLEEAKNFINKMPFSPDSIGWATLLSSCRLYGNEEIGKWAAESLLELDPQNPAGYIL 579
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
L++++A G+WS++A+ R+ M+++ K PG SWI+ + +++ F A D+S S++IY
Sbjct: 580 LSSIYAAKGKWSNVAQLRRGMREKGARKEPGFSWIKYKSKVYIFSADDQSSPFSDQIY 637
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 141/532 (26%), Positives = 247/532 (46%), Gaps = 87/532 (16%)
Query: 104 CARLQKLSLGKEFHGYITRNGFMSNP--FVVNGLVDVYRRCGDMLSALKIFSKFSIKNEV 161
C + + K+ H I ++ ++NP F+ N L++ Y + G++ A +F K N
Sbjct: 15 CCETRNQTQAKKLHCLIIKS--LTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSF 72
Query: 162 SCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDL 221
S NT++ Y ++G+++ +E+F M + R +SWNS+ISGYV EA +
Sbjct: 73 SWNTMLSAYSKSGDLSTMQEIFSIMPN----RDGVSWNSLISGYVCYGSVVEAVKTYNS- 127
Query: 222 LMRDGI-EPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQ 280
+M+DG+ TF ++L+ + + G++IH + G + FVG +LV+MY +
Sbjct: 128 MMKDGVLNLNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMG 187
Query: 281 DLVAAQMAFDEIE---------------------NIENLLGKMKE----------DGFEP 309
+ A FDE++ + + L MKE G
Sbjct: 188 LVSVASQVFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQ 247
Query: 310 NVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHI 369
N AM LF +M + D YT G +L+AC L ++ GK++H IR GY+ +V +
Sbjct: 248 NGLEAEAMDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFV 307
Query: 370 GTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGF 429
G+ALVDMY KC S+++A +KR++ ++VS AML Y +G +E + F + +G
Sbjct: 308 GSALVDMYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGI 367
Query: 430 RPDHISFLSALSACVHAGSIKTGSEF---------------------------------- 455
PD + S +S+C + S++ G++F
Sbjct: 368 EPDDFTLGSVISSCANLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQ 427
Query: 456 -FDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKI---PMAPDSVMWGALLGGCV 511
FD M++ D +T +V ++ G+ E + +++ + PD+V + A+L C
Sbjct: 428 LFDEMSFRDEVS----WTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACS 483
Query: 512 SHGNLEFGQIAADRLIE---LEPNNTGNYVMLANLFAYAGRWSDLARTRQKM 560
G +E GQ + +++ + P + +Y + +LF AGR + KM
Sbjct: 484 RAGLVERGQQYFESMLKDHGIIP-FSDHYTCMIDLFGRAGRLEEAKNFINKM 534
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 122/419 (29%), Positives = 200/419 (47%), Gaps = 43/419 (10%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G + A +VF + ER+ V +N+++T +G+V ++ M D+ +
Sbjct: 182 MYAKMGLVSVASQVFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDS-----I 236
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ +I G QNG + EA+ + M+ EG+ + T SVL AC L+ L GKE H I
Sbjct: 237 SWTTMITGLIQNGLEAEAMDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLI 296
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R+G+ N FV + LVD+Y +C + A +F + + KN VS ++VGY +NG EA
Sbjct: 297 IRSGYNHNVFVGSALVDMYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAV 356
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+F M+ R+GIEP FT GSV+ +
Sbjct: 357 RVFCDMQ------------------------------------RNGIEPDDFTLGSVISS 380
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA++ SL +G + H A+ GL S V AL+ +Y + + + FDE+ + +
Sbjct: 381 CANLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMSFRDEVSW 440
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G+ + LF ML L PD T +LSACS +ERG+Q ++
Sbjct: 441 TALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVERGQQYFESMLK 500
Query: 361 -CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNAMLTAYAMHGHGKEG 417
G T ++D++ + G L+ A+ ++ +PD + +L++ ++G+ + G
Sbjct: 501 DHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLSSCRLYGNEEIG 559
>gi|356502620|ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Glycine max]
Length = 785
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 214/635 (33%), Positives = 342/635 (53%), Gaps = 44/635 (6%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y K GS DA ++F MP + SWN++++A A G + A + + P+ V
Sbjct: 57 LYVKTGSSSDAHRLFDEMPLKTTFSWNTILSAHAKAGNLDSARRVFDEIPQ-----PDSV 111
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ +I G+ G + A+ RM + G+ P T ++VL +CA Q L +GK+ H ++
Sbjct: 112 SWTTMIVGYNHLGLFKSAVHAFLRMVSSGISPTQFTFTNVLASCAAAQALDVGKKVHSFV 171
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G V N L+++Y +CGD + A +F + +K+ + NT+I + + A
Sbjct: 172 VKLGQSGVVPVANSLLNMYAKCGDSVMAKVVFDRMRLKDTSTWNTMISMHMQFCQFDLAL 231
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LFDQM I+SWNS+I+GY A F +L ++P FT GSVL A
Sbjct: 232 ALFDQM----TDPDIVSWNSIITGYCHQGYDIRALETFSFMLKSSSLKPDKFTLGSVLSA 287
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCR---------------------- 278
CA+ SL+ GK+IHA + + VG AL+ MY +
Sbjct: 288 CANRESLKLGKQIHAHIVRADVDIAGAVGNALISMYAKSGAVEVAHRIVEITGTPSLNVI 347
Query: 279 -----------YQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLD 327
D+ A+ FD +++ + + G+ N +A+ LF M+
Sbjct: 348 AFTSLLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMIVGYAQNGLISDALVLFRLMIREG 407
Query: 328 LTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHAR 387
P+ YT+ +LS SSLA+++ GKQ+HA AIR S V +G AL+ MY++ GS+K AR
Sbjct: 408 PKPNNYTLAAVLSVISSLASLDHGKQLHAVAIRLEEVSSVSVGNALITMYSRSGSIKDAR 467
Query: 388 LAYKRI-STPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHA 446
+ I S D ++ +M+ + A HG G E I F ++L +PDHI+++ LSAC H
Sbjct: 468 KIFNHICSYRDTLTWTSMILSLAQHGLGNEAIELFEKMLRINLKPDHITYVGVLSACTHV 527
Query: 447 GSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGA 505
G ++ G +F+LM ++++P+ HY CM+DLL RAG L EAY FI+ +P+ PD V WG+
Sbjct: 528 GLVEQGKSYFNLMKNVHNIEPTSSHYACMIDLLGRAGLLEEAYNFIRNMPIEPDVVAWGS 587
Query: 506 LLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRM 565
LL C H ++ ++AA++L+ ++PNN+G Y+ LAN + G+W D A+ R+ MKD+ +
Sbjct: 588 LLSSCRVHKYVDLAKVAAEKLLLIDPNNSGAYLALANTLSACGKWEDAAKVRKSMKDKAV 647
Query: 566 HKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTII 600
K G SW++ ++++H F D H + + IY +I
Sbjct: 648 KKEQGFSWVQIKNKVHIFGVEDALHPQRDAIYCMI 682
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 121/469 (25%), Positives = 215/469 (45%), Gaps = 71/469 (15%)
Query: 112 LGKEFHGYITRNGFMS-NPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGY 170
+G+ H I ++G F+ N L+++Y + G A ++F + +K S NTI+ +
Sbjct: 30 IGRCIHARIIKHGLRYLGVFLTNNLLNLYVKTGSSSDAHRLFDEMPLKTTFSWNTILSAH 89
Query: 171 CENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPT 230
+ GN+ AR +FD++ Q +SW +MI GY L+ A F ++ GI PT
Sbjct: 90 AKAGNLDSARRVFDEIP----QPDSVSWTTMIVGYNHLGLFKSAVHAFLRMV-SSGISPT 144
Query: 231 SFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFD 290
FTF +VL +CA +L GK++H+ + LG V +L+ MY + D V A++ FD
Sbjct: 145 QFTFTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMAKVVFD 204
Query: 291 EIE----NIENLLGKMK-------------EDGFEPNVYTWN--------------AMQL 319
+ + N + M + +P++ +WN A++
Sbjct: 205 RMRLKDTSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQGYDIRALET 264
Query: 320 FSEML-SLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYA 378
FS ML S L PD +T+G +LSAC++ +++ GKQ+HA+ +R D +G AL+ MYA
Sbjct: 265 FSFMLKSSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAGAVGNALISMYA 324
Query: 379 KCGSLKHARLAYKRISTP---------------------------------DLVSQNAML 405
K G+++ A + TP D+V+ AM+
Sbjct: 325 KSGAVEVAHRIVEITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMI 384
Query: 406 TAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVK 465
YA +G + + FR ++ G +P++ + + LS S+ G + + +
Sbjct: 385 VGYAQNGLISDALVLFRLMIREGPKPNNYTLAAVLSVISSLASLDHGKQLHAVAIRLEEV 444
Query: 466 PSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
S+ ++ + SR+G + +A + I D++ W +++ HG
Sbjct: 445 SSVSVGNALITMYSRSGSIKDARKIFNHICSYRDTLTWTSMILSLAQHG 493
>gi|308080264|ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea mays]
gi|238013832|gb|ACR37951.1| unknown [Zea mays]
gi|413938826|gb|AFW73377.1| hypothetical protein ZEAMMB73_579690 [Zea mays]
Length = 745
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 216/599 (36%), Positives = 343/599 (57%), Gaps = 13/599 (2%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
YGK G A++VF P + ++N++++ A L+ + M+ D VS
Sbjct: 51 YGKAGRHARARRVFDATPHPNLFTYNALLSTLAHARLLDDMDSLFASMAQRDT-----VS 105
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEG--LEPNARTLSSVLPACARLQKLSLGKEFHGY 119
++AVI GF+ G A+ + + G + P+ T+S+++ A + L +LG++FH
Sbjct: 106 YNAVIAGFSGGGAHARAVRLYHTLLRAGSSVRPSRITMSAMVMAASALGDRALGRQFHCQ 165
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
I R GF N FV + LV +Y + G + A ++F + KN V NT+I G V EA
Sbjct: 166 ILRLGFGVNAFVGSPLVGMYAKMGLIGDAKRVFDEMDGKNVVMYNTMITGLLRCKMVEEA 225
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
R LF+ M R I+W +M++G+ N L +A + FR + + GI +TFGS+L
Sbjct: 226 RRLFEVM----TDRDCITWTTMVTGFTQNGLESQALNFFRRMRFQ-GIAIDQYTFGSILT 280
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
AC +++L +GK+IHA I + FVG ALV+MY + + + A+ AF + +
Sbjct: 281 ACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRMSCKNIIS 340
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
G+ N + A+++FSEM + PD +T+G ++S+C++LA++E G Q H A+
Sbjct: 341 WTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLEEGAQFHCLAL 400
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
G + + ALV +Y KCGS++ A + + D VS A++T YA G KE I
Sbjct: 401 VSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVSWTALVTGYAQFGRAKETID 460
Query: 420 HFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLL 478
F ++LA +PD ++F+ LSAC AG ++ G +F M + + P HYTCM+DL
Sbjct: 461 LFEKMLAKDVKPDGVTFIGVLSACSRAGFVEKGCSYFHSMQKDHGIVPIDDHYTCMIDLY 520
Query: 479 SRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYV 538
SR+G L EA EFIK++PM PD++ WG LL C G++E GQ AA+ L+E++P N +YV
Sbjct: 521 SRSGRLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDMEIGQWAAENLLEIDPQNPASYV 580
Query: 539 MLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
+L ++ A G W+ +A+ R+ M+DR++ K PGCSWI+ ++++H F A D+SH S+ IY
Sbjct: 581 LLCSMHATKGNWNQVAQLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSKGIY 639
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 127/414 (30%), Positives = 197/414 (47%), Gaps = 43/414 (10%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G + DAK+VF M ++ V +N+++T +V EA E M+ D +
Sbjct: 184 MYAKMGLIGDAKRVFDEMDGKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRD-----CI 238
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+ ++ GFTQNG + +A+ RM+ +G+ + T S+L AC L L GK+ H YI
Sbjct: 239 TWTTMVTGFTQNGLESQALNFFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYI 298
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R + N FV + LVD+Y +C + A F + S KN +S +IVGY +NG EA
Sbjct: 299 IRTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRMSCKNIISWTALIVGYGQNGCSEEAV 358
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+F +M+ RDGI+P FT GSV+ +
Sbjct: 359 RVFSEMQ------------------------------------RDGIDPDDFTLGSVISS 382
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA++ SL +G + H LA+ GL V ALV +Y + + A FDE+ + +
Sbjct: 383 CANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVSW 442
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG-KQVHAYAI 359
G+ + LF +ML+ D+ PD T +LSACS +E+G H+
Sbjct: 443 TALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVEKGCSYFHSMQK 502
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST-PDLVSQNAMLTAYAMHG 412
G T ++D+Y++ G LK A K++ PD + +L+A + G
Sbjct: 503 DHGIVPIDDHYTCMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLLSACRLRG 556
>gi|242082165|ref|XP_002445851.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
gi|241942201|gb|EES15346.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
Length = 1084
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 209/581 (35%), Positives = 325/581 (55%), Gaps = 43/581 (7%)
Query: 22 DCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGM 81
C N++++ A + ++ A+ +RM D +SW++VI G T NG + EAI +
Sbjct: 444 QCAVCNALISFYAKSNMIDNAVLVFDRMPHQDT-----ISWNSVISGCTSNGLNSEAIEL 498
Query: 82 LFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRR 141
RM +G E ++ TL SVLPACAR +G+ HGY + G + + N L+D+Y
Sbjct: 499 FVRMWMQGHELDSTTLLSVLPACARSHYWFVGRVVHGYSVKTGLIGETSLANALLDMYSN 558
Query: 142 CGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSM 201
C D S +IF + KN ++SW +M
Sbjct: 559 CSDWHSTNQIFRNMAQKN-----------------------------------VVSWTAM 583
Query: 202 ISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALG 261
I+ Y L+D+ + +++++ DGI+P F SVL A SL++GK +H AI G
Sbjct: 584 ITSYTRAGLFDKVAGLLQEMVL-DGIKPDVFAVTSVLHGFAGDESLKQGKSVHGYAIRNG 642
Query: 262 LQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFS 321
++ V AL+EMY +++ A++ FD + N + + G+ N + + LFS
Sbjct: 643 MEKLLPVANALMEMYVNCRNMEEARLVFDHVTNKDIISWNTLIGGYSRNNFANESFSLFS 702
Query: 322 EMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCG 381
+ML L P+ T+ IL A +S++++ERG+++HAYA+R G+ D + ALVDMY KCG
Sbjct: 703 DML-LQFKPNTVTMTCILPAVASISSLERGREIHAYALRRGFLEDSYTSNALVDMYVKCG 761
Query: 382 SLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALS 441
+L AR+ + R++ +L+S M+ Y MHG GK+ +A F ++ SG PD SF + L
Sbjct: 762 ALLVARVLFDRLTKKNLISWTIMIAGYGMHGCGKDAVALFEQMRGSGVEPDTASFSAILY 821
Query: 442 ACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDS 500
AC H+G G +FF+ M Y ++P LKHYTC+VDLLS G L EA+EFI+ +P+ PDS
Sbjct: 822 ACCHSGLTAEGWKFFNAMRKEYKIEPKLKHYTCIVDLLSHTGNLKEAFEFIESMPIEPDS 881
Query: 501 VMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKM 560
+W +LL GC H +++ + ADR+ +LEP NTG YV+LAN++A A RW + + + K+
Sbjct: 882 SIWVSLLHGCRIHRDVKLAEKVADRVFKLEPENTGYYVLLANIYAEAERWEAVKKLKNKI 941
Query: 561 KDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
R + ++ GCSWIE R ++H F A +R+H I +D
Sbjct: 942 GGRGLRENTGCSWIEVRGKVHVFIADNRNHPEWNRIAEFLD 982
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 121/472 (25%), Positives = 200/472 (42%), Gaps = 91/472 (19%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y KCG L A+ VF MP R ++
Sbjct: 140 YLKCGDLGGARMVFDEMPPR----------------------------------VADVRV 165
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W++++ + + G +E + + +MQ G+ P+A +S VL A L ++ G+ HG +
Sbjct: 166 WTSLMSAYAKAGDFQEGVSLFRQMQCCGVSPDAHAVSCVLKCIASLGSITEGEVIHGLLE 225
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
+ G V N L+ +Y RCG M A+++F ++ +S N+ I GY NG A +
Sbjct: 226 KLGLGEACAVANALIALYSRCGCMEDAMQVFDSMHARDAISWNSTISGYFSNGWHDRAVD 285
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
LF +M W+ +G E +S T SVL AC
Sbjct: 286 LFSKM-----------WS-------------------------EGTEISSVTVLSVLPAC 309
Query: 242 ADMNSLRKGKEIHALAIALGL-------QS--DTFVGGALVEMYCRYQDLVAAQMAFDEI 292
A++ GK +H ++ GL QS D +G LV MY + D+ +A+ FD +
Sbjct: 310 AELGFELVGKVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAM 369
Query: 293 ENIENL-LGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG 351
+ N+ + + G+ ++ LF +M L +TPD + + +L + L+ G
Sbjct: 370 PSKGNVHVWNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALSCLLKCITCLSCARDG 429
Query: 352 KQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMH 411
H Y ++ G+ + + AL+ YAK + +A L + R+ D +S N++++ +
Sbjct: 430 LVAHGYLVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQDTISWNSVISGCTSN 489
Query: 412 GHGKEGIAHFRRILASGFRPDHISFLSALSAC-----------VHAGSIKTG 452
G E I F R+ G D + LS L AC VH S+KTG
Sbjct: 490 GLNSEAIELFVRMWMQGHELDSTTLLSVLPACARSHYWFVGRVVHGYSVKTG 541
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 126/560 (22%), Positives = 225/560 (40%), Gaps = 70/560 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y +CG ++DA +VF M RD +S
Sbjct: 242 LYSRCGCMEDAMQVFDSMHARDAIS----------------------------------- 266
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
W++ I G+ NG+ + A+ + +M +EG E ++ T+ SVLPACA L +GK HGY
Sbjct: 267 -WNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAELGFELVGKVVHGYS 325
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
++G + + V +D E + ++ Y + G++ AR
Sbjct: 326 MKSGLLWDLESVQSGID----------------------EALGSKLVFMYVKCGDMGSAR 363
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+FD M G + WN ++ GY + ++E+ +F + GI P +L
Sbjct: 364 RVFDAMPSKG---NVHVWNLIMGGYAKAAEFEESLLLFEQM-HELGITPDEHALSCLLKC 419
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
++ R G H + LG + V AL+ Y + + A + FD + + + +
Sbjct: 420 ITCLSCARDGLVAHGYLVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQDTISW 479
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G N A++LF M D T+ +L AC+ G+ VH Y+++
Sbjct: 480 NSVISGCTSNGLNSEAIELFVRMWMQGHELDSTTLLSVLPACARSHYWFVGRVVHGYSVK 539
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
G + + AL+DMY+ C ++ ++ ++VS AM+T+Y G +
Sbjct: 540 TGLIGETSLANALLDMYSNCSDWHSTNQIFRNMAQKNVVSWTAMITSYTRAGLFDKVAGL 599
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSR 480
+ ++ G +PD + S L S+K G ++ L ++++
Sbjct: 600 LQEMVLDGIKPDVFAVTSVLHGFAGDESLKQGKSVHGYAIRNGMEKLLPVANALMEMYVN 659
Query: 481 AGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNL--EFGQIAADRLIELEPNNTGNYV 538
+ EA + D + W L+GG S N E + +D L++ +PN V
Sbjct: 660 CRNMEEARLVFDHV-TNKDIISWNTLIGG-YSRNNFANESFSLFSDMLLQFKPNT----V 713
Query: 539 MLANLFAYAGRWSDLARTRQ 558
+ + S L R R+
Sbjct: 714 TMTCILPAVASISSLERGRE 733
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 98/387 (25%), Positives = 168/387 (43%), Gaps = 74/387 (19%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY C ++F+ M +++ VSW +++T+
Sbjct: 555 MYSNCSDWHSTNQIFRNMAQKNVVSWTAMITS---------------------------- 586
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+T+ G ++ G+L M +G++P+ ++SVL A + L GK HGY
Sbjct: 587 --------YTRAGLFDKVAGLLQEMVLDGIKPDVFAVTSVLHGFAGDESLKQGKSVHGYA 638
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
RNG V N L+++Y C +M A +F + K+ +S NT+I GY
Sbjct: 639 IRNGMEKLLPVANALMEMYVNCRNMEEARLVFDHVTNKDIISWNTLIGGYSR-------- 690
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
N+ +E+FS+F D+L++ +P + T +L A
Sbjct: 691 ---------------------------NNFANESFSLFSDMLLQ--FKPNTVTMTCILPA 721
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
A ++SL +G+EIHA A+ G D++ ALV+MY + L+ A++ FD + +
Sbjct: 722 VASISSLERGREIHAYALRRGFLEDSYTSNALVDMYVKCGALLVARVLFDRLTKKNLISW 781
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACS-SLATMERGKQVHAYAI 359
+ G+ + +A+ LF +M + PD + IL AC S T E K +A
Sbjct: 782 TIMIAGYGMHGCGKDAVALFEQMRGSGVEPDTASFSAILYACCHSGLTAEGWKFFNAMRK 841
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHA 386
+ + T +VD+ + G+LK A
Sbjct: 842 EYKIEPKLKHYTCIVDLLSHTGNLKEA 868
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 82/181 (45%), Gaps = 6/181 (3%)
Query: 338 ILSACSSLATMERGKQVHAYAIRCGYDSDVH--IGTALVDMYAKCGSLKHARLAYKRIS- 394
++ C ++E ++ HA +R G + +G LV Y KCG L AR+ + +
Sbjct: 100 VVQLCGEERSLEAARRAHAL-VRAGTGGIIGSVLGKRLVLAYLKCGDLGGARMVFDEMPP 158
Query: 395 -TPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGS 453
D+ ++++AYA G +EG++ FR++ G PD + L GSI G
Sbjct: 159 RVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCGVSPDAHAVSCVLKCIASLGSITEGE 218
Query: 454 EFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSH 513
L+ + + ++ L SR G + +A + + A D++ W + + G S+
Sbjct: 219 VIHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQVFDSM-HARDAISWNSTISGYFSN 277
Query: 514 G 514
G
Sbjct: 278 G 278
>gi|15225445|ref|NP_178983.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206168|sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600
gi|4558664|gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana]
gi|330251150|gb|AEC06244.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 211/640 (32%), Positives = 339/640 (52%), Gaps = 82/640 (12%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y KCGSL+D ++VF MP+R+ +WNSVVT G + EA M D T
Sbjct: 65 YSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCT----- 119
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W++++ GF Q+ EEA+ M EG N + +SVL AC+ L ++ G + H I
Sbjct: 120 WNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIA 179
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
++ F+S+ ++ + LVD+Y +CG++ A ++F + +N VS N++I + +NG EA +
Sbjct: 180 KSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALD 239
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
+F M + +EP T SV+ AC
Sbjct: 240 VFQMM------------------------------------LESRVEPDEVTLASVISAC 263
Query: 242 ADMNSLRKGKEIHALAIAL-GLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
A +++++ G+E+H + L++D + A V+MY + + A+ FD + I N++
Sbjct: 264 ASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMP-IRNVIA 322
Query: 301 K------------------MKEDGFEPNVYTWN--------------AMQLFSEMLSLDL 328
+ M E NV +WN A+ LF + +
Sbjct: 323 ETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESV 382
Query: 329 TPDIYTVGIILSACSSLATMERGKQVHAYAIRCGY------DSDVHIGTALVDMYAKCGS 382
P Y+ IL AC+ LA + G Q H + ++ G+ + D+ +G +L+DMY KCG
Sbjct: 383 CPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGC 442
Query: 383 LKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSA 442
++ L ++++ D VS NAM+ +A +G+G E + FR +L SG +PDHI+ + LSA
Sbjct: 443 VEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSA 502
Query: 443 CVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSV 501
C HAG ++ G +F M + V P HYTCMVDLL RAG L EA I+++PM PDSV
Sbjct: 503 CGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSV 562
Query: 502 MWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMK 561
+WG+LL C H N+ G+ A++L+E+EP+N+G YV+L+N++A G+W D+ R+ M+
Sbjct: 563 IWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMR 622
Query: 562 DRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
+ K PGCSWI+ + H F D+SH R ++I++++D
Sbjct: 623 KEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLD 662
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 126/421 (29%), Positives = 207/421 (49%), Gaps = 52/421 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG+++DA++VF M +R+ VSWNS++T NG +EAL+
Sbjct: 196 MYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALD---------------- 239
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEG-LEPNARTLSSVLPACARLQKLSLGKEFHGY 119
+F+M E +EP+ TL+SV+ ACA L + +G+E HG
Sbjct: 240 ---------------------VFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGR 278
Query: 120 ITRNGFMSNPFVV-NGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
+ +N + N ++ N VD+Y +C + A IF I+N ++ ++I GY +
Sbjct: 279 VVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKA 338
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
AR +F +M +R ++SWN++I+GY N +EA S+F LL R+ + PT ++F ++L
Sbjct: 339 ARLMFTKM----AERNVVSWNALIAGYTQNGENEEALSLFC-LLKRESVCPTHYSFANIL 393
Query: 239 IACADMNSLRKGKEIHALAIALGL------QSDTFVGGALVEMYCRYQDLVAAQMAFDEI 292
ACAD+ L G + H + G + D FVG +L++MY + + + F ++
Sbjct: 394 KACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKM 453
Query: 293 ENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGK 352
+ + GF N Y A++LF EML PD T+ +LSAC +E G+
Sbjct: 454 MERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGR 513
Query: 353 QVHAYAIR-CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNAMLTAYAM 410
+ R G T +VD+ + G L+ A+ + + PD V ++L A +
Sbjct: 514 HYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKV 573
Query: 411 H 411
H
Sbjct: 574 H 574
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 132/504 (26%), Positives = 235/504 (46%), Gaps = 67/504 (13%)
Query: 92 PNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKI 151
P A+ L S + + +L + + + H + ++GF + F+ N L+D Y +CG + ++
Sbjct: 21 PFAKLLDSCIKS--KLSAIYV-RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQV 77
Query: 152 FSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLY 211
F K +N + N+++ G + G + EA LF M +R +WNSM+SG+ +
Sbjct: 78 FDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMP----ERDQCTWNSMVSGFAQHDRC 133
Query: 212 DEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGA 271
+EA F ++ ++G ++F SVL AC+ +N + KG ++H+L SD ++G A
Sbjct: 134 EEALCYFA-MMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSA 192
Query: 272 LVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPD 331
LV+MY + ++ AQ FDE+ + + FE N A+ +F ML + PD
Sbjct: 193 LVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPD 252
Query: 332 IYTVGIILSACSSLATMERGKQVHAYAIRC-GYDSDVHIGTALVDMYAKC---------- 380
T+ ++SAC+SL+ ++ G++VH ++ +D+ + A VDMYAKC
Sbjct: 253 EVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIF 312
Query: 381 ---------------------GSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
S K ARL + +++ ++VS NA++ Y +G +E ++
Sbjct: 313 DSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALS 372
Query: 420 HFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKH--------- 470
F + P H SF + L AC + G + A+ V LKH
Sbjct: 373 LFCLLKRESVCPTHYSFANILKACADLAELHLG-----MQAHVHV---LKHGFKFQSGEE 424
Query: 471 -----YTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADR 525
++D+ + G + E Y +K+ M D V W A++ G +G +G A +
Sbjct: 425 DDIFVGNSLIDMYVKCGCVEEGYLVFRKM-MERDCVSWNAMIIGFAQNG---YGNEALEL 480
Query: 526 LIE-LEPNNTGNYVMLANLFAYAG 548
E LE +++ + + + G
Sbjct: 481 FREMLESGEKPDHITMIGVLSACG 504
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 142/292 (48%), Gaps = 45/292 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC + +A+ +F MP R+ ++ S+++ A A +M+ N+V
Sbjct: 298 MYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAE-----RNVV 352
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A+I G+TQNG +EEA+ + ++ E + P + +++L ACA L +L LG + H ++
Sbjct: 353 SWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHV 412
Query: 121 TRNGFM------SNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
++GF + FV N L+D+Y +CG + +F K ++ VS N +I+G+ +NG
Sbjct: 413 LKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNG 472
Query: 175 NVAEARELFDQMEHLG--------------------VQRGIISWNSMISGYVDNSLYDEA 214
EA ELF +M G V+ G ++SM + L D
Sbjct: 473 YGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDH- 531
Query: 215 FSMFRDLLMRDG-------------IEPTSFTFGSVLIACADMNSLRKGKEI 253
++ DLL R G ++P S +GS+L AC ++ GK +
Sbjct: 532 YTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYV 583
>gi|356561853|ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 748
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 202/581 (34%), Positives = 326/581 (56%), Gaps = 37/581 (6%)
Query: 57 PNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEF 116
P L S+S++I F ++ + + + L P+A L S + +CA L+ L G++
Sbjct: 67 PTLFSFSSLIHAFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRALDPGQQL 126
Query: 117 HGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNV 176
H + +GF+++ V + L +Y +C +L A K+F + ++ V + +I GY G V
Sbjct: 127 HAFAAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRLGLV 186
Query: 177 AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGS 236
EA+ELF +M GV+ ++SWN M++G+ +N YDEA MFR +L++ G P T
Sbjct: 187 EEAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQ-GFWPDGSTVSC 245
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
VL A + + G ++H I GL SD FV A+++MY + + FDE+E +E
Sbjct: 246 VLPAVGCLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEME 305
Query: 297 ---------------------NLLGKMKEDGFEPNVYTWN--------------AMQLFS 321
+ K K+ E NV TW A++LF
Sbjct: 306 IGSLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALELFR 365
Query: 322 EMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCG 381
+M + + P+ T+ ++ AC +++ + GK++H +++R G DV++G+AL+DMYAKCG
Sbjct: 366 DMQAYGVEPNAVTIPSLIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSALIDMYAKCG 425
Query: 382 SLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALS 441
++ AR + ++S +LVS NA++ YAMHG KE + F +L SG +PD ++F LS
Sbjct: 426 RIQLARRCFDKMSALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFTCVLS 485
Query: 442 ACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDS 500
AC G + G ++ M+ + ++P ++HY C+V LLSR G+L EAY IK++P PD+
Sbjct: 486 ACAQNGLTEEGWRCYNSMSEEHGIEPKMEHYACLVTLLSRVGKLEEAYSIIKEMPFEPDA 545
Query: 501 VMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKM 560
+WGALL C H NL G+IAA++L LEP N GNY++L+N++A G W + R R+ M
Sbjct: 546 CVWGALLSSCRVHNNLSLGEIAAEKLFFLEPTNPGNYILLSNIYASKGLWDEENRIREVM 605
Query: 561 KDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
K + + K+PG SWIE ++H A D+SH + ++I +D
Sbjct: 606 KSKGLRKNPGYSWIEVGHKVHMLLAGDQSHPQMKDILEKLD 646
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 129/413 (31%), Positives = 220/413 (53%), Gaps = 4/413 (0%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC + DA+K+F MP+RD V W++++ + GLV EA E M S E PNLV
Sbjct: 148 MYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRLGLVEEAKELFGEMRSGGVE-PNLV 206
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ ++ GF NG+ +EA+GM M +G P+ T+S VLPA L+ + +G + HGY+
Sbjct: 207 SWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTVSCVLPAVGCLEDVVVGAQVHGYV 266
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G S+ FVV+ ++D+Y +CG + ++F + S N + G NG V A
Sbjct: 267 IKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEMEIGSLNAFLTGLSRNGMVDTAL 326
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
E+F++ + ++ +++W S+I+ N EA +FRD + G+EP + T S++ A
Sbjct: 327 EVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALELFRD-MQAYGVEPNAVTIPSLIPA 385
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C ++++L GKEIH ++ G+ D +VG AL++MY + + A+ FD++ + +
Sbjct: 386 CGNISALMHGKEIHCFSLRRGIFDDVYVGSALIDMYAKCGRIQLARRCFDKMSALNLVSW 445
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVH-AYAI 359
G+ + M++F ML PD+ T +LSAC+ E G + + + +
Sbjct: 446 NAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFTCVLSACAQNGLTEEGWRCYNSMSE 505
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNAMLTAYAMH 411
G + + LV + ++ G L+ A K + PD A+L++ +H
Sbjct: 506 EHGIEPKMEHYACLVTLLSRVGKLEEAYSIIKEMPFEPDACVWGALLSSCRVH 558
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 129/292 (44%), Gaps = 21/292 (7%)
Query: 246 SLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAF--------DEIENIEN 297
SL + ++ HAL + L L SDT + +L+ Y L Q++ + + +
Sbjct: 15 SLSQARQAHALILRLNLFSDTQLTTSLLSFYANALSLSTPQLSLTLSSHLPHPTLFSFSS 74
Query: 298 LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAY 357
L+ P+V T FS + L L PD + + + +C+SL ++ G+Q+HA+
Sbjct: 75 LIHAFARSHHFPHVLT-----TFSHLHPLRLIPDAFLLPSAIKSCASLRALDPGQQLHAF 129
Query: 358 AIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEG 417
A G+ +D + ++L MY KC + AR + R+ D+V +AM+ Y+ G +E
Sbjct: 130 AAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRLGLVEEA 189
Query: 418 IAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDL 477
F + + G P+ +S+ L+ + G F +M P +C++
Sbjct: 190 KELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTVSCVLPA 249
Query: 478 LSRAGEL---GEAYEFIKKIPMAPDSVMWGALLG-----GCVSHGNLEFGQI 521
+ ++ + + ++ K + D + A+L GCV + F ++
Sbjct: 250 VGCLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEV 301
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 90/213 (42%), Gaps = 14/213 (6%)
Query: 339 LSAC--SSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAY---KRI 393
LS C SS A++ + +Q HA +R SD + T+L+ YA SL +L+ +
Sbjct: 5 LSQCLSSSTASLSQARQAHALILRLNLFSDTQLTTSLLSFYANALSLSTPQLSLTLSSHL 64
Query: 394 STPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGS 453
P L S ++++ A+A H + F + PD SA+ +C ++ G
Sbjct: 65 PHPTLFSFSSLIHAFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRALDPGQ 124
Query: 454 EFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSH 513
+ A + + + + + +A + ++P D V+W A++ G
Sbjct: 125 QLHAFAAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMP-DRDVVVWSAMIAGYSRL 183
Query: 514 GNLE-----FGQIAADRLIELEPNNTGNYVMLA 541
G +E FG++ R +EPN MLA
Sbjct: 184 GLVEEAKELFGEM---RSGGVEPNLVSWNGMLA 213
>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 211/617 (34%), Positives = 337/617 (54%), Gaps = 76/617 (12%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERM---SSLDNETP- 57
Y CG L + ++VF M +++ WN +V+ A G E++ CL ++ ++ + P
Sbjct: 144 YATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESI-CLFKIMVEKGIEGKRPE 202
Query: 58 ------------NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACA 105
+++SW+++I G+ NG E +G+ +M G++ + T+ SVL CA
Sbjct: 203 SAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCA 262
Query: 106 RLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNT 165
LSLGK H ++ F N L+D+Y +CGD+ AL++F K
Sbjct: 263 NSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMG--------- 313
Query: 166 IIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRD 225
+R ++SW SMI+GY + D A + + + ++
Sbjct: 314 --------------------------ERNVVSWTSMIAGYTRDGRSDGAIKLLQQM-EKE 346
Query: 226 GIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAA 285
G++ S+L ACA SL GK++H A ++S+ FV AL++MY + + AA
Sbjct: 347 GVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAA 406
Query: 286 QMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSL 345
F + ++ +WN M +L PD T+ +L AC+SL
Sbjct: 407 NSVFSTM--------------VVKDIISWNTM-------IGELKPDSRTMACVLPACASL 445
Query: 346 ATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAML 405
+ +ERGK++H Y +R GY SD H+ ALVD+Y KCG L ARL + I + DLVS M+
Sbjct: 446 SALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMI 505
Query: 406 TAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDV 464
Y MHG+G E IA F + +G PD +SF+S L AC H+G ++ G FF +M +++
Sbjct: 506 AGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNI 565
Query: 465 KPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAAD 524
+P L+HY CMVDLLSR G L +AYEFI+ +P+APD+ +WGALL GC ++ ++E + A+
Sbjct: 566 EPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGCRNYHDIELAEKVAE 625
Query: 525 RLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKF- 583
R+ ELEP N+G YV+LAN++A A +W ++ R R+K+ + + K+PGCSWIE + +++ F
Sbjct: 626 RVFELEPENSGYYVLLANIYAEAEKWEEVKRLREKIGKQGLRKNPGCSWIEIKGKVNLFV 685
Query: 584 RASDRSHDRSEEIYTII 600
++ SH S+ I +++
Sbjct: 686 SGNNSSHPHSKNIESLL 702
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 131/485 (27%), Positives = 213/485 (43%), Gaps = 43/485 (8%)
Query: 48 RMSSLDNETPN--LVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACA 105
R+S+ T + + ++A I F Q G E A+ ++ + LE +T SSVL CA
Sbjct: 53 RISATPTRTIDHQVTDYNAKILHFCQLGDLENAMELICMCKKSELE--TKTYSSVLQLCA 110
Query: 106 RLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNT 165
L+ + GK+ H I N + + LV Y CGD+ ++F KN N
Sbjct: 111 GLKSFTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNF 170
Query: 166 IIVGYCENGNVAEARELFDQMEHLGVQ----------------RGIISWNSMISGYVDNS 209
++ Y + G+ E+ LF M G++ R +ISWNSMISGYV N
Sbjct: 171 MVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNG 230
Query: 210 LYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVG 269
L + +++ +M GI+ T SVL+ CA+ +L GK +H+LAI +
Sbjct: 231 LTERGLGIYKQ-MMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFS 289
Query: 270 GALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLT 329
L++MY + DL A F+++ + G+ + + A++L +M +
Sbjct: 290 NTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVK 349
Query: 330 PDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLA 389
D+ + IL AC+ +++ GK VH Y +S++ + AL+DMYAKCGS++ A
Sbjct: 350 LDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSV 409
Query: 390 YKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSI 449
+ + D++S N M+ +PD + L AC ++
Sbjct: 410 FSTMVVKDIISWNTMIGE---------------------LKPDSRTMACVLPACASLSAL 448
Query: 450 KTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
+ G E + +VDL + G LG A IP + D V W ++ G
Sbjct: 449 ERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIP-SKDLVSWTVMIAG 507
Query: 510 CVSHG 514
HG
Sbjct: 508 YGMHG 512
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 99/341 (29%), Positives = 155/341 (45%), Gaps = 49/341 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMS---------- 50
MY KCG LD A +VF+ M ER+ VSW S++ +G A++ L++M
Sbjct: 295 MYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVA 354
Query: 51 ------------SLDNET------------PNLVSWSAVIGGFTQNGYDEEAIGMLFRMQ 86
SLDN NL +A++ + + G E A + M
Sbjct: 355 ITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMV 414
Query: 87 AEG----------LEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLV 136
+ L+P++RT++ VLPACA L L GKE HGYI RNG+ S+ V N LV
Sbjct: 415 VKDIISWNTMIGELKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALV 474
Query: 137 DVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGII 196
D+Y +CG + A +F K+ VS +I GY +G EA F++M G++ +
Sbjct: 475 DLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEV 534
Query: 197 SWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKE-IHA 255
S+ S++ + L ++ + F + IEP + ++ + +L K E I
Sbjct: 535 SFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIET 594
Query: 256 LAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
L IA D + GAL+ Y D+ A+ + + +E
Sbjct: 595 LPIA----PDATIWGALLCGCRNYHDIELAEKVAERVFELE 631
>gi|357138408|ref|XP_003570784.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Brachypodium distachyon]
Length = 750
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 224/603 (37%), Positives = 353/603 (58%), Gaps = 21/603 (3%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERM-SSLDNETPNLV 60
Y G L A++VF MP R+ V+ NS+++A A GLV + +ER+ +SL + V
Sbjct: 56 YASSGLLPHARRVFDAMPGRNLVTGNSLLSALARAGLVRD----MERLFTSLPQR--DAV 109
Query: 61 SWSAVIGGFTQNGYDEEAIGM---LFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
S++A++ GF++ G A G L R +A G+ P+ T+S V+ + L +LG++ H
Sbjct: 110 SYNALLAGFSRAGAHARAAGAYVALLRDEA-GVRPSRITMSGVVMVASALGDRALGRQVH 168
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
I R GF + F + LVD+Y + G + A ++F + KN V CNT+I G VA
Sbjct: 169 CQILRLGFGAYAFTGSPLVDMYAKVGPIGDARRVFDEMEGKNVVMCNTMITGLLRCKMVA 228
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
EAR LF+ +E +R I+W +M++G N L EA +FR + +G+ +TFGS+
Sbjct: 229 EARALFEAIE----ERDSITWTTMVTGLTQNGLESEALDVFRRM-RAEGVGIDQYTFGSI 283
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI--ENI 295
L AC + +L +GK+IHA + + FVG ALV+MY + + + A+ F + +NI
Sbjct: 284 LTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVRLAEAVFRRMMWKNI 343
Query: 296 ENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVH 355
+ + G+ N A+++FSEM + PD +T+G ++S+C++LA++E G Q H
Sbjct: 344 ISWTAMIV--GYGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSCANLASLEEGAQFH 401
Query: 356 AYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGK 415
A+ G V + ALV +Y KCGS++ A + +S D VS A++ YA G K
Sbjct: 402 CLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVMGYAQFGKAK 461
Query: 416 EGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCM 474
E I F ++L+ G +PD ++F+ LSAC +G + G +F M +D+ P HYTCM
Sbjct: 462 ETIDLFEKMLSKGVKPDGVTFIGVLSACSRSGLVDKGRSYFHSMQQDHDIVPLDDHYTCM 521
Query: 475 VDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNT 534
+DL SR+G L +A EFIK++P PD+ W LL C G++E G+ AA+ L++L+P N
Sbjct: 522 IDLYSRSGWLKQAEEFIKQMPRCPDAFGWATLLSACRLRGDMEIGKWAAENLLKLDPQNP 581
Query: 535 GNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSE 594
+YV+L ++ A G W+D+A+ R+ M+DR++ K PGCSWI+ ++++H F A D+SH S
Sbjct: 582 ASYVLLCSMHASKGEWNDVAKLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSR 641
Query: 595 EIY 597
IY
Sbjct: 642 TIY 644
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 127/416 (30%), Positives = 204/416 (49%), Gaps = 47/416 (11%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G + DA++VF M ++ V N+++T +V EA E + D+ +
Sbjct: 189 MYAKVGPIGDARRVFDEMEGKNVVMCNTMITGLLRCKMVAEARALFEAIEERDS-----I 243
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+ ++ G TQNG + EA+ + RM+AEG+ + T S+L AC L L GK+ H YI
Sbjct: 244 TWTTMVTGLTQNGLESEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYI 303
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
TR + N FV + LVD+Y +C + A +F + KN +S +IVGY +NG EA
Sbjct: 304 TRTCYEDNVFVGSALVDMYSKCRSVRLAEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAV 363
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+F +M+ RDGI+P FT GSV+ +
Sbjct: 364 RVFSEMQ------------------------------------RDGIKPDDFTLGSVISS 387
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA++ SL +G + H LA+ GL+ V ALV +Y + + A FDE+ + +
Sbjct: 388 CANLASLEEGAQFHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSW 447
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G+ + LF +MLS + PD T +LSACS +++G+ + ++++
Sbjct: 448 TALVMGYAQFGKAKETIDLFEKMLSKGVKPDGVTFIGVLSACSRSGLVDKGRS-YFHSMQ 506
Query: 361 CGYDS---DVHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNAMLTAYAMHG 412
+D D H T ++D+Y++ G LK A K++ PD +L+A + G
Sbjct: 507 QDHDIVPLDDHY-TCMIDLYSRSGWLKQAEEFIKQMPRCPDAFGWATLLSACRLRG 561
>gi|188509980|gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
Length = 805
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 211/617 (34%), Positives = 337/617 (54%), Gaps = 76/617 (12%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERM---SSLDNETP- 57
Y CG L + ++VF M +++ WN +V+ A G E++ CL ++ ++ + P
Sbjct: 144 YATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESI-CLFKIMVEKGIEGKRPE 202
Query: 58 ------------NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACA 105
+++SW+++I G+ NG E +G+ +M G++ + T+ SVL CA
Sbjct: 203 SAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCA 262
Query: 106 RLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNT 165
LSLGK H ++ F N L+D+Y +CGD+ AL++F K
Sbjct: 263 NSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMG--------- 313
Query: 166 IIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRD 225
+R ++SW SMI+GY + D A + + + ++
Sbjct: 314 --------------------------ERNVVSWTSMIAGYTRDGRSDGAIKLLQQM-EKE 346
Query: 226 GIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAA 285
G++ S+L ACA SL GK++H A ++S+ FV AL++MY + + AA
Sbjct: 347 GVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAA 406
Query: 286 QMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSL 345
F + ++ +WN M +L PD T+ +L AC+SL
Sbjct: 407 NSVFSTM--------------VVKDIISWNTM-------IGELKPDSRTMACVLPACASL 445
Query: 346 ATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAML 405
+ +ERGK++H Y +R GY SD H+ ALVD+Y KCG L ARL + I + DLVS M+
Sbjct: 446 SALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMI 505
Query: 406 TAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDV 464
Y MHG+G E IA F + +G PD +SF+S L AC H+G ++ G FF +M +++
Sbjct: 506 AGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNI 565
Query: 465 KPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAAD 524
+P L+HY CMVDLLSR G L +AYEF++ +P+APD+ +WGALL GC ++ ++E + A+
Sbjct: 566 EPKLEHYACMVDLLSRTGNLSKAYEFMETLPIAPDATIWGALLCGCRNYHDIELAEKVAE 625
Query: 525 RLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKF- 583
R+ ELEP NTG YV+LAN++A A +W ++ R R+K+ + + K+PGCSWIE + +++ F
Sbjct: 626 RVFELEPENTGYYVLLANIYAEAEKWEEVKRLREKIGKQGLRKNPGCSWIEIKGKVNLFV 685
Query: 584 RASDRSHDRSEEIYTII 600
++ SH S+ I +++
Sbjct: 686 SGNNSSHPHSKNIESLL 702
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 131/485 (27%), Positives = 212/485 (43%), Gaps = 43/485 (8%)
Query: 48 RMSSLDNETPN--LVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACA 105
R+S+ T + + ++A I F Q G E A+ ++ Q LE +T SVL CA
Sbjct: 53 RISATPTRTIDHQVTDYNAKILHFCQLGDLENAMELICMCQKSELE--TKTYGSVLQLCA 110
Query: 106 RLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNT 165
L+ + GK+ H I N + + LV Y CGD+ ++F KN N
Sbjct: 111 GLKSFTDGKKVHSIIKSNSVGVDGALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNF 170
Query: 166 IIVGYCENGNVAEARELFDQMEHLGVQ----------------RGIISWNSMISGYVDNS 209
++ Y + G+ E+ LF M G++ R +ISWNSMISGYV N
Sbjct: 171 MVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNG 230
Query: 210 LYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVG 269
L + +++ +M GI+ T SVL+ CA+ +L GK +H+LAI +
Sbjct: 231 LTERGLGIYKQ-MMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFS 289
Query: 270 GALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLT 329
L++MY + DL A F+++ + G+ + + A++L +M +
Sbjct: 290 NTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVK 349
Query: 330 PDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLA 389
D+ + IL AC+ +++ GK VH Y +S++ + AL+DMYAKCGS++ A
Sbjct: 350 LDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSV 409
Query: 390 YKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSI 449
+ + D++S N M+ +PD + L AC ++
Sbjct: 410 FSTMVVKDIISWNTMIGE---------------------LKPDSRTMACVLPACASLSAL 448
Query: 450 KTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
+ G E + +VDL + G LG A IP + D V W ++ G
Sbjct: 449 ERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIP-SKDLVSWTVMIAG 507
Query: 510 CVSHG 514
HG
Sbjct: 508 YGMHG 512
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/340 (28%), Positives = 153/340 (45%), Gaps = 47/340 (13%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMS---------- 50
MY KCG LD A +VF+ M ER+ VSW S++ +G A++ L++M
Sbjct: 295 MYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVA 354
Query: 51 ------------SLDNET------------PNLVSWSAVIGGFTQNGYDEEAIGMLFRMQ 86
SLDN NL +A++ + + G E A + M
Sbjct: 355 ITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMV 414
Query: 87 AEG----------LEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLV 136
+ L+P++RT++ VLPACA L L GKE HGYI RNG+ S+ V N LV
Sbjct: 415 VKDIISWNTMIGELKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALV 474
Query: 137 DVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGII 196
D+Y +CG + A +F K+ VS +I GY +G EA F++M G++ +
Sbjct: 475 DLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEV 534
Query: 197 SWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHAL 256
S+ S++ + L ++ + F + IEP + ++ + +L K E
Sbjct: 535 SFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFME- 593
Query: 257 AIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
L + D + GAL+ Y D+ A+ + + +E
Sbjct: 594 --TLPIAPDATIWGALLCGCRNYHDIELAEKVAERVFELE 631
>gi|449462814|ref|XP_004149135.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
gi|449523485|ref|XP_004168754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 687
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 213/640 (33%), Positives = 351/640 (54%), Gaps = 82/640 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+YGKCG +D A+K+F M ER+ SWNS++ A +G + +A+ E+M +D
Sbjct: 63 VYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQ-----C 117
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+++I GF Q+G +EA+ +M G N + S L ACA LQ L LG + H +
Sbjct: 118 SWNSMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLV 177
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R+ ++S+ ++ + LVD+Y +CG V A+
Sbjct: 178 YRSNYLSDVYMGSALVDMYSKCG-------------------------------RVEYAQ 206
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+FD+M R +SWNS+I+ Y N DEA +F +++ + G+EP T SV+ A
Sbjct: 207 SVFDEM----TVRSRVSWNSLITCYEQNGPVDEALKIFVEMI-KCGVEPDEVTLASVVSA 261
Query: 241 CADMNSLRKGKEIHALAIALG-LQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
CA ++++++G++IHA + ++D +G AL++MY + + A++ FD + I +++
Sbjct: 262 CATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMP-IRSVV 320
Query: 300 GK------------------MKEDGFEPNVYTWNAMQ--------------LFSEMLSLD 327
+ M + +V TWNA+ LF +
Sbjct: 321 SETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRES 380
Query: 328 LTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGY------DSDVHIGTALVDMYAKCG 381
+ P YT G +L+AC++LA ++ G+Q H++ ++ G+ DSDV +G +L+DMY KCG
Sbjct: 381 VWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGNSLIDMYMKCG 440
Query: 382 SLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALS 441
S+++ ++ + D VS NAM+ YA +G G + + F ++L SG PDH++ + L
Sbjct: 441 SVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVFCKMLESGEAPDHVTMIGVLC 500
Query: 442 ACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDS 500
AC HAG + G +F M A + + P HYTCMVDLL RAG L EA I+++ M PD+
Sbjct: 501 ACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGRAGYLEEAKNLIEEMSMQPDA 560
Query: 501 VMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKM 560
++WG+LL C H N++ G+ +L+E++P N+G YV+L+N++A W ++ R R+ M
Sbjct: 561 IVWGSLLAACKVHRNIQLGEYVVKKLLEVDPENSGPYVLLSNMYAENRDWKNVVRVRKLM 620
Query: 561 KDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTII 600
+ R + K PGCSWIE + E++ F D+ H R +EIY ++
Sbjct: 621 RQRGVVKQPGCSWIEIQGELNVFMVKDKRHARKKEIYMVL 660
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 117/394 (29%), Positives = 205/394 (52%), Gaps = 12/394 (3%)
Query: 80 GMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVY 139
G++ ++ + L ++ S +L CAR + H I ++ F S F+ N L+DVY
Sbjct: 5 GLVKHLKGDLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVY 64
Query: 140 RRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWN 199
+CG + A K+F + +N S N+II + ++G + +A +F++M Q SWN
Sbjct: 65 GKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMP----QVDQCSWN 120
Query: 200 SMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIA 259
SMISG+ + +DEA F + G ++FGS L ACA + L+ G +IH+L
Sbjct: 121 SMISGFEQHGRFDEALVYFAQ-MHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYR 179
Query: 260 LGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQL 319
SD ++G ALV+MY + + AQ FDE+ + +E N A+++
Sbjct: 180 SNYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKI 239
Query: 320 FSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCG-YDSDVHIGTALVDMYA 378
F EM+ + PD T+ ++SAC++++ ++ G+Q+HA ++C + +D+ +G AL+DMYA
Sbjct: 240 FVEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYA 299
Query: 379 KCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLS 438
KC + AR+ + + +VS+ +M++ YA K R + ++ D I++ +
Sbjct: 300 KCNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVA----RYMFSNMMVKDVITWNA 355
Query: 439 ALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYT 472
++ C G + F L+ V P+ HYT
Sbjct: 356 LIAGCTQNGENEEALILFRLLKRESVWPT--HYT 387
>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930 [Vitis vinifera]
gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
Length = 743
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 212/600 (35%), Positives = 343/600 (57%), Gaps = 16/600 (2%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETP--NL 59
Y K G+L A VF +P+ + SWN++++ + GL L +M + N P +
Sbjct: 50 YYKLGNLAYAHHVFDHIPQPNLFSWNTILSVYSKLGL-------LSQMQQIFNLMPFRDG 102
Query: 60 VSWSAVIGGFTQNGYDEEAIGML-FRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHG 118
VSW+ I G+ G +A+ + ++ + N T S++L C++ + + LG++ +G
Sbjct: 103 VSWNLAISGYANYGSCSDAVRVYKLMLKDAAMNLNRITFSTMLILCSKFRCVDLGRQING 162
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
I + GF S+ FV + LVD+Y + G + A + F + +N V CNT+I G G + E
Sbjct: 163 QILKFGFGSDVFVGSPLVDMYTKLGLIYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEE 222
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
++ LF ++ +R ISW MI+G + N L EA MFR++ + G FTFGSVL
Sbjct: 223 SQRLFCGLK----ERDSISWTIMITGLMQNGLEREALDMFREMRLA-GFAMDQFTFGSVL 277
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
AC + +L +GK+IHA I + + FVG ALV+MY + + + +A+ F + +
Sbjct: 278 TACGSLLALGEGKQIHAYVIRTDHKDNVFVGSALVDMYSKCRSIKSAETVFKRMPQKNVI 337
Query: 299 LGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYA 358
G+ N ++ A+++F EM + PD +T+G ++S+C++LA++E G Q H A
Sbjct: 338 SWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEPDDFTLGSVISSCANLASLEEGAQFHCRA 397
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGI 418
+ G S + + AL+ +Y KCGS +++ + ++ D VS A+L YA G E I
Sbjct: 398 LVSGLISFITVSNALITLYGKCGSTENSHRLFTEMNIRDEVSWTALLAGYAQFGKANETI 457
Query: 419 AHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFD-LMAYYDVKPSLKHYTCMVDL 477
F R+LA G +PD ++F+ LSAC AG ++ G ++F+ ++ + + P + H TC++DL
Sbjct: 458 GLFERMLAHGLKPDGVTFIGVLSACSRAGLVEKGLQYFESMIKEHGIMPIVDHCTCIIDL 517
Query: 478 LSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNY 537
L RAG L EA FI +P PD V W LL C HG++E G+ AAD LI LEP N +Y
Sbjct: 518 LGRAGRLEEARNFINNMPCHPDVVGWATLLSSCRVHGDMEIGKWAADSLIALEPQNPASY 577
Query: 538 VMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
V+L++L+A G+W +A+ R+ M+D+R+ K PG SWI+ + ++H F A D+S +IY
Sbjct: 578 VLLSSLYASKGKWDKVAQLRRGMRDKRVRKEPGYSWIKYKGKVHVFSADDQSSPFLGQIY 637
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 112/229 (48%), Gaps = 36/229 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC S+ A+ VFK MP+++ +SW +++
Sbjct: 314 MYSKCRSIKSAETVFKRMPQKNVISWTAMLV----------------------------- 344
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
G+ QNG+ EEA+ + F MQ G+EP+ TL SV+ +CA L L G +FH
Sbjct: 345 -------GYGQNGFSEEAVKIFFEMQRNGVEPDDFTLGSVISSCANLASLEEGAQFHCRA 397
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+G +S V N L+ +Y +CG ++ ++F++ +I++EVS ++ GY + G E
Sbjct: 398 LVSGLISFITVSNALITLYGKCGSTENSHRLFTEMNIRDEVSWTALLAGYAQFGKANETI 457
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEP 229
LF++M G++ +++ ++S L ++ F ++ GI P
Sbjct: 458 GLFERMLAHGLKPDGVTFIGVLSACSRAGLVEKGLQYFESMIKEHGIMP 506
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/383 (20%), Positives = 150/383 (39%), Gaps = 95/383 (24%)
Query: 227 IEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQ 286
+ +S + S+L C + + + K++H L + Q +TF+ L+ Y + +L A
Sbjct: 1 MSSSSNYYASLLKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAH 60
Query: 287 MAFDEIENIENLLGKMKEDGFEPNVYTWNAM--------------QLFSEM-----LSLD 327
FD I +PN+++WN + Q+F+ M +S +
Sbjct: 61 HVFDHIP--------------QPNLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWN 106
Query: 328 LTPDIY---------------------------TVGIILSACSSLATMERGKQVHAYAIR 360
L Y T +L CS ++ G+Q++ ++
Sbjct: 107 LAISGYANYGSCSDAVRVYKLMLKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILK 166
Query: 361 CGYDSDVHIGTALVDMYAK-------------------------------CGSLKHARLA 389
G+ SDV +G+ LVDMY K CG ++ ++
Sbjct: 167 FGFGSDVFVGSPLVDMYTKLGLIYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRL 226
Query: 390 YKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSI 449
+ + D +S M+T +G +E + FR + +GF D +F S L+AC ++
Sbjct: 227 FCGLKERDSISWTIMITGLMQNGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLAL 286
Query: 450 KTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
G + + D K ++ + +VD+ S+ + A K++P + + W A+L
Sbjct: 287 GEGKQIHAYVIRTDHKDNVFVGSALVDMYSKCRSIKSAETVFKRMPQK-NVISWTAML-- 343
Query: 510 CVSHGNLEFGQIAADRLIELEPN 532
V +G F + A E++ N
Sbjct: 344 -VGYGQNGFSEEAVKIFFEMQRN 365
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 69/171 (40%), Gaps = 43/171 (25%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+YGKCGS +++ ++F M RD VSW +++
Sbjct: 415 LYGKCGSTENSHRLFTEMNIRDEVSWTALL------------------------------ 444
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKE-FHGY 119
G+ Q G E IG+ RM A GL+P+ T VL AC+R + G + F
Sbjct: 445 ------AGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSACSRAGLVEKGLQYFESM 498
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGY 170
I +G M ++D+ R G + A N + C+ +VG+
Sbjct: 499 IKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFI------NNMPCHPDVVGW 543
>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
Length = 890
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 217/633 (34%), Positives = 337/633 (53%), Gaps = 75/633 (11%)
Query: 1 MYGKCGSLDDAKKVFKMMPER---DCVSWNSVVTACAANGLVLEALECLERMSSLDNETP 57
MY +CGSL++A +F + +R D +SWNS+V+A + AL+ +M+ + +E P
Sbjct: 199 MYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKP 258
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
+E + + ++ ++LPAC L+ + KE H
Sbjct: 259 T----------------NERS--------------DIISIVNILPACGSLKAVPQTKEVH 288
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
G RNG + FV N L+D Y +CG M +A+K+F+ K+ VS N ++ GY ++GN
Sbjct: 289 GNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFE 348
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
A ELF M + +++W ++I+GY EA ++FR ++ G P T SV
Sbjct: 349 AAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIF-SGSLPNCVTIISV 407
Query: 238 LIACADMNSLRKGKEIHALAIAL----------GLQSDTFVGGALVEMYCRYQDLVAAQM 287
L ACA + + +G EIHA ++ G D V AL++MY + + AA+
Sbjct: 408 LSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARS 467
Query: 288 AFDEIENIENLLGKMKEDGFEPNVYTW--------------NAMQLFSEMLS--LDLTPD 331
FD+I +E E NV TW +A++LF EM+S + P+
Sbjct: 468 IFDDIP-LE-----------ERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPN 515
Query: 332 IYTVGIILSACSSLATMERGKQVHAYAIRCG-YDSDVH-IGTALVDMYAKCGSLKHARLA 389
YT+ IL AC+ LA + GKQ+HAY +R Y+S + + L+DMY+KCG + AR
Sbjct: 516 AYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHV 575
Query: 390 YKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSI 449
+ +S +S +M+T Y MHG G E + F ++ +GF PD I+FL L AC H G +
Sbjct: 576 FDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMV 635
Query: 450 KTGSEFFDLM-AYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLG 508
G +FD M A Y + P +HY C +DLL+R+G L +A+ +K +PM P +V+W ALL
Sbjct: 636 DQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLS 695
Query: 509 GCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKS 568
C H N+E + A ++L+E+ N G+Y +++N++A AGRW D+AR R MK + K
Sbjct: 696 ACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKR 755
Query: 569 PGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
PGCSW++ + F DRSH S +IY +++
Sbjct: 756 PGCSWVQGQKGTASFFVGDRSHPLSPQIYALLE 788
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 141/541 (26%), Positives = 238/541 (43%), Gaps = 92/541 (17%)
Query: 29 VVTACAANGLVLEALECLERMSSLDNETPN-LVSWSAVIGGFTQNGYDEEAIGMLFRMQA 87
VV + A G AL LER+ TP+ V W+ +I + G + AI + RM
Sbjct: 95 VVASYLACGATDYALLVLERV------TPSPAVWWNLLIREHIKQGRLDSAINVSCRMLR 148
Query: 88 EGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLS 147
G P+ TL VL AC L G FHG I NGF SN F+ N LV +Y RCG +
Sbjct: 149 AGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEE 208
Query: 148 ALKIFSKFS---IKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISG 204
A IF + + I + +S N+I+ + ++ N A +LF +M + ++ + +IS
Sbjct: 209 ASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIIS- 267
Query: 205 YVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQS 264
++L AC + ++ + KE+H AI G
Sbjct: 268 -----------------------------IVNILPACGSLKAVPQTKEVHGNAIRNGTFP 298
Query: 265 DTFVGGALVEMYCR---------------YQDLV---AAQMAFDEIENIE---NLLGKMK 303
D FVG AL++ Y + ++D+V A + + N E L M+
Sbjct: 299 DVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMR 358
Query: 304 EDGFEPNVYTWN--------------AMQLFSEMLSLDLTPDIYTVGIILSACSSLATME 349
++ +V TW A+ LF +M+ P+ T+ +LSAC+SL
Sbjct: 359 KENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFS 418
Query: 350 RGKQVHAYAIR-C---------GYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPD-- 397
+G ++HAY+++ C G D D+ + AL+DMY+KC S K AR + I +
Sbjct: 419 QGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERN 478
Query: 398 LVSQNAMLTAYAMHGHGKEGIAHFRRILAS--GFRPDHISFLSALSACVHAGSIKTGSEF 455
+V+ M+ +A +G + + F +++ G P+ + L AC H +I+ G +
Sbjct: 479 VVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQI 538
Query: 456 FDLMAYYDVKPSLKHYT--CMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSH 513
+ + S ++ C++D+ S+ G++ A + ++ W +++ G H
Sbjct: 539 HAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQK-SAISWTSMMTGYGMH 597
Query: 514 G 514
G
Sbjct: 598 G 598
>gi|297844988|ref|XP_002890375.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336217|gb|EFH66634.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 760
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 200/581 (34%), Positives = 319/581 (54%), Gaps = 37/581 (6%)
Query: 57 PNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEF 116
P + S+S++I T+ ++IG+ RM + GL P+ L ++ CA L GK+
Sbjct: 79 PTVYSFSSLIYALTKAKLFSQSIGVFSRMFSHGLIPDTHVLPNLFKVCAELSAFKAGKQI 138
Query: 117 HGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNV 176
H +G + FV L +Y RCG M A K+F + S K+ V+C+ ++ GY G +
Sbjct: 139 HCVACVSGLDMDAFVQGSLFHMYMRCGRMGDARKVFDRMSEKDVVTCSALLCGYARKGCL 198
Query: 177 AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGS 236
E + +ME G++ I+SWN ++SG+ + + EA MF+ + G P T S
Sbjct: 199 EEVVRILSEMEKSGIEPNIVSWNGILSGFNRSGYHKEAVIMFQKM-HHLGFCPDQVTVSS 257
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
VL + D +L G++IH I GL D V A+++MY + + FDE E +E
Sbjct: 258 VLPSVGDSENLNMGRQIHGYVIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEMME 317
Query: 297 N---------------------LLGKMKEDGFEPNVYTWN--------------AMQLFS 321
+ G KE E NV +W A++LF
Sbjct: 318 TGVCNAYITGLSRNGLVDKALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFR 377
Query: 322 EMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCG 381
EM + P+ T+ +L AC ++A + G+ H +A+R DVH+G+AL+DMYAKCG
Sbjct: 378 EMQVAGVKPNRVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDDVHVGSALIDMYAKCG 437
Query: 382 SLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALS 441
+K +++ + + T +LV N+++ Y+MHG KE ++ F ++ + +PD ISF S LS
Sbjct: 438 RIKMSQIVFNMMPTKNLVCWNSLMNGYSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLS 497
Query: 442 ACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDS 500
AC G G ++F++M+ Y +KP L+HY+CMV+LL RAG+L EAY+ IK+IP PDS
Sbjct: 498 ACGQVGLTDEGWKYFNMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEIPFEPDS 557
Query: 501 VMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKM 560
+WGALL C N++ +IAA +L LEP N G YV+++N++A G W+++ R KM
Sbjct: 558 CVWGALLNSCRLQNNVDLAEIAAQKLFHLEPENPGTYVLMSNIYAAKGMWTEVDSIRNKM 617
Query: 561 KDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
+ + K+PGCSWI+ +++++ A D+SH + ++I +D
Sbjct: 618 ESLGLKKNPGCSWIQVKNKVYTLLACDKSHPQIDQITEKMD 658
Score = 208 bits (529), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 117/409 (28%), Positives = 212/409 (51%), Gaps = 4/409 (0%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +CG + DA+KVF M E+D V+ ++++ A G + E + L M E PN+V
Sbjct: 160 MYMRCGRMGDARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKSGIE-PNIV 218
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ ++ GF ++GY +EA+ M +M G P+ T+SSVLP+ + L++G++ HGY+
Sbjct: 219 SWNGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQVTVSSVLPSVGDSENLNMGRQIHGYV 278
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G + + V++ ++D+Y + G + +K+F +F + CN I G NG V +A
Sbjct: 279 IKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEMMETGVCNAYITGLSRNGLVDKAL 338
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
E+F + ++ ++SW S+I+G N EA +FR++ + G++P T S+L A
Sbjct: 339 EMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFREMQVA-GVKPNRVTIPSMLPA 397
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C ++ +L G+ H A+ + L D VG AL++MY + + +Q+ F+ + +
Sbjct: 398 CGNIAALGHGRSTHGFAVRVHLLDDVHVGSALIDMYAKCGRIKMSQIVFNMMPTKNLVCW 457
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG-KQVHAYAI 359
+G+ + M +F ++ L PD + +LSAC + + G K + +
Sbjct: 458 NSLMNGYSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFNMMSE 517
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNAMLTA 407
G + + +V++ + G L+ A K I PD A+L +
Sbjct: 518 EYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEIPFEPDSCVWGALLNS 566
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 98/232 (42%), Gaps = 28/232 (12%)
Query: 249 KGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFE 308
K + HA + G Q+D ++ L+ Y Y A + I +
Sbjct: 33 KTTQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLILQSIP--------------D 78
Query: 309 PNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV 354
P VY+++++ +FS M S L PD + + + C+ L+ + GKQ+
Sbjct: 79 PTVYSFSSLIYALTKAKLFSQSIGVFSRMFSHGLIPDTHVLPNLFKVCAELSAFKAGKQI 138
Query: 355 HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHG 414
H A G D D + +L MY +CG + AR + R+S D+V+ +A+L YA G
Sbjct: 139 HCVACVSGLDMDAFVQGSLFHMYMRCGRMGDARKVFDRMSEKDVVTCSALLCGYARKGCL 198
Query: 415 KEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKP 466
+E + + SG P+ +S+ LS +G K F M + P
Sbjct: 199 EEVVRILSEMEKSGIEPNIVSWNGILSGFNRSGYHKEAVIMFQKMHHLGFCP 250
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 89/197 (45%), Gaps = 8/197 (4%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG + ++ VF MMP ++ V WNS++ + +G E + E + P+ +
Sbjct: 432 MYAKCGRIKMSQIVFNMMPTKNLVCWNSLMNGYSMHGKAKEVMSIFESLMR-TRLKPDFI 490
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
S+++++ Q G +E M E G++P S ++ R KL +E +
Sbjct: 491 SFTSLLSACGQVGLTDEGWKYFNMMSEEYGIKPRLEHYSCMVNLLGRAGKL---QEAYDL 547
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDM-LSALKIFSKFSIKNEVSCNTIIVG--YCENGNV 176
I F + V L++ R ++ L+ + F ++ E +++ Y G
Sbjct: 548 IKEIPFEPDSCVWGALLNSCRLQNNVDLAEIAAQKLFHLEPENPGTYVLMSNIYAAKGMW 607
Query: 177 AEARELFDQMEHLGVQR 193
E + ++ME LG+++
Sbjct: 608 TEVDSIRNKMESLGLKK 624
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 70/176 (39%), Gaps = 17/176 (9%)
Query: 350 RGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYA 409
+ Q HA ++ G +D +I L+ Y+ A L + I P + S ++++ A
Sbjct: 33 KTTQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLILQSIPDPTVYSFSSLIYALT 92
Query: 410 MHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEF--------FDLMAY 461
+ I F R+ + G PD + C + K G + D+ A+
Sbjct: 93 KAKLFSQSIGVFSRMFSHGLIPDTHVLPNLFKVCAELSAFKAGKQIHCVACVSGLDMDAF 152
Query: 462 YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
V+ SL H + R G +G+A + ++ D V ALL G G LE
Sbjct: 153 --VQGSLFH------MYMRCGRMGDARKVFDRMS-EKDVVTCSALLCGYARKGCLE 199
>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
Length = 747
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 211/640 (32%), Positives = 338/640 (52%), Gaps = 52/640 (8%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y K G DA +F MP + SWN++++ A G + +A + + + D+ V
Sbjct: 19 LYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKAHQVFDLIPVRDS-----V 73
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ +I G+ Q G E+AI + M + + P TL++VL +CA +GK+ H ++
Sbjct: 74 SWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAATGSRGIGKKVHSFV 133
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G + V N L+++Y + GD+ A +F + ++N S N +I + G V A
Sbjct: 134 VKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMISLHMNCGRVDLAL 193
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
F+ + +R I+SWNSMI+G + +EA F +L ++P F+ S L A
Sbjct: 194 AQFELLS----ERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFSLASALSA 249
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCR---------------------- 278
CA++ L GK+IH + + VG AL+ MY +
Sbjct: 250 CANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQSGISDLDVI 309
Query: 279 -YQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAM--------------QLFSEM 323
+ L+ + +I + +K+ P+V W AM ++F M
Sbjct: 310 AFTALLNGYVKLGDITPARQIFNSLKD----PDVVAWTAMIVGYVQNGLNNDAIEVFKTM 365
Query: 324 LSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSL 383
+S P+ +T+ +LSA SS+ ++ GKQ+HA AIR G +G AL MYAK GS+
Sbjct: 366 VSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTMYAKAGSI 425
Query: 384 KHARLAYKRI-STPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSA 442
AR + + D VS +M+ A A HG G+E I F ++L G +PDHI+++ LSA
Sbjct: 426 NGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYVGVLSA 485
Query: 443 CVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSV 501
C H G ++ G +FDLM + + P+L HY CMVDL RAG L EAY+F++ +PM PD +
Sbjct: 486 CTHGGLVEQGRSYFDLMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVENMPMEPDVI 545
Query: 502 MWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMK 561
WG+LL C + N++ ++AA+RL+ +EPNN+G Y LAN+++ G+W D A+ R+ MK
Sbjct: 546 AWGSLLSSCKVYKNVDLAKVAAERLLLIEPNNSGAYSALANVYSSCGKWDDAAKIRKLMK 605
Query: 562 DRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
R + K G SW++ +++ H F D H + +EIY ++D
Sbjct: 606 ARGVKKEQGLSWVQIQNKTHVFGVEDGLHPQKDEIYKMMD 645
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 117/468 (25%), Positives = 215/468 (45%), Gaps = 94/468 (20%)
Query: 124 GFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELF 183
G + +++N L+++Y + G L A +F++ +K S NTI+ GY + G + +A ++F
Sbjct: 5 GLTFSVYLMNNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKAHQVF 64
Query: 184 DQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACAD 243
D + R +SW ++I GY +++A +F D++ +D + PT FT +VL +CA
Sbjct: 65 DLIP----VRDSVSWTTIIVGYNQMGRFEDAIKIFVDMV-KDKVLPTQFTLTNVLASCAA 119
Query: 244 MNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE---------- 293
S GK++H+ + LGL + V +L+ MY + DL A++ FD ++
Sbjct: 120 TGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAM 179
Query: 294 --------NIENLLGKMKEDGFEPNVYTWNAM--------------QLFSEMLS-LDLTP 330
++ L + E E ++ +WN+M Q FS +L L P
Sbjct: 180 ISLHMNCGRVDLALAQF-ELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKP 238
Query: 331 DIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLK------ 384
D +++ LSAC++L + GKQ+H Y +R +D+ +G AL+ MYAK G ++
Sbjct: 239 DRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRII 298
Query: 385 ---------------------------HARLAYKRISTPDLVSQNAMLTAYAMHGHGKEG 417
AR + + PD+V+ AM+ Y +G +
Sbjct: 299 EQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDA 358
Query: 418 IAHFRRILASGFRPDHISFLSALSAC-----------VHAGSIKTGSEFFDLMAYYDVKP 466
I F+ +++ G RP+ + + LSA +HA +I++G + P
Sbjct: 359 IEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEA---------LSP 409
Query: 467 SLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
S+ + + + ++AG + A + + D+V W +++ HG
Sbjct: 410 SVGN--ALTTMYAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHG 455
>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
Length = 897
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 217/633 (34%), Positives = 337/633 (53%), Gaps = 75/633 (11%)
Query: 1 MYGKCGSLDDAKKVFKMMPER---DCVSWNSVVTACAANGLVLEALECLERMSSLDNETP 57
MY +CGSL++A +F + +R D +SWNS+V+A + AL+ +M+ + +E P
Sbjct: 206 MYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKP 265
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
+E + + ++ ++LPAC L+ + KE H
Sbjct: 266 T----------------NERS--------------DIISIVNILPACGSLKAVPQTKEVH 295
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
G RNG + FV N L+D Y +CG M +A+K+F+ K+ VS N ++ GY ++GN
Sbjct: 296 GNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFE 355
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
A ELF M + +++W ++I+GY EA ++FR ++ G P T SV
Sbjct: 356 AAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIF-SGSLPNCVTIISV 414
Query: 238 LIACADMNSLRKGKEIHALAIAL----------GLQSDTFVGGALVEMYCRYQDLVAAQM 287
L ACA + + +G EIHA ++ G D V AL++MY + + AA+
Sbjct: 415 LSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARS 474
Query: 288 AFDEIENIENLLGKMKEDGFEPNVYTW--------------NAMQLFSEMLS--LDLTPD 331
FD+I +E E NV TW +A++LF EM+S + P+
Sbjct: 475 IFDDIP-LE-----------ERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPN 522
Query: 332 IYTVGIILSACSSLATMERGKQVHAYAIRCG-YDSDVH-IGTALVDMYAKCGSLKHARLA 389
YT+ IL AC+ LA + GKQ+HAY +R Y+S + + L+DMY+KCG + AR
Sbjct: 523 AYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHV 582
Query: 390 YKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSI 449
+ +S +S +M+T Y MHG G E + F ++ +GF PD I+FL L AC H G +
Sbjct: 583 FDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMV 642
Query: 450 KTGSEFFDLM-AYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLG 508
G +FD M A Y + P +HY C +DLL+R+G L +A+ +K +PM P +V+W ALL
Sbjct: 643 DQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLS 702
Query: 509 GCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKS 568
C H N+E + A ++L+E+ N G+Y +++N++A AGRW D+AR R MK + K
Sbjct: 703 ACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKR 762
Query: 569 PGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
PGCSW++ + F DRSH S +IY +++
Sbjct: 763 PGCSWVQGQKGTASFFVGDRSHPLSPQIYALLE 795
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 141/541 (26%), Positives = 238/541 (43%), Gaps = 92/541 (17%)
Query: 29 VVTACAANGLVLEALECLERMSSLDNETPN-LVSWSAVIGGFTQNGYDEEAIGMLFRMQA 87
VV + A G AL LER+ TP+ V W+ +I + G + AI + RM
Sbjct: 102 VVASYLACGATDYALLVLERV------TPSPAVWWNLLIREHIKQGRLDSAINVSCRMLR 155
Query: 88 EGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLS 147
G P+ TL VL AC L G FHG I NGF SN F+ N LV +Y RCG +
Sbjct: 156 AGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEE 215
Query: 148 ALKIFSKFS---IKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISG 204
A IF + + I + +S N+I+ + ++ N A +LF +M + ++ + +IS
Sbjct: 216 ASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIIS- 274
Query: 205 YVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQS 264
++L AC + ++ + KE+H AI G
Sbjct: 275 -----------------------------IVNILPACGSLKAVPQTKEVHGNAIRNGTFP 305
Query: 265 DTFVGGALVEMYCR---------------YQDLV---AAQMAFDEIENIE---NLLGKMK 303
D FVG AL++ Y + ++D+V A + + N E L M+
Sbjct: 306 DVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMR 365
Query: 304 EDGFEPNVYTWN--------------AMQLFSEMLSLDLTPDIYTVGIILSACSSLATME 349
++ +V TW A+ LF +M+ P+ T+ +LSAC+SL
Sbjct: 366 KENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFS 425
Query: 350 RGKQVHAYAIR-C---------GYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPD-- 397
+G ++HAY+++ C G D D+ + AL+DMY+KC S K AR + I +
Sbjct: 426 QGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERN 485
Query: 398 LVSQNAMLTAYAMHGHGKEGIAHFRRILAS--GFRPDHISFLSALSACVHAGSIKTGSEF 455
+V+ M+ +A +G + + F +++ G P+ + L AC H +I+ G +
Sbjct: 486 VVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQI 545
Query: 456 FDLMAYYDVKPSLKHYT--CMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSH 513
+ + S ++ C++D+ S+ G++ A + ++ W +++ G H
Sbjct: 546 HAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQK-SAISWTSMMTGYGMH 604
Query: 514 G 514
G
Sbjct: 605 G 605
>gi|449438556|ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
gi|449479088|ref|XP_004155501.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
Length = 855
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 221/628 (35%), Positives = 334/628 (53%), Gaps = 74/628 (11%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYG+CG+LDDA ++F E LER + ++V
Sbjct: 171 MYGRCGALDDAHQMFD---------------------------EVLER------KIEDIV 197
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRM---QAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
SW++++ + Q G A+ + FRM + L P+A TL ++LPACA + L GK+ H
Sbjct: 198 SWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNILPACASVFALQHGKQVH 257
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
G+ RNG + + FV N LV +Y +C M A K+F K+ VS N ++ GY + G+
Sbjct: 258 GFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGYSQIGSFD 317
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
A LF M+ ++ +I+W+++I+GY EA +FR + + G+EP T S+
Sbjct: 318 SALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQMQLY-GLEPNVVTLASL 376
Query: 238 LIACADMNSLRKGKEIHALAIA--LGL-----QSDTFVGGALVEMYCRYQDLVAAQMAFD 290
L CA + +L GK+ HA I L L + D V L++MY + + A+ FD
Sbjct: 377 LSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVARSIFD 436
Query: 291 EIENIENLLGKMKEDGFEPNVYTW--------------NAMQLFSEMLS--LDLTPDIYT 334
IE G + NV TW +A++LF+++ L P+ +T
Sbjct: 437 SIE------------GKDKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQKTSLKPNAFT 484
Query: 335 VGIILSACSSLATMERGKQVHAYAIRCGYDSDV-HIGTALVDMYAKCGSLKHARLAYKRI 393
+ L AC+ L + G+Q+HAYA+R +S+V ++G L+DMY+K G + AR + +
Sbjct: 485 LSCALMACARLGELRLGRQLHAYALRNENESEVLYVGNCLIDMYSKSGDIDAARAVFDNM 544
Query: 394 STPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGS 453
++VS +++T Y MHG G+E + F ++ GF D I+FL L AC H+G + G
Sbjct: 545 KLRNVVSWTSLMTGYGMHGRGEEALHLFDQMQKLGFAVDGITFLVVLYACSHSGMVDQGM 604
Query: 454 EFF-DLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVS 512
+F D++ + + P +HY CMVDLL RAG L EA E IK + M P +V+W ALL
Sbjct: 605 IYFHDMVKGFGITPGAEHYACMVDLLGRAGRLNEAMELIKNMSMEPTAVVWVALLSASRI 664
Query: 513 HGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCS 572
H N+E G+ AA +L EL N G+Y +L+NL+A A RW D+AR R MK + K PGCS
Sbjct: 665 HANIELGEYAASKLTELGAENDGSYTLLSNLYANARRWKDVARIRSLMKHTGIRKRPGCS 724
Query: 573 WIEDRDEIHKFRASDRSHDRSEEIYTII 600
WI+ + F DRSH SE+IY ++
Sbjct: 725 WIQGKKSTTTFFVGDRSHPESEQIYNLL 752
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 134/531 (25%), Positives = 230/531 (43%), Gaps = 87/531 (16%)
Query: 37 GLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNART 96
G EA+ L+R L + W+A+I + G ++ +G +MQ G P+ T
Sbjct: 73 GASAEAVSLLQR---LIPSHSTVFWWNALIRRSVKLGLLDDTLGFYCQMQRLGWLPDHYT 129
Query: 97 LSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKF- 155
VL AC + L G H + NG SN F+ N +V +Y RCG + A ++F +
Sbjct: 130 FPFVLKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEVL 189
Query: 156 --SIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDE 213
I++ VS N+I+ Y + G A +
Sbjct: 190 ERKIEDIVSWNSILAAYVQGGQSRTALRI------------------------------- 218
Query: 214 AFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALV 273
AF M ++ + P + T ++L ACA + +L+ GK++H ++ GL D FVG ALV
Sbjct: 219 AFRMGNHYSLK--LRPDAITLVNILPACASVFALQHGKQVHGFSVRNGLVDDVFVGNALV 276
Query: 274 EMYCRYQDLVAAQMAFDEIENIE---------------------NLLGKMKEDGFEPNVY 312
MY + + A F+ I+ + +L M+E+ + +V
Sbjct: 277 SMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVI 336
Query: 313 TWN--------------AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYA 358
TW+ A+ +F +M L P++ T+ +LS C+S+ + GKQ HAY
Sbjct: 337 TWSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNVVTLASLLSGCASVGALLYGKQTHAYV 396
Query: 359 IR-------CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPD--LVSQNAMLTAYA 409
I+ + D+ + L+DMYAKC S + AR + I D +V+ M+ YA
Sbjct: 397 IKNILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVARSIFDSIEGKDKNVVTWTVMIGGYA 456
Query: 410 MHGHGKEGIAHFRRIL--ASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPS 467
HG + + F +I + +P+ + AL AC G ++ G + + +
Sbjct: 457 QHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMACARLGELRLGRQLHAYALRNENESE 516
Query: 468 LKHY-TCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
+ + C++D+ S++G++ A + + + V W +L+ G HG E
Sbjct: 517 VLYVGNCLIDMYSKSGDIDAARAVFDNMKL-RNVVSWTSLMTGYGMHGRGE 566
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 128/474 (27%), Positives = 202/474 (42%), Gaps = 82/474 (17%)
Query: 125 FMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVG-YCENGNVAEARELF 183
F ++P + L+ + R+C +++A + + + VG Y E G AEA L
Sbjct: 24 FTTSPPTIP-LISLLRQCKTLINAKLAHQQIFVHGFTEMFSYAVGAYIECGASAEAVSLL 82
Query: 184 DQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACAD 243
++ + + WN++I V L D+ + + R G P +TF VL AC +
Sbjct: 83 QRL--IPSHSTVFWWNALIRRSVKLGLLDDTLGFYCQM-QRLGWLPDHYTFPFVLKACGE 139
Query: 244 MNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMK 303
+ SLR G +HA+ A GL S+ F+ ++V MY R L A FDE+ L +
Sbjct: 140 IPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEV------LERKI 193
Query: 304 EDGFEPNVYTWN--------------AMQLFSEM---LSLDLTPDIYTVGIILSACSSLA 346
ED + +WN A+++ M SL L PD T+ IL AC+S+
Sbjct: 194 ED-----IVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNILPACASVF 248
Query: 347 TMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLT 406
++ GKQVH +++R G DV +G ALV MYAKC + A ++ I D+VS NAM+T
Sbjct: 249 ALQHGKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVT 308
Query: 407 -----------------------------------AYAMHGHGKEGIAHFRRILASGFRP 431
YA GHG E + FR++ G P
Sbjct: 309 GYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEP 368
Query: 432 DHISFLSALSACVHAGSIKTGSEFFDL-------MAYYDVKPSLKHYTCMVDLLSRAGEL 484
+ ++ S LS C G++ G + + + D + L ++D+ ++
Sbjct: 369 NVVTLASLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSY 428
Query: 485 GEAYEFIKKIPMAPDSVM-WGALLGGCVSHGNLE-----FGQIAADRLIELEPN 532
A I +V+ W ++GG HG F QI + L+PN
Sbjct: 429 RVARSIFDSIEGKDKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQK-TSLKPN 481
>gi|297807711|ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317576|gb|EFH47998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 850
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 217/614 (35%), Positives = 329/614 (53%), Gaps = 51/614 (8%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +CGSL DA+KVF MP D +V
Sbjct: 171 MYSRCGSLSDARKVFDEMPVWD------------------------------------VV 194
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
SW+++I + + G + A+ M +M E G P+ TL +VLP CA + SLGK+FHG+
Sbjct: 195 SWNSIIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCASVGTRSLGKQFHGF 254
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ + N FV N LVD+Y + G M A +FS +K+ VS N ++ GY + G +A
Sbjct: 255 AVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDA 314
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
LF+QM+ ++ +++W++ ISGY L EA + R +L GI+P T SVL
Sbjct: 315 VRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQML-SSGIKPNEVTLISVLS 373
Query: 240 ACADMNSLRKGKEIHALAIAL-------GLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI 292
CA + +L GKEIH AI G + V L++MY + + + A+ FD +
Sbjct: 374 GCASVGALMHGKEIHCYAIKYPMDLRKNGHGDENMVINQLIDMYAKCKKVDIARAMFDSL 433
Query: 293 ENIEN--LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLT--PDIYTVGIILSACSSLATM 348
E + + G+ + A++L SEM D P+ +T+ L AC+SLA +
Sbjct: 434 SPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAAL 493
Query: 349 ERGKQVHAYAIRCGYDS-DVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTA 407
GKQ+HAYA+R ++ + + L+DMYAKCG + ARL + + + V+ +++T
Sbjct: 494 SIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGDIGDARLVFDNMMEKNEVTWTSLMTG 553
Query: 408 YAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKP 466
Y MHG+G+E + F + GF+ D ++ L L AC H+G I G E+F+ M + V P
Sbjct: 554 YGMHGYGEEALGIFEEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTDFGVSP 613
Query: 467 SLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRL 526
+HY C+VDLL RAG L A I+++PM P V+W ALL C HG +E G+ AA ++
Sbjct: 614 GPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVALLSCCRIHGKVELGEYAAKKI 673
Query: 527 IELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRAS 586
EL NN G+Y +L+N++A AGRW D+ R R M+ + + K PGCSW+E F
Sbjct: 674 TELASNNDGSYTLLSNMYANAGRWKDVTRIRSLMRHKGIKKRPGCSWVEGIKGTTTFFVG 733
Query: 587 DRSHDRSEEIYTII 600
D++H ++EIY ++
Sbjct: 734 DKTHPHAKEIYQVL 747
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 128/525 (24%), Positives = 215/525 (40%), Gaps = 89/525 (16%)
Query: 42 ALECLERMSSLDNETP----NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTL 97
+L CL SL P + W+++I + NG + + M + P+ T
Sbjct: 71 SLGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGNNGRANKCLSSFCLMHSLSWTPDNYTF 130
Query: 98 SSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSI 157
V AC + + G H GFMSN FV N LV +Y RCG + A K+F + +
Sbjct: 131 PFVFKACGEISSVRCGDSSHALSRVTGFMSNVFVGNALVAMYSRCGSLSDARKVFDEMPV 190
Query: 158 KNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSM 217
+ VS N+II Y + G A E+F +M +
Sbjct: 191 WDVVSWNSIIESYAKLGKPKMALEMFSKMTN----------------------------- 221
Query: 218 FRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYC 277
G P T +VL CA + + GK+ H A+ + + FVG LV+MY
Sbjct: 222 ------EFGFRPDDITLVNVLPPCASVGTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMYA 275
Query: 278 RY---------------------QDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWN- 315
++ +VA E+ L +M+E+ + +V TW+
Sbjct: 276 KFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSA 335
Query: 316 -------------AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRC- 361
A+ + +MLS + P+ T+ +LS C+S+ + GK++H YAI+
Sbjct: 336 AISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYP 395
Query: 362 ------GYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTP--DLVSQNAMLTAYAMHGH 413
G+ + + L+DMYAKC + AR + +S D+V+ M+ Y+ HG
Sbjct: 396 MDLRKNGHGDENMVINQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVMIGGYSQHGD 455
Query: 414 GKEGIAHFRRILASG--FRPDHISFLSALSACVHAGSIKTGSEF--FDLMAYYDVKPSLK 469
+ + + RP+ + AL AC ++ G + + L + P L
Sbjct: 456 ANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALSIGKQIHAYALRNQQNAVP-LF 514
Query: 470 HYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
C++D+ ++ G++G+A + M + V W +L+ G HG
Sbjct: 515 VSNCLIDMYAKCGDIGDARLVFDNM-MEKNEVTWTSLMTGYGMHG 558
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 98/366 (26%), Positives = 162/366 (44%), Gaps = 45/366 (12%)
Query: 194 GIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEI 253
G+ WNS+I Y +N ++ S F L+ P ++TF V AC +++S+R G
Sbjct: 91 GVYHWNSLIRSYGNNGRANKCLSSF-CLMHSLSWTPDNYTFPFVFKACGEISSVRCGDSS 149
Query: 254 HALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYT 313
HAL+ G S+ FVG ALV MY R L A+ FDE+ + + + +
Sbjct: 150 HALSRVTGFMSNVFVGNALVAMYSRCGSLSDARKVFDEMPVWDVVSWNSIIESYAKLGKP 209
Query: 314 WNAMQLFSEMLS-LDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTA 372
A+++FS+M + PD T+ +L C+S+ T GKQ H +A+ ++ +G
Sbjct: 210 KMALEMFSKMTNEFGFRPDDITLVNVLPPCASVGTRSLGKQFHGFAVTSEMIQNMFVGNC 269
Query: 373 LVDMYAKCGSLKHARLAYKRISTPDLVSQNAM---------------------------- 404
LVDMYAK G + A + + D+VS NAM
Sbjct: 270 LVDMYAKFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMD 329
Query: 405 -------LTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFD 457
++ YA G G E + R++L+SG +P+ ++ +S LS C G++ G E
Sbjct: 330 VVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHC 389
Query: 458 LMAYYDVKPSLKHY-------TCMVDLLSRAGELGEAYEFIKKI-PMAPDSVMWGALLGG 509
Y + + ++D+ ++ ++ A + P D V W ++GG
Sbjct: 390 YAIKYPMDLRKNGHGDENMVINQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVMIGG 449
Query: 510 CVSHGN 515
HG+
Sbjct: 450 YSQHGD 455
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 111/229 (48%), Gaps = 19/229 (8%)
Query: 307 FEPN---VYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSSLATME 349
F P+ VY WN++ F M SL TPD YT + AC ++++
Sbjct: 85 FPPSDAGVYHWNSLIRSYGNNGRANKCLSSFCLMHSLSWTPDNYTFPFVFKACGEISSVR 144
Query: 350 RGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYA 409
G HA + G+ S+V +G ALV MY++CGSL AR + + D+VS N+++ +YA
Sbjct: 145 CGDSSHALSRVTGFMSNVFVGNALVAMYSRCGSLSDARKVFDEMPVWDVVSWNSIIESYA 204
Query: 410 MHGHGKEGIAHFRRILAS-GFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSL 468
G K + F ++ GFRPD I+ ++ L C G+ G +F ++ ++
Sbjct: 205 KLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCASVGTRSLGKQFHGFAVTSEMIQNM 264
Query: 469 KHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
C+VD+ ++ G + EA +P+ D V W A++ G G E
Sbjct: 265 FVGNCLVDMYAKFGMMDEANTVFSNMPVK-DVVSWNAMVAGYSQIGRFE 312
>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
Length = 805
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 211/618 (34%), Positives = 337/618 (54%), Gaps = 76/618 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERM---SSLDNETP 57
+Y CG L + ++VF M +++ WN +V+ A G E++ CL ++ ++ + P
Sbjct: 143 LYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESI-CLFKIMVEKGIEGKRP 201
Query: 58 -------------NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPAC 104
+++SW+++I G+ NG E + + +M G++ + T+ SVL C
Sbjct: 202 ESASELFDKLCDRDVISWNSMISGYVSNGLTERGLEIYKQMMYLGIDVDLATIISVLVGC 261
Query: 105 ARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCN 164
A LSLGK H ++ F N L+D+Y +CGD+ AL++F K
Sbjct: 262 ANSGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYSKCGDLDGALRVFEKMG-------- 313
Query: 165 TIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMR 224
+R ++SW SMI+GY + D A + + + +
Sbjct: 314 ---------------------------ERNVVSWTSMIAGYTRDGRSDGAIRLLQQM-EK 345
Query: 225 DGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVA 284
+G++ S+L ACA SL GK++H A ++S+ FV AL++MY + +
Sbjct: 346 EGVKLDVVATTSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYTKCGSMDG 405
Query: 285 AQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSS 344
A F + ++ +WN M +L PD T+ IL AC+S
Sbjct: 406 ANSVFSTM--------------VVKDIISWNTM-------IGELKPDSRTMACILPACAS 444
Query: 345 LATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAM 404
L+ +ERGK++H Y +R GY SD H+ ALVD+Y KCG L ARL + I + DLVS M
Sbjct: 445 LSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVM 504
Query: 405 LTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YD 463
++ Y MHG+G E IA F + +G PD +SF+S L AC H+G ++ G FF +M ++
Sbjct: 505 ISGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFN 564
Query: 464 VKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAA 523
++P L+HY CMVDLLSR G L +AYEFI+ +P+APD+ +WGALL GC + ++E + A
Sbjct: 565 IEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGCRIYHDIELAEKVA 624
Query: 524 DRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKF 583
+R+ ELEP NTG YV+LAN++A A +W ++ R R+K+ + + K+PGCSWIE + +++ F
Sbjct: 625 ERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKGLRKNPGCSWIEIKGKVNLF 684
Query: 584 -RASDRSHDRSEEIYTII 600
++ SH S++I +++
Sbjct: 685 VSGNNSSHPHSKKIESLL 702
>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
Length = 886
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 217/635 (34%), Positives = 339/635 (53%), Gaps = 77/635 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPER---DCVSWNSVVTACAANGLVLEALECLERMSSLDNETP 57
MY + GSL+DA VF + + D +SWNS+V A AL+ M+++ +E
Sbjct: 193 MYSRSGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHE-- 250
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
+A + ++ ++LPACA L+ L KE H
Sbjct: 251 ----------------------------KATNERSDIISIVNILPACASLKALPQTKEIH 282
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
Y RNG ++ FV N L+D Y +CG M A+ +F+ K+ VS N ++ GY ++G
Sbjct: 283 SYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKDVVSWNAMVTGYTQSGKFG 342
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
A ELF M + +I+W+++I+GY EA F+ +++ G EP S T S+
Sbjct: 343 AAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQQMILY-GSEPNSVTIISL 401
Query: 238 LIACADMNSLRKGKEIHALAIALGLQS------------DTFVGGALVEMYCRYQDLVAA 285
L ACA + +L +G E HA ++ L S D V AL++MY + + AA
Sbjct: 402 LSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDMYSKCRSFKAA 461
Query: 286 QMAFDEIENIENLLGKMKEDGFEPNVYTW--------------NAMQLFSEMLS--LDLT 329
+ F+ I E NV TW +A++LFSEM+S +
Sbjct: 462 RTIFNSIPRRER------------NVVTWTVMIGGYAQYGDSNDALKLFSEMISKPYAVA 509
Query: 330 PDIYTVGIILSACSSLATMERGKQVHAYAIRCG-YDSDVH-IGTALVDMYAKCGSLKHAR 387
P+ YT+ IL AC+ L+++ GKQ+HAY R Y+S V+ + L+DMY+KCG + AR
Sbjct: 510 PNAYTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDMYSKCGDVDTAR 569
Query: 388 LAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAG 447
+ + + VS +M++ Y MHG GKE + F ++ +GF PD ISFL L AC H+G
Sbjct: 570 NVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSG 629
Query: 448 SIKTGSEFFDLM-AYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGAL 506
+ G ++FD+M + Y V S +HY C++DLL+R+G L +A++ I+++PM P + +W AL
Sbjct: 630 MVDQGLDYFDIMRSDYGVIASAQHYACVIDLLARSGRLDKAWKTIQEMPMEPSAAIWVAL 689
Query: 507 LGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMH 566
L C H N+E + A ++L+ ++ N G+Y +++N++A A RW D+AR RQ MK +
Sbjct: 690 LSACRVHSNVELAEYALNKLVSMKAENDGSYTLISNIYATARRWKDVARIRQLMKKSGIK 749
Query: 567 KSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
K PGCSW++ + F DRSH S EIY++++
Sbjct: 750 KRPGCSWVQGKKGTASFFVGDRSHPLSPEIYSLLE 784
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 141/557 (25%), Positives = 244/557 (43%), Gaps = 96/557 (17%)
Query: 18 MPERDCVSWNS----VVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNG 73
+P VS S VV + A G +AL LER+ +P V W+ ++ + G
Sbjct: 74 LPSHSYVSPKSLGTGVVASYLACGATSDALSVLERVV----PSP-AVWWNLLVRAHIEEG 128
Query: 74 YDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVN 133
+ AIG+ RM G +P+ TL L AC L G FHG I NGF SN FV N
Sbjct: 129 RLDRAIGVSCRMLRAGTKPDHFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCN 188
Query: 134 GLVDVYRRCGDMLSALKIFSKFS---IKNEVSCNTIIVGYCENGNVAEARELFDQMEHLG 190
LV +Y R G + A +F + + I + +S N+I+ + + N A +LF +M +
Sbjct: 189 ALVAMYSRSGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTI- 247
Query: 191 VQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKG 250
++++A + D++ + ++L ACA + +L +
Sbjct: 248 -------------------VHEKATNERSDII----------SIVNILPACASLKALPQT 278
Query: 251 KEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE-------------- 296
KEIH+ AI G +D FV AL++ Y + + A F+ +E +
Sbjct: 279 KEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKDVVSWNAMVTGYTQS 338
Query: 297 -------NLLGKMKEDGFEPNVYTWN--------------AMQLFSEMLSLDLTPDIYTV 335
L M+++ +V TW+ A+ F +M+ P+ T+
Sbjct: 339 GKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQQMILYGSEPNSVTI 398
Query: 336 GIILSACSSLATMERGKQVHAYAIR------------CGYDSDVHIGTALVDMYAKCGSL 383
+LSAC+SL + +G + HAY+++ G D+ + AL+DMY+KC S
Sbjct: 399 ISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDMYSKCRSF 458
Query: 384 KHARLAYKRISTPD--LVSQNAMLTAYAMHGHGKEGIAHFRRILASGF--RPDHISFLSA 439
K AR + I + +V+ M+ YA +G + + F +++ + P+ +
Sbjct: 459 KAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMISKPYAVAPNAYTISCI 518
Query: 440 LSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYT--CMVDLLSRAGELGEAYEFIKKIPMA 497
L AC H S++ G + + + S ++ C++D+ S+ G++ A +P
Sbjct: 519 LMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDMYSKCGDVDTARNVFDSMPKR 578
Query: 498 PDSVMWGALLGGCVSHG 514
+ V W +++ G HG
Sbjct: 579 -NEVSWTSMMSGYGMHG 594
>gi|188509949|gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
Length = 667
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 213/617 (34%), Positives = 334/617 (54%), Gaps = 76/617 (12%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECL--------------E 47
Y CG L + ++VF M +++ WN +V+ A G E++ CL E
Sbjct: 6 YATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESI-CLFKIMVEKGIEGKRSE 64
Query: 48 RMSSLDNET--PNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACA 105
S L ++ +++SW+++I G+ NG E +G+ +M G++ + T+ SVL CA
Sbjct: 65 SASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCA 124
Query: 106 RLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNT 165
+ LSLGK H ++ F N L+D+Y +CGD+ AL++F K
Sbjct: 125 KSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMG--------- 175
Query: 166 IIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRD 225
+R ++SW SMI+GY + D A + + + ++
Sbjct: 176 --------------------------ERNVVSWTSMIAGYTRDGWSDGAIILLQQM-EKE 208
Query: 226 GIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAA 285
G++ S+L ACA SL GK++H A + S+ FV AL++MY + + A
Sbjct: 209 GVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGA 268
Query: 286 QMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSL 345
F + ++ +WN M +L PD T+ IL AC+SL
Sbjct: 269 NSVFSTM--------------VVKDIISWNTM-------VGELKPDSRTMACILPACASL 307
Query: 346 ATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAML 405
+ +ERGK++H Y +R GY SD H+ ALVD+Y KCG L ARL + I + DLVS M+
Sbjct: 308 SALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMI 367
Query: 406 TAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDV 464
Y MHG+G E IA F + +G PD +SF+S L AC H+G ++ G FF +M +++
Sbjct: 368 AGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNI 427
Query: 465 KPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAAD 524
+P L+HY CMVDLLSR G L +AY+FI+ +P+APD+ +WGALL GC + ++E + A+
Sbjct: 428 EPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGCRIYHDIELAEKVAE 487
Query: 525 RLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKF- 583
R+ ELEP NTG YV+LAN++A A +W ++ R R+K+ + + K+PGCSWIE + ++ F
Sbjct: 488 RVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKGLRKNPGCSWIEIKGRVNLFV 547
Query: 584 RASDRSHDRSEEIYTII 600
++ SH S++I +++
Sbjct: 548 SGNNSSHPHSKKIESLL 564
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 106/396 (26%), Positives = 170/396 (42%), Gaps = 39/396 (9%)
Query: 135 LVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQ-- 192
LV Y CGD+ ++F KN N ++ Y + G+ E+ LF M G++
Sbjct: 2 LVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGK 61
Query: 193 --------------RGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
R +ISWNSMISGYV N L + +++ +M GI+ T SVL
Sbjct: 62 RSESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQ-MMYLGIDVDLATIISVL 120
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
+ CA +L GK +H+LAI + L++MY + DL A F+++ +
Sbjct: 121 VGCAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVV 180
Query: 299 LGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYA 358
G+ + ++ A+ L +M + D+ + IL AC+ +++ GK VH Y
Sbjct: 181 SWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYI 240
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGI 418
S++ + AL+DMYAKCGS++ A + + D++S N M+
Sbjct: 241 KANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGE----------- 289
Query: 419 AHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLL 478
+PD + L AC +++ G E + +VDL
Sbjct: 290 ----------LKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLY 339
Query: 479 SRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
+ G LG A IP + D V W ++ G HG
Sbjct: 340 VKCGVLGLARLLFDMIP-SKDLVSWTVMIAGYGMHG 374
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 135/296 (45%), Gaps = 84/296 (28%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG LD A +VF+ M ER+ VSW S
Sbjct: 157 MYSKCGDLDGALRVFEKMGERNVVSWTS-------------------------------- 184
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+I G+T++G+ + AI +L +M+ EG++ + ++S+L ACAR L GK+ H YI
Sbjct: 185 ----MIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYI 240
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTII------------- 167
N SN FV N L+D+Y +CG M A +FS +K+ +S NT++
Sbjct: 241 KANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGELKPDSRTMACI 300
Query: 168 ----------------------VGYCENGNVAEAR-ELFDQMEHLGVQR---------GI 195
GY + +VA A +L+ + LG+ R +
Sbjct: 301 LPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDL 360
Query: 196 ISWNSMISGYVDNSLYDEAFSMFRDLLMRD-GIEPTSFTFGSVLIACADMNSLRKG 250
+SW MI+GY + +EA + F + MRD GIEP +F S+L AC+ L +G
Sbjct: 361 VSWTVMIAGYGMHGYGNEAIATFNE--MRDAGIEPDEVSFISILYACSHSGLLEQG 414
>gi|222622013|gb|EEE56145.1| hypothetical protein OsJ_05030 [Oryza sativa Japonica Group]
Length = 742
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 212/599 (35%), Positives = 340/599 (56%), Gaps = 14/599 (2%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y K G L A++VF MP+ + + N++++A A + LV + M D VS
Sbjct: 58 YAKSGRLARARRVFDEMPDPNLFTRNALLSALAHSRLVPDMERLFASMPERDA-----VS 112
Query: 62 WSAVIGGFTQNGYDEEAIGMLFR--MQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
++A+I GF+ G ++ L+R ++ E + P TLS+++ + L +LG H
Sbjct: 113 YNALITGFSSTGSPARSV-QLYRALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQ 171
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ R GF + FV + LVD+Y + G + A ++F + K V NT+I G + +A
Sbjct: 172 VLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDA 231
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
+ LF M V R I+W +M++G N L EA +FR + +G+ +TFGS+L
Sbjct: 232 KGLFQLM----VDRDSITWTTMVTGLTQNGLQLEALDVFRRM-RAEGVGIDQYTFGSILT 286
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
AC + +L +GK+IHA + + FVG ALV+MY + + + A+ F + +
Sbjct: 287 ACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIIS 346
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
G+ N + A++ FSEM + PD +T+G ++S+C++LA++E G Q H A+
Sbjct: 347 WTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLAL 406
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
G + + ALV +Y KCGS++ A + +S D VS A++T YA G KE I
Sbjct: 407 VSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETID 466
Query: 420 HFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLL 478
F ++LA+G +PD ++F+ LSAC AG ++ G ++FD M + + P HYTCM+DL
Sbjct: 467 LFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHYTCMIDLY 526
Query: 479 SRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYV 538
SR+G EA EFIK++P +PD+ W LL C GN+E G+ AA+ L+E +P N +YV
Sbjct: 527 SRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDPQNPASYV 586
Query: 539 MLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
+L ++ A G+W+++A R+ M+DR++ K PGCSWI+ ++++H F A D+SH S IY
Sbjct: 587 LLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSSRIY 645
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 125/429 (29%), Positives = 200/429 (46%), Gaps = 63/429 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G + DA++VF+ M + V +N+++T ++ +A + M D+ +
Sbjct: 190 MYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDS-----I 244
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+ ++ G TQNG EA+ + RM+AEG+ + T S+L AC L L GK+ H YI
Sbjct: 245 TWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYI 304
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
TR + N FV + LVD+Y +C + A +F + + +N +S +IVGY +N EA
Sbjct: 305 TRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAV 364
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
F +M+ DGI+P FT GSV+ +
Sbjct: 365 RAFSEMQ------------------------------------MDGIKPDDFTLGSVISS 388
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA++ SL +G + H LA+ GL V ALV +Y + + A FDE+ + +
Sbjct: 389 CANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSW 448
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G+ + LF +ML+ L PD T +LSACS +E+G
Sbjct: 449 TALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKG--------- 499
Query: 361 CGY-DS----------DVHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNAMLTAY 408
C Y DS D H T ++D+Y++ G K A K++ +PD +L++
Sbjct: 500 CDYFDSMQKDHGIVPIDDHY-TCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSC 558
Query: 409 AMHGHGKEG 417
+ G+ + G
Sbjct: 559 RLRGNMEIG 567
>gi|115443695|ref|NP_001045627.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|50252103|dbj|BAD28089.1| putative pentatricopeptide (PPR) repeat-containing protein-like
protein [Oryza sativa Japonica Group]
gi|113535158|dbj|BAF07541.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|215766741|dbj|BAG98969.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 751
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 212/599 (35%), Positives = 340/599 (56%), Gaps = 14/599 (2%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y K G L A++VF MP+ + + N++++A A + LV + M D VS
Sbjct: 58 YAKSGRLARARRVFDEMPDPNLFTRNALLSALAHSRLVPDMERLFASMPERDA-----VS 112
Query: 62 WSAVIGGFTQNGYDEEAIGMLFR--MQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
++A+I GF+ G ++ L+R ++ E + P TLS+++ + L +LG H
Sbjct: 113 YNALITGFSSTGSPARSV-QLYRALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQ 171
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ R GF + FV + LVD+Y + G + A ++F + K V NT+I G + +A
Sbjct: 172 VLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDA 231
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
+ LF M V R I+W +M++G N L EA +FR + +G+ +TFGS+L
Sbjct: 232 KGLFQLM----VDRDSITWTTMVTGLTQNGLQLEALDVFRRM-RAEGVGIDQYTFGSILT 286
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
AC + +L +GK+IHA + + FVG ALV+MY + + + A+ F + +
Sbjct: 287 ACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIIS 346
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
G+ N + A++ FSEM + PD +T+G ++S+C++LA++E G Q H A+
Sbjct: 347 WTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLAL 406
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
G + + ALV +Y KCGS++ A + +S D VS A++T YA G KE I
Sbjct: 407 VSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETID 466
Query: 420 HFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLL 478
F ++LA+G +PD ++F+ LSAC AG ++ G ++FD M + + P HYTCM+DL
Sbjct: 467 LFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHYTCMIDLY 526
Query: 479 SRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYV 538
SR+G EA EFIK++P +PD+ W LL C GN+E G+ AA+ L+E +P N +YV
Sbjct: 527 SRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDPQNPASYV 586
Query: 539 MLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
+L ++ A G+W+++A R+ M+DR++ K PGCSWI+ ++++H F A D+SH S IY
Sbjct: 587 LLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSSRIY 645
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 125/429 (29%), Positives = 200/429 (46%), Gaps = 63/429 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G + DA++VF+ M + V +N+++T ++ +A + M D+ +
Sbjct: 190 MYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDS-----I 244
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+ ++ G TQNG EA+ + RM+AEG+ + T S+L AC L L GK+ H YI
Sbjct: 245 TWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYI 304
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
TR + N FV + LVD+Y +C + A +F + + +N +S +IVGY +N EA
Sbjct: 305 TRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAV 364
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
F +M+ DGI+P FT GSV+ +
Sbjct: 365 RAFSEMQ------------------------------------MDGIKPDDFTLGSVISS 388
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA++ SL +G + H LA+ GL V ALV +Y + + A FDE+ + +
Sbjct: 389 CANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSW 448
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G+ + LF +ML+ L PD T +LSACS +E+G
Sbjct: 449 TALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKG--------- 499
Query: 361 CGY-DS----------DVHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNAMLTAY 408
C Y DS D H T ++D+Y++ G K A K++ +PD +L++
Sbjct: 500 CDYFDSMQKDHGIVPIDDHY-TCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSC 558
Query: 409 AMHGHGKEG 417
+ G+ + G
Sbjct: 559 RLRGNMEIG 567
>gi|357127622|ref|XP_003565478.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Brachypodium distachyon]
Length = 870
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 218/601 (36%), Positives = 329/601 (54%), Gaps = 47/601 (7%)
Query: 6 GSLDDAKKVFKMMPE----RDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
GS++D + V ++ + C N+++ A + +A+ + M D ++S
Sbjct: 210 GSIEDGEVVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMPHRD-----VIS 264
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W+++I G T NG ++AI + RM EG E ++ TL SVLPACA L L LG+ HGY
Sbjct: 265 WNSMISGCTSNGLYDKAIELFVRMWLEGEELDSATLLSVLPACAELHLLFLGRVVHGYSV 324
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
+ GF+S + N L+D+Y C D S KIF
Sbjct: 325 KTGFISQTSLANVLLDMYSNCSDWRSTNKIFRNM-------------------------- 358
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
VQ+ ++SW +MI+ Y LYD+ +F+++ + +G P F S L A
Sbjct: 359 ---------VQKNVVSWTAMITSYTRAGLYDKVAGLFQEMGL-EGTRPDIFAITSALHAF 408
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK 301
A L+ GK +H AI G++ V AL+EMY + ++ A++ FD + + + +
Sbjct: 409 AGNELLKHGKSVHGYAIRNGMEKVLAVTNALMEMYVKCGNMEEAKLIFDGVVSKDMISWN 468
Query: 302 MKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRC 361
G+ N A LF+EML L L P+ T+ IL A +SL+++ERG+++HAYA+R
Sbjct: 469 TLIGGYSRNNLANEAFSLFTEML-LQLRPNAVTMTCILPAAASLSSLERGREMHAYALRR 527
Query: 362 GYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHF 421
GY D + AL+DMY KCG+L AR + R+S +L+S M+ Y MHG G++ IA F
Sbjct: 528 GYLEDDFVANALIDMYVKCGALLLARRLFDRLSNKNLISWTIMVAGYGMHGRGRDAIALF 587
Query: 422 RRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMVDLLSR 480
++ SG PD SF + L AC H+G G FFD M + ++P LKHYTCMVDLL
Sbjct: 588 EQMRVSGIAPDAASFSAILYACSHSGLRDEGWRFFDAMRKEHKIEPRLKHYTCMVDLLIN 647
Query: 481 AGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVML 540
G L EAYEFI +P+ PDS +W +LL GC H N++ + A+R+ ELEP NTG YV+L
Sbjct: 648 TGNLKEAYEFIDSMPIEPDSSIWVSLLRGCRIHRNVKLAEEVAERVFELEPENTGYYVLL 707
Query: 541 ANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTII 600
AN++A A RW + + + K+ R + ++ GCSWIE + ++H F A +R+H + I +
Sbjct: 708 ANIYAEAERWEAVRKLKNKIGGRGLRENTGCSWIEAKGKVHVFIADNRNHPQGTRIAEFL 767
Query: 601 D 601
+
Sbjct: 768 N 768
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/388 (26%), Positives = 168/388 (43%), Gaps = 76/388 (19%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY C K+F+ M +++ VSW +++T+
Sbjct: 341 MYSNCSDWRSTNKIFRNMVQKNVVSWTAMITS---------------------------- 372
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+T+ G ++ G+ M EG P+ ++S L A A + L GK HGY
Sbjct: 373 --------YTRAGLYDKVAGLFQEMGLEGTRPDIFAITSALHAFAGNELLKHGKSVHGYA 424
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
RNG V N L+++Y +CG+M A IF K+ +S NT+I GY N
Sbjct: 425 IRNGMEKVLAVTNALMEMYVKCGNMEEAKLIFDGVVSKDMISWNTLIGGYSRN------- 477
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+L +EAFS+F ++L++ + P + T +L A
Sbjct: 478 ----------------------------NLANEAFSLFTEMLLQ--LRPNAVTMTCILPA 507
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
A ++SL +G+E+HA A+ G D FV AL++MY + L+ A+ FD + N +
Sbjct: 508 AASLSSLERGREMHAYALRRGYLEDDFVANALIDMYVKCGALLLARRLFDRLSNKNLISW 567
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
+ G+ + +A+ LF +M + PD + IL ACS + G + A+R
Sbjct: 568 TIMVAGYGMHGRGRDAIALFEQMRVSGIAPDAASFSAILYACSHSGLRDEGWRFFD-AMR 626
Query: 361 CGYDSDVHIG--TALVDMYAKCGSLKHA 386
+ + + T +VD+ G+LK A
Sbjct: 627 KEHKIEPRLKHYTCMVDLLINTGNLKEA 654
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 129/513 (25%), Positives = 221/513 (43%), Gaps = 56/513 (10%)
Query: 55 ETPNLVSWSAV---IGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLS 111
++P+ V S V I ++G EEA+G+L ++G++ R+ +VL C+ ++ L
Sbjct: 54 KSPDWVPTSDVNLHIQRLCRSGDLEEALGLL---GSDGVDD--RSYGAVLQLCSEVRSLE 108
Query: 112 LGKEFHGYITRNGFMSNPFVVN----GLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTII 167
GK H ++ R + + N LV +Y +CGD+
Sbjct: 109 GGKRAH-FLVRASSLGRDGMDNVLGQKLVLMYLKCGDL---------------------- 145
Query: 168 VGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGI 227
EN AR +FD+M + R W +++SGY E +FR + G+
Sbjct: 146 ----EN-----ARRVFDEMPQVSDVR---VWTALMSGYAKAGDLREGVLLFRKMHC-CGV 192
Query: 228 EPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQM 287
P ++T VL A + S+ G+ +H L LG S VG AL+ Y + A +
Sbjct: 193 RPDAYTISCVLKCIAGLGSIEDGEVVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAIL 252
Query: 288 AFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLAT 347
FD + + + + G N A++LF M D T+ +L AC+ L
Sbjct: 253 VFDGMPHRDVISWNSMISGCTSNGLYDKAIELFVRMWLEGEELDSATLLSVLPACAELHL 312
Query: 348 MERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTA 407
+ G+ VH Y+++ G+ S + L+DMY+ C + ++ + ++VS AM+T+
Sbjct: 313 LFLGRVVHGYSVKTGFISQTSLANVLLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMITS 372
Query: 408 YAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPS 467
Y G + F+ + G RPD + SAL A +K G ++
Sbjct: 373 YTRAGLYDKVAGLFQEMGLEGTRPDIFAITSALHAFAGNELLKHGKSVHGYAIRNGMEKV 432
Query: 468 LKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNL--EFGQIAADR 525
L ++++ + G + EA + I ++ D + W L+GG S NL E + +
Sbjct: 433 LAVTNALMEMYVKCGNMEEA-KLIFDGVVSKDMISWNTLIGG-YSRNNLANEAFSLFTEM 490
Query: 526 LIELEPNNTGNYVMLANLFAYAGRWSDLARTRQ 558
L++L PN V + + A S L R R+
Sbjct: 491 LLQLRPNA----VTMTCILPAAASLSSLERGRE 519
>gi|255567371|ref|XP_002524665.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536026|gb|EEF37684.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 2000
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 212/629 (33%), Positives = 349/629 (55%), Gaps = 43/629 (6%)
Query: 6 GSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAV 65
G+LD+A+K+F MP+ + +SW ++++ G V E++ ER N N+VSW+A
Sbjct: 101 GNLDEARKLFDEMPQTNEISWTALISGFMKYGRVRESMWYFER-----NPFQNVVSWTAA 155
Query: 66 IGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGF 125
I G+ QNG+ EA+ + ++ ++PN T +SV+ ACA L LG G I + G+
Sbjct: 156 ISGYVQNGFSVEAMKLFIKLLESEVKPNKVTFTSVVRACANLGDFGLGMSVLGLIVKTGY 215
Query: 126 MSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQ 185
+ V N L+ + R G++ A ++F + K+ VS I+ Y E + EAR +FD+
Sbjct: 216 EHDLAVSNSLITLCLRMGEIHLAREVFDRMEEKDVVSWTAILDLYVEMDELGEARRIFDE 275
Query: 186 MEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMN 245
M QR +SW++MI+ Y + +E+ +F ++ ++G +P F S+L A A +
Sbjct: 276 MP----QRNEVSWSAMIARYCQSGYPEESLRLFCRMI-QEGFKPNISCFSSILSALASVE 330
Query: 246 SLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI--ENI-------- 295
+L+ G IH +G + D FV +L++MYC+ + + FD I +N+
Sbjct: 331 ALQAGMNIHGHVTKIGFEKDVFVSSSLIDMYCKCGETKDGRFLFDTILEKNMVSWNAMVG 390
Query: 296 -ENLLGKMKEDGFEPNV------YTWNAM--------------QLFSEMLSLDLTPDIYT 334
+L G M+E + N+ +W+A+ ++F+EM+ L P+ T
Sbjct: 391 GYSLNGHMEEAKYLFNIMPVRNNVSWSAIIAGHLDCEQFDEMFEVFNEMILLGEIPNKST 450
Query: 335 VGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS 394
+L AC+S A++++GK +H ++ G D ++GTAL DMYAK G ++ ++ + R+
Sbjct: 451 FSSLLCACASTASLDKGKNLHGKIVKLGIQCDTYVGTALTDMYAKSGDIESSKKVFNRMP 510
Query: 395 TPDLVSQNAMLTAYAMHGHGKEGIAHFRRI-LASGFRPDHISFLSALSACVHAGSIKTGS 453
+ VS AM+ A G +E + F + S P+ + FL+ L AC H+G + G
Sbjct: 511 KKNEVSWTAMIQGLAESGLAEESLTLFEEMEKTSSIAPNEVMFLAVLFACSHSGLVDKGL 570
Query: 454 EFFDLM-AYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVS 512
+F+ M A Y +KP +H+TC+VD+LSRAG L EA EFI +P P++ W ALL GC +
Sbjct: 571 WYFNSMEAVYGLKPKGRHFTCVVDMLSRAGRLFEAEEFIYSMPFQPETNAWAALLSGCKT 630
Query: 513 HGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCS 572
+ N E + A +L E+ N YV+L+N++A AGRW D+ + R+ MK + + KS GCS
Sbjct: 631 YKNEELAERVAGKLWEMAEKNCAGYVLLSNIYASAGRWRDVLKVRKLMKAKGLKKSGGCS 690
Query: 573 WIEDRDEIHKFRASDRSHDRSEEIYTIID 601
W+E RD +H F + D +H +S EIY I++
Sbjct: 691 WVEIRDRVHSFYSEDGAHSQSAEIYEILE 719
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 126/406 (31%), Positives = 208/406 (51%), Gaps = 13/406 (3%)
Query: 4 KCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWS 63
+ G + A++VF M E+D VSW +++ + EA + M N VSWS
Sbjct: 231 RMGEIHLAREVFDRMEEKDVVSWTAILDLYVEMDELGEARRIFDEMPQ-----RNEVSWS 285
Query: 64 AVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRN 123
A+I + Q+GY EE++ + RM EG +PN SS+L A A ++ L G HG++T+
Sbjct: 286 AMIARYCQSGYPEESLRLFCRMIQEGFKPNISCFSSILSALASVEALQAGMNIHGHVTKI 345
Query: 124 GFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELF 183
GF + FV + L+D+Y +CG+ +F KN VS N ++ GY NG++ EA+ LF
Sbjct: 346 GFEKDVFVSSSLIDMYCKCGETKDGRFLFDTILEKNMVSWNAMVGGYSLNGHMEEAKYLF 405
Query: 184 DQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACAD 243
+ M R +SW+++I+G++D +DE F +F ++++ I P TF S+L ACA
Sbjct: 406 NIMP----VRNNVSWSAIIAGHLDCEQFDEMFEVFNEMILLGEI-PNKSTFSSLLCACAS 460
Query: 244 MNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMK 303
SL KGK +H + LG+Q DT+VG AL +MY + D+ +++ F+ + +
Sbjct: 461 TASLDKGKNLHGKIVKLGIQCDTYVGTALTDMYAKSGDIESSKKVFNRMPKKNEVSWTAM 520
Query: 304 EDGFEPNVYTWNAMQLFSEM-LSLDLTPDIYTVGIILSACSSLATMERGK-QVHAYAIRC 361
G + ++ LF EM + + P+ +L ACS +++G ++
Sbjct: 521 IQGLAESGLAEESLTLFEEMEKTSSIAPNEVMFLAVLFACSHSGLVDKGLWYFNSMEAVY 580
Query: 362 GYDSDVHIGTALVDMYAKCGSLKHA-RLAYKRISTPDLVSQNAMLT 406
G T +VDM ++ G L A Y P+ + A+L+
Sbjct: 581 GLKPKGRHFTCVVDMLSRAGRLFEAEEFIYSMPFQPETNAWAALLS 626
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 118/496 (23%), Positives = 212/496 (42%), Gaps = 76/496 (15%)
Query: 112 LGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYC 171
+ K+F G+ + V N ++ + G++ A K+F + NE+S +I G+
Sbjct: 78 ISKDFDGF--------DLVVHNCMISANVQRGNLDEARKLFDEMPQTNEISWTALISGFM 129
Query: 172 ENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTS 231
+ G V E+ F++ + ++SW + ISGYV N EA +F LL + ++P
Sbjct: 130 KYGRVRESMWYFERNPF----QNVVSWTAAISGYVQNGFSVEAMKLFIKLLESE-VKPNK 184
Query: 232 FTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDE 291
TF SV+ ACA++ G + L + G + D V +L+ + R ++ A+ FD
Sbjct: 185 VTFTSVVRACANLGDFGLGMSVLGLIVKTGYEHDLAVSNSLITLCLRMGEIHLAREVFDR 244
Query: 292 IEN--------IENLLGKMKEDG---------FEPNVYTWNAM--------------QLF 320
+E I +L +M E G + N +W+AM +LF
Sbjct: 245 MEEKDVVSWTAILDLYVEMDELGEARRIFDEMPQRNEVSWSAMIARYCQSGYPEESLRLF 304
Query: 321 SEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKC 380
M+ P+I ILSA +S+ ++ G +H + + G++ DV + ++L+DMY KC
Sbjct: 305 CRMIQEGFKPNISCFSSILSALASVEALQAGMNIHGHVTKIGFEKDVFVSSSLIDMYCKC 364
Query: 381 GSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEG----------------------- 417
G K R + I ++VS NAM+ Y+++GH +E
Sbjct: 365 GETKDGRFLFDTILEKNMVSWNAMVGGYSLNGHMEEAKYLFNIMPVRNNVSWSAIIAGHL 424
Query: 418 --------IAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLK 469
F ++ G P+ +F S L AC S+ G + ++
Sbjct: 425 DCEQFDEMFEVFNEMILLGEIPNKSTFSSLLCACASTASLDKGKNLHGKIVKLGIQCDTY 484
Query: 470 HYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIEL 529
T + D+ +++G++ + + ++P + V W A++ G G E + + +
Sbjct: 485 VGTALTDMYAKSGDIESSKKVFNRMP-KKNEVSWTAMIQGLAESGLAEESLTLFEEMEKT 543
Query: 530 EPNNTGNYVMLANLFA 545
+ LA LFA
Sbjct: 544 SSIAPNEVMFLAVLFA 559
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 131/276 (47%), Gaps = 13/276 (4%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG D + +F + E++ VSWN++V + NG + EA M +N V
Sbjct: 360 MYCKCGETKDGRFLFDTILEKNMVSWNAMVGGYSLNGHMEEAKYLFNIMPVRNN-----V 414
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SWSA+I G +E + M G PN T SS+L ACA L GK HG I
Sbjct: 415 SWSAIIAGHLDCEQFDEMFEVFNEMILLGEIPNKSTFSSLLCACASTASLDKGKNLHGKI 474
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G + +V L D+Y + GD+ S+ K+F++ KNEVS +I G E+G E+
Sbjct: 475 VKLGIQCDTYVGTALTDMYAKSGDIESSKKVFNRMPKKNEVSWTAMIQGLAESGLAEESL 534
Query: 181 ELFDQMEHL-GVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
LF++ME + + + +++ + L D+ F + G++P F V+
Sbjct: 535 TLFEEMEKTSSIAPNEVMFLAVLFACSHSGLVDKGLWYFNSMEAVYGLKPKGRHFTCVV- 593
Query: 240 ACADMNSLRKGK--EIHALAIALGLQSDTFVGGALV 273
DM S R G+ E ++ Q +T AL+
Sbjct: 594 ---DMLS-RAGRLFEAEEFIYSMPFQPETNAWAALL 625
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/375 (20%), Positives = 145/375 (38%), Gaps = 94/375 (25%)
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQ--------------- 280
S+L + +R G +HA G+ S+ ++ L+ MY Y+
Sbjct: 26 SLLKNLTNQGLIRDGSALHAHLFKTGISSEQYISIKLLIMYLNYRKSAEADQISKDFDGF 85
Query: 281 DLVA----------------AQMAFDEIENIENL-----------LGKMKE--------- 304
DLV A+ FDE+ + G+++E
Sbjct: 86 DLVVHNCMISANVQRGNLDEARKLFDEMPQTNEISWTALISGFMKYGRVRESMWYFERNP 145
Query: 305 -----------DGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ 353
G+ N ++ AM+LF ++L ++ P+ T ++ AC++L G
Sbjct: 146 FQNVVSWTAAISGYVQNGFSVEAMKLFIKLLESEVKPNKVTFTSVVRACANLGDFGLGMS 205
Query: 354 VHAYAIRCGYDSD----------------VHIG---------------TALVDMYAKCGS 382
V ++ GY+ D +H+ TA++D+Y +
Sbjct: 206 VLGLIVKTGYEHDLAVSNSLITLCLRMGEIHLAREVFDRMEEKDVVSWTAILDLYVEMDE 265
Query: 383 LKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSA 442
L AR + + + VS +AM+ Y G+ +E + F R++ GF+P+ F S LSA
Sbjct: 266 LGEARRIFDEMPQRNEVSWSAMIARYCQSGYPEESLRLFCRMIQEGFKPNISCFSSILSA 325
Query: 443 CVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVM 502
+++ G + + + + ++D+ + GE + F+ + + V
Sbjct: 326 LASVEALQAGMNIHGHVTKIGFEKDVFVSSSLIDMYCKCGETKDG-RFLFDTILEKNMVS 384
Query: 503 WGALLGGCVSHGNLE 517
W A++GG +G++E
Sbjct: 385 WNAMVGGYSLNGHME 399
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 37/185 (20%), Positives = 77/185 (41%), Gaps = 11/185 (5%)
Query: 338 ILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPD 397
+L ++ + G +HA+ + G S+ +I L+ MY A K D
Sbjct: 27 LLKNLTNQGLIRDGSALHAHLFKTGISSEQYISIKLLIMYLNYRKSAEADQISKDFDGFD 86
Query: 398 LVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFD 457
LV N M++A G+ E R++ + + IS+ + +S + G ++ +F+
Sbjct: 87 LVVHNCMISANVQRGNLDEA----RKLFDEMPQTNEISWTALISGFMKYGRVRESMWYFE 142
Query: 458 LMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKI---PMAPDSVMWGALLGGCVSHG 514
+ +V +T + + G EA + K+ + P+ V + +++ C + G
Sbjct: 143 RNPFQNVVS----WTAAISGYVQNGFSVEAMKLFIKLLESEVKPNKVTFTSVVRACANLG 198
Query: 515 NLEFG 519
+ G
Sbjct: 199 DFGLG 203
>gi|125537719|gb|EAY84114.1| hypothetical protein OsI_05496 [Oryza sativa Indica Group]
Length = 751
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 211/599 (35%), Positives = 339/599 (56%), Gaps = 14/599 (2%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y K G L A++VF MP+ + + N++++A A + LV + M D VS
Sbjct: 58 YAKSGRLARARRVFDEMPDPNLFTRNALLSALAHSRLVPDMERLFASMPERDA-----VS 112
Query: 62 WSAVIGGFTQNGYDEEAIGMLFR--MQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
++A+I GF+ G ++ L+R ++ E + P TLS+++ + L +LG H
Sbjct: 113 YNALITGFSSTGSPARSV-QLYRALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQ 171
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ R GF + FV + LVD+Y + G + A ++F + K V NT+I G + +A
Sbjct: 172 VLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDA 231
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
+ LF M V R I+W +M++G N L EA +FR + +G+ +TFGS+L
Sbjct: 232 KGLFQLM----VDRDSITWTTMVTGLTQNGLQLEALDVFRRM-RAEGVGIDQYTFGSILT 286
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
AC + + +GK+IHA + + FVG ALV+MY + + + A+ F + +
Sbjct: 287 ACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIIS 346
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
G+ N + A++ FSEM + PD +T+G ++S+C++LA++E G Q H A+
Sbjct: 347 WTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLAL 406
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
G + + ALV +Y KCGS++ A + +S D VS A++T YA G KE I
Sbjct: 407 VSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETID 466
Query: 420 HFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLL 478
F ++L +G +PD ++F+ LSAC AG ++ G ++FD M +D+ P HYTCM+DL
Sbjct: 467 LFEKMLVNGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHDIVPIDDHYTCMIDLY 526
Query: 479 SRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYV 538
SR+G EA EFIK++P +PD+ W LL C GN+E G+ AA+ L+E +P N +YV
Sbjct: 527 SRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDPQNPASYV 586
Query: 539 MLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
+L ++ A G+W+++A R+ M+DR++ K PGCSWI+ ++++H F A D+SH S IY
Sbjct: 587 LLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSSRIY 645
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 123/429 (28%), Positives = 198/429 (46%), Gaps = 63/429 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G + DA++VF+ M + V +N+++T ++ +A + M D+ +
Sbjct: 190 MYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDS-----I 244
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+ ++ G TQNG EA+ + RM+AEG+ + T S+L AC L GK+ H YI
Sbjct: 245 TWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYI 304
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
TR + N FV + LVD+Y +C + A +F + + +N +S +IVGY +N EA
Sbjct: 305 TRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAV 364
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
F +M+ DGI+P FT GSV+ +
Sbjct: 365 RAFSEMQ------------------------------------MDGIKPDDFTLGSVISS 388
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA++ SL +G + H LA+ GL V ALV +Y + + A FDE+ + +
Sbjct: 389 CANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSW 448
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G+ + LF +ML L PD T +LSACS +E+G
Sbjct: 449 TALVTGYAQFGKAKETIDLFEKMLVNGLKPDGVTFIGVLSACSRAGLVEKG--------- 499
Query: 361 CGY------DSDV-----HIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNAMLTAY 408
C Y D D+ H T ++D+Y++ G K A K++ +PD +L++
Sbjct: 500 CDYFDSMQKDHDIVPIDDHY-TCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSC 558
Query: 409 AMHGHGKEG 417
+ G+ + G
Sbjct: 559 RLRGNMEIG 567
>gi|15227144|ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070
gi|4587589|gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana]
gi|330252165|gb|AEC07259.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 786
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 221/632 (34%), Positives = 338/632 (53%), Gaps = 44/632 (6%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y K G A+K+F MP R SWN+V++A + G + E +++ D+ V
Sbjct: 58 VYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDS-----V 112
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ +I G+ G +AI ++ M EG+EP TL++VL + A + + GK+ H +I
Sbjct: 113 SWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFI 172
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G N V N L+++Y +CGD + A +F + +++ S N +I + + G + A
Sbjct: 173 VKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAM 232
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
F+QM +R I++WNSMISG+ A +F +L + P FT SVL A
Sbjct: 233 AQFEQM----AERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSA 288
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCR---------------------- 278
CA++ L GK+IH+ + G V AL+ MY R
Sbjct: 289 CANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIE 348
Query: 279 -YQDLVAAQMAFDEIENIENLLGKMKED----------GFEPNVYTWNAMQLFSEMLSLD 327
+ L+ + ++ +N+ +K+ G+E + A+ LF M+
Sbjct: 349 GFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGG 408
Query: 328 LTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHAR 387
P+ YT+ +LS SSLA++ GKQ+H A++ G V + AL+ MYAK G++ A
Sbjct: 409 QRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSAS 468
Query: 388 LAYKRISTP-DLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHA 446
A+ I D VS +M+ A A HGH +E + F +L G RPDHI+++ SAC HA
Sbjct: 469 RAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHA 528
Query: 447 GSIKTGSEFFDLMAYYD-VKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGA 505
G + G ++FD+M D + P+L HY CMVDL RAG L EA EFI+K+P+ PD V WG+
Sbjct: 529 GLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGS 588
Query: 506 LLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRM 565
LL C H N++ G++AA+RL+ LEP N+G Y LANL++ G+W + A+ R+ MKD R+
Sbjct: 589 LLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRV 648
Query: 566 HKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
K G SWIE + ++H F D +H EIY
Sbjct: 649 KKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIY 680
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 136/512 (26%), Positives = 238/512 (46%), Gaps = 104/512 (20%)
Query: 92 PNARTLSSVLPACARLQKLSLGKE--------FHGYITRNGFMSNPFVVNGLVDVYRRCG 143
P +LS++L C L + S+ K H + ++G M + +++N L++VY + G
Sbjct: 4 PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTG 63
Query: 144 DMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMIS 203
L A K+F + ++ S NT++ Y + G++ E FDQ+ QR +SW +MI
Sbjct: 64 YALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLP----QRDSVSWTTMIV 119
Query: 204 GYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQ 263
GY + Y +A + D++ ++GIEPT FT +VL + A + GK++H+ + LGL+
Sbjct: 120 GYKNIGQYHKAIRVMGDMV-KEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLR 178
Query: 264 SDTFVGGALVEMYCRYQDLVAAQMAFDE--IENIENL---------LGKMK------EDG 306
+ V +L+ MY + D + A+ FD + +I + +G+M E
Sbjct: 179 GNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQM 238
Query: 307 FEPNVYTWNAM--------------QLFSEML--SLDLTPDIYTVGIILSACSSLATMER 350
E ++ TWN+M +FS+ML SL L+PD +T+ +LSAC++L +
Sbjct: 239 AERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSL-LSPDRFTLASVLSACANLEKLCI 297
Query: 351 GKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDL------------ 398
GKQ+H++ + G+D + AL+ MY++CG ++ AR ++ T DL
Sbjct: 298 GKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGY 357
Query: 399 ---------------------VSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFL 437
V+ AM+ Y HG E I FR ++ G RP+ + L
Sbjct: 358 IKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYT-L 416
Query: 438 SALSAC------------VHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELG 485
+A+ + +H ++K+G Y V S ++ + ++AG +
Sbjct: 417 AAMLSVASSLASLSHGKQIHGSAVKSGE-------IYSVSVS----NALITMYAKAGNIT 465
Query: 486 EAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
A I D+V W +++ HG+ E
Sbjct: 466 SASRAFDLIRCERDTVSWTSMIIALAQHGHAE 497
>gi|414869547|tpg|DAA48104.1| TPA: hypothetical protein ZEAMMB73_530850 [Zea mays]
Length = 1091
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 207/581 (35%), Positives = 321/581 (55%), Gaps = 43/581 (7%)
Query: 22 DCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGM 81
C N++++ A + ++ +A+ RM D +SW++VI G + NG + EAI +
Sbjct: 451 QCAVCNALISFYAKSNMIGDAVLVFNRMPRQDT-----ISWNSVISGCSSNGLNSEAIEL 505
Query: 82 LFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRR 141
RM +G E ++ TL SVLPACA+ + G+ HGY + G + + N L+D+Y
Sbjct: 506 FIRMWTQGQELDSVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGETSLANALLDMYSN 565
Query: 142 CGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSM 201
C D S +IF KN ++SW +M
Sbjct: 566 CSDWQSTNQIFRSMGQKN-----------------------------------VVSWTAM 590
Query: 202 ISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALG 261
I+ Y+ L+D+ + +++++ DGI P F S L A A SL++GK +H I G
Sbjct: 591 ITSYMRAGLFDKVAGLLQEMVL-DGIRPDVFAVTSALHAFAGDESLKQGKSVHGYTIRNG 649
Query: 262 LQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFS 321
++ V AL+EMY + +++ A++ FD + N + + G+ N + + LFS
Sbjct: 650 MEKLLPVANALMEMYVKCRNVEEARLIFDRVTNKDVISWNTLIGGYSRNNFPNESFSLFS 709
Query: 322 EMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCG 381
+ML L P+ T+ IL A +S++++ERG+++HAYA+R G+ D + ALVDMY KCG
Sbjct: 710 DML-LQFRPNAVTMTCILPAAASISSLERGREIHAYALRRGFLEDSYASNALVDMYVKCG 768
Query: 382 SLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALS 441
+L AR+ + R++ +L+S M+ Y MHG GK IA F ++ SG PD SF + L
Sbjct: 769 ALLVARVLFDRLTKKNLISWTIMIAGYGMHGFGKHAIALFEQMRGSGIEPDAASFSAILY 828
Query: 442 ACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDS 500
AC H+G G FF M Y ++P LKHYTC+VDLLSR G+L EA EFI+ +P+ PDS
Sbjct: 829 ACCHSGLAAEGRRFFKAMQKEYKIEPKLKHYTCIVDLLSRTGDLKEALEFIESMPIEPDS 888
Query: 501 VMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKM 560
+W +LL GC H N++ + AD++ +LEP NTG YV+LAN++A A RW + + + K+
Sbjct: 889 SIWVSLLHGCRIHKNVKLAEKVADKVFKLEPENTGYYVLLANIYAEAERWEAVKKLKNKI 948
Query: 561 KDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
R + ++ G SWIE R ++H F A +R+H I +D
Sbjct: 949 GGRGLRENTGYSWIEVRSKVHVFIADNRNHPDWNRIAEFLD 989
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 132/560 (23%), Positives = 231/560 (41%), Gaps = 69/560 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y +CG ++DA +VF M RD +S
Sbjct: 248 VYSRCGRMEDAARVFDSMHPRDAIS----------------------------------- 272
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
W+++IGG NG+ A+ + +M ++G E ++ T+ SVLPACA L +GK HGY
Sbjct: 273 -WNSMIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLGYGLIGKAVHGYS 331
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
++G + GL V + I + + ++ Y + G++A AR
Sbjct: 332 VKSGLLW------GLDSV---------------QSGIDDAALGSKLVFMYVKCGDMASAR 370
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+FD M G + WN ++ GY ++E+ S+F + GI P +L
Sbjct: 371 RVFDAMSSKG---NVHVWNLIMGGYAKVGEFEESLSLFVQM-HELGIAPDEHAISCLLKC 426
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
++ R G H + LG + V AL+ Y + + A + F+ + + +
Sbjct: 427 ITCLSCARDGLVAHGYIVKLGFGAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQDTISW 486
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G N A++LF M + D T+ +L AC+ G+ VH Y+++
Sbjct: 487 NSVISGCSSNGLNSEAIELFIRMWTQGQELDSVTLLSVLPACAQSRYWFAGRVVHGYSVK 546
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
G + + AL+DMY+ C + ++ + ++VS AM+T+Y G +
Sbjct: 547 TGLIGETSLANALLDMYSNCSDWQSTNQIFRSMGQKNVVSWTAMITSYMRAGLFDKVAGL 606
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSR 480
+ ++ G RPD + SAL A S+K G ++ L ++++ +
Sbjct: 607 LQEMVLDGIRPDVFAVTSALHAFAGDESLKQGKSVHGYTIRNGMEKLLPVANALMEMYVK 666
Query: 481 AGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNL--EFGQIAADRLIELEPNNTGNYV 538
+ EA ++ D + W L+GG S N E + +D L++ PN V
Sbjct: 667 CRNVEEARLIFDRV-TNKDVISWNTLIGG-YSRNNFPNESFSLFSDMLLQFRPNA----V 720
Query: 539 MLANLFAYAGRWSDLARTRQ 558
+ + A S L R R+
Sbjct: 721 TMTCILPAAASISSLERGRE 740
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 124/479 (25%), Positives = 201/479 (41%), Gaps = 104/479 (21%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y KCG L +A+ VF MP + ++
Sbjct: 146 YLKCGDLGEARTVFDGMPP----------------------------------QAADVRV 171
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W++++ + + G +EA+ + +MQ G+ P+A +S VL + L L+ G+ HG +
Sbjct: 172 WTSLMSAYAKAGDFQEAVSLFRQMQCCGVSPDAHAVSCVLKCVSSLGSLTEGEVIHGLLE 231
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
+ G V N L+ VY RCG M A ++F ++ +S N++I G NG A +
Sbjct: 232 KLGLGQACAVANALIAVYSRCGRMEDAARVFDSMHPRDAISWNSMIGGCFSNGWHGTAVD 291
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
LF +M W+ G E +S T SVL AC
Sbjct: 292 LFSKM-----------WS-------------------------QGTEISSVTVLSVLPAC 315
Query: 242 ADMNSLRKGKEIHALAIALGL-------QS---DTFVGGALVEMYCRYQDLVAAQMAFDE 291
A + GK +H ++ GL QS D +G LV MY + D+ +A+ FD
Sbjct: 316 AGLGYGLIGKAVHGYSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDA 375
Query: 292 IE-----NIENLL--GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSS 344
+ ++ NL+ G K FE ++ LF +M L + PD + + +L +
Sbjct: 376 MSSKGNVHVWNLIMGGYAKVGEFE------ESLSLFVQMHELGIAPDEHAISCLLKCITC 429
Query: 345 LATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAM 404
L+ G H Y ++ G+ + + AL+ YAK + A L + R+ D +S N++
Sbjct: 430 LSCARDGLVAHGYIVKLGFGAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQDTISWNSV 489
Query: 405 LTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSAC-----------VHAGSIKTG 452
++ + +G E I F R+ G D ++ LS L AC VH S+KTG
Sbjct: 490 ISGCSSNGLNSEAIELFIRMWTQGQELDSVTLLSVLPACAQSRYWFAGRVVHGYSVKTG 548
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 95/388 (24%), Positives = 169/388 (43%), Gaps = 76/388 (19%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY C ++F+ M +++ VSW +++T+
Sbjct: 562 MYSNCSDWQSTNQIFRSMGQKNVVSWTAMITS---------------------------- 593
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+ + G ++ G+L M +G+ P+ ++S L A A + L GK HGY
Sbjct: 594 --------YMRAGLFDKVAGLLQEMVLDGIRPDVFAVTSALHAFAGDESLKQGKSVHGYT 645
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
RNG V N L+++Y +C ++ A IF + + K+ +S NT+I GY
Sbjct: 646 IRNGMEKLLPVANALMEMYVKCRNVEEARLIFDRVTNKDVISWNTLIGGYSR-------- 697
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
N+ +E+FS+F D+L++ P + T +L A
Sbjct: 698 ---------------------------NNFPNESFSLFSDMLLQ--FRPNAVTMTCILPA 728
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
A ++SL +G+EIHA A+ G D++ ALV+MY + L+ A++ FD + +
Sbjct: 729 AASISSLERGREIHAYALRRGFLEDSYASNALVDMYVKCGALLVARVLFDRLTKKNLISW 788
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
+ G+ + + +A+ LF +M + PD + IL AC G++ A++
Sbjct: 789 TIMIAGYGMHGFGKHAIALFEQMRGSGIEPDAASFSAILYACCHSGLAAEGRRFFK-AMQ 847
Query: 361 CGYDSDVHIG--TALVDMYAKCGSLKHA 386
Y + + T +VD+ ++ G LK A
Sbjct: 848 KEYKIEPKLKHYTCIVDLLSRTGDLKEA 875
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 98/369 (26%), Positives = 164/369 (44%), Gaps = 17/369 (4%)
Query: 158 KNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSM 217
K V +++ Y + G++ EAR +FD M + W S++S Y + EA S+
Sbjct: 134 KGSVLGKRLVLAYLKCGDLGEARTVFDGMPPQAAD--VRVWTSLMSAYAKAGDFQEAVSL 191
Query: 218 FRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYC 277
FR + G+ P + VL + + SL +G+ IH L LGL V AL+ +Y
Sbjct: 192 FRQMQC-CGVSPDAHAVSCVLKCVSSLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYS 250
Query: 278 RYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGI 337
R + A FD + + + G N + A+ LFS+M S TV
Sbjct: 251 RCGRMEDAARVFDSMHPRDAISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLS 310
Query: 338 ILSACSSLATMERGKQVHAYAIRC----GYDS------DVHIGTALVDMYAKCGSLKHAR 387
+L AC+ L GK VH Y+++ G DS D +G+ LV MY KCG + AR
Sbjct: 311 VLPACAGLGYGLIGKAVHGYSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVKCGDMASAR 370
Query: 388 LAYKRISTPDLVS-QNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHA 446
+ +S+ V N ++ YA G +E ++ F ++ G PD + +S L C+
Sbjct: 371 RVFDAMSSKGNVHVWNLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHA-ISCLLKCITC 429
Query: 447 GSI-KTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGA 505
S + G + ++ +++ +G+A ++P D++ W +
Sbjct: 430 LSCARDGLVAHGYIVKLGFGAQCAVCNALISFYAKSNMIGDAVLVFNRMPR-QDTISWNS 488
Query: 506 LLGGCVSHG 514
++ GC S+G
Sbjct: 489 VISGCSSNG 497
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 88/201 (43%), Gaps = 11/201 (5%)
Query: 322 EMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAY-----AIRCGYDSDVHIGTALVDM 376
+L D D+ + +++ C ++E K+ HA A G V +G LV
Sbjct: 87 RLLGSDGGVDVRSYCMVVQLCGEERSLEAAKRAHALIRASSAAATGGKGSV-LGKRLVLA 145
Query: 377 YAKCGSLKHARLAYKRI--STPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHI 434
Y KCG L AR + + D+ ++++AYA G +E ++ FR++ G PD
Sbjct: 146 YLKCGDLGEARTVFDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQCCGVSPDAH 205
Query: 435 SFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKI 494
+ L GS+ G L+ + + ++ + SR G + +A
Sbjct: 206 AVSCVLKCVSSLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARVFDS- 264
Query: 495 PMAP-DSVMWGALLGGCVSHG 514
M P D++ W +++GGC S+G
Sbjct: 265 -MHPRDAISWNSMIGGCFSNG 284
>gi|297831842|ref|XP_002883803.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329643|gb|EFH60062.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 697
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 212/640 (33%), Positives = 337/640 (52%), Gaps = 82/640 (12%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y KCGSL+D +++F MP+R+ +WNSVVT G + EA M D T
Sbjct: 65 YAKCGSLEDGRQLFDKMPQRNVFTWNSVVTGLTKLGFLDEADSLFRSMPERDQCT----- 119
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W++++ GF Q+ EEA+ M EG N T +S L AC+ L ++ G + H I
Sbjct: 120 WNSMVSGFAQHDRCEEALYYFAMMHKEGFVLNEYTFASGLSACSGLNDMNRGVQIHSLIA 179
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
++ +S+ ++ + LVD+Y +CG++ A ++F + +N VS N++I Y +NG EA +
Sbjct: 180 KSPCLSDVYIGSALVDMYSKCGNVNDAQQVFDEMGDRNVVSWNSLITCYEQNGPAVEALK 239
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
+F M + SW +EP T SV+ AC
Sbjct: 240 VFQVM--------LESW----------------------------VEPDEVTLASVISAC 263
Query: 242 ADMNSLRKGKEIHALAIAL-GLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
A +++++ G+E+HA + + L++D + A V+MY + + A+ FD + I N++
Sbjct: 264 ASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMP-IRNVIA 322
Query: 301 K------------------MKEDGFEPNVYTWN--------------AMQLFSEMLSLDL 328
+ M E NV +WN A+ LF + +
Sbjct: 323 ETSMVSGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESV 382
Query: 329 TPDIYTVGIILSACSSLATMERGKQVHAYAIRCGY------DSDVHIGTALVDMYAKCGS 382
P YT IL AC+ LA + G Q H + ++ G+ + D+ +G +L+DMY KCG
Sbjct: 383 CPTHYTFANILKACADLADLHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGC 442
Query: 383 LKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSA 442
++ L ++++ D VS NAM+ +A +G+G E + FR +L SG +PDHI+ + LSA
Sbjct: 443 VEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLDSGEKPDHITMIGVLSA 502
Query: 443 CVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSV 501
C HAG ++ G +F M + V P HYTCMVDLL RAG L EA I+++P+ PDSV
Sbjct: 503 CGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSIIEEMPVQPDSV 562
Query: 502 MWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMK 561
+WG+LL C H N+ G+ A++L E+E +N+G YV+L+N++A G+W D R+ M+
Sbjct: 563 IWGSLLAACKVHRNITLGKYVAEKLFEVETSNSGPYVLLSNMYAELGKWGDAMNVRKLMR 622
Query: 562 DRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
+ K PGCSWI+ H F D+SH R ++I++++D
Sbjct: 623 KEGVTKQPGCSWIKIPGHAHVFMVKDKSHPRKKQIHSLLD 662
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 125/420 (29%), Positives = 205/420 (48%), Gaps = 50/420 (11%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG+++DA++VF M +R+ VSWNS++T NG +EAL+ + M L
Sbjct: 196 MYSKCGNVNDAQQVFDEMGDRNVVSWNSLITCYEQNGPAVEALKVFQVM---------LE 246
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW +EP+ TL+SV+ ACA L + +G+E H +
Sbjct: 247 SW---------------------------VEPDEVTLASVISACASLSAIKVGQEVHARV 279
Query: 121 TRNGFMSNPFVV-NGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ + N ++ N VD+Y +C + A IF I+N ++ +++ GY + A
Sbjct: 280 VKMDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMVSGYAMAASTKAA 339
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
R +F +M +R ++SWN++I+GY N +EA S+F LL R+ + PT +TF ++L
Sbjct: 340 RLMFTKM----AERNVVSWNALIAGYTQNGENEEALSLFC-LLKRESVCPTHYTFANILK 394
Query: 240 ACADMNSLRKGKEIHALAIALGL------QSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
ACAD+ L G + H + G + D FVG +L++MY + + + F ++
Sbjct: 395 ACADLADLHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMM 454
Query: 294 NIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ 353
+ + GF N Y A++LF EML PD T+ +LSAC +E G+
Sbjct: 455 ERDCVSWNAMIIGFAQNGYGNEALELFREMLDSGEKPDHITMIGVLSACGHAGFVEEGRH 514
Query: 354 VHAYAIR-CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST-PDLVSQNAMLTAYAMH 411
+ R G T +VD+ + G L+ A+ + + PD V ++L A +H
Sbjct: 515 YFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSIIEEMPVQPDSVIWGSLLAACKVH 574
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 123/465 (26%), Positives = 221/465 (47%), Gaps = 61/465 (13%)
Query: 97 LSSVLPACARLQKLSLG-KEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKF 155
+ +L +C +L+ ++ + H + ++GF + F+ N L+D Y +CG + ++F K
Sbjct: 22 FAKLLDSCIKLKLSAIDVRCVHASVIKSGFSNEVFIQNRLIDAYAKCGSLEDGRQLFDKM 81
Query: 156 SIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAF 215
+N + N+++ G + G + EA LF M +R +WNSM+SG+ + +EA
Sbjct: 82 PQRNVFTWNSVVTGLTKLGFLDEADSLFRSMP----ERDQCTWNSMVSGFAQHDRCEEAL 137
Query: 216 SMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEM 275
F ++ ++G +TF S L AC+ +N + +G +IH+L SD ++G ALV+M
Sbjct: 138 YYFA-MMHKEGFVLNEYTFASGLSACSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVDM 196
Query: 276 YCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTV 335
Y + ++ AQ FDE+ + + +E N A+++F ML + PD T+
Sbjct: 197 YSKCGNVNDAQQVFDEMGDRNVVSWNSLITCYEQNGPAVEALKVFQVMLESWVEPDEVTL 256
Query: 336 GIILSACSSLATMERGKQVHAYAIRC-GYDSDVHIGTALVDMYAKC-------------- 380
++SAC+SL+ ++ G++VHA ++ +D+ + A VDMYAKC
Sbjct: 257 ASVISACASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMP 316
Query: 381 -----------------GSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRR 423
S K ARL + +++ ++VS NA++ Y +G +E ++ F
Sbjct: 317 IRNVIAETSMVSGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCL 376
Query: 424 ILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKH------------- 470
+ P H +F + L AC + G + A+ V LKH
Sbjct: 377 LKRESVCPTHYTFANILKACADLADLHLG-----MQAHVHV---LKHGFKFQSGEEDDIF 428
Query: 471 -YTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
++D+ + G + E Y +K+ M D V W A++ G +G
Sbjct: 429 VGNSLIDMYVKCGCVEEGYLVFRKM-MERDCVSWNAMIIGFAQNG 472
>gi|147859209|emb|CAN83551.1| hypothetical protein VITISV_001173 [Vitis vinifera]
Length = 728
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 211/629 (33%), Positives = 343/629 (54%), Gaps = 43/629 (6%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y + G+L A+ +F MPER+ VSW+++++ G V E++ ER N N+VS
Sbjct: 97 YVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWYFER-----NPFQNVVS 151
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W+A I GF +NG + EA+ + FR+ G+ PN T +SV+ AC L LG G +
Sbjct: 152 WTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMSILGLVV 211
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
+ GF V N L+ + R G++ A ++F + ++ VS I+ Y E G++ EAR
Sbjct: 212 KAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGDLREARR 271
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
+FD+M +R ISW++MI+ Y + +EA +F ++ ++G +P F L A
Sbjct: 272 IFDEMP----ERNEISWSAMIARYSQSGYAEEALKLFSKMV-QEGFKPNISCFACTLSAL 326
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI--ENI---E 296
A + +L G IH +G+ D F+G +L+++YC+ ++ FD I +N+
Sbjct: 327 ASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVVCWN 386
Query: 297 NLLGKMKEDGF------------EPNVYTW--------------NAMQLFSEMLSLDLTP 330
+++G +G E N +W +++F+ +L TP
Sbjct: 387 SMVGGYSINGRLEEXEELFELIPEKNDXSWGTIJAGYLENEQCEKVLEVFNTLLVSGQTP 446
Query: 331 DIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAY 390
+ T +L AC+S+A++++G VH I+ G D+ +GTAL DMYAKCG + ++ +
Sbjct: 447 NKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSSKQVF 506
Query: 391 KRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRI-LASGFRPDHISFLSALSACVHAGSI 449
+R+ + +S M+ A G E + F + S P+ + LS L AC H G +
Sbjct: 507 ERMPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSVLFACSHCGLV 566
Query: 450 KTGSEFFDLM-AYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLG 508
G +F+ M Y +KP KHYTC+VDLLSR+G L EA EFI+ IP P++ W ALL
Sbjct: 567 DKGLWYFNSMEKVYGIKPKGKHYTCVVDLLSRSGRLYEAEEFIRTIPFQPEANAWAALLS 626
Query: 509 GCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKS 568
GC + + + + A +L +L NN+ YV+L+N++A AGRW D++ R+ M+++ + KS
Sbjct: 627 GCKKYKDEKIAERTAKKLWQLAENNSAGYVLLSNIYASAGRWIDVSNIRKLMREKGLKKS 686
Query: 569 PGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
GCSW+E R+++H F + D SH +S+EIY
Sbjct: 687 GGCSWVEVRNQVHSFYSEDGSHSQSDEIY 715
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 128/544 (23%), Positives = 227/544 (41%), Gaps = 97/544 (17%)
Query: 94 ARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFS 153
A+T S+L + ++ G H ++ + GF S ++ L+ +Y C +I
Sbjct: 21 AQTCVSLLKKFSNQGLITQGNVLHAHLIKTGFSSQRYIAIKLLILYLNCRKFAEIDQIVK 80
Query: 154 KFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHL----------GVQR---------- 193
+F + V N +I Y + GN+ +AR LFD+M G+ +
Sbjct: 81 EFDGSDLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWY 140
Query: 194 -------GIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNS 246
++SW + ISG+V N L EA +F LL G+ P TF SV+ AC ++
Sbjct: 141 FERNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLL-ESGVRPNDVTFTSVVRACGELGD 199
Query: 247 LRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL-------- 298
G I L + G + V +L+ + R ++ A+ FD +E + +
Sbjct: 200 FGLGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDA 259
Query: 299 ---LGKMKE------DGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTV 335
G ++E + E N +W+AM +LFS+M+ P+I
Sbjct: 260 YVETGDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCF 319
Query: 336 GIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST 395
LSA +SL + G +H + + G D DV IG++L+D+Y KCG RL + I
Sbjct: 320 ACTLSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILE 379
Query: 396 PDLVSQNAMLTAYAMHGHG-------------------------------KEGIAHFRRI 424
++V N+M+ Y+++G ++ + F +
Sbjct: 380 KNVVCWNSMVGGYSINGRLEEXEELFELIPEKNDXSWGTIJAGYLENEQCEKVLEVFNTL 439
Query: 425 LASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGEL 484
L SG P+ +F S L AC S+ G + ++ + T + D+ ++ G++
Sbjct: 440 LVSGQTPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDI 499
Query: 485 GEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQI---AADRLIELEPNNTGNYVMLA 541
G + + +++P + + W ++ G G I +R E+ PN ++L+
Sbjct: 500 GSSKQVFERMP-EKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPN---ELMLLS 555
Query: 542 NLFA 545
LFA
Sbjct: 556 VLFA 559
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 99/188 (52%), Gaps = 5/188 (2%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KCG DD + VF ++ E++ V WNS+V + NG + E E E + N
Sbjct: 360 LYCKCGKPDDGRLVFDLILEKNVVCWNSMVGGYSINGRLEEXEELFELIPE-----KNDX 414
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW +J G+ +N E+ + + + G PN T SSVL ACA + L G HG I
Sbjct: 415 SWGTIJAGYLENEQCEKVLEVFNTLLVSGQTPNKSTFSSVLCACASIASLDKGMNVHGKI 474
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G + FV L D+Y +CGD+ S+ ++F + KNE+S +I G E+G E+
Sbjct: 475 IKLGIQYDIFVGTALTDMYAKCGDIGSSKQVFERMPEKNEISWTVMIQGLAESGFAVESL 534
Query: 181 ELFDQMEH 188
LF++ME
Sbjct: 535 ILFEEMER 542
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 59/117 (50%), Gaps = 1/117 (0%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG + +K+VF+ MPE++ +SW ++ A +G +E+L E M PN +
Sbjct: 492 MYAKCGDIGSSKQVFERMPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNEL 551
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQ-AEGLEPNARTLSSVLPACARLQKLSLGKEF 116
+V+ + G ++ + M+ G++P + + V+ +R +L +EF
Sbjct: 552 MLLSVLFACSHCGLVDKGLWYFNSMEKVYGIKPKGKHYTCVVDLLSRSGRLYEAEEF 608
>gi|296087629|emb|CBI34885.3| unnamed protein product [Vitis vinifera]
Length = 728
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 211/629 (33%), Positives = 342/629 (54%), Gaps = 43/629 (6%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y + G+L A+ +F MPER+ VSW+++++ G V E++ ER N N+VS
Sbjct: 97 YVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWYFER-----NPFQNVVS 151
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W+A I GF +NG + EA+ + FR+ G+ PN T +SV+ AC L LG G +
Sbjct: 152 WTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMSILGLVV 211
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
+ GF V N L+ + R G++ A ++F + ++ VS I+ Y E G++ EAR
Sbjct: 212 KAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGDLREARR 271
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
+FD+M +R ISW++MI+ Y + +EA +F ++ ++G +P F L A
Sbjct: 272 IFDEMP----ERNEISWSAMIARYSQSGYAEEALKLFSKMV-QEGFKPNISCFACTLSAL 326
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI--ENI---E 296
A + +L G IH +G+ D F+G +L+++YC+ ++ FD I +N+
Sbjct: 327 ASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVVCWN 386
Query: 297 NLLGKMKEDGF------------EPNVYTW--------------NAMQLFSEMLSLDLTP 330
+++G +G E N +W +++F+ +L TP
Sbjct: 387 SMVGGYSINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVFNTLLVSGQTP 446
Query: 331 DIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAY 390
+ T +L AC+S+A++++G VH I+ G D+ +GTAL DMYAKCG + ++ +
Sbjct: 447 NKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSSKQVF 506
Query: 391 KRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRI-LASGFRPDHISFLSALSACVHAGSI 449
+R+ + +S M+ A G E + F + S P+ + LS L AC H G +
Sbjct: 507 ERMPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSVLFACSHCGLV 566
Query: 450 KTGSEFFDLM-AYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLG 508
G +F+ M Y +KP KHYTC+VDLLSR+G L EA EFI+ IP P++ W ALL
Sbjct: 567 DKGLWYFNSMEKVYGIKPKGKHYTCVVDLLSRSGRLYEAEEFIRTIPFQPEANAWAALLS 626
Query: 509 GCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKS 568
GC + + + + A +L +L NN+ YV+L+N++A AGRW D++ R+ M+++ + KS
Sbjct: 627 GCKKYKDEKIAERTAKKLWQLAENNSAGYVLLSNIYASAGRWIDVSNIRKLMREKGLKKS 686
Query: 569 PGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
GCSW+E R+++H F + D SH +S EIY
Sbjct: 687 GGCSWVEVRNQVHSFYSEDGSHSQSNEIY 715
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 128/544 (23%), Positives = 227/544 (41%), Gaps = 97/544 (17%)
Query: 94 ARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFS 153
A+T S+L + ++ G H ++ + GF S ++ L+ +Y C +I
Sbjct: 21 AQTCVSLLKKFSNQGLITQGNVLHAHLIKTGFSSQRYIAIKLLILYLNCRKFAEIDQIVK 80
Query: 154 KFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHL----------GVQR---------- 193
+F + V N +I Y + GN+ +AR LFD+M G+ +
Sbjct: 81 EFDGSDLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWY 140
Query: 194 -------GIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNS 246
++SW + ISG+V N L EA +F LL G+ P TF SV+ AC ++
Sbjct: 141 FERNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLL-ESGVRPNDVTFTSVVRACGELGD 199
Query: 247 LRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL-------- 298
G I L + G + V +L+ + R ++ A+ FD +E + +
Sbjct: 200 FGLGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDA 259
Query: 299 ---LGKMKE------DGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTV 335
G ++E + E N +W+AM +LFS+M+ P+I
Sbjct: 260 YVETGDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCF 319
Query: 336 GIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST 395
LSA +SL + G +H + + G D DV IG++L+D+Y KCG RL + I
Sbjct: 320 ACTLSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILE 379
Query: 396 PDLVSQNAMLTAYAMHGHG-------------------------------KEGIAHFRRI 424
++V N+M+ Y+++G ++ + F +
Sbjct: 380 KNVVCWNSMVGGYSINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVFNTL 439
Query: 425 LASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGEL 484
L SG P+ +F S L AC S+ G + ++ + T + D+ ++ G++
Sbjct: 440 LVSGQTPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDI 499
Query: 485 GEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQI---AADRLIELEPNNTGNYVMLA 541
G + + +++P + + W ++ G G I +R E+ PN ++L+
Sbjct: 500 GSSKQVFERMP-EKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPN---ELMLLS 555
Query: 542 NLFA 545
LFA
Sbjct: 556 VLFA 559
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 100/188 (53%), Gaps = 5/188 (2%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KCG DD + VF ++ E++ V WNS+V + NG + E E E + N V
Sbjct: 360 LYCKCGKPDDGRLVFDLILEKNVVCWNSMVGGYSINGRLEETEELFELIPE-----KNDV 414
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW +I G+ +N E+ + + + G PN T SSVL ACA + L G HG I
Sbjct: 415 SWGTIIAGYLENEQCEKVLEVFNTLLVSGQTPNKSTFSSVLCACASIASLDKGMNVHGKI 474
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G + FV L D+Y +CGD+ S+ ++F + KNE+S +I G E+G E+
Sbjct: 475 IKLGIQYDIFVGTALTDMYAKCGDIGSSKQVFERMPEKNEISWTVMIQGLAESGFAVESL 534
Query: 181 ELFDQMEH 188
LF++ME
Sbjct: 535 ILFEEMER 542
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 59/117 (50%), Gaps = 1/117 (0%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG + +K+VF+ MPE++ +SW ++ A +G +E+L E M PN +
Sbjct: 492 MYAKCGDIGSSKQVFERMPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNEL 551
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQ-AEGLEPNARTLSSVLPACARLQKLSLGKEF 116
+V+ + G ++ + M+ G++P + + V+ +R +L +EF
Sbjct: 552 MLLSVLFACSHCGLVDKGLWYFNSMEKVYGIKPKGKHYTCVVDLLSRSGRLYEAEEF 608
>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 207/602 (34%), Positives = 320/602 (53%), Gaps = 73/602 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC +DDA K+F MPERD LV
Sbjct: 191 MYAKCRQIDDAYKMFDRMPERD------------------------------------LV 214
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ +I GF+QNG+ ++A+ ++ RMQ EG P++ TL +VLPA A + L +GK HGY
Sbjct: 215 SWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYA 274
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R GF + L D+Y +CG +V AR
Sbjct: 275 IRAGFAKLVNISTALADMYSKCG-------------------------------SVETAR 303
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+FD M+ Q+ ++SWNSM+ GYV N ++A ++F +L +GI+PT T L A
Sbjct: 304 LIFDGMD----QKTVVSWNSMMDGYVQNGEPEKAIAVFEKML-EEGIDPTGVTIMEALHA 358
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CAD+ L +GK +H L L SD V +L+ MY + + + A F+ + ++
Sbjct: 359 CADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSW 418
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G+ N A+ FSEM SL + PD +T+ ++ A + L+ K +H IR
Sbjct: 419 NAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIR 478
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
D ++ + TALVDMY+KCG++ AR + IS +++ NAM+ Y HG G+ +
Sbjct: 479 SCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDL 538
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLS 479
F ++ P+ I++LS +SAC H+G + G F M Y ++PS+ HY MVDLL
Sbjct: 539 FDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLG 598
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
RAG + EA++FI+ +P++P ++GA+LG C H N+E G+ AA +L EL P+ G +V+
Sbjct: 599 RAGRIKEAWDFIENMPISPGITVYGAMLGACKIHKNIEVGEKAAKKLFELNPDEGGYHVL 658
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTI 599
LAN++A +WS +A R+ M+ + + K+PGCS +E R+E+H F + +H +S+ IY
Sbjct: 659 LANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQSKRIYAF 718
Query: 600 ID 601
++
Sbjct: 719 LE 720
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 132/505 (26%), Positives = 226/505 (44%), Gaps = 46/505 (9%)
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
+ ++ G+ +N E A+ L RM+ + ++P + +L C L GKE HG +
Sbjct: 115 YHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLI 174
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
N F +N F + G+V++Y +C + A K+F + ++ VS NTII G+ +NG +A E
Sbjct: 175 TNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALE 234
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
L +M+ DE G P S T +VL A
Sbjct: 235 LVLRMQ------------------------DE------------GQRPDSITLVTVLPAA 258
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK 301
AD+ L GK IH AI G + AL +MY + + A++ FD ++ +
Sbjct: 259 ADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWN 318
Query: 302 MKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRC 361
DG+ N A+ +F +ML + P T+ L AC+ L +ERGK VH + +
Sbjct: 319 SMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQL 378
Query: 362 GYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHF 421
SD+ + +L+ MY+KC + A + ++ VS NAM+ YA +G E + F
Sbjct: 379 NLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCF 438
Query: 422 RRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRA 481
+ + G +PD + +S + A + L+ + ++ T +VD+ S+
Sbjct: 439 SEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKC 498
Query: 482 GELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIEL-----EPNNTGN 536
G + A + I + W A++ G +HG G+ A D ++ EPN+
Sbjct: 499 GAIHMARKLFDMIS-DRHVITWNAMIDGYGTHG---LGRAALDLFDKMKKGAVEPNDI-T 553
Query: 537 YVMLANLFAYAGRWSDLARTRQKMK 561
Y+ + + +++G + R + MK
Sbjct: 554 YLSVISACSHSGLVDEGLRHFKSMK 578
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 130/297 (43%), Gaps = 1/297 (0%)
Query: 245 NSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKE 304
S+++ +I L I GL ++ LV ++ +Y + A F+ I++ + L
Sbjct: 60 TSMKELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTML 119
Query: 305 DGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYD 364
G+ N A+ M D+ P +Y +L C A ++RGK++H I +
Sbjct: 120 KGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFA 179
Query: 365 SDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRI 424
++V T +V+MYAKC + A + R+ DLVS N ++ ++ +G K+ + R+
Sbjct: 180 ANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRM 239
Query: 425 LASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGEL 484
G RPD I+ ++ L A G + G + T + D+ S+ G +
Sbjct: 240 QDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSV 299
Query: 485 GEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLA 541
A + V W +++ G V +G E ++++E + TG +M A
Sbjct: 300 ETARLIFDGMDQKT-VVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEA 355
>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 738
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 205/549 (37%), Positives = 317/549 (57%), Gaps = 7/549 (1%)
Query: 55 ETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGK 114
E PN W+ +I G + + AI RM G+EPN+ T +L +CA++ GK
Sbjct: 93 EQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGK 152
Query: 115 EFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
+ HG++ + G S+PFV L+++Y + G++ A +FSK S+++ VS +I GY G
Sbjct: 153 QIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRG 212
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTF 234
+ +AR LF+++ R +SWN+MI+GY + ++EA + F+++ R + P T
Sbjct: 213 CLDDARRLFEEIP----VRDAVSWNAMIAGYAQSGRFEEALAFFQEM-KRANVAPNESTM 267
Query: 235 GSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIEN 294
+VL ACA SL G + + GL S+ + AL++MY + DL A+ F+ I
Sbjct: 268 VTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICE 327
Query: 295 IENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV 354
+ + + G+ A+ LF +M ++ P+ T IL AC+ L ++ GK +
Sbjct: 328 KDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWI 387
Query: 355 HAYAIRCGYD-SDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGH 413
HAY + ++ + T+L+DMYAKCG+++ A+ + + L S NAM++ AMHGH
Sbjct: 388 HAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGH 447
Query: 414 GKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYT 472
+ FR++ GF PD I+F+ LSAC HAG ++ G + F M YD+ P L+HY
Sbjct: 448 ANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYG 507
Query: 473 CMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPN 532
CM+DLL RAG EA +K + M PD +WG+LLG C HGN+E G+ AA L ELEP
Sbjct: 508 CMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPE 567
Query: 533 NTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDR 592
N G YV+L+N++A AGRW D+AR R K+ D+ M K PGCS IE +H+F D+ H++
Sbjct: 568 NPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKKVPGCSSIEVDSVVHEFLVGDKVHEQ 627
Query: 593 SEEIYTIID 601
S++IY ++D
Sbjct: 628 SQDIYKMLD 636
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 119/455 (26%), Positives = 206/455 (45%), Gaps = 82/455 (18%)
Query: 99 SVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVD--VYRRCGDMLSALKIFSKFS 156
++L C Q L K+ H I + G + F ++ L++ G++ AL +F
Sbjct: 37 TLLSTCKSFQNL---KQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIE 93
Query: 157 IKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFS 216
N+ NT+I G NS+ S V A
Sbjct: 94 QPNQFIWNTMIRG-----------------------------NSLSSSPVG------AID 118
Query: 217 MFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMY 276
+ +L+ G+EP S+TF +L +CA + + ++GK+IH + LGL+SD FV +L+ MY
Sbjct: 119 FYVRMLLC-GVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMY 177
Query: 277 CRYQDLVAAQMAF------DEIENIENLLG-----------KMKEDGFEPNVYTWNAM-- 317
+ +L A++ F D + + G ++ E+ + +WNAM
Sbjct: 178 AQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIA 237
Query: 318 ------------QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDS 365
F EM ++ P+ T+ +LSAC+ ++E G V ++ G S
Sbjct: 238 GYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGS 297
Query: 366 DVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRIL 425
++ + AL+DMY+KCG L AR ++ I D++S N M+ Y+ KE +A FR++
Sbjct: 298 NLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQ 357
Query: 426 ASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVK----PSLKHYTCMVDLLSRA 481
S P+ ++F+S L AC + G++ G + AY D K + +T ++D+ ++
Sbjct: 358 QSNVEPNDVTFVSILPACAYLGALDLGKW---IHAYIDKKFLGLTNTSLWTSLIDMYAKC 414
Query: 482 GELGEAYEFIKKIPMAPDSV-MWGALLGGCVSHGN 515
G + A + M P S+ W A++ G HG+
Sbjct: 415 GNIEAAKQVFAG--MKPKSLGSWNAMISGLAMHGH 447
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 126/442 (28%), Positives = 195/442 (44%), Gaps = 88/442 (19%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETP--N 58
MY + G L A+ VF RD VS+ +++T G CL+ L E P +
Sbjct: 176 MYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRG-------CLDDARRLFEEIPVRD 228
Query: 59 LVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHG 118
VSW+A+I G+ Q+G EEA+ M+ + PN T+ +VL ACA+ L LG
Sbjct: 229 AVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRS 288
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
+I +G SN +VN L+D+Y +CGD+ A +F K+ +S N +I GY + E
Sbjct: 289 WIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKE 348
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
A LF +M+ + +EP TF S+L
Sbjct: 349 ALALFRKMQ------------------------------------QSNVEPNDVTFVSIL 372
Query: 239 IACADMNSLRKGKEIHALAIA--LGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
ACA + +L GK IHA LGL ++T + +L++MY + ++ AA+ F
Sbjct: 373 PACAYLGALDLGKWIHAYIDKKFLGL-TNTSLWTSLIDMYAKCGNIEAAKQVF------- 424
Query: 297 NLLGKMKEDGFEP-NVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSA 341
G +P ++ +WNAM +LF +M PD T +LSA
Sbjct: 425 --------AGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSA 476
Query: 342 CSSLATMERGKQVHAYAIRCGYDSDV-----HIGTALVDMYAKCGSLKHARLAYKRIS-T 395
CS +E G+Q + + D D+ H G ++D+ + G A K +
Sbjct: 477 CSHAGLVELGRQCFSSMVE---DYDISPKLQHYG-CMIDLLGRAGLFDEAEALMKNMEMK 532
Query: 396 PDLVSQNAMLTAYAMHGHGKEG 417
PD ++L A +HG+ + G
Sbjct: 533 PDGAIWGSLLGACRVHGNVELG 554
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 103/227 (45%), Gaps = 11/227 (4%)
Query: 338 ILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYA--KCGSLKHARLAYKRIST 395
+LS C S + KQ+H+ I+ G + + L++ A G+L +A L ++ I
Sbjct: 38 LLSTCKSFQNL---KQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQ 94
Query: 396 PDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEF 455
P+ N M+ ++ I + R+L G P+ +F L +C G+ + G +
Sbjct: 95 PNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQI 154
Query: 456 FDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
+ ++ +T ++++ ++ GELG A E + D+V + AL+ G G
Sbjct: 155 HGHVLKLGLESDPFVHTSLINMYAQNGELGYA-ELVFSKSSLRDAVSFTALITGYTLRGC 213
Query: 516 LEFGQIAADRLIELEP-NNTGNYVMLANLFAYAGRWSDLARTRQKMK 561
L+ A RL E P + ++ + +A +GR+ + Q+MK
Sbjct: 214 LD----DARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMK 256
>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
Length = 871
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 217/619 (35%), Positives = 336/619 (54%), Gaps = 58/619 (9%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYG+CG+ ++A++VF M ER +LV
Sbjct: 189 MYGRCGAWENARQVFDEMRERG---------------------------------VGDLV 215
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
SW++++ + Q G A+ M RM + G+ P+A +L +VLPACA + S GK+ HGY
Sbjct: 216 SWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGY 275
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
R+G + FV N +VD+Y +CG M A K+F + +K+ VS N ++ GY + G +A
Sbjct: 276 ALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDA 335
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
LF+++ ++ +++W+++I+GY L EA +FR +L+ G EP T S+L
Sbjct: 336 LGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMLL-CGSEPNVVTLVSLLS 394
Query: 240 ACADMNSLRKGKEIHALAIALGLQ-------SDTFVGGALVEMYCRYQDLVAAQMAFDEI 292
CA +L GKE H AI L D V AL++MY + + AA+ FD I
Sbjct: 395 GCASAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLI 454
Query: 293 ENIEN-------LLGKMKEDGFEPNVYTWNAMQLFSEMLSLD--LTPDIYTVGIILSACS 343
+ L+G + G E N A++LFS+ML D + P+ +T+ L AC+
Sbjct: 455 PPKDRSVVTWTVLIGGNAQHG-EAN----EALELFSQMLQPDNFVMPNAFTISCALMACA 509
Query: 344 SLATMERGKQVHAYAIRCGYDSD-VHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQN 402
L + G+Q+HAY +R ++S + + L+DMY+K G + AR+ + + + VS
Sbjct: 510 RLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWT 569
Query: 403 AMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY- 461
+++T Y MHG G+E + F + PD ++F+ L AC H+G + G +F+ M
Sbjct: 570 SLMTGYGMHGRGEEALQIFYEMQKVXLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKD 629
Query: 462 YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQI 521
+ V P +HY CMVDLLSRAG L EA E I+ +PM P +W ALL C + N+E G+
Sbjct: 630 FGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEY 689
Query: 522 AADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIH 581
AA++L+ELE N G+Y +L+N++A A W D+AR R MK+ + K PGCSW++ R
Sbjct: 690 AANQLLELESGNDGSYTLLSNIYANARCWKDVARIRYLMKNTGIKKRPGCSWVQGRKGTA 749
Query: 582 KFRASDRSHDRSEEIYTII 600
F A D SH S++IY ++
Sbjct: 750 TFFAGDWSHPMSQQIYDLL 768
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 138/527 (26%), Positives = 234/527 (44%), Gaps = 89/527 (16%)
Query: 41 EALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSV 100
+AL L R L + + W+ +I G+ E+ + + RMQ G P+ T V
Sbjct: 95 KALSVLRR---LHPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFV 151
Query: 101 LPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKF---SI 157
L AC + G H + +GF N FV NGLV +Y RCG +A ++F + +
Sbjct: 152 LKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGV 211
Query: 158 KNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSM 217
+ VS N+I+ Y + G+ A ++F++M
Sbjct: 212 GDLVSWNSIVAAYMQGGDSIRAMKMFERMT------------------------------ 241
Query: 218 FRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYC 277
DL GI P + + +VL ACA + + +GK++H A+ GL D FVG A+V+MY
Sbjct: 242 -EDL----GIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYA 296
Query: 278 ---------------RYQDLV---AAQMAFDEIENIENLLG---KMKEDGFEPNVYTWN- 315
+ +D+V A + +I ++ LG K++E+ E NV TW+
Sbjct: 297 KCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSA 356
Query: 316 -------------AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCG 362
A+ +F +ML P++ T+ +LS C+S T+ GK+ H +AI+
Sbjct: 357 VIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHGKETHCHAIKWI 416
Query: 363 YD-------SDVHIGTALVDMYAKCGSLKHARLAYKRISTPD--LVSQNAMLTAYAMHGH 413
+ D+ + AL+DMY+KC S K AR + I D +V+ ++ A HG
Sbjct: 417 LNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGE 476
Query: 414 GKEGIAHFRRILASG--FRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHY 471
E + F ++L P+ + AL AC G+++ G + + + ++
Sbjct: 477 ANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFV 536
Query: 472 -TCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
C++D+ S++G++ A + + V W +L+ G HG E
Sbjct: 537 ANCLIDMYSKSGDVDAARVVFDNMHQR-NGVSWTSLMTGYGMHGRGE 582
>gi|15237421|ref|NP_197188.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174141|sp|Q9LFL5.1|PP390_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g16860
gi|9755687|emb|CAC01699.1| putative protein [Arabidopsis thaliana]
gi|332004967|gb|AED92350.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 216/614 (35%), Positives = 328/614 (53%), Gaps = 51/614 (8%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +C SL DA+KVF M D +V
Sbjct: 171 MYSRCRSLSDARKVFDEMSVWD------------------------------------VV 194
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
SW+++I + + G + A+ M RM E G P+ TL +VLP CA L SLGK+ H +
Sbjct: 195 SWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCF 254
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ + N FV N LVD+Y +CG M A +FS S+K+ VS N ++ GY + G +A
Sbjct: 255 AVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDA 314
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
LF++M+ ++ +++W++ ISGY L EA + R +L GI+P T SVL
Sbjct: 315 VRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQML-SSGIKPNEVTLISVLS 373
Query: 240 ACADMNSLRKGKEIHALAIAL-------GLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI 292
CA + +L GKEIH AI G + V L++MY + + + A+ FD +
Sbjct: 374 GCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSL 433
Query: 293 ENIEN--LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLT--PDIYTVGIILSACSSLATM 348
E + + G+ + A++L SEM D P+ +T+ L AC+SLA +
Sbjct: 434 SPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAAL 493
Query: 349 ERGKQVHAYAIRCGYDS-DVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTA 407
GKQ+HAYA+R ++ + + L+DMYAKCGS+ ARL + + + V+ +++T
Sbjct: 494 RIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTG 553
Query: 408 YAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKP 466
Y MHG+G+E + F + GF+ D ++ L L AC H+G I G E+F+ M + V P
Sbjct: 554 YGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSP 613
Query: 467 SLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRL 526
+HY C+VDLL RAG L A I+++PM P V+W A L C HG +E G+ AA+++
Sbjct: 614 GPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKI 673
Query: 527 IELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRAS 586
EL N+ G+Y +L+NL+A AGRW D+ R R M+ + + K PGCSW+E F
Sbjct: 674 TELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVG 733
Query: 587 DRSHDRSEEIYTII 600
D++H ++EIY ++
Sbjct: 734 DKTHPHAKEIYQVL 747
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 131/562 (23%), Positives = 234/562 (41%), Gaps = 91/562 (16%)
Query: 4 KCGSLDDAKKVFKMMPERDCVSWN---SVVTACAANGLVLEALECLERMSSLDNETPNLV 60
KC ++ K + + + ++ N +++ + G + A+ L R D +
Sbjct: 37 KCKTISQVKLIHQKLLSFGILTLNLTSHLISTYISVGCLSHAVSLLRRFPPSD---AGVY 93
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
W+++I + NG + + + M + P+ T V AC + + G+ H
Sbjct: 94 HWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALS 153
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
GF+SN FV N LV +Y RC + A K+F + S+ + VS N+II Y + G A
Sbjct: 154 LVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVAL 213
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
E+F +M + G P + T +VL
Sbjct: 214 EMFSRMTN-----------------------------------EFGCRPDNITLVNVLPP 238
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCR---------------------Y 279
CA + + GK++H A+ + + FVG LV+MY + +
Sbjct: 239 CASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSW 298
Query: 280 QDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWN--------------AMQLFSEMLS 325
+VA E+ L KM+E+ + +V TW+ A+ + +MLS
Sbjct: 299 NAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLS 358
Query: 326 LDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRC-------GYDSDVHIGTALVDMYA 378
+ P+ T+ +LS C+S+ + GK++H YAI+ G+ + + L+DMYA
Sbjct: 359 SGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYA 418
Query: 379 KCGSLKHARLAYKRISTP--DLVSQNAMLTAYAMHGHGKEGIAHFRRILASG--FRPDHI 434
KC + AR + +S D+V+ M+ Y+ HG + + + RP+
Sbjct: 419 KCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAF 478
Query: 435 SFLSALSACVHAGSIKTGSEF--FDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIK 492
+ AL AC +++ G + + L + P L C++D+ ++ G + +A
Sbjct: 479 TISCALVACASLAALRIGKQIHAYALRNQQNAVP-LFVSNCLIDMYAKCGSISDARLVFD 537
Query: 493 KIPMAPDSVMWGALLGGCVSHG 514
+ MA + V W +L+ G HG
Sbjct: 538 NM-MAKNEVTWTSLMTGYGMHG 558
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 172/371 (46%), Gaps = 55/371 (14%)
Query: 194 GIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEI 253
G+ WNS+I Y DN ++ +F L+ P ++TF V AC +++S+R G+
Sbjct: 91 GVYHWNSLIRSYGDNGCANKCLYLF-GLMHSLSWTPDNYTFPFVFKACGEISSVRCGESA 149
Query: 254 HALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE-----NIENLLGKMKEDGFE 308
HAL++ G S+ FVG ALV MY R + L A+ FDE+ + +++ + G +
Sbjct: 150 HALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLG-K 208
Query: 309 PNVYTWNAMQLFSEMLS-LDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDV 367
P V A+++FS M + PD T+ +L C+SL T GKQ+H +A+ ++
Sbjct: 209 PKV----ALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNM 264
Query: 368 HIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAM----------------------- 404
+G LVDMYAKCG + A + +S D+VS NAM
Sbjct: 265 FVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEE 324
Query: 405 ------------LTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTG 452
++ YA G G E + R++L+SG +P+ ++ +S LS C G++ G
Sbjct: 325 KIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHG 384
Query: 453 SEFFDLMAYYDVKPSLKHY-------TCMVDLLSRAGELGEAYEFIKKI-PMAPDSVMWG 504
E Y + + ++D+ ++ ++ A + P D V W
Sbjct: 385 KEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWT 444
Query: 505 ALLGGCVSHGN 515
++GG HG+
Sbjct: 445 VMIGGYSQHGD 455
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 112/229 (48%), Gaps = 19/229 (8%)
Query: 307 FEPN---VYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSSLATME 349
F P+ VY WN++ LF M SL TPD YT + AC ++++
Sbjct: 85 FPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVR 144
Query: 350 RGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYA 409
G+ HA ++ G+ S+V +G ALV MY++C SL AR + +S D+VS N+++ +YA
Sbjct: 145 CGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYA 204
Query: 410 MHGHGKEGIAHFRRILAS-GFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSL 468
G K + F R+ G RPD+I+ ++ L C G+ G + ++ ++
Sbjct: 205 KLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNM 264
Query: 469 KHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
C+VD+ ++ G + EA + + D V W A++ G G E
Sbjct: 265 FVGNCLVDMYAKCGMMDEANTVFSNMSVK-DVVSWNAMVAGYSQIGRFE 312
>gi|49333391|gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 210/617 (34%), Positives = 333/617 (53%), Gaps = 76/617 (12%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERM---SSLDNETP- 57
Y CG L + ++VF M +++ WN +V+ A G E++ CL ++ ++ + P
Sbjct: 144 YATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESI-CLFKIMVEKGIEGKRPE 202
Query: 58 ------------NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACA 105
+++SW+++I G+ NG E +G+ +M G++ + T+ SVL CA
Sbjct: 203 SASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCA 262
Query: 106 RLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNT 165
LSLGK H ++ F N L+D+Y +CGD+ AL++F K
Sbjct: 263 NSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMG--------- 313
Query: 166 IIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRD 225
+R ++SW SMI+GY + D A + + + ++
Sbjct: 314 --------------------------ERNVVSWTSMIAGYTRDGWSDGAIILLQQM-EKE 346
Query: 226 GIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAA 285
G++ S+L ACA SL GK++H A + S+ FV AL++MY + + A
Sbjct: 347 GVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGA 406
Query: 286 QMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSL 345
F + ++ +WN M +L PD T+ IL AC+SL
Sbjct: 407 NSVFSTM--------------VVKDIISWNTM-------VGELKPDSRTMACILPACASL 445
Query: 346 ATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAML 405
+ +ERGK++H Y +R GY SD H+ ALVD+Y KCG L ARL + I + DLVS M+
Sbjct: 446 SALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMI 505
Query: 406 TAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDV 464
Y MHG+G E IA F + +G PD +SF+S L AC H+G ++ G FF +M +++
Sbjct: 506 AGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNI 565
Query: 465 KPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAAD 524
+P L+HY CMVDLLSR G L +AY+FI+ +P+APD+ +WGALL GC + ++E + A+
Sbjct: 566 EPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGCRIYHDIELAEKVAE 625
Query: 525 RLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKF- 583
R+ ELEP NTG YV+LAN++A A + ++ R R+K+ + + K+PGCSWIE + ++ F
Sbjct: 626 RVFELEPENTGYYVLLANIYAEAEKREEVKRMREKIGKKGLRKNPGCSWIEIKGRVNLFV 685
Query: 584 RASDRSHDRSEEIYTII 600
++ SH S++I +++
Sbjct: 686 SGNNSSHPHSKKIESLL 702
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 132/485 (27%), Positives = 212/485 (43%), Gaps = 43/485 (8%)
Query: 48 RMSSLDNETPN--LVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACA 105
R+S+ T + + ++A I F Q G E A+ ++ Q LE +T SVL CA
Sbjct: 53 RISATPTRTIDHQVTDYNAKILHFCQLGDLENAMELVCMCQKSELE--TKTYGSVLQLCA 110
Query: 106 RLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNT 165
L+ L+ GK+ H I N + + LV Y CGD+ ++F KN N
Sbjct: 111 GLKSLTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNF 170
Query: 166 IIVGYCENGNVAEARELFDQMEHLGVQ----------------RGIISWNSMISGYVDNS 209
++ Y + G+ E+ LF M G++ R +ISWNSMISGYV N
Sbjct: 171 MVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNG 230
Query: 210 LYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVG 269
L + +++ +M GI+ T SVL+ CA+ +L GK +H+LAI +
Sbjct: 231 LTERGLGIYKQ-MMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFS 289
Query: 270 GALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLT 329
L++MY + DL A F+++ + G+ + ++ A+ L +M +
Sbjct: 290 NTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVK 349
Query: 330 PDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLA 389
D+ + IL AC+ +++ GK VH Y S++ + AL+DMYAKCGS++ A
Sbjct: 350 LDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSV 409
Query: 390 YKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSI 449
+ + D++S N M+ +PD + L AC ++
Sbjct: 410 FSTMVVKDIISWNTMVGE---------------------LKPDSRTMACILPACASLSAL 448
Query: 450 KTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
+ G E + +VDL + G LG A IP + D V W ++ G
Sbjct: 449 ERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIP-SKDLVSWTVMIAG 507
Query: 510 CVSHG 514
HG
Sbjct: 508 YGMHG 512
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 135/296 (45%), Gaps = 84/296 (28%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG LD A +VF+ M ER+ VSW S
Sbjct: 295 MYSKCGDLDGALRVFEKMGERNVVSWTS-------------------------------- 322
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+I G+T++G+ + AI +L +M+ EG++ + ++S+L ACAR L GK+ H YI
Sbjct: 323 ----MIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYI 378
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTII------------- 167
N SN FV N L+D+Y +CG M A +FS +K+ +S NT++
Sbjct: 379 KANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGELKPDSRTMACI 438
Query: 168 ----------------------VGYCENGNVAEAR-ELFDQMEHLGVQR---------GI 195
GY + +VA A +L+ + LG+ R +
Sbjct: 439 LPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDL 498
Query: 196 ISWNSMISGYVDNSLYDEAFSMFRDLLMRD-GIEPTSFTFGSVLIACADMNSLRKG 250
+SW MI+GY + +EA + F + MRD GIEP +F S+L AC+ L +G
Sbjct: 499 VSWTVMIAGYGMHGYGNEAIATFNE--MRDAGIEPDEVSFISILYACSHSGLLEQG 552
>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Vitis vinifera]
Length = 852
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 217/619 (35%), Positives = 336/619 (54%), Gaps = 58/619 (9%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYG+CG+ ++A++VF M ER +LV
Sbjct: 170 MYGRCGAWENARQVFDEMRERG---------------------------------VGDLV 196
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
SW++++ + Q G A+ M RM + G+ P+A +L +VLPACA + S GK+ HGY
Sbjct: 197 SWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGY 256
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
R+G + FV N +VD+Y +CG M A K+F + +K+ VS N ++ GY + G +A
Sbjct: 257 ALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDA 316
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
LF+++ ++ +++W+++I+GY L EA +FR + + G EP T S+L
Sbjct: 317 LGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMRL-CGSEPNVVTLVSLLS 375
Query: 240 ACADMNSLRKGKEIHALAIALGLQ-------SDTFVGGALVEMYCRYQDLVAAQMAFDEI 292
CA +L GKE H AI L D V AL++MY + + AA+ FD I
Sbjct: 376 GCALAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLI 435
Query: 293 ENIEN-------LLGKMKEDGFEPNVYTWNAMQLFSEMLSLD--LTPDIYTVGIILSACS 343
+ L+G + G E N A++LFS+ML D + P+ +T+ L AC+
Sbjct: 436 PPKDRSVVTWTVLIGGNAQHG-EAN----EALELFSQMLQPDNFVMPNAFTISCALMACA 490
Query: 344 SLATMERGKQVHAYAIRCGYDSD-VHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQN 402
L + G+Q+HAY +R ++S + + L+DMY+K G + AR+ + + + VS
Sbjct: 491 RLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWT 550
Query: 403 AMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY- 461
+++T Y MHG G+E + F + G PD ++F+ L AC H+G + G +F+ M
Sbjct: 551 SLMTGYGMHGRGEEALQIFYEMQKVGLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKD 610
Query: 462 YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQI 521
+ V P +HY CMVDLLSRAG L EA E I+ +PM P +W ALL C + N+E G+
Sbjct: 611 FGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEY 670
Query: 522 AADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIH 581
AA++L+ELE N G+Y +L+N++A A W D+AR R MK+ + K PGCSW++ R
Sbjct: 671 AANQLLELESGNDGSYTLLSNIYANARCWKDVARIRYLMKNTGIKKRPGCSWVQGRKGTA 730
Query: 582 KFRASDRSHDRSEEIYTII 600
F A D SH S++IY ++
Sbjct: 731 TFFAGDWSHPMSQQIYDLL 749
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 136/527 (25%), Positives = 232/527 (44%), Gaps = 89/527 (16%)
Query: 41 EALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSV 100
+AL L R L + + W+ +I G+ E+ + + RMQ G P+ T V
Sbjct: 76 KALSVLRR---LHPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFV 132
Query: 101 LPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKF---SI 157
L AC + G H + +GF N FV NGLV +Y RCG +A ++F + +
Sbjct: 133 LKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGV 192
Query: 158 KNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSM 217
+ VS N+I+ Y + G+ A ++F++M
Sbjct: 193 GDLVSWNSIVAAYMQGGDSIRAMKMFERMT------------------------------ 222
Query: 218 FRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYC 277
DL GI P + + +VL ACA + + +GK++H A+ GL D FVG A+V+MY
Sbjct: 223 -EDL----GIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYA 277
Query: 278 ---------------RYQDLV---AAQMAFDEIENIENLLG---KMKEDGFEPNVYTWN- 315
+ +D+V A + +I ++ LG K++E+ E NV TW+
Sbjct: 278 KCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSA 337
Query: 316 -------------AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCG 362
A+ +F +M P++ T+ +LS C+ T+ GK+ H +AI+
Sbjct: 338 VIAGYAQRGLGFEALDVFRQMRLCGSEPNVVTLVSLLSGCALAGTLLHGKETHCHAIKWI 397
Query: 363 YD-------SDVHIGTALVDMYAKCGSLKHARLAYKRISTPD--LVSQNAMLTAYAMHGH 413
+ D+ + AL+DMY+KC S K AR + I D +V+ ++ A HG
Sbjct: 398 LNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGE 457
Query: 414 GKEGIAHFRRILASG--FRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHY 471
E + F ++L P+ + AL AC G+++ G + + + ++
Sbjct: 458 ANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFV 517
Query: 472 -TCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
C++D+ S++G++ A + + V W +L+ G HG E
Sbjct: 518 ANCLIDMYSKSGDVDAARVVFDNMHQR-NGVSWTSLMTGYGMHGRGE 563
>gi|359488823|ref|XP_002273685.2| PREDICTED: uncharacterized protein LOC100245824 [Vitis vinifera]
Length = 1984
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 211/629 (33%), Positives = 342/629 (54%), Gaps = 43/629 (6%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y + G+L A+ +F MPER+ VSW+++++ G V E++ ER N N+VS
Sbjct: 97 YVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWYFER-----NPFQNVVS 151
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W+A I GF +NG + EA+ + FR+ G+ PN T +SV+ AC L LG G +
Sbjct: 152 WTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMSILGLVV 211
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
+ GF V N L+ + R G++ A ++F + ++ VS I+ Y E G++ EAR
Sbjct: 212 KAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGDLREARR 271
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
+FD+M +R ISW++MI+ Y + +EA +F ++ ++G +P F L A
Sbjct: 272 IFDEMP----ERNEISWSAMIARYSQSGYAEEALKLFSKMV-QEGFKPNISCFACTLSAL 326
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI--ENI---E 296
A + +L G IH +G+ D F+G +L+++YC+ ++ FD I +N+
Sbjct: 327 ASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVVCWN 386
Query: 297 NLLGKMKEDGF------------EPNVYTW--------------NAMQLFSEMLSLDLTP 330
+++G +G E N +W +++F+ +L TP
Sbjct: 387 SMVGGYSINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVFNTLLVSGQTP 446
Query: 331 DIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAY 390
+ T +L AC+S+A++++G VH I+ G D+ +GTAL DMYAKCG + ++ +
Sbjct: 447 NKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSSKQVF 506
Query: 391 KRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRI-LASGFRPDHISFLSALSACVHAGSI 449
+R+ + +S M+ A G E + F + S P+ + LS L AC H G +
Sbjct: 507 ERMPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSVLFACSHCGLV 566
Query: 450 KTGSEFFDLM-AYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLG 508
G +F+ M Y +KP KHYTC+VDLLSR+G L EA EFI+ IP P++ W ALL
Sbjct: 567 DKGLWYFNSMEKVYGIKPKGKHYTCVVDLLSRSGRLYEAEEFIRTIPFQPEANAWAALLS 626
Query: 509 GCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKS 568
GC + + + + A +L +L NN+ YV+L+N++A AGRW D++ R+ M+++ + KS
Sbjct: 627 GCKKYKDEKIAERTAKKLWQLAENNSAGYVLLSNIYASAGRWIDVSNIRKLMREKGLKKS 686
Query: 569 PGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
GCSW+E R+++H F + D SH +S EIY
Sbjct: 687 GGCSWVEVRNQVHSFYSEDGSHSQSNEIY 715
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 128/544 (23%), Positives = 227/544 (41%), Gaps = 97/544 (17%)
Query: 94 ARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFS 153
A+T S+L + ++ G H ++ + GF S ++ L+ +Y C +I
Sbjct: 21 AQTCVSLLKKFSNQGLITQGNVLHAHLIKTGFSSQRYIAIKLLILYLNCRKFAEIDQIVK 80
Query: 154 KFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHL----------GVQR---------- 193
+F + V N +I Y + GN+ +AR LFD+M G+ +
Sbjct: 81 EFDGSDLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWY 140
Query: 194 -------GIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNS 246
++SW + ISG+V N L EA +F LL G+ P TF SV+ AC ++
Sbjct: 141 FERNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLL-ESGVRPNDVTFTSVVRACGELGD 199
Query: 247 LRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL-------- 298
G I L + G + V +L+ + R ++ A+ FD +E + +
Sbjct: 200 FGLGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDA 259
Query: 299 ---LGKMKE------DGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTV 335
G ++E + E N +W+AM +LFS+M+ P+I
Sbjct: 260 YVETGDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCF 319
Query: 336 GIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST 395
LSA +SL + G +H + + G D DV IG++L+D+Y KCG RL + I
Sbjct: 320 ACTLSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILE 379
Query: 396 PDLVSQNAMLTAYAMHGHG-------------------------------KEGIAHFRRI 424
++V N+M+ Y+++G ++ + F +
Sbjct: 380 KNVVCWNSMVGGYSINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVFNTL 439
Query: 425 LASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGEL 484
L SG P+ +F S L AC S+ G + ++ + T + D+ ++ G++
Sbjct: 440 LVSGQTPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDI 499
Query: 485 GEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQI---AADRLIELEPNNTGNYVMLA 541
G + + +++P + + W ++ G G I +R E+ PN ++L+
Sbjct: 500 GSSKQVFERMP-EKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPN---ELMLLS 555
Query: 542 NLFA 545
LFA
Sbjct: 556 VLFA 559
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 100/188 (53%), Gaps = 5/188 (2%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KCG DD + VF ++ E++ V WNS+V + NG + E E E + N V
Sbjct: 360 LYCKCGKPDDGRLVFDLILEKNVVCWNSMVGGYSINGRLEETEELFELIPE-----KNDV 414
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW +I G+ +N E+ + + + G PN T SSVL ACA + L G HG I
Sbjct: 415 SWGTIIAGYLENEQCEKVLEVFNTLLVSGQTPNKSTFSSVLCACASIASLDKGMNVHGKI 474
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G + FV L D+Y +CGD+ S+ ++F + KNE+S +I G E+G E+
Sbjct: 475 IKLGIQYDIFVGTALTDMYAKCGDIGSSKQVFERMPEKNEISWTVMIQGLAESGFAVESL 534
Query: 181 ELFDQMEH 188
LF++ME
Sbjct: 535 ILFEEMER 542
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 59/117 (50%), Gaps = 1/117 (0%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG + +K+VF+ MPE++ +SW ++ A +G +E+L E M PN +
Sbjct: 492 MYAKCGDIGSSKQVFERMPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNEL 551
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQ-AEGLEPNARTLSSVLPACARLQKLSLGKEF 116
+V+ + G ++ + M+ G++P + + V+ +R +L +EF
Sbjct: 552 MLLSVLFACSHCGLVDKGLWYFNSMEKVYGIKPKGKHYTCVVDLLSRSGRLYEAEEF 608
>gi|222631044|gb|EEE63176.1| hypothetical protein OsJ_17985 [Oryza sativa Japonica Group]
Length = 745
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 216/633 (34%), Positives = 336/633 (53%), Gaps = 75/633 (11%)
Query: 1 MYGKCGSLDDAKKVFKMMPER---DCVSWNSVVTACAANGLVLEALECLERMSSLDNETP 57
MY +CGSL++A +F + +R D +SWNS+V+A + AL+ +M+ + +E P
Sbjct: 54 MYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKP 113
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
+E + + ++ ++LPAC L+ + KE H
Sbjct: 114 T----------------NERS--------------DIISIVNILPACGSLKAVPQTKEVH 143
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
G RNG + FV N L+D Y +CG M +A+K+F+ K+ VS N ++ GY ++GN
Sbjct: 144 GNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFK 203
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
A ELF M + +++W ++I+GY EA ++FR ++ G P T SV
Sbjct: 204 AAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIF-SGSLPNCVTIISV 262
Query: 238 LIACADMNSLRKGKEIHALAIAL----------GLQSDTFVGGALVEMYCRYQDLVAAQM 287
L ACA + + +G EIHA ++ G D V AL++MY + + AA+
Sbjct: 263 LSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARS 322
Query: 288 AFDEIENIENLLGKMKEDGFEPNVYTW--------------NAMQLFSEMLS--LDLTPD 331
FD+I +E E NV TW +A++LF EM+S + P+
Sbjct: 323 IFDDIP-LE-----------ERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPN 370
Query: 332 IYTVGIILSACSSLATMERGKQVHAYAIRC-GYDSDVH-IGTALVDMYAKCGSLKHARLA 389
YT+ IL AC+ LA + GKQ+HAY +R YDS + + L++MY+KCG + AR
Sbjct: 371 AYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHV 430
Query: 390 YKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSI 449
+ +S +S +M+T Y MHG G E + F ++ +GF PD I+FL L AC H G +
Sbjct: 431 FDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMV 490
Query: 450 KTGSEFFDLM-AYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLG 508
G +FD M A Y + P +HY +DLL+R G L +A++ +K +PM P +V+W ALL
Sbjct: 491 DQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLS 550
Query: 509 GCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKS 568
C H N+E + A ++L+E+ N G+Y +++N++A AGRW D+AR R MK + K
Sbjct: 551 ACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKR 610
Query: 569 PGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
PGCSW++ + F DRSH S +IY +++
Sbjct: 611 PGCSWVQGQKGTASFFVGDRSHPLSPQIYALLE 643
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 118/484 (24%), Positives = 211/484 (43%), Gaps = 85/484 (17%)
Query: 85 MQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGD 144
M G + TL VL AC L G FHG I NGF SN F+ N LV +Y RCG
Sbjct: 1 MLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGS 60
Query: 145 MLSALKIFSKFS---IKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSM 201
+ A IF + + I + +S N+I+ + ++ N A +LF +M + ++ + +
Sbjct: 61 LEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDI 120
Query: 202 ISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALG 261
IS ++L AC + ++ + KE+H AI G
Sbjct: 121 IS------------------------------IVNILPACGSLKAVPQTKEVHGNAIRNG 150
Query: 262 LQSDTFVGGALVEMYCR---------------YQDLV---AAQMAFDEIENIE---NLLG 300
D FVG AL++ Y + ++D+V A + + N + L
Sbjct: 151 TFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFK 210
Query: 301 KMKEDGFEPNVYTWN--------------AMQLFSEMLSLDLTPDIYTVGIILSACSSLA 346
M+++ ++ TW A+ +F +M+ P+ T+ +LSAC+SL
Sbjct: 211 NMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLG 270
Query: 347 TMERGKQVHAYAIR-C---------GYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTP 396
+G ++HAY+++ C G D D+ + AL+DMY+KC S K AR + I
Sbjct: 271 AFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLE 330
Query: 397 D--LVSQNAMLTAYAMHGHGKEGIAHFRRILAS--GFRPDHISFLSALSACVHAGSIKTG 452
+ +V+ M+ +A +G + + F +++ G P+ + L AC H +I+ G
Sbjct: 331 ERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIG 390
Query: 453 SEFFDLMAYYDVKPSLKHYT--CMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGC 510
+ + + S ++ C++++ S+ G++ A + ++ W +++ G
Sbjct: 391 KQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQ-KSAISWTSMMTGY 449
Query: 511 VSHG 514
HG
Sbjct: 450 GMHG 453
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 102/353 (28%), Positives = 157/353 (44%), Gaps = 63/353 (17%)
Query: 222 LMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQD 281
++R G FT VL AC ++ S R G H L G +S+ F+ ALV MY R
Sbjct: 1 MLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGS 60
Query: 282 LVAAQMAFDEIEN--IENLLG-KMKEDGFEPNVYTWNAMQLFSEM-LSLDLTP-----DI 332
L A M FDEI I++++ + W A+ LFS+M L + P DI
Sbjct: 61 LEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDI 120
Query: 333 YTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKR 392
++ IL AC SL + + K+VH AIR G DV +G AL+D YAKCG +++A +
Sbjct: 121 ISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNM 180
Query: 393 ISTPDLVSQNAMLTAYA------------------------------MHGHGKEGIAH-- 420
+ D+VS NAM+ Y+ + G+ + G +H
Sbjct: 181 MEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEA 240
Query: 421 ---FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVK------------ 465
FR+++ SG P+ ++ +S LSAC G+ G E + Y +K
Sbjct: 241 LNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGME----IHAYSLKNCLLTLDNDFGG 296
Query: 466 --PSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVM-WGALLGGCVSHGN 515
L Y ++D+ S+ A IP+ +V+ W ++GG +G+
Sbjct: 297 EDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGD 349
>gi|115463097|ref|NP_001055148.1| Os05g0305300 [Oryza sativa Japonica Group]
gi|113578699|dbj|BAF17062.1| Os05g0305300 [Oryza sativa Japonica Group]
Length = 852
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 216/633 (34%), Positives = 336/633 (53%), Gaps = 75/633 (11%)
Query: 1 MYGKCGSLDDAKKVFKMMPER---DCVSWNSVVTACAANGLVLEALECLERMSSLDNETP 57
MY +CGSL++A +F + +R D +SWNS+V+A + AL+ +M+ + +E P
Sbjct: 161 MYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKP 220
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
+E + + ++ ++LPAC L+ + KE H
Sbjct: 221 T----------------NERS--------------DIISIVNILPACGSLKAVPQTKEVH 250
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
G RNG + FV N L+D Y +CG M +A+K+F+ K+ VS N ++ GY ++GN
Sbjct: 251 GNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFK 310
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
A ELF M + +++W ++I+GY EA ++FR ++ G P T SV
Sbjct: 311 AAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIF-SGSLPNCVTIISV 369
Query: 238 LIACADMNSLRKGKEIHALAIAL----------GLQSDTFVGGALVEMYCRYQDLVAAQM 287
L ACA + + +G EIHA ++ G D V AL++MY + + AA+
Sbjct: 370 LSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARS 429
Query: 288 AFDEIENIENLLGKMKEDGFEPNVYTW--------------NAMQLFSEMLS--LDLTPD 331
FD+I +E E NV TW +A++LF EM+S + P+
Sbjct: 430 IFDDIP-LE-----------ERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPN 477
Query: 332 IYTVGIILSACSSLATMERGKQVHAYAIRC-GYDSDVH-IGTALVDMYAKCGSLKHARLA 389
YT+ IL AC+ LA + GKQ+HAY +R YDS + + L++MY+KCG + AR
Sbjct: 478 AYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHV 537
Query: 390 YKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSI 449
+ +S +S +M+T Y MHG G E + F ++ +GF PD I+FL L AC H G +
Sbjct: 538 FDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMV 597
Query: 450 KTGSEFFDLM-AYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLG 508
G +FD M A Y + P +HY +DLL+R G L +A++ +K +PM P +V+W ALL
Sbjct: 598 DQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLS 657
Query: 509 GCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKS 568
C H N+E + A ++L+E+ N G+Y +++N++A AGRW D+AR R MK + K
Sbjct: 658 ACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKR 717
Query: 569 PGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
PGCSW++ + F DRSH S +IY +++
Sbjct: 718 PGCSWVQGQKGTASFFVGDRSHPLSPQIYALLE 750
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 136/541 (25%), Positives = 237/541 (43%), Gaps = 92/541 (17%)
Query: 29 VVTACAANGLVLEALECLERMSSLDNETPN-LVSWSAVIGGFTQNGYDEEAIGMLFRMQA 87
VV + A G AL LER+ TP+ V W+ +I + G + AI + RM
Sbjct: 57 VVASYLACGATDYALLVLERV------TPSPAVWWNLLIREHIKQGRLDSAINVSCRMLR 110
Query: 88 EGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLS 147
G + TL VL AC L G FHG I NGF SN F+ N LV +Y RCG +
Sbjct: 111 AGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEE 170
Query: 148 ALKIFSKFS---IKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISG 204
A IF + + I + +S N+I+ + ++ N A +LF +M + ++ + +IS
Sbjct: 171 ASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIIS- 229
Query: 205 YVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQS 264
++L AC + ++ + KE+H AI G
Sbjct: 230 -----------------------------IVNILPACGSLKAVPQTKEVHGNAIRNGTFL 260
Query: 265 DTFVGGALVEMYCR---------------YQDLV---AAQMAFDEIENIE---NLLGKMK 303
D FVG AL++ Y + ++D+V A + + N + L M+
Sbjct: 261 DVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMR 320
Query: 304 EDGFEPNVYTWN--------------AMQLFSEMLSLDLTPDIYTVGIILSACSSLATME 349
++ ++ TW A+ +F +M+ P+ T+ +LSAC+SL
Sbjct: 321 KENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFS 380
Query: 350 RGKQVHAYAIR-C---------GYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPD-- 397
+G ++HAY+++ C G D D+ + AL+DMY+KC S K AR + I +
Sbjct: 381 QGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERN 440
Query: 398 LVSQNAMLTAYAMHGHGKEGIAHFRRILAS--GFRPDHISFLSALSACVHAGSIKTGSEF 455
+V+ M+ +A +G + + F +++ G P+ + L AC H +I+ G +
Sbjct: 441 VVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQI 500
Query: 456 FDLMAYYDVKPSLKHYT--CMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSH 513
+ + S ++ C++++ S+ G++ A + ++ W +++ G H
Sbjct: 501 HAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQK-SAISWTSMMTGYGMH 559
Query: 514 G 514
G
Sbjct: 560 G 560
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 108/379 (28%), Positives = 168/379 (44%), Gaps = 64/379 (16%)
Query: 196 ISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHA 255
+ WN +I ++ D A ++ +L R G FT VL AC ++ S R G H
Sbjct: 83 VWWNLLIREHIKQGRLDSAINVSCRML-RAGTRLDHFTLPHVLKACGELPSYRCGSAFHG 141
Query: 256 LAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIEN--IENLLG-KMKEDGFEPNVY 312
L G +S+ F+ ALV MY R L A M FDEI I++++ +
Sbjct: 142 LICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSN 201
Query: 313 TWNAMQLFSEM-LSLDLTP-----DIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSD 366
W A+ LFS+M L + P DI ++ IL AC SL + + K+VH AIR G D
Sbjct: 202 AWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLD 261
Query: 367 VHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYA----------------- 409
V +G AL+D YAKCG +++A + + D+VS NAM+ Y+
Sbjct: 262 VFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRK 321
Query: 410 -------------MHGHGKEGIAH-----FRRILASGFRPDHISFLSALSACVHAGSIKT 451
+ G+ + G +H FR+++ SG P+ ++ +S LSAC G+
Sbjct: 322 ENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQ 381
Query: 452 GSEFFDLMAYYDVK--------------PSLKHYTCMVDLLSRAGELGEAYEFIKKIPMA 497
G E + Y +K L Y ++D+ S+ A IP+
Sbjct: 382 GME----IHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLE 437
Query: 498 PDSVM-WGALLGGCVSHGN 515
+V+ W ++GG +G+
Sbjct: 438 ERNVVTWTVMIGGHAQYGD 456
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 80/196 (40%), Gaps = 6/196 (3%)
Query: 369 IGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASG 428
+GT +V Y CG+ +A L +R++ V N ++ + G I R+L +G
Sbjct: 53 LGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAG 112
Query: 429 FRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAY 488
R DH + L AC S + GS F L+ + ++ +V + SR G L EA
Sbjct: 113 TRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEAS 172
Query: 489 EFIKKIPM--APDSVMWGALLGGCVSHGN----LEFGQIAADRLIELEPNNTGNYVMLAN 542
+I D + W +++ V N L+ + E N + + + N
Sbjct: 173 MIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVN 232
Query: 543 LFAYAGRWSDLARTRQ 558
+ G + +T++
Sbjct: 233 ILPACGSLKAVPQTKE 248
>gi|115455659|ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711328|gb|ABF99123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113549901|dbj|BAF13344.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|215741536|dbj|BAG98031.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 804
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 203/634 (32%), Positives = 337/634 (53%), Gaps = 46/634 (7%)
Query: 3 GKCGSLDDAKKVFKMMP--ERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
G G L DA+++F +P R+ +WNS+++ A +G + +A M D V
Sbjct: 76 GGAGGLRDARRLFDEIPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERD-----AV 130
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ ++ G + G EAI L M A+G P TL++VL +CA Q ++G++ H ++
Sbjct: 131 SWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFV 190
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G S V N ++++Y +CGD +A +F + +++ S N ++ G + A
Sbjct: 191 VKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAE 250
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LF+ M R I+SWN+MI+GY N L +A +F +L + P FT SVL A
Sbjct: 251 SLFESMP----DRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSA 306
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDE--------- 291
CA++ ++R GK++HA + + ++ V AL+ Y + + A+ D+
Sbjct: 307 CANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVI 366
Query: 292 --------------IENIENLLGKMKED----------GFEPNVYTWNAMQLFSEMLSLD 327
+E+ + G M G+E N A+ LF M++
Sbjct: 367 SFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCG 426
Query: 328 LTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHAR 387
P+ YT+ +LS C+SLA ++ GKQ+H AIR + + A++ MYA+ GS AR
Sbjct: 427 PEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWAR 486
Query: 388 LAYKRIS-TPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHA 446
+ ++ + ++ +M+ A A HG G+E + F +L +G PD I+++ LSAC HA
Sbjct: 487 RMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHA 546
Query: 447 GSIKTGSEFFD-LMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGA 505
G + G ++D + + + P + HY CMVDLL+RAG EA EFI+++P+ PD++ WG+
Sbjct: 547 GFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGS 606
Query: 506 LLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRM 565
LL C H N E ++AA++L+ ++PNN+G Y +AN+++ GRWSD AR + K++ +
Sbjct: 607 LLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKARKEKAV 666
Query: 566 HKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTI 599
K G SW R +IH F A D H + + +Y +
Sbjct: 667 RKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAM 700
>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 206/602 (34%), Positives = 318/602 (52%), Gaps = 73/602 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC +DDA K+F MPERD LV
Sbjct: 191 MYAKCRQIDDAYKMFDRMPERD------------------------------------LV 214
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ +I GF+QNG+ ++A+ ++ RMQ EG P++ TL +VLPA A + L +GK HGY
Sbjct: 215 SWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYA 274
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R GF + L D+Y +CG +V AR
Sbjct: 275 IRAGFAKLVNISTALADMYSKCG-------------------------------SVETAR 303
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+FD M+ Q+ ++SWNSM+ GYV N ++A ++F +L +GI+PT T L A
Sbjct: 304 LIFDGMD----QKTVVSWNSMMDGYVQNGEPEKAIAVFEKML-EEGIDPTGVTIMEALHA 358
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CAD+ L +GK +H L L SD V +L+ MY + + + A F+ + ++
Sbjct: 359 CADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSW 418
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G+ N A+ FSEM SL + PD +T+ ++ A + L+ K +H IR
Sbjct: 419 NAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIR 478
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
D ++ + TALVDMY+KCG++ AR + IS +++ NAM+ Y HG G+ +
Sbjct: 479 SCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDL 538
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLS 479
F ++ P+ I++LS +SAC H+G + G F M Y ++PS+ HY MVDLL
Sbjct: 539 FDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLG 598
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
RAG + EA++FI+ +P++P ++GA G C H N+E G+ AA +L EL P+ G +V+
Sbjct: 599 RAGRIKEAWDFIENMPISPGITVYGAXXGACKIHKNIEVGEKAAKKLFELNPDEGGYHVL 658
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTI 599
LAN++A +WS +A R+ M+ + + K+PGCS +E R+E+H F + +H +S+ IY
Sbjct: 659 LANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQSKRIYAF 718
Query: 600 ID 601
++
Sbjct: 719 LE 720
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 132/505 (26%), Positives = 226/505 (44%), Gaps = 46/505 (9%)
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
+ ++ G+ +N E A+ L RM+ + ++P + +L C L GKE HG +
Sbjct: 115 YHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLI 174
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
N F +N F + G+V++Y +C + A K+F + ++ VS NTII G+ +NG +A E
Sbjct: 175 TNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALE 234
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
L +M+ DE G P S T +VL A
Sbjct: 235 LVLRMQ------------------------DE------------GQRPDSITLVTVLPAA 258
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK 301
AD+ L GK IH AI G + AL +MY + + A++ FD ++ +
Sbjct: 259 ADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWN 318
Query: 302 MKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRC 361
DG+ N A+ +F +ML + P T+ L AC+ L +ERGK VH + +
Sbjct: 319 SMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQL 378
Query: 362 GYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHF 421
SD+ + +L+ MY+KC + A + ++ VS NAM+ YA +G E + F
Sbjct: 379 NLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCF 438
Query: 422 RRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRA 481
+ + G +PD + +S + A + L+ + ++ T +VD+ S+
Sbjct: 439 SEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKC 498
Query: 482 GELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIEL-----EPNNTGN 536
G + A + I + W A++ G +HG G+ A D ++ EPN+
Sbjct: 499 GAIHMARKLFDMIS-DRHVITWNAMIDGYGTHG---LGRAALDLFDKMKKGAVEPNDI-T 553
Query: 537 YVMLANLFAYAGRWSDLARTRQKMK 561
Y+ + + +++G + R + MK
Sbjct: 554 YLSVISACSHSGLVDEGLRHFKSMK 578
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 130/297 (43%), Gaps = 1/297 (0%)
Query: 245 NSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKE 304
S+++ +I L I GL ++ LV ++ +Y + A F+ I++ + L
Sbjct: 60 TSMKELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTML 119
Query: 305 DGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYD 364
G+ N A+ M D+ P +Y +L C A ++RGK++H I +
Sbjct: 120 KGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFA 179
Query: 365 SDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRI 424
++V T +V+MYAKC + A + R+ DLVS N ++ ++ +G K+ + R+
Sbjct: 180 ANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRM 239
Query: 425 LASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGEL 484
G RPD I+ ++ L A G + G + T + D+ S+ G +
Sbjct: 240 QDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSV 299
Query: 485 GEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLA 541
A + V W +++ G V +G E ++++E + TG +M A
Sbjct: 300 ETARLIFDGMDQKT-VVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEA 355
>gi|125545880|gb|EAY92019.1| hypothetical protein OsI_13712 [Oryza sativa Indica Group]
Length = 804
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 202/634 (31%), Positives = 337/634 (53%), Gaps = 46/634 (7%)
Query: 3 GKCGSLDDAKKVFKMMP--ERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
G G L DA+++F +P R+ +WNS+++ A +G + +A M D V
Sbjct: 76 GGAGGLRDARRLFDEIPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERD-----AV 130
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ ++ G + G EAI L M A+G P TL++VL +CA Q ++G++ H ++
Sbjct: 131 SWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFV 190
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G S V N ++++Y +CGD +A +F + +++ S N ++ G + A
Sbjct: 191 VKLGLGSCVPVANSVLNMYGKCGDAETASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAE 250
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LF+ M R I+SWN+MI+GY N L +A +F +L + P FT SVL A
Sbjct: 251 SLFESMP----GRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSA 306
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCR---------------------- 278
CA++ ++R GK++HA + + ++ V AL+ Y +
Sbjct: 307 CANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVI 366
Query: 279 -YQDLVAAQMAFDEIENIENLLGKMKED----------GFEPNVYTWNAMQLFSEMLSLD 327
+ L+ + ++E+ + G M G+E N A+ LF M++
Sbjct: 367 SFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCG 426
Query: 328 LTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHAR 387
P+ YT+ +LS C+SLA ++ GKQ+H AIR + + A++ MYA+ GS AR
Sbjct: 427 PEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLERSSSVSNAIITMYARSGSFPWAR 486
Query: 388 LAYKRIS-TPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHA 446
+ ++ + ++ +M+ A A HG G+E + F +L +G PD I+++ LSAC HA
Sbjct: 487 RMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHA 546
Query: 447 GSIKTGSEFFD-LMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGA 505
G + G ++D + + + P + HY CMVDLL+RAG EA EFI+++P+ PD++ WG+
Sbjct: 547 GFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGS 606
Query: 506 LLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRM 565
LL C H N E ++AA++L+ ++PNN+G Y +AN+++ GRWSD AR + K++ +
Sbjct: 607 LLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKARKEKAV 666
Query: 566 HKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTI 599
K G SW R +IH F A D H + + +Y +
Sbjct: 667 RKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAM 700
>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 207/614 (33%), Positives = 329/614 (53%), Gaps = 51/614 (8%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSL-------- 52
MY CG L + +++F + WN ++ A G E+L +RM L
Sbjct: 145 MYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESA 204
Query: 53 -----DNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARL 107
+ +++SW+++I G+ NG E+ + + +M G+ + T+ SV+ C+
Sbjct: 205 RKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNT 264
Query: 108 QKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTII 167
L LG+ HGY + F + N L+D+Y +
Sbjct: 265 GMLLLGRALHGYAIKASFGKELTLNNCLLDMYSK-------------------------- 298
Query: 168 VGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGI 227
+GN+ A ++F+ M +R ++SW SMI+GY L D + +F ++ ++GI
Sbjct: 299 -----SGNLNSAIQVFETMG----ERSVVSWTSMIAGYAREGLSDMSVRLFHEM-EKEGI 348
Query: 228 EPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQM 287
P FT ++L ACA L GK++H +QSD FV AL++MY + + A
Sbjct: 349 SPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAHS 408
Query: 288 AFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLAT 347
F E++ + + G+ N A+ LF EM + P+ T+ IL AC+SLA
Sbjct: 409 VFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEM-QYNSKPNSITMACILPACASLAA 467
Query: 348 MERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTA 407
+ERG+++H + +R G+ D H+ ALVDMY KCG+L ARL + I DLVS M+
Sbjct: 468 LERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAG 527
Query: 408 YAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYD-VKP 466
Y MHG+G E IA F + SG PD +SF+S L AC H+G + G FF++M ++P
Sbjct: 528 YGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIEP 587
Query: 467 SLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRL 526
+HY C+VDLL+RAG L +AY+FIK +P+ PD+ +WGALL GC + +++ + A+ +
Sbjct: 588 KSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRIYHDVKLAEKVAEHV 647
Query: 527 IELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRAS 586
ELEP NTG YV+LAN++A A +W ++ + R+++ R + K+PGCSWIE + ++H F
Sbjct: 648 FELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLRKNPGCSWIEIKGKVHIFVTG 707
Query: 587 DRSHDRSEEIYTII 600
D SH + +I ++
Sbjct: 708 DSSHPLANKIELLL 721
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 136/481 (28%), Positives = 221/481 (45%), Gaps = 21/481 (4%)
Query: 50 SSLDNETPN--LVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARL 107
S L +ET + + ++ I F + G A+ ++ + LE RT SVL CA L
Sbjct: 57 SVLPSETIDCKITDYNIEICRFCELGNLRRAMELINQSPKPDLE--LRTYCSVLQLCADL 114
Query: 108 QKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTII 167
+ + G+ H I N + + + LV +Y CGD+ +IF K + + N ++
Sbjct: 115 KSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLM 174
Query: 168 VGYCENGNVAEARELFDQMEHLGVQ--------------RGIISWNSMISGYVDNSLYDE 213
GY + GN E+ LF +M LG++ R +ISWNSMISGYV N L ++
Sbjct: 175 NGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEK 234
Query: 214 AFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALV 273
+F +L+ GI T SV+ C++ L G+ +H AI + + L+
Sbjct: 235 GLDLFEQMLLL-GINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKASFGKELTLNNCLL 293
Query: 274 EMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIY 333
+MY + +L +A F+ + + G+ + +++LF EM ++PDI+
Sbjct: 294 DMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIF 353
Query: 334 TVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRI 393
T+ IL AC+ +E GK VH Y SD+ + AL+DMYAKCGS+ A + +
Sbjct: 354 TITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEM 413
Query: 394 STPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGS 453
D+VS N M+ Y+ + E + F + + +P+ I+ L AC +++ G
Sbjct: 414 QVKDIVSWNTMIGGYSKNSLPNEALNLFVEMQYNS-KPNSITMACILPACASLAALERGQ 472
Query: 454 EFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSH 513
E + +VD+ + G LG A IP D V W ++ G H
Sbjct: 473 EIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIP-EKDLVSWTVMIAGYGMH 531
Query: 514 G 514
G
Sbjct: 532 G 532
>gi|356567156|ref|XP_003551787.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 852
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 220/668 (32%), Positives = 332/668 (49%), Gaps = 112/668 (16%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC LDDA +VF+ MPER NLV
Sbjct: 182 MYSKCKKLDDAFRVFREMPER------------------------------------NLV 205
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
WSAVI G+ QN E + + M G+ + T +SV +CA L LG + HG+
Sbjct: 206 CWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHA 265
Query: 121 TRNGFMSNPFVVNGLVDV-------------------------------YRRCGDMLSAL 149
++ F + + +D+ Y R L AL
Sbjct: 266 LKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKAL 325
Query: 150 KIFSKFSIKN------------------------------EVSC---------NTIIVGY 170
IF N V C NTI+ Y
Sbjct: 326 DIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGIQLHGLAVKCGLGFNICVANTILDMY 385
Query: 171 CENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPT 230
+ G + EA +F++ME +R +SWN++I+ + N + S+F +L R +EP
Sbjct: 386 GKCGALMEACLIFEEME----RRDAVSWNAIIAAHEQNEEIVKTLSLFVSML-RSTMEPD 440
Query: 231 SFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFD 290
FT+GSV+ ACA +L G EIH I G+ D FVG ALV+MY + L+ A+
Sbjct: 441 DFTYGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHA 500
Query: 291 EIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMER 350
+E + GF + NA + FS+ML + + PD YT +L C+++AT+E
Sbjct: 501 RLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGIIPDNYTYATVLDVCANMATIEL 560
Query: 351 GKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAM 410
GKQ+HA ++ SDV+I + LVDMY+KCG+++ +RL +++ D V+ +AM+ AYA
Sbjct: 561 GKQIHAQILKLQLHSDVYIASTLVDMYSKCGNMQDSRLMFEKAPKRDYVTWSAMICAYAY 620
Query: 411 HGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFD-LMAYYDVKPSLK 469
HG G++ I F + +P+H F+S L AC H G + G +F ++++Y + P ++
Sbjct: 621 HGLGEKAINLFEEMQLLNVKPNHTIFISVLRACAHMGYVDKGLHYFQKMLSHYGLDPQME 680
Query: 470 HYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIEL 529
HY+CMVDLL R+G++ EA + I+ +P D V+W LL C GN+E + A + L++L
Sbjct: 681 HYSCMVDLLGRSGQVNEALKLIESMPFEADDVIWRTLLSNCKMQGNVEVAEKAFNSLLQL 740
Query: 530 EPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRS 589
+P ++ YV+LAN++A G W ++A+ R MK+ ++ K PGCSWIE RDE+H F D++
Sbjct: 741 DPQDSSAYVLLANVYAIVGMWGEVAKMRSIMKNCKLKKEPGCSWIEVRDEVHTFLVGDKA 800
Query: 590 HDRSEEIY 597
H RSEEIY
Sbjct: 801 HPRSEEIY 808
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 127/534 (23%), Positives = 251/534 (47%), Gaps = 44/534 (8%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y K ++ A KVF MP+RD +SWN+++ A G + A + M D +VS
Sbjct: 51 YCKSSKMNYAFKVFDRMPQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERD-----VVS 105
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W++++ + NG + ++I + RM++ + + T + +L AC+ ++ LG + H
Sbjct: 106 WNSLLSCYLHNGVNRKSIEIFVRMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAI 165
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
+ GF ++ + LVD+Y +C + A ++F RE
Sbjct: 166 QMGFENDVVTGSALVDMYSKCKKLDDAFRVF---------------------------RE 198
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
+ +R ++ W+++I+GYV N + E +F+D+L + G+ + T+ SV +C
Sbjct: 199 M--------PERNLVCWSAVIAGYVQNDRFIEGLKLFKDML-KVGMGVSQSTYASVFRSC 249
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK 301
A +++ + G ++H A+ D+ +G A ++MY + + + A F+ + N
Sbjct: 250 AGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNPPRQSYN 309
Query: 302 MKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRC 361
G+ A+ +F + +L D ++ L+ACS + G Q+H A++C
Sbjct: 310 AIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGIQLHGLAVKC 369
Query: 362 GYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHF 421
G ++ + ++DMY KCG+L A L ++ + D VS NA++ A+ + + ++ F
Sbjct: 370 GLGFNICVANTILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQNEEIVKTLSLF 429
Query: 422 RRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRA 481
+L S PD ++ S + AC ++ G+E + + + +VD+ +
Sbjct: 430 VSMLRSTMEPDDFTYGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFVGSALVDMYGKC 489
Query: 482 GELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELE--PNN 533
G L EA + ++ +V W +++ G S E Q +++E+ P+N
Sbjct: 490 GMLMEAEKIHARLE-EKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGIIPDN 542
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 124/426 (29%), Positives = 207/426 (48%), Gaps = 17/426 (3%)
Query: 90 LEPNAR-TLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSA 148
+ P + T S +L C+ L+ L+ GK+ H + GF+ +V N L+ Y + M A
Sbjct: 1 MNPTKKLTFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYA 60
Query: 149 LKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDN 208
K+F + ++ +S NT+I GY GN+ A+ LFD M +R ++SWNS++S Y+ N
Sbjct: 61 FKVFDRMPQRDVISWNTLIFGYAGIGNMGFAQSLFDSMP----ERDVVSWNSLLSCYLHN 116
Query: 209 SLYDEAFSMFRDLLMRDGIEPTSF-TFGSVLIACADMNSLRKGKEIHALAIALGLQSDTF 267
+ ++ +F + MR P + TF +L AC+ + G ++H LAI +G ++D
Sbjct: 117 GVNRKSIEIF--VRMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVV 174
Query: 268 VGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLD 327
G ALV+MY + + L A F E+ + G+ N ++LF +ML +
Sbjct: 175 TGSALVDMYSKCKKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVG 234
Query: 328 LTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHAR 387
+ T + +C+ L+ + G Q+H +A++ + D IGTA +DMYAKC + A
Sbjct: 235 MGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAW 294
Query: 388 LAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAG 447
+ + P S NA++ YA G + + F+ + + D IS AL+AC
Sbjct: 295 KVFNTLPNPPRQSYNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTAC---S 351
Query: 448 SIKTGSEFFDLMAYYDVKPSLKHYTC----MVDLLSRAGELGEAYEFIKKIPMAPDSVMW 503
IK E L VK L C ++D+ + G L EA +++ D+V W
Sbjct: 352 VIKRHLEGIQLHG-LAVKCGLGFNICVANTILDMYGKCGALMEACLIFEEME-RRDAVSW 409
Query: 504 GALLGG 509
A++
Sbjct: 410 NAIIAA 415
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 148/344 (43%), Gaps = 42/344 (12%)
Query: 227 IEPTS-FTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAA 285
+ PT TF +L C+++ +L GK++H I G +V L++ YC+ + A
Sbjct: 1 MNPTKKLTFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYA 60
Query: 286 QMAFDEIENIENL-----------LGKMKEDGF---------EPNVYTWNAM-------- 317
FD + + + +G M GF E +V +WN++
Sbjct: 61 FKVFDRMPQRDVISWNTLIFGYAGIGNM---GFAQSLFDSMPERDVVSWNSLLSCYLHNG 117
Query: 318 ------QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGT 371
++F M SL + D T +IL ACS + G QVH AI+ G+++DV G+
Sbjct: 118 VNRKSIEIFVRMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGS 177
Query: 372 ALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRP 431
ALVDMY+KC L A ++ + +LV +A++ Y + EG+ F+ +L G
Sbjct: 178 ALVDMYSKCKKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGV 237
Query: 432 DHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFI 491
++ S +C + K G++ D T +D+ ++ + +A++
Sbjct: 238 SQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVF 297
Query: 492 KKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTG 535
+P P ++G + + G A D L+ NN G
Sbjct: 298 NTLPNPPRQSYNAIIVG----YARQDQGLKALDIFQSLQRNNLG 337
>gi|356523677|ref|XP_003530462.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 852
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 222/668 (33%), Positives = 335/668 (50%), Gaps = 112/668 (16%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC LD A ++F+ MPER NLV
Sbjct: 182 MYSKCKKLDGAFRIFREMPER------------------------------------NLV 205
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
WSAVI G+ QN E + + M G+ + T +SV +CA L LG + HG+
Sbjct: 206 CWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHA 265
Query: 121 TRNGF-------------------MSNPFVV------------NGLVDVYRRCGDMLSAL 149
++ F MS+ + V N ++ Y R L AL
Sbjct: 266 LKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKAL 325
Query: 150 KIFSKFS--------------------IKNE----------VSC---------NTIIVGY 170
+IF IK V C NTI+ Y
Sbjct: 326 EIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQLHGLAVKCGLGFNICVANTILDMY 385
Query: 171 CENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPT 230
+ G + EA +FD ME +R +SWN++I+ + N + S+F +L R +EP
Sbjct: 386 GKCGALVEACTIFDDME----RRDAVSWNAIIAAHEQNEEIVKTLSLFVSML-RSTMEPD 440
Query: 231 SFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFD 290
FT+GSV+ ACA +L G EIH + G+ D FVG ALV+MY + L+ A+ D
Sbjct: 441 DFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHD 500
Query: 291 EIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMER 350
+E + GF + NA + FS+ML + + PD +T +L C+++AT+E
Sbjct: 501 RLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGVIPDNFTYATVLDVCANMATIEL 560
Query: 351 GKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAM 410
GKQ+HA ++ SDV+I + LVDMY+KCG+++ +RL +++ D V+ +AM+ AYA
Sbjct: 561 GKQIHAQILKLNLHSDVYIASTLVDMYSKCGNMQDSRLMFEKTPKRDYVTWSAMICAYAY 620
Query: 411 HGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLK 469
HGHG++ I F + +P+H F+S L AC H G + G +F +M ++Y + P ++
Sbjct: 621 HGHGEQAIKLFEEMQLLNVKPNHTIFISVLRACAHMGYVDKGLHYFQIMQSHYGLDPHME 680
Query: 470 HYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIEL 529
HY+CMVDLL R+ ++ EA + I+ + D V+W LL C GN+E + A + L++L
Sbjct: 681 HYSCMVDLLGRSDQVNEALKLIESMHFEADDVIWRTLLSNCKMQGNVEVAEKAFNSLLQL 740
Query: 530 EPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRS 589
+P ++ YV+LAN++A G W ++A+ R MK+ ++ K PGCSWIE RDE+H F D++
Sbjct: 741 DPQDSSAYVLLANVYANVGMWGEVAKIRSIMKNCKLKKEPGCSWIEVRDEVHTFLVGDKA 800
Query: 590 HDRSEEIY 597
H RSEEIY
Sbjct: 801 HPRSEEIY 808
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 129/534 (24%), Positives = 248/534 (46%), Gaps = 44/534 (8%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y K +++ A KVF MP RD +SWN+++ A G + A + M D +VS
Sbjct: 51 YCKSSNMNYAFKVFDRMPHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERD-----VVS 105
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W++++ + NG + ++I + RM++ + + T S VL AC+ ++ LG + H
Sbjct: 106 WNSLLSCYLHNGVNRKSIEIFVRMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAI 165
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
+ GF ++ + LVD+Y +C + A +IF RE
Sbjct: 166 QMGFENDVVTGSALVDMYSKCKKLDGAFRIF---------------------------RE 198
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
+ +R ++ W+++I+GYV N + E +F+D+L + G+ + T+ SV +C
Sbjct: 199 M--------PERNLVCWSAVIAGYVQNDRFIEGLKLFKDML-KVGMGVSQSTYASVFRSC 249
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK 301
A +++ + G ++H A+ D+ +G A ++MY + + A F+ + N
Sbjct: 250 AGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPPRQSYN 309
Query: 302 MKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRC 361
G+ A+++F + L+ D ++ L+ACS + G Q+H A++C
Sbjct: 310 AIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQLHGLAVKC 369
Query: 362 GYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHF 421
G ++ + ++DMY KCG+L A + + D VS NA++ A+ + + ++ F
Sbjct: 370 GLGFNICVANTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEIVKTLSLF 429
Query: 422 RRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRA 481
+L S PD ++ S + AC ++ G E + + + +VD+ +
Sbjct: 430 VSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVGSALVDMYGKC 489
Query: 482 GELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELE--PNN 533
G L EA + ++ +V W +++ G S E Q +++E+ P+N
Sbjct: 490 GMLMEAEKIHDRLE-EKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGVIPDN 542
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 124/426 (29%), Positives = 205/426 (48%), Gaps = 17/426 (3%)
Query: 90 LEPNAR-TLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSA 148
+ P + T S +L C+ L+ L+ GK+ H + F+ +V N LV Y + +M A
Sbjct: 1 MNPTKKFTFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYA 60
Query: 149 LKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDN 208
K+F + ++ +S NT+I GY E GN+ A+ LFD M +R ++SWNS++S Y+ N
Sbjct: 61 FKVFDRMPHRDVISWNTMIFGYAEIGNMGFAQSLFDTMP----ERDVVSWNSLLSCYLHN 116
Query: 209 SLYDEAFSMFRDLLMRDGIEPTSF-TFGSVLIACADMNSLRKGKEIHALAIALGLQSDTF 267
+ ++ +F + MR P + TF VL AC+ + G ++H LAI +G ++D
Sbjct: 117 GVNRKSIEIF--VRMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVV 174
Query: 268 VGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLD 327
G ALV+MY + + L A F E+ + G+ N ++LF +ML +
Sbjct: 175 TGSALVDMYSKCKKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVG 234
Query: 328 LTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHAR 387
+ T + +C+ L+ + G Q+H +A++ + D IGTA +DMYAKC + A
Sbjct: 235 MGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAW 294
Query: 388 LAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAG 447
+ + P S NA++ YA G + + F+ + + D IS AL+AC
Sbjct: 295 KVFNTLPNPPRQSYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIK 354
Query: 448 SIKTGSEFFDLMAYYDVKPSLKHYTC----MVDLLSRAGELGEAYEFIKKIPMAPDSVMW 503
G + L VK L C ++D+ + G L EA + D+V W
Sbjct: 355 GHLEGIQLHGLA----VKCGLGFNICVANTILDMYGKCGALVEACTIFDDME-RRDAVSW 409
Query: 504 GALLGG 509
A++
Sbjct: 410 NAIIAA 415
>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
Length = 980
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 205/597 (34%), Positives = 316/597 (52%), Gaps = 72/597 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGS++DA +VF ++ R N+V
Sbjct: 350 MYTKCGSMEDALEVFNLVKGR------------------------------------NVV 373
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A+I GF Q+G EEA +M G+EPN T S+L AC+R L G++ H I
Sbjct: 374 SWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRI 433
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G++++ V L+ +Y +CG ++ A +F + S
Sbjct: 434 IKAGYITDDRVRTALLSMYAKCGSLMDARNVFERIS------------------------ 469
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
++ +++WN+MI+ YV + YD A + F+ LL ++GI+P S TF S+L
Sbjct: 470 -----------KQNVVAWNAMITAYVQHEKYDNAVATFQALL-KEGIKPDSSTFTSILNV 517
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C ++L GK + +L I G +SD + ALV M+ DL++A F+++ + +
Sbjct: 518 CKSPDALELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPERDLVSW 577
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
GF + A F M + PD T +L+AC+S + G+++HA
Sbjct: 578 NTIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTEGRRLHALITE 637
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
D DV +GT L+ MY KCGS+ A L + + ++ S +M+T YA HG GKE +
Sbjct: 638 AALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLPKKNVYSWTSMITGYAQHGRGKEALEL 697
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSR 480
F ++ G +PD I+F+ ALSAC HAG IK G F+ M ++++P ++HY CMVDL R
Sbjct: 698 FCQMQQEGVKPDWITFVGALSACAHAGLIKEGLHHFESMKDFNIEPRMEHYGCMVDLFGR 757
Query: 481 AGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVML 540
AG L EA EFI K+ + PDS +WGALLG C H ++E + A + +EL+PN+ G YV+L
Sbjct: 758 AGLLHEAVEFINKMQVKPDSRLWGALLGACQVHLDVELAEKVAQKKLELDPNDDGVYVIL 817
Query: 541 ANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
+N++A AG W ++ + R+ M DR + K PG SWIE +H F + D++H + EEI+
Sbjct: 818 SNIYAAAGMWKEVTKMRKVMLDRGVVKKPGQSWIEVDGRVHIFCSDDKTHPQIEEIH 874
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 138/519 (26%), Positives = 236/519 (45%), Gaps = 73/519 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG+ + AK++F MP++D +
Sbjct: 148 MYAKCGNTNSAKQIFDEMPDKD------------------------------------VY 171
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ ++GG+ Q+ EEA + +M +G++P+ T +L ACA + + G E I
Sbjct: 172 SWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLI 231
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
G+ ++ FV L++++ +CG + ALK+F+ ++ ++ ++I G + +A
Sbjct: 232 LNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQAC 291
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LF ME +G++P F S+L A
Sbjct: 292 NLFQVME------------------------------------EEGVQPDKVAFVSLLKA 315
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C +L +GK +HA +GL ++ +VG AL+ MY + + A F+ ++ +
Sbjct: 316 CNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSW 375
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
GF + A F++M+ + P+ T IL ACS + +++G+Q+H I+
Sbjct: 376 TAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIK 435
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
GY +D + TAL+ MYAKCGSL AR ++RIS ++V+ NAM+TAY H +A
Sbjct: 436 AGYITDDRVRTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKYDNAVAT 495
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSR 480
F+ +L G +PD +F S L+ C +++ G L+ + L +V +
Sbjct: 496 FQALLKEGIKPDSSTFTSILNVCKSPDALELGKWVQSLIIRAGFESDLHIRNALVSMFVN 555
Query: 481 AGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFG 519
G+L A +P D V W ++ G V HG +F
Sbjct: 556 CGDLMSAMNLFNDMP-ERDLVSWNTIIAGFVQHGENQFA 593
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 163/333 (48%), Gaps = 8/333 (2%)
Query: 233 TFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI 292
T+ S+L C +L G+ IH +Q D F+ L+ MY + + +A+ FDE+
Sbjct: 106 TYSSLLQLCIKHKNLGDGERIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEM 165
Query: 293 ENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGK 352
+ + + G+ + A +L +M+ + PD YT +L+AC+ +++G
Sbjct: 166 PDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGG 225
Query: 353 QVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHG 412
++ + + G+D+D+ +GTAL++M+ KCG + A + + DL++ +M+T A H
Sbjct: 226 ELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHR 285
Query: 413 HGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYT 472
K+ F+ + G +PD ++F+S L AC H +++ G M + + T
Sbjct: 286 QFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGT 345
Query: 473 CMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIE--LE 530
++ + ++ G + +A E + + V W A++ G HG +E + +++IE +E
Sbjct: 346 ALLSMYTKCGSMEDALEVFNLVK-GRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIE 404
Query: 531 PNNTGNYVMLANLFAYAGRWSDLARTRQKMKDR 563
PN V ++ R S L + RQ + DR
Sbjct: 405 PNR----VTFMSILGACSRPSALKQGRQ-IHDR 432
>gi|148906747|gb|ABR16520.1| unknown [Picea sitchensis]
Length = 644
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 196/584 (33%), Positives = 321/584 (54%), Gaps = 53/584 (9%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y K GSL +A++VF MP ++ VSW
Sbjct: 109 IYVKLGSLVEARRVFDEMPVKNVVSW---------------------------------- 134
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+A+I + ++ + +EA+G + MQ G++PN T +S+LPAC L+ L EFH I
Sbjct: 135 --TAMIAAYARHEHGQEALGFFYEMQDVGIQPNHFTFASILPACTDLEVLG---EFHDEI 189
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ GF SN FV NGLVD+Y + G + A ++F K ++ VS N +I GY +NG + +A
Sbjct: 190 VKGGFESNVFVGNGLVDMYAKRGCIEFARELFDKMPQRDVVSWNAMIAGYVQNGLIEDAL 249
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+LF ++ +R +I+WN+M++GY + A +F + E ++ +++
Sbjct: 250 KLFQEIP----KRDVITWNTMMAGYAQCGDVENAVELFEKM-----PEQNLVSWNTMIAG 300
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
S+++ ++ + + + A++ + + + A F + +
Sbjct: 301 YVQNGSVKEAFKLFQIMP----ERNVISWNAVISGFAQNGQVEEALKLFKTMPECNVVSW 356
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G+ N NA++LF +M +D+ P+ T I+L AC++LA +E+G + H IR
Sbjct: 357 NAMIAGYSQNGQAENALKLFGQMQMVDMKPNTETFAIVLPACAALAVLEQGNEAHEVVIR 416
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
G+ SDV +G LV MYAKCGS++ AR + R+ D S +AM+ YA++G KE +
Sbjct: 417 SGFQSDVLVGNTLVGMYAKCGSIEDARKVFDRMRQQDSASLSAMIVGYAINGCSKESLEL 476
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLLS 479
F ++ +G +PD ++F+ LSAC HAG + G ++FD+M +Y + P+++HY CM+DLL
Sbjct: 477 FEQMQFTGLKPDRVTFVGVLSACCHAGLVDEGRQYFDIMTRFYHITPAMEHYGCMIDLLG 536
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
RAG EA + I K+P+ PD+ MWG+LL C +H N++ G+ A LI L P N YV+
Sbjct: 537 RAGCFDEANDLINKMPIKPDADMWGSLLSACRTHNNIDLGEKVAQHLIALNPQNPAPYVL 596
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKF 583
L+N++A AGRW D+ R +MKDR++ K GCSWI + ++H F
Sbjct: 597 LSNIYAAAGRWDDIGSVRNRMKDRKVKKKLGCSWIVIKKQVHAF 640
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 155/308 (50%), Gaps = 18/308 (5%)
Query: 213 EAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQ-SDTFVGGA 271
EA + +D++ +GI P S T+ S+L C + SL K +HA I + D +G
Sbjct: 47 EALHILQDMV-ENGIWPHSSTYDSLLQGCLNAKSLPDAKLLHAHMIQTQFECQDISLGNK 105
Query: 272 LVEMYCRYQDLVAAQMAFDE--IENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLT 329
LV +Y + LV A+ FDE ++N+ + + + + + A+ F EM + +
Sbjct: 106 LVSIYVKLGSLVEARRVFDEMPVKNVVSWTAMIA--AYARHEHGQEALGFFYEMQDVGIQ 163
Query: 330 PDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLA 389
P+ +T IL AC+ L + + H ++ G++S+V +G LVDMYAK G ++ AR
Sbjct: 164 PNHFTFASILPACTDLEVL---GEFHDEIVKGGFESNVFVGNGLVDMYAKRGCIEFAREL 220
Query: 390 YKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSI 449
+ ++ D+VS NAM+ Y +G ++ + F+ I + D I++ + ++ G +
Sbjct: 221 FDKMPQRDVVSWNAMIAGYVQNGLIEDALKLFQEIP----KRDVITWNTMMAGYAQCGDV 276
Query: 450 KTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
+ E F+ M + +L + M+ + G + EA++ + +P + + W A++ G
Sbjct: 277 ENAVELFEKMP----EQNLVSWNTMIAGYVQNGSVKEAFKLFQIMP-ERNVISWNAVISG 331
Query: 510 CVSHGNLE 517
+G +E
Sbjct: 332 FAQNGQVE 339
>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 858
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 223/675 (33%), Positives = 350/675 (51%), Gaps = 118/675 (17%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNS-------------------------------- 28
MY KCG LDD++++F + ER+ VSWN+
Sbjct: 126 MYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPNEFS 185
Query: 29 ---VVTACAA----------NGLVLEALECLERMSS--------------------LDNE 55
++ ACA +GL+L+ L++ S+ D
Sbjct: 186 ISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIA 245
Query: 56 TPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKE 115
P++VSW+A+I G + ++ A+ +L M+ G PN TLSS L ACA + LG++
Sbjct: 246 HPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQ 305
Query: 116 FHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGN 175
H + + S+ F GLVD+Y +C M
Sbjct: 306 LHSSLIKMDAHSDLFAAVGLVDMYSKCEMM------------------------------ 335
Query: 176 VAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFG 235
+AR +D M ++ II+WN++ISGY + +A S+F + D I+ T
Sbjct: 336 -DDARRAYDSMP----KKDIIAWNALISGYSQCGDHLDAVSLFSKMFSED-IDFNQTTLS 389
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
+VL + A + +++ K+IH ++I G+ SD +V +L++ Y + + A F+E
Sbjct: 390 TVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEE-RTW 448
Query: 296 ENLLG--------KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLAT 347
E+L+ DG E A++L+ +M D+ PD + +L+AC++L+
Sbjct: 449 EDLVAYTSMITAYSQYGDGEE-------ALKLYLQMQDADIKPDPFICSSLLNACANLSA 501
Query: 348 MERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTA 407
E+GKQ+H +AI+ G+ D+ +LV+MYAKCGS++ A A+ I +VS +AM+
Sbjct: 502 YEQGKQLHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNRGIVSWSAMIGG 561
Query: 408 YAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKP 466
YA HGHGKE + F ++L G P+HI+ +S L AC HAG + G ++F+ M + +KP
Sbjct: 562 YAQHGHGKEALRLFNQMLRDGVPPNHITLVSVLCACNHAGLVNEGKQYFEKMEVMFGIKP 621
Query: 467 SLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRL 526
+ +HY CM+DLL R+G+L EA E + IP D +WGALLG H N+E GQ AA L
Sbjct: 622 TQEHYACMIDLLGRSGKLNEAVELVNSIPFEADGFVWGALLGAARIHKNIELGQKAAKML 681
Query: 527 IELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRAS 586
+LEP +G +V+LAN++A AG W ++A+ R+ MKD ++ K PG SWIE +D+++ F
Sbjct: 682 FDLEPEKSGTHVLLANIYASAGMWENVAKVRKFMKDSKVKKEPGMSWIEIKDKVYTFIVG 741
Query: 587 DRSHDRSEEIYTIID 601
DRSH RS+EIY +D
Sbjct: 742 DRSHSRSDEIYAKLD 756
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 144/560 (25%), Positives = 247/560 (44%), Gaps = 109/560 (19%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
++VSWS+++ G+ QNG+ EEA+ + M G++ N T SVL AC+ + L++G++ H
Sbjct: 46 DVVSWSSLLSGYVQNGFVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVH 105
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
G GF S+ FV N LV +Y +CG + + ++F +N VS N + Y ++
Sbjct: 106 GMAVVTGFESDGFVANTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCG 165
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
EA LF +M +R GI P F+ +
Sbjct: 166 EAVGLFKEM------------------------------------VRSGIMPNEFSISII 189
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
L ACA + G++IH L + +GL D F ALV+MY + ++ A F +I +
Sbjct: 190 LNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAH--- 246
Query: 298 LLGKMKEDGFEPNVYTWN--------------AMQLFSEMLSLDLTPDIYTVGIILSACS 343
P+V +WN A+ L EM P+++T+ L AC+
Sbjct: 247 -----------PDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACA 295
Query: 344 SLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNA 403
++ E G+Q+H+ I+ SD+ LVDMY+KC + AR AY + D+++ NA
Sbjct: 296 AMGFKELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNA 355
Query: 404 MLTAYAMHGHGKEGIAHFRRILASGFRPDHISF---------LSALSAC--VHAGSIKTG 452
+++ Y+ G + ++ F ++ + + + L A+ C +H SIK+G
Sbjct: 356 LISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSG 415
Query: 453 --SEFFDLMAYYDVKPSLKH------------------YTCMVDLLSRAGELGEA---YE 489
S+F+ + + D H YT M+ S+ G+ EA Y
Sbjct: 416 IYSDFYVINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQYGDGEEALKLYL 475
Query: 490 FIKKIPMAPDSVMWGALLGGCVSHGNLEFGQ------IAADRLIELEPNNTGNYVMLANL 543
++ + PD + +LL C + E G+ I + ++ +N+ L N+
Sbjct: 476 QMQDADIKPDPFICSSLLNACANLSAYEQGKQLHVHAIKFGFMCDIFASNS-----LVNM 530
Query: 544 FAYAGRWSDLARTRQKMKDR 563
+A G D R ++ +R
Sbjct: 531 YAKCGSIEDADRAFSEIPNR 550
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 142/580 (24%), Positives = 243/580 (41%), Gaps = 102/580 (17%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSL-------- 52
+Y KC A+K+ E D VSW+S+++ NG V EAL M L
Sbjct: 25 LYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNGFVEEALLVFNEMCLLGVKCNEFT 84
Query: 53 ------------DNETPNLVSWSAVIGGFTQNGY---------------DE--------- 76
D V AV+ GF +G+ D+
Sbjct: 85 FPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVANTLVVMYAKCGLLDDSRRLFGGIV 144
Query: 77 ---------------------EAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKE 115
EA+G+ M G+ PN ++S +L ACA LQ+ LG++
Sbjct: 145 ERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPNEFSISIILNACAGLQEGDLGRK 204
Query: 116 FHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGN 175
HG + + G + F N LVD+Y + G++ A+ +F + + VS N II G +
Sbjct: 205 IHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAHPDVVSWNAIIAGCVLHDC 264
Query: 176 VAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFG 235
A L D+M+ G P FT
Sbjct: 265 NDLALMLLDEMK------------------------------------GSGTRPNMFTLS 288
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
S L ACA M G+++H+ I + SD F LV+MY + + + A+ A+D +
Sbjct: 289 SALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKK 348
Query: 296 ENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVH 355
+ + G+ +A+ LFS+M S D+ + T+ +L + +SL ++ KQ+H
Sbjct: 349 DIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIH 408
Query: 356 AYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGK 415
+I+ G SD ++ +L+D Y KC + A ++ + DLV+ +M+TAY+ +G G+
Sbjct: 409 TISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQYGDGE 468
Query: 416 EGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMV 475
E + + ++ + +PD S L+AC + + + G + + + +V
Sbjct: 469 EALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQGKQLHVHAIKFGFMCDIFASNSLV 528
Query: 476 DLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
++ ++ G + +A +IP V W A++GG HG+
Sbjct: 529 NMYAKCGSIEDADRAFSEIP-NRGIVSWSAMIGGYAQHGH 567
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 117/409 (28%), Positives = 189/409 (46%), Gaps = 65/409 (15%)
Query: 115 EFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
E H ++ + GF +P + N LV +Y +C +F GY
Sbjct: 2 ELHAHLIKFGFSRDPSLRNHLVTLYSKC----------RRF-------------GY---- 34
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTF 234
AR+L D+ L V +SW+S++SGYV N +EA +F ++ + G++ FTF
Sbjct: 35 ----ARKLVDESSELDV----VSWSSLLSGYVQNGFVEEALLVFNEMCLL-GVKCNEFTF 85
Query: 235 GSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIEN 294
SVL AC+ L G+++H +A+ G +SD FV LV MY + L ++ F I
Sbjct: 86 PSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVANTLVVMYAKCGLLDDSRRLFGGI-- 143
Query: 295 IENLLGKMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILS 340
E NV +WNA+ LF EM+ + P+ +++ IIL+
Sbjct: 144 ------------VERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPNEFSISIILN 191
Query: 341 ACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVS 400
AC+ L + G+++H ++ G D D ALVDMY+K G ++ A ++ I+ PD+VS
Sbjct: 192 ACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAHPDVVS 251
Query: 401 QNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA 460
NA++ +H + + SG RP+ + SAL AC G + G + +
Sbjct: 252 WNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLI 311
Query: 461 YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
D L +VD+ S+ + +A +P D + W AL+ G
Sbjct: 312 KMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMP-KKDIIAWNALISG 359
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 122/262 (46%), Gaps = 1/262 (0%)
Query: 252 EIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNV 311
E+HA I G D + LV +Y + + A+ DE ++ + G+ N
Sbjct: 2 ELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNG 61
Query: 312 YTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGT 371
+ A+ +F+EM L + + +T +L ACS + G++VH A+ G++SD +
Sbjct: 62 FVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVAN 121
Query: 372 ALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRP 431
LV MYAKCG L +R + I ++VS NA+ + Y E + F+ ++ SG P
Sbjct: 122 TLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMP 181
Query: 432 DHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFI 491
+ S L+AC G + LM + +VD+ S+AGE+ A
Sbjct: 182 NEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVF 241
Query: 492 KKIPMAPDSVMWGALLGGCVSH 513
+ I PD V W A++ GCV H
Sbjct: 242 QDIA-HPDVVSWNAIIAGCVLH 262
>gi|255586261|ref|XP_002533783.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526284|gb|EEF28596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 672
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 221/667 (33%), Positives = 339/667 (50%), Gaps = 102/667 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWN--------------------------------- 27
+Y + G ++DA+++F MP +DCV WN
Sbjct: 16 LYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVFEDMRNCQTKPNSIT 75
Query: 28 --SVVTACAA----------NGLVLE--------ALECLERMSS----------LDNETP 57
SV++ CA+ +GLV+ L M S L N P
Sbjct: 76 FASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKFGQLSDALKLFNTMP 135
Query: 58 --NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKE 115
N+V+W+ +I GF QNG+ +EA + M + G+ P++ T +S LP+ L GKE
Sbjct: 136 DTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFLPSVTESASLKQGKE 195
Query: 116 FHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGN 175
HGYI R+G + F+ + L+D+Y +C D+ A KIF + + + V C II
Sbjct: 196 IHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDIVVCTAII-------- 247
Query: 176 VAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFG 235
SGYV N L ++A +FR L+ + + P + T
Sbjct: 248 ---------------------------SGYVLNGLNNDALEIFR-WLLEEKMSPNAVTLA 279
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
SVL ACA + +L GKE+HA + GL VG A+++MY + L A F +
Sbjct: 280 SVLPACAGLATLNLGKELHANILKHGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEK 339
Query: 296 ENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVH 355
+ + N A+ LF +M L+ D ++ LSAC++L + GK +H
Sbjct: 340 DAVCWNAIITNCSQNGKPQEAIDLFRQMGREGLSYDCVSISAALSACANLPALHHGKAIH 399
Query: 356 AYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGK 415
++ I+ +DS+V +AL+DMY KCG+L AR + + + VS N+++ AY HGH +
Sbjct: 400 SFMIKGAFDSEVFAESALIDMYGKCGNLSVARCVFDMMREKNEVSWNSIIAAYGSHGHLE 459
Query: 416 EGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCM 474
+A F ++L G +PDH++FL+ LSAC HAG + G ++F M Y + ++HY C+
Sbjct: 460 VSLALFHKMLEDGIQPDHVTFLTILSACGHAGQVDKGIQYFRCMTEEYGIPARMEHYACI 519
Query: 475 VDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNT 534
VDL RAG L EA+E IK +P +PD +WG LLG C HGN+E ++A+ L++L+P N+
Sbjct: 520 VDLFGRAGRLNEAFETIKNMPFSPDDGVWGTLLGACRVHGNVELAEVASRCLLDLDPENS 579
Query: 535 GNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSE 594
G YV+L+N+ A AG+W + + R MK R + K PG SWIE H F A+D SH S
Sbjct: 580 GCYVLLSNVHADAGQWGSVRKIRSLMKKRGVQKVPGYSWIEVNKTTHMFVAADGSHPESA 639
Query: 595 EIYTIID 601
+IY++++
Sbjct: 640 QIYSVLN 646
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 130/259 (50%), Gaps = 9/259 (3%)
Query: 260 LGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGF----EPNVYTWN 315
+G D FVG +L+++Y + A+ FD++ N + +L + +GF EPN +
Sbjct: 1 MGFNVDEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPN----S 56
Query: 316 AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVD 375
A+++F +M + P+ T +LS C+S A E G Q+H I CG+ D + ALV
Sbjct: 57 AVKVFEDMRNCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVA 116
Query: 376 MYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHIS 435
MY+K G L A + + ++V+ N M+ + +G E F ++++G PD I+
Sbjct: 117 MYSKFGQLSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSIT 176
Query: 436 FLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIP 495
F S L + + S+K G E + + + + + ++D+ + ++G A + K+
Sbjct: 177 FASFLPSVTESASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQ-S 235
Query: 496 MAPDSVMWGALLGGCVSHG 514
D V+ A++ G V +G
Sbjct: 236 TNVDIVVCTAIISGYVLNG 254
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 79/168 (47%), Gaps = 5/168 (2%)
Query: 362 GYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHF 421
G++ D +G++L+ +YA+ G ++ AR + ++ D V N ML + G + F
Sbjct: 2 GFNVDEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVF 61
Query: 422 RRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY--YDVKPSLKHYTCMVDLLS 479
+ +P+ I+F S LS C + G++ L+ + P + + +V + S
Sbjct: 62 EDMRNCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVAN--ALVAMYS 119
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLI 527
+ G+L +A + +P + V W ++ G V +G ++ + +I
Sbjct: 120 KFGQLSDALKLFNTMP-DTNVVTWNGMIAGFVQNGFMDEASLLFSEMI 166
>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
Length = 906
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 208/619 (33%), Positives = 344/619 (55%), Gaps = 59/619 (9%)
Query: 34 AANGLVLEALECLERMSS--LDNETP--NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEG 89
AN LV+ +C E + S L +E P N+VSW+A+ + Q + EA+G+ + M G
Sbjct: 194 VANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSG 253
Query: 90 LEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSAL 149
++PN +LSS++ AC L+ S GK HGY+ + G+ +PF N LVD+Y + GD+ A+
Sbjct: 254 IKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAI 313
Query: 150 KIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQME---------------------- 187
+F K + VS N +I G + + +A EL QM+
Sbjct: 314 SVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRQLHSSLMKMDMESDLFVSVGL 373
Query: 188 -----------------HLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPT 230
+L ++ +I+WN++ISGY EA S+F ++ ++GI
Sbjct: 374 VDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEM-HKEGIGFN 432
Query: 231 SFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFD 290
T ++L + A + + +++H L++ G SD +V +L++ Y + + A+ F+
Sbjct: 433 QTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFE 492
Query: 291 EIENIENLLGKMKEDGFEPNVYTW-------NAMQLFSEMLSLDLTPDIYTVGIILSACS 343
E I +L+ F + + A++LF EM ++L PD + +L+AC+
Sbjct: 493 EC-TIGDLVS------FTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACA 545
Query: 344 SLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNA 403
+L+ E+GKQ+H + ++ G+ D+ G +LV+MYAKCGS+ A A+ ++ +VS +A
Sbjct: 546 NLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSA 605
Query: 404 MLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YY 462
M+ A HGHG++ + F ++L G P+HI+ +S L AC HAG + +F+ M +
Sbjct: 606 MIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELF 665
Query: 463 DVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIA 522
KP +HY CM+DLL RAG++ EA E + K+P ++ +WGALLG H ++E G+ A
Sbjct: 666 GFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGAARIHKDVELGRRA 725
Query: 523 ADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHK 582
A+ L LEP +G +V+LAN++A AG+W ++A R+ M+D ++ K PG SWIE +D+++
Sbjct: 726 AEMLFILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKKEPGMSWIEVKDKVYT 785
Query: 583 FRASDRSHDRSEEIYTIID 601
F DRSH RS+EIY +D
Sbjct: 786 FLVGDRSHYRSQEIYAKLD 804
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 133/501 (26%), Positives = 234/501 (46%), Gaps = 39/501 (7%)
Query: 53 DNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSL 112
++ P+LVSWSA+I G+ QNG A+ M G++ N T SSVL AC+ ++ L +
Sbjct: 116 ESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRI 175
Query: 113 GKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCE 172
GK+ HG + +GF + FV N LV +Y +C + L + ++F + +N VS N + Y +
Sbjct: 176 GKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQ 235
Query: 173 NGNVAEARELFDQMEHLGVQRGIISWNSM---------------ISGYVDNSLYD----- 212
EA LF +M G++ S +SM I GY+ YD
Sbjct: 236 XDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFS 295
Query: 213 ---------------EAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKG---KEIH 254
+A S+F + D + + G VL + G +++H
Sbjct: 296 ANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRQLH 355
Query: 255 ALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTW 314
+ + + ++SD FV LV+MY + L A+MAF+ + + + G+
Sbjct: 356 SSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDM 415
Query: 315 NAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALV 374
A+ LF EM + + T+ IL + + L + +QVH +++ G+ SD+++ +L+
Sbjct: 416 EALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLI 475
Query: 375 DMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHI 434
D Y KC ++ A ++ + DLVS +M+TAYA +G G+E + F + +PD
Sbjct: 476 DSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRF 535
Query: 435 SFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKI 494
S L+AC + + + G + + Y + +V++ ++ G + +A ++
Sbjct: 536 VCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSEL 595
Query: 495 PMAPDSVMWGALLGGCVSHGN 515
V W A++GG HG+
Sbjct: 596 T-ERGIVSWSAMIGGLAQHGH 615
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 119/459 (25%), Positives = 195/459 (42%), Gaps = 92/459 (20%)
Query: 65 VIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNG 124
+I Q D + +L + P + + S +L C + L G + H +IT++G
Sbjct: 27 LIQTVPQFSEDPQTTAILNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSG 86
Query: 125 FMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFD 184
+P + N L+++Y +C A K+ + S + VS + +I GY +NG A F
Sbjct: 87 LSDDPSIRNHLINLYSKCRXFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFH 146
Query: 185 QMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADM 244
+M LGV+ FTF SVL AC+ +
Sbjct: 147 EMHLLGVK------------------------------------CNEFTFSSVLKACSIV 170
Query: 245 NSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKE 304
LR GK++H + + G + D FV LV MY + + + ++ FDEI
Sbjct: 171 KDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIP----------- 219
Query: 305 DGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSSLATMER 350
E NV +WNA+ LF EM+ + P+ +++ +++AC+ L R
Sbjct: 220 ---ERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSR 276
Query: 351 GKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAM 410
GK +H Y I+ GYD D ALVDMYAK G L A +++I PD+VS NA++ +
Sbjct: 277 GKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVL 336
Query: 411 HGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKH 470
H H ++ + L + +H+ +K D++ L
Sbjct: 337 HEHHEQA----------------LELLGQMKRQLHSSLMKM-----------DMESDLFV 369
Query: 471 YTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
+VD+ S+ L +A +P D + W A++ G
Sbjct: 370 SVGLVDMYSKCDLLEDARMAFNLLP-EKDLIAWNAIISG 407
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 141/317 (44%), Gaps = 23/317 (7%)
Query: 212 DEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGA 271
D + +L+ + PTS ++ +L C SLR G +IHA GL D +
Sbjct: 37 DPQTTAILNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNH 96
Query: 272 LVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPD 331
L+ +Y + + A+ DE + + G+ N A+ F EM L + +
Sbjct: 97 LINLYSKCRXFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCN 156
Query: 332 IYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYK 391
+T +L ACS + + GKQVH + G++ DV + LV MYAKC ++ +
Sbjct: 157 EFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFD 216
Query: 392 RISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSAC-------- 443
I ++VS NA+ + Y E + F ++ SG +P+ S S ++AC
Sbjct: 217 EIPERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSR 276
Query: 444 ---VHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDS 500
+H IK G YD P +VD+ ++ G+L +A +KI PD
Sbjct: 277 GKIIHGYLIKLG---------YDWDPF--SANALVDMYAKVGDLADAISVFEKIKQ-PDI 324
Query: 501 VMWGALLGGCVSHGNLE 517
V W A++ GCV H + E
Sbjct: 325 VSWNAVIAGCVLHEHHE 341
>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 201/602 (33%), Positives = 338/602 (56%), Gaps = 42/602 (6%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETP-NLV 60
+ +++ ++V ++ + S+N+VV + + V + C +++ D T +++
Sbjct: 261 FAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKL--FDELTDRDVI 318
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+++I G+ +NG D+ I + +M G++ + T+ +V ACA + L LGK H Y
Sbjct: 319 SWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYS 378
Query: 121 TRNGFMSNPFVVNG-LVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ + N L+D+Y +CGD+ SA+++
Sbjct: 379 IKAATLDREVRFNNTLLDMYSKCGDLNSAIRV---------------------------- 410
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
F++M+ ++ ++SW SMI+GYV L D A +F ++ R G+ P + S+L
Sbjct: 411 ---FERMD----EKTVVSWTSMITGYVREGLSDGAIKLFDEMKSR-GVVPDVYAVTSILN 462
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
ACA +L+ GK +H L++++FV AL +MY + + A F ++ + +
Sbjct: 463 ACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMKKKDVIS 522
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
G+ N A+ LF+EM + PD TV IL AC+SLA +++G+++H YA+
Sbjct: 523 WNTMIGGYTKNSLPNEALTLFAEM-QRESKPDGTTVACILPACASLAALDKGREIHGYAL 581
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
R GY D ++ A+VDMY KCG L AR + I DLVS M+ Y MHG+G E I
Sbjct: 582 RNGYSEDKYVTNAVVDMYVKCGLLVLARSLFDMIPNKDLVSWTVMIAGYGMHGYGSEAIN 641
Query: 420 HFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYY-DVKPSLKHYTCMVDLL 478
F ++ +G PD +SF+S L AC H+G + G + F++M ++P+L+HY CMVDLL
Sbjct: 642 TFNQMRMTGIEPDEVSFISILYACSHSGLLDEGWKIFNIMKKECQIEPNLEHYACMVDLL 701
Query: 479 SRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYV 538
+R G L +A++FIK +P+ PD+ +WGALL GC H +++ + A+R+ ELEP NTG YV
Sbjct: 702 ARTGNLVKAHKFIKAMPIKPDATIWGALLCGCRIHHDVKLAEKVAERIFELEPENTGYYV 761
Query: 539 MLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYT 598
+LAN++A A +W ++ + R+K+ R + K+PGCSWIE + +I+ F A D S ++++I
Sbjct: 762 LLANIYAEAEKWEEVQKLRKKIGQRGLKKNPGCSWIEIKGKINIFVAGDCSKPQAKKIEL 821
Query: 599 II 600
++
Sbjct: 822 LL 823
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 134/538 (24%), Positives = 225/538 (41%), Gaps = 83/538 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG L + + VF + E WN +++
Sbjct: 194 MYVKCGDLKEGRMVFDKLSESKIFLWNLMISE---------------------------- 225
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
++ +G E+I + +M G++PN+ T SS+L A + ++ G++ HG I
Sbjct: 226 --------YSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHGLI 277
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ GF S VVN L+ Y + A K+F + + ++ +S N++I GY +NG
Sbjct: 278 CKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGI 337
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
E+F +M GV I +M+ +V +A
Sbjct: 338 EIFIKMLVFGVD---IDLATMV---------------------------------NVFVA 361
Query: 241 CADMNSLRKGKEIHALAI-ALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
CA++ +L GK +H+ +I A L + L++MY + DL +A F+ ++ +
Sbjct: 362 CANIGTLLLGKVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVS 421
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
G+ + A++LF EM S + PD+Y V IL+AC+ ++ GK VH Y
Sbjct: 422 WTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIR 481
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
+++ + AL DMYAKCGS+K A + + D++S N M+ Y + E +
Sbjct: 482 ENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALT 541
Query: 420 HFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLS 479
F + +PD + L AC ++ G E +VD+
Sbjct: 542 LFAEMQRES-KPDGTTVACILPACASLAALDKGREIHGYALRNGYSEDKYVTNAVVDMYV 600
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAAD-----RLIELEPN 532
+ G L A IP D V W ++ G HG +G A + R+ +EP+
Sbjct: 601 KCGLLVLARSLFDMIP-NKDLVSWTVMIAGYGMHG---YGSEAINTFNQMRMTGIEPD 654
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 116/413 (28%), Positives = 180/413 (43%), Gaps = 75/413 (18%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG L+ A +VF+ M E+ VSW S++T
Sbjct: 397 MYSKCGDLNSAIRVFERMDEKTVVSWTSMIT----------------------------- 427
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
G+ + G + AI + M++ G+ P+ ++S+L ACA L GK H YI
Sbjct: 428 -------GYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYI 480
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
N +N FV N L D+Y +CG M A +FS K+ +S NT+I GY +N
Sbjct: 481 RENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKN------- 533
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
SL +EA ++F + M+ +P T +L A
Sbjct: 534 ----------------------------SLPNEALTLFAE--MQRESKPDGTTVACILPA 563
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA + +L KG+EIH A+ G D +V A+V+MY + LV A+ FD I N + +
Sbjct: 564 CASLAALDKGREIHGYALRNGYSEDKYVTNAVVDMYVKCGLLVLARSLFDMIPNKDLVSW 623
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG-KQVHAYAI 359
+ G+ + Y A+ F++M + PD + IL ACS ++ G K +
Sbjct: 624 TVMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVSFISILYACSHSGLLDEGWKIFNIMKK 683
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNAMLTAYAMH 411
C + ++ +VD+ A+ G+L A K + PD A+L +H
Sbjct: 684 ECQIEPNLEHYACMVDLLARTGNLVKAHKFIKAMPIKPDATIWGALLCGCRIH 736
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 117/465 (25%), Positives = 205/465 (44%), Gaps = 44/465 (9%)
Query: 46 LERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACA 105
LE S +D E + S I F + G + A+ +L Q + A S+L CA
Sbjct: 108 LETKSYMDVELDS----SRKIVEFCEVGDLKNAMELLCSSQNSNFDLGA--YCSILQLCA 161
Query: 106 RLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNT 165
+ + G+ I +G M + + LV +Y +CGD+ +F K S N
Sbjct: 162 ERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNL 221
Query: 166 IIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRD 225
+I Y +GN E+ LF QM L
Sbjct: 222 MISEYSGSGNYGESINLFKQMLEL------------------------------------ 245
Query: 226 GIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAA 285
GI+P S+TF S+L A + + +G+++H L LG S V +L+ Y + + A
Sbjct: 246 GIKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCA 305
Query: 286 QMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSL 345
Q FDE+ + + + G+ N +++F +ML + D+ T+ + AC+++
Sbjct: 306 QKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANI 365
Query: 346 ATMERGKQVHAYAIRCG-YDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAM 404
T+ GK +H+Y+I+ D +V L+DMY+KCG L A ++R+ +VS +M
Sbjct: 366 GTLLLGKVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSM 425
Query: 405 LTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDV 464
+T Y G I F + + G PD + S L+AC G++K+G D + ++
Sbjct: 426 ITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNL 485
Query: 465 KPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
+ + + D+ ++ G + +A++ + D + W ++GG
Sbjct: 486 ETNSFVSNALTDMYAKCGSMKDAHDVFSHMK-KKDVISWNTMIGG 529
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/373 (23%), Positives = 168/373 (45%), Gaps = 50/373 (13%)
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
+ S+L CA+ S+R G+ + ++ + G+ D +G LV MY + DL +M FD++
Sbjct: 153 YCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLS 212
Query: 294 NIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ 353
+ L + + + ++ LF +ML L + P+ YT IL +++A +E G+Q
Sbjct: 213 ESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQ 272
Query: 354 VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGH 413
VH + G++S + +L+ Y ++ A+ + ++ D++S N+M++ Y +G
Sbjct: 273 VHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGL 332
Query: 414 GKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPS-----L 468
GI F ++L G D + ++ AC + G++ G ++ Y +K + +
Sbjct: 333 DDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGK----VLHSYSIKAATLDREV 388
Query: 469 KHYTCMVDLLSRAGELGEA----------------------------------YEFIKKI 494
+ ++D+ S+ G+L A ++ +K
Sbjct: 389 RFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSR 448
Query: 495 PMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNN--TGNYV--MLANLFAYAGRW 550
+ PD ++L C +GNL+ G+I D + E NN T ++V L +++A G
Sbjct: 449 GVVPDVYAVTSILNACAINGNLKSGKIVHDYIRE---NNLETNSFVSNALTDMYAKCGSM 505
Query: 551 SDLARTRQKMKDR 563
D MK +
Sbjct: 506 KDAHDVFSHMKKK 518
>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 204/598 (34%), Positives = 318/598 (53%), Gaps = 74/598 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
Y K +D A+KVF M ERD +SWNS++ +NGL
Sbjct: 239 FYLKNHRVDSARKVFDEMTERDVISWNSIINGYVSNGLA--------------------- 277
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
E+ + + +M G+E + T+ SV CA + +SLG+ H +
Sbjct: 278 ---------------EKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFG 322
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ F N L+D+Y +CGD+ SA +F + S ++ VS ++I GY G EA
Sbjct: 323 VKACFSREDRFCNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAV 382
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+LF++ME G I P +T +VL
Sbjct: 383 KLFEEMEEEG------------------------------------ISPDVYTVTAVLNC 406
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA L +GK +H + D FV AL++MY + + A++ F E+ + +
Sbjct: 407 CARNRLLDEGKRVHEWIKENDMGFDIFVSNALMDMYAKCGSMREAELVFSEMRVKDIISW 466
Query: 301 KMKEDGFEPNVYTWNAMQLFSEML-SLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
G+ N Y A+ LF+ +L +PD TV +L AC+SL+ ++G+++H Y +
Sbjct: 467 NTVIGGYSKNCYANEALSLFNLLLVEKRFSPDERTVACVLPACASLSAFDKGREIHGYIM 526
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
R GY SD H+ +LVDMYAKCG+L ARL + I++ DLVS M+ Y MHG GKE IA
Sbjct: 527 RNGYFSDRHVANSLVDMYAKCGALLLARLLFDDITSKDLVSWTVMIAGYGMHGFGKEAIA 586
Query: 420 HFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYY-DVKPSLKHYTCMVDLL 478
F ++ +G PD ISF+S L AC H+G + G FF++M + ++P+++HY C+VD+L
Sbjct: 587 LFNQMRQAGIEPDEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDML 646
Query: 479 SRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYV 538
+R G L +AY FI+ +P+ PD+ +WGALL GC H +++ + A+++ ELEP NTG YV
Sbjct: 647 ARTGNLSKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAERVAEKVFELEPENTGYYV 706
Query: 539 MLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEI 596
++AN++A A +W ++ R R+++ R + K+PGCSWIE + ++ F A D S+ +E+I
Sbjct: 707 LMANIYAEAEKWEEVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETEKI 764
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/441 (22%), Positives = 196/441 (44%), Gaps = 39/441 (8%)
Query: 69 FTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSN 128
F ++G + A+ +L ++P RTL SVL CA + L GKE +I NGF+ +
Sbjct: 71 FCESGNLKNAVKLLHVSGKWDIDP--RTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVLD 128
Query: 129 PFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEH 188
+ + L +Y CGD+ EA +FDQ++
Sbjct: 129 SNLGSKLALMYTNCGDL-------------------------------KEASRVFDQVK- 156
Query: 189 LGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLR 248
+++ + WN +++ + + + +F+ + M G+E S+TF V + + + S+
Sbjct: 157 --IEKALF-WNILMNELAKSGDFSGSIGLFKKM-MSSGVEMDSYTFSCVSKSFSSLRSVN 212
Query: 249 KGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFE 308
G+++H + G VG +LV Y + + +A+ FDE+ + + +G+
Sbjct: 213 GGEQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYV 272
Query: 309 PNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVH 368
N + +F +ML + D+ T+ + + C+ + G+ VH + ++ + +
Sbjct: 273 SNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDR 332
Query: 369 IGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASG 428
L+DMY+KCG L A++ ++ +S +VS +M+ YA G E + F + G
Sbjct: 333 FCNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEG 392
Query: 429 FRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAY 488
PD + + L+ C + G + + D+ + ++D+ ++ G + EA
Sbjct: 393 ISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNALMDMYAKCGSMREA- 451
Query: 489 EFIKKIPMAPDSVMWGALLGG 509
E + D + W ++GG
Sbjct: 452 ELVFSEMRVKDIISWNTVIGG 472
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 92/207 (44%), Gaps = 7/207 (3%)
Query: 315 NAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALV 374
NA++L D+ P T+ +L C+ +++ GK+V + G+ D ++G+ L
Sbjct: 79 NAVKLLHVSGKWDIDP--RTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVLDSNLGSKLA 136
Query: 375 DMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHI 434
MY CG LK A + ++ + N ++ A G I F+++++SG D
Sbjct: 137 LMYTNCGDLKEASRVFDQVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSY 196
Query: 435 SFLSALSACVHAGSIKTGSEF--FDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIK 492
+F + S+ G + + L + + + S+ + +V + + A +
Sbjct: 197 TFSCVSKSFSSLRSVNGGEQLHGYILKSGFGERNSVGN--SLVAFYLKNHRVDSARKVFD 254
Query: 493 KIPMAPDSVMWGALLGGCVSHGNLEFG 519
++ D + W +++ G VS+G E G
Sbjct: 255 EMT-ERDVISWNSIINGYVSNGLAEKG 280
>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 809
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 204/602 (33%), Positives = 325/602 (53%), Gaps = 73/602 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC +++A+KVF MPERD LV
Sbjct: 179 MYAKCRQVNEARKVFDRMPERD------------------------------------LV 202
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ ++ G++QNG A+ M+ M E L+P+ T+ SVLPA + L+ +S+GKE HGY
Sbjct: 203 SWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYA 262
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R+GF S + LVD+Y +CG + +A R
Sbjct: 263 MRSGFDSLVNISTALVDMYAKCGSLETA-------------------------------R 291
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+LFD M ++R ++SWNSMI YV N EA +F+ +L +G++PT + L A
Sbjct: 292 QLFDGM----LERNVVSWNSMIDAYVQNENPKEAMLIFQKML-DEGVKPTDVSVMGALHA 346
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CAD+ L +G+ IH L++ LGL + V +L+ MYC+ +++ A F ++++ +
Sbjct: 347 CADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSW 406
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
GF N +A+ FS+M S + PD +T +++A + L+ K +H +R
Sbjct: 407 NAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMR 466
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
D +V + TALVDMYAKCG++ ARL + +S + + NAM+ Y HG GK +
Sbjct: 467 SCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALEL 526
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLLS 479
F + +P+ ++FLS +SAC H+G ++ G + F +M Y ++ S+ HY MVDLL
Sbjct: 527 FEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLG 586
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
RAG L EA++FI ++P+ P ++GA+LG C H N+ F + AA+RL EL P++ G +V+
Sbjct: 587 RAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVL 646
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTI 599
LAN++ A W + + R M + + K+PGCS +E ++E+H F + +H S++IY
Sbjct: 647 LANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAF 706
Query: 600 ID 601
++
Sbjct: 707 LE 708
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 103/346 (29%), Positives = 174/346 (50%), Gaps = 8/346 (2%)
Query: 170 YCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMR-DGIE 228
+C G+V EA +F+ ++ + + +++M+ G+ S D+A F + MR D +E
Sbjct: 79 FCRYGSVDEAARVFEPID----SKLNVLYHTMLKGFAKVSDLDKALQFF--VRMRYDDVE 132
Query: 229 PTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMA 288
P + F +L C D LR GKEIH L + G D F L MY + + + A+
Sbjct: 133 PVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKV 192
Query: 289 FDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATM 348
FD + + + G+ N A+++ M +L P T+ +L A S+L +
Sbjct: 193 FDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLI 252
Query: 349 ERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAY 408
GK++H YA+R G+DS V+I TALVDMYAKCGSL+ AR + + ++VS N+M+ AY
Sbjct: 253 SVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAY 312
Query: 409 AMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSL 468
+ + KE + F+++L G +P +S + AL AC G ++ G L + ++
Sbjct: 313 VQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNV 372
Query: 469 KHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
++ + + E+ A K+ + V W A++ G +G
Sbjct: 373 SVVNSLISMYCKCKEVDTAASMFGKL-QSRTLVSWNAMILGFAQNG 417
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 127/284 (44%), Gaps = 1/284 (0%)
Query: 245 NSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKE 304
+SL++ ++I L GL + F LV ++CRY + A F+ I++ N+L
Sbjct: 48 SSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTML 107
Query: 305 DGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYD 364
GF A+Q F M D+ P +Y +L C A + GK++H ++ G+
Sbjct: 108 KGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFS 167
Query: 365 SDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRI 424
D+ T L +MYAKC + AR + R+ DLVS N ++ Y+ +G + + + +
Sbjct: 168 LDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSM 227
Query: 425 LASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGEL 484
+P I+ +S L A I G E + T +VD+ ++ G L
Sbjct: 228 CEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSL 287
Query: 485 GEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIE 528
A + + + + V W +++ V + N + + ++++
Sbjct: 288 ETARQLFDGM-LERNVVSWNSMIDAYVQNENPKEAMLIFQKMLD 330
>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g39620-like [Vitis vinifera]
Length = 1005
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 208/601 (34%), Positives = 313/601 (52%), Gaps = 74/601 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG + AK++F + RD LV
Sbjct: 373 MYAKCGETEKAKQLFWGLQGRD------------------------------------LV 396
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+WSA+I Q GY EEA+ + MQ + ++PN TL S+LPACA L L LGK H +
Sbjct: 397 AWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFT 456
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ S+ LV +Y +CG +AL F++ S
Sbjct: 457 VKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMS------------------------ 492
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
R I++WNS+I+GY A MF L + I P + T V+ A
Sbjct: 493 -----------SRDIVTWNSLINGYAQIGDPYNAIDMFYKLRL-SAINPDAGTMVGVVPA 540
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN-LL 299
CA +N L +G IH L + LG +SD V AL++MY + L +A+ F++ + ++ +
Sbjct: 541 CALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVT 600
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
+ + N + A+ F +M + P+ T +L A + LA G HA I
Sbjct: 601 WNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACII 660
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
+ G+ S+ +G +L+DMYAKCG L ++ + + D VS NAML+ YA+HGHG IA
Sbjct: 661 QMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIA 720
Query: 420 HFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLL 478
F + S + D +SF+S LSAC HAG ++ G + F M+ Y +KP L+HY CMVDLL
Sbjct: 721 LFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLL 780
Query: 479 SRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYV 538
RAG E FIK +P+ PD+ +WGALLG C H N++ G++A D L++LEP N ++V
Sbjct: 781 GRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFV 840
Query: 539 MLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYT 598
+L++++A +GRW+D + R KM D + K+PGCSW+E ++++H FR D+SH + E ++
Sbjct: 841 VLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLESMHL 900
Query: 599 I 599
+
Sbjct: 901 L 901
Score = 208 bits (529), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 143/539 (26%), Positives = 233/539 (43%), Gaps = 82/539 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G L A++VF MP+RD +V
Sbjct: 173 MYSKMGDLKRAREVFDKMPKRD------------------------------------VV 196
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+A+I G +Q+ EA+ MQ G+EP++ +L ++ P +L + L + HGY+
Sbjct: 197 AWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYV 256
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R F S V NGL+D+Y +CGD V AR
Sbjct: 257 FRRDFSSA--VSNGLIDLYSKCGD-------------------------------VDVAR 283
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+FDQM V + +SW +M++GY N + E +F D + + + S +A
Sbjct: 284 RVFDQM----VDQDDVSWGTMMAGYAHNGCFVEVLELF-DKMKLGNVRINKVSAVSAFLA 338
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
A+ L KGKEIH A+ + SD V L+ MY + + A+ F ++ + +
Sbjct: 339 AAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAW 398
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
Y A+ LF EM + + P+ T+ IL AC+ L+ ++ GK +H + ++
Sbjct: 399 SAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVK 458
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
DSD+ GTALV MYAKCG A + R+S+ D+V+ N+++ YA G I
Sbjct: 459 ADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDM 518
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSR 480
F ++ S PD + + + AC + G+ L+ + ++D+ ++
Sbjct: 519 FYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAK 578
Query: 481 AGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE-----FGQIAADRLIELEPNNT 534
G L A K D V W ++ + +G+ + F Q+ RL PN+
Sbjct: 579 CGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQM---RLENFHPNSV 634
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 112/460 (24%), Positives = 211/460 (45%), Gaps = 41/460 (8%)
Query: 57 PNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEF 116
P+ + W+++I +T++ EA+ M + M +GLEP+ T + VL AC L G F
Sbjct: 92 PSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWF 151
Query: 117 HGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNV 176
HG I R G + F+ GLVD+Y + GD+ A ++F K ++ V+ N +I G ++ +
Sbjct: 152 HGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDP 211
Query: 177 AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGS 236
EA + F M+ +GV EP+S + +
Sbjct: 212 CEAVDFFRSMQLVGV------------------------------------EPSSVSLLN 235
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
+ ++++ + IH S V L+++Y + D+ A+ FD++ + +
Sbjct: 236 LFPGICKLSNIELCRSIHGYVFRRDFSSA--VSNGLIDLYSKCGDVDVARRVFDQMVDQD 293
Query: 297 NLLGKMKEDGFEPNVYTWNAMQLFSEM-LSLDLTPDIYTVGIILSACSSLATMERGKQVH 355
++ G+ N ++LF +M L + V L+A ++ +E+GK++H
Sbjct: 294 DVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETI-DLEKGKEIH 352
Query: 356 AYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGK 415
A++ DSD+ + T L+ MYAKCG + A+ + + DLV+ +A++ A G+ +
Sbjct: 353 GCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPE 412
Query: 416 EGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMV 475
E ++ F+ + +P+ ++ +S L AC +K G D+ L T +V
Sbjct: 413 EALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALV 472
Query: 476 DLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
+ ++ G A ++ + D V W +L+ G G+
Sbjct: 473 SMYAKCGFFTAALTTFNRMS-SRDIVTWNSLINGYAQIGD 511
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 106/423 (25%), Positives = 182/423 (43%), Gaps = 19/423 (4%)
Query: 95 RTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSK 154
R+ +S+ A + LS + Y+ +S+ +N L+ ++ A I S
Sbjct: 9 RSFTSIATAASEFPSLS-SSTYTNYLHYPRLLSSCKHLNPLLQIH--------AQIIVSG 59
Query: 155 FSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEA 214
F K+ S +I Y AR +FD + I WNSMI Y + Y+EA
Sbjct: 60 F--KHHHSITHLINLYSLFHKCDLARSVFDSTPN----PSRILWNSMIRAYTRSKQYNEA 113
Query: 215 FSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVE 274
M+ ++ G+EP +TF VL AC +L++G H GL+ D F+G LV+
Sbjct: 114 LEMYY-CMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVD 172
Query: 275 MYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYT 334
MY + DL A+ FD++ + + G + A+ F M + + P +
Sbjct: 173 MYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVS 232
Query: 335 VGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS 394
+ + L+ +E + +H Y R + S V G L+D+Y+KCG + AR + ++
Sbjct: 233 LLNLFPGICKLSNIELCRSIHGYVFRRDFSSAVSNG--LIDLYSKCGDVDVARRVFDQMV 290
Query: 395 TPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSE 454
D VS M+ YA +G E + F ++ R + +S +SA A ++ G E
Sbjct: 291 DQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKE 350
Query: 455 FFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
+ + T ++ + ++ GE +A + + D V W A++ V G
Sbjct: 351 IHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGL-QGRDLVAWSAIIAALVQTG 409
Query: 515 NLE 517
E
Sbjct: 410 YPE 412
>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 989
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 206/631 (32%), Positives = 341/631 (54%), Gaps = 71/631 (11%)
Query: 6 GSLDDAKKVFKMMP----ERDCVSWNSVVTACAANG--------------------LVLE 41
G D A ++F+ M + DCV+ S+++ACA+ G L++E
Sbjct: 293 GFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIE 352
Query: 42 A------LECLERMSS----LDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLE 91
++C + ++ L ET N+V W+ ++ + Q G E+ + +MQ EGL
Sbjct: 353 GSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLM 412
Query: 92 PNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKI 151
PN T S+L C L L LG++ H + ++GF N +V + L+D+Y +
Sbjct: 413 PNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAK---------- 462
Query: 152 FSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLY 211
+G + AR + ++ + ++SW +MI+GY + L+
Sbjct: 463 ---------------------HGELDTARGILQRLR----EEDVVSWTAMIAGYTQHDLF 497
Query: 212 DEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGA 271
EA +F+++ GI + F S + ACA + +L +G++IHA + G D +G A
Sbjct: 498 AEALKLFQEM-ENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIGNA 556
Query: 272 LVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPD 331
LV +Y R A +AF++I+ +N+ GF + + A+Q+FS+M + +
Sbjct: 557 LVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSGHCEEALQVFSQMNQAGVEAN 616
Query: 332 IYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYK 391
++T G +SA ++ A +++GKQ+HA I+ GYDS+ L+ +Y+KCGS++ A+ +
Sbjct: 617 LFTFGSAVSATANTANIKQGKQIHAMMIKTGYDSETEASNVLITLYSKCGSIEDAKREFF 676
Query: 392 RISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKT 451
+ ++VS NAM+T Y+ HG+G E ++ F + G P+H++F+ LSAC H G +
Sbjct: 677 EMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLMPNHVTFVGVLSACSHVGLVNE 736
Query: 452 GSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGC 510
G +F M+ + + P +HY C+VDLL RA L A EFI+++P+ PD+++W LL C
Sbjct: 737 GLSYFRSMSKEHGLVPKPEHYVCVVDLLGRAALLCCAREFIEEMPIEPDAMIWRTLLSAC 796
Query: 511 VSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPG 570
H N+E G+ AA L+ELEP ++ YV+L+N++A +G+W RTRQ MKDR + K PG
Sbjct: 797 TVHKNIEIGEFAARHLLELEPEDSATYVLLSNMYAVSGKWDYRDRTRQMMKDRGVKKEPG 856
Query: 571 CSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
SWIE ++ IH F DR H +E+IY ID
Sbjct: 857 RSWIEVKNSIHAFFVGDRLHPLAEQIYEYID 887
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 160/554 (28%), Positives = 255/554 (46%), Gaps = 78/554 (14%)
Query: 27 NSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQ 86
N ++ + NG V A ER+ D+ VSW A+I G +QNG ++EAI + +M
Sbjct: 151 NPLIDLYSKNGHVDLAKLVFERLFLKDS-----VSWVAMISGLSQNGREDEAILLFCQMH 205
Query: 87 AEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDML 146
+ P SSVL AC +++ LG++ HG+I + G S FV N LV +Y R G+++
Sbjct: 206 KSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLI 265
Query: 147 SALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYV 206
+A +IFSK ++ +S N++I G + G A +LF++M+
Sbjct: 266 AAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQ------------------- 306
Query: 207 DNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDT 266
D ++P T S+L ACA + + KGK++H+ I +G+ SD
Sbjct: 307 -----------------LDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDL 349
Query: 267 FVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAM--------- 317
+ G+L+++Y + D+ A F E NV WN M
Sbjct: 350 IIEGSLLDLYVKCFDIETAHEYFLTTET--------------ENVVLWNVMLVAYGQLGN 395
Query: 318 -----QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTA 372
+F +M L P+ YT IL C+SL ++ G+Q+H I+ G+ +V++ +
Sbjct: 396 LSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSV 455
Query: 373 LVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPD 432
L+DMYAK G L AR +R+ D+VS AM+ Y H E + F+ + G R D
Sbjct: 456 LIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSD 515
Query: 433 HISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIK 492
+I F SA+SAC ++ G + L +V L +R G +AY +
Sbjct: 516 NIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIGNALVSLYARCGRAQDAYLAFE 575
Query: 493 KIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSD 552
KI A D++ W AL+ G G+ E ++ N G + ANLF + S
Sbjct: 576 KID-AKDNISWNALISGFAQSGHCEEALQVFSQM-----NQAG---VEANLFTFGSAVSA 626
Query: 553 LARTRQKMKDRRMH 566
A T + +++H
Sbjct: 627 TANTANIKQGKQIH 640
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 141/513 (27%), Positives = 242/513 (47%), Gaps = 47/513 (9%)
Query: 6 GSLDDAKK----VFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
GSL DAKK +FK + + V + ++ A+G V A++ + D + N+
Sbjct: 24 GSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFD-----DIPSSNVSF 78
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQ-KLSLGKEFHGYI 120
W+ VI G + +G+ M E + P+ T +SVL AC+ + + ++ H I
Sbjct: 79 WNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGKAPFQVTEQIHAKI 138
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+GF S+P V N L+D+Y + G + A +F + +K+ VS +I G +NG EA
Sbjct: 139 IHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAI 198
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LF QM + + PT + F SVL A
Sbjct: 199 LLFCQMH------------------------------------KSAVIPTPYVFSSVLSA 222
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C + + G+++H + GL S+TFV ALV +Y R+ +L+AA+ F ++ + +
Sbjct: 223 CTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISY 282
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G ++ A+QLF +M + PD TV +LSAC+S+ +GKQ+H+Y I+
Sbjct: 283 NSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIK 342
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
G SD+ I +L+D+Y KC ++ A + T ++V N ML AY G+ E
Sbjct: 343 MGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWI 402
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSR 480
F ++ G P+ ++ S L C G++ G + + + ++ + ++D+ ++
Sbjct: 403 FLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAK 462
Query: 481 AGELGEAYEFIKKIPMAPDSVMWGALLGGCVSH 513
GEL A ++++ D V W A++ G H
Sbjct: 463 HGELDTARGILQRL-REEDVVSWTAMIAGYTQH 494
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 128/514 (24%), Positives = 238/514 (46%), Gaps = 73/514 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y + G+L A+++F M RD +S+NS+++ A G AL+ E
Sbjct: 257 LYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFE------------- 303
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+MQ + ++P+ T++S+L ACA + GK+ H Y+
Sbjct: 304 -----------------------KMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYV 340
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G S+ + L+D+Y +C D+ +A + F +N V N ++V Y + GN++E+
Sbjct: 341 IKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESY 400
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+F QM+ +G+ P +T+ S+L
Sbjct: 401 WIFLQMQ------------------------------------IEGLMPNQYTYPSILRT 424
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C + +L G++IH I G Q + +V L++MY ++ +L A+ + + +
Sbjct: 425 CTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSW 484
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G+ + A++LF EM + + D +SAC+ + + +G+Q+HA +
Sbjct: 485 TAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYI 544
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
GY D+ IG ALV +YA+CG + A LA+++I D +S NA+++ +A GH +E +
Sbjct: 545 SGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSGHCEEALQV 604
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSR 480
F ++ +G + +F SA+SA + +IK G + +M + ++ L S+
Sbjct: 605 FSQMNQAGVEANLFTFGSAVSATANTANIKQGKQIHAMMIKTGYDSETEASNVLITLYSK 664
Query: 481 AGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
G + +A ++P + V W A++ G HG
Sbjct: 665 CGSIEDAKREFFEMP-EKNVVSWNAMITGYSQHG 697
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 127/290 (43%), Gaps = 2/290 (0%)
Query: 226 GIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAA 285
GI T+ + C + SL K++HA G + +G L+++Y + ++ A
Sbjct: 5 GIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNA 64
Query: 286 QMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSS- 344
FD+I + G + LFS M++ ++TPD T +L ACS
Sbjct: 65 IKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGG 124
Query: 345 LATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAM 404
A + +Q+HA I G+ S + L+D+Y+K G + A+L ++R+ D VS AM
Sbjct: 125 KAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAM 184
Query: 405 LTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDV 464
++ + +G E I F ++ S P F S LSAC K G + + + +
Sbjct: 185 ISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGL 244
Query: 465 KPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
+V L SR G L A + K+ D + + +L+ G G
Sbjct: 245 SSETFVCNALVTLYSRWGNLIAAEQIFSKMHRR-DRISYNSLISGLAQRG 293
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 58/117 (49%), Gaps = 2/117 (1%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KCGS++DAK+ F MPE++ VSWN+++T + +G EA+ E M L PN V
Sbjct: 661 LYSKCGSIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQL-GLMPNHV 719
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEF 116
++ V+ + G E + M E GL P V+ R L +EF
Sbjct: 720 TFVGVLSACSHVGLVNEGLSYFRSMSKEHGLVPKPEHYVCVVDLLGRAALLCCAREF 776
>gi|296088715|emb|CBI38165.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 202/633 (31%), Positives = 332/633 (52%), Gaps = 99/633 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+YGKC LDDA+K+F MP+R+ +WNS+++ +G + EA M P+
Sbjct: 59 VYGKCDCLDDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPE-----PDQC 113
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW++++ GF Q+ EE++ +M E N + S L ACA L L++G + H +
Sbjct: 114 SWNSMVSGFAQHDRFEESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALV 173
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+++ + ++ ++ + L+D+Y +CG + A ++FS +N V+ N++I Y +NG +EA
Sbjct: 174 SKSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEAL 233
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
E+F +M M G+EP T SV+ A
Sbjct: 234 EVFVRM------------------------------------MDSGLEPDEVTLASVVSA 257
Query: 241 CADMNSLRKGKEIHALAIALG-LQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
CA + +L++G +IHA + + D +G ALV+MY + + A+ FD + +I N++
Sbjct: 258 CASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRM-SIRNVV 316
Query: 300 GK------------------MKEDGFEPNVYTWN--------------AMQLFSEMLSLD 327
+ M + NV +WN A++LF +
Sbjct: 317 SETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRES 376
Query: 328 LTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHAR 387
+ P YT G +L SD+ +G +L+DMY KCGS++
Sbjct: 377 IWPTHYTFGNLLK------------------------SDIFVGNSLIDMYMKCGSIEDGS 412
Query: 388 LAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAG 447
++++ D VS NA++ YA +G+G E + FR++L G +PDH++ + L AC HAG
Sbjct: 413 RVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAG 472
Query: 448 SIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALL 507
++ G +F M + + P HYTCMVDLL RAG L EA I+ +P+ PD+V+WG+LL
Sbjct: 473 LVEEGRHYFFSMEEHGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLL 532
Query: 508 GGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHK 567
C HGN+E G+ AA++L+E++P N+G YV+L+N++A GRW D+ R R+ M+ + + K
Sbjct: 533 AACKVHGNIEMGKHAAEKLLEIDPWNSGPYVLLSNMYAELGRWGDVVRVRKLMRQQGVTK 592
Query: 568 SPGCSWIEDRDEIHKFRASDRSHDRSEEIYTII 600
PGCSWIE +H F D+SH ++IY+++
Sbjct: 593 QPGCSWIEVESRVHVFLVKDKSHPHRKQIYSVL 625
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 117/451 (25%), Positives = 207/451 (45%), Gaps = 54/451 (11%)
Query: 92 PNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKI 151
PN+ + +L +C R + + H I F F+ N L+DVY +C + A K+
Sbjct: 13 PNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKL 72
Query: 152 FSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLY 211
F + +N + N++I ++G + EA LF M + SWNSM+SG+ + +
Sbjct: 73 FDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMP----EPDQCSWNSMVSGFAQHDRF 128
Query: 212 DEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGA 271
+E+ F + R+ ++FGS L ACA + L G ++HAL +D ++G A
Sbjct: 129 EESLEYFVK-MHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSA 187
Query: 272 LVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWN--------------AM 317
L++MY + + A+ F + E N+ TWN A+
Sbjct: 188 LIDMYSKCGSVACAEEVFSGM--------------IERNLVTWNSLITCYEQNGPASEAL 233
Query: 318 QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCG-YDSDVHIGTALVDM 376
++F M+ L PD T+ ++SAC+SL ++ G Q+HA ++ + D+ +G ALVDM
Sbjct: 234 EVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDM 293
Query: 377 YAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISF 436
YAKC + AR + R+S ++VS+ +M++ YA K F ++ +S+
Sbjct: 294 YAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNV----VSW 349
Query: 437 LSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYT-------------CMVDLLSRAGE 483
+ ++ G + F L+ + P+ HYT ++D+ + G
Sbjct: 350 NALIAGYTQNGENEEALRLFRLLKRESIWPT--HYTFGNLLKSDIFVGNSLIDMYMKCGS 407
Query: 484 LGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
+ + +K+ D V W A++ G +G
Sbjct: 408 IEDGSRVFEKMK-ERDCVSWNAIIVGYAQNG 437
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 108/419 (25%), Positives = 182/419 (43%), Gaps = 80/419 (19%)
Query: 222 LMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQD 281
L+RD P S F +L +C S R + +HA + + F+ L+++Y +
Sbjct: 6 LVRDLYLPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDC 65
Query: 282 LVAAQMAFDEIEN-----IENLLGKMKEDGF------------EPNVYTWNAM------- 317
L A+ FD + +L+ + + GF EP+ +WN+M
Sbjct: 66 LDDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQH 125
Query: 318 -------QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIG 370
+ F +M D + Y+ G LSAC+ L + G QVHA + Y +DV++G
Sbjct: 126 DRFEESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMG 185
Query: 371 TALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFR 430
+AL+DMY+KCGS+ A + + +LV+ N+++T Y +G E + F R++ SG
Sbjct: 186 SALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLE 245
Query: 431 PDHISFLSALSAC-----------VHAGSIKT---------GSEFFDLMA---------- 460
PD ++ S +SAC +HA +KT G+ D+ A
Sbjct: 246 PDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARR 305
Query: 461 YYDVKPSLKHY---TCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
+D + S+++ T MV +RA + A K+ + V W AL+ G +G E
Sbjct: 306 VFD-RMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQR-NVVSWNALIAGYTQNGENE 363
Query: 518 FGQIAADRLIELEPNNTGNYVM-------------LANLFAYAGRWSDLARTRQKMKDR 563
+ RL++ E +Y L +++ G D +R +KMK+R
Sbjct: 364 EA-LRLFRLLKRESIWPTHYTFGNLLKSDIFVGNSLIDMYMKCGSIEDGSRVFEKMKER 421
>gi|413916018|gb|AFW55950.1| hypothetical protein ZEAMMB73_919937 [Zea mays]
Length = 864
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 218/667 (32%), Positives = 332/667 (49%), Gaps = 102/667 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKC SLDDA + F M ER N V
Sbjct: 195 MYGKCRSLDDALRFFHGMGER------------------------------------NSV 218
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW A I G QN + + +MQ GL + +S +CA + LS ++ H +
Sbjct: 219 SWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPAYASAFRSCAAMPCLSTARQLHAHA 278
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+N F S+ V +VDVY + G+++ A + F N +CN ++VG G AEA
Sbjct: 279 IKNVFSSDRVVGTAIVDVYAKAGNLVDARRAFIGLPHHNVETCNAMMVGLVRTGLGAEAM 338
Query: 181 ELFDQMEHLGVQRGIISWNSMIS------GY--------------------VDNSLYD-- 212
+LF M GV +IS + + S GY V N++ D
Sbjct: 339 QLFQFMTRSGVGFDVISLSGVFSACAEVKGYFQGLQVHCLAVKSGFDVDVCVRNAILDLY 398
Query: 213 -------EAFSMFRDL------------------------------LMRDGIEPTSFTFG 235
EA+ +F+++ ++R G+EP FT+G
Sbjct: 399 GKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAHLNEMLRSGMEPDDFTYG 458
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
SVL ACA + SL G +H AI GL D FV +V+MYC+ + AQ D I
Sbjct: 459 SVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTVVDMYCKCGAITEAQKLHDRIGGQ 518
Query: 296 ENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVH 355
E + GF + A + FSEML + + PD +T +L C++LAT+E GKQ+H
Sbjct: 519 ELVSWNSIISGFSLTKQSEEAQRFFSEMLDMGVKPDHFTYATVLDTCANLATIELGKQIH 578
Query: 356 AYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGK 415
I+ D +I + LVDMYAKCG++ + L +++ D VS NAM+ YA+HG G
Sbjct: 579 GQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKARKLDFVSWNAMICGYALHGQGL 638
Query: 416 EGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCM 474
E + F R+ + P+H +F++ L AC H G + G ++F LM + Y + P L+H+ CM
Sbjct: 639 EALEMFERMQRANVVPNHATFVAVLRACSHVGLLDDGCQYFHLMTSRYKLVPQLEHFACM 698
Query: 475 VDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNT 534
VD+L R+ EA EFI+ +P+ D+V+W LL C ++E + AA ++ L+P++
Sbjct: 699 VDILGRSKGPQEALEFIRSMPIEADAVVWKTLLSICKIRQDVEVAETAASNVLRLDPDDA 758
Query: 535 GNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSE 594
Y++L+N++A +G+W D++RTR+ M+ R+ K PGCSWIE + E+H F D+ H RS+
Sbjct: 759 SVYILLSNVYAGSGKWVDVSRTRRLMRQGRLRKEPGCSWIEVQSEMHGFLVGDKVHPRSK 818
Query: 595 EIYTIID 601
E+Y +++
Sbjct: 819 EVYEMLN 825
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 151/522 (28%), Positives = 236/522 (45%), Gaps = 68/522 (13%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +CG A VF MP RD VSWN+++TA G A M P++V
Sbjct: 63 MYARCGGTAHAHGVFDTMPHRDTVSWNTMLTAYVHAGDTDTAASLFGTMPD-----PDVV 117
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ +I G+ Q+G ++G+ M G+ + TL+ +L +C L L+LG + H
Sbjct: 118 SWNTLISGYCQHGMFRNSVGLSMEMSRRGVALDRTTLAVLLKSCGGLDDLALGVQIHALA 177
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G ++ + LVD+Y +C + AL+ F +N VS I G +N
Sbjct: 178 VKTGLETDVRAGSALVDMYGKCRSLDDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGM 237
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
ELF QM+ LG+ V Y AF +
Sbjct: 238 ELFVQMQRLGLG-------------VSQPAYASAFR-----------------------S 261
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI--ENIENL 298
CA M L +++HA AI SD VG A+V++Y + +LV A+ AF + N+E
Sbjct: 262 CAAMPCLSTARQLHAHAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAFIGLPHHNVETC 321
Query: 299 LGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYA 358
M G AMQLF M + D+ ++ + SAC+ + +G QVH A
Sbjct: 322 NAMMV--GLVRTGLGAEAMQLFQFMTRSGVGFDVISLSGVFSACAEVKGYFQGLQVHCLA 379
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGI 418
++ G+D DV + A++D+Y KC +L A L ++ + D VS NA++ A + ++ I
Sbjct: 380 VKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTI 439
Query: 419 AHFRRILASGFRPDHISFLSALSAC-----------VHAGSIKTGSEFFDLMAYYDVKPS 467
AH +L SG PD ++ S L AC VH +IK+G L A+
Sbjct: 440 AHLNEMLRSGMEPDDFTYGSVLKACAGLQSLEYGLVVHGKAIKSG---LGLDAFVS---- 492
Query: 468 LKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
+ +VD+ + G + EA + +I + V W +++ G
Sbjct: 493 ----STVVDMYCKCGAITEAQKLHDRIG-GQELVSWNSIISG 529
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 122/425 (28%), Positives = 202/425 (47%), Gaps = 30/425 (7%)
Query: 96 TLSSVLPACARLQK--LSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFS 153
T S + CA + L+ G+ H + +GFM FV N L+ +Y RCG A +F
Sbjct: 19 TFSHLYQLCASAGRSALTTGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGTAHAHGVFD 78
Query: 154 KFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDE 213
++ VS NT++ Y G+ A LF M ++SWN++ISGY + ++
Sbjct: 79 TMPHRDTVSWNTMLTAYVHAGDTDTAASLFGTMP----DPDVVSWNTLISGYCQHGMFRN 134
Query: 214 AFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALV 273
+ + + + R G+ T +L +C ++ L G +IHALA+ GL++D G ALV
Sbjct: 135 SVGLSME-MSRRGVALDRTTLAVLLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSALV 193
Query: 274 EMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIY 333
+MY + + L A F + ++ G N M+LF +M L L
Sbjct: 194 DMYGKCRSLDDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQP 253
Query: 334 TVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRI 393
+C+++ + +Q+HA+AI+ + SD +GTA+VD+YAK G+L AR A+ +
Sbjct: 254 AYASAFRSCAAMPCLSTARQLHAHAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAFIGL 313
Query: 394 STPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSAC---------- 443
++ + NAM+ G G E + F+ + SG D IS SAC
Sbjct: 314 PHHNVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGVGFDVISLSGVFSACAEVKGYFQGL 373
Query: 444 -VHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVM 502
VH ++K+G +DV +++ ++DL + L EAY +++ DSV
Sbjct: 374 QVHCLAVKSG---------FDVDVCVRN--AILDLYGKCKALVEAYLVFQEMEQ-RDSVS 421
Query: 503 WGALL 507
W A++
Sbjct: 422 WNAII 426
>gi|147833266|emb|CAN77478.1| hypothetical protein VITISV_013730 [Vitis vinifera]
Length = 1009
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 223/683 (32%), Positives = 334/683 (48%), Gaps = 84/683 (12%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y CG L ++ VF M ERD VSW ++++A GL EA M LD P+L+S
Sbjct: 228 YSNCGDLGSSRSVFHSMQERDVVSWTALISAYMEEGLXDEAKHIFHLMQ-LDGVKPDLIS 286
Query: 62 WSAVIGGF-----------------------------------TQNGYDEEAIGMLFRMQ 86
WSA++ GF QNGY E+A+ M RM
Sbjct: 287 WSALLSGFARNGEIDLALETLEEMPERGLQPTVNSWNGIISGCVQNGYLEDALDMFSRML 346
Query: 87 AEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDML 146
+PN T++S+LPAC L+ L LGK H ++G + N +V ++D+Y +CG
Sbjct: 347 WYPEDPNIITIASILPACTGLKALRLGKAIHXIAXKHGIVGNVYVEGSVIDMYSKCGSYD 406
Query: 147 SALKIFSKFSIKNE-----------------------------------VSCNTIIVGYC 171
A K+F K KN ++ NTI+ G+
Sbjct: 407 YAEKVFXKAENKNTAMWNEMIAAYVNEGKVEDALGLLRSMQKDGWKPDVITYNTILSGHA 466
Query: 172 ENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDL---------- 221
NG +A EL +M +G++ ++S+N +ISG+ + L EA +FR +
Sbjct: 467 RNGLKTQAXELLSEMVQMGLKPNVVSFNVLISGFQQSGLSYEALKVFRIMQSPSDGCNPN 526
Query: 222 -LMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQ 280
++ + P T L ACAD+N +GKEIH + G + + FV ALV+MY +
Sbjct: 527 EVLNLSMRPNPITITGALPACADLNLWCQGKEIHGYTLRNGFEPNIFVSSALVDMYAKCH 586
Query: 281 DLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILS 340
D+ +A F I+ + G+ N A++LF EML L P T I+
Sbjct: 587 DMDSANKVFFRIDGRNTVSWNALMAGYINNKQPEEALKLFLEMLGEGLQPSSITFMILFP 646
Query: 341 ACSSLATMERGKQVHAYAIRCGYDSDVH-IGTALVDMYAKCGSLKHARLAYKRISTPDLV 399
AC +A + G+ +H YA +C D + I +AL+DMYAKCGS+ A+ + D+
Sbjct: 647 ACGDIAAIRFGRGLHGYAAKCQLDELKNAIXSALIDMYAKCGSILDAKSVFDSEVEKDVP 706
Query: 400 SQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM 459
NAM++A+++HG + A F ++ G PDHI+F+S LSAC G ++ G ++F+ M
Sbjct: 707 LWNAMISAFSVHGMARNAFAVFXQMELLGIXPDHITFVSLLSACARDGLVEEGWKYFNSM 766
Query: 460 AY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEF 518
Y V +L+HYTCMV +L AG L EA +FI+++P PD+ MW LL C H N E
Sbjct: 767 EISYGVAATLEHYTCMVGILGGAGLLDEALDFIRQMPYPPDACMWATLLQACRVHSNPEI 826
Query: 519 GQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRD 578
G+ AA L ELEP+N NY++L+N++ +G W R M+ R++ CS++
Sbjct: 827 GERAAKALFELEPDNATNYMLLSNIYVSSGMWDFAKNLRSFMRGRKLLTIKECSYLTVGS 886
Query: 579 EIHKFRASDRSHDRSEEIYTIID 601
F+ + SH EEI D
Sbjct: 887 HXCTFKGGESSHPELEEILETWD 909
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 150/640 (23%), Positives = 279/640 (43%), Gaps = 135/640 (21%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALEC-----LERMSSLDNE 55
+ +C +L + +++ + + + + W S + N LV+ L C LE L +E
Sbjct: 89 LLNRCSTLSEFRQIHARVVKLNALKWKSSI----GNKLVV--LYCKNQWSLEDARKLLDE 142
Query: 56 TPN--LVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLG 113
PN + +++A+I + ++ +E M EG+ P+ + ++L AC+ + +G
Sbjct: 143 IPNRTVPAYAALIRSYCRSEQWDELFSXFRLMVYEGMLPDKYLVPTILKACSAMLLXRIG 202
Query: 114 KEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCEN 173
K HG++ R S+ FV N L+ Y CGD+ S+ +F ++ VS +I Y E
Sbjct: 203 KMVHGFVIRKSVESDVFVGNALIHFYSNCGDLGSSRSVFHSMQERDVVSWTALISAYMEE 262
Query: 174 GNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTS-- 231
G EA+ +F M+ GV+ +ISW++++SG+ N D A ++ R G++PT
Sbjct: 263 GLXDEAKHIFHLMQLDGVKPDLISWSALLSGFARNGEIDLALETLEEMPER-GLQPTVNS 321
Query: 232 ---------------------------------FTFGSVLIACADMNSLRKGKEIHALAI 258
T S+L AC + +LR GK IH +A
Sbjct: 322 WNGIISGCVQNGYLEDALDMFSRMLWYPEDPNIITIASILPACTGLKALRLGKAIHXIAX 381
Query: 259 ALGLQSDTFVGGALVEMYCR---------------------YQDLVAAQMAFDEIENIEN 297
G+ + +V G++++MY + + +++AA + ++E+
Sbjct: 382 KHGIVGNVYVEGSVIDMYSKCGSYDYAEKVFXKAENKNTAMWNEMIAAYVNEGKVEDALG 441
Query: 298 LLGKMKEDGFEPNVYTWN--------------AMQLFSEMLSLDLTPDIYTVGIILS--- 340
LL M++DG++P+V T+N A +L SEM+ + L P++ + +++S
Sbjct: 442 LLRSMQKDGWKPDVITYNTILSGHARNGLKTQAXELLSEMVQMGLKPNVVSFNVLISGFQ 501
Query: 341 --------------------------------------------ACSSLATMERGKQVHA 356
AC+ L +GK++H
Sbjct: 502 QSGLSYEALKVFRIMQSPSDGCNPNEVLNLSMRPNPITITGALPACADLNLWCQGKEIHG 561
Query: 357 YAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKE 416
Y +R G++ ++ + +ALVDMYAKC + A + RI + VS NA++ Y + +E
Sbjct: 562 YTLRNGFEPNIFVSSALVDMYAKCHDMDSANKVFFRIDGRNTVSWNALMAGYINNKQPEE 621
Query: 417 GIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKH--YTCM 474
+ F +L G +P I+F+ AC +I+ G A + LK+ + +
Sbjct: 622 ALKLFLEMLGEGLQPSSITFMILFPACGDIAAIRFGRGLHGYAAKCQLD-ELKNAIXSAL 680
Query: 475 VDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
+D+ ++ G + +A + D +W A++ HG
Sbjct: 681 IDMYAKCGSILDAKSVFDS-EVEKDVPLWNAMISAFSVHG 719
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 106/442 (23%), Positives = 193/442 (43%), Gaps = 81/442 (18%)
Query: 127 SNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSC-----NTIIVGYCENG-NVAEAR 180
S+P ++ + + RC + +I ++ N + N ++V YC+N ++ +AR
Sbjct: 78 SSPTEISDSISLLNRCSTLSEFRQIHARVVKLNALKWKSSIGNKLVVLYCKNQWSLEDAR 137
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+L D++ + R + ++ ++I Y + +DE FS FR L++ +G+ P + ++L A
Sbjct: 138 KLLDEIPN----RTVPAYAALIRSYCRSEQWDELFSXFR-LMVYEGMLPDKYLVPTILKA 192
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAF----------- 289
C+ M R GK +H I ++SD FVG AL+ Y DL +++ F
Sbjct: 193 CSAMLLXRIGKMVHGFVIRKSVESDVFVGNALIHFYSNCGDLGSSRSVFHSMQERDVVSW 252
Query: 290 -------------DEIENIENL--------------------------------LGKMKE 304
DE ++I +L L +M E
Sbjct: 253 TALISAYMEEGLXDEAKHIFHLMQLDGVKPDLISWSALLSGFARNGEIDLALETLEEMPE 312
Query: 305 DGFEPNVYTWN--------------AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMER 350
G +P V +WN A+ +FS ML P+I T+ IL AC+ L +
Sbjct: 313 RGLQPTVNSWNGIISGCVQNGYLEDALDMFSRMLWYPEDPNIITIASILPACTGLKALRL 372
Query: 351 GKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAM 410
GK +H A + G +V++ +++DMY+KCGS +A + + + N M+ AY
Sbjct: 373 GKAIHXIAXKHGIVGNVYVEGSVIDMYSKCGSYDYAEKVFXKAENKNTAMWNEMIAAYVN 432
Query: 411 HGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKH 470
G ++ + R + G++PD I++ + LS G E M +KP++
Sbjct: 433 EGKVEDALGLLRSMQKDGWKPDVITYNTILSGHARNGLKTQAXELLSEMVQMGLKPNVVS 492
Query: 471 YTCMVDLLSRAGELGEAYEFIK 492
+ ++ ++G EA + +
Sbjct: 493 FNVLISGFQQSGLSYEALKVFR 514
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 133/291 (45%), Gaps = 10/291 (3%)
Query: 236 SVLIACADMNSLRKGKEIHALAIAL-GLQSDTFVGGALVEMYCRYQ-DLVAAQMAFDEIE 293
S+L C+ ++ R +IHA + L L+ + +G LV +YC+ Q L A+ DEI
Sbjct: 88 SLLNRCSTLSEFR---QIHARVVKLNALKWKSSIGNKLVVLYCKNQWSLEDARKLLDEIP 144
Query: 294 NIENLLGKMKEDGFEPNVYTWNAM-QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGK 352
N + W+ + F M+ + PD Y V IL ACS++ GK
Sbjct: 145 N-RTVPAYAALIRSYCRSEQWDELFSXFRLMVYEGMLPDKYLVPTILKACSAMLLXRIGK 203
Query: 353 QVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHG 412
VH + IR +SDV +G AL+ Y+ CG L +R + + D+VS A+++AY G
Sbjct: 204 MVHGFVIRKSVESDVFVGNALIHFYSNCGDLGSSRSVFHSMQERDVVSWTALISAYMEEG 263
Query: 413 HGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYT 472
E F + G +PD IS+ + LS G I E + M ++P++ +
Sbjct: 264 LXDEAKHIFHLMQLDGVKPDLISWSALLSGFARNGEIDLALETLEEMPERGLQPTVNSWN 323
Query: 473 CMVDLLSRAGELGEAYEFIKKI---PMAPDSVMWGALLGGCVSHGNLEFGQ 520
++ + G L +A + ++ P P+ + ++L C L G+
Sbjct: 324 GIISGCVQNGYLEDALDMFSRMLWYPEDPNIITIASILPACTGLKALRLGK 374
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGS+ DAK VF E+D WN++++A + +G+ A +M L P+ +
Sbjct: 683 MYAKCGSILDAKSVFDSEVEKDVPLWNAMISAFSVHGMARNAFAVFXQMELL-GIXPDHI 741
Query: 61 SWSAVIGGFTQNGYDEE 77
++ +++ ++G EE
Sbjct: 742 TFVSLLSACARDGLVEE 758
>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
Length = 720
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 201/579 (34%), Positives = 319/579 (55%), Gaps = 44/579 (7%)
Query: 20 ERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAI 79
ER+ V NS+V N V A + + M+ D ++SW+++I G+ NG E+ +
Sbjct: 77 ERNSVG-NSLVAFYLKNQRVDSARKVFDEMTERD-----VISWNSIINGYVSNGLAEKGL 130
Query: 80 GMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVY 139
+ +M G+E + T+ SV CA + +SLG+ H + F N L+D+Y
Sbjct: 131 SVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMY 190
Query: 140 RRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWN 199
+CGD+ SA +F + S ++ VS ++I GY G EA +LF++ME
Sbjct: 191 SKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEE----------- 239
Query: 200 SMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIA 259
+GI P +T +VL CA L +GK +H
Sbjct: 240 -------------------------EGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKE 274
Query: 260 LGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQL 319
L D FV AL++MY + + A++ F E+ + + G+ N Y A+ L
Sbjct: 275 NDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSL 334
Query: 320 FSEMLSLD-LTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYA 378
F+ +L +PD TV +L AC+SL+ ++G+++H Y +R GY SD H+ +LVDMYA
Sbjct: 335 FNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYA 394
Query: 379 KCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLS 438
KCG+L A + + I++ DLVS M+ Y MHG GKE IA F ++ +G D ISF+S
Sbjct: 395 KCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVS 454
Query: 439 ALSACVHAGSIKTGSEFFDLMAYY-DVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMA 497
L AC H+G + G FF++M + ++P+++HY C+VD+L+R G+L +AY FI+ +P+
Sbjct: 455 LLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIP 514
Query: 498 PDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTR 557
PD+ +WGALL GC H +++ + A+++ ELEP NTG YV++AN++A A +W + R R
Sbjct: 515 PDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLR 574
Query: 558 QKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEI 596
+++ R + K+PGCSWIE + ++ F A D S+ +E I
Sbjct: 575 KRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENI 613
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/363 (28%), Positives = 158/363 (43%), Gaps = 71/363 (19%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGL---------------------- 38
MY KCG LD AK VF+ M +R VS+ S++ A GL
Sbjct: 189 MYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYT 248
Query: 39 VLEALECLERMSSLDN-------------------------------------------E 55
V L C R LD
Sbjct: 249 VTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMR 308
Query: 56 TPNLVSWSAVIGGFTQNGYDEEAIGML-FRMQAEGLEPNARTLSSVLPACARLQKLSLGK 114
+++SW+ +IGG+++N Y EA+ + ++ + P+ RT++ VLPACA L G+
Sbjct: 309 VKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGR 368
Query: 115 EFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
E HGYI RNG+ S+ V N LVD+Y +CG +L A +F + K+ VS +I GY +G
Sbjct: 369 EIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHG 428
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTF 234
EA LF+QM G++ IS+ S++ + L DE + F + IEPT +
Sbjct: 429 FGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHY 488
Query: 235 GSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCR-YQDLVAAQMAFDEIE 293
++ A L K + + + D + GAL+ CR + D+ A+ +++
Sbjct: 489 ACIVDMLARTGDLIKA---YRFIENMPIPPDATIWGALL-CGCRIHHDVKLAEKVAEKVF 544
Query: 294 NIE 296
+E
Sbjct: 545 ELE 547
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 143/312 (45%), Gaps = 2/312 (0%)
Query: 198 WNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALA 257
WN +++ + + + +F+ + M G+E S+TF V + + + S+ G+++H
Sbjct: 12 WNILMNELAKSGDFSGSIGLFKKM-MSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFI 70
Query: 258 IALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAM 317
+ G VG +LV Y + Q + +A+ FDE+ + + +G+ N +
Sbjct: 71 LKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGL 130
Query: 318 QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMY 377
+F +ML + D+ T+ + + C+ + G+ VH+ ++ + + L+DMY
Sbjct: 131 SVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMY 190
Query: 378 AKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFL 437
+KCG L A+ ++ +S +VS +M+ YA G E + F + G PD +
Sbjct: 191 SKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVT 250
Query: 438 SALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMA 497
+ L+ C + G + + D+ + ++D+ ++ G + EA E +
Sbjct: 251 AVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEA-ELVFSEMRV 309
Query: 498 PDSVMWGALLGG 509
D + W ++GG
Sbjct: 310 KDIISWNTIIGG 321
>gi|225462250|ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
gi|297736133|emb|CBI24171.3| unnamed protein product [Vitis vinifera]
Length = 687
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 212/583 (36%), Positives = 312/583 (53%), Gaps = 75/583 (12%)
Query: 57 PNLVSWSAVIGGFTQNGYDEEAIGML--FRMQAEGLEPNARTLSSVLPACARLQKLSLGK 114
P+L +W+ +I T++G EAI FR +EP+ L SV ACA L+ + K
Sbjct: 40 PDLPTWTILISALTKHGRSLEAIQYYNDFR-HKNCVEPDKLLLLSVAKACASLRDVMNAK 98
Query: 115 EFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
H R GF S+ + N L+D+Y +C C G
Sbjct: 99 RVHEDAIRFGFCSDVLLGNALIDMYGKC---------------------------RCSEG 131
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTF 234
AR +F+ M R +ISW SM S YV+ L EA FR + + +G P S T
Sbjct: 132 ----ARLVFEGMPF----RDVISWTSMASCYVNCGLLREALGAFRKMGL-NGERPNSVTV 182
Query: 235 GSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFD---- 290
S+L AC D+ L+ G+E+H + G+ + FV ALV MY + AQ+ FD
Sbjct: 183 SSILPACTDLKDLKSGREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSR 242
Query: 291 -----------------EIENIENLLGKMKEDGFEPNVYTWNA--------------MQL 319
E E ++ G+M +G N +WNA +++
Sbjct: 243 RDTVSWNVLITAYFLNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEV 302
Query: 320 FSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAK 379
S M + P+ T+ +L AC++L ++ GKQ+H Y R + D+ TALV MYAK
Sbjct: 303 LSRMQNSGFKPNQITITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAK 362
Query: 380 CGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSA 439
CG L+ +R + ++ D VS N M+ A +MHG+G+E + FR ++ SG RP+ ++F
Sbjct: 363 CGDLELSRRVFSMMTKRDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVRPNSVTFTGV 422
Query: 440 LSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAP 498
LS C H+ + G FD M+ + V+P H++CMVD+LSRAG L EAYEFIKK+P+ P
Sbjct: 423 LSGCSHSRLVDEGLLIFDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPIEP 482
Query: 499 DSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQ 558
+ WGALLGGC + N+E G+IAA+RL E+E +N GNYV+L+N+ A WS+ + TR+
Sbjct: 483 TAGAWGALLGGCRVYKNVELGRIAANRLFEIESDNPGNYVLLSNILVSAKLWSEASETRK 542
Query: 559 KMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
M+DR + K+PGCSWI+ R+ +H F D+S+D+S+EIY +D
Sbjct: 543 LMRDRGVTKNPGCSWIQVRNRVHTFVVGDKSNDQSDEIYRFLD 585
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 118/396 (29%), Positives = 177/396 (44%), Gaps = 56/396 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKC + A+ VF+ MP RD +SW S+ + GL+ EAL
Sbjct: 122 MYGKCRCSEGARLVFEGMPFRDVISWTSMASCYVNCGLLREAL----------------- 164
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
G F + G + E PN+ T+SS+LPAC L+ L G+E HG++
Sbjct: 165 ------GAFRKMGLNGE-------------RPNSVTVSSILPACTDLKDLKSGREVHGFV 205
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
RNG N FV + LV++Y C + A +F S ++ VS N +I Y N +
Sbjct: 206 VRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAYFLNKECEKGL 265
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+F +M GV SWN++I G + N ++A + + G +P T SVL A
Sbjct: 266 SVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVL-SRMQNSGFKPNQITITSVLPA 324
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE------- 293
C ++ SLR GK+IH D ALV MY + DL ++ F +
Sbjct: 325 CTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELSRRVFSMMTKRDTVSW 384
Query: 294 NIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ 353
N + M +G E A+ LF EM+ + P+ T +LS CS ++ G
Sbjct: 385 NTMIIATSMHGNGEE-------ALLLFREMVDSGVRPNSVTFTGVLSGCSHSRLVDEGLL 437
Query: 354 VHAYAIR---CGYDSDVHIGTALVDMYAKCGSLKHA 386
+ R D+D H + +VD+ ++ G L+ A
Sbjct: 438 IFDSMSRDHSVEPDADHH--SCMVDVLSRAGRLEEA 471
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 104/407 (25%), Positives = 184/407 (45%), Gaps = 52/407 (12%)
Query: 170 YCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEP 229
Y +G++ AR LFD++ Q + +W +IS + EA + D ++ +EP
Sbjct: 21 YSNSGDLQRARHLFDKIP----QPDLPTWTILISALTKHGRSLEAIQYYNDFRHKNCVEP 76
Query: 230 TSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMY--CRYQD---LVA 284
SV ACA + + K +H AI G SD +G AL++MY CR + LV
Sbjct: 77 DKLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGARLVF 136
Query: 285 AQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSS 344
M F ++ + ++ G A+ F +M P+ TV IL AC+
Sbjct: 137 EGMPFRDVISWTSMASCYVNCGL-----LREALGAFRKMGLNGERPNSVTVSSILPACTD 191
Query: 345 LATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAM 404
L ++ G++VH + +R G +V + +ALV+MYA C S++ A+L + +S D VS N +
Sbjct: 192 LKDLKSGREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVL 251
Query: 405 LTAYAMHGHGKEGIAHFRRILA-----------------------------------SGF 429
+TAY ++ ++G++ F R+++ SGF
Sbjct: 252 ITAYFLNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSGF 311
Query: 430 RPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYE 489
+P+ I+ S L AC + S++ G + + + L T +V + ++ G+L E
Sbjct: 312 KPNQITITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDL-ELSR 370
Query: 490 FIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIE--LEPNNT 534
+ + D+V W ++ HGN E + +++ + PN+
Sbjct: 371 RVFSMMTKRDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVRPNSV 417
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 63/117 (53%), Gaps = 2/117 (1%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG L+ +++VF MM +RD VSWN+++ A + +G EAL M PN V
Sbjct: 359 MYAKCGDLELSRRVFSMMTKRDTVSWNTMIIATSMHGNGEEALLLFREMVD-SGVRPNSV 417
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEF 116
+++ V+ G + + +E + + M + +EP+A S ++ +R +L EF
Sbjct: 418 TFTGVLSGCSHSRLVDEGLLIFDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEAYEF 474
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 74/192 (38%), Gaps = 43/192 (22%)
Query: 368 HIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILAS 427
H+ + +Y+ G L+ AR + +I PDL + +++A HG E I ++
Sbjct: 12 HLALKFIKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHK 71
Query: 428 G-FRPDHISFLSALSAC-----------VHAGSIKTG--------------------SE- 454
PD + LS AC VH +I+ G SE
Sbjct: 72 NCVEPDKLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEG 131
Query: 455 ---FFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPM---APDSVMWGALLG 508
F+ M + DV +C V+ G L EA +K+ + P+SV ++L
Sbjct: 132 ARLVFEGMPFRDVISWTSMASCYVN----CGLLREALGAFRKMGLNGERPNSVTVSSILP 187
Query: 509 GCVSHGNLEFGQ 520
C +L+ G+
Sbjct: 188 ACTDLKDLKSGR 199
>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
Length = 1005
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 207/601 (34%), Positives = 312/601 (51%), Gaps = 74/601 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG + AK++F + RD LV
Sbjct: 373 MYAKCGETEKAKQLFWGLQGRD------------------------------------LV 396
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+WSA+I Q GY EEA+ + MQ + ++PN TL S+LPACA L L LGK H +
Sbjct: 397 AWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFT 456
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ S+ LV +Y +CG +AL F++ S
Sbjct: 457 VKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMS------------------------ 492
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
R I++WNS+I+GY A MF L + I P + T V+ A
Sbjct: 493 -----------SRDIVTWNSLINGYAQIGDPYNAIDMFYKLRL-SAINPDAGTMVGVVPA 540
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN-LL 299
CA +N L +G IH L + LG +SD V AL++MY + L +A+ F++ + ++ +
Sbjct: 541 CALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVT 600
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
+ + N + A+ F +M + P+ T +L A + LA G HA I
Sbjct: 601 WNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACII 660
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
+ G+ S+ +G +L+DMYAKCG L ++ + + D VS NAML+ YA+HGHG IA
Sbjct: 661 QMGFLSNTLVGNSLIDMYAKCGQLXYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIA 720
Query: 420 HFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLL 478
F + S + D +SF+S LSAC H G ++ G + F M+ Y +KP L+HY CMVDLL
Sbjct: 721 LFSLMQESQVQIDSVSFVSVLSACRHXGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLL 780
Query: 479 SRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYV 538
RAG E FIK +P+ PD+ +WGALLG C H N++ G++A D L++LEP N ++V
Sbjct: 781 GRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFV 840
Query: 539 MLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYT 598
+L++++A +GRW+D + R KM D + K+PGCSW+E ++++H FR D+SH + E ++
Sbjct: 841 VLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLESMHL 900
Query: 599 I 599
+
Sbjct: 901 L 901
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 143/539 (26%), Positives = 233/539 (43%), Gaps = 82/539 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G L A++VF MP+RD +V
Sbjct: 173 MYSKMGDLKRAREVFDKMPKRD------------------------------------VV 196
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+A+I G +Q+ EA+ MQ G+EP++ +L ++ P +L + L + HGY+
Sbjct: 197 AWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYV 256
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R F S V NGL+D+Y +CGD V AR
Sbjct: 257 FRRDFSSA--VSNGLIDLYSKCGD-------------------------------VDVAR 283
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+FDQM V + +SW +M++GY N + E +F D + + + S +A
Sbjct: 284 RVFDQM----VDQDDVSWGTMMAGYAHNGCFVEVLELF-DKMKLGNVRINKVSAVSAFLA 338
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
A+ L KGKEIH A+ + SD V L+ MY + + A+ F ++ + +
Sbjct: 339 AAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAW 398
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
Y A+ LF EM + + P+ T+ IL AC+ L+ ++ GK +H + ++
Sbjct: 399 SAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVK 458
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
DSD+ GTALV MYAKCG A + R+S+ D+V+ N+++ YA G I
Sbjct: 459 ADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDM 518
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSR 480
F ++ S PD + + + AC + G+ L+ + ++D+ ++
Sbjct: 519 FYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAK 578
Query: 481 AGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE-----FGQIAADRLIELEPNNT 534
G L A K D V W ++ + +G+ + F Q+ RL PN+
Sbjct: 579 CGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQM---RLENFHPNSV 634
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 112/460 (24%), Positives = 211/460 (45%), Gaps = 41/460 (8%)
Query: 57 PNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEF 116
P+ + W+++I +T++ EA+ M + M +GLEP+ T + VL AC L G F
Sbjct: 92 PSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWF 151
Query: 117 HGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNV 176
HG I R G + F+ GLVD+Y + GD+ A ++F K ++ V+ N +I G ++ +
Sbjct: 152 HGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDP 211
Query: 177 AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGS 236
EA + F M+ +GV EP+S + +
Sbjct: 212 CEAVDFFRSMQLVGV------------------------------------EPSSVSLLN 235
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
+ ++++ + IH S V L+++Y + D+ A+ FD++ + +
Sbjct: 236 LFPGICKLSNIELCRSIHGYVFRRDFSSA--VSNGLIDLYSKCGDVDVARRVFDQMVDQD 293
Query: 297 NLLGKMKEDGFEPNVYTWNAMQLFSEM-LSLDLTPDIYTVGIILSACSSLATMERGKQVH 355
++ G+ N ++LF +M L + V L+A ++ +E+GK++H
Sbjct: 294 DVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETI-DLEKGKEIH 352
Query: 356 AYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGK 415
A++ DSD+ + T L+ MYAKCG + A+ + + DLV+ +A++ A G+ +
Sbjct: 353 GCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPE 412
Query: 416 EGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMV 475
E ++ F+ + +P+ ++ +S L AC +K G D+ L T +V
Sbjct: 413 EALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALV 472
Query: 476 DLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
+ ++ G A ++ + D V W +L+ G G+
Sbjct: 473 SMYAKCGFFTAALTTFNRMS-SRDIVTWNSLINGYAQIGD 511
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 159/367 (43%), Gaps = 13/367 (3%)
Query: 160 EVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGI---------ISWNSMISGYVDNSL 210
++ I+ G+ + ++ L+ + R + I WNSMI Y +
Sbjct: 50 QIHAQIIVSGFKHHHSITHLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQ 109
Query: 211 YDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGG 270
Y+EA M+ ++ G+EP +TF VL AC +L++G H GL+ D F+G
Sbjct: 110 YNEALEMYY-CMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGA 168
Query: 271 ALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTP 330
LV+MY + DL A+ FD++ + + G + A+ F M + + P
Sbjct: 169 GLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEP 228
Query: 331 DIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAY 390
++ + L+ +E + +H Y R + S V G L+D+Y+KCG + AR +
Sbjct: 229 SSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAVSNG--LIDLYSKCGDVDVARRVF 286
Query: 391 KRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIK 450
++ D VS M+ YA +G E + F ++ R + +S +SA A ++
Sbjct: 287 DQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLE 346
Query: 451 TGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGC 510
G E + + T ++ + ++ GE +A + + D V W A++
Sbjct: 347 KGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGL-QGRDLVAWSAIIAAL 405
Query: 511 VSHGNLE 517
V G E
Sbjct: 406 VQTGYPE 412
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 123/281 (43%), Gaps = 7/281 (2%)
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
+ +L +C +N L +IHA I G + + L+ +Y + A+ FD
Sbjct: 35 YPRLLSSCKHLNPLL---QIHAQIIVSGFKHHHSITH-LINLYSLFHKCDLARSVFDSTP 90
Query: 294 NIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ 353
N +L + + A++++ M+ L PD YT +L AC+ ++ G
Sbjct: 91 NPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVW 150
Query: 354 VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGH 413
H R G + DV IG LVDMY+K G LK AR + ++ D+V+ NAM+ +
Sbjct: 151 FHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSED 210
Query: 414 GKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTC 473
E + FR + G P +S L+ +I+ + D ++ +
Sbjct: 211 PCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAVSN--G 268
Query: 474 MVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
++DL S+ G++ A ++ + D V WG ++ G +G
Sbjct: 269 LIDLYSKCGDVDVARRVFDQM-VDQDDVSWGTMMAGYAHNG 308
>gi|8778977|gb|AAF79892.1|AC022472_1 Contains similarity to an unknown protein F28A21.160 gi|7486269
from Arabidopsis thaliana BAC F28A21 gi|T04867 and
contains multiple PPR PF|01535 repeats. EST gb|AI999742
comes from this gene. This gene may be cut off, partial
[Arabidopsis thaliana]
Length = 757
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 192/581 (33%), Positives = 315/581 (54%), Gaps = 37/581 (6%)
Query: 57 PNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEF 116
P + S+S++I T+ ++IG+ RM + GL P++ L ++ CA L +GK+
Sbjct: 79 PTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQI 138
Query: 117 HGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNV 176
H +G + FV + +Y RCG M A K+F + S K+ V+C+ ++ Y G +
Sbjct: 139 HCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCL 198
Query: 177 AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGS 236
E + +ME G++ I+SWN ++SG+ + + EA MF+ + G P T S
Sbjct: 199 EEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKI-HHLGFCPDQVTVSS 257
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
VL + D L G+ IH I GL D V A+++MY + + F++ E +E
Sbjct: 258 VLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMME 317
Query: 297 ---------------------NLLGKMKEDGFEPNVYTWN--------------AMQLFS 321
+ KE E NV +W A++LF
Sbjct: 318 AGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFR 377
Query: 322 EMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCG 381
EM + P+ T+ +L AC ++A + G+ H +A+R +VH+G+AL+DMYAKCG
Sbjct: 378 EMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCG 437
Query: 382 SLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALS 441
+ +++ + + T +LV N+++ ++MHG KE ++ F ++ + +PD ISF S LS
Sbjct: 438 RINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLS 497
Query: 442 ACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDS 500
AC G G ++F +M+ Y +KP L+HY+CMV+LL RAG+L EAY+ IK++P PDS
Sbjct: 498 ACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDS 557
Query: 501 VMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKM 560
+WGALL C N++ +IAA++L LEP N G YV+L+N++A G W+++ R KM
Sbjct: 558 CVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKM 617
Query: 561 KDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
+ + K+PGCSWI+ ++ ++ A D+SH + ++I +D
Sbjct: 618 ESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMD 658
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 114/409 (27%), Positives = 212/409 (51%), Gaps = 4/409 (0%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +CG + DA+KVF M ++D V+ ++++ A A G + E + L M S E N+V
Sbjct: 160 MYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEA-NIV 218
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ ++ GF ++GY +EA+ M ++ G P+ T+SSVLP+ + L++G+ HGY+
Sbjct: 219 SWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYV 278
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G + + V++ ++D+Y + G + + +F++F + CN I G NG V +A
Sbjct: 279 IKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKAL 338
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
E+F+ + ++ ++SW S+I+G N EA +FR++ + G++P T S+L A
Sbjct: 339 EMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVA-GVKPNHVTIPSMLPA 397
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C ++ +L G+ H A+ + L + VG AL++MY + + +Q+ F+ + +
Sbjct: 398 CGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCW 457
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG-KQVHAYAI 359
+GF + M +F ++ L PD + +LSAC + + G K +
Sbjct: 458 NSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSE 517
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNAMLTA 407
G + + +V++ + G L+ A K + PD A+L +
Sbjct: 518 EYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNS 566
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 135/340 (39%), Gaps = 79/340 (23%)
Query: 249 KGKEIHALAIALGLQSDTFVGGALVEMYCRYQ-----DLVAAQMAFDEIENIENLLGKMK 303
K + HA + G Q+D ++ L+ Y Y DLV + I + +L+ +
Sbjct: 33 KTTQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALT 92
Query: 304 EDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGY 363
+ ++T ++ +FS M S L PD + + + C+ L+ + GKQ+H + G
Sbjct: 93 ----KAKLFT-QSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGL 147
Query: 364 DSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMH------------ 411
D D + ++ MY +CG + AR + R+S D+V+ +A+L AYA
Sbjct: 148 DMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSE 207
Query: 412 -----------------------GHGKEGIAHFRRILASGFRPDHISFLSALSAC----- 443
G+ KE + F++I GF PD ++ S L +
Sbjct: 208 MESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEM 267
Query: 444 ------VHAGSIKTG--------SEFFDLMA----YYDVKPSLKHYTCM--------VDL 477
+H IK G S D+ Y + + M +
Sbjct: 268 LNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITG 327
Query: 478 LSRAGELGEA---YEFIKKIPMAPDSVMWGALLGGCVSHG 514
LSR G + +A +E K+ M + V W +++ GC +G
Sbjct: 328 LSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNG 367
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 63/168 (37%), Gaps = 1/168 (0%)
Query: 350 RGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYA 409
+ Q HA ++ G +D +I L+ Y+ A L + I P + S ++++ A
Sbjct: 33 KTTQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALT 92
Query: 410 MHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLK 469
+ I F R+ + G PD + C + K G + + +
Sbjct: 93 KAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAF 152
Query: 470 HYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
M + R G +G+A + ++ D V ALL G LE
Sbjct: 153 VQGSMFHMYMRCGRMGDARKVFDRMS-DKDVVTCSALLCAYARKGCLE 199
>gi|255585601|ref|XP_002533488.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526650|gb|EEF28892.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 939
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 196/601 (32%), Positives = 322/601 (53%), Gaps = 73/601 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGSL DA+++F +P+ +N+++ C N
Sbjct: 321 MYAKCGSLADAQRIFNSLPKHSLQCYNAIIVGCVRN------------------------ 356
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+ G+ EA+ + GL N +LS ACA ++ G++ H
Sbjct: 357 ----------EKGF--EALQFFQLLLKSGLGFNEISLSGAFSACASIKGDLDGRQLHSLS 404
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
++ SN V N ++D+Y +C + +EA
Sbjct: 405 VKSTLRSNICVANSILDMYGKCEAL-------------------------------SEAC 433
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+FD+ME +R +SWN++I+ + N +E ++F +L R +EP FT+GSVL A
Sbjct: 434 CMFDEME----RRDAVSWNAVIAAHEQNGNEEETLNLFASML-RLRMEPDQFTYGSVLKA 488
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C+ +L G EIH I GL D+FVGGAL++MYC+ + A+ D IE +
Sbjct: 489 CSSQQALNSGMEIHNRIIKSGLGLDSFVGGALIDMYCKCGMIEEAKKIHDRIEQQTMVSW 548
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
GF ++ +A F EML + + PD +T I+L AC++LA++ GKQ+H I+
Sbjct: 549 NAIIAGFTLLKHSEDAHSFFYEMLKMSVKPDNFTYAIVLDACANLASVGLGKQIHGQIIK 608
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
SDV+I + LVDMY+KCG+++ + L +++ D V+ NAM+ YA HG G+E + +
Sbjct: 609 LELHSDVYITSTLVDMYSKCGNMQDSALVFEKAPNKDFVTWNAMICGYAQHGLGEEALGY 668
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFD-LMAYYDVKPSLKHYTCMVDLLS 479
F R+ RP+H +F+S L AC H G I G +F+ ++ Y ++P ++HY+CM+D++
Sbjct: 669 FERMQLENVRPNHATFVSILRACAHMGFIDKGLHYFNAMLTEYGLEPQIEHYSCMIDIIG 728
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
R+G + EA + I+++P D+V+W LL C HGN+E + A + +++LEP ++ ++
Sbjct: 729 RSGRISEALKLIQEMPFEADAVIWRTLLSICKIHGNIEIAEKATNAILQLEPEDSSACIL 788
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTI 599
L+N++A AG W ++ R+ M+ ++ K PGCSWIE +DE+H F +++H R EEIY I
Sbjct: 789 LSNIYADAGMWGKVSEMRKMMRYNKLKKEPGCSWIEVKDEVHAFLVGNKTHPRYEEIYKI 848
Query: 600 I 600
+
Sbjct: 849 L 849
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 143/552 (25%), Positives = 244/552 (44%), Gaps = 80/552 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC LDD+ K+F +P N V
Sbjct: 220 MYAKCKRLDDSLKIFSEIP------------------------------------VKNWV 243
Query: 61 SWSAVIGGFTQNGYDEEAIGM-LFR-MQAEGLEPNARTLSSVLPACARLQKLSLGKEFHG 118
WSA+I G QN DE +G+ LF+ MQ G+ + +SV +CA L L +G + H
Sbjct: 244 CWSAIIAGCVQN--DEHILGLELFKEMQKVGIGVSQSIYASVFRSCAGLSALKVGTQLHA 301
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
+ + F S+ V +D+Y +CG + A +IF+ K+ + C
Sbjct: 302 HALKCDFGSDITVGTATLDMYAKCGSLADAQRIFNSLP-KHSLQC--------------- 345
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
+N++I G V N EA F+ LL++ G+ +
Sbjct: 346 -------------------YNAIIVGCVRNEKGFEALQFFQ-LLLKSGLGFNEISLSGAF 385
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
ACA + G+++H+L++ L+S+ V ++++MY + + L A FDE+E + +
Sbjct: 386 SACASIKGDLDGRQLHSLSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEMERRDAV 445
Query: 299 LGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYA 358
E N + LF+ ML L + PD +T G +L ACSS + G ++H
Sbjct: 446 SWNAVIAAHEQNGNEEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRI 505
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGI 418
I+ G D +G AL+DMY KCG ++ A+ + RI +VS NA++ + + H ++
Sbjct: 506 IKSGLGLDSFVGGALIDMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKHSEDAH 565
Query: 419 AHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLL 478
+ F +L +PD+ ++ L AC + S+ G + + ++ + + +VD+
Sbjct: 566 SFFYEMLKMSVKPDNFTYAIVLDACANLASVGLGKQIHGQIIKLELHSDVYITSTLVDMY 625
Query: 479 SRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE--FGQIAADRLIELEPNNTGN 536
S+ G + ++ +K P D V W A++ G HG E G +L + PN+
Sbjct: 626 SKCGNMQDSALVFEKAP-NKDFVTWNAMICGYAQHGLGEEALGYFERMQLENVRPNH-AT 683
Query: 537 YVMLANLFAYAG 548
+V + A+ G
Sbjct: 684 FVSILRACAHMG 695
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 126/450 (28%), Positives = 215/450 (47%), Gaps = 15/450 (3%)
Query: 90 LEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSAL 149
L RT S ++ C+ L GK+ H + +GF+ + ++ N L+ +Y RC + A
Sbjct: 39 LPTKIRTFSHIIQECSDYNSLKPGKQAHARMIVSGFIPDVYISNCLMKMYLRCSHLNYAY 98
Query: 150 KIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNS 209
K+F K S ++ +S NT+I GY + G + A E F +R ++SWNSM+SG++ N
Sbjct: 99 KVFEKMSQRDVISYNTMISGYADAGEMNLANEFFYDTP----KRDVVSWNSMLSGFLQNG 154
Query: 210 LYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVG 269
++ +F D+ + + TF VL AC+ + G ++H L + +G D G
Sbjct: 155 ECRKSIDVFLDMGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGFYKDVVTG 214
Query: 270 GALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLT 329
AL++MY + + L + F EI + G N ++LF EM + +
Sbjct: 215 SALLDMYAKCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEMQKVGIG 274
Query: 330 PDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLA 389
+ +C+ L+ ++ G Q+HA+A++C + SD+ +GTA +DMYAKCGSL A+
Sbjct: 275 VSQSIYASVFRSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQRI 334
Query: 390 YKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSI 449
+ + L NA++ + G E + F+ +L SG + IS A SAC
Sbjct: 335 FNSLPKHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSACASIKGD 394
Query: 450 KTGSEFFDLMAYYDVKPSLKHYTC----MVDLLSRAGELGEAYEFIKKIPMAPDSVMWGA 505
G + L VK +L+ C ++D+ + L EA ++ D+V W A
Sbjct: 395 LDGRQLHSL----SVKSTLRSNICVANSILDMYGKCEALSEACCMFDEME-RRDAVSWNA 449
Query: 506 LLGGCVSHGNLE--FGQIAADRLIELEPNN 533
++ +GN E A+ + +EP+
Sbjct: 450 VIAAHEQNGNEEETLNLFASMLRLRMEPDQ 479
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 139/517 (26%), Positives = 247/517 (47%), Gaps = 57/517 (11%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +C L+ A KVF+ M +RD +S+N++++ A G + A E D ++V
Sbjct: 87 MYLRCSHLNYAYKVFEKMSQRDVISYNTMISGYADAGEMNLANEFF-----YDTPKRDVV 141
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRM-QAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
SW++++ GF QNG ++I + M ++E + + T + VL AC+ L+ LG + HG
Sbjct: 142 SWNSMLSGFLQNGECRKSIDVFLDMGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQVHGL 201
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
I R GF + + L+D+Y +C + +LKIFS+ +KN V + II G +N
Sbjct: 202 IVRMGFYKDVVTGSALLDMYAKCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILG 261
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
ELF +M+ +G+ V S+Y SV
Sbjct: 262 LELFKEMQKVGIG-------------VSQSIY-----------------------ASVFR 285
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE--- 296
+CA +++L+ G ++HA A+ SD VG A ++MY + L AQ F+ +
Sbjct: 286 SCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQRIFNSLPKHSLQC 345
Query: 297 ---NLLGKMK-EDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGK 352
++G ++ E GFE A+Q F +L L + ++ SAC+S+ G+
Sbjct: 346 YNAIIVGCVRNEKGFE-------ALQFFQLLLKSGLGFNEISLSGAFSACASIKGDLDGR 398
Query: 353 QVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHG 412
Q+H+ +++ S++ + +++DMY KC +L A + + D VS NA++ A+ +G
Sbjct: 399 QLHSLSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQNG 458
Query: 413 HGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYT 472
+ +E + F +L PD ++ S L AC ++ +G E + + +
Sbjct: 459 NEEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKSGLGLDSFVGG 518
Query: 473 CMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
++D+ + G + EA + +I V W A++ G
Sbjct: 519 ALIDMYCKCGMIEEAKKIHDRIEQQT-MVSWNAIIAG 554
>gi|356552027|ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Glycine max]
Length = 986
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 210/615 (34%), Positives = 323/615 (52%), Gaps = 49/615 (7%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKCG+L A +F + R +LV
Sbjct: 303 MYGKCGALRHAHNMFDDLCHRG---------------------------------IQDLV 329
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGL-EPNARTLSSVLPACARLQKLSLGKEFHGY 119
SW++V+ + A+ + +M L P+ +L ++LPACA L G++ HG+
Sbjct: 330 SWNSVVSAYMWASDANTALALFHKMTTRHLMSPDVISLVNILPACASLAASLRGRQVHGF 389
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
R+G + + FV N +VD+Y +CG M A K+F + K+ VS N ++ GY + G + A
Sbjct: 390 SIRSGLVDDVFVGNAVVDMYAKCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHA 449
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
LF++M ++ +++W ++I+GY EA +FR + G P T S+L
Sbjct: 450 LSLFERMTEENIELDVVTWTAVITGYAQRGQGCEALDVFRQMC-DCGSRPNVVTLVSLLS 508
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGA--------LVEMYCRYQDLVAAQMAFDE 291
AC + +L GKE H AI L D GA L++MY + Q A+ FD
Sbjct: 509 ACVSVGALLHGKETHCYAIKFILNLDGPDPGADDLKVINGLIDMYAKCQSTEVARKMFDS 568
Query: 292 I--ENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLD--LTPDIYTVGIILSACSSLAT 347
+ ++ + + + G+ + NA+QLFS M +D + P+ +T+ L AC+ LA
Sbjct: 569 VSPKDRDVVTWTVMIGGYAQHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVACARLAA 628
Query: 348 MERGKQVHAYAIRCGYDSD-VHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLT 406
+ G+QVHAY +R Y S + + L+DMY+K G + A++ + + + VS +++T
Sbjct: 629 LRFGRQVHAYVLRNFYGSVMLFVANCLIDMYSKSGDVDTAQIVFDNMPQRNAVSWTSLMT 688
Query: 407 AYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVK 465
Y MHG G++ + F + PD I+FL L AC H+G + G FF+ M+ + V
Sbjct: 689 GYGMHGRGEDALRVFDEMRKVPLVPDGITFLVVLYACSHSGMVDHGINFFNRMSKDFGVD 748
Query: 466 PSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADR 525
P +HY CMVDL RAG LGEA + I ++PM P V+W ALL C H N+E G+ AA+R
Sbjct: 749 PGPEHYACMVDLWGRAGRLGEAMKLINEMPMEPTPVVWVALLSACRLHSNVELGEFAANR 808
Query: 526 LIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRA 585
L+ELE N G+Y +L+N++A A RW D+AR R MK + K PGCSWI+ R + F
Sbjct: 809 LLELESGNDGSYTLLSNIYANARRWKDVARIRYTMKRTGIKKRPGCSWIQGRKGVATFYV 868
Query: 586 SDRSHDRSEEIYTII 600
DRSH +S++IY +
Sbjct: 869 GDRSHPQSQQIYETL 883
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 150/565 (26%), Positives = 249/565 (44%), Gaps = 89/565 (15%)
Query: 27 NSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQ 86
N + T A+N A+ LER L ++ W+ +I G + + +M+
Sbjct: 196 NLIGTYIASNSTAY-AILLLER---LPPSPSSVFWWNQLIRRALHLGSPRDVFTLYRQMK 251
Query: 87 AEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDML 146
+ G P+ T V ACA L LSLG H ++R+GF SN FV N +V +Y +CG
Sbjct: 252 SLGWTPDHYTFPFVFKACANLSSLSLGASLHATVSRSGFASNVFVCNAVVSMYGKCG--- 308
Query: 147 SALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYV 206
AL+ A +FD + H G+Q ++SWNS++S Y+
Sbjct: 309 -ALR---------------------------HAHNMFDDLCHRGIQ-DLVSWNSVVSAYM 339
Query: 207 DNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDT 266
S + A ++F + R + P + ++L ACA + + +G+++H +I GL D
Sbjct: 340 WASDANTALALFHKMTTRHLMSPDVISLVNILPACASLAASLRGRQVHGFSIRSGLVDDV 399
Query: 267 FVGGALVEMYCRYQDLVAAQMAFD---------------------EIENIENLLGKMKED 305
FVG A+V+MY + + A F +E+ +L +M E+
Sbjct: 400 FVGNAVVDMYAKCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEE 459
Query: 306 GFEPNVYTWN--------------AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG 351
E +V TW A+ +F +M P++ T+ +LSAC S+ + G
Sbjct: 460 NIELDVVTWTAVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHG 519
Query: 352 KQVHAYAIRC-----GYDS---DVHIGTALVDMYAKCGSLKHARLAYKRISTP--DLVSQ 401
K+ H YAI+ G D D+ + L+DMYAKC S + AR + +S D+V+
Sbjct: 520 KETHCYAIKFILNLDGPDPGADDLKVINGLIDMYAKCQSTEVARKMFDSVSPKDRDVVTW 579
Query: 402 NAMLTAYAMHGHGKEGIAHFRRILA--SGFRPDHISFLSALSACVHAGSIKTGSEF--FD 457
M+ YA HG + F + +P+ + AL AC +++ G + +
Sbjct: 580 TVMIGGYAQHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVACARLAALRFGRQVHAYV 639
Query: 458 LMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
L +Y L C++D+ S++G++ A +P ++V W +L+ G HG E
Sbjct: 640 LRNFYG-SVMLFVANCLIDMYSKSGDVDTAQIVFDNMPQR-NAVSWTSLMTGYGMHGRGE 697
Query: 518 FGQIAAD--RLIELEPNNTGNYVML 540
D R + L P+ V+L
Sbjct: 698 DALRVFDEMRKVPLVPDGITFLVVL 722
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 150/330 (45%), Gaps = 26/330 (7%)
Query: 217 MFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMY 276
+ R ++ + + FT + L++CA + + KE ++LA A L + + G L +
Sbjct: 137 LLRCFPIKSKLLQSQFT-NTRLLSCATI-PITALKECNSLAHAKLLHQQSIMQGLLFHLA 194
Query: 277 CRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAM--------------QLFSE 322
+L+ +A + LL ++ +V+ WN + L+ +
Sbjct: 195 ---TNLIGTYIASNSTAYAILLLERLPPS--PSSVFWWNQLIRRALHLGSPRDVFTLYRQ 249
Query: 323 MLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGS 382
M SL TPD YT + AC++L+++ G +HA R G+ S+V + A+V MY KCG+
Sbjct: 250 MKSLGWTPDHYTFPFVFKACANLSSLSLGASLHATVSRSGFASNVFVCNAVVSMYGKCGA 309
Query: 383 LKHARLAYKRI---STPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGF-RPDHISFLS 438
L+HA + + DLVS N++++AY +A F ++ PD IS ++
Sbjct: 310 LRHAHNMFDDLCHRGIQDLVSWNSVVSAYMWASDANTALALFHKMTTRHLMSPDVISLVN 369
Query: 439 ALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAP 498
L AC + G + + + +VD+ ++ G++ EA + +++
Sbjct: 370 ILPACASLAASLRGRQVHGFSIRSGLVDDVFVGNAVVDMYAKCGKMEEANKVFQRMKFK- 428
Query: 499 DSVMWGALLGGCVSHGNLEFGQIAADRLIE 528
D V W A++ G G LE +R+ E
Sbjct: 429 DVVSWNAMVTGYSQAGRLEHALSLFERMTE 458
>gi|15223802|ref|NP_173449.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806503|sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230
gi|332191832|gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 760
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 192/581 (33%), Positives = 315/581 (54%), Gaps = 37/581 (6%)
Query: 57 PNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEF 116
P + S+S++I T+ ++IG+ RM + GL P++ L ++ CA L +GK+
Sbjct: 79 PTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQI 138
Query: 117 HGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNV 176
H +G + FV + +Y RCG M A K+F + S K+ V+C+ ++ Y G +
Sbjct: 139 HCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCL 198
Query: 177 AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGS 236
E + +ME G++ I+SWN ++SG+ + + EA MF+ + G P T S
Sbjct: 199 EEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKI-HHLGFCPDQVTVSS 257
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
VL + D L G+ IH I GL D V A+++MY + + F++ E +E
Sbjct: 258 VLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMME 317
Query: 297 ---------------------NLLGKMKEDGFEPNVYTWN--------------AMQLFS 321
+ KE E NV +W A++LF
Sbjct: 318 AGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFR 377
Query: 322 EMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCG 381
EM + P+ T+ +L AC ++A + G+ H +A+R +VH+G+AL+DMYAKCG
Sbjct: 378 EMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCG 437
Query: 382 SLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALS 441
+ +++ + + T +LV N+++ ++MHG KE ++ F ++ + +PD ISF S LS
Sbjct: 438 RINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLS 497
Query: 442 ACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDS 500
AC G G ++F +M+ Y +KP L+HY+CMV+LL RAG+L EAY+ IK++P PDS
Sbjct: 498 ACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDS 557
Query: 501 VMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKM 560
+WGALL C N++ +IAA++L LEP N G YV+L+N++A G W+++ R KM
Sbjct: 558 CVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKM 617
Query: 561 KDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
+ + K+PGCSWI+ ++ ++ A D+SH + ++I +D
Sbjct: 618 ESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMD 658
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 114/409 (27%), Positives = 212/409 (51%), Gaps = 4/409 (0%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +CG + DA+KVF M ++D V+ ++++ A A G + E + L M S E N+V
Sbjct: 160 MYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEA-NIV 218
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ ++ GF ++GY +EA+ M ++ G P+ T+SSVLP+ + L++G+ HGY+
Sbjct: 219 SWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYV 278
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G + + V++ ++D+Y + G + + +F++F + CN I G NG V +A
Sbjct: 279 IKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKAL 338
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
E+F+ + ++ ++SW S+I+G N EA +FR++ + G++P T S+L A
Sbjct: 339 EMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVA-GVKPNHVTIPSMLPA 397
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C ++ +L G+ H A+ + L + VG AL++MY + + +Q+ F+ + +
Sbjct: 398 CGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCW 457
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG-KQVHAYAI 359
+GF + M +F ++ L PD + +LSAC + + G K +
Sbjct: 458 NSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSE 517
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNAMLTA 407
G + + +V++ + G L+ A K + PD A+L +
Sbjct: 518 EYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNS 566
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 135/340 (39%), Gaps = 79/340 (23%)
Query: 249 KGKEIHALAIALGLQSDTFVGGALVEMYCRYQ-----DLVAAQMAFDEIENIENLLGKMK 303
K + HA + G Q+D ++ L+ Y Y DLV + I + +L+ +
Sbjct: 33 KTTQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALT 92
Query: 304 EDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGY 363
+ ++T ++ +FS M S L PD + + + C+ L+ + GKQ+H + G
Sbjct: 93 ----KAKLFT-QSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGL 147
Query: 364 DSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMH------------ 411
D D + ++ MY +CG + AR + R+S D+V+ +A+L AYA
Sbjct: 148 DMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSE 207
Query: 412 -----------------------GHGKEGIAHFRRILASGFRPDHISFLSALSAC----- 443
G+ KE + F++I GF PD ++ S L +
Sbjct: 208 MESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEM 267
Query: 444 ------VHAGSIKTG--------SEFFDLMA----YYDVKPSLKHYTCM--------VDL 477
+H IK G S D+ Y + + M +
Sbjct: 268 LNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITG 327
Query: 478 LSRAGELGEA---YEFIKKIPMAPDSVMWGALLGGCVSHG 514
LSR G + +A +E K+ M + V W +++ GC +G
Sbjct: 328 LSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNG 367
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 63/168 (37%), Gaps = 1/168 (0%)
Query: 350 RGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYA 409
+ Q HA ++ G +D +I L+ Y+ A L + I P + S ++++ A
Sbjct: 33 KTTQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALT 92
Query: 410 MHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLK 469
+ I F R+ + G PD + C + K G + + +
Sbjct: 93 KAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAF 152
Query: 470 HYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
M + R G +G+A + ++ D V ALL G LE
Sbjct: 153 VQGSMFHMYMRCGRMGDARKVFDRMS-DKDVVTCSALLCAYARKGCLE 199
>gi|357502643|ref|XP_003621610.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496625|gb|AES77828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 881
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 217/668 (32%), Positives = 330/668 (49%), Gaps = 112/668 (16%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY C LD A +F MPER N V
Sbjct: 214 MYSTCKKLDHAFNIFCEMPER------------------------------------NSV 237
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
WSAVI G+ +N E + + M EG+ + T +S +CA L LG + H Y
Sbjct: 238 CWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAFRSCAGLSAFELGTQLHAYA 297
Query: 121 TRNGF-----------------------------MSNPFVV--NGLVDVYRRCGDMLSAL 149
+ F NP N L+ Y R +L AL
Sbjct: 298 LKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQVLEAL 357
Query: 150 KIFSKF--------------------SIKN----------EVSC---------NTIIVGY 170
+IF +IK V C NTI+ Y
Sbjct: 358 EIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVANTILDMY 417
Query: 171 CENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPT 230
+ G + EA +FD ME + +SWN++I+ + N +E ++F +L R +EP
Sbjct: 418 AKCGALMEACLIFDDME----IKDAVSWNAIIAAHEQNEHVEETLALFVSML-RSTMEPD 472
Query: 231 SFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFD 290
+TFGSV+ ACA +L G E+H I G+ D FVG A+++MYC+ LV A+ +
Sbjct: 473 DYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHE 532
Query: 291 EIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMER 350
+E + GF NA+ FS ML + + PD +T +L C++LAT+E
Sbjct: 533 RLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATVLDICANLATVEL 592
Query: 351 GKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAM 410
GKQ+H ++ SDV+I + +VDMY+KCG+++ +R+ +++ D V+ +AM+ AYA
Sbjct: 593 GKQIHGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAPKRDYVTWSAMICAYAY 652
Query: 411 HGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFF-DLMAYYDVKPSLK 469
HG G++ I F + +P+H F+S L AC H G + G +F ++ ++Y + P ++
Sbjct: 653 HGLGEDAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFVDKGLHYFREMRSHYGLDPQME 712
Query: 470 HYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIEL 529
HY+CMVDLL R+G++ EA E I+ +P D V+W LLG C GN+E + AA+ L++L
Sbjct: 713 HYSCMVDLLGRSGQVNEALELIESMPFEADDVIWRTLLGICRLQGNVEVAEKAANSLLQL 772
Query: 530 EPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRS 589
+P ++ YV+L+N++A AG W ++A+ R MK+ ++ K PGCSWI+ RDE+H F D++
Sbjct: 773 DPQDSSAYVLLSNVYAIAGMWGEVAKIRSFMKNYKLKKEPGCSWIQVRDEVHAFLVGDKA 832
Query: 590 HDRSEEIY 597
H RSEEIY
Sbjct: 833 HPRSEEIY 840
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 128/425 (30%), Positives = 202/425 (47%), Gaps = 15/425 (3%)
Query: 90 LEPNAR-TLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSA 148
+ P + T S + C+ L+ ++ GK+ H IT GF+ FV N L+ Y +C ++ A
Sbjct: 33 MNPTKKLTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYA 92
Query: 149 LKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDN 208
+F K ++ +S NT+I GY GN+ A+ LFD M +R ++SWNSM+S Y+ N
Sbjct: 93 FNVFDKMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMP----ERDVVSWNSMLSCYLQN 148
Query: 209 SLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFV 268
+ ++ +F + + + I+ TF VL AC + G ++H LAI +G SD
Sbjct: 149 GFHRKSIEIFTKMRLLE-IQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVT 207
Query: 269 GGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDL 328
G ALV+MY + L A F E+ ++ G+ N ++L+ ML +
Sbjct: 208 GTALVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGM 267
Query: 329 TPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARL 388
T +C+ L+ E G Q+HAYA++ + D +GTA +DMYAKC + AR
Sbjct: 268 GVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARK 327
Query: 389 AYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGS 448
+ P S NA++ YA E + FR + S D IS AL+AC
Sbjct: 328 VFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKG 387
Query: 449 IKTGSEFFDLMAYYDVKPSLKHYTC----MVDLLSRAGELGEAYEFIKKIPMAPDSVMWG 504
G + L VK L C ++D+ ++ G L EA + + D+V W
Sbjct: 388 YLEGIQLHGLA----VKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEI-KDAVSWN 442
Query: 505 ALLGG 509
A++
Sbjct: 443 AIIAA 447
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 129/508 (25%), Positives = 231/508 (45%), Gaps = 42/508 (8%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y KC +L+ A VF MP+RD +SWN+++ A G + A + M D +VS
Sbjct: 83 YCKCLNLNYAFNVFDKMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERD-----VVS 137
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W++++ + QNG+ ++I + +M+ ++ + T + VL AC ++ LG + H
Sbjct: 138 WNSMLSCYLQNGFHRKSIEIFTKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAI 197
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
+ GF S+ LVD+Y C + A IF + +N V + +I GY N E +
Sbjct: 198 QMGFDSDVVTGTALVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLK 257
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
L+ M + +G+ + TF S +C
Sbjct: 258 LYKVM------------------------------------LDEGMGVSQATFASAFRSC 281
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK 301
A +++ G ++HA A+ D VG A ++MY + +V A+ F+ N
Sbjct: 282 AGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHN 341
Query: 302 MKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRC 361
G+ A+++F + L D ++ L+ACS++ G Q+H A++C
Sbjct: 342 ALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGLAVKC 401
Query: 362 GYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHF 421
G D ++ + ++DMYAKCG+L A L + + D VS NA++ A+ + H +E +A F
Sbjct: 402 GLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLALF 461
Query: 422 RRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRA 481
+L S PD +F S + AC ++ G E + + + ++D+ +
Sbjct: 462 VSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKC 521
Query: 482 GELGEAYEFIKKIPMAPDSVMWGALLGG 509
G L EA + +++ +V W +++ G
Sbjct: 522 GMLVEAEKIHERLE-ERTTVSWNSIISG 548
>gi|242082744|ref|XP_002441797.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
gi|241942490|gb|EES15635.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
Length = 839
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 218/669 (32%), Positives = 335/669 (50%), Gaps = 106/669 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKC SL+DA + F M ER N V
Sbjct: 180 MYGKCRSLEDALRFFHGMGER------------------------------------NSV 203
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW A I G QN + + +MQ GL + +SV +CA + LS ++ H +
Sbjct: 204 SWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVFRSCAAITCLSTARQLHAHA 263
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEV--SCNTIIVGYCENGNVAE 178
+N F ++ V +VDVY + ++ A + F FS+ N +CN ++VG G AE
Sbjct: 264 IKNKFSADRVVGTAIVDVYAKADSLVDARRAF--FSLPNHTVQACNAMMVGLVRTGLGAE 321
Query: 179 ARELFDQMEHLGVQRGIISWNSMIS------GY--------------------VDNSLYD 212
A +LF M G+ ++S + + S GY V N++ D
Sbjct: 322 ALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCLAIKSGFDVDVCVRNAILD 381
Query: 213 ---------EAFSMFRDLLMRD------------------------------GIEPTSFT 233
EA+ +F+++ RD G+EP FT
Sbjct: 382 LYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAYLNEMLRYGMEPDDFT 441
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
+GSVL ACA + SL G +H AI GL D FV +V+MYC+ + AQ D I
Sbjct: 442 YGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMITEAQKLHDRIG 501
Query: 294 NIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ 353
E + GF N + A + FSEML + + PD +T +L C++LAT+E GKQ
Sbjct: 502 GQELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKPDHFTYATVLDTCANLATIELGKQ 561
Query: 354 VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGH 413
+H I+ D +I + LVDMYAKCG++ + L +++ D VS NAM+ YA+HG
Sbjct: 562 IHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKAQKLDFVSWNAMICGYALHGQ 621
Query: 414 GKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYT 472
G E + F R+ + P+H +F++ L AC H G + G +F LM + Y ++P L+H+
Sbjct: 622 GFEALEMFERMQQANVVPNHATFVAVLRACSHVGLLDDGCRYFYLMTSRYKLEPQLEHFA 681
Query: 473 CMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPN 532
CMVD+L R+ EA +FI+ +P+ D+V+W LL C ++E + AA ++ L+P+
Sbjct: 682 CMVDILGRSKGPQEALKFIRSMPLEADAVIWKTLLSICKIRQDVEVAETAASNVLRLDPD 741
Query: 533 NTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDR 592
++ Y++L+N++A +G+W D++RTR+ M+ R+ K PGCSWIE + E+H F A D+ H R
Sbjct: 742 DSSVYILLSNVYAESGKWVDVSRTRRLMRQGRLKKEPGCSWIEVQSEMHGFLAGDKVHPR 801
Query: 593 SEEIYTIID 601
S E+Y +++
Sbjct: 802 SREVYEMLN 810
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 143/509 (28%), Positives = 234/509 (45%), Gaps = 42/509 (8%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +CG A+ VF +MP RD VSWN+++TA A G A M P++V
Sbjct: 48 MYARCGGAAHARGVFDVMPHRDTVSWNTMLTAYAHAGDTGAAASLFGAMPD-----PDVV 102
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A++ G+ Q G +++G+ M G+ P+ TL+ +L AC L+ L+LG + H
Sbjct: 103 SWNALLSGYCQRGMFRDSVGLSVEMARRGVAPDRTTLAVLLKACGGLEDLALGVQIHAVA 162
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G + + LVD+Y +C + AL+ F +N VS I G +N
Sbjct: 163 VKTGLEMDVRAGSALVDMYGKCRSLEDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGL 222
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
ELF QM+ LG+ G+ + + SV +
Sbjct: 223 ELFVQMQRLGL----------------------------------GVSQPA--YASVFRS 246
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA + L +++HA AI +D VG A+V++Y + LV A+ AF + N
Sbjct: 247 CAAITCLSTARQLHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQAC 306
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G A+QLF M + D+ ++ + SAC+ + +G QVH AI+
Sbjct: 307 NAMMVGLVRTGLGAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCLAIK 366
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
G+D DV + A++D+Y KC +L A L ++ + D VS NA++ A + ++ IA+
Sbjct: 367 SGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAY 426
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSR 480
+L G PD ++ S L AC S++ GS + + +VD+ +
Sbjct: 427 LNEMLRYGMEPDDFTYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVSSTVVDMYCK 486
Query: 481 AGELGEAYEFIKKIPMAPDSVMWGALLGG 509
G + EA + +I + V W +++ G
Sbjct: 487 CGMITEAQKLHDRIG-GQELVSWNSIISG 514
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 128/471 (27%), Positives = 211/471 (44%), Gaps = 45/471 (9%)
Query: 96 TLSSVLPACARLQK--LSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFS 153
T S + CA + L+ G+ H + +GFM FV N L+ +Y RCG A +F
Sbjct: 4 TFSHLYQLCAGAGRSALATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGVFD 63
Query: 154 KFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDE 213
++ VS NT++ Y G+ A LF M ++SWN+++SGY ++ +
Sbjct: 64 VMPHRDTVSWNTMLTAYAHAGDTGAAASLFGAMP----DPDVVSWNALLSGYCQRGMFRD 119
Query: 214 AFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALV 273
+ + + + R G+ P T +L AC + L G +IHA+A+ GL+ D G ALV
Sbjct: 120 SVGLSVE-MARRGVAPDRTTLAVLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALV 178
Query: 274 EMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIY 333
+MY + + L A F + ++ G N ++LF +M L L
Sbjct: 179 DMYGKCRSLEDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQP 238
Query: 334 TVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRI 393
+ +C+++ + +Q+HA+AI+ + +D +GTA+VD+YAK SL AR A+ +
Sbjct: 239 AYASVFRSCAAITCLSTARQLHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSL 298
Query: 394 STPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSAC---------- 443
+ + NAM+ G G E + F+ + SG D +S SAC
Sbjct: 299 PNHTVQACNAMMVGLVRTGLGAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGL 358
Query: 444 -VHAGSIKTG--------SEFFDLMAYYDVKPSLKHYTCMVDLLSR----------AGEL 484
VH +IK+G + DL Y K ++ Y ++ R A E
Sbjct: 359 QVHCLAIKSGFDVDVCVRNAILDL--YGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQ 416
Query: 485 GEAYE-------FIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIE 528
E YE + + M PD +G++L C +LE+G + + I+
Sbjct: 417 NECYEDTIAYLNEMLRYGMEPDDFTYGSVLKACAGLQSLEYGSVVHGKAIK 467
>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
[Vitis vinifera]
Length = 785
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 204/596 (34%), Positives = 307/596 (51%), Gaps = 72/596 (12%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y KCG L +A+++F M RD V+WN+++ C+ GL
Sbjct: 154 YAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLC---------------------- 191
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
++A+ ++ +MQ EG+ PN+ T+ VLP + L GK HGY
Sbjct: 192 --------------DDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCV 237
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
R F + V GL+D+Y +C +L A KIF ++NEVS + +I GY + + EA E
Sbjct: 238 RRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALE 297
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
LFDQM +++D ++PT T GSVL AC
Sbjct: 298 LFDQM-----------------------------------ILKDAMDPTPVTLGSVLRAC 322
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK 301
A + L +G+++H I LG D +G L+ MY + + A FDE+ +++
Sbjct: 323 AKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEMNPKDSVSFS 382
Query: 302 MKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRC 361
G N A+ +F M + PD+ T+ +L ACS LA ++ G H Y I
Sbjct: 383 AIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVR 442
Query: 362 GYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHF 421
G+ +D I AL+DMY+KCG + AR + R+ D+VS NAM+ Y +HG G E + F
Sbjct: 443 GFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLF 502
Query: 422 RRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSR 480
+LA G +PD I+F+ LS+C H+G + G +FD M+ + + P ++H CMVD+L R
Sbjct: 503 HDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGR 562
Query: 481 AGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVML 540
AG + EA+ FI+ +P PD +W ALL C H N+E G+ + ++ L P +TGN+V+L
Sbjct: 563 AGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLL 622
Query: 541 ANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEI 596
+N+++ AGRW D A R KD + K PGCSWIE +H F D+SH + +I
Sbjct: 623 SNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQI 678
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 126/463 (27%), Positives = 211/463 (45%), Gaps = 44/463 (9%)
Query: 56 TPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKE 115
P+++ W+ +I + NG + AI + M G+ PN T VL AC+ L + G E
Sbjct: 71 NPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVE 130
Query: 116 FHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGN 175
H + G S+ FV LVD Y +CG ++ A ++FS S ++ V+ N +I G G
Sbjct: 131 IHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGL 190
Query: 176 VAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFG 235
+A +L QM+ +GI P S T
Sbjct: 191 CDDAVQLIMQMQ------------------------------------EEGICPNSSTIV 214
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
VL + +L GK +H + + VG L++MY + Q L+ A+ FD +
Sbjct: 215 GVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVR 274
Query: 296 ENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLD-LTPDIYTVGIILSACSSLATMERGKQV 354
+ G+ + A++LF +M+ D + P T+G +L AC+ L + RG+++
Sbjct: 275 NEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKL 334
Query: 355 HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHG 414
H Y I+ G D+ +G L+ MYAKCG + A + ++ D VS +A+++ +G+
Sbjct: 335 HCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEMNPKDSVSFSAIVSGCVQNGNA 394
Query: 415 KEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKP-SLKHYTC 473
++ FR + SG PD + L L AC H +++ G F Y V+ + C
Sbjct: 395 AVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHG---FCSHGYLIVRGFATDTLIC 451
Query: 474 --MVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
++D+ S+ G++ A E ++ D V W A++ G HG
Sbjct: 452 NALIDMYSKCGKISFAREVFNRMD-RHDIVSWNAMIIGYGIHG 493
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 112/418 (26%), Positives = 191/418 (45%), Gaps = 40/418 (9%)
Query: 100 VLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKN 159
+L AC + + L+ K+ H + +N ++ V++ L +Y
Sbjct: 14 LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLY-------------------- 53
Query: 160 EVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFR 219
+SCN +++ AR LFD++ + V I WN +I Y N +D A ++
Sbjct: 54 -LSCNQVVL----------ARRLFDEIPNPSV----ILWNQIIRAYAWNGPFDGAIDLYH 98
Query: 220 DLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRY 279
+L G+ P +T+ VL AC+ + ++ G EIH+ A GL+SD FV ALV+ Y +
Sbjct: 99 SML-HLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKC 157
Query: 280 QDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIIL 339
LV AQ F + + + + G +A+QL +M + P+ T+ +L
Sbjct: 158 GILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVL 217
Query: 340 SACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLV 399
+ GK +H Y +R +D+ V +GT L+DMYAKC L +AR + + + V
Sbjct: 218 PTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEV 277
Query: 400 SQNAMLTAYAMHGHGKEGIAHF-RRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDL 458
S +AM+ Y KE + F + IL P ++ S L AC + G +
Sbjct: 278 SWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCY 337
Query: 459 MAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAP-DSVMWGALLGGCVSHGN 515
+ + ++ + ++ G + +A F + M P DSV + A++ GCV +GN
Sbjct: 338 IIKLGSVLDILLGNTLLSMYAKCGVIDDAIRFFDE--MNPKDSVSFSAIVSGCVQNGN 393
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 104/413 (25%), Positives = 179/413 (43%), Gaps = 73/413 (17%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC L A+K+F +M R+ VSW++++ A+ + EALE ++M
Sbjct: 254 MYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQM----------- 302
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+ + ++P TL SVL ACA+L LS G++ H YI
Sbjct: 303 ------------------------ILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYI 338
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G + + + N L+ +Y +CG + A++ F + + K+ VS + I+ G +NGN A A
Sbjct: 339 IKLGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEMNPKDSVSFSAIVSGCVQNGNAAVAL 398
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+F M+ GI+P T VL A
Sbjct: 399 SIFRMMQ------------------------------------LSGIDPDLTTMLGVLPA 422
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C+ + +L+ G H I G +DT + AL++MY + + A+ F+ ++ + +
Sbjct: 423 CSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSW 482
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACS-SLATMERGKQVHAYAI 359
G+ + A+ LF ++L+L L PD T +LS+CS S ME A +
Sbjct: 483 NAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSR 542
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNAMLTAYAMH 411
+ +VD+ + G + A + + PD+ +A+L+A +H
Sbjct: 543 DFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIH 595
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 151/327 (46%), Gaps = 12/327 (3%)
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
+L AC SL + K+IH + +D+ V L +Y +V A+ FDEI N
Sbjct: 14 LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73
Query: 297 NLLGKMKEDGFEPNVYTWN-----AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG 351
+L Y WN A+ L+ ML L + P+ YT +L ACS L +E G
Sbjct: 74 VILWNQI-----IRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDG 128
Query: 352 KQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMH 411
++H++A G +SDV + TALVD YAKCG L A+ + +S D+V+ NAM+ +++
Sbjct: 129 VEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLY 188
Query: 412 GHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHY 471
G + + ++ G P+ + + L A ++ G +
Sbjct: 189 GLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVG 248
Query: 472 TCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEP 531
T ++D+ ++ L A + I + + V W A++GG V+ ++ D++I L+
Sbjct: 249 TGLLDMYAKCQCLLYARK-IFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMI-LKD 306
Query: 532 NNTGNYVMLANLFAYAGRWSDLARTRQ 558
V L ++ + +DL+R R+
Sbjct: 307 AMDPTPVTLGSVLRACAKLTDLSRGRK 333
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 67/157 (42%), Gaps = 34/157 (21%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG + A++VF M D VSWN+++ +GL +EAL + +L P+ +
Sbjct: 457 MYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLAL-GLKPDDI 515
Query: 61 SWSAVIGGFTQNG--------YD------------EEAIGMLFRMQAEGL---------- 90
++ ++ + +G +D E I M+ + GL
Sbjct: 516 TFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRN 575
Query: 91 ---EPNARTLSSVLPACARLQKLSLGKEFHGYITRNG 124
EP+ R S++L AC + + LG+E I G
Sbjct: 576 MPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLG 612
>gi|125588087|gb|EAZ28751.1| hypothetical protein OsJ_12773 [Oryza sativa Japonica Group]
Length = 698
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 200/634 (31%), Positives = 324/634 (51%), Gaps = 75/634 (11%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
M+ K G L DA+ VF MPERD VS
Sbjct: 1 MFAKSGRLADARGVFAEMPERDAVS----------------------------------- 25
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
W+ ++ G + G EAI L M A+G P TL++VL +CA Q ++G++ H ++
Sbjct: 26 -WTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFV 84
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G S V N ++++Y +CGD +A +F + +++ S N ++ G + A
Sbjct: 85 VKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAE 144
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LF+ M R I+SWN+MI+GY N L +A +F +L + P FT SVL A
Sbjct: 145 SLFESMP----DRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSA 200
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDE--------- 291
CA++ ++R GK++HA + + ++ V AL+ Y + + A+ D+
Sbjct: 201 CANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVI 260
Query: 292 --------------IENIENLLGKMKED----------GFEPNVYTWNAMQLFSEMLSLD 327
+E+ + G M G+E N A+ LF M++
Sbjct: 261 SFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCG 320
Query: 328 LTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHAR 387
P+ YT+ +LS C+SLA ++ GKQ+H AIR + + A++ MYA+ GS AR
Sbjct: 321 PEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWAR 380
Query: 388 LAYKRIS-TPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHA 446
+ ++ + ++ +M+ A A HG G+E + F +L +G PD I+++ LSAC HA
Sbjct: 381 RMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHA 440
Query: 447 GSIKTGSEFFD-LMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGA 505
G + G ++D + + + P + HY CMVDLL+RAG EA EFI+++P+ PD++ WG+
Sbjct: 441 GFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGS 500
Query: 506 LLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRM 565
LL C H N E ++AA++L+ ++PNN+G Y +AN+++ GRWSD AR + K++ +
Sbjct: 501 LLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKARKEKAV 560
Query: 566 HKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTI 599
K G SW R +IH F A D H + + +Y +
Sbjct: 561 RKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAM 594
>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 809
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 202/602 (33%), Positives = 318/602 (52%), Gaps = 73/602 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC + +A+KVF MPERD LV
Sbjct: 179 MYAKCRQVHEARKVFDRMPERD------------------------------------LV 202
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ ++ G++QNG A+ M+ M E L+P+ T+ SVLPA + L+ + +GKE HGY
Sbjct: 203 SWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSALRLIRIGKEIHGYA 262
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R GF S + LVD+Y +CG + +A R
Sbjct: 263 MRAGFDSLVNIATALVDMYAKCGSLKTA-------------------------------R 291
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LFD M ++R ++SWNSMI YV N EA +F+ +L +G++PT + L A
Sbjct: 292 LLFDGM----LERNVVSWNSMIDAYVQNENPKEAMVIFQKML-DEGVKPTDVSVMGALHA 346
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CAD+ L +G+ IH L++ L L + V +L+ MYC+ +++ A F ++++ +
Sbjct: 347 CADLGDLERGRFIHKLSVELELDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTIVSW 406
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
GF N A+ FS+M + + PD +T +++A + L+ K +H +R
Sbjct: 407 NAMILGFAQNGRPIEALNYFSQMQARTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMR 466
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
D +V + TALVDMYAKCG++ ARL + +S + + NAM+ Y HG GK +
Sbjct: 467 NCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGIGKAALEL 526
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLS 479
F + RP+ ++FLS +SAC H+G ++ G + F +M Y ++PS+ HY MVDLL
Sbjct: 527 FEEMQKGTIRPNGVTFLSVISACSHSGLVEAGLKCFHMMKENYSIEPSMDHYGAMVDLLG 586
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
RAG L EA++FI ++P+ P ++GA+LG C H N+ F + A+RL EL P + G +V+
Sbjct: 587 RAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKVAERLFELNPEDGGYHVL 646
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTI 599
LAN++ A W + + R M + + K+PGCS +E ++E+H F + +H S++IY
Sbjct: 647 LANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPSSKKIYAF 706
Query: 600 ID 601
++
Sbjct: 707 LE 708
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 105/346 (30%), Positives = 177/346 (51%), Gaps = 8/346 (2%)
Query: 170 YCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDG-IE 228
+C G+V EA +F+ ++ ++ + + +M+ G+ S D+A F + MRD +E
Sbjct: 79 FCRYGSVDEAARVFEPID----KKLNVLYYTMLKGFAKVSDLDKALKFF--VRMRDDEVE 132
Query: 229 PTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMA 288
P + F +L C D LR GKEIH L + G D F L MY + + + A+
Sbjct: 133 PVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEARKV 192
Query: 289 FDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATM 348
FD + + + G+ N A+++ + M +L P T+ +L A S+L +
Sbjct: 193 FDRMPERDLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSALRLI 252
Query: 349 ERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAY 408
GK++H YA+R G+DS V+I TALVDMYAKCGSLK ARL + + ++VS N+M+ AY
Sbjct: 253 RIGKEIHGYAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAY 312
Query: 409 AMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSL 468
+ + KE + F+++L G +P +S + AL AC G ++ G L ++ ++
Sbjct: 313 VQNENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELELDRNV 372
Query: 469 KHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
++ + + E+ A K+ + V W A++ G +G
Sbjct: 373 SVVNSLISMYCKCKEVDTAASMFGKL-QSRTIVSWNAMILGFAQNG 417
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 125/531 (23%), Positives = 237/531 (44%), Gaps = 49/531 (9%)
Query: 4 KCGSLDDAKKVFKMMPE----RDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNL 59
+C SL + + + ++ + ++ + +V+ G V EA E + N
Sbjct: 46 RCSSLKELRHILPLIFKNGLYQEHLFQTKLVSLFCRYGSVDEAARVFEPIDKKLN----- 100
Query: 60 VSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
V + ++ GF + ++A+ RM+ + +EP + +L C +L +GKE HG
Sbjct: 101 VLYYTMLKGFAKVSDLDKALKFFVRMRDDEVEPVVYNFTYLLKVCGDEAELRVGKEIHGL 160
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ ++GF + F + GL ++Y +C + A K+F + ++ VS NTI+ GY +NG A
Sbjct: 161 LVKSGFSLDLFAMTGLENMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMARMA 220
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
E+ +L+ + ++P+ T SVL
Sbjct: 221 LEMV------------------------------------NLMCEENLKPSFITIVSVLP 244
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
A + + +R GKEIH A+ G S + ALV+MY + L A++ FD + +
Sbjct: 245 AVSALRLIRIGKEIHGYAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVS 304
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
D + N AM +F +ML + P +V L AC+ L +ERG+ +H ++
Sbjct: 305 WNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSV 364
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
D +V + +L+ MY KC + A + ++ + +VS NAM+ +A +G E +
Sbjct: 365 ELELDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEALN 424
Query: 420 HFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLS 479
+F ++ A +PD +++S ++A ++ + ++ T +VD+ +
Sbjct: 425 YFSQMQARTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRNCLDKNVFVTTALVDMYA 484
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELE 530
+ G + A I + W A++ G +HG G+ A + E++
Sbjct: 485 KCGAIMIA-RLIFDMMSERHVTTWNAMIDGYGTHG---IGKAALELFEEMQ 531
>gi|242032827|ref|XP_002463808.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
gi|241917662|gb|EER90806.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
Length = 803
Score = 370 bits (949), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 199/628 (31%), Positives = 338/628 (53%), Gaps = 46/628 (7%)
Query: 6 GSLDDAKKVFKMMP--ERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWS 63
G +A+++F +P R+ +WNS+++ A +G + +A +M D VSW+
Sbjct: 78 GCFHEARRLFDDIPYARRNAFTWNSLLSMYAKSGRLADARVVFAQMPERDA-----VSWT 132
Query: 64 AVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRN 123
++ G + G +A+ M EGL P+ L++VL +CA + +G++ H ++ +
Sbjct: 133 VMVVGLNRAGRFWDAVKTFLDMVGEGLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKL 192
Query: 124 GFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELF 183
G S V N ++ +Y +CGD +A +F + +++E S N ++ Y G + A +F
Sbjct: 193 GLSSCVPVANSVLYMYGKCGDAETARAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMF 252
Query: 184 DQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACAD 243
+ ME +R I+SWN++I+GY N L D A F +L +EP FT SVL ACA+
Sbjct: 253 ENME----ERSIVSWNAIIAGYNQNGLDDMALKFFSRMLTASSMEPDEFTVTSVLSACAN 308
Query: 244 MNSLRKGKEIHALAIALGLQSDTFVGGALV------------------------------ 273
+ L+ GK++H+ + G+ + + AL+
Sbjct: 309 LRMLKMGKQMHSYILRTGMPYSSQIMNALISTYAKSGSVETARRIMDKAVVADLNVISFT 368
Query: 274 ---EMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTP 330
E Y + D A+ FD + N + + G+E N AM+LF M+ P
Sbjct: 369 ALLEGYVKLGDTKQAREVFDVMNNRDVIAWTAMIVGYEQNGQNDEAMELFRSMIRSGPEP 428
Query: 331 DIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAY 390
+ +T+ +LSAC+SLA + GKQ+H AIR + V + A++ +YA+ GS+ AR +
Sbjct: 429 NSHTLAAVLSACASLAYLGYGKQIHCRAIRSLQEQSVSVSNAIITVYARSGSVPLARRVF 488
Query: 391 KRIS-TPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSI 449
+I + V+ +M+ A A HG G++ I F +L G +PD ++++ SAC HAG I
Sbjct: 489 DQICWRKETVTWTSMIVALAQHGLGEQAIVLFEEMLRVGVKPDRVTYIGVFSACTHAGFI 548
Query: 450 KTGSEFFD-LMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLG 508
G +++ ++ + + P + HY CMVDLL+RAG L EA+EFI+++P+APD+V+WG+LL
Sbjct: 549 DKGKRYYEQMLNEHGIVPEMSHYACMVDLLARAGLLTEAHEFIQRMPVAPDTVVWGSLLA 608
Query: 509 GCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKS 568
C N + ++AA++L+ ++P+N+G Y LAN+++ GRW+D AR + KD+ + K
Sbjct: 609 ACRVRKNADLAELAAEKLLSIDPDNSGAYSALANVYSACGRWNDAARIWKLRKDKAVKKE 668
Query: 569 PGCSWIEDRDEIHKFRASDRSHDRSEEI 596
G SW + ++H F A D H + + I
Sbjct: 669 TGFSWTHVQSKVHVFGADDVLHPQRDAI 696
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 139/418 (33%), Positives = 219/418 (52%), Gaps = 26/418 (6%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKCG + A+ VF+ M R SWN++V+ G + AL E M E ++V
Sbjct: 207 MYGKCGDAETARAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENM-----EERSIV 261
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRM-QAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
SW+A+I G+ QNG D+ A+ RM A +EP+ T++SVL ACA L+ L +GK+ H Y
Sbjct: 262 SWNAIIAGYNQNGLDDMALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSY 321
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIK--NEVSCNTIIVGYCENGNVA 177
I R G + ++N L+ Y + G + +A +I K + N +S ++ GY + G+
Sbjct: 322 ILRTGMPYSSQIMNALISTYAKSGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTK 381
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
+ARE+FD M + R +I+W +MI GY N DEA +FR ++ R G EP S T +V
Sbjct: 382 QAREVFDVMNN----RDVIAWTAMIVGYEQNGQNDEAMELFRSMI-RSGPEPNSHTLAAV 436
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI----E 293
L ACA + L GK+IH AI + V A++ +Y R + A+ FD+I E
Sbjct: 437 LSACASLAYLGYGKQIHCRAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKE 496
Query: 294 NI--ENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG 351
+ +++ + + G A+ LF EML + + PD T + SAC+ +++G
Sbjct: 497 TVTWTSMIVALAQHGLGE-----QAIVLFEEMLRVGVKPDRVTYIGVFSACTHAGFIDKG 551
Query: 352 KQVHAYAI-RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST-PDLVSQNAMLTA 407
K+ + + G ++ +VD+ A+ G L A +R+ PD V ++L A
Sbjct: 552 KRYYEQMLNEHGIVPEMSHYACMVDLLARAGLLTEAHEFIQRMPVAPDTVVWGSLLAA 609
>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 199/577 (34%), Positives = 319/577 (55%), Gaps = 46/577 (7%)
Query: 28 SVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQA 87
S+V + G V +AL+ ++ P++V+WSA+I G Q G+ +EA + M+
Sbjct: 91 SLVDMYSKCGTVYDALKVFTKI-----RNPDVVAWSAMITGLDQQGHGQEAAELFHLMRR 145
Query: 88 EGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVY--RRCGDM 145
+G PN TLSS++ + L G+ HG I + GF S+ V N L+ +Y RC
Sbjct: 146 KGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYGFESDNLVSNPLIMMYMKSRC--- 202
Query: 146 LSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGY 205
E+GN ++F+ M ++SWN+++SG+
Sbjct: 203 -------------------------VEDGN-----KVFEAM----TNPDLVSWNALLSGF 228
Query: 206 VDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSD 265
D+ +F +L+ +G +P FTF SVL +C+ + GK++HA I D
Sbjct: 229 YDSQTCGRGPRIFYQMLL-EGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDD 287
Query: 266 TFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLS 325
FVG ALV+MY + + L A +AFD + N + + G+ A++ F +M
Sbjct: 288 DFVGTALVDMYAKARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQR 347
Query: 326 LDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKH 385
+ P+ YT+ LS CS +AT+E G+Q+HA A++ G+ D+ +G+ALVD+Y KCG ++H
Sbjct: 348 EGIKPNEYTLASCLSGCSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEH 407
Query: 386 ARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVH 445
A +K + + D+VS N +++ Y+ HG G++ + FR +L+ G PD +F+ LSAC
Sbjct: 408 AEAIFKGLISRDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSF 467
Query: 446 AGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWG 504
G ++ G + FD M+ Y + PS++HY CMVD+L RAG+ E FI+++ + P S++W
Sbjct: 468 MGLVEEGKKRFDSMSKIYGINPSIEHYACMVDILGRAGKFNEVKIFIEEMNLTPYSLIWE 527
Query: 505 ALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRR 564
+LG C HGN++FG+ AA +L E+EP +Y++L+N+FA GRW D+ R M R
Sbjct: 528 TVLGACKLHGNVDFGEKAAKKLFEMEPMMDSSYILLSNIFASKGRWDDVRNIRALMTSRG 587
Query: 565 MHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
+ K PGCSW+E ++H F + D SH + EIY +D
Sbjct: 588 IKKEPGCSWVEVDGQVHVFLSQDGSHPKIREIYAKLD 624
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 132/474 (27%), Positives = 217/474 (45%), Gaps = 65/474 (13%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
N VSW+A++ G+ Q G ++ + + +M+ + + TLS+VL CA L GK H
Sbjct: 15 NGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCANTGSLREGKVLH 74
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
R+G + F+ LVD+Y +CG + ALK+F+K + V+ + +I G + G+
Sbjct: 75 ALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSAMITGLDQQGHGQ 134
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
EA ELF L+ R G P FT S+
Sbjct: 135 EAAELF------------------------------------HLMRRKGARPNQFTLSSL 158
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
+ +M LR G+ IH G +SD V L+ MY + + + F+ + N
Sbjct: 159 VSTATNMGDLRYGQSIHGCICKYGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTN--- 215
Query: 298 LLGKMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACS 343
P++ +WNA+ ++F +ML P+++T +L +CS
Sbjct: 216 -----------PDLVSWNALLSGFYDSQTCGRGPRIFYQMLLEGFKPNMFTFISVLRSCS 264
Query: 344 SLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNA 403
SL E GKQVHA+ I+ D D +GTALVDMYAK L+ A +A+ R+ D+ S
Sbjct: 265 SLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKARCLEDAGVAFDRLVNRDIFSWTV 324
Query: 404 MLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYD 463
+++ YA ++ + +FR++ G +P+ + S LS C H +++ G + +
Sbjct: 325 IISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLSGCSHMATLENGRQLHAVAVKAG 384
Query: 464 VKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
+ + +VDL + G + A E I K ++ D V W ++ G HG E
Sbjct: 385 HFGDIFVGSALVDLYGKCGCMEHA-EAIFKGLISRDIVSWNTIISGYSQHGQGE 437
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 68/157 (43%), Gaps = 42/157 (26%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+YGKCG ++ A+ +FK + RD VSWN++++
Sbjct: 398 LYGKCGCMEHAEAIFKGLISRDIVSWNTIIS----------------------------- 428
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
G++Q+G E+A+ M +EG+ P+ T VL AC+ + + GK+
Sbjct: 429 -------GYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEEGKK----- 476
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSI 157
R MS + +N ++ Y D+L F++ I
Sbjct: 477 -RFDSMSKIYGINPSIEHYACMVDILGRAGKFNEVKI 512
>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
Length = 785
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 201/578 (34%), Positives = 306/578 (52%), Gaps = 41/578 (7%)
Query: 20 ERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAI 79
E D ++V A G+++EA MS D +V+W+A+I G + G ++A+
Sbjct: 141 ESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRD-----VVAWNAMIAGCSLYGLCDDAV 195
Query: 80 GMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVY 139
++ +MQ EG+ PN+ T+ VLP + L GK HGY R F + V GL+D+Y
Sbjct: 196 QLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMY 255
Query: 140 RRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWN 199
+C +L A KIF ++NEV SW+
Sbjct: 256 AKCQCLLYARKIFDVMGVRNEV-----------------------------------SWS 280
Query: 200 SMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIA 259
+MI GYV + EA +F ++++D ++PT T GSVL ACA + L +G+++H I
Sbjct: 281 AMIGGYVXSDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIK 340
Query: 260 LGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQL 319
LG D +G L+ MY + + A FD + +++ G N A+ +
Sbjct: 341 LGXVLDILLGNTLLSMYAKCGVIDDAIRFFDXMNPKDSVSFSAIVSGCVQNGNAAVALSI 400
Query: 320 FSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAK 379
F M + PD+ T+ +L ACS LA ++ G H Y I G+ +D I AL+DMY+K
Sbjct: 401 FRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSK 460
Query: 380 CGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSA 439
CG + AR + R+ D+VS NAM+ Y +HG G E + F +LA G +PD I+F+
Sbjct: 461 CGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICL 520
Query: 440 LSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAP 498
LS+C H+G + G +FD M+ + + P ++H CMVD+L RAG + EA+ FI+ +P P
Sbjct: 521 LSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEP 580
Query: 499 DSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQ 558
D +W ALL C H N+E G+ + ++ L P +TGN+V+L+N+++ AGRW D A R
Sbjct: 581 DVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRI 640
Query: 559 KMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEI 596
KD + K PGCSWIE +H F D+SH + +I
Sbjct: 641 TQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQI 678
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 126/463 (27%), Positives = 211/463 (45%), Gaps = 44/463 (9%)
Query: 56 TPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKE 115
P+++ W+ +I + NG + AI + M G+ PN T VL AC+ L + G E
Sbjct: 71 NPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVE 130
Query: 116 FHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGN 175
H + G S+ FV LVD Y +CG ++ A ++FS S ++ V+ N +I G G
Sbjct: 131 IHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGL 190
Query: 176 VAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFG 235
+A +L QM+ +GI P S T
Sbjct: 191 CDDAVQLIMQMQ------------------------------------EEGICPNSSTIV 214
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
VL + +L GK +H + + VG L++MY + Q L+ A+ FD +
Sbjct: 215 GVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVR 274
Query: 296 ENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLD-LTPDIYTVGIILSACSSLATMERGKQV 354
+ G+ + A++LF +M+ D + P T+G +L AC+ L + RG+++
Sbjct: 275 NEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKL 334
Query: 355 HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHG 414
H Y I+ G D+ +G L+ MYAKCG + A + ++ D VS +A+++ +G+
Sbjct: 335 HCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRFFDXMNPKDSVSFSAIVSGCVQNGNA 394
Query: 415 KEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKP-SLKHYTC 473
++ FR + SG PD + L L AC H +++ G F Y V+ + C
Sbjct: 395 AVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHG---FCSHGYLIVRGFATDTLIC 451
Query: 474 --MVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
++D+ S+ G++ A E ++ D V W A++ G HG
Sbjct: 452 NALIDMYSKCGKISFAREVFNRMD-RHDIVSWNAMIIGYGIHG 493
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 112/418 (26%), Positives = 190/418 (45%), Gaps = 40/418 (9%)
Query: 100 VLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKN 159
+L AC + + L+ K+ H + +N ++ V++ L +Y
Sbjct: 14 LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLY-------------------- 53
Query: 160 EVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFR 219
+SCN +++ AR LFD++ + V I WN +I Y N +D A ++
Sbjct: 54 -LSCNQVVL----------ARRLFDEIPNPSV----ILWNQIIRAYAWNGPFDGAIDLYH 98
Query: 220 DLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRY 279
+L G+ P +T+ VL AC+ + ++ G EIH+ A GL+SD FV ALV+ Y +
Sbjct: 99 SML-HLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKC 157
Query: 280 QDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIIL 339
LV AQ F + + + + G +A+QL +M + P+ T+ +L
Sbjct: 158 GILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVL 217
Query: 340 SACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLV 399
+ GK +H Y +R +D+ V +GT L+DMYAKC L +AR + + + V
Sbjct: 218 PTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEV 277
Query: 400 SQNAMLTAYAMHGHGKEGIAHF-RRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDL 458
S +AM+ Y KE + F + IL P ++ S L AC + G +
Sbjct: 278 SWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCY 337
Query: 459 MAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAP-DSVMWGALLGGCVSHGN 515
+ + ++ + ++ G + +A F M P DSV + A++ GCV +GN
Sbjct: 338 IIKLGXVLDILLGNTLLSMYAKCGVIDDAIRFFDX--MNPKDSVSFSAIVSGCVQNGN 393
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 103/413 (24%), Positives = 177/413 (42%), Gaps = 73/413 (17%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC L A+K+F +M R+ VSW++++ + + EALE ++M
Sbjct: 254 MYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQM----------- 302
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+ + ++P TL SVL ACA+L LS G++ H YI
Sbjct: 303 ------------------------ILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYI 338
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G + + + N L+ +Y +CG + A++ F + K+ VS + I+ G +NGN A A
Sbjct: 339 IKLGXVLDILLGNTLLSMYAKCGVIDDAIRFFDXMNPKDSVSFSAIVSGCVQNGNAAVAL 398
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+F M+ GI+P T VL A
Sbjct: 399 SIFRMMQ------------------------------------LSGIDPDLTTMLGVLPA 422
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C+ + +L+ G H I G +DT + AL++MY + + A+ F+ ++ + +
Sbjct: 423 CSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSW 482
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACS-SLATMERGKQVHAYAI 359
G+ + A+ LF ++L+L L PD T +LS+CS S ME A +
Sbjct: 483 NAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSR 542
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNAMLTAYAMH 411
+ +VD+ + G + A + + PD+ +A+L+A +H
Sbjct: 543 DFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIH 595
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 150/327 (45%), Gaps = 12/327 (3%)
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
+L AC SL + K+IH + +D+ V L +Y +V A+ FDEI N
Sbjct: 14 LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73
Query: 297 NLLGKMKEDGFEPNVYTWN-----AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG 351
+L Y WN A+ L+ ML L + P+ YT +L ACS L +E G
Sbjct: 74 VILWNQI-----IRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDG 128
Query: 352 KQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMH 411
++H++A G +SDV + TALVD YAKCG L A+ + +S D+V+ NAM+ +++
Sbjct: 129 VEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLY 188
Query: 412 GHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHY 471
G + + ++ G P+ + + L A ++ G +
Sbjct: 189 GLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVG 248
Query: 472 TCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEP 531
T ++D+ ++ L A + I + + V W A++GG V ++ D++I L+
Sbjct: 249 TGLLDMYAKCQCLLYARK-IFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMI-LKD 306
Query: 532 NNTGNYVMLANLFAYAGRWSDLARTRQ 558
V L ++ + +DL+R R+
Sbjct: 307 AMDPTPVTLGSVLRACAKLTDLSRGRK 333
>gi|413932901|gb|AFW67452.1| hypothetical protein ZEAMMB73_642603 [Zea mays]
Length = 853
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 208/599 (34%), Positives = 316/599 (52%), Gaps = 73/599 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC LDDA ++F++MP+ D LV
Sbjct: 286 MYAKCQCLDDAWRLFELMPQDD------------------------------------LV 309
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+ +I G QNG EA G+ + MQ G P++ TL S+LPA L L GKE HGYI
Sbjct: 310 TWNGMISGCVQNGLFVEAFGLFYDMQRSGARPDSITLVSLLPALTDLNGLKQGKEVHGYI 369
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
RN + F+V+ LVD+Y +C D V A+
Sbjct: 370 VRNCVNMDVFLVSALVDIYFKCRD-------------------------------VRMAQ 398
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
L+D + V G ++MISGYV N + +EA MFR LL I+P + T SVL
Sbjct: 399 NLYDAARAIDVVIG----STMISGYVLNGMSEEALQMFRYLL-EQCIKPNAVTIASVLPG 453
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA M +L G++IH + + +V AL++MY + L + F ++ + +
Sbjct: 454 CASMAALPLGQQIHGYVLRNAYERKCYVESALMDMYAKCGRLDLSHYIFLKMSQKDEVTW 513
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
F N A+ LF +M + + T+ LSAC+SL + GK++H I+
Sbjct: 514 NSMISSFSQNGKPQEALDLFRQMCMEGIKYNNITISAALSACASLPAIYYGKEIHGVTIK 573
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
+D+ +AL+DMYAKCG+L+ A ++ + + VS N++++AY HG KE ++
Sbjct: 574 GPIKADIFAESALIDMYAKCGNLELALRVFEFMPDKNEVSWNSIISAYGAHGLVKESVSL 633
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLS 479
+ G++PDH++FL+ +SAC HAG ++ G + F M Y + P ++H+ CMVDL S
Sbjct: 634 LHGMQEEGYKPDHVTFLALISACAHAGLVEEGVQLFQCMTKKYLIAPRMEHFACMVDLYS 693
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
R+G+L +A +FI +P PD+ +WGALL C H N+E IA+ L +L+P N+G YV+
Sbjct: 694 RSGKLDKAIQFIADMPFKPDAGIWGALLHACRVHRNVELADIASQELFKLDPANSGYYVL 753
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYT 598
++N+ A AGRW +++ R+ MKD ++ K PG SW++ + H F ASD+SH SE+IYT
Sbjct: 754 MSNINAVAGRWDGVSKVRRLMKDNKILKIPGYSWVDVNNSSHLFVASDKSHPESEDIYT 812
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 140/514 (27%), Positives = 239/514 (46%), Gaps = 73/514 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY G L +A+ F +PERDCV WN ++ C G V
Sbjct: 185 MYADAGLLGNARDAFDGIPERDCVLWNVMMDGCIKAGDV--------------------- 223
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+ A+ + M+A G EPN TL+ L CA L G + H
Sbjct: 224 ---------------DGAVRLFRNMRASGCEPNFATLACFLSVCATDADLLSGAQLHSLA 268
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G V N L+ +Y +C + A ++F
Sbjct: 269 VKCGLEPEVAVANTLLAMYAKCQCLDDAWRLF---------------------------- 300
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
L Q +++WN MISG V N L+ EAF +F D+ R G P S T S+L A
Sbjct: 301 -------ELMPQDDLVTWNGMISGCVQNGLFVEAFGLFYDM-QRSGARPDSITLVSLLPA 352
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
D+N L++GKE+H + + D F+ ALV++Y + +D+ AQ +D I+ ++G
Sbjct: 353 LTDLNGLKQGKEVHGYIVRNCVNMDVFLVSALVDIYFKCRDVRMAQNLYDAARAIDVVIG 412
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G+ N + A+Q+F +L + P+ T+ +L C+S+A + G+Q+H Y +R
Sbjct: 413 STMISGYVLNGMSEEALQMFRYLLEQCIKPNAVTIASVLPGCASMAALPLGQQIHGYVLR 472
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
Y+ ++ +AL+DMYAKCG L + + ++S D V+ N+M+++++ +G +E +
Sbjct: 473 NAYERKCYVESALMDMYAKCGRLDLSHYIFLKMSQKDEVTWNSMISSFSQNGKPQEALDL 532
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSR 480
FR++ G + ++I+ +ALSAC +I G E + +K + + ++D+ ++
Sbjct: 533 FRQMCMEGIKYNNITISAALSACASLPAIYYGKEIHGVTIKGPIKADIFAESALIDMYAK 592
Query: 481 AGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
G L A + +P + V W +++ +HG
Sbjct: 593 CGNLELALRVFEFMP-DKNEVSWNSIISAYGAHG 625
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/368 (26%), Positives = 160/368 (43%), Gaps = 40/368 (10%)
Query: 93 NARTLSSVLPACARLQKLSLGKEFHGYITRNGFMS--NPFVVN----GLVDVYRRCGDML 146
+A L +VL C L LG + H +G +S N ++ G+ + RR D +
Sbjct: 31 SADRLLAVLRGCVSAPHLPLGLQIHARAVVSGALSDHNHLALHTRLLGMYVLARRFRDAV 90
Query: 147 SALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYV 206
+ + + + + N +I G+ G HL V + W+ +
Sbjct: 91 AVFSALPRAAAASSLPWNWLIRGFTAAGQ-----------HHLAVLFYVKMWSHPAAP-- 137
Query: 207 DNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDT 266
P + T V+ +CA + ++ G+ +H A A+GL +D
Sbjct: 138 ---------------------SPDAHTLPYVVKSCAALGAMSLGRLVHRTARAIGLANDV 176
Query: 267 FVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSL 326
+VG ALV+MY L A+ AFD I + +L + DG A++LF M +
Sbjct: 177 YVGSALVKMYADAGLLGNARDAFDGIPERDCVLWNVMMDGCIKAGDVDGAVRLFRNMRAS 236
Query: 327 DLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHA 386
P+ T+ LS C++ A + G Q+H+ A++CG + +V + L+ MYAKC L A
Sbjct: 237 GCEPNFATLACFLSVCATDADLLSGAQLHSLAVKCGLEPEVAVANTLLAMYAKCQCLDDA 296
Query: 387 RLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHA 446
++ + DLV+ N M++ +G E F + SG RPD I+ +S L A
Sbjct: 297 WRLFELMPQDDLVTWNGMISGCVQNGLFVEAFGLFYDMQRSGARPDSITLVSLLPALTDL 356
Query: 447 GSIKTGSE 454
+K G E
Sbjct: 357 NGLKQGKE 364
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 129/287 (44%), Gaps = 9/287 (3%)
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSD---TFVGGALVEMYC---RYQDLVAAQMAF 289
+VL C L G +IHA A+ G SD + L+ MY R++D VA A
Sbjct: 37 AVLRGCVSAPHLPLGLQIHARAVVSGALSDHNHLALHTRLLGMYVLARRFRDAVAVFSAL 96
Query: 290 DEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDL--TPDIYTVGIILSACSSLAT 347
+L GF A+ + +M S +PD +T+ ++ +C++L
Sbjct: 97 PRAAAASSLPWNWLIRGFTAAGQHHLAVLFYVKMWSHPAAPSPDAHTLPYVVKSCAALGA 156
Query: 348 MERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTA 407
M G+ VH A G +DV++G+ALV MYA G L +AR A+ I D V N M+
Sbjct: 157 MSLGRLVHRTARAIGLANDVYVGSALVKMYADAGLLGNARDAFDGIPERDCVLWNVMMDG 216
Query: 408 YAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPS 467
G + FR + ASG P+ + LS C + +G++ L ++P
Sbjct: 217 CIKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCATDADLLSGAQLHSLAVKCGLEPE 276
Query: 468 LKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
+ ++ + ++ L +A+ + +P D V W ++ GCV +G
Sbjct: 277 VAVANTLLAMYAKCQCLDDAWRLFELMPQ-DDLVTWNGMISGCVQNG 322
>gi|297596302|ref|NP_001042337.2| Os01g0205200 [Oryza sativa Japonica Group]
gi|56201494|dbj|BAD72991.1| pentatricopeptide repeat protein -like [Oryza sativa Japonica
Group]
gi|255672984|dbj|BAF04251.2| Os01g0205200 [Oryza sativa Japonica Group]
Length = 658
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 206/581 (35%), Positives = 312/581 (53%), Gaps = 43/581 (7%)
Query: 22 DCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGM 81
C N++++ A + + +AL + M D ++SW+++IGG NG ++A+ +
Sbjct: 18 QCAVCNALISFYAKSNRIEDALMVFDEMPQRD-----IISWNSIIGGCASNGLYDKAVEL 72
Query: 82 LFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRR 141
RM EG E ++ TL SV+PAC + +G HGY R G +S + N L+D+Y
Sbjct: 73 FVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSLGNALLDMYSN 132
Query: 142 CGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSM 201
C D S KIF KN ++SW +M
Sbjct: 133 CSDWRSTNKIFRNMEQKN-----------------------------------VVSWTAM 157
Query: 202 ISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALG 261
I+ Y +D+ +F+++ + +GI P F S L A A SL+ GK +H AI G
Sbjct: 158 ITSYTRAGHFDKVAGLFQEMGL-EGIRPDVFAITSALDAFAGNESLKHGKSVHGYAIRNG 216
Query: 262 LQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFS 321
++ V AL+EMY + + A+ FD + + + G+ + A LF+
Sbjct: 217 IEEVLPVANALMEMYVKCGYMEEARFIFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFN 276
Query: 322 EMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCG 381
EML L L P+ T+ IL A +SL+++ERG+++HAYA+R GY D + ALVDMY KCG
Sbjct: 277 EML-LQLRPNAVTMACILPAAASLSSLERGREMHAYAVRRGYLEDNFVANALVDMYVKCG 335
Query: 382 SLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALS 441
+L AR + ++ +L+S M+ Y MHG G++ IA F ++ SG +PD SF + L
Sbjct: 336 ALLLARRLFDMLTNKNLISWTIMIAGYGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILY 395
Query: 442 ACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDS 500
AC H+G G FF+ M + ++P LKHY CMVDLL G L EAYEFI+ +P+ PDS
Sbjct: 396 ACSHSGLRDEGWRFFNAMRNEHRIEPKLKHYACMVDLLCHTGNLKEAYEFIETMPIEPDS 455
Query: 501 VMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKM 560
+W +LL GC H N++ + A+ + ELEP NTG YV+LAN++A A RW + + + K+
Sbjct: 456 SIWVSLLRGCRIHRNVKLAEKVAEMVFELEPENTGYYVLLANIYAEAERWEAVRKLKNKV 515
Query: 561 KDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
R + ++ GCSWIE R + H F A +R+H + I +D
Sbjct: 516 GGRGLRENTGCSWIEVRGKAHIFFAENRNHPQGMRIAEFLD 556
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 100/388 (25%), Positives = 169/388 (43%), Gaps = 76/388 (19%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY C K+F+ M +++ VSW +++T+
Sbjct: 129 MYSNCSDWRSTNKIFRNMEQKNVVSWTAMITS---------------------------- 160
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+T+ G+ ++ G+ M EG+ P+ ++S L A A + L GK HGY
Sbjct: 161 --------YTRAGHFDKVAGLFQEMGLEGIRPDVFAITSALDAFAGNESLKHGKSVHGYA 212
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
RNG V N L+++Y +CG M A IF + K+ +S NT+I GY +
Sbjct: 213 IRNGIEEVLPVANALMEMYVKCGYMEEARFIFDHVTKKDTISWNTLIGGYSRS------- 265
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+L +EAF++F ++L++ + P + T +L A
Sbjct: 266 ----------------------------NLANEAFTLFNEMLLQ--LRPNAVTMACILPA 295
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
A ++SL +G+E+HA A+ G D FV ALV+MY + L+ A+ FD + N +
Sbjct: 296 AASLSSLERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISW 355
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
+ G+ + +A+ LF +M + PD + IL ACS + G + A+R
Sbjct: 356 TIMIAGYGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEGWRFFN-AMR 414
Query: 361 CGYDSDVHIG--TALVDMYAKCGSLKHA 386
+ + + +VD+ G+LK A
Sbjct: 415 NEHRIEPKLKHYACMVDLLCHTGNLKEA 442
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 133/311 (42%), Gaps = 8/311 (2%)
Query: 250 GKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEP 309
G +H + G + V AL+ Y + + A M FDE+ + + G
Sbjct: 3 GLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCAS 62
Query: 310 NVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHI 369
N A++LF M D T+ ++ AC G VH Y++R G S+ +
Sbjct: 63 NGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSL 122
Query: 370 GTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGF 429
G AL+DMY+ C + ++ + ++VS AM+T+Y GH + F+ + G
Sbjct: 123 GNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEGI 182
Query: 430 RPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYE 489
RPD + SAL A S+K G ++ L ++++ + G + EA
Sbjct: 183 RPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEA-R 241
Query: 490 FIKKIPMAPDSVMWGALLGGCVSHGNL--EFGQIAADRLIELEPNNTGNYVMLANLFAYA 547
FI D++ W L+GG S NL E + + L++L PN V +A + A
Sbjct: 242 FIFDHVTKKDTISWNTLIGG-YSRSNLANEAFTLFNEMLLQLRPNA----VTMACILPAA 296
Query: 548 GRWSDLARTRQ 558
S L R R+
Sbjct: 297 ASLSSLERGRE 307
>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 368 bits (945), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 194/548 (35%), Positives = 311/548 (56%), Gaps = 6/548 (1%)
Query: 55 ETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGK 114
E PNL W+++I G + + A+ RM G+EPN+ T +L +CA+L GK
Sbjct: 90 EEPNLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGK 149
Query: 115 EFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
+ H ++ + GF+S+ F+ L+++Y + G+M +A +F + + ++ +S +I GY G
Sbjct: 150 QIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWG 209
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTF 234
+ AR+LFD+M + ++SWN+MI+GY EA +F D+ + + P T
Sbjct: 210 YMDRARQLFDEMP----VKDVVSWNAMIAGYAQMGRSKEALLLFEDM-RKANVPPNESTI 264
Query: 235 GSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIEN 294
SVL ACA N+L G + + GL S+ + AL++MY + DL A+ FD++
Sbjct: 265 VSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLE 324
Query: 295 IENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV 354
+ + + G+ A+ LF EML+ + P T IL +C+ L ++ GK +
Sbjct: 325 RDVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWI 384
Query: 355 HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHG 414
HAY + + T+L+D+YAKCG++ AR + + L S NAM+ AMHG
Sbjct: 385 HAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQA 444
Query: 415 KEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTC 473
+ F ++ + G P+ I+F+ LSAC HAG + G +FF M Y + P +HY C
Sbjct: 445 DKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQHYGC 504
Query: 474 MVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNN 533
M+DLL RAG EA ++ + + PD +WG+LLG C HG +E G++ A+RL ELEP+N
Sbjct: 505 MIDLLGRAGLFEEAESLLQNMEVKPDGAIWGSLLGACRDHGRVELGELVAERLFELEPDN 564
Query: 534 TGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRS 593
G YV+L+N++A AG+W D+AR R ++ DR M K PGC+ IE + +H+F D+ H +S
Sbjct: 565 PGAYVLLSNIYAGAGKWDDVARIRTRLNDRGMKKVPGCTTIEVDNVVHEFLVGDKVHPQS 624
Query: 594 EEIYTIID 601
E+IY +++
Sbjct: 625 EDIYRMLE 632
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 120/439 (27%), Positives = 198/439 (45%), Gaps = 83/439 (18%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETP--N 58
MY + G +++A+ VF RD +S+ +++ A G ++R L +E P +
Sbjct: 173 MYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGY-------MDRARQLFDEMPVKD 225
Query: 59 LVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHG 118
+VSW+A+I G+ Q G +EA+ + M+ + PN T+ SVL ACA+ L LG
Sbjct: 226 VVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQSNALDLGNSMRS 285
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
+I G SN +VN L+D+Y +CGD+ +A ++F ++ +S N +I GY + E
Sbjct: 286 WIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISWNVMIGGYTHMCSYKE 345
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
A LF +M + G+EPT TF S+L
Sbjct: 346 ALALFREM------------------------------------LASGVEPTEITFLSIL 369
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
+CA + ++ GK IHA T + +L+++Y + ++VAA+ FD +
Sbjct: 370 PSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGM------ 423
Query: 299 LGKMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSS 344
K+K ++ +WNAM +LFS+M S + P+ T ILSAC
Sbjct: 424 --KIK------SLASWNAMICGLAMHGQADKAFELFSKMSSDGIEPNEITFVGILSACKH 475
Query: 345 LATMERGKQ-----VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST-PDL 398
++ G+Q V Y I H G ++D+ + G + A + + PD
Sbjct: 476 AGLVDLGQQFFSSMVQDYKIS---PKSQHYG-CMIDLLGRAGLFEEAESLLQNMEVKPDG 531
Query: 399 VSQNAMLTAYAMHGHGKEG 417
++L A HG + G
Sbjct: 532 AIWGSLLGACRDHGRVELG 550
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 138/312 (44%), Gaps = 62/312 (19%)
Query: 245 NSLRKGKEIHALAIALGLQSDTFVGGALVEM--YCRYQDLVAAQMAFDEIENIENLLGKM 302
S+R K+IHA I GL + F L+E R D+ A F+ IE
Sbjct: 40 QSIRTFKQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIE--------- 90
Query: 303 KEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSSLATM 348
EPN++ WN+M F M+ + P+ YT +L +C+ LA+
Sbjct: 91 -----EPNLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASA 145
Query: 349 ERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKR---------------- 392
GKQ+HA+ ++ G+ SDV I T+L++MYA+ G + +A+L + +
Sbjct: 146 HEGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGY 205
Query: 393 ---------------ISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFL 437
+ D+VS NAM+ YA G KE + F + + P+ + +
Sbjct: 206 ALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIV 265
Query: 438 SALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMA 497
S LSAC + ++ G+ + + +LK ++D+ S+ G+L A E + +
Sbjct: 266 SVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDM-LE 324
Query: 498 PDSVMWGALLGG 509
D + W ++GG
Sbjct: 325 RDVISWNVMIGG 336
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 81/174 (46%), Gaps = 6/174 (3%)
Query: 338 ILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYA--KCGSLKHARLAYKRIST 395
+LS C S+ T KQ+HA+ I+ G + + + L++ A + G + +A + I
Sbjct: 35 LLSKCQSIRTF---KQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIEE 91
Query: 396 PDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEF 455
P+L N+M+ +M + F R++ SG P+ +F L +C S G +
Sbjct: 92 PNLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQI 151
Query: 456 FDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
+ + +T ++++ +++GE+ A + + D++ + AL+ G
Sbjct: 152 HAHVLKLGFVSDVFIHTSLINMYAQSGEMNNA-QLVFDQSNFRDAISFTALIAG 204
>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
Length = 886
Score = 368 bits (944), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 202/556 (36%), Positives = 306/556 (55%), Gaps = 49/556 (8%)
Query: 55 ETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGK 114
E +LV+W+ V+ QN EA+ L M EG+EP+ T+SSVLPAC+ L+ L GK
Sbjct: 259 EGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLEMLRTGK 318
Query: 115 EFHGYITRNGFM-SNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCEN 173
E H Y +NG + N FV + LVD+Y C +LS ++F
Sbjct: 319 ELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCRVFDG------------------- 359
Query: 174 GNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFT 233
+FD R I WN+MI+GY N +EA +F ++ G+ S T
Sbjct: 360 --------MFD--------RKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTT 403
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
V+ AC + K + IH + GL D FV AL++MY R + A+ F ++E
Sbjct: 404 MAGVVPACVRSGAFSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKME 463
Query: 294 NIE------NLLGKMKEDGFEPNVYTWNAMQLFSEMLS-----LDLTPDIYTVGIILSAC 342
+ + + G + + E + + MQ+ S + L P+ T+ IL +C
Sbjct: 464 DRDLVTWNTIITGYVFSERHEDALLMLHKMQILERKASERASRVSLKPNSITLMTILPSC 523
Query: 343 SSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQN 402
++L+ + +GK++HAYAI+ +DV +G+ALVDMYAKCG L+ +R + +I ++++ N
Sbjct: 524 AALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPIRNVITWN 583
Query: 403 AMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSE-FFDLMAY 461
++ AY MHG+ ++ I R ++ G +P+ ++F+S +AC H+G + G + F+++
Sbjct: 584 VIVMAYGMHGNSQDAIDMLRMMMVQGVKPNEVTFISVFAACSHSGMVNEGLKIFYNMKKD 643
Query: 462 YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSV-MWGALLGGCVSHGNLEFGQ 520
Y V+PS HY C+VDLL RAG + EAY+ I IP D W +LLG C H NLE G+
Sbjct: 644 YGVEPSSDHYACVVDLLGRAGRVKEAYQLINLIPRNFDKAGAWSSLLGACRIHNNLEIGE 703
Query: 521 IAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEI 580
IAA LI+LEPN +YV+LAN+++ AG W R+ MK + + K PGCSWIE DE+
Sbjct: 704 IAAQNLIQLEPNVASHYVLLANIYSSAGLWYKATEVRRNMKAQGVRKEPGCSWIEHGDEV 763
Query: 581 HKFRASDRSHDRSEEI 596
HKF A D SH +SE++
Sbjct: 764 HKFVAGDSSHPQSEKL 779
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 123/474 (25%), Positives = 218/474 (45%), Gaps = 54/474 (11%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARL---QKLSLGK 114
N VSW+++I E A+ M E +EP++ TL SV AC+ + L +GK
Sbjct: 159 NQVSWNSLISSLCSFEKWEMALEAFRCMLDEDVEPSSFTLVSVALACSNFPMPEGLLMGK 218
Query: 115 EFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
+ H Y R G + N F++N LV +Y + G + S+ + F ++ V+ NT++ C+N
Sbjct: 219 QVHAYGLRKGEL-NSFIINTLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNE 277
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTF 234
EA E +M + +G+EP FT
Sbjct: 278 QFLEALEYLREM------------------------------------VLEGVEPDGFTI 301
Query: 235 GSVLIACADMNSLRKGKEIHALAIALG-LQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
SVL AC+ + LR GKE+HA A+ G L ++FVG ALV+MYC + +++ FD +
Sbjct: 302 SSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCRVFDGMF 361
Query: 294 NIENLLGKMKEDGFEPNVYTWNAMQLFSEM-LSLDLTPDIYTVGIILSACSSLATMERGK 352
+ + L G+ N Y A+ LF EM S L + T+ ++ AC + +
Sbjct: 362 DRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGAFSKKE 421
Query: 353 QVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHG 412
+H + ++ G D D + AL+DMY++ G + A+ + ++ DLV+ N ++T Y
Sbjct: 422 AIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLVTWNTIITGYVFSE 481
Query: 413 HGKEGI--AHFRRILAS---------GFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY 461
++ + H +IL +P+ I+ ++ L +C ++ G E
Sbjct: 482 RHEDALLMLHKMQILERKASERASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIK 541
Query: 462 YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
++ + + +VD+ ++ G L + + +IP+ + + W ++ HGN
Sbjct: 542 NNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPIR-NVITWNVIVMAYGMHGN 594
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 116/456 (25%), Positives = 205/456 (44%), Gaps = 44/456 (9%)
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W ++ ++ EA+ M G++P+ ++L A A LQ + LGK+ H ++
Sbjct: 61 WIDLLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVY 120
Query: 122 RNGF-MSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G+ + + V N LV++YR+CGD + K+F + S +N+VS
Sbjct: 121 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVS------------------ 162
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
WNS+IS ++ A FR +L D +EP+SFT SV +A
Sbjct: 163 -----------------WNSLISSLCSFEKWEMALEAFRCMLDED-VEPSSFTLVSVALA 204
Query: 241 CADM---NSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
C++ L GK++HA + G + ++F+ LV MY + L ++++ E +
Sbjct: 205 CSNFPMPEGLLMGKQVHAYGLRKG-ELNSFIINTLVAMYGKMGKLASSKVLLGSFEGRDL 263
Query: 298 LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAY 357
+ N A++ EM+ + PD +T+ +L ACS L + GK++HAY
Sbjct: 264 VTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLEMLRTGKELHAY 323
Query: 358 AIRCG-YDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKE 416
A++ G D + +G+ALVDMY C + + + + NAM+T YA + + +E
Sbjct: 324 ALKNGSLDENSFVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEE 383
Query: 417 GIAHFRRILAS-GFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMV 475
+ F + S G + + + ACV +G+ + + ++
Sbjct: 384 ALLLFIEMEESAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRGLDRDRFVQNALM 443
Query: 476 DLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCV 511
D+ SR G++ A K+ D V W ++ G V
Sbjct: 444 DMYSRLGKIDIAKRIFGKME-DRDLVTWNTIITGYV 478
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 120/238 (50%), Gaps = 25/238 (10%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY + G +D AK++F M +RD V+WN+++T + +AL L +M L+ +
Sbjct: 445 MYSRLGKIDIAKRIFGKMEDRDLVTWNTIITGYVFSERHEDALLMLHKMQILERKASE-- 502
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
R L+PN+ TL ++LP+CA L L+ GKE H Y
Sbjct: 503 -----------------------RASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYA 539
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+N ++ V + LVD+Y +CG + + K+F + I+N ++ N I++ Y +GN +A
Sbjct: 540 IKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPIRNVITWNVIVMAYGMHGNSQDAI 599
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
++ M GV+ +++ S+ + + + +E +F ++ G+EP+S + V+
Sbjct: 600 DMLRMMMVQGVKPNEVTFISVFAACSHSGMVNEGLKIFYNMKKDYGVEPSSDHYACVV 657
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 65/124 (52%), Gaps = 2/124 (1%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG L ++KVF +P R+ ++WN +V A +G +A++ L RM + PN V
Sbjct: 557 MYAKCGCLQMSRKVFDQIPIRNVITWNVIVMAYGMHGNSQDAIDML-RMMMVQGVKPNEV 615
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
++ +V + +G E + + + M+ + G+EP++ + V+ R ++ +
Sbjct: 616 TFISVFAACSHSGMVNEGLKIFYNMKKDYGVEPSSDHYACVVDLLGRAGRVKEAYQLINL 675
Query: 120 ITRN 123
I RN
Sbjct: 676 IPRN 679
>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 736
Score = 368 bits (944), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 192/561 (34%), Positives = 316/561 (56%), Gaps = 10/561 (1%)
Query: 46 LERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACA 105
L S+ ++ PN+ W+ +I + ++ + +M GL PN+ T S+ +CA
Sbjct: 79 LSLFHSIHHQPPNIFIWNTLIRAHSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCA 138
Query: 106 RLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNT 165
+ + K+ H + + +P V L+ +Y + G++ A +F K ++++ VS
Sbjct: 139 KSKATHEAKQLHAHALKLALHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTA 198
Query: 166 IIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRD 225
+I GY G+V +AR LFD++ + ++SWN+MI+GYV + ++EA + F + D
Sbjct: 199 LITGYVSEGHVDDARRLFDEIP----AKDVVSWNAMIAGYVQSGRFEEALACFTRMQEAD 254
Query: 226 GIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAA 285
+ P T SVL AC + SL GK I + G + + ALV+MY + ++ A
Sbjct: 255 -VSPNQSTMVSVLSACGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTA 313
Query: 286 QMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSL 345
+ FD +E+ + +L G+ A+ LF ML ++TP+ T +L AC+SL
Sbjct: 314 RKLFDGMEDKDVILWNTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASL 373
Query: 346 ATMERGKQVHAYAIR----CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQ 401
++ GK VHAY + G ++V + T+++ MYAKCG ++ A ++ + + L S
Sbjct: 374 GALDLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASW 433
Query: 402 NAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY 461
NAM++ AM+GH + + F ++ GF+PD I+F+ LSAC AG ++ G +F M
Sbjct: 434 NAMISGLAMNGHAERALGLFEEMINEGFQPDDITFVGVLSACTQAGFVELGHRYFSSMNK 493
Query: 462 -YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQ 520
Y + P L+HY CM+DLL+R+G+ EA + + M PD +WG+LL C HG +EFG+
Sbjct: 494 DYGISPKLQHYGCMIDLLARSGKFDEAKVLMGNMEMEPDGAIWGSLLNACRIHGQVEFGE 553
Query: 521 IAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEI 580
A+RL ELEP N+G YV+L+N++A AGRW D+A+ R K+ D+ M K PGC+ IE +
Sbjct: 554 YVAERLFELEPENSGAYVLLSNIYAGAGRWDDVAKIRTKLNDKGMKKVPGCTSIEIDGVV 613
Query: 581 HKFRASDRSHDRSEEIYTIID 601
H+F D+ H +SE I+ ++D
Sbjct: 614 HEFLVGDKFHPQSENIFRMLD 634
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 123/427 (28%), Positives = 197/427 (46%), Gaps = 55/427 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY + G L A+ VF RD VS+ +++T + G V +A + + + D +V
Sbjct: 171 MYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEGHVDDARRLFDEIPAKD-----VV 225
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A+I G+ Q+G EEA+ RMQ + PN T+ SVL AC L+ L LGK ++
Sbjct: 226 SWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLRSLELGKWIGSWV 285
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
GF N +VN LVD+Y +CG++ +A K+F K+ + NT+I GYC
Sbjct: 286 RDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIGGYC--------- 336
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
HL SLY+EA +F ++++R+ + P TF +VL A
Sbjct: 337 -------HL-------------------SLYEEALVLF-EVMLRENVTPNDVTFLAVLPA 369
Query: 241 CADMNSLRKGKEIHALA----IALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
CA + +L GK +HA G ++ + +++ MY + + A+ F + +
Sbjct: 370 CASLGALDLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRS 429
Query: 297 NLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHA 356
G N + A+ LF EM++ PD T +LSAC+ +E G H
Sbjct: 430 LASWNAMISGLAMNGHAERALGLFEEMINEGFQPDDITFVGVLSACTQAGFVELG---HR 486
Query: 357 YAIRCGYDSDV-----HIGTALVDMYAKCGSLKHARLAYKRIST-PDLVSQNAMLTAYAM 410
Y D + H G ++D+ A+ G A++ + PD ++L A +
Sbjct: 487 YFSSMNKDYGISPKLQHYG-CMIDLLARSGKFDEAKVLMGNMEMEPDGAIWGSLLNACRI 545
Query: 411 HGHGKEG 417
HG + G
Sbjct: 546 HGQVEFG 552
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 140/322 (43%), Gaps = 65/322 (20%)
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRY---QDLVAAQMAFDEI 292
++L C D+ SL K+IH+L I GL + F L+E +C +DL A F I
Sbjct: 30 NLLAKCPDIPSL---KQIHSLIIKSGLHNTLFAQSKLIE-FCALSPSRDLSYALSLFHSI 85
Query: 293 ENIENLLGKMKEDGFEPNVYTWN--------------AMQLFSEMLSLDLTPDIYTVGII 338
+ PN++ WN ++ LFS+ML L P+ +T +
Sbjct: 86 HHQ------------PPNIFIWNTLIRAHSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSL 133
Query: 339 LSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKR------ 392
+C+ KQ+HA+A++ H+ T+L+ MY++ G L+HARL + +
Sbjct: 134 FKSCAKSKATHEAKQLHAHALKLALHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDA 193
Query: 393 -------------------------ISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILAS 427
I D+VS NAM+ Y G +E +A F R+ +
Sbjct: 194 VSFTALITGYVSEGHVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEA 253
Query: 428 GFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEA 487
P+ + +S LSAC H S++ G + +L+ +VD+ S+ GE+G A
Sbjct: 254 DVSPNQSTMVSVLSACGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTA 313
Query: 488 YEFIKKIPMAPDSVMWGALLGG 509
+ + D ++W ++GG
Sbjct: 314 RKLFDGME-DKDVILWNTMIGG 334
>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
Length = 704
Score = 367 bits (943), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 204/602 (33%), Positives = 321/602 (53%), Gaps = 73/602 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC ++DA +F MPERD LV
Sbjct: 74 MYAKCRQINDAYNMFDRMPERD------------------------------------LV 97
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
W+ +I G+ QNG+ + A+ ++ RM EG P++ T+ S+LPA A + L +G HGY+
Sbjct: 98 CWNTMISGYAQNGFAKVALMLVLRMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYV 157
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R GF S V LVD+Y +CG +V+ AR
Sbjct: 158 LRAGFESLVNVSTALVDMYSKCG-------------------------------SVSIAR 186
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+FD M+H R ++SWNSMI GYV + + A +F+ +L +G++PT+ T L A
Sbjct: 187 VIFDGMDH----RTVVSWNSMIDGYVQSGDAEGAMLIFQKML-DEGVQPTNVTVMGALHA 241
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CAD+ L +GK +H L L L SD V +L+ MY + + + A F + N +
Sbjct: 242 CADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLVSW 301
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G+ N A+ F EM S ++ PD +T+ ++ A + L+ + K +H IR
Sbjct: 302 NAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLVIR 361
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
D +V + TALVDMYAKCG++ AR + ++ +++ NAM+ Y HG GK +
Sbjct: 362 RFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGKTSVEL 421
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLS 479
F+ + +P+ I+FL ALSAC H+G ++ G FF+ M Y ++P++ HY MVDLL
Sbjct: 422 FKEMKKGTIKPNDITFLCALSACSHSGLVEEGLCFFESMKKDYGIEPTMDHYGAMVDLLG 481
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
RAG L +A++FI+K+P+ P ++GA+LG C H N++ G+ AA + +L P++ G +V+
Sbjct: 482 RAGRLNQAWDFIQKMPIKPGITVYGAMLGACKIHKNVDLGEKAAFEIFKLNPDDGGYHVL 541
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTI 599
LAN++A A W +A+ R M+ + K+PGCS +E +E+H F + SH +S++IY+
Sbjct: 542 LANIYATASMWGKVAKVRTIMEKSGLQKTPGCSLVEIGNEVHSFYSGTTSHPQSKKIYSY 601
Query: 600 ID 601
++
Sbjct: 602 LE 603
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 147/314 (46%), Gaps = 2/314 (0%)
Query: 201 MISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIAL 260
M+ GY +S D A S F + D + P + F +L C D + L++GKEIH I
Sbjct: 1 MLKGYAKSSSLDSALSFFSRM-KHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITS 59
Query: 261 GLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLF 320
G + F +V MY + + + A FD + + + G+ N + A+ L
Sbjct: 60 GFSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLV 119
Query: 321 SEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKC 380
M PD T+ IL A + + G VH Y +R G++S V++ TALVDMY+KC
Sbjct: 120 LRMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKC 179
Query: 381 GSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSAL 440
GS+ AR+ + + +VS N+M+ Y G + + F+++L G +P +++ + AL
Sbjct: 180 GSVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGAL 239
Query: 441 SACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDS 500
AC G ++ G L+ + + ++ + S+ + A + K +
Sbjct: 240 HACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLR-NKTL 298
Query: 501 VMWGALLGGCVSHG 514
V W A++ G +G
Sbjct: 299 VSWNAMILGYAQNG 312
>gi|242037917|ref|XP_002466353.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
gi|241920207|gb|EER93351.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
Length = 862
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 206/599 (34%), Positives = 317/599 (52%), Gaps = 73/599 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC LDDA ++F+++P D LV
Sbjct: 286 MYAKCRCLDDAWRLFELLPRDD------------------------------------LV 309
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+ +I G QNG +EA+G+ M G P++ TL S+LPA L L GKE HGYI
Sbjct: 310 TWNGMISGCVQNGLLDEALGLFCDMLRSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYI 369
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
RN + F+V+ LVD+Y +C D V AR
Sbjct: 370 IRNCVHMDAFLVSALVDIYFKCRD-------------------------------VRTAR 398
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
L+D + V G +++ISGYV N + ++A MFR LL I+P + T SVL A
Sbjct: 399 NLYDAARAIDVVIG----STVISGYVLNGMSEKALQMFRYLL-EQCIKPNAVTVASVLPA 453
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA +++L G+EIH + + +V AL++MY + L + F ++ + +
Sbjct: 454 CASISALPLGQEIHGYVLRNAYEGKCYVESALMDMYAKCGRLDLSHYIFSKMSLKDEVTW 513
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
F N A+ LF +M + + T+ LSAC+SL + GK++H I+
Sbjct: 514 NSMISSFSQNGEPQEALDLFRQMCMEGIKYNNVTISSALSACASLPAIYYGKEIHGVIIK 573
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
+D+ +AL+DMYAKCG+++ A ++ + + VS N++++AY HG KE ++
Sbjct: 574 GPIKADIFAESALIDMYAKCGNMELALRVFEFMPDKNEVSWNSIISAYGAHGLVKESVSF 633
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLS 479
R+ G++PDH++FL+ +SAC HAG ++ G + F M Y + P ++H+ CMVDL S
Sbjct: 634 LHRMQEEGYKPDHVTFLALISACAHAGLVEEGLQLFQCMTKEYLIAPRMEHFACMVDLYS 693
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
R+G L +A +FI +P PD+ +WGALL C H N+E IA+ L +L+P N+G YV+
Sbjct: 694 RSGRLDKAIQFIADMPFKPDAGIWGALLHACRVHRNVELADIASQELFKLDPGNSGYYVL 753
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYT 598
++N+ A AGRW +++ R+ MKD ++ K PG SW++ + H F ASD+SH SE+IYT
Sbjct: 754 MSNINAVAGRWDGVSKVRRLMKDNKILKIPGYSWVDVNNSSHLFVASDKSHPESEDIYT 812
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 139/514 (27%), Positives = 241/514 (46%), Gaps = 73/514 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY G L DA+ F MP RDCV WN
Sbjct: 185 MYSDAGLLRDARDAFDGMPWRDCVLWN--------------------------------- 211
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
++ G+ + G A+ + M+ G EPN TL+ L CA L G + H
Sbjct: 212 ---VMMDGYIKAGDVGGAVRLFRNMRVSGCEPNFATLACFLSVCAAEADLLSGVQLHSLA 268
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G V N L+ +Y +C + A ++F
Sbjct: 269 VKCGLEQEVAVANTLLSMYAKCRCLDDAWRLF---------------------------- 300
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
EL + + +++WN MISG V N L DEA +F D+L R G P S T S+L A
Sbjct: 301 ELLPRDD-------LVTWNGMISGCVQNGLLDEALGLFCDML-RSGARPDSVTLVSLLPA 352
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
D+N L++GKE+H I + D F+ ALV++Y + +D+ A+ +D I+ ++G
Sbjct: 353 LTDLNGLKQGKEVHGYIIRNCVHMDAFLVSALVDIYFKCRDVRTARNLYDAARAIDVVIG 412
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G+ N + A+Q+F +L + P+ TV +L AC+S++ + G+++H Y +R
Sbjct: 413 STVISGYVLNGMSEKALQMFRYLLEQCIKPNAVTVASVLPACASISALPLGQEIHGYVLR 472
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
Y+ ++ +AL+DMYAKCG L + + ++S D V+ N+M+++++ +G +E +
Sbjct: 473 NAYEGKCYVESALMDMYAKCGRLDLSHYIFSKMSLKDEVTWNSMISSFSQNGEPQEALDL 532
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSR 480
FR++ G + ++++ SALSAC +I G E ++ +K + + ++D+ ++
Sbjct: 533 FRQMCMEGIKYNNVTISSALSACASLPAIYYGKEIHGVIIKGPIKADIFAESALIDMYAK 592
Query: 481 AGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
G + A + +P + V W +++ +HG
Sbjct: 593 CGNMELALRVFEFMP-DKNEVSWNSIISAYGAHG 625
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/364 (25%), Positives = 159/364 (43%), Gaps = 32/364 (8%)
Query: 93 NARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIF 152
+A L ++L C L LG + H +G +SN
Sbjct: 31 SADRLLALLRGCVSAPHLPLGLQIHARAVVSGALSN------------------------ 66
Query: 153 SKFSIKNEVSCNTIIVG-YCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLY 211
N ++ +T ++G Y +A +F + + WN +I G+ +
Sbjct: 67 -----HNHLALHTRLLGMYVLARRFRDAVAVFSALPRAAAGSSL-PWNWLIRGFTAAGHH 120
Query: 212 DEAFSMFRDLLMRDGI-EPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGG 270
A + + P + T V+ +CA + ++ G+ +H A A GL SD +VG
Sbjct: 121 SLAVLFYVKMWTHPAAPSPDAHTLPYVVKSCAALGAVSLGRLVHRTARATGLASDVYVGS 180
Query: 271 ALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTP 330
AL++MY L A+ AFD + + +L + DG+ A++LF M P
Sbjct: 181 ALIKMYSDAGLLRDARDAFDGMPWRDCVLWNVMMDGYIKAGDVGGAVRLFRNMRVSGCEP 240
Query: 331 DIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAY 390
+ T+ LS C++ A + G Q+H+ A++CG + +V + L+ MYAKC L A +
Sbjct: 241 NFATLACFLSVCAAEADLLSGVQLHSLAVKCGLEQEVAVANTLLSMYAKCRCLDDAWRLF 300
Query: 391 KRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIK 450
+ + DLV+ N M++ +G E + F +L SG RPD ++ +S L A +K
Sbjct: 301 ELLPRDDLVTWNGMISGCVQNGLLDEALGLFCDMLRSGARPDSVTLVSLLPALTDLNGLK 360
Query: 451 TGSE 454
G E
Sbjct: 361 QGKE 364
>gi|224096022|ref|XP_002310520.1| predicted protein [Populus trichocarpa]
gi|222853423|gb|EEE90970.1| predicted protein [Populus trichocarpa]
Length = 710
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 207/639 (32%), Positives = 336/639 (52%), Gaps = 80/639 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+YGKCG LD A+KVF M ER+ S+NS+++ G V E+ M D
Sbjct: 68 VYGKCGYLDYARKVFDRMSERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQ-----C 122
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+++I GF Q+ EEA+ RM + N + S L AC+RL+ L LG + HG I
Sbjct: 123 SWNSMIAGFAQHDRFEEALDWFVRMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLI 182
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+++ + + F+ +GL+D Y +CG +VG C AR
Sbjct: 183 SKSKYSLDVFMGSGLIDFYSKCG-----------------------LVG-C-------AR 211
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+FD ME ++ ++SWN +I+ Y N EA F + G +P T SV+ A
Sbjct: 212 RVFDGME----EKNVVSWNCLITCYEQNGPAIEALEAF-GRMTELGFKPDEVTLASVVSA 266
Query: 241 CADMNSLRKGKEIHALAI-ALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDE-------- 291
CA + + ++G +IHA + + ++D +G ALV+MY + + A+ FD
Sbjct: 267 CATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVRNAVS 326
Query: 292 -------------IENIENLLGKMKED----------GFEPNVYTWNAMQLFSEMLSLDL 328
++ ++ +K+ G+ N A+ LF + +
Sbjct: 327 ETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFRMLKRESV 386
Query: 329 TPDIYTVGIILSACSSLATMERGKQVHAYAIRCGY------DSDVHIGTALVDMYAKCGS 382
P YT G +L+A ++LA +E G+Q H++ ++ G+ + D+ +G +L+DMY KCGS
Sbjct: 387 CPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMKCGS 446
Query: 383 LKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSA 442
++ ++ + D VS N M+ YA +G+G E + F+++L SG +PDH++ + L A
Sbjct: 447 VEEGLRVFENMVEKDHVSWNTMIIGYAQNGYGMEALELFQKMLESGEKPDHVTMIGTLCA 506
Query: 443 CVHAGSIKTGSE-FFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSV 501
C HAG ++ G FF + + + P HYTCMVDLL RAG L EA + I+ +P PD+V
Sbjct: 507 CSHAGLVEEGRRYFFSMTKEHGLLPVKDHYTCMVDLLGRAGCLEEAKDLIESMPKQPDAV 566
Query: 502 MWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMK 561
+W +LL C H N+ G+ A+++ E++P ++G YV+LAN+++ GRW D R+ M+
Sbjct: 567 VWSSLLSACKVHRNITLGKYVAEKIFEIDPTSSGPYVLLANMYSELGRWGDAVSVRKLMR 626
Query: 562 DRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTII 600
R + K PGCSWI+ + +H F D+ H + +EIY+I+
Sbjct: 627 RRGVVKQPGCSWIDIQSNVHVFMVKDKRHPQKKEIYSIL 665
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 120/460 (26%), Positives = 207/460 (45%), Gaps = 44/460 (9%)
Query: 93 NARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIF 152
++ + +L C +L+ + HG + + F F+ N L+DVY +CG + A K+F
Sbjct: 23 DSSPFAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVF 82
Query: 153 SKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYD 212
+ S +N S N+II G V E+ LF M ++ SWNSMI+G+ + ++
Sbjct: 83 DRMSERNVFSFNSIISTLMRWGFVDESAWLFSLMP----EKDQCSWNSMIAGFAQHDRFE 138
Query: 213 EAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGAL 272
EA F + RD ++FGS L AC+ + L+ G +IH L D F+G L
Sbjct: 139 EALDWFVR-MHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGL 197
Query: 273 VEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDI 332
++ Y + + A+ FD +E + +E N A++ F M L PD
Sbjct: 198 IDFYSKCGLVGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDE 257
Query: 333 YTVGIILSACSSLATMERGKQVHAYAIRC-GYDSDVHIGTALVDMYAKCGSLKHARLAYK 391
T+ ++SAC++LA + G Q+HA ++ + +D+ +G ALVDMYAKCG + AR +
Sbjct: 258 VTLASVVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFD 317
Query: 392 R-------------------------------ISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
R I D+VS NA++ Y +G +E +
Sbjct: 318 RMPVRNAVSETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGL 377
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVK------PSLKHYTCM 474
FR + P H +F + L+A + ++ G + + + + P + +
Sbjct: 378 FRMLKRESVCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSL 437
Query: 475 VDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
+D+ + G + E + + + D V W ++ G +G
Sbjct: 438 IDMYMKCGSVEEGLRVFENM-VEKDHVSWNTMIIGYAQNG 476
>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 900
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 206/599 (34%), Positives = 318/599 (53%), Gaps = 74/599 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC DA++VF MP RD V
Sbjct: 269 MYAKCRRPGDARRVFDRMPARD------------------------------------RV 292
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
+W+A++ G+ +NG E A+GM+ RMQ E G P+A TL SVLPACA Q L +E H +
Sbjct: 293 AWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALGACREVHAF 352
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
R GF V ++DVY C+ G V A
Sbjct: 353 AVRGGFDEQVNVSTAILDVY-------------------------------CKCGAVDSA 381
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
R++FD M+ R +SWN+MI GY +N EA ++F+ ++ +G++ T + + L
Sbjct: 382 RKVFDGMQ----DRNSVSWNAMIKGYAENGDATEALALFKRMV-GEGVDVTDVSVLAALH 436
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
AC ++ L +G+ +H L + +GL+S+ V AL+ MYC+ + A FDE+ +
Sbjct: 437 ACGELGFLDEGRRVHELLVRIGLESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTRVS 496
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
G N + +A++LFS M ++ PD +T+ I+ A + ++ + + +H Y+I
Sbjct: 497 WNAMILGCTQNGSSEDAVRLFSRMQLENVKPDSFTLVSIIPALADISDPLQARWIHGYSI 556
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
R D DV++ TAL+DMYAKCG + AR + +++ NAM+ Y HG GK +
Sbjct: 557 RLHLDQDVYVLTALIDMYAKCGRVSIARSLFNSARDRHVITWNAMIHGYGSHGSGKVAVE 616
Query: 420 HFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLL 478
F + +SG P+ +FLS LSAC HAG + G E+F M Y ++P ++HY MVDLL
Sbjct: 617 LFEEMKSSGKVPNETTFLSVLSACSHAGLVDEGQEYFSSMKEDYGLEPGMEHYGTMVDLL 676
Query: 479 SRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYV 538
RAG+L EA+ FI+K+PM P ++GA+LG C H N+E + +A R+ ELEP +V
Sbjct: 677 GRAGKLHEAWSFIQKMPMEPGISVYGAMLGACKLHKNVELAEESAQRIFELEPEEGVYHV 736
Query: 539 MLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
+LAN++A A W D+AR R M+ + + K+PG S ++ ++EIH F + +H ++++IY
Sbjct: 737 LLANIYANASLWKDVARVRTAMEKKGLQKTPGWSIVQLKNEIHTFYSGSTNHQQAKDIY 795
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 106/455 (23%), Positives = 186/455 (40%), Gaps = 48/455 (10%)
Query: 87 AEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDML 146
A G P RT +S+L CA L+ G+ H + G L ++Y +C
Sbjct: 218 ASGSGPVLRTFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALANMYAKCRRPG 277
Query: 147 SALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYV 206
A ++F + ++ V+ N ++ GY NG
Sbjct: 278 DARRVFDRMPARDRVAWNALVAGYARNG-------------------------------- 305
Query: 207 DNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDT 266
L + A M + DG P + T SVL ACAD +L +E+HA A+ G
Sbjct: 306 ---LAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALGACREVHAFAVRGGFDEQV 362
Query: 267 FVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSL 326
V A++++YC+ + +A+ FD +++ ++ G+ N A+ LF M+
Sbjct: 363 NVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAENGDATEALALFKRMVGE 422
Query: 327 DLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHA 386
+ +V L AC L ++ G++VH +R G +S+V++ AL+ MY KC A
Sbjct: 423 GVDVTDVSVLAALHACGELGFLDEGRRVHELLVRIGLESNVNVMNALITMYCKCKRTDLA 482
Query: 387 RLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHA 446
+ + VS NAM+ +G ++ + F R+ +PD + +S + A
Sbjct: 483 AQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQLENVKPDSFTLVSIIPALADI 542
Query: 447 GSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDS--VMWG 504
+ + T ++D+ ++ G + A A D + W
Sbjct: 543 SDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVSIARSLFNS---ARDRHVITWN 599
Query: 505 ALLGGCVSHGNLEFGQIAADRLIELE-----PNNT 534
A++ G SHG+ G++A + E++ PN T
Sbjct: 600 AMIHGYGSHGS---GKVAVELFEEMKSSGKVPNET 631
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 142/305 (46%), Gaps = 2/305 (0%)
Query: 214 AFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALV 273
A + F + G P TF S+L CA L G+ +HA A GL + AL
Sbjct: 208 ALAAFAAMSPASGSGPVLRTFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALA 267
Query: 274 EMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLD-LTPDI 332
MY + + A+ FD + + + G+ N A+ + M D PD
Sbjct: 268 NMYAKCRRPGDARRVFDRMPARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDA 327
Query: 333 YTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKR 392
T+ +L AC+ + ++VHA+A+R G+D V++ TA++D+Y KCG++ AR +
Sbjct: 328 VTLVSVLPACADAQALGACREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDG 387
Query: 393 ISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTG 452
+ + VS NAM+ YA +G E +A F+R++ G +S L+AL AC G + G
Sbjct: 388 MQDRNSVSWNAMIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEG 447
Query: 453 SEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVS 512
+L+ ++ ++ ++ + + A + ++ V W A++ GC
Sbjct: 448 RRVHELLVRIGLESNVNVMNALITMYCKCKRTDLAAQVFDELGY-KTRVSWNAMILGCTQ 506
Query: 513 HGNLE 517
+G+ E
Sbjct: 507 NGSSE 511
>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
Length = 736
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 198/549 (36%), Positives = 305/549 (55%), Gaps = 9/549 (1%)
Query: 57 PNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEF 116
PN V W+ +I G + + A+ M + G EPN T S+ +C +++ GK+
Sbjct: 91 PNHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGKQV 150
Query: 117 HGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNV 176
H ++ + G N FV L+++Y + G++++A +F K S+++ VS +I GY G +
Sbjct: 151 HAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGFL 210
Query: 177 AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGS 236
EARELFD++ R ++SWN+MISGY + +EA + F ++ R + P T S
Sbjct: 211 DEARELFDEIP----VRDVVSWNAMISGYAQSGRVEEAMAFFEEM-RRAKVTPNVSTMLS 265
Query: 237 VLIACADM-NSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
VL ACA +SL+ G + + GL S+ + L++MY + DL A F++I++
Sbjct: 266 VLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDK 325
Query: 296 ENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVH 355
+ + G+ A+ LF M+ ++ P+ T IL AC++L ++ GK VH
Sbjct: 326 NVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVH 385
Query: 356 AYAIRC--GYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGH 413
AY + + V + T+L+DMYAKCG L A+ + ++T L + NAM++ +AMHGH
Sbjct: 386 AYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFAMHGH 445
Query: 414 GKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYT 472
+ F R+ + GF PD I+F+ L+AC HAG + G +F M Y V P L HY
Sbjct: 446 TDTALGLFSRMTSEGFVPDDITFVGVLTACKHAGLLSLGRRYFSSMIQDYKVSPKLPHYG 505
Query: 473 CMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPN 532
CM+DL RAG EA +K + M PD +W +LLG C H +E + A L ELEP
Sbjct: 506 CMIDLFGRAGLFDEAETLVKNMEMKPDGAIWCSLLGACRIHRRIELAESVAKHLFELEPE 565
Query: 533 NTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDR 592
N YV+L+N++A AGRW D+A+ R ++ D RM K PGCS IE +H+F D+ H +
Sbjct: 566 NPSAYVLLSNIYAGAGRWEDVAKIRTRLNDNRMKKVPGCSSIEVDSVVHEFLVGDKVHPQ 625
Query: 593 SEEIYTIID 601
S EIY ++D
Sbjct: 626 SNEIYKMLD 634
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 126/420 (30%), Positives = 194/420 (46%), Gaps = 54/420 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY + G L +A+ VF RD VS+ +++T A+ G + EA E + + D +V
Sbjct: 172 MYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGFLDEARELFDEIPVRD-----VV 226
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARL-QKLSLGKEFHGY 119
SW+A+I G+ Q+G EEA+ M+ + PN T+ SVL ACA+ L LG +
Sbjct: 227 SWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQLGNWVRSW 286
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
I G SN +VNGL+D+Y +CGD+ A +F K KN VS N +I GY
Sbjct: 287 IEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVSWNVMIGGYT-------- 338
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
H+ S Y EA +FR +M+ I+P TF S+L
Sbjct: 339 --------HM-------------------SCYKEALGLFRR-MMQSNIDPNDVTFLSILP 370
Query: 240 ACADMNSLRKGKEIHALAIA--LGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
ACA++ +L GK +HA +++ + +L++MY + DL A+ FD +
Sbjct: 371 ACANLGALDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSL 430
Query: 298 LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAY 357
GF + +T A+ LFS M S PD T +L+AC + G++ +
Sbjct: 431 ATWNAMISGFAMHGHTDTALGLFSRMTSEGFVPDDITFVGVLTACKHAGLLSLGRRYFSS 490
Query: 358 AIRCGYDSDV-----HIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNAMLTAYAMH 411
I+ D V H G ++D++ + G A K + PD ++L A +H
Sbjct: 491 MIQ---DYKVSPKLPHYG-CMIDLFGRAGLFDEAETLVKNMEMKPDGAIWCSLLGACRIH 546
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 141/307 (45%), Gaps = 37/307 (12%)
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCR---YQDLVAAQMAFDEIEN 294
L ++ +L+ K+IH+ I GL + F L+E +C + DL A F I N
Sbjct: 32 LTLLSNCKTLQTLKQIHSQIIKTGLHNTHFALSKLIE-FCAVSPHGDLSYALSLFKTIRN 90
Query: 295 IENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV 354
+++ G + + A++ + M+S P+ YT I +C+ + GKQV
Sbjct: 91 PNHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGKQV 150
Query: 355 HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKR---------------------- 392
HA+ ++ G + + + T+L++MYA+ G L +ARL + +
Sbjct: 151 HAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGFL 210
Query: 393 ---------ISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSAC 443
I D+VS NAM++ YA G +E +A F + + P+ + LS LSAC
Sbjct: 211 DEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSAC 270
Query: 444 VHAG-SIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVM 502
+G S++ G+ + + +++ ++D+ + G+L EA +KI + V
Sbjct: 271 AQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKI-QDKNVVS 329
Query: 503 WGALLGG 509
W ++GG
Sbjct: 330 WNVMIGG 336
>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 816
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 194/602 (32%), Positives = 320/602 (53%), Gaps = 73/602 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KC ++DA K+F+ MP+RD LV
Sbjct: 186 LYAKCRQIEDAYKMFERMPQRD------------------------------------LV 209
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ V+ G+ QNG+ A+ ++ +MQ G +P++ TL SVLPA A L+ L +G+ HGY
Sbjct: 210 SWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGYA 269
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R GF V ++D Y +CG + SA +F S +N
Sbjct: 270 FRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSRN--------------------- 308
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
++SWN+MI GY N +EAF+ F +L +G+EPT+ + L A
Sbjct: 309 --------------VVSWNTMIDGYAQNGESEEAFATFLKML-DEGVEPTNVSMMGALHA 353
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA++ L +G+ +H L + D V +L+ MY + + + A F +++ +
Sbjct: 354 CANLGDLERGRYVHRLLDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTW 413
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G+ N A+ LF EM S D+ PD +T+ +++A + L+ + K +H AIR
Sbjct: 414 NAMILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAKWIHGLAIR 473
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
D +V + TAL+D +AKCG+++ AR + + +++ NAM+ Y +GHG+E +
Sbjct: 474 TLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQERHVITWNAMIDGYGTNGHGREALDL 533
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLLS 479
F + +P+ I+FLS ++AC H+G ++ G +F+ M Y ++P++ HY MVDLL
Sbjct: 534 FNEMQNGSVKPNEITFLSVIAACSHSGLVEEGMYYFESMKENYGLEPTMDHYGAMVDLLG 593
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
RAG L +A++FI+ +P+ P + GA+LG C H N+E G+ AD L +L+P++ G +V+
Sbjct: 594 RAGRLDDAWKFIQDMPVKPGITVLGAMLGACRIHKNVELGEKTADELFDLDPDDGGYHVL 653
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTI 599
LAN++A A W +AR R M+ + + K+PGCS +E R+E+H F + +H +S+ IY
Sbjct: 654 LANMYASASMWDKVARVRTAMEKKGIQKTPGCSLVELRNEVHTFYSGSTNHPQSKRIYAY 713
Query: 600 ID 601
++
Sbjct: 714 LE 715
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/398 (25%), Positives = 198/398 (49%), Gaps = 21/398 (5%)
Query: 166 IIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRD 225
+I +C+ ++ EA +F+ +EH + + +++M+ GY NS +A F + + D
Sbjct: 82 LISLFCKFNSITEAARVFEPVEH----KLDVLYHTMLKGYAKNSTLRDAVR-FYERMRCD 136
Query: 226 GIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAA 285
+ P + F +L + LR+G+EIH + I G QS+ F A+V +Y + + + A
Sbjct: 137 EVMPVVYDFTYLLQLSGENLDLRRGREIHGMVITNGFQSNLFAMTAVVNLYAKCRQIEDA 196
Query: 286 QMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSL 345
F+ + + + G+ N + A+Q+ +M PD T+ +L A + L
Sbjct: 197 YKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVADL 256
Query: 346 ATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAML 405
+ G+ +H YA R G++ V++ TA++D Y KCGS++ ARL +K +S+ ++VS N M+
Sbjct: 257 KALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSRNVVSWNTMI 316
Query: 406 TAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVK 465
YA +G +E A F ++L G P ++S + AL AC + G ++ G L+ +
Sbjct: 317 DGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGDLERGRYVHRLLDEKKIG 376
Query: 466 PSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALL-----GGCVSHGNLEFGQ 520
+ ++ + S+ + A + V W A++ GCV+ F +
Sbjct: 377 FDVSVMNSLISMYSKCKRVDIAASVFGNLK-HKTVVTWNAMILGYAQNGCVNEALNLFCE 435
Query: 521 IAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQ 558
+ + +++P+ ++ +++ + A A DL+ TRQ
Sbjct: 436 MQSH---DIKPD---SFTLVSVITALA----DLSVTRQ 463
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 128/543 (23%), Positives = 226/543 (41%), Gaps = 84/543 (15%)
Query: 60 VSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
V + ++ G+ +N +A+ RM+ + + P + +L L G+E HG
Sbjct: 108 VLYHTMLKGYAKNSTLRDAVRFYERMRCDEVMPVVYDFTYLLQLSGENLDLRRGREIHGM 167
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ NGF SN F + +V++Y +C + A K+F +
Sbjct: 168 VITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMP----------------------- 204
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRD-GIEPTSFTFGSVL 238
QR ++SWN++++GY N A + L M++ G +P S T SVL
Sbjct: 205 ------------QRDLVSWNTVVAGYAQNGFARRAVQVV--LQMQEAGQKPDSITLVSVL 250
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
A AD+ +LR G+ IH A G + V A+++ Y + + +A++ F + + +
Sbjct: 251 PAVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSRNVV 310
Query: 299 LGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYA 358
DG+ N + A F +ML + P ++ L AC++L +ERG+ VH
Sbjct: 311 SWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGDLERGRYVHRLL 370
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGI 418
DV + +L+ MY+KC + A + + +V+ NAM+ YA +G E +
Sbjct: 371 DEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGCVNEAL 430
Query: 419 AHFRRILASGFRPDHISFLSALSAC---------------------------------VH 445
F + + +PD + +S ++A H
Sbjct: 431 NLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAKWIHGLAIRTLMDKNVFVCTALIDTH 490
Query: 446 A--GSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKI---PMAPDS 500
A G+I+T + FDLM V + M+D G EA + ++ + P+
Sbjct: 491 AKCGAIQTARKLFDLMQERHVIT----WNAMIDGYGTNGHGREALDLFNEMQNGSVKPNE 546
Query: 501 VMWGALLGGCVSHGNLEFGQIAADRLIE---LEPNNTGNYVMLANLFAYAGRWSDLARTR 557
+ + +++ C G +E G + + E LEP +Y + +L AGR D +
Sbjct: 547 ITFLSVIAACSHSGLVEEGMYYFESMKENYGLEP-TMDHYGAMVDLLGRAGRLDDAWKFI 605
Query: 558 QKM 560
Q M
Sbjct: 606 QDM 608
>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g18750, chloroplastic; Flags: Precursor
gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 198/579 (34%), Positives = 318/579 (54%), Gaps = 44/579 (7%)
Query: 20 ERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAI 79
ER+ V NS+V N V A + + M+ D ++SW+++I G+ NG E+ +
Sbjct: 228 ERNSVG-NSLVAFYLKNQRVDSARKVFDEMTERD-----VISWNSIINGYVSNGLAEKGL 281
Query: 80 GMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVY 139
+ +M G+E + T+ SV CA + +SLG+ H + F N L+D+Y
Sbjct: 282 SVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMY 341
Query: 140 RRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWN 199
+C G++ A+ +F +M R ++S+
Sbjct: 342 SKC-------------------------------GDLDSAKAVFREMS----DRSVVSYT 366
Query: 200 SMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIA 259
SMI+GY L EA +F ++ +GI P +T +VL CA L +GK +H
Sbjct: 367 SMIAGYAREGLAGEAVKLFEEM-EEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKE 425
Query: 260 LGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQL 319
L D FV AL++MY + + A++ F E+ + + G+ N Y A+ L
Sbjct: 426 NDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSL 485
Query: 320 FSEMLSLD-LTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYA 378
F+ +L +PD TV +L AC+SL+ ++G+++H Y +R GY SD H+ +LVDMYA
Sbjct: 486 FNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYA 545
Query: 379 KCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLS 438
KCG+L A + + I++ DLVS M+ Y MHG GKE IA F ++ +G D ISF+S
Sbjct: 546 KCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVS 605
Query: 439 ALSACVHAGSIKTGSEFFDLMAYY-DVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMA 497
L AC H+G + G FF++M + ++P+++HY C+VD+L+R G+L +AY FI+ +P+
Sbjct: 606 LLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIP 665
Query: 498 PDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTR 557
PD+ +WGALL GC H +++ + A+++ ELEP NTG YV++AN++A A +W + R R
Sbjct: 666 PDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLR 725
Query: 558 QKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEI 596
+++ R + K+PGCSWIE + ++ F A D S+ +E I
Sbjct: 726 KRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENI 764
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 127/545 (23%), Positives = 230/545 (42%), Gaps = 75/545 (13%)
Query: 44 ECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPA 103
+C++ +++ D + + + F ++G E A+ +L ++P RTL SVL
Sbjct: 49 DCVDSITTFDRSVTDA---NTQLRRFCESGNLENAVKLLCVSGKWDIDP--RTLCSVLQL 103
Query: 104 CARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSC 163
CA + L GKE +I NGF+ + + + L +Y CGD+ A ++F + I+ +
Sbjct: 104 CADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFW 163
Query: 164 NTIIVGYCENGNVAEARELFDQMEHLGVQRGIISW------------------------- 198
N ++ ++G+ + + LF +M GV+ ++
Sbjct: 164 NILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILK 223
Query: 199 ----------NSMISGYVDNSLYDEAFSMFRDLLMRD----------------------- 225
NS+++ Y+ N D A +F ++ RD
Sbjct: 224 SGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSV 283
Query: 226 -------GIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCR 278
GIE T SV CAD + G+ +H++ + + L++MY +
Sbjct: 284 FVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSK 343
Query: 279 YQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGII 338
DL +A+ F E+ + + G+ A++LF EM ++PD+YTV +
Sbjct: 344 CGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAV 403
Query: 339 LSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDL 398
L+ C+ ++ GK+VH + D+ + AL+DMYAKCGS++ A L + + D+
Sbjct: 404 LNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDI 463
Query: 399 VSQNAMLTAYAMHGHGKEGIAHFRRILASG-FRPDHISFLSALSACVHAGSIKTGSEFFD 457
+S N ++ Y+ + + E ++ F +L F PD + L AC + G E
Sbjct: 464 ISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHG 523
Query: 458 LMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
+ +VD+ ++ G L A+ I + D V W ++ G HG
Sbjct: 524 YIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIA-SKDLVSWTVMIAGYGMHG--- 579
Query: 518 FGQIA 522
FG+ A
Sbjct: 580 FGKEA 584
>gi|297723179|ref|NP_001173953.1| Os04g0436350 [Oryza sativa Japonica Group]
gi|21740490|emb|CAD40814.1| OSJNBa0006B20.5 [Oryza sativa Japonica Group]
gi|125590470|gb|EAZ30820.1| hypothetical protein OsJ_14890 [Oryza sativa Japonica Group]
gi|218194889|gb|EEC77316.1| hypothetical protein OsI_15981 [Oryza sativa Indica Group]
gi|255675491|dbj|BAH92681.1| Os04g0436350 [Oryza sativa Japonica Group]
Length = 685
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 211/638 (33%), Positives = 329/638 (51%), Gaps = 80/638 (12%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y + GSL DA++VF MP R+ S+N++++ACA G +AL + P+ S
Sbjct: 60 YARLGSLHDARRVFDGMPHRNTFSYNALLSACARLGRADDALALFGAIPD-----PDQCS 114
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
++AV+ Q+G +A+ L M A+ NA + +S L ACA + G++ H +T
Sbjct: 115 YNAVVAALAQHGRGGDALRFLAAMHADDFVLNAYSFASALSACASEKASRTGEQVHALVT 174
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
++ S+ ++ LVD+Y +C A K+F +N VS N++I Y +NG V EA
Sbjct: 175 KSSHGSDVYIGTALVDMYAKCERPEEAQKVFDAMPERNIVSWNSLITCYEQNGPVDEALA 234
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
LF +M M+DG P T SV+ AC
Sbjct: 235 LFVRM------------------------------------MKDGFVPDEVTLASVMSAC 258
Query: 242 ADMNSLRKGKEIHALAIALG-LQSDTFVGGALVEMYCRYQDLVAAQMAFDE------IEN 294
A + + R+G+++H + + D + ALV+MY + A+ FD +
Sbjct: 259 AGLAAGREGRQVHTRMVKSDRFREDMVLNNALVDMYAKCGRTWEAKCVFDRMAIRSVVSE 318
Query: 295 IENLLGKMKEDG-----------FEPNVYTWN--------------AMQLFSEMLSLDLT 329
+ G K E NV WN A++LF + +
Sbjct: 319 TSMITGYAKSANVGDAQAVFLQMVEKNVVAWNVLIATYAHNSEEEEALRLFVRLKRESVW 378
Query: 330 PDIYTVGIILSACSSLATMERGKQVHAYAIRCGY------DSDVHIGTALVDMYAKCGSL 383
P YT G +L+AC++LA ++ G+Q H + ++ G+ +SDV +G +LVDMY K GS+
Sbjct: 379 PTHYTYGNVLNACANLANLQLGQQAHVHVLKEGFRFDSGPESDVFVGNSLVDMYLKTGSI 438
Query: 384 KHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSAC 443
++R++ D VS NAM+ YA +G K+ + F R+L S RPD ++ + LSAC
Sbjct: 439 SDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALLLFERMLCSNERPDSVTMIGVLSAC 498
Query: 444 VHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVM 502
H+G +K G +F M + + P+ HYTCM+DLL RAG L E E I+ +PM PD+V+
Sbjct: 499 GHSGLVKEGRRYFQSMTEDHGIIPTRDHYTCMIDLLGRAGHLKEVEELIENMPMEPDAVL 558
Query: 503 WGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKD 562
W +LLG C H N++ G+ AA +L EL+P+N+G YV+L+N++A G+W+D+ R R+ MK
Sbjct: 559 WASLLGACRLHKNIDMGEWAAGKLFELDPDNSGPYVLLSNMYAELGKWADVFRVRRSMKH 618
Query: 563 RRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTII 600
R + K PGCSWIE +++ F A D H EI+ +
Sbjct: 619 RGVSKQPGCSWIEIGRKVNVFLARDNIHPCRNEIHDTL 656
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 123/420 (29%), Positives = 205/420 (48%), Gaps = 50/420 (11%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC ++A+KVF MPER+ VSWNS++T NG V EAL
Sbjct: 191 MYAKCERPEEAQKVFDAMPERNIVSWNSLITCYEQNGPVDEAL----------------- 233
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+ RM +G P+ TL+SV+ ACA L G++ H +
Sbjct: 234 -------------------ALFVRMMKDGFVPDEVTLASVMSACAGLAAGREGRQVHTRM 274
Query: 121 TRNG-FMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
++ F + + N LVD+Y +CG A +F + +I++ VS ++I GY ++ NV +A
Sbjct: 275 VKSDRFREDMVLNNALVDMYAKCGRTWEAKCVFDRMAIRSVVSETSMITGYAKSANVGDA 334
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
+ +F QM V++ +++WN +I+ Y NS +EA +F L R+ + PT +T+G+VL
Sbjct: 335 QAVFLQM----VEKNVVAWNVLIATYAHNSEEEEALRLFVR-LKRESVWPTHYTYGNVLN 389
Query: 240 ACADMNSLRKGKEIHALAIALGL------QSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
ACA++ +L+ G++ H + G +SD FVG +LV+MY + + F+ +
Sbjct: 390 ACANLANLQLGQQAHVHVLKEGFRFDSGPESDVFVGNSLVDMYLKTGSISDGAKVFERMA 449
Query: 294 NIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ 353
+N+ G+ N +A+ LF ML + PD T+ +LSAC ++ G++
Sbjct: 450 ARDNVSWNAMIVGYAQNGRAKDALLLFERMLCSNERPDSVTMIGVLSACGHSGLVKEGRR 509
Query: 354 -VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNAMLTAYAMH 411
+ G T ++D+ + G LK + + PD V ++L A +H
Sbjct: 510 YFQSMTEDHGIIPTRDHYTCMIDLLGRAGHLKEVEELIENMPMEPDAVLWASLLGACRLH 569
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 104/441 (23%), Positives = 191/441 (43%), Gaps = 44/441 (9%)
Query: 125 FMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFD 184
F F++N L+ Y R G + A ++F +N S N ++ G +A LF
Sbjct: 46 FAGETFLLNTLLSAYARLGSLHDARRVFDGMPHRNTFSYNALLSACARLGRADDALALFG 105
Query: 185 QMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADM 244
+ S+N++++ + +A F + D +++F S L ACA
Sbjct: 106 AIP----DPDQCSYNAVVAALAQHGRGGDALR-FLAAMHADDFVLNAYSFASALSACASE 160
Query: 245 NSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKE 304
+ R G+++HAL SD ++G ALV+MY + + AQ FD + +
Sbjct: 161 KASRTGEQVHALVTKSSHGSDVYIGTALVDMYAKCERPEEAQKVFDAMPERNIVSWNSLI 220
Query: 305 DGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCG-Y 363
+E N A+ LF M+ PD T+ ++SAC+ LA G+QVH ++ +
Sbjct: 221 TCYEQNGPVDEALALFVRMMKDGFVPDEVTLASVMSACAGLAAGREGRQVHTRMVKSDRF 280
Query: 364 DSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAY--------------- 408
D+ + ALVDMYAKCG A+ + R++ +VS+ +M+T Y
Sbjct: 281 REDMVLNNALVDMYAKCGRTWEAKCVFDRMAIRSVVSETSMITGYAKSANVGDAQAVFLQ 340
Query: 409 -------------AMHGHG---KEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTG 452
A + H +E + F R+ P H ++ + L+AC + +++ G
Sbjct: 341 MVEKNVVAWNVLIATYAHNSEEEEALRLFVRLKRESVWPTHYTYGNVLNACANLANLQLG 400
Query: 453 SE----FFDLMAYYDVKPSLKHYT--CMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGAL 506
+ +D P + +VD+ + G + + + +++ A D+V W A+
Sbjct: 401 QQAHVHVLKEGFRFDSGPESDVFVGNSLVDMYLKTGSISDGAKVFERMA-ARDNVSWNAM 459
Query: 507 LGGCVSHGNLEFGQIAADRLI 527
+ G +G + + +R++
Sbjct: 460 IVGYAQNGRAKDALLLFERML 480
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 83/227 (36%), Gaps = 39/227 (17%)
Query: 373 LVDMYAKCGSLKHARLAYK-------------------------------RISTPDLVSQ 401
L+ YA+ GSL AR + I PD S
Sbjct: 56 LLSAYARLGSLHDARRVFDGMPHRNTFSYNALLSACARLGRADDALALFGAIPDPDQCSY 115
Query: 402 NAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY 461
NA++ A A HG G + + + A F + SF SALSAC + +TG + L+
Sbjct: 116 NAVVAALAQHGRGGDALRFLAAMHADDFVLNAYSFASALSACASEKASRTGEQVHALVTK 175
Query: 462 YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALL-----GGCVSHGNL 516
+ T +VD+ ++ EA + +P + V W +L+ G V
Sbjct: 176 SSHGSDVYIGTALVDMYAKCERPEEAQKVFDAMP-ERNIVSWNSLITCYEQNGPVDEALA 234
Query: 517 EFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDR 563
F ++ D + E T VM A AGR TR DR
Sbjct: 235 LFVRMMKDGFVPDEV--TLASVMSACAGLAAGREGRQVHTRMVKSDR 279
>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Glycine max]
Length = 975
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 215/666 (32%), Positives = 334/666 (50%), Gaps = 106/666 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWN--------------------------------- 27
MYGKCG ++ A KVF+ M R+ VSWN
Sbjct: 239 MYGKCGFVESAVKVFETMRNRNLVSWNSVMYACSENGGFGECCGVFKRLLISEEEGLVPD 298
Query: 28 -----SVVTACAA-----NGLVLEAL--------ECLERMSSLD---------------- 53
+V+ ACAA G+V+ L E S +D
Sbjct: 299 VATMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEVTVNNSLVDMYSKCGYLGEARALFD 358
Query: 54 -NETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQ-AEGLEPNARTLSSVLPACARLQKLS 111
N N+VSW+ +I G+++ G +L MQ E + N T+ +VLPAC+ +L
Sbjct: 359 MNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQREEKVRVNEVTVLNVLPACSGEHQLL 418
Query: 112 LGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYC 171
KE HGY R+GF+ + V N V Y +C + C
Sbjct: 419 SLKEIHGYAFRHGFLKDELVANAFVAAYAKCSSL----------------DC-------- 454
Query: 172 ENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTS 231
A +F ME + + SWN++I + N ++ +F ++M G++P
Sbjct: 455 -------AERVFCGME----GKTVSSWNALIGAHAQNGFPGKSLDLFL-VMMDSGMDPDR 502
Query: 232 FTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDE 291
FT GS+L+ACA + LR GKEIH + GL+ D F+G +L+ +Y + ++ ++ FD+
Sbjct: 503 FTIGSLLLACARLKFLRCGKEIHGFMLRNGLELDEFIGISLMSLYIQCSSMLLGKLIFDK 562
Query: 292 IENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG 351
+EN + + GF N A+ F +MLS + P V +L ACS ++ + G
Sbjct: 563 MENKSLVCWNVMITGFSQNELPCEALDTFRQMLSGGIKPQEIAVTGVLGACSQVSALRLG 622
Query: 352 KQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMH 411
K+VH++A++ D + AL+DMYAKCG ++ ++ + R++ D N ++ Y +H
Sbjct: 623 KEVHSFALKAHLSEDAFVTCALIDMYAKCGCMEQSQNIFDRVNEKDEAVWNVIIAGYGIH 682
Query: 412 GHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKH 470
GHG + I F + G RPD +FL L AC HAG + G ++ M Y VKP L+H
Sbjct: 683 GHGLKAIELFELMQNKGGRPDSFTFLGVLIACNHAGLVTEGLKYLGQMQNLYGVKPKLEH 742
Query: 471 YTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELE 530
Y C+VD+L RAG+L EA + + ++P PDS +W +LL C ++G+LE G+ + +L+ELE
Sbjct: 743 YACVVDMLGRAGQLTEALKLVNEMPDEPDSGIWSSLLSSCRNYGDLEIGEEVSKKLLELE 802
Query: 531 PNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSH 590
PN NYV+L+NL+A G+W ++ + RQ+MK+ +HK GCSWIE +++F SD S
Sbjct: 803 PNKAENYVLLSNLYAGLGKWDEVRKVRQRMKENGLHKDAGCSWIEIGGMVYRFLVSDGSL 862
Query: 591 DRSEEI 596
S++I
Sbjct: 863 SESKKI 868
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 123/470 (26%), Positives = 200/470 (42%), Gaps = 89/470 (18%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY CGS D++ VF E+D L
Sbjct: 137 MYSACGSPSDSRGVFDAAKEKD------------------------------------LF 160
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRM-QAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
++A++ G+++N +AI + + A L P+ TL V ACA + + LG+ H
Sbjct: 161 LYNALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVADVELGEAVHAL 220
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ G S+ FV N L+ +Y +CG + SA+K+
Sbjct: 221 ALKAGGFSDAFVGNALIAMYGKCGFVESAVKV---------------------------- 252
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLM--RDGIEPTSFTFGSV 237
F+ M + R ++SWNS++ +N + E +F+ LL+ +G+ P T +V
Sbjct: 253 ---FETMRN----RNLVSWNSVMYACSENGGFGECCGVFKRLLISEEEGLVPDVATMVTV 305
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
+ ACA + +R G +H LA LG+ + V +LV+MY + L A+ FD + +N
Sbjct: 306 IPACAAVGEVRMGMVVHGLAFKLGITEEVTVNNSLVDMYSKCGYLGEARALFD-MNGGKN 364
Query: 298 LL-------GKMKEDGFEPNVYTWNAMQLFSEMLSLD-LTPDIYTVGIILSACSSLATME 349
++ G KE F +L EM + + + TV +L ACS +
Sbjct: 365 VVSWNTIIWGYSKEGDFR------GVFELLQEMQREEKVRVNEVTVLNVLPACSGEHQLL 418
Query: 350 RGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYA 409
K++H YA R G+ D + A V YAKC SL A + + + S NA++ A+A
Sbjct: 419 SLKEIHGYAFRHGFLKDELVANAFVAAYAKCSSLDCAERVFCGMEGKTVSSWNALIGAHA 478
Query: 410 MHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM 459
+G + + F ++ SG PD + S L AC ++ G E M
Sbjct: 479 QNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFM 528
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 101/411 (24%), Positives = 183/411 (44%), Gaps = 90/411 (21%)
Query: 54 NETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLG 113
N+ NL+ A G + + +EAIG+L R AC + + +G
Sbjct: 70 NDALNLLHSHAQNGTVSSSDISKEAIGILLR------------------ACGHHKNIHVG 111
Query: 114 KEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNT-IIVGYCE 172
++ H ++ + ++N+V +T II Y
Sbjct: 112 RKVHALVS-------------------------------ASHKLRNDVVLSTRIIAMYSA 140
Query: 173 NGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSF 232
G+ +++R +FD + ++ + +N+++SGY N+L+ +A S+F +LL + P +F
Sbjct: 141 CGSPSDSRGVFDAAK----EKDLFLYNALLSGYSRNALFRDAISLFLELLSATDLAPDNF 196
Query: 233 TFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI 292
T V ACA + + G+ +HALA+ G SD FVG AL+ MY + + +A F+ +
Sbjct: 197 TLPCVAKACAGVADVELGEAVHALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETM 256
Query: 293 ENIENLLGKMKEDGFEPNVYTWNAMQ--------------LFSEMLSLD---LTPDIYTV 335
N N+ +WN++ +F +L + L PD+ T+
Sbjct: 257 RN--------------RNLVSWNSVMYACSENGGFGECCGVFKRLLISEEEGLVPDVATM 302
Query: 336 GIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST 395
++ AC+++ + G VH A + G +V + +LVDMY+KCG L AR +
Sbjct: 303 VTVIPACAAVGEVRMGMVVHGLAFKLGITEEVTVNNSLVDMYSKCGYLGEARALFDMNGG 362
Query: 396 PDLVSQNAMLTAYAMHGHGK---EGIAHFRRILASGFRPDHISFLSALSAC 443
++VS N ++ Y+ G + E + +R R + ++ L+ L AC
Sbjct: 363 KNVVSWNTIIWGYSKEGDFRGVFELLQEMQR--EEKVRVNEVTVLNVLPAC 411
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 140/280 (50%), Gaps = 9/280 (3%)
Query: 234 FGSVLIACADMNSLRKGKEIHALAIAL-GLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI 292
G +L AC ++ G+++HAL A L++D + ++ MY ++ FD
Sbjct: 95 IGILLRACGHHKNIHVGRKVHALVSASHKLRNDVVLSTRIIAMYSACGSPSDSRGVFDAA 154
Query: 293 ENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLS-LDLTPDIYTVGIILSACSSLATMERG 351
+ + L G+ N +A+ LF E+LS DL PD +T+ + AC+ +A +E G
Sbjct: 155 KEKDLFLYNALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVADVELG 214
Query: 352 KQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMH 411
+ VHA A++ G SD +G AL+ MY KCG ++ A ++ + +LVS N+++ A + +
Sbjct: 215 EAVHALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYACSEN 274
Query: 412 GHGKEGIAHFRRILAS---GFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSL 468
G E F+R+L S G PD + ++ + AC G ++ G L + +
Sbjct: 275 GGFGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEV 334
Query: 469 KHYTCMVDLLSRAGELGEAYEFIK----KIPMAPDSVMWG 504
+VD+ S+ G LGEA K ++ ++++WG
Sbjct: 335 TVNNSLVDMYSKCGYLGEARALFDMNGGKNVVSWNTIIWG 374
>gi|414873128|tpg|DAA51685.1| TPA: hypothetical protein ZEAMMB73_445170 [Zea mays]
Length = 987
Score = 364 bits (935), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 198/629 (31%), Positives = 339/629 (53%), Gaps = 46/629 (7%)
Query: 6 GSLDDAKKVFKMMP--ERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWS 63
G +A+ +F +P R+ +WNS+++ A +G + +A M D VSW+
Sbjct: 262 GCFREARCLFDDIPYARRNAFTWNSLLSLYAKSGRLPDAHVVFAEMPDRD-----AVSWT 316
Query: 64 AVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRN 123
+I G ++G +A+ M +EG P+ TL++VL +CA ++ +G++ H ++ +
Sbjct: 317 IMIVGLNRSGRFWDAVKTFLDMVSEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKL 376
Query: 124 GFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELF 183
G S V N ++ +Y +CGD +A +F + +++ S N ++ Y G + A +F
Sbjct: 377 GLSSCVPVANSVLYMYGKCGDAETARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMF 436
Query: 184 DQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACAD 243
+ M V+R I+SWN++I+GY N L A F +L +EP +FT SVL ACA+
Sbjct: 437 ENM----VERSIVSWNTIIAGYNQNGLDGMALKFFSRMLSASSMEPDAFTVTSVLSACAN 492
Query: 244 MNSLRKGKEIHALAIALGLQSDTFVGGALV------------------------------ 273
+ L+ GK++H+ + G+ + + AL+
Sbjct: 493 LRMLKMGKQMHSYILRTGMPCSSQIMNALISTYAKSGSVETARRIMDQAVVADLNVISFT 552
Query: 274 ---EMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTP 330
E Y + D A+ FD + N + + G+ N AM+LF M+ + P
Sbjct: 553 ALLEGYVKLGDTKQAREIFDIMNNRDVIAWTAMIVGYHQNGQNDEAMELFRSMILIGPEP 612
Query: 331 DIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAY 390
+ +T+ +LSAC+SLA ++ GKQ+H AIR + V + A++ +YA+ GS+ AR +
Sbjct: 613 NSHTLAAVLSACASLAYLDYGKQIHCKAIRSLQEQSVSVSNAIITVYARSGSVPLARRVF 672
Query: 391 KRIS-TPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSI 449
+I + ++ +M+ A A HG G++ + F ++ G +PDHI+++ LSAC HAG +
Sbjct: 673 DQICWRKETITWTSMIVAMAQHGLGEQAVVLFEEMVRVGVKPDHITYVGVLSACAHAGFV 732
Query: 450 KTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLG 508
G +++ M + + P + HY CMVDL +RAG L EA+EFI+++P+APD+V+WG+LL
Sbjct: 733 DKGKRYYEQMQNEHGIVPQMSHYACMVDLHARAGLLTEAHEFIQRMPVAPDTVVWGSLLA 792
Query: 509 GCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKS 568
C N + ++AA +L+ ++P+N+G Y LAN+++ GRW+D AR + KD+ + K
Sbjct: 793 ACRVRKNADLAELAAGKLLSIDPHNSGAYSALANVYSACGRWNDAARIWKLRKDKGVKKE 852
Query: 569 PGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
G SW R ++H F A D H + + IY
Sbjct: 853 TGFSWTHVRGKVHVFGADDVLHPQRDSIY 881
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 137/418 (32%), Positives = 216/418 (51%), Gaps = 26/418 (6%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKCG + A+ VF+ M R SWN +V+ G + A+ E M ++V
Sbjct: 391 MYGKCGDAETARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVER-----SIV 445
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRM-QAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
SW+ +I G+ QNG D A+ RM A +EP+A T++SVL ACA L+ L +GK+ H Y
Sbjct: 446 SWNTIIAGYNQNGLDGMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSY 505
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIK--NEVSCNTIIVGYCENGNVA 177
I R G + ++N L+ Y + G + +A +I + + N +S ++ GY + G+
Sbjct: 506 ILRTGMPCSSQIMNALISTYAKSGSVETARRIMDQAVVADLNVISFTALLEGYVKLGDTK 565
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
+ARE+FD M + R +I+W +MI GY N DEA +FR +++ G EP S T +V
Sbjct: 566 QAREIFDIMNN----RDVIAWTAMIVGYHQNGQNDEAMELFRSMIL-IGPEPNSHTLAAV 620
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI----E 293
L ACA + L GK+IH AI + V A++ +Y R + A+ FD+I E
Sbjct: 621 LSACASLAYLDYGKQIHCKAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKE 680
Query: 294 NI--ENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG 351
I +++ M + G A+ LF EM+ + + PD T +LSAC+ +++G
Sbjct: 681 TITWTSMIVAMAQHGLGE-----QAVVLFEEMVRVGVKPDHITYVGVLSACAHAGFVDKG 735
Query: 352 KQVH-AYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST-PDLVSQNAMLTA 407
K+ + G + +VD++A+ G L A +R+ PD V ++L A
Sbjct: 736 KRYYEQMQNEHGIVPQMSHYACMVDLHARAGLLTEAHEFIQRMPVAPDTVVWGSLLAA 793
>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 364 bits (934), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 203/609 (33%), Positives = 334/609 (54%), Gaps = 49/609 (8%)
Query: 1 MYGKCGSLDDAKK-------VFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLD 53
M C L+D+ + + K+ + D S N++V A G++ +A + ++
Sbjct: 117 MINVCTGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAK-- 174
Query: 54 NETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLG 113
P++VSW+A+I G + Y A+ +L M G+ PN TLSS L ACA + LG
Sbjct: 175 ---PDIVSWNAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELG 231
Query: 114 KEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCEN 173
++ H + + S+ F+ GL+D+Y +C M
Sbjct: 232 RQLHSSLIKMDMGSDSFLGVGLIDMYSKCNSM---------------------------- 263
Query: 174 GNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFT 233
+AR +F M +R +I+WN++ISG+ N +EA S+F L+ +GI T
Sbjct: 264 ---DDARLVFKLMP----ERDMIAWNAVISGHSQNEEDEEAASLF-PLMHTEGIGFNQTT 315
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
+VL + A + + ++IHAL++ G + D +V +L++ Y + + A F+E
Sbjct: 316 LSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCGHVEDATRVFEESP 375
Query: 294 NIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ 353
++ +L + + A++L+ EM + PD + +L+AC+SL+ E+GKQ
Sbjct: 376 IVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACASLSAYEQGKQ 435
Query: 354 VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGH 413
VH + ++ G+ SD+ G +LV+MYAKCGS++ A A+ RI +VS +AM+ A HG+
Sbjct: 436 VHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVRGIVSWSAMIGGLAQHGY 495
Query: 414 GKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYT 472
GKE + F+++L G P+HI+ +S L AC HAG + +F+ M + ++P +HY
Sbjct: 496 GKEALQLFKQMLKVGVPPNHITLVSVLCACNHAGLVAEAKHYFNSMKILFGIEPMQEHYA 555
Query: 473 CMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPN 532
CM+DLL RAG+L A E + K+P ++++WGALLG H N++ G+ AA+ L+ LEP
Sbjct: 556 CMIDLLGRAGKLEAAMELVNKMPFQANALVWGALLGAARIHKNIDLGEQAAEMLLALEPE 615
Query: 533 NTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDR 592
+G +V+LAN++A G W +AR R+ MKD ++ K PG SW+E +D+++ F DRSH R
Sbjct: 616 KSGTHVLLANIYASVGMWDKVARVRRLMKDGKVKKEPGMSWLEVKDKVYTFIVGDRSHSR 675
Query: 593 SEEIYTIID 601
S EIY +D
Sbjct: 676 STEIYAKLD 684
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 131/470 (27%), Positives = 215/470 (45%), Gaps = 70/470 (14%)
Query: 85 MQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGD 144
M G++ N SVL AC + L LGK+ HG + GF S+ FV N LV +Y +C
Sbjct: 1 MHLLGIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKC-- 58
Query: 145 MLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISG 204
G +AR LFD + R ++SWN++ S
Sbjct: 59 -----------------------------GGFGDARSLFDAIP----DRSVVSWNALFSC 85
Query: 205 YVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQS 264
YV + ++ EA S+F D+++ GI P F+ S++ C + +G++IH I LG S
Sbjct: 86 YVHSDMHGEAVSLFHDMVL-SGIRPNEFSLSSMINVCTGLEDSVQGRKIHGYLIKLGYDS 144
Query: 265 DTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEML 324
D F ALV+MY + L A FDEI + + G + Y A++L EM
Sbjct: 145 DAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIAGCVLHEYHHRALELLREMN 204
Query: 325 SLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLK 384
+ P+++T+ L AC+ +A E G+Q+H+ I+ SD +G L+DMY+KC S+
Sbjct: 205 KSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMGSDSFLGVGLIDMYSKCNSMD 264
Query: 385 HARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSAC- 443
ARL +K + D+++ NA+++ ++ + +E + F + G + + + L +
Sbjct: 265 DARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPLMHTEGIGFNQTTLSTVLKSIA 324
Query: 444 ----------VHAGSIKTGSEF------------------FDLMAYYDVKP--SLKHYTC 473
+HA S+K+G EF D ++ P L +T
Sbjct: 325 ALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCGHVEDATRVFEESPIVDLVLFTS 384
Query: 474 MVDLLSRAGELGEA---YEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQ 520
+V ++ G+ EA Y ++ + PDS + +LL C S E G+
Sbjct: 385 LVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACASLSAYEQGK 434
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 106/234 (45%), Gaps = 15/234 (6%)
Query: 338 ILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPD 397
+L AC+ + GKQVH + G+DSD + +LV +YAKCG AR + I
Sbjct: 16 VLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDARSLFDAIPDRS 75
Query: 398 LVSQNAMLTAYA---MHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSE 454
+VS NA+ + Y MHG E ++ F ++ SG RP+ S S ++ C G +
Sbjct: 76 VVSWNALFSCYVHSDMHG---EAVSLFHDMVLSGIRPNEFSLSSMINVCTGLEDSVQGRK 132
Query: 455 FFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
+ +VD+ ++ G L +A +I PD V W A++ GCV H
Sbjct: 133 IHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIA-KPDIVSWNAIIAGCVLH- 190
Query: 515 NLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKS 568
E+ A + L E+ N +G M N+F + A + R++H S
Sbjct: 191 --EYHHRALELLREM--NKSG---MCPNMFTLSSALKACAGMALRELGRQLHSS 237
>gi|225456713|ref|XP_002267998.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 618
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 185/538 (34%), Positives = 312/538 (57%), Gaps = 8/538 (1%)
Query: 66 IGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGF 125
I +++ + EA+ M + T+ + +CA L + +GK+ H + R GF
Sbjct: 68 ITAYSRLSLNNEALRTFVSMHQNNVRIVCFTIPPIFKSCASLLAIDVGKQVHSLVIRYGF 127
Query: 126 MSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQ 185
S+ F N L++ Y + D+ SA IF +K+ ++ N +I Y +G V ARELFD+
Sbjct: 128 HSSVFCQNALINFYAKINDLGSAELIFDGILVKDTIAYNCLISAYSRSGEVLAARELFDK 187
Query: 186 MEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGI-EPTSFTFGSVLIACADM 244
M R I+SWN+MIS Y N Y + + +F+ M+D + EP T +VL CA +
Sbjct: 188 MR----DRSIVSWNAMISCYAQNGDYHKGWIIFQR--MQDEMCEPNEITLATVLSICAKL 241
Query: 245 NSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKE 304
L G I L L S+ V A++EMY + + ++ FD + + +
Sbjct: 242 GDLEMGLRIKKLNDNKNLGSNMIVSTAMLEMYVKCGAVDDGRLVFDHMARRDVVTWSAMI 301
Query: 305 DGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYD 364
G+ N + A++LF M S + P+ T+ +LSAC+ L ++E G+++ +Y G
Sbjct: 302 AGYAQNGRSNEALELFENMKSAQIKPNDVTLVSVLSACAQLGSVETGERIGSYVESRGLI 361
Query: 365 SDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRI 424
S+V++ +AL+ MY+KCG++ AR + ++ D V+ N+M+ A++G ++ IA + R+
Sbjct: 362 SNVYVASALLGMYSKCGNIIKARQIFDKLPQRDNVTWNSMIMGLAINGFAEDAIALYNRM 421
Query: 425 LASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMVDLLSRAGE 483
+P++I+F+ ++AC HAG ++ G EFF M + +++ P+++H+ C+VDL R+G
Sbjct: 422 KEIEVKPNNITFVGLMTACTHAGHVELGLEFFRSMRSDHNISPNIEHFACIVDLFCRSGR 481
Query: 484 LGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANL 543
L +AYEFI ++ + P+ V+WG LL H N+E ++A +L+ELEP+N+GNYV+L+N+
Sbjct: 482 LIDAYEFICRMEVEPNVVIWGTLLSASRIHLNVELAELAGKKLLELEPDNSGNYVILSNI 541
Query: 544 FAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
+A AGRW + + R+ MKD+R+ K+ SW+E D +HKF D SH RS+E+Y+ ID
Sbjct: 542 YASAGRWQEALKVRKLMKDKRVQKAAAYSWVEVEDRVHKFLVGDTSHPRSDEVYSTID 599
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 105/413 (25%), Positives = 194/413 (46%), Gaps = 45/413 (10%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y K L A+ +F + +D +++N +++A + +G VL A E ++M ++VS
Sbjct: 141 YAKINDLGSAELIFDGILVKDTIAYNCLISAYSRSGEVLAARELFDKM-----RDRSIVS 195
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W+A+I + QNG + + RMQ E EPN TL++VL CA+L L +G
Sbjct: 196 WNAMISCYAQNGDYHKGWIIFQRMQDEMCEPNEITLATVLSICAKLGDLEMGLRIKKLND 255
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
SN V ++++Y +CG + +F + ++ V+ + +I GY +NG EA E
Sbjct: 256 NKNLGSNMIVSTAMLEMYVKCGAVDDGRLVFDHMARRDVVTWSAMIAGYAQNGRSNEALE 315
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
LF+ M+ I+P T SVL AC
Sbjct: 316 LFENMK------------------------------------SAQIKPNDVTLVSVLSAC 339
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK 301
A + S+ G+ I + + GL S+ +V AL+ MY + +++ A+ FD++ +N+
Sbjct: 340 AQLGSVETGERIGSYVESRGLISNVYVASALLGMYSKCGNIIKARQIFDKLPQRDNVTWN 399
Query: 302 MKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRC 361
G N + +A+ L++ M +++ P+ T +++AC+ +E G + ++R
Sbjct: 400 SMIMGLAINGFAEDAIALYNRMKEIEVKPNNITFVGLMTACTHAGHVELGLEFFR-SMRS 458
Query: 362 GYDSDVHIG--TALVDMYAKCGSLKHARLAYKRIST-PDLVSQNAMLTAYAMH 411
++ +I +VD++ + G L A R+ P++V +L+A +H
Sbjct: 459 DHNISPNIEHFACIVDLFCRSGRLIDAYEFICRMEVEPNVVIWGTLLSASRIH 511
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 114/238 (47%), Gaps = 36/238 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG++DD + VF M RD +V
Sbjct: 272 MYVKCGAVDDGRLVFDHMARRD------------------------------------VV 295
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+WSA+I G+ QNG EA+ + M++ ++PN TL SVL ACA+L + G+ Y+
Sbjct: 296 TWSAMIAGYAQNGRSNEALELFENMKSAQIKPNDVTLVSVLSACAQLGSVETGERIGSYV 355
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
G +SN +V + L+ +Y +CG+++ A +IF K ++ V+ N++I+G NG +A
Sbjct: 356 ESRGLISNVYVASALLGMYSKCGNIIKARQIFDKLPQRDNVTWNSMIMGLAINGFAEDAI 415
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
L+++M+ + V+ I++ +++ + FR + I P F ++
Sbjct: 416 ALYNRMKEIEVKPNNITFVGLMTACTHAGHVELGLEFFRSMRSDHNISPNIEHFACIV 473
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 62/117 (52%), Gaps = 2/117 (1%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG++ A+++F +P+RD V+WNS++ A NG +A+ RM ++ + PN +
Sbjct: 373 MYSKCGNIIKARQIFDKLPQRDNVTWNSMIMGLAINGFAEDAIALYNRMKEIEVK-PNNI 431
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEF 116
++ ++ T G+ E + M+++ + PN + ++ R +L EF
Sbjct: 432 TFVGLMTACTHAGHVELGLEFFRSMRSDHNISPNIEHFACIVDLFCRSGRLIDAYEF 488
>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
Length = 989
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 196/626 (31%), Positives = 340/626 (54%), Gaps = 67/626 (10%)
Query: 6 GSLDDAKKVFKMMPERDCVSWNSVVTACAANG--------------------LVLEA--- 42
G+L+ K+ + + DCV+ S+++ACA+NG +++E
Sbjct: 297 GALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALL 356
Query: 43 ---LECLERMSS----LDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNAR 95
+ C + ++ L +T N+V W+ ++ F + E+ + +MQ +GL PN
Sbjct: 357 DLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQF 416
Query: 96 TLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKF 155
T S+L C + L LG++ H + + GF N +V + L+D+Y + G + +A I
Sbjct: 417 TYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTL 476
Query: 156 SIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAF 215
+ + ++SW ++ISGY ++L+ EA
Sbjct: 477 T-----------------------------------EDDVVSWTALISGYAQHNLFAEAL 501
Query: 216 SMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEM 275
F+++L R GI+ + F S + ACA + +L +G++IHA + G D +G ALV +
Sbjct: 502 KHFKEMLNR-GIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIGNALVSL 560
Query: 276 YCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTV 335
Y R + A + F++I+ +++ GF + Y +A+++F++M L +T
Sbjct: 561 YARCGRIKEAYLEFEKIDAKDSISWNGLISGFAQSGYCEDALKVFAQMNRAKLEASFFTF 620
Query: 336 GIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST 395
G +SA +++A +++GKQ+HA I+ G+DSD+ + AL+ YAKCGS++ AR + +
Sbjct: 621 GSAVSAAANIANIKQGKQIHAMIIKRGFDSDIEVSNALITFYAKCGSIEDARREFCEMPE 680
Query: 396 PDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEF 455
+ VS NAM+T Y+ HG+G E + F ++ G P+H++F+ LSAC H G + G +
Sbjct: 681 KNDVSWNAMITGYSQHGYGNEAVNLFEKMKQVGEMPNHVTFVGVLSACSHVGLVTKGLGY 740
Query: 456 FDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
F+ M+ + + P HY C+VDL+SRAG L A +FI+++P+ PD+ +W LL C H
Sbjct: 741 FESMSKEHGLVPKPAHYACVVDLISRAGFLSRARKFIEEMPIEPDATIWRTLLSACTVHK 800
Query: 515 NLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWI 574
N+E G+ AA L+ELEP ++ YV+L+N++A +G+W +TRQ M++R + K PG SWI
Sbjct: 801 NVEVGEFAAQHLLELEPEDSATYVLLSNMYAVSGKWDCRDQTRQMMRNRGVKKEPGRSWI 860
Query: 575 EDRDEIHKFRASDRSHDRSEEIYTII 600
E ++ +H F DR H +++IY +
Sbjct: 861 EVKNSVHAFYVGDRLHPLADKIYEFL 886
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 147/517 (28%), Positives = 237/517 (45%), Gaps = 73/517 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y K G + A+KVF + +D VSW ++++
Sbjct: 156 LYAKNGLIISARKVFDNLCTKDSVSWVAMIS----------------------------- 186
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
GF+QNGY+EEAI + M G+ P SSVL C +++ +G++ H +
Sbjct: 187 -------GFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALV 239
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G +V N LV +Y R + +SA K+FSK K+EVS N++I G + G A
Sbjct: 240 FKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGAL 299
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
ELF +M+ RD ++P T S+L A
Sbjct: 300 ELFTKMK------------------------------------RDYLKPDCVTVASLLSA 323
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA +L KG+++H+ I G+ SD V GAL+++Y D+ A F + +L
Sbjct: 324 CASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLW 383
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
+ F + ++F +M L P+ +T IL C+S+ ++ G+Q+H I+
Sbjct: 384 NVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIK 443
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
G+ +V++ + L+DMYAK G L A + + ++ D+VS A+++ YA H E + H
Sbjct: 444 TGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALKH 503
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSR 480
F+ +L G + D+I F SA+SAC ++ G + L +V L +R
Sbjct: 504 FKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIGNALVSLYAR 563
Query: 481 AGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
G + EAY +KI A DS+ W L+ G G E
Sbjct: 564 CGRIKEAYLEFEKID-AKDSISWNGLISGFAQSGYCE 599
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 132/515 (25%), Positives = 237/515 (46%), Gaps = 51/515 (9%)
Query: 6 GSLDDAKK----VFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPN--L 59
GSL + KK + K+ + V N +V A G + ++ E M PN +
Sbjct: 24 GSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGDLDGVVKVFEDM-------PNRSV 76
Query: 60 VSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQ-KLSLGKEFHG 118
SW +I GF + + + M E + P + +SVL AC+ + + ++ H
Sbjct: 77 RSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRACSGHRIGIRYAEQIHA 136
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
I +G + +P + N L+ +Y + NG +
Sbjct: 137 RIICHGLLCSPIISNPLIGLYAK-------------------------------NGLIIS 165
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
AR++FD + + +SW +MISG+ N +EA +F ++ GI PT + F SVL
Sbjct: 166 ARKVFDNL----CTKDSVSWVAMISGFSQNGYEEEAIHLFCEM-HTAGIFPTPYVFSSVL 220
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
C + G+++HAL G +T+V ALV +Y R + V+A+ F ++++ + +
Sbjct: 221 SGCTKIKLFDVGEQLHALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEV 280
Query: 299 LGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYA 358
G ++ A++LF++M L PD TV +LSAC+S + +G+Q+H+Y
Sbjct: 281 SFNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYV 340
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGI 418
I+ G SD+ + AL+D+Y C +K A + T ++V N ML A+ + E
Sbjct: 341 IKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESF 400
Query: 419 AHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLL 478
FR++ G P+ ++ S L C G++ G + + + ++ + ++D+
Sbjct: 401 RIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMY 460
Query: 479 SRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSH 513
++ G+L A+ ++ + D V W AL+ G H
Sbjct: 461 AKHGKLDTAHVILRTLT-EDDVVSWTALISGYAQH 494
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/419 (24%), Positives = 176/419 (42%), Gaps = 74/419 (17%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G LD A + + + E D VSW ++++ A + L EAL+ + M +
Sbjct: 459 MYAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLN--------- 509
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
G++ + SS + ACA +Q L+ G++ H
Sbjct: 510 ---------------------------RGIQSDNIGFSSAISACAGIQALNQGRQIHAQS 542
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+G+ + + N LV +Y RCG + A F K K+ +S N +I G+ ++G +A
Sbjct: 543 YVSGYSEDLSIGNALVSLYARCGRIKEAYLEFEKIDAKDSISWNGLISGFAQSGYCEDAL 602
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
++F QM R +E + FTFGS + A
Sbjct: 603 KVFAQMN------------------------------------RAKLEASFFTFGSAVSA 626
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
A++ ++++GK+IHA+ I G SD V AL+ Y + + A+ F E+ ++
Sbjct: 627 AANIANIKQGKQIHAMIIKRGFDSDIEVSNALITFYAKCGSIEDARREFCEMPEKNDVSW 686
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG-KQVHAYAI 359
G+ + Y A+ LF +M + P+ T +LSACS + + +G + +
Sbjct: 687 NAMITGYSQHGYGNEAVNLFEKMKQVGEMPNHVTFVGVLSACSHVGLVTKGLGYFESMSK 746
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST-PDLVSQNAMLTAYAMHGHGKEG 417
G +VD+ ++ G L AR + + PD +L+A +H + + G
Sbjct: 747 EHGLVPKPAHYACVVDLISRAGFLSRARKFIEEMPIEPDATIWRTLLSACTVHKNVEVG 805
>gi|359480463|ref|XP_003632466.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like, partial [Vitis vinifera]
Length = 621
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 190/510 (37%), Positives = 292/510 (57%), Gaps = 5/510 (0%)
Query: 92 PNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKI 151
P+A T S++L C +L+ L G + H + +GF+ + N ++D+Y +C +++A ++
Sbjct: 87 PSAATYSTLLQLCLQLRALDEGMKVHAHTKTSGFVPGVVISNRILDMYIKCNSLVNAKRL 146
Query: 152 FSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLY 211
F + + ++ S N +I GY + G + EAR+LFDQM +R SW +M SGYV + +
Sbjct: 147 FDEMAERDLCSWNIMISGYAKAGRLQEARKLFDQM----TERDNFSWTAMTSGYVRHDQH 202
Query: 212 DEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGA 271
+EA +FR + + + FT S L A A + SL GKEIH + +GL D V A
Sbjct: 203 EEALELFRAMQRHENFKCNKFTMSSALAASAAIQSLHLGKEIHGHILRIGLDLDGVVWSA 262
Query: 272 LVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPD 331
L +MY + + A+ FD+ + + + D + LFS++L + P+
Sbjct: 263 LSDMYGKCGSIGEARHIFDKTVDRDVVSWTAMIDRYFKEGRREEGFALFSDLLKSGIWPN 322
Query: 332 IYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYK 391
+T +L+AC+ A E GKQVH Y R G+D + LV MY KCG++K+AR +
Sbjct: 323 EFTFSGVLNACADHAAEELGKQVHGYMTRIGFDPSSFAASTLVHMYTKCGNIKNARRVFN 382
Query: 392 RISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKT 451
+ PDLVS ++++ YA +G E + F +L SG +PDHI+F+ LSAC HAG +
Sbjct: 383 GMPRPDLVSWTSLISGYAQNGQPDEALQFFELLLKSGTQPDHITFVGVLSACTHAGLVDK 442
Query: 452 GSEFFD-LMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGC 510
G E+FD + + + + HY C++DLLSR+G L EA + I K+P+ PD +W +LLGGC
Sbjct: 443 GLEYFDSIKEKHGLTHTADHYACLIDLLSRSGRLQEAEDIIDKMPIEPDKFLWASLLGGC 502
Query: 511 VSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPG 570
HGNL+ + AA+ L E+EP N Y LAN++A AG W +A R+ M R + K PG
Sbjct: 503 RIHGNLKLAKRAAEALFEIEPENPATYTTLANIYATAGLWGGVAEVRKVMDARGVVKKPG 562
Query: 571 CSWIEDRDEIHKFRASDRSHDRSEEIYTII 600
SWIE + E+H F D SH +S+EI+ +
Sbjct: 563 LSWIEIKREVHVFLVGDTSHAKSKEIHEFL 592
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 121/418 (28%), Positives = 191/418 (45%), Gaps = 44/418 (10%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC SL +AK++F M ERD SWN +++ A G + EA + ++M+ DN
Sbjct: 133 MYIKCNSLVNAKRLFDEMAERDLCSWNIMISGYAKAGRLQEARKLFDQMTERDN-----F 187
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQA-EGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
SW+A+ G+ ++ EEA+ + MQ E + N T+SS L A A +Q L LGKE HG+
Sbjct: 188 SWTAMTSGYVRHDQHEEALELFRAMQRHENFKCNKFTMSSALAASAAIQSLHLGKEIHGH 247
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
I R G + V + L D+Y +CG + A IF K ++ VS +I Y + G
Sbjct: 248 ILRIGLDLDGVVWSALSDMYGKCGSIGEARHIFDKTVDRDVVSWTAMIDRYFKEGR---- 303
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
+E F++F DLL + GI P FTF VL
Sbjct: 304 -------------------------------REEGFALFSDLL-KSGIWPNEFTFSGVLN 331
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
ACAD + GK++H +G +F LV MY + ++ A+ F+ + + +
Sbjct: 332 ACADHAAEELGKQVHGYMTRIGFDPSSFAASTLVHMYTKCGNIKNARRVFNGMPRPDLVS 391
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ-VHAYA 358
G+ N A+Q F +L PD T +LSAC+ +++G + +
Sbjct: 392 WTSLISGYAQNGQPDEALQFFELLLKSGTQPDHITFVGVLSACTHAGLVDKGLEYFDSIK 451
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST-PDLVSQNAMLTAYAMHGHGK 415
+ G L+D+ ++ G L+ A ++ PD ++L +HG+ K
Sbjct: 452 EKHGLTHTADHYACLIDLLSRSGRLQEAEDIIDKMPIEPDKFLWASLLGGCRIHGNLK 509
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 136/296 (45%), Gaps = 39/296 (13%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKCGS+ +A+ +F +RD +V
Sbjct: 266 MYGKCGSIGEARHIFDKTVDRD------------------------------------VV 289
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A+I + + G EE + + G+ PN T S VL ACA LGK+ HGY+
Sbjct: 290 SWTAMIDRYFKEGRREEGFALFSDLLKSGIWPNEFTFSGVLNACADHAAEELGKQVHGYM 349
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
TR GF + F + LV +Y +CG++ +A ++F+ + VS ++I GY +NG EA
Sbjct: 350 TRIGFDPSSFAASTLVHMYTKCGNIKNARRVFNGMPRPDLVSWTSLISGYAQNGQPDEAL 409
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+ F+ + G Q I++ ++S L D+ F + + G+ T+ + ++
Sbjct: 410 QFFELLLKSGTQPDHITFVGVLSACTHAGLVDKGLEYFDSIKEKHGLTHTADHYACLIDL 469
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
+ L++ ++I + ++ D F+ +L+ + +L A+ A + + IE
Sbjct: 470 LSRSGRLQEAEDI---IDKMPIEPDKFLWASLLGGCRIHGNLKLAKRAAEALFEIE 522
>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 810
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 199/572 (34%), Positives = 306/572 (53%), Gaps = 43/572 (7%)
Query: 27 NSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQ 86
NS+V + G + EA ++ N N VSW+ +IGG GY EA + MQ
Sbjct: 173 NSLVDMYSKCGYLTEAQMLFDK-----NNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQ 227
Query: 87 -AEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDM 145
E +E N T+ ++LPAC + +L KE HGY R+GF + V NG V Y +CG +
Sbjct: 228 MQEDIEVNEVTVLNILPACLEISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGML 287
Query: 146 LSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGY 205
+ A ++F K S N +I G +NG+ +A L+ QM +
Sbjct: 288 ICAERVFYSMETKTVNSWNALIGGCAQNGDPRKALNLYIQMTY----------------- 330
Query: 206 VDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSD 265
G+ P FT GS+L+A A + SLR GKE+H + GL+ D
Sbjct: 331 -------------------SGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLEID 371
Query: 266 TFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLS 325
+F+G +L+ +Y + +A++ FD +E ++ G+ N +A+ LF +++S
Sbjct: 372 SFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKLVS 431
Query: 326 LDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKH 385
P V +L ACS + + GK+ H YA++ DV + + +DMYAK G +K
Sbjct: 432 DGFQPSDIAVVSVLGACSQQSALRLGKETHCYALKALLMEDVFVACSTIDMYAKSGCIKE 491
Query: 386 ARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVH 445
+R + + DL S NA++ AY +HG G+E I F R+ G PD +F+ L+ C H
Sbjct: 492 SRSVFDGLKNKDLASWNAIIAAYGVHGDGEESIELFERMRKVGQMPDGFTFIGILTVCSH 551
Query: 446 AGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWG 504
AG ++ G ++F+ M ++ ++P L+HY C++D+L RAG L +A + ++P PDS +W
Sbjct: 552 AGLVEEGLKYFNEMQNFHGIEPKLEHYACVMDMLGRAGRLDDALRLVHEMPEQPDSRVWS 611
Query: 505 ALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRR 564
+LL C + G LE GQI A++L+ELEP N NYV L+NL+A +GRW D+ R RQ +KD
Sbjct: 612 SLLSFCRNFGELEIGQIVAEKLLELEPKNVENYVSLSNLYAGSGRWDDVRRVRQMIKDIG 671
Query: 565 MHKSPGCSWIEDRDEIHKFRASDRSHDRSEEI 596
+ K GCSWIE ++H F A D +S+E+
Sbjct: 672 LQKDAGCSWIELGGKVHSFVAGDNLLPQSKEM 703
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 155/528 (29%), Positives = 246/528 (46%), Gaps = 92/528 (17%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGK G +D A KVF MP R NLV
Sbjct: 75 MYGKFGFVDAAVKVFHYMPVR------------------------------------NLV 98
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQA--EGLEPNARTLSSVLPACARLQKLSLGKEFHG 118
SW+++I GF++NG+ ++ ML M A EGL P+ TL +VLP CAR + +G HG
Sbjct: 99 SWNSIISGFSENGFSKDCFDMLVEMMAGEEGLLPDIATLVTVLPVCAREVDVQMGIRIHG 158
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
+ G + V N LVD+Y +CG + A +F K + KN VS NT+I G C G + E
Sbjct: 159 LAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFDKNNRKNAVSWNTMIGGLCTKGYIFE 218
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
A F++FR++ M++ IE T ++L
Sbjct: 219 A-----------------------------------FNLFREMQMQEDIEVNEVTVLNIL 243
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE----- 293
AC +++ LR KE+H +I G Q D V V Y + L+ A+ F +E
Sbjct: 244 PACLEISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVN 303
Query: 294 NIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ 353
+ L+G ++G +P A+ L+ +M L PD +T+G +L A + L ++ GK+
Sbjct: 304 SWNALIGGCAQNG-DPR----KALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKE 358
Query: 354 VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGH 413
VH + +R G + D IG +L+ +Y CG ARL + + VS NAM++ Y+ +G
Sbjct: 359 VHGFVLRHGLEIDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNGL 418
Query: 414 GKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKH--- 470
++ + FR++++ GF+P I+ +S L AC +++ G E Y +K L
Sbjct: 419 PEDALILFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKE----THCYALKALLMEDVF 474
Query: 471 YTC-MVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
C +D+ +++G + E+ + D W A++ HG+ E
Sbjct: 475 VACSTIDMYAKSGCIKESRSVFDGLK-NKDLASWNAIIAAYGVHGDGE 521
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 150/324 (46%), Gaps = 30/324 (9%)
Query: 208 NSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTF 267
N LY +A MF L+ +FTF V+ AC G+ IH + I +GL D F
Sbjct: 8 NELYSDAIDMFVKLITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDVF 67
Query: 268 VGGALVEMYCRYQDLVAAQMAFDEIENIENLLG-KMKEDGFEPNVYTWNAMQLFSEMLSL 326
VG AL+ MY ++ + AA F + + NL+ GF N ++ + + EM++
Sbjct: 68 VGNALIAMYGKFGFVDAAVKVFHYMP-VRNLVSWNSIISGFSENGFSKDCFDMLVEMMAG 126
Query: 327 D--LTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLK 384
+ L PDI T+ +L C+ ++ G ++H A++ G DV + +LVDMY+KCG L
Sbjct: 127 EEGLLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLT 186
Query: 385 HARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRI-LASGFRPDHISFLSALSAC 443
A++ + + + + VS N M+ G+ E FR + + + ++ L+ L AC
Sbjct: 187 EAQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPAC 246
Query: 444 -----------VHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIK 492
+H SI+ G ++ +L+A V ++ G L A
Sbjct: 247 LEISQLRSLKELHGYSIRHGFQYDELVA-----------NGFVAAYAKCGMLICAERVF- 294
Query: 493 KIPMAPDSV-MWGALLGGCVSHGN 515
M +V W AL+GGC +G+
Sbjct: 295 -YSMETKTVNSWNALIGGCAQNGD 317
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 135/306 (44%), Gaps = 52/306 (16%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y CG A+ +F M E+ VSWN++++ + NGL +AL
Sbjct: 381 LYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDAL----------------- 423
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFR-MQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
+LFR + ++G +P+ + SVL AC++ L LGKE H Y
Sbjct: 424 --------------------ILFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKETHCY 463
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ M + FV +D+Y + G + + +F K+ S N II Y +G+ E+
Sbjct: 464 ALKALLMEDVFVACSTIDMYAKSGCIKESRSVFDGLKNKDLASWNAIIAAYGVHGDGEES 523
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
ELF++M +G ++ +++ L +E F ++ GIEP + V+
Sbjct: 524 IELFERMRKVGQMPDGFTFIGILTVCSHAGLVEEGLKYFNEMQNFHGIEPKLEHYACVM- 582
Query: 240 ACADMNSLRKGKEIHALAIA--LGLQSDTFVGGALVEMYCR------YQDLVAAQMAFDE 291
DM R G+ AL + + Q D+ V +L+ +CR +VA ++ E
Sbjct: 583 ---DMLG-RAGRLDDALRLVHEMPEQPDSRVWSSLLS-FCRNFGELEIGQIVAEKLLELE 637
Query: 292 IENIEN 297
+N+EN
Sbjct: 638 PKNVEN 643
>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 908
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 198/575 (34%), Positives = 319/575 (55%), Gaps = 43/575 (7%)
Query: 27 NSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQ 86
NS++ A G V A + +S P++VSW+++I G NG+ + + +M
Sbjct: 234 NSLIAAYFKFGGVESAHNLFDELSE-----PDVVSWNSMINGCVVNGFSGNGLEIFIQML 288
Query: 87 AEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDML 146
G+E + TL SVL ACA + LSLG+ HG+ + F N L+D+Y +CG++
Sbjct: 289 ILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNL- 347
Query: 147 SALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYV 206
NG A E+F +M I+SW S+I+ YV
Sbjct: 348 --------------------------NG----ATEVFVKMG----DTTIVSWTSIIAAYV 373
Query: 207 DNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDT 266
LY +A +F D + G+ P +T S++ ACA +SL KG+++H+ I G+ S+
Sbjct: 374 REGLYSDAIGLF-DEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNL 432
Query: 267 FVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSL 326
V AL+ MY + + A++ F +I + + G+ N+ A++LF +M
Sbjct: 433 PVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDMQK- 491
Query: 327 DLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHA 386
PD T+ +L AC+ LA +++G+++H + +R GY SD+H+ ALVDMYAKCG L A
Sbjct: 492 QFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLA 551
Query: 387 RLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHA 446
+L + I DL+S M+ Y MHG G E I+ F + +G PD SF + L+AC H+
Sbjct: 552 QLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSAILNACSHS 611
Query: 447 GSIKTGSEFFDLMAYY-DVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGA 505
G + G +FF+ M V+P L+HY C+VDLL+R G L +AY+FI+ +P+ PD+ +WG
Sbjct: 612 GLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGV 671
Query: 506 LLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRM 565
LL GC H +++ + A+ + ELEP+NT YV+LAN++A A +W ++ + R++M+ R
Sbjct: 672 LLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGF 731
Query: 566 HKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTII 600
++PGCSWIE + + F A + H ++++I ++
Sbjct: 732 KQNPGCSWIEVGGKFNIFVAGNSKHPQAKKIDVLL 766
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 150/608 (24%), Positives = 256/608 (42%), Gaps = 100/608 (16%)
Query: 14 VFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV-SWSAVIGGFTQN 72
+F P R C+ ++V + S N T ++ + +A I F +
Sbjct: 32 IFFKQPRRTCLLHSTVCVS-----------------PSFTNTTHSVTQNQNAKINKFCEM 74
Query: 73 GYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVV 132
G AI +L + ++ L N + SVL CA + L GK H I NG + +
Sbjct: 75 GDLRNAIELLTKSKSYELGLN--SYCSVLQLCAEKKSLEDGKRVHSVIISNGISVDEALG 132
Query: 133 NGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQ 192
LV +Y CGD++ KIF K N ++ Y + GN E+ LF +M+ LGV
Sbjct: 133 AKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVV 192
Query: 193 RGIISW-----------------------------------NSMISGYVDNSLYDEAFSM 217
++ NS+I+ Y + A ++
Sbjct: 193 GNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNL 252
Query: 218 FRDLLMRD------------------------------GIEPTSFTFGSVLIACADMNSL 247
F +L D G+E T SVL+ACA++ +L
Sbjct: 253 FDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNL 312
Query: 248 RKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDL-----VAAQMAFDEIENIENLLGKM 302
G+ +H + + L++MY + +L V +M I + +++
Sbjct: 313 SLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAY 372
Query: 303 KEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCG 362
+G +Y+ +A+ LF EM S + PDIYTV I+ AC+ +++++G+ VH+Y I+ G
Sbjct: 373 VREG----LYS-DAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNG 427
Query: 363 YDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFR 422
S++ + AL++MYAKCGS++ ARL + +I D+VS N M+ Y+ + E + F
Sbjct: 428 MGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFL 487
Query: 423 RILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAG 482
+ F+PD I+ L AC ++ G E + L +VD+ ++ G
Sbjct: 488 D-MQKQFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCG 546
Query: 483 ELGEAYEFIKKIPMAPDSVMWGALLGGCVSH--GNLEFGQIAADRLIELEPNNTGNYVML 540
L A IP D + W ++ G H GN R+ +EP+ + ++ +
Sbjct: 547 LLVLAQLLFDMIP-KKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDES-SFSAI 604
Query: 541 ANLFAYAG 548
N +++G
Sbjct: 605 LNACSHSG 612
>gi|12957718|gb|AAK09236.1|AC084320_23 hypothetical protein [Oryza sativa Japonica Group]
gi|108711388|gb|ABF99183.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 843
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 203/598 (33%), Positives = 314/598 (52%), Gaps = 73/598 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC LDD K+F +MP D LV
Sbjct: 291 MYAKCKCLDDGWKLFGLMPRDD------------------------------------LV 314
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+ +I G QNG+ ++A+ + MQ G+ P++ TL S+LPA L + GKE HGYI
Sbjct: 315 TWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYI 374
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
RN + F+V+ LVD+Y +C V A+
Sbjct: 375 VRNCVHMDVFLVSALVDIYFKCR-------------------------------AVRMAQ 403
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
++D + + V G ++MISGYV N + EA MFR LL GI P + SVL A
Sbjct: 404 SVYDSSKAIDVVIG----STMISGYVLNGMSQEAVKMFRYLL-EQGIRPNAVAIASVLPA 458
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA M +++ G+E+H+ A+ + +V AL++MY + L + F +I + +
Sbjct: 459 CASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTW 518
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
F N A+ LF EM + T+ +LSAC+SL + GK++H I+
Sbjct: 519 NSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIK 578
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
+D+ +AL+DMY KCG+L+ A ++ + + VS N+++ +Y +G KE ++
Sbjct: 579 GPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLVKESVSL 638
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLLS 479
R + GF+ DH++FL+ +SAC HAG ++ G F M Y + P ++H+ CMVDL S
Sbjct: 639 LRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFACMVDLYS 698
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
RAG+L +A E I +P PD+ +WGALL C H N+E +IA+ L +L+P+N+G YV+
Sbjct: 699 RAGKLDKAMELIVDMPFKPDAGIWGALLHACRVHRNVELAEIASQELFKLDPHNSGYYVL 758
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
++N+ A AGRW +++ R+ MKD ++ K PG SW++ + H F A+D+SH SE+IY
Sbjct: 759 MSNINAVAGRWDGVSKVRRLMKDTKVQKIPGYSWVDVNNTSHLFVAADKSHPDSEDIY 816
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 135/514 (26%), Positives = 237/514 (46%), Gaps = 73/514 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY G L DA++VF M ERDCV
Sbjct: 190 MYANGGLLWDARQVFDGMAERDCVL----------------------------------- 214
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
W+ ++ G+ + G A+ + M+A G EPN TL+ L A L G + H
Sbjct: 215 -WNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLA 273
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G S V N LV +Y +C + K+F
Sbjct: 274 VKYGLESEVAVANTLVSMYAKCKCLDDGWKLFG--------------------------- 306
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
L + +++WN MISG V N D+A +F D+ + GI P S T S+L A
Sbjct: 307 --------LMPRDDLVTWNGMISGCVQNGFVDQALLLFCDM-QKSGIRPDSVTLVSLLPA 357
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
D+N +GKE+H + + D F+ ALV++Y + + + AQ +D + I+ ++G
Sbjct: 358 LTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIG 417
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G+ N + A+++F +L + P+ + +L AC+S+A M+ G+++H+YA++
Sbjct: 418 STMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALK 477
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
Y+ ++ +AL+DMYAKCG L + + +IS D V+ N+M++++A +G +E +
Sbjct: 478 NAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNL 537
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSR 480
FR + G + +++ S LSAC +I G E ++ ++ L + ++D+ +
Sbjct: 538 FREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIKGPIRADLFAESALIDMYGK 597
Query: 481 AGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
G L A+ + +P + V W +++ ++G
Sbjct: 598 CGNLEWAHRVFESMP-EKNEVSWNSIIASYGAYG 630
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 90/227 (39%), Gaps = 19/227 (8%)
Query: 338 ILSACSSLATMERGKQVHAYAIRCG-YDSDVHIGTALVDMYAKCGSLKHARLAYK---RI 393
+L C S + + G QVH A+ G + +D + T LV MY + A + R
Sbjct: 45 VLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSLPRG 104
Query: 394 STPDLVSQNAMLTAYAMHGHGKEGIAHFRRILA--SGFRPDHISFLSALSACVHAGSIKT 451
+ + N ++ M G + + + ++ A S PD +F + +C G+I
Sbjct: 105 AAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIAL 164
Query: 452 GSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCV 511
G + + + ++ + + G L +A + + D V+W ++ G V
Sbjct: 165 GRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMA-ERDCVLWNVMMDGYV 223
Query: 512 SHGNLE-----FGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDL 553
G++ FG + A EP N+ LA + + SDL
Sbjct: 224 KAGSVSSAVELFGDMRAS---GCEP----NFATLACFLSVSATESDL 263
>gi|222625907|gb|EEE60039.1| hypothetical protein OsJ_12814 [Oryza sativa Japonica Group]
Length = 852
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 203/598 (33%), Positives = 314/598 (52%), Gaps = 73/598 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC LDD K+F +MP D LV
Sbjct: 291 MYAKCKCLDDGWKLFGLMPRDD------------------------------------LV 314
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+ +I G QNG+ ++A+ + MQ G+ P++ TL S+LPA L + GKE HGYI
Sbjct: 315 TWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYI 374
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
RN + F+V+ LVD+Y +C V A+
Sbjct: 375 VRNCVHMDVFLVSALVDIYFKCR-------------------------------AVRMAQ 403
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
++D + + V G ++MISGYV N + EA MFR LL GI P + SVL A
Sbjct: 404 SVYDSSKAIDVVIG----STMISGYVLNGMSQEAVKMFRYLL-EQGIRPNAVAIASVLPA 458
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA M +++ G+E+H+ A+ + +V AL++MY + L + F +I + +
Sbjct: 459 CASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTW 518
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
F N A+ LF EM + T+ +LSAC+SL + GK++H I+
Sbjct: 519 NSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIK 578
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
+D+ +AL+DMY KCG+L+ A ++ + + VS N+++ +Y +G KE ++
Sbjct: 579 GPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLVKESVSL 638
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLLS 479
R + GF+ DH++FL+ +SAC HAG ++ G F M Y + P ++H+ CMVDL S
Sbjct: 639 LRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFACMVDLYS 698
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
RAG+L +A E I +P PD+ +WGALL C H N+E +IA+ L +L+P+N+G YV+
Sbjct: 699 RAGKLDKAMELIVDMPFKPDAGIWGALLHACRVHRNVELAEIASQELFKLDPHNSGYYVL 758
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
++N+ A AGRW +++ R+ MKD ++ K PG SW++ + H F A+D+SH SE+IY
Sbjct: 759 MSNINAVAGRWDGVSKVRRLMKDTKVQKIPGYSWVDVNNTSHLFVAADKSHPDSEDIY 816
Score = 212 bits (539), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 135/514 (26%), Positives = 237/514 (46%), Gaps = 73/514 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY G L DA++VF M ERDCV
Sbjct: 190 MYANGGLLWDARQVFDGMAERDCVL----------------------------------- 214
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
W+ ++ G+ + G A+ + M+A G EPN TL+ L A L G + H
Sbjct: 215 -WNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLA 273
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G S V N LV +Y +C + K+F
Sbjct: 274 VKYGLESEVAVANTLVSMYAKCKCLDDGWKLFG--------------------------- 306
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
L + +++WN MISG V N D+A +F D+ + GI P S T S+L A
Sbjct: 307 --------LMPRDDLVTWNGMISGCVQNGFVDQALLLFCDM-QKSGIRPDSVTLVSLLPA 357
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
D+N +GKE+H + + D F+ ALV++Y + + + AQ +D + I+ ++G
Sbjct: 358 LTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIG 417
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G+ N + A+++F +L + P+ + +L AC+S+A M+ G+++H+YA++
Sbjct: 418 STMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALK 477
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
Y+ ++ +AL+DMYAKCG L + + +IS D V+ N+M++++A +G +E +
Sbjct: 478 NAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNL 537
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSR 480
FR + G + +++ S LSAC +I G E ++ ++ L + ++D+ +
Sbjct: 538 FREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIKGPIRADLFAESALIDMYGK 597
Query: 481 AGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
G L A+ + +P + V W +++ ++G
Sbjct: 598 CGNLEWAHRVFESMP-EKNEVSWNSIIASYGAYG 630
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 90/227 (39%), Gaps = 19/227 (8%)
Query: 338 ILSACSSLATMERGKQVHAYAIRCG-YDSDVHIGTALVDMYAKCGSLKHARLAY---KRI 393
+L C S + + G QVH A+ G + +D + T LV MY + A + R
Sbjct: 45 VLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSLPRG 104
Query: 394 STPDLVSQNAMLTAYAMHGHGKEGIAHFRRILA--SGFRPDHISFLSALSACVHAGSIKT 451
+ + N ++ M G + + + ++ A S PD +F + +C G+I
Sbjct: 105 AAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIAL 164
Query: 452 GSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCV 511
G + + + ++ + + G L +A + + D V+W ++ G V
Sbjct: 165 GRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMA-ERDCVLWNVMMDGYV 223
Query: 512 SHGNLE-----FGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDL 553
G++ FG + A EP N+ LA + + SDL
Sbjct: 224 KAGSVSSAVELFGDMRAS---GCEP----NFATLACFLSVSATESDL 263
>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 818
Score = 361 bits (926), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 198/602 (32%), Positives = 321/602 (53%), Gaps = 74/602 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KC +D+A K+F+ M +D LV
Sbjct: 189 LYAKCRQIDNAYKMFERMQHKD------------------------------------LV 212
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ ++ G+ QNG+ + A+ ++ +MQ G +P++ TL S+LPA A ++ L +G+ HGY
Sbjct: 213 SWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVADMKALRIGRSIHGYA 272
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R+GF S V N L+D+Y +CG + AR
Sbjct: 273 FRSGFESLVNVTNALLDMYFKCG-------------------------------SARIAR 301
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+F M + ++SWN+MI G N +EAF+ F +L +G PT T VL+A
Sbjct: 302 LVFKGMR----SKTVVSWNTMIDGCAQNGESEEAFATFLKML-DEGEVPTRVTMMGVLLA 356
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA++ L +G +H L L L S+ V +L+ MY + + + A F+ +E N+
Sbjct: 357 CANLGDLERGWFVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASIFNNLEKT-NVTW 415
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G+ N A+ LF M S + D +T+ +++A + + + K +H A+R
Sbjct: 416 NAMILGYAQNGCVKEALNLFCMMQSQGIKLDCFTLVGVITALADFSVNRQAKWIHGLAVR 475
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
D++V + TALVDMYAKCG++K AR + + +++ NAM+ Y HG GKE +
Sbjct: 476 ACMDNNVFVSTALVDMYAKCGAIKTARKLFDMMQERHVITWNAMIDGYGTHGVGKETLDL 535
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLS 479
F + +P+ I+FLS +SAC H+G ++ G F M Y ++P++ HY+ MVDLL
Sbjct: 536 FNEMQKGAVKPNDITFLSVISACSHSGFVEEGLLLFKSMQEDYYLEPTMDHYSAMVDLLG 595
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
RAG+L +A+ FI+++P+ P + GA+LG C H N+E G+ AA +L +L+P+ G +V+
Sbjct: 596 RAGQLDDAWNFIQEMPIKPGISVLGAMLGACKIHKNVELGEKAAQKLFKLDPDEGGYHVL 655
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTI 599
LAN++A W +A+ R M+D+ +HK+PGCSW+E R+EIH F + +H S++IY
Sbjct: 656 LANIYASNSMWDKVAKVRTAMEDKGLHKTPGCSWVELRNEIHTFYSGSTNHPESKKIYAF 715
Query: 600 ID 601
++
Sbjct: 716 LE 717
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 136/554 (24%), Positives = 231/554 (41%), Gaps = 88/554 (15%)
Query: 60 VSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
V + ++ G+ +N +A+ RM + + + +L C L G+E HG
Sbjct: 111 VLYHIMLKGYAKNSSLGDALCFFLRMMCDEVRLVVGDYACLLQLCGENLDLKKGREIHGL 170
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
I NGF SN FV+ ++ +Y +C + +A K+F + K+ VS T++ GY +NG+ A
Sbjct: 171 IITNGFESNLFVMTAVMSLYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQNGHAKRA 230
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
+L QM+ G + P S T S+L
Sbjct: 231 LQLVLQMQEAGQK------------------------------------PDSVTLVSILP 254
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
A ADM +LR G+ IH A G +S V AL++MY + A++ F + + +
Sbjct: 255 AVADMKALRIGRSIHGYAFRSGFESLVNVTNALLDMYFKCGSARIARLVFKGMRSKTVVS 314
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
DG N + A F +ML P T+ +L AC++L +ERG VH
Sbjct: 315 WNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGWFVHKLLD 374
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
+ DS+V + +L+ MY+KC + A + + + V+ NAM+ YA +G KE +
Sbjct: 375 KLKLDSNVSVMNSLISMYSKCKRVDIAASIFNNLEKTN-VTWNAMILGYAQNGCVKEALN 433
Query: 420 HFRRILASGFRPDHISFLSALSAC-----------VHA---------------------- 446
F + + G + D + + ++A +H
Sbjct: 434 LFCMMQSQGIKLDCFTLVGVITALADFSVNRQAKWIHGLAVRACMDNNVFVSTALVDMYA 493
Query: 447 --GSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAG---ELGEAYEFIKKIPMAPDSV 501
G+IKT + FD+M V + M+D G E + + ++K + P+ +
Sbjct: 494 KCGAIKTARKLFDMMQERHVIT----WNAMIDGYGTHGVGKETLDLFNEMQKGAVKPNDI 549
Query: 502 MWGALLGGCVSHGNLEFGQIAADRLIE---LEPNNTGNYVMLANLFAYAGRWSDLARTRQ 558
+ +++ C G +E G + + E LEP +Y + +L AG+ D Q
Sbjct: 550 TFLSVISACSHSGFVEEGLLLFKSMQEDYYLEP-TMDHYSAMVDLLGRAGQLDDAWNFIQ 608
Query: 559 KMKDRRMHKSPGCS 572
+M + PG S
Sbjct: 609 EMPIK-----PGIS 617
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 174/349 (49%), Gaps = 7/349 (2%)
Query: 166 IIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRD 225
+I +C+ G+ +EA +F EH+ ++ ++ ++ M+ GY NS +A F + M D
Sbjct: 85 VISLFCKFGSNSEAARVF---EHVELKLDVL-YHIMLKGYAKNSSLGDALCFFLRM-MCD 139
Query: 226 GIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAA 285
+ + +L C + L+KG+EIH L I G +S+ FV A++ +Y + + + A
Sbjct: 140 EVRLVVGDYACLLQLCGENLDLKKGREIHGLIITNGFESNLFVMTAVMSLYAKCRQIDNA 199
Query: 286 QMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSL 345
F+ +++ + + G+ N + A+QL +M PD T+ IL A + +
Sbjct: 200 YKMFERMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVADM 259
Query: 346 ATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAML 405
+ G+ +H YA R G++S V++ AL+DMY KCGS + ARL +K + + +VS N M+
Sbjct: 260 KALRIGRSIHGYAFRSGFESLVNVTNALLDMYFKCGSARIARLVFKGMRSKTVVSWNTMI 319
Query: 406 TAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVK 465
A +G +E A F ++L G P ++ + L AC + G ++ G L+ +
Sbjct: 320 DGCAQNGESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGWFVHKLLDKLKLD 379
Query: 466 PSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
++ ++ + S+ + A + +V W A++ G +G
Sbjct: 380 SNVSVMNSLISMYSKCKRVDIAASIFNNLE--KTNVTWNAMILGYAQNG 426
>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
Length = 1024
Score = 361 bits (926), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 202/629 (32%), Positives = 328/629 (52%), Gaps = 71/629 (11%)
Query: 4 KCGSLDDAKKVFKMMP----ERDCVSWNSVVTACAANGLVLEALE--------------- 44
+CG + A ++FK M E D + S+V AC+A+G + +
Sbjct: 326 QCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNK 385
Query: 45 -----------CLERMSSLD----NETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEG 89
C + ++LD E N+V W+ ++ + + + +MQ E
Sbjct: 386 IEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEE 445
Query: 90 LEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSAL 149
+ PN T S+L C RL L LG++ H I + F N +V + L+D+Y + G + +A
Sbjct: 446 IVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAW 505
Query: 150 KIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNS 209
I +F+ K+ ++SW +MI+GY +
Sbjct: 506 DILIRFAGKD-----------------------------------VVSWTTMIAGYTQYN 530
Query: 210 LYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVG 269
D+A + FR +L R GI + + ACA + +L++G++IHA A G SD
Sbjct: 531 FDDKALTTFRQMLDR-GIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQ 589
Query: 270 GALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLT 329
ALV +Y R + + +AF++ E +N+ GF+ + A+++F M +
Sbjct: 590 NALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGID 649
Query: 330 PDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLA 389
+ +T G + A S A M++GKQVHA + GYDS+ + AL+ MYAKCGS+ A
Sbjct: 650 NNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQ 709
Query: 390 YKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSI 449
+ +ST + VS NA++ AY+ HG G E + F +++ S RP+H++ + LSAC H G +
Sbjct: 710 FLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLV 769
Query: 450 KTGSEFFDLM-AYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLG 508
G +F+ M + Y + P +HY C+VD+L+RAG L A EFI+++P+ PD+++W LL
Sbjct: 770 DKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLS 829
Query: 509 GCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKS 568
CV H N+E G+ AA L+ELEP ++ YV+L+NL+A + +W TRQKMK++ + K
Sbjct: 830 ACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKE 889
Query: 569 PGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
PG SWIE ++ IH F D++H ++EI+
Sbjct: 890 PGQSWIEVKNSIHSFYVGDQNHPLADEIH 918
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 143/519 (27%), Positives = 239/519 (46%), Gaps = 77/519 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y + G +D A++VF + +D SW
Sbjct: 191 LYSRNGFVDLARRVFDGLRLKDHSSW---------------------------------- 216
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
A+I G ++N + EAI + M G+ P SSVL AC +++ L +G++ HG +
Sbjct: 217 --VAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLV 274
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ GF S+ +V N LV +Y G+++SA IFS S ++ V+ NT+I G + G +A
Sbjct: 275 LKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAM 334
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
ELF +M HL DG+EP S T S+++A
Sbjct: 335 ELFKRM-HL-----------------------------------DGLEPDSNTLASLVVA 358
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAF--DEIENIENL 298
C+ +L +G+++HA LG S+ + GAL+ +Y + D+ A F E+EN+
Sbjct: 359 CSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLW 418
Query: 299 LGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYA 358
+ G ++ N+ ++F +M ++ P+ YT IL C L +E G+Q+H+
Sbjct: 419 NVMLVAYGLLDDLR--NSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQI 476
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGI 418
I+ + + ++ + L+DMYAK G L A R + D+VS M+ Y + + +
Sbjct: 477 IKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKAL 536
Query: 419 AHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLL 478
FR++L G R D + +A+SAC ++K G + L +V L
Sbjct: 537 TTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLY 596
Query: 479 SRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
SR G++ E+Y ++ A D++ W AL+ G GN E
Sbjct: 597 SRCGKIEESYLAFEQTE-AGDNIAWNALVSGFQQSGNNE 634
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 138/507 (27%), Positives = 220/507 (43%), Gaps = 78/507 (15%)
Query: 6 GSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAV 65
G L A KVF MPER +WN ++ A+ L+
Sbjct: 94 GDLYGAFKVFDEMPERTIFTWNKMIKELASRNLI-------------------------- 127
Query: 66 IGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPAC-ARLQKLSLGKEFHGYITRNG 124
E G+ RM +E + PN T S VL AC + ++ H I G
Sbjct: 128 ----------GEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQG 177
Query: 125 FMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFD 184
+ V N L+D+Y R NG V AR +FD
Sbjct: 178 LRDSTVVCNPLIDLYSR-------------------------------NGFVDLARRVFD 206
Query: 185 QMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADM 244
+ + SW +MISG N EA +F D+ + GI PT + F SVL AC +
Sbjct: 207 GLR----LKDHSSWVAMISGLSKNECEAEAIRLFCDMYVL-GIMPTPYAFSSVLSACKKI 261
Query: 245 NSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKE 304
SL G+++H L + LG SDT+V ALV +Y +L++A+ F + + +
Sbjct: 262 ESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLI 321
Query: 305 DGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYD 364
+G Y AM+LF M L PD T+ ++ ACS+ T+ RG+Q+HAY + G+
Sbjct: 322 NGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFA 381
Query: 365 SDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRI 424
S+ I AL+++YAKC ++ A + ++V N ML AY + + FR++
Sbjct: 382 SNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQM 441
Query: 425 LASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTC--MVDLLSRAG 482
P+ ++ S L C+ G ++ G + + + + L Y C ++D+ ++ G
Sbjct: 442 QIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQ--LNAYVCSVLIDMYAKLG 499
Query: 483 ELGEAYEFIKKIPMAPDSVMWGALLGG 509
+L A++ + + D V W ++ G
Sbjct: 500 KLDTAWDILIRFA-GKDVVSWTTMIAG 525
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 108/252 (42%), Gaps = 36/252 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y +CG ++++ F+ D ++WN++V+ +G EAL RM+
Sbjct: 595 LYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNR--------- 645
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
EG++ N T S + A + + GK+ H I
Sbjct: 646 ---------------------------EGIDNNNFTFGSAVKAASETANMKQGKQVHAVI 678
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
T+ G+ S V N L+ +Y +CG + A K F + S KNEVS N II Y ++G +EA
Sbjct: 679 TKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEAL 738
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+ FDQM H V+ ++ ++S L D+ + F + G+ P + V+
Sbjct: 739 DSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDM 798
Query: 241 CADMNSLRKGKE 252
L + KE
Sbjct: 799 LTRAGLLSRAKE 810
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 150/370 (40%), Gaps = 68/370 (18%)
Query: 202 ISGYVDNSLYDEAFSMFR-DLLMRDGIEPTSFTFGSVLIACADMN-SLRKGKEIHALAIA 259
IS Y+ DE+F R D + GI P T +L C N SL +G+++H+ +
Sbjct: 17 ISVYISE---DESFQEKRIDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILK 73
Query: 260 LGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAM-- 317
LGL S+ + L + Y DL A FDE+ E ++TWN M
Sbjct: 74 LGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMP--------------ERTIFTWNKMIK 119
Query: 318 ------------QLFSEMLSLDLTPDIYTVGIILSAC-SSLATMERGKQVHAYAIRCGYD 364
LF M+S ++TP+ T +L AC + +Q+HA + G
Sbjct: 120 ELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLR 179
Query: 365 SDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRI 424
+ L+D+Y++ G + AR + + D S AM++ + + E I F +
Sbjct: 180 DSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDM 239
Query: 425 LASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-----------------AYYDVKP- 466
G P +F S LSAC S++ G + L+ Y+ +
Sbjct: 240 YVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNL 299
Query: 467 -SLKH------------YTCMVDLLSRAGELGEAYEFIKKIP---MAPDSVMWGALLGGC 510
S +H Y +++ LS+ G +A E K++ + PDS +L+ C
Sbjct: 300 ISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVAC 359
Query: 511 VSHGNLEFGQ 520
+ G L GQ
Sbjct: 360 SADGTLFRGQ 369
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 59/117 (50%), Gaps = 2/117 (1%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGS+ DA+K F + ++ VSWN+++ A + +G EAL+ ++M N PN V
Sbjct: 696 MYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIH-SNVRPNHV 754
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEF 116
+ V+ + G ++ I M +E GL P V+ R LS KEF
Sbjct: 755 TLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEF 811
>gi|449493040|ref|XP_004159175.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g18840-like [Cucumis sativus]
Length = 1096
Score = 360 bits (925), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 206/637 (32%), Positives = 348/637 (54%), Gaps = 47/637 (7%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
Y K G L+DA+K+F MPER+ SWN+++ A + + +A + D LV
Sbjct: 455 FYAKHGLLNDAQKLFDEMPERNVFSWNAIIAAYVKSQNLRQARALFDSAVCKD-----LV 509
Query: 61 SWSAVIGGFTQ-NGYDEEAIGMLFRMQA--EGLEPNARTLSSVLPACARLQKLSLGKEFH 117
++++++ G+ + +GY +A+G MQ + + + TL ++L A+L +S GK+ H
Sbjct: 510 TYNSMLSGYARSDGYQGQALGFFMEMQTAPDMIRIDEFTLITMLNLTAKLCVISYGKQLH 569
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKF-SIKNEVSCNTIIVGYCENGNV 176
++ + F + L+D+Y +CG A +++ + + VS N ++ C G +
Sbjct: 570 SFMLKTANDLTVFAASSLIDMYSKCGFFKEACRVYYGCGEVVDSVSRNAMVAACCREGEI 629
Query: 177 AEARELF-DQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFG 235
A +LF ++E Q +++WN+MISG+V N +E+ +F + + + TF
Sbjct: 630 DVALDLFWKELE----QNDVVAWNTMISGFVQNGYEEESLKLFVRM-ADEKVGWNEHTFA 684
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYC-----RYQDLVAAQMAFD 290
SVL AC+++ SL+ GKE+HA + L ++ F+ LV++YC RY + V +++
Sbjct: 685 SVLSACSNLRSLKLGKEVHAYVLKNRLIANPFICSGLVDVYCKCNNMRYAESVNSELRMQ 744
Query: 291 EIENIENLL------GKMKE-----DGF-EPNVYTWNAM--------------QLFSEML 324
+ +I +++ G M E D E N W A+ +L SE
Sbjct: 745 NVYSITSMIVGYSSQGNMAEARKLFDSLDEKNSVVWTALFFGYVKLQQCEAVFELLSEYR 804
Query: 325 SLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLK 384
PD+ + I+ AC+ A + GKQ+H+Y +R G D + ++LVDMY+KCGS+
Sbjct: 805 KEAKVPDVLILISIIGACAIQAALVPGKQIHSYMLRAGIKLDTKLTSSLVDMYSKCGSII 864
Query: 385 HARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACV 444
+A ++ ++ D + N M+ YA HG E + F+ ++ GF+PD I+F++ LSAC
Sbjct: 865 YAERIFREVTDKDSIIYNIMIAGYAHHGWENEAVQLFKEMVKHGFKPDAITFVALLSACR 924
Query: 445 HAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMW 503
H G ++ G FFD M+ Y++ P + HY CM+DL RA +L +A EF++KIP+ D+V+W
Sbjct: 925 HGGLVELGEHFFDSMSNDYNICPEIDHYACMIDLYGRANQLDKALEFMRKIPIQLDAVIW 984
Query: 504 GALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDR 563
GA L C +GN E + A D L+ +E N YV LAN++A G W ++ R R+KMK +
Sbjct: 985 GAFLNACRINGNAELARKAEDELLVIEGENGSRYVQLANVYAAEGNWEEMGRIRKKMKGK 1044
Query: 564 RMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTII 600
+ K+ GCSW+ + H F + DR H ++E IY+ +
Sbjct: 1045 EVKKNAGCSWVFVESKFHVFISGDRFHSKNEAIYSTL 1081
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 107/459 (23%), Positives = 199/459 (43%), Gaps = 71/459 (15%)
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
++GF F+ N L+ Y + G + A K+F + +N S N II Y ++ N+ +AR
Sbjct: 439 KSGFTPTIFMSNQLITFYAKHGLLNDAQKLFDEMPERNVFSWNAIIAAYVKSQNLRQARA 498
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYD-EAFSMFRDL-LMRDGIEPTSFTFGSVLI 239
LFD V + ++++NSM+SGY + Y +A F ++ D I FT ++L
Sbjct: 499 LFDS----AVCKDLVTYNSMLSGYARSDGYQGQALGFFMEMQTAPDMIRIDEFTLITMLN 554
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMY----------------------- 276
A + + GK++H+ + F +L++MY
Sbjct: 555 LTAKLCVISYGKQLHSFMLKTANDLTVFAASSLIDMYSKCGFFKEACRVYYGCGEVVDSV 614
Query: 277 ---------CRYQDL-VAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSL 326
CR ++ VA + + E+E + + GF N Y +++LF M
Sbjct: 615 SRNAMVAACCREGEIDVALDLFWKELEQNDVVAWNTMISGFVQNGYEEESLKLFVRMADE 674
Query: 327 DLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHA 386
+ + +T +LSACS+L +++ GK+VHAY ++ ++ I + LVD+Y KC ++++A
Sbjct: 675 KVGWNEHTFASVLSACSNLRSLKLGKEVHAYVLKNRLIANPFICSGLVDVYCKCNNMRYA 734
Query: 387 RLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRI---------------------- 424
+ ++ S +M+ Y+ G+ E F +
Sbjct: 735 ESVNSELRMQNVYSITSMIVGYSSQGNMAEARKLFDSLDEKNSVVWTALFFGYVKLQQCE 794
Query: 425 ----LASGFR-----PDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMV 475
L S +R PD + +S + AC ++ G + M +K K + +V
Sbjct: 795 AVFELLSEYRKEAKVPDVLILISIIGACAIQAALVPGKQIHSYMLRAGIKLDTKLTSSLV 854
Query: 476 DLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
D+ S+ G + A +++ DS+++ ++ G HG
Sbjct: 855 DMYSKCGSIIYAERIFREV-TDKDSIIYNIMIAGYAHHG 892
>gi|357504267|ref|XP_003622422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497437|gb|AES78640.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 952
Score = 360 bits (925), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 196/608 (32%), Positives = 324/608 (53%), Gaps = 76/608 (12%)
Query: 34 AANGLV--LEALECLERMSSLDNETP--NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEG 89
+N LV E+ C+ ++ + P N+++W+++ + G+ ++ + + M G
Sbjct: 279 VSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVNCGFPQKGLNVFREMGLNG 338
Query: 90 LEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSAL 149
++P+ +SS+LPAC++L+ L GK HG+ ++G + + FV LV++Y C
Sbjct: 339 VKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTALVNLYANC------- 391
Query: 150 KIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNS 209
C V EA+ +FD M H R +++WNS+ S YV+
Sbjct: 392 --------------------LC----VREAQTVFDLMPH----RNVVTWNSLSSCYVNCG 423
Query: 210 LYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVG 269
+ ++FR++++ +G++P T S+L AC+D+ L+ GK IH A+ G+ D FV
Sbjct: 424 FPQKGLNVFREMVL-NGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVEDVFVC 482
Query: 270 GALVEMYCRYQDLVAAQMAFDEIENIE---------------------NLLGKMKEDGFE 308
AL+ +Y + + AQ+ FD I + E + +M D +
Sbjct: 483 NALLSLYAKCVCVREAQVVFDLIPHREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVK 542
Query: 309 PNVYTWN--------------AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV 354
+ TW+ AM++F +M ++ PD T+ IL ACS + GK++
Sbjct: 543 ADEITWSVVIGGCVKNSRIEEAMEIFRKMQTMGFKPDETTIYSILRACSLSECLRMGKEI 602
Query: 355 HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHG 414
H Y R D D+ ALVDMYAKCG L +R + + D+ S N M+ A MHG+G
Sbjct: 603 HCYVFRHWKDWDLARTNALVDMYAKCGGLSLSRNVFDMMPIKDVFSWNTMIFANGMHGNG 662
Query: 415 KEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTC 473
KE ++ F ++L S +PD +F LSAC H+ ++ G + F+ M+ + V+P +HYTC
Sbjct: 663 KEALSLFEKMLLSMVKPDSATFTCVLSACSHSMLVEEGVQIFNSMSRDHLVEPEAEHYTC 722
Query: 474 MVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNN 533
+VD+ SRAG L EAY FI+++PM P ++ W A L GC + N+E +I+A +L E++PN
Sbjct: 723 VVDIYSRAGCLEEAYGFIQRMPMEPTAIAWKAFLAGCRVYKNVELAKISAKKLFEIDPNG 782
Query: 534 TGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRS 593
+ NYV L N+ A WS+ ++ R+ MK+R + K+PGCSW + +H F A D+S+ S
Sbjct: 783 SANYVTLFNILVTAKLWSEASKIRKLMKERGITKTPGCSWFHVGNRVHTFVAGDKSNMES 842
Query: 594 EEIYTIID 601
++IY +D
Sbjct: 843 DKIYNFLD 850
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 141/564 (25%), Positives = 246/564 (43%), Gaps = 134/564 (23%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
YGKC ++ A++VF + RD V+WNS+ +AC
Sbjct: 85 YGKCKCVEGARRVFDDLVARDVVTWNSL-SAC---------------------------- 115
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
+ G+ ++ + + +M ++ N T+SS+LP C+ LQ L GKE HG++
Sbjct: 116 -------YVNCGFPQQGLNVFRKMGLNKVKANPLTVSSILPGCSDLQDLKSGKEIHGFVV 168
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
R+G + + FV + V+ Y +C C V EA+
Sbjct: 169 RHGMVEDVFVSSAFVNFYAKC---------------------------LC----VREAQT 197
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
+FD M H R +++WNS+ S YV+ + ++FR++++ DG++P T +L AC
Sbjct: 198 VFDLMPH----RDVVTWNSLSSCYVNCGFPQKGLNVFREMVL-DGVKPDPVTVSCILSAC 252
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK 301
+D+ L+ GK IH A+ G+ + FV ALV +Y + AQ FD + +
Sbjct: 253 SDLQDLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPH------- 305
Query: 302 MKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSSLAT 347
NV TWN++ +F EM + PD + IL ACS L
Sbjct: 306 -------RNVITWNSLASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKD 358
Query: 348 MERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTA 407
++ GK +H +A++ G DV + TALV++YA C ++ A+ + + ++V+ N++ +
Sbjct: 359 LKSGKTIHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSC 418
Query: 408 YAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPS 467
Y G ++G+ FR ++ +G +PD ++ LS L AC +K+G + +
Sbjct: 419 YVNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVED 478
Query: 468 LKHYTCMVDLLSRAGELGEAYEFIKKIP-------------------------------- 495
+ ++ L ++ + EA IP
Sbjct: 479 VFVCNALLSLYAKCVCVREAQVVFDLIPHREVASWNGILTAYFTNKEYEKGLYMFSQMNR 538
Query: 496 --MAPDSVMWGALLGGCVSHGNLE 517
+ D + W ++GGCV + +E
Sbjct: 539 DEVKADEITWSVVIGGCVKNSRIE 562
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 109/435 (25%), Positives = 198/435 (45%), Gaps = 37/435 (8%)
Query: 72 NGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFV 131
+G EAI + +A G++P+ +V ACA + K+FH TR G MS+ +
Sbjct: 18 HGLPNEAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSI 77
Query: 132 VNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGV 191
N + Y +C C G AR +FD + V
Sbjct: 78 GNAFIHAYGKCK---------------------------CVEG----ARRVFDDL----V 102
Query: 192 QRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGK 251
R +++WNS+ + YV+ + ++FR + + + ++ T S+L C+D+ L+ GK
Sbjct: 103 ARDVVTWNSLSACYVNCGFPQQGLNVFRKMGL-NKVKANPLTVSSILPGCSDLQDLKSGK 161
Query: 252 EIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNV 311
EIH + G+ D FV A V Y + + AQ FD + + + + +
Sbjct: 162 EIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLMPHRDVVTWNSLSSCYVNCG 221
Query: 312 YTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGT 371
+ + +F EM+ + PD TV ILSACS L ++ GK +H +A++ G +V +
Sbjct: 222 FPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKSGKAIHGFALKHGMVENVFVSN 281
Query: 372 ALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRP 431
ALV++Y C ++ A+ + + ++++ N++ + Y G ++G+ FR + +G +P
Sbjct: 282 ALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVNCGFPQKGLNVFREMGLNGVKP 341
Query: 432 DHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFI 491
D ++ S L AC +K+G + + + T +V+L + + EA
Sbjct: 342 DPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQTVF 401
Query: 492 KKIPMAPDSVMWGAL 506
+P + V W +L
Sbjct: 402 DLMPHR-NVVTWNSL 415
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 124/238 (52%), Gaps = 1/238 (0%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KC + +A+ VF ++P R+ SWN ++TA N + L +M+ D + +
Sbjct: 488 LYAKCVCVREAQVVFDLIPHREVASWNGILTAYFTNKEYEKGLYMFSQMNR-DEVKADEI 546
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+WS VIGG +N EEA+ + +MQ G +P+ T+ S+L AC+ + L +GKE H Y+
Sbjct: 547 TWSVVIGGCVKNSRIEEAMEIFRKMQTMGFKPDETTIYSILRACSLSECLRMGKEIHCYV 606
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R+ + N LVD+Y +CG + + +F IK+ S NT+I +GN EA
Sbjct: 607 FRHWKDWDLARTNALVDMYAKCGGLSLSRNVFDMMPIKDVFSWNTMIFANGMHGNGKEAL 666
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
LF++M V+ ++ ++S + L +E +F + +EP + + V+
Sbjct: 667 SLFEKMLLSMVKPDSATFTCVLSACSHSMLVEEGVQIFNSMSRDHLVEPEAEHYTCVV 724
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 120/247 (48%), Gaps = 1/247 (0%)
Query: 206 VDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSD 265
+ + L +EA ++ R GI+P F +V ACA K K+ H A G+ SD
Sbjct: 16 IPHGLPNEAIKIYTSSRAR-GIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSD 74
Query: 266 TFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLS 325
+G A + Y + + + A+ FD++ + + + + + +F +M
Sbjct: 75 VSIGNAFIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGL 134
Query: 326 LDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKH 385
+ + TV IL CS L ++ GK++H + +R G DV + +A V+ YAKC ++
Sbjct: 135 NKVKANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVRE 194
Query: 386 ARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVH 445
A+ + + D+V+ N++ + Y G ++G+ FR ++ G +PD ++ LSAC
Sbjct: 195 AQTVFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSD 254
Query: 446 AGSIKTG 452
+K+G
Sbjct: 255 LQDLKSG 261
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 63/123 (51%), Gaps = 5/123 (4%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG L ++ VF MMP +D SWN+++ A +G EAL E+M L P+
Sbjct: 624 MYAKCGGLSLSRNVFDMMPIKDVFSWNTMIFANGMHGNGKEALSLFEKM-LLSMVKPDSA 682
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGL-EPNARTLSSVLPACARLQKLSLGKEFHGY 119
+++ V+ + + EE + + M + L EP A + V+ +R L +E +G+
Sbjct: 683 TFTCVLSACSHSMLVEEGVQIFNSMSRDHLVEPEAEHYTCVVDIYSRAGCL---EEAYGF 739
Query: 120 ITR 122
I R
Sbjct: 740 IQR 742
>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1064
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 202/629 (32%), Positives = 328/629 (52%), Gaps = 71/629 (11%)
Query: 4 KCGSLDDAKKVFKMMP----ERDCVSWNSVVTACAANGLVLEALE--------------- 44
+CG + A ++FK M E D + S+V AC+A+G + +
Sbjct: 366 QCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNK 425
Query: 45 -----------CLERMSSLD----NETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEG 89
C + ++LD E N+V W+ ++ + + + +MQ E
Sbjct: 426 IEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEE 485
Query: 90 LEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSAL 149
+ PN T S+L C RL L LG++ H I + F N +V + L+D+Y + G + +A
Sbjct: 486 IVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAW 545
Query: 150 KIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNS 209
I +F+ K+ ++SW +MI+GY +
Sbjct: 546 DILIRFAGKD-----------------------------------VVSWTTMIAGYTQYN 570
Query: 210 LYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVG 269
D+A + FR +L R GI + + ACA + +L++G++IHA A G SD
Sbjct: 571 FDDKALTTFRQMLDR-GIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQ 629
Query: 270 GALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLT 329
ALV +Y R + + +AF++ E +N+ GF+ + A+++F M +
Sbjct: 630 NALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGID 689
Query: 330 PDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLA 389
+ +T G + A S A M++GKQVHA + GYDS+ + AL+ MYAKCGS+ A
Sbjct: 690 NNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQ 749
Query: 390 YKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSI 449
+ +ST + VS NA++ AY+ HG G E + F +++ S RP+H++ + LSAC H G +
Sbjct: 750 FLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLV 809
Query: 450 KTGSEFFDLM-AYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLG 508
G +F+ M + Y + P +HY C+VD+L+RAG L A EFI+++P+ PD+++W LL
Sbjct: 810 DKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLS 869
Query: 509 GCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKS 568
CV H N+E G+ AA L+ELEP ++ YV+L+NL+A + +W TRQKMK++ + K
Sbjct: 870 ACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKE 929
Query: 569 PGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
PG SWIE ++ IH F D++H ++EI+
Sbjct: 930 PGQSWIEVKNSIHSFYVGDQNHPLADEIH 958
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 143/519 (27%), Positives = 239/519 (46%), Gaps = 77/519 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y + G +D A++VF + +D SW
Sbjct: 231 LYSRNGFVDLARRVFDGLRLKDHSSW---------------------------------- 256
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
A+I G ++N + EAI + M G+ P SSVL AC +++ L +G++ HG +
Sbjct: 257 --VAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLV 314
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ GF S+ +V N LV +Y G+++SA IFS S ++ V+ NT+I G + G +A
Sbjct: 315 LKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAM 374
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
ELF +M HL DG+EP S T S+++A
Sbjct: 375 ELFKRM-HL-----------------------------------DGLEPDSNTLASLVVA 398
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAF--DEIENIENL 298
C+ +L +G+++HA LG S+ + GAL+ +Y + D+ A F E+EN+
Sbjct: 399 CSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLW 458
Query: 299 LGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYA 358
+ G ++ N+ ++F +M ++ P+ YT IL C L +E G+Q+H+
Sbjct: 459 NVMLVAYGLLDDLR--NSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQI 516
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGI 418
I+ + + ++ + L+DMYAK G L A R + D+VS M+ Y + + +
Sbjct: 517 IKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKAL 576
Query: 419 AHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLL 478
FR++L G R D + +A+SAC ++K G + L +V L
Sbjct: 577 TTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLY 636
Query: 479 SRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
SR G++ E+Y ++ A D++ W AL+ G GN E
Sbjct: 637 SRCGKIEESYLAFEQTE-AGDNIAWNALVSGFQQSGNNE 674
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 138/507 (27%), Positives = 220/507 (43%), Gaps = 78/507 (15%)
Query: 6 GSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAV 65
G L A KVF MPER +WN ++ A+ L+
Sbjct: 134 GDLYGAFKVFDEMPERTIFTWNKMIKELASRNLI-------------------------- 167
Query: 66 IGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPAC-ARLQKLSLGKEFHGYITRNG 124
E G+ RM +E + PN T S VL AC + ++ H I G
Sbjct: 168 ----------GEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQG 217
Query: 125 FMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFD 184
+ V N L+D+Y R NG V AR +FD
Sbjct: 218 LRDSTVVCNPLIDLYSR-------------------------------NGFVDLARRVFD 246
Query: 185 QMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADM 244
+ + SW +MISG N EA +F D+ + GI PT + F SVL AC +
Sbjct: 247 GLR----LKDHSSWVAMISGLSKNECEAEAIRLFCDMYVL-GIMPTPYAFSSVLSACKKI 301
Query: 245 NSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKE 304
SL G+++H L + LG SDT+V ALV +Y +L++A+ F + + +
Sbjct: 302 ESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLI 361
Query: 305 DGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYD 364
+G Y AM+LF M L PD T+ ++ ACS+ T+ RG+Q+HAY + G+
Sbjct: 362 NGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFA 421
Query: 365 SDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRI 424
S+ I AL+++YAKC ++ A + ++V N ML AY + + FR++
Sbjct: 422 SNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQM 481
Query: 425 LASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTC--MVDLLSRAG 482
P+ ++ S L C+ G ++ G + + + + L Y C ++D+ ++ G
Sbjct: 482 QIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQ--LNAYVCSVLIDMYAKLG 539
Query: 483 ELGEAYEFIKKIPMAPDSVMWGALLGG 509
+L A++ + + D V W ++ G
Sbjct: 540 KLDTAWDILIRFA-GKDVVSWTTMIAG 565
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 108/252 (42%), Gaps = 36/252 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y +CG ++++ F+ D ++WN++V+ +G EAL RM+
Sbjct: 635 LYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNR--------- 685
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
EG++ N T S + A + + GK+ H I
Sbjct: 686 ---------------------------EGIDNNNFTFGSAVKAASETANMKQGKQVHAVI 718
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
T+ G+ S V N L+ +Y +CG + A K F + S KNEVS N II Y ++G +EA
Sbjct: 719 TKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEAL 778
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+ FDQM H V+ ++ ++S L D+ + F + G+ P + V+
Sbjct: 779 DSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDM 838
Query: 241 CADMNSLRKGKE 252
L + KE
Sbjct: 839 LTRAGLLSRAKE 850
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 150/370 (40%), Gaps = 68/370 (18%)
Query: 202 ISGYVDNSLYDEAFSMFR-DLLMRDGIEPTSFTFGSVLIACADMN-SLRKGKEIHALAIA 259
IS Y+ DE+F R D + GI P T +L C N SL +G+++H+ +
Sbjct: 57 ISVYISE---DESFQEKRIDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILK 113
Query: 260 LGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAM-- 317
LGL S+ + L + Y DL A FDE+ E ++TWN M
Sbjct: 114 LGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMP--------------ERTIFTWNKMIK 159
Query: 318 ------------QLFSEMLSLDLTPDIYTVGIILSAC-SSLATMERGKQVHAYAIRCGYD 364
LF M+S ++TP+ T +L AC + +Q+HA + G
Sbjct: 160 ELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLR 219
Query: 365 SDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRI 424
+ L+D+Y++ G + AR + + D S AM++ + + E I F +
Sbjct: 220 DSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDM 279
Query: 425 LASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-----------------AYYDVKP- 466
G P +F S LSAC S++ G + L+ Y+ +
Sbjct: 280 YVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNL 339
Query: 467 -SLKH------------YTCMVDLLSRAGELGEAYEFIKKIP---MAPDSVMWGALLGGC 510
S +H Y +++ LS+ G +A E K++ + PDS +L+ C
Sbjct: 340 ISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVAC 399
Query: 511 VSHGNLEFGQ 520
+ G L GQ
Sbjct: 400 SADGTLFRGQ 409
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 59/117 (50%), Gaps = 2/117 (1%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGS+ DA+K F + ++ VSWN+++ A + +G EAL+ ++M N PN V
Sbjct: 736 MYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIH-SNVRPNHV 794
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEF 116
+ V+ + G ++ I M +E GL P V+ R LS KEF
Sbjct: 795 TLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEF 851
>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
Length = 694
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 184/546 (33%), Positives = 301/546 (55%), Gaps = 38/546 (6%)
Query: 53 DNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSL 112
D P + W+A+I G+++N + ++A+ M MQ + P++ T +L AC+ L L +
Sbjct: 78 DLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQM 137
Query: 113 GKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSI--KNEVSCNTIIVGY 170
G+ H + R GF ++ FV NGL+ +Y +C + SA +F + + VS I+ Y
Sbjct: 138 GRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAY 197
Query: 171 CENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPT 230
+NG EA E+F M + V+ P
Sbjct: 198 AQNGEPMEALEIFSHMRKMDVK------------------------------------PD 221
Query: 231 SFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFD 290
SVL A + L++G+ IHA + +GL+ + + +L MY + + A++ FD
Sbjct: 222 WVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFD 281
Query: 291 EIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMER 350
++++ +L G+ N Y A+ +F EM++ D+ PD ++ +SAC+ + ++E+
Sbjct: 282 KMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQ 341
Query: 351 GKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAM 410
+ ++ Y R Y DV I +AL+DM+AKCGS++ ARL + R D+V +AM+ Y +
Sbjct: 342 ARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGL 401
Query: 411 HGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKH 470
HG +E I+ +R + G P+ ++FL L AC H+G ++ G FF+LMA + + P +H
Sbjct: 402 HGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNLMADHKINPQQQH 461
Query: 471 YTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELE 530
Y C++DLL RAG L +AYE IK +P+ P +WGALL C H ++E G+ AA +L ++
Sbjct: 462 YACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSID 521
Query: 531 PNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSH 590
P+NTG+YV L+NL+A A W +A R +MK++ ++K GCSW+E R + FR D+SH
Sbjct: 522 PSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSH 581
Query: 591 DRSEEI 596
R EEI
Sbjct: 582 PRYEEI 587
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 148/307 (48%), Gaps = 29/307 (9%)
Query: 221 LLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQ 280
L GI SF + S++ + L K+IHA + LGLQ F+ L+ +
Sbjct: 12 LYTNSGIHSDSF-YASLIDSATHKAQL---KQIHARLLVLGLQFSGFLITKLIHASSSFG 67
Query: 281 DLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILS 340
D+ A+ FD++ + G+ N + +A+ ++S M ++PD +T +L
Sbjct: 68 DITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLK 127
Query: 341 ACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPD--L 398
ACS L+ ++ G+ VHA R G+D+DV + L+ +YAKC L AR ++ + P+ +
Sbjct: 128 ACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTI 187
Query: 399 VSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSA-----------CVHAG 447
VS A+++AYA +G E + F + +PD ++ +S L+A +HA
Sbjct: 188 VSWTAIVSAYAQNGEPMEALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHAS 247
Query: 448 SIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALL 507
+K G E ++P L + + ++ G++ A K+ +P+ ++W A++
Sbjct: 248 VVKMGLE---------IEPDL--LISLNTMYAKCGQVATAKILFDKMK-SPNLILWNAMI 295
Query: 508 GGCVSHG 514
G +G
Sbjct: 296 SGYAKNG 302
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 156/363 (42%), Gaps = 71/363 (19%)
Query: 1 MYGKCGSLDDAKKVFK--MMPERDCVSWNSVVTACAANG--------------------- 37
+Y KC L A+ VF+ +PER VSW ++V+A A NG
Sbjct: 163 LYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSHMRKMDVKPDW 222
Query: 38 ----LVLEALECLERMS----------------------SLDN----------------- 54
VL A CL+ + SL+
Sbjct: 223 VALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDK 282
Query: 55 -ETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLG 113
++PNL+ W+A+I G+ +NGY EAI M M + + P+ +++S + ACA++ L
Sbjct: 283 MKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQA 342
Query: 114 KEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCEN 173
+ + Y+ R+ + + F+ + L+D++ +CG + A +F + ++ V + +IVGY +
Sbjct: 343 RSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLH 402
Query: 174 GNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFT 233
G EA L+ ME GV +++ ++ + + E + F +L+ I P
Sbjct: 403 GRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFF-NLMADHKINPQQQH 461
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
+ V+ L + E+ + +Q V GAL+ +++ + + A ++
Sbjct: 462 YACVIDLLGRAGHLDQAYEV---IKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLF 518
Query: 294 NIE 296
+I+
Sbjct: 519 SID 521
>gi|224119336|ref|XP_002331286.1| predicted protein [Populus trichocarpa]
gi|222873711|gb|EEF10842.1| predicted protein [Populus trichocarpa]
Length = 897
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 202/598 (33%), Positives = 312/598 (52%), Gaps = 73/598 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG + DA+KV MP+ S+N+++ A + +AL+ + +
Sbjct: 326 MYAKCGRMADAQKVLSSMPKCSLQSYNAIIVGYARSDRGFQALKSFQLLLK--------- 376
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
T G+DE TLS L ACA ++ G++ HG
Sbjct: 377 ---------TGLGFDE------------------ITLSGALNACASIRGDLEGRQVHGLA 409
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
++ MSN V N ++D+Y +C + AEA
Sbjct: 410 VKSISMSNICVANAILDMYGKCKAL-------------------------------AEAS 438
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+LFD ME +R +SWN++I+ N +E + F ++ +EP FT+GSVL A
Sbjct: 439 DLFDMME----RRDAVSWNAIIAACEQNGNEEETLAHFASMI-HSRMEPDDFTYGSVLKA 493
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA +L G EIH I G+ D+FVG ALV+MYC+ + A D E +
Sbjct: 494 CAGRQALNTGMEIHTRIIKSGMGFDSFVGAALVDMYCKCGMIEKADKIHDRTEQKTMVSW 553
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
GF + +A + FS ML + + PD +T +L C++LAT+ GKQ+HA I+
Sbjct: 554 NAIISGFSLLQQSEDAHKFFSRMLEMGVNPDNFTYAAVLDTCANLATVGLGKQIHAQIIK 613
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
SDV+I + LVDMY+KCG+++ ++L +++ D V+ NAML YA HG G+E +
Sbjct: 614 QELQSDVYICSTLVDMYSKCGNMQDSQLMFEKAPNRDFVTWNAMLCGYAHHGLGEEALKL 673
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMVDLLS 479
F + +P+H +F+S L AC H G + G +FD+M + Y + P +HY+CMVD+L
Sbjct: 674 FESMQLVNVKPNHATFVSVLRACAHMGLVDKGLHYFDVMLSEYGLDPQSEHYSCMVDILG 733
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
R+G + EA ++K+P D+V+W LL C HGN+E + A L++L+P ++ V+
Sbjct: 734 RSGRIDEALNLVQKMPFEADAVIWRNLLSVCKIHGNVEVAEKATRALLQLDPQDSSACVL 793
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
L+N++A AG W +++ R+ M+ ++ K PGCSWIE +DE+H F D+ H R EEIY
Sbjct: 794 LSNIYADAGMWGNVSEMRKMMRHNKLKKEPGCSWIELKDEVHAFLVGDKGHPRDEEIY 851
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 136/455 (29%), Positives = 221/455 (48%), Gaps = 41/455 (9%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC LD A KVF M RD VS+NS+++ A+ G + A + M D +V
Sbjct: 93 MYIKCLYLDYACKVFDKMYLRDVVSYNSIISGYASCGEMDIARKFFYEMPERD-----VV 147
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW++VI GF QNG ++I + M G+ + +L+ VL AC L++ +G + HG +
Sbjct: 148 SWNSVISGFLQNGECRKSIDVFLEMGRCGVGFDRASLAVVLKACGALEECDMGVQVHGLV 207
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ GF + + L+ +Y +C + +L +FS+ KN VS + +I G +N E
Sbjct: 208 VKFGFDCDVVTGSALLGMYAKCKRLDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGL 267
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
ELF +M+ +GV V S+Y S+FR +
Sbjct: 268 ELFKEMQGVGVG-------------VSQSIYA---SLFR--------------------S 291
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA +++LR GKE+H+ A+ SD VG A ++MY + + AQ +
Sbjct: 292 CAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSLQSY 351
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G+ + + A++ F +L L D T+ L+AC+S+ G+QVH A++
Sbjct: 352 NAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLEGRQVHGLAVK 411
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
S++ + A++DMY KC +L A + + D VS NA++ A +G+ +E +AH
Sbjct: 412 SISMSNICVANAILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAACEQNGNEEETLAH 471
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEF 455
F ++ S PD ++ S L AC ++ TG E
Sbjct: 472 FASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEI 506
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 137/522 (26%), Positives = 238/522 (45%), Gaps = 35/522 (6%)
Query: 91 EPNA--RTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSA 148
+P A RT S + C++ L+ GK+ H + GF FV N L+ +Y +C + A
Sbjct: 44 QPPAKIRTFSHIYQECSKQNSLNPGKQAHARMIFCGFEPTTFVSNCLMQMYIKCLYLDYA 103
Query: 149 LKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDN 208
K+F K +++ VS N+II GY G + AR+ F +M +R ++SWNS+ISG++ N
Sbjct: 104 CKVFDKMYLRDVVSYNSIISGYASCGEMDIARKFFYEMP----ERDVVSWNSVISGFLQN 159
Query: 209 SLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFV 268
++ +F ++ R G+ + VL AC + G ++H L + G D
Sbjct: 160 GECRKSIDVFLEM-GRCGVGFDRASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVT 218
Query: 269 GGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDL 328
G AL+ MY + + L + F E+ + G N ++LF EM + +
Sbjct: 219 GSALLGMYAKCKRLDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGV 278
Query: 329 TPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARL 388
+ +C++L+ + GK++H++A++ + SD+ +GTA +DMYAKCG + A+
Sbjct: 279 GVSQSIYASLFRSCAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQK 338
Query: 389 AYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGS 448
+ L S NA++ YA G + + F+ +L +G D I+ AL+AC
Sbjct: 339 VLSSMPKCSLQSYNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRG 398
Query: 449 IKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLG 508
G + L ++ ++D+ + L EA + + D+V W A++
Sbjct: 399 DLEGRQVHGLAVKSISMSNICVANAILDMYGKCKALAEASDLFDMMERR-DAVSWNAIIA 457
Query: 509 GCVSHGNLE--FGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMH 566
C +GN E A+ +EP+ ++ + L A AGR + T ++ R +
Sbjct: 458 ACEQNGNEEETLAHFASMIHSRMEPD---DFTYGSVLKACAGRQA--LNTGMEIHTRIIK 512
Query: 567 KSPG---------------CSWIEDRDEIHKFRASDRSHDRS 593
G C IE D+IH DR+ ++
Sbjct: 513 SGMGFDSFVGAALVDMYCKCGMIEKADKIH-----DRTEQKT 549
>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
Length = 694
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 184/546 (33%), Positives = 301/546 (55%), Gaps = 38/546 (6%)
Query: 53 DNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSL 112
D P + W+A+I G+++N + ++A+ M MQ + P++ T +L AC+ L L +
Sbjct: 78 DLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQM 137
Query: 113 GKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSI--KNEVSCNTIIVGY 170
G+ H + R GF ++ FV NGL+ +Y +C + SA +F + + VS I+ Y
Sbjct: 138 GRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAY 197
Query: 171 CENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPT 230
+NG EA E+F QM + V+ P
Sbjct: 198 AQNGEPMEALEIFSQMRKMDVK------------------------------------PD 221
Query: 231 SFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFD 290
SVL A + L++G+ IHA + +GL+ + + +L MY + + A++ FD
Sbjct: 222 WVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFD 281
Query: 291 EIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMER 350
++++ +L G+ N Y A+ +F EM++ D+ PD ++ +SAC+ + ++E+
Sbjct: 282 KMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQ 341
Query: 351 GKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAM 410
+ ++ Y R Y DV I +AL+DM+AKCGS++ ARL + R D+V +AM+ Y +
Sbjct: 342 ARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGL 401
Query: 411 HGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKH 470
HG +E I+ +R + G P+ ++FL L AC H+G ++ G FF+ MA + + P +H
Sbjct: 402 HGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQH 461
Query: 471 YTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELE 530
Y C++DLL RAG L +AYE IK +P+ P +WGALL C H ++E G+ AA +L ++
Sbjct: 462 YACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSID 521
Query: 531 PNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSH 590
P+NTG+YV L+NL+A A W +A R +MK++ ++K GCSW+E R + FR D+SH
Sbjct: 522 PSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSH 581
Query: 591 DRSEEI 596
R EEI
Sbjct: 582 PRYEEI 587
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 149/307 (48%), Gaps = 29/307 (9%)
Query: 221 LLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQ 280
L GI SF + S++ + L K+IHA + LGLQ F+ L+ +
Sbjct: 12 LYTNSGIHSDSF-YASLIDSATHKAQL---KQIHARLLVLGLQFSGFLITKLIHASSSFG 67
Query: 281 DLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILS 340
D+ A+ FD++ + G+ N + +A+ ++S M ++PD +T +L
Sbjct: 68 DITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLK 127
Query: 341 ACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPD--L 398
ACS L+ ++ G+ VHA R G+D+DV + L+ +YAKC L AR ++ + P+ +
Sbjct: 128 ACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTI 187
Query: 399 VSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSA-----------CVHAG 447
VS A+++AYA +G E + F ++ +PD ++ +S L+A +HA
Sbjct: 188 VSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHAS 247
Query: 448 SIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALL 507
+K G E ++P L + + ++ G++ A K+ +P+ ++W A++
Sbjct: 248 VVKMGLE---------IEPDL--LISLNTMYAKCGQVATAKILFDKMK-SPNLILWNAMI 295
Query: 508 GGCVSHG 514
G +G
Sbjct: 296 SGYAKNG 302
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 92/409 (22%), Positives = 163/409 (39%), Gaps = 109/409 (26%)
Query: 1 MYGKCGSLDDAKKVFK--MMPERDCVSWNSVVTACAANG--------------------- 37
+Y KC L A+ VF+ +PER VSW ++V+A A NG
Sbjct: 163 LYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDW 222
Query: 38 ----LVLEALECLERMS----------------------SLDN----------------- 54
VL A CL+ + SL+
Sbjct: 223 VALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDK 282
Query: 55 -ETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLG 113
++PNL+ W+A+I G+ +NGY EAI M M + + P+ +++S + ACA++ L
Sbjct: 283 MKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQA 342
Query: 114 KEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCEN 173
+ + Y+ R+ + + F+ + L+D++ +CG + A +F + ++ V + +IVGY +
Sbjct: 343 RSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLH 402
Query: 174 GNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFR-------------- 219
G EA L+ ME GV +++ ++ + + E + F
Sbjct: 403 GRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHY 462
Query: 220 ----DLLMRDG-------------IEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGL 262
DLL R G ++P +G++L AC + G+
Sbjct: 463 ACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGE--------YAA 514
Query: 263 QSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNV 311
Q + + Y + +L AA +D + + +MKE G +V
Sbjct: 515 QQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRV---RMKEKGLNKDV 560
>gi|296082505|emb|CBI21510.3| unnamed protein product [Vitis vinifera]
Length = 746
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 192/582 (32%), Positives = 319/582 (54%), Gaps = 42/582 (7%)
Query: 20 ERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAI 79
++D S++ + NG + EA +++S V+W+ +I G+T+ G ++
Sbjct: 183 DQDVYVGTSLIDFYSKNGNIEEARLVFDQLSE-----KTAVTWTTIIAGYTKCGRSAVSL 237
Query: 80 GMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVY 139
+ +M+ + P+ +SSVL AC+ L+ L GK+ H Y+ R G + VVN L+D Y
Sbjct: 238 ELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFY 297
Query: 140 RRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWN 199
+C V R+LFDQM V + IISW
Sbjct: 298 TKCN-------------------------------RVKAGRKLFDQM----VVKNIISWT 322
Query: 200 SMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIA 259
+MISGY+ NS EA +F ++ R G +P F SVL +C +L +G+++HA I
Sbjct: 323 TMISGYMQNSFDWEAMKLFGEM-NRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIK 381
Query: 260 LGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQL 319
L+SD FV L++MY + L+ A+ FD + + +G+ A++L
Sbjct: 382 ANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALEL 441
Query: 320 FSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAK 379
F EM P+ +T +++A S+LA++ G+Q H ++ G D + ALVDMYAK
Sbjct: 442 FHEMRVRLQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAK 501
Query: 380 CGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSA 439
CGS++ AR + D+V N+M++ +A HG +E + FR ++ G +P++++F++
Sbjct: 502 CGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAV 561
Query: 440 LSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPD 499
LSAC HAG ++ G F+ M + +KP +HY C+V LL R+G+L EA EFI+K+P+ P
Sbjct: 562 LSACSHAGRVEDGLNHFNSMPGFGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPA 621
Query: 500 SVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQK 559
+++W +LL C GN+E G+ AA+ I +P ++G+Y++L+N+FA G W+D+ + R +
Sbjct: 622 AIVWRSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFASKGMWADVKKVRDR 681
Query: 560 MKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
M + K PG SWIE ++++ F A D +H R +I +++D
Sbjct: 682 MDSSEVVKEPGRSWIEVNNKVNVFIARDTTH-READIGSVLD 722
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 140/554 (25%), Positives = 244/554 (44%), Gaps = 81/554 (14%)
Query: 4 KCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWS 63
K +D+A+ VF MP ++ ++W+S+V+ + G EAL + E PN
Sbjct: 96 KSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEF--- 152
Query: 64 AVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRN 123
L+SV+ AC +L + G + HG++ R+
Sbjct: 153 --------------------------------VLASVIRACTQLGVVEKGAQLHGFVVRS 180
Query: 124 GFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELF 183
GF + +V L+D Y + G++ A +F + S K V+ TII GY + G A + ELF
Sbjct: 181 GFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELF 240
Query: 184 DQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACAD 243
QM V P + SVL AC+
Sbjct: 241 AQMRETNVV------------------------------------PDRYVVSSVLSACSM 264
Query: 244 MNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG-KM 302
+ L GK+IHA + G + D V L++ Y + + A + FD++ ++N++
Sbjct: 265 LEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMV-VKNIISWTT 323
Query: 303 KEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCG 362
G+ N + W AM+LF EM L PD + +L++C S +E+G+QVHAY I+
Sbjct: 324 MISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKAN 383
Query: 363 YDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFR 422
+SD + L+DMYAK L A+ + ++ +++S NAM+ Y+ E + F
Sbjct: 384 LESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFH 443
Query: 423 RILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY--YDVKPSLKHYTCMVDLLSR 480
+ +P+ +F + ++A + S++ G +F + + D P + + +VD+ ++
Sbjct: 444 EMRVRLQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTN--ALVDMYAK 501
Query: 481 AGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE--FGQIAADRLIELEPNNTGNYV 538
G + EA + + D V W +++ HG E G ++PN +V
Sbjct: 502 CGSIEEARKMFNS-SIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYV-TFV 559
Query: 539 MLANLFAYAGRWSD 552
+ + ++AGR D
Sbjct: 560 AVLSACSHAGRVED 573
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 121/483 (25%), Positives = 214/483 (44%), Gaps = 77/483 (15%)
Query: 85 MQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGD 144
+Q L P R +++L + K HG I +G S+ F+ N L++V
Sbjct: 40 LQIPNLRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINV------ 93
Query: 145 MLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISG 204
C+ ++ V AR +FD+M H + +I+W+SM+S
Sbjct: 94 ------------------CS-------KSDRVDNARVVFDKMPH----KNLITWSSMVSM 124
Query: 205 YVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQS 264
Y +EA +F DL + G P F SV+ AC + + KG ++H + G
Sbjct: 125 YSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQ 184
Query: 265 DTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEML 324
D +VG +L++ Y + ++ A++ FD++ + G+ + +++LF++M
Sbjct: 185 DVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMR 244
Query: 325 SLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLK 384
++ PD Y V +LSACS L +E GKQ+HAY +R G + DV + L+D Y KC +K
Sbjct: 245 ETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVK 304
Query: 385 HARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSAC- 443
R + ++ +++S M++ Y + E + F + G++PD + S L++C
Sbjct: 305 AGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCG 364
Query: 444 ----------VHAGSIKTGSE------------------------FFDLMAYYDVKPSLK 469
VHA +IK E FD+MA +V
Sbjct: 365 SREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVIS--- 421
Query: 470 HYTCMVDLLSRAGELGEAYEFIKKIPM---APDSVMWGALLGGCVSHGNLEFGQIAADRL 526
Y M++ S +L EA E ++ + P+ + AL+ + +L GQ ++L
Sbjct: 422 -YNAMIEGYSSQEKLSEALELFHEMRVRLQKPNEFTFAALITAASNLASLRHGQQFHNQL 480
Query: 527 IEL 529
+++
Sbjct: 481 VKM 483
>gi|224066769|ref|XP_002302206.1| predicted protein [Populus trichocarpa]
gi|222843932|gb|EEE81479.1| predicted protein [Populus trichocarpa]
Length = 681
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 205/635 (32%), Positives = 339/635 (53%), Gaps = 68/635 (10%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSS--------- 51
MY +CGS+ DA K+F MP R+C SWN+++ +G ++ + MS+
Sbjct: 50 MYTRCGSMTDAHKLFDEMPHRNCFSWNTMIEGYMKSGNKERSIRLFDMMSNKNDYSWNVV 109
Query: 52 ---------------LDNETPNL--VSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEP-- 92
L NE PN V W+++I + +NG EA+ + + + L+
Sbjct: 110 FSGFAKAGEMEIARRLFNEMPNRNGVVWNSMIHSYARNGSPREAVRLFKELNLDPLDKSC 169
Query: 93 -NARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKI 151
+ L++V+ AC L ++ GK+ H I + + + + L+++Y +CGD+ SA +
Sbjct: 170 CDTFVLATVIGACTDLGEIQCGKQIHARILIDNMELDSVLTSSLINLYGKCGDLDSAHCV 229
Query: 152 FSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLY 211
+ ++ S + +I GY +G + +AR F + ++ WNS+ISGYV N+
Sbjct: 230 LNTMEEPDDFSLSALITGYANHGRMNDARRAF----YRKSNSCVVVWNSLISGYVTNNEE 285
Query: 212 DEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGA 271
EAF +F D+ + G++ T ++L AC+ + + + GK++HA A +GL D V A
Sbjct: 286 IEAFLLFNDM-QKKGLKVDFSTLATILSACSSLCNSQHGKQMHAYACKVGLICDNVVASA 344
Query: 272 LVEMYCRYQDLVAAQMAFDEIENIENLL-----------GKMKEDGFE-------PNVYT 313
++ Y + L A F E++ + +L GK+ ED + ++ +
Sbjct: 345 FIDAYSKCGSLNDACKLFSELKTYDTILLNSMITVYSNSGKI-EDAKQIFNTMPSKSLIS 403
Query: 314 WNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
WN+M LF M LDL + + + ++SAC+S++++E G+Q+ A A
Sbjct: 404 WNSMIVGLSQNGCPVEALDLFCMMNKLDLRMNRFNLTSVISACASISSLELGEQIFARAT 463
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
G DSD I T+LVD Y KCG ++ R + + D +S N+ML YA +GHG E +
Sbjct: 464 VVGLDSDEVISTSLVDFYCKCGFIEIGRKLFDTMMKSDEISWNSMLMGYATNGHGLEALT 523
Query: 420 HFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLL 478
F + +G RP I+F LSAC H G +K G +F++M Y Y + P ++HY+CMVDL
Sbjct: 524 LFNEMRHAGVRPTEITFTGVLSACDHCGLVKEGWRWFNIMQYDYHIDPGIEHYSCMVDLF 583
Query: 479 SRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYV 538
+RAG L EA IK++P D+ MW ++L GC++HG + G+ A ++IEL+P N+G YV
Sbjct: 584 ARAGCLEEAMNLIKRMPFEADASMWSSVLRGCMAHGEKDLGEKVAQQIIELDPENSGAYV 643
Query: 539 MLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSW 573
L+++FA +G W A R+ M++R++ K PG SW
Sbjct: 644 QLSSIFATSGDWESSALVRKVMQERQVQKYPGYSW 678
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 122/519 (23%), Positives = 214/519 (41%), Gaps = 95/519 (18%)
Query: 90 LEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPF-VVNGLVDVYRRCGDMLSA 148
++ + + L+ L + + GK+ H + G + + + N L+ +Y RCG M A
Sbjct: 1 MDLDLQNLARFLQSLNTPHSIHQGKQLHILFFKKGLIQSTLSLANRLLQMYTRCGSMTDA 60
Query: 149 LKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLG------------------ 190
K+F + +N S NT+I GY ++GN + LFD M +
Sbjct: 61 HKLFDEMPHRNCFSWNTMIEGYMKSGNKERSIRLFDMMSNKNDYSWNVVFSGFAKAGEME 120
Query: 191 ---------VQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPT---SFTFGSVL 238
R + WNSMI Y N EA +F++L + D ++ + +F +V+
Sbjct: 121 IARRLFNEMPNRNGVVWNSMIHSYARNGSPREAVRLFKELNL-DPLDKSCCDTFVLATVI 179
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
AC D+ ++ GK+IHA + ++ D+ + +L+ +Y + DL +A + +E ++
Sbjct: 180 GACTDLGEIQCGKQIHARILIDNMELDSVLTSSLINLYGKCGDLDSAHCVLNTMEEPDDF 239
Query: 299 L-----------GKMKE--------------------DGFEPNVYTWNAMQLFSEMLSLD 327
G+M + G+ N A LF++M
Sbjct: 240 SLSALITGYANHGRMNDARRAFYRKSNSCVVVWNSLISGYVTNNEEIEAFLLFNDMQKKG 299
Query: 328 LTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHAR 387
L D T+ ILSACSSL + GKQ+HAYA + G D + +A +D Y+KCGSL A
Sbjct: 300 LKVDFSTLATILSACSSLCNSQHGKQMHAYACKVGLICDNVVASAFIDAYSKCGSLNDAC 359
Query: 388 LAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASG------------------- 428
+ + T D + N+M+T Y+ G ++ F + +
Sbjct: 360 KLFSELKTYDTILLNSMITVYSNSGKIEDAKQIFNTMPSKSLISWNSMIVGLSQNGCPVE 419
Query: 429 ------------FRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVD 476
R + + S +SAC S++ G + F + T +VD
Sbjct: 420 ALDLFCMMNKLDLRMNRFNLTSVISACASISSLELGEQIFARATVVGLDSDEVISTSLVD 479
Query: 477 LLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
+ G + + + M D + W ++L G ++G+
Sbjct: 480 FYCKCGFIEIGRKLFDTM-MKSDEISWNSMLMGYATNGH 517
>gi|224141479|ref|XP_002324099.1| predicted protein [Populus trichocarpa]
gi|222867101|gb|EEF04232.1| predicted protein [Populus trichocarpa]
Length = 676
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 190/527 (36%), Positives = 302/527 (57%), Gaps = 9/527 (1%)
Query: 71 QNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPF 130
Q +EA+ +L ++ +P+A S+++ +C + + L GK+ H +I +GF+ F
Sbjct: 51 QQNRLKEALQILHQID----KPSASVYSTLIQSCIKSRLLQQGKKVHQHIKLSGFVPGLF 106
Query: 131 VVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLG 190
++N L+++Y +C ++ + K+F + ++ S N +I GY + G + EA+ LFD+M
Sbjct: 107 ILNRLLEMYAKCDSLMDSQKLFDEMPERDLCSWNILISGYAKMGLLQEAKSLFDKMP--- 163
Query: 191 VQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKG 250
+R SW +MISGYV + +EA +FR + D + FT S L A A + LR G
Sbjct: 164 -ERDNFSWTAMISGYVRHDRPNEALELFRMMKRSDNSKSNKFTVSSALAAAAAVPCLRIG 222
Query: 251 KEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPN 310
KEIH + GL SD V AL +MY + + A+ FD++ + + + D + +
Sbjct: 223 KEIHGYIMRTGLDSDEVVWSALSDMYGKCGSIEEARHIFDKMVDRDIVTWTAMIDRYFQD 282
Query: 311 VYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIG 370
LF+++L + P+ +T +L+AC++ + E GK+VH Y R G+D
Sbjct: 283 GRRKEGFDLFADLLRSGIRPNEFTFSGVLNACANQTSEELGKKVHGYMTRVGFDPFSFAA 342
Query: 371 TALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFR 430
+ALV MY+KCG++ A +K PDL S +++ YA +G E I +F ++ SG +
Sbjct: 343 SALVHMYSKCGNMVSAERVFKETPQPDLFSWTSLIAGYAQNGQPDEAIRYFELLVKSGTQ 402
Query: 431 PDHISFLSALSACVHAGSIKTGSEFF-DLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYE 489
PDHI+F+ LSAC HAG + G ++F + Y + + HY C++DLL+R+G+ EA
Sbjct: 403 PDHITFVGVLSACAHAGLVDKGLDYFHSIKEQYGLTHTADHYACIIDLLARSGQFDEAEN 462
Query: 490 FIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGR 549
I K+ M PD +W +LLGGC HGNL+ Q AA+ L E+EP N YV LAN++A AG
Sbjct: 463 IISKMSMKPDKFLWASLLGGCRIHGNLKLAQRAAEALFEIEPENPATYVTLANIYATAGM 522
Query: 550 WSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEI 596
WS++A+ R+ M DR + K PG SWI + ++H F D SH +S+EI
Sbjct: 523 WSEVAKIRKTMDDRGVVKKPGLSWIAIKRDVHVFLVGDDSHPKSKEI 569
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 126/419 (30%), Positives = 193/419 (46%), Gaps = 46/419 (10%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC SL D++K+F MPERD SWN +++ A GL+ EA ++M DN
Sbjct: 114 MYAKCDSLMDSQKLFDEMPERDLCSWNILISGYAKMGLLQEAKSLFDKMPERDN-----F 168
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRM--QAEGLEPNARTLSSVLPACARLQKLSLGKEFHG 118
SW+A+I G+ ++ EA+ LFRM +++ + N T+SS L A A + L +GKE HG
Sbjct: 169 SWTAMISGYVRHDRPNEALE-LFRMMKRSDNSKSNKFTVSSALAAAAAVPCLRIGKEIHG 227
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
YI R G S+ V + L D+Y +CG + A IF K ++ V+ +I Y ++G
Sbjct: 228 YIMRTGLDSDEVVWSALSDMYGKCGSIEEARHIFDKMVDRDIVTWTAMIDRYFQDGR--- 284
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
E F +F DLL R GI P FTF VL
Sbjct: 285 --------------------------------RKEGFDLFADLL-RSGIRPNEFTFSGVL 311
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
ACA+ S GK++H +G +F ALV MY + ++V+A+ F E +
Sbjct: 312 NACANQTSEELGKKVHGYMTRVGFDPFSFAASALVHMYSKCGNMVSAERVFKETPQPDLF 371
Query: 299 LGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG-KQVHAY 357
G+ N A++ F ++ PD T +LSAC+ +++G H+
Sbjct: 372 SWTSLIAGYAQNGQPDEAIRYFELLVKSGTQPDHITFVGVLSACAHAGLVDKGLDYFHSI 431
Query: 358 AIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNAMLTAYAMHGHGK 415
+ G ++D+ A+ G A ++S PD ++L +HG+ K
Sbjct: 432 KEQYGLTHTADHYACIIDLLARSGQFDEAENIISKMSMKPDKFLWASLLGGCRIHGNLK 490
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 137/297 (46%), Gaps = 41/297 (13%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKCGS+++A+ +F M +RD +V
Sbjct: 247 MYGKCGSIEEARHIFDKMVDRD------------------------------------IV 270
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+A+I + Q+G +E + + G+ PN T S VL ACA LGK+ HGY+
Sbjct: 271 TWTAMIDRYFQDGRRKEGFDLFADLLRSGIRPNEFTFSGVLNACANQTSEELGKKVHGYM 330
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
TR GF F + LV +Y +CG+M+SA ++F + + S ++I GY +NG EA
Sbjct: 331 TRVGFDPFSFAASALVHMYSKCGNMVSAERVFKETPQPDLFSWTSLIAGYAQNGQPDEAI 390
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
F+ + G Q I++ ++S L D+ F + + G+ T+ + ++
Sbjct: 391 RYFELLVKSGTQPDHITFVGVLSACAHAGLVDKGLDYFHSIKEQYGLTHTADHYACIIDL 450
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCR-YQDLVAAQMAFDEIENIE 296
A + + I + + ++ D F+ +L+ CR + +L AQ A + + IE
Sbjct: 451 LARSGQFDEAENIIS---KMSMKPDKFLWASLLGG-CRIHGNLKLAQRAAEALFEIE 503
>gi|449461160|ref|XP_004148310.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g18840-like [Cucumis
sativus]
Length = 1096
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 206/637 (32%), Positives = 347/637 (54%), Gaps = 47/637 (7%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
Y K G L+DA+K+F MPER+ SWN+++ A + + +A + D LV
Sbjct: 455 FYAKHGLLNDAQKLFDEMPERNVFSWNAIIAAYVKSHNLRQARALFDSAVCKD-----LV 509
Query: 61 SWSAVIGGFTQ-NGYDEEAIGMLFRMQA--EGLEPNARTLSSVLPACARLQKLSLGKEFH 117
++++++ G+ + +GY +A+G MQ + + + TL ++L A+L +S GK+ H
Sbjct: 510 TYNSMLSGYARSDGYQGQALGFFMEMQTAPDMIRIDEFTLITMLNLTAKLCVISYGKQLH 569
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKF-SIKNEVSCNTIIVGYCENGNV 176
++ + F + L+D+Y +CG A +++ + + VS N ++ C G +
Sbjct: 570 SFMLKTANDLTVFAASSLIDMYSKCGFFKEACRVYYGCGEVVDSVSRNAMVAACCREGEI 629
Query: 177 AEARELF-DQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFG 235
A +LF ++E Q +++WN+MISG+V N +E+ +F + + + TF
Sbjct: 630 DVALDLFWKELE----QNDVVAWNTMISGFVQNGYEEESLKLFVRM-ADEKVGWNEHTFA 684
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYC-----RYQDLVAAQMAFD 290
SVL AC+++ SL+ GKE+HA + L ++ F+ LV++YC RY V +++
Sbjct: 685 SVLSACSNLRSLKLGKEVHAYVLKNRLIANPFICSGLVDVYCKCNNMRYAKSVNSELRMQ 744
Query: 291 EIENIENLL------GKMKE-----DGF-EPNVYTWNAM--------------QLFSEML 324
+ +I +++ G M E D E N W A+ +L SE
Sbjct: 745 NVYSITSMIVGYSSQGNMAEARKLFDSLDEKNSAVWTALFFGYVKLQQCEAVFELLSEYR 804
Query: 325 SLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLK 384
PD+ + I+ AC+ A + GKQ+H+Y +R G D + ++LVDMY+KCGS+
Sbjct: 805 KEAKVPDVLILISIIGACAIQAALVPGKQIHSYMLRAGIKLDTKLTSSLVDMYSKCGSII 864
Query: 385 HARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACV 444
+A ++ ++ D + N M+ YA HG E + F+ ++ GF+PD I+F++ LSAC
Sbjct: 865 YAERIFREVTDKDSIIYNIMIAGYAHHGWENEAVQLFKEMVKHGFKPDAITFVALLSACR 924
Query: 445 HAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMW 503
H G ++ G FFD M+ Y++ P + HY CM+DL RA +L +A EF++KIP+ D+V+W
Sbjct: 925 HGGLVELGEHFFDSMSNDYNICPEIDHYACMIDLYGRANQLDKALEFMRKIPIQLDAVIW 984
Query: 504 GALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDR 563
GA L C +GN E + A D L+ +E N YV LAN++A G W ++ R R+KMK +
Sbjct: 985 GAFLNACRINGNAELARKAEDELLVIEGENGSRYVQLANVYAAEGNWEEMGRIRKKMKGK 1044
Query: 564 RMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTII 600
+ K+ GCSW+ + H F + DR H ++E IY+ +
Sbjct: 1045 EVKKNAGCSWVFVESKFHVFISGDRFHSKNEAIYSTL 1081
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 107/459 (23%), Positives = 200/459 (43%), Gaps = 71/459 (15%)
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
++GF F+ N L+ Y + G + A K+F + +N S N II Y ++ N+ +AR
Sbjct: 439 KSGFTPTIFMSNQLITFYAKHGLLNDAQKLFDEMPERNVFSWNAIIAAYVKSHNLRQARA 498
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYD-EAFSMFRDL-LMRDGIEPTSFTFGSVLI 239
LFD V + ++++NSM+SGY + Y +A F ++ D I FT ++L
Sbjct: 499 LFDS----AVCKDLVTYNSMLSGYARSDGYQGQALGFFMEMQTAPDMIRIDEFTLITMLN 554
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMY----------------------- 276
A + + GK++H+ + F +L++MY
Sbjct: 555 LTAKLCVISYGKQLHSFMLKTANDLTVFAASSLIDMYSKCGFFKEACRVYYGCGEVVDSV 614
Query: 277 ---------CRYQDL-VAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSL 326
CR ++ VA + + E+E + + GF N Y +++LF M
Sbjct: 615 SRNAMVAACCREGEIDVALDLFWKELEQNDVVAWNTMISGFVQNGYEEESLKLFVRMADE 674
Query: 327 DLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHA 386
+ + +T +LSACS+L +++ GK+VHAY ++ ++ I + LVD+Y KC ++++A
Sbjct: 675 KVGWNEHTFASVLSACSNLRSLKLGKEVHAYVLKNRLIANPFICSGLVDVYCKCNNMRYA 734
Query: 387 RLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRI---------------------- 424
+ + ++ S +M+ Y+ G+ E F +
Sbjct: 735 KSVNSELRMQNVYSITSMIVGYSSQGNMAEARKLFDSLDEKNSAVWTALFFGYVKLQQCE 794
Query: 425 ----LASGFR-----PDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMV 475
L S +R PD + +S + AC ++ G + M +K K + +V
Sbjct: 795 AVFELLSEYRKEAKVPDVLILISIIGACAIQAALVPGKQIHSYMLRAGIKLDTKLTSSLV 854
Query: 476 DLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
D+ S+ G + A +++ DS+++ ++ G HG
Sbjct: 855 DMYSKCGSIIYAERIFREV-TDKDSIIYNIMIAGYAHHG 892
>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 1227
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 198/605 (32%), Positives = 332/605 (54%), Gaps = 47/605 (7%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAA----NGLVLEALECLERMSSLDNETP 57
+ G + + K++ + + S+N+VV + A +G V A + + + D
Sbjct: 563 FATLGRVGECKRIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRD---- 618
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
+VSW+++I G NG+ A+ +M + + TL + + ACA + LSLG+ H
Sbjct: 619 -VVSWNSMISGCVMNGFSHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALH 677
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
G + F N L+D+Y +CG N+
Sbjct: 678 GQGVKACFSREVMFNNTLLDMYSKCG-------------------------------NLN 706
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
+A + F++M Q+ ++SW S+I+ YV LYD+A +F ++ + G+ P ++ SV
Sbjct: 707 DAIQAFEKMG----QKTVVSWTSLIAAYVREGLYDDAIRLFYEMESK-GVSPDVYSMTSV 761
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
L ACA NSL KG+++H + V AL++MY + + A + F +I +
Sbjct: 762 LHACACGNSLDKGRDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAYLVFSQIPVKDI 821
Query: 298 LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAY 357
+ G+ N A++LF+EM + PD T+ +L AC SLA +E G+ +H
Sbjct: 822 VSWNTMIGGYSKNSLPNEALKLFAEMQK-ESRPDGITMACLLPACGSLAALEIGRGIHGC 880
Query: 358 AIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEG 417
+R GY S++H+ AL+DMY KCGSL HARL + I DL++ M++ MHG G E
Sbjct: 881 ILRNGYSSELHVANALIDMYVKCGSLVHARLLFDMIPEKDLITWTVMISGCGMHGLGNEA 940
Query: 418 IAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFD-LMAYYDVKPSLKHYTCMVD 476
IA F+++ +G +PD I+F S L AC H+G + G FF+ +++ +++P L+HY CMVD
Sbjct: 941 IATFQKMRIAGIKPDEITFTSILYACSHSGLLNEGWGFFNSMISECNMEPKLEHYACMVD 1000
Query: 477 LLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGN 536
LL+R G L +AY I+ +P+ PD+ +WGALL GC H ++E + A+ + ELEP+N G
Sbjct: 1001 LLARTGNLSKAYNLIETMPIKPDATIWGALLCGCRIHHDVELAEKVAEHVFELEPDNAGY 1060
Query: 537 YVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEI 596
YV+LAN++A A +W ++ + R+++ R + KSPGCSWIE + + F ++D +H +++ I
Sbjct: 1061 YVLLANIYAEAEKWEEVKKLRERIGKRGLKKSPGCSWIEVQGKFTTFVSADTAHPQAKSI 1120
Query: 597 YTIID 601
+++++
Sbjct: 1121 FSLLN 1125
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 115/444 (25%), Positives = 201/444 (45%), Gaps = 38/444 (8%)
Query: 66 IGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGF 125
I F + G A+ +L Q L+ NA SS+L CA + L GK H I+ NG
Sbjct: 425 ICKFCEVGDLRNAVELLRMSQKSELDLNA--YSSILQLCAEHKCLQEGKMVHSVISSNGI 482
Query: 126 MSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQ 185
+ LV +Y CG AL+ E R +FD
Sbjct: 483 PIEGVLGAKLVFMYVSCG----ALR---------------------------EGRRIFD- 510
Query: 186 MEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMN 245
H+ + WN M+S Y Y E+ +F+ + + GI S+TF +L A +
Sbjct: 511 --HILSDNKVFLWNLMMSEYAKIGDYRESIYLFKKM-QKLGITGNSYTFSCILKCFATLG 567
Query: 246 SLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKED 305
+ + K IH LG S V +L+ Y + ++ +A FDE+ + + +
Sbjct: 568 RVGECKRIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMIS 627
Query: 306 GFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDS 365
G N ++ +A++ F +ML L + D+ T+ ++AC+++ ++ G+ +H ++ +
Sbjct: 628 GCVMNGFSHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFSR 687
Query: 366 DVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRIL 425
+V L+DMY+KCG+L A A++++ +VS +++ AY G + I F +
Sbjct: 688 EVMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEME 747
Query: 426 ASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELG 485
+ G PD S S L AC S+ G + + + ++ L ++D+ ++ G +
Sbjct: 748 SKGVSPDVYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVSNALMDMYAKCGSME 807
Query: 486 EAYEFIKKIPMAPDSVMWGALLGG 509
EAY +IP+ D V W ++GG
Sbjct: 808 EAYLVFSQIPV-KDIVSWNTMIGG 830
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 109/416 (26%), Positives = 173/416 (41%), Gaps = 81/416 (19%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG+L+DA + F+ M ++ VSW S++ A
Sbjct: 698 MYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAA---------------------------- 729
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+ + G ++AI + + M+++G+ P+ +++SVL ACA L G++ H YI
Sbjct: 730 --------YVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNYI 781
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+N V N L+D+Y +CG M A +FS+ +K+ VS NT+I GY +N EA
Sbjct: 782 RKNNMALCLPVSNALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPNEAL 841
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+LF +M+ P T +L A
Sbjct: 842 KLFAEMQKES-------------------------------------RPDGITMACLLPA 864
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C + +L G+ IH + G S+ V AL++MY + LV A++ FD I + +
Sbjct: 865 CGSLAALEIGRGIHGCILRNGYSSELHVANALIDMYVKCGSLVHARLLFDMIPEKDLITW 924
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI- 359
+ G + A+ F +M + PD T IL ACS + G I
Sbjct: 925 TVMISGCGMHGLGNEAIATFQKMRIAGIKPDEITFTSILYACSHSGLLNEGWGFFNSMIS 984
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST----PDLVSQNAMLTAYAMH 411
C + + +VD+ A+ G+L AY I T PD A+L +H
Sbjct: 985 ECNMEPKLEHYACMVDLLARTGNLSK---AYNLIETMPIKPDATIWGALLCGCRIH 1037
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 137/297 (46%), Gaps = 42/297 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGS+++A VF +P +D VSWN+++
Sbjct: 799 MYAKCGSMEEAYLVFSQIPVKDIVSWNTMI------------------------------ 828
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
GG+++N EA+ + MQ E P+ T++ +LPAC L L +G+ HG I
Sbjct: 829 ------GGYSKNSLPNEALKLFAEMQKES-RPDGITMACLLPACGSLAALEIGRGIHGCI 881
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
RNG+ S V N L+D+Y +CG ++ A +F K+ ++ +I G +G EA
Sbjct: 882 LRNGYSSELHVANALIDMYVKCGSLVHARLLFDMIPEKDLITWTVMISGCGMHGLGNEAI 941
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
F +M G++ I++ S++ + L +E + F ++ +EP + ++
Sbjct: 942 ATFQKMRIAGIKPDEITFTSILYACSHSGLLNEGWGFFNSMISECNMEPKLEHYACMVDL 1001
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCR-YQDLVAAQMAFDEIENIE 296
A +L K + L + ++ D + GAL+ CR + D+ A+ + + +E
Sbjct: 1002 LARTGNLSKA---YNLIETMPIKPDATIWGALL-CGCRIHHDVELAEKVAEHVFELE 1054
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 92/213 (43%), Gaps = 16/213 (7%)
Query: 315 NAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALV 374
NA++L +L + Y+ IL C+ ++ GK VH+ G + +G LV
Sbjct: 436 NAVELLRMSQKSELDLNAYSS--ILQLCAEHKCLQEGKMVHSVISSNGIPIEGVLGAKLV 493
Query: 375 DMYAKCGSLKHARLAYKRISTPDLVS-QNAMLTAYAMHGHGKEGIAHFRRILASGFRPDH 433
MY CG+L+ R + I + + V N M++ YA G +E I F+++ G +
Sbjct: 494 FMYVSCGALREGRRIFDHILSDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNS 553
Query: 434 ISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLS----RAGELGEAYE 489
+F L G + + K Y +V+ L ++GE+ A++
Sbjct: 554 YTFSCILKCFATLGRVGECKRIHGCV----YKLGFGSYNTVVNSLIATYFKSGEVDSAHK 609
Query: 490 FIKKIPMAPDSVMWGALLGGCV----SHGNLEF 518
++ D V W +++ GCV SH LEF
Sbjct: 610 LFDELG-DRDVVSWNSMISGCVMNGFSHSALEF 641
>gi|225444173|ref|XP_002268853.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Vitis vinifera]
Length = 853
Score = 358 bits (920), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 202/598 (33%), Positives = 310/598 (51%), Gaps = 73/598 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG L DA+++F MMP+ D LV
Sbjct: 292 MYAKCGHLFDARRLFDMMPKTD------------------------------------LV 315
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+ +I G+ QNG+ +EA + M + ++P++ T SS LP + L GKE H YI
Sbjct: 316 TWNGMISGYVQNGFMDEASCLFHEMISARMKPDSITFSSFLPLLSEGATLRQGKEIHCYI 375
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
RNG + F+ + L+D+Y +C D V AR
Sbjct: 376 IRNGVSLDVFLKSALIDIYFKCRD-------------------------------VEMAR 404
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
++FDQ + I+ +MISGYV N + + A +FR L+++ + S T SVL A
Sbjct: 405 KIFDQRTPVD----IVVCTAMISGYVLNGMNNNALEIFR-WLLQERMRANSVTLASVLPA 459
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA + +L GKE+H + G +VG A+++MY + L A F I + + +
Sbjct: 460 CAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCW 519
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
N A+ LF +M D ++ LSAC++L + GK++HA+ +R
Sbjct: 520 NSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMR 579
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
+ SD+ +AL+DMY+KCG+L A + + + VS N+++ AY HG K+ +
Sbjct: 580 GAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNL 639
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLS 479
F +L G +PDH++FL+ +SAC HAG + G +F M + ++HY CMVDL
Sbjct: 640 FHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARMEHYACMVDLFG 699
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
RAG L EA+ I +P +PD+ +WG LLG C HGN+E ++A+ L +L+P N+G YV+
Sbjct: 700 RAGRLNEAFGMINSMPFSPDAGVWGTLLGACRLHGNVELAEVASRNLFDLDPQNSGYYVL 759
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
L+N+ A AG+W + + R MK+R + K PGCSWI+ + H F A+DRSH +S +IY
Sbjct: 760 LSNVHANAGQWESVLKIRSLMKERGVQKVPGCSWIDVNNTTHMFVAADRSHPQSSQIY 817
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 139/520 (26%), Positives = 248/520 (47%), Gaps = 49/520 (9%)
Query: 5 CGSLDDAK-------KVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETP 57
CG L+ K+ M E D +S++ + NG + +A +RM S D
Sbjct: 157 CGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDG--- 213
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
V W+ ++ G+ +NG + A G+ M+ PN+ T + VL CA ++ G + H
Sbjct: 214 --VLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLH 271
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
G + +G + V N L+ +Y +CG + A ++F + V+ N +I GY +NG +
Sbjct: 272 GLVVSSGLEMDSPVANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMD 331
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
EA LF +M + ++P S TF S
Sbjct: 332 EASCLFHEM------------------------------------ISARMKPDSITFSSF 355
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
L ++ +LR+GKEIH I G+ D F+ AL+++Y + +D+ A+ FD+ ++
Sbjct: 356 LPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMARKIFDQRTPVDI 415
Query: 298 LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAY 357
++ G+ N NA+++F +L + + T+ +L AC+ LA + GK++H +
Sbjct: 416 VVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGH 475
Query: 358 AIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEG 417
++ G+ ++G+A++DMYAKCG L A + IS D V N+M+T+ + +G +E
Sbjct: 476 ILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEA 535
Query: 418 IAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDL 477
I FR++ +G + D +S +ALSAC + ++ G E M + L + ++D+
Sbjct: 536 IDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDM 595
Query: 478 LSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
S+ G L A + + V W +++ +HG L+
Sbjct: 596 YSKCGNLDLACRVFDTME-EKNEVSWNSIIAAYGNHGRLK 634
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 131/456 (28%), Positives = 212/456 (46%), Gaps = 37/456 (8%)
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W+ +I GFT G + A+ F+M G P+ T V+ AC L ++LG+ H I
Sbjct: 115 WNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHDKIQ 174
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
GF + FV + L+ KF Y ENG + +AR
Sbjct: 175 FMGFELDVFVGSSLI-----------------KF--------------YSENGCIHDARY 203
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
LFD+M + G++ WN M++GYV N +D A +F ++ R P S TF VL C
Sbjct: 204 LFDRMPS---KDGVL-WNVMLNGYVKNGDWDNATGVFMEM-RRTETNPNSVTFACVLSVC 258
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK 301
A + G ++H L ++ GL+ D+ V L+ MY + L A+ FD + + +
Sbjct: 259 ASEIMINFGSQLHGLVVSSGLEMDSPVANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWN 318
Query: 302 MKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRC 361
G+ N + A LF EM+S + PD T L S AT+ +GK++H Y IR
Sbjct: 319 GMISGYVQNGFMDEASCLFHEMISARMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRN 378
Query: 362 GYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHF 421
G DV + +AL+D+Y KC ++ AR + + + D+V AM++ Y ++G + F
Sbjct: 379 GVSLDVFLKSALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIF 438
Query: 422 RRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRA 481
R +L R + ++ S L AC ++ G E + S + ++D+ ++
Sbjct: 439 RWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKC 498
Query: 482 GELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
G L A++ I D+V W +++ C +G E
Sbjct: 499 GRLDLAHQTFIGIS-DKDAVCWNSMITSCSQNGKPE 533
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 124/282 (43%), Gaps = 1/282 (0%)
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
S+L C D + L +G++ HA + G+ + +G L+ MY + A+ F ++
Sbjct: 51 SILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLW 110
Query: 296 ENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVH 355
+ GF A+ + +ML PD YT ++ AC L ++ G+ VH
Sbjct: 111 CSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVH 170
Query: 356 AYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGK 415
G++ DV +G++L+ Y++ G + AR + R+ + D V N ML Y +G
Sbjct: 171 DKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWD 230
Query: 416 EGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMV 475
F + + P+ ++F LS C I GS+ L+ ++ ++
Sbjct: 231 NATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTLL 290
Query: 476 DLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
+ ++ G L +A +P D V W ++ G V +G ++
Sbjct: 291 AMYAKCGHLFDARRLFDMMP-KTDLVTWNGMISGYVQNGFMD 331
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 91/209 (43%), Gaps = 6/209 (2%)
Query: 328 LTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHAR 387
L P + + IL C+ + + +G+Q HA + G + +GT L+ MY CG+ A+
Sbjct: 45 LAPQLVS---ILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAK 101
Query: 388 LAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAG 447
+ ++ N M+ + M G + + ++L G PD +F + AC
Sbjct: 102 NIFYQLRLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLN 161
Query: 448 SIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALL 507
S+ G D + + + + + ++ S G + +A ++P + D V+W +L
Sbjct: 162 SVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMP-SKDGVLWNVML 220
Query: 508 GGCVSHGNLE--FGQIAADRLIELEPNNT 534
G V +G+ + G R E PN+
Sbjct: 221 NGYVKNGDWDNATGVFMEMRRTETNPNSV 249
>gi|356503988|ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 771
Score = 358 bits (918), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 204/623 (32%), Positives = 324/623 (52%), Gaps = 84/623 (13%)
Query: 3 GKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALEC------LERMSSLDNET 56
K SL A ++ + V+ N+ + N L+L +C L ++ + +
Sbjct: 108 AKLKSLKHATQIHSQL-----VTTNNHASLANINTLLLLYAKCGSIHHTLLLFNTYPHPS 162
Query: 57 PNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEF 116
N+V+W+ +I +++ +A+ RM+ G+ PN T S++LPACA LS G++
Sbjct: 163 TNVVTWTTLINQLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEGQQI 222
Query: 117 HGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNV 176
H I ++ F+++PFV L+D+Y +CG ML A EN
Sbjct: 223 HALIHKHCFLNDPFVATALLDMYAKCGSMLLA-----------------------EN--- 256
Query: 177 AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGS 236
+FD+M H R ++SWNSMI G+V N LY A +FR++L + P + S
Sbjct: 257 -----VFDEMPH----RNLVSWNSMIVGFVKNKLYGRAIGVFREVL---SLGPDQVSISS 304
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCR---YQDLVAAQMAFDEIE 293
VL ACA + L GK++H + GL +V +LV+MYC+ ++D
Sbjct: 305 VLSACAGLVELDFGKQVHGSIVKRGLVGLVYVKNSLVDMYCKCGLFEDAT---------- 354
Query: 294 NIENLLGKMKEDGFEPNVYTWNAMQL--------------FSEMLSLDLTPDIYTVGIIL 339
K+ G + +V TWN M + F M+ + PD + +
Sbjct: 355 -------KLFCGGGDRDVVTWNVMIMGCFRCRNFEQACTYFQAMIREGVEPDEASYSSLF 407
Query: 340 SACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLV 399
A +S+A + +G +H++ ++ G+ + I ++LV MY KCGS+ A ++ ++V
Sbjct: 408 HASASIAALTQGTMIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAYQVFRETKEHNVV 467
Query: 400 SQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM 459
AM+T + HG E I F +L G P++I+F+S LSAC H G I G ++F+ M
Sbjct: 468 CWTAMITVFHQHGCANEAIKLFEEMLNEGVVPEYITFVSVLSACSHTGKIDDGFKYFNSM 527
Query: 460 A-YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEF 518
A +++KP L+HY CMVDLL R G L EA FI+ +P PDS++WGALLG C H N+E
Sbjct: 528 ANVHNIKPGLEHYACMVDLLGRVGRLEEACRFIESMPFEPDSLVWGALLGACGKHANVEM 587
Query: 519 GQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRD 578
G+ A+RL +LEP+N GNY++L+N++ G + R+ M + K GCSWI+ ++
Sbjct: 588 GREVAERLFKLEPDNPGNYMLLSNIYIRHGMLEEADEVRRLMGINGVRKESGCSWIDVKN 647
Query: 579 EIHKFRASDRSHDRSEEIYTIID 601
F A+DRSH R++EIY ++
Sbjct: 648 RTFVFNANDRSHSRTQEIYGMLQ 670
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 116/433 (26%), Positives = 182/433 (42%), Gaps = 104/433 (24%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGS+ A+ VF MP R+ VSWNS++
Sbjct: 244 MYAKCGSMLLAENVFDEMPHRNLVSWNSMIV----------------------------- 274
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
GF +N AIG +FR + L P+ ++SSVL ACA L +L GK+ HG I
Sbjct: 275 -------GFVKNKLYGRAIG-VFR-EVLSLGPDQVSISSVLSACAGLVELDFGKQVHGSI 325
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G + +V N LVD+Y +CG A K+F C G+
Sbjct: 326 VKRGLVGLVYVKNSLVDMYCKCGLFEDATKLF------------------CGGGD----- 362
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
R +++WN MI G +++A + F+ ++ R+G+EP ++ S+ A
Sbjct: 363 ------------RDVVTWNVMIMGCFRCRNFEQACTYFQAMI-REGVEPDEASYSSLFHA 409
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
A + +L +G IH+ + G ++ + +LV MY + ++ A F E +
Sbjct: 410 SASIAALTQGTMIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAYQVFRETK------- 462
Query: 301 KMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSSLA 346
E NV W AM +LF EML+ + P+ T +LSACS
Sbjct: 463 -------EHNVVCWTAMITVFHQHGCANEAIKLFEEMLNEGVVPEYITFVSVLSACSHTG 515
Query: 347 TMERG-KQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHA-RLAYKRISTPDLVSQNAM 404
++ G K ++ A + +VD+ + G L+ A R PD + A+
Sbjct: 516 KIDDGFKYFNSMANVHNIKPGLEHYACMVDLLGRVGRLEEACRFIESMPFEPDSLVWGAL 575
Query: 405 LTAYAMHGHGKEG 417
L A H + + G
Sbjct: 576 LGACGKHANVEMG 588
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 81/176 (46%), Gaps = 3/176 (1%)
Query: 338 ILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTP- 396
+L+ + L +++ Q+H+ + + + L+ +YAKCGS+ H L + P
Sbjct: 103 LLNNAAKLKSLKHATQIHSQLVTTNNHASLANINTLLLLYAKCGSIHHTLLLFNTYPHPS 162
Query: 397 -DLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEF 455
++V+ ++ + + + F R+ +G P+H +F + L AC HA + G +
Sbjct: 163 TNVVTWTTLINQLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEGQQI 222
Query: 456 FDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCV 511
L+ + T ++D+ ++ G + A ++P + V W +++ G V
Sbjct: 223 HALIHKHCFLNDPFVATALLDMYAKCGSMLLAENVFDEMPHR-NLVSWNSMIVGFV 277
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 62/150 (41%), Gaps = 38/150 (25%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWN--------------------------------- 27
MYGKCGS+ DA +VF+ E + V W
Sbjct: 444 MYGKCGSMLDAYQVFRETKEHNVVCWTAMITVFHQHGCANEAIKLFEEMLNEGVVPEYIT 503
Query: 28 --SVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRM 85
SV++AC+ G + + + M+++ N P L ++ ++ + G EEA + M
Sbjct: 504 FVSVLSACSHTGKIDDGFKYFNSMANVHNIKPGLEHYACMVDLLGRVGRLEEACRFIESM 563
Query: 86 QAEGLEPNARTLSSVLPACARLQKLSLGKE 115
EP++ ++L AC + + +G+E
Sbjct: 564 P---FEPDSLVWGALLGACGKHANVEMGRE 590
>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 705
Score = 358 bits (918), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 194/601 (32%), Positives = 321/601 (53%), Gaps = 73/601 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC ++DA+ +F M ERD LV
Sbjct: 74 MYVKCREIEDARFLFDKMQERD------------------------------------LV 97
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+ +IGG+ + G E++ + +M+ EG+ P+ + +V+ ACA+L + + YI
Sbjct: 98 TWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYI 157
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R F + + ++D+Y +CG V AR
Sbjct: 158 QRKKFQLDVILGTAMIDMYAKCG-------------------------------CVESAR 186
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
E+FD+ME ++ +ISW++MI+ Y + +A +FR +++ G+ P T S+L A
Sbjct: 187 EIFDRME----EKNVISWSAMIAAYGYHGQGRKALDLFR-MMLSSGMLPDKITLASLLYA 241
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C+D+ +L+ G+ IH + GL D FV ALV+MY + +++ A+ FD++ + +
Sbjct: 242 CSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLVTW 301
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
+ G+ ++ LF +M + PD + ++ AC+ L M + + + Y R
Sbjct: 302 TVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQR 361
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
+ DV +GTA++DM+AKCG ++ AR + R+ +++S +AM+ AY HG G++ +
Sbjct: 362 KKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDL 421
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMVDLLS 479
F +L SG P+ I+ +S L AC HAG ++ G FF LM Y V+ +KHYTC+VDLL
Sbjct: 422 FPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLG 481
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
RAG L EA + I+ + + D +WGA LG C +H ++ + AA L+EL+P N G+Y++
Sbjct: 482 RAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQNPGHYIL 541
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTI 599
L+N++A AGRW D+A+TR M RR+ K PG +WIE ++ H+F D +H RS+EIY +
Sbjct: 542 LSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEM 601
Query: 600 I 600
+
Sbjct: 602 L 602
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 116/465 (24%), Positives = 204/465 (43%), Gaps = 65/465 (13%)
Query: 65 VIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNG 124
++GGF + G G + G P+ TL V+ AC L+ L +G+ H + + G
Sbjct: 1 MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 60
Query: 125 FMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFD 184
+ FV LVD+Y +C + + +AR LFD
Sbjct: 61 LDLDHFVCAALVDMYVKCRE-------------------------------IEDARFLFD 89
Query: 185 QMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADM 244
+M+ +R +++W MI GY + +E+ +F + +G+ P +V+ ACA +
Sbjct: 90 KMQ----ERDLVTWTVMIGGYAECGKANESLVLFEK-MREEGVVPDKVAMVTVVFACAKL 144
Query: 245 NSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKE 304
++ K + I Q D +G A+++MY + + +A+ FD +E
Sbjct: 145 GAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRME----------- 193
Query: 305 DGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSSLATMER 350
E NV +W+AM LF MLS + PD T+ +L ACS L ++
Sbjct: 194 ---EKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQM 250
Query: 351 GKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAM 410
G+ +H + G D D + ALVDMY KC ++ AR + ++ DLV+ M+ YA
Sbjct: 251 GRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLVTWTVMIGGYAE 310
Query: 411 HGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKH 470
G+ E + F ++ G PD ++ ++ + AC G++ D + + +
Sbjct: 311 CGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVIL 370
Query: 471 YTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
T M+D+ ++ G + A E ++ + + W A++ HG
Sbjct: 371 GTAMIDMHAKCGCVESAREIFDRME-EKNVISWSAMIAAYGYHGQ 414
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 104/349 (29%), Positives = 178/349 (51%), Gaps = 7/349 (2%)
Query: 201 MISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIAL 260
M+ G+ Y F FR+L+ R G P ++T V+ AC D+ +L+ G+ IH +
Sbjct: 1 MVGGFAKVGDYINCFGTFRELI-RCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKF 59
Query: 261 GLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLF 320
GL D FV ALV+MY + +++ A+ FD+++ + + + G+ ++ LF
Sbjct: 60 GLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLF 119
Query: 321 SEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKC 380
+M + PD + ++ AC+ L M + + + Y R + DV +GTA++DMYAKC
Sbjct: 120 EKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKC 179
Query: 381 GSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSAL 440
G ++ AR + R+ +++S +AM+ AY HG G++ + FR +L+SG PD I+ S L
Sbjct: 180 GCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLL 239
Query: 441 SACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTC--MVDLLSRAGELGEAYEFIKKIPMAP 498
AC +++ G ++ Y L H+ C +VD+ + E+ +A K+P
Sbjct: 240 YACSDLKNLQMGRLIHHIV--YKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMP-ER 296
Query: 499 DSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYA 547
D V W ++GG GN + D++ E E M+ +FA A
Sbjct: 297 DLVTWTVMIGGYAECGNANESLVLFDKMRE-EGVVPDKVAMVTVVFACA 344
>gi|297743099|emb|CBI35966.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 357 bits (917), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 189/558 (33%), Positives = 316/558 (56%), Gaps = 33/558 (5%)
Query: 56 TPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKE 115
+P SW+++I +T +G + ++ + +M +P+ T VL AC+ L + G++
Sbjct: 55 SPTDFSWNSLIRAYTVHGSPQNSLFLYLKMLRSSTKPSNFTFPFVLKACSTLGSVLEGEQ 114
Query: 116 FHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGN 175
H ++ R GF S+ FV N L+D+Y +C + SA + ++EVS N+II GY + G
Sbjct: 115 IHTHVLRLGFGSDLFVCNSLIDMYCKCFRLDSARNFWDDMGFRDEVSWNSIISGYVQWGQ 174
Query: 176 VAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMR-DGIEPTSFTF 234
V +AR+LF++M ++R ++ W +MI+GY + E S+FR +L+ D ++P + T
Sbjct: 175 VEKARDLFEEMP---MRRNVVCWTAMINGYGKEGDFVEMLSLFRQMLVSADEVQPNAATM 231
Query: 235 GSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIEN 294
+L AC+ + + G+ + + +T + AL++MY + D+ A FD +
Sbjct: 232 VCLLSACSTLCNYEVGRFLSVFIDVNKIPLNTILVTALIDMYSKCGDVEKAWRIFDGVSC 291
Query: 295 IENLLGKMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILS 340
N+ +WNA+ L+ M + + P+ T+ +LS
Sbjct: 292 --------------KNLPSWNAIITGCVQGGLLEEAIDLYRHMKAQSVKPNEITLVNVLS 337
Query: 341 ACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVS 400
AC+ L +E G++VH Y R G D +V + TALVDMYAKCG + A L + + S D+
Sbjct: 338 ACAGLGALELGREVHLYLGRNGLDLNVILATALVDMYAKCGKIDDACLIFVKTSEKDVAL 397
Query: 401 QNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA 460
NAM+ A HG G++ +A F +++ +G +P+ ++F+ LSAC H+G ++ G F MA
Sbjct: 398 WNAMILGLAYHGDGRDSLAVFSQMVRAGVQPNDVTFIGVLSACNHSGLVEEGRVQFSSMA 457
Query: 461 -YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFG 519
+ + P L+HY CMVDLL RAG L EAYE ++ + + PDS++WGALL C H NLE
Sbjct: 458 DKHGLSPKLEHYACMVDLLGRAGHLKEAYELVQNMLIPPDSIIWGALLSACRIHRNLELA 517
Query: 520 QIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDE 579
++ ++ + N G ++L+N++A +GRW D+AR R+++K++R+ K GCSW+E
Sbjct: 518 DKISETIMASQDPNIGFCILLSNIYASSGRWKDVARVRRQVKEKRIKKPSGCSWVEVDGV 577
Query: 580 IHKFRASDRSHDRSEEIY 597
+H+F D +H +S EIY
Sbjct: 578 VHRFVVEDTTHLKSGEIY 595
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 119/429 (27%), Positives = 188/429 (43%), Gaps = 72/429 (16%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC LD A+ + M RD VSWNS+++ G V +A + E M N+V
Sbjct: 137 MYCKCFRLDSARNFWDDMGFRDEVSWNSIISGYVQWGQVEKARDLFEEMPM----RRNVV 192
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRM--QAEGLEPNARTLSSVLPACARLQKLSLGKEFHG 118
W+A+I G+ + G E + + +M A+ ++PNA T+ +L AC+ L +G+
Sbjct: 193 CWTAMINGYGKEGDFVEMLSLFRQMLVSADEVQPNAATMVCLLSACSTLCNYEVGRFLSV 252
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
+I N N +V L+D+Y +CGD+ A +IF S KN S N II G + G + E
Sbjct: 253 FIDVNKIPLNTILVTALIDMYSKCGDVEKAWRIFDGVSCKNLPSWNAIITGCVQGGLLEE 312
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
A +L+ M+ ++P T +VL
Sbjct: 313 AIDLYRHMK------------------------------------AQSVKPNEITLVNVL 336
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
ACA + +L G+E+H GL + + ALV+MY + + A + F +
Sbjct: 337 SACAGLGALELGREVHLYLGRNGLDLNVILATALVDMYAKCGKIDDACLIFVKTS----- 391
Query: 299 LGKMKEDGFEPNVYTWNAMQL--------------FSEMLSLDLTPDIYTVGIILSACSS 344
E +V WNAM L FS+M+ + P+ T +LSAC+
Sbjct: 392 ---------EKDVALWNAMILGLAYHGDGRDSLAVFSQMVRAGVQPNDVTFIGVLSACNH 442
Query: 345 LATMERGK-QVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHA-RLAYKRISTPDLVSQN 402
+E G+ Q + A + G + +VD+ + G LK A L + PD +
Sbjct: 443 SGLVEEGRVQFSSMADKHGLSPKLEHYACMVDLLGRAGHLKEAYELVQNMLIPPDSIIWG 502
Query: 403 AMLTAYAMH 411
A+L+A +H
Sbjct: 503 ALLSACRIH 511
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 81/181 (44%), Gaps = 5/181 (2%)
Query: 337 IILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTP 396
++LS + ++ + Q+HA + G H+ L+D++ S+ +AR + +P
Sbjct: 1 MLLSLLRTATSLTQIHQIHAQTLIHGLPLQTHLIPKLIDLH----SIDYARFVLDQTPSP 56
Query: 397 DLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFF 456
S N+++ AY +HG + + + ++L S +P + +F L AC GS+ G +
Sbjct: 57 TDFSWNSLIRAYTVHGSPQNSLFLYLKMLRSSTKPSNFTFPFVLKACSTLGSVLEGEQIH 116
Query: 457 DLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNL 516
+ L ++D+ + L A F + D V W +++ G V G +
Sbjct: 117 THVLRLGFGSDLFVCNSLIDMYCKCFRLDSARNFWDDMGFR-DEVSWNSIISGYVQWGQV 175
Query: 517 E 517
E
Sbjct: 176 E 176
>gi|357113684|ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 802
Score = 357 bits (917), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 199/625 (31%), Positives = 328/625 (52%), Gaps = 46/625 (7%)
Query: 10 DAKKVFKMMP--ERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIG 67
+A+++F +P +R+ +WNS+++ A +G + +A M D VSW+ ++
Sbjct: 81 EARRLFDEIPAAQRNVFTWNSLLSLYAKSGRLADARAVFAEMPERDP-----VSWTVMVV 135
Query: 68 GFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMS 127
G + G EAI M M +GL P TL++VL +CA + +G++ H ++ + G S
Sbjct: 136 GLNRVGRFGEAIKMFLDMVTDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSS 195
Query: 128 NPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQME 187
V N ++++Y +CGD +A +F + ++ S N ++ G + A LF+ M
Sbjct: 196 CVPVANSVLNMYGKCGDAETARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMP 255
Query: 188 HLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSL 247
R I+SWN++I+GY N L +A F +L + P FT SVL ACA++ +
Sbjct: 256 ----DRTIVSWNAVIAGYNQNGLNAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMV 311
Query: 248 RKGKEIHALAI--------------------------ALGLQSDTFVG-------GALVE 274
GK++HA + A G+ + AL+E
Sbjct: 312 SIGKQVHAYILRSRMPYIGQVTNALISMYAKSGSVENARGVMQQAVMADLNVISFTALLE 371
Query: 275 MYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYT 334
Y + D+ A+ FD + N + + G+E N + AM+LF M+ P+ YT
Sbjct: 372 GYVKLGDMKHAREMFDVMSNRDVVAWTAMIVGYEQNGHNDEAMELFRLMIRSGPEPNSYT 431
Query: 335 VGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS 394
V +LS C+SLA +E GKQ+H AIR + + ++V MYA+ GSL AR + R+
Sbjct: 432 VAAVLSVCASLACLEYGKQIHCKAIRSLQEQSSSVSNSIVTMYARSGSLPWARRVFDRVH 491
Query: 395 -TPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGS 453
+ V+ +M+ A A HG G++ + F +L G +PD I+F+ LSAC H G + G
Sbjct: 492 WRKETVTWTSMIVALAQHGLGEDAVGLFEEMLRVGVKPDRITFVGVLSACTHVGFVDEGK 551
Query: 454 EFF-DLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVS 512
+F L + + P + HY CMVDLL+RAG EA EFI+++P+ PD++ WG+LL C
Sbjct: 552 RYFQQLQDKHGIVPEMSHYACMVDLLARAGLFSEAQEFIQQMPVEPDAIAWGSLLSACRV 611
Query: 513 HGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCS 572
H N + ++AA++L+ ++P N+G Y L+N+++ GRW+D A+ ++ KD+ + K G S
Sbjct: 612 HKNADLAELAAEKLLSIDPGNSGAYSALSNVYSACGRWNDAAKIWKRRKDKSVKKETGFS 671
Query: 573 WIEDRDEIHKFRASDRSHDRSEEIY 597
W + +H F A D H + + +Y
Sbjct: 672 WTHIGNRVHVFGADDVLHPQRDTVY 696
Score = 208 bits (530), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 135/422 (31%), Positives = 221/422 (52%), Gaps = 26/422 (6%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKCG + A+ VF+ MPER SWN++V+ A G + AL E M +V
Sbjct: 206 MYGKCGDAETARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPD-----RTIV 260
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQA-EGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
SW+AVI G+ QNG + +A+ RM + + P+ T++SVL ACA L +S+GK+ H Y
Sbjct: 261 SWNAVIAGYNQNGLNAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAY 320
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIK--NEVSCNTIIVGYCENGNVA 177
I R+ V N L+ +Y + G + +A + + + N +S ++ GY + G++
Sbjct: 321 ILRSRMPYIGQVTNALISMYAKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGDMK 380
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
ARE+FD M + R +++W +MI GY N DEA +FR L++R G EP S+T +V
Sbjct: 381 HAREMFDVMSN----RDVVAWTAMIVGYEQNGHNDEAMELFR-LMIRSGPEPNSYTVAAV 435
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE---- 293
L CA + L GK+IH AI + + V ++V MY R L A+ FD +
Sbjct: 436 LSVCASLACLEYGKQIHCKAIRSLQEQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRKE 495
Query: 294 --NIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG 351
+++ + + G +A+ LF EML + + PD T +LSAC+ + ++ G
Sbjct: 496 TVTWTSMIVALAQHGLGE-----DAVGLFEEMLRVGVKPDRITFVGVLSACTHVGFVDEG 550
Query: 352 KQ-VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST-PDLVSQNAMLTAYA 409
K+ + G ++ +VD+ A+ G A+ +++ PD ++ ++L+A
Sbjct: 551 KRYFQQLQDKHGIVPEMSHYACMVDLLARAGLFSEAQEFIQQMPVEPDAIAWGSLLSACR 610
Query: 410 MH 411
+H
Sbjct: 611 VH 612
>gi|297838665|ref|XP_002887214.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333055|gb|EFH63473.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 740
Score = 357 bits (916), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 194/593 (32%), Positives = 330/593 (55%), Gaps = 13/593 (2%)
Query: 11 AKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFT 70
A++VF +P+ + SWN+++ A + +G + E E++ D V+W+ +I G++
Sbjct: 57 ARRVFDGIPQPNLFSWNNLLLAYSKSGHLSEMERTFEKLPDRDG-----VTWNVLIEGYS 111
Query: 71 QNGYDEEAIGMLFRMQAEGLEPNAR-TLSSVLPACARLQKLSLGKEFHGYITRNGFMSNP 129
+G A+ M + R TL ++L + +SLGK+ HG + + GF S
Sbjct: 112 LSGLVGAAVKAYNTMMKDFSSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYL 171
Query: 130 FVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHL 189
V + L+D+Y + G + A K+F +N V NT++ G G + +A +LF ME
Sbjct: 172 LVGSPLLDMYSKVGCISDAKKVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGME-- 229
Query: 190 GVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRK 249
+ +SW++MI G N + EA FR++ + +G++ + FGSVL AC + ++
Sbjct: 230 ---KDSVSWSAMIKGLAQNGMEKEAIECFREMKI-EGLKMDQYPFGSVLPACGGLGAIND 285
Query: 250 GKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEP 309
G++IHA I LQ +VG AL++MYC+ + L A+ FD ++ + G+
Sbjct: 286 GRQIHACIIRTNLQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQ 345
Query: 310 NVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHI 369
A+++F +M + PD YT+G +SAC++++++E G Q H AI G + +
Sbjct: 346 TGRAGEAVKIFLDMQRSGIDPDHYTLGQAISACANISSLEEGSQFHGKAITAGLIHYITV 405
Query: 370 GTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGF 429
+LV +Y KCG + + + ++ D VS AM++AYA G E I F +++ G
Sbjct: 406 SNSLVTLYGKCGDIDDSTRLFNEMNVRDEVSWTAMVSAYAQFGRAVEAIQLFDKMVQLGL 465
Query: 430 RPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAY 488
+PD ++ +SAC AG ++ G +F+LM Y + PS HY+CM+DL SR+G + EA
Sbjct: 466 KPDGVTLTGVISACSRAGLVEKGQRYFELMINEYGIVPSNGHYSCMIDLFSRSGRIEEAM 525
Query: 489 EFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAG 548
FI +P PD++ W LL C + GNLE G+ AA+ LIEL+P++ Y +L++++A G
Sbjct: 526 GFINGMPFRPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKG 585
Query: 549 RWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
+W +A+ R+ MK++ + K PG SWI+ + ++H F A D S S++IY ++
Sbjct: 586 KWDCVAQLRRGMKEKNVRKEPGQSWIKWKGKLHSFSADDESSPYSDQIYAKLE 638
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 124/457 (27%), Positives = 208/457 (45%), Gaps = 85/457 (18%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G + DAKKVF + +R+ V +N+++ A G++ +AL+ M + V
Sbjct: 180 MYSKVGCISDAKKVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGMEK------DSV 233
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SWSA+I G QNG ++EAI M+ EGL+ + SVLPAC L ++ G++ H I
Sbjct: 234 SWSAMIKGLAQNGMEKEAIECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACI 293
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R + +V + L+D+Y +C + A +F + KN VS ++VGY + G EA
Sbjct: 294 IRTNLQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAV 353
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
++F M+ R GI+P +T G + A
Sbjct: 354 KIFLDMQ------------------------------------RSGIDPDHYTLGQAISA 377
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA+++SL +G + H AI GL V +LV +Y + D+ + F+E+ + +
Sbjct: 378 CANISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNEMNVRDEVSW 437
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ-----VH 355
+ A+QLF +M+ L L PD T+ ++SACS +E+G++ ++
Sbjct: 438 TAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISACSRAGLVEKGQRYFELMIN 497
Query: 356 AYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGK 415
Y I S+ H + ++D++++ G ++ A
Sbjct: 498 EYGI---VPSNGHY-SCMIDLFSRSGRIEEA----------------------------- 524
Query: 416 EGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTG 452
I FRPD I + + LSAC + G+++ G
Sbjct: 525 -----MGFINGMPFRPDAIGWTTLLSACRNKGNLEIG 556
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 134/519 (25%), Positives = 218/519 (42%), Gaps = 72/519 (13%)
Query: 98 SSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSI 157
S+ + C L K HG I R F+ N +V Y + A ++F
Sbjct: 7 SAQIKQCIGLGASRHVKMIHGNIIRTLPHPETFLHNNIVHAYALIRSSIYARRVFDGIPQ 66
Query: 158 KNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSM 217
N S N +++ Y ++G+++E F+++ R ++WN +I GY + L A
Sbjct: 67 PNLFSWNNLLLAYSKSGHLSEMERTFEKLP----DRDGVTWNVLIEGYSLSGLVGAAVKA 122
Query: 218 FRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYC 277
+ ++ T T ++L + + GK+IH I LG +S VG L++MY
Sbjct: 123 YNTMMKDFSSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYS 182
Query: 278 R---------------------YQDLVAAQMAFDEIENIENLLGKMKED---------GF 307
+ Y L+ +A IE+ L M++D G
Sbjct: 183 KVGCISDAKKVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGMEKDSVSWSAMIKGL 242
Query: 308 EPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDV 367
N A++ F EM L D Y G +L AC L + G+Q+HA IR +
Sbjct: 243 AQNGMEKEAIECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHI 302
Query: 368 HIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILAS 427
++G+AL+DMY KC L +A+ + R+ ++VS AM+ Y G E + F + S
Sbjct: 303 YVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRS 362
Query: 428 GFRPDHISFLSALSACVHAGSIKTGSEFF------DLMAYYDVKPSL------------- 468
G PDH + A+SAC + S++ GS+F L+ Y V SL
Sbjct: 363 GIDPDHYTLGQAISACANISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDS 422
Query: 469 ------------KHYTCMVDLLSRAGELGEAYEFIKK---IPMAPDSVMWGALLGGCVSH 513
+T MV ++ G EA + K + + PD V ++ C
Sbjct: 423 TRLFNEMNVRDEVSWTAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISACSRA 482
Query: 514 GNLEFGQIAADRLIE---LEPNNTGNYVMLANLFAYAGR 549
G +E GQ + +I + P+N G+Y + +LF+ +GR
Sbjct: 483 GLVEKGQRYFELMINEYGIVPSN-GHYSCMIDLFSRSGR 520
>gi|413946157|gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]
Length = 1145
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 212/693 (30%), Positives = 349/693 (50%), Gaps = 104/693 (15%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y + G + A+K+F MP RD SWN+++T + L+ EA ERM N VS
Sbjct: 136 YVQNGDITLARKLFDAMPSRDVSSWNTMLTGYCHSQLMEEARNLFERMPER-----NGVS 190
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W+ +I G+ A M M EG+ P L SVL A L K + + H +
Sbjct: 191 WTVMISGYVLIEQHGRAWDMFRTMLCEGMTPEQPNLVSVLSAVRHLGKPGILESIHVLVH 250
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDML-SALKIFSKFSIKNEVSCNTII------------- 167
+ GF + V +++ Y + +ML SA+K F + +NE + +TII
Sbjct: 251 KTGFERDVVVGTAILNGYTKDVNMLDSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDAF 310
Query: 168 ------------------VGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNS 209
G G + +A+ LFDQ+ + ++SWN+MI+GY+ N
Sbjct: 311 AVYQRDPLKSVPSRTSMLTGLARYGRIDDAKILFDQIH----EPNVVSWNAMITGYMQNE 366
Query: 210 LYDEAFSMFRDL------------------------------LMRDGIEPTSFTFGSVLI 239
+ DEA +F + L R G+ P+ + S
Sbjct: 367 MVDEAEDLFNRMPFRNTISWAGMIAGYARNGRSEQALVSLQALHRKGMLPSLSSLTSSFF 426
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIEN----- 294
AC+++ +L GK++H+LA+ G Q +++V AL+ +Y +Y+ + + + FD +
Sbjct: 427 ACSNIEALETGKQVHSLAVKAGCQFNSYVCNALITLYGKYRSIGSVRQIFDRMTVKDTVS 486
Query: 295 --------IENLLGKMKEDGFE----PNVYTWN--------------AMQLFSEMLSLDL 328
++N L D F P+V +W A+++F ML
Sbjct: 487 YNSFMSALVQNNLFDEARDVFNNMPSPDVVSWTTIISACAQADQGNEAVEIFRSMLHERE 546
Query: 329 TPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARL 388
P+ + I+L +L + G+Q+H AI+ G DS + + ALV MY KC S ++
Sbjct: 547 LPNPPILTILLGLSGNLGAPQLGQQIHTIAIKLGMDSGLVVANALVSMYFKCSSADSLKV 606
Query: 389 AYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGS 448
+ + D+ + N ++T YA HG G+E I ++ ++++G P+ ++F+ L AC H+G
Sbjct: 607 -FDSMEERDIFTWNTIITGYAQHGLGREAIRMYQLMVSAGVLPNEVTFVGLLHACSHSGL 665
Query: 449 IKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALL 507
+ G +FF M+ Y + P L+HY CMVDLL RAG++ A FI +P+ PDSV+W ALL
Sbjct: 666 VDEGHQFFKSMSSDYGLTPLLEHYACMVDLLGRAGDVQGAEHFIYDMPIEPDSVIWSALL 725
Query: 508 GGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHK 567
G C H N+E G+ AA++L +EP+N GNYVML+N+++ G W ++A+ R+ MK+R ++K
Sbjct: 726 GACKIHKNVEIGRRAAEKLFSIEPSNAGNYVMLSNIYSSQGMWDEVAKVRKLMKERGVNK 785
Query: 568 SPGCSWIEDRDEIHKFRASDRSHDRSEEIYTII 600
PGCSW++ ++++H F D H++ + IY +
Sbjct: 786 DPGCSWMQIKNKMHSFVTGDEEHEQIQNIYATL 818
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 124/551 (22%), Positives = 215/551 (39%), Gaps = 112/551 (20%)
Query: 3 GKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSW 62
G+ G L +A++VF MP RD +++W
Sbjct: 44 GRLGRLHEAREVFDSMPFRD------------------------------------IIAW 67
Query: 63 SAVIGGFTQNGYDEEAIGMLFRMQAEGLEP-NARTLSSVLPACARLQKLSLGKE-FHGYI 120
+++I + NG + R A+ + N RT + +L AR ++ + F G
Sbjct: 68 NSMIFAYCNNGMPDAG-----RSLADAISGGNLRTGTILLSGYARAGRVRDARRVFDGMG 122
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
RN N +V Y + GD+ A K+F ++ S NT++ GYC + + EAR
Sbjct: 123 VRN-----TVAWNAMVTCYVQNGDITLARKLFDAMPSRDVSSWNTMLTGYCHSQLMEEAR 177
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LF++M +R +SW MISGYV + A+ MFR +L +G+ P SVL A
Sbjct: 178 NLFERMP----ERNGVSWTVMISGYVLIEQHGRAWDMFRTMLC-EGMTPEQPNLVSVLSA 232
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
+ + IH L G + D VG A++ Y + +++ + + F E +
Sbjct: 233 VRHLGKPGILESIHVLVHKTGFERDVVVGTAILNGYTKDVNMLDSAVKF-----FEGMAA 287
Query: 301 KMKEDGFEPNVYTWNA-MQLFSEMLSLDLTPDIY---TVGIILSACSSLATMERGKQVHA 356
+ N YTW+ + S+ +D +Y + + S S L + R ++
Sbjct: 288 R--------NEYTWSTIIAALSQAGRIDDAFAVYQRDPLKSVPSRTSMLTGLARYGRIDD 339
Query: 357 YAIRCG--YDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHG 414
I ++ +V A++ Y + + A + R+ + +S M+ YA +G
Sbjct: 340 AKILFDQIHEPNVVSWNAMITGYMQNEMVDEAEDLFNRMPFRNTISWAGMIAGYARNGRS 399
Query: 415 KEGIAHFRRILASGFRPDHISFLSALSAC-----------VHAGSIKTGSEF-------- 455
++ + + + G P S S+ AC VH+ ++K G +F
Sbjct: 400 EQALVSLQALHRKGMLPSLSSLTSSFFACSNIEALETGKQVHSLAVKAGCQFNSYVCNAL 459
Query: 456 ----------------FDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPD 499
FD M D Y + L + EA + +P +PD
Sbjct: 460 ITLYGKYRSIGSVRQIFDRMTVKDTVS----YNSFMSALVQNNLFDEARDVFNNMP-SPD 514
Query: 500 SVMWGALLGGC 510
V W ++ C
Sbjct: 515 VVSWTTIISAC 525
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 94/359 (26%), Positives = 150/359 (41%), Gaps = 52/359 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+YGK S+ +++F M +D VS+NS ++A N L EA + M S P++V
Sbjct: 462 LYGKYRSIGSVRQIFDRMTVKDTVSYNSFMSALVQNNLFDEARDVFNNMPS-----PDVV 516
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ +I Q EA+ + M E PN L+ +L L LG++ H
Sbjct: 517 SWTTIISACAQADQGNEAVEIFRSMLHERELPNPPILTILLGLSGNLGAPQLGQQIHTIA 576
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G S V N LV +Y +C +LK+F ++ + NTII GY ++G EA
Sbjct: 577 IKLGMDSGLVVANALVSMYFKCSSA-DSLKVFDSMEERDIFTWNTIITGYAQHGLGREAI 635
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFR-------------------DL 221
++ M GV +++ ++ + L DE F+ DL
Sbjct: 636 RMYQLMVSAGVLPNEVTFVGLLHACSHSGLVDEGHQFFKSMSSDYGLTPLLEHYACMVDL 695
Query: 222 LMRDG-------------IEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFV 268
L R G IEP S + ++L AC + K EI A +
Sbjct: 696 LGRAGDVQGAEHFIYDMPIEPDSVIWSALLGAC----KIHKNVEIGRRAAEKLFSIEPSN 751
Query: 269 GGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNV-YTWNAMQLFSEMLSL 326
G Y ++ ++Q +DE+ + L MKE G + +W MQ+ ++M S
Sbjct: 752 AGN----YVMLSNIYSSQGMWDEVAKVRKL---MKERGVNKDPGCSW--MQIKNKMHSF 801
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 75/378 (19%), Positives = 155/378 (41%), Gaps = 23/378 (6%)
Query: 141 RCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNS 200
R G + A ++F ++ ++ N++I YC NG R L D + ++ G I
Sbjct: 45 RLGRLHEAREVFDSMPFRDIIAWNSMIFAYCNNGMPDAGRSLADAISGGNLRTGTI---- 100
Query: 201 MISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIAL 260
++SGY +A +F + +R+ + + + + D+ RK L A+
Sbjct: 101 LLSGYARAGRVRDARRVFDGMGVRNTVAWNAMV--TCYVQNGDITLARK------LFDAM 152
Query: 261 GLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLF 320
D ++ YC Q + A+ F+ + + + G+ A +F
Sbjct: 153 P-SRDVSSWNTMLTGYCHSQLMEEARNLFERMPERNGVSWTVMISGYVLIEQHGRAWDMF 211
Query: 321 SEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAK- 379
ML +TP+ + +LSA L + +H + G++ DV +GTA+++ Y K
Sbjct: 212 RTMLCEGMTPEQPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVGTAILNGYTKD 271
Query: 380 CGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSA 439
L A ++ ++ + + + ++ A + G + A ++R P S L+
Sbjct: 272 VNMLDSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDAFAVYQRDPLKSV-PSRTSMLTG 330
Query: 440 LSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPD 499
L+ G I FD + +P++ + M+ + + EA + ++P +
Sbjct: 331 LA---RYGRIDDAKILFDQIH----EPNVVSWNAMITGYMQNEMVDEAEDLFNRMPFR-N 382
Query: 500 SVMWGALLGGCVSHGNLE 517
++ W ++ G +G E
Sbjct: 383 TISWAGMIAGYARNGRSE 400
>gi|224117876|ref|XP_002317690.1| predicted protein [Populus trichocarpa]
gi|222860755|gb|EEE98302.1| predicted protein [Populus trichocarpa]
Length = 706
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 197/598 (32%), Positives = 313/598 (52%), Gaps = 73/598 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y K L DA+K+F MMP+ D LV
Sbjct: 155 VYSKGRQLGDARKLFDMMPQID------------------------------------LV 178
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
W+ +IGG+ QNG+ ++A + M + G++P++ T +S LP+ A L KE HGYI
Sbjct: 179 VWNRMIGGYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHGYI 238
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R+G + + ++ + L+D+Y +C D + A K+F
Sbjct: 239 VRHGVILDVYLNSALIDLYFKCRDAVMACKMF---------------------------- 270
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+L + I+ + +MISGYV N + +A +FR LL + I P + TF S+L A
Sbjct: 271 -------NLSTKFDIVIYTAMISGYVLNGMNKDALEIFRWLLQKKMI-PNALTFSSILPA 322
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA + +++ G+E+H I L+ VG A++ MY + L A + F I + +
Sbjct: 323 CAGLAAIKLGRELHGYIIKNELEEKCPVGSAIMNMYAKCGRLDLAHLIFGRISIKDAICW 382
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
F + A+ LF +M + D TV LSAC+++ + GK++H + I+
Sbjct: 383 NSIITSFSQDGKPEEAIYLFRQMGMEGVKYDCVTVSAALSACANIPALHYGKEIHGFMIK 442
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
++SD+ +AL++MYAKCG L ARL + + + V+ N+++ AY HG+ + +A
Sbjct: 443 GAFESDLFDMSALINMYAKCGKLNIARLVFNLMQEKNEVAWNSIIAAYGYHGYLADSLAL 502
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLS 479
F +L G +PDHI+FL+ LS+C HAG ++ G +F M Y + ++HY CM DL
Sbjct: 503 FHNMLEEGIQPDHITFLTILSSCGHAGQVEDGVRYFRCMTEEYGIPAQMEHYACMADLFG 562
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
RAG L EA+E I +P P + +WG LLG C HGN+E ++A+ L++LEP N+G Y++
Sbjct: 563 RAGHLDEAFEVITSMPFPPAASVWGTLLGACRVHGNVELAEVASRYLLDLEPKNSGYYLL 622
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
L ++ A AG+W + + + MK+R + K PGCSWIE + F A+D SH S +IY
Sbjct: 623 LTHVLADAGKWRSVHKIQHLMKERGVQKVPGCSWIEVNNTTCVFFAADGSHPESPQIY 680
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 142/552 (25%), Positives = 264/552 (47%), Gaps = 45/552 (8%)
Query: 14 VFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNG 73
+ +M + D +S++ A NG + +A ++M D V W+ +I G+ Q G
Sbjct: 36 ILEMGFDLDMFVASSLIKLYADNGCIEDARRFFDKMIDKD-----CVLWNVMINGYVQCG 90
Query: 74 YDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVN 133
+ AI + M + +P++ T + VL + G++ HG + R+G P V N
Sbjct: 91 ESDSAIKLFKDMMSSEAKPDSVTFACVLSISCSEAMVEYGRQLHGLVVRSGLDFVPLVGN 150
Query: 134 GLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQR 193
LV VY + + +AR+LFD M Q
Sbjct: 151 TLVTVYSK-------------------------------GRQLGDARKLFDMMP----QI 175
Query: 194 GIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEI 253
++ WN MI GYV N D+A +F +++ GI+P S TF S L + A+ +SL++ KEI
Sbjct: 176 DLVVWNRMIGGYVQNGFMDDASMLFNEMI-SAGIKPDSITFTSFLPSLAESSSLKQIKEI 234
Query: 254 HALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYT 313
H + G+ D ++ AL+++Y + +D V A F+ + ++ G+ N
Sbjct: 235 HGYIVRHGVILDVYLNSALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGYVLNGMN 294
Query: 314 WNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTAL 373
+A+++F +L + P+ T IL AC+ LA ++ G+++H Y I+ + +G+A+
Sbjct: 295 KDALEIFRWLLQKKMIPNALTFSSILPACAGLAAIKLGRELHGYIIKNELEEKCPVGSAI 354
Query: 374 VDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDH 433
++MYAKCG L A L + RIS D + N+++T+++ G +E I FR++ G + D
Sbjct: 355 MNMYAKCGRLDLAHLIFGRISIKDAICWNSIITSFSQDGKPEEAIYLFRQMGMEGVKYDC 414
Query: 434 ISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKK 493
++ +ALSAC + ++ G E M + L + ++++ ++ G+L A +
Sbjct: 415 VTVSAALSACANIPALHYGKEIHGFMIKGAFESDLFDMSALINMYAKCGKLNIA-RLVFN 473
Query: 494 IPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIE--LEPNNTGNYVMLANLFAYAGRWS 551
+ + V W +++ HG L ++E ++P++ +L++ +AG+
Sbjct: 474 LMQEKNEVAWNSIIAAYGYHGYLADSLALFHNMLEEGIQPDHITFLTILSSC-GHAGQVE 532
Query: 552 DLARTRQKMKDR 563
D R + M +
Sbjct: 533 DGVRYFRCMTEE 544
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 144/289 (49%), Gaps = 1/289 (0%)
Query: 226 GIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAA 285
G+ P +TF V+ C +N++R GK I + + +G D FV +L+++Y + A
Sbjct: 5 GVFPDKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGCIEDA 64
Query: 286 QMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSL 345
+ FD++ + + +L + +G+ + +A++LF +M+S + PD T +LS S
Sbjct: 65 RRFFDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSISCSE 124
Query: 346 ATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAML 405
A +E G+Q+H +R G D +G LV +Y+K L AR + + DLV N M+
Sbjct: 125 AMVEYGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVVWNRMI 184
Query: 406 TAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVK 465
Y +G + F ++++G +PD I+F S L + + S+K E + + V
Sbjct: 185 GGYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHGYIVRHGVI 244
Query: 466 PSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
+ + ++DL + + A + + D V++ A++ G V +G
Sbjct: 245 LDVYLNSALIDLYFKCRDAVMACKMF-NLSTKFDIVIYTAMISGYVLNG 292
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 100/207 (48%), Gaps = 5/207 (2%)
Query: 323 MLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGS 382
ML + PD YT ++ C+ L + GK + + G+D D+ + ++L+ +YA G
Sbjct: 1 MLGCGVFPDKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGC 60
Query: 383 LKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSA 442
++ AR + ++ D V N M+ Y G I F+ +++S +PD ++F LS
Sbjct: 61 IEDARRFFDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSI 120
Query: 443 CVHAGSIKTGSEFFDLMAY--YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDS 500
++ G + L+ D P + + +V + S+ +LG+A + +P D
Sbjct: 121 SCSEAMVEYGRQLHGLVVRSGLDFVPLVGN--TLVTVYSKGRQLGDARKLFDMMPQI-DL 177
Query: 501 VMWGALLGGCVSHGNLEFGQIAADRLI 527
V+W ++GG V +G ++ + + +I
Sbjct: 178 VVWNRMIGGYVQNGFMDDASMLFNEMI 204
>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1047
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 199/629 (31%), Positives = 328/629 (52%), Gaps = 71/629 (11%)
Query: 4 KCGSLDDAKKVFKMMP----ERDCVSWNSVVTACAANGLVLEALE--------------- 44
+CG + A ++FK M E D + S+V AC+++G + +
Sbjct: 349 QCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDK 408
Query: 45 -----------CLERMSSL----DNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEG 89
C + ++L + E N+V W+ ++ + + + +MQ E
Sbjct: 409 IEGALLNLYAKCSDIETALNYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEE 468
Query: 90 LEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSAL 149
+ PN T S+L C RL L LG++ H I + F N +V + L+D+Y + G + +A
Sbjct: 469 IVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAW 528
Query: 150 KIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNS 209
I +F+ K+ ++SW +MI+GY +
Sbjct: 529 DILIRFAGKD-----------------------------------VVSWTTMIAGYTQYN 553
Query: 210 LYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVG 269
D+A + FR +L R GI + + ACA + +L++G++IHA A G SD
Sbjct: 554 FDDKALTTFRQMLDR-GIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQ 612
Query: 270 GALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLT 329
ALV +Y + ++ A +AF++ E +N+ GF+ + A+++F+ M +
Sbjct: 613 NALVTLYSKCGNIEEAYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFARMNREGID 672
Query: 330 PDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLA 389
+ +T G + A S A M++GKQVHA + GYDS+ + A++ MYAKCGS+ A+
Sbjct: 673 SNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNAIISMYAKCGSISDAKKQ 732
Query: 390 YKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSI 449
+ +S + VS NAM+ AY+ HG G E + F +++ S RP+H++ + LSAC H G +
Sbjct: 733 FLELSMKNEVSWNAMINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLV 792
Query: 450 KTGSEFFDLM-AYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLG 508
G E+F+ M Y + P +HY C+VD+L+RAG L A +FI ++P+ PD+++W LL
Sbjct: 793 DKGIEYFESMNTEYGLAPKPEHYVCVVDMLTRAGLLSRAKDFILEMPIEPDALVWRTLLS 852
Query: 509 GCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKS 568
CV H N+E G+ AA L+ELEP ++ YV+L+NL+A +W TRQKMK++ + K
Sbjct: 853 ACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVCRKWDARDLTRQKMKEKGVKKE 912
Query: 569 PGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
PG SWIE ++ IH F D++H ++EI+
Sbjct: 913 PGQSWIEVKNSIHSFYVGDQNHPLADEIH 941
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 141/519 (27%), Positives = 235/519 (45%), Gaps = 77/519 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y + G +D A++VF + +D SW
Sbjct: 214 LYSRNGFVDRARRVFDGLYLKDHSSW---------------------------------- 239
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
A+I G ++N + EAI + M G+ P SSVL AC +++ L +G++ HG +
Sbjct: 240 --VAMISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLV 297
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ GF S+ +V N LV +Y G ++SA IFS S ++ V+ NT+I G + G +A
Sbjct: 298 LKLGFSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAM 357
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
ELF +M+ DG+EP S T S+++A
Sbjct: 358 ELFKRMQ------------------------------------LDGLEPDSNTLASLVVA 381
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAF--DEIENIENL 298
C+ +L G+++HA LG S+ + GAL+ +Y + D+ A F E+EN+
Sbjct: 382 CSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLW 441
Query: 299 LGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYA 358
+ G ++ N+ ++F +M ++ P+ YT IL C L +E G+Q+H+
Sbjct: 442 NVMLVAYGLLDDLR--NSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQI 499
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGI 418
I+ + + ++ + L+DMYAK G L A R + D+VS M+ Y + + +
Sbjct: 500 IKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKAL 559
Query: 419 AHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLL 478
FR++L G R D + +A+SAC ++K G + L +V L
Sbjct: 560 TTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLY 619
Query: 479 SRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
S+ G + EAY ++ A D++ W AL+ G GN E
Sbjct: 620 SKCGNIEEAYLAFEQTE-AGDNIAWNALVSGFQQSGNNE 657
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 138/509 (27%), Positives = 216/509 (42%), Gaps = 82/509 (16%)
Query: 6 GSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAV 65
G LD A KVF MPER +WN ++ A+ L
Sbjct: 117 GDLDGALKVFDEMPERTIFTWNKMIKELASRSL--------------------------- 149
Query: 66 IGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPAC-ARLQKLSLGKEFHGYITRNG 124
+ + RM E + PN T S VL AC + ++ H I G
Sbjct: 150 ---------SGKVFCLFGRMVNENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARIIYQG 200
Query: 125 FMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFD 184
+ V N L+D+ Y NG V AR +FD
Sbjct: 201 LGKSTIVCNPLIDL-------------------------------YSRNGFVDRARRVFD 229
Query: 185 QMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADM 244
+ + SW +MISG N EA +F D+ + GI PT + F SVL AC +
Sbjct: 230 GL----YLKDHSSWVAMISGLSKNECEVEAIRLFCDMYVL-GIMPTPYAFSSVLSACKKI 284
Query: 245 NSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKE 304
SL G+++H L + LG SDT+V ALV +Y L++A+ F + + +
Sbjct: 285 ESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLI 344
Query: 305 DGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYD 364
+G Y AM+LF M L PD T+ ++ ACSS T+ G+Q+HAY + G+
Sbjct: 345 NGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFA 404
Query: 365 SDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRI 424
S+ I AL+++YAKC ++ A + ++V N ML AY + + FR++
Sbjct: 405 SNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQM 464
Query: 425 LASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPS--LKHYTC--MVDLLSR 480
P+ ++ S L C+ G ++ G + + +K S L Y C ++D+ ++
Sbjct: 465 QIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQI----IKTSFQLNAYVCSVLIDMYAK 520
Query: 481 AGELGEAYEFIKKIPMAPDSVMWGALLGG 509
G+L A++ + + D V W ++ G
Sbjct: 521 LGKLDTAWDILIRFA-GKDVVSWTTMIAG 548
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 129/296 (43%), Gaps = 39/296 (13%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KCG++++A F+ D ++WN++V+ +G +NE
Sbjct: 618 LYSKCGNIEEAYLAFEQTEAGDNIAWNALVSGFQQSG---------------NNE----- 657
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
EA+ + RM EG++ N T S + A + + GK+ H I
Sbjct: 658 ----------------EALRVFARMNREGIDSNNFTFGSAVKAASETANMKQGKQVHAVI 701
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
T+ G+ S V N ++ +Y +CG + A K F + S+KNEVS N +I Y ++G +EA
Sbjct: 702 TKTGYDSETEVCNAIISMYAKCGSISDAKKQFLELSMKNEVSWNAMINAYSKHGFGSEAL 761
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+ FDQM H V+ ++ ++S L D+ F + G+ P + V+
Sbjct: 762 DSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIEYFESMNTEYGLAPKPEHYVCVVDM 821
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
L + K+ + + ++ D V L+ ++++ + A + +E
Sbjct: 822 LTRAGLLSRAKD---FILEMPIEPDALVWRTLLSACVVHKNMEIGEFAAHHLLELE 874
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 135/349 (38%), Gaps = 72/349 (20%)
Query: 226 GIEPTSFTFGSVLIACADMN-SLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVA 284
GI P T +L C N SL +G+++H+ + LG ++ + L++ Y DL
Sbjct: 62 GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDG 121
Query: 285 AQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQ--------------LFSEMLSLDLTP 330
A FDE+ E ++TWN M LF M++ ++TP
Sbjct: 122 ALKVFDEMP--------------ERTIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTP 167
Query: 331 DIYTVGIILSAC-SSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLA 389
+ T +L AC + +Q+HA I G + L+D+Y++ G + AR
Sbjct: 168 NEGTFSGVLEACRGGSVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRV 227
Query: 390 YKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSAC------ 443
+ + D S AM++ + + E I F + G P +F S LSAC
Sbjct: 228 FDGLYLKDHSSWVAMISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESL 287
Query: 444 -----------------------------VHAGSIKTGSEFFDLMAYYDVKPSLKHYTCM 474
H GS+ + F M+ D Y +
Sbjct: 288 EIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAVT----YNTL 343
Query: 475 VDLLSRAGELGEAYEFIKKIP---MAPDSVMWGALLGGCVSHGNLEFGQ 520
++ LS+ G +A E K++ + PDS +L+ C S G L GQ
Sbjct: 344 INGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQ 392
>gi|357481283|ref|XP_003610927.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512262|gb|AES93885.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 802
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 197/539 (36%), Positives = 302/539 (56%), Gaps = 19/539 (3%)
Query: 65 VIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNG 124
+I F Q +EA+ L R+ +P+ R S+++ AC R +KL LGK H + +
Sbjct: 38 IIELFCQQNRLKEAVDYLHRIP----QPSPRLYSTLIAACLRHRKLELGKRVHAHTKASN 93
Query: 125 FMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFD 184
F+ + N L+ +Y +CG ++ A +F + K+ S NT+I GY G + +AR+LFD
Sbjct: 94 FIPGIVISNRLIHMYAKCGSLVDAQMLFDEIPQKDLCSWNTMISGYANVGRIEQARKLFD 153
Query: 185 QMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADM 244
+M H R SWN++ISGYV Y EA +FR + + FT S L A A +
Sbjct: 154 EMPH----RDNFSWNAVISGYVSQGWYMEALDLFRMMQENESSNCNMFTLSSALAAAAAI 209
Query: 245 NSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAA-----QMAFDEIENIENLL 299
+SLR+GKEIH I GL+ D V AL+++Y + L A QMA +I + ++
Sbjct: 210 SSLRRGKEIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMI 269
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
+ EDG + ++ LF +++ + P+ YT +L+AC+ LA + GK+VH Y
Sbjct: 270 HRCFEDGRKKEGFS-----LFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYMT 324
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
R GYD +ALV +Y+KCG+ + AR + ++ PDLVS +++ YA +G +
Sbjct: 325 RVGYDPFSFAASALVHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVGYAQNGQPDMALQ 384
Query: 420 HFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFF-DLMAYYDVKPSLKHYTCMVDLL 478
F +L SG +PD I+F+ LSAC HAG + G E+F + + + + HY C++DLL
Sbjct: 385 FFESLLRSGTKPDEITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTADHYACVIDLL 444
Query: 479 SRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYV 538
+R+G EA I +PM PD +W +LLGGC HGN+E + AA L ELEP N Y+
Sbjct: 445 ARSGRFKEAENIIDNMPMKPDKFLWASLLGGCRIHGNIELAERAAKALFELEPENPATYI 504
Query: 539 MLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
L+N++A AG W++ + R M +R + K PG SWIE + ++H F D SH + +I+
Sbjct: 505 TLSNIYANAGLWTEETKVRNDMDNRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKISDIH 563
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 124/417 (29%), Positives = 191/417 (45%), Gaps = 46/417 (11%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGSL DA+ +F +P++D SWN++++ A G + +A + + M DN
Sbjct: 107 MYAKCGSLVDAQMLFDEIPQKDLCSWNTMISGYANVGRIEQARKLFDEMPHRDN-----F 161
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNAR--TLSSVLPACARLQKLSLGKEFHG 118
SW+AVI G+ G+ EA+ LFRM E N TLSS L A A + L GKE HG
Sbjct: 162 SWNAVISGYVSQGWYMEALD-LFRMMQENESSNCNMFTLSSALAAAAAISSLRRGKEIHG 220
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
Y+ R+G + V L+D+Y +CG + A IF + + K+ VS T+I E+G
Sbjct: 221 YLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMIHRCFEDGR--- 277
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
E FS+FRD LM G+ P +TF VL
Sbjct: 278 --------------------------------KKEGFSLFRD-LMGSGVRPNEYTFAGVL 304
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
ACAD+ + + GKE+H +G +F ALV +Y + + A+ F+++ + +
Sbjct: 305 NACADLAAEQMGKEVHGYMTRVGYDPFSFAASALVHVYSKCGNTETARRVFNQMPRPDLV 364
Query: 299 LGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ-VHAY 357
G+ N A+Q F +L PD T +LSAC+ ++ G + H+
Sbjct: 365 SWTSLIVGYAQNGQPDMALQFFESLLRSGTKPDEITFVGVLSACTHAGLVDIGLEYFHSV 424
Query: 358 AIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNAMLTAYAMHGH 413
+ G ++D+ A+ G K A + PD ++L +HG+
Sbjct: 425 KEKHGLVHTADHYACVIDLLARSGRFKEAENIIDNMPMKPDKFLWASLLGGCRIHGN 481
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 75/190 (39%), Gaps = 42/190 (22%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KCG+ + A++VF MP D VSW S++ A NG AL+ E
Sbjct: 341 VYSKCGNTETARRVFNQMPRPDLVSWTSLIVGYAQNGQPDMALQFFES------------ 388
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKE-FHGY 119
L R G +P+ T VL AC + +G E FH
Sbjct: 389 ---------------------LLR---SGTKPDEITFVGVLSACTHAGLVDIGLEYFHSV 424
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCE-NGNV-- 176
++G + ++D+ R G A I +K + ++G C +GN+
Sbjct: 425 KEKHGLVHTADHYACVIDLLARSGRFKEAENIIDNMPMKPDKFLWASLLGGCRIHGNIEL 484
Query: 177 AE--ARELFD 184
AE A+ LF+
Sbjct: 485 AERAAKALFE 494
>gi|326490792|dbj|BAJ90063.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 754
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 205/604 (33%), Positives = 336/604 (55%), Gaps = 18/604 (2%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y + G L A+++F MP+ + + N++++A A L+ + M D VS
Sbjct: 55 YARSGRLPLARRLFDAMPDPNLFTRNALLSALAHARLLPDMDRLFASMPQRDA-----VS 109
Query: 62 WSAVIGGFTQNGYDEEAIGM---LFRMQA----EGLEPNARTLSSVLPACARLQKLSLGK 114
++A+I GF+ G A G L R +A + P+ T+S ++ A + L +LG+
Sbjct: 110 YNALIAGFSGAGAPARAAGAYRALLREEAVVDGARVRPSRITMSGMVMAASALGDRALGR 169
Query: 115 EFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
+ H I R GF + F + LVD+Y + G + A ++F + +KN V NT+I G
Sbjct: 170 QVHCQIMRLGFGAYAFTWSPLVDMYAKMGLIGDAKRVFDEMVVKNVVMYNTMITGLLRCK 229
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTF 234
V EAR +F+ M V R I+W +M++G N L EA +FR + +G+ +TF
Sbjct: 230 MVEEARGVFEAM----VDRDSITWTTMVTGLTQNGLQSEALDVFRRM-RAEGVGIDQYTF 284
Query: 235 GSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIEN 294
GS+L AC + + +GK+IHA I + FVG ALV+MY + + + A+ F +
Sbjct: 285 GSILTACGALAASEEGKQIHAYTIRTLYDGNIFVGSALVDMYSKCRSIRLAEAVFRRMTC 344
Query: 295 IENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV 354
+ G+ N A+++FSEM + + P+ +T+G ++S+C++LA++E G Q
Sbjct: 345 KNIISWTAMIVGYGQNGCGEEAVRVFSEMQTDGIKPNDFTLGSVISSCANLASLEEGAQF 404
Query: 355 HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHG 414
H A+ G + + +ALV +Y KCGS++ A + + D VS A+++ YA G
Sbjct: 405 HCMALVSGLRPYITVSSALVTLYGKCGSIEDAHRLFDEMPFHDQVSYTALVSGYAQFGKA 464
Query: 415 KEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTC 473
KE I F ++L G +P+ ++F+ LSAC +G ++ G +F M + + HYTC
Sbjct: 465 KETIDLFEKMLLKGVKPNGVTFIGVLSACSRSGLVEKGCSYFHSMQQDHGIVLLDDHYTC 524
Query: 474 MVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNN 533
M+DL SR+G L EA EFI+++P PD++ W LL C G++E G+ AA+ L++ +P N
Sbjct: 525 MIDLYSRSGRLKEAEEFIRQMPRCPDAIGWATLLSACRLRGDMEIGKWAAENLLKTDPQN 584
Query: 534 TGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRS 593
+YV+L ++ A G WS++A R+ M+DR++ K PGCSWI+ ++ +H F A D+SH S
Sbjct: 585 PASYVLLCSMHASKGEWSEVALLRRGMRDRQVKKEPGCSWIKYKNRVHIFSADDQSHPFS 644
Query: 594 EEIY 597
IY
Sbjct: 645 GTIY 648
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 123/420 (29%), Positives = 197/420 (46%), Gaps = 55/420 (13%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G + DAK+VF M ++ V +N+++T +V EA E M D+ +
Sbjct: 193 MYAKMGLIGDAKRVFDEMVVKNVVMYNTMITGLLRCKMVEEARGVFEAMVDRDS-----I 247
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+ ++ G TQNG EA+ + RM+AEG+ + T S+L AC L GK+ H Y
Sbjct: 248 TWTTMVTGLTQNGLQSEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYT 307
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R + N FV + LVD+Y +C + A +F + + KN +S +IVGY +NG EA
Sbjct: 308 IRTLYDGNIFVGSALVDMYSKCRSIRLAEAVFRRMTCKNIISWTAMIVGYGQNGCGEEAV 367
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+F +M+ DGI+P FT GSV+ +
Sbjct: 368 RVFSEMQ------------------------------------TDGIKPNDFTLGSVISS 391
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA++ SL +G + H +A+ GL+ V ALV +Y + + A FDE+ + +
Sbjct: 392 CANLASLEEGAQFHCMALVSGLRPYITVSSALVTLYGKCGSIEDAHRLFDEMPFHDQVSY 451
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG-------KQ 353
G+ + LF +ML + P+ T +LSACS +E+G +Q
Sbjct: 452 TALVSGYAQFGKAKETIDLFEKMLLKGVKPNGVTFIGVLSACSRSGLVEKGCSYFHSMQQ 511
Query: 354 VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNAMLTAYAMHG 412
H + D H T ++D+Y++ G LK A +++ PD + +L+A + G
Sbjct: 512 DHGIVLL-----DDHY-TCMIDLYSRSGRLKEAEEFIRQMPRCPDAIGWATLLSACRLRG 565
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 114/423 (26%), Positives = 204/423 (48%), Gaps = 42/423 (9%)
Query: 130 FVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHL 189
+V+N L+ Y R G + A ++F N + N ++ + + LF M
Sbjct: 46 YVLNHLLTAYARSGRLPLARRLFDAMPDPNLFTRNALLSALAHARLLPDMDRLFASMP-- 103
Query: 190 GVQRGIISWNSMISGY----VDNSLYDEAFSMFRDLLMRDG--IEPTSFTFGSVLIACAD 243
QR +S+N++I+G+ ++ R+ + DG + P+ T +++A +
Sbjct: 104 --QRDAVSYNALIAGFSGAGAPARAAGAYRALLREEAVVDGARVRPSRITMSGMVMAASA 161
Query: 244 MNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDE--IEN------- 294
+ G+++H + LG + F LV+MY + + A+ FDE ++N
Sbjct: 162 LGDRALGRQVHCQIMRLGFGAYAFTWSPLVDMYAKMGLIGDAKRVFDEMVVKNVVMYNTM 221
Query: 295 IENLLG-KMKEDG---FEPNV----YTWN--------------AMQLFSEMLSLDLTPDI 332
I LL KM E+ FE V TW A+ +F M + + D
Sbjct: 222 ITGLLRCKMVEEARGVFEAMVDRDSITWTTMVTGLTQNGLQSEALDVFRRMRAEGVGIDQ 281
Query: 333 YTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKR 392
YT G IL+AC +LA E GKQ+HAY IR YD ++ +G+ALVDMY+KC S++ A ++R
Sbjct: 282 YTFGSILTACGALAASEEGKQIHAYTIRTLYDGNIFVGSALVDMYSKCRSIRLAEAVFRR 341
Query: 393 ISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTG 452
++ +++S AM+ Y +G G+E + F + G +P+ + S +S+C + S++ G
Sbjct: 342 MTCKNIISWTAMIVGYGQNGCGEEAVRVFSEMQTDGIKPNDFTLGSVISSCANLASLEEG 401
Query: 453 SEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVS 512
++F + ++P + + +V L + G + +A+ ++P D V + AL+ G
Sbjct: 402 AQFHCMALVSGLRPYITVSSALVTLYGKCGSIEDAHRLFDEMPFH-DQVSYTALVSGYAQ 460
Query: 513 HGN 515
G
Sbjct: 461 FGK 463
>gi|449470104|ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
gi|449504088|ref|XP_004162249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 216/652 (33%), Positives = 344/652 (52%), Gaps = 64/652 (9%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETP--- 57
+Y K A+K+F +P+ D ++ +++TA +A G + A E NETP
Sbjct: 57 IYWKSSDFVYARKLFDEIPQPDVIARTTLITAYSALGNLKMAREIF-------NETPLDM 109
Query: 58 -NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARL--QKLSLGK 114
+ V ++A+I G++ AI + M+ +P+ T +SVL A + + G
Sbjct: 110 RDTVFYNAMITGYSHMNDGHSAIELFRAMRWANFQPDDFTFASVLSASTLIFYDERQCG- 168
Query: 115 EFHGYITRNGFMSNPFVVNGLVDVYRRCGD---------MLSALKIFSKFSIKNEVSCNT 165
+ HG + + G P V+N L+ VY +C M SA K+F + +NE T
Sbjct: 169 QMHGTVVKFGIEIFPAVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMPKRNEFIWTT 228
Query: 166 IIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRD 225
+I GY NG++ ARE+ D M Q GI +WN+MISGY+ + L+++A ++FR + +
Sbjct: 229 LITGYVRNGDLTGAREILDTMTE---QPGI-AWNAMISGYLHHGLFEDALTLFRKMRLL- 283
Query: 226 GIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDT----FVGGALVEMYCRYQD 281
G++ T+ SV+ ACAD GK++HA + L D VG L+ +Y +Y
Sbjct: 284 GVQVDESTYTSVISACADGGFFLLGKQVHAYILKNELNPDRDFLLSVGNTLITLYWKYGK 343
Query: 282 LVAAQMAFDE-----IENIENLL------GKMKE-DGF-----EPNVYTW---------- 314
+ A+ F E I LL G+M+E F E N+ TW
Sbjct: 344 VDGARKIFYEMPVKDIITWNTLLSGYVNAGRMEEAKSFFAQMPEKNLLTWTVMISGLAQN 403
Query: 315 ----NAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIG 370
A++LF++M P+ Y ++ACS L +E G+Q+HA + G+DS + +G
Sbjct: 404 GFGEQALKLFNQMKLDGYEPNDYAFAGAITACSVLGALENGRQLHAQIVHLGHDSTLSVG 463
Query: 371 TALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFR 430
A++ MYA+CG ++ AR + + D VS N+M+ A HGHG + I + ++L G
Sbjct: 464 NAMITMYARCGIVEAARTMFLTMPFVDPVSWNSMIAALGQHGHGVKAIELYEQMLKEGIL 523
Query: 431 PDHISFLSALSACVHAGSIKTGSEFFD-LMAYYDVKPSLKHYTCMVDLLSRAGELGEAYE 489
PD +FL+ LSAC HAG ++ G+ +F+ ++ Y + P HY M+DL RAG+ +A
Sbjct: 524 PDRRTFLTVLSACSHAGLVEEGNRYFNSMLENYGIAPGEDHYARMIDLFCRAGKFSDAKN 583
Query: 490 FIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGR 549
I +P + +W ALL GC +HGN++ G AA++L +L P + G YV+L+N++A GR
Sbjct: 584 VIDSMPFEARAPIWEALLAGCRTHGNMDLGIEAAEKLFKLIPQHDGTYVLLSNMYASLGR 643
Query: 550 WSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
W+D+ARTR+ M+DR + K P CSW E +++H F D H IY ++
Sbjct: 644 WNDVARTRKLMRDRGVKKEPACSWTEVENKVHVFLVDDTVHPEVLSIYNYLE 695
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 110/486 (22%), Positives = 203/486 (41%), Gaps = 82/486 (16%)
Query: 107 LQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTI 166
L SL + HG++ +GF +VN L+D+Y + D + A K+F + + ++ T+
Sbjct: 26 LSSYSLARTVHGHVIASGFKLRGHIVNRLIDIYWKSSDFVYARKLFDEIPQPDVIARTTL 85
Query: 167 IVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDG 226
I Y GN+ ARE+F++ R + +N+MI+GY + A +FR + +
Sbjct: 86 ITAYSALGNLKMAREIFNETPL--DMRDTVFYNAMITGYSHMNDGHSAIELFRAMRWAN- 142
Query: 227 IEPTSFTFGSVLIACADM-NSLRKGKEIHALAIALGLQSDTFVGGALVEMYCR------- 278
+P FTF SVL A + R+ ++H + G++ V AL+ +Y +
Sbjct: 143 FQPDDFTFASVLSASTLIFYDERQCGQMHGTVVKFGIEIFPAVLNALLSVYVKCASSPLV 202
Query: 279 --YQDLVAAQMAFDEIENIENLLGKMKEDGF------------------EPNVYTWNAM- 317
+ +A+ FDE+ + G+ +P + WNAM
Sbjct: 203 SSSSLMASARKLFDEMPKRNEFIWTTLITGYVRNGDLTGAREILDTMTEQPGI-AWNAMI 261
Query: 318 -------------QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYD 364
LF +M L + D T ++SAC+ GKQVHAY ++ +
Sbjct: 262 SGYLHHGLFEDALTLFRKMRLLGVQVDESTYTSVISACADGGFFLLGKQVHAYILKNELN 321
Query: 365 SD----VHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAY------------ 408
D + +G L+ +Y K G + AR + + D+++ N +L+ Y
Sbjct: 322 PDRDFLLSVGNTLITLYWKYGKVDGARKIFYEMPVKDIITWNTLLSGYVNAGRMEEAKSF 381
Query: 409 -------------------AMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSI 449
A +G G++ + F ++ G+ P+ +F A++AC G++
Sbjct: 382 FAQMPEKNLLTWTVMISGLAQNGFGEQALKLFNQMKLDGYEPNDYAFAGAITACSVLGAL 441
Query: 450 KTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
+ G + + + +L M+ + +R G + A +P D V W +++
Sbjct: 442 ENGRQLHAQIVHLGHDSTLSVGNAMITMYARCGIVEAARTMFLTMPFV-DPVSWNSMIAA 500
Query: 510 CVSHGN 515
HG+
Sbjct: 501 LGQHGH 506
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 97/269 (36%), Gaps = 75/269 (27%)
Query: 323 MLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGS 382
+L + + + Y + L +L++ + VH + I G+ HI L+D+Y K
Sbjct: 4 VLDVRVLANRYFAQLNLCCPQNLSSYSLARTVHGHVIASGFKLRGHIVNRLIDIYWKSSD 63
Query: 383 LKHARLAYKRISTPDLVSQ---------------------------------NAMLTAYA 409
+AR + I PD++++ NAM+T Y+
Sbjct: 64 FVYARKLFDEIPQPDVIARTTLITAYSALGNLKMAREIFNETPLDMRDTVFYNAMITGYS 123
Query: 410 MHGHGKEGIAHFRRILASGFRPDHISFLSALSAC------------VHAGSIKTGSEFFD 457
G I FR + + F+PD +F S LSA +H +K G E F
Sbjct: 124 HMNDGHSAIELFRAMRWANFQPDDFTFASVLSASTLIFYDERQCGQMHGTVVKFGIEIFP 183
Query: 458 -----LMAYY----------------------DVKPSLKHY--TCMVDLLSRAGELGEAY 488
L++ Y D P + T ++ R G+L A
Sbjct: 184 AVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMPKRNEFIWTTLITGYVRNGDLTGAR 243
Query: 489 EFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
E + + P + W A++ G + HG E
Sbjct: 244 EILDTMTEQP-GIAWNAMISGYLHHGLFE 271
>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
Length = 784
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 203/589 (34%), Positives = 321/589 (54%), Gaps = 42/589 (7%)
Query: 14 VFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNG 73
V +M E+D + N++V G V A E+M D +VSW+A+I G NG
Sbjct: 135 VVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSD-----VVSWNALISGCVLNG 189
Query: 74 YDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVN 133
+D AI +L +M++ GL PN LSS+L ACA LG++ HG++ + S+ ++
Sbjct: 190 HDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGV 249
Query: 134 GLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQR 193
GLVD+Y + N + +A ++FD M H R
Sbjct: 250 GLVDMYAK-------------------------------NHFLDDAMKVFDWMSH----R 274
Query: 194 GIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEI 253
+I WN++ISG +DEAFS+F L ++G+ T +VL + A + + +++
Sbjct: 275 DLILWNALISGCSHGGRHDEAFSIFYGL-RKEGLGVNRTTLAAVLKSTASLEAASATRQV 333
Query: 254 HALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYT 313
HALA +G D V L++ Y + L A F+E + + + +
Sbjct: 334 HALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHG 393
Query: 314 WNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTAL 373
A++LF EML L PD + + +L+AC+SL+ E+GKQVHA+ I+ + SD G AL
Sbjct: 394 EGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNAL 453
Query: 374 VDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDH 433
V YAKCGS++ A LA+ + +VS +AM+ A HGHGK + F R++ G P+H
Sbjct: 454 VYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNH 513
Query: 434 ISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIK 492
I+ S L AC HAG + +F+ M + + + +HY+CM+DLL RAG+L +A E +
Sbjct: 514 ITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVN 573
Query: 493 KIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSD 552
+P ++ +WGALLG H + E G++AA++L LEP +G +V+LAN +A +G W++
Sbjct: 574 SMPFQANASVWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASSGMWNE 633
Query: 553 LARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
+A+ R+ MKD + K P SW+E +D++H F D+SH ++EIY+ +D
Sbjct: 634 VAKVRKLMKDSNIKKEPAMSWVEVKDKVHTFIVGDKSHPMTKEIYSKLD 682
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 100/358 (27%), Positives = 166/358 (46%), Gaps = 38/358 (10%)
Query: 85 MQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGD 144
M+AEG+ N L VL Q LG + H GF S+ FV N LV +Y G
Sbjct: 1 MRAEGVCCNEFALPVVLKCVPDAQ---LGAQVHAMAMATGFGSDVFVANALVAMYGGFGF 57
Query: 145 MLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISG 204
M +AR +FD+ G +R +SWN ++S
Sbjct: 58 M-------------------------------DDARRVFDEA---GSERNAVSWNGLMSA 83
Query: 205 YVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQS 264
YV N +A +F +++ GI+PT F F V+ AC ++ G+++HA+ + +G +
Sbjct: 84 YVKNDQCGDAIQVFGEMVW-SGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEK 142
Query: 265 DTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEML 324
D F ALV+MY + + A + F+++ + + + G N + A++L +M
Sbjct: 143 DVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMK 202
Query: 325 SLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLK 384
S L P+++ + IL AC+ + G+Q+H + I+ DSD +IG LVDMYAK L
Sbjct: 203 SSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLD 262
Query: 385 HARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSA 442
A + +S DL+ NA+++ + G E + F + G + + + L +
Sbjct: 263 DAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKS 320
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 108/452 (23%), Positives = 183/452 (40%), Gaps = 102/452 (22%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G +D A +F+ MP+ D VSWN++++ C NG
Sbjct: 153 MYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNG----------------------- 189
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+D AI +L +M++ GL PN LSS+L ACA LG++ HG++
Sbjct: 190 -------------HDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFM 236
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ S+ ++ GLVD+Y + + A+K+F S ++ + N +I G G EA
Sbjct: 237 IKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAF 296
Query: 181 ELFDQM--EHLGVQRGIISW---------------------------------NSMISGY 205
+F + E LGV R ++ N +I Y
Sbjct: 297 SIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSY 356
Query: 206 VDNSLYDEAFSMFRDL------------------------------LMRDGIEPTSFTFG 235
S +A +F + ++R G+EP F
Sbjct: 357 WKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLS 416
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
S+L ACA +++ +GK++HA I SD F G ALV Y + + A++AF +
Sbjct: 417 SLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPER 476
Query: 296 ENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ-V 354
+ G + + A++LF M+ + P+ T+ +L AC+ ++ K+
Sbjct: 477 GVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYF 536
Query: 355 HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHA 386
++ G D + ++D+ + G L A
Sbjct: 537 NSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDA 568
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 144/293 (49%), Gaps = 10/293 (3%)
Query: 225 DGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVA 284
+G+ F VL D + G ++HA+A+A G SD FV ALV MY + +
Sbjct: 4 EGVCCNEFALPVVLKCVPDA---QLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDD 60
Query: 285 AQMAFDEIENIENLL---GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSA 341
A+ FDE + N + G M + N +A+Q+F EM+ + P + +++A
Sbjct: 61 ARRVFDEAGSERNAVSWNGLMS--AYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNA 118
Query: 342 CSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQ 401
C+ ++ G+QVHA +R GY+ DV ALVDMY K G + A + ++++ D+VS
Sbjct: 119 CTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSW 178
Query: 402 NAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY 461
NA+++ ++GH I ++ +SG P+ S L AC AG+ G + M
Sbjct: 179 NALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIK 238
Query: 462 YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
+ +VD+ ++ L +A + + D ++W AL+ GC SHG
Sbjct: 239 ANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSH-RDLILWNALISGC-SHG 289
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 2/168 (1%)
Query: 349 ERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRI-STPDLVSQNAMLTA 407
+ G QVHA A+ G+ SDV + ALV MY G + AR + S + VS N +++A
Sbjct: 24 QLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSA 83
Query: 408 YAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPS 467
Y + + I F ++ SG +P F ++AC + +I G + ++ +
Sbjct: 84 YVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKD 143
Query: 468 LKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
+ +VD+ + G + A +K+P D V W AL+ GCV +G+
Sbjct: 144 VFTANALVDMYVKMGRVDIASVIFEKMP-DSDVVSWNALISGCVLNGH 190
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 83/188 (44%), Gaps = 11/188 (5%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y KCGS++DA+ F +PER VSW++++ A +G ALE RM + PN ++
Sbjct: 457 YAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVD-EGINPNHIT 515
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
++V+ G +EA M+ G++ S ++ R KL E +
Sbjct: 516 MTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMEL---V 572
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGD-MLSALKIFSKFSIKNEVSCNTIIVG--YCENG--- 174
F +N V L+ R D L L F ++ E S +++ Y +G
Sbjct: 573 NSMPFQANASVWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASSGMWN 632
Query: 175 NVAEAREL 182
VA+ R+L
Sbjct: 633 EVAKVRKL 640
>gi|14165320|gb|AAK55452.1|AC069300_7 putative PPR repeat protein [Oryza sativa Japonica Group]
gi|31433484|gb|AAP54989.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 905
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 217/673 (32%), Positives = 328/673 (48%), Gaps = 114/673 (16%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKC SLDDA F MPER N V
Sbjct: 235 MYGKCRSLDDALCFFYGMPER------------------------------------NWV 258
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW A I G QN + + MQ GL + + +S +CA + L+ G++ H +
Sbjct: 259 SWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHA 318
Query: 121 TRNGFMSNPFV----------VNGLVDVYR---------------------RCGDMLSAL 149
+N F S+ V N L D R R G + A+
Sbjct: 319 IKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAM 378
Query: 150 KIFSKFSIKN--------------------------EVSCNTIIVGY----CENGNV--- 176
+F +F I++ +V C I G+ C N V
Sbjct: 379 GLF-QFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDL 437
Query: 177 -------AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEP 229
EA +F M+ Q+ +SWN++I+ N YD+ F ++L R G++P
Sbjct: 438 YGKCKALMEAYLIFQGMK----QKDSVSWNAIIAALEQNGHYDDTILHFNEML-RFGMKP 492
Query: 230 TSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAF 289
FT+GSVL ACA + SL G +H I GL SD FV +V+MYC+ + AQ
Sbjct: 493 DDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLH 552
Query: 290 DEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATME 349
D I + + GF N + A + FSEML + L PD +T +L C++LAT+E
Sbjct: 553 DRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIE 612
Query: 350 RGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYA 409
GKQ+H I+ D +I + LVDMYAKCG + + L ++++ D VS NAM+ YA
Sbjct: 613 LGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYA 672
Query: 410 MHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSL 468
+HG G E + F R+ P+H +F++ L AC H G G +F LM +Y ++P L
Sbjct: 673 LHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQL 732
Query: 469 KHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIE 528
+H+ CMVD+L R+ EA +FI +P D+V+W LL C ++E ++AA ++
Sbjct: 733 EHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEIAELAASNVLL 792
Query: 529 LEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDR 588
L+P+++ Y++L+N++A +G+W+D++RTR+ +K R+ K PGCSWIE + E+H F D+
Sbjct: 793 LDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWIEVQSEMHGFLVGDK 852
Query: 589 SHDRSEEIYTIID 601
+H RS E+Y +++
Sbjct: 853 AHPRSGELYEMLN 865
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 145/509 (28%), Positives = 238/509 (46%), Gaps = 42/509 (8%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +C A++VF MP RD VSWN+++TA + G + A+ + M P++V
Sbjct: 103 MYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPD-----PDVV 157
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A++ G+ Q G +E++ + M G+ P+ T + +L +C+ L++LSLG + H
Sbjct: 158 SWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALA 217
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G + + LVD+Y +C + AL F +N VS I G +N
Sbjct: 218 VKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGL 277
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
ELF +M+ LG+ G+ S + S +
Sbjct: 278 ELFIEMQRLGL----------------------------------GVSQPS--YASAFRS 301
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA M+ L G+++HA AI SD VG A+V++Y + L A+ AF + N
Sbjct: 302 CAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETS 361
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G AM LF M+ + D+ ++ + SAC+ +G+QVH AI+
Sbjct: 362 NAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIK 421
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
G+D D+ + A++D+Y KC +L A L ++ + D VS NA++ A +GH + I H
Sbjct: 422 SGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILH 481
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSR 480
F +L G +PD ++ S L AC S++ G D + + + +VD+ +
Sbjct: 482 FNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCK 541
Query: 481 AGELGEAYEFIKKIPMAPDSVMWGALLGG 509
G + EA + +I V W A+L G
Sbjct: 542 CGIIDEAQKLHDRIG-GQQVVSWNAILSG 569
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 138/489 (28%), Positives = 232/489 (47%), Gaps = 52/489 (10%)
Query: 84 RMQAEGLEPN----AR-TLSSVLPACARL--QKLSLGKEFHGYITRNGFMSNPFVVNGLV 136
RM AE +P AR T S V +CA+ + L+ G+ H + +GF+ FV N L+
Sbjct: 42 RMPAEQQQPPPVAPARVTFSRVFQSCAQAGREALAAGRAAHARMVVSGFVPTAFVSNCLL 101
Query: 137 DVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGII 196
+Y RC A ++F ++ VS NT++ Y G+++ A LFD M ++
Sbjct: 102 QMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMP----DPDVV 157
Query: 197 SWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHAL 256
SWN+++SGY ++ E+ +F ++ R G+ P TF +L +C+ + L G ++HAL
Sbjct: 158 SWNALVSGYCQRGMFQESVDLFVEM-ARRGVSPDRTTFAVLLKSCSALEELSLGVQVHAL 216
Query: 257 AIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNA 316
A+ GL+ D G ALV+MY + + L A F + + G N
Sbjct: 217 AVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRG 276
Query: 317 MQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDM 376
++LF EM L L + +C++++ + G+Q+HA+AI+ + SD +GTA+VD+
Sbjct: 277 LELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDV 336
Query: 377 YAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISF 436
YAK SL AR A+ + + + NAM+ G G E + F+ ++ S R D +S
Sbjct: 337 YAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSL 396
Query: 437 LSALSAC-----------VHAGSIKTGSEFFD------------------LMAYYDVKPS 467
SAC VH +IK+G FD LM Y +
Sbjct: 397 SGVFSACAETKGYFQGQQVHCLAIKSG---FDVDICVNNAVLDLYGKCKALMEAYLIFQG 453
Query: 468 LKH-----YTCMVDLLSRAGELGEA---YEFIKKIPMAPDSVMWGALLGGCVSHGNLEFG 519
+K + ++ L + G + + + + M PD +G++L C + +LE+G
Sbjct: 454 MKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYG 513
Query: 520 QIAADRLIE 528
+ D++I+
Sbjct: 514 LMVHDKVIK 522
>gi|15221566|ref|NP_177059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75333633|sp|Q9CAA8.1|PP108_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g68930
gi|12323213|gb|AAG51585.1|AC011665_6 hypothetical protein [Arabidopsis thaliana]
gi|332196743|gb|AEE34864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 743
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 194/593 (32%), Positives = 327/593 (55%), Gaps = 13/593 (2%)
Query: 11 AKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFT 70
A++VF +P+ + SWN+++ A + GL+ E E++ D V+W+ +I G++
Sbjct: 60 ARRVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDG-----VTWNVLIEGYS 114
Query: 71 QNGYDEEAIGMLFRMQAEGLEPNAR-TLSSVLPACARLQKLSLGKEFHGYITRNGFMSNP 129
+G A+ M + R TL ++L + +SLGK+ HG + + GF S
Sbjct: 115 LSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYL 174
Query: 130 FVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHL 189
V + L+ +Y G + A K+F +N V N+++ G G + +A +LF ME
Sbjct: 175 LVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGME-- 232
Query: 190 GVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRK 249
+ +SW +MI G N L EA FR++ ++ G++ + FGSVL AC + ++ +
Sbjct: 233 ---KDSVSWAAMIKGLAQNGLAKEAIECFREMKVQ-GLKMDQYPFGSVLPACGGLGAINE 288
Query: 250 GKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEP 309
GK+IHA I Q +VG AL++MYC+ + L A+ FD ++ + G+
Sbjct: 289 GKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQ 348
Query: 310 NVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHI 369
A+++F +M + PD YT+G +SAC++++++E G Q H AI G V +
Sbjct: 349 TGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTV 408
Query: 370 GTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGF 429
+LV +Y KCG + + + ++ D VS AM++AYA G E I F +++ G
Sbjct: 409 SNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGL 468
Query: 430 RPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMVDLLSRAGELGEAY 488
+PD ++ +SAC AG ++ G +F LM + Y + PS+ HY+CM+DL SR+G L EA
Sbjct: 469 KPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAM 528
Query: 489 EFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAG 548
FI +P PD++ W LL C + GNLE G+ AA+ LIEL+P++ Y +L++++A G
Sbjct: 529 RFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKG 588
Query: 549 RWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
+W +A+ R+ M+++ + K PG SWI+ + ++H F A D S ++IY ++
Sbjct: 589 KWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLE 641
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 123/454 (27%), Positives = 202/454 (44%), Gaps = 79/454 (17%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY G + DAKKVF + +R+ V +NS++ A G++ +AL+ M + V
Sbjct: 183 MYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEK------DSV 236
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A+I G QNG +EAI M+ +GL+ + SVLPAC L ++ GK+ H I
Sbjct: 237 SWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACI 296
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R F + +V + L+D+Y +C + A +F + KN VS ++VGY + G EA
Sbjct: 297 IRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAV 356
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
++F M+ R GI+P +T G + A
Sbjct: 357 KIFLDMQ------------------------------------RSGIDPDHYTLGQAISA 380
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA+++SL +G + H AI GL V +LV +Y + D+ + F+E+ + +
Sbjct: 381 CANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSW 440
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
+ +QLF +M+ L PD T+ ++SACS +E+G Q + +
Sbjct: 441 TAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKG-QRYFKLMT 499
Query: 361 CGYDSDVHIG--TALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGI 418
Y IG + ++D++++ G L+ A
Sbjct: 500 SEYGIVPSIGHYSCMIDLFSRSGRLEEA-------------------------------- 527
Query: 419 AHFRRILASGFRPDHISFLSALSACVHAGSIKTG 452
R I F PD I + + LSAC + G+++ G
Sbjct: 528 --MRFINGMPFPPDAIGWTTLLSACRNKGNLEIG 559
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 131/512 (25%), Positives = 210/512 (41%), Gaps = 78/512 (15%)
Query: 114 KEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCEN 173
K HG I R F+ N +V Y A ++F + N S N +++ Y +
Sbjct: 26 KMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKA 85
Query: 174 GNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFT 233
G ++E F+++ R ++WN +I GY + L A + ++ T T
Sbjct: 86 GLISEMESTFEKLP----DRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVT 141
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCR--------------- 278
++L + + GK+IH I LG +S VG L+ MY
Sbjct: 142 LMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLD 201
Query: 279 ------YQDLVAAQMAFDEIENIENLLGKMKED---------GFEPNVYTWNAMQLFSEM 323
Y L+ +A IE+ L M++D G N A++ F EM
Sbjct: 202 DRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREM 261
Query: 324 LSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSL 383
L D Y G +L AC L + GKQ+HA IR + +++G+AL+DMY KC L
Sbjct: 262 KVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCL 321
Query: 384 KHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSAC 443
+A+ + R+ ++VS AM+ Y G +E + F + SG PDH + A+SAC
Sbjct: 322 HYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISAC 381
Query: 444 VHAGSIKTGSEFF------DLMAYYDVKPSL-------------------------KHYT 472
+ S++ GS+F L+ Y V SL +T
Sbjct: 382 ANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWT 441
Query: 473 CMVDLLSRAGELGEAYEFIKKI---PMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIEL 529
MV ++ G E + K+ + PD V ++ C G +E GQ R +L
Sbjct: 442 AMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQ----RYFKL 497
Query: 530 EPN------NTGNYVMLANLFAYAGRWSDLAR 555
+ + G+Y + +LF+ +GR + R
Sbjct: 498 MTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMR 529
>gi|297610920|ref|NP_001065364.2| Os10g0558600 [Oryza sativa Japonica Group]
gi|255679629|dbj|BAF27201.2| Os10g0558600 [Oryza sativa Japonica Group]
Length = 863
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 217/673 (32%), Positives = 328/673 (48%), Gaps = 114/673 (16%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKC SLDDA F MPER N V
Sbjct: 193 MYGKCRSLDDALCFFYGMPER------------------------------------NWV 216
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW A I G QN + + MQ GL + + +S +CA + L+ G++ H +
Sbjct: 217 SWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHA 276
Query: 121 TRNGFMSNPFV----------VNGLVDVYR---------------------RCGDMLSAL 149
+N F S+ V N L D R R G + A+
Sbjct: 277 IKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAM 336
Query: 150 KIFSKFSIKN--------------------------EVSCNTIIVGY----CENGNV--- 176
+F +F I++ +V C I G+ C N V
Sbjct: 337 GLF-QFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDL 395
Query: 177 -------AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEP 229
EA +F M+ Q+ +SWN++I+ N YD+ F ++L R G++P
Sbjct: 396 YGKCKALMEAYLIFQGMK----QKDSVSWNAIIAALEQNGHYDDTILHFNEML-RFGMKP 450
Query: 230 TSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAF 289
FT+GSVL ACA + SL G +H I GL SD FV +V+MYC+ + AQ
Sbjct: 451 DDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLH 510
Query: 290 DEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATME 349
D I + + GF N + A + FSEML + L PD +T +L C++LAT+E
Sbjct: 511 DRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIE 570
Query: 350 RGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYA 409
GKQ+H I+ D +I + LVDMYAKCG + + L ++++ D VS NAM+ YA
Sbjct: 571 LGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYA 630
Query: 410 MHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSL 468
+HG G E + F R+ P+H +F++ L AC H G G +F LM +Y ++P L
Sbjct: 631 LHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQL 690
Query: 469 KHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIE 528
+H+ CMVD+L R+ EA +FI +P D+V+W LL C ++E ++AA ++
Sbjct: 691 EHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEIAELAASNVLL 750
Query: 529 LEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDR 588
L+P+++ Y++L+N++A +G+W+D++RTR+ +K R+ K PGCSWIE + E+H F D+
Sbjct: 751 LDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWIEVQSEMHGFLVGDK 810
Query: 589 SHDRSEEIYTIID 601
+H RS E+Y +++
Sbjct: 811 AHPRSGELYEMLN 823
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 145/509 (28%), Positives = 238/509 (46%), Gaps = 42/509 (8%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +C A++VF MP RD VSWN+++TA + G + A+ + M P++V
Sbjct: 61 MYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPD-----PDVV 115
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A++ G+ Q G +E++ + M G+ P+ T + +L +C+ L++LSLG + H
Sbjct: 116 SWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALA 175
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G + + LVD+Y +C + AL F +N VS I G +N
Sbjct: 176 VKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGL 235
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
ELF +M+ LG+ G+ S + S +
Sbjct: 236 ELFIEMQRLGL----------------------------------GVSQPS--YASAFRS 259
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA M+ L G+++HA AI SD VG A+V++Y + L A+ AF + N
Sbjct: 260 CAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETS 319
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G AM LF M+ + D+ ++ + SAC+ +G+QVH AI+
Sbjct: 320 NAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIK 379
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
G+D D+ + A++D+Y KC +L A L ++ + D VS NA++ A +GH + I H
Sbjct: 380 SGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILH 439
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSR 480
F +L G +PD ++ S L AC S++ G D + + + +VD+ +
Sbjct: 440 FNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCK 499
Query: 481 AGELGEAYEFIKKIPMAPDSVMWGALLGG 509
G + EA + +I V W A+L G
Sbjct: 500 CGIIDEAQKLHDRIG-GQQVVSWNAILSG 527
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 133/484 (27%), Positives = 228/484 (47%), Gaps = 47/484 (9%)
Query: 84 RMQAEGLEPNARTLSSVLPACARL--QKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRR 141
+ Q + P T S V +CA+ + L+ G+ H + +GF+ FV N L+ +Y R
Sbjct: 5 QQQPPPVAPARVTFSRVFQSCAQAGREALAAGRAAHARMVVSGFVPTAFVSNCLLQMYAR 64
Query: 142 CGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSM 201
C A ++F ++ VS NT++ Y G+++ A LFD M ++SWN++
Sbjct: 65 CAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMP----DPDVVSWNAL 120
Query: 202 ISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALG 261
+SGY ++ E+ +F ++ R G+ P TF +L +C+ + L G ++HALA+ G
Sbjct: 121 VSGYCQRGMFQESVDLFVEM-ARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTG 179
Query: 262 LQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFS 321
L+ D G ALV+MY + + L A F + + G N ++LF
Sbjct: 180 LEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFI 239
Query: 322 EMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCG 381
EM L L + +C++++ + G+Q+HA+AI+ + SD +GTA+VD+YAK
Sbjct: 240 EMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKAN 299
Query: 382 SLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALS 441
SL AR A+ + + + NAM+ G G E + F+ ++ S R D +S S
Sbjct: 300 SLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFS 359
Query: 442 AC-----------VHAGSIKTGSEFFD------------------LMAYYDVKPSLKH-- 470
AC VH +IK+G FD LM Y + +K
Sbjct: 360 ACAETKGYFQGQQVHCLAIKSG---FDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKD 416
Query: 471 ---YTCMVDLLSRAGELGEA---YEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAAD 524
+ ++ L + G + + + + M PD +G++L C + +LE+G + D
Sbjct: 417 SVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHD 476
Query: 525 RLIE 528
++I+
Sbjct: 477 KVIK 480
>gi|222613253|gb|EEE51385.1| hypothetical protein OsJ_32436 [Oryza sativa Japonica Group]
Length = 863
Score = 356 bits (913), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 217/673 (32%), Positives = 328/673 (48%), Gaps = 114/673 (16%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKC SLDDA F MPER N V
Sbjct: 193 MYGKCRSLDDALCFFYGMPER------------------------------------NWV 216
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW A I G QN + + MQ GL + + +S +CA + L+ G++ H +
Sbjct: 217 SWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHA 276
Query: 121 TRNGFMSNPFV----------VNGLVDVYR---------------------RCGDMLSAL 149
+N F S+ V N L D R R G + A+
Sbjct: 277 IKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAM 336
Query: 150 KIFSKFSIKN--------------------------EVSCNTIIVGY----CENGNV--- 176
+F +F I++ +V C I G+ C N V
Sbjct: 337 GLF-QFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDL 395
Query: 177 -------AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEP 229
EA +F M+ Q+ +SWN++I+ N YD+ F ++L R G++P
Sbjct: 396 YGKCKALMEAYLIFQGMK----QKDSVSWNAIIAALEQNGHYDDTILHFNEML-RFGMKP 450
Query: 230 TSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAF 289
FT+GSVL ACA + SL G +H I GL SD FV +V+MYC+ + AQ
Sbjct: 451 DDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLH 510
Query: 290 DEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATME 349
D I + + GF N + A + FSEML + L PD +T +L C++LAT+E
Sbjct: 511 DRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIE 570
Query: 350 RGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYA 409
GKQ+H I+ D +I + LVDMYAKCG + + L ++++ D VS NAM+ YA
Sbjct: 571 LGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYA 630
Query: 410 MHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSL 468
+HG G E + F R+ P+H +F++ L AC H G G +F LM +Y ++P L
Sbjct: 631 LHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQL 690
Query: 469 KHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIE 528
+H+ CMVD+L R+ EA +FI +P D+V+W LL C ++E ++AA ++
Sbjct: 691 EHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEIAELAASNVLL 750
Query: 529 LEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDR 588
L+P+++ Y++L+N++A +G+W+D++RTR+ +K R+ K PGCSWIE + E+H F D+
Sbjct: 751 LDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWIEVQSEMHGFLVGDK 810
Query: 589 SHDRSEEIYTIID 601
+H RS E+Y +++
Sbjct: 811 AHPRSGELYEMLN 823
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 145/509 (28%), Positives = 238/509 (46%), Gaps = 42/509 (8%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +C A++VF MP RD VSWN+++TA + G + A+ + M P++V
Sbjct: 61 MYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPD-----PDVV 115
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A++ G+ Q G +E++ + M G+ P+ T + +L +C+ L++LSLG + H
Sbjct: 116 SWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALA 175
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G + + LVD+Y +C + AL F +N VS I G +N
Sbjct: 176 VKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGL 235
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
ELF +M+ LG+ G+ S + S +
Sbjct: 236 ELFIEMQRLGL----------------------------------GVSQPS--YASAFRS 259
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA M+ L G+++HA AI SD VG A+V++Y + L A+ AF + N
Sbjct: 260 CAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETS 319
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G AM LF M+ + D+ ++ + SAC+ +G+QVH AI+
Sbjct: 320 NAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIK 379
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
G+D D+ + A++D+Y KC +L A L ++ + D VS NA++ A +GH + I H
Sbjct: 380 SGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILH 439
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSR 480
F +L G +PD ++ S L AC S++ G D + + + +VD+ +
Sbjct: 440 FNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCK 499
Query: 481 AGELGEAYEFIKKIPMAPDSVMWGALLGG 509
G + EA + +I V W A+L G
Sbjct: 500 CGIIDEAQKLHDRIG-GQQVVSWNAILSG 527
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 134/484 (27%), Positives = 229/484 (47%), Gaps = 47/484 (9%)
Query: 84 RMQAEGLEPNARTLSSVLPACARL--QKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRR 141
+ Q + P T S V +CA+ + L+ G+ H + +GF+ N FV N L+ +Y R
Sbjct: 5 QQQPPPVAPARVTFSRVFQSCAQAGREALAAGRAAHARMVVSGFVPNAFVSNCLLQMYAR 64
Query: 142 CGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSM 201
C A ++F ++ VS NT++ Y G+++ A LFD M ++SWN++
Sbjct: 65 CAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMP----DPDVVSWNAL 120
Query: 202 ISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALG 261
+SGY ++ E+ +F ++ R G+ P TF +L +C+ + L G ++HALA+ G
Sbjct: 121 VSGYCQRGMFQESVDLFVEM-ARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTG 179
Query: 262 LQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFS 321
L+ D G ALV+MY + + L A F + + G N ++LF
Sbjct: 180 LEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFI 239
Query: 322 EMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCG 381
EM L L + +C++++ + G+Q+HA+AI+ + SD +GTA+VD+YAK
Sbjct: 240 EMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKAN 299
Query: 382 SLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALS 441
SL AR A+ + + + NAM+ G G E + F+ ++ S R D +S S
Sbjct: 300 SLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFS 359
Query: 442 AC-----------VHAGSIKTGSEFFD------------------LMAYYDVKPSLKH-- 470
AC VH +IK+G FD LM Y + +K
Sbjct: 360 ACAETKGYFQGQQVHCLAIKSG---FDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKD 416
Query: 471 ---YTCMVDLLSRAGELGEA---YEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAAD 524
+ ++ L + G + + + + M PD +G++L C + +LE+G + D
Sbjct: 417 SVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHD 476
Query: 525 RLIE 528
++I+
Sbjct: 477 KVIK 480
>gi|147856413|emb|CAN82500.1| hypothetical protein VITISV_004914 [Vitis vinifera]
Length = 1408
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 195/621 (31%), Positives = 324/621 (52%), Gaps = 62/621 (9%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
YG+C L+ A +VF MP + + WN + L+ ++ L
Sbjct: 719 YGRCWGLEKANQVFHEMPNPEALLWNEAII--------------------LNLQSEKL-- 756
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
++ + + +MQ L+ T+ VL AC ++ L+ K+ HGY+
Sbjct: 757 --------------QKGVELFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVF 802
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
R G S+ + N L+ +Y + G + A ++F +N S N++I Y G + +A
Sbjct: 803 RFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWS 862
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
LF ++E ++ I++WN ++SG+ + +E ++ + + +G +P S + SVL A
Sbjct: 863 LFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRM-QGEGFKPNSSSMTSVLQAI 921
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE----- 296
+++ L GKE H + G D +VG +L++MY + L +AQ FD ++N
Sbjct: 922 SELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLXSAQAVFDNMKNRNIFAWN 981
Query: 297 ----------------NLLGKMKEDGFEPNVYTWNAMQLFSEMLSLD---LTPDIYTVGI 337
LL +M+++G +P++ TWN M M P+ ++
Sbjct: 982 SLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCARKAFMPNSASITC 1041
Query: 338 ILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPD 397
+L AC+SL+ +++GK++H +IR G+ DV + TAL+DMY+K SLK+A ++RI
Sbjct: 1042 LLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKT 1101
Query: 398 LVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFD 457
L S N M+ +A+ G GKE I+ F + G PD I+F + LSAC ++G I G ++FD
Sbjct: 1102 LASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFD 1161
Query: 458 -LMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNL 516
++ Y + P L+HY CMVDLL RAG L EA++ I +P+ PD+ +WGALLG C H NL
Sbjct: 1162 SMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRIHKNL 1221
Query: 517 EFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIED 576
F + AA L +LEPNN+ NY+++ NL++ RW D+ R+ M + SWI+
Sbjct: 1222 XFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLRELMGAAGVRNRQVWSWIQI 1281
Query: 577 RDEIHKFRASDRSHDRSEEIY 597
+H F + ++ H + +IY
Sbjct: 1282 NQRVHVFSSDEKPHPDAGKIY 1302
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 136/418 (32%), Positives = 212/418 (50%), Gaps = 25/418 (5%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G L+ A++VF M R+ SWNS++++ AA G + +A + S D + P++V
Sbjct: 819 MYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMK-PDIV 877
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+ ++ G +GY EE + +L RMQ EG +PN+ +++SVL A + L L++GKE HGY+
Sbjct: 878 TWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYV 937
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
RNGF + +V L+D+Y + + SA +F +N + N+++ GY G +A
Sbjct: 938 LRNGFDCDVYVGTSLIDMYVKNHSLXSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDAL 997
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
L +QME G++ +++WN MISGY +AF P S + +L A
Sbjct: 998 RLLNQMEKEGIKPDLVTWNGMISGYAMWGCARKAFM------------PNSASITCLLRA 1045
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA ++ L+KGKEIH L+I G D FV AL++MY + L A F I+N
Sbjct: 1046 CASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASW 1105
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
GF A+ +F+EM + + PD T +LSAC + + G + I
Sbjct: 1106 NCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMI- 1164
Query: 361 CGYDSDVHIGTAL------VDMYAKCGSLKHA-RLAYKRISTPDLVSQNAMLTAYAMH 411
+D I L VD+ + G L A L + PD A+L + +H
Sbjct: 1165 ----TDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRIH 1218
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/497 (20%), Positives = 197/497 (39%), Gaps = 96/497 (19%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFR-MQAEGLEPNARTLSSVLPACARLQKLSLGKEF 116
N + W++ + F + + +F+ + +G+ ++ S L C R+ + LG E
Sbjct: 637 NYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEI 696
Query: 117 HGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNV 176
HG + + GF + ++ L++ Y RC + A ++F + + N I+ ++ +
Sbjct: 697 HGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKL 756
Query: 177 AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGS 236
+ ELF +M+ FS ++ + T
Sbjct: 757 QKGVELFRKMQ---------------------------FSF---------LKAETATIVR 780
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
VL AC M +L K+IH GL SD + L+ MY + L A+ FD +EN
Sbjct: 781 VLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRN 840
Query: 297 ---------------------NLLGKMKEDGFEPNVYTWN--------------AMQLFS 321
+L +++ +P++ TWN + +
Sbjct: 841 TSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQ 900
Query: 322 EMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCG 381
M P+ ++ +L A S L + GK+ H Y +R G+D DV++GT+L+DMY K
Sbjct: 901 RMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNH 960
Query: 382 SLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHI------- 434
SL A+ + + ++ + N++++ Y+ G ++ + ++ G +PD +
Sbjct: 961 SLXSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMIS 1020
Query: 435 -----------------SFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDL 477
S L AC ++ G E L + T ++D+
Sbjct: 1021 GYAMWGCARKAFMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDM 1080
Query: 478 LSRAGELGEAYEFIKKI 494
S++ L A++ ++I
Sbjct: 1081 YSKSSSLKNAHKVFRRI 1097
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/236 (19%), Positives = 92/236 (38%), Gaps = 34/236 (14%)
Query: 316 AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVD 375
+++F E+ + D + L C+ + + G ++H I+ G+D DV++ AL++
Sbjct: 658 VLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMN 717
Query: 376 MYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHIS 435
Y +C L+ A + + P+ + N + ++G+ FR++ S + + +
Sbjct: 718 FYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETAT 777
Query: 436 FLSALSACVHAGSIKTGSEFF----------------DLMAYYDVKPSLK---------- 469
+ L AC G++ + L++ Y L+
Sbjct: 778 IVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSME 837
Query: 470 -----HYTCMVDLLSRAGELGEAYEFIKKIP---MAPDSVMWGALLGGCVSHGNLE 517
+ M+ + G L +A+ ++ M PD V W LL G HG E
Sbjct: 838 NRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKE 893
>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 694
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 180/544 (33%), Positives = 300/544 (55%), Gaps = 34/544 (6%)
Query: 53 DNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSL 112
D P + W+A+I G+++N + ++A+ M +MQ + P++ T +L AC L L +
Sbjct: 78 DLPRPQVFPWNAIIRGYSRNNHFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQM 137
Query: 113 GKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCE 172
G+ H + R GF ++ FV NGL+ +Y +C + A +F +
Sbjct: 138 GRFVHAQVFRLGFEADVFVQNGLIALYAKCRRLGCARTVFEGLPLP-------------- 183
Query: 173 NGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSF 232
+R I+SW +++S Y N EA +F + D ++P
Sbjct: 184 -------------------ERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMD-VKPDCV 223
Query: 233 TFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI 292
SVL A + L +G+ IHA + +GL+++ + +L MY + + A++ FD++
Sbjct: 224 ALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLISLNTMYAKCGQVATAKILFDKM 283
Query: 293 ENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGK 352
++ +L G+ N + +A+ LF EM++ D+ PD ++ +SAC+ + ++E+ +
Sbjct: 284 KSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTISITSAISACAQVGSLEQAR 343
Query: 353 QVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHG 412
+ Y R Y DV I +AL+DM+AKCGS++ AR + R D+V +AM+ Y +HG
Sbjct: 344 WMDEYVSRSDYRDDVFISSALIDMFAKCGSVECARSVFDRTLDRDVVVWSAMIVGYGLHG 403
Query: 413 HGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYT 472
+E I+ +R + G P+ ++FL L AC H+G ++ G FF+ MA + + P +HY
Sbjct: 404 QAREAISLYRAMERDGVHPNDVTFLGLLIACNHSGMVREGWWFFNRMADHKINPQQQHYA 463
Query: 473 CMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPN 532
C++DLL RAG L +AYE IK +P+ P +WGALL C H ++E G+ AA +L ++P+
Sbjct: 464 CIIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGKYAAQQLFSIDPS 523
Query: 533 NTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDR 592
NTG+YV L+NL+A A W +A R +MK++ ++K GCSW+E R + FR D+SH R
Sbjct: 524 NTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEGFRVGDKSHPR 583
Query: 593 SEEI 596
EEI
Sbjct: 584 YEEI 587
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 183/344 (53%), Gaps = 8/344 (2%)
Query: 174 GNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFT 233
G++ AR++FD + + + WN++I GY N+ + +A M+ + + + P SFT
Sbjct: 67 GDITFARQVFDDLP----RPQVFPWNAIIRGYSRNNHFQDALLMYSKMQLAR-VSPDSFT 121
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
F +L AC ++ L+ G+ +HA LG ++D FV L+ +Y + + L A+ F+ +
Sbjct: 122 FPHLLKACGGLSHLQMGRFVHAQVFRLGFEADVFVQNGLIALYAKCRRLGCARTVFEGLP 181
Query: 294 NIENLLGKMKE--DGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG 351
E + + N A+++FS+M +D+ PD + +L+A + L +E+G
Sbjct: 182 LPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQG 241
Query: 352 KQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMH 411
+ +HA ++ G +++ + +L MYAKCG + A++ + ++ +P+L+ NAM++ YA +
Sbjct: 242 RSIHASVMKMGLETEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKN 301
Query: 412 GHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHY 471
G K+ I F ++ RPD IS SA+SAC GS++ + ++ D + +
Sbjct: 302 GFAKDAIDLFHEMINKDVRPDTISITSAISACAQVGSLEQARWMDEYVSRSDYRDDVFIS 361
Query: 472 TCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
+ ++D+ ++ G + A + + D V+W A++ G HG
Sbjct: 362 SALIDMFAKCGSVECARSVFDRT-LDRDVVVWSAMIVGYGLHGQ 404
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 154/322 (47%), Gaps = 32/322 (9%)
Query: 221 LLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQ 280
L GI SF + S++ + LR +IHA + LGLQ F+ L+ Y
Sbjct: 12 LYTNSGIHSDSF-YASLIDSSTHKAQLR---QIHARLLVLGLQFSGFLITKLIHASSSYG 67
Query: 281 DLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILS 340
D+ A+ FD++ + G+ N + +A+ ++S+M ++PD +T +L
Sbjct: 68 DITFARQVFDDLPRPQVFPWNAIIRGYSRNNHFQDALLMYSKMQLARVSPDSFTFPHLLK 127
Query: 341 ACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPD--L 398
AC L+ ++ G+ VHA R G+++DV + L+ +YAKC L AR ++ + P+ +
Sbjct: 128 ACGGLSHLQMGRFVHAQVFRLGFEADVFVQNGLIALYAKCRRLGCARTVFEGLPLPERTI 187
Query: 399 VSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSA-----------CVHAG 447
VS A+++AYA +G E + F ++ +PD ++ +S L+A +HA
Sbjct: 188 VSWTAIVSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSIHAS 247
Query: 448 SIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALL 507
+K G E +P L + + ++ G++ A K+ +P+ ++W A++
Sbjct: 248 VMKMGLE---------TEPDL--LISLNTMYAKCGQVATAKILFDKMK-SPNLILWNAMI 295
Query: 508 GGCVSHGNLEFGQIAADRLIEL 529
G +G F + A D E+
Sbjct: 296 SGYAKNG---FAKDAIDLFHEM 314
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 91/409 (22%), Positives = 165/409 (40%), Gaps = 109/409 (26%)
Query: 1 MYGKCGSLDDAKKVFK--MMPERDCVSWNSVVTACAANG--------------------- 37
+Y KC L A+ VF+ +PER VSW ++V+A A NG
Sbjct: 163 LYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMDVKPDC 222
Query: 38 ----LVLEALECLERMSS------------LDNE-------------------------- 55
VL A CL+ + L+ E
Sbjct: 223 VALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLISLNTMYAKCGQVATAKILFDK 282
Query: 56 --TPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLG 113
+PNL+ W+A+I G+ +NG+ ++AI + M + + P+ +++S + ACA++ L
Sbjct: 283 MKSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTISITSAISACAQVGSLEQA 342
Query: 114 KEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCEN 173
+ Y++R+ + + F+ + L+D++ +CG + A +F + ++ V + +IVGY +
Sbjct: 343 RWMDEYVSRSDYRDDVFISSALIDMFAKCGSVECARSVFDRTLDRDVVVWSAMIVGYGLH 402
Query: 174 GNVAEARELFDQMEHLGVQRGIISWNSMI-----SGYVDNSLY-------------DEAF 215
G EA L+ ME GV +++ ++ SG V + + +
Sbjct: 403 GQAREAISLYRAMERDGVHPNDVTFLGLLIACNHSGMVREGWWFFNRMADHKINPQQQHY 462
Query: 216 SMFRDLLMRDG-------------IEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGL 262
+ DLL R G ++P +G++L AC + GK
Sbjct: 463 ACIIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGK--------YAA 514
Query: 263 QSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNV 311
Q + + Y + +L AA +D + + +MKE G +V
Sbjct: 515 QQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRV---RMKEKGLNKDV 560
>gi|357115175|ref|XP_003559367.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Brachypodium distachyon]
Length = 849
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 201/598 (33%), Positives = 316/598 (52%), Gaps = 73/598 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC L++A ++F +MP D LV
Sbjct: 292 MYAKCQCLEEAWRLFGLMPRDD------------------------------------LV 315
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+ +I G QNG ++A+ + MQ GL+P++ TL+S+LPA L GKE HGYI
Sbjct: 316 TWNGMISGCVQNGLVDDALRLFCDMQKSGLQPDSVTLASLLPALTELNGFKQGKEIHGYI 375
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
RN + F+V+ LVD+Y +C D V A+
Sbjct: 376 VRNCAHVDVFLVSALVDIYFKCRD-------------------------------VRMAQ 404
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+FD + + V G ++MISGYV N + + A MFR LL GI+P + S L A
Sbjct: 405 NVFDATKSIDVVIG----STMISGYVLNRMSEAAVKMFRYLLAL-GIKPNAVMVASTLPA 459
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA M ++R G+E+H + + +V AL++MY + L + F ++ + +
Sbjct: 460 CASMAAMRIGQELHGYVLKNAYEGRCYVESALMDMYSKCGRLDLSHYMFSKMSAKDEVTW 519
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
F N A+ LF +M+ + + T+ ILSAC+ L + GK++H I+
Sbjct: 520 NSMISSFAQNGEPEEALDLFRQMIMEGVKYNNVTISSILSACAGLPAIYYGKEIHGIIIK 579
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
+D+ +AL+DMY KCG+L+ A ++ + + VS N++++AY HG KE +
Sbjct: 580 GPIRADLFAESALIDMYGKCGNLELALRVFEHMPEKNEVSWNSIISAYGAHGLVKESVDL 639
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLS 479
+ GF+ DH++FL+ +SAC HAG ++ G F M Y ++P ++H +CMVDL S
Sbjct: 640 LCCMQEEGFKADHVTFLALISACAHAGQVQEGLRLFRCMTEEYHIEPQVEHLSCMVDLYS 699
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
RAG+L +A +FI +P PD+ +WGALL C H N+E +IA+ L +L+P+N G YV+
Sbjct: 700 RAGKLDKAMQFIADMPFKPDAGIWGALLHACRVHRNVELAEIASQELFKLDPHNCGYYVL 759
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
++N+ A AGRW +++ R+ MKD+++ K PG SW++ + H F A+D++H SEEIY
Sbjct: 760 MSNINAVAGRWDGVSKMRRLMKDKKVQKIPGYSWVDVNNTSHLFVAADKNHPDSEEIY 817
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 139/515 (26%), Positives = 247/515 (47%), Gaps = 75/515 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY G LD A++VF M ERDCV WN
Sbjct: 191 MYADAGLLDGAREVFDGMDERDCVLWN--------------------------------- 217
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
++ G+ + G A+G+ M+A G +PN TL+ L CA L G + H
Sbjct: 218 ---VMMDGYVKAGDVASAVGLFRVMRASGCDPNFATLACFLSVCAAEADLLSGVQLH--- 271
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVS-CNTIIVGYCENGNVAEA 179
+ K+ ++ EV+ NT++ Y + + EA
Sbjct: 272 -----------------------------TLAVKYGLEPEVAVANTLVSMYAKCQCLEEA 302
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
LF M + +++WN MISG V N L D+A +F D+ + G++P S T S+L
Sbjct: 303 WRLFGLMP----RDDLVTWNGMISGCVQNGLVDDALRLFCDM-QKSGLQPDSVTLASLLP 357
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
A ++N ++GKEIH + D F+ ALV++Y + +D+ AQ FD ++I+ ++
Sbjct: 358 ALTELNGFKQGKEIHGYIVRNCAHVDVFLVSALVDIYFKCRDVRMAQNVFDATKSIDVVI 417
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
G G+ N + A+++F +L+L + P+ V L AC+S+A M G+++H Y +
Sbjct: 418 GSTMISGYVLNRMSEAAVKMFRYLLALGIKPNAVMVASTLPACASMAAMRIGQELHGYVL 477
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
+ Y+ ++ +AL+DMY+KCG L + + ++S D V+ N+M++++A +G +E +
Sbjct: 478 KNAYEGRCYVESALMDMYSKCGRLDLSHYMFSKMSAKDEVTWNSMISSFAQNGEPEEALD 537
Query: 420 HFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLS 479
FR+++ G + ++++ S LSAC +I G E ++ ++ L + ++D+
Sbjct: 538 LFRQMIMEGVKYNNVTISSILSACAGLPAIYYGKEIHGIIIKGPIRADLFAESALIDMYG 597
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
+ G L A + +P + V W +++ +HG
Sbjct: 598 KCGNLELALRVFEHMP-EKNEVSWNSIISAYGAHG 631
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 122/261 (46%), Gaps = 1/261 (0%)
Query: 196 ISWNSMISGYVDNSLYDEAFSMFRDLLMR-DGIEPTSFTFGSVLIACADMNSLRKGKEIH 254
+ WN +I G+ + A + + P T V+ +CA + +L G+ +H
Sbjct: 111 LPWNWLIRGFTMAGHHRLAVLFYVKMWAHPSSPRPDGHTLPYVVKSCAALGALHLGRLVH 170
Query: 255 ALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTW 314
ALGL D +VG AL++MY L A+ FD ++ + +L + DG+
Sbjct: 171 RTTRALGLDRDMYVGSALIKMYADAGLLDGAREVFDGMDERDCVLWNVMMDGYVKAGDVA 230
Query: 315 NAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALV 374
+A+ LF M + P+ T+ LS C++ A + G Q+H A++ G + +V + LV
Sbjct: 231 SAVGLFRVMRASGCDPNFATLACFLSVCAAEADLLSGVQLHTLAVKYGLEPEVAVANTLV 290
Query: 375 DMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHI 434
MYAKC L+ A + + DLV+ N M++ +G + + F + SG +PD +
Sbjct: 291 SMYAKCQCLEEAWRLFGLMPRDDLVTWNGMISGCVQNGLVDDALRLFCDMQKSGLQPDSV 350
Query: 435 SFLSALSACVHAGSIKTGSEF 455
+ S L A K G E
Sbjct: 351 TLASLLPALTELNGFKQGKEI 371
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 129/296 (43%), Gaps = 11/296 (3%)
Query: 229 PTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGA-----LVEMYC---RYQ 280
P ++ ++L C + L G IHA A+ GL G A LV MY R++
Sbjct: 34 PCAYRLLALLRGCVAPSHLPLGLRIHARAVTSGLLDAAGPGPAALQTRLVGMYVLARRFR 93
Query: 281 DLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTP--DIYTVGII 338
D VA + L GF + A+ + +M + +P D +T+ +
Sbjct: 94 DAVAVFSSLPRAAAAAALPWNWLIRGFTMAGHHRLAVLFYVKMWAHPSSPRPDGHTLPYV 153
Query: 339 LSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDL 398
+ +C++L + G+ VH G D D+++G+AL+ MYA G L AR + + D
Sbjct: 154 VKSCAALGALHLGRLVHRTTRALGLDRDMYVGSALIKMYADAGLLDGAREVFDGMDERDC 213
Query: 399 VSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDL 458
V N M+ Y G + FR + ASG P+ + LS C + +G + L
Sbjct: 214 VLWNVMMDGYVKAGDVASAVGLFRVMRASGCDPNFATLACFLSVCAAEADLLSGVQLHTL 273
Query: 459 MAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
Y ++P + +V + ++ L EA+ +P D V W ++ GCV +G
Sbjct: 274 AVKYGLEPEVAVANTLVSMYAKCQCLEEAWRLFGLMP-RDDLVTWNGMISGCVQNG 328
>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 877
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 203/589 (34%), Positives = 321/589 (54%), Gaps = 42/589 (7%)
Query: 14 VFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNG 73
V +M E+D + N++V G V A E+M D +VSW+A+I G NG
Sbjct: 228 VVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSD-----VVSWNALISGCVLNG 282
Query: 74 YDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVN 133
+D AI +L +M++ GL PN LSS+L ACA LG++ HG++ + S+ ++
Sbjct: 283 HDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGV 342
Query: 134 GLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQR 193
GLVD+Y + N + +A ++FD M H R
Sbjct: 343 GLVDMYAK-------------------------------NHFLDDAMKVFDWMSH----R 367
Query: 194 GIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEI 253
+I WN++ISG +DEAFS+F L ++G+ T +VL + A + + +++
Sbjct: 368 DLILWNALISGCSHGGRHDEAFSIFYGL-RKEGLGVNRTTLAAVLKSTASLEAASATRQV 426
Query: 254 HALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYT 313
HALA +G D V L++ Y + L A F+E + + + +
Sbjct: 427 HALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHG 486
Query: 314 WNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTAL 373
A++LF EML L PD + + +L+AC+SL+ E+GKQVHA+ I+ + SD G AL
Sbjct: 487 EGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNAL 546
Query: 374 VDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDH 433
V YAKCGS++ A LA+ + +VS +AM+ A HGHGK + F R++ G P+H
Sbjct: 547 VYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNH 606
Query: 434 ISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIK 492
I+ S L AC HAG + +F+ M + + + +HY+CM+DLL RAG+L +A E +
Sbjct: 607 ITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVN 666
Query: 493 KIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSD 552
+P ++ +WGALLG H + E G++AA++L LEP +G +V+LAN +A +G W++
Sbjct: 667 SMPFQANASVWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASSGMWNE 726
Query: 553 LARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
+A+ R+ MKD + K P SW+E +D++H F D+SH ++EIY+ +D
Sbjct: 727 VAKVRKLMKDSNIKKEPAMSWVEVKDKVHTFIVGDKSHPMTKEIYSKLD 775
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 109/386 (28%), Positives = 180/386 (46%), Gaps = 38/386 (9%)
Query: 57 PNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEF 116
P VSWS+++ ++ NG AI M+AEG+ N L VL Q LG +
Sbjct: 66 PCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDAQ---LGAQV 122
Query: 117 HGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNV 176
H GF S+ FV N LV +Y G M
Sbjct: 123 HAMAMATGFGSDVFVANALVAMYGGFGFM------------------------------- 151
Query: 177 AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGS 236
+AR +FD+ G +R +SWN ++S YV N +A +F +++ GI+PT F F
Sbjct: 152 DDARRVFDEA---GSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVW-SGIQPTEFGFSC 207
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
V+ AC ++ G+++HA+ + +G + D F ALV+MY + + A + F+++ + +
Sbjct: 208 VVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSD 267
Query: 297 NLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHA 356
+ G N + A++L +M S L P+++ + IL AC+ + G+Q+H
Sbjct: 268 VVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHG 327
Query: 357 YAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKE 416
+ I+ DSD +IG LVDMYAK L A + +S DL+ NA+++ + G E
Sbjct: 328 FMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDE 387
Query: 417 GIAHFRRILASGFRPDHISFLSALSA 442
+ F + G + + + L +
Sbjct: 388 AFSIFYGLRKEGLGVNRTTLAAVLKS 413
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 115/425 (27%), Positives = 193/425 (45%), Gaps = 48/425 (11%)
Query: 93 NARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIF 152
+A T+S L A Q L G H + ++GF+++ + N L+ Y +C
Sbjct: 3 SAGTISQQLTRYAAAQALLPGAHLHANLLKSGFLAS--LRNHLISFYSKC---------- 50
Query: 153 SKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYD 212
C AR +FD++ +SW+S+++ Y +N L
Sbjct: 51 ------RRPCC---------------ARRVFDEIP----DPCHVSWSSLVTAYSNNGLPR 85
Query: 213 EAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGAL 272
A F + +G+ F VL D + G ++HA+A+A G SD FV AL
Sbjct: 86 SAIQAFHGM-RAEGVCCNEFALPVVLKCVPDA---QLGAQVHAMAMATGFGSDVFVANAL 141
Query: 273 VEMYCRYQDLVAAQMAFDEIENIENLL---GKMKEDGFEPNVYTWNAMQLFSEMLSLDLT 329
V MY + + A+ FDE + N + G M + N +A+Q+F EM+ +
Sbjct: 142 VAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMS--AYVKNDQCGDAIQVFGEMVWSGIQ 199
Query: 330 PDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLA 389
P + +++AC+ ++ G+QVHA +R GY+ DV ALVDMY K G + A +
Sbjct: 200 PTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVI 259
Query: 390 YKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSI 449
++++ D+VS NA+++ ++GH I ++ +SG P+ S L AC AG+
Sbjct: 260 FEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAF 319
Query: 450 KTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
G + M + +VD+ ++ L +A + + D ++W AL+ G
Sbjct: 320 DLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHR-DLILWNALISG 378
Query: 510 CVSHG 514
C SHG
Sbjct: 379 C-SHG 382
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 108/452 (23%), Positives = 183/452 (40%), Gaps = 102/452 (22%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G +D A +F+ MP+ D VSWN++++ C NG
Sbjct: 246 MYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNG----------------------- 282
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+D AI +L +M++ GL PN LSS+L ACA LG++ HG++
Sbjct: 283 -------------HDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFM 329
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ S+ ++ GLVD+Y + + A+K+F S ++ + N +I G G EA
Sbjct: 330 IKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAF 389
Query: 181 ELFDQM--EHLGVQRGIISW---------------------------------NSMISGY 205
+F + E LGV R ++ N +I Y
Sbjct: 390 SIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSY 449
Query: 206 VDNSLYDEAFSMFRDL------------------------------LMRDGIEPTSFTFG 235
S +A +F + ++R G+EP F
Sbjct: 450 WKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLS 509
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
S+L ACA +++ +GK++HA I SD F G ALV Y + + A++AF +
Sbjct: 510 SLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPER 569
Query: 296 ENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ-V 354
+ G + + A++LF M+ + P+ T+ +L AC+ ++ K+
Sbjct: 570 GVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYF 629
Query: 355 HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHA 386
++ G D + ++D+ + G L A
Sbjct: 630 NSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDA 661
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 127/284 (44%), Gaps = 7/284 (2%)
Query: 233 TFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI 292
T L A +L G +HA + G + + L+ Y + + A+ FDEI
Sbjct: 6 TISQQLTRYAAAQALLPGAHLHANLLKSGFLAS--LRNHLISFYSKCRRPCCARRVFDEI 63
Query: 293 ENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGK 352
+ ++ + N +A+Q F M + + + + + ++L + + G
Sbjct: 64 PDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKC---VPDAQLGA 120
Query: 353 QVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRI-STPDLVSQNAMLTAYAMH 411
QVHA A+ G+ SDV + ALV MY G + AR + S + VS N +++AY +
Sbjct: 121 QVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKN 180
Query: 412 GHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHY 471
+ I F ++ SG +P F ++AC + +I G + ++ + +
Sbjct: 181 DQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTA 240
Query: 472 TCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
+VD+ + G + A +K+P + D V W AL+ GCV +G+
Sbjct: 241 NALVDMYVKMGRVDIASVIFEKMPDS-DVVSWNALISGCVLNGH 283
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 130/315 (41%), Gaps = 35/315 (11%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y KCGS++DA+ F +PER VSW++++ A +G ALE RM + PN ++
Sbjct: 550 YAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVD-EGINPNHIT 608
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
++V+ G +EA M+ G++ S ++ R KL E +
Sbjct: 609 MTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMEL---V 665
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDM-LSALKIFSKFSIKNEVSCNTIIVG--YCENGNVA 177
F +N V L+ R D L L F ++ E S +++ Y +G
Sbjct: 666 NSMPFQANASVWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASSGMWN 725
Query: 178 EARELFDQMEHLGVQR-GIISW-------NSMISGYVDNSLYDEAFSMFR---DLLMRDG 226
E ++ M+ +++ +SW ++ I G + + E +S DL+ + G
Sbjct: 726 EVAKVRKLMKDSNIKKEPAMSWVEVKDKVHTFIVGDKSHPMTKEIYSKLDELGDLMSKAG 785
Query: 227 IEPTSFTFGSVLIACADMNSLRKGKEI------HALAIALGLQSDTFVGGALVEMYCRYQ 280
P +V + D++ R KE+ LA+A L S GA + + +
Sbjct: 786 YIP------NVDVDLHDLD--RSEKELLLSHHSERLAVAFALLSTP--PGAPIRVKKNLR 835
Query: 281 DLVAAQMAFDEIENI 295
MAF I NI
Sbjct: 836 ICRDCHMAFKFISNI 850
>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g30700-like [Cucumis sativus]
Length = 788
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 208/602 (34%), Positives = 314/602 (52%), Gaps = 74/602 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y K + A+KVF +MPERD V WN++
Sbjct: 157 LYFKFTRAELARKVFDVMPERDTVLWNTM------------------------------- 185
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
I GF++N Y E++I + M GL ++ TL++VL A A LQ+ LG
Sbjct: 186 -----ISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLA 240
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
++ G S+ +V+ GL+ +Y +CG SC + R
Sbjct: 241 SKKGLHSDVYVLTGLISLYSKCGK-----------------SC--------------KGR 269
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LFDQ++ Q +IS+N+MISGY N + A ++FR+LL G S T ++
Sbjct: 270 ILFDQID----QPDLISYNAMISGYTFNHETESAVTLFRELLA-SGQRVNSSTLVGLIPV 324
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
N L+ + I L++ +G+ V AL +YCR ++ A+ FDE
Sbjct: 325 YLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASW 384
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G+ N T A+ LF EM+ L+P+ TV ILSAC+ L + GK VH
Sbjct: 385 NAMISGYTQNGLTDRAISLFQEMMP-QLSPNPVTVTSILSACAQLGALSIGKWVHGLIKS 443
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
+S+V++ TALVDMYAKCGS+ AR + + ++V+ NAM+T Y +HGHGKE +
Sbjct: 444 ERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKL 503
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLS 479
F +L SG P ++FLS L AC H+G + G+E F MA Y +P +HY CMVD+L
Sbjct: 504 FYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILG 563
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
RAG+L A EFI+++P+ P +WGALLG C+ H N E +A+ RL +L+P N G YV+
Sbjct: 564 RAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVL 623
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTI 599
L+N+++ + A RQ +K R++ K+PGC+ IE D+ + F + DRSH ++ I+ +
Sbjct: 624 LSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEM 683
Query: 600 ID 601
++
Sbjct: 684 LE 685
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 108/418 (25%), Positives = 192/418 (45%), Gaps = 39/418 (9%)
Query: 174 GNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFT 233
G VA R+LF+++ + + +N +I G+ DN L + ++ L + P +FT
Sbjct: 60 GAVAHVRQLFNKVS----KPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKXTNLRPDNFT 115
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
+ + A + + R G +HA +I G+ S+ FVG A+V++Y ++ A+ FD +
Sbjct: 116 YAFAISAASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMP 175
Query: 294 NIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ 353
+ +L GF N Y +++++F +ML + L+ D T+ +L+A + L G
Sbjct: 176 ERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMG 235
Query: 354 VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGH 413
+ A + G SDV++ T L+ +Y+KCG R+ + +I PDL+S NAM++ Y +
Sbjct: 236 IQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHE 295
Query: 414 GKEGIAHFRRILASGFR----------PDHISFLS-ALSACVHAGSIKTG---------- 452
+ + FR +LASG R P ++ F LS + S+K G
Sbjct: 296 TESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTA 355
Query: 453 --------SEFFDLMAYYDVKP--SLKHYTCMVDLLSRAGELGEAYEFIKKI--PMAPDS 500
+E +D P SL + M+ ++ G A +++ ++P+
Sbjct: 356 LTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQLSPNP 415
Query: 501 VMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQ 558
V ++L C G L G+ LI+ E + YV A + YA + + RQ
Sbjct: 416 VTVTSILSACAQLGALSIGKWVHG-LIKSERLESNVYVSTALVDMYA-KCGSIVEARQ 471
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 105/460 (22%), Positives = 203/460 (44%), Gaps = 39/460 (8%)
Query: 57 PNLVSWSAVIGGFTQNGYDEEAIGMLFRM-QAEGLEPNARTLSSVLPACARLQKLSLGKE 115
P+L ++ +I GF+ NG + +I + + + L P+ T + + A +RL+ +G
Sbjct: 75 PDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKXTNLRPDNFTYAFAISAASRLEDERVGVL 134
Query: 116 FHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGN 175
H + +G SN FV + +VD+Y + A K+F ++ V NT+I G+
Sbjct: 135 LHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSR--- 191
Query: 176 VAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFG 235
NS ++++ +F D+L G+ S T
Sbjct: 192 --------------------------------NSYFEDSIRVFVDML-DVGLSFDSTTLA 218
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
+VL A A++ R G I LA GL SD +V L+ +Y + ++ FD+I+
Sbjct: 219 TVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQP 278
Query: 296 ENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVH 355
+ + G+ N T +A+ LF E+L+ + T+ ++ ++ + +
Sbjct: 279 DLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQ 338
Query: 356 AYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGK 415
+++ G + TAL +Y + ++ AR + L S NAM++ Y +G
Sbjct: 339 NLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTD 398
Query: 416 EGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMV 475
I+ F+ ++ P+ ++ S LSAC G++ G L+ ++ ++ T +V
Sbjct: 399 RAISLFQEMMPQ-LSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALV 457
Query: 476 DLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
D+ ++ G + EA + + + + V W A++ G HG+
Sbjct: 458 DMYAKCGSIVEARQLF-DLMVDKNVVTWNAMITGYGLHGH 496
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 75/174 (43%), Gaps = 6/174 (3%)
Query: 339 LSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDL 398
L+ ++ T+ + Q+ A I G D+ T L + G++ H R + ++S PDL
Sbjct: 18 LTLLNNATTLSQLLQIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDL 77
Query: 399 VSQNAMLTAYAMHGHGKEGI---AHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEF 455
N ++ ++ +G K I H R+ + RPD+ ++ A+SA + G
Sbjct: 78 FLFNVLIRGFSDNGLPKSSIFLYTHLRK--XTNLRPDNFTYAFAISAASRLEDERVGVLL 135
Query: 456 FDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
V +L + +VDL + A + +P D+V+W ++ G
Sbjct: 136 HAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMP-ERDTVLWNTMISG 188
>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
Length = 691
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 194/552 (35%), Positives = 304/552 (55%), Gaps = 11/552 (1%)
Query: 55 ETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGK 114
+ PNL+ W+ ++ G + + M RM + G PNA T +L +CA+ + G+
Sbjct: 44 QEPNLLIWNTMLRGLASSSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEGR 103
Query: 115 EFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
+ H + + G + + L+ +Y R G + A K+F S ++ VSC +I GY G
Sbjct: 104 QIHAQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRG 163
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTF 234
+V AR++FD + +R ++SWN+MI+GYV+N Y+EA +F+++ MR + P T
Sbjct: 164 DVRSARKVFDXI----TERDVVSWNAMITGYVENCGYEEALELFKEM-MRTNVRPDEGTL 218
Query: 235 GSVLIACADMNSLRKGKEIHALAI-ALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
SVL ACA S+ G+EIH L G S + A + +Y + D+ A F+ +
Sbjct: 219 VSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLS 278
Query: 294 NIENLLGKMKEDGF-EPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGK 352
+ + G+ N+Y A+ LF EML +P+ T+ +L AC+ L ++ G+
Sbjct: 279 CKDVVSWNTLIGGYTHMNLYK-EALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGR 337
Query: 353 QVHAYAIR--CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAM 410
+H Y + G + + T+L+DMYAKCG ++ A + + L S NAM+ +AM
Sbjct: 338 WIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAM 397
Query: 411 HGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLK 469
HG F R+ +G PD I+ + LSAC H+G + G F + Y++ P L+
Sbjct: 398 HGRANAAFDLFSRMRKNGIEPDDITLVGLLSACSHSGLLDLGRHIFKSVTQDYNITPKLE 457
Query: 470 HYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIEL 529
HY CM+DLL AG EA E I +PM PD V+W +LL C HGNLE + A +L+E+
Sbjct: 458 HYGCMIDLLGHAGLFKEAEEIIHMMPMEPDGVIWCSLLKACKMHGNLELAESFAQKLMEI 517
Query: 530 EPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRS 589
EP N+G+YV+L+N++A AGRW D+AR R+ + + M K PGCS IE +H+F D+
Sbjct: 518 EPENSGSYVLLSNIYATAGRWEDVARIREVLNGKGMKKVPGCSSIEIDSVVHEFIIGDKL 577
Query: 590 HDRSEEIYTIID 601
H +S EIY +++
Sbjct: 578 HPQSREIYRMLE 589
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 123/436 (28%), Positives = 200/436 (45%), Gaps = 82/436 (18%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY + G L+DA+KVF +RD VS +++T A+ G V A + + ++ D +V
Sbjct: 127 MYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSARKVFDXITERD-----VV 181
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A+I G+ +N EEA+ + M + P+ TL SVL ACA+ + LG+E H +
Sbjct: 182 SWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGREIHTLV 241
Query: 121 -TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+GF S+ +VN + +Y +CGD+ A +F S K+ VS NT+I GY
Sbjct: 242 DDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYT-------- 293
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
H+ +LY EA +F+++L R G P T SVL
Sbjct: 294 --------HM-------------------NLYKEALLLFQEML-RSGESPNDVTMLSVLP 325
Query: 240 ACADMNSLRKGKEIHALAIAL--GLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
ACA + ++ G+ IH G+ + + + +L++MY + D+ AA F+ +
Sbjct: 326 ACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSM----- 380
Query: 298 LLGKMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACS 343
++ +WNAM LFS M + PD T+ +LSACS
Sbjct: 381 ---------MHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPDDITLVGLLSACS 431
Query: 344 SLATMERGKQVHAYAIRCGYDSDV-----HIGTALVDMYAKCGSLKHA-RLAYKRISTPD 397
++ G+ + + D ++ H G ++D+ G K A + + PD
Sbjct: 432 HSGLLDLGRHIFKSVTQ---DYNITPKLEHYG-CMIDLLGHAGLFKEAEEIIHMMPMEPD 487
Query: 398 LVSQNAMLTAYAMHGH 413
V ++L A MHG+
Sbjct: 488 GVIWCSLLKACKMHGN 503
>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Cucumis sativus]
Length = 788
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 208/602 (34%), Positives = 314/602 (52%), Gaps = 74/602 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y K + A+KVF +MPERD V WN++
Sbjct: 157 LYFKFTRAELARKVFDVMPERDTVLWNTM------------------------------- 185
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
I GF++N Y E++I + M GL ++ TL++VL A A LQ+ LG
Sbjct: 186 -----ISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLA 240
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
++ G S+ +V+ GL+ +Y +CG SC + R
Sbjct: 241 SKKGLHSDVYVLTGLISLYSKCGK-----------------SC--------------KGR 269
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LFDQ++ Q +IS+N+MISGY N + A ++FR+LL G S T ++
Sbjct: 270 ILFDQID----QPDLISYNAMISGYTFNHETESAVTLFRELLA-SGQRVNSSTLVGLIPV 324
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
N L+ + I L++ +G+ V AL +YCR ++ A+ FDE
Sbjct: 325 YLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASW 384
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G+ N T A+ LF EM+ L+P+ TV ILSAC+ L + GK VH
Sbjct: 385 NAMISGYTQNGLTDRAISLFQEMMP-QLSPNPVTVTSILSACAQLGALSIGKWVHGLIKS 443
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
+S+V++ TALVDMYAKCGS+ AR + + ++V+ NAM+T Y +HGHGKE +
Sbjct: 444 ERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKL 503
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLS 479
F +L SG P ++FLS L AC H+G + G+E F MA Y +P +HY CMVD+L
Sbjct: 504 FYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILG 563
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
RAG+L A EFI+++P+ P +WGALLG C+ H N E +A+ RL +L+P N G YV+
Sbjct: 564 RAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVL 623
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTI 599
L+N+++ + A RQ +K R++ K+PGC+ IE D+ + F + DRSH ++ I+ +
Sbjct: 624 LSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEM 683
Query: 600 ID 601
++
Sbjct: 684 LE 685
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 108/418 (25%), Positives = 193/418 (46%), Gaps = 39/418 (9%)
Query: 174 GNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFT 233
G VA R+LF+++ + + +N +I G+ DN L + ++ L + + P +FT
Sbjct: 60 GAVAHVRQLFNKVS----KPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKKTNLRPDNFT 115
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
+ + A + + R G +HA +I G+ S+ FVG A+V++Y ++ A+ FD +
Sbjct: 116 YAFAISAASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMP 175
Query: 294 NIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ 353
+ +L GF N Y +++++F +ML + L+ D T+ +L+A + L G
Sbjct: 176 ERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMG 235
Query: 354 VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGH 413
+ A + G SDV++ T L+ +Y+KCG R+ + +I PDL+S NAM++ Y +
Sbjct: 236 IQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHE 295
Query: 414 GKEGIAHFRRILASGFR----------PDHISFLS-ALSACVHAGSIKTG---------- 452
+ + FR +LASG R P ++ F LS + S+K G
Sbjct: 296 TESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTA 355
Query: 453 --------SEFFDLMAYYDVKP--SLKHYTCMVDLLSRAGELGEAYEFIKKI--PMAPDS 500
+E +D P SL + M+ ++ G A +++ ++P+
Sbjct: 356 LTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQLSPNP 415
Query: 501 VMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQ 558
V ++L C G L G+ LI+ E + YV A + YA + + RQ
Sbjct: 416 VTVTSILSACAQLGALSIGKWVHG-LIKSERLESNVYVSTALVDMYA-KCGSIVEARQ 471
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 105/460 (22%), Positives = 204/460 (44%), Gaps = 39/460 (8%)
Query: 57 PNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKE 115
P+L ++ +I GF+ NG + +I + ++ + L P+ T + + A +RL+ +G
Sbjct: 75 PDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKKTNLRPDNFTYAFAISAASRLEDERVGVL 134
Query: 116 FHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGN 175
H + +G SN FV + +VD+Y + A K+F ++ V NT+I G+
Sbjct: 135 LHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSR--- 191
Query: 176 VAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFG 235
NS ++++ +F D+L G+ S T
Sbjct: 192 --------------------------------NSYFEDSIRVFVDML-DVGLSFDSTTLA 218
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
+VL A A++ R G I LA GL SD +V L+ +Y + ++ FD+I+
Sbjct: 219 TVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQP 278
Query: 296 ENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVH 355
+ + G+ N T +A+ LF E+L+ + T+ ++ ++ + +
Sbjct: 279 DLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQ 338
Query: 356 AYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGK 415
+++ G + TAL +Y + ++ AR + L S NAM++ Y +G
Sbjct: 339 NLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTD 398
Query: 416 EGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMV 475
I+ F+ ++ P+ ++ S LSAC G++ G L+ ++ ++ T +V
Sbjct: 399 RAISLFQEMMPQ-LSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALV 457
Query: 476 DLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
D+ ++ G + EA + + + + V W A++ G HG+
Sbjct: 458 DMYAKCGSIVEARQLF-DLMVDKNVVTWNAMITGYGLHGH 496
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 75/174 (43%), Gaps = 6/174 (3%)
Query: 339 LSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDL 398
L+ ++ T+ + Q+ A I G D+ T L + G++ H R + ++S PDL
Sbjct: 18 LTLLNNATTLSQLLQIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDL 77
Query: 399 VSQNAMLTAYAMHGHGKEGI---AHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEF 455
N ++ ++ +G K I H R+ + RPD+ ++ A+SA + G
Sbjct: 78 FLFNVLIRGFSDNGLPKSSIFLYTHLRK--KTNLRPDNFTYAFAISAASRLEDERVGVLL 135
Query: 456 FDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
V +L + +VDL + A + +P D+V+W ++ G
Sbjct: 136 HAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMP-ERDTVLWNTMISG 188
>gi|449438685|ref|XP_004137118.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
gi|449528041|ref|XP_004171015.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
Length = 868
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 207/667 (31%), Positives = 327/667 (49%), Gaps = 102/667 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC SL+D+ VF +P++ N +
Sbjct: 201 MYAKCNSLEDSLDVFSELPDK------------------------------------NWI 224
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SWSA I G QN + + MQ +G+ + T +SV +CA L LG + H +
Sbjct: 225 SWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYASVFRSCAGLSASRLGTQLHCHA 284
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ F S+ V +D+Y +C +M A K+FS N S N +I+GY N +A
Sbjct: 285 LKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAF 344
Query: 181 ELFDQMEHLGVQ------RGIISWNSMISGY--------------------VDNSLYD-- 212
+LF Q++ G +S ++I G+ V N++ D
Sbjct: 345 KLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANAILDMY 404
Query: 213 -------EAFSMFRDLLMRDGI------------------------------EPTSFTFG 235
EA +F ++ +RD + EP FT+G
Sbjct: 405 GKCGALVEASGLFDEMEIRDPVSWNAIITACEQNESEGKTLSHFGAMLRSKMEPDEFTYG 464
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
SVL ACA + G E+H I G+ FVG ALV+MY + + A+ +E
Sbjct: 465 SVLKACAGQRAFSNGMEVHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLEEQ 524
Query: 296 ENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVH 355
+ GF + ++ + FS ML + + PD +T +L C++LAT+ GKQ+H
Sbjct: 525 TMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIH 584
Query: 356 AYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGK 415
A I+ SDV+I + LVDMY+KCG++ + L +++ D V+ NAM+ +A HG G+
Sbjct: 585 AQMIKLELLSDVYITSTLVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICGFAYHGLGE 644
Query: 416 EGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCM 474
E + F +L +P+H +F+S L AC H G+ K G +F MA Y ++P L+HY+CM
Sbjct: 645 EALELFEHMLHENIKPNHATFVSVLRACSHVGNAKKGLFYFQKMASIYALEPQLEHYSCM 704
Query: 475 VDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNT 534
VD+L R+G++ EA I+ +P D+++W LL C GN+E + AA L++L+P ++
Sbjct: 705 VDILGRSGQVEEALRLIQDMPFEADAIIWRTLLSICKIQGNVEVAEKAASSLLKLDPEDS 764
Query: 535 GNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSE 594
Y +L+N++A AG W +++ RQ M+ + K PGCSWIE +DE+H F D++H + E
Sbjct: 765 SAYTLLSNIYADAGMWQQVSKIRQTMRSHNLKKEPGCSWIEVKDEVHTFLVCDKAHPKCE 824
Query: 595 EIYTIID 601
IY+++D
Sbjct: 825 MIYSLLD 831
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 144/540 (26%), Positives = 253/540 (46%), Gaps = 53/540 (9%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETP--- 57
MY KC +L+ A KVF+ MP+RD VSWN++V CA G +E ++ N P
Sbjct: 68 MYVKCCALEYAYKVFEEMPQRDIVSWNTMVFGCAGAGR-------MELAQAVFNSMPHHG 120
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
++VSW+++I G+ QNG +++I + +M+ G+ + TL+ L C+ L+ LG + H
Sbjct: 121 DVVSWNSLISGYLQNGDIQKSIAVFLKMRDLGVMFDHTTLAVSLKICSLLEDQVLGIQIH 180
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
G + GF + + LVD+Y +C + +L +FS+ KN +S + I G +N +
Sbjct: 181 GIAVQMGFDYDVVTGSALVDMYAKCNSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLL 240
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
+LF +M+ R GI + T+ SV
Sbjct: 241 RGLKLFKEMQ------------------------------------RKGIGVSQSTYASV 264
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI--ENI 295
+CA +++ R G ++H A+ SD VG A ++MY + ++ A F + N+
Sbjct: 265 FRSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDHNL 324
Query: 296 ENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVH 355
++ + G+ N + A +LF ++ + D ++ LSA + + G Q+H
Sbjct: 325 QSYNAMII--GYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQLH 382
Query: 356 AYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGK 415
AI+ S++ + A++DMY KCG+L A + + D VS NA++TA +
Sbjct: 383 GLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQNESEG 442
Query: 416 EGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMV 475
+ ++HF +L S PD ++ S L AC + G E + + + + +V
Sbjct: 443 KTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRIIKSGMGLKMFVGSALV 502
Query: 476 DLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIEL--EPNN 533
D+ S+ G + EA + ++ V W A++ G E Q ++E+ EP+N
Sbjct: 503 DMYSKCGMMEEAEKIHYRLE-EQTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPDN 561
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 124/421 (29%), Positives = 203/421 (48%), Gaps = 15/421 (3%)
Query: 95 RTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSK 154
+T S + C+ + L GKE H ++ +GF FV N L+ +Y +C + A K+F +
Sbjct: 25 KTFSHIFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEE 84
Query: 155 FSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEA 214
++ VS NT++ G G + A+ +F+ M H G ++SWNS+ISGY+ N ++
Sbjct: 85 MPQRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHG---DVVSWNSLISGYLQNGDIQKS 141
Query: 215 FSMFRDLLMRD-GIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALV 273
++F L MRD G+ T L C+ + G +IH +A+ +G D G ALV
Sbjct: 142 IAVF--LKMRDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALV 199
Query: 274 EMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIY 333
+MY + L + F E+ + + G N ++LF EM +
Sbjct: 200 DMYAKCNSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQS 259
Query: 334 TVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRI 393
T + +C+ L+ G Q+H +A++ + SDV +GTA +DMYAKC ++ A + +
Sbjct: 260 TYASVFRSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLL 319
Query: 394 STPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGS 453
+L S NAM+ YA + G + F ++ + F D +S ALSA A IK S
Sbjct: 320 PDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSA---AAVIKGHS 376
Query: 454 EFFDLMAYYDVKPSLKHYTC----MVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
E L +K +L C ++D+ + G L EA ++ + D V W A++
Sbjct: 377 EGLQLHG-LAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEMEIR-DPVSWNAIITA 434
Query: 510 C 510
C
Sbjct: 435 C 435
>gi|297810061|ref|XP_002872914.1| hypothetical protein ARALYDRAFT_327675 [Arabidopsis lyrata subsp.
lyrata]
gi|297318751|gb|EFH49173.1| hypothetical protein ARALYDRAFT_327675 [Arabidopsis lyrata subsp.
lyrata]
Length = 1305
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 211/667 (31%), Positives = 336/667 (50%), Gaps = 108/667 (16%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
YG+C SLD A K+F MP+RD ++WN +V NL
Sbjct: 570 YGRCVSLDLANKIFDEMPKRDDLAWNEIVMV-------------------------NL-- 602
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
Q+G E+A+ + M+ G + T+ +L C+ + + G++ HGY+
Sbjct: 603 ---------QSGNWEKAVKLFRVMRFSGAKAYDSTMVKLLQVCSNKEGFAQGRQIHGYVL 653
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
R GF SN + N L+ +Y R G + S+ K+F+ +N S N+I+ Y G V +A
Sbjct: 654 RLGFESNVSMCNSLIVMYSRNGKLESSRKVFNSMVDRNLSSWNSIVSSYTRLGYVDDAMG 713
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
L D+ME G++ I++WNS++SGY +L +A ++ + + + G++P + + S+L A
Sbjct: 714 LLDEMETCGLKPDIVTWNSLLSGYASKALSRDAIAVLKRIQI-AGLKPNTSSISSLLQAV 772
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE--NI---- 295
+ ++ GK IH I L D +V L++MY + L A+M FD ++ NI
Sbjct: 773 YEPGLVKLGKAIHGYVIRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDEKNIVAWN 832
Query: 296 ---------------ENLLGKM-----------------------------------KED 305
E L+ +M K++
Sbjct: 833 SLISGLSYTGLLKEAEALISRMEKEGIKSNAVTWNSLVSGYATWGKTEKALAVVGKMKKN 892
Query: 306 GFEPNVYTW--------------NAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG 351
G EPNV +W N +++F +M ++P+ T+ +L L+ + G
Sbjct: 893 GVEPNVVSWTAILSGCSKNGNFGNGLKIFLKMQEEGVSPNSATISSLLRILGCLSLLYSG 952
Query: 352 KQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMH 411
K+VH++ ++ D H+ TALVDMYAK G L+ A + I L S N M+ YAM
Sbjct: 953 KEVHSFCLKNNLTRDAHVATALVDMYAKSGDLQSAAEIFWGIKNKPLASWNCMIMGYAMF 1012
Query: 412 GHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKH 470
G+EGIA F +L +G PD I+F S LS C ++G ++ G ++FDLM ++Y V P+++H
Sbjct: 1013 RRGEEGIAVFNAMLEAGIEPDAITFTSVLSVCKNSGLVREGWKYFDLMRSHYGVIPTIEH 1072
Query: 471 YTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELE 530
+CMV+LL R+G L EA++FI+ +P+ PD+ +WGA L C H +LE +IA RL LE
Sbjct: 1073 CSCMVELLGRSGYLDEAWDFIRTMPLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLE 1132
Query: 531 PNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSH 590
P+N+ NY+M+ NL++ RW D+ R R M + R+ SWI+ +H F A ++H
Sbjct: 1133 PHNSANYMMMINLYSNLNRWGDVERIRNSMSNNRVRVQDLWSWIQIDQTVHIFYAEGKAH 1192
Query: 591 DRSEEIY 597
EIY
Sbjct: 1193 PDEGEIY 1199
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 120/462 (25%), Positives = 211/462 (45%), Gaps = 67/462 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY + G L+ ++KVF M +R+ SWNS+V++ G V +A+ L+ M + + P++V
Sbjct: 670 MYSRNGKLESSRKVFNSMVDRNLSSWNSIVSSYTRLGYVDDAMGLLDEMETCGLK-PDIV 728
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W++++ G+ +AI +L R+Q GL+PN ++SS+L A + LGK HGY+
Sbjct: 729 TWNSLLSGYASKALSRDAIAVLKRIQIAGLKPNTSSISSLLQAVYEPGLVKLGKAIHGYV 788
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
RN + +V L+D+Y + G + A +F KN V+ N++I G G + EA
Sbjct: 789 IRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDEKNIVAWNSLISGLSYTGLLKEAE 848
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
L +ME G++ ++WNS++SGY ++A ++ + ++G+EP ++ ++L
Sbjct: 849 ALISRMEKEGIKSNAVTWNSLVSGYATWGKTEKALAVVGK-MKKNGVEPNVVSWTAILSG 907
Query: 241 CAD-----------------------------------MNSLRKGKEIHALAIALGLQSD 265
C+ ++ L GKE+H+ + L D
Sbjct: 908 CSKNGNFGNGLKIFLKMQEEGVSPNSATISSLLRILGCLSLLYSGKEVHSFCLKNNLTRD 967
Query: 266 TFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAM-------- 317
V ALV+MY + DL +A F I+N +P + +WN M
Sbjct: 968 AHVATALVDMYAKSGDLQSAAEIFWGIKN-------------KP-LASWNCMIMGYAMFR 1013
Query: 318 ------QLFSEMLSLDLTPDIYTVGIILSACSSLATMERG-KQVHAYAIRCGYDSDVHIG 370
+F+ ML + PD T +LS C + + G K G +
Sbjct: 1014 RGEEGIAVFNAMLEAGIEPDAITFTSVLSVCKNSGLVREGWKYFDLMRSHYGVIPTIEHC 1073
Query: 371 TALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNAMLTAYAMH 411
+ +V++ + G L A + + PD A L++ +H
Sbjct: 1074 SCMVELLGRSGYLDEAWDFIRTMPLKPDATIWGAFLSSCKIH 1115
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 115/497 (23%), Positives = 215/497 (43%), Gaps = 78/497 (15%)
Query: 58 NLVSWSAVIGGFTQNGYDE-EAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEF 116
N VSW + G ++ + + R+Q +G+ + L+ V CA L LG
Sbjct: 487 NQVSWRDFLEKAEDFGVEKYKVLEEFVRLQNKGVNFDEVVLAMVFRICAVLMYRFLGFTI 546
Query: 117 HGYITRNGF-MSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGN 175
HG + + G S+ VV+ L+ Y RC + A KIF + +++++ N I++ ++GN
Sbjct: 547 HGGLIKRGLDNSDTRVVSALMGFYGRCVSLDLANKIFDEMPKRDDLAWNEIVMVNLQSGN 606
Query: 176 VAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFG 235
+A +LF M G + YD T
Sbjct: 607 WEKAVKLFRVMRFSGAK-----------------AYDS-------------------TMV 630
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDE---- 291
+L C++ +G++IH + LG +S+ + +L+ MY R L +++ F+
Sbjct: 631 KLLQVCSNKEGFAQGRQIHGYVLRLGFESNVSMCNSLIVMYSRNGKLESSRKVFNSMVDR 690
Query: 292 -----------------IENIENLLGKMKEDGFEPNVYTWNAM--QLFSEMLSLD----- 327
+++ LL +M+ G +P++ TWN++ S+ LS D
Sbjct: 691 NLSSWNSIVSSYTRLGYVDDAMGLLDEMETCGLKPDIVTWNSLLSGYASKALSRDAIAVL 750
Query: 328 -------LTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKC 380
L P+ ++ +L A ++ GK +H Y IR DV++ T L+DMY K
Sbjct: 751 KRIQIAGLKPNTSSISSLLQAVYEPGLVKLGKAIHGYVIRNQLWYDVYVETTLIDMYIKT 810
Query: 381 GSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSAL 440
G L +AR+ + + ++V+ N++++ + G KE A R+ G + + +++ S +
Sbjct: 811 GYLPYARMVFDMMDEKNIVAWNSLISGLSYTGLLKEAEALISRMEKEGIKSNAVTWNSLV 870
Query: 441 SACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIP---MA 497
S G + M V+P++ +T ++ S+ G G + K+ ++
Sbjct: 871 SGYATWGKTEKALAVVGKMKKNGVEPNVVSWTAILSGCSKNGNFGNGLKIFLKMQEEGVS 930
Query: 498 PDSVMWGALLG--GCVS 512
P+S +LL GC+S
Sbjct: 931 PNSATISSLLRILGCLS 947
>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 849
Score = 355 bits (910), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 196/602 (32%), Positives = 319/602 (52%), Gaps = 73/602 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC +++A K+F MPERD LV
Sbjct: 219 MYAKCRLVEEAYKMFDRMPERD------------------------------------LV 242
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
W+ +I G+ QNG+ + A+ ++ RMQ EG P++ T+ S+LPA A + L +G+ HGY
Sbjct: 243 CWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGYS 302
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R GF S V LVD+Y +CG +V AR
Sbjct: 303 MRAGFESFVNVSTALVDMYSKCG-------------------------------SVGTAR 331
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+FD+M + ++SWNSMI GYV N A +F+ + M + +E T+ T L A
Sbjct: 332 LIFDRM----TGKTVVSWNSMIDGYVQNGDPGAAMEIFQKM-MDEQVEMTNVTVMGALHA 386
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CAD+ + +G+ +H L L L SD V +L+ MY + + + A F+ +++ +
Sbjct: 387 CADLGDVEQGRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSW 446
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G+ N A+ F +M ++ PD +T+ ++ A + L+ + + K +H IR
Sbjct: 447 NAMILGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAKWIHGLVIR 506
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
D +V + TALVDMYAKCG++ AR + + + + NAM+ Y HG GK +
Sbjct: 507 TCLDKNVFVATALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGYGTHGLGKAALEL 566
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLS 479
F ++ +P+ ++FL LSAC H+G ++ G ++F M Y ++P++ HY MVDLL
Sbjct: 567 FEKMKKEVIKPNEVTFLCVLSACSHSGLVEEGFQYFGSMKKDYGLEPAMDHYGAMVDLLG 626
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
RA L EA++FI+K+P+ P ++GA+LG C H N+E G+ AA+R+ +L+P++ G +V+
Sbjct: 627 RANRLNEAWDFIQKMPIEPAISVFGAMLGACRIHKNVELGEKAANRIFDLDPDDGGYHVL 686
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTI 599
LAN++A A W +AR R M+ + + K+PG S +E ++E+H F + SH ++++IY
Sbjct: 687 LANIYATASMWDKVARVRTTMEKKGIQKTPGWSVVELQNEVHTFYSGTTSHPQAKKIYAF 746
Query: 600 ID 601
++
Sbjct: 747 LE 748
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 143/543 (26%), Positives = 233/543 (42%), Gaps = 88/543 (16%)
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
+ ++ G+ +N ++A+ RM+ +G+ P + +L C L GKE H +
Sbjct: 143 YHTMLKGYARNSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEIHCQLI 202
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
NGF SN F + G+V++Y +C + A K+F + ++ V NTII GY +NG A E
Sbjct: 203 VNGFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFGKTALE 262
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
L +M+ +G P S T S+L A
Sbjct: 263 LVLRMQ------------------------------------EEGKRPDSITIVSILPAV 286
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK 301
AD+ SLR G+ IH ++ G +S V ALV+MY + + A++ FD + +
Sbjct: 287 ADVGSLRIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWN 346
Query: 302 MKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRC 361
DG+ N AM++F +M+ + TV L AC+ L +E+G+ VH +
Sbjct: 347 SMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGRFVHKLLDQL 406
Query: 362 GYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHF 421
SDV + +L+ MY+KC + A ++ + LVS NAM+ YA +G E I +F
Sbjct: 407 ELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRINEAIDYF 466
Query: 422 RRILASGFRPDHISFLSALSAC-----------VHA------------------------ 446
++ +PD + +S + A +H
Sbjct: 467 CKMQLQNIKPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCLDKNVFVATALVDMYAKC 526
Query: 447 GSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEA----YEFIKKIPMAPDSVM 502
G++ T + FD+M V + M+D G LG+A +E +KK + P+ V
Sbjct: 527 GAVHTARKLFDMMDERHVTT----WNAMIDGYGTHG-LGKAALELFEKMKKEVIKPNEVT 581
Query: 503 WGALLGGCVSHGNLE-----FGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTR 557
+ +L C G +E FG + D LEP +Y + +L A R ++
Sbjct: 582 FLCVLSACSHSGLVEEGFQYFGSMKKD--YGLEP-AMDHYGAMVDLLGRANRLNEAWDFI 638
Query: 558 QKM 560
QKM
Sbjct: 639 QKM 641
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 98/352 (27%), Positives = 174/352 (49%), Gaps = 16/352 (4%)
Query: 170 YCENGNVAEARELF----DQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMR- 224
+C+ G++ EA +F D+++ L +++M+ GY NS D+A S F MR
Sbjct: 119 FCKFGSLHEAARVFQPIEDKIDEL--------YHTMLKGYARNSSLDDAVSFF--CRMRY 168
Query: 225 DGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVA 284
DG+ P + F +L C D LRKGKEIH I G S+ F +V MY + + +
Sbjct: 169 DGVRPVVYNFTYLLKVCGDNADLRKGKEIHCQLIVNGFASNVFAMTGVVNMYAKCRLVEE 228
Query: 285 AQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSS 344
A FD + + + G+ N + A++L M PD T+ IL A +
Sbjct: 229 AYKMFDRMPERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVAD 288
Query: 345 LATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAM 404
+ ++ G+ +H Y++R G++S V++ TALVDMY+KCGS+ ARL + R++ +VS N+M
Sbjct: 289 VGSLRIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSM 348
Query: 405 LTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDV 464
+ Y +G + F++++ +++ + AL AC G ++ G L+ ++
Sbjct: 349 IDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGRFVHKLLDQLEL 408
Query: 465 KPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNL 516
+ ++ + S+ + A E + + V W A++ G +G +
Sbjct: 409 GSDVSVMNSLISMYSKCKRVDIAAEIFENL-QHKTLVSWNAMILGYAQNGRI 459
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 132/286 (46%), Gaps = 8/286 (2%)
Query: 251 KEIH---ALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGF 307
KE+H L I GL S+ LV ++C++ L A F IE+ + L G+
Sbjct: 91 KELHQFIPLIIKNGLYSEHLFQTKLVSLFCKFGSLHEAARVFQPIEDKIDELYHTMLKGY 150
Query: 308 EPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDV 367
N +A+ F M + P +Y +L C A + +GK++H I G+ S+V
Sbjct: 151 ARNSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEIHCQLIVNGFASNV 210
Query: 368 HIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILAS 427
T +V+MYAKC ++ A + R+ DLV N +++ YA +G GK + R+
Sbjct: 211 FAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFGKTALELVLRMQEE 270
Query: 428 GFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEA 487
G RPD I+ +S L A GS++ G + + T +VD+ S+ G +G A
Sbjct: 271 GKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTA 330
Query: 488 YEFIKKIPMAPDSVMWGALLGGCVSHGN----LEFGQIAADRLIEL 529
++ V W +++ G V +G+ +E Q D +E+
Sbjct: 331 RLIFDRM-TGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEM 375
>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 975
Score = 355 bits (910), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 211/666 (31%), Positives = 347/666 (52%), Gaps = 107/666 (16%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWN--------------------------------- 27
MYGK G ++ A KVF MP+R+ VSWN
Sbjct: 240 MYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDV 299
Query: 28 ----SVVTACAA----------NGLVLEALEC--LERMSSL-----------------DN 54
+V+ CA +GL L+ C L+ SSL D
Sbjct: 300 ATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLFDT 359
Query: 55 ETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACAR-LQKLSL 112
N++SW+++IGG++++ A +L +MQ E ++ N TL +VLP C +Q L L
Sbjct: 360 NEKNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKL 419
Query: 113 GKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCE 172
KE HGY R+GF+ + +E+ N + GY +
Sbjct: 420 -KEIHGYALRHGFIQS------------------------------DELVANAFVAGYAK 448
Query: 173 NGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMR-DGIEPTS 231
G++ A +F ME + + SWN++I G+V N +A ++ LLMR G+EP
Sbjct: 449 CGSLHYAEGVFCGME----SKMVSSWNALIGGHVQNGFPRKALDLY--LLMRGSGLEPDL 502
Query: 232 FTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDE 291
FT S+L ACA + SL GKEIH + G + D F+ +LV +Y + ++ A++ FD
Sbjct: 503 FTIASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKILLAKLFFDN 562
Query: 292 IENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG 351
+E + +GF N + ++A+ +F +MLS + PD ++ L ACS ++ + G
Sbjct: 563 MEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGACSQVSALRLG 622
Query: 352 KQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMH 411
K++H +A++ + +L+DMYAKCG ++ ++ + R+ V+ N ++T Y +H
Sbjct: 623 KELHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEVTWNVLITGYGIH 682
Query: 412 GHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKH 470
GHG++ I F+ + +GFRPD ++F++ L+AC HAG + G E+ M + + +KP L+H
Sbjct: 683 GHGRKAIELFKSMQNAGFRPDSVTFIALLTACNHAGLVAEGLEYLGQMQSLFGIKPKLEH 742
Query: 471 YTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELE 530
Y C+VD+L RAG L EA E + ++P PDS +W +LL C ++ +L+ G+ A++L+EL
Sbjct: 743 YACVVDMLGRAGRLNEALELVNELPDKPDSRIWSSLLSSCRNYRDLDIGEKVANKLLELG 802
Query: 531 PNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSH 590
P+ NYV+++N +A G+W ++ + RQ+MK+ + K GCSWIE ++ +F D S
Sbjct: 803 PDKAENYVLISNFYARLGKWDEVRKMRQRMKEIGLQKDAGCSWIEIGGKVSRFLVGDESL 862
Query: 591 DRSEEI 596
+S +I
Sbjct: 863 LQSMKI 868
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 121/472 (25%), Positives = 208/472 (44%), Gaps = 73/472 (15%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQA-EGLEPNARTLSSVLPACARLQKLSLGKEF 116
NL W+A++ G+ +N +A+ + M + P+ TL V+ AC + + LG+
Sbjct: 159 NLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGEAV 218
Query: 117 HGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNV 176
HG+ + +S+ FV N L+ +Y + G + SA+K+F K +N VS N+++ ENG
Sbjct: 219 HGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENG-- 276
Query: 177 AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRD-GIEPTSFTFG 235
+++E++ +F+ LL D G+ P T
Sbjct: 277 ---------------------------------VFEESYGLFKGLLNGDEGLMPDVATMV 303
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
+V+ CA +R G H LA+ LGL + V +L++MY + L A++ FD E
Sbjct: 304 TVIPLCARQGEVRLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLFDTNEK- 362
Query: 296 ENLLGKMKEDGFEPNVYTWNAM--------------QLFSEMLSLD-LTPDIYTVGIILS 340
NV +WN+M +L +M D + + T+ +L
Sbjct: 363 --------------NVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLP 408
Query: 341 ACSSLATMERGKQVHAYAIRCGY-DSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLV 399
C + K++H YA+R G+ SD + A V YAKCGSL +A + + + +
Sbjct: 409 VCEEEIQFLKLKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMVS 468
Query: 400 SQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM 459
S NA++ + +G ++ + + + SG PD + S LSAC S+ G E M
Sbjct: 469 SWNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSM 528
Query: 460 AYYDVKPSLKHYTC--MVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
+ L + C +V L + G++ A F + + V W ++ G
Sbjct: 529 LRNGFE--LDEFICISLVSLYVQCGKILLAKLFFDNME-EKNLVCWNTMING 577
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 114/500 (22%), Positives = 213/500 (42%), Gaps = 102/500 (20%)
Query: 100 VLPACARLQKLSLGKEFHGYI-TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIK 158
+L C + + +G++ H +I T F ++ ++ LV +Y C + +F
Sbjct: 99 LLQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVF------ 152
Query: 159 NEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMF 218
N + + LF WN+++SGY+ NSL+ +A +F
Sbjct: 153 ----------------NASRRKNLF-------------LWNALLSGYLRNSLFRDAVFVF 183
Query: 219 RDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCR 278
+++ P +FT V+ AC + +R G+ +H A+ + SD FVG AL+ MY +
Sbjct: 184 VEMISLTEFVPDNFTLPCVIKACVGVYDVRLGEAVHGFALKTKVLSDVFVGNALIAMYGK 243
Query: 279 YQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQ--------------LFSEML 324
+ + +A FD++ + N+ +WN++ LF +L
Sbjct: 244 FGFVESAVKVFDKMP--------------QRNLVSWNSVMYACLENGVFEESYGLFKGLL 289
Query: 325 SLD--LTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGS 382
+ D L PD+ T+ ++ C+ + G H A++ G ++ + ++L+DMY+KCG
Sbjct: 290 NGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGY 349
Query: 383 LKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRI-LASGFRPDHISFLSALS 441
L AR+ + + +++S N+M+ Y+ + R++ + + + ++ L+ L
Sbjct: 350 LCEARVLFD-TNEKNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLP 408
Query: 442 ACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVD-LLSRAGELGEA----YEFIKKIPM 496
C + +F L + +L+H D L++ A G A + + +
Sbjct: 409 VC------EEEIQFLKLKEIHGY--ALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFC 460
Query: 497 APDSVM---WGALLGGCVSHGNLEFGQIAAD-----RLIELEPNNTGNYVMLANLFAYAG 548
+S M W AL+GG V +G F + A D R LEP +LF A
Sbjct: 461 GMESKMVSSWNALIGGHVQNG---FPRKALDLYLLMRGSGLEP----------DLFTIAS 507
Query: 549 RWSDLARTRQKMKDRRMHKS 568
S AR + + +H S
Sbjct: 508 LLSACARLKSLSCGKEIHGS 527
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 84/185 (45%), Gaps = 3/185 (1%)
Query: 335 VGIILSACSSLATMERGKQVHAY-AIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRI 393
+G++L C +E G+++H + + + +DV + T LV MY+ C S + L +
Sbjct: 96 IGLLLQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFNAS 155
Query: 394 STPDLVSQNAMLTAYAMHGHGKEGIAHFRRILA-SGFRPDHISFLSALSACVHAGSIKTG 452
+L NA+L+ Y + ++ + F +++ + F PD+ + + ACV ++ G
Sbjct: 156 RRKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLG 215
Query: 453 SEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVS 512
V + ++ + + G + A + K+P + V W +++ C+
Sbjct: 216 EAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQR-NLVSWNSVMYACLE 274
Query: 513 HGNLE 517
+G E
Sbjct: 275 NGVFE 279
>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
Length = 803
Score = 355 bits (910), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 206/610 (33%), Positives = 312/610 (51%), Gaps = 85/610 (13%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGK G L +K + RD V+WN+V+++ N +LEALE L M
Sbjct: 158 MYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMV---------- 207
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
EG+EP+ T+SSVLPAC+ L+ L GKE H Y
Sbjct: 208 --------------------------LEGVEPDEFTISSVLPACSHLEMLRTGKELHAYA 241
Query: 121 TRNGFM-SNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+NG + N FV + LVD+Y C +LS ++F + N +I GY +N + EA
Sbjct: 242 LKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEA 301
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
LF ME G+ S T V+
Sbjct: 302 LLLFIGMEESA-----------------------------------GLLANSTTMAGVVP 326
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
AC + + + IH + GL D FV L++MY R + A F ++E+ + +
Sbjct: 327 ACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVT 386
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLD-----------LTPDIYTVGIILSACSSLATM 348
G+ + + +A+ L +M +L+ L P+ T+ IL +C++L+ +
Sbjct: 387 WNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSAL 446
Query: 349 ERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAY 408
+GK++HAYAI+ +DV +G+ALVDMYAKCG L+ +R + +I ++++ N ++ AY
Sbjct: 447 AKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAY 506
Query: 409 AMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPS 467
MHG+G+E I R ++ G +P+ ++F+S +AC H+G + G F +M Y V+PS
Sbjct: 507 GMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPS 566
Query: 468 LKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSV-MWGALLGGCVSHGNLEFGQIAADRL 526
HY C+VDLL RAG + EAY+ + +P + W +LLG H NLE G+IAA L
Sbjct: 567 SDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNL 626
Query: 527 IELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRAS 586
I+LEPN +YV+LAN+++ AG W R+ MK++ + K PGCSWIE DE+HKF A
Sbjct: 627 IQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAG 686
Query: 587 DRSHDRSEEI 596
D SH +SE++
Sbjct: 687 DSSHPQSEKL 696
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 128/485 (26%), Positives = 225/485 (46%), Gaps = 57/485 (11%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARL---QKLSLGK 114
N VSW+++I E A+ M E +EP++ TL SV+ AC+ L + L +GK
Sbjct: 76 NQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGK 135
Query: 115 EFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
+ H Y R G + N F++N LV +Y + G + S+ + F ++ V+ NT++ C+N
Sbjct: 136 QVHAYGLRKGEL-NSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNE 194
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTF 234
+ EA E +M + +G+EP FT
Sbjct: 195 QLLEALEYLREM------------------------------------VLEGVEPDEFTI 218
Query: 235 GSVLIACADMNSLRKGKEIHALAIALG-LQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
SVL AC+ + LR GKE+HA A+ G L ++FVG ALV+MYC + +++ + FD +
Sbjct: 219 SSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMF 278
Query: 294 NIENLLGKMKEDGFEPNVYTWNAMQLFSEM-LSLDLTPDIYTVGIILSACSSLATMERGK 352
+ + L G+ N + A+ LF M S L + T+ ++ AC R +
Sbjct: 279 DRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKE 338
Query: 353 QVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHG 412
+H + ++ G D D + L+DMY++ G + A + ++ DLV+ N M+T Y
Sbjct: 339 AIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSE 398
Query: 413 HGKEGI------AHFRRILASG-----FRPDHISFLSALSACVHAGSIKTGSEFFDLMAY 461
H ++ + + R ++ G +P+ I+ ++ L +C ++ G E
Sbjct: 399 HHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIK 458
Query: 462 YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQI 521
++ + + +VD+ ++ G L + + +IP + + W ++ HGN GQ
Sbjct: 459 NNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQ-KNVITWNVIIMAYGMHGN---GQE 514
Query: 522 AADRL 526
A D L
Sbjct: 515 AIDLL 519
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 111/429 (25%), Positives = 196/429 (45%), Gaps = 44/429 (10%)
Query: 89 GLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGF-MSNPFVVNGLVDVYRRCGDMLS 147
G++P+ ++L A A LQ + LGK+ H ++ + G+ + + V N LV++YR+CGD +
Sbjct: 5 GIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGA 64
Query: 148 ALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVD 207
K+F + S +N+VS WNS+IS
Sbjct: 65 VYKVFDRISERNQVS-----------------------------------WNSLISSLCS 89
Query: 208 NSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADM---NSLRKGKEIHALAIALGLQS 264
++ A FR +L + +EP+SFT SV+ AC+++ L GK++HA + G +
Sbjct: 90 FEKWEMALEAFRCML-DENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-EL 147
Query: 265 DTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEML 324
++F+ LV MY + L ++++ + + N A++ EM+
Sbjct: 148 NSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMV 207
Query: 325 SLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCG-YDSDVHIGTALVDMYAKCGSL 383
+ PD +T+ +L ACS L + GK++HAYA++ G D + +G+ALVDMY C +
Sbjct: 208 LEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQV 267
Query: 384 KHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILAS-GFRPDHISFLSALSA 442
R + + + NAM+ Y+ + H KE + F + S G + + + A
Sbjct: 268 LSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPA 327
Query: 443 CVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVM 502
CV +G+ + + ++D+ SR G++ A K+ D V
Sbjct: 328 CVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKME-DRDLVT 386
Query: 503 WGALLGGCV 511
W ++ G V
Sbjct: 387 WNTMITGYV 395
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 62/122 (50%), Gaps = 1/122 (0%)
Query: 323 MLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSD-VHIGTALVDMYAKCG 381
M+ L + PD Y +L A + L ME GKQ+HA+ + GY D V + LV++Y KCG
Sbjct: 1 MIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCG 60
Query: 382 SLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALS 441
+ RIS + VS N+++++ + + FR +L P + +S ++
Sbjct: 61 DFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVT 120
Query: 442 AC 443
AC
Sbjct: 121 AC 122
>gi|224066034|ref|XP_002302000.1| predicted protein [Populus trichocarpa]
gi|222843726|gb|EEE81273.1| predicted protein [Populus trichocarpa]
Length = 797
Score = 354 bits (909), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 214/652 (32%), Positives = 339/652 (51%), Gaps = 64/652 (9%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETP--- 57
+Y K L+ A+ +F +P+ D V+ +++ A +A G L+ + ++TP
Sbjct: 57 IYSKSSKLNYARYLFDEIPQPDIVARTTLIAAYSAAGD-------LKLSRKIFSDTPLGM 109
Query: 58 -NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARL-QKLSLGKE 115
+ V ++A+I ++ N AI + MQ + P+ T +SVL A A + +K ++
Sbjct: 110 RDSVFYNAMITAYSHNHDGHAAIELFCDMQRDNFRPDNYTFTSVLGALALVAEKEKHCQQ 169
Query: 116 FHGYITRNGFMSNPFVVNGLVDVYRRCGD---------MLSALKIFSKFSIKNEVSCNTI 166
H + ++G V+N L+ Y +C M A K+F + ++E+S TI
Sbjct: 170 LHCAVVKSGTGFVTSVLNALISSYVKCAASPSAQSSSLMAEARKLFDEMPNRDELSWTTI 229
Query: 167 IVGYCENGNVAEARELFD-QMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRD 225
I GY +N ++ A+E + + LGV +WN+MISGY LY EAF MFR ++M
Sbjct: 230 ITGYVKNNDLDAAKEFLNGTSKKLGV-----AWNAMISGYAHRGLYLEAFEMFRKMIMSK 284
Query: 226 GIEPTSFTFGSVLIACADMNSLRKGKEIHA--LAIALGLQSDTF--VGGALVEMYCRYQD 281
I+ FTF SV+ CA+ R GKE+HA L D V AL+ Y +
Sbjct: 285 -IQLDEFTFTSVISVCANAGCFRLGKEMHAYFLKTVANPAPDVAMPVNNALITFYWKCGK 343
Query: 282 LVAAQMAFDEIENIENLLGKMKEDGF-----------------EPNVYTW---------- 314
+ AQ F+++ + + + G+ E N+ +W
Sbjct: 344 VDIAQEIFNKMPERDLVSWNIILSGYVNVRCMDEAKSFFNEMPEKNILSWIIMISGLAQI 403
Query: 315 ----NAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIG 370
A++ F+ M P Y + +CS L +++ G+Q+HA +R GY+S + G
Sbjct: 404 GFAEEALKFFNRMKLQGFEPCDYAFAGAIISCSVLGSLKHGRQLHAQVVRYGYESSLSAG 463
Query: 371 TALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFR 430
AL+ MYA+CG + A + + D +S NAM+ A HG G + I F +L G
Sbjct: 464 NALITMYARCGVVDAAHCLFINMPCVDAISWNAMIAALGQHGQGTQAIELFEEMLKEGIL 523
Query: 431 PDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLLSRAGELGEAYE 489
PD ISFL+ +SAC HAG +K G ++FD M Y V P +HY ++DLL RAG+ EA E
Sbjct: 524 PDRISFLTVISACSHAGLVKEGRKYFDSMHNVYGVNPDEEHYARIIDLLCRAGKFSEAKE 583
Query: 490 FIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGR 549
++ +P P + +W ALL GC HGN++ G AA+RL EL+P + G YV+L+N++A AG+
Sbjct: 584 VMESMPFEPGAPIWEALLAGCRIHGNIDLGIEAAERLFELKPQHDGTYVLLSNMYAVAGQ 643
Query: 550 WSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
W+D+A+ R+ M+DR + K PGCSWIE +++H F D +H +IY ++
Sbjct: 644 WNDMAKVRKLMRDRGVKKEPGCSWIEVENKVHSFLVGDANHPEVRQIYNYLE 695
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 112/481 (23%), Positives = 198/481 (41%), Gaps = 80/481 (16%)
Query: 111 SLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGY 170
SL + H ++ +GF ++N L+D+Y + + A +F + + V+ T+I Y
Sbjct: 30 SLARPVHAHMIASGFQPRGHILNRLIDIYSKSSKLNYARYLFDEIPQPDIVARTTLIAAY 89
Query: 171 CENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPT 230
G++ +R++F LG+ R + +N+MI+ Y N A +F D + RD P
Sbjct: 90 SAAGDLKLSRKIFSDTP-LGM-RDSVFYNAMITAYSHNHDGHAAIELFCD-MQRDNFRPD 146
Query: 231 SFTFGSVLIACADMNSLRKG-KEIHALAIALGLQSDTFVGGALVEMYCRYQD-------- 281
++TF SVL A A + K +++H + G T V AL+ Y +
Sbjct: 147 NYTFTSVLGALALVAEKEKHCQQLHCAVVKSGTGFVTSVLNALISSYVKCAASPSAQSSS 206
Query: 282 -LVAAQMAFDEIENIENLLGKMKEDGFEPNV-----------------YTWNAM------ 317
+ A+ FDE+ N + L G+ N WNAM
Sbjct: 207 LMAEARKLFDEMPNRDELSWTTIITGYVKNNDLDAAKEFLNGTSKKLGVAWNAMISGYAH 266
Query: 318 --------QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRC----GYDS 365
++F +M+ + D +T ++S C++ GK++HAY ++ D
Sbjct: 267 RGLYLEAFEMFRKMIMSKIQLDEFTFTSVISVCANAGCFRLGKEMHAYFLKTVANPAPDV 326
Query: 366 DVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAY----------------- 408
+ + AL+ Y KCG + A+ + ++ DLVS N +L+ Y
Sbjct: 327 AMPVNNALITFYWKCGKVDIAQEIFNKMPERDLVSWNIILSGYVNVRCMDEAKSFFNEMP 386
Query: 409 --------------AMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSE 454
A G +E + F R+ GF P +F A+ +C GS+K G +
Sbjct: 387 EKNILSWIIMISGLAQIGFAEEALKFFNRMKLQGFEPCDYAFAGAIISCSVLGSLKHGRQ 446
Query: 455 FFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
+ Y + SL ++ + +R G + A+ +P D++ W A++ HG
Sbjct: 447 LHAQVVRYGYESSLSAGNALITMYARCGVVDAAHCLFINMPCV-DAISWNAMIAALGQHG 505
Query: 515 N 515
Sbjct: 506 Q 506
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 92/230 (40%), Gaps = 52/230 (22%)
Query: 336 GIILSAC--SSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRI 393
G +L C S + + VHA+ I G+ HI L+D+Y+K L +AR + I
Sbjct: 15 GSLLQICCLQSPISYSLARPVHAHMIASGFQPRGHILNRLIDIYSKSSKLNYARYLFDEI 74
Query: 394 STPDLVSQ---------------------------------NAMLTAYAMHGHGKEGIAH 420
PD+V++ NAM+TAY+ + G I
Sbjct: 75 PQPDIVARTTLIAAYSAAGDLKLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDGHAAIEL 134
Query: 421 FRRILASGFRPDHISFLSALSAC------------VHAGSIKTGSEFFDLMAYYDVKPSL 468
F + FRPD+ +F S L A +H +K+G+ F + + +
Sbjct: 135 FCDMQRDNFRPDNYTFTSVLGALALVAEKEKHCQQLHCAVVKSGTGFVTSVLNALISSYV 194
Query: 469 KHYTCMVDLLSRAGEL-GEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
K C +++ L EA + ++P D + W ++ G V + +L+
Sbjct: 195 K---CAASPSAQSSSLMAEARKLFDEMP-NRDELSWTTIITGYVKNNDLD 240
>gi|297738034|emb|CBI27235.3| unnamed protein product [Vitis vinifera]
Length = 696
Score = 354 bits (909), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 203/571 (35%), Positives = 316/571 (55%), Gaps = 35/571 (6%)
Query: 50 SSLDNETP--------NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVL 101
S L ++TP + SW + T++ EAI M G P+ +VL
Sbjct: 40 SPLTSKTPPKPTSPSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVL 99
Query: 102 PACARLQKLSLGKEFHGYITRNGFMSNPFVV-NGLVDVYRRCGDMLSALKIFSKFSIKNE 160
A + LQ L G++ H + G+ S+ V N LV++Y +CG + K F+
Sbjct: 100 KAVSGLQDLKTGEQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGI--GDKTFTN------ 151
Query: 161 VSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRD 220
N ++ Y + G V +++ LF+ V R ++SWN+MIS + + + EA + FR
Sbjct: 152 ---NALMAMYAKLGRVDDSKALFESF----VDRDMVSWNTMISSFSQSDRFSEALAFFR- 203
Query: 221 LLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALG-LQSDTFVGGALVEMYCRY 279
L++ +G+E T SVL AC+ + L GKEIHA + L ++FVG ALV+MYC
Sbjct: 204 LMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNC 263
Query: 280 QDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSL-DLTPDIYTVGII 338
+ + + + FD I L G+ N A+ LF EM+ + L P+ T+ +
Sbjct: 264 RQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASV 323
Query: 339 LSAC-SSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPD 397
+ AC SLA + +GK++HAYAIR SD+ +G+ALVDMYAKCG L +R + + +
Sbjct: 324 MPACVHSLAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKN 383
Query: 398 LVSQNAMLTAYAMHGHGKEGIAHFRRILASGFR-----PDHISFLSALSACVHAGSIKTG 452
+++ N ++ A MHG G+E + F+ ++A R P+ ++F++ +AC H+G I G
Sbjct: 384 VITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEG 443
Query: 453 SEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSV-MWGALLGGC 510
F M + + V+P+ HY C+VDLL RAG+L EAYE + +P D V W +LLG C
Sbjct: 444 LNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGAC 503
Query: 511 VSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPG 570
H N+E G++AA L+ LEPN +YV+L+N+++ AG W+ R+ M+ + K PG
Sbjct: 504 RIHQNVELGEVAAKNLLHLEPNVASHYVLLSNIYSSAGLWNKAMEVRKNMRQMGVKKEPG 563
Query: 571 CSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
CSWIE RDE+HKF A D SH +SE+++ ++
Sbjct: 564 CSWIEFRDEVHKFMAGDVSHPQSEQLHGFLE 594
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 112/420 (26%), Positives = 179/420 (42%), Gaps = 116/420 (27%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G +DD+K +F+ +RD VSWN+++++
Sbjct: 157 MYAKLGRVDDSKALFESFVDRDMVSWNTMISS---------------------------- 188
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
F+Q+ EA+ M EG+E + T++SVLPAC+ L++L +GKE H Y+
Sbjct: 189 --------FSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYV 240
Query: 121 TRNG-FMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
RN + N FV + LVD+Y C + S ++F + N +I GY NG
Sbjct: 241 LRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNG----- 295
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
L ++A +F +++ G+ P + T SV+
Sbjct: 296 ------------------------------LDEKALILFIEMIKVAGLLPNTTTMASVMP 325
Query: 240 ACA-DMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
AC + ++ KGKEIHA AI L SD VG ALV+MY + L ++ F+E+ N
Sbjct: 326 ACVHSLAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPN---- 381
Query: 299 LGKMKEDGFEPNVYTWN--------------AMQLFSEMLSL-----DLTPDIYTVGIIL 339
NV TWN A++LF M++ + P+ T +
Sbjct: 382 ----------KNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVF 431
Query: 340 SACSSLATMERGKQVHAYAIRCGYDSDVHIGT----ALVDMYAKCGSLKHARLAYKRIST 395
+ACS + G + R +D V + +VD+ + G L+ AY+ ++T
Sbjct: 432 AACSHSGLISEGLNLF---YRMKHDHGVEPTSDHYACVVDLLGRAGQLEE---AYELVNT 485
>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1183
Score = 354 bits (909), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 197/575 (34%), Positives = 314/575 (54%), Gaps = 43/575 (7%)
Query: 27 NSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQ 86
NS++ A G V A + +S P++VSW+++I G NG+ + + +M
Sbjct: 509 NSLIAAYFKFGGVESAHNLFDELSE-----PDVVSWNSMINGCVVNGFSGNGLEIFIQML 563
Query: 87 AEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDML 146
G+E + TL SVL A A + LSLG+ HG+ + F N L+D+Y +CG++
Sbjct: 564 ILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNL- 622
Query: 147 SALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYV 206
NG A E+F +M I+SW S I+ YV
Sbjct: 623 --------------------------NG----ATEVFVKMG----DTTIVSWTSTIAAYV 648
Query: 207 DNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDT 266
LY +A +F D + G+ P +T S++ ACA +SL KG+++H+ I G+ S+
Sbjct: 649 REGLYSDAIGLF-DEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNL 707
Query: 267 FVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSL 326
V AL+ MY + + A++ F +I + + G+ N A++LF +M
Sbjct: 708 PVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDMQK- 766
Query: 327 DLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHA 386
PD T+ +L AC+ LA +++G+++H + +R GY SD+H+ ALVDMYAKCG L A
Sbjct: 767 QFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLA 826
Query: 387 RLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHA 446
+L + I DL+S M+ Y MHG G E I+ F + +G PD SF L+AC H+
Sbjct: 827 QLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSVILNACSHS 886
Query: 447 GSIKTGSEFFDLMAYY-DVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGA 505
G + G +FF+ M V+P L+HY C+VDLL+R G L +AY+FI+ +P+ PD+ +WG
Sbjct: 887 GLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGV 946
Query: 506 LLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRM 565
LL GC H +++ + A+ + ELEP+NT YV+LAN++A A +W ++ + R++M+ R
Sbjct: 947 LLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGF 1006
Query: 566 HKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTII 600
++PGCSWIE + + F A + H +++ I ++
Sbjct: 1007 KQNPGCSWIEVGGKFNIFVAGNSKHPQAKRIDVLL 1041
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 120/416 (28%), Positives = 185/416 (44%), Gaps = 81/416 (19%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG+L+ A +VF M + VSW S + A
Sbjct: 615 MYSKCGNLNGATEVFVKMGDTTIVSWTSTIAA---------------------------- 646
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+ + G +AIG+ MQ++G+ P+ T++S++ ACA L G++ H Y+
Sbjct: 647 --------YVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYV 698
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+NG SN V N L+++Y +CG + A +FSK +K+ VS NT+I GY +N EA
Sbjct: 699 IKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEAL 758
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
ELF L M+ +P T VL A
Sbjct: 759 ELF-------------------------------------LDMQKQFKPDDITMACVLPA 781
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA + +L KG+EIH + G SD V ALV+MY + LV AQ+ FD I + +
Sbjct: 782 CAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISW 841
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG-KQVHAYAI 359
+ G+ + + A+ F+EM + PD + +IL+ACS + G K ++
Sbjct: 842 TVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMRN 901
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST----PDLVSQNAMLTAYAMH 411
CG + + +VD+ A+ G+L AYK I + PD +L+ +H
Sbjct: 902 ECGVEPKLEHYACVVDLLARMGNLSK---AYKFIESMPIKPDTTIWGVLLSGCRIH 954
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 115/497 (23%), Positives = 221/497 (44%), Gaps = 57/497 (11%)
Query: 14 VFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV-SWSAVIGGFTQN 72
+F P R C+ ++V + S N T ++ + +A I F +
Sbjct: 307 IFFKQPRRTCLLHSTVCVS-----------------PSFTNTTHSVTQNQNAKINKFCEM 349
Query: 73 GYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVV 132
G AI +L + ++ L N + SVL CA + L GK H I NG + +
Sbjct: 350 GDLRNAIELLTKSKSYELGLN--SYCSVLQLCAEKKSLEDGKRVHSVIISNGISIDEALG 407
Query: 133 NGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQ 192
LV +Y CGD++ + R++FD++ +
Sbjct: 408 AKLVFMYVNCGDLV-------------------------------QGRKIFDKI----MN 432
Query: 193 RGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKE 252
+ WN ++S Y + E+ S+F+ + + G+ +TF VL A + +++ K
Sbjct: 433 DKVFLWNLLMSEYAKIGNFRESVSLFKK-MQKLGVVGNCYTFTCVLKCFAALGKVKECKR 491
Query: 253 IHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVY 312
+H + LG S+T V +L+ Y ++ + +A FDE+ + + +G N +
Sbjct: 492 VHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGF 551
Query: 313 TWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTA 372
+ N +++F +ML L + D+ T+ +L A +++ + G+ +H + ++ + +V
Sbjct: 552 SGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNT 611
Query: 373 LVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPD 432
L+DMY+KCG+L A + ++ +VS + + AY G + I F + + G RPD
Sbjct: 612 LLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPD 671
Query: 433 HISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIK 492
+ S + AC + S+ G + + + +L ++++ ++ G + EA
Sbjct: 672 IYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFS 731
Query: 493 KIPMAPDSVMWGALLGG 509
KIP+ D V W ++GG
Sbjct: 732 KIPVK-DIVSWNTMIGG 747
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 138/296 (46%), Gaps = 40/296 (13%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGS+++A+ VF +P +D VSWN+++ + N L EALE
Sbjct: 716 MYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEALE---------------- 759
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
LF + +P+ T++ VLPACA L L G+E HG+I
Sbjct: 760 ---------------------LFLDMQKQFKPDDITMACVLPACAGLAALDKGREIHGHI 798
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R G+ S+ V LVD+Y +CG ++ A +F K+ +S +I GY +G EA
Sbjct: 799 LRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAI 858
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
F++M G++ S++ +++ + L +E + F + G+EP + V+
Sbjct: 859 STFNEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDL 918
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
A M +L K + ++ ++ DT + G L+ + D+ A+ + I +E
Sbjct: 919 LARMGNLSKA---YKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELE 971
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 133/283 (46%), Gaps = 3/283 (1%)
Query: 233 TFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI 292
++ SVL CA+ SL GK +H++ I+ G+ D +G LV MY DLV + FD+I
Sbjct: 371 SYCSVLQLCAEKKSLEDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKI 430
Query: 293 ENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGK 352
N + L + + ++ LF +M L + + YT +L ++L ++ K
Sbjct: 431 MNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECK 490
Query: 353 QVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHG 412
+VH Y ++ G+ S+ + +L+ Y K G ++ A + +S PD+VS N+M+ ++G
Sbjct: 491 RVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNG 550
Query: 413 HGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYT 472
G+ F ++L G D + +S L A + G++ G +
Sbjct: 551 FSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSN 610
Query: 473 CMVDLLSRAGELGEAYEFIKKIPMAPDSVM-WGALLGGCVSHG 514
++D+ S+ G L A E K M +++ W + + V G
Sbjct: 611 TLLDMYSKCGNLNGATEVFVK--MGDTTIVSWTSTIAAYVREG 651
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 93/204 (45%), Gaps = 11/204 (5%)
Query: 315 NAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALV 374
NA++L ++ S +L + Y +L C+ ++E GK+VH+ I G D +G LV
Sbjct: 354 NAIELLTKSKSYELGLNSYCS--VLQLCAEKKSLEDGKRVHSVIISNGISIDEALGAKLV 411
Query: 375 DMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHI 434
MY CG L R + +I + N +++ YA G+ +E ++ F+++ G +
Sbjct: 412 FMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCY 471
Query: 435 SFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRA----GELGEAYEF 490
+F L G +K Y +K T +V+ L A G + A+
Sbjct: 472 TFTCVLKCFAALGKVKECKRVHG----YVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNL 527
Query: 491 IKKIPMAPDSVMWGALLGGCVSHG 514
++ PD V W +++ GCV +G
Sbjct: 528 FDELS-EPDVVSWNSMINGCVVNG 550
>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 902
Score = 354 bits (909), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 197/602 (32%), Positives = 316/602 (52%), Gaps = 73/602 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGS D ++VF+ + RD L+
Sbjct: 271 MYAKCGSYKDCRQVFEKLVNRD------------------------------------LI 294
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+ +IGG + GY EEA + +MQ EG+ PN T +L AC L GKE H +
Sbjct: 295 AWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRV 354
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ GF S+ V N L+ +Y RCG ++ +AR
Sbjct: 355 AKAGFTSDIGVQNALISMYSRCG-------------------------------SIKDAR 383
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+FD+M V++ +ISW +MI G + EA ++++++ + G+EP T+ S+L A
Sbjct: 384 LVFDKM----VRKDVISWTAMIGGLAKSGFGAEALTVYQEM-QQAGVEPNRVTYTSILNA 438
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C+ +L G+ IH + GL +D VG LV MY + A+ FD + + +
Sbjct: 439 CSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQRDIVAY 498
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G+ + A++LF + L PD T +L+AC++ ++E +++H +
Sbjct: 499 NAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAREIHTLVRK 558
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
G+ SD +G ALV YAKCGS A + +++++ +++S NA++ A HG G++ +
Sbjct: 559 GGFFSDTSVGNALVSTYAKCGSFSDASIVFEKMTKRNVISWNAIIGGSAQHGRGQDALQL 618
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLS 479
F R+ G +PD ++F+S LSAC HAG ++ G +F M+ + + P+++HY CMVDLL
Sbjct: 619 FERMKMEGVKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSQDFAIIPTIEHYGCMVDLLG 678
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
RAG+L EA IK +P ++ +WGALLG C HGN+ + AA+ ++L+ +N YV
Sbjct: 679 RAGQLDEAEALIKTMPFQANTRIWGALLGACRIHGNVPVAERAAESSLKLDLDNAVVYVA 738
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTI 599
L++++A AG W A+ R+ M+ R + K PG SWI+ D++H F A DRSH +SE+IY
Sbjct: 739 LSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRSWIQVGDKLHYFVAEDRSHPQSEKIYAE 798
Query: 600 ID 601
+D
Sbjct: 799 LD 800
Score = 228 bits (582), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 156/584 (26%), Positives = 264/584 (45%), Gaps = 110/584 (18%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +CGS+++A++V+K L +ER +
Sbjct: 67 MYIQCGSIEEARQVWK-------------------------KLSYMER---------TVH 92
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A++ G+ Q GY E+A+ +L +MQ GL P+ T+ S L +C L G+E H
Sbjct: 93 SWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCKSPGALEWGREIHFQA 152
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G + + V N ++++Y +CG + A ++F K K+ VS I GY + G A
Sbjct: 153 MQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYADCGRSETAF 212
Query: 181 ELFDQMEHLGVQRGIISWNSMISGY--------------------------VDNSL---- 210
E+F +ME GV I++ S+++ + V +L
Sbjct: 213 EIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVGTALVKMY 272
Query: 211 -----YDEAFSMFRDLLMRD------------------------------GIEPTSFTFG 235
Y + +F L+ RD G+ P T+
Sbjct: 273 AKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYV 332
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFD----- 290
+L AC + +L GKEIH+ G SD V AL+ MY R + A++ FD
Sbjct: 333 ILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRK 392
Query: 291 EIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMER 350
++ + ++G + + GF A+ ++ EM + P+ T IL+ACSS A +E
Sbjct: 393 DVISWTAMIGGLAKSGFGA-----EALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEW 447
Query: 351 GKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAM 410
G+++H + G +D H+G LV+MY+ CGS+K AR + R+ D+V+ NAM+ YA
Sbjct: 448 GRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQRDIVAYNAMIGGYAA 507
Query: 411 HGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKH 470
H GKE + F R+ G +PD +++++ L+AC ++GS++ E L+
Sbjct: 508 HNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAREIHTLVRKGGFFSDTSV 567
Query: 471 YTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
+V ++ G +A +K+ + + W A++GG HG
Sbjct: 568 GNALVSTYAKCGSFSDASIVFEKMT-KRNVISWNAIIGGSAQHG 610
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 149/328 (45%), Gaps = 12/328 (3%)
Query: 222 LMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQD 281
L + G + S + +L C ++ L G+++H I D + AL+ MY +
Sbjct: 14 LQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALINMYIQCGS 73
Query: 282 LVAAQMAFDEIENIENLLGKMKE--DGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIIL 339
+ A+ + ++ +E + G+ Y A++L +M L PD T+ L
Sbjct: 74 IEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFL 133
Query: 340 SACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLV 399
S+C S +E G+++H A++ G DV + +++MYAKCGS++ AR + ++ +V
Sbjct: 134 SSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVV 193
Query: 400 SQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM 459
S + YA G + F+++ G P+ I+++S L+A ++K G +
Sbjct: 194 SWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRI 253
Query: 460 AYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE-- 517
+ T +V + ++ G + + +K+ + D + W ++GG G E
Sbjct: 254 LNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKL-VNRDLIAWNTMIGGLAEGGYWEEA 312
Query: 518 ---FGQIAADRLIELEPNNTGNYVMLAN 542
+ Q+ + ++ PN YV+L N
Sbjct: 313 SEVYNQMQREGVM---PNKI-TYVILLN 336
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 113/233 (48%), Gaps = 22/233 (9%)
Query: 338 ILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPD 397
+L C + + G+QVH + I+ D + AL++MY +CGS++ AR +K++S +
Sbjct: 29 MLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALINMYIQCGSIEEARQVWKKLSYME 88
Query: 398 LV--SQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEF 455
S NAM+ Y +G+ ++ + R++ G PD + +S LS+C G+++ G E
Sbjct: 89 RTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCKSPGALEWGREI 148
Query: 456 -FDLMA---YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCV 511
F M +DVK + C++++ ++ G + EA E K+ V W +GG
Sbjct: 149 HFQAMQAGLLFDVKVA----NCILNMYAKCGSIEEAREVFDKME-KKSVVSWTITIGGYA 203
Query: 512 SHGNLE-----FGQIAADRLIELEPNNTGNYVMLANLFA--YAGRWSDLARTR 557
G E F ++ + ++ PN Y+ + N F+ A +W +R
Sbjct: 204 DCGRSETAFEIFQKMEQEGVV---PNRI-TYISVLNAFSSPAALKWGKAVHSR 252
>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 933
Score = 354 bits (909), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 202/616 (32%), Positives = 340/616 (55%), Gaps = 63/616 (10%)
Query: 1 MYGKCGSLDDAKK-------VFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLD 53
M C L D+ + + K+ + D S N++V A G + +A+ E++
Sbjct: 264 MVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKI---- 319
Query: 54 NETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLG 113
+ P++VSW+AVI G + + E+A+ +L +M+ G+ PN TLSS L ACA + LG
Sbjct: 320 -KQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELG 378
Query: 114 KEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCEN 173
++ H + + S+ FV GLVD+Y +C D+L
Sbjct: 379 RQLHSSLMKMDMESDLFVSVGLVDMYSKC-DLLE-------------------------- 411
Query: 174 GNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFT 233
+AR F+ + ++ +I+WN++ISGY EA S+F ++ ++GI T
Sbjct: 412 ----DARMAFNLLP----EKDLIAWNAIISGYSQYWEDMEALSLFVEM-HKEGIGFNQTT 462
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
++L + A + + +++H L++ G SD +V +L++ Y + + A+ F+E
Sbjct: 463 LSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEEC- 521
Query: 294 NIENLLGKMKEDGFEPNVYTW-------NAMQLFSEMLSLDLTPDIYTVGIILSACSSLA 346
I +L+ F + + A++LF EM ++L PD + +L+AC++L+
Sbjct: 522 TIGDLVS------FTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLS 575
Query: 347 TMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLT 406
E+GKQ+H + ++ G+ D+ G +LV+MYAKCGS+ A A+ ++ +VS +AM+
Sbjct: 576 AFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIG 635
Query: 407 AYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVK 465
A HGHG++ + F ++L G P+HI+ +S L AC HAG + +F+ M + K
Sbjct: 636 GLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFK 695
Query: 466 PSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADR 525
P +HY CM+DLL RAG++ EA E + K+P ++ +WGALLG H ++E G+ AA+
Sbjct: 696 PMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGAARIHKDVELGRRAAEM 755
Query: 526 LIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRA 585
L LEP +G +V+LAN++A AG+W ++A R+ M+D ++ K PG SWIE +D+++ F
Sbjct: 756 LFILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKKEPGMSWIEVKDKVYTFLV 815
Query: 586 SDRSHDRSEEIYTIID 601
DRSH RS+EIY +D
Sbjct: 816 GDRSHYRSQEIYAKLD 831
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 138/486 (28%), Positives = 235/486 (48%), Gaps = 41/486 (8%)
Query: 34 AANGLVLEALECLERMSS--LDNETP--NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEG 89
AN LV+ +C E + S L +E P N+VSW+A+ + Q + EA+G+ + M G
Sbjct: 194 VANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSG 253
Query: 90 LEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSAL 149
++PN +LSS++ AC L+ S GK HGY+ + G+ +PF N LVD+Y + GD+ A+
Sbjct: 254 IKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAI 313
Query: 150 KIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNS 209
+F K + VS N +I G + + +A EL QM+
Sbjct: 314 SVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMK---------------------- 351
Query: 210 LYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVG 269
R GI P FT S L ACA M G+++H+ + + ++SD FV
Sbjct: 352 --------------RSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVS 397
Query: 270 GALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLT 329
LV+MY + L A+MAF+ + + + G+ A+ LF EM +
Sbjct: 398 VGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIG 457
Query: 330 PDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLA 389
+ T+ IL + + L + +QVH +++ G+ SD+++ +L+D Y KC ++ A
Sbjct: 458 FNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERI 517
Query: 390 YKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSI 449
++ + DLVS +M+TAYA +G G+E + F + +PD S L+AC + +
Sbjct: 518 FEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAF 577
Query: 450 KTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
+ G + + Y + +V++ ++ G + +A ++ V W A++GG
Sbjct: 578 EQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELT-ERGIVSWSAMIGG 636
Query: 510 CVSHGN 515
HG+
Sbjct: 637 LAQHGH 642
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 127/459 (27%), Positives = 212/459 (46%), Gaps = 65/459 (14%)
Query: 65 VIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNG 124
+I Q D + +L + P + + S +L C + L G + H +IT++G
Sbjct: 27 LIQTVPQFSQDPQTTAILNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSG 86
Query: 125 FMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFD 184
+P + N L+++Y +C + GY AR+L D
Sbjct: 87 LSDDPSIRNHLINLYSKCRNF-----------------------GY--------ARKLVD 115
Query: 185 QMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADM 244
+ + ++SW+++ISGY N L A F ++ + G++ FTF SVL AC+ +
Sbjct: 116 E----SSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLL-GVKCNEFTFSSVLKACSIV 170
Query: 245 NSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKE 304
LR GK++H + + G + D FV LV MY + + + ++ FDEI
Sbjct: 171 KDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIP----------- 219
Query: 305 DGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSSLATMER 350
E NV +WNA+ LF EM+ + P+ +++ +++AC+ L R
Sbjct: 220 ---ERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSR 276
Query: 351 GKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAM 410
GK +H Y I+ GYD D ALVDMYAK G L A +++I PD+VS NA++ +
Sbjct: 277 GKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVL 336
Query: 411 HGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKH 470
H H ++ + ++ SG P+ + SAL AC G + G + + D++ L
Sbjct: 337 HEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFV 396
Query: 471 YTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
+VD+ S+ L +A +P D + W A++ G
Sbjct: 397 SVGLVDMYSKCDLLEDARMAFNLLP-EKDLIAWNAIISG 434
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 142/317 (44%), Gaps = 23/317 (7%)
Query: 212 DEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGA 271
D + +L+ + PTS ++ +L C SLR G +IHA GL D +
Sbjct: 37 DPQTTAILNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNH 96
Query: 272 LVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPD 331
L+ +Y + ++ A+ DE + + G+ N A+ F EM L + +
Sbjct: 97 LINLYSKCRNFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCN 156
Query: 332 IYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYK 391
+T +L ACS + + GKQVH + G++ DV + LV MYAKC ++ +
Sbjct: 157 EFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFD 216
Query: 392 RISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSAC-------- 443
I ++VS NA+ + Y E + F ++ SG +P+ S S ++AC
Sbjct: 217 EIPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSR 276
Query: 444 ---VHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDS 500
+H IK G YD P +VD+ ++ G+L +A +KI PD
Sbjct: 277 GKIIHGYLIKLG---------YDWDPF--SANALVDMYAKVGDLADAISVFEKIKQ-PDI 324
Query: 501 VMWGALLGGCVSHGNLE 517
V W A++ GCV H + E
Sbjct: 325 VSWNAVIAGCVLHEHHE 341
>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
Length = 675
Score = 354 bits (908), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 190/555 (34%), Positives = 307/555 (55%), Gaps = 14/555 (2%)
Query: 55 ETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGK 114
+ PNL+ W+ ++ G + A+ M RM + G PN+ + +L +CA+ + G+
Sbjct: 25 QEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKSCAKSKAFEEGR 84
Query: 115 EFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
+ H + + G + +V L+ +Y R G + A K+F S ++ VSC +I GY G
Sbjct: 85 QIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTALITGYASRG 144
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTF 234
+ AR++FD++ +R ++SWN+MI+GYV+N Y+EA +F+++ MR + P T
Sbjct: 145 DFRSARKVFDEI----TERDVVSWNAMITGYVENGRYEEALELFKEM-MRTNVRPDEGTL 199
Query: 235 GSVLIACADMNSLRKGKEIHALAIAL----GLQSDTFVGGALVEMYCRYQDLVAAQMAFD 290
SV+ ACA S+ G+++H+ G S + AL+++Y + D+ A F+
Sbjct: 200 VSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAFGLFE 259
Query: 291 EIENIENLLGKMKEDGF-EPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATME 349
+ + + G+ N+Y A+ LF EML P+ T+ +L AC+ L ++
Sbjct: 260 GLSCKDVVSWNTLIGGYTHTNLYK-EALLLFQEMLRSGECPNDVTLLSVLPACAHLGAID 318
Query: 350 RGKQVHAYAIRC--GYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTA 407
G+ +H Y + G ++ + T+L+DMYAKCG ++ A + + L S NAM+
Sbjct: 319 IGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWNAMIFG 378
Query: 408 YAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKP 466
+AMHG F R+ + PD I+F+ LSAC H+G + G + F M Y++ P
Sbjct: 379 FAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQDYNLTP 438
Query: 467 SLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRL 526
L+HY CM+DLL +G EA E I +PM PD V+W +LL C HGNLE + A +L
Sbjct: 439 KLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHGNLELAESFAQKL 498
Query: 527 IELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRAS 586
I++EP N+G+YV+L+N++A AGRW D+AR R + + M K PGCS IE +H+F
Sbjct: 499 IKIEPENSGSYVLLSNIYATAGRWEDVARVRGVLNGKGMKKVPGCSSIEVDSVVHEFIIG 558
Query: 587 DRSHDRSEEIYTIID 601
D+ H R EIY +++
Sbjct: 559 DKLHPRRREIYHMLE 573
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 123/439 (28%), Positives = 201/439 (45%), Gaps = 85/439 (19%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY + G L+DA+KVF RD VS +++T A+ G A + + ++ D +V
Sbjct: 108 MYARNGGLEDARKVFDASSHRDVVSCTALITGYASRGDFRSARKVFDEITERD-----VV 162
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A+I G+ +NG EEA+ + M + P+ TL SV+ ACA+ + LG++ H ++
Sbjct: 163 SWNAMITGYVENGRYEEALELFKEMMRTNVRPDEGTLVSVVSACAQSGSIELGRQVHSWV 222
Query: 121 ----TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNV 176
+GF S+ +VN L+D+Y +CGD+ +A +F S K+ VS NT+I GY
Sbjct: 223 DDDDDDHGFSSSLKIVNALIDLYSKCGDVETAFGLFEGLSCKDVVSWNTLIGGY------ 276
Query: 177 AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGS 236
+LY EA +F+++L R G P T S
Sbjct: 277 -----------------------------THTNLYKEALLLFQEML-RSGECPNDVTLLS 306
Query: 237 VLIACADMNSLRKGKEIHAL--AIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIEN 294
VL ACA + ++ G+ IH G+ ++T + +L++MY + D+ AA F+ +
Sbjct: 307 VLPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSM-- 364
Query: 295 IENLLGKMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILS 340
++ +WNAM LFS M + PD T +LS
Sbjct: 365 ------------LYRSLSSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLS 412
Query: 341 ACSSLATMERGKQVHAYAIRCGYDSDV-----HIGTALVDMYAKCGSLKHA-RLAYKRIS 394
ACS ++ G+Q+ + D ++ H G ++D+ G K A + +
Sbjct: 413 ACSHSGLLDLGRQIFKSMTQ---DYNLTPKLEHYG-CMIDLLGHSGLFKEAEEMIHTMPM 468
Query: 395 TPDLVSQNAMLTAYAMHGH 413
PD V ++L A HG+
Sbjct: 469 EPDGVIWCSLLKACKKHGN 487
>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g57430, chloroplastic; Flags: Precursor
gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 890
Score = 354 bits (908), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 206/610 (33%), Positives = 312/610 (51%), Gaps = 85/610 (13%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGK G L +K + RD V+WN+V+++ N +LEALE L M
Sbjct: 245 MYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMV---------- 294
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
EG+EP+ T+SSVLPAC+ L+ L GKE H Y
Sbjct: 295 --------------------------LEGVEPDEFTISSVLPACSHLEMLRTGKELHAYA 328
Query: 121 TRNGFM-SNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+NG + N FV + LVD+Y C +LS ++F + N +I GY +N + EA
Sbjct: 329 LKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEA 388
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
LF ME G+ S T V+
Sbjct: 389 LLLFIGMEESA-----------------------------------GLLANSTTMAGVVP 413
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
AC + + + IH + GL D FV L++MY R + A F ++E+ + +
Sbjct: 414 ACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVT 473
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLD-----------LTPDIYTVGIILSACSSLATM 348
G+ + + +A+ L +M +L+ L P+ T+ IL +C++L+ +
Sbjct: 474 WNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSAL 533
Query: 349 ERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAY 408
+GK++HAYAI+ +DV +G+ALVDMYAKCG L+ +R + +I ++++ N ++ AY
Sbjct: 534 AKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAY 593
Query: 409 AMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPS 467
MHG+G+E I R ++ G +P+ ++F+S +AC H+G + G F +M Y V+PS
Sbjct: 594 GMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPS 653
Query: 468 LKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSV-MWGALLGGCVSHGNLEFGQIAADRL 526
HY C+VDLL RAG + EAY+ + +P + W +LLG H NLE G+IAA L
Sbjct: 654 SDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNL 713
Query: 527 IELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRAS 586
I+LEPN +YV+LAN+++ AG W R+ MK++ + K PGCSWIE DE+HKF A
Sbjct: 714 IQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAG 773
Query: 587 DRSHDRSEEI 596
D SH +SE++
Sbjct: 774 DSSHPQSEKL 783
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 128/485 (26%), Positives = 225/485 (46%), Gaps = 57/485 (11%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARL---QKLSLGK 114
N VSW+++I E A+ M E +EP++ TL SV+ AC+ L + L +GK
Sbjct: 163 NQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGK 222
Query: 115 EFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
+ H Y R G + N F++N LV +Y + G + S+ + F ++ V+ NT++ C+N
Sbjct: 223 QVHAYGLRKGEL-NSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNE 281
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTF 234
+ EA E +M + +G+EP FT
Sbjct: 282 QLLEALEYLREM------------------------------------VLEGVEPDEFTI 305
Query: 235 GSVLIACADMNSLRKGKEIHALAIALG-LQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
SVL AC+ + LR GKE+HA A+ G L ++FVG ALV+MYC + +++ + FD +
Sbjct: 306 SSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMF 365
Query: 294 NIENLLGKMKEDGFEPNVYTWNAMQLFSEM-LSLDLTPDIYTVGIILSACSSLATMERGK 352
+ + L G+ N + A+ LF M S L + T+ ++ AC R +
Sbjct: 366 DRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKE 425
Query: 353 QVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHG 412
+H + ++ G D D + L+DMY++ G + A + ++ DLV+ N M+T Y
Sbjct: 426 AIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSE 485
Query: 413 HGKEGI------AHFRRILASG-----FRPDHISFLSALSACVHAGSIKTGSEFFDLMAY 461
H ++ + + R ++ G +P+ I+ ++ L +C ++ G E
Sbjct: 486 HHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIK 545
Query: 462 YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQI 521
++ + + +VD+ ++ G L + + +IP + + W ++ HGN GQ
Sbjct: 546 NNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQK-NVITWNVIIMAYGMHGN---GQE 601
Query: 522 AADRL 526
A D L
Sbjct: 602 AIDLL 606
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 115/456 (25%), Positives = 205/456 (44%), Gaps = 44/456 (9%)
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W ++ ++ EA+ M G++P+ ++L A A LQ + LGK+ H ++
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 122 RNGF-MSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G+ + + V N LV++YR+CGD + K+F + S +N+VS
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVS------------------ 166
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
WNS+IS ++ A FR +L + +EP+SFT SV+ A
Sbjct: 167 -----------------WNSLISSLCSFEKWEMALEAFRCML-DENVEPSSFTLVSVVTA 208
Query: 241 CADM---NSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
C+++ L GK++HA + G + ++F+ LV MY + L ++++ +
Sbjct: 209 CSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDL 267
Query: 298 LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAY 357
+ N A++ EM+ + PD +T+ +L ACS L + GK++HAY
Sbjct: 268 VTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAY 327
Query: 358 AIRCG-YDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKE 416
A++ G D + +G+ALVDMY C + R + + + NAM+ Y+ + H KE
Sbjct: 328 ALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKE 387
Query: 417 GIAHFRRILAS-GFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMV 475
+ F + S G + + + ACV +G+ + + ++
Sbjct: 388 ALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLM 447
Query: 476 DLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCV 511
D+ SR G++ A K+ D V W ++ G V
Sbjct: 448 DMYSRLGKIDIAMRIFGKME-DRDLVTWNTMITGYV 482
>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
Length = 890
Score = 354 bits (908), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 206/610 (33%), Positives = 312/610 (51%), Gaps = 85/610 (13%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGK G L +K + RD V+WN+V+++ N +LEALE L M
Sbjct: 245 MYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMV---------- 294
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
EG+EP+ T+SSVLPAC+ L+ L GKE H Y
Sbjct: 295 --------------------------LEGVEPDEFTISSVLPACSHLEMLRTGKELHAYA 328
Query: 121 TRNGFM-SNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+NG + N FV + LVD+Y C +LS ++F + N +I GY +N + EA
Sbjct: 329 LKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEA 388
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
LF ME G+ S T V+
Sbjct: 389 LLLFIGMEESA-----------------------------------GLLANSTTMAGVVP 413
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
AC + + + IH + GL D FV L++MY R + A F ++E+ + +
Sbjct: 414 ACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVT 473
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLD-----------LTPDIYTVGIILSACSSLATM 348
G+ + + +A+ L +M +L+ L P+ T+ IL +C++L+ +
Sbjct: 474 WNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSAL 533
Query: 349 ERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAY 408
+GK++HAYAI+ +DV +G+ALVDMYAKCG L+ +R + +I ++++ N ++ AY
Sbjct: 534 AKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAY 593
Query: 409 AMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPS 467
MHG+G+E I R ++ G +P+ ++F+S +AC H+G + G F +M Y V+PS
Sbjct: 594 GMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPS 653
Query: 468 LKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSV-MWGALLGGCVSHGNLEFGQIAADRL 526
HY C+VDLL RAG + EAY+ + +P + W +LLG H NLE G+IAA L
Sbjct: 654 SDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNL 713
Query: 527 IELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRAS 586
I+LEPN +YV+LAN+++ AG W R+ MK++ + K PGCSWIE DE+HKF A
Sbjct: 714 IQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAG 773
Query: 587 DRSHDRSEEI 596
D SH +SE++
Sbjct: 774 DSSHPQSEKL 783
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 128/485 (26%), Positives = 225/485 (46%), Gaps = 57/485 (11%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARL---QKLSLGK 114
N VSW+++I E A+ M E +EP++ TL SV+ AC+ L + L +GK
Sbjct: 163 NQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGK 222
Query: 115 EFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
+ H Y R G + N F++N LV +Y + G + S+ + F ++ V+ NT++ C+N
Sbjct: 223 QVHAYGLRKGEL-NSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNE 281
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTF 234
+ EA E +M + +G+EP FT
Sbjct: 282 QLLEALEYLREM------------------------------------VLEGVEPDEFTI 305
Query: 235 GSVLIACADMNSLRKGKEIHALAIALG-LQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
SVL AC+ + LR GKE+HA A+ G L ++FVG ALV+MYC + +++ + FD +
Sbjct: 306 SSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMF 365
Query: 294 NIENLLGKMKEDGFEPNVYTWNAMQLFSEM-LSLDLTPDIYTVGIILSACSSLATMERGK 352
+ + L G+ N + A+ LF M S L + T+ ++ AC R +
Sbjct: 366 DRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKE 425
Query: 353 QVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHG 412
+H + ++ G D D + L+DMY++ G + A + ++ DLV+ N M+T Y
Sbjct: 426 AIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSE 485
Query: 413 HGKEGI------AHFRRILASG-----FRPDHISFLSALSACVHAGSIKTGSEFFDLMAY 461
H ++ + + R ++ G +P+ I+ ++ L +C ++ G E
Sbjct: 486 HHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIK 545
Query: 462 YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQI 521
++ + + +VD+ ++ G L + + +IP + + W ++ HGN GQ
Sbjct: 546 NNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQK-NVITWNVIIMAYGMHGN---GQE 601
Query: 522 AADRL 526
A D L
Sbjct: 602 AIDLL 606
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 115/456 (25%), Positives = 205/456 (44%), Gaps = 44/456 (9%)
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W ++ ++ EA+ M G++P+ ++L A A LQ + LGK+ H ++
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 122 RNGF-MSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G+ + + V N LV++YR+CGD + K+F + S +N+VS
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVS------------------ 166
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
WNS+IS ++ A FR +L + +EP+SFT SV+ A
Sbjct: 167 -----------------WNSLISSLCSFEKWEMALEAFRCML-DENVEPSSFTLVSVVTA 208
Query: 241 CADM---NSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
C+++ L GK++HA + G + ++F+ LV MY + L ++++ +
Sbjct: 209 CSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDL 267
Query: 298 LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAY 357
+ N A++ EM+ + PD +T+ +L ACS L + GK++HAY
Sbjct: 268 VTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAY 327
Query: 358 AIRCG-YDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKE 416
A++ G D + +G+ALVDMY C + R + + + NAM+ Y+ + H KE
Sbjct: 328 ALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKE 387
Query: 417 GIAHFRRILAS-GFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMV 475
+ F + S G + + + ACV +G+ + + ++
Sbjct: 388 ALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLM 447
Query: 476 DLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCV 511
D+ SR G++ A K+ D V W ++ G V
Sbjct: 448 DMYSRLGKIDIAMRIFGKME-DRDLVTWNTMITGYV 482
>gi|225457861|ref|XP_002279169.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g77010, mitochondrial-like [Vitis vinifera]
Length = 685
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 207/636 (32%), Positives = 337/636 (52%), Gaps = 66/636 (10%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLD------- 53
MY +C S+ +A+++F+ MP+R+C SWN+++ +G ++LE + M D
Sbjct: 51 MYSRCNSMREAQQLFEEMPKRNCFSWNTMIEGYLKSGSKGKSLELFDSMPHKDAFSWNVV 110
Query: 54 -----------------NETP--NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEP-- 92
NE P N ++W+++I G+ NG +EA+G+ + LE
Sbjct: 111 ISGFAKEGNLEVARRLFNEMPWKNGIAWNSMIHGYACNGRPKEAVGLFKDLSLNPLERFC 170
Query: 93 -NARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKI 151
+ L++V+ AC L L GK+ H I + + + + LV++Y +CGD+ SA +
Sbjct: 171 GDTFVLATVVGACTNLGALDCGKQIHARIVVDEVEFDSVLGSSLVNLYGKCGDIDSANHV 230
Query: 152 FSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLY 211
+ + S + +I GY G + +AR +F L ++ WNSMISGYV N+
Sbjct: 231 LNLMKEPDAFSLSALISGYASCGRMNDARRIF----CLKSNACVVLWNSMISGYVANNEA 286
Query: 212 DEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGA 271
EA +F ++ R G++ TF SVL AC+ + + +G ++HA +G +D + A
Sbjct: 287 LEALELFNNM-RRKGVQEDYSTFASVLSACSTLGIIDQGIQVHAHVYKVGFTNDIIIDSA 345
Query: 272 LVEMY--CRYQD----LVAAQMAFD---------------EIENIENLLGKMKED----- 305
LV+MY CR D L + A+D I++ + M
Sbjct: 346 LVDMYSKCRRPDDACKLFSDLQAYDTILLNSMITVYSNCGRIDDARQIFDTMPSKSLISW 405
Query: 306 -----GFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
GF N A+ LF EM L L D +++ ++SAC+S++++E G+Q+ A A
Sbjct: 406 NSMIVGFSQNACPIEALDLFCEMNKLGLRMDKFSLAGVISACASISSLELGEQIFARATI 465
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
G + D I T+LVD Y KCG ++H R + R+ D V N+ML YA +GHG E +
Sbjct: 466 IGLEFDQIISTSLVDFYCKCGLVEHGRKLFDRMMKSDEVPWNSMLMGYATNGHGIEALNV 525
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLS 479
F ++ + G +P I+F+ LSAC H G ++ G ++F M Y + P ++HY+CMVDL +
Sbjct: 526 FDQMRSVGVQPTDITFVGVLSACDHCGLVEEGRKWFYAMKLDYHINPGIEHYSCMVDLYA 585
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
RAG L +A I+++P+ D+ MW ++L GCV+HGN G+ A R+I+L+P N+G YV
Sbjct: 586 RAGLLEDAMNLIEQMPLKADTSMWSSVLRGCVAHGNNILGKKVAKRIIDLDPENSGAYVQ 645
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIE 575
L+ ++A W A+ R+ M D+++ K PGCSW +
Sbjct: 646 LSGIYATFEDWGRSAQVRKLMYDKKIPKVPGCSWAD 681
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 124/512 (24%), Positives = 221/512 (43%), Gaps = 93/512 (18%)
Query: 96 TLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVV-NGLVDVYRRCGDMLSALKIFSK 154
+L+ L +C + G+ H ++G + + + N L+ +Y RC M A ++F +
Sbjct: 8 SLARQLGSCNNYGSIYRGRLLHILFLKSGVLHSVLSIGNRLLQMYSRCNSMREAQQLFEE 67
Query: 155 FSIKNEVSCNTIIVGYCENGNVAEARELFDQMEH------------------LGVQRGI- 195
+N S NT+I GY ++G+ ++ ELFD M H L V R +
Sbjct: 68 MPKRNCFSWNTMIEGYLKSGSKGKSLELFDSMPHKDAFSWNVVISGFAKEGNLEVARRLF 127
Query: 196 --------ISWNSMISGYVDNSLYDEAFSMFRDLLMR--DGIEPTSFTFGSVLIACADMN 245
I+WNSMI GY N EA +F+DL + + +F +V+ AC ++
Sbjct: 128 NEMPWKNGIAWNSMIHGYACNGRPKEAVGLFKDLSLNPLERFCGDTFVLATVVGACTNLG 187
Query: 246 SLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL------- 298
+L GK+IHA + ++ D+ +G +LV +Y + D+ +A + ++ +
Sbjct: 188 ALDCGKQIHARIVVDEVEFDSVLGSSLVNLYGKCGDIDSANHVLNLMKEPDAFSLSALIS 247
Query: 299 ----LGKMKE--------------------DGFEPNVYTWNAMQLFSEMLSLDLTPDIYT 334
G+M + G+ N A++LF+ M + D T
Sbjct: 248 GYASCGRMNDARRIFCLKSNACVVLWNSMISGYVANNEALEALELFNNMRRKGVQEDYST 307
Query: 335 VGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAK--------------- 379
+LSACS+L +++G QVHA+ + G+ +D+ I +ALVDMY+K
Sbjct: 308 FASVLSACSTLGIIDQGIQVHAHVYKVGFTNDIIIDSALVDMYSKCRRPDDACKLFSDLQ 367
Query: 380 ----------------CGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRR 423
CG + AR + + + L+S N+M+ ++ + E + F
Sbjct: 368 AYDTILLNSMITVYSNCGRIDDARQIFDTMPSKSLISWNSMIVGFSQNACPIEALDLFCE 427
Query: 424 ILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGE 483
+ G R D S +SAC S++ G + F ++ T +VD + G
Sbjct: 428 MNKLGLRMDKFSLAGVISACASISSLELGEQIFARATIIGLEFDQIISTSLVDFYCKCGL 487
Query: 484 LGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
+ + ++ M D V W ++L G ++G+
Sbjct: 488 VEHGRKLFDRM-MKSDEVPWNSMLMGYATNGH 518
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 92/207 (44%), Gaps = 21/207 (10%)
Query: 331 DIYTVGIILSACSSLATMERGKQVHAYAIRCG-YDSDVHIGTALVDMYAKCGSLKHARLA 389
D++++ L +C++ ++ RG+ +H ++ G S + IG L+ MY++C S++ A+
Sbjct: 5 DLHSLARQLGSCNNYGSIYRGRLLHILFLKSGVLHSVLSIGNRLLQMYSRCNSMREAQQL 64
Query: 390 YKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSI 449
++ + + S N M+ Y G + + F + D S+ +S G++
Sbjct: 65 FEEMPKRNCFSWNTMIEGYLKSGSKGKSLELFDSMP----HKDAFSWNVVISGFAKEGNL 120
Query: 450 KTGSEFFDLMAYYD--VKPSLKH-YTCMVDLLSRAGELGEAYEFIKKIPMAP------DS 500
+ F+ M + + S+ H Y C G EA K + + P D+
Sbjct: 121 EVARRLFNEMPWKNGIAWNSMIHGYAC-------NGRPKEAVGLFKDLSLNPLERFCGDT 173
Query: 501 VMWGALLGGCVSHGNLEFGQIAADRLI 527
+ ++G C + G L+ G+ R++
Sbjct: 174 FVLATVVGACTNLGALDCGKQIHARIV 200
>gi|413918370|gb|AFW58302.1| hypothetical protein ZEAMMB73_070872 [Zea mays]
Length = 688
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 214/640 (33%), Positives = 327/640 (51%), Gaps = 82/640 (12%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y + G L +A++VF +P R+ S+N++++A A G EA E + P+ S
Sbjct: 62 YARLGRLREARRVFDGIPLRNTFSYNALLSAYARLGRPDEARALFEAIPD-----PDQCS 116
Query: 62 WSAVIGGFTQN--GYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
++AV+ ++ G+ +A+ L M A+ NA + +S L ACA + L G++ HG
Sbjct: 117 YNAVVAALARHGRGHAGDALRFLAAMHADDFVLNAYSFASALSACAAEKDLRTGEQVHGL 176
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ R+ + + LVD+Y +C + A ++F +N VS N++I Y +NG V EA
Sbjct: 177 VARSPHADDVHIGTALVDMYAKCERPVDARRVFDAMPERNVVSWNSLITCYEQNGPVGEA 236
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
LF +M M G P T SV+
Sbjct: 237 LVLFVEM------------------------------------MATGFFPDEVTLSSVMS 260
Query: 240 ACADMNSLRKGKEIHALAIALG-LQSDTFVGGALVEMYCRYQDLVAAQMAFDE------I 292
ACA + + R+G+++HA + L+ D + ALV+MY + A+ FD +
Sbjct: 261 ACAGLAAEREGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSVV 320
Query: 293 ENIENLLGKMK----EDG-------FEPNVYTWN--------------AMQLFSEMLSLD 327
L G K ED E NV WN A++LF ++
Sbjct: 321 SETSILAGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDS 380
Query: 328 LTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGY------DSDVHIGTALVDMYAKCG 381
+ P YT G +L+AC ++A ++ G+Q H + ++ G+ +SDV +G +LVDMY K G
Sbjct: 381 IWPTHYTYGNVLNACGNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTG 440
Query: 382 SLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALS 441
S+ ++R++ D VS NAM+ YA +G K+ + F R+L S PD ++ + LS
Sbjct: 441 SIDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLS 500
Query: 442 ACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDS 500
AC H+G + G F M + + PS HYTCMVDLL RAG L EA E IK +P PDS
Sbjct: 501 ACGHSGLVDEGRRHFHFMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELIKDMPTEPDS 560
Query: 501 VMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKM 560
V+W +LLG C H N+E G+ A RL EL+P N+G YV+L+N++A G+W+D+ R R+ M
Sbjct: 561 VLWASLLGACRLHKNVELGERTAGRLFELDPENSGPYVLLSNMYAEMGKWADVFRVRRSM 620
Query: 561 KDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTII 600
KDR + K PGCSWIE +++ F A D H EI++ +
Sbjct: 621 KDRGVSKQPGCSWIEIGSKMNVFLARDNRHPCRNEIHSTL 660
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 131/420 (31%), Positives = 202/420 (48%), Gaps = 50/420 (11%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC DA++VF MPER+ VSWNS++T C E
Sbjct: 195 MYAKCERPVDARRVFDAMPERNVVSWNSLIT-------------CYE------------- 228
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
QNG EA+ + M A G P+ TLSSV+ ACA L G++ H ++
Sbjct: 229 ----------QNGPVGEALVLFVEMMATGFFPDEVTLSSVMSACAGLAAEREGRQVHAHM 278
Query: 121 TRNGFMSNPFVV-NGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ + + V+ N LVD+Y +CG A IF ++ VS +I+ GY ++ NV +A
Sbjct: 279 VKRDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSVVSETSILAGYAKSANVEDA 338
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
+ +F QM V++ +I+WN +I+ Y N +EA +F L RD I PT +T+G+VL
Sbjct: 339 QVVFSQM----VEKNVIAWNVLIAAYAQNGEEEEAIRLFVQ-LKRDSIWPTHYTYGNVLN 393
Query: 240 ACADMNSLRKGKEIHALAIA------LGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
AC ++ L+ G++ H + G +SD FVG +LV+MY + + F+ +
Sbjct: 394 ACGNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMA 453
Query: 294 NIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ 353
+N+ G+ N +A+ LF ML + PD T+ +LSAC ++ G++
Sbjct: 454 ARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGHSGLVDEGRR 513
Query: 354 -VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST-PDLVSQNAMLTAYAMH 411
H G T +VD+ + G LK A K + T PD V ++L A +H
Sbjct: 514 HFHFMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELIKDMPTEPDSVLWASLLGACRLH 573
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 109/437 (24%), Positives = 192/437 (43%), Gaps = 44/437 (10%)
Query: 117 HGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNV 176
HG + ++ F++N LV Y R G + A ++F ++N S N ++ Y G
Sbjct: 40 HGCVLKSPVAGETFLLNTLVSTYARLGRLREARRVFDGIPLRNTFSYNALLSAYARLGRP 99
Query: 177 AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSM-FRDLLMRDGIEPTSFTFG 235
EAR LF+ + S+N++++ + ++ F + D +++F
Sbjct: 100 DEARALFEAIP----DPDQCSYNAVVAALARHGRGHAGDALRFLAAMHADDFVLNAYSFA 155
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
S L ACA LR G+++H L D +G ALV+MY + + V A+ FD +
Sbjct: 156 SALSACAAEKDLRTGEQVHGLVARSPHADDVHIGTALVDMYAKCERPVDARRVFDAMPER 215
Query: 296 ENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVH 355
+ +E N A+ LF EM++ PD T+ ++SAC+ LA G+QVH
Sbjct: 216 NVVSWNSLITCYEQNGPVGEALVLFVEMMATGFFPDEVTLSSVMSACAGLAAEREGRQVH 275
Query: 356 AYAI-RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQ------------- 401
A+ + R D+ + ALVDMYAKCG AR + + + +VS+
Sbjct: 276 AHMVKRDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSVVSETSILAGYAKSANV 335
Query: 402 ------------------NAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSAC 443
N ++ AYA +G +E I F ++ P H ++ + L+AC
Sbjct: 336 EDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNAC 395
Query: 444 VHAGSIKTGSE----FFDLMAYYDVKPSLKHYT--CMVDLLSRAGELGEAYEFIKKIPMA 497
+ ++ G + +D P + +VD+ + G + + + +++ A
Sbjct: 396 GNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERM-AA 454
Query: 498 PDSVMWGALLGGCVSHG 514
D+V W A++ G +G
Sbjct: 455 RDNVSWNAMIVGYAQNG 471
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 79/209 (37%), Gaps = 41/209 (19%)
Query: 339 LSACSSLATMER-------GKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYK 391
L A S LA + R + H ++ + + LV YA+ G L+ AR +
Sbjct: 17 LRASSPLADLLRSAPSLPGARAAHGCVLKSPVAGETFLLNTLVSTYARLGRLREARRVFD 76
Query: 392 RISTPDLVSQNAMLTAYAMHGHGKEGIAHFR----------------------------- 422
I + S NA+L+AYA G E A F
Sbjct: 77 GIPLRNTFSYNALLSAYARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAGDAL 136
Query: 423 RILASGFRPDHI----SFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLL 478
R LA+ D + SF SALSAC ++TG + L+A + T +VD+
Sbjct: 137 RFLAAMHADDFVLNAYSFASALSACAAEKDLRTGEQVHGLVARSPHADDVHIGTALVDMY 196
Query: 479 SRAGELGEAYEFIKKIPMAPDSVMWGALL 507
++ +A +P + V W +L+
Sbjct: 197 AKCERPVDARRVFDAMP-ERNVVSWNSLI 224
>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 785
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 189/597 (31%), Positives = 304/597 (50%), Gaps = 70/597 (11%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG L A+ +F +S+ ++ ++V
Sbjct: 151 MYAKCGHLYQAQTLF----------------------------------NSISHQDRDIV 176
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+A+I F+ + + I + +MQ G+ PN+ TL S+LP + L GK H Y
Sbjct: 177 AWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYY 236
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
RN F N + L+D+Y +C + A KIF+ + KN+V
Sbjct: 237 IRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVC------------------ 278
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
W++MI GYV + +A +++ D+L G+ PT T ++L A
Sbjct: 279 -----------------WSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRA 321
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA + L++GK++H I G+ DT VG +L+ MY + + A DE+ + +
Sbjct: 322 CAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSY 381
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G N Y A+ +F +M S + P + T+ +L ACS LA ++ G H Y +
Sbjct: 382 SAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHGTCCHGYTVV 441
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
G+ +D I A++DMY+KCG + +R + R+ D++S N M+ Y +HG E ++
Sbjct: 442 RGFTNDTSICNAIIDMYSKCGKITISREIFDRMQNRDIISWNTMIIGYGIHGLCVEALSL 501
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLS 479
F+ + A G +PD ++ ++ LSAC H+G + G +F M+ +++KP + HY CMVDLL+
Sbjct: 502 FQELQALGLKPDDVTLIAVLSACSHSGLVTEGKYWFSSMSQNFNIKPRMAHYICMVDLLA 561
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
RAG L EAY FI+++P P+ +WGALL C +H N+E G+ + ++ L P TGN+V+
Sbjct: 562 RAGNLDEAYTFIQRMPFVPNVRIWGALLAACRTHKNIEMGEQVSKKIQLLGPEGTGNFVL 621
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEI 596
++N+++ GRW D A R + KSPGCSW+E IH F +SH +S I
Sbjct: 622 MSNIYSSVGRWDDAAYIRSIQRHHGYKKSPGCSWVEISGVIHVFIGGHQSHPQSASI 678
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 110/459 (23%), Positives = 213/459 (46%), Gaps = 36/459 (7%)
Query: 57 PNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEF 116
P++V W+ +I + +G +++I + M G+ P T +L AC+ LQ L LG+
Sbjct: 70 PSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLLKACSSLQALQLGRLI 129
Query: 117 HGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNV 176
H + G + +V L+ +Y +CG +
Sbjct: 130 HTHAHILGLSMDLYVSTALLHMYAKCGHLY------------------------------ 159
Query: 177 AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGS 236
+A+ LF+ + H R I++WN+MI+ + ++L+ + + + G+ P S T S
Sbjct: 160 -QAQTLFNSISH--QDRDIVAWNAMIAAFSFHALHAQTIHSVAQ-MQQAGVTPNSSTLVS 215
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
+L N+L +GK IHA I + + AL++MY + L A+ F+ +
Sbjct: 216 ILPTIGQANALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKN 275
Query: 297 NLLGKMKEDGFEPNVYTWNAMQLFSEMLSL-DLTPDIYTVGIILSACSSLATMERGKQVH 355
++ G+ + +A+ L+ +ML + L P T+ +L AC+ L ++RGK++H
Sbjct: 276 DVCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLH 335
Query: 356 AYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGK 415
+ I+ G D D +G +L+ MYAKCG + +A + D VS +A+++ +G+ +
Sbjct: 336 CHMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAE 395
Query: 416 EGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMV 475
+ + FR++ +SG P + ++ L AC H +++ G+ ++
Sbjct: 396 KALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSICNAII 455
Query: 476 DLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
D+ S+ G++ + E ++ D + W ++ G HG
Sbjct: 456 DMYSKCGKITISREIFDRM-QNRDIISWNTMIIGYGIHG 493
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 169/354 (47%), Gaps = 33/354 (9%)
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
AR +FDQ+ + ++ WN MI Y + + ++ ++ +L + G+ PT+FTF +L
Sbjct: 60 ARHVFDQIP----KPSVVLWNMMIRTYAWSGPFQQSIYLYLHML-QLGVTPTNFTFPFLL 114
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
AC+ + +L+ G+ IH A LGL D +V AL+ MY + L AQ F+ I + +
Sbjct: 115 KACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDR- 173
Query: 299 LGKMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSS 344
++ WNAM ++M +TP+ T+ IL
Sbjct: 174 -----------DIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQ 222
Query: 345 LATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAM 404
+ +GK +HAY IR + +V + TAL+DMYAKC L +AR + ++ + V +AM
Sbjct: 223 ANALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAM 282
Query: 405 LTAYAMHGHGKEGIAHFRRILA-SGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYD 463
+ Y +H + +A + +L G P + + L AC +K G + M
Sbjct: 283 IGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSG 342
Query: 464 VKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
+ ++ + ++ G + A F+ ++ +A D+V + A++ GCV +G E
Sbjct: 343 MDLDTTVGNSLISMYAKCGIMDNAVGFLDEM-IAKDTVSYSAIISGCVQNGYAE 395
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 135/298 (45%), Gaps = 25/298 (8%)
Query: 281 DLVAAQMAFDEIENIENLLGKMKEDGF-EPNVYTWNAM--------------QLFSEMLS 325
D A Q+A I E L + D +P+V WN M L+ ML
Sbjct: 41 DAAATQLARYHISRNEIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQ 100
Query: 326 LDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKH 385
L +TP +T +L ACSSL ++ G+ +H +A G D+++ TAL+ MYAKCG L
Sbjct: 101 LGVTPTNFTFPFLLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQ 160
Query: 386 ARLAYKRISTP--DLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSAC 443
A+ + IS D+V+ NAM+ A++ H + I ++ +G P+ + +S L
Sbjct: 161 AQTLFNSISHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTI 220
Query: 444 VHAGSIKTGSEFFDLMAYYDVK---PSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDS 500
A ++ G + AYY ++ T ++D+ ++ L A + + D
Sbjct: 221 GQANALHQGKA---IHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKND- 276
Query: 501 VMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQ 558
V W A++GG V H ++ D ++ + N LA + + +DL R ++
Sbjct: 277 VCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTP-ATLATMLRACAQLTDLKRGKK 333
>gi|224065851|ref|XP_002301973.1| predicted protein [Populus trichocarpa]
gi|222843699|gb|EEE81246.1| predicted protein [Populus trichocarpa]
Length = 716
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 193/571 (33%), Positives = 308/571 (53%), Gaps = 35/571 (6%)
Query: 60 VSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
+S I F++ + I + M +G+ P++R L +V+ CA L L GK+ H +
Sbjct: 40 ISLPETIQIFSKLNHFGHVIRVFSYMLTQGIVPDSRVLPTVIKTCAALSALQTGKQMHCF 99
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+G + V++ L+ +Y + + A +F K V+ + +I + G V E
Sbjct: 100 ALVSGLGLDSVVLSSLLHMYVQFDHLKDARNVFDKLPQPGVVTSSALISRFARKGRVKET 159
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
+ELF Q LGV+ ++SWN MISG+ + Y +A MF+++ + +G++P + SVL
Sbjct: 160 KELFYQTRDLGVELNLVSWNGMISGFNRSGSYLDAVLMFQNMHL-EGLKPDGTSVSSVLP 218
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE--- 296
A D++ G +IH I GL D FV AL++MY + F+E++ ++
Sbjct: 219 AVGDLDMPLMGIQIHCYVIKQGLGPDKFVVSALIDMYGKCACASEMSGVFNEMDEVDVGA 278
Query: 297 ---------------NLLGKMKE-DGFEPNVYTWNAM--------------QLFSEMLSL 326
N L K+ G + NV +W +M +LF EM
Sbjct: 279 CNALVTGLSRNGLVDNALEVFKQFKGMDLNVVSWTSMIASCSQNGKDMEALELFREMQIE 338
Query: 327 DLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHA 386
+ P+ T+ +L AC ++A + GK H +++R G +DV++G+AL+DMYAKCG + +
Sbjct: 339 GVKPNSVTIPCLLPACGNIAALLHGKAAHCFSLRNGIFNDVYVGSALIDMYAKCGRMLAS 398
Query: 387 RLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHA 446
RL + + +LVS N+++ YAMHG E I F + G +PDH+SF LSAC
Sbjct: 399 RLCFDMMPNRNLVSWNSLMAGYAMHGKTFEAINIFELMQRCGQKPDHVSFTCVLSACTQG 458
Query: 447 GSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGA 505
G + G +FD M+ + V+ ++HY+CMV LL R+G L EAY IK++P PDS +WGA
Sbjct: 459 GLTEEGWFYFDSMSRNHGVEARMEHYSCMVTLLGRSGRLEEAYAMIKQMPFEPDSCVWGA 518
Query: 506 LLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRM 565
LL C H ++ G+IAA R+ ELEP N GNY++L+N++A W ++ R M+ R +
Sbjct: 519 LLSSCRVHNRVDLGEIAAKRVFELEPRNPGNYILLSNIYASKAMWVEVDMVRDMMRSRGL 578
Query: 566 HKSPGCSWIEDRDEIHKFRASDRSHDRSEEI 596
K+PG SWIE ++++H A D SH + +I
Sbjct: 579 KKNPGYSWIEIKNKVHMLLAGDSSHPQMPQI 609
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 121/427 (28%), Positives = 216/427 (50%), Gaps = 6/427 (1%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY + L DA+ VF +P+ V+ +++++ A G V E E + L E NLV
Sbjct: 118 MYVQFDHLKDARNVFDKLPQPGVVTSSALISRFARKGRVKETKELFYQTRDLGVEL-NLV 176
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ +I GF ++G +A+ M M EGL+P+ ++SSVLPA L +G + H Y+
Sbjct: 177 SWNGMISGFNRSGSYLDAVLMFQNMHLEGLKPDGTSVSSVLPAVGDLDMPLMGIQIHCYV 236
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G + FVV+ L+D+Y +C +F++ + +CN ++ G NG V A
Sbjct: 237 IKQGLGPDKFVVSALIDMYGKCACASEMSGVFNEMDEVDVGACNALVTGLSRNGLVDNAL 296
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
E+F Q + G+ ++SW SMI+ N EA +FR++ + +G++P S T +L A
Sbjct: 297 EVFKQFK--GMDLNVVSWTSMIASCSQNGKDMEALELFREMQI-EGVKPNSVTIPCLLPA 353
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C ++ +L GK H ++ G+ +D +VG AL++MY + ++A+++ FD + N +
Sbjct: 354 CGNIAALLHGKAAHCFSLRNGIFNDVYVGSALIDMYAKCGRMLASRLCFDMMPNRNLVSW 413
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGK-QVHAYAI 359
G+ + T+ A+ +F M PD + +LSAC+ E G + +
Sbjct: 414 NSLMAGYAMHGKTFEAINIFELMQRCGQKPDHVSFTCVLSACTQGGLTEEGWFYFDSMSR 473
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNAMLTAYAMHGHGKEGI 418
G ++ + + +V + + G L+ A K++ PD A+L++ +H G
Sbjct: 474 NHGVEARMEHYSCMVTLLGRSGRLEEAYAMIKQMPFEPDSCVWGALLSSCRVHNRVDLGE 533
Query: 419 AHFRRIL 425
+R+
Sbjct: 534 IAAKRVF 540
>gi|359475162|ref|XP_003631603.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g18840-like [Vitis vinifera]
Length = 670
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 199/636 (31%), Positives = 339/636 (53%), Gaps = 45/636 (7%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y K G L +A K+F MPER+ +WN+++ A + +A E + S D LV
Sbjct: 32 LYSKHGFLAEAHKLFDEMPERNVFTWNAIIWAYIKTQNLKQARELFDSAPSKD-----LV 86
Query: 61 SWSAVIGGFTQ-NGYDEEAIGMLFRMQAEGLEP--NARTLSSVLPACARLQKLSLGKEFH 117
++++++ G+ +GY+ A+ + MQ+ E + +L+ +L A+L S GK+ H
Sbjct: 87 TYNSMLSGYINTDGYETNALKLFIEMQSLNDETRIDEFSLTRMLNLSAKLSMESYGKQLH 146
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFS-IKNEVSCNTIIVGYCENGNV 176
Y+ + + F V+ L+D+Y +CG ++F + + + VS N ++ C G +
Sbjct: 147 SYMVKTANNISGFAVSSLIDMYSKCGCFREVCQVFDGCAGVLDLVSKNAMVAACCREGEL 206
Query: 177 AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGS 236
LF + L ++SWN++ISGYV N ++A +F + + + T
Sbjct: 207 EMGVNLFWRDLELN---DVVSWNTLISGYVQNGCEEDALKLFVHM-EENEVRWNEHTIAG 262
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCR-----YQDLVAAQMAFDE 291
+L ACA + SL+ GKE+H + L + F+ LV++YC+ Y +LV A +
Sbjct: 263 LLSACAGLRSLKLGKEVHGWVLKYELGFNPFISSGLVDVYCKCGNMKYAELVYATIGTGN 322
Query: 292 IENIENLL------GKMKE-----DGF-EPNVYTWNAM--------------QLFSEM-L 324
+I +++ G M E D E + W A+ +L SE +
Sbjct: 323 AFSITSMIVGHSSQGNMGEARRLFDSLTEKSSIIWTALFTGYVKSQQCEAVFELLSEFRV 382
Query: 325 SLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLK 384
+ PD + +L AC+ A + GKQ+HAY +R G + D + +A+VDMY+K G++K
Sbjct: 383 KEAMVPDALILISVLGACAIQAALNPGKQIHAYVLRIGIELDEKLVSAMVDMYSKSGNIK 442
Query: 385 HARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACV 444
+A ++R++ D V N M YA HGH + I F +L G RPD ++F++ LSAC
Sbjct: 443 YAEKIFQRVTNRDAVIYNIMTAGYAHHGHENQAIQQFEEMLERGVRPDAVTFVALLSACR 502
Query: 445 HAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWG 504
H G ++ G ++F M Y++ P + HY CM+DL RA +L +A F+K+IP+ PD+V+ G
Sbjct: 503 HCGLVELGEKYFASMTDYNILPEIDHYACMIDLYGRANQLEKAVAFMKRIPIEPDAVILG 562
Query: 505 ALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRR 564
A L C + N + + A ++++ +E +N YV LAN++A G+W ++ R R+KM++
Sbjct: 563 AFLNACRINRNTKLAREAEEKILRIEGDNGARYVQLANVYAAEGKWVEMGRIRRKMRENE 622
Query: 565 MHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTII 600
+ K GCSW+ + +H F + D SH +E IY+I+
Sbjct: 623 IKKFAGCSWVYVENRVHIFTSGDSSHSSAEAIYSIL 658
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 111/476 (23%), Positives = 209/476 (43%), Gaps = 72/476 (15%)
Query: 107 LQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTI 166
++ + G FH + +NG S F N L+ +Y + G + A K+F + +N + N I
Sbjct: 1 MRSIKDGFRFHAHAIKNGITSTVFTSNQLIHLYSKHGFLAEAHKLFDEMPERNVFTWNAI 60
Query: 167 IVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYD-EAFSMFRDLL-MR 224
I Y + N+ +ARELFD + ++++NSM+SGY++ Y+ A +F ++ +
Sbjct: 61 IWAYIKTQNLKQARELFDS----APSKDLVTYNSMLSGYINTDGYETNALKLFIEMQSLN 116
Query: 225 DGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVA 284
D F+ +L A ++ GK++H+ + F +L++MY +
Sbjct: 117 DETRIDEFSLTRMLNLSAKLSMESYGKQLHSYMVKTANNISGFAVSSLIDMYSKCGCFRE 176
Query: 285 AQMAFDEIENIENLLGK-------MKEDGFE------------PNVYTWN---------- 315
FD + +L+ K +E E +V +WN
Sbjct: 177 VCQVFDGCAGVLDLVSKNAMVAACCREGELEMGVNLFWRDLELNDVVSWNTLISGYVQNG 236
Query: 316 ----AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGT 371
A++LF M ++ + +T+ +LSAC+ L +++ GK+VH + ++ + I +
Sbjct: 237 CEEDALKLFVHMEENEVRWNEHTIAGLLSACAGLRSLKLGKEVHGWVLKYELGFNPFISS 296
Query: 372 ALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRI------- 424
LVD+Y KCG++K+A L Y I T + S +M+ ++ G+ E F +
Sbjct: 297 GLVDVYCKCGNMKYAELVYATIGTGNAFSITSMIVGHSSQGNMGEARRLFDSLTEKSSII 356
Query: 425 -------------------LASGFR------PDHISFLSALSACVHAGSIKTGSEFFDLM 459
L S FR PD + +S L AC ++ G + +
Sbjct: 357 WTALFTGYVKSQQCEAVFELLSEFRVKEAMVPDALILISVLGACAIQAALNPGKQIHAYV 416
Query: 460 AYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
++ K + MVD+ S++G + A + +++ D+V++ + G HG+
Sbjct: 417 LRIGIELDEKLVSAMVDMYSKSGNIKYAEKIFQRVT-NRDAVIYNIMTAGYAHHGH 471
>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 738
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 189/547 (34%), Positives = 306/547 (55%), Gaps = 8/547 (1%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
N+ W+++I G++ + ++ + RM G++PN+ T + +C + + GK+ H
Sbjct: 95 NVFIWNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKATHEGKQLH 154
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
+ + NP V ++ +Y G+M A +F K S+++ VS +I GY G +
Sbjct: 155 AHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQGCLD 214
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
+AR LFD++ + ++SWN+MISGYV + ++EA F ++ + P T V
Sbjct: 215 DARRLFDEIP----VKDVVSWNAMISGYVQSGRFEEAIVCFYEM-QEANVLPNKSTMVVV 269
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
L AC S GK I + G S+ + AL++MYC+ + A+ FD IE +
Sbjct: 270 LSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDV 329
Query: 298 LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAY 357
+ G+ A+ LF ML ++ P+ T IL AC+ L ++ GK VHAY
Sbjct: 330 ISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAY 389
Query: 358 AIR-CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKE 416
+ S+ + T+L+DMYAKCG ++ A ++ + + +L S NAML+ +AMHGH +
Sbjct: 390 IDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAER 449
Query: 417 GIAHFRRILASG-FRPDHISFLSALSACVHAGSIKTGSEFF-DLMAYYDVKPSLKHYTCM 474
+A F ++ G FRPD I+F+ LSAC AG + G ++F ++ Y + P L+HY CM
Sbjct: 450 ALALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGISPKLQHYGCM 509
Query: 475 VDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNT 534
+DLL+RA + EA +K + M PD +WG+LL C +HG +EFG+ A+RL +LEP N
Sbjct: 510 IDLLARAEKFEEAEILMKNMEMEPDGAIWGSLLSACKAHGRVEFGEYVAERLFQLEPENA 569
Query: 535 GNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSE 594
G +V+L+N++A AGRW D+AR R ++ D+ M K PGC+ IE ++H+F D+ H
Sbjct: 570 GAFVLLSNIYAGAGRWDDVARIRTRLNDKGMKKVPGCTSIEIDGDVHEFLVGDKFHPECN 629
Query: 595 EIYTIID 601
IY +++
Sbjct: 630 NIYKMLN 636
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 120/418 (28%), Positives = 197/418 (47%), Gaps = 49/418 (11%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETP--N 58
MY G +D A+ VF RD VS+ +++T + G CL+ L +E P +
Sbjct: 175 MYASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQG-------CLDDARRLFDEIPVKD 227
Query: 59 LVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHG 118
+VSW+A+I G+ Q+G EEAI + MQ + PN T+ VL AC + LGK
Sbjct: 228 VVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGKWIGS 287
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
++ NGF SN + N L+D+Y +CG+ A ++F K+ +S NT+I GY
Sbjct: 288 WVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVISWNTMIGGY-------- 339
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
Y+ SLY+EA ++F ++++R ++P TF +L
Sbjct: 340 -------------------------SYL--SLYEEALALF-EVMLRSNVKPNDVTFLGIL 371
Query: 239 IACADMNSLRKGKEIHA-LAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
ACA + +L GK +HA + L S+ + +L++MY + + AA+ F + +
Sbjct: 372 HACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNL 431
Query: 298 LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDL-TPDIYTVGIILSACSSLATMERGKQVHA 356
GF + + A+ LFSEM++ L PD T +LSAC+ ++ G Q
Sbjct: 432 ASWNAMLSGFAMHGHAERALALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFR 491
Query: 357 YAIR-CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNAMLTAYAMHG 412
I+ G + ++D+ A+ + A + K + PD ++L+A HG
Sbjct: 492 SMIQDYGISPKLQHYGCMIDLLARAEKFEEAEILMKNMEMEPDGAIWGSLLSACKAHG 549
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 106/425 (24%), Positives = 200/425 (47%), Gaps = 51/425 (12%)
Query: 136 VDVYRRCGDMLSALKIFS---KFSIKNEVSCNTIIVGYC---ENGNVAEARELFD--QME 187
+++ +C ++ + +I S K + N V + ++ +C +G+++ A LF+ Q
Sbjct: 32 LNLLEKCKNINTFKQIHSLIIKTGLNNTVFVQSKLIHFCAVSPSGDLSYALSLFEENQQH 91
Query: 188 HLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSL 247
H + + WNS+I GY +S + +F +L G++P S TF + +C +
Sbjct: 92 H---KHNVFIWNSLIRGYSLSSSPLSSLHLFSRMLYY-GVQPNSHTFPFLFKSCTKAKAT 147
Query: 248 RKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDE------IENIENLLGK 301
+GK++HA A+ L L + V +++ MY ++ A++ FD+ + + G
Sbjct: 148 HEGKQLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGY 207
Query: 302 MKEDGFE-----------PNVYTWNAM--------------QLFSEMLSLDLTPDIYTVG 336
+ + + +V +WNAM F EM ++ P+ T+
Sbjct: 208 VSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMV 267
Query: 337 IILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTP 396
++LSAC + E GK + ++ G+ S++ + AL+DMY KCG AR + I
Sbjct: 268 VVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEK 327
Query: 397 DLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFF 456
D++S N M+ Y+ +E +A F +L S +P+ ++FL L AC G++ G
Sbjct: 328 DVISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKW-- 385
Query: 457 DLMAYYDVK----PSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVS 512
+ AY D + +T ++D+ ++ G + EA E + + + + W A+L G
Sbjct: 386 -VHAYIDKNLRNSSNASLWTSLIDMYAKCGCI-EAAERVFRSMHSRNLASWNAMLSGFAM 443
Query: 513 HGNLE 517
HG+ E
Sbjct: 444 HGHAE 448
>gi|242075862|ref|XP_002447867.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
gi|241939050|gb|EES12195.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
Length = 688
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 213/640 (33%), Positives = 327/640 (51%), Gaps = 82/640 (12%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y + G L DA++VF +P R+ S+N++++A A G EA E + P+ S
Sbjct: 62 YARLGRLRDARRVFDEIPLRNTFSYNALLSAYARLGRPDEARALFEAIPD-----PDQCS 116
Query: 62 WSAVIGGFTQN--GYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
++AV+ ++ G+ +A+ L M A+ NA + +S L ACA + G++ HG
Sbjct: 117 YNAVVAALARHGRGHAADALRFLAAMHADDFVLNAYSFASALSACAAEKDSRTGEQVHGL 176
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ R+ + + + LVD+Y +C A ++F +N VS N++I Y +NG V EA
Sbjct: 177 VARSPHADDVHIRSALVDMYAKCERPEDARRVFDAMPERNVVSWNSLITCYEQNGPVGEA 236
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
LF +M M G P T SV+
Sbjct: 237 LMLFVEM------------------------------------MAAGFSPDEVTLSSVMS 260
Query: 240 ACADMNSLRKGKEIHALAIALG-LQSDTFVGGALVEMYCRYQDLVAAQMAFDE------I 292
ACA + + R+G+++HA + L+ D + ALV+MY + A+ FD +
Sbjct: 261 ACAGLAADREGRQVHAHMVKCDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSIV 320
Query: 293 ENIENLLGKMK----EDG-------FEPNVYTWN--------------AMQLFSEMLSLD 327
L G K ED E NV WN A++LF ++
Sbjct: 321 SETSILTGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDS 380
Query: 328 LTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGY------DSDVHIGTALVDMYAKCG 381
+ P YT G +L+AC ++A ++ G+Q H + ++ G+ +SDV +G +LVDMY K G
Sbjct: 381 IWPTHYTYGNVLNACGNIADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTG 440
Query: 382 SLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALS 441
S+ ++R++ D VS NAM+ YA +G K+ + F R+L S PD ++ + LS
Sbjct: 441 SIDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLS 500
Query: 442 ACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDS 500
AC H+G + G +F M + + PS HYTCMVDLL RAG L EA E I +PM PDS
Sbjct: 501 ACGHSGLVDEGRRYFHSMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELINDMPMEPDS 560
Query: 501 VMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKM 560
V+W +LLG C H N+E G+ A RL EL+P N+G YV+L+N++A G+W+++ R R+ M
Sbjct: 561 VLWASLLGACRLHKNVELGEWTAGRLFELDPQNSGPYVLLSNMYAEMGKWAEVFRVRRSM 620
Query: 561 KDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTII 600
KDR + K PGCSWIE +++ F A D+ H EI+ +
Sbjct: 621 KDRGVSKQPGCSWIEIGRKMNVFLARDKRHPCRNEIHNTL 660
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 132/421 (31%), Positives = 202/421 (47%), Gaps = 52/421 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC +DA++VF MPER+ VSWNS++T NG V EAL
Sbjct: 195 MYAKCERPEDARRVFDAMPERNVVSWNSLITCYEQNGPVGEAL----------------- 237
Query: 61 SWSAVIGGFTQNGYDEEAIGMLF-RMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
MLF M A G P+ TLSSV+ ACA L G++ H +
Sbjct: 238 --------------------MLFVEMMAAGFSPDEVTLSSVMSACAGLAADREGRQVHAH 277
Query: 120 ITRNGFMSNPFVV-NGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
+ + + + V+ N LVD+Y +CG A IF ++ VS +I+ GY ++ NV +
Sbjct: 278 MVKCDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSIVSETSILTGYAKSANVED 337
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
A+ +F QM V++ +I+WN +I+ Y N +EA +F L RD I PT +T+G+VL
Sbjct: 338 AQVVFSQM----VEKNVIAWNVLIAAYAQNGEEEEAIRLFVQ-LKRDSIWPTHYTYGNVL 392
Query: 239 IACADMNSLRKGKEIHALAIA------LGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI 292
AC ++ L+ G++ H + G +SD FVG +LV+MY + + F+ +
Sbjct: 393 NACGNIADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERM 452
Query: 293 ENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGK 352
+N+ G+ N +A+ LF ML + PD T+ +LSAC ++ G+
Sbjct: 453 AARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGHSGLVDEGR 512
Query: 353 Q-VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHA-RLAYKRISTPDLVSQNAMLTAYAM 410
+ H+ G T +VD+ + G LK A L PD V ++L A +
Sbjct: 513 RYFHSMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELINDMPMEPDSVLWASLLGACRL 572
Query: 411 H 411
H
Sbjct: 573 H 573
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/445 (24%), Positives = 196/445 (44%), Gaps = 44/445 (9%)
Query: 109 KLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIV 168
LS + H I ++ F++N LV Y R G + A ++F + ++N S N ++
Sbjct: 32 NLSGARAAHARILKSPVAGETFLLNTLVSTYARLGRLRDARRVFDEIPLRNTFSYNALLS 91
Query: 169 GYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSM-FRDLLMRDGI 227
Y G EAR LF+ + S+N++++ + A ++ F + D
Sbjct: 92 AYARLGRPDEARALFEAIP----DPDQCSYNAVVAALARHGRGHAADALRFLAAMHADDF 147
Query: 228 EPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQM 287
+++F S L ACA R G+++H L D + ALV+MY + + A+
Sbjct: 148 VLNAYSFASALSACAAEKDSRTGEQVHGLVARSPHADDVHIRSALVDMYAKCERPEDARR 207
Query: 288 AFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLAT 347
FD + + +E N A+ LF EM++ +PD T+ ++SAC+ LA
Sbjct: 208 VFDAMPERNVVSWNSLITCYEQNGPVGEALMLFVEMMAAGFSPDEVTLSSVMSACAGLAA 267
Query: 348 MERGKQVHAYAIRCG-YDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLT 406
G+QVHA+ ++C D+ + ALVDMYAKCG AR + + + +VS+ ++LT
Sbjct: 268 DREGRQVHAHMVKCDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSIVSETSILT 327
Query: 407 -------------------------------AYAMHGHGKEGIAHFRRILASGFRPDHIS 435
AYA +G +E I F ++ P H +
Sbjct: 328 GYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYT 387
Query: 436 FLSALSACVHAGSIKTGSE----FFDLMAYYDVKPSLKHY--TCMVDLLSRAGELGEAYE 489
+ + L+AC + ++ G + +D P + +VD+ + G + + +
Sbjct: 388 YGNVLNACGNIADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAK 447
Query: 490 FIKKIPMAPDSVMWGALLGGCVSHG 514
+++ A D+V W A++ G +G
Sbjct: 448 VFERMA-ARDNVSWNAMIVGYAQNG 471
>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
Length = 877
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 202/586 (34%), Positives = 319/586 (54%), Gaps = 42/586 (7%)
Query: 14 VFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNG 73
V +M ++D + N++V G V A E+M D +VSW+A+I G NG
Sbjct: 228 VVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSD-----VVSWNALISGCVLNG 282
Query: 74 YDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVN 133
+D AI +L +M+ GL PN TLSS+L AC+ LG++ HG++ + S+ ++
Sbjct: 283 HDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGV 342
Query: 134 GLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQR 193
GLVD+Y + N + +AR++FD M H R
Sbjct: 343 GLVDMYAK-------------------------------NHFLDDARKVFDWMFH----R 367
Query: 194 GIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEI 253
+I N++ISG +DEA S+F +L ++G+ T +VL + A + + +++
Sbjct: 368 DLILCNALISGCSHGGRHDEALSLFYEL-RKEGLGVNRTTLAAVLKSTASLEAASTTRQV 426
Query: 254 HALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYT 313
HALA+ +G D V L++ Y + L A F+E + + + +
Sbjct: 427 HALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHG 486
Query: 314 WNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTAL 373
A++LF EML L PD + + +L+AC+SL+ E+GKQVHA+ I+ + SD G AL
Sbjct: 487 EGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNAL 546
Query: 374 VDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDH 433
V YAKCGS++ A LA+ + +VS +AM+ A HGHGK + F R++ G P+H
Sbjct: 547 VYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNH 606
Query: 434 ISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIK 492
I+ S L AC HAG + +F+ M + + + +HY+CM+DLL RAG+L +A E +
Sbjct: 607 ITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVN 666
Query: 493 KIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSD 552
+P ++ +WGALLG H + E G++AA++L LEP +G +V+LAN +A AG W++
Sbjct: 667 SMPFQANASIWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMWNE 726
Query: 553 LARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYT 598
+A+ R+ MKD + K P SWIE +D++H F D+SH ++EIY
Sbjct: 727 VAKVRKLMKDSNIKKEPAMSWIEVKDKVHTFIVGDKSHPMTKEIYA 772
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 113/410 (27%), Positives = 188/410 (45%), Gaps = 49/410 (11%)
Query: 57 PNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEF 116
P VSWS+++ ++ NG AI M+AEG+ N L VL + LG +
Sbjct: 66 PCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKC---VPDARLGAQV 122
Query: 117 HGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNV 176
H GF S+ FV N LV +Y G M
Sbjct: 123 HAMAMATGFGSDVFVANALVAMYGGFGFM------------------------------- 151
Query: 177 AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGS 236
+AR +F++ + +R +SWN ++S YV N +A +F +++ GI+PT F F
Sbjct: 152 DDARRVFNEADS---ERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVW-SGIQPTEFGFSC 207
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
V+ AC ++ G+++HA+ + +G D F ALV+MY + + A + F+++ + +
Sbjct: 208 VVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSD 267
Query: 297 NLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHA 356
+ G N + A++L +M L P+++T+ IL ACS + G+Q+H
Sbjct: 268 VVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHG 327
Query: 357 YAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKE 416
+ I+ DSD +IG LVDMYAK L AR + + DL+ NA+++ + G E
Sbjct: 328 FMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDE 387
Query: 417 GIAHFRRILASGFRPDHISFLSALSAC-----------VHAGSIKTGSEF 455
++ F + G + + + L + VHA ++K G F
Sbjct: 388 ALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIF 437
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 113/399 (28%), Positives = 182/399 (45%), Gaps = 18/399 (4%)
Query: 164 NTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLM 223
N +I Y + AR FD++ +SW+S+++ Y +N L A F +
Sbjct: 41 NHLISFYSKCRRPCCARRFFDEIP----DPCHVSWSSLVTAYSNNGLPRSAIQAFHGM-R 95
Query: 224 RDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLV 283
+G+ F VL D R G ++HA+A+A G SD FV ALV MY + +
Sbjct: 96 AEGVCCNEFALPVVLKCVPDA---RLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMD 152
Query: 284 AAQMAFDEIENIENLL---GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILS 340
A+ F+E ++ N + G M + N +A+Q+F EM+ + P + +++
Sbjct: 153 DARRVFNEADSERNAVSWNGLMS--AYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVN 210
Query: 341 ACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVS 400
AC+ +E G+QVHA +R GYD DV ALVDMY K G + A + ++++ D+VS
Sbjct: 211 ACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVS 270
Query: 401 QNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA 460
NA+++ ++GH I ++ SG P+ + S L AC AG+ G + M
Sbjct: 271 WNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMI 330
Query: 461 YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQ 520
+ +VD+ ++ L +A + + D ++ AL+ GC SHG
Sbjct: 331 KANADSDDYIGVGLVDMYAKNHFLDDARKVFDWM-FHRDLILCNALISGC-SHGGRH--D 386
Query: 521 IAADRLIELEPNNTG-NYVMLANLFAYAGRWSDLARTRQ 558
A EL G N LA + + TRQ
Sbjct: 387 EALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQ 425
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 112/453 (24%), Positives = 188/453 (41%), Gaps = 104/453 (22%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G +D A +F+ MP+ D VSWN++++ C NG
Sbjct: 246 MYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNG----------------------- 282
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+D AI +L +M+ GL PN TLSS+L AC+ LG++ HG++
Sbjct: 283 -------------HDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFM 329
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ S+ ++ GLVD+Y + + A K+F ++ + CN +I G G EA
Sbjct: 330 IKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEAL 389
Query: 181 ELFDQM--EHLGVQR-----------------------------GIISWNSMISGYVD-- 207
LF ++ E LGV R G I +++G +D
Sbjct: 390 SLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSY 449
Query: 208 ---------NSLYDE------------------------AFSMFRDLLMRDGIEPTSFTF 234
N +++E A +F ++L R G+EP F
Sbjct: 450 WKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEML-RKGLEPDPFVL 508
Query: 235 GSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIEN 294
S+L ACA +++ +GK++HA I SD F G ALV Y + + A++AF +
Sbjct: 509 SSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPE 568
Query: 295 IENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ- 353
+ G + + A++LF M+ + P+ T+ +L AC+ ++ K+
Sbjct: 569 RGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRY 628
Query: 354 VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHA 386
++ G D + ++D+ + G L A
Sbjct: 629 FNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDA 661
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 127/284 (44%), Gaps = 7/284 (2%)
Query: 233 TFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI 292
T L A +L G +HA + G S L+ Y + + A+ FDEI
Sbjct: 6 TISQQLTRYAAAQALLPGAHLHASLLKSG--SLASFRNHLISFYSKCRRPCCARRFFDEI 63
Query: 293 ENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGK 352
+ ++ + N +A+Q F M + + + + + ++L C A + G
Sbjct: 64 PDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLK-CVPDARL--GA 120
Query: 353 QVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRI-STPDLVSQNAMLTAYAMH 411
QVHA A+ G+ SDV + ALV MY G + AR + S + VS N +++AY +
Sbjct: 121 QVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKN 180
Query: 412 GHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHY 471
+ I F ++ SG +P F ++AC + +I+ G + ++ +
Sbjct: 181 DQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTA 240
Query: 472 TCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
+VD+ + G + A +K+P + D V W AL+ GCV +G+
Sbjct: 241 NALVDMYMKMGRVDIASVIFEKMPDS-DVVSWNALISGCVLNGH 283
>gi|359488315|ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Vitis vinifera]
Length = 877
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 194/602 (32%), Positives = 317/602 (52%), Gaps = 73/602 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC +L DA+K+F +P NL
Sbjct: 319 MYMKCNNLSDAQKLFNSLPNH------------------------------------NLQ 342
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
S++A+I G+ ++ EA+GM +Q GL + +LS ACA ++ G + HG
Sbjct: 343 SYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLS 402
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
++ SN V N ++D+Y +CG ++ A +F +
Sbjct: 403 MKSLCQSNICVANAILDMYGKCGALVEACLVFEEM------------------------- 437
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
V R +SWN++I+ + N ++ S+F +++ G+EP FT+GSVL A
Sbjct: 438 ----------VSRDAVSWNAIIAAHEQNGNEEKTLSLFV-WMLQSGMEPDEFTYGSVLKA 486
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA +L G EIH I L D+FVG AL++MY + + A+ D + +
Sbjct: 487 CAGWQALNCGMEIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSW 546
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
GF + A + FS+ML + + PD +T IL C++L T+E GKQ+HA I+
Sbjct: 547 NAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIK 606
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
SD +I + LVDMY+KCG+++ +L +++ D V+ NAM+ YA HG G+E +
Sbjct: 607 KELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKI 666
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFF-DLMAYYDVKPSLKHYTCMVDLLS 479
F + +P+H +FL+ L AC H G ++ G +F +++ Y + P L+HY+C+VD++
Sbjct: 667 FEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMG 726
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
R+G++ +A E I+ +P D+V+W LL C HGN+E + AA +++LEP ++ YV+
Sbjct: 727 RSGQVSKALELIEGMPFEADAVIWRTLLSICKIHGNVEVAEKAAYSILQLEPEDSAAYVL 786
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTI 599
L+N++A AG W+++ + R+ M+ + K PGCSWIE + E+H F D++H RS+EIY
Sbjct: 787 LSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEIKSEVHAFLVGDKAHPRSKEIYEN 846
Query: 600 ID 601
+D
Sbjct: 847 LD 848
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 142/543 (26%), Positives = 253/543 (46%), Gaps = 60/543 (11%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC L+ A KVF MP+RD VSWN+++ A G + A + + M D +V
Sbjct: 86 MYIKCSDLEFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERD-----VV 140
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+++I G+ NG + I + +M G + T + VL +C+ L+ G + HG
Sbjct: 141 SWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLA 200
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ GF + + L+D+Y +C + +++ F KN VS + II G +N ++
Sbjct: 201 VKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGL 260
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
ELF +M+ GV G+ + TF SV +
Sbjct: 261 ELFKEMQKAGV----------------------------------GVSQS--TFASVFRS 284
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL-- 298
CA +++LR G ++H A+ +D +G A ++MY + +L AQ F+ + N NL
Sbjct: 285 CAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPN-HNLQS 343
Query: 299 -----LGKMKED-GFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGK 352
+G + D G E A+ +F + L D ++ AC+ + G
Sbjct: 344 YNAIIVGYARSDKGIE-------ALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEGL 396
Query: 353 QVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHG 412
QVH +++ S++ + A++DMY KCG+L A L ++ + + D VS NA++ A+ +G
Sbjct: 397 QVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNG 456
Query: 413 HGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYT 472
+ ++ ++ F +L SG PD ++ S L AC ++ G E + + +
Sbjct: 457 NEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSFVGI 516
Query: 473 CMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIEL--E 530
++D+ S+ G + +A + ++ V W A++ G E Q +++E+ +
Sbjct: 517 ALIDMYSKCGMMEKAEKLHDRLA-EQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVD 575
Query: 531 PNN 533
P+N
Sbjct: 576 PDN 578
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 118/423 (27%), Positives = 201/423 (47%), Gaps = 6/423 (1%)
Query: 95 RTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSK 154
+T S + C+ + L GK+ H + F FV N L+ +Y +C D+ A K+F
Sbjct: 43 KTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDG 102
Query: 155 FSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEA 214
++ VS N ++ GY G++ A++LFD M +R ++SWNS+ISGY+ N + +
Sbjct: 103 MPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMP----ERDVVSWNSLISGYLHNGDHRKV 158
Query: 215 FSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVE 274
+F + R G TF VL +C+ + G +IH LA+ +G D G AL++
Sbjct: 159 IDVFLQM-GRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLD 217
Query: 275 MYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYT 334
MY + + L + F + + G N ++LF EM + T
Sbjct: 218 MYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQST 277
Query: 335 VGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS 394
+ +C+ L+ + G Q+H +A++ + +DV IGTA +DMY KC +L A+ + +
Sbjct: 278 FASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLP 337
Query: 395 TPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSE 454
+L S NA++ YA G E + FR + SG D +S A AC G +
Sbjct: 338 NHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEGLQ 397
Query: 455 FFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
L + ++ ++D+ + G L EA +++ ++ D+V W A++ +G
Sbjct: 398 VHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEM-VSRDAVSWNAIIAAHEQNG 456
Query: 515 NLE 517
N E
Sbjct: 457 NEE 459
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 89/221 (40%), Gaps = 40/221 (18%)
Query: 334 TVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRI 393
T I CS + GKQ HA I + V + L+ MY KC L+ A + +
Sbjct: 44 TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGM 103
Query: 394 STPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGS----- 448
D VS NAML YA G G G+A +++ + D +S+ S +S +H G
Sbjct: 104 PQRDTVSWNAMLFGYA--GRGDIGVA--QKLFDAMPERDVVSWNSLISGYLHNGDHRKVI 159
Query: 449 ---IKTG--SEFFDLMAYYDVKPSLKH------------------YTC-------MVDLL 478
++ G FD + V S + C ++D+
Sbjct: 160 DVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMY 219
Query: 479 SRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFG 519
++ +L + +F +P + V W A++ GCV + +L G
Sbjct: 220 AKCKKLDCSIQFFHSMP-EKNWVSWSAIIAGCVQNDDLRGG 259
>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
Length = 877
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 202/586 (34%), Positives = 319/586 (54%), Gaps = 42/586 (7%)
Query: 14 VFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNG 73
V +M ++D + N++V G V A E+M D +VSW+A+I G NG
Sbjct: 228 VVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSD-----VVSWNALISGCVLNG 282
Query: 74 YDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVN 133
+D AI +L +M+ GL PN TLSS+L AC+ LG++ HG++ + S+ ++
Sbjct: 283 HDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGV 342
Query: 134 GLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQR 193
GLVD+Y + N + +AR++FD M H R
Sbjct: 343 GLVDMYAK-------------------------------NHFLDDARKVFDWMFH----R 367
Query: 194 GIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEI 253
+I N++ISG +DEA S+F +L ++G+ T +VL + A + + +++
Sbjct: 368 DLILCNALISGCSHGGRHDEALSLFYEL-RKEGLGVNRTTLAAVLKSTASLEAASTTRQV 426
Query: 254 HALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYT 313
HALA+ +G D V L++ Y + L A F+E + + + +
Sbjct: 427 HALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHG 486
Query: 314 WNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTAL 373
A++LF EML L PD + + +L+AC+SL+ E+GKQVHA+ I+ + SD G AL
Sbjct: 487 EGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNAL 546
Query: 374 VDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDH 433
V YAKCGS++ A LA+ + +VS +AM+ A HGHGK + F R++ G P+H
Sbjct: 547 VYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNH 606
Query: 434 ISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIK 492
I+ S L AC HAG + +F+ M + + + +HY+CM+DLL RAG+L +A E +
Sbjct: 607 ITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVN 666
Query: 493 KIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSD 552
+P ++ +WGALLG H + E G++AA++L LEP +G +V+LAN +A AG W++
Sbjct: 667 SMPFQANASIWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMWNE 726
Query: 553 LARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYT 598
+A+ R+ MKD + K P SWIE +D++H F D+SH ++EIY
Sbjct: 727 VAKVRKLMKDSNIKKEPAMSWIEVKDKVHTFIVGDKSHPMTKEIYA 772
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 113/410 (27%), Positives = 188/410 (45%), Gaps = 49/410 (11%)
Query: 57 PNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEF 116
P VSWS+++ ++ NG AI M+AEG+ N L VL + LG +
Sbjct: 66 PCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKC---VPDARLGAQV 122
Query: 117 HGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNV 176
H GF S+ FV N LV +Y G M
Sbjct: 123 HAMAMATGFGSDVFVANALVAMYGGFGFM------------------------------- 151
Query: 177 AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGS 236
+AR +F++ + +R +SWN ++S YV N +A +F +++ GI+PT F F
Sbjct: 152 DDARRVFNEADS---ERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVW-SGIQPTEFGFSC 207
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
V+ AC ++ G+++HA+ + +G D F ALV+MY + + A + F+++ + +
Sbjct: 208 VVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSD 267
Query: 297 NLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHA 356
+ G N + A++L +M L P+++T+ IL ACS + G+Q+H
Sbjct: 268 VVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHG 327
Query: 357 YAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKE 416
+ I+ DSD +IG LVDMYAK L AR + + DL+ NA+++ + G E
Sbjct: 328 FMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDE 387
Query: 417 GIAHFRRILASGFRPDHISFLSALSAC-----------VHAGSIKTGSEF 455
++ F + G + + + L + VHA ++K G F
Sbjct: 388 ALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIF 437
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 113/399 (28%), Positives = 183/399 (45%), Gaps = 18/399 (4%)
Query: 164 NTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLM 223
N +I Y + AR +FD++ +SW+S+++ Y +N L A F +
Sbjct: 41 NHLISFYSKCRRPCCARRVFDEIP----DPCHVSWSSLVTAYSNNGLPRSAIQAFHGM-R 95
Query: 224 RDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLV 283
+G+ F VL D R G ++HA+A+A G SD FV ALV MY + +
Sbjct: 96 AEGVCCNEFALPVVLKCVPDA---RLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMD 152
Query: 284 AAQMAFDEIENIENLL---GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILS 340
A+ F+E ++ N + G M + N +A+Q+F EM+ + P + +++
Sbjct: 153 DARRVFNEADSERNAVSWNGLMS--AYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVN 210
Query: 341 ACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVS 400
AC+ +E G+QVHA +R GYD DV ALVDMY K G + A + ++++ D+VS
Sbjct: 211 ACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVS 270
Query: 401 QNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA 460
NA+++ ++GH I ++ SG P+ + S L AC AG+ G + M
Sbjct: 271 WNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMI 330
Query: 461 YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQ 520
+ +VD+ ++ L +A + + D ++ AL+ GC SHG
Sbjct: 331 KANADSDDYIGVGLVDMYAKNHFLDDARKVFDWM-FHRDLILCNALISGC-SHGGRH--D 386
Query: 521 IAADRLIELEPNNTG-NYVMLANLFAYAGRWSDLARTRQ 558
A EL G N LA + + TRQ
Sbjct: 387 EALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQ 425
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 112/453 (24%), Positives = 188/453 (41%), Gaps = 104/453 (22%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G +D A +F+ MP+ D VSWN++++ C NG
Sbjct: 246 MYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNG----------------------- 282
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+D AI +L +M+ GL PN TLSS+L AC+ LG++ HG++
Sbjct: 283 -------------HDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFM 329
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ S+ ++ GLVD+Y + + A K+F ++ + CN +I G G EA
Sbjct: 330 IKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEAL 389
Query: 181 ELFDQM--EHLGVQR-----------------------------GIISWNSMISGYVD-- 207
LF ++ E LGV R G I +++G +D
Sbjct: 390 SLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSY 449
Query: 208 ---------NSLYDE------------------------AFSMFRDLLMRDGIEPTSFTF 234
N +++E A +F ++L R G+EP F
Sbjct: 450 WKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEML-RKGLEPDPFVL 508
Query: 235 GSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIEN 294
S+L ACA +++ +GK++HA I SD F G ALV Y + + A++AF +
Sbjct: 509 SSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPE 568
Query: 295 IENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ- 353
+ G + + A++LF M+ + P+ T+ +L AC+ ++ K+
Sbjct: 569 RGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRY 628
Query: 354 VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHA 386
++ G D + ++D+ + G L A
Sbjct: 629 FNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDA 661
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 127/284 (44%), Gaps = 7/284 (2%)
Query: 233 TFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI 292
T L A +L G +HA + G S L+ Y + + A+ FDEI
Sbjct: 6 TISQQLTRYAAAQALLPGAHLHASLLKSG--SLASFRNHLISFYSKCRRPCCARRVFDEI 63
Query: 293 ENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGK 352
+ ++ + N +A+Q F M + + + + + ++L C A + G
Sbjct: 64 PDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLK-CVPDARL--GA 120
Query: 353 QVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRI-STPDLVSQNAMLTAYAMH 411
QVHA A+ G+ SDV + ALV MY G + AR + S + VS N +++AY +
Sbjct: 121 QVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKN 180
Query: 412 GHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHY 471
+ I F ++ SG +P F ++AC + +I+ G + ++ +
Sbjct: 181 DQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTA 240
Query: 472 TCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
+VD+ + G + A +K+P + D V W AL+ GCV +G+
Sbjct: 241 NALVDMYMKMGRVDIASVIFEKMPDS-DVVSWNALISGCVLNGH 283
>gi|147856409|emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
Length = 681
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 198/603 (32%), Positives = 306/603 (50%), Gaps = 74/603 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG LD A K+F MP+R NLV
Sbjct: 49 MYSKCGELDHALKLFDTMPQR------------------------------------NLV 72
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A+I G +QN EAI M+ G P SS + ACA L + +GK+ H
Sbjct: 73 SWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLA 132
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G S FV + L D+Y +CG M A K+F + K+EVS +I GY + G EA
Sbjct: 133 LKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEAL 192
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
F +M DE ++ + +L S L A
Sbjct: 193 LAFKKM------------------------IDEEVTIDQHVLC------------STLGA 216
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C + + + G+ +H+ + LG +SD FVG AL +MY + D+ +A F N++
Sbjct: 217 CGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVS 276
Query: 301 -KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
DG+ + +F E+ + P+ +T ++ AC++ A +E+G Q+HA +
Sbjct: 277 YTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVM 336
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
+ +D D + + LVDMY KCG L+HA A+ I P ++ N++++ + HG GK+ I
Sbjct: 337 KINFDEDPFVSSILVDMYGKCGLLEHAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIK 396
Query: 420 HFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMVDLL 478
F R++ G +P+ I+F+S L+ C HAG ++ G ++F M Y V P +HY+C++DLL
Sbjct: 397 FFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLL 456
Query: 479 SRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYV 538
RAG L EA EFI ++P P++ W + LG C HG+ E G++AA++L++LEP N+G V
Sbjct: 457 GRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALV 516
Query: 539 MLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYT 598
+L+N++A +W D+ R +M+D + K PG SW++ + H F A D SH R IY
Sbjct: 517 LLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFGAEDWSHXRKSAIYE 576
Query: 599 IID 601
+D
Sbjct: 577 KLD 579
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 121/463 (26%), Positives = 218/463 (47%), Gaps = 49/463 (10%)
Query: 93 NARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIF 152
+ L+ V+ A+ ++L GK+ H + G+ F+ N LV++Y +CG++ ALK
Sbjct: 4 DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALK-- 61
Query: 153 SKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYD 212
LFD M QR ++SW +MISG NS +
Sbjct: 62 -----------------------------LFDTMP----QRNLVSWTAMISGLSQNSKFS 88
Query: 213 EAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGAL 272
EA F + + G PT F F S + ACA + S+ GK++H LA+ G+ S+ FVG L
Sbjct: 89 EAIRTFCGMRIC-GEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNL 147
Query: 273 VEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDI 332
+MY + + A F+E+ + + DG+ A+ F +M+ ++T D
Sbjct: 148 EDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQ 207
Query: 333 YTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKR 392
+ + L AC +L + G+ VH+ ++ G++SD+ +G AL DMY+K G ++ A +
Sbjct: 208 HVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGI 267
Query: 393 IS-TPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKT 451
S ++VS ++ Y ++G++ F + G P+ +F S + AC + +++
Sbjct: 268 DSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQ 327
Query: 452 GSEFFD--LMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
G++ + +D P + + +VD+ + G L A + +I P + W +L+
Sbjct: 328 GTQLHAQVMKINFDEDPFVS--SILVDMYGKCGLLEHAIQAFDEIG-DPTEIAWNSLVSV 384
Query: 510 CVSHG----NLEFGQIAADRLIELEPNNTGNYVMLANLFAYAG 548
HG ++F + DR + +PN ++ L ++AG
Sbjct: 385 FGQHGLGKDAIKFFERMVDRGV--KPNAI-TFISLLTGCSHAG 424
>gi|449435936|ref|XP_004135750.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Cucumis sativus]
Length = 762
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 213/667 (31%), Positives = 328/667 (49%), Gaps = 102/667 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWN------------------------------SVV 30
+Y + G L DA+ +F +P++D V WN SV
Sbjct: 102 LYAENGHLSDAQYLFDNIPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVT 161
Query: 31 TACAANGLVLEAL---------------------------------ECLERMSSLDNETP 57
AC + EA+ +CL+ L + +P
Sbjct: 162 FACVLSVCASEAMLDLGTQLHGIAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSP 221
Query: 58 --NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKE 115
+LVSW+ +I G+ QNG EA + M + G++P++ T +S LP L L KE
Sbjct: 222 QSDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKE 281
Query: 116 FHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGN 175
HGYI R+ + + F+ + L+D+Y +C D+ A KI + S + V C T
Sbjct: 282 IHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKILCQSSSFDTVVCTT---------- 331
Query: 176 VAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFG 235
MISGYV N EA FR L+++ ++PTS TF
Sbjct: 332 -------------------------MISGYVLNGKNKEALEAFR-WLVQERMKPTSVTFS 365
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
S+ A A + +L GKE+H I L VG A+++MY + L A F+ I
Sbjct: 366 SIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEK 425
Query: 296 ENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVH 355
+ + N A+ LF +M D ++ LSAC++L + GK++H
Sbjct: 426 DAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEIH 485
Query: 356 AYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGK 415
I+ SD++ ++L+DMYAKCG+L +R + R+ + VS N++++AY HG K
Sbjct: 486 GLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQERNEVSWNSIISAYGNHGDLK 545
Query: 416 EGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCM 474
E +A F +L +G +PDH++FL +SAC HAG + G ++ LM Y + ++HY C+
Sbjct: 546 ECLALFHEMLRNGIQPDHVTFLGIISACGHAGQVDEGIRYYHLMTEEYGIPARMEHYACV 605
Query: 475 VDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNT 534
D+ RAG L EA+E I +P PD+ +WG LLG C HGN+E ++A+ L +L+P N+
Sbjct: 606 ADMFGRAGRLDEAFETINSMPFPPDAGVWGTLLGACHIHGNVELAEVASKHLFDLDPLNS 665
Query: 535 GNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSE 594
G YV+LAN+ A AG+W + + R MK+R + K PG SWIE + H F A+D SH +
Sbjct: 666 GYYVLLANVQAGAGKWRKVLKVRSIMKERGVRKVPGYSWIEVNNATHMFVAADGSHPLTA 725
Query: 595 EIYTIID 601
+IY+++D
Sbjct: 726 QIYSVLD 732
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 114/454 (25%), Positives = 198/454 (43%), Gaps = 37/454 (8%)
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+ +I GFT G A+ +M G+ P+ T V+ AC L+ + +GK H +
Sbjct: 25 AWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYTFPYVVKACCGLKSVKMGKIVHETV 84
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
G + FV + L+ +Y G + A +F K+ V N ++ GY +NG+ A
Sbjct: 85 NLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQKDSVLWNVMLNGYVKNGDSGNAI 144
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
++F +M H I+P S TF VL
Sbjct: 145 KIFLEMRH------------------------------------SEIKPNSVTFACVLSV 168
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA L G ++H +A++ GL+ D+ V L+ MY + Q L AA+ FD + +
Sbjct: 169 CASEAMLDLGTQLHGIAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSW 228
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G+ N A LF M+S + PD T L + L +++ K++H Y IR
Sbjct: 229 NGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIR 288
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
DV + +AL+D+Y KC ++ A+ + S+ D V M++ Y ++G KE +
Sbjct: 289 HAVVLDVFLKSALIDIYFKCRDVEMAQKILCQSSSFDTVVCTTMISGYVLNGKNKEALEA 348
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSR 480
FR ++ +P ++F S A ++ G E + + + ++D+ ++
Sbjct: 349 FRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAK 408
Query: 481 AGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
G L A +I D++ W +++ C +G
Sbjct: 409 CGRLDLACRVFNRI-TEKDAICWNSMITSCSQNG 441
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 178/345 (51%), Gaps = 6/345 (1%)
Query: 170 YCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEP 229
Y G++ +A+ LF ++ LG +WN MI G+ ++ A +F ++ G+ P
Sbjct: 2 YVRTGSLKDAKNLFYTLQ-LGCTS---AWNWMIRGFTMMGQFNYAL-LFYLKMLGAGVSP 56
Query: 230 TSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAF 289
+TF V+ AC + S++ GK +H +GL+ D FVG +L+++Y L AQ F
Sbjct: 57 DKYTFPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLF 116
Query: 290 DEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATME 349
D I +++L + +G+ N + NA+++F EM ++ P+ T +LS C+S A ++
Sbjct: 117 DNIPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLD 176
Query: 350 RGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYA 409
G Q+H A+ CG + D + L+ MY+KC L+ AR + DLVS N +++ Y
Sbjct: 177 LGTQLHGIAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYV 236
Query: 410 MHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLK 469
+G E FR ++++G +PD I+F S L S+K E + + V +
Sbjct: 237 QNGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVF 296
Query: 470 HYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
+ ++D+ + ++ A + + + + D+V+ ++ G V +G
Sbjct: 297 LKSALIDIYFKCRDVEMAQKILCQ-SSSFDTVVCTTMISGYVLNG 340
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 64/140 (45%), Gaps = 1/140 (0%)
Query: 376 MYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHIS 435
MY + GSLK A+ + + + N M+ + M G + + ++L +G PD +
Sbjct: 1 MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60
Query: 436 FLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIP 495
F + AC S+K G + + +K + + ++ L + G L +A IP
Sbjct: 61 FPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIP 120
Query: 496 MAPDSVMWGALLGGCVSHGN 515
DSV+W +L G V +G+
Sbjct: 121 QK-DSVLWNVMLNGYVKNGD 139
>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 896
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 200/626 (31%), Positives = 318/626 (50%), Gaps = 96/626 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G +DD+K +F+ +RD +V
Sbjct: 240 MYAKLGRVDDSKALFESFVDRD------------------------------------MV 263
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ +I F+Q+ EA+ M EG+E + T++SVLPAC+ L++L +GKE H Y+
Sbjct: 264 SWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYV 323
Query: 121 TRNG-FMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
RN + N FV + LVD+Y C + S ++F + N +I GY NG
Sbjct: 324 LRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNG----- 378
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
L ++A +F +++ G+ P + T SV+
Sbjct: 379 ------------------------------LDEKALILFIEMIKVAGLLPNTTTMASVMP 408
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
AC + + IH A+ LG + D +V AL++MY R + ++ FD +E + +
Sbjct: 409 ACVHCEAFSNKESIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVS 468
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLT-----------------PDIYTVGIILSAC 342
G+ + NA+ L EM ++ T P+ T+ +L C
Sbjct: 469 WNTMITGYVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGC 528
Query: 343 SSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQN 402
++LA + +GK++HAYAIR SD+ +G+ALVDMYAKCG L +R + + ++++ N
Sbjct: 529 AALAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWN 588
Query: 403 AMLTAYAMHGHGKEGIAHFRRILASGFR-----PDHISFLSALSACVHAGSIKTGSEFFD 457
++ A MHG G+E + F+ ++A R P+ ++F++ +AC H+G I G F
Sbjct: 589 VLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFY 648
Query: 458 LMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSV-MWGALLGGCVSHGN 515
M + + V+P+ HY C+VDLL RAG+L EAYE + +P D V W +LLG C H N
Sbjct: 649 RMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQN 708
Query: 516 LEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIE 575
+E G++AA L+ LEPN +YV+L+N+++ AG W+ R+ M+ + K PGCSWIE
Sbjct: 709 VELGEVAAKNLLHLEPNVASHYVLLSNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIE 768
Query: 576 DRDEIHKFRASDRSHDRSEEIYTIID 601
RDE+HKF A D SH +SE+++ ++
Sbjct: 769 FRDEVHKFMAGDVSHPQSEQLHGFLE 794
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 149/561 (26%), Positives = 239/561 (42%), Gaps = 103/561 (18%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKCG + D KVF + +RD VSWNS + AL E+
Sbjct: 137 MYGKCGGIGDVCKVFDRITDRDQVSWNSFIA----------ALCRFEK------------ 174
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARL---QKLSLGKEFH 117
W E+A+ MQ E +E ++ TL SV AC+ L L LGK+ H
Sbjct: 175 -W-------------EQALEAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLGKQLH 220
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
GY R GD K F+ N ++ Y + G V
Sbjct: 221 GYSLR-------------------VGDQ----KTFTN---------NALMAMYAKLGRVD 248
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
+++ LF+ V R ++SWN+MIS + + + EA + FR L++ +G+E T SV
Sbjct: 249 DSKALFESF----VDRDMVSWNTMISSFSQSDRFSEALAFFR-LMVLEGVELDGVTIASV 303
Query: 238 LIACADMNSLRKGKEIHALAIALG-LQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
L AC+ + L GKEIHA + L ++FVG ALV+MYC + + + + FD I
Sbjct: 304 LPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRR 363
Query: 297 NLLGKMKEDGFEPNVYTWNAMQLFSEMLSL-DLTPDIYTVGIILSACSSLATMERGKQVH 355
L G+ N A+ LF EM+ + L P+ T+ ++ AC + +H
Sbjct: 364 IELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHCEAFSNKESIH 423
Query: 356 AYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGK 415
YA++ G+ D ++ AL+DMY++ G + + + + D VS N M+T Y + G
Sbjct: 424 GYAVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNTMITGYVLSGRYS 483
Query: 416 EGIAHFRRI-----------------LASGFRPDHISFLSALSACVHAGSIKTGSEFFDL 458
+ + ++P+ I+ ++ L C +I G E
Sbjct: 484 NALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAALAAIAKGKEIHAY 543
Query: 459 MAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE- 517
+ + + +VD+ ++ G L + ++P + + W L+ C HG E
Sbjct: 544 AIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMP-NKNVITWNVLIMACGMHGKGEE 602
Query: 518 ----FGQIAAD--RLIELEPN 532
F + A+ R E +PN
Sbjct: 603 ALELFKNMVAEAGRGGEAKPN 623
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 128/273 (46%), Gaps = 18/273 (6%)
Query: 193 RGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKE 252
R SW + ++ + EA S + ++ + G P +F F +VL A + + L+ G++
Sbjct: 55 RSTASWVDALRSRTRSNDFREAISTYIEMTV-SGARPDNFAFPAVLKAVSGLQDLKTGEQ 113
Query: 253 IHALAIALGLQSDTF-VGGALVEMYCRYQDLVAAQMAFDEIENIEN------LLGKMKED 305
IHA A+ G S + V LV MY + + FD I + + + + +
Sbjct: 114 IHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRFE 173
Query: 306 GFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATM---ERGKQVHAYAIRCG 362
+E + + AMQ+ + LS +T+ + ACS+L M GKQ+H Y++R G
Sbjct: 174 KWEQALEAFRAMQMENMELS------SFTLVSVALACSNLGVMHGLRLGKQLHGYSLRVG 227
Query: 363 YDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFR 422
D AL+ MYAK G + ++ ++ D+VS N M+++++ E +A FR
Sbjct: 228 -DQKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFR 286
Query: 423 RILASGFRPDHISFLSALSACVHAGSIKTGSEF 455
++ G D ++ S L AC H + G E
Sbjct: 287 LMVLEGVELDGVTIASVLPACSHLERLDVGKEI 319
>gi|449448586|ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
Length = 1037
Score = 351 bits (901), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 196/630 (31%), Positives = 339/630 (53%), Gaps = 71/630 (11%)
Query: 6 GSLDDAKKVFKMMP----ERDCVSWNSVVTACAANGLVLEALE----------------- 44
G D A ++F M + DC++ S+++ACA+ G + + ++
Sbjct: 341 GFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILE 400
Query: 45 ---------CLERMSS----LDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLE 91
C + ++ L ET N+V W+ ++ + Q ++ + +MQ EG+
Sbjct: 401 GSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMI 460
Query: 92 PNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKI 151
PN T S+L C L L LG++ H ++ + GF N +V + L+D+Y + G + AL+I
Sbjct: 461 PNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRI 520
Query: 152 FSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLY 211
+ + ++SW +MI+GYV + ++
Sbjct: 521 LRRLP-----------------------------------EDDVVSWTAMIAGYVQHDMF 545
Query: 212 DEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGA 271
EA +F ++ R GI+ + F S + ACA + +LR+G++IHA + A G +D + A
Sbjct: 546 SEALQLFEEMEYR-GIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNA 604
Query: 272 LVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPD 331
L+ +Y R + A +AF++I + N+ G + Y A+Q+F ML + +
Sbjct: 605 LISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVN 664
Query: 332 IYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYK 391
++T G +SA +SLA +++G+Q+H+ ++ GYDS+ + +L+ +YAK GS+ A +
Sbjct: 665 MFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFN 724
Query: 392 RISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKT 451
+S +++S NAM+T Y+ HG G E + F + G P+H++F+ LSAC H G +K
Sbjct: 725 DMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKE 784
Query: 452 GSEFFDLM-AYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGC 510
G ++F+ M +D+ P +HY C+VDLL RAG+L A E+IK++P+ D+++W LL C
Sbjct: 785 GLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLSAC 844
Query: 511 VSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPG 570
V H N+E G+ AA L+ELEP ++ YV+++N++A + +W +R+ MKDR + K PG
Sbjct: 845 VIHKNIEIGERAAHHLLELEPEDSATYVLISNIYAVSRQWIHRDWSRKLMKDRGVKKEPG 904
Query: 571 CSWIEDRDEIHKFRASDRSHDRSEEIYTII 600
SWIE ++ +H F A D+ H + +IY I
Sbjct: 905 RSWIEVKNAVHAFYAGDKLHPLTNQIYEYI 934
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 143/492 (29%), Positives = 235/492 (47%), Gaps = 49/492 (9%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
++V+W A+I G +QNG +EEAI + M A + P LSSVL A ++Q LG++ H
Sbjct: 225 DIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLH 284
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
+ + GF S +V NGLV +Y R ++SA +IFS + ++ VS N++I G + G
Sbjct: 285 CLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSD 344
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
A ELF +M+ RD ++P T S+
Sbjct: 345 RALELFTKMQ------------------------------------RDCLKPDCITVASL 368
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAF--DEIENI 295
L ACA + +L KG ++H+ AI G+ +D + G+L+++Y + D+ A F E ENI
Sbjct: 369 LSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENI 428
Query: 296 ENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVH 355
+ G N+ ++ ++F +M + P+ +T IL C+SL + G+Q+H
Sbjct: 429 VLWNVMLVAYGQLDNLS--DSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIH 486
Query: 356 AYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGK 415
+ I+ G+ +V++ + L+DMYAK G L A +R+ D+VS AM+ Y H
Sbjct: 487 THVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFS 546
Query: 416 EGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMV 475
E + F + G + D+I F SA+SAC +++ G + L ++
Sbjct: 547 EALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALI 606
Query: 476 DLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTG 535
L +R G + EAY +KI +++ W +L+ G G E R++ E
Sbjct: 607 SLYARCGRIQEAYLAFEKIG-DKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAE--- 662
Query: 536 NYVMLANLFAYA 547
N+F Y
Sbjct: 663 -----VNMFTYG 669
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 122/462 (26%), Positives = 222/462 (48%), Gaps = 38/462 (8%)
Query: 53 DNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQ-KLS 111
+N ++ SW+ +I F + + + RM AEG+ PN T + VL AC +
Sbjct: 118 ENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFN 177
Query: 112 LGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYC 171
K+ H GF S+P V N L+D+Y +
Sbjct: 178 YVKQVHSRTFYYGFDSSPLVANLLIDLYSK------------------------------ 207
Query: 172 ENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTS 231
NG + A+++F+ + + I++W +MISG N L +EA +F D+ + I PT
Sbjct: 208 -NGYIESAKKVFNCI----CMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASE-IFPTP 261
Query: 232 FTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDE 291
+ SVL A + G+++H L I G S+T+V LV +Y R + L++A+ F
Sbjct: 262 YVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFST 321
Query: 292 IENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG 351
+ + + + G ++ A++LF++M L PD TV +LSAC+S+ + +G
Sbjct: 322 MNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKG 381
Query: 352 KQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMH 411
Q+H++AI+ G +D+ + +L+D+Y+KC ++ A + T ++V N ML AY
Sbjct: 382 MQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQL 441
Query: 412 GHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHY 471
+ + FR++ G P+ ++ S L C G++ G + + + ++
Sbjct: 442 DNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVC 501
Query: 472 TCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSH 513
+ ++D+ ++ G+L A ++++P D V W A++ G V H
Sbjct: 502 SVLIDMYAKYGQLALALRILRRLP-EDDVVSWTAMIAGYVQH 542
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 112/480 (23%), Positives = 208/480 (43%), Gaps = 62/480 (12%)
Query: 54 NETPNLVSWSAVIGGFTQNGYDEEAIGM----------LFRMQAEGLEPNARTLSSVLPA 103
++T N+V S V G + +D+ + M + M+ G+ N + +L
Sbjct: 9 DKTNNVVRVSGV-GATNSHSFDQTTLHMEQGKSKRIQLMNFMEERGVRSNYQNYLWLLEG 67
Query: 104 CARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSC 163
C L H I+++GF P +++ LVD Y R GD A+K+F
Sbjct: 68 CLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFD---------- 117
Query: 164 NTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLM 223
EN N R + SWN MI +V + F +FR +L
Sbjct: 118 --------ENSN-----------------RSVFSWNKMIHVFVAQKSNFQVFCLFRRMLA 152
Query: 224 RDGIEPTSFTFGSVLIACADMN-SLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDL 282
+GI P +TF VL AC + + K++H+ G S V L+++Y + +
Sbjct: 153 -EGITPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYI 211
Query: 283 VAAQMAFD-----EIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGI 337
+A+ F+ +I ++ + ++G E A+ LF +M + ++ P Y +
Sbjct: 212 ESAKKVFNCICMKDIVTWVAMISGLSQNGLEE-----EAILLFCDMHASEIFPTPYVLSS 266
Query: 338 ILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPD 397
+LSA + + E G+Q+H I+ G+ S+ ++ LV +Y++ L A + +++ D
Sbjct: 267 VLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRD 326
Query: 398 LVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFD 457
VS N++++ G + F ++ +PD I+ S LSAC G++ G +
Sbjct: 327 GVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHS 386
Query: 458 LMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
+ + ++DL S+ ++ A++F + V+W +L V++G L+
Sbjct: 387 HAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTE-TENIVLWNVML---VAYGQLD 442
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 96/428 (22%), Positives = 170/428 (39%), Gaps = 104/428 (24%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G L A ++ + +PE D VSW +++ + + EAL+ E
Sbjct: 507 MYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFE------------- 553
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
M+ G++ + +S + ACA ++ L G++ H
Sbjct: 554 -----------------------EMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQS 590
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
GF ++ + N L+ +Y RCG + A F K KN +S N+++ G ++G EA
Sbjct: 591 YAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEAL 650
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
++F +M +R E FT+GS + A
Sbjct: 651 QVFVRM------------------------------------LRTEAEVNMFTYGSAISA 674
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
A + ++++G++IH++ + G S+ V +L+ +Y + + A F+++
Sbjct: 675 AASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMS------- 727
Query: 301 KMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSSLA 346
E NV +WNAM +LF EM + P+ T +LSACS +
Sbjct: 728 -------ERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIG 780
Query: 347 TMERGKQVHA--YAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTP-DLVSQNA 403
++ G + I H +VD+ + G L A K + P D +
Sbjct: 781 LVKEGLDYFESMFKIHDLVPKSEHY-VCVVDLLGRAGQLDRAMEYIKEMPIPADAMIWRT 839
Query: 404 MLTAYAMH 411
+L+A +H
Sbjct: 840 LLSACVIH 847
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 134/327 (40%), Gaps = 41/327 (12%)
Query: 220 DLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRY 279
+ + G+ + +L C SL + +H G + + +LV+ Y R+
Sbjct: 47 NFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRH 106
Query: 280 QDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQ--------------LFSEMLS 325
D A FDE N +V++WN M LF ML+
Sbjct: 107 GDQHGAVKVFDENSN--------------RSVFSWNKMIHVFVAQKSNFQVFCLFRRMLA 152
Query: 326 LDLTPDIYTVGIILSAC-SSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLK 384
+TP+ YT +L AC KQVH+ G+DS + L+D+Y+K G ++
Sbjct: 153 EGITPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIE 212
Query: 385 HARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACV 444
A+ + I D+V+ AM++ + +G +E I F + AS P S LSA
Sbjct: 213 SAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSAST 272
Query: 445 HAGSIKTGSEFFDLMAYYDVKPSLKHYTC--MVDLLSRAGELGEAYEFIKKIPMAPDSVM 502
+ G + L+ + + Y C +V L SR+ +L A E I + D V
Sbjct: 273 KIQLFELGEQLHCLVIKWGFHS--ETYVCNGLVALYSRSRKLISA-ERIFSTMNSRDGVS 329
Query: 503 WGALLGGCVSHGNLEFGQIAADRLIEL 529
+ +L+ G V G +DR +EL
Sbjct: 330 YNSLISGLVQQG-------FSDRALEL 349
>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
Length = 799
Score = 351 bits (901), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 203/606 (33%), Positives = 313/606 (51%), Gaps = 78/606 (12%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y KCG LDDAK+VF M +RD +V+
Sbjct: 164 YAKCGCLDDAKEVFDKMHKRD------------------------------------VVA 187
Query: 62 WSAVIGGFT--QNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
W+++I GF+ + YDE A +L +MQ + + PN+ T+ VLPA A++ L GKE HG+
Sbjct: 188 WNSMISGFSLHEGSYDEVA-RLLVQMQND-VSPNSSTIVGVLPAVAQVNSLRHGKEIHGF 245
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
R GF+ + V G++DVY +C C + A
Sbjct: 246 CVRRGFVGDVVVGTGILDVYGKC-------------------QC------------IDYA 274
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLM--RDGIEPTSFTFGSV 237
R +FD M G+ + ++W++M+ YV EA +F LLM D I ++ T +V
Sbjct: 275 RRIFDMM---GIVKNEVTWSAMVGAYVVCDFMREALELFCQLLMLKDDVIVLSAVTLATV 331
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
+ CA++ L G +H AI G D VG L+ MY + + A F+E++ +
Sbjct: 332 IRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNEMDLRDA 391
Query: 298 LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAY 357
+ G+ N + +++F EM + P+ T+ +L AC+ LA + G H Y
Sbjct: 392 VSFTAIISGYVQNGNSEEGLRMFLEMQLSGINPEKATLASVLPACAHLAGLHYGSCSHCY 451
Query: 358 AIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEG 417
AI CG+ +D I AL+DMYAKCG + AR + R+ +VS N M+ AY +HG G E
Sbjct: 452 AIICGFTADTMICNALIDMYAKCGKIDTARKVFDRMHKRGIVSWNTMIIAYGIHGIGLEA 511
Query: 418 IAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVD 476
+ F + + G +PD ++F+ +SAC H+G + G +F+ M + + P ++HY CMVD
Sbjct: 512 LLLFDNMQSEGLKPDDVTFICLISACSHSGLVAEGKYWFNAMTQDFGIIPRMEHYACMVD 571
Query: 477 LLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGN 536
LLSRAG E + FI+K+P+ PD +WGALL C + N+E G+ + ++ +L P +TGN
Sbjct: 572 LLSRAGLFKEVHSFIEKMPLEPDVRVWGALLSACRVYKNVELGEGVSKKIQKLGPESTGN 631
Query: 537 YVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASD-RSHDRSEE 595
+V+L+N+++ GRW D A+ R K++ KSPGCSWIE +H F RSH + +
Sbjct: 632 FVLLSNMYSAVGRWDDAAQVRFTQKEQGFEKSPGCSWIEISGVVHTFLGGGYRSHPQLTQ 691
Query: 596 IYTIID 601
I +D
Sbjct: 692 ISNKLD 697
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 127/457 (27%), Positives = 206/457 (45%), Gaps = 74/457 (16%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y C L A+ VF MP R N+V
Sbjct: 60 LYIACSELKIARHVFDKMPHR----------------------------------PKNVV 85
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
W+ +I + NG EEAI + ++M G+ PN T VL AC+ L++ S G+E H I
Sbjct: 86 LWNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFPFVLKACSALKEASEGREIHCDI 145
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R SN +V LVD Y +CG + A ++F K ++ V+ N++I G+ ++ E
Sbjct: 146 KRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMHKRDVVAWNSMISGF----SLHEGS 201
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+D++ L VQ M++ + P S T VL A
Sbjct: 202 --YDEVARLLVQ------------------------------MQNDVSPNSSTIVGVLPA 229
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
A +NSLR GKEIH + G D VG ++++Y + Q + A+ FD + ++N +
Sbjct: 230 VAQVNSLRHGKEIHGFCVRRGFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVT 289
Query: 301 KMKEDG-FEPNVYTWNAMQLFSEMLSLD---LTPDIYTVGIILSACSSLATMERGKQVHA 356
G + + A++LF ++L L + T+ ++ C++L + G +H
Sbjct: 290 WSAMVGAYVVCDFMREALELFCQLLMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHC 349
Query: 357 YAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKE 416
YAI+ G+ D+ +G L+ MYAKCG + A + + D VS A+++ Y +G+ +E
Sbjct: 350 YAIKSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEE 409
Query: 417 GIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGS 453
G+ F + SG P+ + S L AC H + GS
Sbjct: 410 GLRMFLEMQLSGINPEKATLASVLPACAHLAGLHYGS 446
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 176/359 (49%), Gaps = 36/359 (10%)
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
AR +FD+M H + ++ WN +I Y N Y+EA ++ +L GI P FTF VL
Sbjct: 70 ARHVFDKMPHR--PKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGY-GITPNRFTFPFVL 126
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
AC+ + +G+EIH L L+S+ +V ALV+ Y + L A+ FD++ + +
Sbjct: 127 KACSALKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMHKRDVV 186
Query: 299 LGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYA 358
GF + +++ + + D++P+ T+ +L A + + ++ GK++H +
Sbjct: 187 AWNSMISGFSLHEGSYDEVARLLVQMQNDVSPNSSTIVGVLPAVAQVNSLRHGKEIHGFC 246
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNAMLTAYAMHGHGKEG 417
+R G+ DV +GT ++D+Y KC + +AR + + + V+ +AM+ AY + +E
Sbjct: 247 VRRGFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGAYVVCDFMREA 306
Query: 418 IAHFRRILASGFRPDHISFLSALS-----------------ACVHAGSIKTGSEFFDLMA 460
+ F ++L D + LSA++ C+H +IK+G DLM
Sbjct: 307 LELFCQLL---MLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGF-VLDLMV 362
Query: 461 YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFG 519
++ + ++ G + A F ++ + D+V + A++ G V +GN E G
Sbjct: 363 ----------GNTLLSMYAKCGIINGAMRFFNEMDLR-DAVSFTAIISGYVQNGNSEEG 410
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 136/297 (45%), Gaps = 43/297 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG ++ A + F M RD VS+ ++++
Sbjct: 369 MYAKCGIINGAMRFFNEMDLRDAVSFTAIIS----------------------------- 399
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
G+ QNG EE + M MQ G+ P TL+SVLPACA L L G H Y
Sbjct: 400 -------GYVQNGNSEEGLRMFLEMQLSGINPEKATLASVLPACAHLAGLHYGSCSHCYA 452
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
GF ++ + N L+D+Y +CG + +A K+F + + VS NT+I+ Y +G EA
Sbjct: 453 IICGFTADTMICNALIDMYAKCGKIDTARKVFDRMHKRGIVSWNTMIIAYGIHGIGLEAL 512
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LFD M+ G++ +++ +IS + L E F + GI P + ++
Sbjct: 513 LLFDNMQSEGLKPDDVTFICLISACSHSGLVAEGKYWFNAMTQDFGIIPRMEHYACMV-- 570
Query: 241 CADMNSLRKG--KEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
D+ S R G KE+H+ + L+ D V GAL+ Y+++ + +I+ +
Sbjct: 571 --DLLS-RAGLFKEVHSFIEKMPLEPDVRVWGALLSACRVYKNVELGEGVSKKIQKL 624
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 87/187 (46%), Gaps = 12/187 (6%)
Query: 337 IILSACSSLATMERGKQVHAYAIRCGYDS--------DVHIGTALVDMYAKCGSLKHARL 388
++L +C ++ RGK +H + ++C + + DV LVD+Y C LK AR
Sbjct: 14 VLLESCIQSKSLFRGKLIHQHLLKCLHRTHETNLTNFDVPF-EKLVDLYIACSELKIARH 72
Query: 389 AYKRIS--TPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHA 446
+ ++ ++V N ++ AYA +G +E I + ++L G P+ +F L AC
Sbjct: 73 VFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFPFVLKACSAL 132
Query: 447 GSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGAL 506
G E + ++ ++ T +VD ++ G L +A E K+ D V W ++
Sbjct: 133 KEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMH-KRDVVAWNSM 191
Query: 507 LGGCVSH 513
+ G H
Sbjct: 192 ISGFSLH 198
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 80/176 (45%), Gaps = 15/176 (8%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG +D A+KVF M +R VSWN+++ A +G+ LEAL + M S + P+ V
Sbjct: 470 MYAKCGKIDTARKVFDRMHKRGIVSWNTMIIAYGIHGIGLEALLLFDNMQS-EGLKPDDV 528
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRM-QAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
++ +I + +G E M Q G+ P + ++ L + L KE H +
Sbjct: 529 TFICLISACSHSGLVAEGKYWFNAMTQDFGIIPRMEHYACMVDL---LSRAGLFKEVHSF 585
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGN 175
I + P V R G +LSA +++ + VS +G GN
Sbjct: 586 IEKMPL--EPDV--------RVWGALLSACRVYKNVELGEGVSKKIQKLGPESTGN 631
>gi|356528338|ref|XP_003532761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 785
Score = 351 bits (900), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 200/582 (34%), Positives = 321/582 (55%), Gaps = 49/582 (8%)
Query: 25 SWNSVVTACAANGLVLEALECLERMSS--LDNETPN--LVSWSAVIGGFTQNGYDEEAIG 80
S+N+VV N L+ +C E S+ L +E + +VSW+++I G T NG+ +
Sbjct: 191 SYNAVV-----NSLIAAYFKCGEVESARILFDELSDRDVVSWNSMISGCTMNGFSRNGLE 245
Query: 81 MLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYR 140
+M G++ ++ TL +VL ACA + L+LG+ H Y + GF N L+D+Y
Sbjct: 246 FFIQMLNLGVDVDSATLVNVLVACANVGNLTLGRALHAYGVKAGFSGGVMFNNTLLDMYS 305
Query: 141 RCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNS 200
+CG++ NG A E+F +M + I+SW S
Sbjct: 306 KCGNL---------------------------NG----ANEVFVKMG----ETTIVSWTS 330
Query: 201 MISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIAL 260
+I+ +V L+ EA +F D + G+ P + SV+ ACA NSL KG+E+H
Sbjct: 331 IIAAHVREGLHYEAIGLF-DEMQSKGLRPDIYAVTSVVHACACSNSLDKGREVHNHIKKN 389
Query: 261 GLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG-KMKEDGFEPNVYTWNAMQL 319
+ S+ V AL+ MY + + A + F ++ ++N++ G+ N A+QL
Sbjct: 390 NMGSNLPVSNALMNMYAKCGSMEEANLIFSQLP-VKNIVSWNTMIGGYSQNSLPNEALQL 448
Query: 320 FSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAK 379
F +M L PD T+ +L AC+ LA +E+G+++H + +R GY SD+H+ ALVDMY K
Sbjct: 449 FLDMQK-QLKPDDVTMACVLPACAGLAALEKGREIHGHILRKGYFSDLHVACALVDMYVK 507
Query: 380 CGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSA 439
CG L A+ + I D++ M+ Y MHG GKE I+ F ++ +G P+ SF S
Sbjct: 508 CGLLVLAQQLFDMIPKKDMILWTVMIAGYGMHGFGKEAISTFEKMRVAGIEPEESSFTSI 567
Query: 440 LSACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAP 498
L AC H+G +K G + FD M + +++P L+HY CMVDLL R+G L AY+FI+ +P+ P
Sbjct: 568 LYACTHSGLLKEGWKLFDSMKSECNIEPKLEHYACMVDLLIRSGNLSRAYKFIETMPIKP 627
Query: 499 DSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQ 558
D+ +WGALL GC H ++E + A+ + ELEP NT YV+LAN++A A +W ++ + ++
Sbjct: 628 DAAIWGALLSGCRIHHDVELAEKVAEHIFELEPENTRYYVLLANVYAEAEKWEEVKKIQR 687
Query: 559 KMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTII 600
++ + GCSWIE + + + F A D SH +++ I +++
Sbjct: 688 RISKGGLKNDQGCSWIEVQGKFNIFFAGDTSHPQAKMIDSLL 729
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 127/489 (25%), Positives = 225/489 (46%), Gaps = 44/489 (8%)
Query: 50 SSLDNETPN--LVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARL 107
++L T N V +A I F + G A+ +L R Q LE N T SVL CA L
Sbjct: 13 ATLSETTHNNVTVDKNAKICKFCEMGDLRNAMKLLSRSQRSELELN--TYCSVLQLCAEL 70
Query: 108 QKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTII 167
+ L GK H I+ NG + + LV +Y CGD++
Sbjct: 71 KSLEDGKRVHSIISSNGMAIDEVLGAKLVFMYVNCGDLV--------------------- 109
Query: 168 VGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGI 227
+ R +FD + + I WN ++S Y Y E+ +F + GI
Sbjct: 110 ----------KGRRIFDGI----LNDKIFLWNLLMSEYAKIGNYRESVGLFEKM-QELGI 154
Query: 228 EPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQM 287
S+TF VL A +R+ K +H + LG S V +L+ Y + ++ +A++
Sbjct: 155 RGDSYTFTCVLKGFAASAKVRECKRVHGYVLKLGFGSYNAVVNSLIAAYFKCGEVESARI 214
Query: 288 AFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLAT 347
FDE+ + + + G N ++ N ++ F +ML+L + D T+ +L AC+++
Sbjct: 215 LFDELSDRDVVSWNSMISGCTMNGFSRNGLEFFIQMLNLGVDVDSATLVNVLVACANVGN 274
Query: 348 MERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTA 407
+ G+ +HAY ++ G+ V L+DMY+KCG+L A + ++ +VS +++ A
Sbjct: 275 LTLGRALHAYGVKAGFSGGVMFNNTLLDMYSKCGNLNGANEVFVKMGETTIVSWTSIIAA 334
Query: 408 YAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPS 467
+ G E I F + + G RPD + S + AC + S+ G E + + ++ +
Sbjct: 335 HVREGLHYEAIGLFDEMQSKGLRPDIYAVTSVVHACACSNSLDKGREVHNHIKKNNMGSN 394
Query: 468 LKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNL--EFGQIAADR 525
L ++++ ++ G + EA ++P+ + V W ++GG S +L E Q+ D
Sbjct: 395 LPVSNALMNMYAKCGSMEEANLIFSQLPV-KNIVSWNTMIGG-YSQNSLPNEALQLFLDM 452
Query: 526 LIELEPNNT 534
+L+P++
Sbjct: 453 QKQLKPDDV 461
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 124/416 (29%), Positives = 182/416 (43%), Gaps = 81/416 (19%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG+L+ A +VF M E VSW S++ A GL
Sbjct: 303 MYSKCGNLNGANEVFVKMGETTIVSWTSIIAAHVREGL---------------------- 340
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
EAIG+ MQ++GL P+ ++SV+ ACA L G+E H +I
Sbjct: 341 --------------HYEAIGLFDEMQSKGLRPDIYAVTSVVHACACSNSLDKGREVHNHI 386
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+N SN V N L+++Y +CG M A IFS+ +KN VS NT+I GY +N
Sbjct: 387 KKNNMGSNLPVSNALMNMYAKCGSMEEANLIFSQLPVKNIVSWNTMIGGYSQN------- 439
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
SL +EA +F D M+ ++P T VL A
Sbjct: 440 ----------------------------SLPNEALQLFLD--MQKQLKPDDVTMACVLPA 469
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA + +L KG+EIH + G SD V ALV+MY + LV AQ FD I + +L
Sbjct: 470 CAGLAALEKGREIHGHILRKGYFSDLHVACALVDMYVKCGLLVLAQQLFDMIPKKDMILW 529
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG-KQVHAYAI 359
+ G+ + + A+ F +M + P+ + IL AC+ ++ G K +
Sbjct: 530 TVMIAGYGMHGFGKEAISTFEKMRVAGIEPEESSFTSILYACTHSGLLKEGWKLFDSMKS 589
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST----PDLVSQNAMLTAYAMH 411
C + + +VD+ + G+L AYK I T PD A+L+ +H
Sbjct: 590 ECNIEPKLEHYACMVDLLIRSGNLSR---AYKFIETMPIKPDAAIWGALLSGCRIH 642
>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
Length = 673
Score = 351 bits (900), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 188/551 (34%), Positives = 307/551 (55%), Gaps = 18/551 (3%)
Query: 55 ETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGK 114
+ PN + W+ ++ G+ + A+ + M + GL PN+ T +L +CA+ + G+
Sbjct: 27 QEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAKSKAFEEGQ 86
Query: 115 EFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
+ HG++ + G+ + +V L+ +Y + G + A K+F + S ++ VS +I GY +G
Sbjct: 87 QIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTALITGYASSG 146
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTF 234
N+ A+E+FD++ + ++SWN+MISGY + Y EA +F+++ M+ + P T
Sbjct: 147 NIRSAQEMFDEIP----VKDVVSWNAMISGYAETGSYKEALELFKEM-MKTNVRPDEGTM 201
Query: 235 GSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFD---- 290
+VL ACA S+ G+++H+ G S+ + AL+++Y + + A F+
Sbjct: 202 VTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEGLSC 261
Query: 291 -EIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATME 349
++ + L+G N+Y A+ LF EML +P+ T+ IL AC+ L ++
Sbjct: 262 KDVVSWNTLIGGYTH----MNLYK-EALLLFQEMLRSGESPNDVTIVSILPACAHLGAID 316
Query: 350 RGKQVHAYAIRCGYD--SDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTA 407
G+ +H Y + D + + T+L+DMYAKCG ++ A + + L S NAM+
Sbjct: 317 IGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFG 376
Query: 408 YAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKP 466
+AMHG G F R+ +G PD I+F+ LSAC H+G + G F M YD+ P
Sbjct: 377 FAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYDITP 436
Query: 467 SLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRL 526
L+HY CM+DLL +G EA E IK +PM PD V+W +LL C HGNLE + A L
Sbjct: 437 KLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLELAESFARNL 496
Query: 527 IELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRAS 586
+++EP N G+YV+L+N++A AG W ++A+ R + + M K PGCS IE E+H+F
Sbjct: 497 MKVEPENPGSYVLLSNIYATAGEWDEVAKVRALLNGKGMKKVPGCSSIEIDSEVHEFIVG 556
Query: 587 DRSHDRSEEIY 597
D+ H R+ EIY
Sbjct: 557 DKLHPRNREIY 567
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 124/436 (28%), Positives = 203/436 (46%), Gaps = 83/436 (19%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY + G L+DA KVF RD VS+ +++T A++G + A E + + D +V
Sbjct: 110 MYAQNGRLEDAHKVFDRSSHRDVVSYTALITGYASSGNIRSAQEMFDEIPVKD-----VV 164
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A+I G+ + G +EA+ + M + P+ T+ +VL ACA+ + + LG++ H +I
Sbjct: 165 SWNAMISGYAETGSYKEALELFKEMMKTNVRPDEGTMVTVLSACAQSRSVELGRQVHSWI 224
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+GF SN +VN L+D+Y +CG + +A +F S K+ VS NT+I GY
Sbjct: 225 DDHGFGSNLKIVNALIDLYSKCGQVETACGLFEGLSCKDVVSWNTLIGGYT--------- 275
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
H+ +LY EA +F+++L R G P T S+L A
Sbjct: 276 -------HM-------------------NLYKEALLLFQEML-RSGESPNDVTIVSILPA 308
Query: 241 CADMNSLRKGKEIHALAIALGLQSDT---FVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
CA + ++ G+ IH + I L+ T + +L++MY + D+ AA F+ +
Sbjct: 309 CAHLGAIDIGRWIH-VYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSM----- 362
Query: 298 LLGKMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACS 343
++ +WNAM LFS M + PD T +LSACS
Sbjct: 363 ---------LHKSLSSWNAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACS 413
Query: 344 SLATMERGKQVHAYAIRCGYDSDV-----HIGTALVDMYAKCGSLKHARLAYKRIS-TPD 397
++ G+ + + D D+ H G ++D+ G K A+ K + PD
Sbjct: 414 HSGKLDLGRHIFKSMTQ---DYDITPKLEHYG-CMIDLLGHSGLFKEAKEMIKTMPMEPD 469
Query: 398 LVSQNAMLTAYAMHGH 413
V ++L A HG+
Sbjct: 470 GVIWCSLLKACRRHGN 485
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 115/448 (25%), Positives = 206/448 (45%), Gaps = 84/448 (18%)
Query: 148 ALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVD 207
A+ +F+ N++ NT++ GY + + A +L+ M LG+
Sbjct: 19 AISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLL--------------- 63
Query: 208 NSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTF 267
P S+TF +L +CA + +G++IH + LG + D +
Sbjct: 64 ---------------------PNSYTFPFLLKSCAKSKAFEEGQQIHGHVLKLGYEPDLY 102
Query: 268 VGGALVEMYCRYQDLVAAQMAFD-----EIENIENLLGKMKEDG--------FE----PN 310
V +L+ MY + L A FD ++ + L+ G F+ +
Sbjct: 103 VHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTALITGYASSGNIRSAQEMFDEIPVKD 162
Query: 311 VYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHA 356
V +WNAM +LF EM+ ++ PD T+ +LSAC+ ++E G+QVH+
Sbjct: 163 VVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDEGTMVTVLSACAQSRSVELGRQVHS 222
Query: 357 YAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKE 416
+ G+ S++ I AL+D+Y+KCG ++ A ++ +S D+VS N ++ Y KE
Sbjct: 223 WIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKE 282
Query: 417 GIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVK-------PSLK 469
+ F+ +L SG P+ ++ +S L AC H G+I G + Y D K PSL+
Sbjct: 283 ALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIGRW---IHVYIDKKLKDVTNAPSLR 339
Query: 470 HYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG--NLEFGQIAADRLI 527
T ++D+ ++ G++ A++ + + W A++ G HG N F + R
Sbjct: 340 --TSLIDMYAKCGDIEAAHQVFNSM-LHKSLSSWNAMIFGFAMHGRANAGFDLFSRMRKN 396
Query: 528 ELEPNNTGNYVMLANLFAYAGRWSDLAR 555
+EP++ +V L + +++G+ DL R
Sbjct: 397 GIEPDDI-TFVGLLSACSHSGKL-DLGR 422
>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
[Vitis vinifera]
gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
Length = 742
Score = 351 bits (900), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 192/541 (35%), Positives = 302/541 (55%), Gaps = 36/541 (6%)
Query: 57 PNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEF 116
P++ W+A+I G++ + + +AI M RMQA G+ P+ TL VL AC+ + L +GK
Sbjct: 132 PSVFLWNAIIRGYSSHNFFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRV 191
Query: 117 HGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNV 176
HG I R GF S+ FV NGLV +Y +CG V
Sbjct: 192 HGQIFRLGFESDVFVQNGLVALYAKCG-------------------------------RV 220
Query: 177 AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGS 236
+AR +F+ ++ R I+SW SMISGY N L EA +F + R+ ++P S
Sbjct: 221 EQARIVFEGLD----DRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRN-VKPDWIALVS 275
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
VL A D+ L +GK IH + +GL+ + + +L MY + ++ A+ FD++E
Sbjct: 276 VLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQVMVARSFFDQMEIPN 335
Query: 297 NLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHA 356
++ G+ N YT A+ LF EM+S ++ D TV + AC+ + +++ K +
Sbjct: 336 VMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILACAQVGSLDLAKWMGD 395
Query: 357 YAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKE 416
Y + Y +DV + TAL+DM+AKCGS+ AR + R D+V +AM+ Y +HG G++
Sbjct: 396 YINKTEYRNDVFVNTALIDMFAKCGSVDLAREVFDRTLDKDVVVWSAMIVGYGLHGRGQD 455
Query: 417 GIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVD 476
I F + +G P+ ++F+ L+AC H+G ++ G E F M YY ++ +HY C+VD
Sbjct: 456 AIDLFYAMKQAGVCPNDVTFVGLLTACNHSGLVEEGWELFHSMKYYGIEARHQHYACVVD 515
Query: 477 LLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGN 536
LL R+G L EAY+FI +P+ P +WGALLG C + ++ G+ AA++L L+P NTG+
Sbjct: 516 LLGRSGHLNEAYDFITTMPIEPGVSVWGALLGACKIYRHVTLGEYAAEQLFSLDPFNTGH 575
Query: 537 YVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEI 596
YV L+NL+A + W +A+ R M+++ + K G S IE ++ FR D+SH R +EI
Sbjct: 576 YVQLSNLYASSRLWDSVAKVRILMREKGLSKDLGYSLIEINGKLQAFRVGDKSHPRFKEI 635
Query: 597 Y 597
+
Sbjct: 636 F 636
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 106/417 (25%), Positives = 203/417 (48%), Gaps = 13/417 (3%)
Query: 110 LSLGKEFHGYITRNGFMSNPFVVNGLVD--VYRRCGDMLSALKIFSKFSIKNEVSCNTII 167
L L + YI +GF + F + L+D V++R + + A + S +++ +
Sbjct: 53 LPLPLDHSDYIPYSGFDFDSFF-SSLLDHSVHKRHLNQIHAQLVVSGL-VESGFLVTKFV 110
Query: 168 VGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGI 227
G + AR++FD+ + + WN++I GY ++ + +A M+ + G+
Sbjct: 111 NASWNIGEIGYARKVFDEFP----EPSVFLWNAIIRGYSSHNFFGDAIEMYSRM-QASGV 165
Query: 228 EPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQM 287
P FT VL AC+ + L GK +H LG +SD FV LV +Y + + A++
Sbjct: 166 NPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDVFVQNGLVALYAKCGRVEQARI 225
Query: 288 AFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLAT 347
F+ +++ + G+ N A+++F +M ++ PD + +L A + +
Sbjct: 226 VFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDVED 285
Query: 348 MERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTA 407
+E+GK +H ++ G + + + +L MYAKCG + AR + ++ P+++ NAM++
Sbjct: 286 LEQGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMISG 345
Query: 408 YAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPS 467
YA +G+ E + F+ +++ R D I+ SA+ AC GS+ D + + +
Sbjct: 346 YAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILACAQVGSLDLAKWMGDYINKTEYRND 405
Query: 468 LKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAAD 524
+ T ++D+ ++ G + A E + + D V+W A++ G HG GQ A D
Sbjct: 406 VFVNTALIDMFAKCGSVDLAREVFDRT-LDKDVVVWSAMIVGYGLHGR---GQDAID 458
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 104/405 (25%), Positives = 176/405 (43%), Gaps = 48/405 (11%)
Query: 13 KVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQN 72
++F++ E D N +V A G V +A E LD+ N+VSW+++I G+ QN
Sbjct: 194 QIFRLGFESDVFVQNGLVALYAKCGRVEQARIVFE---GLDDR--NIVSWTSMISGYGQN 248
Query: 73 GYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVV 132
G EA+ + +M+ ++P+ L SVL A ++ L GK HG + + G P ++
Sbjct: 249 GLPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLL 308
Query: 133 NGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQ 192
L +Y +CG ++ A F + I N + N +I GY +NG EA LF +M
Sbjct: 309 ISLTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEM------ 362
Query: 193 RGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKE 252
IS N I S T S ++ACA + SL K
Sbjct: 363 ---ISKN---------------------------IRTDSITVRSAILACAQVGSLDLAKW 392
Query: 253 IHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVY 312
+ ++D FV AL++M+ + + A+ FD + + ++ G+ +
Sbjct: 393 MGDYINKTEYRNDVFVNTALIDMFAKCGSVDLAREVFDRTLDKDVVVWSAMIVGYGLHGR 452
Query: 313 TWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTA 372
+A+ LF M + P+ T +L+AC+ +E G ++ G ++
Sbjct: 453 GQDAIDLFYAMKQAGVCPNDVTFVGLLTACNHSGLVEEGWELFHSMKYYGIEARHQHYAC 512
Query: 373 LVDMYAKCGSLKHARLAYKRIST----PDLVSQNAMLTAYAMHGH 413
+VD+ + G H AY I+T P + A+L A ++ H
Sbjct: 513 VVDLLGRSG---HLNEAYDFITTMPIEPGVSVWGALLGACKIYRH 554
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 145/315 (46%), Gaps = 47/315 (14%)
Query: 28 SVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQA 87
S+ A G V+ A ++M E PN++ W+A+I G+ +NGY EA+G+ M +
Sbjct: 310 SLTAMYAKCGQVMVARSFFDQM-----EIPNVMMWNAMISGYAKNGYTNEAVGLFQEMIS 364
Query: 88 EGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLS 147
+ + ++ T+ S + ACA++ L L K YI + + ++ FV L+D++ +CG +
Sbjct: 365 KNIRTDSITVRSAILACAQVGSLDLAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSVDL 424
Query: 148 ALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVD 207
A ++F + K+ V + +IVGY +G +A +LF M+ GV +++ +++
Sbjct: 425 AREVFDRTLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLTACNH 484
Query: 208 NSLYDEAFSMFR------------------DLLMRDG-------------IEPTSFTFGS 236
+ L +E + +F DLL R G IEP +G+
Sbjct: 485 SGLVEEGWELFHSMKYYGIEARHQHYACVVDLLGRSGHLNEAYDFITTMPIEPGVSVWGA 544
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
+L AC + G+ +L D F G V++ +L A+ +D + +
Sbjct: 545 LLGACKIYRHVTLGEYAAEQLFSL----DPFNTGHYVQL----SNLYASSRLWDSVAKVR 596
Query: 297 NLLGKMKEDGFEPNV 311
L M+E G ++
Sbjct: 597 IL---MREKGLSKDL 608
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 67/172 (38%), Gaps = 36/172 (20%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
M+ KCGS+D A++VF ++D V W
Sbjct: 415 MFAKCGSVDLAREVFDRTLDKDVVVW---------------------------------- 440
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SA+I G+ +G ++AI + + M+ G+ PN T +L AC + G E +
Sbjct: 441 --SAMIVGYGLHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLTACNHSGLVEEGWELFHSM 498
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCE 172
G + +VD+ R G + A + I+ VS ++G C+
Sbjct: 499 KYYGIEARHQHYACVVDLLGRSGHLNEAYDFITTMPIEPGVSVWGALLGACK 550
>gi|449461217|ref|XP_004148338.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 351 bits (900), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 195/550 (35%), Positives = 303/550 (55%), Gaps = 42/550 (7%)
Query: 57 PNLVSWSAVIGGFTQNGYDEEAIGMLF--RMQAEGLEPNARTLSSVLPACARLQKLSLGK 114
P S++ +I G + +++ ++ + F RM+ GL+PN T + AC+ L + G+
Sbjct: 89 PTEYSFNVMIRGLS-TAWNKSSLALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENGR 147
Query: 115 EFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
H + R G + V + L+ +Y RCG M
Sbjct: 148 MGHCSVIRRGLDEDGHVSHSLITMYARCGKM----------------------------- 178
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTF 234
+AR++FD++ Q+ ++SWNSMISGY EA +FR++ M G +P +
Sbjct: 179 --GDARKVFDEIS----QKDLVSWNSMISGYSKMRHAGEAVGLFREM-MEAGFQPNEMSL 231
Query: 235 GSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIEN 294
SVL AC ++ L+ G + + + + F+G AL+ MY + DLV+A+ FD ++
Sbjct: 232 VSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMKK 291
Query: 295 IENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV 354
+ + G+ N + A++LF +M PD T+ ILSAC+S+ ++ GKQV
Sbjct: 292 KDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQV 351
Query: 355 HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHG 414
YA G+ DV++GTALVDMYAKCGSL +A + + + VS NAM++A A HG
Sbjct: 352 EIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPNKNEVSWNAMISALAFHGQA 411
Query: 415 KEGIAHFRRILASG--FRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHY 471
+E +A F+ ++ G P+ I+F+ LSACVHAG + G F +M+ + + P ++HY
Sbjct: 412 QEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIEHY 471
Query: 472 TCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEP 531
+CMVDL SRAG L EA++F+ +P PD V+ GALLG C N++ + L+ELEP
Sbjct: 472 SCMVDLFSRAGHLEEAWDFVMTMPEKPDEVILGALLGACQKRKNIDISERVMKLLLELEP 531
Query: 532 NNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHD 591
+N+GNYV+ + L+A RW D AR R MK + + K+PGCSWI+ ++H+F A D H
Sbjct: 532 SNSGNYVISSKLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDINSQLHEFHAGDVLHQ 591
Query: 592 RSEEIYTIID 601
EI+ I+D
Sbjct: 592 EWIEIHQILD 601
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 106/411 (25%), Positives = 176/411 (42%), Gaps = 76/411 (18%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +CG + DA+KVF + ++D LV
Sbjct: 171 MYARCGKMGDARKVFDEISQKD------------------------------------LV 194
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+++I G+++ + EA+G+ M G +PN +L SVL AC L L LG ++
Sbjct: 195 SWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFV 254
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
N N F+ + L+ +Y +CGD++SA +IF K++V+ N +I GY +NG
Sbjct: 255 VENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNG------ 308
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+ +EA +F+D+ M P T +L A
Sbjct: 309 -----------------------------MSEEAIKLFQDMRM-SSTAPDQITLIGILSA 338
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA + +L GK++ A G Q D +VG ALV+MY + L A F + N +
Sbjct: 339 CASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPNKNEVSW 398
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSL--DLTPDIYTVGIILSACSSLATMERGKQV-HAY 357
+ A+ LF M++ ++P+ T +LSAC ++ G+++ H
Sbjct: 399 NAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMM 458
Query: 358 AIRCGYDSDVHIGTALVDMYAKCGSLKHA-RLAYKRISTPDLVSQNAMLTA 407
+ G + + +VD++++ G L+ A PD V A+L A
Sbjct: 459 SSSFGLVPKIEHYSCMVDLFSRAGHLEEAWDFVMTMPEKPDEVILGALLGA 509
>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 882
Score = 351 bits (900), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 199/581 (34%), Positives = 321/581 (55%), Gaps = 44/581 (7%)
Query: 20 ERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAI 79
E+D + N++V + G + A E+M + D +VSW+A I G +G+D A+
Sbjct: 237 EKDVFTANALVDMYSKLGDIEMAATVFEKMPAAD-----VVSWNAFISGCVTHGHDHRAL 291
Query: 80 GMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVY 139
+L +M++ GL PN TLSSVL ACA +LG++ HG++ + + FV GLVD+Y
Sbjct: 292 ELLLQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMY 351
Query: 140 RRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWN 199
++G + +AR++FD M +R +I WN
Sbjct: 352 -------------------------------AKHGFLDDARKVFDFMP----RRDLILWN 376
Query: 200 SMISGYVDNSLYDEAFSMFRDLLMRDGIE--PTSFTFGSVLIACADMNSLRKGKEIHALA 257
++ISG + + E S+F + ++G++ T SVL + A ++ +++HALA
Sbjct: 377 ALISGCSHDGRHGEVLSLFHRM-RKEGLDLDVNRTTLASVLKSTASSEAICHTRQVHALA 435
Query: 258 IALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAM 317
+GL SD+ V L++ Y + L A F E + + + + +A+
Sbjct: 436 EKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKESRSDDIISSTTMMTALSQCDHGEDAI 495
Query: 318 QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMY 377
+LF +ML L PD + + +L+AC+SL+ E+GKQVHA+ I+ + SDV G ALV Y
Sbjct: 496 KLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQVHAHLIKRQFTSDVFAGNALVYAY 555
Query: 378 AKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFL 437
AKCGS++ A +A+ + +VS +AM+ A HGHGK + F R+L G P+HI+
Sbjct: 556 AKCGSIEDADMAFSGLPERGIVSWSAMIGGLAQHGHGKRALDLFHRMLDEGVAPNHITLT 615
Query: 438 SALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPM 496
S LSAC HAG + ++F+ M + + + +HY CM+D+L RAG+L +A E + +P
Sbjct: 616 SVLSACNHAGLVDDAKKYFESMKETFGIDRTEEHYACMIDILGRAGKLEDAMELVNNMPF 675
Query: 497 APDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLART 556
++ +WGALLG H + E G++AA++L LEP +G +V+LAN +A AG W ++A+
Sbjct: 676 QANAAVWGALLGASRVHRDPELGRMAAEKLFTLEPEKSGTHVLLANTYASAGMWDEMAKV 735
Query: 557 RQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
R+ MKD + K P SW+E +D++H F D+SH + +IY
Sbjct: 736 RKLMKDSNVKKEPAMSWVEIKDKVHTFIVGDKSHPMTRDIY 776
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 116/437 (26%), Positives = 191/437 (43%), Gaps = 69/437 (15%)
Query: 95 RTLSSVLPACARL---QKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKI 151
RT ++ A AR + L G H ++ ++G ++ N L+ +Y RC + SA
Sbjct: 2 RTPETIGSALARFGTSRSLFAGAHLHSHLLKSGLLAG--FSNHLLTLYSRC-RLPSA--- 55
Query: 152 FSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLY 211
AR +FD++ +SW+S+++ Y +N +
Sbjct: 56 ---------------------------ARAVFDEIP----DPCHVSWSSLVTAYSNNGMP 84
Query: 212 DEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGA 271
+A FR + R G+ F VL D +R G ++HALA+A L D FV A
Sbjct: 85 RDALLAFRAMRGR-GVPCNEFALPVVLKCAPD---VRFGAQVHALAVATRLVHDVFVANA 140
Query: 272 LVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAM-------------- 317
LV +Y + + A+ FDE + G E N +WN M
Sbjct: 141 LVAVYGGFGMVDEARRMFDEYVGV----------GGERNAVSWNTMISAYVKNDQSGDAI 190
Query: 318 QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMY 377
+F EM+ P+ + +++AC+ +E G+QVH +R GY+ DV ALVDMY
Sbjct: 191 GVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALVDMY 250
Query: 378 AKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFL 437
+K G ++ A ++++ D+VS NA ++ HGH + ++ +SG P+ +
Sbjct: 251 SKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLS 310
Query: 438 SALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMA 497
S L AC AG+ G + M +VD+ ++ G L +A + +P
Sbjct: 311 SVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRR 370
Query: 498 PDSVMWGALLGGCVSHG 514
D ++W AL+ GC G
Sbjct: 371 -DLILWNALISGCSHDG 386
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 98/380 (25%), Positives = 164/380 (43%), Gaps = 43/380 (11%)
Query: 57 PNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEF 116
P VSWS+++ ++ NG +A+ M+ G+ N L VL CA + G +
Sbjct: 66 PCHVSWSSLVTAYSNNGMPRDALLAFRAMRGRGVPCNEFALPVVLK-CA--PDVRFGAQV 122
Query: 117 HGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKF----SIKNEVSCNTIIVGYCE 172
H + + FV N LV VY G + A ++F ++ +N VS NT+I Y +
Sbjct: 123 HALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAYVK 182
Query: 173 NGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSF 232
N +A +F +M W+ G P F
Sbjct: 183 NDQSGDAIGVFREM----------VWS--------------------------GERPNEF 206
Query: 233 TFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI 292
F V+ AC L G+++H + G + D F ALV+MY + D+ A F+++
Sbjct: 207 GFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALVDMYSKLGDIEMAATVFEKM 266
Query: 293 ENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGK 352
+ + G + + A++L +M S L P+++T+ +L AC+ G+
Sbjct: 267 PAADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKACAGAGAFNLGR 326
Query: 353 QVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHG 412
Q+H + ++ D D + LVDMYAK G L AR + + DL+ NA+++ + G
Sbjct: 327 QIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDLILWNALISGCSHDG 386
Query: 413 HGKEGIAHFRRILASGFRPD 432
E ++ F R+ G D
Sbjct: 387 RHGEVLSLFHRMRKEGLDLD 406
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/389 (25%), Positives = 165/389 (42%), Gaps = 75/389 (19%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G LDDA+KVF MP RD + WN++++ C
Sbjct: 350 MYAKHGFLDDARKVFDFMPRRDLILWNALISGC--------------------------- 382
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEG--LEPNARTLSSVLPACARLQKLSLGKEFHG 118
+ +G E + + RM+ EG L+ N TL+SVL + A + + ++ H
Sbjct: 383 ---------SHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQVHA 433
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
+ G +S+ V+NGL+D Y +CG + A+K+F + + +S T++ + + +
Sbjct: 434 LAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKESRSDDIISSTTMMTALSQCDHGED 493
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
A +LF QM +R G+EP SF S+L
Sbjct: 494 AIKLFVQM------------------------------------LRKGLEPDSFVLSSLL 517
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
AC +++ +GK++HA I SD F G ALV Y + + A MAF + +
Sbjct: 518 NACTSLSAYEQGKQVHAHLIKRQFTSDVFAGNALVYAYAKCGSIEDADMAFSGLPERGIV 577
Query: 299 LGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ-VHAY 357
G + + A+ LF ML + P+ T+ +LSAC+ ++ K+ +
Sbjct: 578 SWSAMIGGLAQHGHGKRALDLFHRMLDEGVAPNHITLTSVLSACNHAGLVDDAKKYFESM 637
Query: 358 AIRCGYDSDVHIGTALVDMYAKCGSLKHA 386
G D ++D+ + G L+ A
Sbjct: 638 KETFGIDRTEEHYACMIDILGRAGKLEDA 666
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 96/225 (42%), Gaps = 9/225 (4%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y KCGS++DA F +PER VSW++++ A +G AL+ RM + PN ++
Sbjct: 555 YAKCGSIEDADMAFSGLPERGIVSWSAMIGGLAQHGHGKRALDLFHRMLD-EGVAPNHIT 613
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
++V+ G ++A M+ G++ + ++ R KL E +
Sbjct: 614 LTSVLSACNHAGLVDDAKKYFESMKETFGIDRTEEHYACMIDILGRAGKLEDAMEL---V 670
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDM-LSALKIFSKFSIKNEVSCNTIIVG--YCENGNVA 177
F +N V L+ R D L + F+++ E S +++ Y G
Sbjct: 671 NNMPFQANAAVWGALLGASRVHRDPELGRMAAEKLFTLEPEKSGTHVLLANTYASAGMWD 730
Query: 178 EARELFDQMEHLGVQR-GIISWNSMISGYVDNSLYDEAFSMFRDL 221
E ++ M+ V++ +SW + + D++ M RD+
Sbjct: 731 EMAKVRKLMKDSNVKKEPAMSWVEIKDKVHTFIVGDKSHPMTRDI 775
>gi|449507426|ref|XP_004163029.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 350 bits (899), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 195/550 (35%), Positives = 303/550 (55%), Gaps = 42/550 (7%)
Query: 57 PNLVSWSAVIGGFTQNGYDEEAIGMLF--RMQAEGLEPNARTLSSVLPACARLQKLSLGK 114
P S++ +I G + +++ ++ + F RM+ GL+PN T + AC+ L + G+
Sbjct: 89 PTEYSFNVMIRGLS-TAWNKSSLALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENGR 147
Query: 115 EFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
H + R G + V + L+ +Y RCG M
Sbjct: 148 MGHCSVIRRGLDEDGHVSHSLITMYARCGKM----------------------------- 178
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTF 234
+AR++FD++ Q+ ++SWNSMISGY EA +FR++ M G +P +
Sbjct: 179 --GDARKVFDEIS----QKDLVSWNSMISGYSKMRHAGEAVGLFREM-MEAGFQPNEMSL 231
Query: 235 GSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIEN 294
SVL AC ++ L+ G + + + + F+G AL+ MY + DLV+A+ FD ++
Sbjct: 232 VSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMKK 291
Query: 295 IENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV 354
+ + G+ N + A++LF +M PD T+ ILSAC+S+ ++ GKQV
Sbjct: 292 KDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQV 351
Query: 355 HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHG 414
YA G+ DV++GTALVDMYAKCGSL +A + + + VS NAM++A A HG
Sbjct: 352 EIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPKKNEVSWNAMISALAFHGQA 411
Query: 415 KEGIAHFRRILASG--FRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHY 471
+E +A F+ ++ G P+ I+F+ LSACVHAG + G F +M+ + + P ++HY
Sbjct: 412 QEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIEHY 471
Query: 472 TCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEP 531
+CMVDL SRAG L EA++F+ +P PD V+ GALLG C N++ + L+ELEP
Sbjct: 472 SCMVDLFSRAGHLEEAWDFVMTMPEKPDEVILGALLGACQKRKNIDISERVMKLLLELEP 531
Query: 532 NNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHD 591
+N+GNYV+ + L+A RW D AR R MK + + K+PGCSWI+ ++H+F A D H
Sbjct: 532 SNSGNYVISSKLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDINSQLHEFHAGDVLHQ 591
Query: 592 RSEEIYTIID 601
EI+ I+D
Sbjct: 592 EWIEIHQILD 601
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 105/411 (25%), Positives = 175/411 (42%), Gaps = 76/411 (18%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +CG + DA+KVF + ++D LV
Sbjct: 171 MYARCGKMGDARKVFDEISQKD------------------------------------LV 194
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+++I G+++ + EA+G+ M G +PN +L SVL AC L L LG ++
Sbjct: 195 SWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFV 254
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
N N F+ + L+ +Y +CGD++SA +IF K++V+ N +I GY +NG
Sbjct: 255 VENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNG------ 308
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+ +EA +F+D+ M P T +L A
Sbjct: 309 -----------------------------MSEEAIKLFQDMRM-SSTAPDQITLIGILSA 338
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA + +L GK++ A G Q D +VG ALV+MY + L A F + +
Sbjct: 339 CASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPKKNEVSW 398
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSL--DLTPDIYTVGIILSACSSLATMERGKQV-HAY 357
+ A+ LF M++ ++P+ T +LSAC ++ G+++ H
Sbjct: 399 NAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMM 458
Query: 358 AIRCGYDSDVHIGTALVDMYAKCGSLKHA-RLAYKRISTPDLVSQNAMLTA 407
+ G + + +VD++++ G L+ A PD V A+L A
Sbjct: 459 SSSFGLVPKIEHYSCMVDLFSRAGHLEEAWDFVMTMPEKPDEVILGALLGA 509
>gi|297743367|emb|CBI36234.3| unnamed protein product [Vitis vinifera]
Length = 906
Score = 350 bits (899), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 207/641 (32%), Positives = 327/641 (51%), Gaps = 73/641 (11%)
Query: 27 NSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQ 86
N++++ G ++EA +M+ D L SW+ ++GG+ + GY +EA+ + RM
Sbjct: 133 NALLSMFVRFGDLVEAWYVFGKMAERD-----LFSWNVLVGGYAKAGYFDEALNLYHRML 187
Query: 87 AEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDML 146
G+ P+ T VL C L L+ G+E H ++ R GF S+ VVN L+ +Y +CGD+
Sbjct: 188 WVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIF 247
Query: 147 SALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMIS--- 203
SA +F + ++ +S N +I GY EN E LF M V +++ S+IS
Sbjct: 248 SARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACE 307
Query: 204 ------------GY-----------VDNSL---------YDEAFSMFRDLLMRD------ 225
GY V+NSL +DEA +F + +D
Sbjct: 308 ALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTA 367
Query: 226 ------------------------GIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALG 261
G+ P T SVL ACA + L KG +H A G
Sbjct: 368 MISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTG 427
Query: 262 LQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFS 321
L S V +L++MY + + + A F I N + G N ++ A+ F
Sbjct: 428 LTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQ 487
Query: 322 EMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCG 381
+M+ L L P+ T+ +LSAC+ + + GK++HA+A+R G D + AL+DMY +CG
Sbjct: 488 QMI-LSLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCG 546
Query: 382 SLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALS 441
++ A + D+ S N +LT YA G G + F +++ S PD I+F S L
Sbjct: 547 RMEPAWNQFNSCEK-DVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLC 605
Query: 442 ACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDS 500
AC +G + G E+F+ M + + + P+LKHY +VDLL RAG L +AYEFIKK+P+ PD
Sbjct: 606 ACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDP 665
Query: 501 VMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKM 560
+WGALL C + N+E G++AA + E++ + G Y++L NL+A +G+W ++AR R+ M
Sbjct: 666 AIWGALLNACRIYQNVELGELAAQHIFEMDTKSVGYYILLCNLYADSGKWDEVARVRKIM 725
Query: 561 KDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
++ R+ PGCSW+E ++H F D H + +EI +++
Sbjct: 726 RENRLTVDPGCSWVEVAGQVHAFLTGDDFHPQIKEINAVLE 766
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 124/492 (25%), Positives = 222/492 (45%), Gaps = 55/492 (11%)
Query: 50 SSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQK 109
SS+ + PN ++I G E+A+ L MQ + T ++L C +
Sbjct: 55 SSITAQNPN-----SLILELCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRA 109
Query: 110 LSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVG 169
S G H Y+++ + N L+ ++ R GD++ A +F K +
Sbjct: 110 ASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMA------------- 156
Query: 170 YCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEP 229
+R + SWN ++ GY +DEA +++ +L GI P
Sbjct: 157 ----------------------ERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWV-GIRP 193
Query: 230 TSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAF 289
+TF VL C + L +G+E+H I G +SD V AL+ MY + D+ +A++ F
Sbjct: 194 DVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVF 253
Query: 290 DEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATME 349
D + + + G+ N ++LF M + PD+ T+ ++SAC +L
Sbjct: 254 DRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDER 313
Query: 350 RGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYA 409
G++VH Y I+ G+ ++V + +L+ M++ G A + + ++ DLVS AM++ Y
Sbjct: 314 LGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYE 373
Query: 410 MHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTG---SEFFD---LMAYYD 463
+G ++ + + + G PD I+ S LSAC G + G EF D L +Y
Sbjct: 374 KNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVI 433
Query: 464 VKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGA-LLGGCVSHGNLEFGQIA 522
V SL +D+ S+ + +A E +IP + + W + +LG +++ + E
Sbjct: 434 VANSL------IDMYSKCRCIDKALEVFHRIP-NKNVISWTSIILGLRLNYRSFEALFFF 486
Query: 523 ADRLIELEPNNT 534
++ L+PN+
Sbjct: 487 QQMILSLKPNSV 498
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 173/427 (40%), Gaps = 112/427 (26%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
M+ G D+A+ VF M +D VSW ++++ NGL
Sbjct: 340 MHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGL---------------------- 377
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
E+A+ M+ EG+ P+ T++SVL ACA L L G H +
Sbjct: 378 --------------PEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFA 423
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R G S V N L+D+Y +C + AL++F + KN +S +II+G N EA
Sbjct: 424 DRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEAL 483
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
F QM I+S ++P S T SVL A
Sbjct: 484 FFFQQM--------ILS-----------------------------LKPNSVTLVSVLSA 506
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA + +L GKEIHA A+ GL D F+ AL++MY R + A F+ E
Sbjct: 507 CARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSCEK------ 560
Query: 301 KMKEDGFEPNVYTWN--------------AMQLFSEMLSLDLTPDIYTVGIILSACSSLA 346
+V +WN A++LF +M+ D+ PD T +L ACS
Sbjct: 561 ---------DVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSG 611
Query: 347 TMERGKQV-----HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST-PDLVS 400
+ G + H + I ++ ++VD+ + G L+ A K++ PD
Sbjct: 612 MVTDGLEYFESMEHKFHIA----PNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAI 667
Query: 401 QNAMLTA 407
A+L A
Sbjct: 668 WGALLNA 674
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 119/292 (40%), Gaps = 41/292 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC +D A +VF +P ++ +SW S++ N EAL
Sbjct: 441 MYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEAL----------------- 483
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
F+ L+PN+ TL SVL ACAR+ LS GKE H +
Sbjct: 484 --------------------FFFQQMILSLKPNSVTLVSVLSACARIGALSCGKEIHAHA 523
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R G + F+ N L+D+Y RCG M A F+ K+ S N ++ GY + G A
Sbjct: 524 LRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSCE-KDVASWNILLTGYAQQGKGGLAV 582
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
ELF +M V I++ S++ + + + F + + I P + SV+
Sbjct: 583 ELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDL 642
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI 292
L E + + D + GAL+ YQ++ ++A I
Sbjct: 643 LGRAGRLEDAYE---FIKKMPIDPDPAIWGALLNACRIYQNVELGELAAQHI 691
>gi|225459429|ref|XP_002284321.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Vitis vinifera]
Length = 700
Score = 350 bits (899), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 200/593 (33%), Positives = 304/593 (51%), Gaps = 48/593 (8%)
Query: 57 PNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEF 116
P + SW+ +I G QNGY E+A+ M RM +PN T++S+LPAC L+ L LGK
Sbjct: 8 PTVNSWNGIISGCVQNGYLEDALDMFSRMLWYPEDPNIITIASILPACTGLKALRLGKAI 67
Query: 117 HGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNE---------------- 160
H ++G + N +V ++D+Y +CG A K+F K KN
Sbjct: 68 HAIALKHGIVGNVYVEGSVIDMYSKCGSYDYAEKVFVKAENKNTAMWNEMIAAYVNEGKV 127
Query: 161 -------------------VSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSM 201
++ NTI+ G+ NG +A EL +M +G++ ++S+N +
Sbjct: 128 EDALGLLRSMQKDGWKPDVITYNTILSGHARNGLKTQAFELLSEMVQMGLKPNVVSFNVL 187
Query: 202 ISGYVDNSLYDEAFSMFRDL-----------LMRDGIEPTSFTFGSVLIACADMNSLRKG 250
ISG+ + L EA +FR + ++ + P T L ACAD+N +G
Sbjct: 188 ISGFQQSGLSYEALKVFRIMQSPSDGCNPNEVLNLSMRPNPITITGALPACADLNLWCQG 247
Query: 251 KEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPN 310
KEIH + G + + FV ALV+MY + D+ +A F I+ + G+ N
Sbjct: 248 KEIHGYTLRNGFEPNIFVSSALVDMYAKCHDMDSANKVFFRIDGRNTVSWNALMAGYIYN 307
Query: 311 VYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVH-I 369
A++LF EML L P T I+ AC +A + G+ +H YA +C D + I
Sbjct: 308 KQPEEALKLFLEMLGEGLQPSSITFMILFPACGDIAAIRFGRGLHGYAAKCQLDELKNAI 367
Query: 370 GTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGF 429
+AL+DMYAKCGS+ A+ + D+ NAM++A+++HG + A F ++ G
Sbjct: 368 ASALIDMYAKCGSILDAKSVFDSEVEKDVPLWNAMISAFSVHGMARNAFAVFVQMELLGI 427
Query: 430 RPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAY 488
PDHI+F+S LSAC G ++ G ++F+ M Y V +L+HYTCMV +L AG L EA
Sbjct: 428 LPDHITFVSLLSACARDGLVEEGWKYFNSMEISYGVAATLEHYTCMVGILGGAGLLDEAL 487
Query: 489 EFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAG 548
+FI+++P PD+ MW LL C H N E G+ AA L ELEP+N NY++L+N++ +G
Sbjct: 488 DFIRQMPYPPDACMWATLLQACRVHSNPEIGERAAKALFELEPDNATNYMLLSNIYVSSG 547
Query: 549 RWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
W R M+ R++ CS++ I F+ + SH EEI D
Sbjct: 548 MWDFAKNLRSFMRGRKLLTIKECSYLTVGSHICTFKGGESSHPELEEILEAWD 600
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 134/468 (28%), Positives = 205/468 (43%), Gaps = 89/468 (19%)
Query: 1 MYGKCGSLDDAKKVFKMMPER-----------------------------------DCVS 25
MY KCGS D A+KVF + D ++
Sbjct: 89 MYSKCGSYDYAEKVFVKAENKNTAMWNEMIAAYVNEGKVEDALGLLRSMQKDGWKPDVIT 148
Query: 26 WNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRM 85
+N++++ A NGL +A E L M + PN+VS++ +I GF Q+G EA+ + M
Sbjct: 149 YNTILSGHARNGLKTQAFELLSEMVQM-GLKPNVVSFNVLISGFQQSGLSYEALKVFRIM 207
Query: 86 QAE------------GLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVN 133
Q+ + PN T++ LPACA L GKE HGY RNGF N FV +
Sbjct: 208 QSPSDGCNPNEVLNLSMRPNPITITGALPACADLNLWCQGKEIHGYTLRNGFEPNIFVSS 267
Query: 134 GLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQR 193
LVD+Y +C DM SA K+F + +N VS N ++ GY N EA +LF +E LG
Sbjct: 268 ALVDMYAKCHDMDSANKVFFRIDGRNTVSWNALMAGYIYNKQPEEALKLF--LEMLG--- 322
Query: 194 GIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEI 253
+G++P+S TF + AC D+ ++R G+ +
Sbjct: 323 -------------------------------EGLQPSSITFMILFPACGDIAAIRFGRGL 351
Query: 254 HALAIALGL-QSDTFVGGALVEMYCRYQDLVAAQMAFD-EIENIENLLGKMKEDGFEPNV 311
H A L + + AL++MY + ++ A+ FD E+E L M F +
Sbjct: 352 HGYAAKCQLDELKNAIASALIDMYAKCGSILDAKSVFDSEVEKDVPLWNAMIS-AFSVHG 410
Query: 312 YTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG-KQVHAYAIRCGYDSDVHIG 370
NA +F +M L + PD T +LSAC+ +E G K ++ I G + +
Sbjct: 411 MARNAFAVFVQMELLGILPDHITFVSLLSACARDGLVEEGWKYFNSMEISYGVAATLEHY 470
Query: 371 TALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNAMLTAYAMHGHGKEG 417
T +V + G L A +++ PD +L A +H + + G
Sbjct: 471 TCMVGILGGAGLLDEALDFIRQMPYPPDACMWATLLQACRVHSNPEIG 518
>gi|359482660|ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Vitis vinifera]
Length = 872
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 207/641 (32%), Positives = 327/641 (51%), Gaps = 73/641 (11%)
Query: 27 NSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQ 86
N++++ G ++EA +M+ D L SW+ ++GG+ + GY +EA+ + RM
Sbjct: 133 NALLSMFVRFGDLVEAWYVFGKMAERD-----LFSWNVLVGGYAKAGYFDEALNLYHRML 187
Query: 87 AEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDML 146
G+ P+ T VL C L L+ G+E H ++ R GF S+ VVN L+ +Y +CGD+
Sbjct: 188 WVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIF 247
Query: 147 SALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMIS--- 203
SA +F + ++ +S N +I GY EN E LF M V +++ S+IS
Sbjct: 248 SARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACE 307
Query: 204 ------------GY-----------VDNSL---------YDEAFSMFRDLLMRD------ 225
GY V+NSL +DEA +F + +D
Sbjct: 308 ALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTA 367
Query: 226 ------------------------GIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALG 261
G+ P T SVL ACA + L KG +H A G
Sbjct: 368 MISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTG 427
Query: 262 LQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFS 321
L S V +L++MY + + + A F I N + G N ++ A+ F
Sbjct: 428 LTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQ 487
Query: 322 EMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCG 381
+M+ L L P+ T+ +LSAC+ + + GK++HA+A+R G D + AL+DMY +CG
Sbjct: 488 QMI-LSLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCG 546
Query: 382 SLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALS 441
++ A + D+ S N +LT YA G G + F +++ S PD I+F S L
Sbjct: 547 RMEPAWNQFNSCEK-DVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLC 605
Query: 442 ACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDS 500
AC +G + G E+F+ M + + + P+LKHY +VDLL RAG L +AYEFIKK+P+ PD
Sbjct: 606 ACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDP 665
Query: 501 VMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKM 560
+WGALL C + N+E G++AA + E++ + G Y++L NL+A +G+W ++AR R+ M
Sbjct: 666 AIWGALLNACRIYQNVELGELAAQHIFEMDTKSVGYYILLCNLYADSGKWDEVARVRKIM 725
Query: 561 KDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
++ R+ PGCSW+E ++H F D H + +EI +++
Sbjct: 726 RENRLTVDPGCSWVEVAGQVHAFLTGDDFHPQIKEINAVLE 766
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 124/492 (25%), Positives = 222/492 (45%), Gaps = 55/492 (11%)
Query: 50 SSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQK 109
SS+ + PN ++I G E+A+ L MQ + T ++L C +
Sbjct: 55 SSITAQNPN-----SLILELCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRA 109
Query: 110 LSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVG 169
S G H Y+++ + N L+ ++ R GD++ A +F K +
Sbjct: 110 ASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMA------------- 156
Query: 170 YCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEP 229
+R + SWN ++ GY +DEA +++ +L GI P
Sbjct: 157 ----------------------ERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWV-GIRP 193
Query: 230 TSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAF 289
+TF VL C + L +G+E+H I G +SD V AL+ MY + D+ +A++ F
Sbjct: 194 DVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVF 253
Query: 290 DEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATME 349
D + + + G+ N ++LF M + PD+ T+ ++SAC +L
Sbjct: 254 DRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDER 313
Query: 350 RGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYA 409
G++VH Y I+ G+ ++V + +L+ M++ G A + + ++ DLVS AM++ Y
Sbjct: 314 LGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYE 373
Query: 410 MHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTG---SEFFD---LMAYYD 463
+G ++ + + + G PD I+ S LSAC G + G EF D L +Y
Sbjct: 374 KNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVI 433
Query: 464 VKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGA-LLGGCVSHGNLEFGQIA 522
V SL +D+ S+ + +A E +IP + + W + +LG +++ + E
Sbjct: 434 VANSL------IDMYSKCRCIDKALEVFHRIP-NKNVISWTSIILGLRLNYRSFEALFFF 486
Query: 523 ADRLIELEPNNT 534
++ L+PN+
Sbjct: 487 QQMILSLKPNSV 498
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 173/427 (40%), Gaps = 112/427 (26%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
M+ G D+A+ VF M +D VSW ++++ NGL
Sbjct: 340 MHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGL---------------------- 377
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
E+A+ M+ EG+ P+ T++SVL ACA L L G H +
Sbjct: 378 --------------PEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFA 423
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R G S V N L+D+Y +C + AL++F + KN +S +II+G N EA
Sbjct: 424 DRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEAL 483
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
F QM I+S ++P S T SVL A
Sbjct: 484 FFFQQM--------ILS-----------------------------LKPNSVTLVSVLSA 506
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA + +L GKEIHA A+ GL D F+ AL++MY R + A F+ E
Sbjct: 507 CARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSCEK------ 560
Query: 301 KMKEDGFEPNVYTWN--------------AMQLFSEMLSLDLTPDIYTVGIILSACSSLA 346
+V +WN A++LF +M+ D+ PD T +L ACS
Sbjct: 561 ---------DVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSG 611
Query: 347 TMERGKQV-----HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST-PDLVS 400
+ G + H + I ++ ++VD+ + G L+ A K++ PD
Sbjct: 612 MVTDGLEYFESMEHKFHIA----PNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAI 667
Query: 401 QNAMLTA 407
A+L A
Sbjct: 668 WGALLNA 674
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 119/292 (40%), Gaps = 41/292 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC +D A +VF +P ++ +SW S++ N EAL
Sbjct: 441 MYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEAL----------------- 483
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
F+ L+PN+ TL SVL ACAR+ LS GKE H +
Sbjct: 484 --------------------FFFQQMILSLKPNSVTLVSVLSACARIGALSCGKEIHAHA 523
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R G + F+ N L+D+Y RCG M A F+ K+ S N ++ GY + G A
Sbjct: 524 LRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSCE-KDVASWNILLTGYAQQGKGGLAV 582
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
ELF +M V I++ S++ + + + F + + I P + SV+
Sbjct: 583 ELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDL 642
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI 292
L E + + D + GAL+ YQ++ ++A I
Sbjct: 643 LGRAGRLEDAYE---FIKKMPIDPDPAIWGALLNACRIYQNVELGELAAQHI 691
>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
Length = 890
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 209/635 (32%), Positives = 314/635 (49%), Gaps = 111/635 (17%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG + A ++F+ M ER N+V
Sbjct: 223 MYSKCGEISLACEIFQKMKER------------------------------------NVV 246
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A+I Q+ EA + +M G+ PNA T S+L +C + L+ G+ H +I
Sbjct: 247 SWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHI 306
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G ++ V N L+ +Y C+ + +AR
Sbjct: 307 SERGLETDVVVANALITMY-------------------------------CKCNCIQDAR 335
Query: 181 ELFDQMEHLGVQRGIISWNSMI-----SGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFG 235
E FD+M +R +ISW++MI SGY D DE F + + + R+G+ P TF
Sbjct: 336 ETFDRMS----KRDVISWSAMIAGYAQSGYQDKESLDEVFQLL-ERMRREGVFPNKVTFM 390
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
S+L AC+ +L +G++IHA +G +SD + A+ MY + + A+ F ++EN
Sbjct: 391 SILKACSVHGALEQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMEN- 449
Query: 296 ENLLG------------------KMKEDGFEPNVYTWNAM--------------QLFSEM 323
+N++ K+ + NV +WN M +L S M
Sbjct: 450 KNVVAWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSM 509
Query: 324 LSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSL 383
PD T+ IL AC +L+ +ERGK VHA A++ G +SD + T+L+ MY+KCG +
Sbjct: 510 KVEGFQPDRVTIISILEACGALSALERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGEV 569
Query: 384 KHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSAC 443
AR + +IS D V+ NAML Y HG G E + F+R+L P+ I+F + +SAC
Sbjct: 570 TEARTVFDKISNRDTVAWNAMLAGYGQHGIGPEAVDLFKRMLKERVPPNEITFTAVISAC 629
Query: 444 VHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVM 502
AG ++ G E F +M + +KP +HY CMVDLL RAG L EA EFI+++P PD +
Sbjct: 630 GRAGLVQEGREIFRIMQEDFRMKPGKQHYGCMVDLLGRAGRLQEAEEFIQRMPCEPDISV 689
Query: 503 WGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKD 562
W ALLG C SH N++ + AA ++ LEP+N YV L+N++A AGRW D + R+ M D
Sbjct: 690 WHALLGACKSHDNVQLAEWAAHHILRLEPSNASVYVTLSNIYAQAGRWDDSTKVRKVMDD 749
Query: 563 RRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
+ + K G S IE IH F A D +H + I+
Sbjct: 750 KGLKKDRGESSIEIDGRIHTFVAEDCAHPEIDSIH 784
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 146/563 (25%), Positives = 239/563 (42%), Gaps = 104/563 (18%)
Query: 3 GKCGSLDDAKKVFKMMPER----DCVSWNSVVTACAANGLVLEALECLERMSSLDNETPN 58
K +D K V K + E D NS++ + G V + RM+ D
Sbjct: 89 AKLRRFEDGKMVHKQLDELGLAIDIYLGNSLINFYSKFGDVASVEQVFRRMTLRD----- 143
Query: 59 LVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHG 118
+V+WS++I + N + +A RM+ +EPN T S+L AC L +E H
Sbjct: 144 VVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEPNRITFLSILKACNNYSMLEKAREIHT 203
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
+ +G ++ V L+ +Y +CG++ A +IF K +N VS II ++ + E
Sbjct: 204 VVKASGMETDVAVATALITMYSKCGEISLACEIFQKMKERNVVSWTAIIQANAQHRKLNE 263
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
A EL+++M ++ GI P + TF S+L
Sbjct: 264 AFELYEKM------------------------------------LQAGISPNAVTFVSLL 287
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE-- 296
+C +L +G+ IH+ GL++D V AL+ MYC+ + A+ FD + +
Sbjct: 288 NSCNTPEALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVI 347
Query: 297 ---NLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ 353
++ + G++ QL M + P+ T IL ACS +E+G+Q
Sbjct: 348 SWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQ 407
Query: 354 VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKR--------------------- 392
+HA + G++SD + TA+ +MYAKCGS+ A + +
Sbjct: 408 IHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMYIKCGD 467
Query: 393 ----------ISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSA 442
+ST ++VS N M+ YA G + + GF+PD ++ +S L A
Sbjct: 468 LTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEA 527
Query: 443 C-----------VHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFI 491
C VHA ++K G E ++A T ++ + S+ GE+ EA
Sbjct: 528 CGALSALERGKLVHAEAVKLGLESDTVVA-----------TSLIGMYSKCGEVTEARTVF 576
Query: 492 KKIPMAPDSVMWGALLGGCVSHG 514
KI D+V W A+L G HG
Sbjct: 577 DKIS-NRDTVAWNAMLAGYGQHG 598
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 123/504 (24%), Positives = 240/504 (47%), Gaps = 78/504 (15%)
Query: 73 GYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVV 132
G +EAI +L ++ GL N+ T ++ CA+L++ GK H + G + ++
Sbjct: 57 GRLKEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLG 116
Query: 133 NGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQ 192
N L++ Y + GD+ S ++F + ++++ V+ +++I Y N + A+A + F++M+
Sbjct: 117 NSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDA--- 173
Query: 193 RGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKE 252
IEP TF S+L AC + + L K +E
Sbjct: 174 ---------------------------------NIEPNRITFLSILKACNNYSMLEKARE 200
Query: 253 IHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVY 312
IH + A G+++D V AL+ MY + ++ A F KMKE NV
Sbjct: 201 IHTVVKASGMETDVAVATALITMYSKCGEISLACEIFQ----------KMKER----NVV 246
Query: 313 TWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYA 358
+W A+ +L+ +ML ++P+ T +L++C++ + RG+++H++
Sbjct: 247 SWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHI 306
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGH-GKEG 417
G ++DV + AL+ MY KC ++ AR + R+S D++S +AM+ YA G+ KE
Sbjct: 307 SERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQSGYQDKES 366
Query: 418 IAH----FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTC 473
+ R+ G P+ ++F+S L AC G+++ G + ++ + T
Sbjct: 367 LDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKVGFESDRSLQTA 426
Query: 474 MVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLI-ELEPN 532
+ ++ ++ G + EA + K+ + V W +LL + G+L +A+++ E+
Sbjct: 427 IFNMYAKCGSIYEAEQVFSKME-NKNVVAWASLLTMYIKCGDL----TSAEKVFSEMSTR 481
Query: 533 NTGNYVMLANLFAYAGRWSDLART 556
N ++ ++ +A +G D+A+
Sbjct: 482 NVVSWNLMIAGYAQSG---DIAKV 502
>gi|147798405|emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]
Length = 748
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 191/515 (37%), Positives = 294/515 (57%), Gaps = 7/515 (1%)
Query: 55 ETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGK 114
E PN W+ +I G + + AI RM G+EPN+ T +L +CA++ GK
Sbjct: 93 EQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGK 152
Query: 115 EFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
+ HG++ + G S+PFV L+++Y + G++ A +FSK S+++ VS +I GY G
Sbjct: 153 QIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRG 212
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTF 234
+ +AR LF+++ R +SWN+MI+GY + ++EA + F+++ R + P T
Sbjct: 213 CLDDARRLFEEIP----VRDAVSWNAMIAGYAQSGRFEEALAFFQEM-KRANVAPNESTM 267
Query: 235 GSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIEN 294
+VL ACA SL G + + GL S+ + AL++MY + DL A+ F+ I
Sbjct: 268 VTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICE 327
Query: 295 IENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV 354
+ + + G+ A+ LF +M ++ P+ T IL AC+ L ++ GK +
Sbjct: 328 KDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWI 387
Query: 355 HAYAIRCGYD-SDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGH 413
HAY + ++ + T+L+DMYAKCG+++ A+ + + L S NAM++ AMHGH
Sbjct: 388 HAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGH 447
Query: 414 GKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYT 472
+ FR++ GF PD I+F+ LSAC HAG ++ G + F M YD+ P L+HY
Sbjct: 448 ANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYG 507
Query: 473 CMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPN 532
CM+DLL RAG EA +K + M PD +WG+LLG C HGN+E G+ AA L ELEP
Sbjct: 508 CMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPE 567
Query: 533 NTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHK 567
N G YV+L+N++A AGRW D+AR R K+ D+ M K
Sbjct: 568 NPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKK 602
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 119/455 (26%), Positives = 206/455 (45%), Gaps = 82/455 (18%)
Query: 99 SVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVD--VYRRCGDMLSALKIFSKFS 156
++L C Q L K+ H I + G + F ++ L++ G++ AL +F
Sbjct: 37 TLLSTCKSFQNL---KQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIE 93
Query: 157 IKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFS 216
N+ NT+I G NS+ S V A
Sbjct: 94 QPNQFIWNTMIRG-----------------------------NSLSSSPVG------AID 118
Query: 217 MFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMY 276
+ +L+ G+EP S+TF +L +CA + + ++GK+IH + LGL+SD FV +L+ MY
Sbjct: 119 FYVRMLLC-GVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMY 177
Query: 277 CRYQDLVAAQMAF------DEIENIENLLG-----------KMKEDGFEPNVYTWNAM-- 317
+ +L A++ F D + + G ++ E+ + +WNAM
Sbjct: 178 AQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIA 237
Query: 318 ------------QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDS 365
F EM ++ P+ T+ +LSAC+ ++E G V ++ G S
Sbjct: 238 GYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGS 297
Query: 366 DVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRIL 425
++ + AL+DMY+KCG L AR ++ I D++S N M+ Y+ KE +A FR++
Sbjct: 298 NLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQ 357
Query: 426 ASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVK----PSLKHYTCMVDLLSRA 481
S P+ ++F+S L AC + G++ G + AY D K + +T ++D+ ++
Sbjct: 358 QSNVEPNDVTFVSILPACAYLGALDLGKW---IHAYIDKKFLGLTNTSLWTSLIDMYAKC 414
Query: 482 GELGEAYEFIKKIPMAPDSV-MWGALLGGCVSHGN 515
G + A + M P S+ W A++ G HG+
Sbjct: 415 GNIEAAKQVFAG--MKPKSLGSWNAMISGLAMHGH 447
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 126/442 (28%), Positives = 195/442 (44%), Gaps = 88/442 (19%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETP--N 58
MY + G L A+ VF RD VS+ +++T G CL+ L E P +
Sbjct: 176 MYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRG-------CLDDARRLFEEIPVRD 228
Query: 59 LVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHG 118
VSW+A+I G+ Q+G EEA+ M+ + PN T+ +VL ACA+ L LG
Sbjct: 229 AVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRS 288
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
+I +G SN +VN L+D+Y +CGD+ A +F K+ +S N +I GY + E
Sbjct: 289 WIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKE 348
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
A LF +M+ + +EP TF S+L
Sbjct: 349 ALALFRKMQ------------------------------------QSNVEPNDVTFVSIL 372
Query: 239 IACADMNSLRKGKEIHALAIA--LGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
ACA + +L GK IHA LGL ++T + +L++MY + ++ AA+ F
Sbjct: 373 PACAYLGALDLGKWIHAYIDKKFLGL-TNTSLWTSLIDMYAKCGNIEAAKQVF------- 424
Query: 297 NLLGKMKEDGFEP-NVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSA 341
G +P ++ +WNAM +LF +M PD T +LSA
Sbjct: 425 --------AGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSA 476
Query: 342 CSSLATMERGKQVHAYAIRCGYDSDV-----HIGTALVDMYAKCGSLKHARLAYKRIS-T 395
CS +E G+Q + + D D+ H G ++D+ + G A K +
Sbjct: 477 CSHAGLVELGRQCFSSMVE---DYDISPKLQHYG-CMIDLLGRAGLFDEAEALMKNMEMK 532
Query: 396 PDLVSQNAMLTAYAMHGHGKEG 417
PD ++L A +HG+ + G
Sbjct: 533 PDGAIWGSLLGACRVHGNVELG 554
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 103/227 (45%), Gaps = 11/227 (4%)
Query: 338 ILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYA--KCGSLKHARLAYKRIST 395
+LS C S + KQ+H+ I+ G + + L++ A G+L +A L ++ I
Sbjct: 38 LLSTCKSFQNL---KQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQ 94
Query: 396 PDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEF 455
P+ N M+ ++ I + R+L G P+ +F L +C G+ + G +
Sbjct: 95 PNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQI 154
Query: 456 FDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
+ ++ +T ++++ ++ GELG A E + D+V + AL+ G G
Sbjct: 155 HGHVLKLGLESDPFVHTSLINMYAQNGELGYA-ELVFSKSSLRDAVSFTALITGYTLRGC 213
Query: 516 LEFGQIAADRLIELEP-NNTGNYVMLANLFAYAGRWSDLARTRQKMK 561
L+ A RL E P + ++ + +A +GR+ + Q+MK
Sbjct: 214 LD----DARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMK 256
>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
Length = 571
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 184/505 (36%), Positives = 282/505 (55%), Gaps = 38/505 (7%)
Query: 97 LSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFS 156
+ S+L ACA +SLG+ HG + N L+D+Y +CG + A+ +F S
Sbjct: 1 MVSILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMS 60
Query: 157 IKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFS 216
+ R +++W S+I+ Y L DEA
Sbjct: 61 V-----------------------------------RTVVTWTSLIAAYAREGLSDEAIR 85
Query: 217 MFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMY 276
+F ++ R+G+ P FT +VL ACA SL GK++H +QS+ FV AL++MY
Sbjct: 86 LFHEM-DREGVSPDIFTITTVLHACACNGSLENGKDVHNYIRENDMQSNIFVCNALMDMY 144
Query: 277 CRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVG 336
+ + A F E+ + + G+ N A+ LF +M+ L++ PD T+
Sbjct: 145 AKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLPNEALSLFGDMV-LEMKPDGTTLA 203
Query: 337 IILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTP 396
IL AC+SLA+++RGK+VH + +R G+ SD + ALVDMY KCG ARL + I T
Sbjct: 204 CILPACASLASLDRGKEVHGHILRNGFFSDQQVANALVDMYVKCGVPVLARLLFDMIPTK 263
Query: 397 DLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFF 456
DL++ M+ Y MHG G I F + +G PD +SF+S L AC H+G + G FF
Sbjct: 264 DLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEVSFISILYACSHSGLLDEGWRFF 323
Query: 457 DLMA-YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
++M +VKP L+HY C+VDLL+R+G+L AY+FIK +P+ PD+ +WGALL GC H +
Sbjct: 324 NVMQDECNVKPKLEHYACIVDLLARSGKLAMAYKFIKSMPIEPDATIWGALLSGCRIHHD 383
Query: 516 LEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIE 575
++ + A+ + ELEP NTG YV+LAN +A A +W ++ + RQK+ R + K+PGCSWIE
Sbjct: 384 VKLAEKVAEHVFELEPENTGYYVLLANTYAEAEKWEEVKKLRQKIGRRGLKKNPGCSWIE 443
Query: 576 DRDEIHKFRASDRSHDRSEEIYTII 600
+ ++H F A + SH ++++I ++
Sbjct: 444 VKSKVHIFLAGNSSHPQAKKIEVLL 468
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 119/416 (28%), Positives = 184/416 (44%), Gaps = 81/416 (19%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG LD A VF +M R +V
Sbjct: 42 MYAKCGVLDGAILVFDLMSVR------------------------------------TVV 65
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+++I + + G +EAI + M EG+ P+ T+++VL ACA L GK+ H YI
Sbjct: 66 TWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDVHNYI 125
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
N SN FV N L+D+Y +CG M A +F + +K+ +S NT+I GY +N
Sbjct: 126 RENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKN------- 178
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
SL +EA S+F D+++ ++P T +L A
Sbjct: 179 ----------------------------SLPNEALSLFGDMVLE--MKPDGTTLACILPA 208
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA + SL +GKE+H + G SD V ALV+MY + V A++ FD I + +
Sbjct: 209 CASLASLDRGKEVHGHILRNGFFSDQQVANALVDMYVKCGVPVLARLLFDMIPTKDLITW 268
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG-KQVHAYAI 359
+ G+ + + NA+ F+EM + PD + IL ACS ++ G + +
Sbjct: 269 TVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEVSFISILYACSHSGLLDEGWRFFNVMQD 328
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST----PDLVSQNAMLTAYAMH 411
C + +VD+ A+ G L +AYK I + PD A+L+ +H
Sbjct: 329 ECNVKPKLEHYACIVDLLARSGKLA---MAYKFIKSMPIEPDATIWGALLSGCRIH 381
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 138/298 (46%), Gaps = 44/298 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGS++DA VF MP +D ++
Sbjct: 143 MYAKCGSMEDANSVFLEMPVKD------------------------------------II 166
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ +IGG+++N EA+ + M E ++P+ TL+ +LPACA L L GKE HG+I
Sbjct: 167 SWNTMIGGYSKNSLPNEALSLFGDMVLE-MKPDGTTLACILPACASLASLDRGKEVHGHI 225
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
RNGF S+ V N LVD+Y +CG + A +F K+ ++ +I GY +G A
Sbjct: 226 LRNGFFSDQQVANALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAI 285
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
F++M G++ +S+ S++ + L DE + F + ++P + ++
Sbjct: 286 TTFNEMRQAGIEPDEVSFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDL 345
Query: 241 CADMNSLRKGKEIHALAI--ALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
A R GK A ++ ++ D + GAL+ + D+ A+ + + +E
Sbjct: 346 LA-----RSGKLAMAYKFIKSMPIEPDATIWGALLSGCRIHHDVKLAEKVAEHVFELE 398
>gi|147770957|emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]
Length = 820
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 203/581 (34%), Positives = 310/581 (53%), Gaps = 51/581 (8%)
Query: 26 WNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRM 85
+N+++ A G + +AL S + +V+W+++I + +A+ + +M
Sbjct: 180 FNNLINLYAKCGCLNQALLLF---SITHHHFKTIVTWTSLITHLSHFNMHLQALSLFNQM 236
Query: 86 QAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDM 145
+ G PN T SS+L A A + G++ H I ++GF +N FV LVD+Y +C DM
Sbjct: 237 RCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCADM 296
Query: 146 LSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGY 205
SA+++F DQM +R ++SWNSMI G+
Sbjct: 297 HSAVRVF-------------------------------DQMP----ERNLVSWNSMIVGF 321
Query: 206 VDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSD 265
N+LYD A +F+D+L + P + SVL ACA+M L G+++H + + GL
Sbjct: 322 FHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPL 381
Query: 266 TFVGGALVEMY--CRYQD--LVAAQMAFDEIENIENLL--GKMKEDGFEPNVYTWNAMQL 319
T+V +L++MY CR+ D + Q D N+L G ++ D FE A
Sbjct: 382 TYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFE------EACNY 435
Query: 320 FSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAK 379
F M + PD + +L + +SLA + +G +H I+ GY ++ I +L+ MYAK
Sbjct: 436 FWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAK 495
Query: 380 CGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSA 439
CGSL A ++ I +++S AM++AY +HG + I F +L+ G P H++F+
Sbjct: 496 CGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCV 555
Query: 440 LSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAP 498
LSAC H G ++ G F+ M +D+ P +HY CMVDLL RAG L EA FI+ +PM P
Sbjct: 556 LSACSHTGRVEEGLAHFNSMKKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKP 615
Query: 499 DSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQ 558
+WGALLG C +GNL+ G+ AA+RL E+EP N GNYV+LAN+ +GR + R+
Sbjct: 616 TPSVWGALLGACRKYGNLKMGREAAERLFEMEPYNPGNYVLLANMCTRSGRLEEANEVRR 675
Query: 559 KMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTI 599
M + K PGCSWI+ ++ F A DRSH S+EIY +
Sbjct: 676 LMGVNGVRKEPGCSWIDVKNMTFVFTAHDRSHSSSDEIYKM 716
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 115/487 (23%), Positives = 217/487 (44%), Gaps = 60/487 (12%)
Query: 97 LSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFS 156
L+ +L + + L + H I N + S PF+ N L+++Y +CG + AL +FS
Sbjct: 145 LNHLLNTAIQTRSLKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSI-- 202
Query: 157 IKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFS 216
H + I++W S+I+ +++ +A S
Sbjct: 203 ----------------------------THHHF---KTIVTWTSLITHLSHFNMHLQALS 231
Query: 217 MFRDLLMR-DGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEM 275
+F MR G P FTF S+L A A + G+++H+L G ++ FVG ALV+M
Sbjct: 232 LFNQ--MRCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDM 289
Query: 276 YCRYQDLVAAQMAFDEIENIENLL--GKMKEDGFEPNVYTWNAMQLFSEML-SLDLTPDI 332
Y + D+ +A FD++ NL+ M F N+Y A+ +F ++L + P+
Sbjct: 290 YAKCADMHSAVRVFDQMPE-RNLVSWNSMIVGFFHNNLYD-RAVGVFKDVLREKTVIPNE 347
Query: 333 YTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKR 392
+V +LSAC+++ + G+QVH ++ G ++ +L+DMY KC ++
Sbjct: 348 VSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQC 407
Query: 393 ISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTG 452
+ D+V+ N ++ + + +E +F + G PD SF + L + ++ G
Sbjct: 408 VGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQG 467
Query: 453 SEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVS 512
+ D + ++ ++ + ++ G L +AY+ + I + + W A++
Sbjct: 468 TAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIE-DHNVISWTAMISAYQL 526
Query: 513 HGNLEFGQIAADRLIEL---------EPNNTGNYVMLANLFAYAGRWSD-LARTRQKMKD 562
HG A+++IEL EP++ +V + + ++ GR + LA K
Sbjct: 527 HG-------CANQVIELFEHMLSEGIEPSHV-TFVCVLSACSHTGRVEEGLAHFNSMKKI 578
Query: 563 RRMHKSP 569
M+ P
Sbjct: 579 HDMNPGP 585
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 122/486 (25%), Positives = 204/486 (41%), Gaps = 112/486 (23%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC + A +VF MPER+ VSWNS+
Sbjct: 289 MYAKCADMHSAVRVFDQMPERNLVSWNSM------------------------------- 317
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFR--MQAEGLEPNARTLSSVLPACARLQKLSLGKEFHG 118
++G F N YD A+G +F+ ++ + + PN ++SSVL ACA + L+ G++ HG
Sbjct: 318 ----IVGFFHNNLYD-RAVG-VFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHG 371
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
+ + G + +V+N L+D+Y +C +K+F ++ V+ N +++G+ +N E
Sbjct: 372 VVVKYGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEE 431
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
A F W ++ R+GI P +F +VL
Sbjct: 432 ACNYF--------------W----------------------VMRREGILPDEASFSTVL 455
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
+ A + +L +G IH I LG + + G+L+ MY + LV A F+ IE
Sbjct: 456 HSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIE----- 510
Query: 299 LGKMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSS 344
+ NV +W AM +LF MLS + P T +LSACS
Sbjct: 511 ---------DHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSH 561
Query: 345 LATMERGKQVHAYAIRCGYDSDV---HIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVS 400
+E G H +++ +D + H +VD+ + G L A+ + + P
Sbjct: 562 TGRVEEG-LAHFNSMKKIHDMNPGPEHYA-CMVDLLGRAGWLDEAKRFIESMPMKPTPSV 619
Query: 401 QNAMLTAYAMHGHGKEGIAHFRRILA-SGFRPDHISFLSALSACVHAGSIKTGSEFFDLM 459
A+L A +G+ K G R+ + P + L+ + C +G ++ +E LM
Sbjct: 620 WGALLGACRKYGNLKMGREAAERLFEMEPYNPGNYVLLANM--CTRSGRLEEANEVRRLM 677
Query: 460 AYYDVK 465
V+
Sbjct: 678 GVNGVR 683
>gi|449436591|ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Cucumis sativus]
Length = 878
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 211/663 (31%), Positives = 338/663 (50%), Gaps = 77/663 (11%)
Query: 9 DDAKKVFKMMPERD---CVSW-NSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSA 64
D+ +V++++ CV N++++ G +L+A +MS D + SW+
Sbjct: 114 DEGSRVYELVSSSKSCLCVRLGNALLSMFVRFGNLLDAWYVFGKMSERD-----VFSWNV 168
Query: 65 VIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNG 124
++GG+ + G +EA+ + RM + PN T SVL CA + ++ GKE H ++ R G
Sbjct: 169 LVGGYAKAGCFDEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFG 228
Query: 125 FMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFD 184
F S+ V N L+ +Y +CGD+ +A +F K ++ +S N +I GY ENG E ELF
Sbjct: 229 FESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFS 288
Query: 185 QMEHLGVQRGIISWNSMIS---------------GYV-----------DNSL-------- 210
M L V +I+ ++ S GYV +NSL
Sbjct: 289 MMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLG 348
Query: 211 -YDEAFSMFRDLLMRD------------------------------GIEPTSFTFGSVLI 239
+EA ++F + +D GI P T SVL
Sbjct: 349 RLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLS 408
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
ACA + L G +H +AI GL S V +L++MY + + + A F I +
Sbjct: 409 ACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVS 468
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
G N ++ A+ F +M + P+ T+ +LSAC+ + + RGK++HA+A+
Sbjct: 469 WTSLILGLRINNRSFEALLFFRQMKE-SMKPNSVTLISVLSACARIGALMRGKEIHAHAL 527
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
R G D + A++DMY +CG K L D+ + N +LT YA G K +
Sbjct: 528 RTGVGFDGFLPNAILDMYVRCGR-KVPALNQFNSQKKDVTAWNILLTGYAQQGQAKLAVE 586
Query: 420 HFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLL 478
F ++L PD I+F+S L AC +G + G E+F++M Y++ P+LKHY C+VD+L
Sbjct: 587 LFDKMLELEIHPDEITFISLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDIL 646
Query: 479 SRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYV 538
RAG+L +AY+FI+ +P+ PD+ +WGALL C H N+E G+IAA R+ E + + G Y+
Sbjct: 647 GRAGQLDDAYDFIQDMPIRPDAAIWGALLNACRIHRNVELGEIAAKRVFEKDNKSVGYYI 706
Query: 539 MLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYT 598
+L NL+A G W +++ R M++R + PGCSW+E + ++H F + D SH +S+EI
Sbjct: 707 LLCNLYAGCGNWDKVSKVRSLMRERGLSADPGCSWVEIKGKVHAFLSGDNSHSQSKEING 766
Query: 599 IID 601
++D
Sbjct: 767 VLD 769
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 128/494 (25%), Positives = 207/494 (41%), Gaps = 109/494 (22%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG + +A+ +F MP+RD +SWN++++ NG LE LE M L + P+L+
Sbjct: 242 MYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVD-PDLI 300
Query: 61 SWSAV------------------------IGG-----------FTQNGYDEEAIGMLFRM 85
+ + V GG ++ G EEA + RM
Sbjct: 301 TMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRM 360
Query: 86 QA-------------------------------EGLEPNARTLSSVLPACARLQKLSLGK 114
++ EG+ P+ TL SVL ACA + L LG
Sbjct: 361 ESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGI 420
Query: 115 EFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
H + G +S+ V N L+D+Y +C + +AL++F S KN VS ++I+G N
Sbjct: 421 RLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINN 480
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTF 234
EA F Q M++ ++P S T
Sbjct: 481 RSFEALLFFRQ-------------------------------------MKESMKPNSVTL 503
Query: 235 GSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIEN 294
SVL ACA + +L +GKEIHA A+ G+ D F+ A+++MY R V A F+ +
Sbjct: 504 ISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQFNS-QK 562
Query: 295 IENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV 354
+ + G+ A++LF +ML L++ PD T +L ACS + G +
Sbjct: 563 KDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSKSGMVTEGLE- 621
Query: 355 HAYAIRCGYDSDVHIG--TALVDMYAKCGSLKHARLAYKRIST-PDLVSQNAMLTAYAMH 411
+ ++ Y+ ++ +VD+ + G L A + + PD A+L A +H
Sbjct: 622 YFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAAIWGALLNACRIH 681
Query: 412 GHGKEGIAHFRRIL 425
+ + G +R+
Sbjct: 682 RNVELGEIAAKRVF 695
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 101/233 (43%), Gaps = 5/233 (2%)
Query: 282 LVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSA 341
+V A ++ I+ +NL +++E + N+ AM+ ML L + + +L
Sbjct: 51 VVGAAVSHSAIDQTQNL--ELRELCLQGNLE--QAMKRLESMLELRIEVEEDAYIALLRL 106
Query: 342 CSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQ 401
C + G +V+ V +G AL+ M+ + G+L A + ++S D+ S
Sbjct: 107 CEWRRAPDEGSRVYELVSSSKSCLCVRLGNALLSMFVRFGNLLDAWYVFGKMSERDVFSW 166
Query: 402 NAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY 461
N ++ YA G E + + R+L + RP+ +F S L C I G E +
Sbjct: 167 NVLVGGYAKAGCFDEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIR 226
Query: 462 YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
+ + + ++ + + G++ A K+P D + W A++ G +G
Sbjct: 227 FGFESDVDVGNALITMYVKCGDISNARMLFDKMP-KRDRISWNAMISGYFENG 278
>gi|449491114|ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g15510, chloroplastic-like [Cucumis sativus]
Length = 878
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 211/663 (31%), Positives = 338/663 (50%), Gaps = 77/663 (11%)
Query: 9 DDAKKVFKMMPERD---CVSW-NSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSA 64
D+ +V++++ CV N++++ G +L+A +MS D + SW+
Sbjct: 114 DEGSRVYELVSSSKSCLCVRLGNALLSMFVRFGNLLDAWYVFGKMSERD-----VFSWNV 168
Query: 65 VIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNG 124
++GG+ + G +EA+ + RM + PN T SVL CA + ++ GKE H ++ R G
Sbjct: 169 LVGGYAKAGCFDEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFG 228
Query: 125 FMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFD 184
F S+ V N L+ +Y +CGD+ +A +F K ++ +S N +I GY ENG E ELF
Sbjct: 229 FESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFS 288
Query: 185 QMEHLGVQRGIISWNSMIS---------------GYV-----------DNSL-------- 210
M L V +I+ ++ S GYV +NSL
Sbjct: 289 MMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLG 348
Query: 211 -YDEAFSMFRDLLMRD------------------------------GIEPTSFTFGSVLI 239
+EA ++F + +D GI P T SVL
Sbjct: 349 RLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLS 408
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
ACA + L G +H +AI GL S V +L++MY + + + A F I +
Sbjct: 409 ACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVS 468
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
G N ++ A+ F +M + P+ T+ +LSAC+ + + RGK++HA+A+
Sbjct: 469 WTSLILGLRINNRSFEALLFFRQMKE-SMKPNSVTLISVLSACARIGALMRGKEIHAHAL 527
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
R G D + A++DMY +CG K L D+ + N +LT YA G K +
Sbjct: 528 RTGVGFDGFLPNAILDMYVRCGR-KVPALNQFNSQKKDVTAWNILLTGYAQQGQAKLAVE 586
Query: 420 HFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLL 478
F ++L PD I+F+S L AC +G + G E+F++M Y++ P+LKHY C+VD+L
Sbjct: 587 LFDKMLELEIHPDEITFISLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDIL 646
Query: 479 SRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYV 538
RAG+L +AY+FI+ +P+ PD+ +WGALL C H N+E G+IAA R+ E + + G Y+
Sbjct: 647 GRAGQLDDAYDFIQDMPIRPDAAIWGALLNACRIHRNVELGEIAAKRVFEKDNKSVGYYI 706
Query: 539 MLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYT 598
+L NL+A G W +++ R M++R + PGCSW+E + ++H F + D SH +S+EI
Sbjct: 707 LLCNLYAGCGNWDKVSKVRSLMRERGLSADPGCSWVEIKGKVHAFLSGDNSHSQSKEING 766
Query: 599 IID 601
++D
Sbjct: 767 VLD 769
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 128/494 (25%), Positives = 207/494 (41%), Gaps = 109/494 (22%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG + +A+ +F MP+RD +SWN++++ NG LE LE M L + P+L+
Sbjct: 242 MYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVD-PDLI 300
Query: 61 SWSAV------------------------IGG-----------FTQNGYDEEAIGMLFRM 85
+ + V GG ++ G EEA + RM
Sbjct: 301 TMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRM 360
Query: 86 QA-------------------------------EGLEPNARTLSSVLPACARLQKLSLGK 114
++ EG+ P+ TL SVL ACA + L LG
Sbjct: 361 ESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGI 420
Query: 115 EFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
H + G +S+ V N L+D+Y +C + +AL++F S KN VS ++I+G N
Sbjct: 421 RLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINN 480
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTF 234
EA F Q M++ ++P S T
Sbjct: 481 RSFEALLFFRQ-------------------------------------MKESMKPNSVTL 503
Query: 235 GSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIEN 294
SVL ACA + +L +GKEIHA A+ G+ D F+ A+++MY R V A F+ +
Sbjct: 504 ISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQFNS-QK 562
Query: 295 IENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV 354
+ + G+ A++LF +ML L++ PD T +L ACS + G +
Sbjct: 563 KDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSKSGMVTEGLE- 621
Query: 355 HAYAIRCGYDSDVHIG--TALVDMYAKCGSLKHARLAYKRIST-PDLVSQNAMLTAYAMH 411
+ ++ Y+ ++ +VD+ + G L A + + PD A+L A +H
Sbjct: 622 YFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAAIWGALLNACRIH 681
Query: 412 GHGKEGIAHFRRIL 425
+ + G +R+
Sbjct: 682 RNVELGEIAAKRVF 695
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 101/233 (43%), Gaps = 5/233 (2%)
Query: 282 LVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSA 341
+V A ++ I+ +NL +++E + N+ AM+ ML L + + +L
Sbjct: 51 VVGAAVSHSAIDQTQNL--ELRELCLQGNLE--QAMKRLESMLELRIEVEEDAYIALLRL 106
Query: 342 CSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQ 401
C + G +V+ V +G AL+ M+ + G+L A + ++S D+ S
Sbjct: 107 CEWRRAPDEGSRVYELVSSSKSCLCVRLGNALLSMFVRFGNLLDAWYVFGKMSERDVFSW 166
Query: 402 NAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY 461
N ++ YA G E + + R+L + RP+ +F S L C I G E +
Sbjct: 167 NVLVGGYAKAGCFDEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIR 226
Query: 462 YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
+ + + ++ + + G++ A K+P D + W A++ G +G
Sbjct: 227 FGFESDVDVGNALITMYVKCGDISNARMLFDKMP-KRDRISWNAMISGYFENG 278
>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 703
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 189/537 (35%), Positives = 296/537 (55%), Gaps = 37/537 (6%)
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A+I G+ ++ + E+A+ + M EG++PNA T +L ACA L L GKE H I
Sbjct: 96 SWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTYMIILKACASLSALKWGKEVHACI 155
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
G S+ V L+ +Y +CG ++ EAR
Sbjct: 156 RHGGLESDVRVGTALLRMYGKCG-------------------------------SINEAR 184
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+FD + + IISW MI Y + EA+ + + ++G +P + T+ S+L A
Sbjct: 185 RIFDNL----MNHDIISWTVMIGAYAQSGNGKEAYRLMLQM-EQEGFKPNAITYVSILNA 239
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA +L+ K +H A+ GL+ D VG ALV+MY + + A++ FD ++ + +
Sbjct: 240 CASEGALKWVKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSW 299
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
+ F + A LF +M + PD IL+AC+S +E K++H +A+
Sbjct: 300 NVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALD 359
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
G + DV +GTALV MY+K GS+ AR+ + R+ ++VS NAM++ A HG G++ +
Sbjct: 360 SGLEVDVRVGTALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEV 419
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTG-SEFFDLMAYYDVKPSLKHYTCMVDLLS 479
FRR+ A G +PD ++F++ LSAC HAG + G S++ + Y ++P + H CMVDLL
Sbjct: 420 FRRMTAHGVKPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLG 479
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
RAG L EA FI + + PD WGALLG C ++GN+E G++ A ++L+P N YV+
Sbjct: 480 RAGRLMEAKLFIDNMAVDPDEATWGALLGSCRTYGNVELGELVAKERLKLDPKNAATYVL 539
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEI 596
L+N++A AG+W ++ R M++R + K PG SWIE ++IH F +D SH +EI
Sbjct: 540 LSNIYAEAGKWDMVSWVRTMMRERGIRKEPGRSWIEVDNKIHDFLVADSSHPECKEI 596
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 132/445 (29%), Positives = 224/445 (50%), Gaps = 38/445 (8%)
Query: 70 TQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNP 129
T N E + ++ R+Q GL ++ VL C + + L K+ H I ++ N
Sbjct: 5 TANTLSEAIVVLMNRLQ-RGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNA 63
Query: 130 FVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHL 189
V+N L+ VY CG + EAR +FD +
Sbjct: 64 HVMNNLLHVYIECG-------------------------------RLQEARCVFDAL--- 89
Query: 190 GVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRK 249
V++ SWN+MI+GYV++ ++A +FR++ +G++P + T+ +L ACA +++L+
Sbjct: 90 -VKKSGASWNAMIAGYVEHKHAEDAMRLFREMC-HEGVQPNAGTYMIILKACASLSALKW 147
Query: 250 GKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEP 309
GKE+HA GL+SD VG AL+ MY + + A+ FD + N + + + +
Sbjct: 148 GKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMNHDIISWTVMIGAYAQ 207
Query: 310 NVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHI 369
+ A +L +M P+ T IL+AC+S ++ K+VH +A+ G + DV +
Sbjct: 208 SGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKRVHRHALDAGLELDVRV 267
Query: 370 GTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGF 429
GTALV MYAK GS+ AR+ + R+ D+VS N M+ A+A HG G E F ++ G
Sbjct: 268 GTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGC 327
Query: 430 RPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYE 489
+PD I FLS L+AC AG+++ + ++ ++ T +V + S++G + +A
Sbjct: 328 KPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEVDVRVGTALVHMYSKSGSIDDARV 387
Query: 490 FIKKIPMAPDSVMWGALLGGCVSHG 514
++ + + V W A++ G HG
Sbjct: 388 VFDRMKV-RNVVSWNAMISGLAQHG 411
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 91/318 (28%), Positives = 156/318 (49%), Gaps = 5/318 (1%)
Query: 213 EAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGAL 272
EA + + L R G+ SF + VL C L K++H I ++ + V L
Sbjct: 11 EAIVVLMNRLQR-GLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNL 69
Query: 273 VEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDI 332
+ +Y L A+ FD + G+ + + +AM+LF EM + P+
Sbjct: 70 LHVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNA 129
Query: 333 YTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKR 392
T IIL AC+SL+ ++ GK+VHA G +SDV +GTAL+ MY KCGS+ AR +
Sbjct: 130 GTYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDN 189
Query: 393 ISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTG 452
+ D++S M+ AYA G+GKE ++ GF+P+ I+++S L+AC G++K
Sbjct: 190 LMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWV 249
Query: 453 SEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVS 512
++ ++ T +V + +++G + +A ++ + D V W ++G
Sbjct: 250 KRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKV-RDVVSWNVMIGAFAE 308
Query: 513 HGNLEFGQIAADRLIELE 530
HG G A D ++++
Sbjct: 309 HGR---GHEAYDLFLQMQ 323
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 130/294 (44%), Gaps = 65/294 (22%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWN--------------------------------- 27
MYGKCGS+++A+++F + D +SW
Sbjct: 173 MYGKCGSINEARRIFDNLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAIT 232
Query: 28 --SVVTACAANGLV----------LEA------------LECLERMSSLDN--------E 55
S++ ACA+ G + L+A ++ + S+D+ +
Sbjct: 233 YVSILNACASEGALKWVKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMK 292
Query: 56 TPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKE 115
++VSW+ +IG F ++G EA + +MQ EG +P+A S+L ACA L K+
Sbjct: 293 VRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKK 352
Query: 116 FHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGN 175
H + +G + V LV +Y + G + A +F + ++N VS N +I G ++G
Sbjct: 353 IHRHALDSGLEVDVRVGTALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGL 412
Query: 176 VAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEP 229
+A E+F +M GV+ +++ +++S L DE S + + GIEP
Sbjct: 413 GQDALEVFRRMTAHGVKPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEP 466
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 102/244 (41%), Gaps = 69/244 (28%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWN--------------------------------- 27
MY K GS+DDA+ VF M RD VSWN
Sbjct: 274 MYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIM 333
Query: 28 --SVVTACAANGLVLEALECLERMS-----------------------SLDN-------- 54
S++ ACA+ G LE ++ + R + S+D+
Sbjct: 334 FLSILNACASAG-ALEWVKKIHRHALDSGLEVDVRVGTALVHMYSKSGSIDDARVVFDRM 392
Query: 55 ETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGK 114
+ N+VSW+A+I G Q+G ++A+ + RM A G++P+ T +VL AC+ + G+
Sbjct: 393 KVRNVVSWNAMISGLAQHGLGQDALEVFRRMTAHGVKPDRVTFVAVLSACSHAGLVDEGR 452
Query: 115 EFHGYITR-NGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCEN 173
+ +T+ G + N +VD+ R G ++ A ++ + + ++G C
Sbjct: 453 SQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKLFIDNMAVDPDEATWGALLGSCRT 512
Query: 174 -GNV 176
GNV
Sbjct: 513 YGNV 516
>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 908
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 212/612 (34%), Positives = 297/612 (48%), Gaps = 102/612 (16%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGS+DDA+ VF M +RD ++
Sbjct: 278 MYAKCGSIDDARLVFDGMCDRD------------------------------------VI 301
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A+IGG QNG EA + +MQ EG P++ T S+L KE H +
Sbjct: 302 SWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHA 361
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
G +S+ V + V +Y RCG + A IF K ++
Sbjct: 362 VEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAV----------------------- 398
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
R + +WN+MI G EA S+F + R+G P + TF ++L A
Sbjct: 399 ------------RNVTTWNAMIGGVAQQKCGREALSLFLQM-RREGFFPDATTFVNILSA 445
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
+L KE+H+ AI GL D VG ALV MY + + + A+ FD
Sbjct: 446 NVGEEALEWVKEVHSYAIDAGL-VDLRVGNALVHMYAKCGNTMYAKQVFD---------- 494
Query: 301 KMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSSLA 346
D E NV TW M LF +ML + PD T ILSAC+S
Sbjct: 495 ----DMVERNVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVPDATTYVSILSACASTG 550
Query: 347 TMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLT 406
+E K+VH++A+ G SD+ +G ALV MYAKCGS+ AR + + D+ S M+
Sbjct: 551 ALEWVKEVHSHAVNAGLVSDLRVGNALVHMYAKCGSVDDARRVFDDMLERDVYSWTVMIG 610
Query: 407 AYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGS-EFFDLMAYYDVK 465
A HG G + + F ++ GF+P+ SF++ LSAC HAG + G +F L Y ++
Sbjct: 611 GLAQHGRGLDALDLFVKMKLEGFKPNGYSFVAVLSACSHAGLVDEGRRQFLSLTQDYGIE 670
Query: 466 PSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADR 525
P+++HYTCMVDLL RAG+L EA FI +P+ P WGALLG CV++GNLE + AA
Sbjct: 671 PTMEHYTCMVDLLGRAGQLEEAKHFILNMPIEPGDAPWGALLGACVTYGNLEMAEFAAKE 730
Query: 526 LIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRA 585
++L+P + YV+L+N++A G W R M+ R + K PG SWIE ++IH F
Sbjct: 731 RLKLKPKSASTYVLLSNIYAATGNWEQKLLVRSMMQRRGIRKEPGRSWIEVDNQIHSFVV 790
Query: 586 SDRSHDRSEEIY 597
D SH S+EIY
Sbjct: 791 GDTSHPESKEIY 802
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 137/447 (30%), Positives = 217/447 (48%), Gaps = 39/447 (8%)
Query: 65 VIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNG 124
+IGG+ + GY E+A+ + +M+ EG +PN T S+L AC L GK+ H +I ++G
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60
Query: 125 FMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFD 184
F S+ V LV++Y +CG ++ +A+ +FD
Sbjct: 61 FQSDVRVETALVNMYVKCG-------------------------------SIDDAQLIFD 89
Query: 185 QMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADM 244
+M V+R +ISW MI G EAF F + R+G P S+T+ S+L A A
Sbjct: 90 KM----VERNVISWTVMIGGLAHYGRGQEAFHRFLQM-QREGFIPNSYTYVSILNANASA 144
Query: 245 NSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKE 304
+L KE+H+ A+ GL D VG ALV MY + + A++ FD + + +
Sbjct: 145 GALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMVERDIFSWTVMI 204
Query: 305 DGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIIL--SACSSLATMERGKQVHAYAIRCG 362
G + A LF +M P++ T IL SA +S +E K+VH +A + G
Sbjct: 205 GGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILNASAITSTGALEWVKEVHKHAGKAG 264
Query: 363 YDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFR 422
+ SD+ +G AL+ MYAKCGS+ ARL + + D++S NAM+ A +G G E F
Sbjct: 265 FISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNGCGHEAFTIFL 324
Query: 423 RILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAG 482
++ GF PD ++LS L+ V G+ + E + L+ + V + R G
Sbjct: 325 KMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCG 384
Query: 483 ELGEAYEFIKKIPMAPDSVMWGALLGG 509
+ +A K+ + + W A++GG
Sbjct: 385 SIDDAQLIFDKLAV-RNVTTWNAMIGG 410
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 158/595 (26%), Positives = 236/595 (39%), Gaps = 133/595 (22%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGS+DDA+ +F M ER N++
Sbjct: 74 MYVKCGSIDDAQLIFDKMVER------------------------------------NVI 97
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ +IGG G +EA +MQ EG PN+ T S+L A A L KE H +
Sbjct: 98 SWTVMIGGLAHYGRGQEAFHRFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHA 157
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
G + V N LV +Y + G + A +F ++ S +I G ++G EA
Sbjct: 158 VNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAF 217
Query: 181 ELFDQMEHLG-----------------VQRGIISW--------------------NSMIS 203
LF QME G G + W N++I
Sbjct: 218 SLFLQMERGGCLPNLTTYLSILNASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIH 277
Query: 204 GYVDNSLYDEAFSMF-----RDL-------------------------LMRDGIEPTSFT 233
Y D+A +F RD+ + ++G P S T
Sbjct: 278 MYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTT 337
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
+ S+L + KE+H A+ +GL SD VG A V MY R + AQ+ FD++
Sbjct: 338 YLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLA 397
Query: 294 NIENLLGKMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIIL 339
NV TWNAM LF +M PD T IL
Sbjct: 398 --------------VRNVTTWNAMIGGVAQQKCGREALSLFLQMRREGFFPDATTFVNIL 443
Query: 340 SACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLV 399
SA +E K+VH+YAI G D+ +G ALV MYAKCG+ +A+ + + ++
Sbjct: 444 SANVGEEALEWVKEVHSYAIDAGL-VDLRVGNALVHMYAKCGNTMYAKQVFDDMVERNVT 502
Query: 400 SQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM 459
+ M++ A HG G E + F ++L G PD +++S LSAC G+++ E
Sbjct: 503 TWTVMISGLAQHGCGHEAFSLFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHSHA 562
Query: 460 AYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
+ L+ +V + ++ G + +A + + D W ++GG HG
Sbjct: 563 VNAGLVSDLRVGNALVHMYAKCGSVDDARRVFDDM-LERDVYSWTVMIGGLAQHG 616
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 169/371 (45%), Gaps = 41/371 (11%)
Query: 201 MISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIAL 260
MI GY + ++A ++ + R+G +P T+ S+L AC SL+ GK+IHA I
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQM-RREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQS 59
Query: 261 GLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAM--- 317
G QSD V ALV MY + + AQ+ FD++ E NV +W M
Sbjct: 60 GFQSDVRVETALVNMYVKCGSIDDAQLIFDKM--------------VERNVISWTVMIGG 105
Query: 318 -----------QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSD 366
F +M P+ YT IL+A +S +E K+VH++A+ G D
Sbjct: 106 LAHYGRGQEAFHRFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALD 165
Query: 367 VHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILA 426
+ +G ALV MYAK GS+ AR+ + + D+ S M+ A HG G+E + F ++
Sbjct: 166 LRVGNALVHMYAKSGSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMER 225
Query: 427 SGFRPDHISFLSAL--SACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGEL 484
G P+ ++LS L SA G+++ E L+ ++ + ++ G +
Sbjct: 226 GGCLPNLTTYLSILNASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSI 285
Query: 485 GEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELE-----PNNTGNYVM 539
+A + D + W A++GG +G G A ++++ P++T Y+
Sbjct: 286 DDA-RLVFDGMCDRDVISWNAMIGGLAQNG---CGHEAFTIFLKMQQEGFVPDST-TYLS 340
Query: 540 LANLFAYAGRW 550
L N G W
Sbjct: 341 LLNTHVSTGAW 351
>gi|326522488|dbj|BAK07706.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 799
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 211/631 (33%), Positives = 328/631 (51%), Gaps = 44/631 (6%)
Query: 4 KCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWS 63
K G + A+ +F MPER VS+ ++V A G V EA+E E+ S ++ ++
Sbjct: 164 KAGDIASARGLFDGMPERSVVSYTTMVDALMKRGRVAEAVELYEQCPS-----GSVAFFT 218
Query: 64 AVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY-ITR 122
A I GF +N A+G+ +M + G+ PN T ++ AC + L G I
Sbjct: 219 ATISGFVRNELHHNALGVFRKMVSCGVRPNGITFVCMIKACVGAGEFGLAMSIVGSAIKS 278
Query: 123 NGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAREL 182
N F S+ V N L+ +Y R GD +A K+F + +K+ VS ++ Y E+G++ AR +
Sbjct: 279 NFFESSIEVQNSLITLYLRMGDAAAARKVFDEMDVKDVVSWTALLDVYSESGDLDGARRV 338
Query: 183 FDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACA 242
D M +R +SW ++I+ + EA ++ +L DG P F SVL ACA
Sbjct: 339 LDAMP----ERNEVSWGTLIARHEQRGNAAEAVKLYSQMLA-DGCRPNISCFSSVLSACA 393
Query: 243 DMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL--- 299
+ LR G IHA ++ +G ++ FV +L++MYC+ + AQ FD + +N++
Sbjct: 394 TLEDLRGGARIHARSLKMGSSTNVFVSSSLIDMYCKCKKCRDAQTIFDTLPE-KNIVCWN 452
Query: 300 ---------GKMKEDGF------EPNVYTWN--------------AMQLFSEMLSLDLTP 330
GKM E + N+ +WN A++ F+ ML+ P
Sbjct: 453 SLASGYSYNGKMVEAMYLFKKMPARNLASWNTIISGYAQNRQFVDALRSFNAMLASGQVP 512
Query: 331 DIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAY 390
T +L AC++L ++ GK HA I+ G + + IGTAL DMYAK G L+ ++ +
Sbjct: 513 GEITFSSVLLACANLCSLVTGKMAHAKTIKLGMEESIFIGTALSDMYAKSGDLQSSKRMF 572
Query: 391 KRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIK 450
++ + V+ AM+ A +G +E I F ++A+G P+ +FL+ L AC H G ++
Sbjct: 573 YQMPERNDVTWTAMIQGLAENGLAEESILLFEDMMATGMTPNEHTFLALLFACSHGGLVE 632
Query: 451 TGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGC 510
+F+ M + + P KHYTCMVD+L+RAG L EA + K P ++ W ALL C
Sbjct: 633 QAIHYFEKMQAWGISPKEKHYTCMVDVLARAGRLIEAEALLMKTPSKSEANSWAALLSAC 692
Query: 511 VSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPG 570
++ N E G+ AA RL EL +NT YV+L+N++A GRW D AR R MK + K G
Sbjct: 693 NTYKNEEIGERAAKRLHELGKDNTAGYVLLSNMYASCGRWKDAARIRVLMKGTTLKKDGG 752
Query: 571 CSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
CSW++ R + H F + + H S EI I+D
Sbjct: 753 CSWVQVRGQYHAFFSWEAKHPLSMEINEILD 783
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 132/408 (32%), Positives = 197/408 (48%), Gaps = 11/408 (2%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y + G A+KVF M +D VSW +++ + +G + A L+ M N V
Sbjct: 294 LYLRMGDAAAARKVFDEMDVKDVVSWTALLDVYSESGDLDGARRVLDAMPE-----RNEV 348
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW +I Q G EA+ + +M A+G PN SSVL ACA L+ L G H
Sbjct: 349 SWGTLIARHEQRGNAAEAVKLYSQMLADGCRPNISCFSSVLSACATLEDLRGGARIHARS 408
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G +N FV + L+D+Y +C A IF KN V N++ GY NG + EA
Sbjct: 409 LKMGSSTNVFVSSSLIDMYCKCKKCRDAQTIFDTLPEKNIVCWNSLASGYSYNGKMVEAM 468
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LF +M R + SWN++ISGY N + +A F +L G P TF SVL+A
Sbjct: 469 YLFKKMP----ARNLASWNTIISGYAQNRQFVDALRSFNAMLA-SGQVPGEITFSSVLLA 523
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA++ SL GK HA I LG++ F+G AL +MY + DL +++ F ++ ++
Sbjct: 524 CANLCSLVTGKMAHAKTIKLGMEESIFIGTALSDMYAKSGDLQSSKRMFYQMPERNDVTW 583
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G N ++ LF +M++ +TP+ +T +L ACS +E+
Sbjct: 584 TAMIQGLAENGLAEESILLFEDMMATGMTPNEHTFLALLFACSHGGLVEQAIHYFEKMQA 643
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHAR-LAYKRISTPDLVSQNAMLTA 407
G T +VD+ A+ G L A L K S + S A+L+A
Sbjct: 644 WGISPKEKHYTCMVDVLARAGRLIEAEALLMKTPSKSEANSWAALLSA 691
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 121/484 (25%), Positives = 213/484 (44%), Gaps = 74/484 (15%)
Query: 127 SNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQM 186
++PF + +V + + GD+ SA +F ++ VS T++ + G VAEA EL++Q
Sbjct: 150 ASPFTYDFMVHEHVKAGDIASARGLFDGMPERSVVSYTTMVDALMKRGRVAEAVELYEQC 209
Query: 187 EHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNS 246
+ + + ISG+V N L+ A +FR ++ G+ P TF ++ AC
Sbjct: 210 P----SGSVAFFTATISGFVRNELHHNALGVFRKMV-SCGVRPNGITFVCMIKACVGAGE 264
Query: 247 LRKGKEIHALAIALG-LQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE-----NIENLLG 300
I AI +S V +L+ +Y R D AA+ FDE++ + LL
Sbjct: 265 FGLAMSIVGSAIKSNFFESSIEVQNSLITLYLRMGDAAAARKVFDEMDVKDVVSWTALLD 324
Query: 301 KMKEDG------------FEPNVYTW--------------NAMQLFSEMLSLDLTPDIYT 334
E G E N +W A++L+S+ML+ P+I
Sbjct: 325 VYSESGDLDGARRVLDAMPERNEVSWGTLIARHEQRGNAAEAVKLYSQMLADGCRPNISC 384
Query: 335 VGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKC-------------- 380
+LSAC++L + G ++HA +++ G ++V + ++L+DMY KC
Sbjct: 385 FSSVLSACATLEDLRGGARIHARSLKMGSSTNVFVSSSLIDMYCKCKKCRDAQTIFDTLP 444
Query: 381 -----------------GSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRR 423
G + A +K++ +L S N +++ YA + + + F
Sbjct: 445 EKNIVCWNSLASGYSYNGKMVEAMYLFKKMPARNLASWNTIISGYAQNRQFVDALRSFNA 504
Query: 424 ILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGE 483
+LASG P I+F S L AC + S+ TG ++ S+ T + D+ +++G+
Sbjct: 505 MLASGQVPGEITFSSVLLACANLCSLVTGKMAHAKTIKLGMEESIFIGTALSDMYAKSGD 564
Query: 484 LGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIE--LEPNNTGNYVMLA 541
L + ++P D V W A++ G +G E + + ++ + PN + LA
Sbjct: 565 LQSSKRMFYQMPERND-VTWTAMIQGLAENGLAEESILLFEDMMATGMTPN---EHTFLA 620
Query: 542 NLFA 545
LFA
Sbjct: 621 LLFA 624
>gi|30693150|ref|NP_190486.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75222188|sp|Q5G1T1.1|PP272_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g49170, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 2261; Flags: Precursor
gi|58013018|gb|AAW62962.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|58013020|gb|AAW62963.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|332644986|gb|AEE78507.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 184/563 (32%), Positives = 308/563 (54%), Gaps = 43/563 (7%)
Query: 42 ALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVL 101
A + ++MS L N+V+W+ +I Q G+ EAI M G E + TLSSV
Sbjct: 222 AYKVFDKMSEL-----NVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVF 276
Query: 102 PACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEV 161
ACA L+ LSLGK+ H + R+G + + V LVD+Y +C
Sbjct: 277 SACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCS------------------ 316
Query: 162 SCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDN-SLYDEAFSMFRD 220
+G+V + R++FD+ME ++SW ++I+GY+ N +L EA ++F +
Sbjct: 317 ----------ADGSVDDCRKVFDRME----DHSVMSWTALITGYMKNCNLATEAINLFSE 362
Query: 221 LLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQ 280
++ + +EP FTF S AC +++ R GK++ A GL S++ V +++ M+ +
Sbjct: 363 MITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSD 422
Query: 281 DLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILS 340
+ AQ AF+ + + DG N+ A +L SE+ +L +T +LS
Sbjct: 423 RMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLS 482
Query: 341 ACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVS 400
+++ ++ +G+Q+H+ ++ G + + AL+ MY+KCGS+ A + + +++S
Sbjct: 483 GVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVIS 542
Query: 401 QNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA 460
+M+T +A HG + F +++ G +P+ +++++ LSAC H G + G F+ M
Sbjct: 543 WTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSM- 601
Query: 461 YYD--VKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEF 518
Y D +KP ++HY CMVDLL RAG L +A+EFI +P D ++W LG C H N E
Sbjct: 602 YEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTEL 661
Query: 519 GQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRD 578
G++AA +++EL+PN Y+ L+N++A AG+W + R+KMK+R + K GCSWIE D
Sbjct: 662 GKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGD 721
Query: 579 EIHKFRASDRSHDRSEEIYTIID 601
+IHKF D +H + +IY +D
Sbjct: 722 KIHKFYVGDTAHPNAHQIYDELD 744
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 103/398 (25%), Positives = 181/398 (45%), Gaps = 69/398 (17%)
Query: 78 AIGMLFRMQAEGLEP-NARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLV 136
A+ L M +G+ P ++ T SS+L +C R + LGK H + + + N L+
Sbjct: 45 AVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLI 104
Query: 137 DVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGII 196
+Y + GD A+A ++F+ M G +R ++
Sbjct: 105 SLYSKSGDS-------------------------------AKAEDVFETMRRFG-KRDVV 132
Query: 197 SWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHAL 256
SW++M++ Y +N +A +F + L G+ P + + +V+ AC++ + + G+
Sbjct: 133 SWSAMMACYGNNGRELDAIKVFVEFL-ELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGF 191
Query: 257 AIALG-LQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWN 315
+ G +SD VG +L++M+ + + + EN + KM E NV TW
Sbjct: 192 LMKTGHFESDVCVGCSLIDMFVKGE---------NSFENAYKVFDKMS----ELNVVTWT 238
Query: 316 --------------AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRC 361
A++ F +M+ D +T+ + SAC+ L + GKQ+H++AIR
Sbjct: 239 LMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRS 298
Query: 362 GYDSDVHIGTALVDMYAKC---GSLKHARLAYKRISTPDLVSQNAMLTAYAMHGH-GKEG 417
G DV +LVDMYAKC GS+ R + R+ ++S A++T Y + + E
Sbjct: 299 GLVDDVE--CSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEA 356
Query: 418 IAHFRRILASG-FRPDHISFLSALSACVHAGSIKTGSE 454
I F ++ G P+H +F SA AC + + G +
Sbjct: 357 INLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQ 394
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 159/356 (44%), Gaps = 40/356 (11%)
Query: 220 DLLMRDGIEPT-SFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCR 278
DL+ RDGI P S TF S+L +C R GK +HA I ++ D+ + +L+ +Y +
Sbjct: 50 DLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSK 109
Query: 279 YQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAM--------------QLFSEML 324
D A+ F+ + GK +V +W+AM ++F E L
Sbjct: 110 SGDSAKAEDVFETMRR----FGKR-------DVVSWSAMMACYGNNGRELDAIKVFVEFL 158
Query: 325 SLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCG-YDSDVHIGTALVDMYAKC-GS 382
L L P+ Y ++ ACS+ + G+ + ++ G ++SDV +G +L+DM+ K S
Sbjct: 159 ELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENS 218
Query: 383 LKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSA 442
++A + ++S ++V+ M+T G +E I F ++ SGF D + S SA
Sbjct: 219 FENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSA 278
Query: 443 CVHAGSIKTGSEFFDLMAYY----DVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAP 498
C ++ G + DV+ SL VD+ ++ G + K
Sbjct: 279 CAELENLSLGKQLHSWAIRSGLVDDVECSL------VDMYAKCSADGSVDDCRKVFDRME 332
Query: 499 D-SVM-WGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSD 552
D SVM W AL+ G + + NL I + + + N+ ++ F G SD
Sbjct: 333 DHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSD 388
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGS+D A +VF M R+ +SW S++T A +G + LE +M + PN V
Sbjct: 518 MYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIE-EGVKPNEV 576
Query: 61 SWSAVIGGFTQNGYDEE 77
++ A++ + G E
Sbjct: 577 TYVAILSACSHVGLVSE 593
>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Vitis vinifera]
Length = 881
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 186/547 (34%), Positives = 299/547 (54%), Gaps = 41/547 (7%)
Query: 54 NETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEG--LEPNARTLSSVLPACARLQKLS 111
N+ N+VSW+++IGG+ + +L +MQ E ++ + T+ +VLP C +L
Sbjct: 265 NDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVCLERSELQ 324
Query: 112 LGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYC 171
KE HGY R+G SN V N + Y RC
Sbjct: 325 SLKELHGYSWRHGLQSNELVANAFIAAYTRC----------------------------- 355
Query: 172 ENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRD-GIEPT 230
G + + +FD M+ + + SWN+++ GY NS +A ++ L M D G++P
Sbjct: 356 --GALCSSERVFDLMD----TKTVSSWNALLCGYAQNSDPRKALDLY--LQMTDSGLDPD 407
Query: 231 SFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFD 290
FT GS+L+AC+ M SL G+EIH A+ GL D F+G +L+ +Y AAQ+ FD
Sbjct: 408 WFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFD 467
Query: 291 EIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMER 350
+E+ + + G+ N A+ LF +MLS + P + + ACS L+ +
Sbjct: 468 GMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRL 527
Query: 351 GKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAM 410
GK++H +A++ D+ + ++++DMYAK G + ++ + R+ D+ S N ++ Y +
Sbjct: 528 GKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGI 587
Query: 411 HGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFD-LMAYYDVKPSLK 469
HG GKE + F ++L G +PD +F L AC HAG ++ G E+F+ ++ ++++P L+
Sbjct: 588 HGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLE 647
Query: 470 HYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIEL 529
HYTC+VD+L RAG + +A I+++P PDS +W +LL C HGNL G+ A++L+EL
Sbjct: 648 HYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLEL 707
Query: 530 EPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRS 589
EP NYV+++NLFA +G+W D+ R R +MKD + K GCSWIE ++H F D
Sbjct: 708 EPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQKDAGCSWIEVGGKVHNFLIGDEM 767
Query: 590 HDRSEEI 596
EE+
Sbjct: 768 LPELEEV 774
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 147/599 (24%), Positives = 251/599 (41%), Gaps = 110/599 (18%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKCG +++A KVF+ MPER NLV
Sbjct: 145 MYGKCGLVEEAVKVFEHMPER------------------------------------NLV 168
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQA--EGLEPNARTLSSVLPACARLQKLSLGKEFHG 118
SW+++I GF++NG+ +E+ M E P+ TL +VLP CA + + G HG
Sbjct: 169 SWNSIICGFSENGFLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHG 228
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
+ G V N L+D+Y +C + A +F K KN VS N++I GY +V
Sbjct: 229 LAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCR 288
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
L +M+ + ++ FT +VL
Sbjct: 289 TFYLLQKMQTEDAK----------------------------------MKADEFTILNVL 314
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
C + + L+ KE+H + GLQS+ V A + Y R L +++ FD ++
Sbjct: 315 PVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSERVFDLMDTKTVS 374
Query: 299 LGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYA 358
G+ N A+ L+ +M L PD +T+G +L ACS + ++ G+++H +A
Sbjct: 375 SWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFA 434
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGI 418
+R G D IG +L+ +Y CG A++ + + LVS N M+ Y+ +G E I
Sbjct: 435 LRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAI 494
Query: 419 AHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLL 478
FR++L+ G +P I+ + AC +++ G E + + + ++D+
Sbjct: 495 NLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMY 554
Query: 479 SRAGELG----------------------------------EAYEFIKKIPMAPDSVMWG 504
++ G +G E +E + ++ + PD +
Sbjct: 555 AKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFT 614
Query: 505 ALLGGCVSHGNLEFGQIAADRLIEL---EPNNTGNYVMLANLFAYAGRWSDLARTRQKM 560
+L C G +E G ++++ L EP +Y + ++ AGR D R ++M
Sbjct: 615 GILMACSHAGLVEDGLEYFNQMLNLHNIEP-KLEHYTCVVDMLGRAGRIDDALRLIEEM 672
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 121/472 (25%), Positives = 201/472 (42%), Gaps = 101/472 (21%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY CGS D++ VF + ++ WN++V+A N L +A+ + S+
Sbjct: 43 MYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEH----- 97
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+P+ TL V+ ACA L L LG+ HG
Sbjct: 98 ------------------------------KPDNFTLPCVIKACAGLLDLGLGQIIHGMA 127
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
T+ +S+ FV N L+ +Y +CG + A+K+F +N VS N+II G+ ENG
Sbjct: 128 TKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENG------ 181
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLM-RDGIEPTSFTFGSVLI 239
E+F+ FR++L+ + P T +VL
Sbjct: 182 -----------------------------FLQESFNAFREMLVGEESFVPDVATLVTVLP 212
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
CA + KG +H LA+ LGL + V +L++MY + + L AQ+ FD
Sbjct: 213 VCAGEEDIEKGMAVHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLFD--------- 263
Query: 300 GKMKEDGFEPNVYTWNAM--------------QLFSEMLSLD--LTPDIYTVGIILSACS 343
K D + N+ +WN+M L +M + D + D +T+ +L C
Sbjct: 264 ---KND--KKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVCL 318
Query: 344 SLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNA 403
+ ++ K++H Y+ R G S+ + A + Y +CG+L + + + T + S NA
Sbjct: 319 ERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSERVFDLMDTKTVSSWNA 378
Query: 404 MLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEF 455
+L YA + ++ + + ++ SG PD + S L AC S+ G E
Sbjct: 379 LLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEI 430
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 161/325 (49%), Gaps = 14/325 (4%)
Query: 136 VDVYRRCGDMLSALKIFSKFSIKNEVSCNT-IIVGYCENGNVAEARELFDQMEHLGVQRG 194
++V RR +M+SA F N+ NT II Y G+ +++R +FD++ ++
Sbjct: 14 IEVGRRLHEMVSASTQFC-----NDFVLNTRIITMYSMCGSPSDSRMVFDKLR----RKN 64
Query: 195 IISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIH 254
+ WN+++S Y N L+++A S+F +L+ +P +FT V+ ACA + L G+ IH
Sbjct: 65 LFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIH 124
Query: 255 ALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTW 314
+A + L SD FVG AL+ MY + + A F+ + + GF N +
Sbjct: 125 GMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGFLQ 184
Query: 315 NAMQLFSEML--SLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTA 372
+ F EML PD+ T+ +L C+ +E+G VH A++ G + ++ + +
Sbjct: 185 ESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVNNS 244
Query: 373 LVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILA--SGFR 430
L+DMY+KC L A+L + + ++VS N+M+ YA +++ + +
Sbjct: 245 LIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAKMK 304
Query: 431 PDHISFLSALSACVHAGSIKTGSEF 455
D + L+ L C+ +++ E
Sbjct: 305 ADEFTILNVLPVCLERSELQSLKEL 329
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/185 (19%), Positives = 90/185 (48%), Gaps = 3/185 (1%)
Query: 335 VGIILSACSSLATMERGKQVHA-YAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRI 393
+G++L AC +E G+++H + + +D + T ++ MY+ CGS +R+ + ++
Sbjct: 1 MGVLLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKL 60
Query: 394 STPDLVSQNAMLTAYAMHGHGKEGIAHFRRILA-SGFRPDHISFLSALSACVHAGSIKTG 452
+L NA+++AY + ++ ++ F +++ + +PD+ + + AC + G
Sbjct: 61 RRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLG 120
Query: 453 SEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVS 512
+ D+ + ++ + + G + EA + + +P + V W +++ G
Sbjct: 121 QIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMP-ERNLVSWNSIICGFSE 179
Query: 513 HGNLE 517
+G L+
Sbjct: 180 NGFLQ 184
>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 193/544 (35%), Positives = 297/544 (54%), Gaps = 38/544 (6%)
Query: 55 ETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGK 114
E ++V+W++++ GF QNG EA+ + +Q L+P+ ++ S++ A RL L GK
Sbjct: 222 EGKDIVTWNSMLTGFIQNGLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGK 281
Query: 115 EFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
E H Y +NGF SN V N L+D+Y +C M
Sbjct: 282 EIHAYAIKNGFDSNILVGNTLIDMYAKCCCM----------------------------- 312
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTF 234
+ FD M H + +ISW + +GY N Y +A + R L M +G++ +
Sbjct: 313 --SYGGRAFDLMAH----KDLISWTTAAAGYAQNKCYLQALELLRQLQM-EGMDVDATMI 365
Query: 235 GSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIEN 294
GS+L+AC +N L K KEIH I GL SD + ++++Y + A F+ IE
Sbjct: 366 GSILLACRGLNCLGKIKEIHGYTIRGGL-SDPVLQNTIIDVYGECGIIDYAVRIFESIEC 424
Query: 295 IENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV 354
+ + + N A+++FS M L PD T+ ILSA SL+T+++GK++
Sbjct: 425 KDVVSWTSMISCYVHNGLANKALEVFSSMKETGLEPDYVTLVSILSAVCSLSTLKKGKEI 484
Query: 355 HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHG 414
H + IR G+ + I LVDMYA+CGS++ A + +L+ AM++AY MHG+G
Sbjct: 485 HGFIIRKGFILEGSISNTLVDMYARCGSVEDAYKIFTCTKNRNLILWTAMISAYGMHGYG 544
Query: 415 KEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTC 473
+ + F R+ PDHI+FL+ L AC H+G + G F ++M Y ++P +HYTC
Sbjct: 545 EAAVELFMRMKDEKIIPDHITFLALLYACSHSGLVNEGKSFLEIMKCEYQLEPWPEHYTC 604
Query: 474 MVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNN 533
+VDLL R L EAY+ +K + P +W ALLG C H N E G++AA++L+EL+ +N
Sbjct: 605 LVDLLGRRNCLEEAYQIVKSMQNEPTPEVWCALLGACRIHSNKEIGEVAAEKLLELDLDN 664
Query: 534 TGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRS 593
GNYV+++N+FA GRW D+ R +MK + K+PGCSWIE ++IH F + D+ H
Sbjct: 665 PGNYVLVSNVFAANGRWKDVEEVRMRMKGSGLTKNPGCSWIEVGNKIHAFLSRDKLHPEC 724
Query: 594 EEIY 597
++IY
Sbjct: 725 DKIY 728
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 153/571 (26%), Positives = 254/571 (44%), Gaps = 101/571 (17%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKCGS+ DA+ +F M ER ++
Sbjct: 1 MYGKCGSVLDAEMIFDKMSER------------------------------------SIF 24
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+A++GG+ NG A+ M M+ G+ ++ T +L AC ++ L G E HG
Sbjct: 25 TWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYTFPVLLKACGIVEDLFCGAEIHGLA 84
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G S FVVN LV +Y +C D+ NG AR
Sbjct: 85 IKYGCDSFVFVVNSLVALYAKCNDI---------------------------NG----AR 113
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+LFD+M V+ ++SWNS+IS Y N + EA +F ++L + G+ ++TF + L A
Sbjct: 114 KLFDRMY---VRNDVVSWNSIISAYSGNGMCTEALCLFSEML-KAGVVTNTYTFAAALQA 169
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C D + ++ G +IHA + G D +V ALV MY R+ + A + F +E + +
Sbjct: 170 CEDSSFIKLGMQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTW 229
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
GF N A++ F ++ + DL PD ++ I+ A L + GK++HAYAI+
Sbjct: 230 NSMLTGFIQNGLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIK 289
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
G+DS++ +G L+DMYAKC + + A+ ++ DL+S YA + + +
Sbjct: 290 NGFDSNILVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALEL 349
Query: 421 FRRILASGFRPDHISFLSALSAC-----------VHAGSIKTGSEFFDLMAYYDVKPSLK 469
R++ G D S L AC +H +I+ G P L+
Sbjct: 350 LRQLQMEGMDVDATMIGSILLACRGLNCLGKIKEIHGYTIRGGLS----------DPVLQ 399
Query: 470 HYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG--NLEFGQIAADRLI 527
+ ++D+ G + A + I D V W +++ V +G N ++ +
Sbjct: 400 N--TIIDVYGECGIIDYAVRIFESIE-CKDVVSWTSMISCYVHNGLANKALEVFSSMKET 456
Query: 528 ELEPNNTGNYVMLANLFAYAGRWSDLARTRQ 558
LEP +YV L ++ + S L + ++
Sbjct: 457 GLEP----DYVTLVSILSAVCSLSTLKKGKE 483
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 103/208 (49%), Gaps = 5/208 (2%)
Query: 22 DCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGM 81
D V N+++ G++ A+ E + E ++VSW+++I + NG +A+ +
Sbjct: 395 DPVLQNTIIDVYGECGIIDYAVRIFESI-----ECKDVVSWTSMISCYVHNGLANKALEV 449
Query: 82 LFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRR 141
M+ GLEP+ TL S+L A L L GKE HG+I R GF+ + N LVD+Y R
Sbjct: 450 FSSMKETGLEPDYVTLVSILSAVCSLSTLKKGKEIHGFIIRKGFILEGSISNTLVDMYAR 509
Query: 142 CGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSM 201
CG + A KIF+ +N + +I Y +G A ELF +M+ + I++ ++
Sbjct: 510 CGSVEDAYKIFTCTKNRNLILWTAMISAYGMHGYGEAAVELFMRMKDEKIIPDHITFLAL 569
Query: 202 ISGYVDNSLYDEAFSMFRDLLMRDGIEP 229
+ + L +E S + +EP
Sbjct: 570 LYACSHSGLVNEGKSFLEIMKCEYQLEP 597
>gi|6723387|emb|CAB66396.1| putative protein [Arabidopsis thaliana]
Length = 1113
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 184/563 (32%), Positives = 308/563 (54%), Gaps = 43/563 (7%)
Query: 42 ALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVL 101
A + ++MS L N+V+W+ +I Q G+ EAI M G E + TLSSV
Sbjct: 222 AYKVFDKMSEL-----NVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVF 276
Query: 102 PACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEV 161
ACA L+ LSLGK+ H + R+G + + V LVD+Y +C
Sbjct: 277 SACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCS------------------ 316
Query: 162 SCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDN-SLYDEAFSMFRD 220
+G+V + R++FD+ME ++SW ++I+GY+ N +L EA ++F +
Sbjct: 317 ----------ADGSVDDCRKVFDRME----DHSVMSWTALITGYMKNCNLATEAINLFSE 362
Query: 221 LLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQ 280
++ + +EP FTF S AC +++ R GK++ A GL S++ V +++ M+ +
Sbjct: 363 MITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSD 422
Query: 281 DLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILS 340
+ AQ AF+ + + DG N+ A +L SE+ +L +T +LS
Sbjct: 423 RMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLS 482
Query: 341 ACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVS 400
+++ ++ +G+Q+H+ ++ G + + AL+ MY+KCGS+ A + + +++S
Sbjct: 483 GVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVIS 542
Query: 401 QNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA 460
+M+T +A HG + F +++ G +P+ +++++ LSAC H G + G F+ M
Sbjct: 543 WTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSM- 601
Query: 461 YYD--VKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEF 518
Y D +KP ++HY CMVDLL RAG L +A+EFI +P D ++W LG C H N E
Sbjct: 602 YEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTEL 661
Query: 519 GQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRD 578
G++AA +++EL+PN Y+ L+N++A AG+W + R+KMK+R + K GCSWIE D
Sbjct: 662 GKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGD 721
Query: 579 EIHKFRASDRSHDRSEEIYTIID 601
+IHKF D +H + +IY +D
Sbjct: 722 KIHKFYVGDTAHPNAHQIYDELD 744
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/398 (25%), Positives = 181/398 (45%), Gaps = 69/398 (17%)
Query: 78 AIGMLFRMQAEGLEP-NARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLV 136
A+ L M +G+ P ++ T SS+L +C R + LGK H + + + N L+
Sbjct: 45 AVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLI 104
Query: 137 DVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGII 196
+Y + GD A+A ++F+ M G +R ++
Sbjct: 105 SLYSKSGDS-------------------------------AKAEDVFETMRRFG-KRDVV 132
Query: 197 SWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHAL 256
SW++M++ Y +N +A +F + L G+ P + + +V+ AC++ + + G+
Sbjct: 133 SWSAMMACYGNNGRELDAIKVFVEFL-ELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGF 191
Query: 257 AIALG-LQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWN 315
+ G +SD VG +L++M+ + + + EN + KM E NV TW
Sbjct: 192 LMKTGHFESDVCVGCSLIDMFVKGE---------NSFENAYKVFDKMS----ELNVVTWT 238
Query: 316 --------------AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRC 361
A++ F +M+ D +T+ + SAC+ L + GKQ+H++AIR
Sbjct: 239 LMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRS 298
Query: 362 GYDSDVHIGTALVDMYAKC---GSLKHARLAYKRISTPDLVSQNAMLTAYAMHGH-GKEG 417
G DV +LVDMYAKC GS+ R + R+ ++S A++T Y + + E
Sbjct: 299 GLVDDVE--CSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEA 356
Query: 418 IAHFRRILASG-FRPDHISFLSALSACVHAGSIKTGSE 454
I F ++ G P+H +F SA AC + + G +
Sbjct: 357 INLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQ 394
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 101/395 (25%), Positives = 172/395 (43%), Gaps = 41/395 (10%)
Query: 220 DLLMRDGIEPT-SFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCR 278
DL+ RDGI P S TF S+L +C R GK +HA I ++ D+ + +L+ +Y +
Sbjct: 50 DLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSK 109
Query: 279 YQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAM--------------QLFSEML 324
D A+ F+ + GK +V +W+AM ++F E L
Sbjct: 110 SGDSAKAEDVFETMRR----FGKR-------DVVSWSAMMACYGNNGRELDAIKVFVEFL 158
Query: 325 SLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCG-YDSDVHIGTALVDMYAKC-GS 382
L L P+ Y ++ ACS+ + G+ + ++ G ++SDV +G +L+DM+ K S
Sbjct: 159 ELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENS 218
Query: 383 LKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSA 442
++A + ++S ++V+ M+T G +E I F ++ SGF D + S SA
Sbjct: 219 FENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSA 278
Query: 443 CVHAGSIKTGSEFFDLMAYY----DVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAP 498
C ++ G + DV+ SL VD+ ++ G + K
Sbjct: 279 CAELENLSLGKQLHSWAIRSGLVDDVECSL------VDMYAKCSADGSVDDCRKVFDRME 332
Query: 499 D-SVM-WGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLART 556
D SVM W AL+ G + + NL I + + + N+ ++ F G SD R
Sbjct: 333 DHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSD-PRV 391
Query: 557 RQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHD 591
+++ + + + I F SDR D
Sbjct: 392 GKQVLGQAFKRGLASNSSVANSVISMFVKSDRMED 426
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGS+D A +VF M R+ +SW S++T A +G + LE +M + PN V
Sbjct: 518 MYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIE-EGVKPNEV 576
Query: 61 SWSAVIGGFTQNGYDEE 77
++ A++ + G E
Sbjct: 577 TYVAILSACSHVGLVSE 593
>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Vitis vinifera]
Length = 709
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 181/541 (33%), Positives = 299/541 (55%), Gaps = 8/541 (1%)
Query: 57 PNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEF 116
P ++W ++I +T +G ++ +M A G P+ SVL +C ++ L G+
Sbjct: 69 PTTLAWKSIIRCYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESV 128
Query: 117 HGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNV 176
HG I R G + + N L+++Y + L + + K + + S + E+ +
Sbjct: 129 HGCIIRLGMGFDLYTCNALMNMYSKFWS-LEEVNTYKKVFDEGKTS-DVYSKKEKESYYL 186
Query: 177 AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGS 236
R++F+ M +R I+SWN++ISG N ++++A M R++ D + P SFT S
Sbjct: 187 GSLRKVFEMMP----KRDIVSWNTVISGNAQNGMHEDALMMVREMGNAD-LRPDSFTLSS 241
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
VL A+ +L KGKEIH AI G +D F+G +L++MY + + + F + +
Sbjct: 242 VLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHD 301
Query: 297 NLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHA 356
+ G N ++ F +ML + P+ + I+ AC+ L T+ GKQ+H
Sbjct: 302 GISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHG 361
Query: 357 YAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKE 416
Y IR +D +V I +ALVDMYAKCG+++ AR + ++ D+VS AM+ YA+HGH +
Sbjct: 362 YIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYD 421
Query: 417 GIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMV 475
I+ F+R+ G +P++++F++ L+AC HAG + ++F+ M Y + P L+HY +
Sbjct: 422 AISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVA 481
Query: 476 DLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTG 535
DLL R G L EAYEFI + + P +W LL C H N+E + + +L ++P N G
Sbjct: 482 DLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIG 541
Query: 536 NYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEE 595
YV+L+N+++ AGRW D + R M+D+ M K P CSWIE ++++H F A D+SH +
Sbjct: 542 AYVLLSNIYSAAGRWKDARKLRIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYDR 601
Query: 596 I 596
I
Sbjct: 602 I 602
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 131/273 (47%), Gaps = 68/273 (24%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC +DD+ +VF M+P+ D +SWNS++ C NG+ E L+ ++M L+
Sbjct: 280 MYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQM---------LI 330
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+ ++PN + SS++PACA L L LGK+ HGYI
Sbjct: 331 A---------------------------KIKPNHVSFSSIMPACAHLTTLHLGKQLHGYI 363
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R+ F N F+ + LVD+Y +CG++ +A IF K + + VS +I+GY +G+ +A
Sbjct: 364 IRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAI 423
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFR-------------------DL 221
LF +ME GV+ +++ ++++ L DEA+ F DL
Sbjct: 424 SLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADL 483
Query: 222 LMRDG-------------IEPTSFTFGSVLIAC 241
L R G IEPT + ++L AC
Sbjct: 484 LGRVGRLEEAYEFISDMHIEPTGSVWSTLLAAC 516
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 56/116 (48%), Gaps = 2/116 (1%)
Query: 338 ILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRI-STP 396
+L SS+ + + KQ+HA +R S + T L +Y+ L + L + + S P
Sbjct: 11 LLQNPSSVKSKSQAKQLHAQILRTSLPSPSLLSTIL-SIYSNLNLLHDSLLIFNSLPSPP 69
Query: 397 DLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTG 452
++ +++ Y HG ++ F ++LASG PDH F S L +C ++ G
Sbjct: 70 TTLAWKSIIRCYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFG 125
>gi|356547226|ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Glycine max]
Length = 693
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 189/531 (35%), Positives = 297/531 (55%), Gaps = 18/531 (3%)
Query: 76 EEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGL 135
+EA+ +L R P+AR S+++ AC R + L LG+ H + + F+ F+ N L
Sbjct: 72 KEAVELLHRTDHR---PSARVYSTLIAACVRHRALELGRRVHAHTKASNFVPGVFISNRL 128
Query: 136 VDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGI 195
+D+Y +CG ++ A +F + ++ S NT+IVGY + G + +AR+LFD+M QR
Sbjct: 129 LDMYAKCGSLVDAQMLFDEMGHRDLCSWNTMIVGYAKLGRLEQARKLFDEMP----QRDN 184
Query: 196 ISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHA 255
SWN+ ISGYV ++ EA +FR + + FT S L A A + LR GKEIH
Sbjct: 185 FSWNAAISGYVTHNQPREALELFRVMQRHERSSSNKFTLSSALAASAAIPCLRLGKEIHG 244
Query: 256 LAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE-----NLLGKMKEDGFEPN 310
I L D V AL+++Y + L A+ FD++++ + ++ + EDG
Sbjct: 245 YLIRTELNLDEVVWSALLDLYGKCGSLDEARGIFDQMKDRDVVSWTTMIHRCFEDGRREE 304
Query: 311 VYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIG 370
+ LF +++ + P+ YT +L+AC+ A GK+VH Y + GYD
Sbjct: 305 GFL-----LFRDLMQSGVRPNEYTFAGVLNACADHAAEHLGKEVHGYMMHAGYDPGSFAI 359
Query: 371 TALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFR 430
+ALV MY+KCG+ + AR + + PDLVS +++ YA +G E + F +L SG +
Sbjct: 360 SALVHMYSKCGNTRVARRVFNEMHQPDLVSWTSLIVGYAQNGQPDEALHFFELLLQSGTK 419
Query: 431 PDHISFLSALSACVHAGSIKTGSEFF-DLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYE 489
PD ++++ LSAC HAG + G E+F + + + + HY C++DLL+R+G EA
Sbjct: 420 PDQVTYVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFKEAEN 479
Query: 490 FIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGR 549
I +P+ PD +W +LLGGC HGNLE + AA L E+EP N Y+ LAN++A AG
Sbjct: 480 IIDNMPVKPDKFLWASLLGGCRIHGNLELAKRAAKALYEIEPENPATYITLANIYANAGL 539
Query: 550 WSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTII 600
WS++A R+ M + + K PG SWIE + ++H F D SH ++ +I+ +
Sbjct: 540 WSEVANVRKDMDNMGIVKKPGKSWIEIKRQVHVFLVGDTSHPKTSDIHEFL 590
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 120/415 (28%), Positives = 182/415 (43%), Gaps = 44/415 (10%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGSL DA+ +F M RD SWN+++ A G + +A + + M DN
Sbjct: 131 MYAKCGSLVDAQMLFDEMGHRDLCSWNTMIVGYAKLGRLEQARKLFDEMPQRDN-----F 185
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQA-EGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
SW+A I G+ + EA+ + MQ E N TLSS L A A + L LGKE HGY
Sbjct: 186 SWNAAISGYVTHNQPREALELFRVMQRHERSSSNKFTLSSALAASAAIPCLRLGKEIHGY 245
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ R + V + L+D+Y +CG + A IF + ++ VS T+I E+G
Sbjct: 246 LIRTELNLDEVVWSALLDLYGKCGSLDEARGIFDQMKDRDVVSWTTMIHRCFEDGR---- 301
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
+E F +FRD LM+ G+ P +TF VL
Sbjct: 302 -------------------------------REEGFLLFRD-LMQSGVRPNEYTFAGVLN 329
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
ACAD + GKE+H + G +F ALV MY + + A+ F+E+ + +
Sbjct: 330 ACADHAAEHLGKEVHGYMMHAGYDPGSFAISALVHMYSKCGNTRVARRVFNEMHQPDLVS 389
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ-VHAYA 358
G+ N A+ F +L PD T +LSAC+ +++G + H+
Sbjct: 390 WTSLIVGYAQNGQPDEALHFFELLLQSGTKPDQVTYVGVLSACTHAGLVDKGLEYFHSIK 449
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST-PDLVSQNAMLTAYAMHG 412
+ G ++D+ A+ G K A + PD ++L +HG
Sbjct: 450 EKHGLMHTADHYACVIDLLARSGRFKEAENIIDNMPVKPDKFLWASLLGGCRIHG 504
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/363 (25%), Positives = 156/363 (42%), Gaps = 55/363 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+YGKCGSLD+A+ +F M +RD VSW +++ C +G E
Sbjct: 264 LYGKCGSLDEARGIFDQMKDRDVVSWTTMIHRCFEDGRREE------------------- 304
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFR-MQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
GF +LFR + G+ PN T + VL ACA LGKE HGY
Sbjct: 305 -------GF-----------LLFRDLMQSGVRPNEYTFAGVLNACADHAAEHLGKEVHGY 346
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ G+ F ++ LV +Y +CG+ A ++F++ + VS ++IVGY +NG EA
Sbjct: 347 MMHAGYDPGSFAISALVHMYSKCGNTRVARRVFNEMHQPDLVSWTSLIVGYAQNGQPDEA 406
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
F+ + G + +++ ++S L D+ F + + G+ T+ + V+
Sbjct: 407 LHFFELLLQSGTKPDQVTYVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVID 466
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALV---EMYCRYQDLVAAQMAFDEIENIE 296
A KE + + ++ D F+ +L+ ++ + A A EIE E
Sbjct: 467 LLARSGRF---KEAENIIDNMPVKPDKFLWASLLGGCRIHGNLELAKRAAKALYEIEP-E 522
Query: 297 NLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHA 356
N + N W+ + ++ D+ +GI+ S ++R QVH
Sbjct: 523 NPATYITLANIYANAGLWSEVA--------NVRKDMDNMGIVKKPGKSWIEIKR--QVHV 572
Query: 357 YAI 359
+ +
Sbjct: 573 FLV 575
>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Vitis vinifera]
Length = 1088
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 198/632 (31%), Positives = 322/632 (50%), Gaps = 106/632 (16%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG +++A +VF+ + ER+ VS+N
Sbjct: 421 MYSKCGMVEEAHQVFRSLLERNEVSYN--------------------------------- 447
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
A++ G+ Q G EEA+ + MQ+E G++P+ T +++L CA + + G++ H +
Sbjct: 448 ---ALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAH 504
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ R N V LV +Y CG + A
Sbjct: 505 LIRANITKNIIVETELVHMYSECGRL-------------------------------NYA 533
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
+E+F++M +R SWNSMI GY N EA +F+ + + +GI+P F+ S+L
Sbjct: 534 KEIFNRM----AERNAYSWNSMIEGYQQNGETQEALRLFKQMQL-NGIKPDCFSLSSMLS 588
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
+C ++ +KG+E+H + ++ + + LV+MY + + A +D+ + +L
Sbjct: 589 SCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVIL 648
Query: 300 GKMKEDGF-----------------EPNVYTWNAM--------------QLFSEMLSLDL 328
+ F + N WN++ F EML D+
Sbjct: 649 NNVMVSAFVNSGRANDAKNLFDQMEQRNTALWNSILAGYANKGLKKESFNHFLEMLESDI 708
Query: 329 TPDIYTVGIILSACSSLATMERGKQVHAYAIRCGY-DSDVHIGTALVDMYAKCGSLKHAR 387
D+ T+ I++ CSSL +E G Q+H+ I+ G+ + V + TALVDMY+KCG++ AR
Sbjct: 709 EYDVLTMVTIVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVLETALVDMYSKCGAITKAR 768
Query: 388 LAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAG 447
+ ++ ++VS NAM++ Y+ HG KE + + + G P+ ++FL+ LSAC H G
Sbjct: 769 TVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTG 828
Query: 448 SIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGAL 506
++ G F M Y+++ +HYTCMVDLL RAG L +A EF++K+P+ P+ WGAL
Sbjct: 829 LVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGAL 888
Query: 507 LGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMH 566
LG C H +++ G++AA RL EL+P N G YV+++N++A AGRW ++ RQ MK + +
Sbjct: 889 LGACRVHKDMDMGRLAAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVK 948
Query: 567 KSPGCSWIEDRDEIHKFRASDRSHDRSEEIYT 598
K PG SWIE EI F A ++H ++EEIY
Sbjct: 949 KDPGVSWIEINSEIQIFHAGSKTHPKTEEIYN 980
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 157/610 (25%), Positives = 271/610 (44%), Gaps = 121/610 (19%)
Query: 1 MYGKCGSLDD---AKKVFKMMPERDCVSWN------------------------------ 27
+Y + G LDD A+K+F+ MPER+ +WN
Sbjct: 115 LYARSGCLDDLCYARKLFEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSD 174
Query: 28 -----SVVTACAA-----------NGLVLEALECL------------------ERMSSLD 53
SV+ AC A + +V L C + ++SLD
Sbjct: 175 KFTFPSVIKACIAMEDMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLD 234
Query: 54 N-ETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSL 112
E ++V+W+AVI G+ + EEA G+ RM G+ P+ T +S L C L+
Sbjct: 235 EIEGTSVVTWNAVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDG 294
Query: 113 GKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCE 172
GK+ H + GF + FV N L+D+Y +C D S LK+F + +N+V+ N+II +
Sbjct: 295 GKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQ 354
Query: 173 NGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSF 232
G+ +A LF +M+ SGY N F
Sbjct: 355 FGHFNDALVLFLRMQE--------------SGYKSN----------------------RF 378
Query: 233 TFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAF--- 289
GS+L+A A + + KG+E+H + L SD +G ALV+MY + + A F
Sbjct: 379 NLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSL 438
Query: 290 ---DEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLD-LTPDIYTVGIILSACSSL 345
+E+ L G ++E E A++L+ +M S D + PD +T +L+ C++
Sbjct: 439 LERNEVSYNALLAGYVQEGKAE------EALELYHDMQSEDGIQPDQFTFTTLLTLCANQ 492
Query: 346 ATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAML 405
+G+Q+HA+ IR ++ + T LV MY++CG L +A+ + R++ + S N+M+
Sbjct: 493 RNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMI 552
Query: 406 TAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVK 465
Y +G +E + F+++ +G +PD S S LS+CV + G E + + ++
Sbjct: 553 EGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTME 612
Query: 466 PSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADR 525
+VD+ ++ G + A++ + + D ++ ++ V+ G A +
Sbjct: 613 EEGILQVVLVDMYAKCGSMDYAWKVYDQT-IKKDVILNNVMVSAFVNSGR---ANDAKNL 668
Query: 526 LIELEPNNTG 535
++E NT
Sbjct: 669 FDQMEQRNTA 678
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 128/518 (24%), Positives = 223/518 (43%), Gaps = 51/518 (9%)
Query: 56 TPNLVSWSAVIGGFTQ------NGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQK 109
PN S+SA G T NG D + A + P SS++ C
Sbjct: 29 NPNSKSFSAHFGHTTTTIKLKFNGPDSPKPTSIHTKPASDVNP--LPYSSLIQDCIDSNS 86
Query: 110 LSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVG 169
GK H + NG+ + +++ ++ +Y R G +
Sbjct: 87 FQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCL------------------------ 122
Query: 170 YCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEP 229
++ AR+LF++M +R + +WN+MI Y Y E ++ + G
Sbjct: 123 ----DDLCYARKLFEEMP----ERNLTAWNTMILAYARVDDYMEVLRLY-GRMRGSGNFS 173
Query: 230 TSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAF 289
FTF SV+ AC M + +++ + + GL + FVGGALV+ Y R+ + A +
Sbjct: 174 DKFTFPSVIKACIAMEDMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSL 233
Query: 290 DEIENIENLLGKMKEDGFEPNVYTWN-AMQLFSEMLSLDLTPDIYTVGIILSACSSLATM 348
DEIE + G+ + +W A +F ML + + PD +T L C +L +
Sbjct: 234 DEIEGTSVVTWNAVIAGY-VKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSR 292
Query: 349 ERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAY 408
+ GKQVH+ I CG+ D +G AL+DMYAKC + + + + V+ N++++A
Sbjct: 293 DGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAE 352
Query: 409 AMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSL 468
A GH + + F R+ SG++ + + S L A I G E + + +
Sbjct: 353 AQFGHFNDALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDI 412
Query: 469 KHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIE 528
+ +VD+ S+ G + EA++ + + + + V + ALL G V G A+ +E
Sbjct: 413 ILGSALVDMYSKCGMVEEAHQVFRSL-LERNEVSYNALLAGYVQEGK-------AEEALE 464
Query: 529 LEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMH 566
L + + + F + + A R + R++H
Sbjct: 465 LYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIH 502
>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 1005
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 189/562 (33%), Positives = 304/562 (54%), Gaps = 42/562 (7%)
Query: 37 GLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNART 96
GL +AL+ R+ E P++VSWSA+I Q G EA + RM+ G+ PN T
Sbjct: 379 GLAGDALKVFVRI-----EDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFT 433
Query: 97 LSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFS 156
L+S++ A L L G+ H + + GF + V N LV +Y +KI
Sbjct: 434 LASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMY---------MKI----- 479
Query: 157 IKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFS 216
G+V + +F+ R +ISWN+++SG+ DN D
Sbjct: 480 -----------------GSVQDGCRVFEAT----TNRDLISWNALLSGFHDNETCDTGLR 518
Query: 217 MFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMY 276
+F +L +G P +TF S+L +C+ ++ + GK++HA + L + FVG ALV+MY
Sbjct: 519 IFNQMLA-EGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMY 577
Query: 277 CRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVG 336
+ + L A+ F+ + + + G+ + A++ F +M + P+ +T+
Sbjct: 578 AKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLA 637
Query: 337 IILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTP 396
LS CS +AT++ G+Q+H+ AI+ G D+ + +ALVDMYAKCG ++ A + + + +
Sbjct: 638 SSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSR 697
Query: 397 DLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFF 456
D VS N ++ Y+ HG G + + F +L G PD ++F+ LSAC H G I+ G + F
Sbjct: 698 DTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHF 757
Query: 457 D-LMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
+ L Y + P+++HY CMVD+L RAG+ E FI+++ + + ++W +LG C HGN
Sbjct: 758 NSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGN 817
Query: 516 LEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIE 575
+EFG+ AA +L ELEP NY++L+N+FA G W D+ R M R + K PGCSW+E
Sbjct: 818 IEFGERAAMKLFELEPEIDSNYILLSNMFAAKGMWDDVTNVRALMSTRGVKKEPGCSWVE 877
Query: 576 DRDEIHKFRASDRSHDRSEEIY 597
++H F + D SH + EI+
Sbjct: 878 VNGQVHVFLSHDGSHPKIREIH 899
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 144/573 (25%), Positives = 247/573 (43%), Gaps = 105/573 (18%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KCGS + A KVF +PERD +V
Sbjct: 172 VYAKCGSANYACKVFGEIPERD------------------------------------VV 195
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A+I GF GY A+ + M+ EG+E N T ++ L AC+ L GK+ H
Sbjct: 196 SWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQVHAEA 255
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G S+ FV + LVD+Y +CG+M+ A ++F +N VS N ++ G+ + G+ +
Sbjct: 256 IKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGDAEKVL 315
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LF +M I + FT +VL
Sbjct: 316 NLFCRM------------------------------------TGSEINFSKFTLSTVLKG 339
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA+ +LR G+ +H+LAI +G + D F+ LV+MY + A F IE
Sbjct: 340 CANSGNLRAGQIVHSLAIRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIE------- 392
Query: 301 KMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSSLA 346
+P+V +W+A+ ++F M + P+ +T+ ++SA + L
Sbjct: 393 -------DPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSAATDLG 445
Query: 347 TMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLT 406
+ G+ +HA + G++ D + ALV MY K GS++ ++ + DL+S NA+L+
Sbjct: 446 DLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATTNRDLISWNALLS 505
Query: 407 AYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKP 466
+ + G+ F ++LA GF P+ +F+S L +C + G + + +
Sbjct: 506 GFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDG 565
Query: 467 SLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRL 526
+ T +VD+ ++ L +A ++ + D W ++ G G G+ A
Sbjct: 566 NDFVGTALVDMYAKNRFLEDAETIFNRL-IKRDLFAWTVIVAGYAQDGQ---GEKAVKCF 621
Query: 527 IELEPNNTG-NYVMLANLFAYAGRWSDLARTRQ 558
I+++ N LA+ + R + L RQ
Sbjct: 622 IQMQREGVKPNEFTLASSLSGCSRIATLDSGRQ 654
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 113/415 (27%), Positives = 181/415 (43%), Gaps = 37/415 (8%)
Query: 95 RTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSK 154
R S +L CA L+ GK HG + ++G + + N LV+VY +CG A K+F +
Sbjct: 129 RQYSGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGE 188
Query: 155 FSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEA 214
++ VS +I G+ G + A LF +M
Sbjct: 189 IPERDVVSWTALITGFVAEGYGSGAVNLFCEMR--------------------------- 221
Query: 215 FSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVE 274
R+G+E FT+ + L AC+ L GK++HA AI +G SD FVG ALV+
Sbjct: 222 ---------REGVEANEFTYATALKACSMCLDLEFGKQVHAEAIKVGDFSDLFVGSALVD 272
Query: 275 MYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYT 334
+Y + ++V A+ F + + +GF + LF M ++ +T
Sbjct: 273 LYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGDAEKVLNLFCRMTGSEINFSKFT 332
Query: 335 VGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS 394
+ +L C++ + G+ VH+ AIR G + D I LVDMY+KCG A + RI
Sbjct: 333 LSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIE 392
Query: 395 TPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSE 454
PD+VS +A++T G +E F+R+ SG P+ + S +SA G + G
Sbjct: 393 DPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYYGES 452
Query: 455 FFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
+ Y + +V + + G + + + D + W ALL G
Sbjct: 453 IHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEAT-TNRDLISWNALLSG 506
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 91/191 (47%), Gaps = 23/191 (12%)
Query: 338 ILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPD 397
+L C+S + GK +H I+ G + D H+ +LV++YAKCGS +A + I D
Sbjct: 134 MLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERD 193
Query: 398 LVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSAC-----------VHA 446
+VS A++T + G+G + F + G + ++ +AL AC VHA
Sbjct: 194 VVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQVHA 253
Query: 447 GSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGAL 506
+IK G +F DL + +VDL ++ GE+ A +P ++V W AL
Sbjct: 254 EAIKVG-DFSDLFV----------GSALVDLYAKCGEMVLAERVFLCMP-KQNAVSWNAL 301
Query: 507 LGGCVSHGNLE 517
L G G+ E
Sbjct: 302 LNGFAQMGDAE 312
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 91/195 (46%), Gaps = 19/195 (9%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNET-PNL 59
MY KCG ++DA+ VF + RD VSWN+++ + +G +AL+ E M LD T P+
Sbjct: 677 MYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAM--LDEGTVPDE 734
Query: 60 VSWSAVIGGFTQNGYDEEAIGMLFRM-QAEGLEPNARTLSSVLPACARLQKLSLGKEFHG 118
V++ V+ + G EE + + G+ P + ++ R K E
Sbjct: 735 VTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKF---HEVES 791
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGDM----LSALKIFSKFSIKNEVSCNTIIVGYCENG 174
+I SN + ++ + G++ +A+K+ F ++ E+ N I++
Sbjct: 792 FIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKL---FELEPEIDSNYILL-----S 843
Query: 175 NVAEARELFDQMEHL 189
N+ A+ ++D + ++
Sbjct: 844 NMFAAKGMWDDVTNV 858
>gi|297839569|ref|XP_002887666.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333507|gb|EFH63925.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 675
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 202/604 (33%), Positives = 332/604 (54%), Gaps = 46/604 (7%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y G + + F MMPERD SWN V++ A G + A + M D +V+
Sbjct: 83 YMNSGDKGTSLRFFDMMPERDGYSWNVVISGFAKAGELSVARRLFDAMPEKD-----VVT 137
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
++++ G+ NGY EEA+ + ++ +A TL++VL ACA L+ L GK+ H I
Sbjct: 138 LNSLLHGYILNGYSEEALRLFKELK---FSADAITLTTVLKACAELEALKRGKQIHAQIL 194
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
G + + + LV+VY +CGD+ A + + ++ S +T+I GY G V E+R
Sbjct: 195 IGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIGEPDDHSLSTLISGYANCGRVNESRR 254
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
LFD+ + R +I WNSMISGY+ N++ EA +F + MR+ S T +V+ AC
Sbjct: 255 LFDRKSN----RCVILWNSMISGYIANNMKFEALVLFNE--MRNETWEDSRTLAAVINAC 308
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL-- 299
+ L GK++H A GL D V L++MY + + A F E+E+ + +L
Sbjct: 309 IGLGFLETGKQMHCHACKFGLVDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLN 368
Query: 300 ---------GKMKEDG--FE----PNVYTWNAM--------------QLFSEMLSLDLTP 330
G++ + FE ++ +WN+M + FS+M LDL
Sbjct: 369 SMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCPVETLEYFSQMHKLDLPT 428
Query: 331 DIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAY 390
D ++ ++SAC+S++++ G+QV A A G DSD + ++L+D+Y KCGS+++ R +
Sbjct: 429 DEVSLSSVISACASISSLGLGEQVFARATIVGLDSDQIVSSSLIDLYCKCGSVENGRRVF 488
Query: 391 KRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIK 450
+ D V N+M++ YA +GHG E I F+++ +G RP I+F+ L+AC + G ++
Sbjct: 489 DTMVKSDEVPWNSMISGYATNGHGFEAIDLFKKMSIAGIRPTQITFMVVLTACNYCGLVE 548
Query: 451 TGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
G F+ M + P +H++CMVDLL+RAG + EA + ++++P D+ MW ++L G
Sbjct: 549 EGRLLFEAMKLDHGFVPDKEHFSCMVDLLARAGYVEEAIDLVEEMPFDADASMWSSVLRG 608
Query: 510 CVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSP 569
CV++G G+ A+++IELEP N+ YV L+ +FA +G W A R+ M++ + K+P
Sbjct: 609 CVANGYKAMGKKVAEKIIELEPENSVAYVQLSAIFATSGDWESSALVRKLMRENNVSKNP 668
Query: 570 GCSW 573
G SW
Sbjct: 669 GSSW 672
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/387 (27%), Positives = 200/387 (51%), Gaps = 12/387 (3%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KCG L A + + + E D S +++++ A G V E+ +R S+ ++
Sbjct: 211 VYAKCGDLRMASYMLEQIGEPDDHSLSTLISGYANCGRVNESRRLFDRKSN-----RCVI 265
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
W+++I G+ N EA+ + M+ E E ++RTL++V+ AC L L GK+ H +
Sbjct: 266 LWNSMISGYIANNMKFEALVLFNEMRNETWE-DSRTLAAVINACIGLGFLETGKQMHCHA 324
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G + + V + L+D+Y +CG + A K+FS+ + + N++I Y G + +A+
Sbjct: 325 CKFGLVDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAK 384
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+F+++E+ + +ISWNSM +G+ N E F + D + + SV+ A
Sbjct: 385 RVFERIEN----KSLISWNSMTNGFSQNGCPVETLEYFSQMHKLD-LPTDEVSLSSVISA 439
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA ++SL G+++ A A +GL SD V +L+++YC+ + + FD + + +
Sbjct: 440 CASISSLGLGEQVFARATIVGLDSDQIVSSSLIDLYCKCGSVENGRRVFDTMVKSDEVPW 499
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV-HAYAI 359
G+ N + + A+ LF +M + P T ++L+AC+ +E G+ + A +
Sbjct: 500 NSMISGYATNGHGFEAIDLFKKMSIAGIRPTQITFMVVLTACNYCGLVEEGRLLFEAMKL 559
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHA 386
G+ D + +VD+ A+ G ++ A
Sbjct: 560 DHGFVPDKEHFSCMVDLLARAGYVEEA 586
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 118/506 (23%), Positives = 222/506 (43%), Gaps = 96/506 (18%)
Query: 100 VLPACARLQKLSLGKEFHGYITRNGFMSNPFVV-NGLVDVYRRCGDMLSALKIFSKFSIK 158
+L +C+ + +L ++ +G + GF+S+ +V N L+ +Y R G M A +F + +
Sbjct: 12 LLQSCSNRNRETLWRQTNGLFLKKGFISSIVIVANHLLQIYSRSGKMGIARNLFDEMPER 71
Query: 159 NEVSCNTIIVGYCENGNVAEARELFDQME------------------HLGVQR------- 193
N S NT+I GY +G+ + FD M L V R
Sbjct: 72 NYFSWNTMIEGYMNSGDKGTSLRFFDMMPERDGYSWNVVISGFAKAGELSVARRLFDAMP 131
Query: 194 --GIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGK 251
+++ NS++ GY+ N +EA +F++L + T +VL ACA++ +L++GK
Sbjct: 132 EKDVVTLNSLLHGYILNGYSEEALRLFKEL----KFSADAITLTTVLKACAELEALKRGK 187
Query: 252 EIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI-----ENIENLL------G 300
+IHA + G++ D+ + +LV +Y + DL A ++I ++ L+ G
Sbjct: 188 QIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIGEPDDHSLSTLISGYANCG 247
Query: 301 KMKE--------------------DGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILS 340
++ E G+ N + A+ LF+EM + + D T+ +++
Sbjct: 248 RVNESRRLFDRKSNRCVILWNSMISGYIANNMKFEALVLFNEMRN-ETWEDSRTLAAVIN 306
Query: 341 ACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGS------------------ 382
AC L +E GKQ+H +A + G D+ + + L+DMY+KCGS
Sbjct: 307 ACIGLGFLETGKQMHCHACKFGLVDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTIL 366
Query: 383 -------------LKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGF 429
+ A+ ++RI L+S N+M ++ +G E + +F ++
Sbjct: 367 LNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCPVETLEYFSQMHKLDL 426
Query: 430 RPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYE 489
D +S S +SAC S+ G + F + + ++DL + G +
Sbjct: 427 PTDEVSLSSVISACASISSLGLGEQVFARATIVGLDSDQIVSSSLIDLYCKCGSVENGRR 486
Query: 490 FIKKIPMAPDSVMWGALLGGCVSHGN 515
+ + D V W +++ G ++G+
Sbjct: 487 VFDTM-VKSDEVPWNSMISGYATNGH 511
>gi|359482590|ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 648
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 200/554 (36%), Positives = 307/554 (55%), Gaps = 41/554 (7%)
Query: 51 SLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEG--LEPNARTLSSVLPACARLQ 108
SL ++PN S+++ F N +AI AE L P +S+L +C +
Sbjct: 31 SLQYQSPN-PSFTSSAPQFDNNQTHLKAIPSCSNPHAESTCLTPTYSNYASLLQSCIARK 89
Query: 109 KLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIV 168
+ GK+ H + GF + + LV++Y C D LS+
Sbjct: 90 AIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVC-DSLSS-------------------- 128
Query: 169 GYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIE 228
AR LFD++ + I WN +I GY N Y+ A ++ + G+
Sbjct: 129 ----------ARLLFDRIP----KHNIFLWNVLIRGYAWNGPYEAAVQLYYQMF-DYGLV 173
Query: 229 PTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMA 288
P +FTF VL ACA ++++ G+EIH + G + D FVG AL++MY + + +A+
Sbjct: 174 PDNFTFPFVLKACAALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREV 233
Query: 289 FDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATM 348
FD+I + +L + N + + L SEM+ L P T+ +SA + A +
Sbjct: 234 FDKILVRDAVLWNSMLAAYSQNGHPDACLSLCSEMVLTGLRPTEATLVTAISASADNAAL 293
Query: 349 ERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAY 408
+G+++H + R ++S + TALVDMYAKCGS++ AR ++R+ +VS NAM+T Y
Sbjct: 294 PQGRELHGLSWRQEFESHDKVKTALVDMYAKCGSVRVARNLFERLGVKRVVSWNAMITGY 353
Query: 409 AMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPS 467
AMHGH E + F + +PDHI+F+ LSAC H G ++ G FF+ M Y + P+
Sbjct: 354 AMHGHATEALDLFEEMNRVA-KPDHITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPT 412
Query: 468 LKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLI 527
++HYTCMVDLL +G L EAY I ++ + PDS +WGALL C H N+E G+IA +RLI
Sbjct: 413 VQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSGVWGALLNSCKIHANVELGEIALERLI 472
Query: 528 ELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASD 587
ELEP++ GNYV+L+N++A AG+W +A+ R+ M DRR+ KS CSWIE ++++H F + D
Sbjct: 473 ELEPDDAGNYVILSNIYAQAGKWEGVAKLRKLMTDRRLKKSIACSWIEVKNKVHAFLSGD 532
Query: 588 RSHDRSEEIYTIID 601
SH S+EIY+ ++
Sbjct: 533 TSHPLSDEIYSELE 546
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 130/296 (43%), Gaps = 40/296 (13%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG + A++VF + RD V WNS++ A
Sbjct: 220 MYAKCGCVGSAREVFDKILVRDAVLWNSMLAA---------------------------- 251
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
++QNG+ + + + M GL P TL + + A A L G+E HG
Sbjct: 252 --------YSQNGHPDACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLS 303
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R F S+ V LVD+Y +CG + A +F + +K VS N +I GY +G+ EA
Sbjct: 304 WRQEFESHDKVKTALVDMYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAMHGHATEAL 363
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+LF++M + + I++ ++S L +E + F ++ I+PT + ++
Sbjct: 364 DLFEEMNRVA-KPDHITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDL 422
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
L E + L + + + D+ V GAL+ + ++ ++A + + +E
Sbjct: 423 LGHSGRL---DEAYNLIMQMKVLPDSGVWGALLNSCKIHANVELGEIALERLIELE 475
>gi|449488546|ref|XP_004158080.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Cucumis sativus]
Length = 762
Score = 348 bits (894), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 212/667 (31%), Positives = 326/667 (48%), Gaps = 102/667 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWN------------------------------SVV 30
+Y + G L DA+ +F +P++D V WN SV
Sbjct: 102 LYAENGHLSDAQYLFDNIPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVT 161
Query: 31 TACAANGLVLEAL---------------------------------ECLERMSSLDNETP 57
AC + EA+ +CL+ L + P
Sbjct: 162 FACVLSVCASEAMLDLGTQLHGIAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLP 221
Query: 58 --NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKE 115
+LVSW+ +I G+ QNG EA + M + G++P++ T +S LP L L KE
Sbjct: 222 QSDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKE 281
Query: 116 FHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGN 175
HGYI R+ + + F+ + L+D+Y +C D+ A K + S + V C T
Sbjct: 282 IHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKNLCQSSSFDTVVCTT---------- 331
Query: 176 VAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFG 235
MISGYV N EA FR L+++ ++PTS TF
Sbjct: 332 -------------------------MISGYVLNGKNKEALEAFR-WLVQERMKPTSVTFS 365
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
S+ A A + +L GKE+H I L VG A+++MY + L A F+ I
Sbjct: 366 SIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEK 425
Query: 296 ENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVH 355
+ + N A+ LF +M D ++ LSAC++L + GK++H
Sbjct: 426 DAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEIH 485
Query: 356 AYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGK 415
I+ SD++ ++L+DMYAKCG+L +R + R+ + VS N++++AY HG K
Sbjct: 486 GLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQEKNEVSWNSIISAYGNHGDLK 545
Query: 416 EGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCM 474
E +A F +L +G +PDH++FL +SAC HAG + G ++ LM Y + ++HY C+
Sbjct: 546 ECLALFHEMLRNGIQPDHVTFLGIISACGHAGQVDEGIRYYHLMTEEYGIPARMEHYACV 605
Query: 475 VDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNT 534
D+ RAG L EA+E I +P PD+ +WG LLG C HGN+E ++A+ L +L+P N+
Sbjct: 606 ADMFGRAGRLHEAFETINSMPFPPDAGVWGTLLGACHIHGNVELAEVASKHLFDLDPLNS 665
Query: 535 GNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSE 594
G YV+LAN+ A AG+W + + R MK+R + K PG SWIE + H F A+D SH +
Sbjct: 666 GYYVLLANVQAGAGKWRKVLKVRSIMKERGVRKVPGYSWIEVNNATHMFVAADGSHPLTA 725
Query: 595 EIYTIID 601
+IY+++D
Sbjct: 726 QIYSVLD 732
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 114/454 (25%), Positives = 198/454 (43%), Gaps = 37/454 (8%)
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+ +I GFT G A+ +M G+ P+ T V+ AC L+ + +GK H +
Sbjct: 25 AWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYTFPYVVKACCGLKSVKMGKIVHETV 84
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
G + FV + L+ +Y G + A +F K+ V N ++ GY +NG+ A
Sbjct: 85 NLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQKDSVLWNVMLNGYVKNGDSGNAI 144
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
++F +M H I+P S TF VL
Sbjct: 145 KIFLEMRH------------------------------------SEIKPNSVTFACVLSV 168
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA L G ++H +A+ GL+ D+ V L+ MY + Q L AA+ FD + + +
Sbjct: 169 CASEAMLDLGTQLHGIAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLPQSDLVSW 228
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G+ N A LF M+S + PD T L + L +++ K++H Y IR
Sbjct: 229 NGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIR 288
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
DV + +AL+D+Y KC ++ A+ + S+ D V M++ Y ++G KE +
Sbjct: 289 HAVVLDVFLKSALIDIYFKCRDVEMAQKNLCQSSSFDTVVCTTMISGYVLNGKNKEALEA 348
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSR 480
FR ++ +P ++F S A ++ G E + + + ++D+ ++
Sbjct: 349 FRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAK 408
Query: 481 AGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
G L A +I D++ W +++ C +G
Sbjct: 409 CGRLDLACRVFNRI-TEKDAICWNSMITSCSQNG 441
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 152/286 (53%), Gaps = 5/286 (1%)
Query: 170 YCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEP 229
Y G++ +A+ LF ++ LG +WN MI G+ ++ A +F ++ G+ P
Sbjct: 2 YVRTGSLKDAKNLFYTLQ-LGCTS---AWNWMIRGFTMMGQFNYAL-LFYLKMLGAGVSP 56
Query: 230 TSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAF 289
+TF V+ AC + S++ GK +H +GL+ D FVG +L+++Y L AQ F
Sbjct: 57 DKYTFPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLF 116
Query: 290 DEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATME 349
D I +++L + +G+ N + NA+++F EM ++ P+ T +LS C+S A ++
Sbjct: 117 DNIPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLD 176
Query: 350 RGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYA 409
G Q+H A+ CG + D + L+ MY+KC L+ AR + + DLVS N +++ Y
Sbjct: 177 LGTQLHGIAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIISGYV 236
Query: 410 MHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEF 455
+G E FR ++++G +PD I+F S L S+K E
Sbjct: 237 QNGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEI 282
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 64/140 (45%), Gaps = 1/140 (0%)
Query: 376 MYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHIS 435
MY + GSLK A+ + + + N M+ + M G + + ++L +G PD +
Sbjct: 1 MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60
Query: 436 FLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIP 495
F + AC S+K G + + +K + + ++ L + G L +A IP
Sbjct: 61 FPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIP 120
Query: 496 MAPDSVMWGALLGGCVSHGN 515
DSV+W +L G V +G+
Sbjct: 121 QK-DSVLWNVMLNGYVKNGD 139
>gi|15223809|ref|NP_177827.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098688|sp|O49287.1|PP127_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g77010, mitochondrial; Flags: Precursor
gi|2829915|gb|AAC00623.1| Hypothetical protein [Arabidopsis thaliana]
gi|332197804|gb|AEE35925.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 695
Score = 348 bits (894), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 201/606 (33%), Positives = 325/606 (53%), Gaps = 46/606 (7%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y G + + F MMPERD SWN VV+ A G + A M D +V+
Sbjct: 103 YMNSGEKGTSLRFFDMMPERDGYSWNVVVSGFAKAGELSVARRLFNAMPEKD-----VVT 157
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
++++ G+ NGY EEA+ + + +A TL++VL ACA L+ L GK+ H I
Sbjct: 158 LNSLLHGYILNGYAEEALRLFKELN---FSADAITLTTVLKACAELEALKCGKQIHAQIL 214
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
G + + + LV+VY +CGD+ A + + ++ S + +I GY G V E+R
Sbjct: 215 IGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRG 274
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
LFD+ + R +I WNSMISGY+ N++ EA +F + MR+ S T +V+ AC
Sbjct: 275 LFDRKSN----RCVILWNSMISGYIANNMKMEALVLFNE--MRNETREDSRTLAAVINAC 328
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL-- 299
+ L GK++H A GL D V L++MY + + A F E+E+ + +L
Sbjct: 329 IGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLN 388
Query: 300 ---------GKMKE--------------------DGFEPNVYTWNAMQLFSEMLSLDLTP 330
G++ + +GF N T ++ F +M LDL
Sbjct: 389 SMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPT 448
Query: 331 DIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAY 390
D ++ ++SAC+S++++E G+QV A A G DSD + ++L+D+Y KCG ++H R +
Sbjct: 449 DEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVF 508
Query: 391 KRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIK 450
+ D V N+M++ YA +G G E I F+++ +G RP I+F+ L+AC + G ++
Sbjct: 509 DTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVE 568
Query: 451 TGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
G + F+ M + P +H++CMVDLL+RAG + EA ++++P D MW ++L G
Sbjct: 569 EGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRG 628
Query: 510 CVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSP 569
CV++G G+ AA+++IELEP N+ YV L+ +FA +G W A R+ M++ + K+P
Sbjct: 629 CVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFATSGDWESSALVRKLMRENNVTKNP 688
Query: 570 GCSWIE 575
G SW +
Sbjct: 689 GSSWTD 694
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 104/387 (26%), Positives = 200/387 (51%), Gaps = 12/387 (3%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KCG L A + + + E D S +++++ A G V E+ +R S+ ++
Sbjct: 231 VYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSN-----RCVI 285
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
W+++I G+ N EA+ + M+ E E ++RTL++V+ AC L L GK+ H +
Sbjct: 286 LWNSMISGYIANNMKMEALVLFNEMRNETRE-DSRTLAAVINACIGLGFLETGKQMHCHA 344
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G + + V + L+D+Y +CG + A K+FS+ + + N++I Y G + +A+
Sbjct: 345 CKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAK 404
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+F+++E+ + +ISWNSM +G+ N E F + D + + SV+ A
Sbjct: 405 RVFERIEN----KSLISWNSMTNGFSQNGCTVETLEYFHQMHKLD-LPTDEVSLSSVISA 459
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA ++SL G+++ A A +GL SD V +L+++YC+ + + FD + + +
Sbjct: 460 CASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPW 519
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV-HAYAI 359
G+ N + A+ LF +M + P T ++L+AC+ +E G+++ + +
Sbjct: 520 NSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKV 579
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHA 386
G+ D + +VD+ A+ G ++ A
Sbjct: 580 DHGFVPDKEHFSCMVDLLARAGYVEEA 606
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 117/505 (23%), Positives = 218/505 (43%), Gaps = 96/505 (19%)
Query: 100 VLPACARLQKLSLGKEFHGYITRNGFMSNPFVV-NGLVDVYRRCGDMLSALKIFSKFSIK 158
+L +C+ + +L ++ +G + + GF+S+ +V N L+ +Y R G M A +F + +
Sbjct: 32 LLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDR 91
Query: 159 NEVSCNTIIVGYCENGNVAEARELFDQME------------------HLGVQR------- 193
N S NT+I GY +G + FD M L V R
Sbjct: 92 NYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNVVVSGFAKAGELSVARRLFNAMP 151
Query: 194 --GIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGK 251
+++ NS++ GY+ N +EA +F++L + T +VL ACA++ +L+ GK
Sbjct: 152 EKDVVTLNSLLHGYILNGYAEEALRLFKEL----NFSADAITLTTVLKACAELEALKCGK 207
Query: 252 EIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL-----------LG 300
+IHA + G++ D+ + +LV +Y + DL A ++I ++ G
Sbjct: 208 QIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCG 267
Query: 301 KMKE--------------------DGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILS 340
++ E G+ N A+ LF+EM + + D T+ +++
Sbjct: 268 RVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRN-ETREDSRTLAAVIN 326
Query: 341 ACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGS------------------ 382
AC L +E GKQ+H +A + G D+ + + L+DMY+KCGS
Sbjct: 327 ACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTIL 386
Query: 383 -------------LKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGF 429
+ A+ ++RI L+S N+M ++ +G E + +F ++
Sbjct: 387 LNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDL 446
Query: 430 RPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYE 489
D +S S +SAC S++ G + F + + ++DL + G +
Sbjct: 447 PTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRR 506
Query: 490 FIKKIPMAPDSVMWGALLGGCVSHG 514
+ + D V W +++ G ++G
Sbjct: 507 VFDTM-VKSDEVPWNSMISGYATNG 530
>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
Length = 820
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 199/602 (33%), Positives = 309/602 (51%), Gaps = 73/602 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGS+ DA++VF M RD V
Sbjct: 189 MYAKCGSVRDARRVFDAMASRD------------------------------------EV 212
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ + G + ++GY +E++ M EG+ P+ T +VL AC L L GK+ H I
Sbjct: 213 SWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQI 272
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ S+ V L +Y +CG V +AR
Sbjct: 273 VESEHHSDVRVSTALTKMYIKCG-------------------------------AVKDAR 301
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
E+F+ + + R +I+WN+MI G VD+ +EA MF +L ++ + P T+ ++L A
Sbjct: 302 EVFECLPN----RDVIAWNTMIGGLVDSGQLEEAHGMFHRML-KECVAPDRVTYLAILSA 356
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA L GKEIHA A+ GL SD G AL+ MY + + A+ FD + + +
Sbjct: 357 CARPGGLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSW 416
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G+ + F +ML + + T +L ACS+ ++ GK++HA ++
Sbjct: 417 TALVGGYADCGQVVESFSTFKKMLQQGVEANKITYMCVLKACSNPVALKWGKEIHAEVVK 476
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
G +D+ + AL+ MY KCGS++ A + +ST D+V+ N ++ A +G G E +
Sbjct: 477 AGIFADLAVANALMSMYFKCGSVEDAIRVSEGMSTRDVVTWNTLIGGLAQNGRGLEALQK 536
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGS-EFFDLMAYYDVKPSLKHYTCMVDLLS 479
F + + RP+ +F++ +SAC ++ G +F + Y + P+ KHY CMVD+L+
Sbjct: 537 FEVMKSEEMRPNATTFVNVMSACRVRNLVEEGRRQFASMRKDYGIVPTEKHYACMVDILA 596
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
RAG LGEA + I +P P + MWGALL C +HGN+E G+ AA++ ++LEP N G YV
Sbjct: 597 RAGHLGEAEDVILTMPFKPSAAMWGALLAACRAHGNVEIGEQAAEQCLKLEPQNAGTYVS 656
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTI 599
L+ ++A AG W D+A+ R+ MK+R + K PG SWIE E+H F A D+SH R+EEIY+
Sbjct: 657 LSFIYAAAGMWRDVAKLRKLMKERGVKKEPGRSWIEVAGEVHSFVAGDQSHPRTEEIYSE 716
Query: 600 ID 601
++
Sbjct: 717 LE 718
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 126/436 (28%), Positives = 218/436 (50%), Gaps = 37/436 (8%)
Query: 81 MLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYR 140
+L + +G + ++ +L +C + + L++GK+ H +I R G N +++N L+ +Y
Sbjct: 31 VLQYLHQKGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYV 90
Query: 141 RCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNS 200
CG +V EAR LFD+ + + ++SWN
Sbjct: 91 HCG-------------------------------SVNEARRLFDKFSN----KSVVSWNV 115
Query: 201 MISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIAL 260
MISGY L EAF++F L+ ++G+EP FTF S+L AC+ +L G+E+H +
Sbjct: 116 MISGYAHRGLGQEAFNLF-TLMQQEGLEPDKFTFVSILSACSSPAALNWGREVHVRVMEA 174
Query: 261 GLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLF 320
GL ++ VG AL+ MY + + A+ FD + + + + + + Y +++ +
Sbjct: 175 GLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYAQESLKTY 234
Query: 321 SEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKC 380
ML + P T +LSAC SLA +E+GKQ+HA + + SDV + TAL MY KC
Sbjct: 235 HAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKC 294
Query: 381 GSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSAL 440
G++K AR ++ + D+++ N M+ G +E F R+L PD +++L+ L
Sbjct: 295 GAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAIL 354
Query: 441 SACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDS 500
SAC G + G E + ++ ++++ S+AG + +A + ++P D
Sbjct: 355 SACARPGGLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMP-KRDV 413
Query: 501 VMWGALLGGCVSHGNL 516
V W AL+GG G +
Sbjct: 414 VSWTALVGGYADCGQV 429
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 141/500 (28%), Positives = 234/500 (46%), Gaps = 44/500 (8%)
Query: 37 GLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNART 96
G V EA ++ S+ ++VSW+ +I G+ G +EA + MQ EGLEP+ T
Sbjct: 93 GSVNEARRLFDKFSN-----KSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFT 147
Query: 97 LSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFS 156
S+L AC+ L+ G+E H + G +N V N L+ +Y +CG
Sbjct: 148 FVSILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCG------------- 194
Query: 157 IKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFS 216
+V +AR +FD M R +SW ++ Y ++ E+
Sbjct: 195 ------------------SVRDARRVFDAM----ASRDEVSWTTLTGAYAESGYAQESLK 232
Query: 217 MFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMY 276
+ +L ++G+ P+ T+ +VL AC + +L KGK+IHA + SD V AL +MY
Sbjct: 233 TYHAML-QEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVSTALTKMY 291
Query: 277 CRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVG 336
+ + A+ F+ + N + + G + A +F ML + PD T
Sbjct: 292 IKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYL 351
Query: 337 IILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTP 396
ILSAC+ + GK++HA A++ G SDV G AL++MY+K GS+K AR + R+
Sbjct: 352 AILSACARPGGLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKR 411
Query: 397 DLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFF 456
D+VS A++ YA G E + F+++L G + I+++ L AC + ++K G E
Sbjct: 412 DVVSWTALVGGYADCGQVVESFSTFKKMLQQGVEANKITYMCVLKACSNPVALKWGKEIH 471
Query: 457 DLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN- 515
+ + L ++ + + G + +A + + D V W L+GG +G
Sbjct: 472 AEVVKAGIFADLAVANALMSMYFKCGSVEDAIRVSEGMS-TRDVVTWNTLIGGLAQNGRG 530
Query: 516 LE-FGQIAADRLIELEPNNT 534
LE + + E+ PN T
Sbjct: 531 LEALQKFEVMKSEEMRPNAT 550
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 147/296 (49%), Gaps = 1/296 (0%)
Query: 222 LMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQD 281
L + G + S+ + +L +C L GK++H + G++ + ++ L+++Y
Sbjct: 35 LHQKGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGS 94
Query: 282 LVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSA 341
+ A+ FD+ N + + G+ A LF+ M L PD +T ILSA
Sbjct: 95 VNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSA 154
Query: 342 CSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQ 401
CSS A + G++VH + G ++ +G AL+ MYAKCGS++ AR + +++ D VS
Sbjct: 155 CSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSW 214
Query: 402 NAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY 461
+ AYA G+ +E + + +L G RP I++++ LSAC +++ G + +
Sbjct: 215 TTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVE 274
Query: 462 YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
+ ++ T + + + G + +A E + +P D + W ++GG V G LE
Sbjct: 275 SEHHSDVRVSTALTKMYIKCGAVKDAREVFECLP-NRDVIAWNTMIGGLVDSGQLE 329
>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 1047
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 201/628 (32%), Positives = 335/628 (53%), Gaps = 73/628 (11%)
Query: 6 GSLDDAKKVFKMM----PERDCVSWNSVVTACAANG--------------------LVLE 41
G D A ++FK M + DCV+ S+++AC++ G ++LE
Sbjct: 351 GYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILE 410
Query: 42 A------LECLERMSS----LDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLE 91
++C + ++ L ET N+V W+ ++ + E+ + +MQ EG+E
Sbjct: 411 GALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIE 470
Query: 92 PNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKI 151
PN T S+L C+ L+ + LG++ H + + GF N +V + L+D+Y + G + ALKI
Sbjct: 471 PNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKI 530
Query: 152 FSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLY 211
F + ++ ++SW +MI+GY + +
Sbjct: 531 FRRLK-----------------------------------EKDVVSWTAMIAGYAQHEKF 555
Query: 212 DEAFSMFRDLLMRD-GIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGG 270
EA ++F++ M+D GI + F S + ACA + +L +G++IHA A G D VG
Sbjct: 556 AEALNLFKE--MQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQACVSGYSDDLSVGN 613
Query: 271 ALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTP 330
ALV +Y R + A AFD+I + +N+ GF + + A+ LFS+M
Sbjct: 614 ALVSLYARCGKVRDAYFAFDKIFSKDNISWNSLISGFAQSGHCEEALSLFSQMSKAGQEI 673
Query: 331 DIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAY 390
+ +T G +SA +++A ++ GKQ+HA I+ G+DS+ + L+ +YAKCG++ A +
Sbjct: 674 NSFTFGPAVSAAANVANVKLGKQIHAMIIKTGHDSETEVSNVLITLYAKCGNIDDAERQF 733
Query: 391 KRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIK 450
+ + +S NAMLT Y+ HGHG + ++ F + G P+H++F+ LSAC H G +
Sbjct: 734 FEMPEKNEISWNAMLTGYSQHGHGFKALSLFEDMKQLGVLPNHVTFVGVLSACSHVGLVD 793
Query: 451 TGSEFFDLM-AYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
G ++F M + + P +HY C+VDLL R+G L A F++++P+ PD+++ LL
Sbjct: 794 EGIKYFQSMREVHGLVPKPEHYACVVDLLGRSGLLSRARRFVEEMPIQPDAMVCRTLLSA 853
Query: 510 CVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSP 569
C+ H N++ G+ AA L+ELEP ++ YV+L+N++A G+W RTRQ MKDR + K P
Sbjct: 854 CIVHKNIDIGEFAASHLLELEPKDSATYVLLSNMYAVTGKWGCRDRTRQMMKDRGVKKEP 913
Query: 570 GCSWIEDRDEIHKFRASDRSHDRSEEIY 597
G SWIE + +H F A D+ H ++IY
Sbjct: 914 GRSWIEVNNSVHAFFAGDQKHPNVDKIY 941
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 145/531 (27%), Positives = 239/531 (45%), Gaps = 101/531 (19%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y K G L+ AKKVF + +RD VS
Sbjct: 214 LYFKNGFLNSAKKVFDGLQKRDSVS----------------------------------- 238
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
W A++ G +Q+G +EEA+ + +M G+ P SSVL AC +++ +G++ HG +
Sbjct: 239 -WVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLV 297
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ GF +V CN ++ Y GN A
Sbjct: 298 LKQGFSLETYV-------------------------------CNALVTLYSRLGNFIPAE 326
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
++F+ M +QR +S+NS+ISG D+A +F+ + + D ++P T S+L A
Sbjct: 327 QVFNAM----LQRDEVSYNSLISGLSQQGYSDKALELFKKMCL-DCLKPDCVTVASLLSA 381
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C+ + +L GK+ H+ AI G+ SD + GAL+++Y + D+ A F E
Sbjct: 382 CSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTET------ 435
Query: 301 KMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSSLA 346
NV WN M ++F++M + P+ +T IL CSSL
Sbjct: 436 --------ENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLR 487
Query: 347 TMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLT 406
++ G+Q+H ++ G+ +V++ + L+DMYAK G L HA ++R+ D+VS AM+
Sbjct: 488 AVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIA 547
Query: 407 AYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKP 466
YA H E + F+ + G D+I F SA+SAC ++ G +
Sbjct: 548 GYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQACVSGYSD 607
Query: 467 SLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
L +V L +R G++ +AY KI + D++ W +L+ G G+ E
Sbjct: 608 DLSVGNALVSLYARCGKVRDAYFAFDKI-FSKDNISWNSLISGFAQSGHCE 657
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 118/456 (25%), Positives = 211/456 (46%), Gaps = 38/456 (8%)
Query: 59 LVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQ-KLSLGKEFH 117
L W+ V+ F +G+ RM E ++P+ RT + VL C ++ H
Sbjct: 134 LSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTYAGVLRGCGGGDVPFHCVEKIH 193
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
+G+ ++ FV N L+D+Y + NG +
Sbjct: 194 ARTITHGYENSLFVCNPLIDLYFK-------------------------------NGFLN 222
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
A+++FD ++ +R +SW +M+SG + +EA +F + G+ PT + F SV
Sbjct: 223 SAKKVFDGLQ----KRDSVSWVAMLSGLSQSGCEEEAVLLFCQM-HTSGVYPTPYIFSSV 277
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
L AC + + G+++H L + G +T+V ALV +Y R + + A+ F+ + +
Sbjct: 278 LSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDE 337
Query: 298 LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAY 357
+ G Y+ A++LF +M L PD TV +LSACSS+ + GKQ H+Y
Sbjct: 338 VSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSY 397
Query: 358 AIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEG 417
AI+ G SD+ + AL+D+Y KC +K A + T ++V N ML AY + + E
Sbjct: 398 AIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNES 457
Query: 418 IAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDL 477
F ++ G P+ ++ S L C ++ G + + + ++ + ++D+
Sbjct: 458 FKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDM 517
Query: 478 LSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSH 513
++ G+L A + +++ D V W A++ G H
Sbjct: 518 YAKLGKLDHALKIFRRLK-EKDVVSWTAMIAGYAQH 552
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 106/419 (25%), Positives = 181/419 (43%), Gaps = 86/419 (20%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G LD A K+F+ + E+D VSW +
Sbjct: 517 MYAKLGKLDHALKIFRRLKEKDVVSWTA-------------------------------- 544
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+I G+ Q+ EA+ + MQ +G+ + +S + ACA +Q L+ G++ H
Sbjct: 545 ----MIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQA 600
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+G+ + V N LV +Y RCG + A F K K+ +S N++I G+ ++G+ EA
Sbjct: 601 CVSGYSDDLSVGNALVSLYARCGKVRDAYFAFDKIFSKDNISWNSLISGFAQSGHCEEAL 660
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LF QM + G E SFTFG + A
Sbjct: 661 SLFSQMS------------------------------------KAGQEINSFTFGPAVSA 684
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
A++ +++ GK+IHA+ I G S+T V L+ +Y + ++ A+ F E+ +
Sbjct: 685 AANVANVKLGKQIHAMIIKTGHDSETEVSNVLITLYAKCGNIDDAERQFFEMPEKNEISW 744
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG-------KQ 353
G+ + + + A+ LF +M L + P+ T +LSACS + ++ G ++
Sbjct: 745 NAMLTGYSQHGHGFKALSLFEDMKQLGVLPNHVTFVGVLSACSHVGLVDEGIKYFQSMRE 804
Query: 354 VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNAMLTAYAMH 411
VH + + + V VD+ + G L AR + + PD + +L+A +H
Sbjct: 805 VHGLVPKPEHYACV------VDLLGRSGLLSRARRFVEEMPIQPDAMVCRTLLSACIVH 857
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 123/300 (41%), Gaps = 6/300 (2%)
Query: 218 FRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYC 277
F L+ G+ S T+ +L C G ++H + +G ++ + L+++Y
Sbjct: 55 FLHLMEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCAEVVLCERLMDLYI 114
Query: 278 RYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGI 337
+ DL A FDE+ F + LF ML + PD T
Sbjct: 115 AFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTYAG 174
Query: 338 ILSAC-SSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTP 396
+L C +++HA I GY++ + + L+D+Y K G L A+ + +
Sbjct: 175 VLRGCGGGDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKR 234
Query: 397 DLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFF 456
D VS AML+ + G +E + F ++ SG P F S LSAC K G +
Sbjct: 235 DSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLH 294
Query: 457 DLMAYYDVKPSLKHYTC--MVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
L+ SL+ Y C +V L SR G A + + + D V + +L+ G G
Sbjct: 295 GLVLKQGF--SLETYVCNALVTLYSRLGNFIPAEQVFNAM-LQRDEVSYNSLISGLSQQG 351
>gi|449469198|ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
gi|449484855|ref|XP_004156999.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
Length = 724
Score = 348 bits (893), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 189/521 (36%), Positives = 300/521 (57%), Gaps = 10/521 (1%)
Query: 77 EAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLV 136
EA+ +L+R++ +P A ++L C + + L GK+ H +I +G + ++ N L+
Sbjct: 106 EAVQLLYRIE----KPYASIYLTLLKFCLKQRALKEGKQVHAHIKTSGSIG-LYISNRLL 160
Query: 137 DVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGII 196
D+Y +CG ++ A K+F + ++ S N +I GY + GN +AR LFD+M + R
Sbjct: 161 DMYAKCGSLVDAEKVFDEMVHRDLCSWNIMISGYVKGGNFEKARNLFDKMPN----RDNF 216
Query: 197 SWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHAL 256
SW ++ISG V ++ +EA ++R + D + T S L A A + SL GK+IH
Sbjct: 217 SWTAIISGCVQHNRPEEALELYRLMQKHDYSKSNKCTISSALAASAAIPSLHMGKKIHGH 276
Query: 257 AIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNA 316
+ +GL SD V +L++MY + + A+ FD++E + + + N
Sbjct: 277 IMRMGLDSDEVVWCSLLDMYGKCGSIEEARYIFDKMEERDVVSWTTMIHTYLKNGRREEG 336
Query: 317 MQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDM 376
LF +++ ++ P+ +T +L+AC+ LA + GKQ+HAY +R G+DS +ALV M
Sbjct: 337 FALFRHLMNSNIMPNDFTFAGVLNACADLAAEDLGKQIHAYMVRVGFDSFSSAASALVHM 396
Query: 377 YAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISF 436
Y+KCG +++A+ ++ + PDL S ++L YA HG + + F +L SG +PD I+F
Sbjct: 397 YSKCGDIENAKSVFEILPQPDLFSWTSLLVGYAQHGQHDKALHFFELLLKSGTKPDGIAF 456
Query: 437 LSALSACVHAGSIKTGSEFF-DLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIP 495
+ LSAC HAG + G E+F + + + ++ HY C++DLL+RAG+ EA I ++P
Sbjct: 457 IGVLSACAHAGLVDKGLEYFHSIKEKHGLTRTIDHYACIIDLLARAGQFTEAESIINEMP 516
Query: 496 MAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLAR 555
+ PD +W ALLGGC HGNLE + AA L E+EP N YV LAN++A AG ++ A
Sbjct: 517 IKPDKYIWAALLGGCRIHGNLELAKRAAKSLFEIEPENPATYVTLANIYASAGMRAEEAN 576
Query: 556 TRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEI 596
R+ M R + K PG SWIE R E+H F D SH +S+EI
Sbjct: 577 IRETMDSRGIVKKPGMSWIEIRREVHVFSVGDNSHPKSKEI 617
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 123/430 (28%), Positives = 189/430 (43%), Gaps = 72/430 (16%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGSL DA+KVF M RD SWN +++ G +A ++M + DN
Sbjct: 162 MYAKCGSLVDAEKVFDEMVHRDLCSWNIMISGYVKGGNFEKARNLFDKMPNRDN-----F 216
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGL-EPNARTLSSVLPACARLQKLSLGKEFHGY 119
SW+A+I G Q+ EEA+ + MQ + N T+SS L A A + L +GK+ HG+
Sbjct: 217 SWTAIISGCVQHNRPEEALELYRLMQKHDYSKSNKCTISSALAASAAIPSLHMGKKIHGH 276
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
I R G S+ V L+D+Y +CG + A IF K ++ VS T+I Y +NG
Sbjct: 277 IMRMGLDSDEVVWCSLLDMYGKCGSIEEARYIFDKMEERDVVSWTTMIHTYLKNGR---- 332
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
+E F++FR LM I P FTF VL
Sbjct: 333 -------------------------------REEGFALFRH-LMNSNIMPNDFTFAGVLN 360
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
ACAD+ + GK+IHA + +G S + ALV MY + D+ A+ F+ +
Sbjct: 361 ACADLAAEDLGKQIHAYMVRVGFDSFSSAASALVHMYSKCGDIENAKSVFEILP------ 414
Query: 300 GKMKEDGFEPNVYTWN--------------AMQLFSEMLSLDLTPDIYTVGIILSACSSL 345
+P++++W A+ F +L PD +LSAC+
Sbjct: 415 --------QPDLFSWTSLLVGYAQHGQHDKALHFFELLLKSGTKPDGIAFIGVLSACAHA 466
Query: 346 ATMERGKQ-VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNA 403
+++G + H+ + G + ++D+ A+ G A + PD A
Sbjct: 467 GLVDKGLEYFHSIKEKHGLTRTIDHYACIIDLLARAGQFTEAESIINEMPIKPDKYIWAA 526
Query: 404 MLTAYAMHGH 413
+L +HG+
Sbjct: 527 LLGGCRIHGN 536
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 73/182 (40%), Gaps = 38/182 (20%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG +++AK VF+++P+ D SW S++
Sbjct: 396 MYSKCGDIENAKSVFEILPQPDLFSWTSLLV----------------------------- 426
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKE-FHGY 119
G+ Q+G ++A+ + G +P+ VL ACA + G E FH
Sbjct: 427 -------GYAQHGQHDKALHFFELLLKSGTKPDGIAFIGVLSACAHAGLVDKGLEYFHSI 479
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCE-NGNVAE 178
++G ++D+ R G A I ++ IK + ++G C +GN+
Sbjct: 480 KEKHGLTRTIDHYACIIDLLARAGQFTEAESIINEMPIKPDKYIWAALLGGCRIHGNLEL 539
Query: 179 AR 180
A+
Sbjct: 540 AK 541
>gi|326507326|dbj|BAJ95740.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 798
Score = 348 bits (893), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 210/631 (33%), Positives = 328/631 (51%), Gaps = 44/631 (6%)
Query: 4 KCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWS 63
K G + A+ +F MPER+ VS+ ++V A G V EA+E E+ S ++ ++
Sbjct: 163 KAGDIASARGLFDGMPERNVVSYTTMVDALMKRGRVAEAVELYEQCPS-----GSVAFFT 217
Query: 64 AVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY-ITR 122
A I GF +N A+G+ +M + G+ PN T ++ AC + L G I
Sbjct: 218 ATISGFVRNELHHNALGVFRKMVSCGVRPNGITFVCMIKACVGAGEFGLAMSIVGSAIKS 277
Query: 123 NGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAREL 182
N F S+ V N L+ +Y R GD +A K+F + +K+ VS ++ Y E+G++ AR +
Sbjct: 278 NFFESSIEVQNSLITLYLRMGDAAAARKVFDEMDVKDVVSWTALLDVYSESGDLDGARRV 337
Query: 183 FDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACA 242
D M +R +SW ++I+ + EA ++ +L DG P F SVL ACA
Sbjct: 338 LDAMP----ERNEVSWGTLIARHEQRGNAAEAVKLYSQMLA-DGCRPNISCFSSVLSACA 392
Query: 243 DMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL--- 299
+ LR G IHA ++ +G ++ FV +L++MYC+ + AQ FD + +N++
Sbjct: 393 TLEDLRGGARIHARSLKMGSSTNVFVSSSLIDMYCKCKKCRDAQTIFDTLPE-KNIVCWN 451
Query: 300 ---------GKMKEDGF------EPNVYTWN--------------AMQLFSEMLSLDLTP 330
GKM E + N+ +WN A++ F+ ML+ P
Sbjct: 452 SLASGYSYNGKMVEAMYLFKKMPARNLASWNTIISGYAQNRQFVDALRSFNAMLASGQVP 511
Query: 331 DIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAY 390
T +L AC++L ++ GK HA I+ G + + IGTAL DMYAK G L+ ++ +
Sbjct: 512 GEITFSSVLLACANLCSLVTGKMAHAKTIKLGMEESIFIGTALSDMYAKSGDLQSSKRMF 571
Query: 391 KRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIK 450
++ + V+ AM+ A +G +E I ++A+G P+ +FL+ L AC H G ++
Sbjct: 572 YQMPERNDVTWTAMIQGLAENGFAEESILLLEDMMATGMTPNEHTFLALLFACSHGGLVE 631
Query: 451 TGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGC 510
+F+ M + + P KHYTCMVD+L+RAG L EA + K P ++ W ALL C
Sbjct: 632 QAIHYFEKMQAWGISPKEKHYTCMVDVLARAGRLIEAEALLMKTPSKSEANSWAALLSAC 691
Query: 511 VSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPG 570
++ N E G+ AA RL EL +NT YV+L+N++A GRW D AR R MK + K G
Sbjct: 692 NTYKNEEIGERAAKRLHELGKDNTAGYVLLSNMYASCGRWKDAARIRVLMKGTTLKKDGG 751
Query: 571 CSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
CSW++ R + H F + + H S EI I+D
Sbjct: 752 CSWVQVRGQYHAFFSWEAKHPLSMEINEILD 782
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 131/408 (32%), Positives = 197/408 (48%), Gaps = 11/408 (2%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y + G A+KVF M +D VSW +++ + +G + A L+ M N V
Sbjct: 293 LYLRMGDAAAARKVFDEMDVKDVVSWTALLDVYSESGDLDGARRVLDAMPE-----RNEV 347
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW +I Q G EA+ + +M A+G PN SSVL ACA L+ L G H
Sbjct: 348 SWGTLIARHEQRGNAAEAVKLYSQMLADGCRPNISCFSSVLSACATLEDLRGGARIHARS 407
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G +N FV + L+D+Y +C A IF KN V N++ GY NG + EA
Sbjct: 408 LKMGSSTNVFVSSSLIDMYCKCKKCRDAQTIFDTLPEKNIVCWNSLASGYSYNGKMVEAM 467
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LF +M R + SWN++ISGY N + +A F +L G P TF SVL+A
Sbjct: 468 YLFKKMP----ARNLASWNTIISGYAQNRQFVDALRSFNAMLA-SGQVPGEITFSSVLLA 522
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA++ SL GK HA I LG++ F+G AL +MY + DL +++ F ++ ++
Sbjct: 523 CANLCSLVTGKMAHAKTIKLGMEESIFIGTALSDMYAKSGDLQSSKRMFYQMPERNDVTW 582
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G N + ++ L +M++ +TP+ +T +L ACS +E+
Sbjct: 583 TAMIQGLAENGFAEESILLLEDMMATGMTPNEHTFLALLFACSHGGLVEQAIHYFEKMQA 642
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHAR-LAYKRISTPDLVSQNAMLTA 407
G T +VD+ A+ G L A L K S + S A+L+A
Sbjct: 643 WGISPKEKHYTCMVDVLARAGRLIEAEALLMKTPSKSEANSWAALLSA 690
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 122/484 (25%), Positives = 213/484 (44%), Gaps = 74/484 (15%)
Query: 127 SNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQM 186
++PF + +V + + GD+ SA +F +N VS T++ + G VAEA EL++Q
Sbjct: 149 ASPFTYDFMVHEHVKAGDIASARGLFDGMPERNVVSYTTMVDALMKRGRVAEAVELYEQC 208
Query: 187 EHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNS 246
+ + + ISG+V N L+ A +FR ++ G+ P TF ++ AC
Sbjct: 209 P----SGSVAFFTATISGFVRNELHHNALGVFRKMV-SCGVRPNGITFVCMIKACVGAGE 263
Query: 247 LRKGKEIHALAIALG-LQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE-----NIENLLG 300
I AI +S V +L+ +Y R D AA+ FDE++ + LL
Sbjct: 264 FGLAMSIVGSAIKSNFFESSIEVQNSLITLYLRMGDAAAARKVFDEMDVKDVVSWTALLD 323
Query: 301 KMKEDG------------FEPNVYTW--------------NAMQLFSEMLSLDLTPDIYT 334
E G E N +W A++L+S+ML+ P+I
Sbjct: 324 VYSESGDLDGARRVLDAMPERNEVSWGTLIARHEQRGNAAEAVKLYSQMLADGCRPNISC 383
Query: 335 VGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKC-------------- 380
+LSAC++L + G ++HA +++ G ++V + ++L+DMY KC
Sbjct: 384 FSSVLSACATLEDLRGGARIHARSLKMGSSTNVFVSSSLIDMYCKCKKCRDAQTIFDTLP 443
Query: 381 -----------------GSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRR 423
G + A +K++ +L S N +++ YA + + + F
Sbjct: 444 EKNIVCWNSLASGYSYNGKMVEAMYLFKKMPARNLASWNTIISGYAQNRQFVDALRSFNA 503
Query: 424 ILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGE 483
+LASG P I+F S L AC + S+ TG ++ S+ T + D+ +++G+
Sbjct: 504 MLASGQVPGEITFSSVLLACANLCSLVTGKMAHAKTIKLGMEESIFIGTALSDMYAKSGD 563
Query: 484 LGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIE--LEPNNTGNYVMLA 541
L + ++P D V W A++ G +G E + + ++ + PN + LA
Sbjct: 564 LQSSKRMFYQMPERND-VTWTAMIQGLAENGFAEESILLLEDMMATGMTPN---EHTFLA 619
Query: 542 NLFA 545
LFA
Sbjct: 620 LLFA 623
>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Vitis vinifera]
Length = 681
Score = 348 bits (893), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 197/603 (32%), Positives = 305/603 (50%), Gaps = 74/603 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG LD A K+F MP+R NLV
Sbjct: 49 MYSKCGELDHALKLFDTMPQR------------------------------------NLV 72
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A+I G +QN EAI M+ G P SS + ACA L + +GK+ H
Sbjct: 73 SWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLA 132
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G S FV + L D+Y +CG M A K+F + K+EVS +I GY + G EA
Sbjct: 133 LKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEAL 192
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
F +M DE ++ + +L S L A
Sbjct: 193 LAFKKM------------------------IDEEVTIDQHVLC------------STLGA 216
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C + + + G+ +H+ + LG +SD FVG AL +MY + D+ +A F N++
Sbjct: 217 CGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVS 276
Query: 301 -KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
DG+ + +F E+ + P+ +T ++ AC++ A +E+G Q+HA +
Sbjct: 277 YTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVM 336
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
+ +D D + + LVDMY KCG L+ A A+ I P ++ N++++ + HG GK+ I
Sbjct: 337 KINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIK 396
Query: 420 HFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMVDLL 478
F R++ G +P+ I+F+S L+ C HAG ++ G ++F M Y V P +HY+C++DLL
Sbjct: 397 IFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLL 456
Query: 479 SRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYV 538
RAG L EA EFI ++P P++ W + LG C HG+ E G++AA++L++LEP N+G V
Sbjct: 457 GRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALV 516
Query: 539 MLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYT 598
+L+N++A +W D+ R +M+D + K PG SW++ + H F A D SH R IY
Sbjct: 517 LLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFGAEDWSHPRKSAIYE 576
Query: 599 IID 601
+D
Sbjct: 577 KLD 579
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 113/425 (26%), Positives = 202/425 (47%), Gaps = 42/425 (9%)
Query: 93 NARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIF 152
+ L+ V+ A+ ++L GK+ H + G+ F+ N LV++Y +CG++ ALK
Sbjct: 4 DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALK-- 61
Query: 153 SKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYD 212
LFD M QR ++SW +MISG NS +
Sbjct: 62 -----------------------------LFDTMP----QRNLVSWTAMISGLSQNSKFS 88
Query: 213 EAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGAL 272
EA F + + G PT F F S + ACA + S+ GK++H LA+ G+ S+ FVG L
Sbjct: 89 EAIRTFCGMRIC-GEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNL 147
Query: 273 VEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDI 332
+MY + + A F+E+ + + DG+ A+ F +M+ ++T D
Sbjct: 148 EDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQ 207
Query: 333 YTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKR 392
+ + L AC +L + G+ VH+ ++ G++SD+ +G AL DMY+K G ++ A +
Sbjct: 208 HVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGI 267
Query: 393 IS-TPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKT 451
S ++VS ++ Y ++G++ F + G P+ +F S + AC + +++
Sbjct: 268 DSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQ 327
Query: 452 GSEFFD--LMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
G++ + +D P + + +VD+ + G L +A + +I P + W +L+
Sbjct: 328 GTQLHAQVMKINFDEDPFVS--SILVDMYGKCGLLEQAIQAFDEIG-DPTEIAWNSLVSV 384
Query: 510 CVSHG 514
HG
Sbjct: 385 FGQHG 389
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 95/200 (47%), Gaps = 1/200 (0%)
Query: 331 DIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAY 390
D + ++ + + RGKQ+HA I GY + LV+MY+KCG L HA +
Sbjct: 4 DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLF 63
Query: 391 KRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIK 450
+ +LVS AM++ + + E I F + G P +F SA+ AC GSI+
Sbjct: 64 DTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIE 123
Query: 451 TGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGC 510
G + L + + L + + D+ S+ G + +A + +++P D V W A++ G
Sbjct: 124 MGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMP-CKDEVSWTAMIDGY 182
Query: 511 VSHGNLEFGQIAADRLIELE 530
G E +A ++I+ E
Sbjct: 183 SKIGEFEEALLAFKKMIDEE 202
>gi|357521295|ref|XP_003630936.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524958|gb|AET05412.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 959
Score = 348 bits (893), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 196/598 (32%), Positives = 310/598 (51%), Gaps = 73/598 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG+L DA+K+F +MP+ D V
Sbjct: 322 MYSKCGNLFDARKIFDIMPQTD------------------------------------TV 345
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+ +I G+ QNG+ +EA+ + M G++ ++ T +S LP+ + L KE H YI
Sbjct: 346 TWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSGSLKYCKEVHSYI 405
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R+G + ++ + LVD+Y + GD+ A K F + ++ + C
Sbjct: 406 VRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVAVCT---------------- 449
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+MISGYV N L EA ++FR L+++G+ P T SVL A
Sbjct: 450 -------------------AMISGYVLNGLNVEALNLFR-WLIQEGMVPNCLTMASVLPA 489
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA + SL+ GKE+H + GL++ VG ++ MY + L A F + +++
Sbjct: 490 CAALASLKLGKELHCDILKKGLENVCQVGSSITYMYAKSGRLDLAYQFFRRMPVKDSVCW 549
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
+ F N A+ LF +M + D ++ LSAC++ + GK++H + +R
Sbjct: 550 NLMIVSFSQNGKPELAIDLFRQMGTSGTKFDSVSLSATLSACANYPALYYGKELHCFVVR 609
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
+ SD + + L+DMY+KCG L AR + + + VS N+++ AY HG +E +
Sbjct: 610 NSFISDTFVASTLIDMYSKCGKLALARSVFDMMDWKNEVSWNSIIAAYGNHGRPRECLDL 669
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLS 479
F ++ +G +PDH++FL +SAC HAG + G +F M Y + ++H+ CMVDL
Sbjct: 670 FHEMVEAGIQPDHVTFLVIMSACGHAGLVDEGIYYFRCMTEEYGICARMEHFACMVDLYG 729
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
RAG L EA++ IK +P PD+ WG+LLG C HGN+E ++A+ L+EL+PNN+G YV+
Sbjct: 730 RAGRLHEAFDTIKSMPFTPDAGTWGSLLGACRLHGNVELAKLASKHLVELDPNNSGYYVL 789
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
L+N+ A AG W + + R MK++ + K PG SWI+ H F A+D H +S EIY
Sbjct: 790 LSNVHAGAGEWESVLKVRSLMKEKGVQKIPGYSWIDVNGGTHMFSAADGCHPQSVEIY 847
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 124/514 (24%), Positives = 227/514 (44%), Gaps = 73/514 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y G + DAK +F +P RDC+ WN
Sbjct: 221 LYTDNGYIHDAKYLFDELPVRDCILWN--------------------------------- 247
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
++ G+ +NG A+G M+ ++PN+ + +L CA + G + HG +
Sbjct: 248 ---VMLNGYVKNGDFNSALGTFQEMRNSCVKPNSVSFVCLLSVCATRGIVRAGIQLHGLV 304
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R+GF S+P V N ++ +Y +CG++ A KIF + V+ N +I GY +NG EA
Sbjct: 305 IRSGFESDPTVANTIITMYSKCGNLFDARKIFDIMPQTDTVTWNGLIAGYVQNGFTDEAV 364
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LF M + G++ S TF S L +
Sbjct: 365 ALFKAM------------------------------------VTSGVKLDSITFASFLPS 388
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
SL+ KE+H+ + G+ D ++ ALV++Y + D+ A F + ++ +
Sbjct: 389 VLKSGSLKYCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVAVC 448
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G+ N A+ LF ++ + P+ T+ +L AC++LA+++ GK++H ++
Sbjct: 449 TAMISGYVLNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALASLKLGKELHCDILK 508
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
G ++ +G+++ MYAK G L A ++R+ D V N M+ +++ +G + I
Sbjct: 509 KGLENVCQVGSSITYMYAKSGRLDLAYQFFRRMPVKDSVCWNLMIVSFSQNGKPELAIDL 568
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSR 480
FR++ SG + D +S + LSAC + ++ G E + + ++D+ S+
Sbjct: 569 FRQMGTSGTKFDSVSLSATLSACANYPALYYGKELHCFVVRNSFISDTFVASTLIDMYSK 628
Query: 481 AGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
G+L A + + V W +++ +HG
Sbjct: 629 CGKLALARSVFDMMDWK-NEVSWNSIIAAYGNHG 661
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 119/461 (25%), Positives = 216/461 (46%), Gaps = 39/461 (8%)
Query: 60 VSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
+ W+ +I GF+ G + A+ FRM + P+ T V+ AC L + L K H
Sbjct: 143 LPWNWLIRGFSMLGCFDFALMFFFRMLGSNVAPDKYTFPYVIKACGGLNNVPLCKMVHEL 202
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
GF + F+ + L+ +Y +NG + +A
Sbjct: 203 ARSMGFHMDLFIGSSLIKLYT-------------------------------DNGYIHDA 231
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDG-IEPTSFTFGSVL 238
+ LFD++ R I WN M++GYV N ++ A F++ MR+ ++P S +F +L
Sbjct: 232 KYLFDELP----VRDCILWNVMLNGYVKNGDFNSALGTFQE--MRNSCVKPNSVSFVCLL 285
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
CA +R G ++H L I G +SD V ++ MY + +L A+ FD + + +
Sbjct: 286 SVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDARKIFDIMPQTDTV 345
Query: 299 LGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYA 358
G+ N +T A+ LF M++ + D T L + +++ K+VH+Y
Sbjct: 346 TWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSGSLKYCKEVHSYI 405
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGI 418
+R G DV++ +ALVD+Y K G ++ A +++ + D+ AM++ Y ++G E +
Sbjct: 406 VRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAMISGYVLNGLNVEAL 465
Query: 419 AHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLL 478
FR ++ G P+ ++ S L AC S+K G E + ++ + + + +
Sbjct: 466 NLFRWLIQEGMVPNCLTMASVLPACAALASLKLGKELHCDILKKGLENVCQVGSSITYMY 525
Query: 479 SRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFG 519
+++G L AY+F +++P+ DSV W ++ +G E
Sbjct: 526 AKSGRLDLAYQFFRRMPVK-DSVCWNLMIVSFSQNGKPELA 565
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 120/266 (45%), Gaps = 5/266 (1%)
Query: 251 KEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPN 310
++IHA + G+ +G ++ MY + F ++ +L GF
Sbjct: 96 RQIHAKVLVCGMNGSLTLGSRMLGMYVLCRSFKDVGNLFCRLQLCYSLPWNWLIRGFSML 155
Query: 311 VYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIG 370
A+ F ML ++ PD YT ++ AC L + K VH A G+ D+ IG
Sbjct: 156 GCFDFALMFFFRMLGSNVAPDKYTFPYVIKACGGLNNVPLCKMVHELARSMGFHMDLFIG 215
Query: 371 TALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFR 430
++L+ +Y G + A+ + + D + N ML Y +G + F+ + S +
Sbjct: 216 SSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNSCVK 275
Query: 431 PDHISFLSALSACVHAGSIKTGSEFFDLM--AYYDVKPSLKHYTCMVDLLSRAGELGEAY 488
P+ +SF+ LS C G ++ G + L+ + ++ P++ + ++ + S+ G L +A
Sbjct: 276 PNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVAN--TIITMYSKCGNLFDAR 333
Query: 489 EFIKKIPMAPDSVMWGALLGGCVSHG 514
+ +P D+V W L+ G V +G
Sbjct: 334 KIFDIMPQT-DTVTWNGLIAGYVQNG 358
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 90/202 (44%), Gaps = 4/202 (1%)
Query: 349 ERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAY 408
++ +Q+HA + CG + + +G+ ++ MY C S K + R+ + N ++ +
Sbjct: 93 QQVRQIHAKVLVCGMNGSLTLGSRMLGMYVLCRSFKDVGNLFCRLQLCYSLPWNWLIRGF 152
Query: 409 AMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSL 468
+M G + F R+L S PD +F + AC ++ +L L
Sbjct: 153 SMLGCFDFALMFFFRMLGSNVAPDKYTFPYVIKACGGLNNVPLCKMVHELARSMGFHMDL 212
Query: 469 KHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG--NLEFGQIAADRL 526
+ ++ L + G + +A ++P+ D ++W +L G V +G N G R
Sbjct: 213 FIGSSLIKLYTDNGYIHDAKYLFDELPVR-DCILWNVMLNGYVKNGDFNSALGTFQEMRN 271
Query: 527 IELEPNNTGNYVMLANLFAYAG 548
++PN+ ++V L ++ A G
Sbjct: 272 SCVKPNSV-SFVCLLSVCATRG 292
>gi|359483031|ref|XP_002271968.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02750
[Vitis vinifera]
Length = 788
Score = 348 bits (893), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 217/692 (31%), Positives = 352/692 (50%), Gaps = 117/692 (16%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
+ K G + DA+++F MP+R+ VSWNS++ A N V EA + ++M + D L S
Sbjct: 56 FAKNGRISDARQLFDGMPQRNIVSWNSMIAAYLHNDRVEEARQLFDKMPTRD-----LYS 110
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEP-----------------NARTLSSVLPA- 103
W+ +I +T+NG +A LF + P AR L +PA
Sbjct: 111 WTLMITCYTRNGELAKARN-LFNLLPYKWNPVCCNAMVAGYAKNRQFDEARRLFDAMPAK 169
Query: 104 -----------CARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIF 152
R ++ LG +F + +S +V+G V+V GD+ S+ + F
Sbjct: 170 DLVSWNSMLTGYTRNGEMRLGLQFFEEMAERDVVSWNLMVDGFVEV----GDLNSSWEFF 225
Query: 153 SKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYD 212
K N VS T++ G+ G +AEAR LFDQM R +++WN+MI+ YV N D
Sbjct: 226 EKIPNPNTVSWVTMLCGFARFGKIAEARRLFDQMP----IRNVVAWNAMIAAYVQNCHVD 281
Query: 213 EAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGAL 272
EA S+F ++ ++ I T+ G V M L + +++ + + T A+
Sbjct: 282 EAISLFMEMPEKNSISWTTVINGYV-----RMGKLDEARQLLNQMPYRNVAAQT----AM 332
Query: 273 VEMYCRYQDLVAAQMAFDEIENIENLL------------GKMKE------DGFEPNVYTW 314
+ Y + + + A+ F++I +I +++ G+M E + ++ +W
Sbjct: 333 ISGYVQNKRMDDARQIFNQI-SIRDVVCWNTMIAGYSQCGRMDEALHLFKQMVKKDIVSW 391
Query: 315 NAM--------------QLFSEMLSLDLT------------------------------- 329
N M ++F EM ++
Sbjct: 392 NTMVASYAQVGQMDAAIKIFEEMKEKNIVSWNSLISGLTQNGSYLDALKSFMLMGHEGQK 451
Query: 330 PDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLA 389
PD T LS+C+ LA ++ GKQ+H ++ GY +D+ + AL+ MYAKCGS+ A L
Sbjct: 452 PDQSTFACGLSSCAHLAALQVGKQLHQLVMKSGYATDLFVSNALITMYAKCGSISSAELL 511
Query: 390 YKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSI 449
+K I D+VS N+++ AYA++G+G+E + F ++ G PD ++F+ LSAC H G I
Sbjct: 512 FKDIDHFDVVSWNSLIAAYALNGNGREALKLFHKMEVEGVAPDEVTFVGILSACSHVGLI 571
Query: 450 KTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLG 508
G + F M Y+++P +HY CMVDLL RAG L EA++ ++ + + ++ +WGALLG
Sbjct: 572 DQGLKLFKCMVQAYNIEPLAEHYACMVDLLGRAGRLEEAFQLVRGMKINANAGIWGALLG 631
Query: 509 GCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKS 568
C HGNLE + AA++L+E EP+ T NYV+L+N+ A AGRW ++AR R+ MK++ K
Sbjct: 632 ACRIHGNLELAKFAAEKLLEFEPHKTSNYVLLSNMQAEAGRWDEVARVRRLMKEKGAEKQ 691
Query: 569 PGCSWIEDRDEIHKFRASDRSHDRSEEIYTII 600
PG SWIE ++ +H F + D +H R+ E+ I+
Sbjct: 692 PGWSWIELQNRVHAFLSEDPAHPRAVELCHIL 723
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 167/384 (43%), Gaps = 43/384 (11%)
Query: 141 RCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNS 200
+ G + A+K+F + KN V+ N++I + +NG +++AR+LFD M QR I+SWNS
Sbjct: 27 KSGQIDEAIKVFQHMTHKNTVTHNSMISAFAKNGRISDARQLFDGMP----QRNIVSWNS 82
Query: 201 MISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMN-SLRKGKEIHALAIA 259
MI+ Y+ N +EA +F + RD T ++I C N L K + + L
Sbjct: 83 MIAAYLHNDRVEEARQLFDKMPTRDLYSWT------LMITCYTRNGELAKARNLFNL--- 133
Query: 260 LGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQL 319
L + + A+V Y + + A+ FD + + + G+ N +Q
Sbjct: 134 LPYKWNPVCCNAMVAGYAKNRQFDEARRLFDAMPAKDLVSWNSMLTGYTRNGEMRLGLQF 193
Query: 320 FSEM-----LSLDLTPDIYT-VGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTAL 373
F EM +S +L D + VG + S+ + V + CG
Sbjct: 194 FEEMAERDVVSWNLMVDGFVEVGDLNSSWEFFEKIPNPNTVSWVTMLCG----------- 242
Query: 374 VDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDH 433
+A+ G + AR + ++ ++V+ NAM+ AY + H E I+ F + +
Sbjct: 243 ---FARFGKIAEARRLFDQMPIRNVVAWNAMIAAYVQNCHVDEAISLFMEMP----EKNS 295
Query: 434 ISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKK 493
IS+ + ++ V G + + + M Y +V T M+ + + +A + +
Sbjct: 296 ISWTTVINGYVRMGKLDEARQLLNQMPYRNVAAQ----TAMISGYVQNKRMDDARQIFNQ 351
Query: 494 IPMAPDSVMWGALLGGCVSHGNLE 517
I + D V W ++ G G ++
Sbjct: 352 ISIR-DVVCWNTMIAGYSQCGRMD 374
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 112/512 (21%), Positives = 178/512 (34%), Gaps = 145/512 (28%)
Query: 128 NPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQME 187
N N ++ + + G + A ++F +N VS N++I Y N V EAR+LFD+M
Sbjct: 45 NTVTHNSMISAFAKNGRISDARQLFDGMPQRNIVSWNSMIAAYLHNDRVEEARQLFDKMP 104
Query: 188 HLGVQRGIISW--------------------------------NSMISGYVDNSLYDEAF 215
R + SW N+M++GY N +DEA
Sbjct: 105 ----TRDLYSWTLMITCYTRNGELAKARNLFNLLPYKWNPVCCNAMVAGYAKNRQFDEAR 160
Query: 216 SMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQ-------SDTFV 268
+F + +D + S G R G+ + LGLQ D
Sbjct: 161 RLFDAMPAKDLVSWNSMLTGYT----------RNGE------MRLGLQFFEEMAERDVVS 204
Query: 269 GGALVEMYCRYQDLVAAQMAFDEIENIENL-----------LGKMKEDG--FEP----NV 311
+V+ + DL ++ F++I N + GK+ E F+ NV
Sbjct: 205 WNLMVDGFVEVGDLNSSWEFFEKIPNPNTVSWVTMLCGFARFGKIAEARRLFDQMPIRNV 264
Query: 312 YTWNAM--------------QLFSEML---SLDLTPDI---YTVGIILSACSSLATMERG 351
WNAM LF EM S+ T I +G + A L M
Sbjct: 265 VAWNAMIAAYVQNCHVDEAISLFMEMPEKNSISWTTVINGYVRMGKLDEARQLLNQMPYR 324
Query: 352 KQVHAYAIRCGYDS-----------------DVHIGTALVDMYAKCGSLKHARLAYKRIS 394
A+ GY DV ++ Y++CG + A +K++
Sbjct: 325 NVAAQTAMISGYVQNKRMDDARQIFNQISIRDVVCWNTMIAGYSQCGRMDEALHLFKQMV 384
Query: 395 TPDLVSQNAMLTAYAMHGHGKEGIAHFRRI----------LASGF--------------- 429
D+VS N M+ +YA G I F + L SG
Sbjct: 385 KKDIVSWNTMVASYAQVGQMDAAIKIFEEMKEKNIVSWNSLISGLTQNGSYLDALKSFML 444
Query: 430 ------RPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGE 483
+PD +F LS+C H +++ G + L+ L ++ + ++ G
Sbjct: 445 MGHEGQKPDQSTFACGLSSCAHLAALQVGKQLHQLVMKSGYATDLFVSNALITMYAKCGS 504
Query: 484 LGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
+ A K I D V W +L+ +GN
Sbjct: 505 ISSAELLFKDIDHF-DVVSWNSLIAAYALNGN 535
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 61/112 (54%), Gaps = 4/112 (3%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGS+ A+ +FK + D VSWNS++ A A NG EAL+ +M ++ P+ V
Sbjct: 498 MYAKCGSISSAELLFKDIDHFDVVSWNSLIAAYALNGNGREALKLFHKM-EVEGVAPDEV 556
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFR--MQAEGLEPNARTLSSVLPACARLQKL 110
++ ++ + G ++ + LF+ +QA +EP A + ++ R +L
Sbjct: 557 TFVGILSACSHVGLIDQGLK-LFKCMVQAYNIEPLAEHYACMVDLLGRAGRL 607
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 74/158 (46%), Gaps = 12/158 (7%)
Query: 374 VDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDH 433
+ K G + A ++ ++ + V+ N+M++A+A +G I+ R++ + +
Sbjct: 22 ITQLGKSGQIDEAIKVFQHMTHKNTVTHNSMISAFAKNGR----ISDARQLFDGMPQRNI 77
Query: 434 ISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKK 493
+S+ S ++A +H ++ + FD M D L +T M+ +R GEL +A
Sbjct: 78 VSWNSMIAAYLHNDRVEEARQLFDKMPTRD----LYSWTLMITCYTRNGELAKARNLFNL 133
Query: 494 IPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEP 531
+P + V A++ G N +F + A RL + P
Sbjct: 134 LPYKWNPVCCNAMVAGYAK--NRQFDE--ARRLFDAMP 167
>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 348 bits (893), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 194/548 (35%), Positives = 295/548 (53%), Gaps = 37/548 (6%)
Query: 55 ETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGK 114
+ PN+ W+ +I G N ++AI M++EG PN T VL ACARL L LG
Sbjct: 73 KQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKACARLLDLQLGV 132
Query: 115 EFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
+ H + + GF + FV LV +Y +CG + A K+F KN VS II GY
Sbjct: 133 KIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVVSWTAIISGY---- 188
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTF 234
+GV + + EA MFR LL + + P SFT
Sbjct: 189 --------------IGVGK-----------------FREAIDMFRRLLEMN-LAPDSFTI 216
Query: 235 GSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIEN 294
VL AC + L G+ IH + +G+ + FVG +LV+MY + ++ A+ FD +
Sbjct: 217 VRVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPE 276
Query: 295 IENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV 354
+ + G+ N A+ LF +M ++ PD YTV +LSAC+ L +E G+ V
Sbjct: 277 KDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWV 336
Query: 355 HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHG 414
R + + +GTAL+D+YAKCGS+ A +K + D V NA+++ AM+G+
Sbjct: 337 SGLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYV 396
Query: 415 KEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTC 473
K F ++ G +PD +F+ L C HAG + G +F+ M ++ + PS++HY C
Sbjct: 397 KISFGLFGQVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGC 456
Query: 474 MVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNN 533
MVDLL RAG L EA++ I+ +PM ++++WGALLG C H + + ++A +LIELEP N
Sbjct: 457 MVDLLGRAGLLDEAHQLIRNMPMEANAIVWGALLGACRIHRDTQLAELALKQLIELEPWN 516
Query: 534 TGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRS 593
+GNYV+L+N+++ +W + A+ R M ++R+ K PGCSWIE +H+F D+ H S
Sbjct: 517 SGNYVLLSNIYSANLKWDEAAKVRLSMNEKRIQKPPGCSWIEVDGIVHEFLVGDKYHPLS 576
Query: 594 EEIYTIID 601
E+IY +D
Sbjct: 577 EKIYAKLD 584
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 111/348 (31%), Positives = 180/348 (51%), Gaps = 11/348 (3%)
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
R LF Q++ Q I WN+MI G V N +D+A F L+ +G P +FTF VL
Sbjct: 65 TRFLFHQIK----QPNIFLWNTMIRGLVSNDCFDDAIE-FYGLMRSEGFLPNNFTFPFVL 119
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
ACA + L+ G +IH L + G D FV +LV +Y + L A FD+I + +
Sbjct: 120 KACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVV 179
Query: 299 LGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYA 358
G+ A+ +F +L ++L PD +T+ +LSAC+ L + G+ +H
Sbjct: 180 SWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCI 239
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGI 418
+ G +V +GT+LVDMYAKCG+++ AR + + D+VS AM+ YA++G KE I
Sbjct: 240 MEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAI 299
Query: 419 AHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLL 478
F ++ +PD + + LSAC G+++ G L+ + + T ++DL
Sbjct: 300 DLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLGTALIDLY 359
Query: 479 SRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE-----FGQI 521
++ G + A+E K + D V+W A++ G +G ++ FGQ+
Sbjct: 360 AKCGSMSRAWEVFKGMK-EKDRVVWNAIISGLAMNGYVKISFGLFGQV 406
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 138/296 (46%), Gaps = 39/296 (13%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG+++ A+ VF MPE+D +V
Sbjct: 257 MYAKCGNMEKARSVFDGMPEKD------------------------------------IV 280
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW A+I G+ NG +EAI + +MQ E ++P+ T+ VL ACARL L LG+ G +
Sbjct: 281 SWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLV 340
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
RN F+ NP + L+D+Y +CG M A ++F K+ V N II G NG V +
Sbjct: 341 DRNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISF 400
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LF Q+E LG++ ++ ++ G L DE F + + P+ +G ++
Sbjct: 401 GLFGQVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDL 460
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
L E H L + ++++ V GAL+ ++D A++A ++ +E
Sbjct: 461 LGRAGLL---DEAHQLIRNMPMEANAIVWGALLGACRIHRDTQLAELALKQLIELE 513
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 102/414 (24%), Positives = 168/414 (40%), Gaps = 76/414 (18%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KCG L+DA KVF +P+++ VSW ++++
Sbjct: 156 LYAKCGYLEDAHKVFDDIPDKNVVSWTAIIS----------------------------- 186
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
G+ G EAI M R+ L P++ T+ VL AC +L L+ G+ H I
Sbjct: 187 -------GYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCI 239
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
G + N FV LVD+Y +CG+M A +F K+ VS +I GY NG EA
Sbjct: 240 MEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAI 299
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+LF QM+ R+ ++P +T VL A
Sbjct: 300 DLFLQMQ------------------------------------RENVKPDCYTVVGVLSA 323
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA + +L G+ + L + +G AL+++Y + + A F ++ + ++
Sbjct: 324 CARLGALELGEWVSGLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVW 383
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVH--AYA 358
G N Y + LF ++ L + PD T +L C+ ++ G++ Y
Sbjct: 384 NAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYR 443
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST-PDLVSQNAMLTAYAMH 411
S H G +VD+ + G L A + + + + A+L A +H
Sbjct: 444 FFSLTPSIEHYG-CMVDLLGRAGLLDEAHQLIRNMPMEANAIVWGALLGACRIH 496
>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 877
Score = 348 bits (893), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 197/599 (32%), Positives = 330/599 (55%), Gaps = 46/599 (7%)
Query: 8 LDDAKKVFKMMP----ERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWS 63
L+ +KV M+ ++D + N++V + G + A ++ D +VSW+
Sbjct: 218 LEAGRKVHAMVIRTGYDKDVFTANALVDMYSKLGDIRMAAVVFGKVPETD-----VVSWN 272
Query: 64 AVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRN 123
A I G +G+D+ A+ +L +M++ GL PN TLSS+L ACA +LG++ HG++ +
Sbjct: 273 AFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKA 332
Query: 124 GFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELF 183
S+ ++ GLVD+Y + +G + +A+++F
Sbjct: 333 NADSDNYIAFGLVDMYAK-------------------------------HGLLDDAKKVF 361
Query: 184 DQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACAD 243
D + QR ++ WN++ISG + + EA S+F + ++G + T +VL + A
Sbjct: 362 DWIP----QRDLVLWNALISGCSHGAQHAEALSLFCRM-RKEGFDVNRTTLAAVLKSTAS 416
Query: 244 MNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMK 303
+ ++ +++HALA LG SD+ V L++ Y + L A F++ + + +
Sbjct: 417 LEAISDTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSM 476
Query: 304 EDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGY 363
+ +A++LF EML L PD + + +L+AC+SL+ E+GKQVHA+ I+ +
Sbjct: 477 ITALSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQF 536
Query: 364 DSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRR 423
SDV G ALV YAKCGS++ A LA+ + +VS +AM+ A HGHGK + F R
Sbjct: 537 MSDVFAGNALVYTYAKCGSIEDADLAFSGLPEKGVVSWSAMIGGLAQHGHGKRALDVFHR 596
Query: 424 ILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLLSRAG 482
++ P+HI+ S L AC HAG + +F+ M + ++ + +HY CM+DLL RAG
Sbjct: 597 MVDEHISPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIERTEEHYACMIDLLGRAG 656
Query: 483 ELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLAN 542
+L +A E + +P ++ +WGALL H + E G++AA++L LEP +G +V+LAN
Sbjct: 657 KLDDAMELVNSMPFQTNAAVWGALLAASRVHRDPELGRLAAEKLFILEPEKSGTHVLLAN 716
Query: 543 LFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
+A AG W D+A+ R+ MKD ++ K P SW+E +D++H F D+SH R+ +IY +D
Sbjct: 717 TYASAGMWDDVAKVRKLMKDSKVKKEPAMSWVELKDKVHTFIVGDKSHPRARDIYAKLD 775
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 107/351 (30%), Positives = 171/351 (48%), Gaps = 39/351 (11%)
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRD-GIEPTSFTFGSV 237
AR +FD++ +SW+S+++ Y +N++ +A FR MR + F V
Sbjct: 56 ARRVFDEIP----DPCHVSWSSLVTAYSNNAMPRDALGAFRS--MRSCSVRCNEFVLPVV 109
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
L D G ++HALA+A GL D FV ALV MY + + A+M FDE
Sbjct: 110 LKCAPDAGF---GTQLHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEA----- 161
Query: 298 LLGKMKEDGFEPNVYTWN--------------AMQLFSEMLSLDLTPDIYTVGIILSACS 343
G E N +WN A+++F EM+ + P+ + +++AC+
Sbjct: 162 --------GCERNTVSWNGLMSAYVKNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACT 213
Query: 344 SLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNA 403
+E G++VHA IR GYD DV ALVDMY+K G ++ A + + ++ D+VS NA
Sbjct: 214 GSRDLEAGRKVHAMVIRTGYDKDVFTANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNA 273
Query: 404 MLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYD 463
++ +HGH + + ++ +SG P+ + S L AC +G+ G + M +
Sbjct: 274 FISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKAN 333
Query: 464 VKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
+VD+ ++ G L +A + IP D V+W AL+ GC SHG
Sbjct: 334 ADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQR-DLVLWNALISGC-SHG 382
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 130/512 (25%), Positives = 215/512 (41%), Gaps = 80/512 (15%)
Query: 57 PNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEF 116
P VSWS+++ ++ N +A+G M++ + N L VL CA G +
Sbjct: 66 PCHVSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLK-CA--PDAGFGTQL 122
Query: 117 HGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNV 176
H G + FV N LV +Y G+ G V
Sbjct: 123 HALAMATGLGGDIFVANALVAMYG----------------------------GF---GFV 151
Query: 177 AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGS 236
EAR +FD+ G +R +SWN ++S YV N A +F +++ G++P F F
Sbjct: 152 DEARMVFDEA---GCERNTVSWNGLMSAYVKNDRCSHAVKVFGEMVW-GGVQPNEFGFSC 207
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
V+ AC L G+++HA+ I G D F ALV+MY + D+ A + F ++ +
Sbjct: 208 VVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTANALVDMYSKLGDIRMAAVVFGKVPETD 267
Query: 297 NLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHA 356
+ G + + +A++L +M S L P+++T+ IL AC+ G+Q+H
Sbjct: 268 VVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHG 327
Query: 357 YAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKE 416
+ ++ DSD +I LVDMYAK G L A+ + I DLV NA+++ + E
Sbjct: 328 FMVKANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQRDLVLWNALISGCSHGAQHAE 387
Query: 417 GIAHFRRILASGFRPDHISFLSALSAC-----------VHAGSIKTG------------- 452
++ F R+ GF + + + L + VHA + K G
Sbjct: 388 ALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDTRQVHALAEKLGFLSDSHVVNGLID 447
Query: 453 -----------SEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKI---PMAP 498
F+ YD+ +T M+ LS+ +A + ++ + P
Sbjct: 448 SYWKCDCLNYAYRVFEKHGSYDIIA----FTSMITALSQCDHGEDAIKLFMEMLRKGLDP 503
Query: 499 DSVMWGALLGGCVSHGNLEFGQIAADRLIELE 530
D + +LL C S E G+ LI+ +
Sbjct: 504 DPFVLSSLLNACASLSAYEQGKQVHAHLIKRQ 535
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 154/353 (43%), Gaps = 72/353 (20%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G LDDAKKVF +P+RD V WN++++ C
Sbjct: 347 MYAKHGLLDDAKKVFDWIPQRDLVLWNALISGC--------------------------- 379
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+ EA+ + RM+ EG + N TL++VL + A L+ +S ++ H
Sbjct: 380 ---------SHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDTRQVHALA 430
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ GF+S+ VVNGL+D Y +C + A ++F K +
Sbjct: 431 EKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYD--------------------- 469
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
II++ SMI+ ++A +F ++L R G++P F S+L A
Sbjct: 470 --------------IIAFTSMITALSQCDHGEDAIKLFMEML-RKGLDPDPFVLSSLLNA 514
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA +++ +GK++HA I SD F G ALV Y + + A +AF + +
Sbjct: 515 CASLSAYEQGKQVHAHLIKRQFMSDVFAGNALVYTYAKCGSIEDADLAFSGLPEKGVVSW 574
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ 353
G + + A+ +F M+ ++P+ T+ +L AC+ ++ K+
Sbjct: 575 SAMIGGLAQHGHGKRALDVFHRMVDEHISPNHITMTSVLCACNHAGLVDEAKR 627
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 126/284 (44%), Gaps = 7/284 (2%)
Query: 233 TFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI 292
T G +L A SL +G IHA + GL + L+ Y + + +A+ FDEI
Sbjct: 6 TIGPLLTRYAATQSLLQGAHIHAHLLKSGLFA--VFRNHLLSFYSKCRLPGSARRVFDEI 63
Query: 293 ENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGK 352
+ ++ + N +A+ F M S + + + + ++L C+ A G
Sbjct: 64 PDPCHVSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLK-CAPDAGF--GT 120
Query: 353 QVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTP-DLVSQNAMLTAYAMH 411
Q+HA A+ G D+ + ALV MY G + AR+ + + VS N +++AY +
Sbjct: 121 QLHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKN 180
Query: 412 GHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHY 471
+ F ++ G +P+ F ++AC + ++ G + ++ +
Sbjct: 181 DRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTA 240
Query: 472 TCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
+VD+ S+ G++ A K+P D V W A + GCV HG+
Sbjct: 241 NALVDMYSKLGDIRMAAVVFGKVP-ETDVVSWNAFISGCVLHGH 283
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 86/207 (41%), Gaps = 13/207 (6%)
Query: 334 TVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRI 393
T+G +L+ ++ ++ +G +HA+ ++ G + L+ Y+KC AR + I
Sbjct: 6 TIGPLLTRYAATQSLLQGAHIHAHLLKSGLFAVFR--NHLLSFYSKCRLPGSARRVFDEI 63
Query: 394 STPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGS 453
P VS ++++TAY+ + ++ + FR + + R + L AG G+
Sbjct: 64 PDPCHVSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLKCAPDAG---FGT 120
Query: 454 EFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCV-- 511
+ L + + +V + G + EA + ++V W L+ V
Sbjct: 121 QLHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKN 180
Query: 512 ---SHGNLEFGQIAADRLIELEPNNTG 535
SH FG++ ++PN G
Sbjct: 181 DRCSHAVKVFGEMVWG---GVQPNEFG 204
>gi|297743088|emb|CBI35955.3| unnamed protein product [Vitis vinifera]
Length = 708
Score = 348 bits (893), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 193/612 (31%), Positives = 326/612 (53%), Gaps = 43/612 (7%)
Query: 29 VVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAE 88
VV+ A GLV +A E +S ++ + NL+ W++++ +GY EEA+ + RM+
Sbjct: 72 VVSVYAGFGLVSDAQRVFE-VSPIECFS-NLLLWNSILRANVAHGYCEEALEIYCRMRKL 129
Query: 89 GLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSA 148
G+ + T V+ ACA + L + HG++ GF N V N L+ +Y + G M A
Sbjct: 130 GVSADGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDA 189
Query: 149 LKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDN 208
K+F + ++++ VS NT++ GY N + A E+F M G++ +++W S++S +
Sbjct: 190 RKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARC 249
Query: 209 SLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFV 268
+ E +F + MR GI T+ VL D+ + +GK IH + G ++ FV
Sbjct: 250 GQHVETMELFGRMRMR-GIGATAEALAVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLFV 308
Query: 269 GGALVEMYCRYQDLVAAQMAFDEI----------------------ENIENLLGKMKEDG 306
+L+ +Y ++ ++ AA++ F EI E L K D
Sbjct: 309 KNSLICLYGKHGNVNAARILFLEIKTKNIVSWNALISSYADLGWCDEAFAIFLQLEKTDE 368
Query: 307 F---EPNVYTWNA--------------MQLFSEMLSLDLTPDIYTVGIILSACSSLATME 349
+ PNV +W+A ++LF M + + T+ +LS C+ LA +
Sbjct: 369 YPMVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLAKVKANSVTIASVLSVCAELAALH 428
Query: 350 RGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYA 409
G+++H + +R D ++ +G L++MY K GS K L +++I DL+S N M+ Y
Sbjct: 429 LGREIHGHVVRSLMDGNILVGNGLINMYTKSGSFKEGNLVFEKIENKDLISWNTMVAGYG 488
Query: 410 MHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFD-LMAYYDVKPSL 468
+HG G+ I F +++ GF PD ++F++ LSAC HAG + G E FD ++ + V+P +
Sbjct: 489 IHGLGENAIRTFDQMIKDGFEPDGVTFVAVLSACSHAGLVAEGRELFDKMIKEFRVEPQM 548
Query: 469 KHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIE 528
+HY CMVDLL RAG L EA + +K +P+ P++ +WGALL C H N E + A ++
Sbjct: 549 EHYACMVDLLGRAGLLQEASKVVKSMPVEPNACVWGALLNSCRMHKNTEVAEETASQIFN 608
Query: 529 LEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDR 588
L G+Y++L+N++A +GRW D A+ R K + + K+PG SWI+ + +++ F A +
Sbjct: 609 LNSEIAGSYMLLSNIYAASGRWEDSAKVRISAKTKGLKKTPGQSWIQVKKKVYMFSAGNT 668
Query: 589 SHDRSEEIYTII 600
H EE+Y I+
Sbjct: 669 QHAELEEVYRIL 680
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 125/417 (29%), Positives = 206/417 (49%), Gaps = 8/417 (1%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGK G +DDA+KVF+ M R CVSWN++V+ A N A E M S E PNLV
Sbjct: 179 MYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLE-PNLV 237
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W++++ + G E + + RM+ G+ A L+ VL L GK HGY+
Sbjct: 238 TWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVVLSVSVDLAAFDEGKVIHGYV 297
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ GF + FV N L+ +Y + G++ +A +F + KN VS N +I Y + G EA
Sbjct: 298 VKGGFENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSWNALISSYADLGWCDEAF 357
Query: 181 ELFDQMEHLG----VQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGS 236
+F Q+E V+ ++SW+++I G+ +EA +FR + + ++ S T S
Sbjct: 358 AIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLAK-VKANSVTIAS 416
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
VL CA++ +L G+EIH + + + VG L+ MY + + F++IEN +
Sbjct: 417 VLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGLINMYTKSGSFKEGNLVFEKIENKD 476
Query: 297 NLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHA 356
+ G+ + NA++ F +M+ PD T +LSACS + G+++
Sbjct: 477 LISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVAVLSACSHAGLVAEGRELFD 536
Query: 357 YAIR-CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST-PDLVSQNAMLTAYAMH 411
I+ + + +VD+ + G L+ A K + P+ A+L + MH
Sbjct: 537 KMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKVVKSMPVEPNACVWGALLNSCRMH 593
>gi|449497733|ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g13650-like [Cucumis sativus]
Length = 1037
Score = 348 bits (892), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 195/630 (30%), Positives = 338/630 (53%), Gaps = 71/630 (11%)
Query: 6 GSLDDAKKVFKMMP----ERDCVSWNSVVTACAANGLVLEALE----------------- 44
G D A ++F M + DC++ S+++ACA+ G + + ++
Sbjct: 341 GFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILE 400
Query: 45 ---------CLERMSS----LDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLE 91
C + ++ L ET N+V W+ ++ + Q ++ + +MQ EG+
Sbjct: 401 GSLLDLYSKCADVETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMI 460
Query: 92 PNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKI 151
PN T S+L C L L LG++ H ++ + GF N +V + L+D+Y + G + AL+I
Sbjct: 461 PNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRI 520
Query: 152 FSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLY 211
+ + ++SW +MI+GYV + ++
Sbjct: 521 LRRLP-----------------------------------EDDVVSWTAMIAGYVQHDMF 545
Query: 212 DEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGA 271
EA +F ++ R GI+ + F S + ACA + +LR+G++IHA + A G +D + A
Sbjct: 546 SEALQLFEEMEYR-GIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNA 604
Query: 272 LVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPD 331
L+ +Y R + A +AF++I + N+ G + Y A+Q+F ML + +
Sbjct: 605 LISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVN 664
Query: 332 IYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYK 391
++T G +SA +SLA +++G+Q+H+ ++ GYDS+ + +L+ +YAK GS+ A +
Sbjct: 665 MFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFN 724
Query: 392 RISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKT 451
+S +++S NAM+T Y+ HG G E + F + G P+H++F+ LSAC H G +K
Sbjct: 725 DMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKE 784
Query: 452 GSEFFDLM-AYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGC 510
G ++F+ M +D+ P +HY C+VDLL RAG+L A E+IK++P+ D+++W LL C
Sbjct: 785 GLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLSAC 844
Query: 511 VSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPG 570
V H N+E G+ AA L+ELEP ++ YV+++N++A + +W +R+ MKD + K PG
Sbjct: 845 VIHKNIEIGERAAHHLLELEPEDSATYVLISNIYAVSRQWIHRDWSRKLMKDXGVKKEPG 904
Query: 571 CSWIEDRDEIHKFRASDRSHDRSEEIYTII 600
SWIE ++ +H F A D+ H + +IY I
Sbjct: 905 RSWIEVKNAVHAFYAGDKLHPLTNQIYEYI 934
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 143/492 (29%), Positives = 235/492 (47%), Gaps = 49/492 (9%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
++V+W A+I G +QNG +EEAI + M A + P LSSVL A ++Q LG++ H
Sbjct: 225 DIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLH 284
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
+ + GF S +V NGLV +Y R ++SA +IFS + ++ VS N++I G + G
Sbjct: 285 CLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSD 344
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
A ELF +M+ RD ++P T S+
Sbjct: 345 RALELFTKMQ------------------------------------RDCLKPDCITVASL 368
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAF--DEIENI 295
L ACA + +L KG ++H+ AI G+ +D + G+L+++Y + D+ A F E ENI
Sbjct: 369 LSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTETENI 428
Query: 296 ENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVH 355
+ G N+ ++ ++F +M + P+ +T IL C+SL + G+Q+H
Sbjct: 429 VLWNVMLVAYGQLDNLS--DSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIH 486
Query: 356 AYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGK 415
+ I+ G+ +V++ + L+DMYAK G L A +R+ D+VS AM+ Y H
Sbjct: 487 THVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFS 546
Query: 416 EGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMV 475
E + F + G + D+I F SA+SAC +++ G + L ++
Sbjct: 547 EALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALI 606
Query: 476 DLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTG 535
L +R G + EAY +KI +++ W +L+ G G E R++ E
Sbjct: 607 SLYARCGRIQEAYLAFEKIG-DKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAE--- 662
Query: 536 NYVMLANLFAYA 547
N+F Y
Sbjct: 663 -----VNMFTYG 669
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 122/462 (26%), Positives = 222/462 (48%), Gaps = 38/462 (8%)
Query: 53 DNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQ-KLS 111
+N ++ SW+ +I F + + + RM AEG+ PN T + VL AC +
Sbjct: 118 ENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFN 177
Query: 112 LGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYC 171
K+ H GF S+P V N L+D+Y +
Sbjct: 178 YVKQVHSRTFYYGFDSSPLVANLLIDLYSK------------------------------ 207
Query: 172 ENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTS 231
NG + A+++F+ + + I++W +MISG N L +EA +F D+ + I PT
Sbjct: 208 -NGYIESAKKVFNCI----CMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASE-IFPTP 261
Query: 232 FTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDE 291
+ SVL A + G+++H L I G S+T+V LV +Y R + L++A+ F
Sbjct: 262 YVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFST 321
Query: 292 IENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG 351
+ + + + G ++ A++LF++M L PD TV +LSAC+S+ + +G
Sbjct: 322 MNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKG 381
Query: 352 KQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMH 411
Q+H++AI+ G +D+ + +L+D+Y+KC ++ A + T ++V N ML AY
Sbjct: 382 MQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTETENIVLWNVMLVAYGQL 441
Query: 412 GHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHY 471
+ + FR++ G P+ ++ S L C G++ G + + + ++
Sbjct: 442 DNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVC 501
Query: 472 TCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSH 513
+ ++D+ ++ G+L A ++++P D V W A++ G V H
Sbjct: 502 SVLIDMYAKYGQLALALRILRRLP-EDDVVSWTAMIAGYVQH 542
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 112/480 (23%), Positives = 208/480 (43%), Gaps = 62/480 (12%)
Query: 54 NETPNLVSWSAVIGGFTQNGYDEEAIGM----------LFRMQAEGLEPNARTLSSVLPA 103
++T N+V S V G + +D+ + M + M+ G+ N + +L
Sbjct: 9 DKTNNVVRVSGV-GATNSHSFDQTTLHMEQGKSKRIQLMNFMEERGVRSNYQNYLWLLEG 67
Query: 104 CARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSC 163
C L H I+++GF P +++ LVD Y R GD A+K+F
Sbjct: 68 CLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFD---------- 117
Query: 164 NTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLM 223
EN N R + SWN MI +V + F +FR +L
Sbjct: 118 --------ENSN-----------------RSVFSWNKMIHVFVAQKSNFQVFCLFRRMLA 152
Query: 224 RDGIEPTSFTFGSVLIACADMN-SLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDL 282
+GI P +TF VL AC + + K++H+ G S V L+++Y + +
Sbjct: 153 -EGITPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYI 211
Query: 283 VAAQMAFD-----EIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGI 337
+A+ F+ +I ++ + ++G E A+ LF +M + ++ P Y +
Sbjct: 212 ESAKKVFNCICMKDIVTWVAMISGLSQNGLEE-----EAILLFCDMHASEIFPTPYVLSS 266
Query: 338 ILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPD 397
+LSA + + E G+Q+H I+ G+ S+ ++ LV +Y++ L A + +++ D
Sbjct: 267 VLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRD 326
Query: 398 LVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFD 457
VS N++++ G + F ++ +PD I+ S LSAC G++ G +
Sbjct: 327 GVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHS 386
Query: 458 LMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
+ + ++DL S+ ++ A++F + V+W +L V++G L+
Sbjct: 387 HAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTE-TENIVLWNVML---VAYGQLD 442
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 96/428 (22%), Positives = 170/428 (39%), Gaps = 104/428 (24%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G L A ++ + +PE D VSW +++ + + EAL+ E
Sbjct: 507 MYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFE------------- 553
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
M+ G++ + +S + ACA ++ L G++ H
Sbjct: 554 -----------------------EMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQS 590
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
GF ++ + N L+ +Y RCG + A F K KN +S N+++ G ++G EA
Sbjct: 591 YAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEAL 650
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
++F +M +R E FT+GS + A
Sbjct: 651 QVFVRM------------------------------------LRTEAEVNMFTYGSAISA 674
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
A + ++++G++IH++ + G S+ V +L+ +Y + + A F+++
Sbjct: 675 AASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMS------- 727
Query: 301 KMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSSLA 346
E NV +WNAM +LF EM + P+ T +LSACS +
Sbjct: 728 -------ERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIG 780
Query: 347 TMERGKQVHA--YAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTP-DLVSQNA 403
++ G + I H +VD+ + G L A K + P D +
Sbjct: 781 LVKEGLDYFESMFKIHDLVPKSEHY-VCVVDLLGRAGQLDRAMEYIKEMPIPADAMIWRT 839
Query: 404 MLTAYAMH 411
+L+A +H
Sbjct: 840 LLSACVIH 847
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 134/327 (40%), Gaps = 41/327 (12%)
Query: 220 DLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRY 279
+ + G+ + +L C SL + +H G + + +LV+ Y R+
Sbjct: 47 NFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRH 106
Query: 280 QDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQ--------------LFSEMLS 325
D A FDE N +V++WN M LF ML+
Sbjct: 107 GDQHGAVKVFDENSN--------------RSVFSWNKMIHVFVAQKSNFQVFCLFRRMLA 152
Query: 326 LDLTPDIYTVGIILSAC-SSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLK 384
+TP+ YT +L AC KQVH+ G+DS + L+D+Y+K G ++
Sbjct: 153 EGITPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIE 212
Query: 385 HARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACV 444
A+ + I D+V+ AM++ + +G +E I F + AS P S LSA
Sbjct: 213 SAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSAST 272
Query: 445 HAGSIKTGSEFFDLMAYYDVKPSLKHYTC--MVDLLSRAGELGEAYEFIKKIPMAPDSVM 502
+ G + L+ + + Y C +V L SR+ +L A E I + D V
Sbjct: 273 KIQLFELGEQLHCLVIKWGFHS--ETYVCNGLVALYSRSRKLISA-ERIFSTMNSRDGVS 329
Query: 503 WGALLGGCVSHGNLEFGQIAADRLIEL 529
+ +L+ G V G +DR +EL
Sbjct: 330 YNSLISGLVQQG-------FSDRALEL 349
>gi|147834283|emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera]
Length = 814
Score = 348 bits (892), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 186/555 (33%), Positives = 307/555 (55%), Gaps = 39/555 (7%)
Query: 50 SSLDNETPN--LVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARL 107
+ L N PN L S++A+I G+ ++ EA+GM +Q GL + +LS ACA +
Sbjct: 267 NQLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVI 326
Query: 108 QKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTII 167
+ G + HG ++ SN V N ++D+Y +CG ++ A +F +
Sbjct: 327 KGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEM------------ 374
Query: 168 VGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGI 227
V R +SWN++I+ + N ++ S+F +++ G+
Sbjct: 375 -----------------------VSRDAVSWNAIIAAHEQNGNEEKTLSLFV-WMLQSGM 410
Query: 228 EPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQM 287
EP FT+GSVL ACA +L G EIH I + D+FVG AL++MY + + A+
Sbjct: 411 EPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRMGLDSFVGIALIDMYSKCGMMEKAEK 470
Query: 288 AFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLAT 347
D + + GF + A + FS+ML + + PD +T IL C++L T
Sbjct: 471 LHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVT 530
Query: 348 MERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTA 407
+E GKQ+HA I+ SD +I + LVDMY+KCG+++ +L +++ D V+ NAM+
Sbjct: 531 VELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCG 590
Query: 408 YAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFF-DLMAYYDVKP 466
YA HG G+E + F + +P+H +FL+ L AC H G ++ G +F +++ Y + P
Sbjct: 591 YAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDP 650
Query: 467 SLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRL 526
L+HY+C+VD++ R+G++ +A E I+ +P D+V+W LL C HGN+E + AA +
Sbjct: 651 QLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSXCKIHGNVEVAEKAAYSI 710
Query: 527 IELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRAS 586
++LEP ++ YV+L+N++A AG W+++ + R+ M+ + K PGCSWIE + E+H F
Sbjct: 711 LQLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEIKSEVHAFLVG 770
Query: 587 DRSHDRSEEIYTIID 601
D++H RS+EIY +D
Sbjct: 771 DKAHPRSKEIYENLD 785
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 135/537 (25%), Positives = 248/537 (46%), Gaps = 50/537 (9%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC L A KVF MP+RD VSWN+++ A G + A + + M
Sbjct: 86 MYIKCSDLGFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPG--------- 136
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+ V+ F FRM G + T + VL +C+ L+ G + HG
Sbjct: 137 TGCGVVELFD------------FRMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLA 184
Query: 121 TRNGFMSNPFVVNGLVDVYRRC----GDMLSALKIFSKF-------------SIKNEVSC 163
+ GF + + L+D+Y +C D+ L++F + ++K +
Sbjct: 185 VKMGFDCDVVTGSALLDMYAKCCVQNDDLRGGLELFKEMQKAGVGALQLHGHALKTDFGT 244
Query: 164 NTIIVG-----YCENGNVAE-ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSM 217
+ +I Y + N+++ + +LF+ + + +Q S+N++I GY + EA M
Sbjct: 245 DVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQ----SYNAIIVGYARSDKGIEALGM 300
Query: 218 FRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYC 277
FR LL + G+ + ACA + +G ++H L++ QS+ V A+++MY
Sbjct: 301 FR-LLQKSGLGLDEVSLSGAXRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYG 359
Query: 278 RYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGI 337
+ LV A + F+E+ + + + E N + LF ML + PD +T G
Sbjct: 360 KCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGS 419
Query: 338 ILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPD 397
+L AC+ + G ++H I+ D +G AL+DMY+KCG ++ A + R++
Sbjct: 420 VLKACAGWQALNCGMEIHNRIIKSRMGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQT 479
Query: 398 LVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFD 457
+VS NA+++ +++ +E F ++L G PD+ ++ + L C + +++ G +
Sbjct: 480 VVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHA 539
Query: 458 LMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
+ +++ + +VD+ S+ G + + +K P D V W A++ G HG
Sbjct: 540 QIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAP-NRDFVTWNAMVCGYAQHG 595
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 110/426 (25%), Positives = 181/426 (42%), Gaps = 75/426 (17%)
Query: 95 RTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSK 154
+T S + C+ + L GK+ H + F FV N L+ +Y +C D+ A K+F
Sbjct: 43 KTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLGFAFKVFDG 102
Query: 155 FSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEA 214
++ VS N ++ GY G++ A++LFD M G G++ L+D
Sbjct: 103 MPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTGC--GVV------------ELFD-- 146
Query: 215 FSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVE 274
FR + R G TF VL +C+ + G +IH LA+ +G D G AL++
Sbjct: 147 ---FR--MGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLD 201
Query: 275 MY--CRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDI 332
MY C Q+ ++L G ++LF EM
Sbjct: 202 MYAKCCVQN--------------DDLRG---------------GLELFKEMQKAG----- 227
Query: 333 YTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKH-ARLAYK 391
VG + Q+H +A++ + +DV IGTA +DMY KC +L + +
Sbjct: 228 --VGAL--------------QLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFN 271
Query: 392 RISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKT 451
+ +L S NA++ YA G E + FR + SG D +S A AC
Sbjct: 272 SLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLE 331
Query: 452 GSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCV 511
G + L + ++ ++D+ + G L EA +++ ++ D+V W A++
Sbjct: 332 GLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEM-VSRDAVSWNAIIAAHE 390
Query: 512 SHGNLE 517
+GN E
Sbjct: 391 QNGNEE 396
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 60/117 (51%), Gaps = 2/117 (1%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG++ D + +F+ P RD V+WN++V A +GL EAL+ E M L+N PN
Sbjct: 559 MYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYM-QLENVKPNHA 617
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEF 116
++ AV+ G E+ + M + GL+P S V+ R ++S E
Sbjct: 618 TFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALEL 674
>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
Length = 694
Score = 348 bits (892), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 190/550 (34%), Positives = 313/550 (56%), Gaps = 12/550 (2%)
Query: 55 ETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGK 114
+ PNL+ W+ + G + A+ + M + GL P++ T +L +CA+ + G+
Sbjct: 50 QEPNLLIWNTMFRGHALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIRKEGQ 109
Query: 115 EFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
+ HG++ + GF + +V L+ +Y + G + A K+F S ++ VS +I GY G
Sbjct: 110 QIHGHVLKLGFDLDIYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRG 169
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTF 234
+ A++LFD++ + ++SWN+MISGYV+ Y EA +F++++M + P T
Sbjct: 170 YIESAQKLFDEIP----GKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTM 225
Query: 235 GSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIEN 294
+V+ ACA +S+ G+ +H+ G S+ + AL+++Y ++ ++ A FD + N
Sbjct: 226 VTVVSACAQSDSIELGRHVHSWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWN 285
Query: 295 IENLLGKMKEDGF-EPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ 353
+ + G+ N+Y A+ LF EML TP+ T+ IL AC+ L ++ G+
Sbjct: 286 KDVISWNTLIGGYTHMNLYK-EALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRW 344
Query: 354 VHAYAIRC--GYDSDVH-IGTALVDMYAKCGSLKHARLAY-KRISTPDLVSQNAMLTAYA 409
+H Y + G ++V + T+L+DMYAKCG + A+ + +S L + NAM++ +A
Sbjct: 345 IHVYINKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFA 404
Query: 410 MHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSL 468
MHG F R+ +G PD I+F+ LSAC H+G + G F M Y++ P L
Sbjct: 405 MHGRANAAFDIFSRMRMNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMTRGYEITPKL 464
Query: 469 KHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIE 528
+HY CM+DLL +G EA E I +PM PD V+W +LL C HGNLE G+ A +LI+
Sbjct: 465 EHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIK 524
Query: 529 LEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKS-PGCSWIEDRDEIHKFRASD 587
+EP N+G+YV+L+N++A AGRW+++A+ R + D+ M K PGCS IE +H+F D
Sbjct: 525 IEPGNSGSYVLLSNIYAAAGRWNEVAKIRALLNDKGMKKKVPGCSSIEIDSVVHEFIIGD 584
Query: 588 RSHDRSEEIY 597
+ H ++ EIY
Sbjct: 585 KLHPQNREIY 594
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 120/448 (26%), Positives = 208/448 (46%), Gaps = 80/448 (17%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY + G L+DA+KVF + RD VS+ +++ + G + A + + + D +V
Sbjct: 133 MYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQKLFDEIPGKD-----VV 187
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFR--MQAEGLEPNARTLSSVLPACARLQKLSLGKEFHG 118
SW+A+I G+ + G +EA+ LF+ M + P+ T+ +V+ ACA+ + LG+ H
Sbjct: 188 SWNAMISGYVETGNYKEALE-LFKEMMMMTNVRPDESTMVTVVSACAQSDSIELGRHVHS 246
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
+I +GF SN +VN L+D+Y + G++ +A ++F K+ +S NT+I GY
Sbjct: 247 WINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGYT------- 299
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
H+ +LY EA +F+++L R G P T S+L
Sbjct: 300 ---------HM-------------------NLYKEALLLFQEML-RSGETPNDVTMLSIL 330
Query: 239 IACADMNSLRKGKEIHAL---AIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
ACA + ++ G+ IH + + + + + +L++MY + D+ AAQ FD +
Sbjct: 331 PACAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSN 390
Query: 296 ENLLGKMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSA 341
+L TWNAM +FS M + PD T +LSA
Sbjct: 391 RSL-------------STWNAMISGFAMHGRANAAFDIFSRMRMNGIEPDDITFVGLLSA 437
Query: 342 CSSLATMERGKQVHAYAIRCGYDSDV---HIGTALVDMYAKCGSLKHARLAYKRIST-PD 397
CS ++ G+ + R GY+ H G ++D+ G K A + PD
Sbjct: 438 CSHSGMLDLGRNIFRSMTR-GYEITPKLEHYG-CMIDLLGHSGLFKEAEEMINTMPMEPD 495
Query: 398 LVSQNAMLTAYAMHGHGKEGIAHFRRIL 425
V ++L A +HG+ + G + ++++
Sbjct: 496 GVIWCSLLKACKIHGNLELGESFAKKLI 523
Score = 42.7 bits (99), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 36/178 (20%), Positives = 75/178 (42%), Gaps = 4/178 (2%)
Query: 352 KQVHAYAIRCGYDSDVHIGTALVD---MYAKCGSLKHARLAYKRISTPDLVSQNAMLTAY 408
+ +HA I+ G + + + L++ + +A + I P+L+ N M +
Sbjct: 5 RXIHAQMIKTGLHNTNYALSKLLEFCVVSPHFDGFPYAISVFDTIQEPNLLIWNTMFRGH 64
Query: 409 AMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSL 468
A+ + + +++ G PD +F L +C + K G + + +
Sbjct: 65 ALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHGHVLKLGFDLDI 124
Query: 469 KHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRL 526
+T ++ + ++ G L +A + + I D V + AL+ G VS G +E Q D +
Sbjct: 125 YVHTSLISMYAQNGRLEDARK-VFDISSHRDVVSYTALIAGYVSRGYIESAQKLFDEI 181
>gi|147856499|emb|CAN78640.1| hypothetical protein VITISV_031739 [Vitis vinifera]
Length = 954
Score = 347 bits (891), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 193/612 (31%), Positives = 326/612 (53%), Gaps = 43/612 (7%)
Query: 29 VVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAE 88
VV+ A GLV +A E +S ++ + NL+ W++++ +GY EEA+ + RM+
Sbjct: 72 VVSVYAGFGLVSDAQRVFE-VSPIECFS-NLLLWNSILRANVAHGYCEEALEIYCRMRKL 129
Query: 89 GLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSA 148
G+ + T V+ ACA + L + HG++ GF N V N L+ +Y + G M A
Sbjct: 130 GVSADGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDA 189
Query: 149 LKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDN 208
K+F + ++++ VS NT++ GY N + A E+F M G++ +++W S++S +
Sbjct: 190 RKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARC 249
Query: 209 SLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFV 268
+ E +F + MR GI T+ VL D+ + +GK IH + G ++ FV
Sbjct: 250 GQHVETMELFGRMRMR-GIGATAEALAVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLFV 308
Query: 269 GGALVEMYCRYQDLVAAQMAFDEI----------------------ENIENLLGKMKEDG 306
+L+ +Y ++ ++ AA++ F EI E L K D
Sbjct: 309 KNSLICLYGKHGNVNAARILFLEIKTKNIVSWNALISSYADLGWCDEAFAIFLQLEKTDE 368
Query: 307 F---EPNVYTWNA--------------MQLFSEMLSLDLTPDIYTVGIILSACSSLATME 349
+ PNV +W+A ++LF M + + T+ +LS C+ LA +
Sbjct: 369 YPMVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLAKVKANSVTIASVLSVCAELAALH 428
Query: 350 RGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYA 409
G+++H + +R D ++ +G L++MY K GS K L +++I DL+S N M+ Y
Sbjct: 429 LGREIHGHVVRSLMDGNILVGNGLINMYTKSGSFKEGNLVFEKIENKDLISWNTMVAGYG 488
Query: 410 MHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFD-LMAYYDVKPSL 468
+HG G+ I F +++ GF PD ++F++ LSAC HAG + G E FD ++ + V+P +
Sbjct: 489 IHGLGENAIRTFDQMIKDGFEPDGVTFVAVLSACSHAGLVAEGRELFDKMIKEFRVEPQM 548
Query: 469 KHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIE 528
+HY CMVDLL RAG L EA + +K +P+ P++ +WGALL C H N E + A ++
Sbjct: 549 EHYACMVDLLGRAGLLQEASKVVKSMPVEPNACVWGALLNSCRMHKNTEVAEETASQIFN 608
Query: 529 LEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDR 588
L G+Y++L+N++A +GRW D A+ R K + + K+PG SWI+ + +++ F A +
Sbjct: 609 LNSEIAGSYMLLSNIYAASGRWEDSAKVRISAKTKGLKKTPGQSWIQVKKKVYMFSAGNT 668
Query: 589 SHDRSEEIYTII 600
H EE+Y I+
Sbjct: 669 QHAELEEVYRIL 680
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 125/417 (29%), Positives = 206/417 (49%), Gaps = 8/417 (1%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGK G +DDA+KVF+ M R CVSWN++V+ A N A E M S E PNLV
Sbjct: 179 MYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLE-PNLV 237
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W++++ + G E + + RM+ G+ A L+ VL L GK HGY+
Sbjct: 238 TWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVVLSVSVDLAAFDEGKVIHGYV 297
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ GF + FV N L+ +Y + G++ +A +F + KN VS N +I Y + G EA
Sbjct: 298 VKGGFENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSWNALISSYADLGWCDEAF 357
Query: 181 ELFDQMEHLG----VQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGS 236
+F Q+E V+ ++SW+++I G+ +EA +FR + + ++ S T S
Sbjct: 358 AIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLAK-VKANSVTIAS 416
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
VL CA++ +L G+EIH + + + VG L+ MY + + F++IEN +
Sbjct: 417 VLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGLINMYTKSGSFKEGNLVFEKIENKD 476
Query: 297 NLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHA 356
+ G+ + NA++ F +M+ PD T +LSACS + G+++
Sbjct: 477 LISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVAVLSACSHAGLVAEGRELFD 536
Query: 357 YAIR-CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST-PDLVSQNAMLTAYAMH 411
I+ + + +VD+ + G L+ A K + P+ A+L + MH
Sbjct: 537 KMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKVVKSMPVEPNACVWGALLNSCRMH 593
>gi|359482518|ref|XP_002279880.2| PREDICTED: uncharacterized protein LOC100266920 [Vitis vinifera]
Length = 1753
Score = 347 bits (891), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 194/612 (31%), Positives = 329/612 (53%), Gaps = 43/612 (7%)
Query: 29 VVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAE 88
VV+ A GLV +A E +S ++ + NL+ W++++ +GY EEA+ + RM+
Sbjct: 910 VVSVYAGFGLVSDAQRVFE-VSPIECFS-NLLLWNSILRANVAHGYCEEALEIYCRMRKL 967
Query: 89 GLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSA 148
G+ + T V+ ACA + L + HG++ GF N V N L+ +Y + G M A
Sbjct: 968 GVSADGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDA 1027
Query: 149 LKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDN 208
K+F + ++++ VS NT++ GY N + A E+F M G++ +++W S++S +
Sbjct: 1028 RKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARC 1087
Query: 209 SLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFV 268
+ E +F + MR GI T+ VL D+ + +GK IH + G ++ FV
Sbjct: 1088 GQHVETMELFGRMRMR-GIGATAEALAVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLFV 1146
Query: 269 GGALVEMYCRYQDLVAAQMAFDEIE--NIEN--------------------LLGKMKEDG 306
+L+ +Y ++ ++ AA++ F EI+ NI + L K D
Sbjct: 1147 KNSLICLYGKHGNVNAARILFLEIKTKNIVSWNALISSYADLGWCDEAFAIFLQLEKTDE 1206
Query: 307 F---EPNVYTWNA--------------MQLFSEMLSLDLTPDIYTVGIILSACSSLATME 349
+ PNV +W+A ++LF M + + T+ +LS C+ LA +
Sbjct: 1207 YPMVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLAKVKANSVTIASVLSVCAELAALH 1266
Query: 350 RGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYA 409
G+++H + +R D ++ +G L++MY K GS K L +++I DL+S N M+ Y
Sbjct: 1267 LGREIHGHVVRSLMDGNILVGNGLINMYTKSGSFKEGNLVFEKIENKDLISWNTMVAGYG 1326
Query: 410 MHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFD-LMAYYDVKPSL 468
+HG G+ I F +++ GF PD ++F++ LSAC HAG + G E FD ++ + V+P +
Sbjct: 1327 IHGLGENAIRTFDQMIKDGFEPDGVTFVAVLSACSHAGLVAEGRELFDKMIKEFRVEPQM 1386
Query: 469 KHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIE 528
+HY CMVDLL RAG L EA + +K +P+ P++ +WGALL C H N E + A ++
Sbjct: 1387 EHYACMVDLLGRAGLLQEASKVVKSMPVEPNACVWGALLNSCRMHKNTEVAEETASQIFN 1446
Query: 529 LEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDR 588
L G+Y++L+N++A +GRW D A+ R K + + K+PG SWI+ + +++ F A +
Sbjct: 1447 LNSEIAGSYMLLSNIYAASGRWEDSAKVRISAKTKGLKKTPGQSWIQVKKKVYMFSAGNT 1506
Query: 589 SHDRSEEIYTII 600
H EE+Y I+
Sbjct: 1507 QHAELEEVYRIL 1518
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 125/417 (29%), Positives = 206/417 (49%), Gaps = 8/417 (1%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGK G +DDA+KVF+ M R CVSWN++V+ A N A E M S E PNLV
Sbjct: 1017 MYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLE-PNLV 1075
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W++++ + G E + + RM+ G+ A L+ VL L GK HGY+
Sbjct: 1076 TWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVVLSVSVDLAAFDEGKVIHGYV 1135
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ GF + FV N L+ +Y + G++ +A +F + KN VS N +I Y + G EA
Sbjct: 1136 VKGGFENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSWNALISSYADLGWCDEAF 1195
Query: 181 ELFDQMEHLG----VQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGS 236
+F Q+E V+ ++SW+++I G+ +EA +FR + + ++ S T S
Sbjct: 1196 AIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLAK-VKANSVTIAS 1254
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
VL CA++ +L G+EIH + + + VG L+ MY + + F++IEN +
Sbjct: 1255 VLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGLINMYTKSGSFKEGNLVFEKIENKD 1314
Query: 297 NLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHA 356
+ G+ + NA++ F +M+ PD T +LSACS + G+++
Sbjct: 1315 LISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVAVLSACSHAGLVAEGRELFD 1374
Query: 357 YAIR-CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST-PDLVSQNAMLTAYAMH 411
I+ + + +VD+ + G L+ A K + P+ A+L + MH
Sbjct: 1375 KMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKVVKSMPVEPNACVWGALLNSCRMH 1431
>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 999
Score = 347 bits (891), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 210/705 (29%), Positives = 355/705 (50%), Gaps = 127/705 (18%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANG-----------LVLEALECLE-- 47
+Y K G L AKKVF+ + RD VSW ++++ + NG +VL A +E
Sbjct: 208 LYFKNGFLSSAKKVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQIVLSACTKVEFF 267
Query: 48 -----------------------RMSSLDNETPNL---------------VSWSAVIGGF 69
+ +L + + NL VS++++I G
Sbjct: 268 EFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGL 327
Query: 70 TQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNP 129
Q GY A+ + +M + +P+ T++S+L ACA + L GK+FH Y + G S+
Sbjct: 328 AQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDI 387
Query: 130 FVVNGLVDVYRRCGDMLSA----------------LKIFSKFSIKNEV-----------S 162
V L+D+Y +C D+ +A +IF++ I+ V +
Sbjct: 388 VVEGSLLDLYVKCSDIKTAHEFFLCYGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKT 447
Query: 163 CNTI----------------------------IVGYCENGNVAEARELFDQMEHLGVQRG 194
C T+ I Y ++G + A ++F +++ +
Sbjct: 448 CTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLK----END 503
Query: 195 IISWNSMISGYVDNSLYDEAFSMFRDLLMRD-GIEPTSFTFGSVLIACADMNSLRKGKEI 253
++SW +MI+GY + + EA ++F++ M+D GI+ + F S + ACA + +L +G++I
Sbjct: 504 VVSWTAMIAGYTQHDKFTEALNLFKE--MQDQGIKSDNIGFASAISACAGIQALDQGRQI 561
Query: 254 HALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYT 313
HA + G D +G ALV +Y R + A AFD+I +N+ GF + Y
Sbjct: 562 HAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIYAKDNVSWNSLVSGFAQSGYF 621
Query: 314 WNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTAL 373
A+ +F++M L + +T G +SA +++A + GKQ+H + GYDS+ + AL
Sbjct: 622 EEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRIGKQIHGMIRKTGYDSETEVSNAL 681
Query: 374 VDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDH 433
+ +YAKCG++ D +S N+M+T Y+ HG G E + F + P+H
Sbjct: 682 ITLYAKCGTI-------------DDISWNSMITGYSQHGCGFEALKLFEDMKQLDVLPNH 728
Query: 434 ISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIK 492
++F+ LSAC H G + G +F M+ +++ P +HY C+VDLL R+G L A F++
Sbjct: 729 VTFVGVLSACSHVGLVDEGISYFRSMSEAHNLVPKPEHYACVVDLLGRSGLLSRAKRFVE 788
Query: 493 KIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSD 552
++P+ PD+++W LL C H N++ G+ AA L+ELEP ++ YV+++N++A +G+W
Sbjct: 789 EMPIQPDAMVWRTLLSACNVHKNIDIGEFAASHLLELEPKDSATYVLVSNMYAVSGKWDC 848
Query: 553 LARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
RTRQ MKDR + K PG SW+E + +H F A D++H R++ IY
Sbjct: 849 RDRTRQMMKDRGVKKEPGRSWVEVDNSVHAFFAGDQNHPRADMIY 893
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 140/491 (28%), Positives = 230/491 (46%), Gaps = 71/491 (14%)
Query: 27 NSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQ 86
N ++ NG + A + E + + D+ VSW A+I G +QNGY+EEA+ + ++
Sbjct: 203 NPLIDLYFKNGFLSSAKKVFENLKARDS-----VSWVAMISGLSQNGYEEEAMLLFCQI- 256
Query: 87 AEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDML 146
VL AC +++ GK+ HG + + GF S +V N LV +Y R G++
Sbjct: 257 -------------VLSACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLS 303
Query: 147 SALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYV 206
SA +IF S ++ VS N++I G + G + A LF +M +L Q+
Sbjct: 304 SAEQIFHCMSQRDRVSYNSLISGLAQQGYINRALALFKKM-NLDCQK------------- 349
Query: 207 DNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDT 266
P T S+L ACA + +L GK+ H+ AI G+ SD
Sbjct: 350 ----------------------PDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDI 387
Query: 267 FVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSL 326
V G+L+++Y + D+ A F ++NL + Q+F++M
Sbjct: 388 VVEGSLLDLYVKCSDIKTAHEFFLCYGQLDNLN---------------KSFQIFTQMQIE 432
Query: 327 DLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHA 386
+ P+ +T IL C++L + G+Q+H ++ G+ +V++ + L+DMYAK G L HA
Sbjct: 433 GIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHA 492
Query: 387 RLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHA 446
++R+ D+VS AM+ Y H E + F+ + G + D+I F SA+SAC
Sbjct: 493 LKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGI 552
Query: 447 GSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGAL 506
++ G + L +V L +R G++ EAY +I A D+V W +L
Sbjct: 553 QALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQI-YAKDNVSWNSL 611
Query: 507 LGGCVSHGNLE 517
+ G G E
Sbjct: 612 VSGFAQSGYFE 622
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 110/464 (23%), Positives = 196/464 (42%), Gaps = 71/464 (15%)
Query: 54 NETP--NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACA-RLQKL 110
+E P +L W+ + F G+ RM + +E + R + VL C+
Sbjct: 121 DEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNVEFDERIFAVVLRGCSGNAVSF 180
Query: 111 SLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGY 170
++ H +GF S+ F+ N L+D+Y +
Sbjct: 181 RFVEQIHAKTITSGFESSTFICNPLIDLYFK----------------------------- 211
Query: 171 CENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPT 230
NG ++ A+++F+ ++ R +SW +MISG N +EA +F +
Sbjct: 212 --NGFLSSAKKVFENLK----ARDSVSWVAMISGLSQNGYEEEAMLLFCQI--------- 256
Query: 231 SFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFD 290
VL AC + GK++H L + G S+T+V ALV +Y R +L +A+ F
Sbjct: 257 ------VLSACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFH 310
Query: 291 EIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLT-PDIYTVGIILSACSSLATME 349
+ + + G Y A+ LF +M +LD PD TV +LSAC+S+ +
Sbjct: 311 CMSQRDRVSYNSLISGLAQQGYINRALALFKKM-NLDCQKPDCVTVASLLSACASVGALP 369
Query: 350 RGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYA 409
GKQ H+YAI+ G SD+ + +L+D+Y KC +K A + Y
Sbjct: 370 NGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTA---------------HEFFLCYG 414
Query: 410 MHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLK 469
+ + F ++ G P+ ++ S L C G+ G + + + ++
Sbjct: 415 QLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVY 474
Query: 470 HYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSH 513
+ ++D+ ++ G+L A + +++ D V W A++ G H
Sbjct: 475 VSSVLIDMYAKHGKLDHALKIFRRLK-ENDVVSWTAMIAGYTQH 517
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 109/509 (21%), Positives = 211/509 (41%), Gaps = 90/509 (17%)
Query: 75 DEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNG 134
+ IG L M+ G+ N++T +L C + G +
Sbjct: 62 NASGIGYLHLMEQHGVRANSQTFLWLLEGCLNSRSFYDGLK------------------- 102
Query: 135 LVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRG 194
L+D Y GD+ A+ +F + I++ +SC
Sbjct: 103 LIDFYLAFGDLNCAVNVFDEMPIRS-LSC------------------------------- 130
Query: 195 IISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACA-DMNSLRKGKEI 253
WN + + ++ L +FR +L ++ +E F VL C+ + S R ++I
Sbjct: 131 ---WNRIFNTFIAERLMGRVPGLFRRMLTKN-VEFDERIFAVVLRGCSGNAVSFRFVEQI 186
Query: 254 HALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYT 313
HA I G +S TF+ L+++Y + L +A+ F+ ++ +++ G N Y
Sbjct: 187 HAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVFENLKARDSVSWVAMISGLSQNGYE 246
Query: 314 WNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTAL 373
AM LF + I+LSAC+ + E GKQ+H ++ G+ S+ ++ AL
Sbjct: 247 EEAMLLFCQ--------------IVLSACTKVEFFEFGKQLHGLVLKQGFSSETYVCNAL 292
Query: 374 VDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDH 433
V +Y++ G+L A + +S D VS N++++ A G+ +A F+++ +PD
Sbjct: 293 VTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRALALFKKMNLDCQKPDC 352
Query: 434 ISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEF--- 490
++ S LSAC G++ G +F + + ++DL + ++ A+EF
Sbjct: 353 VTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFFLC 412
Query: 491 ----------------IKKIPMAPDSVMWGALLGGCVSHGNLEFG-QIAADRLIELEPNN 533
++ + P+ + ++L C + G + G QI L N
Sbjct: 413 YGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFN 472
Query: 534 TGNYVMLANLFAYAGRWSDLARTRQKMKD 562
+L +++A G+ + +++K+
Sbjct: 473 VYVSSVLIDMYAKHGKLDHALKIFRRLKE 501
>gi|225457044|ref|XP_002279639.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300
[Vitis vinifera]
Length = 807
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 189/602 (31%), Positives = 314/602 (52%), Gaps = 68/602 (11%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGS+ +A+ +F + ++D V N+V+
Sbjct: 255 MYMKCGSIKNAENIFNSILDKDSVRRNAVI------------------------------ 284
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
W+ +I G+ NG +A+ + +M G++P+ T+ S+ C+ ++ GK+ HG I
Sbjct: 285 -WNVMISGYVSNGCFSQALLLFIKMMVWGIKPDYSTMVSLFSLCSESLDIAFGKQIHGLI 343
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G +N V L+D+Y +CGDM + LKIF + +N N
Sbjct: 344 FKFGLKNNIRVETALLDMYLKCGDMGTGLKIFRR----------------SQNHN----- 382
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+I W+++IS + +A +F + M DG+ + +VL A
Sbjct: 383 --------------LIMWSAVISNCAQSGCPTKALELFYEFKMEDGLADSGILV-AVLRA 427
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C+ + +G +IH LA +G SD FVG ALV++Y + +D+ ++ F + + +
Sbjct: 428 CSSLTLKPEGMQIHGLATKMGFVSDVFVGSALVDLYAKCRDMGYSKKVFLRLSQKDLVSW 487
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G+ + A++ F +M ++ P+ T+ ILS C+ L+ M K+VH Y IR
Sbjct: 488 NALISGYAQDECADEALKAFRDMQLEEIRPNTVTIACILSVCAHLSVMTLCKEVHGYLIR 547
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
G S V + +L+ YAKCG + + ++++ + VS N+++ MH E I
Sbjct: 548 QGLGSTVLVSNSLIATYAKCGDINSSLYTFEKMPERNDVSWNSIILGMGMHSRTDEMIVL 607
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLS 479
F +++ASG +PDH++F + LSAC HAG + G ++F M +++KP L+ YTCMVDLL
Sbjct: 608 FDKMVASGIKPDHVTFTAILSACSHAGRVDEGCKYFKSMVEDFNLKPQLEQYTCMVDLLG 667
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
RAG L +AY+ I +P PD +WG+LLG C +HG+ +I A+ + +L P++ G V+
Sbjct: 668 RAGHLNQAYDLIMAMPCTPDDRIWGSLLGSCKNHGDEILAEIVANHIFKLVPSSVGYRVL 727
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTI 599
LANL+ G+ + ++ R ++KD + K PGCSWIE + H F A DRSH +S+EIY
Sbjct: 728 LANLYENLGKGREGSKVRSEIKDMGLKKKPGCSWIEVDNNFHIFIAGDRSHSQSDEIYAA 787
Query: 600 ID 601
++
Sbjct: 788 VE 789
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 148/555 (26%), Positives = 256/555 (46%), Gaps = 65/555 (11%)
Query: 4 KCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWS 63
K G LDD V NS++T G+V +A++ E+M +D LVSW+
Sbjct: 137 KLGVLDDVSVV------------NSLLTMYWKCGVVEDAVQMFEKMPEVD-----LVSWN 179
Query: 64 AVIGGFTQNGYDEEAIGMLFR-MQAE-GLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
+I GF Q D M FR M E G+ PN S + +C+ LQ L+ G+E HG +
Sbjct: 180 TMISGF-QKSMDYTRSLMFFRSMVWEFGIYPNRVACVSSILSCSSLQSLTHGREIHGVVV 238
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFS----KFSI-KNEVSCNTIIVGYCENGNV 176
++G ++V+ L+++Y +CG + +A IF+ K S+ +N V N +I GY NG
Sbjct: 239 KSGLDVEEYLVSSLIEMYMKCGSIKNAENIFNSILDKDSVRRNAVIWNVMISGYVSNGCF 298
Query: 177 AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGS 236
++A LF +M + W GI+P T S
Sbjct: 299 SQALLLFIKM---------MVW---------------------------GIKPDYSTMVS 322
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
+ C++ + GK+IH L GL+++ V AL++MY + D+ F +N
Sbjct: 323 LFSLCSESLDIAFGKQIHGLIFKFGLKNNIRVETALLDMYLKCGDMGTGLKIFRRSQNHN 382
Query: 297 NLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHA 356
++ + A++LF E D D + +L ACSSL G Q+H
Sbjct: 383 LIMWSAVISNCAQSGCPTKALELFYEFKMEDGLADSGILVAVLRACSSLTLKPEGMQIHG 442
Query: 357 YAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKE 416
A + G+ SDV +G+ALVD+YAKC + +++ + R+S DLVS NA+++ YA E
Sbjct: 443 LATKMGFVSDVFVGSALVDLYAKCRDMGYSKKVFLRLSQKDLVSWNALISGYAQDECADE 502
Query: 417 GIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVD 476
+ FR + RP+ ++ LS C H + E + + ++ ++
Sbjct: 503 ALKAFRDMQLEEIRPNTVTIACILSVCAHLSVMTLCKEVHGYLIRQGLGSTVLVSNSLIA 562
Query: 477 LLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIE--LEPNNT 534
++ G++ + +K+P D V W +++ G H + + D+++ ++P++
Sbjct: 563 TYAKCGDINSSLYTFEKMPERND-VSWNSIILGMGMHSRTDEMIVLFDKMVASGIKPDHV 621
Query: 535 GNYVMLANLFAYAGR 549
+ + + ++AGR
Sbjct: 622 -TFTAILSACSHAGR 635
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 109/461 (23%), Positives = 204/461 (44%), Gaps = 62/461 (13%)
Query: 65 VIGGFTQNGYDEEAIGMLFRMQAEGLEPNA-RTLSSVLPACARLQKLSLGKEFHGYITRN 123
VI +T++G+ ++AIG+ +M +G++ R ++ A L + G++ HG++ +
Sbjct: 79 VIREYTEDGFFDDAIGVYLKMLDDGVKVEEFRYFPCLIKAFGGLCDVYKGRQIHGHVLKL 138
Query: 124 GFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELF 183
G + + VVN L+ +Y +CG V +A ++F
Sbjct: 139 GVLDDVSVVNSLLTMYWKCG-------------------------------VVEDAVQMF 167
Query: 184 DQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACAD 243
++M + ++SWN+MISG+ + Y + FR ++ GI P S +++C+
Sbjct: 168 EKMPEVD----LVSWNTMISGFQKSMDYTRSLMFFRSMVWEFGIYPNRVACVSSILSCSS 223
Query: 244 MNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK-M 302
+ SL G+EIH + + GL + ++ +L+EMY M I+N EN+ +
Sbjct: 224 LQSLTHGREIHGVVVKSGLDVEEYLVSSLIEMY----------MKCGSIKNAENIFNSIL 273
Query: 303 KEDGFEPNVYTWN--------------AMQLFSEMLSLDLTPDIYTVGIILSACSSLATM 348
+D N WN A+ LF +M+ + PD T+ + S CS +
Sbjct: 274 DKDSVRRNAVIWNVMISGYVSNGCFSQALLLFIKMMVWGIKPDYSTMVSLFSLCSESLDI 333
Query: 349 ERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAY 408
GKQ+H + G +++ + TAL+DMY KCG + ++R +L+ +A+++
Sbjct: 334 AFGKQIHGLIFKFGLKNNIRVETALLDMYLKCGDMGTGLKIFRRSQNHNLIMWSAVISNC 393
Query: 409 AMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSL 468
A G + + F D ++ L AC G + L +
Sbjct: 394 AQSGCPTKALELFYEFKMEDGLADSGILVAVLRACSSLTLKPEGMQIHGLATKMGFVSDV 453
Query: 469 KHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
+ +VDL ++ ++G + + ++ D V W AL+ G
Sbjct: 454 FVGSALVDLYAKCRDMGYSKKVFLRLSQK-DLVSWNALISG 493
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 168/324 (51%), Gaps = 11/324 (3%)
Query: 199 NSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI-ACADMNSLRKGKEIHALA 257
N++I Y ++ +D+A ++ +L DG++ F + LI A + + KG++IH
Sbjct: 77 NNVIREYTEDGFFDDAIGVYLKML-DDGVKVEEFRYFPCLIKAFGGLCDVYKGRQIHGHV 135
Query: 258 IALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNV-YTWNA 316
+ LG+ D V +L+ MY + + A F+++ ++ + GF+ ++ YT +
Sbjct: 136 LKLGVLDDVSVVNSLLTMYWKCGVVEDAVQMFEKMPEVDLVSWNTMISGFQKSMDYTRSL 195
Query: 317 MQLFSEMLSLDLTPD-IYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVD 375
M S + + P+ + V ILS CSSL ++ G+++H ++ G D + ++ ++L++
Sbjct: 196 MFFRSMVWEFGIYPNRVACVSSILS-CSSLQSLTHGREIHGVVVKSGLDVEEYLVSSLIE 254
Query: 376 MYAKCGSLKHARLAYKRISTPDLVSQNA-----MLTAYAMHGHGKEGIAHFRRILASGFR 430
MY KCGS+K+A + I D V +NA M++ Y +G + + F +++ G +
Sbjct: 255 MYMKCGSIKNAENIFNSILDKDSVRRNAVIWNVMISGYVSNGCFSQALLLFIKMMVWGIK 314
Query: 431 PDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEF 490
PD+ + +S S C + I G + L+ + +K +++ T ++D+ + G++G +
Sbjct: 315 PDYSTMVSLFSLCSESLDIAFGKQIHGLIFKFGLKNNIRVETALLDMYLKCGDMGTGLKI 374
Query: 491 IKKIPMAPDSVMWGALLGGCVSHG 514
++ + +MW A++ C G
Sbjct: 375 FRR-SQNHNLIMWSAVISNCAQSG 397
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/279 (19%), Positives = 128/279 (45%), Gaps = 17/279 (6%)
Query: 288 AFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYT-VGIILSACSSLA 346
F + N++ + EDGF + A+ ++ +ML + + + ++ A L
Sbjct: 69 TFVSVSFANNVIREYTEDGFFDD-----AIGVYLKMLDDGVKVEEFRYFPCLIKAFGGLC 123
Query: 347 TMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLT 406
+ +G+Q+H + ++ G DV + +L+ MY KCG ++ A ++++ DLVS N M++
Sbjct: 124 DVYKGRQIHGHVLKLGVLDDVSVVNSLLTMYWKCGVVEDAVQMFEKMPEVDLVSWNTMIS 183
Query: 407 AYAMHGHGKEGIAHFRRILAS-GFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVK 465
+ + FR ++ G P+ ++ +S++ +C S+ G E ++ +
Sbjct: 184 GFQKSMDYTRSLMFFRSMVWEFGIYPNRVACVSSILSCSSLQSLTHGREIHGVVVKSGLD 243
Query: 466 PSLKHYTCMVDLLSRAGELGEAYEFIKKI----PMAPDSVMWGALLGGCVSHGNLEFGQI 521
+ ++++ + G + A I + ++V+W ++ G VS+G +
Sbjct: 244 VEEYLVSSLIEMYMKCGSIKNAENIFNSILDKDSVRRNAVIWNVMISGYVSNGCFSQALL 303
Query: 522 AADRLIE--LEPNNTGNYVMLANLFAYAGRWSDLARTRQ 558
+++ ++P +Y + +LF+ D+A +Q
Sbjct: 304 LFIKMMVWGIKP----DYSTMVSLFSLCSESLDIAFGKQ 338
>gi|225427963|ref|XP_002277549.1| PREDICTED: pentatricopeptide repeat-containing protein At2g21090
[Vitis vinifera]
Length = 612
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 186/562 (33%), Positives = 311/562 (55%), Gaps = 45/562 (8%)
Query: 77 EAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFM-SNPFVVNGL 135
EA+ L + GL ++RTL+S+L CA + L GK H ++ G F+ N L
Sbjct: 42 EAVSSLENLARRGLRLDSRTLASLLQHCADSRALREGKRVHLHLKLTGLKRPGTFLSNHL 101
Query: 136 VDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGI 195
+++Y +CG + A K+F K S +N S N ++ GY + G + AR+LFD+M ++ +
Sbjct: 102 INMYAKCGKEVEARKVFDKMSARNLYSWNNMLSGYAKLGMIKPARKLFDKMP----EKDV 157
Query: 196 ISWNSMISGYVDNSLYDEA---FSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKE 252
+SWN+M+ + +DEA +S FR L GI+ F+F VL C + + ++
Sbjct: 158 VSWNTMVIAHAQCGYWDEALRFYSEFRQL----GIQCNGFSFAGVLTVCVKLKEVGLTRQ 213
Query: 253 IHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGF----- 307
+H + G S+ + ++++ Y + + A+ FDE+ + L G+
Sbjct: 214 VHGQILVAGFLSNVVLSSSVLDAYVKCGLMGDARKLFDEMSARDVLAWTTMVSGYAKWGD 273
Query: 308 ------------EPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSA 341
E N +W A+ +LF++M+ + PD +T L A
Sbjct: 274 MKSANELFVEMPEKNPVSWTALISGYARNGMGHKALELFTKMMLFHVRPDQFTFSSCLCA 333
Query: 342 CSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTP-DLVS 400
C+S+A+++ GKQ+HAY +R + + + +AL+DMY+KCGSL R + + D+V
Sbjct: 334 CASIASLKHGKQIHAYLLRINFQPNTIVVSALIDMYSKCGSLGIGRKVFDLMGNKLDVVL 393
Query: 401 QNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA 460
N +++A A HG G+E I ++ SG +PD I+F+ L+AC H+G ++ G FF+ M+
Sbjct: 394 WNTIISALAQHGCGEEAIQMLDDMVRSGAKPDKITFVVILNACSHSGLVQQGLNFFESMS 453
Query: 461 Y-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFG 519
Y + PS +HY C++DLL RAG E + ++K+P PD +W ALLG C HG++E G
Sbjct: 454 CDYGIVPSQEHYACLIDLLGRAGCFEEVMDQLEKMPYKPDDRVWNALLGVCRIHGHIELG 513
Query: 520 QIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDE 579
+ AA+RLIELEP ++ YV+L++++A GRW + + RQ M +R++ K SW+E ++
Sbjct: 514 RKAAERLIELEPQSSTAYVLLSSIYAVLGRWESVQKVRQLMNERQVKKERAISWLEIENK 573
Query: 580 IHKFRASDRSHDRSEEIYTIID 601
+H F SD SH E+IY++++
Sbjct: 574 VHSFSVSDSSHPLKEQIYSVLE 595
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 127/434 (29%), Positives = 223/434 (51%), Gaps = 25/434 (5%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG +A+KVF M R+ SWN++++ A G++ A + ++M D +V
Sbjct: 104 MYAKCGKEVEARKVFDKMSARNLYSWNNMLSGYAKLGMIKPARKLFDKMPEKD-----VV 158
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ ++ Q GY +EA+ + G++ N + + VL C +L+++ L ++ HG I
Sbjct: 159 SWNTMVIAHAQCGYWDEALRFYSEFRQLGIQCNGFSFAGVLTVCVKLKEVGLTRQVHGQI 218
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
GF+SN + + ++D Y +CG M A K+F + S ++ ++ T++ GY + G++ A
Sbjct: 219 LVAGFLSNVVLSSSVLDAYVKCGLMGDARKLFDEMSARDVLAWTTMVSGYAKWGDMKSAN 278
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
ELF +M ++ +SW ++ISGY N + +A +F +++ + P FTF S L A
Sbjct: 279 ELFVEMP----EKNPVSWTALISGYARNGMGHKALELFTKMMLFH-VRPDQFTFSSCLCA 333
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIEN-IENLL 299
CA + SL+ GK+IHA + + Q +T V AL++MY + L + FD + N ++ +L
Sbjct: 334 CASIASLKHGKQIHAYLLRINFQPNTIVVSALIDMYSKCGSLGIGRKVFDLMGNKLDVVL 393
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
+ A+Q+ +M+ PD T +IL+ACS +++G ++
Sbjct: 394 WNTIISALAQHGCGEEAIQMLDDMVRSGAKPDKITFVVILNACSHSGLVQQGLNFFE-SM 452
Query: 360 RCGY---DSDVHIGTALVDMYAKCGSLKHA-----RLAYKRISTPDLVSQNAMLTAYAMH 411
C Y S H L+D+ + G + ++ YK PD NA+L +H
Sbjct: 453 SCDYGIVPSQEHYA-CLIDLLGRAGCFEEVMDQLEKMPYK----PDDRVWNALLGVCRIH 507
Query: 412 GHGKEGIAHFRRIL 425
GH + G R++
Sbjct: 508 GHIELGRKAAERLI 521
>gi|297720883|ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
gi|51535971|dbj|BAD38052.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|218190072|gb|EEC72499.1| hypothetical protein OsI_05871 [Oryza sativa Indica Group]
gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa Japonica Group]
Length = 922
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 213/695 (30%), Positives = 343/695 (49%), Gaps = 106/695 (15%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y + G + A+++F MP RD SWNS++T + +++A E+M NLVS
Sbjct: 137 YVQNGDITMARRLFDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPE-----RNLVS 191
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACA-----------RLQKL 110
W+ +I G+ + +A + +M EGL P+ +S L A R+ L
Sbjct: 192 WTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLAL 251
Query: 111 SLGKE--------------------------FHGYITRNGFMSNPFV--------VNGLV 136
G E F I RN + + + ++ +
Sbjct: 252 KTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAI 311
Query: 137 DVYRR------------------CGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
VY R CG + A +F + VS N +I GY +NG V E
Sbjct: 312 AVYERDPVKSIACRTALITGLAQCGRIDDARILFEQIPEPIVVSWNALITGYMQNGMVNE 371
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
A+ELFD+M R ISW MI+GY N +EA + ++L R G+ P+ + S+
Sbjct: 372 AKELFDKMPF----RNTISWAGMIAGYAQNGRSEEALGLLQEL-HRSGMLPSLSSLTSIF 426
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMY--CR---YQDLVAAQMAFDEIE 293
AC+++ +L G ++H+LA+ +G Q ++F AL+ MY CR Y V ++M +I
Sbjct: 427 FACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIV 486
Query: 294 NIENLLGKMKEDGF---EPNVY---------TWN--------------AMQLFSEMLSLD 327
+ + L + ++ N + +W AM F M
Sbjct: 487 SWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEH 546
Query: 328 LTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHAR 387
P+ + I+L C SL + G+Q+H AI+ G DS++ + AL+ MY KCG R
Sbjct: 547 ELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCGCADSRR 606
Query: 388 LAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAG 447
+ + + D+ + N ++T YA HG G+E I ++ + ++G P+ ++F+ L+AC HAG
Sbjct: 607 I-FDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAG 665
Query: 448 SIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGAL 506
+ G +FF M+ Y + P +HY CMVDLL R G++ A +FI +P+ PD+V+W AL
Sbjct: 666 LVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSAL 725
Query: 507 LGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMH 566
LG C H N E G+ AA++L +EP+N GNYVML+N+++ G W ++A R+ MK + +
Sbjct: 726 LGACKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQGVI 785
Query: 567 KSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
K PGCSW + +D++H F D+ H++ EEI ++
Sbjct: 786 KEPGCSWTQIKDKMHSFVTGDKQHEQIEEIVATLE 820
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 127/560 (22%), Positives = 228/560 (40%), Gaps = 127/560 (22%)
Query: 3 GKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSW 62
G+ G + +A++VF MP RD ++WNS+++A NG+ A + +
Sbjct: 45 GRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDL----------------Y 88
Query: 63 SAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQK-LSLGKEFHGYIT 121
A+ GG N RT + +L RL + L + F G +
Sbjct: 89 DAISGG------------------------NMRTGAILLSGYGRLGRVLEARRVFDGMLE 124
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
R N N ++ Y + GD+ A ++F ++ S N+++ GYC + + +AR
Sbjct: 125 R-----NTVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSWNSMLTGYCHSLQMVDARN 179
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
LF++M +R ++SW MISGY + +A+ +F + R+G+ P F S L A
Sbjct: 180 LFEKMP----ERNLVSWTVMISGYGRIENHGKAWDIFCK-MHREGLLPDQSNFASALSAV 234
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK 301
+ +L + + LA+ G + D +G A++ +Y R ++ + F
Sbjct: 235 KGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKF------------ 282
Query: 302 MKEDGFEPNVYTWNAM-QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
E E N YTW+ M S +D +++A ER V + A R
Sbjct: 283 -FESMIERNEYTWSTMIAALSHGGRID---------------AAIAVYER-DPVKSIACR 325
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLT-------------- 406
TAL+ A+CG + AR+ +++I P +VS NA++T
Sbjct: 326 ----------TALITGLAQCGRIDDARILFEQIPEPIVVSWNALITGYMQNGMVNEAKEL 375
Query: 407 -----------------AYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSI 449
YA +G +E + + + SG P S S AC + ++
Sbjct: 376 FDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVAL 435
Query: 450 KTGSEFFDLMAYYDVKPSLKHYTC--MVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALL 507
+TG++ L V + C ++ + + + A + ++ + D V W + L
Sbjct: 436 ETGTQVHSLAV--KVGCQFNSFACNALITMYGKCRNMEYARQVFSRM-VTKDIVSWNSFL 492
Query: 508 GGCVSHGNLEFGQIAADRLI 527
V + L+ + D ++
Sbjct: 493 AALVQNDLLDEARNTFDNML 512
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 113/229 (49%), Gaps = 6/229 (2%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKC +++ A++VF M +D VSWNS + A N L+ EA + M S D+ V
Sbjct: 463 MYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDD-----V 517
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ +I + EA+G M E PN+ L+ +L C L +G++ H
Sbjct: 518 SWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVA 577
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G S V N L+ +Y +CG + +IF ++ + NTII GY ++G EA
Sbjct: 578 IKLGMDSELIVANALISMYFKCG-CADSRRIFDLMEERDIFTWNTIITGYAQHGLGREAI 636
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEP 229
+++ ME GV +++ +++ L DE + F+ + G+ P
Sbjct: 637 KMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLTP 685
>gi|222622177|gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
Length = 922
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 213/695 (30%), Positives = 343/695 (49%), Gaps = 106/695 (15%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y + G + A+++F MP RD SWNS++T + +++A E+M NLVS
Sbjct: 137 YVQNGDITMARRLFDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPE-----RNLVS 191
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACA-----------RLQKL 110
W+ +I G+ + +A + +M EGL P+ +S L A R+ L
Sbjct: 192 WTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLAL 251
Query: 111 SLGKE--------------------------FHGYITRNGFMSNPFV--------VNGLV 136
G E F I RN + + + ++ +
Sbjct: 252 KTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAI 311
Query: 137 DVYRR------------------CGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
VY R CG + A +F + VS N +I GY +NG V E
Sbjct: 312 AVYERDPVKSIACRTALITGLAQCGRIDDARILFEQIPEPIVVSWNALITGYMQNGMVNE 371
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
A+ELFD+M R ISW MI+GY N +EA + ++L R G+ P+ + S+
Sbjct: 372 AKELFDKMPF----RNTISWAGMIAGYAQNGRSEEALGLLQEL-HRSGMLPSLSSLTSIF 426
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMY--CR---YQDLVAAQMAFDEIE 293
AC+++ +L G ++H+LA+ +G Q ++F AL+ MY CR Y V ++M +I
Sbjct: 427 FACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIV 486
Query: 294 NIENLLGKMKEDGF---EPNVY---------TWN--------------AMQLFSEMLSLD 327
+ + L + ++ N + +W AM F M
Sbjct: 487 SWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEH 546
Query: 328 LTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHAR 387
P+ + I+L C SL + G+Q+H AI+ G DS++ + AL+ MY KCG R
Sbjct: 547 ELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCGCADSRR 606
Query: 388 LAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAG 447
+ + + D+ + N ++T YA HG G+E I ++ + ++G P+ ++F+ L+AC HAG
Sbjct: 607 I-FDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAG 665
Query: 448 SIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGAL 506
+ G +FF M+ Y + P +HY CMVDLL R G++ A +FI +P+ PD+V+W AL
Sbjct: 666 LVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSAL 725
Query: 507 LGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMH 566
LG C H N E G+ AA++L +EP+N GNYVML+N+++ G W ++A R+ MK + +
Sbjct: 726 LGACKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQGVI 785
Query: 567 KSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
K PGCSW + +D++H F D+ H++ EEI ++
Sbjct: 786 KEPGCSWTQIKDKMHSFVTGDKQHEQIEEIVATLE 820
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 127/560 (22%), Positives = 228/560 (40%), Gaps = 127/560 (22%)
Query: 3 GKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSW 62
G+ G + +A++VF MP RD ++WNS+++A NG+ A + +
Sbjct: 45 GRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDL----------------Y 88
Query: 63 SAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQK-LSLGKEFHGYIT 121
A+ GG N RT + +L RL + L + F G +
Sbjct: 89 DAISGG------------------------NMRTGAILLSGYGRLGRVLEARRVFDGMLE 124
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
R N N ++ Y + GD+ A ++F ++ S N+++ GYC + + +AR
Sbjct: 125 R-----NTVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSWNSMLTGYCHSLQMVDARN 179
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
LF++M +R ++SW MISGY + +A+ +F + R+G+ P F S L A
Sbjct: 180 LFEKMP----ERNLVSWTVMISGYGRIENHGKAWDIFCK-MHREGLLPDQSNFASALSAV 234
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK 301
+ +L + + LA+ G + D +G A++ +Y R ++ + F
Sbjct: 235 KGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKF------------ 282
Query: 302 MKEDGFEPNVYTWNAM-QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
E E N YTW+ M S +D +++A ER V + A R
Sbjct: 283 -FESMIERNEYTWSTMIAALSHGGRID---------------AAIAVYER-DPVKSIACR 325
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLT-------------- 406
TAL+ A+CG + AR+ +++I P +VS NA++T
Sbjct: 326 ----------TALITGLAQCGRIDDARILFEQIPEPIVVSWNALITGYMQNGMVNEAKEL 375
Query: 407 -----------------AYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSI 449
YA +G +E + + + SG P S S AC + ++
Sbjct: 376 FDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVAL 435
Query: 450 KTGSEFFDLMAYYDVKPSLKHYTC--MVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALL 507
+TG++ L V + C ++ + + + A + ++ + D V W + L
Sbjct: 436 ETGTQVHSLAV--KVGCQFNSFACNALITMYGKCRNMEYARQVFSRM-VTKDIVSWNSFL 492
Query: 508 GGCVSHGNLEFGQIAADRLI 527
V + L+ + D ++
Sbjct: 493 AALVQNDLLDEARNTFDNML 512
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 113/229 (49%), Gaps = 6/229 (2%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKC +++ A++VF M +D VSWNS + A N L+ EA + M S D+ V
Sbjct: 463 MYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDD-----V 517
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ +I + EA+G M E PN+ L+ +L C L +G++ H
Sbjct: 518 SWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVA 577
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G S V N L+ +Y +CG + +IF ++ + NTII GY ++G EA
Sbjct: 578 IKLGMDSELIVANALISMYFKCG-CADSRRIFDLMEERDIFTWNTIITGYAQHGLGREAI 636
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEP 229
+++ ME GV +++ +++ L DE + F+ + G+ P
Sbjct: 637 KMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLTP 685
>gi|297851096|ref|XP_002893429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339271|gb|EFH69688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 790
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 213/643 (33%), Positives = 333/643 (51%), Gaps = 57/643 (8%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETP--- 57
+Y K LD A+++F + E D ++ ++V+ A+G + A E ETP
Sbjct: 58 VYCKSSELDYARQLFDEISEPDKIARTTMVSGYCASGDIALARSVFE-------ETPVSM 110
Query: 58 -NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARL---QKLSLG 113
+ V ++A+I GF+ N AI + +M+ EG +P+ T +SVL A + +K +
Sbjct: 111 RDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDDFTYASVLAGLALVVDDEKQCV- 169
Query: 114 KEFHGYITRNGFMSNPFVVNGLVDVYRRCGD----MLSALKIFSKFSIKNEVSCNTIIVG 169
+FH ++G V N LV VY RC + SA K+F K+E S T++ G
Sbjct: 170 -QFHAAALKSGAGYVTSVSNALVSVYSRCASSPSLLHSARKVFDDIPEKDERSWTTMMTG 228
Query: 170 YCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEP 229
Y +NG +EL M+ ++++N+MISGYV+ LY EA M R ++ GIE
Sbjct: 229 YVKNGCFDLGKELLKGMDE---NMKLVAYNAMISGYVNCGLYQEALEMVRRMV-SSGIEL 284
Query: 230 TSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCR----------- 278
FT+ SV+ ACA+ L+ GK++HA + S F +LV +Y +
Sbjct: 285 DEFTYPSVIRACANARLLQLGKQVHAYVLRREDFSFHF-DNSLVTLYYKCGKFNEARAIF 343
Query: 279 ----YQDLVA----------------AQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQ 318
+DLV+ A++ F E++ L + G N + ++
Sbjct: 344 EKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLK 403
Query: 319 LFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYA 378
LFS M P Y + +C+ L G+Q HA ++ G+DS + G AL+ MYA
Sbjct: 404 LFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQFHAQLVKIGFDSSLSAGNALITMYA 463
Query: 379 KCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLS 438
KCG ++ A+ ++ + D VS NA++ A HGHG E + + +L G RPD I+FL+
Sbjct: 464 KCGVVEEAQQVFRTMPCLDSVSWNALIAALGQHGHGVEAVDVYEEMLKKGIRPDRITFLT 523
Query: 439 ALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMA 497
L+AC HAG + G ++F+ M Y + P HY ++DLL R+G+ EA I+ +P
Sbjct: 524 VLTACSHAGLVDQGRKYFNSMETVYRIPPGADHYARLIDLLCRSGKFSEAESIIESLPFK 583
Query: 498 PDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTR 557
P + +W ALL GC HGN+E G IAAD+L L P + G Y++L+N++A G+W ++AR R
Sbjct: 584 PTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMYAATGQWEEVARVR 643
Query: 558 QKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTII 600
+ M+DR + K CSWIE ++H F D SH +E +Y +
Sbjct: 644 KLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYKYL 686
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 131/490 (26%), Positives = 219/490 (44%), Gaps = 75/490 (15%)
Query: 94 ARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFS 153
A L LP R L L + HG I GF + ++N L+DVY + ++ A ++F
Sbjct: 16 AANLRLCLPL--RRTSLQLARAVHGNIITFGFQPHAHILNRLIDVYCKSSELDYARQLFD 73
Query: 154 KFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDE 213
+ S ++++ T++ GYC +G++A AR +F+ E R + +N+MI+G+ N+
Sbjct: 74 EISEPDKIARTTMVSGYCASGDIALARSVFE--ETPVSMRDTVMYNAMITGFSHNNDGYS 131
Query: 214 AFSMFRDLLMRDGIEPTSFTFGSVLIACA-DMNSLRKGKEIHALAIALGLQSDTFVGGAL 272
A ++F + +G +P FT+ SVL A ++ ++ + HA A+ G T V AL
Sbjct: 132 AINLFCK-MKHEGFKPDDFTYASVLAGLALVVDDEKQCVQFHAAALKSGAGYVTSVSNAL 190
Query: 273 VEMYCRYQD----LVAAQMAFDEIENIENL----------------LGKMKEDGFEPN-- 310
V +Y R L +A+ FD+I + LGK G + N
Sbjct: 191 VSVYSRCASSPSLLHSARKVFDDIPEKDERSWTTMMTGYVKNGCFDLGKELLKGMDENMK 250
Query: 311 VYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHA 356
+ +NAM ++ M+S + D +T ++ AC++ ++ GKQVHA
Sbjct: 251 LVAYNAMISGYVNCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHA 310
Query: 357 YAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGH--- 413
Y +R D H +LV +Y KCG AR ++++ DLVS NA+L+ Y GH
Sbjct: 311 YVLR-REDFSFHFDNSLVTLYYKCGKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIGE 369
Query: 414 ----------------------------GKEGIAHFRRILASGFRPDHISFLSALSACVH 445
G+EG+ F + GF P +F A+ +C
Sbjct: 370 AKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAV 429
Query: 446 AGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGA 505
G+ G +F + SL ++ + ++ G + EA + + +P DSV W A
Sbjct: 430 LGAYCNGQQFHAQLVKIGFDSSLSAGNALITMYAKCGVVEEAQQVFRTMPCL-DSVSWNA 488
Query: 506 LLGGCVSHGN 515
L+ HG+
Sbjct: 489 LIAALGQHGH 498
>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
Length = 1020
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 197/602 (32%), Positives = 307/602 (50%), Gaps = 73/602 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGS D ++VF+ + RD L+
Sbjct: 389 MYAKCGSYKDCRQVFEKLVNRD------------------------------------LI 412
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+ +IGG + G EEA + +MQ EG+ PN T +L AC L G+E H +
Sbjct: 413 AWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRV 472
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
++GFM + V N L+ +Y RCG + A +F+K K+ +S +I G ++G AEA
Sbjct: 473 VKDGFMFDISVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEAL 532
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+F M+ + G++P T+ S+L A
Sbjct: 533 AVFQDMQ------------------------------------QAGLKPNRVTYTSILNA 556
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C+ +L G+ IH I GL +D V LV MY + A+ FD + + +
Sbjct: 557 CSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDIVAY 616
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G+ + A++LF + L PD T +L+AC++ ++E K++H+ ++
Sbjct: 617 NAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAKEIHSLVLK 676
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
GY SD +G ALV YAKCGS A L + ++ +++S NA++ A HG G++ +
Sbjct: 677 DGYLSDTSLGNALVSTYAKCGSFSDALLVFDKMMKRNVISWNAIIGGCAQHGRGQDVLQL 736
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLS 479
F R+ G +PD ++F+S LSAC HAG ++ G +F M+ + + P+++HY CMVDLL
Sbjct: 737 FERMKMEGIKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSRDFGITPTIEHYGCMVDLLG 796
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
RAG+L E IK +P ++ +WGALLG C HGN+ + AA+ ++L+P+N YV
Sbjct: 797 RAGQLDEVEALIKTMPFQANTRIWGALLGACRIHGNVPVAERAAESSLKLDPDNAAVYVA 856
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTI 599
L++++A AG W A+ R+ M+ R + K PG SWIE D++H F A DRSH SE+IY
Sbjct: 857 LSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRSWIEVGDKLHYFVAEDRSHPESEKIYAE 916
Query: 600 ID 601
+D
Sbjct: 917 LD 918
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 149/579 (25%), Positives = 254/579 (43%), Gaps = 100/579 (17%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +CGS+++A++V WN L++ +
Sbjct: 185 MYIQCGSIEEARQV-----------WNK-----------------------LNHTERTVH 210
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A++ G+ Q GY EEA+ +L MQ GL T +L +C L G+E H
Sbjct: 211 SWNAMVVGYVQYGYIEEALKLLREMQQHGLALGRATTMRLLSSCKSPSALECGREIHVEA 270
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ + + V N ++++Y +CG + A ++F K K+ VS II GY + G+ A
Sbjct: 271 MKARLLFDVNVANCILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYADCGHSEIAF 330
Query: 181 ELFDQMEHLGVQRGIIS---------------WNSMISGYVDNS---------------- 209
E+F +M+ GV I+ W + ++ N+
Sbjct: 331 EIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTALVKMY 390
Query: 210 ----LYDEAFSMFRDLLMRD------------------------------GIEPTSFTFG 235
Y + +F L+ RD G+ P T+
Sbjct: 391 AKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYV 450
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
+L AC + +L G+EIH+ + G D V AL+ MY R + A++ F+++
Sbjct: 451 ILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLLFNKMVRK 510
Query: 296 ENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVH 355
+ + G + A+ +F +M L P+ T IL+ACSS A ++ G+++H
Sbjct: 511 DIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIH 570
Query: 356 AYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGK 415
I G +D H+ LV+MY+ CGS+K AR + R++ D+V+ NAM+ YA H GK
Sbjct: 571 QQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAMIGGYAAHNLGK 630
Query: 416 EGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMV 475
E + F R+ G +PD +++++ L+AC ++GS++ E L+ +V
Sbjct: 631 EALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAKEIHSLVLKDGYLSDTSLGNALV 690
Query: 476 DLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
++ G +A K+ M + + W A++GGC HG
Sbjct: 691 STYAKCGSFSDALLVFDKM-MKRNVISWNAIIGGCAQHG 728
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 124/523 (23%), Positives = 247/523 (47%), Gaps = 69/523 (13%)
Query: 76 EEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGL 135
+ A+ ++ +Q +G N+ +L C ++ L G+E H +I ++ + + + VN L
Sbjct: 123 DRAMDVVQYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNAL 182
Query: 136 VDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGI 195
+++Y +C G++ EAR++++++ H +R +
Sbjct: 183 INMYIQC-------------------------------GSIEEARQVWNKLNH--TERTV 209
Query: 196 ISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHA 255
SWN+M+ GYV +EA + R++ + G+ T +L +C ++L G+EIH
Sbjct: 210 HSWNAMVVGYVQYGYIEEALKLLREM-QQHGLALGRATTMRLLSSCKSPSALECGREIHV 268
Query: 256 LAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWN 315
A+ L D V ++ MY + + A+ FD++E + + G+ ++
Sbjct: 269 EAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYADCGHSEI 328
Query: 316 AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVD 375
A ++F +M + P+ T +L+A S A ++ GK VH++ + G++SD+ +GTALV
Sbjct: 329 AFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTALVK 388
Query: 376 MYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHIS 435
MYAKCGS K R ++++ DL++ N M+ A G+ +E + ++ G P+ I+
Sbjct: 389 MYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKIT 448
Query: 436 FLSALSACVHAGSIKTGSEF----------FD------LMAYYD---------------V 464
++ L+ACV+ ++ G E FD L++ Y V
Sbjct: 449 YVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLLFNKMV 508
Query: 465 KPSLKHYTCMVDLLSRAGELGEA---YEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQI 521
+ + +T M+ L+++G EA ++ +++ + P+ V + ++L C S L++G+
Sbjct: 509 RKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRR 568
Query: 522 AADRLIELEPNNTGNYV-MLANLFAYAGRWSDLARTRQKMKDR 563
++IE + L N+++ G D + +M R
Sbjct: 569 IHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQR 611
>gi|225459793|ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33680
[Vitis vinifera]
gi|302141693|emb|CBI18896.3| unnamed protein product [Vitis vinifera]
Length = 703
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 195/599 (32%), Positives = 310/599 (51%), Gaps = 73/599 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G +A+KVF MPER N V
Sbjct: 152 MYCKAGLTPEARKVFDTMPER------------------------------------NSV 175
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ +I G+ EA+G+ M+ E N +SVL A + ++ GK+ H
Sbjct: 176 SWATMISGYASQKLAAEALGLFRLMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIA 235
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+NG +S V N LV +Y +CG + AL+ F S KN
Sbjct: 236 VKNGLLSIVSVGNALVTMYAKCGSLDDALQTFETSSDKNS-------------------- 275
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
I+W++MI+GY + D+A +F + + GI P+ FTF V+ A
Sbjct: 276 ---------------ITWSAMITGYAQSGDSDKALKLFSSMHL-SGIRPSEFTFVGVINA 319
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C+D+ + +GK++H + LG +S +V ALV+MY + +V A+ FD ++ + +L
Sbjct: 320 CSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDARKGFDYLQEPDIVLW 379
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G+ N +A+ L+ M + P+ T+ +L ACSSLA +E+GKQ+HA ++
Sbjct: 380 TSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIHARTVK 439
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
G+ +V IG+AL MYAKCG LK L ++R+ D++S NAM++ + +G GKE +
Sbjct: 440 YGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMISGLSQNGCGKEALEL 499
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMVDLLS 479
F + G +PD+++F++ LSAC H G ++ G +F +M + + P ++HY CMVD+LS
Sbjct: 500 FEEMQLEGTKPDYVTFVNILSACSHMGLVERGWGYFRMMFDEFGMDPRVEHYACMVDILS 559
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
RAG+L EA EF + + +W +LG C ++ N E G A ++L+EL + YV+
Sbjct: 560 RAGKLKEAIEFTESATIDHGMCLWRIILGACRNYRNYELGAYAGEKLMELGSQESSAYVL 619
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYT 598
L+++++ GRW D+ R R+ MK R + K PGCSWIE + +H F D+ H + +I+
Sbjct: 620 LSSIYSALGRWEDVERVRRMMKLRGVSKEPGCSWIELKSGVHVFVVKDQMHPQIGDIHV 678
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 144/522 (27%), Positives = 243/522 (46%), Gaps = 48/522 (9%)
Query: 27 NSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYD--EEAIGMLFR 84
NS+V A + EA ER+ + D +VSW+ +I G++Q+G + + R
Sbjct: 44 NSLVNLYAKCQRLREAKFVFERIQNKD-----VVSWNCIINGYSQHGPSGSSHVMELFQR 98
Query: 85 MQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGD 144
M+AE PNA T + V A + L + G+ H + + FV + L+++Y
Sbjct: 99 MRAENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIKMDSCRDVFVGSSLMNMY----- 153
Query: 145 MLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISG 204
C+ G EAR++FD M +R +SW +MISG
Sbjct: 154 --------------------------CKAGLTPEARKVFDTMP----ERNSVSWATMISG 183
Query: 205 YVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQS 264
Y L EA +FR L+ R+ F F SVL A + GK+IH +A+ GL S
Sbjct: 184 YASQKLAAEALGLFR-LMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLS 242
Query: 265 DTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEML 324
VG ALV MY + L A F+ + ++ G+ + + A++LFS M
Sbjct: 243 IVSVGNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMITGYAQSGDSDKALKLFSSMH 302
Query: 325 SLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLK 384
+ P +T +++ACS L GKQVH Y ++ G++S +++ TALVDMYAKC S+
Sbjct: 303 LSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIV 362
Query: 385 HARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACV 444
AR + + PD+V +M+ Y +G ++ ++ + R+ G P+ ++ S L AC
Sbjct: 363 DARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACS 422
Query: 445 HAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWG 504
+++ G + Y + + + + ++ G L + +++P A D + W
Sbjct: 423 SLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMP-ARDVISWN 481
Query: 505 ALLGGCVSHGNLEFGQIAADRLIELEPNNTG-NYVMLANLFA 545
A++ G +G G+ A + E++ T +YV N+ +
Sbjct: 482 AMISGLSQNG---CGKEALELFEEMQLEGTKPDYVTFVNILS 520
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/430 (24%), Positives = 195/430 (45%), Gaps = 44/430 (10%)
Query: 92 PNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKI 151
P+ R+ + L + L GK H I ++ S ++ N LV++Y +C
Sbjct: 4 PSNRSFFTALLQYTHNRSLQKGKALHAQIIKSS-SSCVYIANSLVNLYAKCQ-------- 54
Query: 152 FSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLY 211
+ EA+ +F+++++ + ++SWN +I+GY +
Sbjct: 55 -----------------------RLREAKFVFERIQN----KDVVSWNCIINGYSQHGPS 87
Query: 212 DEAFSMFRDLLMR-DGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGG 270
+ M MR + P + TF V A + + G+ HA+AI + D FVG
Sbjct: 88 GSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIKMDSCRDVFVGS 147
Query: 271 ALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTP 330
+L+ MYC+ A+ FD + ++ G+ A+ LF M +
Sbjct: 148 SLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQKLAAEALGLFRLMRREEEGE 207
Query: 331 DIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAY 390
+ + +LSA + + GKQ+H A++ G S V +G ALV MYAKCGSL A +
Sbjct: 208 NEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKCGSLDDALQTF 267
Query: 391 KRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIK 450
+ S + ++ +AM+T YA G + + F + SG RP +F+ ++AC G+
Sbjct: 268 ETSSDKNSITWSAMITGYAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINACSDLGAAW 327
Query: 451 TGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEA---YEFIKKIPMAPDSVMWGALL 507
G + D + + + T +VD+ ++ + +A ++++++ PD V+W +++
Sbjct: 328 EGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDARKGFDYLQE----PDIVLWTSMI 383
Query: 508 GGCVSHGNLE 517
GG V +G E
Sbjct: 384 GGYVQNGENE 393
>gi|224103989|ref|XP_002313273.1| predicted protein [Populus trichocarpa]
gi|222849681|gb|EEE87228.1| predicted protein [Populus trichocarpa]
Length = 680
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 208/653 (31%), Positives = 321/653 (49%), Gaps = 103/653 (15%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNS--------------------------------- 28
YG CG L D K+VF M ERD VSWNS
Sbjct: 52 YGNCGGLKDVKRVFDEMLERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVS 111
Query: 29 ---VVTACAA--NGLVLEALECLERMSSLDNETP-------------------------- 57
V+ CA +G+ + C + LD++
Sbjct: 112 IVSVLPVCAGLEDGVTGRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEIS 171
Query: 58 --NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKE 115
N VSW+A+I +++A+ M M G++PN+ T SS+LP L+ GKE
Sbjct: 172 ERNGVSWNAIITSLAYLERNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKE 231
Query: 116 FHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGN 175
HG+ R G S+ FV N L+D+Y + G L
Sbjct: 232 IHGFSLRFGLESDIFVANALIDMYAKSGRSL----------------------------- 262
Query: 176 VAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFG 235
+A +F+Q+ ++ I+SWN+M++ + N L A + R + DG P S TF
Sbjct: 263 --QASNVFNQIG----EKNIVSWNAMVANFAQNRLELAAVDLVRQM-QADGEIPNSVTFT 315
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
+VL ACA + LR GKEIHA AI G D FV AL +MY + L A+ F +I
Sbjct: 316 NVLPACARIGFLRPGKEIHARAIRTGSSVDLFVSNALTDMYAKCGCLNLARRVF-KISLR 374
Query: 296 ENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVH 355
+ + + G+ +++LF EM + D+ + ++SAC++LA +++GK+VH
Sbjct: 375 DEVSYNILIIGYSQTTNCSESLRLFLEMGIKGMKLDVVSYMGVISACANLAALKQGKEVH 434
Query: 356 AYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGK 415
A+R + + I AL+D Y KCG + A +++I + D S N+M+ Y M G
Sbjct: 435 GLAVRKHLHTHLFIANALLDFYIKCGRIDLAGKVFRQIPSRDTASWNSMILGYGMLGELT 494
Query: 416 EGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMV 475
I F + G D +S+++ LSAC H G ++ G ++F+ M ++KP+ HY CMV
Sbjct: 495 IAINLFEAMKEDGVEYDSVSYIAVLSACSHGGLVEEGKKYFEHMQVQNIKPTQMHYACMV 554
Query: 476 DLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTG 535
DLL RAG + EA + I+ +P+ PD+ +WGALLG C HG +E AA+ L +L+P ++G
Sbjct: 555 DLLGRAGLIEEAVKLIESLPIEPDANVWGALLGACRIHGYIELAHWAAEHLFKLKPQHSG 614
Query: 536 NYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDR 588
Y +L+N++A AG+W + + R+ MK R K+PGCSW++ +++H F A +R
Sbjct: 615 YYSVLSNMYAEAGKWDEANQVRKLMKSRGAKKNPGCSWVQIDNQVHAFVAGER 667
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 136/502 (27%), Positives = 221/502 (44%), Gaps = 98/502 (19%)
Query: 89 GLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSA 148
G+ + T VL ACA + G+E HG + + GF S+ FV N L+ Y CG +
Sbjct: 2 GVRLDDHTFPFVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDV 61
Query: 149 LKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQME--------------------- 187
++F + ++ VS N++I + +G AEA LF +M
Sbjct: 62 KRVFDEMLERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAG 121
Query: 188 ---------------HLGVQRGIISWNSMIS-----GYVDNS--LYDE------------ 213
G+ + N+++ GYV +S ++DE
Sbjct: 122 LEDGVTGRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWNAI 181
Query: 214 ------------AFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALG 261
A MFR L++ G++P S TF S+L ++ GKEIH ++ G
Sbjct: 182 ITSLAYLERNQDALEMFR-LMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSLRFG 240
Query: 262 LQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAM---- 317
L+SD FV AL++MY + + A F++I E N+ +WNAM
Sbjct: 241 LESDIFVANALIDMYAKSGRSLQASNVFNQIG--------------EKNIVSWNAMVANF 286
Query: 318 -QLFSEMLSLDLT---------PDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDV 367
Q E+ ++DL P+ T +L AC+ + + GK++HA AIR G D+
Sbjct: 287 AQNRLELAAVDLVRQMQADGEIPNSVTFTNVLPACARIGFLRPGKEIHARAIRTGSSVDL 346
Query: 368 HIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILAS 427
+ AL DMYAKCG L AR +K IS D VS N ++ Y+ + E + F +
Sbjct: 347 FVSNALTDMYAKCGCLNLARRVFK-ISLRDEVSYNILIIGYSQTTNCSESLRLFLEMGIK 405
Query: 428 GFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEA 487
G + D +S++ +SAC + ++K G E L + L ++D + G + A
Sbjct: 406 GMKLDVVSYMGVISACANLAALKQGKEVHGLAVRKHLHTHLFIANALLDFYIKCGRIDLA 465
Query: 488 YEFIKKIPMAPDSVMWGALLGG 509
+ ++IP + D+ W +++ G
Sbjct: 466 GKVFRQIP-SRDTASWNSMILG 486
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 119/443 (26%), Positives = 195/443 (44%), Gaps = 78/443 (17%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G A VF + E++ VSWN++V A N L L A++ + +M + D E PN V
Sbjct: 254 MYAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQNRLELAAVDLVRQMQA-DGEIPNSV 312
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
T ++VLPACAR+ L GKE H
Sbjct: 313 -----------------------------------TFTNVLPACARIGFLRPGKEIHARA 337
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R G + FV N L D+Y +CG + A ++F K S+++EVS N +I+GY + N +E+
Sbjct: 338 IRTGSSVDLFVSNALTDMYAKCGCLNLARRVF-KISLRDEVSYNILIIGYSQTTNCSESL 396
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LF +M G++ ++S+ +IS A
Sbjct: 397 RLFLEMGIKGMKLDVVSYMGVIS------------------------------------A 420
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA++ +L++GKE+H LA+ L + F+ AL++ Y + + A F +I + +
Sbjct: 421 CANLAALKQGKEVHGLAVRKHLHTHLFIANALLDFYIKCGRIDLAGKVFRQIPSRDTASW 480
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAY-AI 359
G+ A+ LF M + D + +LSACS +E GK+ + +
Sbjct: 481 NSMILGYGMLGELTIAINLFEAMKEDGVEYDSVSYIAVLSACSHGGLVEEGKKYFEHMQV 540
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHA-RLAYKRISTPDLVSQNAMLTAYAMHGHGKEGI 418
+ + +H +VD+ + G ++ A +L PD A+L A +HG+ + +
Sbjct: 541 QNIKPTQMHY-ACMVDLLGRAGLIEEAVKLIESLPIEPDANVWGALLGACRIHGYIE--L 597
Query: 419 AHFRRILASGFRPDHISFLSALS 441
AH+ +P H + S LS
Sbjct: 598 AHWAAEHLFKLKPQHSGYYSVLS 620
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 154/330 (46%), Gaps = 14/330 (4%)
Query: 226 GIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAA 285
G+ TF VL ACAD S++KG+EIH + LG SD FVG L+ Y L
Sbjct: 2 GVRLDDHTFPFVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDV 61
Query: 286 QMAFDE-----IENIENLLGKMKEDGFEPNVYTWNAMQLFSEM-LSLDLTPDIYTVGIIL 339
+ FDE + + +++G GF A+ LF EM L P++ ++ +L
Sbjct: 62 KRVFDEMLERDVVSWNSVIGVFSVHGFYAE-----AIHLFCEMNLRSGFRPNMVSIVSVL 116
Query: 340 SACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLV 399
C+ L G+Q+H Y ++ G DS V +G ALVD+Y KCG +K +R + IS + V
Sbjct: 117 PVCAGLEDGVTGRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGV 176
Query: 400 SQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM 459
S NA++T+ A ++ + FR ++ G +P+ ++F S L V G E
Sbjct: 177 SWNAIITSLAYLERNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFS 236
Query: 460 AYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFG 519
+ ++ + ++D+ +++G +A +I + V W A++ + LE
Sbjct: 237 LRFGLESDIFVANALIDMYAKSGRSLQASNVFNQIG-EKNIVSWNAMVAN-FAQNRLELA 294
Query: 520 QIAADRLIELEPNNTGNYVMLANLFAYAGR 549
+ R ++ + N V N+ R
Sbjct: 295 AVDLVRQMQAD-GEIPNSVTFTNVLPACAR 323
>gi|449453226|ref|XP_004144359.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 192/602 (31%), Positives = 325/602 (53%), Gaps = 28/602 (4%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y + G ++ A+ VF M +++ +SWNS+V N EA ++MS N +S
Sbjct: 108 YSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMSE-----RNTIS 162
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W+ ++ G+ NG EA + RM E N + ++++ + +S + +
Sbjct: 163 WNGLVSGYINNGMINEAREVFDRMP----ERNVVSWTAMVRGYVKEGMISEAETLFWQMP 218
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
+S ++ GL+ G + A ++F K+ V+ +I GYC+ G + EAR
Sbjct: 219 EKNVVSWTVMLGGLLQE----GRIDEACRLFDMMPEKDVVTRTNMIGGYCQVGRLVEARM 274
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
LFD+M +R ++SW +MI+GYV N D A +F + ++ + T+ G C
Sbjct: 275 LFDEMP----RRNVVSWTTMITGYVQNQQVDIARKLFEVMPEKNEVSWTAMLKG--YTNC 328
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK 301
++ E L A+ ++S A++ + + ++ A+ FD++ +
Sbjct: 329 GRLD------EASELFNAMPIKS-VVACNAMILCFGQNGEVPKARQVFDQMREKDEGTWS 381
Query: 302 MKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRC 361
+E +A++LF M + P+ ++ +LS C+ LA ++ G+++HA +R
Sbjct: 382 AMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRS 441
Query: 362 GYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHF 421
+D DV++ + L+ MY KCG+L A+ + R + D+V N+++T YA HG G E + F
Sbjct: 442 QFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVF 501
Query: 422 RRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMVDLLSR 480
+ SG PD ++F+ LSAC + G++K G E F+ M Y V+ ++HY CMVDLL R
Sbjct: 502 HDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGR 561
Query: 481 AGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVML 540
AG+L EA + I+K+PM D+++WGALLG C +H L+ ++AA +L+ LEP N G +++L
Sbjct: 562 AGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILL 621
Query: 541 ANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRS-HDRSEEIYTI 599
+N++A GRW D+A R+ M+DRR+ K PGCSWI ++HKF D S H EI I
Sbjct: 622 SNIYASQGRWDDVAELRRNMRDRRVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRI 681
Query: 600 ID 601
++
Sbjct: 682 LE 683
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 97/419 (23%), Positives = 181/419 (43%), Gaps = 43/419 (10%)
Query: 123 NGFMSNPFVV--NGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
N F + F++ N L+ Y R G + A +F + KN +S N+I+ GY +N EA+
Sbjct: 90 NRFYCSNFIISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQ 149
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV--- 237
+FD+M +R ISWN ++SGY++N + +EA +F + R+ + T+ G V
Sbjct: 150 NMFDKMS----ERNTISWNGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEG 205
Query: 238 LIACADMNSLR-KGKEIHALAIALG------------------LQSDTFVGGALVEMYCR 278
+I+ A+ + K + + + LG + D ++ YC+
Sbjct: 206 MISEAETLFWQMPEKNVVSWTVMLGGLLQEGRIDEACRLFDMMPEKDVVTRTNMIGGYCQ 265
Query: 279 YQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVG-- 336
LV A+M FDE+ + G+ N A +LF M P+ V
Sbjct: 266 VGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVM------PEKNEVSWT 319
Query: 337 IILSACSSLATMERGKQV-HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST 395
+L ++ ++ ++ +A I+ V A++ + + G + AR + ++
Sbjct: 320 AMLKGYTNCGRLDEASELFNAMPIK-----SVVACNAMILCFGQNGEVPKARQVFDQMRE 374
Query: 396 PDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEF 455
D + +AM+ Y G + + FR + G RP+ S +S LS C ++ G E
Sbjct: 375 KDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREI 434
Query: 456 FDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
+ + + ++ + + G L +A + + + D VMW +++ G HG
Sbjct: 435 HAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVK-DVVMWNSIITGYAQHG 492
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG+L AK+VF +D V WNS++T A +GL +EAL M P+ V
Sbjct: 456 MYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDM-HFSGIMPDDV 514
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE 88
++ V+ + G ++ + + M+ +
Sbjct: 515 TFVGVLSACSYTGNVKKGLEIFNSMETK 542
>gi|357165485|ref|XP_003580399.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 886
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 200/634 (31%), Positives = 329/634 (51%), Gaps = 74/634 (11%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
M +CG++D A K F + + NS++ A + V ALE + M D +V
Sbjct: 203 MLVRCGAMDFASKQFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERD-----VV 257
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ VI +++G EA+ M+ M +G+ P++ T +S L ACARL L GK+ H +
Sbjct: 258 SWNMVISALSKSGRVREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQV 317
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
RN +P+V + +V++Y +CG A ++FS +N VS +I G+ + G +E+
Sbjct: 318 IRNLPHIDPYVASAMVELYAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESV 377
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
ELF+QM +L+ D F +++
Sbjct: 378 ELFNQMR-------------------------------AELMAVD-----QFALATLISG 401
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL-- 298
C + + G ++H+L + G V +L+ MY + +L A++ F+ + + +
Sbjct: 402 CCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIFNFMAERDIVSW 461
Query: 299 ------------LGKMKE---DGFEPNVYTWNAM--------------QLFSEMLS-LDL 328
+ K +E D NV TWNAM +++S+ML+ D+
Sbjct: 462 TGMITAYSQVGNIAKAREFFDDMSTRNVITWNAMLGAYIQHGAEEDGLKMYSDMLTEKDV 521
Query: 329 TPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARL 388
PD T + C+ + + G Q+ + ++ G D + A++ MY+KCG + AR
Sbjct: 522 IPDWVTYVTLFRGCADIGANKLGDQIIGHTVKVGLILDTSVVNAVITMYSKCGRISEARK 581
Query: 389 AYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGS 448
A+ +S DLVS NAM+T Y+ HG GK+ I F IL G +PD+IS+++ LS C H+G
Sbjct: 582 AFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDILNKGAKPDYISYVAVLSGCSHSGL 641
Query: 449 IKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALL 507
++ G +FD+M +++ P L+H++CMVDLL RAG L EA I ++PM P + +WGALL
Sbjct: 642 VEEGKFYFDMMKRDHNISPGLEHFSCMVDLLGRAGHLIEAKNLIDEMPMKPTAEVWGALL 701
Query: 508 GGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHK 567
C +HGN + ++AA L +L+ +G Y++LA ++A AG+ D A+ R+ M+D+ + K
Sbjct: 702 SACKTHGNNDLAELAAKHLFDLDSPGSGGYMLLAKMYADAGKSDDSAQVRKLMRDKGIKK 761
Query: 568 SPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
SPG SW+E + +H F+A D SH + I +D
Sbjct: 762 SPGYSWMEVNNRVHVFKAEDVSHPQVIAIREKLD 795
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 138/548 (25%), Positives = 243/548 (44%), Gaps = 79/548 (14%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y K GSL DA ++F MP RD SWN++++ +G L AL+ M + PN +
Sbjct: 102 YAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFVSMRQTGDSLPNAFT 161
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
+ V+ G+ E A+ +L G ++
Sbjct: 162 FGCVMKSCGALGWHEVALQLL-----------------------------------GLLS 186
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
+ +P V LVD+ RCG M A K FS+ + N+++VGY ++ V A E
Sbjct: 187 KFDSQDDPDVQTALVDMLVRCGAMDFASKQFSRIKNPTIICRNSMLVGYAKSHGVDHALE 246
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
+F M +R ++SWN +IS + EA M D+ + G+ P S T+ S L AC
Sbjct: 247 IFKSMP----ERDVVSWNMVISALSKSGRVREALDMVVDMHGK-GVRPDSTTYTSSLTAC 301
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK 301
A ++SL GK++H I D +V A+VE+Y + A+ F + + ++
Sbjct: 302 ARLSSLEWGKQLHVQVIRNLPHIDPYVASAMVELYAKCGCFKEAKRVFSSLRDRNSVSWT 361
Query: 302 MKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRC 361
+ GF +++LF++M + + D + + ++S C + + G Q+H+ ++
Sbjct: 362 VLIGGFLQYGCFSESVELFNQMRAELMAVDQFALATLISGCCNTMDICLGSQLHSLCLKS 421
Query: 362 GYDSDVHIGTALVDMYAKCGSLKHARL------------------AYKRI---------- 393
G+ V + +L+ MYAKCG+L++A L AY ++
Sbjct: 422 GHTRAVVVSNSLISMYAKCGNLQNAELIFNFMAERDIVSWTGMITAYSQVGNIAKAREFF 481
Query: 394 ---STPDLVSQNAMLTAYAMHGHGKEGIAHFRRILA-SGFRPDHISFLSALSACVHAGSI 449
ST ++++ NAML AY HG ++G+ + +L PD +++++ C G+
Sbjct: 482 DDMSTRNVITWNAMLGAYIQHGAEEDGLKMYSDMLTEKDVIPDWVTYVTLFRGCADIGAN 541
Query: 450 KTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGE---AYEFIKKIPMAPDSVMWGAL 506
K G + + ++ + S+ G + E A++F+ + D V W A+
Sbjct: 542 KLGDQIIGHTVKVGLILDTSVVNAVITMYSKCGRISEARKAFDFLSR----KDLVSWNAM 597
Query: 507 LGGCVSHG 514
+ G HG
Sbjct: 598 ITGYSQHG 605
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 121/502 (24%), Positives = 210/502 (41%), Gaps = 77/502 (15%)
Query: 95 RTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIF-S 153
+ L+ L +C L+ + H + G S F+ N L+ Y CG + A +
Sbjct: 26 QALADALRSCGARSALTGARTLHSRLINVGLASVVFLQNTLLHAYLSCGALSDARNLLRD 85
Query: 154 KFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDE 213
+ + N ++ N ++ GY + G++++A ELF +M R + SWN+++SGY + +
Sbjct: 86 EITEPNVITHNIMMNGYAKLGSLSDAVELFGRMP----TRDVASWNTIMSGYYQSGQFLN 141
Query: 214 AFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALV 273
A +F + P +FTFG V+ +C + ++ L Q D V ALV
Sbjct: 142 ALDIFVSMRQTGDSLPNAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALV 201
Query: 274 EMYCRYQDLVAAQMAFDEIENI------ENLLGKMKEDGF-----------EPNVYTWN- 315
+M R + A F I+N L+G K G E +V +WN
Sbjct: 202 DMLVRCGAMDFASKQFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNM 261
Query: 316 -------------AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCG 362
A+ + +M + PD T L+AC+ L+++E GKQ+H IR
Sbjct: 262 VISALSKSGRVREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNL 321
Query: 363 YDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFR 422
D ++ +A+V++YAKCG K A+ + + + VS ++ + +G E + F
Sbjct: 322 PHIDPYVASAMVELYAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFN 381
Query: 423 RILASGFRPDHISFLSALSACVHAGSIKTGSEF--------------------------- 455
++ A D + + +S C + I GS+
Sbjct: 382 QMRAELMAVDQFALATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCG 441
Query: 456 --------FDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALL 507
F+ MA D+ +T M+ S+ G + +A EF + + + W A+L
Sbjct: 442 NLQNAELIFNFMAERDIVS----WTGMITAYSQVGNIAKAREFFDDMS-TRNVITWNAML 496
Query: 508 GGCVSHGNLEFG-QIAADRLIE 528
G + HG E G ++ +D L E
Sbjct: 497 GAYIQHGAEEDGLKMYSDMLTE 518
>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 868
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 209/635 (32%), Positives = 310/635 (48%), Gaps = 111/635 (17%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG + A +VF M ER N+V
Sbjct: 201 MYSKCGEISVACEVFHKMTER------------------------------------NVV 224
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A+I Q+ EA + +M G+ PNA T S+L +C + L+ G+ H +I
Sbjct: 225 SWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHI 284
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G ++ V N L+ +Y C+ +V EAR
Sbjct: 285 SERGLETDMIVANALITMY-------------------------------CKCNSVQEAR 313
Query: 181 ELFDQMEHLGVQRGIISWNSMI-----SGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFG 235
E+FD+M +R +ISW++MI SGY D DE F + + + R+G+ P TF
Sbjct: 314 EIFDRMS----KRDVISWSAMIAGYAQSGYKDKESIDEVFQLL-ERMRREGVFPNKVTFM 368
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
S+L AC +L +G++IHA +G + D + A+ MY + + A+ F ++ N
Sbjct: 369 SILRACTAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMAN- 427
Query: 296 ENLLG------------------KMKEDGFEPNVYTWNAM--------------QLFSEM 323
+N++ K+ + NV +WN M +L S M
Sbjct: 428 KNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSM 487
Query: 324 LSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSL 383
+ PD TV IL AC +LA +ERGK VHA A++ G +SD + T+L+ MY+KCG +
Sbjct: 488 KAEGFQPDRVTVITILEACGALAGLERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGQV 547
Query: 384 KHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSAC 443
AR + ++S D V+ NAML Y HG G E + F+R+L P+ I+ + +SAC
Sbjct: 548 AEARTVFDKMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKRMLKERVSPNEITLTAVISAC 607
Query: 444 VHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVM 502
AG ++ G E F +M + + P +HY CMVDLL RAG L EA EFI+ +P PD +
Sbjct: 608 SRAGLVQEGREIFRMMQEDFKMTPRKQHYGCMVDLLGRAGRLQEAEEFIQSMPCEPDISV 667
Query: 503 WGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKD 562
W ALLG C SH N++ + AA ++ELEP+ Y+ L+N++A AGRW D + R+ M D
Sbjct: 668 WHALLGACKSHNNVQLAERAAHHILELEPSYASVYITLSNIYAQAGRWDDSTKVRRVMDD 727
Query: 563 RRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
R + K G S IE IH F A D +H + I+
Sbjct: 728 RGLKKDRGESSIEIDGRIHTFVAEDCAHPEIDAIH 762
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 116/477 (24%), Positives = 224/477 (46%), Gaps = 74/477 (15%)
Query: 63 SAVIGG----FTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHG 118
++V GG + G EAI +L ++ GL N+ T V+ CA+ ++ GK H
Sbjct: 21 TSVSGGEVWRLCKAGRLREAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHK 80
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
+ G + ++ N L++ Y + D+ SA ++F + ++++ V+ +++I Y N + A+
Sbjct: 81 QLDELGVEIDIYLGNSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAK 140
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
A + F++M IEP TF S+L
Sbjct: 141 AFDTFERMTDA------------------------------------NIEPNRITFLSIL 164
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
AC + + L KG++IH + A+G+++D V AL+ MY + ++ A F ++
Sbjct: 165 KACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEVFHKMT----- 219
Query: 299 LGKMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSS 344
E NV +W A+ +L+ +ML ++P+ T +L++C++
Sbjct: 220 ---------ERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNT 270
Query: 345 LATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAM 404
+ RG+++H++ G ++D+ + AL+ MY KC S++ AR + R+S D++S +AM
Sbjct: 271 PEALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAM 330
Query: 405 LTAYAMHGHG-KEGIAH----FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM 459
+ YA G+ KE I R+ G P+ ++F+S L AC G+++ G + +
Sbjct: 331 IAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAEL 390
Query: 460 AYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNL 516
+ + T + ++ ++ G + EA + K+ + V W + L + G+L
Sbjct: 391 SKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMA-NKNVVAWTSFLSMYIKCGDL 446
>gi|449488311|ref|XP_004157997.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 192/602 (31%), Positives = 325/602 (53%), Gaps = 28/602 (4%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y + G ++ A+ VF M +++ +SWNS+V N EA ++MS N +S
Sbjct: 108 YSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMSE-----RNTIS 162
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W+ ++ G+ NG EA + RM E N + ++++ + +S + +
Sbjct: 163 WNGLVSGYINNGMINEAREVFDRMP----ERNVVSWTAMVRGYVKEGMISEAETLFWQMP 218
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
+S ++ GL+ G + A ++F K+ V+ +I GYC+ G + EAR
Sbjct: 219 EKNVVSWTVMLGGLLQE----GRIDEACRLFDMMPEKDVVTRTNMIGGYCQVGRLVEARM 274
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
LFD+M +R ++SW +MI+GYV N D A +F + ++ + T+ G C
Sbjct: 275 LFDEMP----RRNVVSWTTMITGYVQNQQVDIARKLFEVMPEKNEVSWTAMLKG--YTNC 328
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK 301
++ E L A+ ++S A++ + + ++ A+ FD++ +
Sbjct: 329 GRLD------EASELFNAMPIKS-VVACNAMILCFGQNGEVPKARQVFDQMREKDEGTWS 381
Query: 302 MKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRC 361
+E +A++LF M + P+ ++ +LS C+ LA ++ G+++HA +R
Sbjct: 382 AMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRS 441
Query: 362 GYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHF 421
+D DV++ + L+ MY KCG+L A+ + R + D+V N+++T YA HG G E + F
Sbjct: 442 QFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVF 501
Query: 422 RRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMVDLLSR 480
+ SG PD ++F+ LSAC + G++K G E F+ M Y V+ ++HY CMVDLL R
Sbjct: 502 HDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGR 561
Query: 481 AGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVML 540
AG+L EA + I+K+PM D+++WGALLG C +H L+ ++AA +L+ LEP N G +++L
Sbjct: 562 AGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILL 621
Query: 541 ANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRS-HDRSEEIYTI 599
+N++A GRW D+A R+ M+DRR+ K PGCSWI ++HKF D S H EI I
Sbjct: 622 SNIYASQGRWDDVAELRRNMRDRRVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRI 681
Query: 600 ID 601
++
Sbjct: 682 LE 683
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 97/419 (23%), Positives = 181/419 (43%), Gaps = 43/419 (10%)
Query: 123 NGFMSNPFVV--NGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
N F + F++ N L+ Y R G + A +F + KN +S N+I+ GY +N EA+
Sbjct: 90 NRFYCSNFIISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQ 149
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV--- 237
+FD+M +R ISWN ++SGY++N + +EA +F + R+ + T+ G V
Sbjct: 150 NMFDKMS----ERNTISWNGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEG 205
Query: 238 LIACADMNSLR-KGKEIHALAIALG------------------LQSDTFVGGALVEMYCR 278
+I+ A+ + K + + + LG + D ++ YC+
Sbjct: 206 MISEAETLFWQMPEKNVVSWTVMLGGLLQEGRIDEACRLFDMMPEKDVVTRTNMIGGYCQ 265
Query: 279 YQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVG-- 336
LV A+M FDE+ + G+ N A +LF M P+ V
Sbjct: 266 VGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVM------PEKNEVSWT 319
Query: 337 IILSACSSLATMERGKQV-HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST 395
+L ++ ++ ++ +A I+ V A++ + + G + AR + ++
Sbjct: 320 AMLKGYTNCGRLDEASELFNAMPIK-----SVVACNAMILCFGQNGEVPKARQVFDQMRE 374
Query: 396 PDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEF 455
D + +AM+ Y G + + FR + G RP+ S +S LS C ++ G E
Sbjct: 375 KDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREI 434
Query: 456 FDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
+ + + ++ + + G L +A + + + D VMW +++ G HG
Sbjct: 435 HAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVK-DVVMWNSIITGYAQHG 492
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG+L AK+VF +D V WNS++T A +GL +EAL M P+ V
Sbjct: 456 MYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDM-HFSGIMPDDV 514
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE 88
++ V+ + G ++ + + M+ +
Sbjct: 515 TFVGVLSACSYTGNVKKGLEIFNSMETK 542
>gi|334185563|ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g23330
gi|11994318|dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana]
gi|332643232|gb|AEE76753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 715
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 176/552 (31%), Positives = 306/552 (55%), Gaps = 19/552 (3%)
Query: 55 ETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGK 114
++P +++W +VI FT +A+ M+A G P+ SVL +C + L G+
Sbjct: 66 KSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGE 125
Query: 115 EFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKF---------SIKNEVSCNT 165
HG+I R G + + N L+++Y + M S + + + F S +V T
Sbjct: 126 SVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAET 185
Query: 166 IIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRD 225
I+ + + R +F+ M ++ ++S+N++I+GY + +Y++A M R++ D
Sbjct: 186 CIMPF----GIDSVRRVFEVMP----RKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTD 237
Query: 226 GIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAA 285
++P SFT SVL ++ + KGKEIH I G+ SD ++G +LV+MY + + +
Sbjct: 238 -LKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDS 296
Query: 286 QMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSL 345
+ F + + + G+ N A++LF +M++ + P ++ AC+ L
Sbjct: 297 ERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHL 356
Query: 346 ATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAML 405
AT+ GKQ+H Y +R G+ S++ I +ALVDMY+KCG++K AR + R++ D VS A++
Sbjct: 357 ATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAII 416
Query: 406 TAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDV 464
+A+HGHG E ++ F + G +P+ ++F++ L+AC H G + +F+ M Y +
Sbjct: 417 MGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGL 476
Query: 465 KPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAAD 524
L+HY + DLL RAG+L EAY FI K+ + P +W LL C H NLE + A+
Sbjct: 477 NQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAE 536
Query: 525 RLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFR 584
++ ++ N G YV++ N++A GRW ++A+ R +M+ + + K P CSWIE +++ H F
Sbjct: 537 KIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFV 596
Query: 585 ASDRSHDRSEEI 596
+ DRSH ++I
Sbjct: 597 SGDRSHPSMDKI 608
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 92/380 (24%), Positives = 168/380 (44%), Gaps = 73/380 (19%)
Query: 8 LDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIG 67
+D ++VF++MP +D VS+N+++ A +G+ +AL + M + D
Sbjct: 192 IDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTD-------------- 237
Query: 68 GFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMS 127
L+P++ TLSSVLP + + GKE HGY+ R G S
Sbjct: 238 ----------------------LKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDS 275
Query: 128 NPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQME 187
+ ++ + LVD+Y + + + ++FS+ ++ +S N+++ GY +NG EA LF QM
Sbjct: 276 DVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMV 335
Query: 188 HLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSL 247
V+ P + F SV+ ACA + +L
Sbjct: 336 TAKVK------------------------------------PGAVAFSSVIPACAHLATL 359
Query: 248 RKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGF 307
GK++H + G S+ F+ ALV+MY + ++ AA+ FD + ++ + G
Sbjct: 360 HLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGH 419
Query: 308 EPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRC-GYDSD 366
+ + A+ LF EM + P+ +L+ACS + ++ + G + +
Sbjct: 420 ALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQE 479
Query: 367 VHIGTALVDMYAKCGSLKHA 386
+ A+ D+ + G L+ A
Sbjct: 480 LEHYAAVADLLGRAGKLEEA 499
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 135/286 (47%), Gaps = 70/286 (24%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K ++D+++VF + RD +SWNS+V NG EAL
Sbjct: 286 MYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALR---------------- 329
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFR-MQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
LFR M ++P A SSV+PACA L L LGK+ HGY
Sbjct: 330 ---------------------LFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGY 368
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ R GF SN F+ + LVD+Y +CG++ +A KIF + ++ +EVS II+G+ +G+ EA
Sbjct: 369 VLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEA 428
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFR-------------------D 220
LF++M+ GV+ +++ ++++ L DEA+ F D
Sbjct: 429 VSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVAD 488
Query: 221 LLMRDG-------------IEPTSFTFGSVLIACADMNSLRKGKEI 253
LL R G +EPT + ++L +C+ +L +++
Sbjct: 489 LLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKV 534
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 92/210 (43%), Gaps = 17/210 (8%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG++ A+K+F M D VSW +++ A +G EA+ E M PN V
Sbjct: 387 MYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKR-QGVKPNQV 445
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRM-QAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
++ AV+ + G +EA G M + GL ++V R KL +E + +
Sbjct: 446 AFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKL---EEAYNF 502
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSK-FSIKNE------VSCNTIIVGYCE 172
I++ V + L+ ++ A K+ K F++ +E + CN Y
Sbjct: 503 ISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNM----YAS 558
Query: 173 NGNVAEARELFDQMEHLGVQRG-IISWNSM 201
NG E +L +M G+++ SW M
Sbjct: 559 NGRWKEMAKLRLRMRKKGLRKKPACSWIEM 588
>gi|28564593|dbj|BAC57760.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50509708|dbj|BAD31746.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 703
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 189/564 (33%), Positives = 301/564 (53%), Gaps = 32/564 (5%)
Query: 53 DNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSL 112
D+ P + ++ +I ++G +A+ M G+ P+ T SVL ACA ++L L
Sbjct: 134 DSTLP--LPYNVLISSCLRHGLPLQALAAYQEMGKNGVLPDVFTYPSVLRACAEARELVL 191
Query: 113 GKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCE 172
G+ H + G N F N L+ +Y +CGD+ SA K+F ++ VS N++I Y
Sbjct: 192 GRAVHMHAAGAGMDGNLFFQNALMSMYAKCGDLASARKVFDGMVQRDVVSWNSMISSYAA 251
Query: 173 NGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSF 232
G AEA ELF +M G + ++WN++ GY+ Y A + R+++ R G E
Sbjct: 252 VGQWAEAMELFRRMRDEGTEVNSVTWNTIAGGYIQMRDYRAAVGLIREMV-RGGAEVDYV 310
Query: 233 TFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI 292
T L AC+ + LR GKEIH LA+ + V AL+ MY R +D+ A+M F +
Sbjct: 311 TLVIGLNACSRVGWLRLGKEIHGLAVRMCCDQVESVSNALITMYARCKDMECARMLFRML 370
Query: 293 ENIENLLGKMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGII 338
E P V TWN M +F EM+ + P+ TV
Sbjct: 371 EC--------------PGVVTWNTMLSSFALSDCAEEASSIFREMICRGVKPNYVTVVTY 416
Query: 339 LSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDL 398
L+ C+ +A ++ G+++H + ++ G+ + +L+DMY+K G L A+ + + D+
Sbjct: 417 LALCARVANLQHGQELHGHIVKHGFKGYRLLWNSLIDMYSKSGRLSVAQNVFDTMDDCDM 476
Query: 399 VSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDL 458
+S +M+ Y M G G + F +++ SG +PDHI ++ LSAC H+G + G E F+
Sbjct: 477 ISYTSMIAGYGMQGKGTVALRLFEQMIDSGIKPDHIIMVTVLSACSHSGLVLEGEELFNK 536
Query: 459 MAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
M Y +KP ++HY+CM+DL +RAG L +A E + P P S MW AL+G C GN+E
Sbjct: 537 MVISYGIKPQMEHYSCMIDLYARAGLLEKAEEMLDHTPFPPTSTMWAALVGACHDRGNIE 596
Query: 518 FGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDR 577
G+ AA +L+E+ N G+YV++AN++A AG W +LA R+ M+D + K+PG +W +
Sbjct: 597 IGERAARKLLEMRTENAGHYVLIANMYAAAGCWDELATVRKLMRDLGVTKAPGLAWTDLG 656
Query: 578 DEIHKFRASDRSHDRSEEIYTIID 601
+ F DRS+ + EIY ++D
Sbjct: 657 NGFTPFLVGDRSNPLAPEIYVVLD 680
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 118/416 (28%), Positives = 189/416 (45%), Gaps = 39/416 (9%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG L A+KVF M +RD VSWNS++++ AA G EA+E RM E N V
Sbjct: 217 MYAKCGDLASARKVFDGMVQRDVVSWNSMISSYAAVGQWAEAMELFRRMRDEGTEV-NSV 275
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+ + GG+ Q A+G++ M G E + TL L AC+R+ L LGKE HG
Sbjct: 276 TWNTIAGGYIQMRDYRAAVGLIREMVRGGAEVDYVTLVIGLNACSRVGWLRLGKEIHGLA 335
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R V N L+ +Y RC DM A +F V+ NT++
Sbjct: 336 VRMCCDQVESVSNALITMYARCKDMECARMLFRMLECPGVVTWNTML------------- 382
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
S + + +EA S+FR+++ R G++P T + L
Sbjct: 383 ----------------------SSFALSDCAEEASSIFREMICR-GVKPNYVTVVTYLAL 419
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA + +L+ G+E+H + G + + +L++MY + L AQ FD +++ + +
Sbjct: 420 CARVANLQHGQELHGHIVKHGFKGYRLLWNSLIDMYSKSGRLSVAQNVFDTMDDCDMISY 479
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV-HAYAI 359
G+ A++LF +M+ + PD + +LSACS + G+++ + I
Sbjct: 480 TSMIAGYGMQGKGTVALRLFEQMIDSGIKPDHIIMVTVLSACSHSGLVLEGEELFNKMVI 539
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGK 415
G + + ++D+YA+ G L+ A P + A L A H G
Sbjct: 540 SYGIKPQMEHYSCMIDLYARAGLLEKAEEMLDHTPFPPTSTMWAALVG-ACHDRGN 594
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 96/194 (49%), Gaps = 9/194 (4%)
Query: 247 LRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLV--AAQMAFDEIENIEN--LLGKM 302
LR G ++HAL+++LGL + L+ +Y + L+ AA +A D + L+
Sbjct: 89 LRLGVQLHALSLSLGLSRHPILLPRLLSVYTSHPSLLPSAASVAADSTLPLPYNVLISSC 148
Query: 303 KEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCG 362
G A+ + EM + PD++T +L AC+ + G+ VH +A G
Sbjct: 149 LRHGLP-----LQALAAYQEMGKNGVLPDVFTYPSVLRACAEARELVLGRAVHMHAAGAG 203
Query: 363 YDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFR 422
D ++ AL+ MYAKCG L AR + + D+VS N+M+++YA G E + FR
Sbjct: 204 MDGNLFFQNALMSMYAKCGDLASARKVFDGMVQRDVVSWNSMISSYAAVGQWAEAMELFR 263
Query: 423 RILASGFRPDHISF 436
R+ G + +++
Sbjct: 264 RMRDEGTEVNSVTW 277
>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 687
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 178/548 (32%), Positives = 301/548 (54%), Gaps = 36/548 (6%)
Query: 55 ETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGK 114
+ P+ + +I G+ ++ EA+ + + M G+ + T VL ACARL + LG+
Sbjct: 72 QNPDPFICNTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGR 131
Query: 115 EFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
FH + +NGF S+ FV+N L+ Y CG A +F + ++
Sbjct: 132 RFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDESTV----------------- 174
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTF 234
R +++WN MI+ +++ L ++AF + ++ D + P T
Sbjct: 175 ------------------RDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTM 216
Query: 235 GSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIEN 294
S++ ACA + +L +GK +H+ + LGL + V A+++MYC+ D+ +AQ F+ I
Sbjct: 217 VSLVPACAQLGNLERGKFLHSYSKELGLDENLRVNNAILDMYCKCDDIESAQEVFNRIRE 276
Query: 295 IENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV 354
+ L G + Y A+ LF +M + D T+ +LSAC+ +++GK +
Sbjct: 277 KDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEITLVGVLSACAQTGALDQGKYI 336
Query: 355 HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHG 414
H + + D+ + TALVDMYAKCGS+ A ++R+ ++ + NA++ AMHGHG
Sbjct: 337 HLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHG 396
Query: 415 KEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTC 473
++ I+ F ++ PD ++F++ L AC HAG + G F M + ++P ++HY C
Sbjct: 397 EDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGC 456
Query: 474 MVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNN 533
+VDLL RA ++ +A FI+ +P+ +SV+W LLG C S G+ + + R+IELEP++
Sbjct: 457 VVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSGGHFDLAEKIGRRVIELEPDS 516
Query: 534 TGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRS 593
G YVML+NL+A +W + R++MK++ + K+PGCSWIE IH+F A DRSH ++
Sbjct: 517 CGRYVMLSNLYAGVSQWDHALKLRKQMKNKGIEKTPGCSWIELNGMIHQFVAGDRSHLQT 576
Query: 594 EEIYTIID 601
E+IY +I+
Sbjct: 577 EQIYAMIE 584
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 121/462 (26%), Positives = 214/462 (46%), Gaps = 49/462 (10%)
Query: 110 LSLGKEFHGYITRNGFMSNPFVVNGLVD--VYRRCGDMLSALKIFSKFSIKNEVSCNTII 167
+S K+ H + R + NP + L+ GD+ A K+F++ + CNT+I
Sbjct: 24 ISKTKQAHALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPFICNTMI 83
Query: 168 VGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGI 227
GY + N EA L+ + V+RG+ VDN
Sbjct: 84 RGYARSQNPYEAVSLY----YFMVERGVP---------VDN------------------- 111
Query: 228 EPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQM 287
+T+ VL ACA + +++ G+ H + G SD FV AL++ Y A
Sbjct: 112 ----YTYPFVLAACARLGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCACD 167
Query: 288 AFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLD-LTPDIYTVGIILSACSSLA 346
FDE + + + + + A L EM LD L PD T+ ++ AC+ L
Sbjct: 168 VFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLG 227
Query: 347 TMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLT 406
+ERGK +H+Y+ G D ++ + A++DMY KC ++ A+ + RI D++S +ML+
Sbjct: 228 NLERGKFLHSYSKELGLDENLRVNNAILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLS 287
Query: 407 AYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKP 466
A G+ +E +A F+++ + D I+ + LSAC G++ G L+ +++
Sbjct: 288 GLAKSGYFQEALALFQKMQLNKIELDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINC 347
Query: 467 SLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE-----FGQI 521
L T +VD+ ++ G + A + +++ + + W AL+GG HG+ E F Q+
Sbjct: 348 DLVLETALVDMYAKCGSIDLALQVFRRMRVR-NVFTWNALIGGLAMHGHGEDAISLFDQM 406
Query: 522 AADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDR 563
D+L+ P++ ++ L ++AG + Q MK++
Sbjct: 407 EHDKLM---PDDV-TFIALLCACSHAGLVDEGLAMFQAMKNK 444
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 95/364 (26%), Positives = 140/364 (38%), Gaps = 99/364 (27%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y CGS A VF RD V+WN ++ A GL +A + L+ M+ LDN
Sbjct: 156 YHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLDN------- 208
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
L P+ T+ S++PACA+L L GK H Y
Sbjct: 209 ----------------------------LRPDEVTMVSLVPACAQLGNLERGKFLHSYSK 240
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
G N V N ++D+Y +C D+ SA ++F++ K+ +S +++ G ++G EA
Sbjct: 241 ELGLDENLRVNNAILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEALA 300
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
LF +M+ + IE T VL AC
Sbjct: 301 LFQKMQ------------------------------------LNKIELDEITLVGVLSAC 324
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK 301
A +L +GK IH L + D + ALV+MY + + A F +
Sbjct: 325 AQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMR-------- 376
Query: 302 MKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSSLAT 347
NV+TWNA+ LF +M L PD T +L ACS
Sbjct: 377 ------VRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGL 430
Query: 348 MERG 351
++ G
Sbjct: 431 VDEG 434
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 111/238 (46%), Gaps = 36/238 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC ++ A++VF + E+D +SW S+++ A +G
Sbjct: 257 MYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSG----------------------- 293
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
Y +EA+ + +MQ +E + TL VL ACA+ L GK H I
Sbjct: 294 -------------YFQEALALFQKMQLNKIELDEITLVGVLSACAQTGALDQGKYIHLLI 340
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ + + LVD+Y +CG + AL++F + ++N + N +I G +G+ +A
Sbjct: 341 DKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAI 400
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
LFDQMEH + +++ +++ L DE +MF+ + + IEP +G V+
Sbjct: 401 SLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVV 458
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 121/276 (43%), Gaps = 4/276 (1%)
Query: 245 NSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQ--DLVAAQMAFDEIENIENLLGKM 302
S+ K K+ HAL + L + L+ DL A+ F +++N + +
Sbjct: 22 TSISKTKQAHALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPFICNT 81
Query: 303 KEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCG 362
G+ + + A+ L+ M+ + D YT +L+AC+ L ++ G++ H ++ G
Sbjct: 82 MIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNG 141
Query: 363 YDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFR 422
+ SD+ + AL+ Y CGS A + + D+V+ N M+ A+ G ++
Sbjct: 142 FGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLD 201
Query: 423 RILA-SGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRA 481
+ RPD ++ +S + AC G+++ G + +L+ ++D+ +
Sbjct: 202 EMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLDENLRVNNAILDMYCKC 261
Query: 482 GELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
++ A E +I D + W ++L G G +
Sbjct: 262 DDIESAQEVFNRI-REKDVLSWTSMLSGLAKSGYFQ 296
>gi|310656753|gb|ADP02188.1| PPR domain-containing protein [Triticum aestivum]
Length = 788
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 209/631 (33%), Positives = 326/631 (51%), Gaps = 44/631 (6%)
Query: 4 KCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWS 63
K G + A+++F MP+R VS+ ++V A G V EA+E E+ S ++ ++
Sbjct: 161 KAGDIASARRLFDGMPDRTVVSYTTMVDALMKRGRVAEAVELYEQCPS-----GSVAFFT 215
Query: 64 AVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY-ITR 122
A I GF +N A+G+ +M + + PN T+ ++ AC + L G I
Sbjct: 216 ATISGFVRNELHHNALGVFRKMLSCRVRPNGITIVCMIKACVGAGEFGLALSIVGLAIKS 275
Query: 123 NGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAREL 182
N F S+ V N L+ +Y R GD +A K+F + +K+ VS ++ Y E+G++ AR +
Sbjct: 276 NFFESSIEVQNSLITLYLRMGDAAAARKVFDEMDVKDVVSWTALLDVYSESGDLDGARRV 335
Query: 183 FDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACA 242
D M +R +SW ++I+ + EA ++ +L DG P F SVL ACA
Sbjct: 336 LDAMP----ERNEVSWGTLIARHEQRGNAAEAVKLYSQMLA-DGCRPNISCFSSVLSACA 390
Query: 243 DMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL--- 299
+ LR G IHA ++ +G ++ FV +L++MYC+ AQ FD + +N++
Sbjct: 391 SLEDLRGGARIHARSLKMGSSTNVFVSCSLIDMYCKCNKCGDAQTIFDTLPQ-KNIVCWN 449
Query: 300 ---------GKMKEDGF------EPNVYTWN--------------AMQLFSEMLSLDLTP 330
GKM E + N+ +WN A++ F+ ML+ P
Sbjct: 450 SLVSGYSYNGKMVEAMYLFKKMPARNLASWNTIISGYAQNRQFVDALKSFNAMLASGQVP 509
Query: 331 DIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAY 390
T +L AC++L ++ GK HA I+ G + + IGTAL DMYAK G L+ ++ +
Sbjct: 510 GEITFSSVLLACANLCSLVTGKMAHAKTIKLGIEESIFIGTALSDMYAKSGDLQSSKRMF 569
Query: 391 KRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIK 450
++ + V+ AM+ A +G +E I F ++A+G P+ +FL+ L AC H G ++
Sbjct: 570 YQMPERNDVTWTAMIQGLAENGFAEESILLFEDMMATGMTPNEHTFLALLFACSHGGLVE 629
Query: 451 TGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGC 510
+FD M + P KHYTCMVD+L+RAG L EA + K P ++ W ALL C
Sbjct: 630 QAIHYFDKMQALGISPKEKHYTCMVDVLARAGRLAEAEALLMKTPSKSEANSWAALLSAC 689
Query: 511 VSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPG 570
++ N E + AA RL EL +NT YV+L+N++A GRW D AR R MK + K G
Sbjct: 690 NTYRNEEIAERAAKRLHELAKDNTAGYVLLSNMYASCGRWKDAARIRVLMKGTTLKKDGG 749
Query: 571 CSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
CSW++ R + H F + + H S EI I+D
Sbjct: 750 CSWVQVRGQYHAFFSWEAKHPLSMEIDEILD 780
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 132/408 (32%), Positives = 198/408 (48%), Gaps = 11/408 (2%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y + G A+KVF M +D VSW +++ + +G + A L+ M N V
Sbjct: 291 LYLRMGDAAAARKVFDEMDVKDVVSWTALLDVYSESGDLDGARRVLDAMPE-----RNEV 345
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW +I Q G EA+ + +M A+G PN SSVL ACA L+ L G H
Sbjct: 346 SWGTLIARHEQRGNAAEAVKLYSQMLADGCRPNISCFSSVLSACASLEDLRGGARIHARS 405
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G +N FV L+D+Y +C A IF KN V N+++ GY NG + EA
Sbjct: 406 LKMGSSTNVFVSCSLIDMYCKCNKCGDAQTIFDTLPQKNIVCWNSLVSGYSYNGKMVEAM 465
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LF +M R + SWN++ISGY N + +A F +L G P TF SVL+A
Sbjct: 466 YLFKKMP----ARNLASWNTIISGYAQNRQFVDALKSFNAMLA-SGQVPGEITFSSVLLA 520
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA++ SL GK HA I LG++ F+G AL +MY + DL +++ F ++ ++
Sbjct: 521 CANLCSLVTGKMAHAKTIKLGIEESIFIGTALSDMYAKSGDLQSSKRMFYQMPERNDVTW 580
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G N + ++ LF +M++ +TP+ +T +L ACS +E+
Sbjct: 581 TAMIQGLAENGFAEESILLFEDMMATGMTPNEHTFLALLFACSHGGLVEQAIHYFDKMQA 640
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHAR-LAYKRISTPDLVSQNAMLTA 407
G T +VD+ A+ G L A L K S + S A+L+A
Sbjct: 641 LGISPKEKHYTCMVDVLARAGRLAEAEALLMKTPSKSEANSWAALLSA 688
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 122/484 (25%), Positives = 211/484 (43%), Gaps = 74/484 (15%)
Query: 127 SNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQM 186
++PF + +V + + GD+ SA ++F + VS T++ + G VAEA EL++Q
Sbjct: 147 ASPFAYDFMVSEHVKAGDIASARRLFDGMPDRTVVSYTTMVDALMKRGRVAEAVELYEQC 206
Query: 187 EHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNS 246
+ + + ISG+V N L+ A +FR +L + P T ++ AC
Sbjct: 207 P----SGSVAFFTATISGFVRNELHHNALGVFRKML-SCRVRPNGITIVCMIKACVGAGE 261
Query: 247 LRKGKEIHALAIALG-LQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE-----NIENLLG 300
I LAI +S V +L+ +Y R D AA+ FDE++ + LL
Sbjct: 262 FGLALSIVGLAIKSNFFESSIEVQNSLITLYLRMGDAAAARKVFDEMDVKDVVSWTALLD 321
Query: 301 KMKEDG------------FEPNVYTW--------------NAMQLFSEMLSLDLTPDIYT 334
E G E N +W A++L+S+ML+ P+I
Sbjct: 322 VYSESGDLDGARRVLDAMPERNEVSWGTLIARHEQRGNAAEAVKLYSQMLADGCRPNISC 381
Query: 335 VGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKC-------------- 380
+LSAC+SL + G ++HA +++ G ++V + +L+DMY KC
Sbjct: 382 FSSVLSACASLEDLRGGARIHARSLKMGSSTNVFVSCSLIDMYCKCNKCGDAQTIFDTLP 441
Query: 381 -----------------GSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRR 423
G + A +K++ +L S N +++ YA + + + F
Sbjct: 442 QKNIVCWNSLVSGYSYNGKMVEAMYLFKKMPARNLASWNTIISGYAQNRQFVDALKSFNA 501
Query: 424 ILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGE 483
+LASG P I+F S L AC + S+ TG ++ S+ T + D+ +++G+
Sbjct: 502 MLASGQVPGEITFSSVLLACANLCSLVTGKMAHAKTIKLGIEESIFIGTALSDMYAKSGD 561
Query: 484 LGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIE--LEPNNTGNYVMLA 541
L + ++P D V W A++ G +G E + + ++ + PN + LA
Sbjct: 562 LQSSKRMFYQMPERND-VTWTAMIQGLAENGFAEESILLFEDMMATGMTPN---EHTFLA 617
Query: 542 NLFA 545
LFA
Sbjct: 618 LLFA 621
>gi|147854092|emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
Length = 886
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 189/599 (31%), Positives = 313/599 (52%), Gaps = 74/599 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC +DA K+F MPERD SWN+
Sbjct: 342 MYAKCNVFEDAIKLFDEMPERDVASWNN-------------------------------- 369
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
VI + Q+G E+A+ + M+ G +P++ TL++V+ +CARL L GKE H +
Sbjct: 370 ----VISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMEL 425
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R+GF + FV + LVD+Y +CG C + A+
Sbjct: 426 VRSGFALDGFVSSALVDMYGKCG---------------------------C----LEMAK 454
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
E+F+Q++ ++ ++SWNSMI+GY +FR + +GI PT T S+L+A
Sbjct: 455 EVFEQIQ----RKNVVSWNSMIAGYSLKGDSKSCIELFRRM-DEEGIRPTLTTLSSILMA 509
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C+ +L+ GK IH I +++D FV +L+++Y + ++ +A+ F + +
Sbjct: 510 CSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSW 569
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
+ G+ A+ +F++M + PD T +L ACS LA +E+GK++H + I
Sbjct: 570 NVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIE 629
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
+ + + AL+DMYAKCG++ A + ++ D VS +M+ AY HG E +
Sbjct: 630 SKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKL 689
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFD-LMAYYDVKPSLKHYTCMVDLLS 479
F ++ S +PD ++FL+ LSAC HAG + G +F+ ++A Y KP+++HY+C++DLL
Sbjct: 690 FEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLG 749
Query: 480 RAGELGEAYEFIKKIP-MAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYV 538
R G L EAYE +++ P + D + L C H L+ G+ LIE +P++ Y+
Sbjct: 750 RVGRLREAYEILQRTPDIREDVGLLSTLFSACHLHKKLDLGEQIGRLLIEKDPDDPSTYI 809
Query: 539 MLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
+L+N++A +W ++ + R K+K+ + K+PGCSWIE IH F D+SH +++ IY
Sbjct: 810 ILSNMYASVKKWDEVRKVRLKIKELGLKKNPGCSWIEVGKRIHPFVVEDKSHPQADMIY 868
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 121/444 (27%), Positives = 203/444 (45%), Gaps = 52/444 (11%)
Query: 77 EAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLV 136
E G+ +R+ A R L+ V A L++L LGK H I G +N + L+
Sbjct: 185 EGEGIWYRVLARN-----RCLARVTAGSA-LEEL-LGKLIHQKIVSLGLQNNITLCKSLI 237
Query: 137 DVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGII 196
++Y C SA +F +I+N + I
Sbjct: 238 NLYFSCHLFQSAKLVFQ--TIENPLD--------------------------------IT 263
Query: 197 SWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHAL 256
WN +++ N ++ E +F LL ++P +FT+ SVL AC+ + + GK +H
Sbjct: 264 LWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHTH 323
Query: 257 AIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDE-----IENIENLLGKMKEDGFEPNV 311
I G D V + V MY + A FDE + + N++ +DG +P
Sbjct: 324 VIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDG-QPE- 381
Query: 312 YTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGT 371
A++LF EM PD T+ ++S+C+ L +ERGK++H +R G+ D + +
Sbjct: 382 ---KALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSS 438
Query: 372 ALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRP 431
ALVDMY KCG L+ A+ +++I ++VS N+M+ Y++ G K I FRR+ G RP
Sbjct: 439 ALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRP 498
Query: 432 DHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFI 491
+ S L AC + +++ G + V+ + + ++DL + G +G A
Sbjct: 499 TLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVF 558
Query: 492 KKIPMAPDSVMWGALLGGCVSHGN 515
+ +P + V W ++ G V G+
Sbjct: 559 QNMPKT-NVVSWNVMISGYVKVGS 581
>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Cucumis sativus]
Length = 849
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 183/577 (31%), Positives = 310/577 (53%), Gaps = 40/577 (6%)
Query: 23 CVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGML 82
CV + G ++ A + E+M N V+W+ +I Q GY EAI +
Sbjct: 205 CVGCGLIDMFVKGRGDLVSAFKVFEKMPE-----RNAVTWTLMITRLMQFGYAGEAIDLF 259
Query: 83 FRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRC 142
M G EP+ TLS V+ ACA ++ L LG++ H R+G + V L+++Y +C
Sbjct: 260 LEMILSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKC 319
Query: 143 GDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMI 202
+G++ AR++FDQ+ + + SW +MI
Sbjct: 320 S----------------------------VDGSMCAARKIFDQI----LDHNVFSWTAMI 347
Query: 203 SGYVDNSLYDE-AFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALG 261
+GYV YDE A +FR +++ I P FTF S L ACA++ +LR G+++ A+ LG
Sbjct: 348 TGYVQKGGYDEEALDLFRGMILTHVI-PNHFTFSSTLKACANLAALRIGEQVFTHAVKLG 406
Query: 262 LQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFS 321
S V +L+ MY R + A+ AFD + + D + N+ + A++LF+
Sbjct: 407 FSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFN 466
Query: 322 EMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCG 381
E+ + +T +LS +S+ T+ +G+Q+HA I+ G + + AL+ MY++CG
Sbjct: 467 EIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCG 526
Query: 382 SLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALS 441
+++ A ++ + +++S +++T +A HG + + F ++L G RP+ +++++ LS
Sbjct: 527 NIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNLVTYIAVLS 586
Query: 442 ACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDS 500
AC H G + G + F M + V P ++HY CMVD+L R+G L EA +FI +P D+
Sbjct: 587 ACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACMVDILGRSGSLSEAIQFINSMPYKADA 646
Query: 501 VMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKM 560
++W LG C HGNLE G+ AA +IE EP++ Y++L+NL+A +W +++ R+ M
Sbjct: 647 LVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYASTSKWDEVSNIRKAM 706
Query: 561 KDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
K++ + K GCSW+E +++HKF D SH ++ EIY
Sbjct: 707 KEKNLIKEAGCSWVEVENKVHKFYVGDTSHPKAAEIY 743
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 131/515 (25%), Positives = 232/515 (45%), Gaps = 75/515 (14%)
Query: 20 ERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAI 79
+ D V+ NS+++ + G +A + M S + +L+SWSA++ F N A+
Sbjct: 98 QLDSVTLNSLISLYSKCGQWEKATSIFQLMGS----SRDLISWSAMVSCFANNNMGFRAL 153
Query: 80 GMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVN-GLVDV 138
M G PN ++ AC+ + +S+G G++ + G++ + V GL+D+
Sbjct: 154 LTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDM 213
Query: 139 YRRC-GDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIIS 197
+ + GD++SA K+F K +N V+ +I + G EA +LF +M
Sbjct: 214 FVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEM----------- 262
Query: 198 WNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALA 257
++SGY EP FT V+ ACA+M L G+++H+ A
Sbjct: 263 ---ILSGY----------------------EPDRFTLSGVISACANMELLLLGQQLHSQA 297
Query: 258 IALGLQSDTFVGGALVEMYCRYQ---DLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTW 314
I GL D VG L+ MY + + AA+ FD+I + NV++W
Sbjct: 298 IRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQI--------------LDHNVFSW 343
Query: 315 NAM---------------QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
AM LF M+ + P+ +T L AC++LA + G+QV +A+
Sbjct: 344 TAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAV 403
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
+ G+ S + +L+ MYA+ G + AR A+ + +L+S N ++ AYA + + +E +
Sbjct: 404 KLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALE 463
Query: 420 HFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLS 479
F I G +F S LS G+I G + + +K + ++ + S
Sbjct: 464 LFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYS 523
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
R G + A++ + + + + W +++ G HG
Sbjct: 524 RCGNIESAFQVFEDME-DRNVISWTSIITGFAKHG 557
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 133/556 (23%), Positives = 243/556 (43%), Gaps = 81/556 (14%)
Query: 55 ETPNLVSWSAVIGGFTQ---NGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLS 111
+ P + + + G Q NG +AI L M +G P+ +T S L C R +
Sbjct: 24 QFPTFTNPNPLTGRLIQEINNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFD 83
Query: 112 LGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYC 171
+G H +T++ + +N L+ +Y +CG A IF
Sbjct: 84 IGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIF------------------- 124
Query: 172 ENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTS 231
+ +G R +ISW++M+S + +N++ A F D++ +G P
Sbjct: 125 ---------------QLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMI-ENGYYPNE 168
Query: 232 FTFGSVLIACADMNSLRKGKEIHALAIALG-LQSDTFVGGALVEMYCRYQ-DLVAAQMAF 289
+ F + AC+ + G I + G LQSD VG L++M+ + + DLV+A F
Sbjct: 169 YCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVF 228
Query: 290 DEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATME 349
+++ + + Y A+ LF EM+ PD +T+ ++SAC+++ +
Sbjct: 229 EKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACANMELLL 288
Query: 350 RGKQVHAYAIRCGYDSDVHIGTALVDMYAKC---GSLKHARLAYKRISTPDLVSQNAMLT 406
G+Q+H+ AIR G D +G L++MYAKC GS+ AR + +I ++ S AM+T
Sbjct: 289 LGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMIT 348
Query: 407 AYAMH-GHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFF--------- 456
Y G+ +E + FR ++ + P+H +F S L AC + +++ G + F
Sbjct: 349 GYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFS 408
Query: 457 --------------------DLMAYYDV--KPSLKHYTCMVDLLSRAGELGEAYEFIKKI 494
D +D+ + +L Y ++D ++ EA E +I
Sbjct: 409 SVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEI 468
Query: 495 P---MAPDSVMWGALLGGCVSHGNLEFGQIAADRLIE--LEPNNTGNYVMLANLFAYAGR 549
M + + +LL G S G + G+ R+I+ L+ N + +++ +++ G
Sbjct: 469 EDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALIS-MYSRCGN 527
Query: 550 WSDLARTRQKMKDRRM 565
+ + M+DR +
Sbjct: 528 IESAFQVFEDMEDRNV 543
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 106/390 (27%), Positives = 169/390 (43%), Gaps = 75/390 (19%)
Query: 1 MYGKC---GSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETP 57
MY KC GS+ A+K+F + + + SW +++T
Sbjct: 315 MYAKCSVDGSMCAARKIFDQILDHNVFSWTAMIT-------------------------- 348
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
G + GYDEEA+ + M + PN T SS L ACA L L +G++
Sbjct: 349 ---------GYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVF 399
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
+ + GF S V N L+ +Y R G + A K F KN +S NT+I Y +N N
Sbjct: 400 THAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSE 459
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
EA ELF+++E G+ ++FTF S+
Sbjct: 460 EALELFNEIED------------------------------------QGMGASAFTFASL 483
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
L A + ++ KG++IHA I GL+ + V AL+ MY R ++ +A F+++E+
Sbjct: 484 LSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNV 543
Query: 298 LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG-KQVHA 356
+ GF + + A++LF +ML + P++ T +LSACS + + G K +
Sbjct: 544 ISWTSIITGFAKHGFATQALELFHKMLEEGVRPNLVTYIAVLSACSHVGLVNEGWKHFKS 603
Query: 357 YAIRCGYDSDVHIGTALVDMYAKCGSLKHA 386
G + +VD+ + GSL A
Sbjct: 604 MYTEHGVIPRMEHYACMVDILGRSGSLSEA 633
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 2/117 (1%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +CG+++ A +VF+ M +R+ +SW S++T A +G +ALE +M + PNLV
Sbjct: 521 MYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLE-EGVRPNLV 579
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEF 116
++ AV+ + G E M E G+ P + ++ R LS +F
Sbjct: 580 TYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACMVDILGRSGSLSEAIQF 636
>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 837
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 186/551 (33%), Positives = 303/551 (54%), Gaps = 39/551 (7%)
Query: 52 LDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLS 111
L+ + N V W+A++ G+ QNG +A+ M A+G+E N T ++L AC+ +
Sbjct: 223 LEFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARC 282
Query: 112 LGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYC 171
G++ HG+I ++GF SN +V + LVD+Y +CGD+ KN
Sbjct: 283 FGEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDL------------KN------------ 318
Query: 172 ENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTS 231
A+ + + ME ++SWNS++ G+V + L +EA +F+++ R+ ++
Sbjct: 319 -------AKNMLETME----DDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRN-MKIDD 366
Query: 232 FTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDE 291
+TF SVL C + S+ K +H L I G ++ V ALV+MY + D+ A F++
Sbjct: 367 YTFPSVLNCCV-VGSINP-KSVHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEK 424
Query: 292 IENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG 351
+ + + G+ N ++++F +M + PD + V ILSAC+ L +E G
Sbjct: 425 MLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSACAELTLLEFG 484
Query: 352 KQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMH 411
KQVH I+ G + +LV MYAKCG L A + + D+++ A++ YA +
Sbjct: 485 KQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQVKDVITWTAIIVGYAQN 544
Query: 412 GHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKH 470
G G+ + + +++SG RPD I+F+ L AC HAG + G ++F M Y +KP +H
Sbjct: 545 GKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLVDEGRKYFQQMNKVYGIKPGPEH 604
Query: 471 YTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELE 530
Y CM+DL R+G+L EA + + ++ + PD+ +W +LL C H NLE + AA L ELE
Sbjct: 605 YACMIDLFGRSGKLDEAKQLLDQMDVKPDATVWKSLLSACRVHENLELAERAATNLFELE 664
Query: 531 PNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSH 590
P N YVML+N+++ + +W+D+A+ R+ MK + + K PGCSW+E ++ F + DR H
Sbjct: 665 PMNAMPYVMLSNMYSASRKWNDVAKIRKLMKSKGIVKEPGCSWLEINSRVNTFISDDRGH 724
Query: 591 DRSEEIYTIID 601
R EIYT ID
Sbjct: 725 PREAEIYTKID 735
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 120/391 (30%), Positives = 204/391 (52%), Gaps = 28/391 (7%)
Query: 130 FVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHL 189
+ N L++ + G + A K+F K K+E S NT+I Y G + EARELFD
Sbjct: 66 YQTNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGCS-- 123
Query: 190 GVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRK 249
+ I+W+S+ISGY EAF +FR + + +G + + FT GSVL C+ + ++
Sbjct: 124 --CKSSITWSSIISGYCKFGCKVEAFDLFRSMRL-EGWKASQFTLGSVLRVCSSLGLIQT 180
Query: 250 GKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFD--EIENIENLLGKMKEDGF 307
G+ IH + G + + FV LV+MY + + + A+ F E + ++L G+
Sbjct: 181 GEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGY 240
Query: 308 EPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDV 367
N + A++ F M + + + YT IL+ACSS+ G+QVH + ++ G+ S+V
Sbjct: 241 AQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNV 300
Query: 368 HIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILAS 427
++ +ALVDMYAKCG LK+A+ + + D+VS N+++ + HG +E + F+ +
Sbjct: 301 YVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGR 360
Query: 428 GFRPDHISFLSALSAC---------VHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLL 478
+ D +F S L+ C VH IKTG E + L++ +VD+
Sbjct: 361 NMKIDDYTFPSVLNCCVVGSINPKSVHGLIIKTGFENYKLVS-----------NALVDMY 409
Query: 479 SRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
++ G++ AY +K+ + D + W +L+ G
Sbjct: 410 AKTGDMDCAYTVFEKM-LEKDVISWTSLVTG 439
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 99/417 (23%), Positives = 175/417 (41%), Gaps = 84/417 (20%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG L +AK + + M + D +V
Sbjct: 309 MYAKCGDLKNAKNMLETMEDDD------------------------------------VV 332
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW++++ GF ++G +EEA+ + M ++ + T SVL C + ++ K HG I
Sbjct: 333 SWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCCV-VGSIN-PKSVHGLI 390
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ GF + V N LVD+Y + GDM A +F K K+ +S +++ GY +N +
Sbjct: 391 IKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNS----- 445
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
++E+ +F D+ + G+ P F S+L A
Sbjct: 446 ------------------------------HEESLKIFCDMRV-TGVNPDQFIVASILSA 474
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA++ L GK++H I GL+ V +LV MY + L A F ++ + +
Sbjct: 475 CAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQVKDVITW 534
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV-----H 355
G+ N N+++ + M+S PD T +L ACS ++ G++
Sbjct: 535 TAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLVDEGRKYFQQMNK 594
Query: 356 AYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST-PDLVSQNAMLTAYAMH 411
Y I+ G + ++D++ + G L A+ ++ PD ++L+A +H
Sbjct: 595 VYGIKPGPEH----YACMIDLFGRSGKLDEAKQLLDQMDVKPDATVWKSLLSACRVH 647
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 130/300 (43%), Gaps = 43/300 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G +D A VF+ M E+D ++
Sbjct: 408 MYAKTGDMDCAYTVFEKMLEKD------------------------------------VI 431
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW++++ G+ QN EE++ + M+ G+ P+ ++S+L ACA L L GK+ H
Sbjct: 432 SWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQVHLDF 491
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
++G + V N LV +Y +CG + A IF +K+ ++ IIVGY +NG +
Sbjct: 492 IKSGLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQVKDVITWTAIIVGYAQNGKGRNSL 551
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+ +D M G + I++ ++ L DE F+ + GI+P G A
Sbjct: 552 KFYDAMVSSGTRPDFITFIGLLFACSHAGLVDEGRKYFQQMNKVYGIKP-----GPEHYA 606
Query: 241 CADMNSLRKGK--EIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
C R GK E L + ++ D V +L+ +++L A+ A + +E +
Sbjct: 607 CMIDLFGRSGKLDEAKQLLDQMDVKPDATVWKSLLSACRVHENLELAERAATNLFELEPM 666
>gi|334186267|ref|NP_192012.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635642|sp|Q9SV26.2|PP297_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g01030, mitochondrial; Flags: Precursor
gi|332656570|gb|AEE81970.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 768
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 206/667 (30%), Positives = 331/667 (49%), Gaps = 108/667 (16%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
YG+C SL A K+F MP+RD ++WN +V +G +
Sbjct: 33 YGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSG-----------------------N 69
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W E+A+ + MQ G + T+ +L C+ + + G++ HGY+
Sbjct: 70 W-------------EKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVL 116
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
R G SN + N L+ +Y R G + + K+F+ +N S N+I+ Y + G V +A
Sbjct: 117 RLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIG 176
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
L D+ME G++ I++WNS++SGY L +A ++ + + + G++P++ + S+L A
Sbjct: 177 LLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIA-GLKPSTSSISSLLQAV 235
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFD--EIENI---- 295
A+ L+ GK IH + L D +V L++MY + L A+M FD + +NI
Sbjct: 236 AEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWN 295
Query: 296 ---------------ENLLGKMKEDGFEPNVYTWN--------------AMQLFSEMLSL 326
E L+ +M+++G +P+ TWN A+ + +M
Sbjct: 296 SLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEK 355
Query: 327 DLTPDIYTVGIILSACSS-----------------------------------LATMERG 351
+ P++ + I S CS L+ + G
Sbjct: 356 GVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSG 415
Query: 352 KQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMH 411
K+VH + +R D ++ TALVDMY K G L+ A + I L S N ML YAM
Sbjct: 416 KEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMF 475
Query: 412 GHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKH 470
G G+EGIA F +L +G PD I+F S LS C ++G ++ G ++FDLM + Y + P+++H
Sbjct: 476 GRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEH 535
Query: 471 YTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELE 530
+CMVDLL R+G L EA++FI+ + + PD+ +WGA L C H +LE +IA RL LE
Sbjct: 536 CSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLE 595
Query: 531 PNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSH 590
P+N+ NY+M+ NL++ RW D+ R R M++ R+ SWI+ +H F A ++H
Sbjct: 596 PHNSANYMMMINLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTH 655
Query: 591 DRSEEIY 597
+IY
Sbjct: 656 PDEGDIY 662
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 126/461 (27%), Positives = 211/461 (45%), Gaps = 65/461 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY + G L+ ++KVF M +R+ SWNS++++ G V +A+ L+ M + P++V
Sbjct: 133 MYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEME-ICGLKPDIV 191
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W++++ G+ G ++AI +L RMQ GL+P+ ++SS+L A A L LGK HGYI
Sbjct: 192 TWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYI 251
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
RN + +V L+D+Y + G + A +F KN V+ N+++ G + +A
Sbjct: 252 LRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAE 311
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSM----------------------- 217
L +ME G++ I+WNS+ SGY ++A +
Sbjct: 312 ALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGC 371
Query: 218 -----FRDLL------MRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDT 266
FR+ L +G+ P + T ++L ++ L GKE+H + L D
Sbjct: 372 SKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDA 431
Query: 267 FVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQL------- 319
+V ALV+MY + DL +A F I+N ++ +WN M +
Sbjct: 432 YVATALVDMYGKSGDLQSAIEIFWGIKN--------------KSLASWNCMLMGYAMFGR 477
Query: 320 -------FSEMLSLDLTPDIYTVGIILSACSSLATMERG-KQVHAYAIRCGYDSDVHIGT 371
FS ML + PD T +LS C + ++ G K R G + +
Sbjct: 478 GEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCS 537
Query: 372 ALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNAMLTAYAMH 411
+VD+ + G L A + +S PD A L++ +H
Sbjct: 538 CMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIH 578
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 99/442 (22%), Positives = 185/442 (41%), Gaps = 77/442 (17%)
Query: 112 LGKEFHGYITRNGF-MSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGY 170
LG HG + + G S+ VV+ + Y RC + A K+F + +++++ N I++
Sbjct: 5 LGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVN 64
Query: 171 CENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPT 230
+GN +A ELF +M+ G + YD
Sbjct: 65 LRSGNWEKAVELFREMQFSGAKA-----------------YDS----------------- 90
Query: 231 SFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFD 290
T +L C++ +G++IH + LGL+S+ + +L+ MY R L ++ F+
Sbjct: 91 --TMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFN 148
Query: 291 E---------------------IENIENLLGKMKEDGFEPNVYTWN-------------- 315
+++ LL +M+ G +P++ TWN
Sbjct: 149 SMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKD 208
Query: 316 AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVD 375
A+ + M L P ++ +L A + ++ GK +H Y +R DV++ T L+D
Sbjct: 209 AIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLID 268
Query: 376 MYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHIS 435
MY K G L +AR+ + + ++V+ N++++ + K+ A R+ G +PD I+
Sbjct: 269 MYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAIT 328
Query: 436 FLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIP 495
+ S S G + + M V P++ +T + S+ G A + K+
Sbjct: 329 WNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQ 388
Query: 496 ---MAPDSVMWGALLG--GCVS 512
+ P++ LL GC+S
Sbjct: 389 EEGVGPNAATMSTLLKILGCLS 410
>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
Length = 1161
Score = 344 bits (883), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 195/598 (32%), Positives = 305/598 (51%), Gaps = 73/598 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +CGS+ +A+ VF+ RD ++
Sbjct: 530 MYRRCGSIMEAQNVFEGTRARD------------------------------------II 553
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+++I G Q+G E A + M+ EGLEP+ T +SVL C + L LG++ H I
Sbjct: 554 SWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLI 613
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+G + + N L+++Y RCG + +A
Sbjct: 614 IESGLQLDVNLGNALINMYIRCGSL-------------------------------QDAY 642
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
E+F + H R ++SW +MI G+ D +AF +F + DG +P TF S+L A
Sbjct: 643 EVFHSLRH----RNVMSWTAMIGGFADQGEDRKAFELFWQM-QNDGFKPVKSTFSSILKA 697
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C L +GK++ A + G + DT VG AL+ Y + + A+ FD++ N + +
Sbjct: 698 CMSSACLDEGKKVIAHILNSGYELDTGVGNALISAYSKSGSMTDARKVFDKMPNRDIMSW 757
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G+ N A+Q +M + + ++ IL+ACSS + +E GK+VHA ++
Sbjct: 758 NKMIAGYAQNGLGGTALQFAYQMQEQGVVLNKFSFVSILNACSSFSALEEGKRVHAEIVK 817
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
DV +G AL+ MYAKCGSL+ A+ + + ++V+ NAM+ AYA HG + +
Sbjct: 818 RKMQGDVRVGAALISMYAKCGSLEEAQEVFDNFTEKNVVTWNAMINAYAQHGLASKALDF 877
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFF-DLMAYYDVKPSLKHYTCMVDLLS 479
F + G +PD +F S LSAC H+G + G+ F L + + + P+++HY C+V LL
Sbjct: 878 FNCMDKEGIKPDGSTFTSILSACNHSGLVMEGNRIFSSLESQHGLSPTIEHYGCLVGLLG 937
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
RAG EA I ++P PD+ +W LLG C HGN+ + AA+ ++L N YV+
Sbjct: 938 RAGRFQEAETLINQMPFPPDAAVWETLLGACRIHGNVALAEHAANNALKLNARNPAVYVL 997
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
L+N++A AGRW D+A+ R+ M+ R + K PG SWIE + IH+F A+DRSH + EIY
Sbjct: 998 LSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIY 1055
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 145/514 (28%), Positives = 233/514 (45%), Gaps = 73/514 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +CG L A+++F MP+RD L+
Sbjct: 429 MYARCGDLPRARELFNTMPKRD------------------------------------LI 452
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A+I G+ + EA+ + +MQ+EG++P T +L AC S GK H I
Sbjct: 453 SWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDI 512
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R+G SN + N L+++YRRCG ++ A +F G A
Sbjct: 513 LRSGIKSNGHLANALMNMYRRCGSIMEAQNVFE--------------------GTRA--- 549
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
R IISWNSMI+G+ + Y+ A+ +F ++ ++G+EP TF SVL+
Sbjct: 550 ------------RDIISWNSMIAGHAQHGSYEAAYKLFLEM-KKEGLEPDKITFASVLVG 596
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C + +L G++IH L I GLQ D +G AL+ MY R L A F + + +
Sbjct: 597 CKNPEALELGRQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSW 656
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
GF A +LF +M + P T IL AC S A ++ GK+V A+ +
Sbjct: 657 TAMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILN 716
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
GY+ D +G AL+ Y+K GS+ AR + ++ D++S N M+ YA +G G +
Sbjct: 717 SGYELDTGVGNALISAYSKSGSMTDARKVFDKMPNRDIMSWNKMIAGYAQNGLGGTALQF 776
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSR 480
++ G + SF+S L+AC +++ G + ++ ++ ++ + ++
Sbjct: 777 AYQMQEQGVVLNKFSFVSILNACSSFSALEEGKRVHAEIVKRKMQGDVRVGAALISMYAK 836
Query: 481 AGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
G L EA E + V W A++ HG
Sbjct: 837 CGSLEEAQEVFDNF-TEKNVVTWNAMINAYAQHG 869
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 133/517 (25%), Positives = 232/517 (44%), Gaps = 73/517 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC S+ DA +VF MP RD ++
Sbjct: 126 MYVKCRSVSDAHQVFLKMPRRD------------------------------------VI 149
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+++I + Q G+ ++A + MQ G P+ T S+L AC +L GK+ H I
Sbjct: 150 SWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELEYGKKIHSKI 209
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
G+ +P V N L+++Y +C D+ SA ++FS ++ VS NT++ Y + V E
Sbjct: 210 IEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYVEECI 269
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LF QM G+ +++ +++ + S+ DE
Sbjct: 270 GLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDE--------------------------- 302
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
GK IH LA+ GL SD VG AL M+ R D+ A+ A + + + ++
Sbjct: 303 ---------GKRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVY 353
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
+ + A + + +M S + + T +L+ACS+ + G+ +H++
Sbjct: 354 NALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISE 413
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
G+ SDV IG +L+ MYA+CG L AR + + DL+S NA++ YA E +
Sbjct: 414 VGHSSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKL 473
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSR 480
++++ + G +P ++FL LSAC ++ + G + + +K + ++++ R
Sbjct: 474 YKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRR 533
Query: 481 AGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
G + EA + A D + W +++ G HG+ E
Sbjct: 534 CGSIMEAQNVFEGT-RARDIISWNSMIAGHAQHGSYE 569
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 137/519 (26%), Positives = 241/519 (46%), Gaps = 62/519 (11%)
Query: 8 LDDAKKVFKMMPERDCVSWNSVVTACAAN----GLVLEALECLERMSSLDNETPNLVSWS 63
LD+ K++ K+ S V TA A G V A + LE + D +V ++
Sbjct: 300 LDEGKRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRD-----VVVYN 354
Query: 64 AVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRN 123
A+I Q+G+ EEA ++M+++G+ N T SVL AC+ + L G+ H +I+
Sbjct: 355 ALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEV 414
Query: 124 GFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELF 183
G S+ + N L+ +Y RCGD+ A ++F+ ++ +S N II GY + EA +L+
Sbjct: 415 GHSSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLY 474
Query: 184 DQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACAD 243
QM+ GV+ G +++ ++S ++S Y +
Sbjct: 475 KQMQSEGVKPGRVTFLHLLSACTNSSAYSD------------------------------ 504
Query: 244 MNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAF------DEIENIEN 297
GK IH + G++S+ + AL+ MY R ++ AQ F D I
Sbjct: 505 ------GKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSM 558
Query: 298 LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAY 357
+ G + +E A +LF EM L PD T +L C + +E G+Q+H
Sbjct: 559 IAGHAQHGSYEA------AYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHML 612
Query: 358 AIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEG 417
I G DV++G AL++MY +CGSL+ A + + +++S AM+ +A G ++
Sbjct: 613 IIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKA 672
Query: 418 IAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFD--LMAYYDVKPSLKHYTCMV 475
F ++ GF+P +F S L AC+ + + G + L + Y++ + + ++
Sbjct: 673 FELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGYELDTGVGN--ALI 730
Query: 476 DLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
S++G + +A + K+P D + W ++ G +G
Sbjct: 731 SAYSKSGSMTDARKVFDKMP-NRDIMSWNKMIAGYAQNG 768
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 130/282 (46%), Gaps = 11/282 (3%)
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAF-----DEIENI 295
C SL + K IHA + G+ D F+ L+ MY + + + A F ++ +
Sbjct: 92 CTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVFLKMPRRDVISW 151
Query: 296 ENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVH 355
+L+ + GF+ A QLF EM + P T IL+AC S A +E GK++H
Sbjct: 152 NSLISCYAQQGFKKK-----AFQLFEEMQTAGFIPSKITYISILTACCSPAELEYGKKIH 206
Query: 356 AYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGK 415
+ I GY D + +L++MY KC L AR + I D+VS N ML YA + +
Sbjct: 207 SKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYVE 266
Query: 416 EGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMV 475
E I F ++ + G PD +++++ L A + G L + ++ T +
Sbjct: 267 ECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALA 326
Query: 476 DLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
+ R G++ A + ++ D V++ AL+ HG+ E
Sbjct: 327 TMFVRCGDVAGAKQALEAFA-DRDVVVYNALIAALAQHGHYE 367
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 102/214 (47%), Gaps = 14/214 (6%)
Query: 338 ILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPD 397
++ C+ ++ K++HA + G D+ + L++MY KC S+ A + ++ D
Sbjct: 88 LVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVFLKMPRRD 147
Query: 398 LVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFD 457
++S N++++ YA G K+ F + +GF P I+++S L+AC ++ G +
Sbjct: 148 VISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELEYGKKIHS 207
Query: 458 --LMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
+ A Y P +++ ++++ + +L A + I D V + +LG
Sbjct: 208 KIIEAGYQRDPRVQN--SLLNMYGKCEDLPSARQVFSGI-YRRDVVSYNTMLGLYAQKAY 264
Query: 516 LE-----FGQIAADRLIELEPNNTGNYVMLANLF 544
+E FGQ++++ + P + Y+ L + F
Sbjct: 265 VEECIGLFGQMSSEGI----PPDKVTYINLLDAF 294
>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
Length = 1286
Score = 344 bits (883), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 184/513 (35%), Positives = 283/513 (55%), Gaps = 37/513 (7%)
Query: 85 MQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVV-NGLVDVYRRCG 143
+Q L P+ S +L C RL K+ G+ H ++ + F+ N V+ N +V++Y +CG
Sbjct: 78 IQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCG 137
Query: 144 DMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMIS 203
C + +AR +FD+M + +++W ++I+
Sbjct: 138 ---------------------------C----LDDARRMFDEMP----TKDMVTWTALIA 162
Query: 204 GYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQ 263
G+ N+ +A +F +L R G +P FT S+L A + L G ++HA + G Q
Sbjct: 163 GFSQNNRPRDALLLFPQML-RLGFQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQ 221
Query: 264 SDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEM 323
S +VG ALV+MY R + AAQ+AFD + + G +A+ L +M
Sbjct: 222 SSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKM 281
Query: 324 LSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSL 383
+ P +T +LSAC+S+ +E+GK VHA+ I+ G IG L+DMYAK GS+
Sbjct: 282 QRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSI 341
Query: 384 KHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSAC 443
A+ + R+ PD+VS N MLT A HG GKE + F ++L G P+ ISFL L+AC
Sbjct: 342 DDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTAC 401
Query: 444 VHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMW 503
H+G + G +F+LM Y V+P + HY VDLL R G L A FI+++P+ P + +W
Sbjct: 402 SHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVW 461
Query: 504 GALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDR 563
GALLG C H N+E G AA+R EL+P+++G ++L+N++A AGRW D+A+ R+ MK+
Sbjct: 462 GALLGACRMHKNMELGVYAAERAFELDPHDSGPRMLLSNIYASAGRWRDVAKVRKMMKES 521
Query: 564 RMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEI 596
+ K P CSW+E + +H F A+D +H R +EI
Sbjct: 522 GVKKQPACSWVEIENAVHLFVANDETHPRIKEI 554
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 115/433 (26%), Positives = 179/433 (41%), Gaps = 101/433 (23%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG LDDA+++F MP +D +V
Sbjct: 132 MYAKCGCLDDARRMFDEMPTKD------------------------------------MV 155
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+A+I GF+QN +A+ + +M G +PN TLSS+L A L G + H +
Sbjct: 156 TWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHGLDPGTQLHAFC 215
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G+ S+ +V + LVD+Y RCG M +A F K+EVS N +I G+ G A
Sbjct: 216 LKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHAL 275
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
L +M+ R +PT FT+ SVL A
Sbjct: 276 HLLWKMQ------------------------------------RKNFQPTHFTYSSVLSA 299
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA + +L +GK +HA I GL+ F+G L++MY + + A+ FD +
Sbjct: 300 CASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRL-------- 351
Query: 301 KMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSSLA 346
+P+V +WN M F +ML + + P+ + +L+ACS
Sbjct: 352 ------VKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSG 405
Query: 347 TMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHA-RLAYKRISTPDLVSQNAML 405
++ G + + DV VD+ + G L A R + P A+L
Sbjct: 406 LLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALL 465
Query: 406 TAYAMHGHGKEGI 418
A MH + + G+
Sbjct: 466 GACRMHKNMELGV 478
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 161/319 (50%), Gaps = 10/319 (3%)
Query: 220 DLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHA-LAIALGLQSDTFVGGALVEMYCR 278
DL+ R + P + +L C + + +G+ +HA L + L + + +V MY +
Sbjct: 76 DLIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAK 135
Query: 279 YQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGII 338
L A+ FDE+ + + GF N +A+ LF +ML L P+ +T+ +
Sbjct: 136 CGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSL 195
Query: 339 LSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDL 398
L A S ++ G Q+HA+ ++ GY S V++G+ALVDMYA+CG + A+LA+ + T
Sbjct: 196 LKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSE 255
Query: 399 VSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDL 458
VS NA+++ +A G G+ + ++ F+P H ++ S LSAC G+++ G
Sbjct: 256 VSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAH 315
Query: 459 MAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEF 518
M +K ++D+ ++AG + +A ++ + PD V W +L GC HG
Sbjct: 316 MIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRL-VKPDVVSWNTMLTGCAQHG---L 371
Query: 519 GQIAADRL-----IELEPN 532
G+ DR I +EPN
Sbjct: 372 GKETLDRFEQMLRIGIEPN 390
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 121/266 (45%), Gaps = 23/266 (8%)
Query: 253 IHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVY 312
IHA A +D+ V +C +QD ++LL K + DG +Y
Sbjct: 29 IHAPAAPFSDSNDSEVEDGDAASFCVFQD--------------KDLLRKSQSDG-GTGLY 73
Query: 313 TWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGY-DSDVHIGT 371
+ +Q S L PD +L C+ L +E+G+ VHA+ + + D+ + +
Sbjct: 74 ALDLIQRGS------LVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQN 127
Query: 372 ALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRP 431
+V+MYAKCG L AR + + T D+V+ A++ ++ + ++ + F ++L GF+P
Sbjct: 128 IIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQP 187
Query: 432 DHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFI 491
+H + S L A + G++ Y + S+ + +VD+ +R G + A
Sbjct: 188 NHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAF 247
Query: 492 KKIPMAPDSVMWGALLGGCVSHGNLE 517
+P + V W AL+ G G E
Sbjct: 248 DGMPTKSE-VSWNALISGHARKGEGE 272
>gi|356501823|ref|XP_003519723.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 727
Score = 344 bits (883), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 184/597 (30%), Positives = 321/597 (53%), Gaps = 73/597 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
M+ KCGS++DA+++F+ MP+RD L
Sbjct: 176 MFAKCGSVEDARRMFEEMPDRD------------------------------------LA 199
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A+I G NG EA+ + +M++EGL P++ ++S+LPAC RL+ + LG
Sbjct: 200 SWTALICGTMWNGECLEALLLFRKMRSEGLMPDSVIVASILPACGRLEAVKLGMALQVCA 259
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R+GF S+ +V N ++D+Y +C G+ EA
Sbjct: 260 VRSGFESDLYVSNAVIDMYCKC-------------------------------GDPLEAH 288
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+F M V ++SW+++I+GY N LY E++ ++ ++ G+ + SVL A
Sbjct: 289 RVFSHM----VYSDVVSWSTLIAGYSQNCLYQESYKLYIGMI-NVGLATNAIVATSVLPA 343
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
+ L++GKE+H + GL SD VG AL+ MY + A+ F+ + + ++
Sbjct: 344 LGKLELLKQGKEMHNFVLKEGLMSDVVVGSALIVMYANCGSIKEAESIFECTSDKDIMVW 403
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G+ +A F + + P+ TV IL C+ + + +GK++H Y +
Sbjct: 404 NSMIVGYNLVGDFESAFFTFRRIWGAEHRPNFITVVSILPICTQMGALRQGKEIHGYVTK 463
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
G +V +G +L+DMY+KCG L+ +K++ ++ + N M++A HG G++G+A
Sbjct: 464 SGLGLNVSVGNSLIDMYSKCGFLELGEKVFKQMMVRNVTTYNTMISACGSHGQGEKGLAF 523
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLS 479
+ ++ G RP+ ++F+S LSAC HAG + G ++ M Y ++P+++HY+CMVDL+
Sbjct: 524 YEQMKEEGNRPNKVTFISLLSACSHAGLLDRGWLLYNSMINDYGIEPNMEHYSCMVDLIG 583
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
RAG+L AY+FI ++PM PD+ ++G+LLG C H +E ++ A+R+++L+ +++G+YV+
Sbjct: 584 RAGDLDGAYKFITRMPMTPDANVFGSLLGACRLHNKVELTELLAERILQLKADDSGHYVL 643
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEI 596
L+NL+A RW D+++ R +KD+ + K PG SWI+ I+ F A+ H +I
Sbjct: 644 LSNLYASGKRWEDMSKVRSMIKDKGLEKKPGSSWIQVGHCIYVFHATSAFHPAFAKI 700
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 171/365 (46%), Gaps = 9/365 (2%)
Query: 170 YCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEP 229
Y G++ A F + H + II+WN+++ G V + +A + +L + G+ P
Sbjct: 77 YVNFGSLQHAFLTFRALPH----KPIIAWNAILRGLVAVGHFTKAIHFYHSML-QHGVTP 131
Query: 230 TSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAF 289
++T+ VL AC+ +++L+ G+ +H + +++ +V A+++M+ + + A+ F
Sbjct: 132 DNYTYPLVLKACSSLHALQLGRWVHE-TMHGKTKANVYVQCAVIDMFAKCGSVEDARRMF 190
Query: 290 DEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATME 349
+E+ + + G N A+ LF +M S L PD V IL AC L ++
Sbjct: 191 EEMPDRDLASWTALICGTMWNGECLEALLLFRKMRSEGLMPDSVIVASILPACGRLEAVK 250
Query: 350 RGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYA 409
G + A+R G++SD+++ A++DMY KCG A + + D+VS + ++ Y+
Sbjct: 251 LGMALQVCAVRSGFESDLYVSNAVIDMYCKCGDPLEAHRVFSHMVYSDVVSWSTLIAGYS 310
Query: 410 MHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLK 469
+ +E + ++ G + I S L A +K G E + + + +
Sbjct: 311 QNCLYQESYKLYIGMINVGLATNAIVATSVLPALGKLELLKQGKEMHNFVLKEGLMSDVV 370
Query: 470 HYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRL--I 527
+ ++ + + G + EA E I + D ++W +++ G G+ E R+
Sbjct: 371 VGSALIVMYANCGSIKEA-ESIFECTSDKDIMVWNSMIVGYNLVGDFESAFFTFRRIWGA 429
Query: 528 ELEPN 532
E PN
Sbjct: 430 EHRPN 434
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 124/270 (45%), Gaps = 9/270 (3%)
Query: 246 SLRKGKEIHALAIALGL------QSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
+L + + +HAL + LG S +F LV +Y + L A + F + + +
Sbjct: 42 NLHEARTLHALLLVLGFFQPTCPHSSSF-ASQLVNVYVNFGSLQHAFLTFRALPHKPIIA 100
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
G + A+ + ML +TPD YT ++L ACSSL ++ G+ VH +
Sbjct: 101 WNAILRGLVAVGHFTKAIHFYHSMLQHGVTPDNYTYPLVLKACSSLHALQLGRWVHE-TM 159
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
++V++ A++DM+AKCGS++ AR ++ + DL S A++ +G E +
Sbjct: 160 HGKTKANVYVQCAVIDMFAKCGSVEDARRMFEEMPDRDLASWTALICGTMWNGECLEALL 219
Query: 420 HFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLS 479
FR++ + G PD + S L AC ++K G + L ++D+
Sbjct: 220 LFRKMRSEGLMPDSVIVASILPACGRLEAVKLGMALQVCAVRSGFESDLYVSNAVIDMYC 279
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
+ G+ EA+ + + D V W L+ G
Sbjct: 280 KCGDPLEAHRVFSHM-VYSDVVSWSTLIAG 308
>gi|449508565|ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330-like [Cucumis
sativus]
Length = 712
Score = 344 bits (883), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 180/548 (32%), Positives = 307/548 (56%), Gaps = 19/548 (3%)
Query: 57 PNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEF 116
P ++W +VI +T +G +++G M A GL P+ SVL +CA L L+LG+
Sbjct: 69 PPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESL 128
Query: 117 HGYITRNGFMSNPFVVNGLVDVYRRCGDM-------LSALKIFSKFSIKNEVSCNTIIVG 169
HGYI R G + + N L+++Y + + L A ++F + + + S T+ V
Sbjct: 129 HGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTR-SVRTVSV- 186
Query: 170 YCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEP 229
E+ R++F+ M ++ ++SWN++I+G N LY+E M R++ + ++P
Sbjct: 187 LSEDS----VRKIFEMMP----EKDLVSWNTIIAGNARNGLYEETLRMIREMGGAN-LKP 237
Query: 230 TSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAF 289
SFT SVL A+ + +GKEIH +I GL +D +V +L++MY + + + F
Sbjct: 238 DSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVF 297
Query: 290 DEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATME 349
+ + + G N ++ F +ML + P Y+ I+ AC+ L T+
Sbjct: 298 TLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLH 357
Query: 350 RGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYA 409
GKQ+H Y R G+D ++ I ++LVDMYAKCG+++ A+ + R+ D+VS AM+ A
Sbjct: 358 LGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCA 417
Query: 410 MHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSL 468
+HG + I F ++ G +P+H++F++ L+AC H G + ++F+ M + + P +
Sbjct: 418 LHGQAPDAIELFEQMETEGIKPNHVAFMAVLTACSHGGLVDEAWKYFNSMTRDFGIAPGV 477
Query: 469 KHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIE 528
+HY + DLL RAG L EAY+FI + + P +W LL C H N++ + A+R++E
Sbjct: 478 EHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSACRVHXNIDMAEKVANRILE 537
Query: 529 LEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDR 588
++PNNTG Y++LAN+++ A RW + A+ R M+ + K+P CSWIE +++++ F A D
Sbjct: 538 VDPNNTGAYILLANIYSAARRWKEAAKWRASMRRIGIRKTPACSWIEVKNKVYAFMAGDE 597
Query: 589 SHDRSEEI 596
SH E+I
Sbjct: 598 SHPCYEKI 605
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 124/237 (52%), Gaps = 36/237 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC + D+ +VF ++ ERD +SWNS++ C NGL E L +M
Sbjct: 283 MYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQM----------- 331
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+ A+ ++P + + SS++PACA L L LGK+ HGYI
Sbjct: 332 ------------------------LMAK-IKPKSYSFSSIMPACAHLTTLHLGKQLHGYI 366
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
TRNGF N F+ + LVD+Y +CG++ +A +IF + +++ VS +I+G +G +A
Sbjct: 367 TRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAI 426
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
ELF+QME G++ +++ ++++ L DEA+ F + GI P + +V
Sbjct: 427 ELFEQMETEGIKPNHVAFMAVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAV 483
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/381 (25%), Positives = 168/381 (44%), Gaps = 73/381 (19%)
Query: 7 SLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVI 66
S D +K+F+MMPE+D VSWN+++ A NGL E L
Sbjct: 188 SEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLR---------------------- 225
Query: 67 GGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFM 126
M+ M L+P++ TLSSVLP A +S GKE HG R G
Sbjct: 226 --------------MIREMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLD 271
Query: 127 SNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQM 186
++ +V + L+D+Y +C + + ++F+ + ++ +S N+II G +NG
Sbjct: 272 ADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNG------------ 319
Query: 187 EHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNS 246
L+DE FR +LM I+P S++F S++ ACA + +
Sbjct: 320 -----------------------LFDEGLRFFRQMLMAK-IKPKSYSFSSIMPACAHLTT 355
Query: 247 LRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDG 306
L GK++H G + F+ +LV+MY + ++ A+ FD + + + G
Sbjct: 356 LHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMG 415
Query: 307 FEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG-KQVHAYAIRCGYDS 365
+ +A++LF +M + + P+ +L+ACS ++ K ++ G
Sbjct: 416 CALHGQAPDAIELFEQMETEGIKPNHVAFMAVLTACSHGGLVDEAWKYFNSMTRDFGIAP 475
Query: 366 DVHIGTALVDMYAKCGSLKHA 386
V A+ D+ + G L+ A
Sbjct: 476 GVEHYAAVSDLLGRAGRLEEA 496
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 60/117 (51%), Gaps = 2/117 (1%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG++ AK++F M RD VSW +++ CA +G +A+E E+M + + PN V
Sbjct: 384 MYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMET-EGIKPNHV 442
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEF 116
++ AV+ + G +EA M + G+ P ++V R +L +F
Sbjct: 443 AFMAVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDF 499
>gi|296087599|emb|CBI34855.3| unnamed protein product [Vitis vinifera]
Length = 956
Score = 344 bits (882), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 208/657 (31%), Positives = 344/657 (52%), Gaps = 73/657 (11%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPN-- 58
+Y K G A +F MPE+D +SW++++ A N EAL M E PN
Sbjct: 215 LYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFE-PNSV 273
Query: 59 -----------------------------LVSWSAVIGGFTQNGYDEEAIGMLFRMQAEG 89
+VSW A++ G+ QNG +++G+ M ++G
Sbjct: 274 TVVSALQACAVSRNLEEGKKIHKIAVWKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDG 333
Query: 90 LEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSAL 149
++P+A + +L A + L HGY+ R+GF SN FV L+++Y +CG + A+
Sbjct: 334 IQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAV 393
Query: 150 KIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIIS-WNSMISGYVDN 208
K+F +++ V +++I Y +G EA E+FDQM + V +GI S + + V
Sbjct: 394 KLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQM--IQVMQGITSCYQISMQPQVQP 451
Query: 209 SL-------------YDEAFSM---FRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKE 252
L +AF M FR L I PT + F + ADM+
Sbjct: 452 PLAITSCTLATHIPWKVKAFYMRAHFRWLGHFWEIFPT-YPFQA-----ADMSK------ 499
Query: 253 IHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVY 312
+ A GLQ D+ + MY + + AA + F++I N + L + GF +
Sbjct: 500 --SNIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGR 557
Query: 313 TWNAMQLFSEMLSLDLTPD-------IYTVGIILSACSSLATMERGKQVHAYAIRCGYDS 365
++++L+S+M+ L PD ++ +L AC +L + +G+ H+Y I+ G++
Sbjct: 558 FLSSLELYSKMMEKGLKPDNSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEF 617
Query: 366 DVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRIL 425
D+ + TA++DMY+KCGSL AR + + DLV +AM+ +Y +HGHG++ I F +++
Sbjct: 618 DILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMV 677
Query: 426 ASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGEL 484
+G RP H++F LSAC H+G ++ G +F LM + + L +Y CMVDLL RAG+L
Sbjct: 678 KAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQL 737
Query: 485 GEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLF 544
EA + I+ +P+ PD+ +WG+LLG C H NL+ + AD L L+P + G +V+L+N++
Sbjct: 738 SEAVDLIENMPVEPDASIWGSLLGACRIHNNLDLAEKIADHLFHLDPVHAGYHVLLSNIY 797
Query: 545 AYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
A RW+++ + R+ M R +K G S +E +++HKF DRSH + E++Y ++
Sbjct: 798 AAKSRWNEVEKVRKMMARRGANKIQGFSLVEYDNQVHKFGVGDRSHPQWEKLYAKLE 854
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 123/459 (26%), Positives = 206/459 (44%), Gaps = 106/459 (23%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KC SL A+KVF P PN+
Sbjct: 45 LYAKCASLQAARKVFDETPH------------------------------------PNVH 68
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQ-AEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
W++ + + + EE + + M G P+ T+ L ACA L+ L LGK HG+
Sbjct: 69 LWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGF 128
Query: 120 ITRNGFM-SNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
+N + S+ FV + LV++Y +CG M ALK+F +F + V +++ GY +N + E
Sbjct: 129 AKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEE 188
Query: 179 ARELFDQMEHLGV--------------------------------QRGIISWNSMISGYV 206
A LF QM + ++ +ISW++MI+ Y
Sbjct: 189 ALALFSQMVMMDCFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYA 248
Query: 207 DNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDT 266
+N +EA ++F +++ + EP S T S L ACA +L +GK+IH +A+
Sbjct: 249 NNEAANEALNLFHEMIEKR-FEPNSVTVVSALQACAVSRNLEEGKKIHKIAV-------- 299
Query: 267 FVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSL 326
++D+V+ G+ N + +M +F MLS
Sbjct: 300 ------------WKDVVSWVALL---------------SGYAQNGMAYKSMGVFRNMLSD 332
Query: 327 DLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHA 386
+ PD V IL+A S L ++ +H Y +R G++S+V +G +L+++Y+KCGSL A
Sbjct: 333 GIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDA 392
Query: 387 RLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRIL 425
+K + D+V ++M+ AY +HG G E + F +++
Sbjct: 393 VKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMI 431
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 90/361 (24%), Positives = 158/361 (43%), Gaps = 52/361 (14%)
Query: 135 LVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVG-----YCENGNVAEARELFDQMEHL 189
LVD+++ C + S ++ S+ K + +T Y + ++ AR++FD+ H
Sbjct: 7 LVDLFQACNNGRSVSQLHSQV-FKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHP 65
Query: 190 GVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRK 249
V WNS + Y ++E +F ++ G P +FT L ACA + L
Sbjct: 66 NVHL----WNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLEL 121
Query: 250 GKEIHALAIALG-LQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFE 308
GK IH A + SD FVG ALVE+Y + + A F+E + + +L G++
Sbjct: 122 GKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQ 181
Query: 309 PNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVH 368
N A+ LFS+M+ +D +D D+
Sbjct: 182 QNNDPEEALALFSQMVMMDC----------------------------------FDGDLP 207
Query: 369 IGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASG 428
+ +L+++YAK G K A + ++ D++S + M+ YA + E + F ++
Sbjct: 208 LVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKR 267
Query: 429 FRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAY 488
F P+ ++ +SAL AC + +++ G + + + DV V LLS + G AY
Sbjct: 268 FEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKDV-------VSWVALLSGYAQNGMAY 320
Query: 489 E 489
+
Sbjct: 321 K 321
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 128/293 (43%), Gaps = 32/293 (10%)
Query: 245 NSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKE 304
N+ R ++H+ G+ DTF L +Y + L AA+ FDE +
Sbjct: 15 NNGRSVSQLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPH---------- 64
Query: 305 DGFEPNVYTWNA--------------MQLFSEML-SLDLTPDIYTVGIILSACSSLATME 349
PNV+ WN+ ++LF M+ + PD +T+ I L AC+ L +E
Sbjct: 65 ----PNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLE 120
Query: 350 RGKQVHAYAIRCG-YDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAY 408
GK +H +A + SD+ +G+ALV++Y+KCG + A ++ PD V +M+T Y
Sbjct: 121 LGKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGY 180
Query: 409 AMHGHGKEGIAHFRR-ILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPS 467
+ +E +A F + ++ F D S L+ G K + F M DV
Sbjct: 181 QQNNDPEEALALFSQMVMMDCFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISW 240
Query: 468 LKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQ 520
C + + L +E I+K P+SV + L C NLE G+
Sbjct: 241 STMIACYANNEAANEALNLFHEMIEK-RFEPNSVTVVSALQACAVSRNLEEGK 292
>gi|356555170|ref|XP_003545909.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 741
Score = 344 bits (882), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 196/581 (33%), Positives = 297/581 (51%), Gaps = 72/581 (12%)
Query: 57 PNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEF 116
P+ + S +I FT G EAI + ++A G++P+ +V AC S KE
Sbjct: 95 PDPTTCSTLISAFTTRGLPNEAIRLYASLRARGIKPHNSVFLTVAKACGASGDASRVKEV 154
Query: 117 HGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNV 176
H R G MS+ F+ N L+ Y +C C G
Sbjct: 155 HDDAIRCGMMSDAFLGNALIHAYGKCK---------------------------CVEG-- 185
Query: 177 AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGS 236
AR +FD + V + ++SW SM S YV+ L ++F ++ +G++P S T S
Sbjct: 186 --ARRVFDDL----VVKDVVSWTSMSSCYVNCGLPRLGLAVFCEMGW-NGVKPNSVTLSS 238
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFD------ 290
+L AC+++ L+ G+ IH A+ G+ + FV ALV +Y R + A++ FD
Sbjct: 239 ILPACSELKDLKSGRAIHGFAVRHGMIENVFVCSALVSLYARCLSVKQARLVFDLMPHRD 298
Query: 291 ---------------EIENIENLLGKMKEDGFEPNVYTWNAM--------------QLFS 321
E + L +M G E + TWNA+ ++
Sbjct: 299 VVSWNGVLTAYFTNREYDKGLALFSQMSSKGVEADEATWNAVIGGCMENGQTEKAVEMLR 358
Query: 322 EMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCG 381
+M +L P+ T+ L ACS L ++ GK+VH Y R D+ TALV MYAKCG
Sbjct: 359 KMQNLGFKPNQITISSFLPACSILESLRMGKEVHCYVFRHWLIGDLTTMTALVYMYAKCG 418
Query: 382 SLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALS 441
L +R + I D+V+ N M+ A AMHG+G+E + F +L SG +P+ ++F LS
Sbjct: 419 DLNLSRNVFDMICRKDVVAWNTMIIANAMHGNGREVLLLFESMLQSGIKPNSVTFTGVLS 478
Query: 442 ACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDS 500
C H+ ++ G + F+ M + V+P HY CMVD+ SRAG L EAYEFI+++PM P +
Sbjct: 479 GCSHSRLVEEGLQIFNSMGRDHLVEPDANHYACMVDVFSRAGRLHEAYEFIQRMPMEPTA 538
Query: 501 VMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKM 560
WGALLG C + N+E +I+A++L E+EPNN GNYV L N+ A WS+ + R M
Sbjct: 539 SAWGALLGACRVYKNVELAKISANKLFEIEPNNPGNYVSLFNILVTAKLWSEASEARILM 598
Query: 561 KDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
K+R + K+PGCSW++ D +H F D+++ S++IY +D
Sbjct: 599 KERGITKTPGCSWLQVGDRVHTFVVGDKNNMESDKIYNFLD 639
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 119/415 (28%), Positives = 184/415 (44%), Gaps = 53/415 (12%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
YGKC ++ A++VF + +D VSW S +++C N C
Sbjct: 177 YGKCKCVEGARRVFDDLVVKDVVSWTS-MSSCYVN--------C---------------- 211
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
G + + M G++PN+ TLSS+LPAC+ L+ L G+ HG+
Sbjct: 212 -----------GLPRLGLAVFCEMGWNGVKPNSVTLSSILPACSELKDLKSGRAIHGFAV 260
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
R+G + N FV + LV +Y RC + A +F ++ VS N ++ Y N +
Sbjct: 261 RHGMIENVFVCSALVSLYARCLSVKQARLVFDLMPHRDVVSWNGVLTAYFTNREYDKGLA 320
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
LF QM GV+ +WN++I G ++N ++A M R + G +P T S L AC
Sbjct: 321 LFSQMSSKGVEADEATWNAVIGGCMENGQTEKAVEMLRK-MQNLGFKPNQITISSFLPAC 379
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI-------EN 294
+ + SLR GKE+H L D ALV MY + DL ++ FD I N
Sbjct: 380 SILESLRMGKEVHCYVFRHWLIGDLTTMTALVYMYAKCGDLNLSRNVFDMICRKDVVAWN 439
Query: 295 IENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV 354
+ M +G E + LF ML + P+ T +LS CS +E G Q+
Sbjct: 440 TMIIANAMHGNGRE-------VLLLFESMLQSGIKPNSVTFTGVLSGCSHSRLVEEGLQI 492
Query: 355 HAYAIRCG-YDSDVHIGTALVDMYAKCGSLKHARLAYKRIST-PDLVSQNAMLTA 407
R + D + +VD++++ G L A +R+ P + A+L A
Sbjct: 493 FNSMGRDHLVEPDANHYACMVDVFSRAGRLHEAYEFIQRMPMEPTASAWGALLGA 547
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 93/298 (31%), Positives = 161/298 (54%), Gaps = 8/298 (2%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y +C S+ A+ VF +MP RD VSWN V+TA N + L +MSS E +
Sbjct: 277 LYARCLSVKQARLVFDLMPHRDVVSWNGVLTAYFTNREYDKGLALFSQMSSKGVEA-DEA 335
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+AVIGG +NG E+A+ ML +MQ G +PN T+SS LPAC+ L+ L +GKE H Y+
Sbjct: 336 TWNAVIGGCMENGQTEKAVEMLRKMQNLGFKPNQITISSFLPACSILESLRMGKEVHCYV 395
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R+ + + + LV +Y +CGD+ + +F K+ V+ NT+I+ +GN E
Sbjct: 396 FRHWLIGDLTTMTALVYMYAKCGDLNLSRNVFDMICRKDVVAWNTMIIANAMHGNGREVL 455
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LF+ M G++ +++ ++SG + L +E +F + +EP + + ++
Sbjct: 456 LLFESMLQSGIKPNSVTFTGVLSGCSHSRLVEEGLQIFNSMGRDHLVEPDANHYACMV-- 513
Query: 241 CADMNSLRKGK--EIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
D+ S R G+ E + + ++ GAL+ Y+++ A+++ +++ IE
Sbjct: 514 --DVFS-RAGRLHEAYEFIQRMPMEPTASAWGALLGACRVYKNVELAKISANKLFEIE 568
Score = 43.1 bits (100), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 59/140 (42%), Gaps = 6/140 (4%)
Query: 324 LSLDLTPDIYTVGIIL----SACSSLATMERGKQVHAYAIRCGYDSDV--HIGTALVDMY 377
L +D + ++ G +L S S + KQ+ + + +++ H+G L+
Sbjct: 17 LEIDHSRELIIFGFVLPPFFSITHSTQSSSIWKQLTSTKVAPSVPTNIPSHLGLRLLKAA 76
Query: 378 AKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFL 437
G + A+ + I PD + + +++A+ G E I + + A G +P + FL
Sbjct: 77 LNVGDFRRAQQLFDNIPQPDPTTCSTLISAFTTRGLPNEAIRLYASLRARGIKPHNSVFL 136
Query: 438 SALSACVHAGSIKTGSEFFD 457
+ AC +G E D
Sbjct: 137 TVAKACGASGDASRVKEVHD 156
>gi|147772562|emb|CAN67343.1| hypothetical protein VITISV_038220 [Vitis vinifera]
Length = 732
Score = 344 bits (882), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 190/634 (29%), Positives = 330/634 (52%), Gaps = 70/634 (11%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALE--------CLERMSSLD 53
Y KCG + ++F M E + V VV++ + +LE LE L R + +D
Sbjct: 113 YTKCGRSXVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMD 172
Query: 54 NET--------------------------PNLVSWSAVIGGFTQNGYDEEAIGMLFRMQA 87
N++SW+ +I G+ QN +D EA+ + M
Sbjct: 173 VSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNR 232
Query: 88 EGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLS 147
G +P+ +SVL +C L+ L G++ H Y + SN FV NGL+D+Y + +
Sbjct: 233 LGWKPDGFACTSVLTSCGSLEALEQGRQVHAYTIKANLESNEFVKNGLIDMYAKSNLL-- 290
Query: 148 ALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVD 207
+A+++FD M ++ +IS+N+MI GY
Sbjct: 291 -----------------------------XDAKKVFDVM----AEQNVISYNAMIEGYSS 317
Query: 208 NSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTF 267
EA +F ++ +R P+ TF S+L A + +L K+IH L I G+ D F
Sbjct: 318 QEKLSEALELFHEMRVR-LFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKXGVSLDLF 376
Query: 268 VGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLD 327
G AL+++Y + + A+ F+E+ + ++ G+ ++ A++L+S +
Sbjct: 377 AGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSR 436
Query: 328 LTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHAR 387
P+ +T +++A S+LA++ G+Q H ++ G D + ALVDMYAKCGS++ AR
Sbjct: 437 QKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEAR 496
Query: 388 LAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAG 447
+ D+V N+M++ +A HG +E + FR ++ G +P++++F++ LSAC HAG
Sbjct: 497 KMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAG 556
Query: 448 SIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALL 507
++ G F+ M + +KP +HY C+V LL R+G+L EA EFI+K+P+ P +++W +LL
Sbjct: 557 XVEDGLNHFNSMPGFGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLL 616
Query: 508 GGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHK 567
C GN+E G+ AA+ I +P ++G+Y++L+N+FA G W+D+ + R +M + K
Sbjct: 617 SACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFASKGMWADVKKVRDRMDSSEVVK 676
Query: 568 SPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
PG SWIE ++++ F A +H ++ I +++D
Sbjct: 677 EPGRSWIEVNNKVNVFIARXTTHREADMIGSVLD 710
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 120/443 (27%), Positives = 206/443 (46%), Gaps = 40/443 (9%)
Query: 73 GYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFV 131
GY EEA+ + +Q + G PN L+SV+ AC +L + G + HG++ R+GF + +V
Sbjct: 15 GYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYV 74
Query: 132 VNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGV 191
L+D Y + GB+ A +F + K V+ TII GY + G + ELF QM V
Sbjct: 75 GTSLIDFYSKNGBIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQMRETNV 134
Query: 192 QRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGK 251
P + SVL AC+ + L GK
Sbjct: 135 V------------------------------------PDRYVVSSVLSACSMLEFLEGGK 158
Query: 252 EIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG-KMKEDGFEPN 310
+IHA + G + D V L++ Y + + A + FD++ ++N++ G+ N
Sbjct: 159 QIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMV-VKNIISWTTMISGYMQN 217
Query: 311 VYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIG 370
+ W AM+LF EM L PD + +L++C SL +E+G+QVHAY I+ +S+ +
Sbjct: 218 SFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSLEALEQGRQVHAYTIKANLESNEFVK 277
Query: 371 TALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFR 430
L+DMYAK L A+ + ++ +++S NAM+ Y+ E + F + F
Sbjct: 278 NGLIDMYAKSNLLXDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFP 337
Query: 431 PDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEF 490
P ++F+S L +++ + L+ V L + ++D+ S+ + +A
Sbjct: 338 PSLLTFVSLLGVSASLFALELSKQIHGLIIKXGVSLDLFAGSALIDVYSKCSYVKDARHV 397
Query: 491 IKKIPMAPDSVMWGALLGGCVSH 513
+++ D V+W A+ G H
Sbjct: 398 FEEMN-EKDIVVWNAMFFGYTQH 419
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 162/352 (46%), Gaps = 42/352 (11%)
Query: 207 DNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDT 266
D +EA +F DL + G P F SV+ AC + + KG ++H + G D
Sbjct: 13 DEGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDV 72
Query: 267 FVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSL 326
+VG +L++ Y + B+ A++ FD++ + G+ + +++LF++M
Sbjct: 73 YVGTSLIDFYSKNGBIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQMRET 132
Query: 327 DLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHA 386
++ PD Y V +LSACS L +E GKQ+HAY +R G + DV + L+D Y KC +K
Sbjct: 133 NVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAG 192
Query: 387 RLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSAC--- 443
R + ++ +++S M++ Y + E + F + G++PD + S L++C
Sbjct: 193 RKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSL 252
Query: 444 --------VHAGSIKTGSE------------------------FFDLMAYYDVKPSLKHY 471
VHA +IK E FD+MA +V Y
Sbjct: 253 EALEQGRQVHAYTIKANLESNEFVKNGLIDMYAKSNLLXDAKKVFDVMAEQNVIS----Y 308
Query: 472 TCMVDLLSRAGELGEAYEFIK--KIPMAPDSVM-WGALLGGCVSHGNLEFGQ 520
M++ S +L EA E ++ + P S++ + +LLG S LE +
Sbjct: 309 NAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSK 360
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 101/436 (23%), Positives = 175/436 (40%), Gaps = 109/436 (25%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K L DAKKVF +M E++ +S+N+++ E E++S
Sbjct: 283 MYAKSNLLXDAKKVFDVMAEQNVISYNAMI----------EGYSSQEKLS---------- 322
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
EA+ + M+ P+ T S+L A L L L K+ HG I
Sbjct: 323 ----------------EALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLI 366
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G + F + L+DVY +C + A +F + + K+ V N + GY ++ EA
Sbjct: 367 IKXGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEAL 426
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+L+ ++ FS + P FTF +++ A
Sbjct: 427 KLYSTLQ---------------------------FSRQK---------PNEFTFAALITA 450
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
+++ SLR G++ H + +GL FV ALV+MY + + A+
Sbjct: 451 ASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEAR-------------- 496
Query: 301 KMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSSLA 346
KM +V WN+M +F EM+ + P+ T +LSACS
Sbjct: 497 KMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAG 556
Query: 347 TMERG----KQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST-PDLVSQ 401
+E G + + I+ G + H +V + + G L A+ +++ P +
Sbjct: 557 XVEDGLNHFNSMPGFGIKPGTE---HYA-CVVSLLGRSGKLFEAKEFIEKMPIEPAAIVW 612
Query: 402 NAMLTAYAMHGHGKEG 417
++L+A + G+ + G
Sbjct: 613 RSLLSACRIAGNVELG 628
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 130/291 (44%), Gaps = 69/291 (23%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KC + DA+ VF+ M E+D V WN
Sbjct: 384 VYSKCSYVKDARHVFEEMNEKDIVVWN--------------------------------- 410
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
A+ G+TQ+ +EEA+ + +Q +PN T ++++ A + L L G++FH +
Sbjct: 411 ---AMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQL 467
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSC-NTIIVGYCENGNVAEA 179
+ G PFV N LVD+Y +CG + A K+F+ SI +V C N++I + ++G EA
Sbjct: 468 VKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNS-SIWRDVVCWNSMISTHAQHGEAEEA 526
Query: 180 RELFDQMEHLGVQRGIISWNSMIS-----GYVDNSLY-------------DEAFSMFRDL 221
+F +M G+Q +++ +++S G V++ L E ++ L
Sbjct: 527 LGMFREMMKEGIQPNYVTFVAVLSACSHAGXVEDGLNHFNSMPGFGIKPGTEHYACVVSL 586
Query: 222 LMRDG-------------IEPTSFTFGSVLIACADMNSLRKGKEIHALAIA 259
L R G IEP + + S+L AC ++ GK +AI+
Sbjct: 587 LGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRIAGNVELGKYAAEMAIS 637
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 82/167 (49%), Gaps = 12/167 (7%)
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLD-LTPDIYTVGIILSACSSLATMERGKQVHAYA 358
G K E Y+ A+ +F ++ P+ + + ++ AC+ L +E+G Q+H +
Sbjct: 4 GMQKTKDMEDEGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFV 63
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGI 418
+R G+D DV++GT+L+D Y+K G ++ ARL + ++ V+ ++ Y G +
Sbjct: 64 VRSGFDQDVYVGTSLIDFYSKNGBIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSL 123
Query: 419 AHFRRILASGFRPDHISFLSALSAC-----------VHAGSIKTGSE 454
F ++ + PD S LSAC +HA ++ G+E
Sbjct: 124 ELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTE 170
>gi|357440933|ref|XP_003590744.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479792|gb|AES60995.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 795
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 217/663 (32%), Positives = 340/663 (51%), Gaps = 80/663 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETP--- 57
+Y K ++ A+K+F +P+ D V+ ++++A +++G V A L N TP
Sbjct: 49 IYCKSSNITYARKLFDKIPKPDIVARTTLLSAYSSSGNVKLA-------QQLFNATPLTI 101
Query: 58 -NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARL-QKLSLGKE 115
+ VS++A+I ++ A+ + +M+ G P+ T SSVL A + + + +
Sbjct: 102 RDTVSYNAMITAYSHGNDGHAALNLFVQMKRYGFLPDPFTFSSVLSALSLIADEERHCQM 161
Query: 116 FHGYITRNGFMSNPFVVNGLVDVYRRCGD---------MLSALKIFSKFSIKNEV---SC 163
H + + G + P V N L+ Y C M SA K+F + + KN++ S
Sbjct: 162 LHCEVIKLGTLLIPSVTNALLSCYVCCASSPLVKSSQLMASARKVFDE-TPKNQIYEPSW 220
Query: 164 NTIIVGYCENGNVAEARELFDQMEHLGVQRGI-ISWNSMISGYVDNSLYDEAFSMFRDLL 222
T+I GY N ++ AREL D G+ I ++WN+MISGYV LY+EAF FR +
Sbjct: 221 TTMIAGYVRNDDLVAARELLD-----GLTYPIDVAWNAMISGYVRRGLYEEAFDTFRRM- 274
Query: 223 MRDGIEPTSFTFGSVLIACADMNS----LRKGKEIHALAIALGLQ-SDTFV---GGALVE 274
GI+ +T+ S++ AC N G+++H + ++ S FV AL+
Sbjct: 275 HSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYILRTVVEPSHHFVLSVNNALIT 334
Query: 275 MYCRYQDLVAAQMAFDE---------------------IENIENLLGKMKEDGFEPNVYT 313
Y +Y ++ A+ FD+ IE ++ +M E NV T
Sbjct: 335 FYTKYDRMIEARRVFDKMPVRDIISWNAVLSGYVNAQRIEEANSIFSEMPER----NVLT 390
Query: 314 WNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
W M +LF++M S L P Y ++ACS L +++ G+Q+H+ I
Sbjct: 391 WTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGSLDNGQQIHSQVI 450
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
R G+DS + G AL+ MY++CG ++ A + + D VS NAM+ A A HGHG + I
Sbjct: 451 RLGHDSGLSAGNALITMYSRCGVVESAESVFLTMPYVDSVSWNAMIAALAQHGHGVKAIE 510
Query: 420 HFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMVDLL 478
F +++ PD I+FL+ L+AC HAG IK G +FD M Y + P HY ++DLL
Sbjct: 511 LFEQMMKEDILPDRITFLTILTACNHAGLIKEGRHYFDTMCTRYGITPGEDHYARLIDLL 570
Query: 479 SRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYV 538
RAG +A IK +P + +W ALL GC HGN+E G AADRL+EL P G Y+
Sbjct: 571 CRAGMFLKAQSVIKSMPFEAGAPIWEALLAGCRIHGNMELGIQAADRLLELIPGQDGTYI 630
Query: 539 MLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYT 598
+L+N++A G+W ++AR R M++R + K PGCSW+E + +H F D H + +YT
Sbjct: 631 ILSNMYAALGQWDEVARVRLLMRERGVKKEPGCSWVEVENMVHVFLVDDARHPEVQAVYT 690
Query: 599 IID 601
+
Sbjct: 691 YLQ 693
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 122/486 (25%), Positives = 202/486 (41%), Gaps = 86/486 (17%)
Query: 112 LGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYC 171
+ + H +I +GF N F++N L+++Y + ++ A K+F K + V+ T++ Y
Sbjct: 23 IARAVHAHILTSGFKPNTFILNRLINIYCKSSNITYARKLFDKIPKPDIVARTTLLSAYS 82
Query: 172 ENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTS 231
+GNV A++LF+ L + R +S+N+MI+ Y + A ++F + R G P
Sbjct: 83 SSGNVKLAQQLFNATP-LTI-RDTVSYNAMITAYSHGNDGHAALNLFVQ-MKRYGFLPDP 139
Query: 232 FTFGSVLIACADM-NSLRKGKEIHALAIALGLQSDTFVGGALVEMY--CRYQDLV----- 283
FTF SVL A + + + R + +H I LG V AL+ Y C LV
Sbjct: 140 FTFSSVLSALSLIADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYVCCASSPLVKSSQL 199
Query: 284 --AAQMAFDE------------------IENIENLLGKMKEDGFE-PNVYTWNAM----- 317
+A+ FDE + N + + + DG P WNAM
Sbjct: 200 MASARKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGYV 259
Query: 318 ---------QLFSEMLSLDLTPDIYTVGIILSACSS----LATMERGKQVHAYAIRCGYD 364
F M S+ + D YT ++SAC S + G+QVH Y +R +
Sbjct: 260 RRGLYEEAFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYILRTVVE 319
Query: 365 SDVH----IGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAY------------ 408
H + AL+ Y K + AR + ++ D++S NA+L+ Y
Sbjct: 320 PSHHFVLSVNNALITFYTKYDRMIEARRVFDKMPVRDIISWNAVLSGYVNAQRIEEANSI 379
Query: 409 -------------------AMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSI 449
A +G G+EG+ F ++ + G P +F A++AC GS+
Sbjct: 380 FSEMPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGSL 439
Query: 450 KTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
G + + L ++ + SR G + A +P DSV W A++
Sbjct: 440 DNGQQIHSQVIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMPYV-DSVSWNAMIAA 498
Query: 510 CVSHGN 515
HG+
Sbjct: 499 LAQHGH 504
>gi|357167803|ref|XP_003581340.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Brachypodium distachyon]
Length = 940
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 196/597 (32%), Positives = 308/597 (51%), Gaps = 74/597 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG +D A +VF+ + E+D +SWNS+ L C
Sbjct: 309 MYTKCGRVDSALRVFREIDEKDYISWNSM-------------LSC--------------- 340
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+ QNG EAI + M G +P+ + S+ A L L GKE H Y
Sbjct: 341 --------YVQNGLYAEAIEFISEMLRGGFQPDHACIVSLSSAVGHLGWLLNGKEVHAYA 392
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ S+ V N L+D+Y +C + + +F + IK+
Sbjct: 393 IKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFDRMRIKDH-------------------- 432
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
ISW ++I+ Y +S + EA +FR+ ++GI+ GS+L A
Sbjct: 433 ---------------ISWTTIITCYAQSSRHIEALEIFREA-QKEGIKVDPMMIGSILEA 476
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C+ + ++ K++H AI GL D V ++++Y ++ + F+ +E + +
Sbjct: 477 CSGLETILLAKQLHCYAIRNGLL-DLVVKNRIIDIYGECGEVYHSLKMFETVEQKDIVTW 535
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
+ + + A+ LF+EM S D+ PD + IL A L+++ +GK+VH + IR
Sbjct: 536 TSMINCYANSGLLNEALVLFAEMQSTDVQPDSVALVSILGAIGGLSSLAKGKEVHGFLIR 595
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
+ + I ++LVDMY+ CGSL A + + D+V AM+ A MHGHGK+ I
Sbjct: 596 RNFHMEEAIVSSLVDMYSGCGSLSGALKVFNAVKCKDMVLWTAMINATGMHGHGKQAIDL 655
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMVDLLS 479
F+R+L +G PDH+SFL+ L AC H+ + G + D+M + Y ++P +HY C+VDLL
Sbjct: 656 FKRMLQTGVTPDHVSFLALLYACSHSKLVNEGKCYLDMMMSTYRLEPWQEHYACVVDLLG 715
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
R+G+ EAYEFIK +P+ P SV+W +LLG C H N E +AA+RL+ELEP+N GNYV+
Sbjct: 716 RSGQTEEAYEFIKSMPLKPKSVVWCSLLGACRVHKNHELAVVAANRLLELEPDNPGNYVL 775
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEI 596
++N+FA G+W++ R ++ +R + K P CSWIE + +H F D SH +E I
Sbjct: 776 VSNVFAEMGKWNNAKEVRARISERGLRKDPACSWIEIGNNVHTFTTRDNSHRDAERI 832
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 147/565 (26%), Positives = 239/565 (42%), Gaps = 87/565 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKCG + DA+ +F M R SWN
Sbjct: 104 MYGKCGRVADARLLFDGMSSRTVFSWN--------------------------------- 130
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQ---AEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
A+IG + +G EA+G+ M+ A G+ P+ TL+SVL A G E H
Sbjct: 131 ---ALIGAYLSSGSACEALGVYRAMRLSAASGVAPDGCTLASVLKASGVEGDGRCGCEVH 187
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
G ++G + FV N L+ +Y +CG + SA+++F
Sbjct: 188 GLAVKHGLDRSTFVANALIAMYAKCGILDSAMRVF------------------------- 222
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
++ H G R + SWNSMISG + N ++ +A +FR + R + S+T V
Sbjct: 223 -------ELMHDG--RDVASWNSMISGCLQNGMFLQALDLFRGM-QRAVLSMNSYTTVGV 272
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
L C ++ L G+E+HA + G + + LV MY + + +A F EI+ +
Sbjct: 273 LQVCTELAQLNLGRELHAALLKSGSEVNIQCNALLV-MYTKCGRVDSALRVFREIDEKDY 331
Query: 298 LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAY 357
+ + N A++ SEML PD + + SA L + GK+VHAY
Sbjct: 332 ISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQPDHACIVSLSSAVGHLGWLLNGKEVHAY 391
Query: 358 AIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEG 417
AI+ DSD +G L+DMY KC ++++ + R+ D +S ++T YA E
Sbjct: 392 AIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFDRMRIKDHISWTTIITCYAQSSRHIEA 451
Query: 418 IAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDL 477
+ FR G + D + S L AC +I + + Y ++ L +
Sbjct: 452 LEIFREAQKEGIKVDPMMIGSILEACSGLETILLAKQ----LHCYAIRNGLLDLVVKNRI 507
Query: 478 LSRAGELGEAYEFIKKIPMA--PDSVMWGALLGGCVSHGNLEFGQI--AADRLIELEPNN 533
+ GE GE Y +K D V W +++ + G L + A + +++P++
Sbjct: 508 IDIYGECGEVYHSLKMFETVEQKDIVTWTSMINCYANSGLLNEALVLFAEMQSTDVQPDS 567
Query: 534 TGNYVMLANLFAYAGRWSDLARTRQ 558
V L ++ G S LA+ ++
Sbjct: 568 ----VALVSILGAIGGLSSLAKGKE 588
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 87/191 (45%), Gaps = 5/191 (2%)
Query: 329 TPDIYTVGIILSACSSLATMERGKQVHAYAIRCGY--DSDVHIGTALVDMYAKCGSLKHA 386
+P G +L ++ + +G QVHA+A+ G D + T L+ MY KCG + A
Sbjct: 55 SPPQEHYGWVLDLVAAKKAVAQGVQVHAHAVATGSLEGDDGFLATKLLFMYGKCGRVADA 114
Query: 387 RLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRI---LASGFRPDHISFLSALSAC 443
RL + +S+ + S NA++ AY G E + +R + ASG PD + S L A
Sbjct: 115 RLLFDGMSSRTVFSWNALIGAYLSSGSACEALGVYRAMRLSAASGVAPDGCTLASVLKAS 174
Query: 444 VHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMW 503
G + G E L + + S ++ + ++ G L A + + D W
Sbjct: 175 GVEGDGRCGCEVHGLAVKHGLDRSTFVANALIAMYAKCGILDSAMRVFELMHDGRDVASW 234
Query: 504 GALLGGCVSHG 514
+++ GC+ +G
Sbjct: 235 NSMISGCLQNG 245
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 129/298 (43%), Gaps = 14/298 (4%)
Query: 226 GIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALG-LQSDT-FVGGALVEMYCRYQDLV 283
G P +G VL A ++ +G ++HA A+A G L+ D F+ L+ MY + +
Sbjct: 53 GRSPPQEHYGWVLDLVAAKKAVAQGVQVHAHAVATGSLEGDDGFLATKLLFMYGKCGRVA 112
Query: 284 AAQMAFD-----EIENIENLLGKMKEDGFEPNVY-TWNAMQLFSEMLSLDLTPDIYTVGI 337
A++ FD + + L+G G + AM+L + + + PD T+
Sbjct: 113 DARLLFDGMSSRTVFSWNALIGAYLSSGSACEALGVYRAMRLSA---ASGVAPDGCTLAS 169
Query: 338 ILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRI-STP 396
+L A G +VH A++ G D + AL+ MYAKCG L A ++ +
Sbjct: 170 VLKASGVEGDGRCGCEVHGLAVKHGLDRSTFVANALIAMYAKCGILDSAMRVFELMHDGR 229
Query: 397 DLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFF 456
D+ S N+M++ +G + + FR + + + + + L C + G E
Sbjct: 230 DVASWNSMISGCLQNGMFLQALDLFRGMQRAVLSMNSYTTVGVLQVCTELAQLNLGRELH 289
Query: 457 DLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
+ + +++ +V + ++ G + A ++I D + W ++L V +G
Sbjct: 290 AALLKSGSEVNIQCNALLV-MYTKCGRVDSALRVFREID-EKDYISWNSMLSCYVQNG 345
>gi|225469326|ref|XP_002268072.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Vitis vinifera]
Length = 590
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 185/544 (34%), Positives = 292/544 (53%), Gaps = 41/544 (7%)
Query: 60 VSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
+ ++ +I + + + A + R+ G P+ T VL AC + + G++ HG
Sbjct: 71 LPYNTLIAAYASSCTPKAAFLVYGRIVGNGFVPDMYTFPVVLKACTKFLGVQEGEQVHGV 130
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ GF+ + +V N L+ Y CG A
Sbjct: 131 AVKMGFLCDLYVQNSLLHFYSVCGKW-------------------------------GGA 159
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
+FD+M + R ++SW +ISGYV L+DEA ++F ++ + P TF SVL+
Sbjct: 160 GRVFDEM----LVRDVVSWTGLISGYVRTGLFDEAINLF----LKMDVVPNVATFVSVLV 211
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
AC M L GK +H L VG ALV+MY + + L A+ FDE+ + + +
Sbjct: 212 ACGRMGYLSMGKGVHGLVYKRAFGIGLVVGNALVDMYVKCECLCEARKLFDELPDRDIVS 271
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
G ++++LF +M + PD + +LSAC+SL ++ G+ V Y
Sbjct: 272 WTSIISGLVQCKQPKDSLELFYDMQISGVEPDRIILTSVLSACASLGALDYGRWVQEYIE 331
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
R G + D+HIGTALVDMYAKCG ++ A + I ++ + NA+L AMHGHG E +
Sbjct: 332 RQGIEWDIHIGTALVDMYAKCGCIEMALHIFNGIPNRNIFTWNALLGGLAMHGHGHEALK 391
Query: 420 HFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY--YDVKPSLKHYTCMVDL 477
HF ++ +G RP+ ++FL+ L+AC H+G + G +F M ++ P L+HY CM+DL
Sbjct: 392 HFELMIGAGIRPNEVTFLAILTACCHSGLVAEGRSYFYQMISQPFNFSPRLEHYGCMIDL 451
Query: 478 LSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNY 537
L RAG L EAY+FI+ +P+ PD ++WGALL C ++GN+E Q L+EL+ ++G Y
Sbjct: 452 LCRAGLLDEAYKFIRNMPLPPDVLIWGALLSACKANGNVELSQEILSHLLELKSQDSGVY 511
Query: 538 VMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
V+L+N++A RW D+ R R+ MKD+ + K PG S IE E H+F D +H R+E+I+
Sbjct: 512 VLLSNIYATNERWDDVTRVRRLMKDKGIRKFPGSSVIEVDGEAHEFLVGDTNHSRNEDIH 571
Query: 598 TIID 601
+++
Sbjct: 572 ILLN 575
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 107/434 (24%), Positives = 163/434 (37%), Gaps = 114/434 (26%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
Y CG A +VF M RD VSW +++ GL EA+ +M +
Sbjct: 149 FYSVCGKWGGAGRVFDEMLVRDVVSWTGLISGYVRTGLFDEAINLFLKMDVV-------- 200
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
PN T SVL AC R+ LS+GK HG +
Sbjct: 201 -------------------------------PNVATFVSVLVACGRMGYLSMGKGVHGLV 229
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ F V N LVD+Y +C + A K+F + ++ VS +II G + ++
Sbjct: 230 YKRAFGIGLVVGNALVDMYVKCECLCEARKLFDELPDRDIVSWTSIISGLVQCKQPKDSL 289
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
ELF YD S G+EP SVL A
Sbjct: 290 ELF---------------------------YDMQIS---------GVEPDRIILTSVLSA 313
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA + +L G+ + G++ D +G ALV+MY + + A F+ I N
Sbjct: 314 CASLGALDYGRWVQEYIERQGIEWDIHIGTALVDMYAKCGCIEMALHIFNGIPN------ 367
Query: 301 KMKEDGFEPNVYTWN--------------AMQLFSEMLSLDLTPDIYTVGIILSACSSLA 346
N++TWN A++ F M+ + P+ T IL+AC
Sbjct: 368 --------RNIFTWNALLGGLAMHGHGHEALKHFELMIGAGIRPNEVTFLAILTACCHSG 419
Query: 347 TMERGKQVHAYAIRCGYDSDV---HIGTALVDMYAKCGSLKHARLAYKRIST----PDLV 399
+ G+ I ++ H G ++D+ + G L AYK I PD++
Sbjct: 420 LVAEGRSYFYQMISQPFNFSPRLEHYG-CMIDLLCRAGLLDE---AYKFIRNMPLPPDVL 475
Query: 400 SQNAMLTAYAMHGH 413
A+L+A +G+
Sbjct: 476 IWGALLSACKANGN 489
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 122/272 (44%), Gaps = 10/272 (3%)
Query: 245 NSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKE 304
++R K+IHA IA GL D FV + E + ++ V AFD + + +G +
Sbjct: 16 KTIRSLKQIHAHLIASGLLHDEFVLSKVSEFFGKHIGFV--DYAFDFLNQTDLHVGTLPY 73
Query: 305 D----GFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
+ + + A ++ ++ PD+YT ++L AC+ ++ G+QVH A++
Sbjct: 74 NTLIAAYASSCTPKAAFLVYGRIVGNGFVPDMYTFPVVLKACTKFLGVQEGEQVHGVAVK 133
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
G+ D+++ +L+ Y+ CG A + + D+VS +++ Y G E I
Sbjct: 134 MGFLCDLYVQNSLLHFYSVCGKWGGAGRVFDEMLVRDVVSWTGLISGYVRTGLFDEAINL 193
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSR 480
F L P+ +F+S L AC G + G L+ L +VD+ +
Sbjct: 194 F---LKMDVVPNVATFVSVLVACGRMGYLSMGKGVHGLVYKRAFGIGLVVGNALVDMYVK 250
Query: 481 AGELGEAYEFIKKIPMAPDSVMWGALLGGCVS 512
L EA + ++P D V W +++ G V
Sbjct: 251 CECLCEARKLFDELP-DRDIVSWTSIISGLVQ 281
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 139/339 (41%), Gaps = 80/339 (23%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC L +A+K+F +P+RD VSW S+++
Sbjct: 247 MYVKCECLCEARKLFDELPDRDIVSWTSIIS----------------------------- 277
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
G Q ++++ + + MQ G+EP+ L+SVL ACA L L G+ YI
Sbjct: 278 -------GLVQCKQPKDSLELFYDMQISGVEPDRIILTSVLSACASLGALDYGRWVQEYI 330
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R G + + LVD+Y +CG + AL IF+ +N + N ++ G +G+ EA
Sbjct: 331 ERQGIEWDIHIGTALVDMYAKCGCIEMALHIFNGIPNRNIFTWNALLGGLAMHGHGHEAL 390
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFR--------------------D 220
+ F+ M G++ +++ ++++ + L E S F D
Sbjct: 391 KHFELMIGAGIRPNEVTFLAILTACCHSGLVAEGRSYFYQMISQPFNFSPRLEHYGCMID 450
Query: 221 LLMRDG-------------IEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTF 267
LL R G + P +G++L AC ++ +EI + + L Q
Sbjct: 451 LLCRAGLLDEAYKFIRNMPLPPDVLIWGALLSACKANGNVELSQEILSHLLELKSQDSG- 509
Query: 268 VGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDG 306
+Y ++ A +D++ + L MK+ G
Sbjct: 510 -------VYVLLSNIYATNERWDDVTRVRRL---MKDKG 538
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 74/181 (40%), Gaps = 7/181 (3%)
Query: 338 ILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPD 397
+L++ T+ KQ+HA+ I G D + + + + + K + A+ ++ D
Sbjct: 8 LLNSIHRCKTIRSLKQIHAHLIASGLLHDEFVLSKVSEFFGK--HIGFVDYAFDFLNQTD 65
Query: 398 L----VSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGS 453
L + N ++ AYA K + RI+ +GF PD +F L AC ++ G
Sbjct: 66 LHVGTLPYNTLIAAYASSCTPKAAFLVYGRIVGNGFVPDMYTFPVVLKACTKFLGVQEGE 125
Query: 454 EFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSH 513
+ + L ++ S G+ G A ++ + D V W L+ G V
Sbjct: 126 QVHGVAVKMGFLCDLYVQNSLLHFYSVCGKWGGAGRVFDEM-LVRDVVSWTGLISGYVRT 184
Query: 514 G 514
G
Sbjct: 185 G 185
>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
cordifolium]
Length = 679
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 183/550 (33%), Positives = 304/550 (55%), Gaps = 8/550 (1%)
Query: 55 ETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGK 114
+ PN +SW+ +I G + A+ + M + GL PN+ T + +CA+ + GK
Sbjct: 39 QEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKSCAKSKAAQEGK 98
Query: 115 EFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
+ H I + G + V L+ +Y + G + A K+F S ++ VS +I GY G
Sbjct: 99 QIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAMITGYASRG 158
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTF 234
N+ +A+++FD++ + ++SWN+MISGY + Y EA +F +++ D ++P T
Sbjct: 159 NMDKAQKMFDEIP----IKDVVSWNAMISGYAEIGRYKEALELFNEMMKMD-VKPDESTM 213
Query: 235 GSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIEN 294
+VL C ++ G++IH+ G S+ + AL+++Y + ++ A F+ ++
Sbjct: 214 ATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEGLQY 273
Query: 295 IENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV 354
+ + G+ + A+ +F EML L TP+ T+ IL AC+ L ++ G+ +
Sbjct: 274 KDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDIGRWI 333
Query: 355 HAYAIRC--GYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHG 412
H Y + G ++ + T+L+DMYAKCG+++ A + I L S NAM+ +AMHG
Sbjct: 334 HVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGFAMHG 393
Query: 413 HGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHY 471
R+ G PD I+F+ LSAC HAG G + F M Y ++P L+HY
Sbjct: 394 RADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYRIEPKLEHY 453
Query: 472 TCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEP 531
CM+DLL R+G EA E I + M PD V+WG+LL C H NLE G++ A +L+++EP
Sbjct: 454 GCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLLKACKIHKNLELGELIAQKLMKIEP 513
Query: 532 NNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHD 591
N G+YV+L+N++A + RW D+AR R + D+ + K PGCS IE +H+F D+ H
Sbjct: 514 KNPGSYVLLSNIYATSARWDDVARVRTLLNDKGLKKVPGCSSIEIDSMVHEFLIGDKFHP 573
Query: 592 RSEEIYTIID 601
+++EIY +++
Sbjct: 574 QNKEIYKMLE 583
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 195/421 (46%), Gaps = 57/421 (13%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETP--N 58
MY + G ++DA KVF RD VS+ +++T A+ G +++ + +E P +
Sbjct: 122 MYAQNGIVEDAHKVFDTSSHRDVVSYTAMITGYASRG-------NMDKAQKMFDEIPIKD 174
Query: 59 LVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHG 118
+VSW+A+I G+ + G +EA+ + M ++P+ T+++VL C + LG++ H
Sbjct: 175 VVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDESTMATVLSTCTHSGNVELGRQIHS 234
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
+I +GF SN +VN L+D+Y +CG+M A +F K+ +S NT+I GY
Sbjct: 235 WIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEGLQYKDVISWNTLIGGY-------- 286
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
Y+++ + EA +F+++L + G P T S+L
Sbjct: 287 -------------------------AYINH--HKEALLVFQEML-KLGETPNDVTMLSIL 318
Query: 239 IACADMNSLRKGKEIHAL--AIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
ACA + ++ G+ IH G+ ++T + +L++MY + ++ AA FD I N
Sbjct: 319 PACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKS 378
Query: 297 NLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHA 356
GF + A L S M + PD T +LSACS + G+++
Sbjct: 379 LSSCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFK 438
Query: 357 -----YAIRCGYDSDVHIGTALVDMYAKCGSLKHA-RLAYKRISTPDLVSQNAMLTAYAM 410
Y I + H G ++D+ + G K A L PD V ++L A +
Sbjct: 439 SMTLDYRIEPKLE---HYG-CMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLLKACKI 494
Query: 411 H 411
H
Sbjct: 495 H 495
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 113/448 (25%), Positives = 200/448 (44%), Gaps = 84/448 (18%)
Query: 148 ALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVD 207
A+ +F N++S NT+I G+ + + A L+ M L
Sbjct: 31 AISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISL------------------ 72
Query: 208 NSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTF 267
G+ P S+TF + +CA + ++GK+IHA + GL D
Sbjct: 73 ------------------GLSPNSYTFPFLFKSCAKSKAAQEGKQIHAQILKYGLTVDLH 114
Query: 268 VGGALVEMYCRYQDLVAAQMAFDE------IENIENLLG-----------KMKEDGFEPN 310
V +L+ MY + + A FD + + G KM ++ +
Sbjct: 115 VHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAMITGYASRGNMDKAQKMFDEIPIKD 174
Query: 311 VYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHA 356
V +WNAM +LF+EM+ +D+ PD T+ +LS C+ +E G+Q+H+
Sbjct: 175 VVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDESTMATVLSTCTHSGNVELGRQIHS 234
Query: 357 YAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKE 416
+ G+ S++ + AL+D+Y+KCG ++ A ++ + D++S N ++ YA H KE
Sbjct: 235 WIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEGLQYKDVISWNTLIGGYAYINHHKE 294
Query: 417 GIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVK-------PSLK 469
+ F+ +L G P+ ++ LS L AC H G+I G + Y D K SL+
Sbjct: 295 ALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDIGRW---IHVYIDKKLKGIITNTSLQ 351
Query: 470 HYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE--FGQIAADRLI 527
T ++D+ ++ G + A + I + A++ G HG + F ++ +
Sbjct: 352 --TSLIDMYAKCGNIEAANQVFDTI-LNKSLSSCNAMIFGFAMHGRADAAFDLLSRMKKD 408
Query: 528 ELEPNNTGNYVMLANLFAYAGRWSDLAR 555
+EP++ +V L + ++AG SDL R
Sbjct: 409 GIEPDDI-TFVGLLSACSHAG-LSDLGR 434
>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 809
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 191/598 (31%), Positives = 313/598 (52%), Gaps = 71/598 (11%)
Query: 6 GSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAV 65
G L A KVF MPER NLV+W+ +
Sbjct: 179 GDLGSAYKVFDKMPER------------------------------------NLVTWTLM 202
Query: 66 IGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGF 125
I F Q G +AI + M+ G P+ T SSVL AC L L+LGK+ H + R G
Sbjct: 203 ITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGL 262
Query: 126 MSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQ 185
+ V LVD+Y +C +G+V ++R++F+Q
Sbjct: 263 ALDVCVGCSLVDMYAKCA----------------------------ADGSVDDSRKVFEQ 294
Query: 186 MEHLGVQRGIISWNSMISGYVDNSLYD-EAFSMFRDLLMRDGIEPTSFTFGSVLIACADM 244
M + ++SW ++I+ YV + D EA +F ++ I P F+F SVL AC ++
Sbjct: 295 MP----EHNVMSWTAIITAYVQSGECDKEAIELFCKMI-SGHIRPNHFSFSSVLKACGNL 349
Query: 245 NSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKE 304
+ G+++++ A+ LG+ S VG +L+ MY R + A+ AFD + +
Sbjct: 350 SDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIV 409
Query: 305 DGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYD 364
DG+ N+ + A LF+E+ + +T +LS +S+ M +G+Q+H ++ GY
Sbjct: 410 DGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYK 469
Query: 365 SDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRI 424
S+ I AL+ MY++CG+++ A + + +++S +M+T +A HG + F ++
Sbjct: 470 SNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKM 529
Query: 425 LASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMVDLLSRAGE 483
L +G +P+ I++++ LSAC H G I G + F+ M + + P ++HY CMVDLL R+G
Sbjct: 530 LETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGL 589
Query: 484 LGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANL 543
L EA EFI +P+ D+++W LLG C HGN E G+ AA+ ++E EP++ Y++L+NL
Sbjct: 590 LVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNL 649
Query: 544 FAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
A AG+W D+ + R+ MK+R + K GCSWIE + +H+F + SH ++ +IY +D
Sbjct: 650 HASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELD 707
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 121/425 (28%), Positives = 204/425 (48%), Gaps = 49/425 (11%)
Query: 73 GYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVV 132
G A L M + P+ T S +L +C R + LGK H + ++G + V+
Sbjct: 5 GRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVL 64
Query: 133 NGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQ 192
N L+ +Y +CGD +A IF E +G +
Sbjct: 65 NTLISLYSKCGDTETARLIF----------------------------------EGMGNK 90
Query: 193 RGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKE 252
R ++SW++M+S + +NS+ +A F D+L G P + F +V+ AC++ N G+
Sbjct: 91 RDLVSWSAMVSCFANNSMEWQAIWTFLDML-ELGFYPNEYCFAAVIRACSNANYAWVGEI 149
Query: 253 IHALAIALG-LQSDTFVGGALVEMYCRYQ-DLVAAQMAFDEIENIENLLGKMKEDGFEPN 310
I+ + G L++D VG L++M+ + DL +A FD++ + + F
Sbjct: 150 IYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQL 209
Query: 311 VYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIG 370
+A+ LF +M PD +T +LSAC+ L + GKQ+H+ IR G DV +G
Sbjct: 210 GCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVG 269
Query: 371 TALVDMYAKC---GSLKHARLAYKRISTPDLVSQNAMLTAYAMHGH-GKEGIAHFRRILA 426
+LVDMYAKC GS+ +R ++++ +++S A++TAY G KE I F ++++
Sbjct: 270 CSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMIS 329
Query: 427 SGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTC----MVDLLSRAG 482
RP+H SF S L AC + TG + + Y VK + C ++ + +R+G
Sbjct: 330 GHIRPNHFSFSSVLKACGNLSDPYTGEQVYS----YAVKLGIASVNCVGNSLISMYARSG 385
Query: 483 ELGEA 487
+ +A
Sbjct: 386 RMEDA 390
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 136/520 (26%), Positives = 238/520 (45%), Gaps = 69/520 (13%)
Query: 12 KKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQ 71
+K+ + E D V N++++ + G A E M + +LVSWSA++ F
Sbjct: 50 RKLMQSGLELDSVVLNTLISLYSKCGDTETARLIFEGMGN----KRDLVSWSAMVSCFAN 105
Query: 72 NGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFV 131
N + +AI M G PN ++V+ AC+ +G+ +G++ + G++
Sbjct: 106 NSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVC 165
Query: 132 VN-GLVDVYRR-CGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHL 189
V L+D++ + GD+ SA K+F K +N V+ +I + + G +A +LF ME
Sbjct: 166 VGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDME-- 223
Query: 190 GVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRK 249
+SGYV P FT+ SVL AC ++ L
Sbjct: 224 ------------LSGYV----------------------PDRFTYSSVLSACTELGLLAL 249
Query: 250 GKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEP 309
GK++H+ I LGL D VG +LV+MY + AA + D+ K+ E E
Sbjct: 250 GKQLHSRVIRLGLALDVCVGCSLVDMYAK----CAADGSVDDSR-------KVFEQMPEH 298
Query: 310 NVYTWN---------------AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV 354
NV +W A++LF +M+S + P+ ++ +L AC +L+ G+QV
Sbjct: 299 NVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQV 358
Query: 355 HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHG 414
++YA++ G S +G +L+ MYA+ G ++ AR A+ + +LVS NA++ YA +
Sbjct: 359 YSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKS 418
Query: 415 KEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCM 474
+E F I +G +F S LS G++ G + + K + +
Sbjct: 419 EEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNAL 478
Query: 475 VDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
+ + SR G + A++ ++ + + W +++ G HG
Sbjct: 479 ISMYSRCGNIEAAFQVFNEME-DRNVISWTSMITGFAKHG 517
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 160/356 (44%), Gaps = 74/356 (20%)
Query: 1 MYGKC---GSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETP 57
MY KC GS+DD++KVF+ MPE + +SW +++TA +G EC
Sbjct: 275 MYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSG------EC------------ 316
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
D+EAI + +M + + PN + SSVL AC L G++ +
Sbjct: 317 -----------------DKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVY 359
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
Y + G S V N L+ +Y R G M A K F KN VS N I+ GY +N
Sbjct: 360 SYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSE 419
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
EA LF+++ G+ GI ++FTF S+
Sbjct: 420 EAFLLFNEIADTGI--GI----------------------------------SAFTFASL 443
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
L A + ++ KG++IH + G +S+ + AL+ MY R ++ AA F+E+E+
Sbjct: 444 LSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNV 503
Query: 298 LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ 353
+ GF + + A+++F +ML P+ T +LSACS + + G++
Sbjct: 504 ISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQK 559
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 103/252 (40%), Gaps = 37/252 (14%)
Query: 315 NAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALV 374
+A M + PD+ T I+L +C + GK VH ++ G + D + L+
Sbjct: 9 HAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLI 68
Query: 375 DMYAKCGSLKHARLAYKRISTP-DLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDH 433
+Y+KCG + ARL ++ + DLVS +AM++ +A + + I F +L GF P+
Sbjct: 69 SLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNE 128
Query: 434 ISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTC-MVDLLSR-AGELGEAYEFI 491
F + + AC +A G + + + C ++D+ + +G+LG AY+
Sbjct: 129 YCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVF 188
Query: 492 KKIP----------------------------------MAPDSVMWGALLGGCVSHGNLE 517
K+P PD + ++L C G L
Sbjct: 189 DKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLA 248
Query: 518 FGQIAADRLIEL 529
G+ R+I L
Sbjct: 249 LGKQLHSRVIRL 260
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 76/182 (41%), Gaps = 38/182 (20%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +CG+++ A +VF M +R+ +SW S++T A +G ALE +M ET
Sbjct: 481 MYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKML----ET---- 532
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLG-KEFHGY 119
G +PN T +VL AC+ + +S G K F+
Sbjct: 533 ----------------------------GTKPNEITYVAVLSACSHVGMISEGQKHFNSM 564
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCE-NGNVAE 178
+G + +VD+ R G ++ A++ + + + ++G C +GN
Sbjct: 565 YKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTEL 624
Query: 179 AR 180
R
Sbjct: 625 GR 626
>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
Length = 783
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 185/542 (34%), Positives = 300/542 (55%), Gaps = 39/542 (7%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRM-QAEGLEPNARTLSSVLPACARLQKLSLGKEF 116
NL W+A++ +T+N E+A+ + + +P+ TL V+ ACA L L LG+
Sbjct: 171 NLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQII 230
Query: 117 HGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNV 176
HG T+ +S+ FV N L+ +Y +CG + A+K
Sbjct: 231 HGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVK-------------------------- 264
Query: 177 AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRD-GIEPTSFTFG 235
+FD M+ + + SWN+++ GY NS +A ++ L M D G++P FT G
Sbjct: 265 ----RVFDLMD----TKTVSSWNALLCGYAQNSDPRKALDLY--LQMTDSGLDPDWFTIG 314
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
S+L+AC+ M SL G+EIH A+ GL D F+G +L+ +Y AAQ+ FD +E+
Sbjct: 315 SLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHR 374
Query: 296 ENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVH 355
+ + G+ N A+ LF +MLS + P + + ACS L+ + GK++H
Sbjct: 375 SLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELH 434
Query: 356 AYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGK 415
+A++ D+ + ++++DMYAK G + ++ + R+ D+ S N ++ Y +HG GK
Sbjct: 435 CFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGK 494
Query: 416 EGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFD-LMAYYDVKPSLKHYTCM 474
E + F ++L G +PD +F L AC HAG ++ G E+F+ ++ ++++P L+HYTC+
Sbjct: 495 EALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCV 554
Query: 475 VDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNT 534
VD+L RAG + +A I+++P PDS +W +LL C HGNL G+ A++L+ELEP
Sbjct: 555 VDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKP 614
Query: 535 GNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSE 594
NYV+++NLFA +G+W D+ R R +MKD + K GCSWIE ++H F D E
Sbjct: 615 ENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQKDAGCSWIEVGGKVHNFLIGDEMLPELE 674
Query: 595 EI 596
E+
Sbjct: 675 EV 676
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 122/465 (26%), Positives = 219/465 (47%), Gaps = 51/465 (10%)
Query: 136 VDVYRRCGDMLSALKIFSKFSIKNEVSCNT-IIVGYCENGNVAEARELFDQMEHLGVQRG 194
++V RR +M+SA F N+ NT II Y G+ +++R +FD++ ++
Sbjct: 121 IEVGRRLHEMVSASTQFC-----NDFVLNTRIITMYSMCGSPSDSRMVFDKLR----RKN 171
Query: 195 IISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIH 254
+ WN+++S Y N L+++A S+F +L+ +P +FT V+ ACA + L G+ IH
Sbjct: 172 LFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIH 231
Query: 255 ALAIALGLQSDTFVGGALVEMYCRYQDLV--AAQMAFDEIENIENLLGKMKEDGFEPNVY 312
+A + L SD FVG AL+ MY + LV A + FD ++ G+ N
Sbjct: 232 GMATKMDLVSDVFVGNALIAMYGKC-GLVEEAVKRVFDLMDTKTVSSWNALLCGYAQNSD 290
Query: 313 TWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTA 372
A+ L+ +M L PD +T+G +L ACS + ++ G+++H +A+R G D IG +
Sbjct: 291 PRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGIS 350
Query: 373 LVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPD 432
L+ +Y CG A++ + + LVS N M+ Y+ +G E I FR++L+ G +P
Sbjct: 351 LLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPY 410
Query: 433 HISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELG------- 485
I+ + AC +++ G E + + + ++D+ ++ G +G
Sbjct: 411 EIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFD 470
Query: 486 ---------------------------EAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEF 518
E +E + ++ + PD + +L C G +E
Sbjct: 471 RLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVED 530
Query: 519 GQIAADRLIEL---EPNNTGNYVMLANLFAYAGRWSDLARTRQKM 560
G ++++ L EP +Y + ++ AGR D R ++M
Sbjct: 531 GLEYFNQMLNLHNIEP-KLEHYTCVVDMLGRAGRIDDALRLIEEM 574
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 116/430 (26%), Positives = 188/430 (43%), Gaps = 103/430 (23%)
Query: 1 MYGKCGSLDDA-KKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNL 59
MYGKCG +++A K+VF +M +T +
Sbjct: 252 MYGKCGLVEEAVKRVFDLM------------------------------------DTKTV 275
Query: 60 VSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
SW+A++ G+ QN +A+ + +M GL+P+ T+ S+L AC+R++ L G+E HG+
Sbjct: 276 SSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGF 335
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
RNG +PF+ L+ +Y CG +A +F ++ VS N +I GY +NG EA
Sbjct: 336 ALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEA 395
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
LF QM + DGI+P V
Sbjct: 396 INLFRQM------------------------------------LSDGIQPYEIAIMCVCG 419
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
AC+ +++LR GKE+H A+ L D FV ++++MY + + +Q FD +
Sbjct: 420 ACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLR------ 473
Query: 300 GKMKEDGFEPNVYTWN--------------AMQLFSEMLSLDLTPDIYTVGIILSACSSL 345
E +V +WN A++LF +ML L L PD +T IL ACS
Sbjct: 474 --------EKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHA 525
Query: 346 ATMERGKQVHAYAIRC-GYDSDVHIGTALVDMYAKCGSLKHA-RLAYKRISTPDLVSQNA 403
+E G + + + + T +VDM + G + A RL + PD ++
Sbjct: 526 GLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSS 585
Query: 404 MLTAYAMHGH 413
+L++ +HG+
Sbjct: 586 LLSSCRIHGN 595
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/195 (20%), Positives = 90/195 (46%), Gaps = 2/195 (1%)
Query: 317 MQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHA-YAIRCGYDSDVHIGTALVD 375
+Q S+ + LD +G++L AC +E G+++H + + +D + T ++
Sbjct: 90 LQRESDDVVLDSAQRSEAMGVLLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIIT 149
Query: 376 MYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILA-SGFRPDHI 434
MY+ CGS +R+ + ++ +L NA+++AY + ++ ++ F +++ + +PD+
Sbjct: 150 MYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNF 209
Query: 435 SFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKI 494
+ + AC + G + D+ + ++ + + G + EA + + +
Sbjct: 210 TLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDL 269
Query: 495 PMAPDSVMWGALLGG 509
W ALL G
Sbjct: 270 MDTKTVSSWNALLCG 284
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 64/150 (42%), Gaps = 38/150 (25%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVT----------------------------- 31
MY K G + ++++F + E+D SWN ++
Sbjct: 455 MYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFT 514
Query: 32 ------ACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRM 85
AC+ GLV + LE +M +L N P L ++ V+ + G ++A+ ++ M
Sbjct: 515 FTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEM 574
Query: 86 QAEGLEPNARTLSSVLPACARLQKLSLGKE 115
+P++R SS+L +C L LG++
Sbjct: 575 PG---DPDSRIWSSLLSSCRIHGNLGLGEK 601
>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
Length = 1097
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 204/602 (33%), Positives = 301/602 (50%), Gaps = 74/602 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGS+DDA+ VF M +RD ++
Sbjct: 467 MYAKCGSIDDARLVFDGMCDRD------------------------------------VI 490
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A++GG QNG EA + +MQ EGL P++ T S+L L E H +
Sbjct: 491 SWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHA 550
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
G +S+ V + + +Y RCG ++ +AR
Sbjct: 551 VETGLISDFRVGSAFIHMYIRCG-------------------------------SIDDAR 579
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LFD++ R + +WN+MI G EA S+F + R+G P + TF ++L A
Sbjct: 580 LLFDKLS----VRHVTTWNAMIGGAAQQRCGREALSLFLQM-QREGFIPDATTFINILSA 634
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
D +L KE+H+ A GL D VG ALV Y + ++ A+ FD++
Sbjct: 635 NVDEEALEWVKEVHSHATDAGL-VDLRVGNALVHTYSKCGNVKYAKQVFDDMVERNVTTW 693
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
M G + +A F +ML + PD T ILSAC+S +E K+VH +A+
Sbjct: 694 TMMIGGLAQHGCGHDAFSHFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHNHAVS 753
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
G SD+ +G ALV MYAKCGS+ AR + + D+ S M+ A HG G E +
Sbjct: 754 AGLVSDLRVGNALVHMYAKCGSIDDARSVFDDMVERDVFSWTVMIGGLAQHGRGLEALDF 813
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGS-EFFDLMAYYDVKPSLKHYTCMVDLLS 479
F ++ + GF+P+ S+++ L+AC HAG + G +F + Y ++P+++HYTCMVDLL
Sbjct: 814 FVKMKSEGFKPNGYSYVAVLTACSHAGLVDEGRRQFLSMTQDYGIEPTMEHYTCMVDLLG 873
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
RAG L EA FI +P+ PD WGALLG CV++GNLE + AA ++L+P + YV+
Sbjct: 874 RAGLLEEAELFILNMPIEPDDAPWGALLGACVTYGNLEMAEFAAKERLKLKPKSASTYVL 933
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTI 599
L+N++A G+W R M+ + + K PG SWIE + IH F D SH S+EIY
Sbjct: 934 LSNIYAATGKWEQKLLVRSMMQRKGIRKEPGRSWIEVDNRIHSFVVGDTSHPESKEIYAQ 993
Query: 600 ID 601
++
Sbjct: 994 LN 995
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 138/465 (29%), Positives = 217/465 (46%), Gaps = 61/465 (13%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
N+ W+ +IGG+ + G+ E+A+ + +M+ E +PN T S+L AC L GK+ H
Sbjct: 183 NIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKACCCPVNLKWGKKIH 242
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
+I ++GF S+ V LV++Y +CG + A IF K +N +S +I G G
Sbjct: 243 AHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGLAHYGRGQ 302
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
EA LF QM+ R+G P S+T+ S+
Sbjct: 303 EAFHLFLQMQ------------------------------------REGFIPNSYTYVSI 326
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
L A A +L KE+H+ A+ GL D VG ALV MY + + A++ FD + +
Sbjct: 327 LNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDI 386
Query: 298 LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIIL--SACSSLATMERGKQVH 355
+ G + A LF +M P++ T IL SA +S + +E K VH
Sbjct: 387 FSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKVVH 446
Query: 356 AYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGK 415
+A G+ SD+ IG AL+ MYAKCGS+ ARL + + D++S NAM+ A +G G
Sbjct: 447 KHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGH 506
Query: 416 EGIAHFRRILASGFRPDHISFLSALSAC-----------VHAGSIKTGSEFFDLMAYYDV 464
E F ++ G PD ++LS L+ VH +++TG L++ + V
Sbjct: 507 EAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETG-----LISDFRV 561
Query: 465 KPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
+ H + R G + +A K+ + + W A++GG
Sbjct: 562 GSAFIH------MYIRCGSIDDARLLFDKLSVRHVTT-WNAMIGG 599
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 150/562 (26%), Positives = 245/562 (43%), Gaps = 125/562 (22%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGS++DA+ +F M ER N++
Sbjct: 263 MYVKCGSIEDAQLIFDKMVER------------------------------------NVI 286
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ +IGG G +EA + +MQ EG PN+ T S+L A A L KE H +
Sbjct: 287 SWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHA 346
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
G + V N LV +Y + +G++ +AR
Sbjct: 347 VNAGLALDLRVGNALVHMYAK-------------------------------SGSIDDAR 375
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL-- 238
+FD M +R I SW MI G + EAFS+F + R+G P T+ S+L
Sbjct: 376 VVFDGM----TERDIFSWTVMIGGLAQHGRGQEAFSLFLQM-QRNGCLPNLTTYLSILNA 430
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFD-----EIE 293
A A ++L K +H A G SD +G AL+ MY + + A++ FD ++
Sbjct: 431 SAIASTSALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVI 490
Query: 294 NIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ 353
+ ++G + ++G +T +F +M L PD T +L+ S +E +
Sbjct: 491 SWNAMMGGLAQNGCGHEAFT-----VFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNE 545
Query: 354 VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGH 413
VH +A+ G SD +G+A + MY +CGS+ ARL + ++S + + NAM+ A
Sbjct: 546 VHKHAVETGLISDFRVGSAFIHMYIRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRC 605
Query: 414 GKEGIAHFRRILASGFRPDHISFLSALSACV-------------HA-------------- 446
G+E ++ F ++ GF PD +F++ LSA V HA
Sbjct: 606 GREALSLFLQMQREGFIPDATTFINILSANVDEEALEWVKEVHSHATDAGLVDLRVGNAL 665
Query: 447 -------GSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAY-EFIKKIP--M 496
G++K + FD M V+ ++ +T M+ L++ G +A+ F++ + +
Sbjct: 666 VHTYSKCGNVKYAKQVFDDM----VERNVTTWTMMIGGLAQHGCGHDAFSHFLQMLREGI 721
Query: 497 APDSVMWGALLGGCVSHGNLEF 518
PD+ + ++L C S G LE+
Sbjct: 722 VPDATTYVSILSACASTGALEW 743
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 124/478 (25%), Positives = 223/478 (46%), Gaps = 75/478 (15%)
Query: 59 LVSWSAVIGGFTQNGYD----EEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGK 114
LV +A + G + ++ ++A+ ML +G+ ++ + ++L C + + + L K
Sbjct: 79 LVCANASVDGAAEQTHNVITAKDAVAMLKIRVQQGIAIDSFSYVNILQRCLKQEDILLAK 138
Query: 115 EFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
+ H I ++G N +V N L+ VY RCG + C
Sbjct: 139 QVHVCIIKSGMEQNLYVANKLLRVYIRCG----------------RLQC----------- 171
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTF 234
AR++FD++ +++ I W +MI GY + ++A ++ D + ++ +P T+
Sbjct: 172 ----ARQVFDKL----LKKNIYIWTTMIGGYAEYGHAEDAMRVY-DKMRQECGQPNEITY 222
Query: 235 GSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIEN 294
S+L AC +L+ GK+IHA I G QSD V ALV MY + + AQ+ FD++
Sbjct: 223 LSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKM-- 280
Query: 295 IENLLGKMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILS 340
E NV +W M LF +M P+ YT IL+
Sbjct: 281 ------------VERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILN 328
Query: 341 ACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVS 400
A +S +E K+VH++A+ G D+ +G ALV MYAK GS+ AR+ + ++ D+ S
Sbjct: 329 ANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFS 388
Query: 401 QNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA 460
M+ A HG G+E + F ++ +G P+ ++LS L+A A + + E+ ++
Sbjct: 389 WTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIAST--SALEWVKVVH 446
Query: 461 YYDVKPS----LKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
+ + L+ ++ + ++ G + +A + D + W A++GG +G
Sbjct: 447 KHAEEAGFISDLRIGNALIHMYAKCGSIDDA-RLVFDGMCDRDVISWNAMMGGLAQNG 503
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 105/444 (23%), Positives = 205/444 (46%), Gaps = 37/444 (8%)
Query: 125 FMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAREL-- 182
+++P V + L+D +CG + I S F + NE I+VG + R++
Sbjct: 7 LLNSPTVSSELID--GQCGRGV----ISSSFRM-NEAQVQRILVG----STLLSGRQMRH 55
Query: 183 -----------FDQMEHLGVQRGIISWNSMISGYVDNS----LYDEAFSMFRDLLMRDGI 227
F +H + ++ N+ + G + + +A +M + + ++ GI
Sbjct: 56 SRLYFLSISGCFKSEKHKYLPSVLVCANASVDGAAEQTHNVITAKDAVAMLK-IRVQQGI 114
Query: 228 EPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQM 287
SF++ ++L C + K++H I G++ + +V L+ +Y R L A+
Sbjct: 115 AIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLLRVYIRCGRLQCARQ 174
Query: 288 AFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLAT 347
FD++ + G+ + +AM+++ +M P+ T IL AC
Sbjct: 175 VFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKACCCPVN 234
Query: 348 MERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTA 407
++ GK++HA+ I+ G+ SDV + TALV+MY KCGS++ A+L + ++ +++S M+
Sbjct: 235 LKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMIGG 294
Query: 408 YAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPS 467
A +G G+E F ++ GF P+ +++S L+A AG+++ E +
Sbjct: 295 LAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALD 354
Query: 468 LKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLI 527
L+ +V + +++G + +A + D W ++GG HG GQ A +
Sbjct: 355 LRVGNALVHMYAKSGSIDDARVVFDGMT-ERDIFSWTVMIGGLAQHGR---GQEAFSLFL 410
Query: 528 ELEPN----NTGNYVMLANLFAYA 547
+++ N N Y+ + N A A
Sbjct: 411 QMQRNGCLPNLTTYLSILNASAIA 434
>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 191/598 (31%), Positives = 313/598 (52%), Gaps = 71/598 (11%)
Query: 6 GSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAV 65
G L A KVF MPER NLV+W+ +
Sbjct: 197 GDLGSAYKVFDKMPER------------------------------------NLVTWTLM 220
Query: 66 IGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGF 125
I F Q G +AI + M+ G P+ T SSVL AC L L+LGK+ H + R G
Sbjct: 221 ITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGL 280
Query: 126 MSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQ 185
+ V LVD+Y +C +G+V ++R++F+Q
Sbjct: 281 ALDVCVGCSLVDMYAKCA----------------------------ADGSVDDSRKVFEQ 312
Query: 186 MEHLGVQRGIISWNSMISGYVDNSLYD-EAFSMFRDLLMRDGIEPTSFTFGSVLIACADM 244
M + ++SW ++I+ YV + D EA +F ++ I P F+F SVL AC ++
Sbjct: 313 MP----EHNVMSWTAIITAYVQSGECDKEAIELFCKMI-SGHIRPNHFSFSSVLKACGNL 367
Query: 245 NSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKE 304
+ G+++++ A+ LG+ S VG +L+ MY R + A+ AFD + +
Sbjct: 368 SDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIV 427
Query: 305 DGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYD 364
DG+ N+ + A LF+E+ + +T +LS +S+ M +G+Q+H ++ GY
Sbjct: 428 DGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYK 487
Query: 365 SDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRI 424
S+ I AL+ MY++CG+++ A + + +++S +M+T +A HG + F ++
Sbjct: 488 SNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKM 547
Query: 425 LASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMVDLLSRAGE 483
L +G +P+ I++++ LSAC H G I G + F+ M + + P ++HY CMVDLL R+G
Sbjct: 548 LETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGL 607
Query: 484 LGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANL 543
L EA EFI +P+ D+++W LLG C HGN E G+ AA+ ++E EP++ Y++L+NL
Sbjct: 608 LVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNL 667
Query: 544 FAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
A AG+W D+ + R+ MK+R + K GCSWIE + +H+F + SH ++ +IY +D
Sbjct: 668 HASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELD 725
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 121/425 (28%), Positives = 204/425 (48%), Gaps = 49/425 (11%)
Query: 73 GYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVV 132
G A L M + P+ T S +L +C R + LGK H + ++G + V+
Sbjct: 23 GRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVL 82
Query: 133 NGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQ 192
N L+ +Y +CGD +A IF E +G +
Sbjct: 83 NTLISLYSKCGDTETARLIF----------------------------------EGMGNK 108
Query: 193 RGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKE 252
R ++SW++M+S + +NS+ +A F D+L G P + F +V+ AC++ N G+
Sbjct: 109 RDLVSWSAMVSCFANNSMEWQAIWTFLDML-ELGFYPNEYCFAAVIRACSNANYAWVGEI 167
Query: 253 IHALAIALG-LQSDTFVGGALVEMYCRYQ-DLVAAQMAFDEIENIENLLGKMKEDGFEPN 310
I+ + G L++D VG L++M+ + DL +A FD++ + + F
Sbjct: 168 IYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQL 227
Query: 311 VYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIG 370
+A+ LF +M PD +T +LSAC+ L + GKQ+H+ IR G DV +G
Sbjct: 228 GCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVG 287
Query: 371 TALVDMYAKC---GSLKHARLAYKRISTPDLVSQNAMLTAYAMHGH-GKEGIAHFRRILA 426
+LVDMYAKC GS+ +R ++++ +++S A++TAY G KE I F ++++
Sbjct: 288 CSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMIS 347
Query: 427 SGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTC----MVDLLSRAG 482
RP+H SF S L AC + TG + + Y VK + C ++ + +R+G
Sbjct: 348 GHIRPNHFSFSSVLKACGNLSDPYTGEQVYS----YAVKLGIASVNCVGNSLISMYARSG 403
Query: 483 ELGEA 487
+ +A
Sbjct: 404 RMEDA 408
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 136/520 (26%), Positives = 238/520 (45%), Gaps = 69/520 (13%)
Query: 12 KKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQ 71
+K+ + E D V N++++ + G A E M + +LVSWSA++ F
Sbjct: 68 RKLMQSGLELDSVVLNTLISLYSKCGDTETARLIFEGMGN----KRDLVSWSAMVSCFAN 123
Query: 72 NGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFV 131
N + +AI M G PN ++V+ AC+ +G+ +G++ + G++
Sbjct: 124 NSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVC 183
Query: 132 VN-GLVDVYRR-CGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHL 189
V L+D++ + GD+ SA K+F K +N V+ +I + + G +A +LF ME
Sbjct: 184 VGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDME-- 241
Query: 190 GVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRK 249
+SGYV P FT+ SVL AC ++ L
Sbjct: 242 ------------LSGYV----------------------PDRFTYSSVLSACTELGLLAL 267
Query: 250 GKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEP 309
GK++H+ I LGL D VG +LV+MY + AA + D+ K+ E E
Sbjct: 268 GKQLHSRVIRLGLALDVCVGCSLVDMYAK----CAADGSVDDSR-------KVFEQMPEH 316
Query: 310 NVYTWN---------------AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV 354
NV +W A++LF +M+S + P+ ++ +L AC +L+ G+QV
Sbjct: 317 NVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQV 376
Query: 355 HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHG 414
++YA++ G S +G +L+ MYA+ G ++ AR A+ + +LVS NA++ YA +
Sbjct: 377 YSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKS 436
Query: 415 KEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCM 474
+E F I +G +F S LS G++ G + + K + +
Sbjct: 437 EEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNAL 496
Query: 475 VDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
+ + SR G + A++ ++ + + W +++ G HG
Sbjct: 497 ISMYSRCGNIEAAFQVFNEME-DRNVISWTSMITGFAKHG 535
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 160/356 (44%), Gaps = 74/356 (20%)
Query: 1 MYGKC---GSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETP 57
MY KC GS+DD++KVF+ MPE + +SW +++TA +G EC
Sbjct: 293 MYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSG------EC------------ 334
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
D+EAI + +M + + PN + SSVL AC L G++ +
Sbjct: 335 -----------------DKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVY 377
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
Y + G S V N L+ +Y R G M A K F KN VS N I+ GY +N
Sbjct: 378 SYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSE 437
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
EA LF+++ G+ GI ++FTF S+
Sbjct: 438 EAFLLFNEIADTGI--GI----------------------------------SAFTFASL 461
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
L A + ++ KG++IH + G +S+ + AL+ MY R ++ AA F+E+E+
Sbjct: 462 LSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNV 521
Query: 298 LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ 353
+ GF + + A+++F +ML P+ T +LSACS + + G++
Sbjct: 522 ISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQK 577
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 103/252 (40%), Gaps = 37/252 (14%)
Query: 315 NAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALV 374
+A M + PD+ T I+L +C + GK VH ++ G + D + L+
Sbjct: 27 HAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLI 86
Query: 375 DMYAKCGSLKHARLAYKRISTP-DLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDH 433
+Y+KCG + ARL ++ + DLVS +AM++ +A + + I F +L GF P+
Sbjct: 87 SLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNE 146
Query: 434 ISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTC-MVDLLSR-AGELGEAYEFI 491
F + + AC +A G + + + C ++D+ + +G+LG AY+
Sbjct: 147 YCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVF 206
Query: 492 KKIP----------------------------------MAPDSVMWGALLGGCVSHGNLE 517
K+P PD + ++L C G L
Sbjct: 207 DKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLA 266
Query: 518 FGQIAADRLIEL 529
G+ R+I L
Sbjct: 267 LGKQLHSRVIRL 278
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 76/182 (41%), Gaps = 38/182 (20%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +CG+++ A +VF M +R+ +SW S++T A +G ALE +M ET
Sbjct: 499 MYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKML----ET---- 550
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLG-KEFHGY 119
G +PN T +VL AC+ + +S G K F+
Sbjct: 551 ----------------------------GTKPNEITYVAVLSACSHVGMISEGQKHFNSM 582
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCE-NGNVAE 178
+G + +VD+ R G ++ A++ + + + ++G C +GN
Sbjct: 583 YKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTEL 642
Query: 179 AR 180
R
Sbjct: 643 GR 644
>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 804
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 202/607 (33%), Positives = 311/607 (51%), Gaps = 83/607 (13%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGS+ DA++VF M RD V
Sbjct: 173 MYAKCGSVRDARRVFDAMASRD------------------------------------EV 196
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ + G + ++GY EE++ M E + P+ T +VL AC L L GK+ H +I
Sbjct: 197 SWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHI 256
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ + S+ V L +Y +CG A K +AR
Sbjct: 257 VESEYHSDVRVSTALTKMYMKCG----AFK---------------------------DAR 285
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
E+F+ + + R +I+WN+MI G+VD+ +EA F +L +G+ P T+ +VL A
Sbjct: 286 EVFECLSY----RDVIAWNTMIRGFVDSGQLEEAHGTFHRML-EEGVAPDRATYTTVLSA 340
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFD-----EIENI 295
CA L +GKEIHA A GL SD G AL+ MY + + A+ FD ++ +
Sbjct: 341 CARPGGLARGKEIHARAAKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSW 400
Query: 296 ENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVH 355
LLG+ + +T F +ML + + T +L ACS+ ++ GK++H
Sbjct: 401 TTLLGRYADCDQVVESFT-----TFKQMLQQGVKANKITYMCVLKACSNPVALKWGKEIH 455
Query: 356 AYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGK 415
A ++ G +D+ + AL+ MY KCGS++ A ++ +S D+V+ N ++ +G G
Sbjct: 456 AEVVKAGLLADLAVTNALMSMYFKCGSVEDAIRVFEGMSMRDVVTWNTLIGGLGQNGRGL 515
Query: 416 EGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCM 474
E + + + + G RP+ +F++ LSAC ++ G F M+ Y + P+ KHY CM
Sbjct: 516 EALQRYEVMKSEGMRPNAATFVNVLSACRVCNLVEEGRRQFAFMSKDYGIVPTEKHYACM 575
Query: 475 VDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNT 534
VD+L+RAG L EA + I IP+ P + MWGALL C H N+E G+ AA+ ++LEP N
Sbjct: 576 VDILARAGHLREAEDVILTIPLKPSAAMWGALLAACRIHCNVEIGERAAEHCLKLEPQNA 635
Query: 535 GNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSE 594
G YV L+ ++A AG W D+A+ R+ MK+R + K PG SWIE E+H F A D+SH R++
Sbjct: 636 GLYVSLSAIYAAAGMWRDVAKLRKFMKERGVKKEPGRSWIEIAGEVHSFVARDQSHPRTQ 695
Query: 595 EIYTIID 601
EIY ++
Sbjct: 696 EIYAELE 702
Score = 224 bits (571), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 129/428 (30%), Positives = 215/428 (50%), Gaps = 37/428 (8%)
Query: 81 MLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYR 140
+L + +G + ++ +L +C + + L++GK+ H +I R G N ++ N L+ +Y
Sbjct: 15 VLQYLHRKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYA 74
Query: 141 RCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNS 200
CG +V EAR+LFD+ + + ++SWN
Sbjct: 75 HCG-------------------------------SVNEARQLFDKFSN----KSVVSWNV 99
Query: 201 MISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIAL 260
MISGY L EAF++F L+ ++ +EP FTF S+L AC+ L G+EIH +
Sbjct: 100 MISGYAHRGLAQEAFNLF-TLMQQERLEPDKFTFVSILSACSSPAVLNWGREIHVRVMEA 158
Query: 261 GLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLF 320
GL +DT VG AL+ MY + + A+ FD + + + + + + Y +++ +
Sbjct: 159 GLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYGEESLKTY 218
Query: 321 SEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKC 380
ML + P T +LSAC SLA +E+GKQ+HA+ + Y SDV + TAL MY KC
Sbjct: 219 HAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVESEYHSDVRVSTALTKMYMKC 278
Query: 381 GSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSAL 440
G+ K AR ++ +S D+++ N M+ + G +E F R+L G PD ++ + L
Sbjct: 279 GAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVL 338
Query: 441 SACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDS 500
SAC G + G E A + ++ ++++ S+AG + +A + ++P D
Sbjct: 339 SACARPGGLARGKEIHARAAKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMP-KRDV 397
Query: 501 VMWGALLG 508
V W LLG
Sbjct: 398 VSWTTLLG 405
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 148/307 (48%), Gaps = 1/307 (0%)
Query: 222 LMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQD 281
L R G + S+ + +L +C L GK++H + G++ + ++ L+++Y
Sbjct: 19 LHRKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGS 78
Query: 282 LVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSA 341
+ A+ FD+ N + + G+ A LF+ M L PD +T ILSA
Sbjct: 79 VNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSA 138
Query: 342 CSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQ 401
CSS A + G+++H + G +D +G AL+ MYAKCGS++ AR + +++ D VS
Sbjct: 139 CSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVSW 198
Query: 402 NAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY 461
+ AYA G+G+E + + +L RP I++++ LSAC +++ G + +
Sbjct: 199 TTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVE 258
Query: 462 YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQI 521
+ ++ T + + + G +A E + + D + W ++ G V G LE
Sbjct: 259 SEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYR-DVIAWNTMIRGFVDSGQLEEAHG 317
Query: 522 AADRLIE 528
R++E
Sbjct: 318 TFHRMLE 324
>gi|225463844|ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 617
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 201/611 (32%), Positives = 328/611 (53%), Gaps = 58/611 (9%)
Query: 5 CGSLDDAKKV----FKMMPERDC-VSWNSVVTACAANGLVLEALECLERMSSLDNETPNL 59
C S+ K++ K MP D ++ ++ ++A A L ++ L ++ L TPNL
Sbjct: 32 CKSIKGLKQIHASIIKTMPSPDAQLTISTRLSALCAQSLPIDPRYALSLLAQL--RTPNL 89
Query: 60 VSWSAVIGGF-TQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHG 118
++A+I G T N E + + +M ++G+ P+ T+ VL ACA + + G+E HG
Sbjct: 90 PLYNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKACAESRAVREGEEVHG 149
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
+ G S+ +V N L+ +Y C + SA K+F
Sbjct: 150 QAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDT------------------------ 185
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
QR ++SW +MI GYV E +F ++ + ++ T VL
Sbjct: 186 -----------SPQRDLVSWTTMIQGYVKMGFAREGVGLFFEMC-GENLQADGMTLVIVL 233
Query: 239 IACADMNSLRKGKEIHALAIA-LGLQSDTFVGGALVEMYCRYQDLVAAQMAFDE--IENI 295
+CA + LR G+++H I + D FVG ALV+MY + D A+ F E ++N+
Sbjct: 234 SSCARLGDLRLGRKLHRYIIRNSNVNLDVFVGNALVDMYLKCGDANFARKVFQEMPVKNV 293
Query: 296 ---ENLLGKMKEDG-FEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG 351
+++ + + G F+ ++Y +F +M L + PD T+ +L++C++L +E G
Sbjct: 294 VSWNSMISGLAQKGQFKESLY------MFRKMQRLGVKPDDVTLVAVLNSCANLGVLELG 347
Query: 352 KQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMH 411
K VHAY R +D IG ALVDMYAKCGS+ A ++ ++ D+ S AM+ AMH
Sbjct: 348 KWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQACWVFQAMNRKDVYSYTAMIVGLAMH 407
Query: 412 GHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFF-DLMAYYDVKPSLKH 470
G G + + F + G PD ++F+ L+AC H G ++ G ++F D+ Y+++P L+H
Sbjct: 408 GQGGKALDLFSEMPKMGIEPDEVTFVGVLTACSHVGLVEEGRKYFEDMSTIYNLRPQLEH 467
Query: 471 YTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELE 530
Y CMVDLL RAG + EA EFI+ +P+ PD+ + GALLG C HG +E G+ ++ ++E
Sbjct: 468 YGCMVDLLGRAGLINEAEEFIRNMPIEPDAFVLGALLGACKIHGKVELGESVMKKIEKIE 527
Query: 531 PNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSH 590
P G YV+++N+++ A RW D + R+ MK+R + K+PGCS IE IH+F+ D+SH
Sbjct: 528 PRKDGAYVLMSNIYSSANRWRDALKLRKTMKERNLEKTPGCSSIELDGVIHEFQKGDKSH 587
Query: 591 DRSEEIYTIID 601
+ +EIY ++D
Sbjct: 588 PKIKEIYKLLD 598
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 134/296 (45%), Gaps = 39/296 (13%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG + A+KVF+ MP ++ VSWNS+++ A G E+L
Sbjct: 271 MYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLY---------------- 314
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
M +MQ G++P+ TL +VL +CA L L LGK H Y+
Sbjct: 315 --------------------MFRKMQRLGVKPDDVTLVAVLNSCANLGVLELGKWVHAYL 354
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
RN ++ F+ N LVD+Y +CG + A +F + K+ S +IVG +G +A
Sbjct: 355 DRNQIRADGFIGNALVDMYAKCGSIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKAL 414
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+LF +M +G++ +++ +++ L +E F D+ + P +G ++
Sbjct: 415 DLFSEMPKMGIEPDEVTFVGVLTACSHVGLVEEGRKYFEDMSTIYNLRPQLEHYGCMVDL 474
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
+ + +E + ++ D FV GAL+ + + + +IE IE
Sbjct: 475 LGRAGLINEAEE---FIRNMPIEPDAFVLGALLGACKIHGKVELGESVMKKIEKIE 527
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 136/305 (44%), Gaps = 30/305 (9%)
Query: 229 PTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMA 288
P +F S L C + L K+IHA I D A + + R L A +
Sbjct: 20 PHKLSFLSTLQTCKSIKGL---KQIHASIIKTMPSPD-----AQLTISTRLSALCAQSLP 71
Query: 289 FDEIENIENLLGKMKEDGFEPNVYTWNA---------------MQLFSEMLSLDLTPDIY 333
D + +LL +++ PN+ +NA + ++ +MLS + PD Y
Sbjct: 72 IDPRYAL-SLLAQLRT----PNLPLYNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPDNY 126
Query: 334 TVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRI 393
T+ +L AC+ + G++VH AI+ G SDV++ L+ MYA C ++ AR +
Sbjct: 127 TIPFVLKACAESRAVREGEEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTS 186
Query: 394 STPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGS 453
DLVS M+ Y G +EG+ F + + D ++ + LS+C G ++ G
Sbjct: 187 PQRDLVSWTTMIQGYVKMGFAREGVGLFFEMCGENLQADGMTLVIVLSSCARLGDLRLGR 246
Query: 454 EFFD-LMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVS 512
+ ++ +V + +VD+ + G+ A + +++P+ + V W +++ G
Sbjct: 247 KLHRYIIRNSNVNLDVFVGNALVDMYLKCGDANFARKVFQEMPVK-NVVSWNSMISGLAQ 305
Query: 513 HGNLE 517
G +
Sbjct: 306 KGQFK 310
>gi|357167109|ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 921
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 218/726 (30%), Positives = 348/726 (47%), Gaps = 136/726 (18%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLD-------- 53
Y + G + DA++VF MPER+ V+WN++V+ NG + A + M S D
Sbjct: 105 YARLGRVLDARRVFDGMPERNTVAWNAMVSCYVQNGDITMARRLFDAMPSRDVTSWNSMV 164
Query: 54 ----------------NETP--NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNAR 95
+ P NLV+W+ +I G+ + + + M EG P+
Sbjct: 165 TGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWDIFRMMHHEGASPDQS 224
Query: 96 TLSSVLPACARLQKLSL-------------------------------------GKEFHG 118
+SVL A LQ L + K F G
Sbjct: 225 NFASVLSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDASALDIAIKFFDG 284
Query: 119 YITRNGFMSNPFV--------VNGLVDVY------------------RRCGDMLSALKIF 152
+ RN + + + ++ + VY RCG + A +F
Sbjct: 285 MVERNEYTWSTMIAALSHGGRIDAAIAVYGRDPVKSIPSQTALLTGLARCGRITEARILF 344
Query: 153 SKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYD 212
+ VS N +I GY +NG V EA+ELFD+M R ISW MI+GY N +
Sbjct: 345 EQIPDPIVVSWNAMITGYMQNGMVDEAKELFDRMPF----RNTISWAGMIAGYAQNGRSE 400
Query: 213 EAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGAL 272
EA + + L R+G+ P+ + S +AC+ + +L G+++H+LA+ G Q +++V AL
Sbjct: 401 EALDLLQ-ALHRNGMLPSLSSLTSSFLACSHIGALETGRQVHSLAVKAGCQFNSYVCNAL 459
Query: 273 VEMY--CR-------------------YQDLVAAQMAFDEIENIENLLGKMKEDGFEPNV 311
+ MY CR + +AA + + +E+ ++ M +V
Sbjct: 460 ISMYGKCRNMEYVRQVFNRMRVKDTVSWNSFIAALVQNNMLEDARHIFDNM----LSRDV 515
Query: 312 YTWN--------------AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAY 357
+W A++ F ML P+ + I+LS C L + + G+Q+H
Sbjct: 516 VSWTTIISAYAQAERGDEAVEFFKTMLHEHEKPNSPILTILLSVCGGLGSAKLGQQIHTV 575
Query: 358 AIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEG 417
AI+ G DS++ + AL+ MY KCG ++ + + D+ + N +T A HG G+E
Sbjct: 576 AIKHGMDSELIVANALMSMYFKCGCADSHKV-FDSMEERDIFTWNTFITGCAQHGLGREA 634
Query: 418 IAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVD 476
I + + + G P+ ++F+ L+AC HAG + G +FF M+ Y + P L+HY CMVD
Sbjct: 635 IKMYEHMESVGVLPNEVTFVGLLNACSHAGLVDEGWQFFKSMSRDYGLTPLLEHYACMVD 694
Query: 477 LLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGN 536
LL R G++ A +FI +P+ PD+V+W ALLG C H N E G+ AA++L EP+N GN
Sbjct: 695 LLGRTGDVQGAEKFIYDMPIEPDTVIWSALLGACKIHKNAEIGRRAAEKLFTTEPSNAGN 754
Query: 537 YVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEI 596
YVML+N+++ G W ++A R+ MK R + K PGCSW++ R+++H F D+ H++ EEI
Sbjct: 755 YVMLSNIYSSLGMWVEVAELRKIMKQRGVSKEPGCSWMQIRNKVHSFVTGDKQHEKIEEI 814
Query: 597 -YTIID 601
YT+ D
Sbjct: 815 DYTLQD 820
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 132/552 (23%), Positives = 223/552 (40%), Gaps = 131/552 (23%)
Query: 3 GKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSW 62
+ G L +A++VF MP RD ++WNS+++A +G++ +A + +
Sbjct: 44 ARLGRLREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDA----------------RILF 87
Query: 63 SAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQK-LSLGKEFHGYIT 121
A+ GG N RT + +L ARL + L + F G
Sbjct: 88 DAISGG------------------------NVRTATILLSGYARLGRVLDARRVFDGMPE 123
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
R N N +V Y + GD+ A ++F ++ S N+++ GYC + + +A
Sbjct: 124 R-----NTVAWNAMVSCYVQNGDITMARRLFDAMPSRDVTSWNSMVTGYCHSRQMVDAWN 178
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
LF QM QR +++W MISGYV + + + +FR ++ +G P F SVL A
Sbjct: 179 LFKQMP----QRNLVTWTVMISGYVRIEQHGKGWDIFR-MMHHEGASPDQSNFASVLSAV 233
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK 301
+ L + + L + G +SD +G +++ +Y R D A +A K
Sbjct: 234 TGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTR--DASALDIAI-----------K 280
Query: 302 MKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRC 361
+ E N YTW+ M +A + G ++ A
Sbjct: 281 FFDGMVERNEYTWSTM---------------------------IAALSHGGRIDAAIAVY 313
Query: 362 GYD--SDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
G D + TAL+ A+CG + AR+ +++I P +VS NAM+T Y +G E
Sbjct: 314 GRDPVKSIPSQTALLTGLARCGRITEARILFEQIPDPIVVSWNAMITGYMQNGMVDEAKE 373
Query: 420 HFRRI---------------LASGFRPDHISFLSAL----------------SACVHAGS 448
F R+ +G + + L AL AC H G+
Sbjct: 374 LFDRMPFRNTISWAGMIAGYAQNGRSEEALDLLQALHRNGMLPSLSSLTSSFLACSHIGA 433
Query: 449 IKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKI---PMAPDSVMWGA 505
++TG + L + Y C L+S G+ E+++++ D+V W +
Sbjct: 434 LETGRQVHSLAVKAGCQ--FNSYVCNA-LISMYGKC-RNMEYVRQVFNRMRVKDTVSWNS 489
Query: 506 LLGGCVSHGNLE 517
+ V + LE
Sbjct: 490 FIAALVQNNMLE 501
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 115/229 (50%), Gaps = 6/229 (2%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKC +++ ++VF M +D VSWNS + A N ++ +A + M S D +V
Sbjct: 462 MYGKCRNMEYVRQVFNRMRVKDTVSWNSFIAALVQNNMLEDARHIFDNMLSRD-----VV 516
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ +I + Q +EA+ M E +PN+ L+ +L C L LG++ H
Sbjct: 517 SWTTIISAYAQAERGDEAVEFFKTMLHEHEKPNSPILTILLSVCGGLGSAKLGQQIHTVA 576
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
++G S V N L+ +Y +CG + K+F ++ + NT I G ++G EA
Sbjct: 577 IKHGMDSELIVANALMSMYFKCG-CADSHKVFDSMEERDIFTWNTFITGCAQHGLGREAI 635
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEP 229
++++ ME +GV +++ +++ L DE + F+ + G+ P
Sbjct: 636 KMYEHMESVGVLPNEVTFVGLLNACSHAGLVDEGWQFFKSMSRDYGLTP 684
>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
Length = 746
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 180/545 (33%), Positives = 297/545 (54%), Gaps = 36/545 (6%)
Query: 57 PNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEF 116
P++ W+A++ ++++G+ AI M RMQ + P+ + VL AC+ L L +G+
Sbjct: 136 PDVFLWNAIVRCYSRHGFFGHAIEMYARMQVACVSPDGFSFPCVLKACSALPALEMGRRV 195
Query: 117 HGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNV 176
HG I R+GF S+ FV NGLV +Y +CG+++ A +F +
Sbjct: 196 HGQIFRHGFESDVFVQNGLVALYAKCGEIVRANAVFGRL--------------------- 234
Query: 177 AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGS 236
V R I+SW S+ISGY N EA +F ++ + + P S
Sbjct: 235 --------------VDRTIVSWTSIISGYAQNGQPIEALRIFSEM-RKTNVRPDWIALVS 279
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
VL A D+ L GK IH I +GL+ + + +L +Y + ++ A++ F+++EN
Sbjct: 280 VLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLLISLTSLYAKCGHVMVARLFFNQVENPS 339
Query: 297 NLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHA 356
+ G+ N Y A++LF M S ++ PD TV ++AC+ + ++E + +
Sbjct: 340 LIFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQIGSLELARWMDE 399
Query: 357 YAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKE 416
Y + +DV + T+L+D YAKCGS+ AR + RI D+V +AM+ Y +HG G+E
Sbjct: 400 YISMSEFRNDVIVNTSLIDTYAKCGSVDMARFVFDRIPDKDVVVWSAMMVGYGLHGQGRE 459
Query: 417 GIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVD 476
I F + +G P+ ++F+ L+AC ++G ++ G + F M Y ++P +HY C+VD
Sbjct: 460 SIILFHAMRQAGVSPNDVTFVGLLTACKNSGLVEEGWDLFHRMRDYGIEPRHQHYACVVD 519
Query: 477 LLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGN 536
LL RAG L AY F+ +P+ P +WGALL C H ++ G+ AA+RL L+P NTG+
Sbjct: 520 LLGRAGHLDRAYNFVMNMPIEPGVSVWGALLSACKIHRHVTLGEYAAERLFSLDPYNTGH 579
Query: 537 YVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEI 596
YV L+NL+A + W +A+ R M+++ + K G S IE ++ F+A D++H RS+EI
Sbjct: 580 YVQLSNLYASSCLWDCVAKVRVLMREKGLTKHLGYSVIEINGKLQAFQAGDKTHPRSKEI 639
Query: 597 YTIID 601
+ ++
Sbjct: 640 FEEVE 644
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 170/342 (49%), Gaps = 6/342 (1%)
Query: 174 GNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFT 233
G V+ AR+LFD+ + WN+++ Y + + A M+ + + + P F+
Sbjct: 121 GEVSCARKLFDKFP----DPDVFLWNAIVRCYSRHGFFGHAIEMYARMQVA-CVSPDGFS 175
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
F VL AC+ + +L G+ +H G +SD FV LV +Y + ++V A F +
Sbjct: 176 FPCVLKACSALPALEMGRRVHGQIFRHGFESDVFVQNGLVALYAKCGEIVRANAVFGRLV 235
Query: 294 NIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ 353
+ + G+ N A+++FSEM ++ PD + +L A + + +E GK
Sbjct: 236 DRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNVRPDWIALVSVLRAYTDVEDLEHGKS 295
Query: 354 VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGH 413
+H I+ G + + + +L +YAKCG + ARL + ++ P L+ NAM++ Y +G+
Sbjct: 296 IHGCVIKMGLECEFDLLISLTSLYAKCGHVMVARLFFNQVENPSLIFWNAMISGYVKNGY 355
Query: 414 GKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTC 473
+E I FR + + RPD I+ S+++AC GS++ + ++ + + + T
Sbjct: 356 AEEAIELFRLMKSKNIRPDSITVTSSIAACAQIGSLELARWMDEYISMSEFRNDVIVNTS 415
Query: 474 MVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
++D ++ G + A +IP D V+W A++ G HG
Sbjct: 416 LIDTYAKCGSVDMARFVFDRIP-DKDVVVWSAMMVGYGLHGQ 456
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 126/266 (47%), Gaps = 1/266 (0%)
Query: 252 EIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNV 311
+I+A + GLQ F+ LV ++ A+ FD+ + + L + +
Sbjct: 93 QIYAKLLVTGLQYGGFLIAKLVNKASNIGEVSCARKLFDKFPDPDVFLWNAIVRCYSRHG 152
Query: 312 YTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGT 371
+ +A+++++ M ++PD ++ +L ACS+L +E G++VH R G++SDV +
Sbjct: 153 FFGHAIEMYARMQVACVSPDGFSFPCVLKACSALPALEMGRRVHGQIFRHGFESDVFVQN 212
Query: 372 ALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRP 431
LV +YAKCG + A + R+ +VS ++++ YA +G E + F + + RP
Sbjct: 213 GLVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNVRP 272
Query: 432 DHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFI 491
D I+ +S L A ++ G + ++ + L ++ G + A F
Sbjct: 273 DWIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLLISLTSLYAKCGHVMVARLFF 332
Query: 492 KKIPMAPDSVMWGALLGGCVSHGNLE 517
++ P + W A++ G V +G E
Sbjct: 333 NQVE-NPSLIFWNAMISGYVKNGYAE 357
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 104/185 (56%), Gaps = 3/185 (1%)
Query: 55 ETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGK 114
E P+L+ W+A+I G+ +NGY EEAI + M+++ + P++ T++S + ACA++ L L +
Sbjct: 336 ENPSLIFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQIGSLELAR 395
Query: 115 EFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
YI+ + F ++ V L+D Y +CG + A +F + K+ V + ++VGY +G
Sbjct: 396 WMDEYISMSEFRNDVIVNTSLIDTYAKCGSVDMARFVFDRIPDKDVVVWSAMMVGYGLHG 455
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRD-GIEPTSFT 233
E+ LF M GV +++ +++ ++ L +E + +F MRD GIEP
Sbjct: 456 QGRESIILFHAMRQAGVSPNDVTFVGLLTACKNSGLVEEGWDLFHR--MRDYGIEPRHQH 513
Query: 234 FGSVL 238
+ V+
Sbjct: 514 YACVV 518
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 92/402 (22%), Positives = 163/402 (40%), Gaps = 42/402 (10%)
Query: 13 KVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQN 72
++F+ E D N +V A G ++ A R+ +D +VSW+++I G+ QN
Sbjct: 198 QIFRHGFESDVFVQNGLVALYAKCGEIVRANAVFGRL--VDR---TIVSWTSIISGYAQN 252
Query: 73 GYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVV 132
G EA+ + M+ + P+ L SVL A ++ L GK HG + + G ++
Sbjct: 253 GQPIEALRIFSEMRKTNVRPDWIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLL 312
Query: 133 NGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQ 192
L +Y +CG ++ A F++ + + N +I GY +NG EA ELF
Sbjct: 313 ISLTSLYAKCGHVMVARLFFNQVENPSLIFWNAMISGYVKNGYAEEAIELF--------- 363
Query: 193 RGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKE 252
L+ I P S T S + ACA + SL +
Sbjct: 364 ---------------------------RLMKSKNIRPDSITVTSSIAACAQIGSLELARW 396
Query: 253 IHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVY 312
+ ++D V +L++ Y + + A+ FD I + + ++ G+ +
Sbjct: 397 MDEYISMSEFRNDVIVNTSLIDTYAKCGSVDMARFVFDRIPDKDVVVWSAMMVGYGLHGQ 456
Query: 313 TWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTA 372
++ LF M ++P+ T +L+AC + +E G + G +
Sbjct: 457 GRESIILFHAMRQAGVSPNDVTFVGLLTACKNSGLVEEGWDLFHRMRDYGIEPRHQHYAC 516
Query: 373 LVDMYAKCGSLKHA-RLAYKRISTPDLVSQNAMLTAYAMHGH 413
+VD+ + G L A P + A+L+A +H H
Sbjct: 517 VVDLLGRAGHLDRAYNFVMNMPIEPGVSVWGALLSACKIHRH 558
>gi|358347043|ref|XP_003637572.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503507|gb|AES84710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 833
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 205/613 (33%), Positives = 319/613 (52%), Gaps = 64/613 (10%)
Query: 1 MYGKCGSLDDAKKVFKMMPER---DCVSWNSVVTACAANGLVLEALECLERMSSLDNETP 57
MYGKC ++ A+KVF + R D V+WNS+V+ + C P
Sbjct: 170 MYGKCKAVVHARKVFDELCYRGICDSVTWNSIVSVYS---------HCF---------VP 211
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
N+ + + E +G G+ P+ + ++LP C L G++ H
Sbjct: 212 NVAV----------SLFREMTVGY-------GILPDTVGVVNILPVCGYLGLGLCGRQVH 254
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
G+ R+G + + FV N LVD+Y +CG M A K+F + K+ V+ N ++ GY +NG
Sbjct: 255 GFCVRSGLVEDVFVGNALVDMYAKCGKMEDANKVFERMRFKDVVTWNAMVTGYSQNGRFE 314
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
+A LF +M ++ +++W+S+ISGY EA +FR + P T S+
Sbjct: 315 DALSLFGKMREEKIESDVVTWSSVISGYAQRGFGCEAMDVFRQMC-GCRCRPNVVTLMSL 373
Query: 238 LIACADMNSLRKGKEIHALAIALGLQ-------SDTFVGGALVEMYCRYQDLVAAQMAFD 290
L ACA + +L GKE H ++ L+ D V AL++MY + + L A+ FD
Sbjct: 374 LSACASVGALLHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFD 433
Query: 291 EI--ENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLD--LTPDIYTVGIILSACSSLA 346
EI ++ + + + G+ + +A+QLFSEM +D + P+ +T+ +L AC+ LA
Sbjct: 434 EICPKDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPNDFTISCVLMACARLA 493
Query: 347 TMERGKQVHAYAIR-CGYDSDV-HIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAM 404
++ GKQ+HAY +R DSDV + L+DMY+K G + A++ + +S + VS ++
Sbjct: 494 ALKFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAVSWTSL 553
Query: 405 LTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDV 464
LT Y MHG ++ F + D I+FL L AC H+G + V
Sbjct: 554 LTGYGMHGRSEDAFRVFDEMRKEALVLDGITFLVVLYACSHSG------------MDFGV 601
Query: 465 KPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAAD 524
P ++HY CMVDLL RAG LGEA I +P+ P V+W ALL C H N E + AA
Sbjct: 602 DPGVEHYACMVDLLGRAGRLGEAMRLINDMPIEPTPVVWIALLSACRIHSNEELAEFAAK 661
Query: 525 RLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFR 584
+L+EL+ +N G Y +L+N++A A RW D+AR MK + K PG SW++ R + F
Sbjct: 662 KLLELKADNDGTYTLLSNIYANARRWKDVARIGYLMKRTGIKKIPGWSWVKGRKGMETFY 721
Query: 585 ASDRSHDRSEEIY 597
DR+H +S++IY
Sbjct: 722 VGDRTHLQSQKIY 734
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 136/545 (24%), Positives = 234/545 (42%), Gaps = 96/545 (17%)
Query: 27 NSVVTACAANGLVLEALECLERMSSLDNETPNLVS---WSAVIGGFTQNGYDEEAIGMLF 83
N + T ++N + A+ LE+ N TP+ S W+ +I A+ +
Sbjct: 62 NLIYTYISSNSIT-NAILLLEK-----NVTPSHSSVYWWNQLIRHALHFNSPNTALRLFR 115
Query: 84 RMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCG 143
RM+ P+ T V AC + LG HG + R GF SN FV N ++ +Y +C
Sbjct: 116 RMKTLHWTPDHYTFPFVFKACGEISNFELGASIHGCVIRLGFESNVFVCNAVISMYGKCK 175
Query: 144 DMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMIS 203
++ A K+F + + G C++ ++WNS++S
Sbjct: 176 AVVHARKVFDELCYR----------GICDS----------------------VTWNSIVS 203
Query: 204 GYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQ 263
Y + + A S+FR++ + GI P + ++L C + G+++H + GL
Sbjct: 204 VYSHCFVPNVAVSLFREMTVGYGILPDTVGVVNILPVCGYLGLGLCGRQVHGFCVRSGLV 263
Query: 264 SDTFVGGALVEMYCRYQDLVAAQMAFDEI---------------------ENIENLLGKM 302
D FVG ALV+MY + + A F+ + E+ +L GKM
Sbjct: 264 EDVFVGNALVDMYAKCGKMEDANKVFERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKM 323
Query: 303 KEDGFEPNVYTWN--------------AMQLFSEMLSLDLTPDIYTVGIILSACSSLATM 348
+E+ E +V TW+ AM +F +M P++ T+ +LSAC+S+ +
Sbjct: 324 REEKIESDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSACASVGAL 383
Query: 349 ERGKQVHAYAIRCGYD-------SDVHIGTALVDMYAKCGSLKHARLAYKRISTP--DLV 399
GK+ H Y+++ D+ + AL+DMYAKC SL+ AR + I D+V
Sbjct: 384 LHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFDEICPKDRDVV 443
Query: 400 SQNAMLTAYAMHGHGKEGIAHFRRILA--SGFRPDHISFLSALSACVHAGSIKTGSEFFD 457
+ M+ YA HG + F + + P+ + L AC ++K G +
Sbjct: 444 TWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPNDFTISCVLMACARLAALKFGKQ--- 500
Query: 458 LMAYYDVKPSLKH-----YTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVS 512
+ AY + + C++D+ S++G++ A + ++V W +LL G
Sbjct: 501 IHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMS-KRNAVSWTSLLTGYGM 559
Query: 513 HGNLE 517
HG E
Sbjct: 560 HGRSE 564
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 135/301 (44%), Gaps = 29/301 (9%)
Query: 251 KEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPN 310
++ L A L + G L+ Y +L+ ++ + I N LL K +
Sbjct: 32 QQCKTLTQAKLLHQQYIINGHLLNSYTNVTNLIYTYISSNSITNAILLLEKNVTPS-HSS 90
Query: 311 VYTWN--------------AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHA 356
VY WN A++LF M +L TPD YT + AC ++ E G +H
Sbjct: 91 VYWWNQLIRHALHFNSPNTALRLFRRMKTLHWTPDHYTFPFVFKACGEISNFELGASIHG 150
Query: 357 YAIRCGYDSDVHIGTALVDMYAKCGSLKHAR-----LAYKRISTPDLVSQNAMLTAYAMH 411
IR G++S+V + A++ MY KC ++ HAR L Y+ I D V+ N++++ Y+
Sbjct: 151 CVIRLGFESNVFVCNAVISMYGKCKAVVHARKVFDELCYRGIC--DSVTWNSIVSVYSHC 208
Query: 412 GHGKEGIAHFRRI-LASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKH 470
++ FR + + G PD + ++ L C + G G + + +
Sbjct: 209 FVPNVAVSLFREMTVGYGILPDTVGVVNILPVCGYLGLGLCGRQVHGFCVRSGLVEDVFV 268
Query: 471 YTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE-----FGQIAADR 525
+VD+ ++ G++ +A + +++ D V W A++ G +G E FG++ ++
Sbjct: 269 GNALVDMYAKCGKMEDANKVFERMRF-KDVVTWNAMVTGYSQNGRFEDALSLFGKMREEK 327
Query: 526 L 526
+
Sbjct: 328 I 328
>gi|225444744|ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
[Vitis vinifera]
Length = 597
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 197/593 (33%), Positives = 312/593 (52%), Gaps = 49/593 (8%)
Query: 5 CGSLDDAKKVFKMMPERDC-----VSWNSVVTACAANGLVLEALECLERMSSLDNETPNL 59
C SL D ++ ++ C +S ++TAC + A + ++M D +
Sbjct: 39 CSSLPDLSRIHALVVTNGCGQNLLLSTKLIITACCLAPTMDYARKMFDQMPKRD-----V 93
Query: 60 VSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
W+ +I G+ G EEA+ + M GL P+ T V+ +CA L L GKE H
Sbjct: 94 FLWNTLIRGYADAGPCEEALALYSNMHGAGLFPDNYTFPFVVRSCAVLSALREGKEVHCN 153
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
I ++GF S+ FV + LV +Y + G+ L +F + ++N
Sbjct: 154 IVKHGFDSDVFVQSSLVAMYSQSGETLGMELVFGEMVVRN-------------------- 193
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
I+SW ++I+GYV N + E +FR+++ G +P + T SVL
Sbjct: 194 ---------------IVSWTAVIAGYVQNRYFKEGLGVFREMV-GSGTQPNAVTLVSVLP 237
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
ACA + L GK IH I LG+ D + AL+ +Y + ++ A+ FD + ++NL+
Sbjct: 238 ACAGLEFLNLGKLIHGYGIKLGVDPDVSLTNALIALYGKCGNVETARSLFDGMV-VQNLV 296
Query: 300 G-KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYA 358
+E N NA++LF M + + D T+ ++SAC+SL + G+ +H
Sbjct: 297 SWNAMIAAYEQNNAGANAVKLFRRMQAEKVDFDYITMVSVISACASLGALNTGRWMHELV 356
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGI 418
R G + +V I AL+DMYAKCG++ AR ++R+ +VS +M+ A A HGHG++ +
Sbjct: 357 KRKGLEINVSITNALIDMYAKCGNIDLAREVFERLPCRSVVSWTSMIGACASHGHGEDAL 416
Query: 419 AHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFD-LMAYYDVKPSLKHYTCMVDL 477
F R+ G +P+ +F + +AC H+G ++ G + F+ +M Y + P ++H CMVDL
Sbjct: 417 KLFSRMKDEGVKPNSFTFAAVFTACRHSGLVEEGRKHFESMMRDYSIMPGVEHCACMVDL 476
Query: 478 LSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNY 537
L RAG L EAYEFI K+P+ PD +WGALLG C H NLE ++ A++L L+P Y
Sbjct: 477 LGRAGSLMEAYEFIDKMPVEPDVSVWGALLGSCRIHSNLELAELVAEKLFLLDPQTVTFY 536
Query: 538 VMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSH 590
V+++N++A AGRW D AR R+ M++R + K PG S +E H F + RS
Sbjct: 537 VLMSNIYAEAGRWEDAARLRKLMEERELKKIPGHSLVEVNRRFHTFLSGSRSQ 589
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 110/424 (25%), Positives = 181/424 (42%), Gaps = 92/424 (21%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY + G + VF M R+ VSW
Sbjct: 172 MYSQSGETLGMELVFGEMVVRNIVSW---------------------------------- 197
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+AVI G+ QN Y +E +G+ M G +PNA TL SVLPACA L+ L+LGK HGY
Sbjct: 198 --TAVIAGYVQNRYFKEGLGVFREMVGSGTQPNAVTLVSVLPACAGLEFLNLGKLIHGYG 255
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G + + N L+ +Y +CG++ +A +F ++N VS N +I Y +N A A
Sbjct: 256 IKLGVDPDVSLTNALIALYGKCGNVETARSLFDGMVVQNLVSWNAMIAAYEQNNAGANAV 315
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+LF +M+ V I+ S+IS A
Sbjct: 316 KLFRRMQAEKVDFDYITMVSVIS------------------------------------A 339
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE-----NI 295
CA + +L G+ +H L GL+ + + AL++MY + ++ A+ F+ + +
Sbjct: 340 CASLGALNTGRWMHELVKRKGLEINVSITNALIDMYAKCGNIDLAREVFERLPCRSVVSW 399
Query: 296 ENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ-- 353
+++G G + +A++LFS M + P+ +T + +AC +E G++
Sbjct: 400 TSMIGACASHG-----HGEDALKLFSRMKDEGVKPNSFTFAAVFTACRHSGLVEEGRKHF 454
Query: 354 ---VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHA-RLAYKRISTPDLVSQNAMLTAYA 409
+ Y+I G V +VD+ + GSL A K PD+ A+L +
Sbjct: 455 ESMMRDYSIMPG----VEHCACMVDLLGRAGSLMEAYEFIDKMPVEPDVSVWGALLGSCR 510
Query: 410 MHGH 413
+H +
Sbjct: 511 IHSN 514
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 127/280 (45%), Gaps = 5/280 (1%)
Query: 231 SFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALV-EMYCRYQDLVAAQMAF 289
S +F +L C+ + L + IHAL + G + + L+ C + A+ F
Sbjct: 29 SRSFNYLLNCCSSLPDLSR---IHALVVTNGCGQNLLLSTKLIITACCLAPTMDYARKMF 85
Query: 290 DEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATME 349
D++ + L G+ A+ L+S M L PD YT ++ +C+ L+ +
Sbjct: 86 DQMPKRDVFLWNTLIRGYADAGPCEEALALYSNMHGAGLFPDNYTFPFVVRSCAVLSALR 145
Query: 350 RGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYA 409
GK+VH ++ G+DSDV + ++LV MY++ G L + + ++VS A++ Y
Sbjct: 146 EGKEVHCNIVKHGFDSDVFVQSSLVAMYSQSGETLGMELVFGEMVVRNIVSWTAVIAGYV 205
Query: 410 MHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLK 469
+ + KEG+ FR ++ SG +P+ ++ +S L AC + G V P +
Sbjct: 206 QNRYFKEGLGVFREMVGSGTQPNAVTLVSVLPACAGLEFLNLGKLIHGYGIKLGVDPDVS 265
Query: 470 HYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
++ L + G + A + + + V W A++
Sbjct: 266 LTNALIALYGKCGNVETARSLFDGM-VVQNLVSWNAMIAA 304
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 92/215 (42%), Gaps = 37/215 (17%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG++D A++VF+ +P R VSW S++ ACA++G +AL+ RM
Sbjct: 374 MYAKCGNIDLAREVFERLPCRSVVSWTSMIGACASHGHGEDALKLFSRM----------- 422
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLG-KEFHGY 119
+ EG++PN+ T ++V AC + G K F
Sbjct: 423 -------------------------KDEGVKPNSFTFAAVFTACRHSGLVEEGRKHFESM 457
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ M +VD+ R G ++ A + K ++ +VS ++G C + E
Sbjct: 458 MRDYSIMPGVEHCACMVDLLGRAGSLMEAYEFIDKMPVEPDVSVWGALLGSCRIHSNLEL 517
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEA 214
EL + L + + + M + Y + +++A
Sbjct: 518 AELVAEKLFLLDPQTVTFYVLMSNIYAEAGRWEDA 552
>gi|242045096|ref|XP_002460419.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
gi|241923796|gb|EER96940.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
Length = 635
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 181/510 (35%), Positives = 273/510 (53%), Gaps = 36/510 (7%)
Query: 90 LEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSAL 149
L P R S++ ACA+ + L+ + H +++R+ + F++N L+ +Y
Sbjct: 58 LAPTPRVYHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMY---------- 107
Query: 150 KIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNS 209
C+ G V++AR +FD + R ++SW +I+GY N
Sbjct: 108 ---------------------CKCGAVSDARHVFDGIP----TRDVVSWTYLITGYAQND 142
Query: 210 LYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVG 269
+ EA + D+L R P+ FTF S L A G+++HALA+ L D +VG
Sbjct: 143 MPAEALGLLPDML-RARFRPSGFTFTSFLKAAGACGGRGIGEQMHALAVKYNLDEDVYVG 201
Query: 270 GALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLT 329
AL++MY R Q + A FD +++ + GF + F+EM
Sbjct: 202 SALLDMYARCQQMDMAIRVFDWLDSKNEVSWNALIAGFARKGDGETTLMKFAEMQRNGFG 261
Query: 330 PDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLA 389
+T + SA + + +E+G+ VHA+ I+ G + ++ MYAK GS+ AR
Sbjct: 262 ATHFTYSSVFSALARIGALEQGRWVHAHMIKSGQKLTAFVANTILGMYAKSGSMVDARKV 321
Query: 390 YKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSI 449
+ R+ DLV+ N MLTA+A +G GKE +AHF I G + + I+FLS L+AC H G +
Sbjct: 322 FDRVDQRDLVTWNTMLTAFAQYGLGKEAVAHFEEIRKYGIQLNQITFLSVLTACSHGGLV 381
Query: 450 KTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
K G ++FD+M Y+V+P + HY VDLL RAG L EA F+ K+PM P + +WGALLG
Sbjct: 382 KEGKQYFDMMKDYNVEPEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGA 441
Query: 510 CVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSP 569
C H N + GQ AAD + EL+P +TG V+L N++A G+W D AR R+ MK + K P
Sbjct: 442 CRMHKNAKIGQYAADHVFELDPEDTGPPVLLYNIYASTGQWDDAARVRKMMKATGVKKEP 501
Query: 570 GCSWIEDRDEIHKFRASDRSHDRSEEIYTI 599
CSW+E + +H F A D +H +SEEIY +
Sbjct: 502 ACSWVEIENSVHMFVADDSTHPKSEEIYRM 531
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 101/418 (24%), Positives = 165/418 (39%), Gaps = 73/418 (17%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG++ DA+ VF +P RD +V
Sbjct: 106 MYCKCGAVSDARHVFDGIPTRD------------------------------------VV 129
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ +I G+ QN EA+G+L M P+ T +S L A +G++ H
Sbjct: 130 SWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKAAGACGGRGIGEQMHALA 189
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ + +V + L+D+Y RC M A+++F KNEVS N +I G+ G+
Sbjct: 190 VKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDSKNEVSWNALIAGFARKGDGETTL 249
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
F +M+ R+G T FT+ SV A
Sbjct: 250 MKFAEMQ------------------------------------RNGFGATHFTYSSVFSA 273
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
A + +L +G+ +HA I G + FV ++ MY + +V A+ FD ++ + +
Sbjct: 274 LARIGALEQGRWVHAHMIKSGQKLTAFVANTILGMYAKSGSMVDARKVFDRVDQRDLVTW 333
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
F A+ F E+ + + T +L+ACS ++ GKQ
Sbjct: 334 NTMLTAFAQYGLGKEAVAHFEEIRKYGIQLNQITFLSVLTACSHGGLVKEGKQYFDMMKD 393
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARL-AYKRISTPDLVSQNAMLTAYAMHGHGKEG 417
+ ++ + VD+ + G LK A + +K P A+L A MH + K G
Sbjct: 394 YNVEPEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAKIG 451
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 136/295 (46%), Gaps = 1/295 (0%)
Query: 220 DLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRY 279
DLL+ + PT + S++ ACA +L + IH+ L D F+ +L+ MYC+
Sbjct: 51 DLLLTGELAPTPRVYHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCKC 110
Query: 280 QDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIIL 339
+ A+ FD I + + G+ N A+ L +ML P +T L
Sbjct: 111 GAVSDARHVFDGIPTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFL 170
Query: 340 SACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLV 399
A + G+Q+HA A++ D DV++G+AL+DMYA+C + A + + + + V
Sbjct: 171 KAAGACGGRGIGEQMHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDSKNEV 230
Query: 400 SQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM 459
S NA++ +A G G+ + F + +GF H ++ S SA G+++ G M
Sbjct: 231 SWNALIAGFARKGDGETTLMKFAEMQRNGFGATHFTYSSVFSALARIGALEQGRWVHAHM 290
Query: 460 AYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
K + ++ + +++G + +A + ++ D V W +L +G
Sbjct: 291 IKSGQKLTAFVANTILGMYAKSGSMVDARKVFDRVDQR-DLVTWNTMLTAFAQYG 344
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 109/244 (44%), Gaps = 9/244 (3%)
Query: 323 MLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGS 382
+L+ +L P I++AC+ + + +H++ R D + +L+ MY KCG+
Sbjct: 53 LLTGELAPTPRVYHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCKCGA 112
Query: 383 LKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSA 442
+ AR + I T D+VS ++T YA + E + +L + FRP +F S L A
Sbjct: 113 VSDARHVFDGIPTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKA 172
Query: 443 CVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVM 502
G G + L Y++ + + ++D+ +R ++ A + + + V
Sbjct: 173 AGACGGRGIGEQMHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLD-SKNEVS 231
Query: 503 WGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKD 562
W AL+ G G+ G+ + E++ N G A F Y+ +S LAR +
Sbjct: 232 WNALIAGFARKGD---GETTLMKFAEMQRNGFG-----ATHFTYSSVFSALARIGALEQG 283
Query: 563 RRMH 566
R +H
Sbjct: 284 RWVH 287
>gi|15235115|ref|NP_195663.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75210987|sp|Q9SVA5.1|PP357_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g39530
gi|5042169|emb|CAB44688.1| putative protein [Arabidopsis thaliana]
gi|7270937|emb|CAB80616.1| putative protein [Arabidopsis thaliana]
gi|332661682|gb|AEE87082.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 834
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 188/600 (31%), Positives = 314/600 (52%), Gaps = 69/600 (11%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y KCG + A K+F MP + N++S
Sbjct: 294 YVKCGRVIAAHKLFNGMPNK------------------------------------NIIS 317
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W+ ++ G+ QN +EA+ + M GL+P+ SS+L +CA L L G + H Y
Sbjct: 318 WTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTI 377
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
+ ++ +V N L+D+Y +C + A K+F F+ + V N +I GY
Sbjct: 378 KANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGY----------- 426
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
LG Q W EA ++FRD+ R I P+ TF S+L A
Sbjct: 427 -----SRLGTQ-----WE-----------LHEALNIFRDMRFR-LIRPSLLTFVSLLRAS 464
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK 301
A + SL K+IH L GL D F G AL+++Y L +++ FDE++ + ++
Sbjct: 465 ASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWN 524
Query: 302 MKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRC 361
G+ A+ LF E+ PD +T +++A +LA+++ G++ H ++
Sbjct: 525 SMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKR 584
Query: 362 GYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHF 421
G + + +I AL+DMYAKCGS + A A+ ++ D+V N+++++YA HG GK+ +
Sbjct: 585 GLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQML 644
Query: 422 RRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRA 481
++++ G P++I+F+ LSAC HAG ++ G + F+LM + ++P +HY CMV LL RA
Sbjct: 645 EKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRA 704
Query: 482 GELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLA 541
G L +A E I+K+P P +++W +LL GC GN+E + AA+ I +P ++G++ ML+
Sbjct: 705 GRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLS 764
Query: 542 NLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
N++A G W++ + R++MK + K PG SWI E+H F + D+SH ++ +IY ++D
Sbjct: 765 NIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLD 824
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 133/523 (25%), Positives = 225/523 (43%), Gaps = 79/523 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y + G + A+KVF+ MPER NLV
Sbjct: 88 LYSRAGGMVYARKVFEKMPER------------------------------------NLV 111
Query: 61 SWSAVIGGFTQNG-YDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLS--LGKEFH 117
SWS ++ +G Y+E + L + PN LSS + AC+ L + +
Sbjct: 112 SWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQ 171
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
++ ++GF + +V L+D Y + +GN+
Sbjct: 172 SFLVKSGFDRDVYVGTLLIDFYLK-------------------------------DGNID 200
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
AR +FD + ++ ++W +MISG V + +F L M D + P + +V
Sbjct: 201 YARLVFDALP----EKSTVTWTTMISGCVKMGRSYVSLQLFYQL-MEDNVVPDGYILSTV 255
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
L AC+ + L GK+IHA + GL+ D + L++ Y + ++AA F+ + N
Sbjct: 256 LSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNI 315
Query: 298 LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAY 357
+ G++ N AM+LF+ M L PD+Y IL++C+SL + G QVHAY
Sbjct: 316 ISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAY 375
Query: 358 AIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHG--- 414
I+ +D ++ +L+DMYAKC L AR + + D+V NAM+ Y+ G
Sbjct: 376 TIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWEL 435
Query: 415 KEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCM 474
E + FR + RP ++F+S L A S+ + LM Y + + + +
Sbjct: 436 HEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSAL 495
Query: 475 VDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
+D+ S L ++ ++ + D V+W ++ G V E
Sbjct: 496 IDVYSNCYCLKDSRLVFDEMKV-KDLVIWNSMFAGYVQQSENE 537
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 84/354 (23%), Positives = 176/354 (49%), Gaps = 19/354 (5%)
Query: 164 NTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLM 223
N +I Y G + AR++F++M +R ++SW++M+S + +Y+E+ +F +
Sbjct: 83 NILINLYSRAGGMVYARKVFEKMP----ERNLVSWSTMVSACNHHGIYEESLVVFLEFWR 138
Query: 224 RDGIEPTSFTFGSVLIACADMNSLRKGK----EIHALAIALGLQSDTFVGGALVEMYCRY 279
P + S + AC+ ++ +G+ ++ + + G D +VG L++ Y +
Sbjct: 139 TRKDSPNEYILSSFIQACSGLDG--RGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKD 196
Query: 280 QDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIIL 339
++ A++ FD + + G ++ ++QLF +++ ++ PD Y + +L
Sbjct: 197 GNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVL 256
Query: 340 SACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLV 399
SACS L +E GKQ+HA+ +R G + D + L+D Y KCG + A + + +++
Sbjct: 257 SACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNII 316
Query: 400 SQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM 459
S +L+ Y + KE + F + G +PD + S L++C ++ G++ +
Sbjct: 317 SWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQ----V 372
Query: 460 AYYDVKPSLKH----YTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
Y +K +L + ++D+ ++ L +A + + I A D V++ A++ G
Sbjct: 373 HAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARK-VFDIFAAADVVLFNAMIEG 425
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 121/276 (43%), Gaps = 36/276 (13%)
Query: 253 IHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVY 312
+H I GL+ DT++ L+ +Y R +V A+ F+++ E N+
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMP--------------ERNLV 111
Query: 313 TWNAMQ-------LFSEMLSLDL--------TPDIYTVGIILSACSSLATMERGK----Q 353
+W+ M ++ E L + L +P+ Y + + ACS L RG+ Q
Sbjct: 112 SWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDG--RGRWMVFQ 169
Query: 354 VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGH 413
+ ++ ++ G+D DV++GT L+D Y K G++ +ARL + + V+ M++ G
Sbjct: 170 LQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGR 229
Query: 414 GKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTC 473
+ F +++ PD + LSAC ++ G + + Y ++
Sbjct: 230 SYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNV 289
Query: 474 MVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
++D + G + A++ +P + + W LL G
Sbjct: 290 LIDSYVKCGRVIAAHKLFNGMP-NKNIISWTTLLSG 324
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 59/116 (50%), Gaps = 1/116 (0%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGS +DA K F RD V WNSV+++ A +G +AL+ LE+M S E PN +
Sbjct: 599 MYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIE-PNYI 657
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEF 116
++ V+ + G E+ + M G+EP ++ R +L+ +E
Sbjct: 658 TFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNKAREL 713
>gi|359487569|ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Vitis vinifera]
Length = 703
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 189/584 (32%), Positives = 317/584 (54%), Gaps = 29/584 (4%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y + G ++ A++VF MP++ VSWNS+V N EA ++M N VS
Sbjct: 26 YARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLFDKMPE-----RNTVS 80
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W+ +I G+ +N EA M E N + ++++ + +S + +
Sbjct: 81 WNGLISGYVKNRMVSEARKAFDTMP----ERNVVSWTAMVRGYVQEGLVSEAETLFWQMP 136
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
+S ++ GL+ V R + A +F +K+ V+ +I GYC+ G +AEARE
Sbjct: 137 EKNVVSWTVMLGGLIQVRR----IDEARGLFDIMPVKDVVARTNMISGYCQEGRLAEARE 192
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
LFD+M +R +ISW +MISGYV N D A +F + E ++ ++L+
Sbjct: 193 LFDEMP----RRNVISWTTMISGYVQNGQVDVARKLFEVM-----PEKNEVSWTAMLMGY 243
Query: 242 ADMNSLRKGKEIH-ALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
+ + E+ A+ + + + + G + + ++ A+ FD+I ++
Sbjct: 244 TQGGRIEEASELFDAMPVKAVVACNAMILG-----FGQNGEVAKARQVFDQIREKDDGTW 298
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
+E + A+ LF+ M + + ++ +LS C+SLA+++ G+QVHA ++
Sbjct: 299 SAMIKVYERKGFEVEALNLFALMQREGVQSNFPSLISVLSVCASLASLDHGRQVHAELVK 358
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
+DSDV + + L+ MY KCG L AR + R S D+V N+++T YA HG +E +
Sbjct: 359 SQFDSDVFVASVLITMYVKCGDLVKARQIFDRFSPKDIVMWNSIITGYAQHGLVEEALQV 418
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMVDLLS 479
F + +SG D ++F+ LSAC + G +K G E F+ M + Y V+P +HY CMVDLL
Sbjct: 419 FHEMCSSGMATDGVTFVGVLSACSYTGKVKEGLEIFESMKSKYLVEPKTEHYACMVDLLG 478
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
RAG + +A + I+K+P+ D+++WGALLG C +H N+ ++AA +L++LEP N G Y++
Sbjct: 479 RAGLVNDAMDLIQKMPVEADAIIWGALLGACRTHMNMNLAEVAAKKLLQLEPKNAGPYIL 538
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKF 583
L+N++A GRW D+A R+ M+ +++ KSPGCSWIE +H F
Sbjct: 539 LSNIYASKGRWGDVAELRRNMRVKKVSKSPGCSWIEVEKRVHMF 582
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/408 (22%), Positives = 167/408 (40%), Gaps = 37/408 (9%)
Query: 133 NGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQ 192
N + Y R G + SA ++F + K VS N+++ GY +N EAR LFD+M +
Sbjct: 20 NSQIARYARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLFDKMP----E 75
Query: 193 RGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV---LIACAD------ 243
R +SWN +ISGYV N + EA F + R+ + T+ G V L++ A+
Sbjct: 76 RNTVSWNGLISGYVKNRMVSEARKAFDTMPERNVVSWTAMVRGYVQEGLVSEAETLFWQM 135
Query: 244 --------------MNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAF 289
+ +R+ E L + ++ D ++ YC+ L A+ F
Sbjct: 136 PEKNVVSWTVMLGGLIQVRRIDEARGLFDIMPVK-DVVARTNMISGYCQEGRLAEARELF 194
Query: 290 DEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATME 349
DE+ + G+ N A +LF M + ++ +++ E
Sbjct: 195 DEMPRRNVISWTTMISGYVQNGQVDVARKLFEVMPEKN---EVSWTAMLMGYTQGGRIEE 251
Query: 350 RGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYA 409
+ A ++ V A++ + + G + AR + +I D + +AM+ Y
Sbjct: 252 ASELFDAMPVKA-----VVACNAMILGFGQNGEVAKARQVFDQIREKDDGTWSAMIKVYE 306
Query: 410 MHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLK 469
G E + F + G + + S +S LS C S+ G + + +
Sbjct: 307 RKGFEVEALNLFALMQREGVQSNFPSLISVLSVCASLASLDHGRQVHAELVKSQFDSDVF 366
Query: 470 HYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
+ ++ + + G+L +A + + D VMW +++ G HG +E
Sbjct: 367 VASVLITMYVKCGDLVKARQIFDRFS-PKDIVMWNSIITGYAQHGLVE 413
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG L A+++F +D V WNS++T A +GLV EAL+ M S T V
Sbjct: 374 MYVKCGDLVKARQIFDRFSPKDIVMWNSIITGYAQHGLVEEALQVFHEMCSSGMATDG-V 432
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGL-EPNA 94
++ V+ + G +E + + M+++ L EP
Sbjct: 433 TFVGVLSACSYTGKVKEGLEIFESMKSKYLVEPKT 467
>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49170, chloroplastic-like [Cucumis sativus]
Length = 849
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 182/577 (31%), Positives = 310/577 (53%), Gaps = 40/577 (6%)
Query: 23 CVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGML 82
CV + G ++ A + E+M N V+W+ +I Q GY EAI +
Sbjct: 205 CVGCGLIDMFVKGRGDLVSAFKVFEKMPE-----RNAVTWTLMITRLMQFGYAGEAIDLF 259
Query: 83 FRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRC 142
M G EP+ TLS V+ ACA ++ L LG++ H R+G + V L+++Y +C
Sbjct: 260 LDMIFSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKC 319
Query: 143 GDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMI 202
+G++ AR++FDQ+ + + SW +MI
Sbjct: 320 S----------------------------VDGSMCAARKIFDQI----LDHNVFSWTAMI 347
Query: 203 SGYVDNSLYDE-AFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALG 261
+GYV YDE A +FR +++ I P FTF S L ACA++ +LR G+++ A+ LG
Sbjct: 348 TGYVQKGGYDEEALDLFRGMILTHVI-PNHFTFSSTLKACANLAALRIGEQVFTHAVKLG 406
Query: 262 LQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFS 321
S V +L+ MY R + A+ AFD + + D + N+ + A++LF+
Sbjct: 407 FSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFN 466
Query: 322 EMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCG 381
E+ + +T +LS +S+ T+ +G+Q+HA I+ G + + AL+ MY++CG
Sbjct: 467 EIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCG 526
Query: 382 SLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALS 441
+++ A ++ + +++S +++T +A HG + + F ++L G RP+ +++++ LS
Sbjct: 527 NIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNEVTYIAVLS 586
Query: 442 ACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDS 500
AC H G + G + F M + V P ++HY C+VD+L R+G L EA +FI +P D+
Sbjct: 587 ACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACIVDILGRSGSLSEAIQFINSMPYKADA 646
Query: 501 VMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKM 560
++W LG C HGNLE G+ AA +IE EP++ Y++L+NL+A +W +++ R+ M
Sbjct: 647 LVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYASISKWDEVSNIRKAM 706
Query: 561 KDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
K++ + K GCSW+E +++HKF D SH ++ EIY
Sbjct: 707 KEKXLIKEAGCSWVEVENKVHKFYVGDTSHPKAAEIY 743
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 129/515 (25%), Positives = 228/515 (44%), Gaps = 75/515 (14%)
Query: 20 ERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAI 79
+ D V+ NS+++ + G +A M S + +L+SWSA++ F N A+
Sbjct: 98 QLDSVTLNSLISLYSKCGQWEKATSIFRLMGS----SRDLISWSAMVSCFANNNMGFRAL 153
Query: 80 GMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVN-GLVDV 138
M G PN ++ AC+ + +S+G G++ + G++ + V GL+D+
Sbjct: 154 LTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDM 213
Query: 139 YRRC-GDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIIS 197
+ + GD++SA K+F K +N V+
Sbjct: 214 FVKGRGDLVSAFKVFEKMPERNAVT----------------------------------- 238
Query: 198 WNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALA 257
W MI+ + EA +F D++ G EP FT V+ ACA+M L G+++H+ A
Sbjct: 239 WTLMITRLMQFGYAGEAIDLFLDMIF-SGYEPDRFTLSGVISACANMELLLLGQQLHSQA 297
Query: 258 IALGLQSDTFVGGALVEMYCRYQ---DLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTW 314
I GL D VG L+ MY + + AA+ FD+I + NV++W
Sbjct: 298 IRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQI--------------LDHNVFSW 343
Query: 315 NAM---------------QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
AM LF M+ + P+ +T L AC++LA + G+QV +A+
Sbjct: 344 TAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAV 403
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
+ G+ S + +L+ MYA+ G + AR A+ + +L+S N ++ AYA + + +E +
Sbjct: 404 KLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALE 463
Query: 420 HFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLS 479
F I G +F S LS G+I G + + +K + ++ + S
Sbjct: 464 LFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYS 523
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
R G + A++ + + + + W +++ G HG
Sbjct: 524 RCGNIESAFQVFEDME-DRNVISWTSIITGFAKHG 557
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 133/556 (23%), Positives = 242/556 (43%), Gaps = 81/556 (14%)
Query: 55 ETPNLVSWSAVIGGFTQ---NGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLS 111
+ P + + + G Q NG +AI L M +G P+ +T S L C R +
Sbjct: 24 QFPTFTNPNPLTGRLIQEINNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFD 83
Query: 112 LGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYC 171
+G H +T++ + +N L+ +Y +CG A IF
Sbjct: 84 IGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIF------------------- 124
Query: 172 ENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTS 231
+G R +ISW++M+S + +N++ A F D++ +G P
Sbjct: 125 ---------------RLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMI-ENGYYPNE 168
Query: 232 FTFGSVLIACADMNSLRKGKEIHALAIALG-LQSDTFVGGALVEMYCRYQ-DLVAAQMAF 289
+ F + AC+ + G I I G LQSD VG L++M+ + + DLV+A F
Sbjct: 169 YCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVF 228
Query: 290 DEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATME 349
+++ + + Y A+ LF +M+ PD +T+ ++SAC+++ +
Sbjct: 229 EKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACANMELLL 288
Query: 350 RGKQVHAYAIRCGYDSDVHIGTALVDMYAKC---GSLKHARLAYKRISTPDLVSQNAMLT 406
G+Q+H+ AIR G D +G L++MYAKC GS+ AR + +I ++ S AM+T
Sbjct: 289 LGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMIT 348
Query: 407 AYAMH-GHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFF--------- 456
Y G+ +E + FR ++ + P+H +F S L AC + +++ G + F
Sbjct: 349 GYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFS 408
Query: 457 --------------------DLMAYYDV--KPSLKHYTCMVDLLSRAGELGEAYEFIKKI 494
D +D+ + +L Y ++D ++ EA E +I
Sbjct: 409 SVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEI 468
Query: 495 P---MAPDSVMWGALLGGCVSHGNLEFGQIAADRLIE--LEPNNTGNYVMLANLFAYAGR 549
M + + +LL G S G + G+ R+I+ L+ N + +++ +++ G
Sbjct: 469 EDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALIS-MYSRCGN 527
Query: 550 WSDLARTRQKMKDRRM 565
+ + M+DR +
Sbjct: 528 IESAFQVFEDMEDRNV 543
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 106/390 (27%), Positives = 168/390 (43%), Gaps = 75/390 (19%)
Query: 1 MYGKC---GSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETP 57
MY KC GS+ A+K+F + + + SW +++T
Sbjct: 315 MYAKCSVDGSMCAARKIFDQILDHNVFSWTAMIT-------------------------- 348
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
G + GYDEEA+ + M + PN T SS L ACA L L +G++
Sbjct: 349 ---------GYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVF 399
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
+ + GF S V N L+ +Y R G + A K F KN +S NT+I Y +N N
Sbjct: 400 THAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSE 459
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
EA ELF+++E G+ ++FTF S+
Sbjct: 460 EALELFNEIED------------------------------------QGMGASAFTFASL 483
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
L A + ++ KG++IHA I GL+ + V AL+ MY R ++ +A F+++E+
Sbjct: 484 LSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNV 543
Query: 298 LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG-KQVHA 356
+ GF + + A++LF +ML + P+ T +LSACS + + G K +
Sbjct: 544 ISWTSIITGFAKHGFATQALELFHKMLEEGVRPNEVTYIAVLSACSHVGLVNEGWKHFKS 603
Query: 357 YAIRCGYDSDVHIGTALVDMYAKCGSLKHA 386
G + +VD+ + GSL A
Sbjct: 604 MYTEHGVIPRMEHYACIVDILGRSGSLSEA 633
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 81/194 (41%), Gaps = 42/194 (21%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +CG+++ A +VF+ M +R+ +SW S++T A +G +ALE +M
Sbjct: 521 MYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLE--------- 571
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLG-KEFHGY 119
EG+ PN T +VL AC+ + ++ G K F
Sbjct: 572 ---------------------------EGVRPNEVTYIAVLSACSHVGLVNEGWKHFKSM 604
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCE-NGNVA- 177
T +G + +VD+ R G + A++ + K + +G C +GN+
Sbjct: 605 YTEHGVIPRMEHYACIVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGACRVHGNLEL 664
Query: 178 ---EARELFDQMEH 188
A+ + +Q H
Sbjct: 665 GKHAAKMIIEQEPH 678
>gi|218194084|gb|EEC76511.1| hypothetical protein OsI_14286 [Oryza sativa Indica Group]
Length = 656
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 188/597 (31%), Positives = 316/597 (52%), Gaps = 30/597 (5%)
Query: 22 DCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGM 81
+C N +V + G + +AL+ +RM N+V+W++V+ G T+NG E A+ M
Sbjct: 51 ECKRLNRLVKS----GRLADALDLFDRMPR-----KNVVAWTSVMSGCTRNGRPEAALAM 101
Query: 82 LFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRR 141
M G+ PN ++ L ACA L L G++ H R GF + ++ + L+++Y R
Sbjct: 102 FADMVESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSR 161
Query: 142 CGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSM 201
CG + +A ++F + + V ++I +C NG A E QM G++ + ++
Sbjct: 162 CGSLPAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTI 221
Query: 202 -----------ISGYVDNSLYDEAFSMFRDLLMRD------GIEPTSFTFGSVLIACADM 244
I GY+ + + S++ + D G++P F VL AC
Sbjct: 222 LTACPRVLGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNEGVDPNEFALSIVLGACG-- 279
Query: 245 NSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKE 304
S+ G+++H AI L +D V AL+ MY R + + ++IEN + +
Sbjct: 280 -SIGLGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAI 338
Query: 305 DGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYD 364
N + A+ L +M S TP+ Y +LS+C+ +A++++G Q H A++ G D
Sbjct: 339 SANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCD 398
Query: 365 SDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRI 424
S++ G AL++MY+KCG + ARLA+ + T D+ S N+++ +A HG + + F ++
Sbjct: 399 SEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKM 458
Query: 425 LASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLLSRAGE 483
++G +PD +FL L C H+G ++ G FF LM Y P+ HY CM+D+L R G
Sbjct: 459 RSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGR 518
Query: 484 LGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANL 543
EA I +P PD+++W LL C H NL+ G++AADRL+EL ++ +YV+++N+
Sbjct: 519 FDEALRMINDMPFEPDALIWKTLLASCKLHRNLDIGKLAADRLMELSDRDSASYVLMSNI 578
Query: 544 FAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTII 600
+A G W D + R++M + + K GCSWIE +E+H F + D SH S+ IY ++
Sbjct: 579 YAMHGEWEDARKVRRRMDETGVKKDAGCSWIEINNEVHTFASRDMSHPNSDSIYQML 635
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 108/437 (24%), Positives = 187/437 (42%), Gaps = 72/437 (16%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +CGSL AK+VF M D V + S+++A
Sbjct: 158 MYSRCGSLPAAKEVFDRMDSPDVVGYTSLISA---------------------------- 189
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
F +NG E A L +M +GL+PN T++++L AC R+ LG++ HGY+
Sbjct: 190 --------FCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRV----LGQQIHGYL 237
Query: 121 TRN-GFMSNP-FVVNGLVDVYRR-----------------CGDMLSALKIFSKFSIKNEV 161
+ G S + L+D Y R CG + ++ +IK+++
Sbjct: 238 IKKIGLRSQSVYSSTALIDFYSRNEGVDPNEFALSIVLGACGSIGLGRQLHCS-AIKHDL 296
Query: 162 -----SCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFS 216
N ++ Y G V E + +++E+ ++SW + IS N ++A +
Sbjct: 297 ITDIRVSNALLSMYGRTGLVEELEAMLNKIEN----PDLVSWTTAISANFQNGFGEKAIA 352
Query: 217 MFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMY 276
+ + +G P + F SVL +CAD+ SL +G + H LA+ LG S+ G AL+ MY
Sbjct: 353 LLCQ-MHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMY 411
Query: 277 CRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVG 336
+ + +A++AFD + + G + A+++FS+M S + PD T
Sbjct: 412 SKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFL 471
Query: 337 IILSACSSLATMERGKQVHAYAI-RCGYDSDVHIGTALVDMYAKCGSLKHA-RLAYKRIS 394
+L C+ +E G+ I + + ++DM + G A R+
Sbjct: 472 GVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPF 531
Query: 395 TPDLVSQNAMLTAYAMH 411
PD + +L + +H
Sbjct: 532 EPDALIWKTLLASCKLH 548
>gi|38606535|emb|CAE06013.3| OSJNBa0016O02.23 [Oryza sativa Japonica Group]
gi|116310014|emb|CAH67039.1| OSIGBa0124N08.1 [Oryza sativa Indica Group]
gi|116310420|emb|CAH67428.1| OSIGBa0150F01.8 [Oryza sativa Indica Group]
Length = 939
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 192/598 (32%), Positives = 309/598 (51%), Gaps = 74/598 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +CG +D A +VF+ + ++D +SWNS+ L C
Sbjct: 308 MYARCGWVDSALRVFREIGDKDYISWNSM-------------LSC--------------- 339
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+ QN EAI M G P+ + S+L A L +L G+E H Y
Sbjct: 340 --------YVQNRLYAEAIDFFGEMVQNGFNPDHACIVSLLSAVGHLGRLINGREVHAYA 391
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ S+ + N L+D+Y +C + + ++F + IK+ VS
Sbjct: 392 VKQRLDSDLQIANTLMDMYIKCYSVECSARVFDRMRIKDHVS------------------ 433
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
W ++I+ Y +S Y EA FR ++GI+ GS+L A
Sbjct: 434 -----------------WTTIIACYAQSSRYSEAIGKFRTA-QKEGIKVDPMMMGSILEA 475
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C+ + S+ K++H+ AI GL D + ++++Y ++ A F+ ++ + +
Sbjct: 476 CSGLKSISLLKQVHSYAIRNGLL-DLILKNRIIDIYGECGEVCYALNIFEMLDKKDIVTW 534
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
+ F N A+ LF +ML+ + PD + IL A + L+++ +GK++H + IR
Sbjct: 535 TSMVNCFAENGLLHEAVALFGKMLNAGIQPDSVALVGILGAIAGLSSLTKGKEIHGFLIR 594
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
+ + + ++LVDMY+ CGS+ +A + D+V AM+ A MHGHGK+ I
Sbjct: 595 GKFPVEGAVVSSLVDMYSGCGSMNYALKVFDEAKCKDVVLWTAMINATGMHGHGKQAIYI 654
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMVDLLS 479
F+R+L +G PDH+SFL+ L AC H+ + G + D+M + Y ++P +HY C+VDLL
Sbjct: 655 FKRMLETGVSPDHVSFLALLYACSHSKLVDEGKFYLDMMVSKYKLQPWQEHYACVVDLLG 714
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
R+G+ EAY+FIK +P+ P SV+W ALLG C H N E IA D+L+ELEP+N GNYV+
Sbjct: 715 RSGQTEEAYKFIKSMPLEPKSVVWCALLGACRIHKNHELAMIATDKLLELEPDNPGNYVL 774
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
++N+FA G+W+++ R KM ++ + K P CSWIE + +H F A D SH S+ I+
Sbjct: 775 VSNVFAEMGKWNNVKEIRTKMTEQGLRKDPACSWIEIGNTVHTFTARDHSHRDSQAIH 832
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 156/559 (27%), Positives = 227/559 (40%), Gaps = 113/559 (20%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKCG L DA ++F MP R SWN
Sbjct: 102 MYGKCGRLPDAHRLFDGMPARTVFSWN--------------------------------- 128
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE----GLEPNARTLSSVLPACARLQKLSLGKEF 116
A+IG +G EA+G+ M+A G P+ TL+SVL AC G E
Sbjct: 129 ---ALIGACLSSGGAGEAVGVYRAMRASEPVAGAAPDGCTLASVLKACGAEGDGRCGSEV 185
Query: 117 HGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNV 176
HG ++G + V N LV +Y +CG + SAL++F
Sbjct: 186 HGLAVKSGLDRSTLVANALVGMYAKCGLLDSALRVF------------------------ 221
Query: 177 AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGS 236
E + R + SWNS ISG V N ++ EA +FR + DG S+T
Sbjct: 222 ----------EWMRDGRDVASWNSAISGCVQNGMFLEALDLFRRM-QSDGFSMNSYTTVG 270
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
VL CA++ L G+E+HA + G + + AL+ MY R + +A F EI + +
Sbjct: 271 VLQVCAELAQLNHGRELHAALLKCGTEFNIQCN-ALLVMYARCGWVDSALRVFREIGDKD 329
Query: 297 NLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHA 356
+ + N A+ F EM+ PD + +LSA L + G++VHA
Sbjct: 330 YISWNSMLSCYVQNRLYAEAIDFFGEMVQNGFNPDHACIVSLLSAVGHLGRLINGREVHA 389
Query: 357 YAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKE 416
YA++ DSD+ I L+DMY KC S++ + + R+ D VS ++ YA E
Sbjct: 390 YAVKQRLDSDLQIANTLMDMYIKCYSVECSARVFDRMRIKDHVSWTTIIACYAQSSRYSE 449
Query: 417 GIAHFRRILASGFRPDHISFLSALSAC-----------VHAGSIKTGSEFFDLMAYYDV- 464
I FR G + D + S L AC VH+ +I+ G DL+ +
Sbjct: 450 AIGKFRTAQKEGIKVDPMMMGSILEACSGLKSISLLKQVHSYAIRNG--LLDLILKNRII 507
Query: 465 --------------------KPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMA---PDSV 501
K + +T MV+ + G L EA K+ A PDSV
Sbjct: 508 DIYGECGEVCYALNIFEMLDKKDIVTWTSMVNCFAENGLLHEAVALFGKMLNAGIQPDSV 567
Query: 502 MWGALLGGCVSHGNLEFGQ 520
+LG +L G+
Sbjct: 568 ALVGILGAIAGLSSLTKGK 586
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 114/253 (45%), Gaps = 23/253 (9%)
Query: 224 RDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDT---FVGGALVEMYCRYQ 280
R P + +G VL A ++ +G+++HA A+A G D F+ L+ MY +
Sbjct: 48 RGRAPPPTDHYGWVLDLVAVRRAVSEGRQLHAHAVATGALGDDDAGFLATKLLFMYGKCG 107
Query: 281 DLVAAQMAFD-----EIENIENLLGK-MKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYT 334
L A FD + + L+G + G V + AM+ SE ++ PD T
Sbjct: 108 RLPDAHRLFDGMPARTVFSWNALIGACLSSGGAGEAVGVYRAMRA-SEPVA-GAAPDGCT 165
Query: 335 VGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS 394
+ +L AC + G +VH A++ G D + ALV MYAKCG L A ++ +
Sbjct: 166 LASVLKACGAEGDGRCGSEVHGLAVKSGLDRSTLVANALVGMYAKCGLLDSALRVFEWMR 225
Query: 395 T-PDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSAC---------- 443
D+ S N+ ++ +G E + FRR+ + GF + + + L C
Sbjct: 226 DGRDVASWNSAISGCVQNGMFLEALDLFRRMQSDGFSMNSYTTVGVLQVCAELAQLNHGR 285
Query: 444 -VHAGSIKTGSEF 455
+HA +K G+EF
Sbjct: 286 ELHAALLKCGTEF 298
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 80/192 (41%), Gaps = 7/192 (3%)
Query: 330 PDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIG---TALVDMYAKCGSLKHA 386
P G +L + + G+Q+HA+A+ G D G T L+ MY KCG L A
Sbjct: 53 PPTDHYGWVLDLVAVRRAVSEGRQLHAHAVATGALGDDDAGFLATKLLFMYGKCGRLPDA 112
Query: 387 RLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILAS----GFRPDHISFLSALSA 442
+ + + S NA++ A G E + +R + AS G PD + S L A
Sbjct: 113 HRLFDGMPARTVFSWNALIGACLSSGGAGEAVGVYRAMRASEPVAGAAPDGCTLASVLKA 172
Query: 443 CVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVM 502
C G + GSE L + S +V + ++ G L A + + D
Sbjct: 173 CGAEGDGRCGSEVHGLAVKSGLDRSTLVANALVGMYAKCGLLDSALRVFEWMRDGRDVAS 232
Query: 503 WGALLGGCVSHG 514
W + + GCV +G
Sbjct: 233 WNSAISGCVQNG 244
>gi|225436612|ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Vitis vinifera]
Length = 694
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 188/599 (31%), Positives = 313/599 (52%), Gaps = 74/599 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC +DA K+F MPERD +
Sbjct: 150 MYAKCNVFEDAIKLFDEMPERD------------------------------------VA 173
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ VI + Q+G E+A+ + M+ G +P++ TL++V+ +CARL L GKE H +
Sbjct: 174 SWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMEL 233
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R+GF + FV + LVD+Y +CG C + A+
Sbjct: 234 VRSGFALDGFVSSALVDMYGKCG---------------------------C----LEMAK 262
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
E+F+Q++ ++ ++SWNSMI+GY +FR + +GI PT T S+L+A
Sbjct: 263 EVFEQIQ----RKNVVSWNSMIAGYSLKGDSKSCIELFRRM-DEEGIRPTLTTLSSILMA 317
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C+ +L+ GK IH I +++D FV +L+++Y + ++ +A+ F + +
Sbjct: 318 CSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSW 377
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
+ G+ A+ +F++M + PD T +L ACS LA +E+GK++H + I
Sbjct: 378 NVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIE 437
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
+ + + AL+DMYAKCG++ A + ++ D VS +M+ AY HG E +
Sbjct: 438 SKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKL 497
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFD-LMAYYDVKPSLKHYTCMVDLLS 479
F ++ S +PD ++FL+ LSAC HAG + G +F+ ++A Y KP+++HY+C++DLL
Sbjct: 498 FEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLG 557
Query: 480 RAGELGEAYEFIKKIP-MAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYV 538
R G L EAYE +++ P + D + L C H L+ G+ LIE +P++ Y+
Sbjct: 558 RVGRLREAYEILQRTPDIREDVGLLSTLFSACHLHKKLDLGEQIGRLLIEKDPDDPSTYI 617
Query: 539 MLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
+L+N++A +W ++ + R K+K+ + K+PGCSWIE IH F D+SH +++ IY
Sbjct: 618 ILSNMYASVKKWDEVRKVRLKIKELGLKKNPGCSWIEVGKRIHPFVVEDKSHPQADMIY 676
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 115/428 (26%), Positives = 194/428 (45%), Gaps = 45/428 (10%)
Query: 93 NARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIF 152
+ L S+L C + L GK H I G +N + L+++Y C SA +F
Sbjct: 2 DTTKLLSLLKTCIDSKYLKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVF 61
Query: 153 SKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYD 212
+I+N + I WN +++ N ++
Sbjct: 62 Q--TIENPLD--------------------------------ITLWNGLMAACTKNFIFI 87
Query: 213 EAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGAL 272
E +F LL ++P +FT+ SVL AC+ + + GK +H I G D V +
Sbjct: 88 EGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSA 147
Query: 273 VEMYCRYQDLVAAQMAFDE-----IENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLD 327
V MY + A FDE + + N++ +DG +P A++LF EM
Sbjct: 148 VGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDG-QPE----KALELFEEMKVSG 202
Query: 328 LTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHAR 387
PD T+ ++S+C+ L +ERGK++H +R G+ D + +ALVDMY KCG L+ A+
Sbjct: 203 FKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAK 262
Query: 388 LAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAG 447
+++I ++VS N+M+ Y++ G K I FRR+ G RP + S L AC +
Sbjct: 263 EVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSV 322
Query: 448 SIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALL 507
+++ G + V+ + + ++DL + G +G A + +P + V W ++
Sbjct: 323 NLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMP-KTNVVSWNVMI 381
Query: 508 GGCVSHGN 515
G V G+
Sbjct: 382 SGYVKVGS 389
>gi|413944893|gb|AFW77542.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 829
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 179/548 (32%), Positives = 306/548 (55%), Gaps = 44/548 (8%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
+V W+ +I + Q+GY +EA+ + M G +P+ TLSS+L AC L LG++ H
Sbjct: 219 TVVVWTLLITRYAQSGYSDEAVELFLDMLENGFQPDQYTLSSMLSACTELGSFRLGQQLH 278
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG-NV 176
R G S+ V GLVD+Y + NG ++
Sbjct: 279 SLALRLGLESDSCVSCGLVDMYAKS-----------------------------HNGQSL 309
Query: 177 AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGS 236
ARE+F++M + +++W +++SGYV D + ++ +GI P T+ S
Sbjct: 310 HNAREVFNRMP----KHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHITYSS 365
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI--EN 294
+L ACA++ G++IH + L VG ALV MY + A+ AFD++ +N
Sbjct: 366 MLKACANLGDQDSGRQIHTHCVKSNLADLNVVGNALVSMYAESGSIEEARHAFDQLYEKN 425
Query: 295 IENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV 354
+ + G + DG N Y ++ ++L +T G ++SA +S+ + +G+++
Sbjct: 426 MVSFSGNLDGDG-RSNTYQDYQIE------RMELGISTFTFGSLISAAASVGMLTKGQRL 478
Query: 355 HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHG 414
HA +++ G+ SD IG +LV MY++CG L A + ++ +++S +M++ A HG+
Sbjct: 479 HALSLKAGFGSDRAIGNSLVSMYSRCGYLVDACQVFDEMNDHNVISWTSMISGLAKHGYA 538
Query: 415 KEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTC 473
+ F ++A+G +P+ +++++ LSAC HAG +K G E F +M ++ + P ++HY C
Sbjct: 539 ARALELFHDMIAAGVKPNDVTYIAVLSACSHAGLVKEGKEHFRMMQKHHGLIPRMEHYAC 598
Query: 474 MVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNN 533
MVDLL R+G + +A +FI ++P D+++W LLG C +H N++ G+IAA+ +I+LEP +
Sbjct: 599 MVDLLGRSGLVEDALDFINEMPCQVDALVWKTLLGACKTHNNMDIGEIAANHVIQLEPQD 658
Query: 534 TGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRS 593
YV+L+NL+A AG W +AR R M+D+ + K G SW+ + IH+FRA D SH ++
Sbjct: 659 PAPYVLLSNLYAEAGLWDQVARIRSLMRDKNLMKEKGLSWMHVDNTIHEFRAGDTSHPQA 718
Query: 594 EEIYTIID 601
EEIYT ++
Sbjct: 719 EEIYTKLE 726
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 133/503 (26%), Positives = 225/503 (44%), Gaps = 55/503 (10%)
Query: 20 ERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAI 79
E D V NS++T + V A + M +LVSW+A+ ++NG + EA+
Sbjct: 81 ETDAVVANSLLTLYSKCSAVAAARSVFDGMPV---GLRDLVSWTAMASCLSRNGAEAEAL 137
Query: 80 GMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVY 139
+ EGL PNA TL + AC F S F + G
Sbjct: 138 RLFGETLEEGLLPNAFTLCAATQAC--------------------FASELFHLAG----- 172
Query: 140 RRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWN 199
G +L + + V C +I + +NG++ R +FD + +R ++ W
Sbjct: 173 ---GAVLGLVFKLGFWGTDVSVGC-ALIDMFAKNGDLVAMRRVFDGL----FERTVVVWT 224
Query: 200 SMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIA 259
+I+ Y + DEA +F D+L +G +P +T S+L AC ++ S R G+++H+LA+
Sbjct: 225 LLITRYAQSGYSDEAVELFLDML-ENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALR 283
Query: 260 LGLQSDTFVGGALVEMYCRY---QDLVAAQMAFDEI--ENI---ENLLGKMKEDGFEPNV 311
LGL+SD+ V LV+MY + Q L A+ F+ + N+ LL + G + N
Sbjct: 284 LGLESDSCVSCGLVDMYAKSHNGQSLHNAREVFNRMPKHNVMAWTALLSGYVQRGSQDN- 342
Query: 312 YTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGT 371
M LF +ML+ + P+ T +L AC++L + G+Q+H + ++ +G
Sbjct: 343 ---QVMILFCKMLNEGIRPNHITYSSMLKACANLGDQDSGRQIHTHCVKSNLADLNVVGN 399
Query: 372 ALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRP 431
ALV MYA+ GS++ AR A+ ++ ++VS + L G G+ +I
Sbjct: 400 ALVSMYAESGSIEEARHAFDQLYEKNMVSFSGNLD-----GDGRSNTYQDYQIERMELGI 454
Query: 432 DHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFI 491
+F S +SA G + G L +V + SR G L +A +
Sbjct: 455 STFTFGSLISAAASVGMLTKGQRLHALSLKAGFGSDRAIGNSLVSMYSRCGYLVDACQVF 514
Query: 492 KKIPMAPDSVMWGALLGGCVSHG 514
++ + + W +++ G HG
Sbjct: 515 DEMN-DHNVISWTSMISGLAKHG 536
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 174/355 (49%), Gaps = 44/355 (12%)
Query: 110 LSLGKEFHGYITRNGFM--SNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTII 167
+ LG+ G++ R G + ++ V N L+ +Y +C
Sbjct: 63 IHLGRALQGHLLRTGSLLETDAVVANSLLTLYSKC------------------------- 97
Query: 168 VGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGI 227
VA AR +FD M +G+ R ++SW +M S N EA +F + L +G+
Sbjct: 98 ------SAVAAARSVFDGMP-VGL-RDLVSWTAMASCLSRNGAEAEALRLFGETL-EEGL 148
Query: 228 EPTSFTFGSVLIAC--ADMNSLRKGKEIHALAIALGL-QSDTFVGGALVEMYCRYQDLVA 284
P +FT + AC +++ L G + L LG +D VG AL++M+ + DLVA
Sbjct: 149 LPNAFTLCAATQACFASELFHL-AGGAVLGLVFKLGFWGTDVSVGCALIDMFAKNGDLVA 207
Query: 285 AQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSS 344
+ FD + ++ + + + Y+ A++LF +ML PD YT+ +LSAC+
Sbjct: 208 MRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVELFLDMLENGFQPDQYTLSSMLSACTE 267
Query: 345 LATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKC---GSLKHARLAYKRISTPDLVSQ 401
L + G+Q+H+ A+R G +SD + LVDMYAK SL +AR + R+ ++++
Sbjct: 268 LGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYAKSHNGQSLHNAREVFNRMPKHNVMAW 327
Query: 402 NAMLTAYAMHG-HGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEF 455
A+L+ Y G + + F ++L G RP+HI++ S L AC + G +G +
Sbjct: 328 TALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHITYSSMLKACANLGDQDSGRQI 382
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 131/285 (45%), Gaps = 26/285 (9%)
Query: 247 LRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFD-------EIENIENLL 299
L + + H L L++D V +L+ +Y + + AA+ FD ++ + +
Sbjct: 65 LGRALQGHLLRTGSLLETDAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWTAMA 124
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSAC-SSLATMERGKQVHAYA 358
+ +G E A++LF E L L P+ +T+ AC +S G V
Sbjct: 125 SCLSRNGAEAE-----ALRLFGETLEEGLLPNAFTLCAATQACFASELFHLAGGAVLGLV 179
Query: 359 IRCGY-DSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEG 417
+ G+ +DV +G AL+DM+AK G L R + + +V ++T YA G+ E
Sbjct: 180 FKLGFWGTDVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEA 239
Query: 418 IAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTC---- 473
+ F +L +GF+PD + S LSAC GS + G + L ++ L+ +C
Sbjct: 240 VELFLDMLENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLA----LRLGLESDSCVSCG 295
Query: 474 MVDLLSRA---GELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
+VD+ +++ L A E ++P + + W ALL G V G+
Sbjct: 296 LVDMYAKSHNGQSLHNAREVFNRMP-KHNVMAWTALLSGYVQRGS 339
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 101/207 (48%), Gaps = 12/207 (5%)
Query: 24 VSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQ-NGYDEEAIGML 82
V N++V+ A +G + EA +++ N+VS+S + G + N Y + I
Sbjct: 396 VVGNALVSMYAESGSIEEARHAFDQLYE-----KNMVSFSGNLDGDGRSNTYQDYQIE-- 448
Query: 83 FRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRC 142
RM+ L + T S++ A A + L+ G+ H + GF S+ + N LV +Y RC
Sbjct: 449 -RME---LGISTFTFGSLISAAASVGMLTKGQRLHALSLKAGFGSDRAIGNSLVSMYSRC 504
Query: 143 GDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMI 202
G ++ A ++F + + N +S ++I G ++G A A ELF M GV+ +++ +++
Sbjct: 505 GYLVDACQVFDEMNDHNVISWTSMISGLAKHGYAARALELFHDMIAAGVKPNDVTYIAVL 564
Query: 203 SGYVDNSLYDEAFSMFRDLLMRDGIEP 229
S L E FR + G+ P
Sbjct: 565 SACSHAGLVKEGKEHFRMMQKHHGLIP 591
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 69/176 (39%), Gaps = 37/176 (21%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +CG L DA +VF M + + +SW S+++ A +G ALE
Sbjct: 500 MYSRCGYLVDACQVFDEMNDHNVISWTSMISGLAKHGYAARALE---------------- 543
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKE-FHGY 119
+ M A G++PN T +VL AC+ + GKE F
Sbjct: 544 --------------------LFHDMIAAGVKPNDVTYIAVLSACSHAGLVKEGKEHFRMM 583
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGN 175
+G + +VD+ R G + AL ++ + + ++G C+ N
Sbjct: 584 QKHHGLIPRMEHYACMVDLLGRSGLVEDALDFINEMPCQVDALVWKTLLGACKTHN 639
>gi|296083884|emb|CBI24272.3| unnamed protein product [Vitis vinifera]
Length = 729
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 195/606 (32%), Positives = 309/606 (50%), Gaps = 86/606 (14%)
Query: 36 NGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNAR 95
G V +A ++MS N+ SW+A++ + G EE I + + M EG+ P+
Sbjct: 58 TGCVEDARRMFDKMSE-----RNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHF 112
Query: 96 TLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKF 155
V AC+ L+ +GK+ + Y+ GF N V ++D++ +CG M A + F +
Sbjct: 113 VFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEI 172
Query: 156 SIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAF 215
K+ N ++ GY G +A +F +M
Sbjct: 173 EFKDVFMWNIMVSGYTSKGEFKKALNVFRKM----------------------------- 203
Query: 216 SMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIAL-GLQSDTFVGGALVE 274
+ +G++P S T S + AC +++ LR G+EIH I + L SD VG +LV+
Sbjct: 204 -------VLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVD 256
Query: 275 MYCRYQDLVAAQMAFDEIENIE----NLL-----------GKMKEDGFE----------- 308
Y + + + A+ F I+ + N + GK + F+
Sbjct: 257 YYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIACSVFSE 316
Query: 309 ---PNVYTW--------------NAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG 351
+V W NA+ L EM ++ + T+ L ACS LA + +G
Sbjct: 317 LSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQG 376
Query: 352 KQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMH 411
K++H + IRCG D+ I +L+DMY +CGS++ +R + + DLVS N M++ Y MH
Sbjct: 377 KEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMH 436
Query: 412 GHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKH 470
G G + + F++ G +P+HI+F + LSAC H+G I+ G ++F +M Y + P+++
Sbjct: 437 GFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQ 496
Query: 471 YTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELE 530
Y CMVDLLSRAG+ E EFI+K+P P++ +WG+LLG C H N + + AA L ELE
Sbjct: 497 YACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELE 556
Query: 531 PNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSH 590
P ++GNYV++AN+++ AGRW D A+ R MK+R + K PGCSWIE + ++H F D SH
Sbjct: 557 PQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVGDTSH 616
Query: 591 DRSEEI 596
E+I
Sbjct: 617 PLMEQI 622
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 118/497 (23%), Positives = 219/497 (44%), Gaps = 93/497 (18%)
Query: 98 SSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSI 157
+S+L C +L L LG + H + NG F+ + L++VY
Sbjct: 14 ASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVY------------------ 55
Query: 158 KNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSM 217
C+ G V +AR +FD+M +R + SW +++ Y Y+E +
Sbjct: 56 -------------CQTGCVEDARRMFDKMS----ERNVFSWTAIMEMYCGLGDYEETIKL 98
Query: 218 FRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYC 277
F L++ +G+ P F F V AC+++ + R GK+++ +++G + ++ V G++++M+
Sbjct: 99 FY-LMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFI 157
Query: 278 RYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGI 337
+ + A+ F+EIE + + + G+ A+ +F +M+ + P+ T+
Sbjct: 158 KCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALNVFRKMVLEGVKPNSITIAS 217
Query: 338 ILSACSSLATMERGKQVHAYAIRC-GYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTP 396
+SAC++L+ + G+++H Y I+ DSD+ +G +LVD YAKC S++ AR + I
Sbjct: 218 AVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQT 277
Query: 397 DLVSQNAML--TAYAMHGHGKEGIAHFRRILA---------------------------- 426
DLVS NAML T + +G GK + F+R+
Sbjct: 278 DLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIACSVFSELSTRDVVVWNSIISACAQSGR 337
Query: 427 -------------SGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTC 473
S + ++ +SAL AC +++ G E + +
Sbjct: 338 SVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNS 397
Query: 474 MVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAAD-----RLIE 528
++D+ R G + ++ +P D V W ++ HG FG A + R +
Sbjct: 398 LIDMYGRCGSIQKSRRIFDLMPQR-DLVSWNVMISVYGMHG---FGMDAVNLFQQFRTMG 453
Query: 529 LEPNNTGNYVMLANLFA 545
L+P N++ NL +
Sbjct: 454 LKP----NHITFTNLLS 466
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/423 (25%), Positives = 183/423 (43%), Gaps = 50/423 (11%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
M+ KCG +D A++ F+ + +D WN +V+ + G +AL +M
Sbjct: 155 MFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALNVFRKMV---------- 204
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY- 119
EG++PN+ T++S + AC L L G+E HGY
Sbjct: 205 --------------------------LEGVKPNSITIASAVSACTNLSLLRHGREIHGYC 238
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTI--IVGYCENGNVA 177
I S+ V N LVD Y +C + A + F + VS N + + G+ + G+
Sbjct: 239 IKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGK 298
Query: 178 EARELFDQMEHLGVQ-------RGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPT 230
A E F +M H+ R ++ WNS+IS + A + R++ + + +E
Sbjct: 299 AALEFFQRM-HIACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSN-VEVN 356
Query: 231 SFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFD 290
+ T S L AC+ + +LR+GKEIH I GL + F+ +L++MY R + ++ FD
Sbjct: 357 TVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFD 416
Query: 291 EIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMER 350
+ + + + + + + +A+ LF + ++ L P+ T +LSACS +E
Sbjct: 417 LMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEE 476
Query: 351 G-KQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHA-RLAYKRISTPDLVSQNAMLTAY 408
G K D V +VD+ ++ G K P+ ++L A
Sbjct: 477 GWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGAC 536
Query: 409 AMH 411
+H
Sbjct: 537 RIH 539
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 154/340 (45%), Gaps = 39/340 (11%)
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
+ S+L C + +LR G ++HA + G+ F+G L+E+YC+ + A+ FD++
Sbjct: 13 YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS 72
Query: 294 NIENLLGKMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIIL 339
E NV++W A+ +LF M++ + PD + +
Sbjct: 73 --------------ERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVF 118
Query: 340 SACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLV 399
ACS L GK V+ Y + G++ + + +++DM+ KCG + AR ++ I D+
Sbjct: 119 KACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVF 178
Query: 400 SQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFD-L 458
N M++ Y G K+ + FR+++ G +P+ I+ SA+SAC + ++ G E
Sbjct: 179 MWNIMVSGYTSKGEFKKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYC 238
Query: 459 MAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLG--GCVSHGN- 515
+ ++ L +VD ++ + A I D V W A+L G +G+
Sbjct: 239 IKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQT-DLVSWNAMLAVTGFTQYGDG 297
Query: 516 ---LEFGQ---IAADRLIELEPNNTGNYVMLANLFAYAGR 549
LEF Q IA EL + + + + A +GR
Sbjct: 298 KAALEFFQRMHIACSVFSELSTRDVVVWNSIISACAQSGR 337
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 95/197 (48%), Gaps = 8/197 (4%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYG+CGS+ ++++F +MP+RD VSWN +++ +G ++A+ ++ ++ PN +
Sbjct: 401 MYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTM-GLKPNHI 459
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
+++ ++ + +G EE M+ E ++P + ++ +R + + EF
Sbjct: 460 TFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEF--- 516
Query: 120 ITRNGFMSNPFVVNGLVDVYR-RCGDMLSALKIFSKFSIKNEVSCNTIIVG--YCENGNV 176
I + F N V L+ R C L+ F ++ + S N +++ Y G
Sbjct: 517 IEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRW 576
Query: 177 AEARELFDQMEHLGVQR 193
+A ++ M+ GV +
Sbjct: 577 EDAAKIRCLMKERGVTK 593
>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g57430, chloroplastic-like [Cucumis sativus]
Length = 863
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 189/548 (34%), Positives = 306/548 (55%), Gaps = 41/548 (7%)
Query: 57 PNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEF 116
P++VSW+AVI G + ++ A+ +L +M + + P+ TLSS L ACA + + LG++
Sbjct: 252 PDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQL 311
Query: 117 HGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNV 176
H + + + FV GL+D+Y +CG +
Sbjct: 312 HSALMKMDMEPDSFVGVGLIDMYSKCGLL------------------------------- 340
Query: 177 AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYD-EAFSMFRDLLMRDGIEPTSFTFG 235
+AR +FD M + +I WNS+ISGY N YD EA S+F ++ ++G+E T
Sbjct: 341 QDARMVFDLMP----XKDVIVWNSIISGY-SNCGYDIEAMSLFTNM-YKEGLEFNQTTLS 394
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
++L + A + +++H ++I G Q D +V +L++ Y + L A F E+
Sbjct: 395 TILKSTAGSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVF-EVCPA 453
Query: 296 ENLLGKMKE-DGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV 354
E+L+ + A++++ M D+ PD + + +AC++L+ E+GKQ+
Sbjct: 454 EDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQI 513
Query: 355 HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHG 414
H + ++CG SDV G +LV+MYAKCGS+ A + IS +VS +AM+ A HGHG
Sbjct: 514 HVHVLKCGLLSDVFAGNSLVNMYAKCGSIDDASCIFNEISWRGIVSWSAMIGGLAQHGHG 573
Query: 415 KEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTC 473
++ + F ++L +G P+HI+ +S LSAC HAG + FF LM + + P+ +HY C
Sbjct: 574 RKALQLFYQMLKNGILPNHITLVSVLSACNHAGLVTEARRFFGLMEKLFGITPTQEHYAC 633
Query: 474 MVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNN 533
MVD+L R G L EA +K++P + +WGALLG H N+E G+ AA+ L+ LEP
Sbjct: 634 MVDILGRVGRLDEAMVLVKEMPFQASAAVWGALLGAARIHKNIELGRHAAEMLLTLEPEK 693
Query: 534 TGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRS 593
+G +++LAN++A G W ++A+ R+ MK+ + K PG SWIE +D+++ F DRSH RS
Sbjct: 694 SGTHILLANIYASTGMWDNVAKVRRSMKNSLVKKEPGMSWIELKDKVYTFIVGDRSHPRS 753
Query: 594 EEIYTIID 601
+EIY +D
Sbjct: 754 KEIYVKLD 761
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 139/523 (26%), Positives = 247/523 (47%), Gaps = 49/523 (9%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KC A+K+ E D VSW+++++ NG EAL M L + N
Sbjct: 91 LYSKCQCFRVARKLVIDSSEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKG-NEF 149
Query: 61 SWSAVIGG--FTQN---GYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKE 115
++S+V+ G T+N G + ++ M + G+ PN +LS+VL ACA L+ + G +
Sbjct: 150 TFSSVLKGCSLTRNLELGKQIHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGMK 209
Query: 116 FHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGN 175
HGY+ + G+ S+PF N L+D+Y + G +A+ +F + + VS
Sbjct: 210 VHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIPKPDIVS------------- 256
Query: 176 VAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDG---IEPTSF 232
WN++I+G V + D A LL + G + P+ F
Sbjct: 257 ----------------------WNAVIAGCVLHEKNDLALK----LLGKMGSYRVAPSMF 290
Query: 233 TFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI 292
T S L ACA + ++ G+++H+ + + ++ D+FVG L++MY + L A+M FD +
Sbjct: 291 TLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDLM 350
Query: 293 ENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGK 352
+ ++ G+ Y AM LF+ M L + T+ IL + + +
Sbjct: 351 PXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFCE 410
Query: 353 QVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHG 412
QVH +I+ GY D ++ +L+D Y KC L+ A ++ DLV+ +M+TAY+ +G
Sbjct: 411 QVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQYG 470
Query: 413 HGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYT 472
G+E + + R+ +PD F S +AC + + + G + + + +
Sbjct: 471 LGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFAGN 530
Query: 473 CMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
+V++ ++ G + +A +I V W A++GG HG+
Sbjct: 531 SLVNMYAKCGSIDDASCIFNEISWR-GIVSWSAMIGGLAQHGH 572
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 108/438 (24%), Positives = 197/438 (44%), Gaps = 68/438 (15%)
Query: 136 VDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGI 195
V++Y +C A K+ S + VS + +I GY +NG EA + +M LG +
Sbjct: 89 VNLYSKCQCFRVARKLVIDSSEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNE 148
Query: 196 ISWNSMISGYVDNSLYDEAFSMFRDLLMRD----GIEPTSFTFGSVLIACADMNSLRKGK 251
+++S++ G + + R L+ + GI P F+ +VL ACA + G
Sbjct: 149 FTFSSVLKGCSLTRNLELGKQIHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGM 208
Query: 252 EIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNV 311
++H I LG SD F AL++MY + AA F EI +P++
Sbjct: 209 KVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIP--------------KPDI 254
Query: 312 YTWN--------------AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAY 357
+WN A++L +M S + P ++T+ L AC+++ ++ G+Q+H+
Sbjct: 255 VSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSA 314
Query: 358 AIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEG 417
++ + D +G L+DMY+KCG L+ AR+ + + D++ N++++ Y+ G+ E
Sbjct: 315 LMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYSNCGYDIEA 374
Query: 418 IAHFRRILASGFRPDHISFLSALSAC-----------VHAGSIKTGSEF----------- 455
++ F + G + + + L + VH SIK+G ++
Sbjct: 375 MSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGYVANSLLDS 434
Query: 456 -------FDLMAYYDVKPS--LKHYTCMVDLLSRAGELGEA----YEFIKKIPMAPDSVM 502
D ++V P+ L YT M+ S+ G LGE Y ++ + PD+ +
Sbjct: 435 YGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQYG-LGEEALKMYLRMQDRDIKPDAFI 493
Query: 503 WGALLGGCVSHGNLEFGQ 520
+ +L C + E G+
Sbjct: 494 FSSLFNACANLSAYEQGK 511
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 65/159 (40%), Gaps = 37/159 (23%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGS+DDA +F + R VSW
Sbjct: 535 MYAKCGSIDDASCIFNEISWRGIVSW---------------------------------- 560
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SA+IGG Q+G+ +A+ + ++M G+ PN TL SVL AC ++ + F G +
Sbjct: 561 --SAMIGGLAQHGHGRKALQLFYQMLKNGILPNHITLVSVLSACNHAGLVTEARRFFGLM 618
Query: 121 TR-NGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIK 158
+ G +VD+ R G + A+ + + +
Sbjct: 619 EKLFGITPTQEHYACMVDILGRVGRLDEAMVLVKEMPFQ 657
>gi|297802056|ref|XP_002868912.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
lyrata]
gi|297314748|gb|EFH45171.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
lyrata]
Length = 1057
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 190/583 (32%), Positives = 319/583 (54%), Gaps = 40/583 (6%)
Query: 20 ERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAI 79
E+D N ++ + G V A + + M + N++SW+ ++ G+ QN +EA+
Sbjct: 281 EKDASLMNVLIDSYVKCGRVRAAHKLFDGMPN-----KNIISWTTLLSGYKQNSLHKEAM 335
Query: 80 GMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVY 139
+ M GL+P+ SS+L +CA L L G + H Y + ++ +V N L+D+Y
Sbjct: 336 ELFTSMPKFGLKPDMFACSSILTSCASLHALEFGTQVHAYTIKANLGNDSYVTNSLIDMY 395
Query: 140 RRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWN 199
+C + A K+F F+ + V N +I GY LG Q W
Sbjct: 396 AKCDCLTEARKVFDIFAADDVVLFNAMIEGY----------------SRLGTQ-----WE 434
Query: 200 SMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIA 259
L+D A ++F D+ R I P+ TF S+L A A + SL K+IH L
Sbjct: 435 ----------LHD-ALNIFHDMRFRL-IRPSLLTFVSLLRASASLTSLGLSKQIHGLMFK 482
Query: 260 LGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQL 319
GL D F G AL+ +Y L +++ FDE++ + ++ G+ A+ L
Sbjct: 483 FGLNLDIFAGSALIAVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFSGYVQQSENEEALNL 542
Query: 320 FSEM-LSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYA 378
F E+ LS D PD +T +++A +LA+++ G++ H ++ G + + +I AL+DMYA
Sbjct: 543 FLELQLSRD-RPDEFTFVDMVTAAGNLASLQLGQEFHCQLLKRGLECNPYITNALLDMYA 601
Query: 379 KCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLS 438
KCGS + A A+ ++ D+V N+++++YA HG G++ + +++ G P++I+F+
Sbjct: 602 KCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGRKALQMLEKMMCEGIEPNYITFVG 661
Query: 439 ALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAP 498
LSAC HAG ++ G + F+LM + ++P +HY CMV LL RAG L EA E I+K+P P
Sbjct: 662 VLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNEARELIEKMPTKP 721
Query: 499 DSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQ 558
+++W +LL GC GN+E + AA+ I +P ++G++ +L+N++A G W+D + R+
Sbjct: 722 AAIVWRSLLSGCAKAGNVELAEYAAEMAILSDPKDSGSFTLLSNIYASKGMWTDAKKVRE 781
Query: 559 KMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
+MK + K PG SWIE E+H F + D+SH ++ +IY ++D
Sbjct: 782 RMKFEGVVKEPGRSWIEINKEVHIFLSKDKSHCKANQIYEVLD 824
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 130/528 (24%), Positives = 222/528 (42%), Gaps = 89/528 (16%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y + G + A+KVF+ MPER NLV
Sbjct: 88 LYSRAGGMVYARKVFEKMPER------------------------------------NLV 111
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRM-QAEGLEPNARTLSSVLPACARLQKLS--LGKEFH 117
+WS ++ +G+ EE++ + + PN LSS + AC+ L + +
Sbjct: 112 TWSTMVSACNHHGFYEESLVVFLDFWRTRKNSPNEYILSSFIQACSGLDGSGRWMVFQLQ 171
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
++ ++ F + +V L+D Y + GN+
Sbjct: 172 SFLVKSRFDRDVYVGTLLIDFYLK-------------------------------EGNID 200
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
AR +FD + ++ ++W +MISG V + +F L M + P + +V
Sbjct: 201 YARLVFDALP----EKSTVTWTTMISGCVKMGRSYVSLQLFYQL-MEGNVVPDGYILSTV 255
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
L AC+ + L GK+IHA + G + D + L++ Y + + AA FD + N
Sbjct: 256 LSACSILPFLEGGKQIHAHILRYGHEKDASLMNVLIDSYVKCGRVRAAHKLFDGMPNKNI 315
Query: 298 LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAY 357
+ G++ N AM+LF+ M L PD++ IL++C+SL +E G QVHAY
Sbjct: 316 ISWTTLLSGYKQNSLHKEAMELFTSMPKFGLKPDMFACSSILTSCASLHALEFGTQVHAY 375
Query: 358 AIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHG----- 412
I+ +D ++ +L+DMYAKC L AR + + D+V NAM+ Y+ G
Sbjct: 376 TIKANLGNDSYVTNSLIDMYAKCDCLTEARKVFDIFAADDVVLFNAMIEGYSRLGTQWEL 435
Query: 413 HGKEGIAH---FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLK 469
H I H FR I RP ++F+S L A S+ + LM + + +
Sbjct: 436 HDALNIFHDMRFRLI-----RPSLLTFVSLLRASASLTSLGLSKQIHGLMFKFGLNLDIF 490
Query: 470 HYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
+ ++ + S L ++ ++ + D V+W ++ G V E
Sbjct: 491 AGSALIAVYSNCYCLKDSRLVFDEMKV-KDLVIWNSMFSGYVQQSENE 537
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 175/352 (49%), Gaps = 15/352 (4%)
Query: 164 NTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLM 223
N ++ Y G + AR++F++M +R +++W++M+S + Y+E+ +F D
Sbjct: 83 NILMNLYSRAGGMVYARKVFEKMP----ERNLVTWSTMVSACNHHGFYEESLVVFLDFWR 138
Query: 224 RDGIEPTSFTFGSVLIACADMNSLRKGK--EIHALAIALGLQSDTFVGGALVEMYCRYQD 281
P + S + AC+ ++ + ++ + + D +VG L++ Y + +
Sbjct: 139 TRKNSPNEYILSSFIQACSGLDGSGRWMVFQLQSFLVKSRFDRDVYVGTLLIDFYLKEGN 198
Query: 282 LVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSA 341
+ A++ FD + + G ++ ++QLF +++ ++ PD Y + +LSA
Sbjct: 199 IDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEGNVVPDGYILSTVLSA 258
Query: 342 CSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQ 401
CS L +E GKQ+HA+ +R G++ D + L+D Y KCG ++ A + + +++S
Sbjct: 259 CSILPFLEGGKQIHAHILRYGHEKDASLMNVLIDSYVKCGRVRAAHKLFDGMPNKNIISW 318
Query: 402 NAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY 461
+L+ Y + KE + F + G +PD + S L++C +++ G++ +
Sbjct: 319 TTLLSGYKQNSLHKEAMELFTSMPKFGLKPDMFACSSILTSCASLHALEFGTQ----VHA 374
Query: 462 YDVKPSLKH----YTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
Y +K +L + ++D+ ++ L EA + + I A D V++ A++ G
Sbjct: 375 YTIKANLGNDSYVTNSLIDMYAKCDCLTEARK-VFDIFAADDVVLFNAMIEG 425
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 116/274 (42%), Gaps = 32/274 (11%)
Query: 253 IHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVY 312
+H I GL+ DT++ L+ +Y R +V A+ F+++ E N+
Sbjct: 66 VHGQIIVSGLELDTYLSNILMNLYSRAGGMVYARKVFEKMP--------------ERNLV 111
Query: 313 TWNAMQ-------LFSEMLSLDL--------TPDIYTVGIILSACSSLATMERGK--QVH 355
TW+ M + E L + L +P+ Y + + ACS L R Q+
Sbjct: 112 TWSTMVSACNHHGFYEESLVVFLDFWRTRKNSPNEYILSSFIQACSGLDGSGRWMVFQLQ 171
Query: 356 AYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGK 415
++ ++ +D DV++GT L+D Y K G++ +ARL + + V+ M++ G
Sbjct: 172 SFLVKSRFDRDVYVGTLLIDFYLKEGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSY 231
Query: 416 EGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMV 475
+ F +++ PD + LSAC ++ G + + Y + ++
Sbjct: 232 VSLQLFYQLMEGNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGHEKDASLMNVLI 291
Query: 476 DLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
D + G + A++ +P + + W LL G
Sbjct: 292 DSYVKCGRVRAAHKLFDGMP-NKNIISWTTLLSG 324
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 58/116 (50%), Gaps = 1/116 (0%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGS +DA K F RD V WNSV+++ A +G +AL+ LE+M E PN +
Sbjct: 599 MYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGRKALQMLEKMMCEGIE-PNYI 657
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEF 116
++ V+ + G E+ + M G+EP ++ R +L+ +E
Sbjct: 658 TFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNEAREL 713
>gi|147766033|emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
Length = 724
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 182/513 (35%), Positives = 283/513 (55%), Gaps = 37/513 (7%)
Query: 85 MQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVV-NGLVDVYRRCG 143
+Q L P+ S +L C RL K+ G+ H ++ + F+ N V+ N +V++Y +CG
Sbjct: 78 IQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCG 137
Query: 144 DMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMIS 203
C + +AR +FD+M + +++W ++I+
Sbjct: 138 ---------------------------C----LDDARRMFDEMP----TKDMVTWTALIA 162
Query: 204 GYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQ 263
G+ N+ +A +F +L R G++P FT S+L A + L G ++HA + G Q
Sbjct: 163 GFSQNNRPRDALLLFPQML-RLGLQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQ 221
Query: 264 SDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEM 323
S +VG ALV+MY R + AAQ+AFD + + G +A+ L +M
Sbjct: 222 SSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKM 281
Query: 324 LSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSL 383
+ P +T + SAC+S+ +E+GK VHA+ I+ G IG L+DMYAK GS+
Sbjct: 282 QRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSI 341
Query: 384 KHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSAC 443
A+ + R+ PD+VS N MLT A HG GKE + F ++L G P+ ISFL L+AC
Sbjct: 342 DDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTAC 401
Query: 444 VHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMW 503
H+G + G +F+LM Y V+P + HY VDLL R G L A FI+++P+ P + +W
Sbjct: 402 SHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVW 461
Query: 504 GALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDR 563
GALLG C H N+E G AA+R EL+P+++G ++L+N++A AGRW D+A+ R+ MK+
Sbjct: 462 GALLGACRMHKNMELGVYAAERAFELDPHDSGPRMLLSNIYASAGRWRDVAKVRKMMKES 521
Query: 564 RMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEI 596
+ K P CSW+E + +H F A+D +H + +EI
Sbjct: 522 GVKKQPACSWVEIENAVHLFVANDETHPQIKEI 554
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 115/433 (26%), Positives = 179/433 (41%), Gaps = 101/433 (23%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG LDDA+++F MP +D +V
Sbjct: 132 MYAKCGCLDDARRMFDEMPTKD------------------------------------MV 155
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+A+I GF+QN +A+ + +M GL+PN TLSS+L A L G + H +
Sbjct: 156 TWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSEHGLDPGTQLHAFC 215
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G+ S+ +V + LVD+Y RCG M +A F K+EVS N +I G+ G A
Sbjct: 216 LKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHAL 275
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
L +M+ R +PT FT+ SV A
Sbjct: 276 HLLWKMQ------------------------------------RKNFQPTHFTYSSVFSA 299
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA + +L +GK +HA I GL+ F+G L++MY + + A+ FD +
Sbjct: 300 CASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRL-------- 351
Query: 301 KMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSSLA 346
+P+V +WN M F +ML + + P+ + +L+ACS
Sbjct: 352 ------VKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSG 405
Query: 347 TMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHA-RLAYKRISTPDLVSQNAML 405
++ G + + DV VD+ + G L A R + P A+L
Sbjct: 406 LLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALL 465
Query: 406 TAYAMHGHGKEGI 418
A MH + + G+
Sbjct: 466 GACRMHKNMELGV 478
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 161/319 (50%), Gaps = 10/319 (3%)
Query: 220 DLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHA-LAIALGLQSDTFVGGALVEMYCR 278
DL+ R + P + +L C + + +G+ +HA L + L + + +V MY +
Sbjct: 76 DLIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAK 135
Query: 279 YQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGII 338
L A+ FDE+ + + GF N +A+ LF +ML L L P+ +T+ +
Sbjct: 136 CGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSL 195
Query: 339 LSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDL 398
L A S ++ G Q+HA+ ++ GY S V++G+ALVDMYA+CG + A+LA+ + T
Sbjct: 196 LKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSE 255
Query: 399 VSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDL 458
VS NA+++ +A G G+ + ++ F+P H ++ S SAC G+++ G
Sbjct: 256 VSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAH 315
Query: 459 MAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEF 518
M +K ++D+ ++AG + +A ++ + PD V W +L GC HG
Sbjct: 316 MIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRL-VKPDVVSWNTMLTGCAQHG---L 371
Query: 519 GQIAADRL-----IELEPN 532
G+ DR I +EPN
Sbjct: 372 GKETLDRFEQMLRIGIEPN 390
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 150/356 (42%), Gaps = 83/356 (23%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +CG +D A+ F MP T + V
Sbjct: 233 MYARCGHMDAAQLAFDGMP------------------------------------TKSEV 256
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A+I G + G E A+ +L++MQ + +P T SSV ACA + L GK H ++
Sbjct: 257 SWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHM 316
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
++G F+ N L+D+Y + G + A ++F + + VS NT++ G ++G E
Sbjct: 317 IKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETL 376
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEA------------------FSMFRDLL 222
+ F+QM +G++ IS+ +++ + L DE + F DLL
Sbjct: 377 DRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLL 436
Query: 223 MRDG-------------IEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVG 269
R G IEPT+ +G++L AC + K E+ A + D
Sbjct: 437 GRVGLLDRAERFIREMPIEPTAAVWGALLGAC----RMHKNMELGVYAAERAFELDPHDS 492
Query: 270 GALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPN-VYTW----NAMQLF 320
G + + ++ A+ + ++ + + MKE G + +W NA+ LF
Sbjct: 493 GPRMLL----SNIYASAGRWRDVAKVRKM---MKESGVKKQPACSWVEIENAVHLF 541
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 120/266 (45%), Gaps = 23/266 (8%)
Query: 253 IHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVY 312
IHA A +D+ V +C +QD ++LL K + DG +Y
Sbjct: 29 IHAPAXPFSDSNDSEVEDGDAXSFCVFQD--------------KDLLRKSQSDG-GTGLY 73
Query: 313 TWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGY-DSDVHIGT 371
+ +Q S L PD +L C+ L +E+G+ VHA+ + + D+ + +
Sbjct: 74 ALDLIQRGS------LVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQN 127
Query: 372 ALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRP 431
+V+MYAKCG L AR + + T D+V+ A++ ++ + ++ + F ++L G +P
Sbjct: 128 IIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQP 187
Query: 432 DHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFI 491
+H + S L A + G++ Y + S+ + +VD+ +R G + A
Sbjct: 188 NHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAF 247
Query: 492 KKIPMAPDSVMWGALLGGCVSHGNLE 517
+P + V W AL+ G G E
Sbjct: 248 DGMPTKSE-VSWNALISGHARKGEGE 272
>gi|224092370|ref|XP_002309579.1| predicted protein [Populus trichocarpa]
gi|222855555|gb|EEE93102.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 188/621 (30%), Positives = 318/621 (51%), Gaps = 75/621 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KCG L + ++F+ M RD ++
Sbjct: 177 LYSKCGKLKEVCQLFEKMTHRD------------------------------------VI 200
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ +I + G EA+ + M G+ P+ T+ S++ CA+L+ L +GK H YI
Sbjct: 201 SWNTMISCYVLKGMYREALDLFDEMLVSGVLPDEITMVSLVSTCAKLKDLEMGKRLHLYI 260
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKF--SIKNEVSCNTIIVGYCENGNVAE 178
N ++N LVD+Y +CG M A + S+ S + V T++ GY ++ + +
Sbjct: 261 VDNKLWIRGSLLNCLVDMYSKCGKMDEAHGLLSRCDESEVDVVLWTTLVSGYVKSNKIDK 320
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
AR+LFD+M +R ++SW +M+SGYV Y E+ +F+ + + I P +VL
Sbjct: 321 ARQLFDKMN----ERSLVSWTTMMSGYVQGGYYCESLELFQQMRFENVI-PDEVALVTVL 375
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
AC + G+ +HA + G+ D F+G AL+++Y + L A F+++
Sbjct: 376 SACVHLEDFDLGRSVHAFIVTYGMLVDGFLGNALLDLYAKCGKLDEALRTFEQLPCKSAA 435
Query: 299 LGKMKEDGF-----------------EPNVYTWNAM--------------QLFSEMLSLD 327
DGF E ++ +WN M ++F +M S +
Sbjct: 436 SWNSMLDGFCRSGGVDKARDFFNKIPEKDIVSWNTMVNAYVKHDLFNESFEIFCKMQSSN 495
Query: 328 LTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHAR 387
+ PD T+ +LS+C+ + + G V+ Y + D +GTAL+DMY KCG ++ A
Sbjct: 496 VKPDKTTLISLLSSCAKVGALNHGIWVNVYIEKNEIGIDAMLGTALIDMYGKCGCVEMAY 555
Query: 388 LAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAG 447
+ +I ++ AM+ AYAM G E I + + G +PDH++F++ L+AC H G
Sbjct: 556 EIFTQIIEKNVFVWTAMMAAYAMEGQALEAIDLYLEMEERGVKPDHVTFIALLAACSHGG 615
Query: 448 SIKTGSEFFD-LMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGAL 506
+ G ++F+ L ++Y++ P++ HY CMVDLL R G L E +FI+++P+ PD +W +L
Sbjct: 616 LVDEGYKYFNKLRSFYNIIPTIHHYGCMVDLLGRVGHLEETVKFIERMPIEPDVSIWSSL 675
Query: 507 LGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMH 566
+ C SH N+E + A +LIE++P N G +V+L+N++A AGRW D+++ R K+ + +
Sbjct: 676 MRACRSHHNVELAEQAFKQLIEIDPTNNGAHVLLSNIYADAGRWDDVSKVRTKLHETGVP 735
Query: 567 KSPGCSWIEDRDEIHKFRASD 587
K PG + IE +H+F AS+
Sbjct: 736 KQPGFTMIEQNGVVHEFVASN 756
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 130/558 (23%), Positives = 226/558 (40%), Gaps = 107/558 (19%)
Query: 38 LVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTL 97
L + L+C ++ S +E P + W+ ++ + G +E + + M +G+ + T
Sbjct: 78 LSVNNLDCAHQILSYSHE-PESIIWNTLLENKLKEGCPQEVLECYYHMVTQGVLLDISTF 136
Query: 98 SSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSI 157
++ AC + + LG E HG I + GF N + N L+ +Y +CG + ++F K +
Sbjct: 137 HFLIHACCKNFDVKLGSEVHGRILKCGFGRNKSLNNNLMGLYSKCGKLKEVCQLFEKMTH 196
Query: 158 KNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSM 217
++ +S NT+I Y G EA +LFD+M
Sbjct: 197 RDVISWNTMISCYVLKGMYREALDLFDEM------------------------------- 225
Query: 218 FRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYC 277
+ G+ P T S++ CA + L GK +H + L + LV+MY
Sbjct: 226 -----LVSGVLPDEITMVSLVSTCAKLKDLEMGKRLHLYIVDNKLWIRGSLLNCLVDMYS 280
Query: 278 R-----------------------YQDLVAAQMAFDEIENIENLLGKMKE---------- 304
+ + LV+ + ++I+ L KM E
Sbjct: 281 KCGKMDEAHGLLSRCDESEVDVVLWTTLVSGYVKSNKIDKARQLFDKMNERSLVSWTTMM 340
Query: 305 DGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYD 364
G+ Y +++LF +M ++ PD + +LSAC L + G+ VHA+ + G
Sbjct: 341 SGYVQGGYYCESLELFQQMRFENVIPDEVALVTVLSACVHLEDFDLGRSVHAFIVTYGML 400
Query: 365 SDVHIGTALVDMYAKCGSLKH-------------------------------ARLAYKRI 393
D +G AL+D+YAKCG L AR + +I
Sbjct: 401 VDGFLGNALLDLYAKCGKLDEALRTFEQLPCKSAASWNSMLDGFCRSGGVDKARDFFNKI 460
Query: 394 STPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGS 453
D+VS N M+ AY H E F ++ +S +PD + +S LS+C G++ G
Sbjct: 461 PEKDIVSWNTMVNAYVKHDLFNESFEIFCKMQSSNVKPDKTTLISLLSSCAKVGALNHGI 520
Query: 454 EFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSH 513
+ ++ T ++D+ + G + AYE +I + + +W A++
Sbjct: 521 WVNVYIEKNEIGIDAMLGTALIDMYGKCGCVEMAYEIFTQI-IEKNVFVWTAMMAAYAME 579
Query: 514 GN-LEFGQIAADRLIELE 530
G LE A D +E+E
Sbjct: 580 GQALE----AIDLYLEME 593
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 133/290 (45%), Gaps = 11/290 (3%)
Query: 245 NSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFD---EIENI--ENLL 299
+++R+ IHA I L D + ++ +L A E E+I LL
Sbjct: 46 SNIREFSPIHAHLITANLIHDPEITSQVLAFLLSVNNLDCAHQILSYSHEPESIIWNTLL 105
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
++G V ++ + M++ + DI T ++ AC ++ G +VH +
Sbjct: 106 ENKLKEGCPQEV-----LECYYHMVTQGVLLDISTFHFLIHACCKNFDVKLGSEVHGRIL 160
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
+CG+ + + L+ +Y+KCG LK +++++ D++S N M++ Y + G +E +
Sbjct: 161 KCGFGRNKSLNNNLMGLYSKCGKLKEVCQLFEKMTHRDVISWNTMISCYVLKGMYREALD 220
Query: 420 HFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLS 479
F +L SG PD I+ +S +S C ++ G + + C+VD+ S
Sbjct: 221 LFDEMLVSGVLPDEITMVSLVSTCAKLKDLEMGKRLHLYIVDNKLWIRGSLLNCLVDMYS 280
Query: 480 RAGELGEAYEFIKKIPMAP-DSVMWGALLGGCVSHGNLEFGQIAADRLIE 528
+ G++ EA+ + + + D V+W L+ G V ++ + D++ E
Sbjct: 281 KCGKMDEAHGLLSRCDESEVDVVLWTTLVSGYVKSNKIDKARQLFDKMNE 330
>gi|357520433|ref|XP_003630505.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524527|gb|AET04981.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 998
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 180/544 (33%), Positives = 292/544 (53%), Gaps = 36/544 (6%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
N+VSW+ VI G QN + +A+ + M G P+A +SVL +C L L G++ H
Sbjct: 307 NVVSWTTVIAGCMQNSFHRDALDLFVEMARMGWNPDAFGCTSVLNSCGSLVALEKGRQVH 366
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
Y + ++ FV NGL+D+Y +C + A K+F N+
Sbjct: 367 AYAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVF----------------------NLM 404
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
A +L +S+N+MI GY EA +FR++ + PT F S+
Sbjct: 405 AAIDL-------------VSYNAMIEGYSRQDKLCEALDLFREMRLSLS-SPTLLIFVSL 450
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
L A + L +IH L I G+ D F G AL+++Y + + A++ F+EI++ +
Sbjct: 451 LGVSASLYHLELSNQIHGLIIKYGVSLDEFAGSALIDVYSKCSRVGDARLVFEEIQDKDI 510
Query: 298 LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAY 357
++ G+ +++L+ + L P+ +T +++A S++A++ G+Q H
Sbjct: 511 VVWTAMFSGYTQQSENEESLKLYKCLQMSRLKPNEFTFAAVITAASNIASLRHGQQFHNQ 570
Query: 358 AIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEG 417
I+ G+D D + LVDMYAK GS++ A A+ + D N+M+ YA HG ++
Sbjct: 571 VIKMGFDDDPFVANTLVDMYAKSGSIEEAHKAFISTNWKDTACWNSMIATYAQHGEAEKA 630
Query: 418 IAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDL 477
+ F ++ G +P++++F+ LSAC H G + G + FD M+ + ++P ++HY CMV L
Sbjct: 631 LQVFEDMIMEGLKPNYVTFVGVLSACSHTGLLDLGFDHFDSMSQFGIEPGIEHYVCMVSL 690
Query: 478 LSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNY 537
L RAG+L EA EFI+K+P+ +V+W +LL C GN+E G AA+ I P ++G+Y
Sbjct: 691 LGRAGKLYEAKEFIEKMPIKQAAVVWRSLLSACRVSGNVELGTYAAEMAISCNPADSGSY 750
Query: 538 VMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
V+L+N+FA G W ++ R R+KM + K PGCSWIE +EIHKF A D +H S I
Sbjct: 751 VLLSNIFASKGMWVNVRRLREKMDISGVVKEPGCSWIEVNNEIHKFIAKDTAHRDSAPIS 810
Query: 598 TIID 601
++D
Sbjct: 811 LVLD 814
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 150/587 (25%), Positives = 272/587 (46%), Gaps = 86/587 (14%)
Query: 20 ERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAI 79
+ D N+++ A + LV A + + MS NLV+WS+++ +T + + EA+
Sbjct: 71 KHDIFLVNTLLHAYSKLNLVNHANKLFDTMSH-----KNLVTWSSMVSMYTHHSHCLEAL 125
Query: 80 GMLFR--MQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVD 137
MLF M++ +PN L+SV+ AC + L+ + HG + + G++ + +V L+D
Sbjct: 126 -MLFVQFMRSCNEKPNEYILASVVRACTQFGGLNPALQIHGLVVKGGYVQDVYVCTSLID 184
Query: 138 VYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQME---------- 187
Y + + A +F +K + TII GY + G + +LFDQM+
Sbjct: 185 FYTKHACIDDARLLFDGLQVKTSFTWTTIIAGYSKQGRSQVSLKLFDQMKEGHVCPDKYV 244
Query: 188 --------------------HLGVQR-GIISWNSMISGYVD------------------- 207
H V R GI+ SM++G++D
Sbjct: 245 LSSVLSACLMLKFLEGGKQIHCYVLRSGIVMDVSMVNGFIDFYFKCHKVQLGRKLFDRMV 304
Query: 208 ----------------NSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGK 251
NS + +A +F + + R G P +F SVL +C + +L KG+
Sbjct: 305 DKNVVSWTTVIAGCMQNSFHRDALDLFVE-MARMGWNPDAFGCTSVLNSCGSLVALEKGR 363
Query: 252 EIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNV 311
++HA AI + + +D FV L++MY + L A+ F+ + I+ + +G+
Sbjct: 364 QVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVFNLMAAIDLVSYNAMIEGYSRQD 423
Query: 312 YTWNAMQLFSEM-LSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIG 370
A+ LF EM LSL +P + +L +SL +E Q+H I+ G D G
Sbjct: 424 KLCEALDLFREMRLSLS-SPTLLIFVSLLGVSASLYHLELSNQIHGLIIKYGVSLDEFAG 482
Query: 371 TALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFR 430
+AL+D+Y+KC + ARL ++ I D+V AM + Y +E + ++ + S +
Sbjct: 483 SALIDVYSKCSRVGDARLVFEEIQDKDIVVWTAMFSGYTQQSENEESLKLYKCLQMSRLK 542
Query: 431 PDHISFLSALSACVHAGSIKTGSEFFDLMAY--YDVKPSLKHYTCMVDLLSRAGELGEAY 488
P+ +F + ++A + S++ G +F + + +D P + + +VD+ +++G + EA+
Sbjct: 543 PNEFTFAAVITAASNIASLRHGQQFHNQVIKMGFDDDPFVAN--TLVDMYAKSGSIEEAH 600
Query: 489 E-FIKKIPMAPDSVMWGALLGGCVSHGNLEFG-QIAADRLIE-LEPN 532
+ FI D+ W +++ HG E Q+ D ++E L+PN
Sbjct: 601 KAFIST--NWKDTACWNSMIATYAQHGEAEKALQVFEDMIMEGLKPN 645
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 102/416 (24%), Positives = 183/416 (43%), Gaps = 47/416 (11%)
Query: 142 CGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSM 201
C + S + +F F + NT++ Y + V A +LFD M H + +++W+SM
Sbjct: 57 CKKIHSKIVVFG-FHKHDIFLVNTLLHAYSKLNLVNHANKLFDTMSH----KNLVTWSSM 111
Query: 202 ISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALG 261
+S Y +S EA +F + +P + SV+ AC L +IH L + G
Sbjct: 112 VSMYTHHSHCLEALMLFVQFMRSCNEKPNEYILASVVRACTQFGGLNPALQIHGLVVKGG 171
Query: 262 LQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFS 321
D +V +L++ Y ++ + A++ FD ++ + G+ + +++LF
Sbjct: 172 YVQDVYVCTSLIDFYTKHACIDDARLLFDGLQVKTSFTWTTIIAGYSKQGRSQVSLKLFD 231
Query: 322 EMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCG 381
+M + PD Y + +LSAC L +E GKQ+H Y +R G DV + +D Y KC
Sbjct: 232 QMKEGHVCPDKYVLSSVLSACLMLKFLEGGKQIHCYVLRSGIVMDVSMVNGFIDFYFKCH 291
Query: 382 SLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALS 441
++ R + R+ ++VS ++ + ++ + F + G+ PD S L+
Sbjct: 292 KVQLGRKLFDRMVDKNVVSWTTVIAGCMQNSFHRDALDLFVEMARMGWNPDAFGCTSVLN 351
Query: 442 AC-----------VHAGSIKT------------------------GSEFFDLMAYYDVKP 466
+C VHA +IK + F+LMA D
Sbjct: 352 SCGSLVALEKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVFNLMAAID--- 408
Query: 467 SLKHYTCMVDLLSRAGELGEAYEFIKKIPM---APDSVMWGALLGGCVSHGNLEFG 519
L Y M++ SR +L EA + +++ + +P +++ +LLG S +LE
Sbjct: 409 -LVSYNAMIEGYSRQDKLCEALDLFREMRLSLSSPTLLIFVSLLGVSASLYHLELS 463
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 101/421 (23%), Positives = 167/421 (39%), Gaps = 84/421 (19%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC SL DA+KVF +M D VS+N
Sbjct: 387 MYAKCDSLTDARKVFNLMAAIDLVSYN--------------------------------- 413
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
A+I G+++ EA+ + M+ P S+L A L L L + HG I
Sbjct: 414 ---AMIEGYSRQDKLCEALDLFREMRLSLSSPTLLIFVSLLGVSASLYHLELSNQIHGLI 470
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G + F + L+DVY +C V +AR
Sbjct: 471 IKYGVSLDEFAGSALIDVYSKC-------------------------------SRVGDAR 499
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+F++++ + I+ W +M SGY S +E+ +++ L M ++P FTF +V+ A
Sbjct: 500 LVFEEIQ----DKDIVVWTAMFSGYTQQSENEESLKLYKCLQM-SRLKPNEFTFAAVITA 554
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
+++ SLR G++ H I +G D FV LV+MY + + A AF +
Sbjct: 555 ASNIASLRHGQQFHNQVIKMGFDDDPFVANTLVDMYAKSGSIEEAHKAFISTNWKDTACW 614
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
+ + A+Q+F +M+ L P+ T +LSACS ++ G +
Sbjct: 615 NSMIATYAQHGEAEKALQVFEDMIMEGLKPNYVTFVGVLSACSHTGLLDLGFDHFDSMSQ 674
Query: 361 CGYDSDVHIGTALVDMYAKCGSL------------KHARLAYKRISTPDLVSQNAMLTAY 408
G + + +V + + G L K A + ++ + + VS N L Y
Sbjct: 675 FGIEPGIEHYVCMVSLLGRAGKLYEAKEFIEKMPIKQAAVVWRSLLSACRVSGNVELGTY 734
Query: 409 A 409
A
Sbjct: 735 A 735
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/281 (19%), Positives = 118/281 (41%), Gaps = 6/281 (2%)
Query: 251 KEIHALAIALGL-QSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEP 309
K+IH+ + G + D F+ L+ Y + + A FD + + + +
Sbjct: 58 KKIHSKIVVFGFHKHDIFLVNTLLHAYSKLNLVNHANKLFDTMSHKNLVTWSSMVSMYTH 117
Query: 310 NVYTWNAMQLFSE-MLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVH 368
+ + A+ LF + M S + P+ Y + ++ AC+ + Q+H ++ GY DV+
Sbjct: 118 HSHCLEALMLFVQFMRSCNEKPNEYILASVVRACTQFGGLNPALQIHGLVVKGGYVQDVY 177
Query: 369 IGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASG 428
+ T+L+D Y K + ARL + + + ++ Y+ G + + F ++
Sbjct: 178 VCTSLIDFYTKHACIDDARLLFDGLQVKTSFTWTTIIAGYSKQGRSQVSLKLFDQMKEGH 237
Query: 429 FRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAY 488
PD S LSAC+ ++ G + + + + +D + ++
Sbjct: 238 VCPDKYVLSSVLSACLMLKFLEGGKQIHCYVLRSGIVMDVSMVNGFIDFYFKCHKVQLGR 297
Query: 489 EFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIEL 529
+ ++ + + V W ++ GC+ + F + A D +E+
Sbjct: 298 KLFDRM-VDKNVVSWTTVIAGCMQNS---FHRDALDLFVEM 334
>gi|357116509|ref|XP_003560023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Brachypodium distachyon]
Length = 804
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 203/623 (32%), Positives = 333/623 (53%), Gaps = 55/623 (8%)
Query: 24 VSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLF 83
V+ S+V+A A G + ++ + + +T V +A+I F + A+ +
Sbjct: 90 VAATSLVSAYAVAGRLRDSAAFFDSVPVARRDT---VLHNAMISAFARASLAAPAVSVFR 146
Query: 84 RMQA--EGLEPNARTLSSVLPACARLQKLSLG--KEFHGYITRNGFMSNPFVVNGLVDVY 139
+ A + L P+ + +S+L A ++ L++ + H + + G + V N L+ +Y
Sbjct: 147 SLLASDDSLRPDDYSFTSLLSAVGQMHDLAVSHCTQLHCAVHKLGAGAVLSVSNALIALY 206
Query: 140 RRC---GDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGII 196
+C G A K+ + K+E++ TI+VG+ G+V AR F++++ +
Sbjct: 207 MKCDAPGVTRDARKVLDEMPEKDELTWTTIVVGHVRKGDVHAARSAFEEID----GEFDV 262
Query: 197 SWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHAL 256
WN+MISGYV + + EAF +FR ++ + I P FTF S+L ACA+ GK +H
Sbjct: 263 VWNAMISGYVQSGMCAEAFELFRRMVSKR-IPPDEFTFTSLLSACANAGFFLHGKSVHGQ 321
Query: 257 AIALGLQSDTF------VGGALVEMYCRYQDLVAAQMAFD-----EIENIENLLGKMKED 305
I L Q D V ALV +Y + + A FD ++ + +L E
Sbjct: 322 FIRL--QPDFVPEAALPVNNALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSGYIES 379
Query: 306 G--------FEPNVY----TW--------------NAMQLFSEMLSLDLTPDIYTVGIIL 339
G F+ Y +W +A++LF++M S D+ P YT +
Sbjct: 380 GCLDNAARIFKEMPYKSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAV 439
Query: 340 SACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLV 399
+AC L ++ GKQ+HA+ ++CG+++ G AL+ MYA+CG++K ARL + + D V
Sbjct: 440 AACGELGALKHGKQLHAHLVQCGFEASNSAGNALLTMYARCGAVKDARLVFLVMPNVDSV 499
Query: 400 SQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM 459
S NAM++A HGHG+E + F +++A G PD ISFL+ L+AC HAG + G ++F+ M
Sbjct: 500 SWNAMISALGQHGHGREALELFDQMVAQGIYPDRISFLTILTACNHAGLVDDGFQYFESM 559
Query: 460 AY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEF 518
+ + P HY ++DLL RAG +GEA + IK +P P +W A+L GC +G++E
Sbjct: 560 ERDFGISPGEDHYARLIDLLGRAGRIGEARDLIKTMPFEPTPAIWEAILSGCRINGDMEL 619
Query: 519 GQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRD 578
G AAD+L ++ P + G Y++L+N ++ AGRW D AR R+ M+DR + K PGCSWIE +
Sbjct: 620 GAYAADQLFKMVPEHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGN 679
Query: 579 EIHKFRASDRSHDRSEEIYTIID 601
++H F D H + E+Y ++
Sbjct: 680 KVHVFLVGDTKHPDAHEVYRFLE 702
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 117/399 (29%), Positives = 197/399 (49%), Gaps = 26/399 (6%)
Query: 1 MYGKC---GSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETP 57
+Y KC G DA+KV MPE+D ++W ++V G V A E +D E
Sbjct: 205 LYMKCDAPGVTRDARKVLDEMPEKDELTWTTIVVGHVRKGDVHAARSAFEE---IDGEFD 261
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
V W+A+I G+ Q+G EA + RM ++ + P+ T +S+L ACA GK H
Sbjct: 262 --VVWNAMISGYVQSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVH 319
Query: 118 GYITR--NGFMSNPF--VVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCEN 173
G R F+ V N LV +Y + G + A KIF ++K+ VS NTI+ GY E+
Sbjct: 320 GQFIRLQPDFVPEAALPVNNALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSGYIES 379
Query: 174 GNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFT 233
G + A +F +M + + +SW M+SGYV L ++A +F + D ++P +T
Sbjct: 380 GCLDNAARIFKEMPY----KSELSWMVMVSGYVHGGLAEDALKLFNQMRSED-VKPCDYT 434
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
+ + AC ++ +L+ GK++HA + G ++ G AL+ MY R + A++ F +
Sbjct: 435 YAGAVAACGELGALKHGKQLHAHLVQCGFEASNSAGNALLTMYARCGAVKDARLVFLVMP 494
Query: 294 NIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ 353
N++++ + + A++LF +M++ + PD + IL+AC+ ++ G Q
Sbjct: 495 NVDSVSWNAMISALGQHGHGREALELFDQMVAQGIYPDRISFLTILTACNHAGLVDDGFQ 554
Query: 354 V-----HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHAR 387
+ I G D L+D+ + G + AR
Sbjct: 555 YFESMERDFGISPGEDHYAR----LIDLLGRAGRIGEAR 589
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 102/232 (43%), Gaps = 13/232 (5%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +CG++ DA+ VF +MP D VSWN++++A +G EALE ++M + P+ +
Sbjct: 476 MYARCGAVKDARLVFLVMPNVDSVSWNAMISALGQHGHGREALELFDQMVA-QGIYPDRI 534
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
S+ ++ G ++ M+ + G+ P + ++ R ++ ++
Sbjct: 535 SFLTILTACNHAGLVDDGFQYFESMERDFGISPGEDHYARLIDLLGRAGRIGEARDL--- 591
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDM-LSALKIFSKFSIKNEVSCNTIIVG--YCENGNV 176
I F P + ++ R GDM L A F + E I++ Y G
Sbjct: 592 IKTMPFEPTPAIWEAILSGCRINGDMELGAYAADQLFKMVPEHDGTYILLSNTYSAAGRW 651
Query: 177 AEARELFDQMEHLGVQRGI-ISW----NSMISGYVDNSLYDEAFSMFRDLLM 223
+A + M GV++ SW N + V ++ + +A ++R L M
Sbjct: 652 VDAARVRKLMRDRGVKKEPGCSWIEVGNKVHVFLVGDTKHPDAHEVYRFLEM 703
>gi|356558692|ref|XP_003547637.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g17630-like [Glycine max]
Length = 696
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 187/586 (31%), Positives = 310/586 (52%), Gaps = 43/586 (7%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
+L+ W+++I +GY + A+ + M+ G P+ TL V+ AC+ L L + H
Sbjct: 96 HLLLWNSIIRANVSHGYHQHALELYVEMRKLGFLPDGFTLPLVIRACSSLGSSYLCRIVH 155
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
+ + GF ++ VVN LV +Y + G M A ++F +++ VS NT++ GY N +
Sbjct: 156 CHALQMGFRNHLHVVNELVGMYGKLGRMEDARQLFDGMFVRSIVSWNTMVSGYALNRDSL 215
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
A +F +ME G+Q ++W S++S + LYDE +F+ + R GIE + V
Sbjct: 216 GASRVFKRMELEGLQPNSVTWTSLLSSHARCGLYDETLELFKVMRTR-GIEIGAEALAVV 274
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIEN--- 294
L CADM + GKEIH + G + FV AL+ Y ++Q + A F EI+N
Sbjct: 275 LSVCADMAEVDWGKEIHGYVVKGGYEDYLFVKNALIGTYGKHQHMGDAHKVFLEIKNKNL 334
Query: 295 --IENLLGKMKEDGF----------------------EPNVYTWNA-------------- 316
L+ E G PNV +W+A
Sbjct: 335 VSWNALISSYAESGLCDEAYAAFLHMEKSDSDDHSLVRPNVISWSAVISGFAYKGRGEKS 394
Query: 317 MQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDM 376
++LF +M + + T+ +LS C+ LA + G+++H YAIR ++ +G L++M
Sbjct: 395 LELFRQMQLAKVMANCVTISSVLSVCAELAALNLGRELHGYAIRNMMSDNILVGNGLINM 454
Query: 377 YAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISF 436
Y KCG K L + I DL+S N+++ Y MHG G+ + F ++ + +PD+I+F
Sbjct: 455 YMKCGDFKEGHLVFDNIEGRDLISWNSLIGGYGMHGLGENALRTFNEMIRARMKPDNITF 514
Query: 437 LSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIP 495
++ LSAC HAG + G FD M + ++P+++HY CMVDLL RAG L EA + ++ +P
Sbjct: 515 VAILSACSHAGLVAAGRNLFDQMVTEFRIEPNVEHYACMVDLLGRAGLLKEATDIVRNMP 574
Query: 496 MAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLAR 555
+ P+ +WGALL C + +++ + A +++ L+ TG++++L+N++A GRW D AR
Sbjct: 575 IEPNEYVWGALLNSCRMYKDMDIVEETASQILTLKSKITGSFMLLSNIYAANGRWDDSAR 634
Query: 556 TRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
R + + + K PG SWIE R +++ F A + H E+IY I++
Sbjct: 635 VRVSARTKGLKKIPGQSWIEVRKKVYTFSAGNLVHFGLEDIYVILE 680
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 122/393 (31%), Positives = 197/393 (50%), Gaps = 9/393 (2%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGK G ++DA+++F M R VSWN++V+ A N L A +RM L+ PN V
Sbjct: 176 MYGKLGRMEDARQLFDGMFVRSIVSWNTMVSGYALNRDSLGASRVFKRME-LEGLQPNSV 234
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W++++ + G +E + + M+ G+E A L+ VL CA + ++ GKE HGY+
Sbjct: 235 TWTSLLSSHARCGLYDETLELFKVMRTRGIEIGAEALAVVLSVCADMAEVDWGKEIHGYV 294
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G+ FV N L+ Y + M A K+F + KN VS N +I Y E+G EA
Sbjct: 295 VKGGYEDYLFVKNALIGTYGKHQHMGDAHKVFLEIKNKNLVSWNALISSYAESGLCDEAY 354
Query: 181 ELFDQME------HLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTF 234
F ME H V+ +ISW+++ISG+ +++ +FR + + + T
Sbjct: 355 AAFLHMEKSDSDDHSLVRPNVISWSAVISGFAYKGRGEKSLELFRQMQLAK-VMANCVTI 413
Query: 235 GSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIEN 294
SVL CA++ +L G+E+H AI + + VG L+ MY + D + FD IE
Sbjct: 414 SSVLSVCAELAALNLGRELHGYAIRNMMSDNILVGNGLINMYMKCGDFKEGHLVFDNIEG 473
Query: 295 IENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV 354
+ + G+ + NA++ F+EM+ + PD T ILSACS + G+ +
Sbjct: 474 RDLISWNSLIGGYGMHGLGENALRTFNEMIRARMKPDNITFVAILSACSHAGLVAAGRNL 533
Query: 355 HAYAI-RCGYDSDVHIGTALVDMYAKCGSLKHA 386
+ + +V +VD+ + G LK A
Sbjct: 534 FDQMVTEFRIEPNVEHYACMVDLLGRAGLLKEA 566
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 146/286 (51%), Gaps = 8/286 (2%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNE-----T 56
YGK + DA KVF + ++ VSWN+++++ A +GL EA M D++
Sbjct: 313 YGKHQHMGDAHKVFLEIKNKNLVSWNALISSYAESGLCDEAYAAFLHMEKSDSDDHSLVR 372
Query: 57 PNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEF 116
PN++SWSAVI GF G E+++ + +MQ + N T+SSVL CA L L+LG+E
Sbjct: 373 PNVISWSAVISGFAYKGRGEKSLELFRQMQLAKVMANCVTISSVLSVCAELAALNLGREL 432
Query: 117 HGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNV 176
HGY RN N V NGL+++Y +CGD +F ++ +S N++I GY +G
Sbjct: 433 HGYAIRNMMSDNILVGNGLINMYMKCGDFKEGHLVFDNIEGRDLISWNSLIGGYGMHGLG 492
Query: 177 AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGS 236
A F++M ++ I++ +++S L ++F ++ IEP +
Sbjct: 493 ENALRTFNEMIRARMKPDNITFVAILSACSHAGLVAAGRNLFDQMVTEFRIEPNVEHYAC 552
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDL 282
++ L++ +I + ++ + +V GAL+ Y+D+
Sbjct: 553 MVDLLGRAGLLKEATDI---VRNMPIEPNEYVWGALLNSCRMYKDM 595
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 87/397 (21%), Positives = 160/397 (40%), Gaps = 77/397 (19%)
Query: 104 CARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSC 163
C LQ+ ++ H + PF+ L+ VY R + A K+F +
Sbjct: 41 CFTLQQ---ARQLHSQLVLTTAHRLPFLAARLIAVYARFAFLSHARKVFDAIPL------ 91
Query: 164 NTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLM 223
+ + HL + WNS+I V + + A ++ + +
Sbjct: 92 --------------------ESLHHL------LLWNSIIRANVSHGYHQHALELYVE-MR 124
Query: 224 RDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLV 283
+ G P FT V+ AC+ + S + +H A+ +G ++ V LV MY + +
Sbjct: 125 KLGFLPDGFTLPLVIRACSSLGSSYLCRIVHCHALQMGFRNHLHVVNELVGMYGKLGRME 184
Query: 284 AAQMAFDE--IENI-------------------ENLLGKMKEDGFEPNVYTWNA------ 316
A+ FD + +I + +M+ +G +PN TW +
Sbjct: 185 DARQLFDGMFVRSIVSWNTMVSGYALNRDSLGASRVFKRMELEGLQPNSVTWTSLLSSHA 244
Query: 317 --------MQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVH 368
++LF M + + + ++LS C+ +A ++ GK++H Y ++ GY+ +
Sbjct: 245 RCGLYDETLELFKVMRTRGIEIGAEALAVVLSVCADMAEVDWGKEIHGYVVKGGYEDYLF 304
Query: 369 IGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASG 428
+ AL+ Y K + A + I +LVS NA++++YA G E A F + S
Sbjct: 305 VKNALIGTYGKHQHMGDAHKVFLEIKNKNLVSWNALISSYAESGLCDEAYAAFLHMEKSD 364
Query: 429 ------FRPDHISFLSALSACVHAGSIKTGSEFFDLM 459
RP+ IS+ + +S + G + E F M
Sbjct: 365 SDDHSLVRPNVISWSAVISGFAYKGRGEKSLELFRQM 401
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 144/315 (45%), Gaps = 31/315 (9%)
Query: 211 YDEAFSMFRDLLMRDGI--EPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFV 268
+ FS F+ + + + + ++F + C +L++ +++H+ + F+
Sbjct: 9 FRSLFSRFQPIFLISHVHNDELIYSFHAFFQRCF---TLQQARQLHSQLVLTTAHRLPFL 65
Query: 269 GGALVEMYCRYQDLVAAQMAFDEI--ENIENLLGKMKEDGFEPNV---YTWNAMQLFSEM 323
L+ +Y R+ L A+ FD I E++ +LL + NV Y +A++L+ EM
Sbjct: 66 AARLIAVYARFAFLSHARKVFDAIPLESLHHLL--LWNSIIRANVSHGYHQHALELYVEM 123
Query: 324 LSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSL 383
L PD +T+ +++ ACSSL + + VH +A++ G+ + +H+ LV MY K G +
Sbjct: 124 RKLGFLPDGFTLPLVIRACSSLGSSYLCRIVHCHALQMGFRNHLHVVNELVGMYGKLGRM 183
Query: 384 KHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSAC 443
+ AR + + +VS N M++ YA++ F+R+ G +P+ +++ S LS+
Sbjct: 184 EDARQLFDGMFVRSIVSWNTMVSGYALNRDSLGASRVFKRMELEGLQPNSVTWTSLLSSH 243
Query: 444 VHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELG-EAYEFIKKIPMAPDSVM 502
G E F +M +R E+G EA + + V
Sbjct: 244 ARCGLYDETLELFKVMR------------------TRGIEIGAEALAVVLSVCADMAEVD 285
Query: 503 WGALLGGCVSHGNLE 517
WG + G V G E
Sbjct: 286 WGKEIHGYVVKGGYE 300
>gi|225438557|ref|XP_002276001.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Vitis vinifera]
Length = 825
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 190/634 (29%), Positives = 331/634 (52%), Gaps = 71/634 (11%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALE--------CLERMSSLD 53
Y KCG + ++F M E + V VV++ + +LE LE L R + +D
Sbjct: 205 YTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMD 264
Query: 54 NET--------------------------PNLVSWSAVIGGFTQNGYDEEAIGMLFRMQA 87
N++SW+ +I G+ QN +D EA+ + M
Sbjct: 265 VSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNR 324
Query: 88 EGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLS 147
G +P+ +SVL +C + L G++ H Y + S+ FV NGL+D+Y + ++
Sbjct: 325 LGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLI- 383
Query: 148 ALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVD 207
+A+++FD M ++ +IS+N+MI GY
Sbjct: 384 ------------------------------DAKKVFDVM----AEQNVISYNAMIEGYSS 409
Query: 208 NSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTF 267
EA +F ++ +R P+ TF S+L A + +L K+IH L I G+ D F
Sbjct: 410 QEKLSEALELFHEMRVR-LFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKFGVSLDLF 468
Query: 268 VGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLD 327
G AL+++Y + + A+ F+E+ + ++ G+ ++ A++L+S +
Sbjct: 469 AGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSR 528
Query: 328 LTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHAR 387
P+ +T +++A S+LA++ G+Q H ++ G D + ALVDMYAKCGS++ AR
Sbjct: 529 QKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEAR 588
Query: 388 LAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAG 447
+ D+V N+M++ +A HG +E + FR ++ G +P++++F++ LSAC HAG
Sbjct: 589 KMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAG 648
Query: 448 SIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALL 507
++ G F+ M + +KP +HY C+V LL R+G+L EA EFI+K+P+ P +++W +LL
Sbjct: 649 RVEDGLNHFNSMPGFGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLL 708
Query: 508 GGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHK 567
C GN+E G+ AA+ I +P ++G+Y++L+N+FA G W+D+ + R +M + K
Sbjct: 709 SACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFASKGMWADVKKVRDRMDSSEVVK 768
Query: 568 SPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
PG SWIE ++++ F A D +H R +I +++D
Sbjct: 769 EPGRSWIEVNNKVNVFIARDTTH-READIGSVLD 801
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 133/496 (26%), Positives = 233/496 (46%), Gaps = 45/496 (9%)
Query: 20 ERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAI 79
+ D N ++ C+ + V A ++M NL++WS+++ ++Q GY EEA+
Sbjct: 59 QSDTFLANILINVCSKSDRVDNARVVFDKMPH-----KNLITWSSMVSMYSQQGYSEEAL 113
Query: 80 GMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDV 138
+ +Q + G PN L+SV+ AC +L + G + HG++ R+GF + +V L+D
Sbjct: 114 MVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDF 173
Query: 139 YRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISW 198
Y + G++ A +F + S K V+ TII GY + G A + ELF QM V
Sbjct: 174 YSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVV------ 227
Query: 199 NSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAI 258
P + SVL AC+ + L GK+IHA +
Sbjct: 228 ------------------------------PDRYVVSSVLSACSMLEFLEGGKQIHAYVL 257
Query: 259 ALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG-KMKEDGFEPNVYTWNAM 317
G + D V L++ Y + + A + FD++ ++N++ G+ N + W AM
Sbjct: 258 RRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMV-VKNIISWTTMISGYMQNSFDWEAM 316
Query: 318 QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMY 377
+LF EM L PD + +L++C S +E+G+QVHAY I+ +SD + L+DMY
Sbjct: 317 KLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMY 376
Query: 378 AKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFL 437
AK L A+ + ++ +++S NAM+ Y+ E + F + F P ++F+
Sbjct: 377 AKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFV 436
Query: 438 SALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMA 497
S L +++ + L+ + V L + ++D+ S+ + +A +++
Sbjct: 437 SLLGVSASLFALELSKQIHGLIIKFGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMN-E 495
Query: 498 PDSVMWGALLGGCVSH 513
D V+W A+ G H
Sbjct: 496 KDIVVWNAMFFGYTQH 511
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 122/474 (25%), Positives = 210/474 (44%), Gaps = 77/474 (16%)
Query: 85 MQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGD 144
+Q L P R +++L + K HG I +G S+ F+ N L++V
Sbjct: 18 LQIPNLRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINV------ 71
Query: 145 MLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISG 204
C+ ++ V AR +FD+M H + +I+W+SM+S
Sbjct: 72 ------------------CS-------KSDRVDNARVVFDKMPH----KNLITWSSMVSM 102
Query: 205 YVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQS 264
Y +EA +F DL + G P F SV+ AC + + KG ++H + G
Sbjct: 103 YSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQ 162
Query: 265 DTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEML 324
D +VG +L++ Y + ++ A++ FD++ + G+ + +++LF++M
Sbjct: 163 DVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMR 222
Query: 325 SLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLK 384
++ PD Y V +LSACS L +E GKQ+HAY +R G + DV + L+D Y KC +K
Sbjct: 223 ETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVK 282
Query: 385 HARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSAC- 443
R + ++ +++S M++ Y + E + F + G++PD + S L++C
Sbjct: 283 AGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCG 342
Query: 444 ----------VHAGSIKTGSE------------------------FFDLMAYYDVKPSLK 469
VHA +IK E FD+MA +V
Sbjct: 343 SREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVIS--- 399
Query: 470 HYTCMVDLLSRAGELGEAYEFIK--KIPMAPDSVM-WGALLGGCVSHGNLEFGQ 520
Y M++ S +L EA E ++ + P S++ + +LLG S LE +
Sbjct: 400 -YNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSK 452
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 101/436 (23%), Positives = 175/436 (40%), Gaps = 109/436 (25%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K L DAKKVF +M E++ +S+N+++ E E++S
Sbjct: 375 MYAKSNLLIDAKKVFDVMAEQNVISYNAMI----------EGYSSQEKLS---------- 414
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
EA+ + M+ P+ T S+L A L L L K+ HG I
Sbjct: 415 ----------------EALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLI 458
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G + F + L+DVY +C + A +F + + K+ V N + GY ++ EA
Sbjct: 459 IKFGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEAL 518
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+L+ ++ FS + P FTF +++ A
Sbjct: 519 KLYSTLQ---------------------------FSRQK---------PNEFTFAALITA 542
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
+++ SLR G++ H + +GL FV ALV+MY + + A+
Sbjct: 543 ASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEAR-------------- 588
Query: 301 KMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSSLA 346
KM +V WN+M +F EM+ + P+ T +LSACS
Sbjct: 589 KMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAG 648
Query: 347 TMERG----KQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST-PDLVSQ 401
+E G + + I+ G + H +V + + G L A+ +++ P +
Sbjct: 649 RVEDGLNHFNSMPGFGIKPGTE---HYA-CVVSLLGRSGKLFEAKEFIEKMPIEPAAIVW 704
Query: 402 NAMLTAYAMHGHGKEG 417
++L+A + G+ + G
Sbjct: 705 RSLLSACRIAGNVELG 720
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 128/290 (44%), Gaps = 67/290 (23%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KC + DA+ VF+ M E+D V WN
Sbjct: 476 VYSKCSYVKDARHVFEEMNEKDIVVWN--------------------------------- 502
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
A+ G+TQ+ +EEA+ + +Q +PN T ++++ A + L L G++FH +
Sbjct: 503 ---AMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQL 559
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G PFV N LVD+Y +CG + A K+F+ ++ V N++I + ++G EA
Sbjct: 560 VKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEAL 619
Query: 181 ELFDQMEHLGVQRGIISWNSMIS-----GYVDNSLY-------------DEAFSMFRDLL 222
+F +M G+Q +++ +++S G V++ L E ++ LL
Sbjct: 620 GMFREMMKEGIQPNYVTFVAVLSACSHAGRVEDGLNHFNSMPGFGIKPGTEHYACVVSLL 679
Query: 223 MRDG-------------IEPTSFTFGSVLIACADMNSLRKGKEIHALAIA 259
R G IEP + + S+L AC ++ GK +AI+
Sbjct: 680 GRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRIAGNVELGKYAAEMAIS 729
>gi|297742828|emb|CBI35582.3| unnamed protein product [Vitis vinifera]
Length = 638
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 203/591 (34%), Positives = 293/591 (49%), Gaps = 80/591 (13%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
YG CG L DA +VF MPE+D LVS
Sbjct: 86 YGNCGGLRDAGRVFDEMPEKD------------------------------------LVS 109
Query: 62 WSAVIGGFTQNGYD-EEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
W+ +IG F+ NG+ +A+ M M EGL+PN+ T+SS LP L+ G+E HG
Sbjct: 110 WNTMIGVFSVNGWHYRDALDMFRLMIDEGLKPNSITISSFLPVLVELEFFKAGREVHGSS 169
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R G S+ F+ N L+D+Y + G A +F K KN VS N +I + +N A
Sbjct: 170 IRMGLESDIFIANSLIDMYAKSGHSTEASNVFYKLDAKNVVSWNAMIANFAQNRFELVAV 229
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
L QM+ G P S TF +VL A
Sbjct: 230 GLVRQMQDYGEL------------------------------------PNSVTFTNVLPA 253
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE---N 297
CA M +R GKEIHA +I +G D FV AL +MY + L A+ FD E N
Sbjct: 254 CARMGLVRPGKEIHARSIHMGCAFDLFVSNALTDMYAKSGHLKLARNVFDTSLRDEVSYN 313
Query: 298 LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAY 357
+L G ++ LFSEM + L D + LSAC++L +++GK++H +
Sbjct: 314 ILIV----GHSQTSDCSESLSLFSEMQLMGLKQDNVSFMGALSACANLTAIKQGKEIHGF 369
Query: 358 AIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEG 417
+R + + + +L+D Y KCG + AR + R++ D+ S N M+ Y M G
Sbjct: 370 LLRKLFHIHLFVANSLLDFYTKCGRIGLARNIFDRMTNKDVASWNTMILGYGMLGELDTA 429
Query: 418 IAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDL 477
I F + D +SF++ LSAC H G ++ G ++FD + ++P+ HY CMVDL
Sbjct: 430 IDLFENMRKDDVEYDSVSFIAVLSACSHGGLLEKGRKYFDELKARGIEPTQMHYACMVDL 489
Query: 478 LSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNY 537
L RAG + EA E IK +P+ PD+ +WGALLG C +GNLE AA+ L EL+P ++G Y
Sbjct: 490 LGRAGLMEEAAELIKGLPIVPDANIWGALLGACRIYGNLELAAWAAEHLFELKPEHSGYY 549
Query: 538 VMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDR 588
+L+N++A GRW + R R+ MK R + KSPGCSW++ ++ H F ++
Sbjct: 550 TLLSNMYAETGRWDEANRIRELMKSRGVKKSPGCSWVQIGEQAHAFVVGEK 600
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 140/292 (47%), Gaps = 11/292 (3%)
Query: 198 WNSMISGY----VDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEI 253
WN++I GY V L E ++ ++R G+ P TF VL ACAD +RKG+E+
Sbjct: 10 WNTLIRGYSIAGVGGGL--EVYNQ----MVRIGVRPDDHTFPFVLKACADAFEVRKGREV 63
Query: 254 HALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYT 313
H + LG +SD FVG L+ Y L A FDE+ + + F N +
Sbjct: 64 HGSVVKLGFESDVFVGNTLLSFYGNCGGLRDAGRVFDEMPEKDLVSWNTMIGVFSVNGWH 123
Query: 314 W-NAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTA 372
+ +A+ +F M+ L P+ T+ L L + G++VH +IR G +SD+ I +
Sbjct: 124 YRDALDMFRLMIDEGLKPNSITISSFLPVLVELEFFKAGREVHGSSIRMGLESDIFIANS 183
Query: 373 LVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPD 432
L+DMYAK G A + ++ ++VS NAM+ +A + + R++ G P+
Sbjct: 184 LIDMYAKSGHSTEASNVFYKLDAKNVVSWNAMIANFAQNRFELVAVGLVRQMQDYGELPN 243
Query: 433 HISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGEL 484
++F + L AC G ++ G E + L + D+ +++G L
Sbjct: 244 SVTFTNVLPACARMGLVRPGKEIHARSIHMGCAFDLFVSNALTDMYAKSGHL 295
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 112/483 (23%), Positives = 190/483 (39%), Gaps = 105/483 (21%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G +A VF + ++ VSWN+++ A N L A+ + +M
Sbjct: 187 MYAKSGHSTEASNVFYKLDAKNVVSWNAMIANFAQNRFELVAVGLVRQM----------- 235
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
Q G PN+ T ++VLPACAR+ + GKE H
Sbjct: 236 -------------------------QDYGELPNSVTFTNVLPACARMGLVRPGKEIHARS 270
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
G + FV N L D+Y + G + A +F S+++EVS N +IVG+ + + +E+
Sbjct: 271 IHMGCAFDLFVSNALTDMYAKSGHLKLARNVFDT-SLRDEVSYNILIVGHSQTSDCSESL 329
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LF +M+ +G+++ +S F L A
Sbjct: 330 SLFSEMQLMGLKQDNVS------------------------------------FMGALSA 353
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA++ ++++GKEIH + FV +L++ Y + + A+ FD + N
Sbjct: 354 CANLTAIKQGKEIHGFLLRKLFHIHLFVANSLLDFYTKCGRIGLARNIFDRMTN------ 407
Query: 301 KMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSSLA 346
+V +WN M LF M D+ D + +LSACS
Sbjct: 408 --------KDVASWNTMILGYGMLGELDTAIDLFENMRKDDVEYDSVSFIAVLSACSHGG 459
Query: 347 TMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNAML 405
+E+G++ G + +VD+ + G ++ A K + PD A+L
Sbjct: 460 LLEKGRKYFDELKARGIEPTQMHYACMVDLLGRAGLMEEAAELIKGLPIVPDANIWGALL 519
Query: 406 TAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSAC-VHAGSIKTGSEFFDLMAYYDV 464
A ++G+ + + +P+H + + LS G + +LM V
Sbjct: 520 GACRIYGNLELAAWAAEHLFE--LKPEHSGYYTLLSNMYAETGRWDEANRIRELMKSRGV 577
Query: 465 KPS 467
K S
Sbjct: 578 KKS 580
>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
Length = 723
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 181/581 (31%), Positives = 323/581 (55%), Gaps = 40/581 (6%)
Query: 23 CVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGML 82
CV + NG + A + +RM N+V+W+ +I F Q G+ +A+ +
Sbjct: 79 CVGCALIDMFVKGNGDLESAYKVFDRMPD-----RNVVTWTLMITRFQQLGFSRDAVDLF 133
Query: 83 FRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRC 142
M G P+ TLS V+ ACA + LSLG++FH + ++G + V LVD+Y +C
Sbjct: 134 LDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVGCSLVDMYAKC 193
Query: 143 GDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMI 202
+G+V +AR++FD+M ++SW ++I
Sbjct: 194 ----------------------------VADGSVDDARKVFDRMP----VHNVMSWTAII 221
Query: 203 SGYVDNSLYD-EAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALG 261
+GYV + D EA +F +++ + ++P FTF SVL ACA+++ + G++++AL + +
Sbjct: 222 TGYVQSGGCDREAIELFLEMV-QGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMR 280
Query: 262 LQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFS 321
L S VG +L+ MY R ++ A+ AFD + + + + ++ + A +LF+
Sbjct: 281 LASINCVGNSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFN 340
Query: 322 EMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCG 381
E+ + +T +LS SS+ + +G+Q+H+ ++ G+ S++HI AL+ MY++CG
Sbjct: 341 EIEGAGTGVNAFTFASLLSGASSIGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCG 400
Query: 382 SLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALS 441
+++ A + + +++S +M+T +A HG + F ++L +G P+ +++++ LS
Sbjct: 401 NIEAAFQVFNEMGDGNVISWTSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLS 460
Query: 442 ACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDS 500
AC H G I G + F M + + P ++HY C+VDLL R+G L EA E + +P D+
Sbjct: 461 ACSHVGLISEGLKHFKSMKVEHGIVPRMEHYACVVDLLGRSGHLEEAMELVNSMPFKADA 520
Query: 501 VMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKM 560
++ LG C HGN++ G+ AA+ ++E +P++ Y++L+NL A AG+W ++A R+KM
Sbjct: 521 LVLRTFLGACRVHGNMDLGKHAAEMILEQDPHDPAAYILLSNLHASAGQWEEVAEIRKKM 580
Query: 561 KDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
K+R + K GCSWIE +++HKF D SH +++EIY +D
Sbjct: 581 KERNLTKEAGCSWIEVENKVHKFYVGDTSHPQAQEIYDELD 621
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 130/523 (24%), Positives = 237/523 (45%), Gaps = 68/523 (13%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
+LVSWSA+I + N EAI F M G PN + V AC+ + +SLGK
Sbjct: 6 DLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKIIF 65
Query: 118 GYITRNGFMSNPFVVN-GLVDVYRRC-GDMLSALKIFSKFSIKNEVSCNTIIVGYCENGN 175
G++ + G+ + V L+D++ + GD+ SA K+F + +N
Sbjct: 66 GFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRN---------------- 109
Query: 176 VAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFG 235
+++W MI+ + +A +F D+++ G P FT
Sbjct: 110 -------------------VVTWTLMITRFQQLGFSRDAVDLFLDMVL-SGYVPDRFTLS 149
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
V+ ACA+M L G++ H L + GL D VG +LV+MY A +A +++
Sbjct: 150 GVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVGCSLVDMY-------AKCVADGSVDDA 202
Query: 296 ENLLGKMKEDGFEPNVYTWN---------------AMQLFSEMLSLDLTPDIYTVGIILS 340
+ +M NV +W A++LF EM+ + P+ +T +L
Sbjct: 203 RKVFDRMPVH----NVMSWTAIITGYVQSGGCDREAIELFLEMVQGQVKPNHFTFSSVLK 258
Query: 341 ACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVS 400
AC++L+ + G+QV+A ++ S +G +L+ MY++CG++++AR A+ + +LVS
Sbjct: 259 ACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNMENARKAFDVLFEKNLVS 318
Query: 401 QNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA 460
N ++ AYA + +E F I +G + +F S LS G+I G + +
Sbjct: 319 YNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGASSIGAIGKGEQIHSRIL 378
Query: 461 YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQ 520
K +L ++ + SR G + A++ ++ + + W +++ G HG
Sbjct: 379 KSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDG-NVISWTSMITGFAKHGFATRAL 437
Query: 521 IAADRLIE--LEPNNTGNYVMLANLFAYAGRWSDLARTRQKMK 561
+++E + PN Y+ + + ++ G S+ + + MK
Sbjct: 438 ETFHKMLEAGVSPNEV-TYIAVLSACSHVGLISEGLKHFKSMK 479
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/309 (30%), Positives = 160/309 (51%), Gaps = 15/309 (4%)
Query: 189 LGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLR 248
+G +R ++SW+++IS Y +N EA S F D+L G P + F V AC++ ++
Sbjct: 1 MGNKRDLVSWSALISCYANNEKAFEAISAFFDML-ECGFYPNEYCFTGVFRACSNKENIS 59
Query: 249 KGKEIHALAIALG-LQSDTFVGGALVEMYCRYQ-DLVAAQMAFDEIENIENLLGKMKEDG 306
GK I + G +SD VG AL++M+ + DL +A FD + + + +
Sbjct: 60 LGKIIFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITR 119
Query: 307 FEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSD 366
F+ ++ +A+ LF +M+ PD +T+ ++SAC+ + + G+Q H ++ G D D
Sbjct: 120 FQQLGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLD 179
Query: 367 VHIGTALVDMYAKC---GSLKHARLAYKRISTPDLVSQNAMLTAYAMHGH-GKEGIAHFR 422
V +G +LVDMYAKC GS+ AR + R+ +++S A++T Y G +E I F
Sbjct: 180 VCVGCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFL 239
Query: 423 RILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTC----MVDLL 478
++ +P+H +F S L AC + I G + + L+ VK L C ++ +
Sbjct: 240 EMVQGQVKPNHFTFSSVLKACANLSDIWLGEQVYALV----VKMRLASINCVGNSLISMY 295
Query: 479 SRAGELGEA 487
SR G + A
Sbjct: 296 SRCGNMENA 304
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 113/418 (27%), Positives = 182/418 (43%), Gaps = 76/418 (18%)
Query: 1 MYGKC---GSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETP 57
MY KC GS+DDA+KVF MP + +SW +++T +G
Sbjct: 189 MYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSG-------------------- 228
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
G D EAI + M ++PN T SSVL ACA L + LG++ +
Sbjct: 229 ---------------GCDREAIELFLEMVQGQVKPNHFTFSSVLKACANLSDIWLGEQVY 273
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
+ + S V N L+ +Y RCG+M +A K F KN VS NTI+ Y ++ N
Sbjct: 274 ALVVKMRLASINCVGNSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLNSE 333
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
EA ELF+++E G G+ +FTF S+
Sbjct: 334 EAFELFNEIE--GAGTGV----------------------------------NAFTFASL 357
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
L + + ++ KG++IH+ + G +S+ + AL+ MY R ++ AA F+E+ +
Sbjct: 358 LSGASSIGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGNV 417
Query: 298 LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG-KQVHA 356
+ GF + + A++ F +ML ++P+ T +LSACS + + G K +
Sbjct: 418 ISWTSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLISEGLKHFKS 477
Query: 357 YAIRCGYDSDVHIGTALVDMYAKCGSLKHA-RLAYKRISTPDLVSQNAMLTAYAMHGH 413
+ G + +VD+ + G L+ A L D + L A +HG+
Sbjct: 478 MKVEHGIVPRMEHYACVVDLLGRSGHLEEAMELVNSMPFKADALVLRTFLGACRVHGN 535
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 66/146 (45%), Gaps = 5/146 (3%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +CG+++ A +VF M + + +SW S++T A +G ALE +M +PN V
Sbjct: 395 MYSRCGNIEAAFQVFNEMGDGNVISWTSMITGFAKHGFATRALETFHKMLEA-GVSPNEV 453
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
++ AV+ + G E + M+ E G+ P + V+ R L E
Sbjct: 454 TYIAVLSACSHVGLISEGLKHFKSMKVEHGIVPRMEHYACVVDLLGRSGHLEEAMEL--- 510
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDM 145
+ F ++ V+ + R G+M
Sbjct: 511 VNSMPFKADALVLRTFLGACRVHGNM 536
>gi|255572939|ref|XP_002527400.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533210|gb|EEF34966.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 621
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 178/559 (31%), Positives = 299/559 (53%), Gaps = 42/559 (7%)
Query: 84 RMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCG 143
RM+ G + T V+ ACA + LGK HG++ GF S+ V N L+ +Y + G
Sbjct: 32 RMRKIGTLGDGFTFPLVIRACAYMGSFILGKTIHGHVLEMGFQSHLHVGNELIGMYAKLG 91
Query: 144 DMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMIS 203
M A +F + S+++ +S NT++ Y N + A E+F +ME G++ +++W S+IS
Sbjct: 92 RMRDARHLFDRMSVRSYISWNTMVSAYAFNYDCNGALEIFQRMESEGMEPNLVTWTSLIS 151
Query: 204 GYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQ 263
Y + ++EA +F L+ G+E + V+ CAD+ + + K IH A+ G +
Sbjct: 152 SYARSGWHEEAMELF-GLMRMKGVEVSGEALAVVISICADLGAFVRAKIIHEYAVKGGFE 210
Query: 264 SDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE---------------------NLLGKM 302
+FV AL+ +Y ++ D+ A F E++N + ++
Sbjct: 211 EYSFVKSALICVYGKHGDVNGAWNLFLEMKNKSLASWNALITSHAEAGLCDEALEIFSQL 270
Query: 303 KEDG----FEPNVYTWN--------------AMQLFSEMLSLDLTPDIYTVGIILSACSS 344
+ G PNV +W+ A++LF M + + T+ +LS C+
Sbjct: 271 ERSGDCPRLRPNVVSWSAIIDGFASKGREKEALELFRRMQHAKILANAVTISTVLSLCAE 330
Query: 345 LATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAM 404
LA + G+++H + +R +++ +G LV+MYAKCG LK + +++ DL+S N+M
Sbjct: 331 LAALHLGREIHGHVVRAVMVNNILVGNGLVNMYAKCGCLKEGHMIFEKTERKDLISWNSM 390
Query: 405 LTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFD-LMAYYD 463
+T Y MHG G + F +++ GF+PD ++F++ LS+C H+G + G FD ++ Y
Sbjct: 391 ITGYGMHGLGMNALETFDQMIKLGFKPDGVTFVAVLSSCSHSGLVHEGRRLFDQMLKKYR 450
Query: 464 VKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAA 523
++P ++HY CMVDLL RAG L EA E +K +P+AP++ +WGALL C H N E + A
Sbjct: 451 IEPQMEHYACMVDLLGRAGLLREASEIVKNMPVAPNACVWGALLNSCRMHNNTEIAEETA 510
Query: 524 DRLIEL-EPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHK 582
L L TG Y++L+N++A +GRW D AR R K + + K+PG SWI+ ++
Sbjct: 511 SHLFNLSHRETTGTYMLLSNIYAASGRWEDSARVRTSAKTKGLKKNPGQSWIKVEKNVYT 570
Query: 583 FRASDRSHDRSEEIYTIID 601
F A + E+I+ I++
Sbjct: 571 FSAGNNMQRGFEQIFEILE 589
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 122/417 (29%), Positives = 207/417 (49%), Gaps = 8/417 (1%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G + DA+ +F M R +SWN++V+A A N ALE +RM S E PNLV
Sbjct: 86 MYAKLGRMRDARHLFDRMSVRSYISWNTMVSAYAFNYDCNGALEIFQRMESEGME-PNLV 144
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+++I + ++G+ EEA+ + M+ +G+E + L+ V+ CA L K H Y
Sbjct: 145 TWTSLISSYARSGWHEEAMELFGLMRMKGVEVSGEALAVVISICADLGAFVRAKIIHEYA 204
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ GF FV + L+ VY + GD+ A +F + K+ S N +I + E G EA
Sbjct: 205 VKGGFEEYSFVKSALICVYGKHGDVNGAWNLFLEMKNKSLASWNALITSHAEAGLCDEAL 264
Query: 181 ELFDQMEHLG----VQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGS 236
E+F Q+E G ++ ++SW+++I G+ EA +FR + I + T +
Sbjct: 265 EIFSQLERSGDCPRLRPNVVSWSAIIDGFASKGREKEALELFRR-MQHAKILANAVTIST 323
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
VL CA++ +L G+EIH + + ++ VG LV MY + L M F++ E +
Sbjct: 324 VLSLCAELAALHLGREIHGHVVRAVMVNNILVGNGLVNMYAKCGCLKEGHMIFEKTERKD 383
Query: 297 NLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHA 356
+ G+ + NA++ F +M+ L PD T +LS+CS + G+++
Sbjct: 384 LISWNSMITGYGMHGLGMNALETFDQMIKLGFKPDGVTFVAVLSSCSHSGLVHEGRRLFD 443
Query: 357 YAI-RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST-PDLVSQNAMLTAYAMH 411
+ + + + +VD+ + G L+ A K + P+ A+L + MH
Sbjct: 444 QMLKKYRIEPQMEHYACMVDLLGRAGLLREASEIVKNMPVAPNACVWGALLNSCRMH 500
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 152/372 (40%), Gaps = 53/372 (14%)
Query: 214 AFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALV 273
A S+ + + G FTF V+ ACA M S GK IH + +G QS VG L+
Sbjct: 25 AISVMPRRMRKIGTLGDGFTFPLVIRACAYMGSFILGKTIHGHVLEMGFQSHLHVGNELI 84
Query: 274 EMYCRYQDLVAAQMAFDEI---------------------ENIENLLGKMKEDGFEPNVY 312
MY + + A+ FD + + +M+ +G EPN+
Sbjct: 85 GMYAKLGRMRDARHLFDRMSVRSYISWNTMVSAYAFNYDCNGALEIFQRMESEGMEPNLV 144
Query: 313 TWN--------------AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYA 358
TW AM+LF M + + +++S C+ L R K +H YA
Sbjct: 145 TWTSLISSYARSGWHEEAMELFGLMRMKGVEVSGEALAVVISICADLGAFVRAKIIHEYA 204
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGI 418
++ G++ + +AL+ +Y K G + A + + L S NA++T++A G E +
Sbjct: 205 VKGGFEEYSFVKSALICVYGKHGDVNGAWNLFLEMKNKSLASWNALITSHAEAGLCDEAL 264
Query: 419 AHFRRILASG----FRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCM 474
F ++ SG RP+ +S+ + + G K E F M + + L + +
Sbjct: 265 EIFSQLERSGDCPRLRPNVVSWSAIIDGFASKGREKEALELFRRMQHAKI---LANAVTI 321
Query: 475 VDLLSRAGELG------EAYEFIKKIPMAPDSVMWGALLG-----GCVSHGNLEFGQIAA 523
+LS EL E + + + M + ++ L+ GC+ G++ F +
Sbjct: 322 STVLSLCAELAALHLGREIHGHVVRAVMVNNILVGNGLVNMYAKCGCLKEGHMIFEKTER 381
Query: 524 DRLIELEPNNTG 535
LI TG
Sbjct: 382 KDLISWNSMITG 393
>gi|449445027|ref|XP_004140275.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 833
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 199/574 (34%), Positives = 313/574 (54%), Gaps = 53/574 (9%)
Query: 24 VSWNSVVTACAANGLVLEALEC--LERMSSLDNET--PNLVSWSAVIGGFTQNGYDEEAI 79
V +S VT C N LV +C ++ + + NET N VSW+++I G G +A+
Sbjct: 290 VGLDSQVTTC--NALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLACKGRCWDAL 347
Query: 80 GMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVY 139
M G +PN+ T+SS+LP L+ GKE HG+ R G ++ F+ N L+D+Y
Sbjct: 348 NAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTETDIFIANSLIDMY 407
Query: 140 RRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWN 199
+ +G+ EA +F ++ +R I+SWN
Sbjct: 408 AK-------------------------------SGHSTEASTIFHNLD----RRNIVSWN 432
Query: 200 SMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIA 259
+MI+ Y N L EA F + G P + TF +VL ACA + L GKEIHA+ +
Sbjct: 433 AMIANYALNRLPLEAIR-FVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVR 491
Query: 260 LGLQSDTFVGGALVEMYCRYQDLVAAQMAF-----DEIENIENLLGKMKEDGFEPNVYTW 314
+GL SD FV +L++MY + L +A+ F DE+ ++G + D
Sbjct: 492 IGLTSDLFVSNSLIDMYAKCGCLHSARNVFNTSRKDEVSYNILIIGYSETDD------CL 545
Query: 315 NAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALV 374
++ LFSEM L PD+ + ++SAC++LA +++GK+VH A+R S + + +L+
Sbjct: 546 QSLNLFSEMRLLGKKPDVVSFVGVISACANLAALKQGKEVHGVALRNHLYSHLFVSNSLL 605
Query: 375 DMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHI 434
D Y KCG + A + +I D+ S N M+ Y M G + I+ F + + D +
Sbjct: 606 DFYTKCGRIDIACRLFNQILFKDVASWNTMILGYGMIGELETAISMFEAMRDDTVQYDLV 665
Query: 435 SFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKI 494
S+++ LSAC H G ++ G ++F M ++P+ HYTCMVDLL RAG + EA + I+++
Sbjct: 666 SYIAVLSACSHGGLVERGWQYFSEMLAQRLEPTEMHYTCMVDLLGRAGFVEEAAKLIQQL 725
Query: 495 PMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLA 554
P+APD+ +WGALLG C +GN+E G+ AA+ L EL+P + G Y++L+N++A GRW +
Sbjct: 726 PIAPDANIWGALLGACRIYGNVELGRRAAEHLFELKPQHCGYYILLSNIYAETGRWDEAN 785
Query: 555 RTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDR 588
+ R+ MK R K+PGCSW++ D++H F A +R
Sbjct: 786 KIRELMKSRGAKKNPGCSWVQIYDQVHAFVAEER 819
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 122/432 (28%), Positives = 201/432 (46%), Gaps = 55/432 (12%)
Query: 16 KMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYD 75
+M E D NS++ A +G EA + + N+VSW+A+I + N
Sbjct: 390 RMGTETDIFIANSLIDMYAKSGHSTEASTIFHNL-----DRRNIVSWNAMIANYALNRLP 444
Query: 76 EEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGL 135
EAI + +MQ G PNA T ++VLPACARL L GKE H R G S+ FV N L
Sbjct: 445 LEAIRFVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSL 504
Query: 136 VDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGI 195
+D+Y +CG + SA +F+ S K+EVS N +I+GY E + ++ LF +M LG + +
Sbjct: 505 IDMYAKCGCLHSARNVFNT-SRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDV 563
Query: 196 ISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHA 255
+S+ +IS ACA++ +L++GKE+H
Sbjct: 564 VSFVGVIS------------------------------------ACANLAALKQGKEVHG 587
Query: 256 LAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI--ENIENLLGKMKEDGFEPNVYT 313
+A+ L S FV +L++ Y + + A F++I +++ + + G + T
Sbjct: 588 VALRNHLYSHLFVSNSLLDFYTKCGRIDIACRLFNQILFKDVASWNTMILGYGMIGELET 647
Query: 314 WNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTAL 373
A+ +F M + D+ + +LSACS +ERG Q + + + T +
Sbjct: 648 --AISMFEAMRDDTVQYDLVSYIAVLSACSHGGLVERGWQYFSEMLAQRLEPTEMHYTCM 705
Query: 374 VDMYAKCGSLKH-ARLAYKRISTPDLVSQNAMLTAYAMHGH---GKEGIAHFRRILASGF 429
VD+ + G ++ A+L + PD A+L A ++G+ G+ H +
Sbjct: 706 VDLLGRAGFVEEAAKLIQQLPIAPDANIWGALLGACRIYGNVELGRRAAEHLFEL----- 760
Query: 430 RPDHISFLSALS 441
+P H + LS
Sbjct: 761 KPQHCGYYILLS 772
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/429 (24%), Positives = 185/429 (43%), Gaps = 47/429 (10%)
Query: 60 VSWSAVIGGF-TQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHG 118
++W+ GF T N RM G++ + T VL C+ + G E HG
Sbjct: 135 IAWNGTFDGFETYN-----------RMVRRGVQLDDHTFPFVLKLCSDSFDICKGMEVHG 183
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
+ + GF ++ +V N L+ +Y CG + +
Sbjct: 184 VVFKLGFDTDVYVGNTLLMLYGNCGFL-------------------------------ND 212
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
AR LFD+M +R ++SWN++I N Y EA + + +++R I+P + S+L
Sbjct: 213 ARRLFDEMP----ERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLL 268
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
A + + IH ++ +GL S ALV+ Y + + A F+E +
Sbjct: 269 PISAALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEV 328
Query: 299 LGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYA 358
+G W+A+ F M+ P+ T+ IL L + GK++H ++
Sbjct: 329 SWNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFS 388
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGI 418
+R G ++D+ I +L+DMYAK G A + + ++VS NAM+ YA++ E I
Sbjct: 389 MRMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAI 448
Query: 419 AHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLL 478
++ +G P+ ++F + L AC G + G E + + L ++D+
Sbjct: 449 RFVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMY 508
Query: 479 SRAGELGEA 487
++ G L A
Sbjct: 509 AKCGCLHSA 517
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 133/291 (45%), Gaps = 20/291 (6%)
Query: 236 SVLIACADMNSLRKGKEIHALAIALG-LQSDTFVGGALVEMYCRYQDLVAAQMAFDE-IE 293
++L C+ + SL + K++HAL I G L + +L+ Y ++Q + F++ +
Sbjct: 59 NLLTLCSKVQSLLQTKQVHALGILNGFLPRSVSLCASLILNYAKFQHPGSFCSLFNQTFQ 118
Query: 294 N-----IENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATM 348
N + N L + + T++ + ++ M+ + D +T +L CS +
Sbjct: 119 NCRTAFLWNTLIRAHSIAWNG---TFDGFETYNRMVRRGVQLDDHTFPFVLKLCSDSFDI 175
Query: 349 ERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAY 408
+G +VH + G+D+DV++G L+ +Y CG L AR + + D+VS N ++
Sbjct: 176 CKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMPERDVVSWNTIIGLL 235
Query: 409 AMHGHGKEGIA-HFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPS 467
+++G E +F IL S +P+ +S +S L + E + Y VK
Sbjct: 236 SVNGDYTEARNYYFWMILRSVIKPNLVSVISLLP----ISAALEDEEMTRRIHCYSVKVG 291
Query: 468 L--KHYTC--MVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
L + TC +VD + G + ++ + + + V W +++ G G
Sbjct: 292 LDSQVTTCNALVDAYGKCGSVKALWQVFNE-TVEKNEVSWNSIINGLACKG 341
>gi|414885949|tpg|DAA61963.1| TPA: hypothetical protein ZEAMMB73_954210 [Zea mays]
Length = 633
Score = 341 bits (875), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 180/515 (34%), Positives = 275/515 (53%), Gaps = 36/515 (6%)
Query: 85 MQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGD 144
+ A L P R S++ ACA+ + L+ + H +++R+ + F++N L+ +Y +C
Sbjct: 51 LHAGELAPTPRLYHSIIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCKC-- 108
Query: 145 MLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISG 204
G V++AR +FD+M R ++SW +I+G
Sbjct: 109 -----------------------------GAVSDARHVFDKMP----SRDVVSWTYLIAG 135
Query: 205 YVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQS 264
Y N + EA + D+L R P FTF S+L A G+++HALA+
Sbjct: 136 YAQNYMPAEAIGLLPDML-RARFRPNGFTFTSLLKATGACGGCSIGEQMHALAVKYNWDE 194
Query: 265 DTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEML 324
D +VG AL++MY R + + A M FD + + + GF + F+EM
Sbjct: 195 DVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIAGFARKADGETTLMKFAEMQ 254
Query: 325 SLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLK 384
+T + SA + + +E+G+ VHA+ I+ G +G ++ MYAK GS+
Sbjct: 255 RNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKLTAFVGNTMLGMYAKSGSMV 314
Query: 385 HARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACV 444
AR + R+ DLV+ N MLTA A +G GKE +AHF I G + + I+FLS L+AC
Sbjct: 315 DARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQLNQITFLSVLTACS 374
Query: 445 HAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWG 504
H G +K G +FD+M Y+V+P + HY VDLL RAG L EA F+ K+PM P + +WG
Sbjct: 375 HGGLVKEGKHYFDMMKDYNVQPEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWG 434
Query: 505 ALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRR 564
ALLG C H N + GQ AAD + EL+P++TG V+L N++A G+W+D AR R+ MK
Sbjct: 435 ALLGACRMHKNAKMGQYAADHVFELDPDDTGPPVLLYNIYASTGKWNDAARVRKMMKATG 494
Query: 565 MHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTI 599
+ K P CSW++ + +H F A D +H +S +IY +
Sbjct: 495 VKKEPACSWVQIENSVHMFVADDDTHPKSGDIYRM 529
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 107/425 (25%), Positives = 173/425 (40%), Gaps = 87/425 (20%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG++ DA+ VF MP RD +V
Sbjct: 104 MYCKCGAVSDARHVFDKMPSRD------------------------------------VV 127
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ +I G+ QN EAIG+L M PN T +S+L A S+G++ H
Sbjct: 128 SWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGACGGCSIGEQMHALA 187
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ + + +V + L+D+Y RC M A+ +F + KNEVS N +I G+ +
Sbjct: 188 VKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIAGFARKADGETTL 247
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
F +M+ R+G T FT+ S+ A
Sbjct: 248 MKFAEMQ------------------------------------RNGFGATHFTYSSMFSA 271
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE---- 296
A + +L +G+ +HA I G + FVG ++ MY + +V A+ FD ++ +
Sbjct: 272 FARIGALEQGRWVHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTW 331
Query: 297 -NLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVH 355
+L + + G A+ F E+ + + T +L+ACS ++ GK H
Sbjct: 332 NTMLTALAQYGLGK-----EAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGK--H 384
Query: 356 AYAIRCGYDSDVHIG--TALVDMYAKCGSLKHARL-AYKRISTPDLVSQNAMLTAYAMHG 412
+ + Y+ I + VD+ + G LK A + +K P A+L A MH
Sbjct: 385 YFDMMKDYNVQPEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHK 444
Query: 413 HGKEG 417
+ K G
Sbjct: 445 NAKMG 449
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 141/295 (47%), Gaps = 1/295 (0%)
Query: 220 DLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRY 279
DLL + PT + S++ ACA +L + IHA L D F+ +L+ MYC+
Sbjct: 49 DLLHAGELAPTPRLYHSIIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCKC 108
Query: 280 QDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIIL 339
+ A+ FD++ + + + G+ N A+ L +ML P+ +T +L
Sbjct: 109 GAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLL 168
Query: 340 SACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLV 399
A + G+Q+HA A++ +D DV++G+AL+DMYA+C + A + + R+ + + V
Sbjct: 169 KATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEV 228
Query: 400 SQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM 459
S NA++ +A G+ + F + +GF H ++ S SA G+++ G +
Sbjct: 229 SWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHL 288
Query: 460 AYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
K + M+ + +++G + +A + ++ D V W +L +G
Sbjct: 289 IKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMD-KRDLVTWNTMLTALAQYG 342
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 102/227 (44%), Gaps = 31/227 (13%)
Query: 56 TPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKE 115
+ N VSW+A+I GF + E + MQ G T SS+ A AR+ L G+
Sbjct: 224 SKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRW 283
Query: 116 FHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGN 175
H ++ ++G FV N ++ +Y + G M+ A K+F + ++ V+ NT++ + G
Sbjct: 284 VHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGL 343
Query: 176 VAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEA---FSM--------------- 217
EA F+++ G+Q I++ S+++ L E F M
Sbjct: 344 GKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMMKDYNVQPEIDHYVS 403
Query: 218 FRDLLMRDGI-------------EPTSFTFGSVLIACADMNSLRKGK 251
F DLL R G+ EPT+ +G++L AC + + G+
Sbjct: 404 FVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAKMGQ 450
>gi|242066458|ref|XP_002454518.1| hypothetical protein SORBIDRAFT_04g032600 [Sorghum bicolor]
gi|241934349|gb|EES07494.1| hypothetical protein SORBIDRAFT_04g032600 [Sorghum bicolor]
Length = 834
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 206/655 (31%), Positives = 313/655 (47%), Gaps = 120/655 (18%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKC SL+DA F M ER N V
Sbjct: 207 MYGKCRSLEDALHFFHGMGER------------------------------------NSV 230
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW AVI G QN GLE +L C + LS ++ H +
Sbjct: 231 SWGAVIAGCVQN-----------EQYMRGLE--------LLCRCKAITCLSTARQLHAHA 271
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEV--SCNTIIVGYCENGNVAE 178
+N F S+ V +VDVY + ++ A + F F + N +CN ++VG G AE
Sbjct: 272 IKNKFSSDRVVGTAIVDVYAKADSLVDARRAF--FGLPNHTVETCNAMMVGLVRTGLGAE 329
Query: 179 ARELFDQMEHLGV----------------------------------------------- 191
A +LF M G+
Sbjct: 330 AMQLFQFMTRSGIGFGVVSLSGVFSACAEVKGFDVDVCVRNAILDLYGKCKALVEAYLVF 389
Query: 192 ----QRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSL 247
QR +SWN++I+ N Y++ ++L R G+E FT+GSVL ACA + SL
Sbjct: 390 QEMEQRDSVSWNTIIAALEQNECYEDTIVHLNEML-RSGMEADDFTYGSVLKACAGLQSL 448
Query: 248 RKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGF 307
G +H AI GL D FV +V+MYC+ + A D I E + GF
Sbjct: 449 EYGLVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMITEALKLHDRIGGQELVSWNSIIAGF 508
Query: 308 EPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDV 367
N + A + FSEML + + PD +T +L +C++LAT+E GKQ+H I+ D
Sbjct: 509 SLNKQSEEAQKFFSEMLDMGVKPDHFTYATVLDSCANLATIELGKQIHGQIIKQEMLGDE 568
Query: 368 HIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILAS 427
I + LVDMYAKCG++ ++L ++++ D VS NAM+ YA+HG G E + F R +
Sbjct: 569 FISSTLVDMYAKCGNMPDSQLMFEKVQKLDFVSWNAMICGYALHGQGFEALEMFERTQKA 628
Query: 428 GFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMVDLLSRAGELGE 486
P+H +F++ L AC H G + G +F LM + Y ++P L+H+ CM E
Sbjct: 629 NVAPNHATFVAVLRACSHVGLLDDGCRYFHLMTSRYKLEPQLEHFACMGP--------QE 680
Query: 487 AYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAY 546
A +FI+ +P+ D+V+W LL C ++E + AA ++ L+P+++ Y++L+N++A
Sbjct: 681 ALKFIRSMPLEADAVIWKTLLSICKIRQDVEVAETAASNVLRLDPDDSSVYILLSNVYAE 740
Query: 547 AGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
+G+W D++RTR+ M+ R+ K PGCSWIE + E+H F ++ H RS E+Y +++
Sbjct: 741 SGKWVDVSRTRRLMRQGRLKKEPGCSWIEVQSEMHGFLVGEKVHPRSREVYEMLN 795
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 146/562 (25%), Positives = 248/562 (44%), Gaps = 69/562 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +CG A VF MP RD VSWN+++TA A G A L M P++V
Sbjct: 75 MYARCGGAAHAHGVFDTMPHRDTVSWNTMLTAYAHMGDTGMATSLLCVMPD-----PDVV 129
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A++ G+ Q G + +G+ M G+ P+ TL+ +L AC L L+LG + H
Sbjct: 130 SWNALLSGYCQRGMFRDLVGLSIEMARCGVAPDRTTLAVLLKACGGLDDLALGVQIHALA 189
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGN----- 175
+ G + + LVD+Y +C + AL F +N VS +I G +N
Sbjct: 190 VKTGLEMDVRAGSALVDMYGKCRSLEDALHFFHGMGERNSVSWGAVIAGCVQNEQYMRGL 249
Query: 176 -----------VAEAREL--------FDQMEHLGV-----------------------QR 193
++ AR+L F +G
Sbjct: 250 ELLCRCKAITCLSTARQLHAHAIKNKFSSDRVVGTAIVDVYAKADSLVDARRAFFGLPNH 309
Query: 194 GIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEI 253
+ + N+M+ G V L EA +F+ + R GI + V ACA++
Sbjct: 310 TVETCNAMMVGLVRTGLGAEAMQLFQ-FMTRSGIGFGVVSLSGVFSACAEVK-------- 360
Query: 254 HALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYT 313
G D V A++++Y + + LV A + F E+E +++ E N
Sbjct: 361 -------GFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNTIIAALEQNECY 413
Query: 314 WNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTAL 373
+ + +EML + D +T G +L AC+ L ++E G VH AI+ G D + + +
Sbjct: 414 EDTIVHLNEMLRSGMEADDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTV 473
Query: 374 VDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDH 433
VDMY KCG + A + RI +LVS N+++ ++++ +E F +L G +PDH
Sbjct: 474 VDMYCKCGMITEALKLHDRIGGQELVSWNSIIAGFSLNKQSEEAQKFFSEMLDMGVKPDH 533
Query: 434 ISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKK 493
++ + L +C + +I+ G + + ++ + +VD+ ++ G + ++ +K
Sbjct: 534 FTYATVLDSCANLATIELGKQIHGQIIKQEMLGDEFISSTLVDMYAKCGNMPDSQLMFEK 593
Query: 494 IPMAPDSVMWGALLGGCVSHGN 515
+ D V W A++ G HG
Sbjct: 594 V-QKLDFVSWNAMICGYALHGQ 614
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 128/460 (27%), Positives = 202/460 (43%), Gaps = 64/460 (13%)
Query: 96 TLSSVLPACARL--QKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFS 153
T S V CA L+ G+ H + +GF+ FV N L+ +Y RCG A +F
Sbjct: 31 TFSHVYQLCASAGHSALATGQAAHARMLVSGFVPTMFVSNCLLQMYARCGGAAHAHGVFD 90
Query: 154 KFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDE 213
++ VS NT++ Y G+ A L M ++SWN+++SGY
Sbjct: 91 TMPHRDTVSWNTMLTAYAHMGDTGMATSLLCVMP----DPDVVSWNALLSGYCQRG---- 142
Query: 214 AFSMFRDL------LMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTF 267
MFRDL + R G+ P T +L AC ++ L G +IHALA+ GL+ D
Sbjct: 143 ---MFRDLVGLSIEMARCGVAPDRTTLAVLLKACGGLDDLALGVQIHALAVKTGLEMDVR 199
Query: 268 VGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLD 327
G ALV+MY + + L A F + E N +W A +++
Sbjct: 200 AGSALVDMYGKCRSLEDALHFFHGMG--------------ERNSVSWGA------VIAGC 239
Query: 328 LTPDIYTVGI-ILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHA 386
+ + Y G+ +L C ++ + +Q+HA+AI+ + SD +GTA+VD+YAK SL A
Sbjct: 240 VQNEQYMRGLELLCRCKAITCLSTARQLHAHAIKNKFSSDRVVGTAIVDVYAKADSLVDA 299
Query: 387 RLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHA 446
R A+ + + + NAM+ G G E + F+ + SG +S SAC
Sbjct: 300 RRAFFGLPNHTVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGIGFGVVSLSGVFSACAEV 359
Query: 447 GSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGAL 506
+DV +++ ++DL + L EAY +++ DSV W +
Sbjct: 360 KG-------------FDVDVCVRN--AILDLYGKCKALVEAYLVFQEMEQ-RDSVSWNTI 403
Query: 507 LGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAY 546
+ LE + D ++ L N M A+ F Y
Sbjct: 404 IAA------LEQNECYEDTIVHL--NEMLRSGMEADDFTY 435
>gi|242076924|ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
gi|241939581|gb|EES12726.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
Length = 865
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 196/634 (30%), Positives = 329/634 (51%), Gaps = 74/634 (11%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
M+ +CG++D A ++F + E NS++ V ALE + M D +V
Sbjct: 182 MFVRCGTVDLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERD-----VV 236
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ ++ +Q+G EA+ M+ MQ++G+ ++ T +S L ACARL L GK+ H +
Sbjct: 237 SWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQV 296
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
RN +P+V + LV++Y +CG A +F+ +N V+ +I G+ ++G E+
Sbjct: 297 IRNLPCIDPYVASALVELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESV 356
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
ELF+QM +L+ D F +++
Sbjct: 357 ELFNQMR-------------------------------AELMTLD-----QFALATLISG 380
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL-- 298
C L G+++H+L + G V +L+ MY + +L +A+ F + + +
Sbjct: 381 CCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFRFMNEKDIVSW 440
Query: 299 ------------LGKMKE--DGFE-PNVYTWNAM--------------QLFSEMLS-LDL 328
+ K +E DG NV TWNAM ++++ MLS D+
Sbjct: 441 TSMITAHSQVGNIAKAREFFDGMSTKNVITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDV 500
Query: 329 TPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARL 388
PD T + C+ L + G Q+ ++ G D + A++ MY+KCG + AR
Sbjct: 501 RPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLILDTSVANAVITMYSKCGRILEARK 560
Query: 389 AYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGS 448
+ ++ D+VS NAM+T Y+ HG GK+ I F IL G +PD+IS+++ LS C H+G
Sbjct: 561 VFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGL 620
Query: 449 IKTGSEFFDLMA-YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALL 507
++ G +FD+M +++ P L+H++CMVDLL RAG L EA + I ++PM P + +WGALL
Sbjct: 621 VQEGKSYFDMMKRVHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDEMPMKPTAEVWGALL 680
Query: 508 GGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHK 567
C HGN E ++AA + EL+ ++G+Y+++A ++A AG+ D A+ R+ M+D+ + K
Sbjct: 681 SACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKK 740
Query: 568 SPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
+PG SW+E +++H F+A D SH + I +D
Sbjct: 741 NPGYSWMEVNNKVHVFKADDVSHPQVIAIRKKLD 774
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 140/550 (25%), Positives = 255/550 (46%), Gaps = 51/550 (9%)
Query: 2 YGKCGSLDDAKKVFKM-MPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
Y CG+L DA+++ + + ++ N ++ G + +A+E RM + D +
Sbjct: 49 YLSCGALPDARRLLLTDIAHPNVITHNVMLNGYVKLGRLSDAVELFGRMPARD-----VA 103
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEG-LEPNARTLSSVLPACARLQKLSLGKEFHGY 119
SW+ ++ G+ Q+ ++ M G PNA T + + +C L + SL + G
Sbjct: 104 SWNTLMSGYFQSQQYLASLESFVSMHRSGDSSPNAFTFAYAMKSCGALGERSLALQLLGM 163
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ + G + V LVD++ RCG + A ++F + N+++VGY + V A
Sbjct: 164 VQKFGSQDDSDVAAALVDMFVRCGTVDLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHA 223
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
ELFD M +R ++SWN M+S + EA M D+ + G+ S T+ S L
Sbjct: 224 LELFDSMP----ERDVVSWNMMVSALSQSGRVREALDMVVDMQSK-GVRLDSTTYTSSLT 278
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
ACA ++SLR GK++HA I D +V ALVE+Y + A+ F+ + + N+
Sbjct: 279 ACARLSSLRWGKQLHAQVIRNLPCIDPYVASALVELYAKCGCFKEAKGVFNSLHDRNNVA 338
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
+ GF + +++LF++M + +T D + + ++S C S + G+Q+H+ +
Sbjct: 339 WTVLIAGFLQHGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCL 398
Query: 360 RCGYDSDVHIGTALVDMYAKC-------------------------------GSLKHARL 388
+ G V + +L+ MYAKC G++ AR
Sbjct: 399 KSGQIQAVVVSNSLISMYAKCDNLQSAESIFRFMNEKDIVSWTSMITAHSQVGNIAKARE 458
Query: 389 AYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILA-SGFRPDHISFLSALSACVHAG 447
+ +ST ++++ NAML AY HG ++G+ + +L+ RPD +++++ C G
Sbjct: 459 FFDGMSTKNVITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVRPDWVTYVTLFKGCADLG 518
Query: 448 SIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEA---YEFIKKIPMAPDSVMWG 504
+ K G + + ++ + S+ G + EA ++F+ D V W
Sbjct: 519 ANKLGDQIIGRTVKVGLILDTSVANAVITMYSKCGRILEARKVFDFLN----VKDIVSWN 574
Query: 505 ALLGGCVSHG 514
A++ G HG
Sbjct: 575 AMITGYSQHG 584
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 116/492 (23%), Positives = 206/492 (41%), Gaps = 76/492 (15%)
Query: 95 RTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALK-IFS 153
+ + L +C L+ + HG + G S F+ N L+ Y CG + A + + +
Sbjct: 5 QAFADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALPDARRLLLT 64
Query: 154 KFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDE 213
+ N ++ N ++ GY + G +++A ELF +M R + SWN+++SGY + Y
Sbjct: 65 DIAHPNVITHNVMLNGYVKLGRLSDAVELFGRMP----ARDVASWNTLMSGYFQSQQYLA 120
Query: 214 AFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALV 273
+ F + P +FTF + +C + ++ + G Q D+ V ALV
Sbjct: 121 SLESFVSMHRSGDSSPNAFTFAYAMKSCGALGERSLALQLLGMVQKFGSQDDSDVAAALV 180
Query: 274 EMYCRYQDLVAAQMAFDEIENI------ENLLGKMKEDGF-----------EPNVYTWNA 316
+M+ R + A F I+ L+G +K G E +V +WN
Sbjct: 181 DMFVRCGTVDLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNM 240
Query: 317 M-----QLFSEMLSLDLTPDIYTVGI---------ILSACSSLATMERGKQVHAYAIRCG 362
M Q +LD+ D+ + G+ L+AC+ L+++ GKQ+HA IR
Sbjct: 241 MVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNL 300
Query: 363 YDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFR 422
D ++ +ALV++YAKCG K A+ + + + V+ ++ + HG E + F
Sbjct: 301 PCIDPYVASALVELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFN 360
Query: 423 RILASGFRPDHISFLSALSAC-----------VHAGSIKTGS------------------ 453
++ A D + + +S C +H+ +K+G
Sbjct: 361 QMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCD 420
Query: 454 ------EFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALL 507
F M D+ +T M+ S+ G + +A EF + + + W A+L
Sbjct: 421 NLQSAESIFRFMNEKDIVS----WTSMITAHSQVGNIAKAREFFDGMS-TKNVITWNAML 475
Query: 508 GGCVSHGNLEFG 519
G + HG E G
Sbjct: 476 GAYIQHGAEEDG 487
>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
Length = 1106
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 196/598 (32%), Positives = 302/598 (50%), Gaps = 73/598 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +CGSL +A+ VF+ RD ++
Sbjct: 475 MYRRCGSLMEAQNVFEGTQARD------------------------------------VI 498
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+++I G Q+G E A + MQ E LEP+ T +SVL C + L LGK+ HG I
Sbjct: 499 SWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRI 558
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
T +G + + N L+++Y RCG + +AR
Sbjct: 559 TESGLQLDVNLGNALINMYIRCGSL-------------------------------QDAR 587
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+F ++H R ++SW +MI G D +A +F + +G P TF S+L
Sbjct: 588 NVFHSLQH----RDVMSWTAMIGGCADQGEDMKAIELFWQM-QNEGFRPVKSTFSSILKV 642
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C L +GK++ A + G + DT VG AL+ Y + + A+ FD++ + + +
Sbjct: 643 CTSSACLDEGKKVIAYILNSGYELDTGVGNALISAYSKSGSMTDAREVFDKMPSRDIVSW 702
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G+ N A++ +M D+ P+ ++ +L+ACSS + +E GK+VHA ++
Sbjct: 703 NKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSSFSALEEGKRVHAEIVK 762
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
DV +G AL+ MYAKCGS A+ + I ++V+ NAM+ AYA HG + +
Sbjct: 763 RKLQGDVRVGAALISMYAKCGSQGEAQEVFDNIIEKNVVTWNAMINAYAQHGLASKALGF 822
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMVDLLS 479
F + G +PD +F S LSAC HAG + G + F M + Y V P+++HY C+V LL
Sbjct: 823 FNCMEKEGIKPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLG 882
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
RA EA I ++P PD+ +W LLG C HGN+ + AA+ ++L N Y++
Sbjct: 883 RARRFQEAETLINQMPFPPDAAVWETLLGACRIHGNIALAEHAANNALKLNARNPAVYIL 942
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
L+N++A AGRW D+A+ R+ M+ R + K PG SWIE + IH+F A+DRSH + EIY
Sbjct: 943 LSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIY 1000
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 147/538 (27%), Positives = 244/538 (45%), Gaps = 81/538 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC S+ DA +VFK MP RD ++
Sbjct: 71 MYVKCRSVLDAHQVFKEMPRRD------------------------------------VI 94
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+++I + Q G+ ++A + MQ G PN T S+L AC +L GK+ H I
Sbjct: 95 SWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQI 154
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G+ +P V N L+ +Y +CGD+ A ++F+ S ++ VS NT++ Y + V E
Sbjct: 155 IKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECL 214
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LF QM G+ +++ +++ + S+ DE
Sbjct: 215 GLFGQMSSEGISPDKVTYINLLDAFTTPSMLDE--------------------------- 247
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
GK IH L + GL SD VG ALV M R D+ +A+ AF + + ++
Sbjct: 248 ---------GKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVY 298
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
+ + A + + M S + + T IL+ACS+ +E GK +H++
Sbjct: 299 NALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISE 358
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
G+ SDV IG AL+ MYA+CG L AR + + DL+S NA++ YA E +
Sbjct: 359 DGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRL 418
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSR 480
++++ + G +P ++FL LSAC ++ + G + + +K + ++++ R
Sbjct: 419 YKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRR 478
Query: 481 AGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE-----FGQIAADRLIELEPNN 533
G L EA + A D + W +++ G HG+ E F ++ + ELEP+N
Sbjct: 479 CGSLMEAQNVFEGT-QARDVISWNSMIAGHAQHGSYETAYKLFQEMQNE---ELEPDN 532
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 152/583 (26%), Positives = 265/583 (45%), Gaps = 85/583 (14%)
Query: 8 LDDAKKVFKMMPER----DCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWS 63
LD+ K++ K+ E D ++VT C G V A + + + D +V ++
Sbjct: 245 LDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRD-----VVVYN 299
Query: 64 AVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRN 123
A+I Q+G++ EA +RM+++G+ N T S+L AC+ + L GK H +I+ +
Sbjct: 300 ALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISED 359
Query: 124 GFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELF 183
G S+ + N L+ +Y RCGD+ A ++F ++ +S N II GY + EA L+
Sbjct: 360 GHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLY 419
Query: 184 DQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACAD 243
QM+ GV+ G +++ ++S ++S Y +
Sbjct: 420 KQMQSEGVKPGRVTFLHLLSACANSSAYAD------------------------------ 449
Query: 244 MNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMK 303
GK IH + G++S+ + AL+ MY R L+ AQ F+ G
Sbjct: 450 ------GKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFE---------GTQA 494
Query: 304 EDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSSLATME 349
D V +WN+M +LF EM + +L PD T +LS C + +E
Sbjct: 495 RD-----VISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALE 549
Query: 350 RGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYA 409
GKQ+H G DV++G AL++MY +CGSL+ AR + + D++S AM+ A
Sbjct: 550 LGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCA 609
Query: 410 MHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEF--FDLMAYYDVKPS 467
G + I F ++ GFRP +F S L C + + G + + L + Y++
Sbjct: 610 DQGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYELDTG 669
Query: 468 LKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLI 527
+ + ++ S++G + +A E K+P + D V W ++ G +G GQ A +
Sbjct: 670 VGN--ALISAYSKSGSMTDAREVFDKMP-SRDIVSWNKIIAGYAQNG---LGQTAVEFAY 723
Query: 528 ELEPN----NTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMH 566
+++ N ++V L N + + R ++ R++
Sbjct: 724 QMQEQDVVPNKFSFVSLLNACSSFSALEEGKRVHAEIVKRKLQ 766
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 137/293 (46%), Gaps = 11/293 (3%)
Query: 228 EPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQM 287
E T+ ++L C L + K IHA + + D F+ L+ MY + + ++ A
Sbjct: 24 ETERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQ 83
Query: 288 AFDEIENIE-----NLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSAC 342
F E+ + +L+ + GF+ A QLF EM + P+ T IL+AC
Sbjct: 84 VFKEMPRRDVISWNSLISCYAQQGFKKK-----AFQLFEEMQNAGFIPNKITYISILTAC 138
Query: 343 SSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQN 402
S A +E GK++H+ I+ GY D + +L+ MY KCG L AR + IS D+VS N
Sbjct: 139 YSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYN 198
Query: 403 AMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYY 462
ML YA + KE + F ++ + G PD +++++ L A + G L
Sbjct: 199 TMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEE 258
Query: 463 DVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
+ ++ T +V + R G++ A + K D V++ AL+ HG+
Sbjct: 259 GLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTA-DRDVVVYNALIAALAQHGH 310
>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 629
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 180/546 (32%), Positives = 302/546 (55%), Gaps = 35/546 (6%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
NLV+W+ +I F Q G +AI + M+ G P+ T SSVL AC L L+LGK+ H
Sbjct: 15 NLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLH 74
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
+ R G + V LVD+Y +C +G+V
Sbjct: 75 SRVIRLGLALDVCVGCSLVDMYAKCA----------------------------ADGSVD 106
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYD-EAFSMFRDLLMRDGIEPTSFTFGS 236
++R++F+QM + ++SW ++I+ Y + D EA +F ++ I P F+F S
Sbjct: 107 DSRKVFEQMP----EHNVMSWTAIITAYAQSGECDKEAIELFCKMI-SGHIRPNHFSFSS 161
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
VL AC +++ G+++++ A+ LG+ S VG +L+ MY R + A+ AFD +
Sbjct: 162 VLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKN 221
Query: 297 NLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHA 356
+ DG+ N+ + A LF+E+ + +T +LS +S+ M +G+Q+H
Sbjct: 222 LVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHG 281
Query: 357 YAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKE 416
++ GY S+ I AL+ MY++CG+++ A + + +++S +M+T +A HG
Sbjct: 282 RLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATR 341
Query: 417 GIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMV 475
+ F ++L +G +P+ I++++ LSAC H G I G + F+ M + + P ++HY CMV
Sbjct: 342 ALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMV 401
Query: 476 DLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTG 535
DLL R+G L EA EFI +P+ D+++W LLG C HGN E G+ AA+ ++E EP++
Sbjct: 402 DLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPA 461
Query: 536 NYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEE 595
Y++L+NL A AG+W D+ + R+ MK+R + K GCSWIE + +H+F + SH ++ +
Sbjct: 462 AYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQ 521
Query: 596 IYTIID 601
IY +D
Sbjct: 522 IYQELD 527
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 161/356 (45%), Gaps = 74/356 (20%)
Query: 1 MYGKC---GSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETP 57
MY KC GS+DD++KVF+ MPE + +SW +++TA A +G EC
Sbjct: 95 MYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYAQSG------EC------------ 136
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
D+EAI + +M + + PN + SSVL AC L G++ +
Sbjct: 137 -----------------DKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVY 179
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
Y + G S V N L+ +Y R G M A K F KN VS N I+ GY +N
Sbjct: 180 SYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSE 239
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
EA LF+++ G+ GI ++FTF S+
Sbjct: 240 EAFLLFNEIADTGI--GI----------------------------------SAFTFASL 263
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
L A + ++ KG++IH + G +S+ + AL+ MY R ++ AA F+E+E+
Sbjct: 264 LSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNV 323
Query: 298 LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ 353
+ GF + + A+++F +ML P+ T +LSACS + + G++
Sbjct: 324 ISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQK 379
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 78/182 (42%), Gaps = 38/182 (20%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +CG+++ A +VF M +R N++
Sbjct: 301 MYSRCGNIEAAFQVFNEMEDR------------------------------------NVI 324
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLG-KEFHGY 119
SW+++I GF ++G+ A+ M +M G +PN T +VL AC+ + +S G K F+
Sbjct: 325 SWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSM 384
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCE-NGNVAE 178
+G + +VD+ R G ++ A++ + + + ++G C +GN
Sbjct: 385 YKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTEL 444
Query: 179 AR 180
R
Sbjct: 445 GR 446
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 56/127 (44%), Gaps = 2/127 (1%)
Query: 390 YKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSI 449
+ ++ +LV+ M+T +A G ++ I F + SG+ PD ++ S LSAC G +
Sbjct: 8 FDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLL 67
Query: 450 KTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPD-SVM-WGALL 507
G + + + + +VD+ ++ G + K P+ +VM W A++
Sbjct: 68 ALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAII 127
Query: 508 GGCVSHG 514
G
Sbjct: 128 TAYAQSG 134
>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
Length = 672
Score = 341 bits (874), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 184/551 (33%), Positives = 308/551 (55%), Gaps = 18/551 (3%)
Query: 55 ETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGK 114
+ PNL+ W+ + G N A+ + M + GL PN+ + +L +CA+ + L G+
Sbjct: 26 QEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKSCAKSKALIEGQ 85
Query: 115 EFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
+ HG++ + G+ + +V L+ +Y + G + A K+F + S ++ VS +I GY G
Sbjct: 86 QIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTALITGYASRG 145
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTF 234
+ AR+LFD++ + ++SWN+MISGYV+ + EA +++D+ M+ ++P T
Sbjct: 146 YINNARKLFDEIS----VKDVVSWNAMISGYVETCNFKEALELYKDM-MKTNVKPDESTM 200
Query: 235 GSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAA-----QMAF 289
+V+ ACA S+ G+++H+ G S+ + L+++Y + ++ A +A
Sbjct: 201 VTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQGLAK 260
Query: 290 DEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATME 349
++ + L+G N+Y A+ LF EML +P+ T+ +L AC+ L ++
Sbjct: 261 KDVISWNTLIGGHTH----MNLYK-EALLLFQEMLRSGESPNDVTMLSVLPACAHLGAID 315
Query: 350 RGKQVHAYAIR--CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTA 407
G+ +H Y + G + + T+L+DMYAKCG ++ A+ + + T L S NAM+
Sbjct: 316 IGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFG 375
Query: 408 YAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKP 466
+AMHG F ++ +G PD I+F+ LSAC H+G + G F M+ Y + P
Sbjct: 376 FAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDYKITP 435
Query: 467 SLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRL 526
L+HY CM+DLL G EA E I+ +PM PD V+W +LL C H N+E G+ A L
Sbjct: 436 KLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKACKMHNNVELGESYAQNL 495
Query: 527 IELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRAS 586
I++EP N G+YV+L+N++A AGRW +A+ R + D+ + K+PGCS IE +H+F
Sbjct: 496 IKIEPENPGSYVLLSNIYATAGRWDQVAKIRTLLNDKGIKKAPGCSSIEIDSVVHEFIIG 555
Query: 587 DRSHDRSEEIY 597
D+ H R+ EIY
Sbjct: 556 DKFHPRNREIY 566
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 118/447 (26%), Positives = 208/447 (46%), Gaps = 81/447 (18%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY + G L+DA KVF R VS+ +++T A+ G + A + + +S D +V
Sbjct: 109 MYAQNGRLEDAHKVFDRSSHRHVVSYTALITGYASRGYINNARKLFDEISVKD-----VV 163
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A+I G+ + +EA+ + M ++P+ T+ +V+ ACA+ + LG++ H +I
Sbjct: 164 SWNAMISGYVETCNFKEALELYKDMMKTNVKPDESTMVTVVSACAQSGSIELGRQLHSWI 223
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+GF SN +VN L+D+Y +CG++ +A +F + K+ +S NT+I
Sbjct: 224 EDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQGLAKKDVISWNTLI------------- 270
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
G+ +LY EA +F+++L R G P T SVL A
Sbjct: 271 ----------------------GGHTHMNLYKEALLLFQEML-RSGESPNDVTMLSVLPA 307
Query: 241 CADMNSLRKGKEIHALAIAL--GLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
CA + ++ G+ IH G+ + + + +L++MY + D+ AA+ FD +
Sbjct: 308 CAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSM------ 361
Query: 299 LGKMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSS 344
++ +WNAM LFS+M + PD T +LSACS
Sbjct: 362 --------LTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSH 413
Query: 345 LATMERGKQV-----HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST-PDL 398
++ G+ + Y I + H G ++D+ CG K A+ + + PD
Sbjct: 414 SGMLDLGRHIFRSMSQDYKITPKLE---HYG-CMIDLLGHCGLFKEAKEMIRTMPMEPDG 469
Query: 399 VSQNAMLTAYAMHGHGKEGIAHFRRIL 425
V ++L A MH + + G ++ + ++
Sbjct: 470 VIWCSLLKACKMHNNVELGESYAQNLI 496
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 103/443 (23%), Positives = 193/443 (43%), Gaps = 74/443 (16%)
Query: 148 ALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVD 207
A+ IF N + NT+ G+ N + A +L+ M LG+
Sbjct: 18 AISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLL--------------- 62
Query: 208 NSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTF 267
P S++F +L +CA +L +G++IH + LG D +
Sbjct: 63 ---------------------PNSYSFPFLLKSCAKSKALIEGQQIHGHVLKLGYDLDMY 101
Query: 268 VGGALVEMYCRYQDLVAAQMAFD-----EIENIENLLGKMKEDGFEPN------------ 310
V +L+ MY + L A FD + + L+ G+ N
Sbjct: 102 VNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTALITGYASRGYINNARKLFDEISVKD 161
Query: 311 VYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHA 356
V +WNAM +L+ +M+ ++ PD T+ ++SAC+ ++E G+Q+H+
Sbjct: 162 VVSWNAMISGYVETCNFKEALELYKDMMKTNVKPDESTMVTVVSACAQSGSIELGRQLHS 221
Query: 357 YAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKE 416
+ G+ S++ I L+D+Y+KCG ++ A ++ ++ D++S N ++ + KE
Sbjct: 222 WIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQGLAKKDVISWNTLIGGHTHMNLYKE 281
Query: 417 GIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGS--EFFDLMAYYDVKPSLKHYTCM 474
+ F+ +L SG P+ ++ LS L AC H G+I G + V + T +
Sbjct: 282 ALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSL 341
Query: 475 VDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG--NLEFGQIAADRLIELEPN 532
+D+ ++ G++ A + + + W A++ G HG N F + R ++P+
Sbjct: 342 IDMYAKCGDIEAAKQVFDSM-LTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPD 400
Query: 533 NTGNYVMLANLFAYAGRWSDLAR 555
+ +V L + +++G DL R
Sbjct: 401 DI-TFVGLLSACSHSGML-DLGR 421
>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 341 bits (874), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 180/546 (32%), Positives = 302/546 (55%), Gaps = 35/546 (6%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
NLV+W+ +I F Q G +AI + M+ G P+ T SSVL AC L L+LGK+ H
Sbjct: 20 NLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLH 79
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
+ R G + V LVD+Y +C +G+V
Sbjct: 80 SRVIRLGLALDVCVGCSLVDMYAKCA----------------------------ADGSVD 111
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYD-EAFSMFRDLLMRDGIEPTSFTFGS 236
++R++F+QM + ++SW ++I+ Y + D EA +F ++ I P F+F S
Sbjct: 112 DSRKVFEQMP----EHNVMSWTAIITAYAQSGECDKEAIELFCKMI-SGHIRPNHFSFSS 166
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
VL AC +++ G+++++ A+ LG+ S VG +L+ MY R + A+ AFD +
Sbjct: 167 VLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKN 226
Query: 297 NLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHA 356
+ DG+ N+ + A LF+E+ + +T +LS +S+ M +G+Q+H
Sbjct: 227 LVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHG 286
Query: 357 YAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKE 416
++ GY S+ I AL+ MY++CG+++ A + + +++S +M+T +A HG
Sbjct: 287 RLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATR 346
Query: 417 GIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMV 475
+ F ++L +G +P+ I++++ LSAC H G I G + F+ M + + P ++HY CMV
Sbjct: 347 ALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMV 406
Query: 476 DLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTG 535
DLL R+G L EA EFI +P+ D+++W LLG C HGN E G+ AA+ ++E EP++
Sbjct: 407 DLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPA 466
Query: 536 NYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEE 595
Y++L+NL A AG+W D+ + R+ MK+R + K GCSWIE + +H+F + SH ++ +
Sbjct: 467 AYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQ 526
Query: 596 IYTIID 601
IY +D
Sbjct: 527 IYQELD 532
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 161/356 (45%), Gaps = 74/356 (20%)
Query: 1 MYGKC---GSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETP 57
MY KC GS+DD++KVF+ MPE + +SW +++TA A +G EC
Sbjct: 100 MYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYAQSG------EC------------ 141
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
D+EAI + +M + + PN + SSVL AC L G++ +
Sbjct: 142 -----------------DKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVY 184
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
Y + G S V N L+ +Y R G M A K F KN VS N I+ GY +N
Sbjct: 185 SYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSE 244
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
EA LF+++ G+ GI ++FTF S+
Sbjct: 245 EAFLLFNEIADTGI--GI----------------------------------SAFTFASL 268
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
L A + ++ KG++IH + G +S+ + AL+ MY R ++ AA F+E+E+
Sbjct: 269 LSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNV 328
Query: 298 LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ 353
+ GF + + A+++F +ML P+ T +LSACS + + G++
Sbjct: 329 ISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQK 384
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 78/182 (42%), Gaps = 38/182 (20%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +CG+++ A +VF M +R N++
Sbjct: 306 MYSRCGNIEAAFQVFNEMEDR------------------------------------NVI 329
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLG-KEFHGY 119
SW+++I GF ++G+ A+ M +M G +PN T +VL AC+ + +S G K F+
Sbjct: 330 SWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSM 389
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCE-NGNVAE 178
+G + +VD+ R G ++ A++ + + + ++G C +GN
Sbjct: 390 YKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTEL 449
Query: 179 AR 180
R
Sbjct: 450 GR 451
Score = 39.7 bits (91), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 56/127 (44%), Gaps = 2/127 (1%)
Query: 390 YKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSI 449
+ ++ +LV+ M+T +A G ++ I F + SG+ PD ++ S LSAC G +
Sbjct: 13 FDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLL 72
Query: 450 KTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPD-SVM-WGALL 507
G + + + + +VD+ ++ G + K P+ +VM W A++
Sbjct: 73 ALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAII 132
Query: 508 GGCVSHG 514
G
Sbjct: 133 TAYAQSG 139
>gi|449524410|ref|XP_004169216.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 684
Score = 341 bits (874), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 199/574 (34%), Positives = 313/574 (54%), Gaps = 53/574 (9%)
Query: 24 VSWNSVVTACAANGLVLEALEC--LERMSSLDNET--PNLVSWSAVIGGFTQNGYDEEAI 79
V +S VT C N LV +C ++ + + NET N VSW+++I G G +A+
Sbjct: 141 VGLDSQVTTC--NALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLACKGRCWDAL 198
Query: 80 GMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVY 139
M G +PN+ T+SS+LP L+ GKE HG+ R G ++ F+ N L+D+Y
Sbjct: 199 NAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTETDIFIANSLIDMY 258
Query: 140 RRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWN 199
+ +G+ EA +F ++ +R I+SWN
Sbjct: 259 AK-------------------------------SGHSTEASTIFHNLD----RRNIVSWN 283
Query: 200 SMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIA 259
+MI+ Y N L EA F + G P + TF +VL ACA + L GKEIHA+ +
Sbjct: 284 AMIANYALNRLPLEAIR-FVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVR 342
Query: 260 LGLQSDTFVGGALVEMYCRYQDLVAAQMAF-----DEIENIENLLGKMKEDGFEPNVYTW 314
+GL SD FV +L++MY + L +A+ F DE+ ++G + D
Sbjct: 343 IGLTSDLFVSNSLIDMYAKCGCLHSARNVFNTSRKDEVSYNILIIGYSETDD------CL 396
Query: 315 NAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALV 374
++ LFSEM L PD+ + ++SAC++LA +++GK+VH A+R S + + +L+
Sbjct: 397 QSLNLFSEMRLLGKKPDVVSFVGVISACANLAALKQGKEVHGVALRNHLYSHLFVSNSLL 456
Query: 375 DMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHI 434
D Y KCG + A + +I D+ S N M+ Y M G + I+ F + + D +
Sbjct: 457 DFYTKCGRIDIACRLFNQILFKDVASWNTMILGYGMIGELETAISMFEAMRDDTVQYDLV 516
Query: 435 SFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKI 494
S+++ LSAC H G ++ G ++F M ++P+ HYTCMVDLL RAG + EA + I+++
Sbjct: 517 SYIAVLSACSHGGLVERGWQYFSEMLAQRLEPTEMHYTCMVDLLGRAGFVEEAAKLIQQL 576
Query: 495 PMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLA 554
P+APD+ +WGALLG C +GN+E G+ AA+ L EL+P + G Y++L+N++A GRW +
Sbjct: 577 PIAPDANIWGALLGACRIYGNVELGRRAAEHLFELKPQHCGYYILLSNIYAETGRWDEAN 636
Query: 555 RTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDR 588
+ R+ MK R K+PGCSW++ D++H F A +R
Sbjct: 637 KIRELMKSRGAKKNPGCSWVQIYDQVHAFVAEER 670
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 123/444 (27%), Positives = 195/444 (43%), Gaps = 79/444 (17%)
Query: 16 KMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYD 75
+M E D NS++ A +G EA + + N+VSW+A+I + N
Sbjct: 241 RMGTETDIFIANSLIDMYAKSGHSTEASTIFHNL-----DRRNIVSWNAMIANYALNRLP 295
Query: 76 EEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGL 135
EAI + +MQ G PNA T ++VLPACARL L GKE H R G S+ FV N L
Sbjct: 296 LEAIRFVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSL 355
Query: 136 VDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGI 195
+D+Y +CG + SA +F+ S K+EVS N +I+GY E + ++ LF +M LG +
Sbjct: 356 IDMYAKCGCLHSARNVFNT-SRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKK--- 411
Query: 196 ISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHA 255
P +F V+ ACA++ +L++GKE+H
Sbjct: 412 ---------------------------------PDVVSFVGVISACANLAALKQGKEVHG 438
Query: 256 LAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWN 315
+A+ L S FV +L++ Y + + A F++I +V +WN
Sbjct: 439 VALRNHLYSHLFVSNSLLDFYTKCGRIDIACRLFNQI--------------LFKDVASWN 484
Query: 316 AM--------------QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRC 361
M +F M + D+ + +LSACS +ERG Q + +
Sbjct: 485 TMILGYGMIGELETAISMFEAMRDDTVQYDLVSYIAVLSACSHGGLVERGWQYFSEMLAQ 544
Query: 362 GYDSDVHIGTALVDMYAKCGSLKH-ARLAYKRISTPDLVSQNAMLTAYAMHGH---GKEG 417
+ T +VD+ + G ++ A+L + PD A+L A ++G+ G+
Sbjct: 545 RLEPTEMHYTCMVDLLGRAGFVEEAAKLIQQLPIAPDANIWGALLGACRIYGNVELGRRA 604
Query: 418 IAHFRRILASGFRPDHISFLSALS 441
H + +P H + LS
Sbjct: 605 AEHLFEL-----KPQHCGYYILLS 623
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 99/403 (24%), Positives = 176/403 (43%), Gaps = 35/403 (8%)
Query: 85 MQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGD 144
M G++ + T VL C+ + G E HG + + GF ++ +V N L+ +Y CG
Sbjct: 1 MVRRGVQLDDHTFPFVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGF 60
Query: 145 MLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISG 204
+ +AR LFD+M +R ++SWN++I
Sbjct: 61 L-------------------------------NDARRLFDEMP----ERDVVSWNTIIGL 85
Query: 205 YVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQS 264
N Y EA + + +++R I+P + S+L A + + IH ++ +GL S
Sbjct: 86 LSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLPISAALEDEEMTRRIHCYSVKVGLDS 145
Query: 265 DTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEML 324
ALV+ Y + + A F+E + +G W+A+ F M+
Sbjct: 146 QVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLACKGRCWDALNAFRMMI 205
Query: 325 SLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLK 384
P+ T+ IL L + GK++H +++R G ++D+ I +L+DMYAK G
Sbjct: 206 DAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTETDIFIANSLIDMYAKSGHST 265
Query: 385 HARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACV 444
A + + ++VS NAM+ YA++ E I ++ +G P+ ++F + L AC
Sbjct: 266 EASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVTFTNVLPACA 325
Query: 445 HAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEA 487
G + G E + + L ++D+ ++ G L A
Sbjct: 326 RLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSA 368
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 133/292 (45%), Gaps = 10/292 (3%)
Query: 222 LMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQD 281
++R G++ TF VL C+D + KG E+H + LG +D +VG L+ +Y
Sbjct: 1 MVRRGVQLDDHTFPFVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGF 60
Query: 282 LVAAQMAFDE-----IENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVG 336
L A+ FDE + + ++G + +G YT F +L + P++ +V
Sbjct: 61 LNDARRLFDEMPERDVVSWNTIIGLLSVNG----DYTEARNYYFWMILRSVIKPNLVSVI 116
Query: 337 IILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTP 396
+L ++L E +++H Y+++ G DS V ALVD Y KCGS+K +
Sbjct: 117 SLLPISAALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEK 176
Query: 397 DLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFF 456
+ VS N+++ A G + + FR ++ +G +P+ ++ S L V K G E
Sbjct: 177 NEVSWNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIH 236
Query: 457 DLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLG 508
+ + ++D+ +++G EA + + V W A++
Sbjct: 237 GFSMRMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLD-RRNIVSWNAMIA 287
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 87/189 (46%), Gaps = 10/189 (5%)
Query: 331 DIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAY 390
D +T +L CS + +G +VH + G+D+DV++G L+ +Y CG L AR +
Sbjct: 9 DDHTFPFVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLF 68
Query: 391 KRISTPDLVSQNAMLTAYAMHGHGKEGIA-HFRRILASGFRPDHISFLSALSACVHAGSI 449
+ D+VS N ++ +++G E +F IL S +P+ +S +S L +
Sbjct: 69 DEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLP----ISAA 124
Query: 450 KTGSEFFDLMAYYDVKPSL--KHYTC--MVDLLSRAGELGEAYEFIKKIPMAPDSVMWGA 505
E + Y VK L + TC +VD + G + ++ + + + V W +
Sbjct: 125 LEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNE-TVEKNEVSWNS 183
Query: 506 LLGGCVSHG 514
++ G G
Sbjct: 184 IINGLACKG 192
>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 341 bits (874), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 196/598 (32%), Positives = 297/598 (49%), Gaps = 73/598 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGSL DA++VF + +R N+V
Sbjct: 140 MYAKCGSLTDARRVFDGIRDR------------------------------------NIV 163
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A+I F + EA M+ G +P+ T S+L A + L +G++ H I
Sbjct: 164 SWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEI 223
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G P V LV +Y +CGD+ A IF K KN V+ +I GY + G V A
Sbjct: 224 AKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVAL 283
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
EL ++M+ V P T+ S+L
Sbjct: 284 ELLEKMQQAEV------------------------------------APNKITYTSILQG 307
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C +L GK++H I G + +V AL+ MYC+ L A+ F ++ + + +
Sbjct: 308 CTTPLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTW 367
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G+ + A+ LF M + PD T L++CSS A ++ GK +H +
Sbjct: 368 TAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVH 427
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
GY DV++ +ALV MYAKCGS+ ARL + ++S ++V+ AM+T A HG +E + +
Sbjct: 428 AGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMITGCAQHGRCREALEY 487
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLS 479
F ++ G +PD ++F S LSAC H G ++ G + F M Y +KP ++HY+C VDLL
Sbjct: 488 FEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLG 547
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
RAG L EA I +P P +WGALL C H ++E G+ AA+ +++L+P++ G YV
Sbjct: 548 RAGHLEEAENVILTMPFQPGPSVWGALLSACRIHSDVERGERAAENVLKLDPDDDGAYVA 607
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
L+N++A AGR+ D + RQ M+ R + K PG SWIE ++H F D+SH ++EIY
Sbjct: 608 LSNIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIEVDGKVHVFHVEDKSHPEAKEIY 665
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 119/444 (26%), Positives = 207/444 (46%), Gaps = 37/444 (8%)
Query: 71 QNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPF 130
+ G +EA+G+L M +G + +L CARL+ L G+E H I ++G N +
Sbjct: 73 KQGRLKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRY 132
Query: 131 VVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLG 190
+ N L+ +Y +CG + A ++F +N VS
Sbjct: 133 LENTLLSMYAKCGSLTDARRVFDGIRDRNIVS---------------------------- 164
Query: 191 VQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKG 250
W +MI +V + EA+ + + + G +P TF S+L A + L+ G
Sbjct: 165 -------WTAMIEAFVAGNQNLEAYKCYETMKLA-GCKPDKVTFVSLLNAFTNPELLQVG 216
Query: 251 KEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPN 310
+++H GL+ + VG +LV MY + D+ AQ+ FD++ + + G+
Sbjct: 217 QKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQ 276
Query: 311 VYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIG 370
A++L +M ++ P+ T IL C++ +E GK+VH Y I+ GY ++ +
Sbjct: 277 GQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVV 336
Query: 371 TALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFR 430
AL+ MY KCG LK AR + + D+V+ AM+T YA G E I FRR+ G +
Sbjct: 337 NALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIK 396
Query: 431 PDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEF 490
PD ++F SAL++C ++ G + + + + +V + ++ G + +A
Sbjct: 397 PDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLV 456
Query: 491 IKKIPMAPDSVMWGALLGGCVSHG 514
++ + V W A++ GC HG
Sbjct: 457 FNQMS-ERNVVAWTAMITGCAQHG 479
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 100/198 (50%), Gaps = 3/198 (1%)
Query: 338 ILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPD 397
+L C+ L ++E+G++VHA ++ G + ++ L+ MYAKCGSL AR + I +
Sbjct: 102 LLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIRDRN 161
Query: 398 LVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFD 457
+VS AM+ A+ E + + +G +PD ++F+S L+A + ++ G +
Sbjct: 162 IVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHM 221
Query: 458 LMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
+A ++ + T +V + ++ G++ +A K+P + V W L+ G G ++
Sbjct: 222 EIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLP-EKNVVTWTLLIAGYAQQGQVD 280
Query: 518 FGQIAADRL--IELEPNN 533
+++ E+ PN
Sbjct: 281 VALELLEKMQQAEVAPNK 298
>gi|297740136|emb|CBI30318.3| unnamed protein product [Vitis vinifera]
Length = 861
Score = 341 bits (874), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 197/629 (31%), Positives = 320/629 (50%), Gaps = 101/629 (16%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC ++DA+ +F M ERD LV
Sbjct: 202 MYVKCREIEDARFLFDKMQERD------------------------------------LV 225
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+ +IGG+ + G E++ + +M+ EG+ P+ + +V+ ACA+L + + YI
Sbjct: 226 TWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYI 285
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R F + + ++D+Y +CG C V AR
Sbjct: 286 QRKKFQLDVILGTAMIDMYAKCG---------------------------C----VESAR 314
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
E+FD+ME ++ +ISW++MI+ Y + +A +FR +++ G+ P T S+L A
Sbjct: 315 EIFDRME----EKNVISWSAMIAAYGYHGQGRKALDLFR-MMLSSGMLPDKITLASLLYA 369
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFD---------- 290
C + +L + +++HA A G+ + V LV Y Y+ L A FD
Sbjct: 370 CINCRNLTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDGMCVRDSVSW 429
Query: 291 --------EIENIENLLGKMKE---DGFEPNVYTW-------NAMQLFSEMLSLDLTPDI 332
++ + N G +E G P+ YT ++ LF +M + PD
Sbjct: 430 SVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFCGNANESLVLFDKMREEGVVPDK 489
Query: 333 YTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKR 392
+ ++ AC+ L M + + + Y R + DV +GTA++DM+AKCG ++ AR + R
Sbjct: 490 VAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDR 549
Query: 393 ISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTG 452
+ +++S +AM+ AY HG G++ + F +L SG P+ I+ +S L AC HAG ++ G
Sbjct: 550 MEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEG 609
Query: 453 SEFFDLM-AYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCV 511
FF LM Y V+ +KHYTC+VDLL RAG L EA + I+ + + D +WGA LG C
Sbjct: 610 LRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACR 669
Query: 512 SHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGC 571
+H ++ + AA L+EL+P N G+Y++L+N++A AGRW D+A+TR M RR+ K PG
Sbjct: 670 THKDVVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGW 729
Query: 572 SWIEDRDEIHKFRASDRSHDRSEEIYTII 600
+WIE ++ H+F D +H RS+EIY ++
Sbjct: 730 TWIEVDNKSHQFSVGDTTHPRSKEIYEML 758
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 104/393 (26%), Positives = 189/393 (48%), Gaps = 36/393 (9%)
Query: 128 NP-FVVNGLVDVYRRCGDMLSALKIFSKFSI----KNEVSCNTIIVGYCENGNVAEAREL 182
NP F ++ LV+ C ++ ++ ++ S+ +N V N +I Y + +A L
Sbjct: 80 NPKFYISALVN----CRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGL 135
Query: 183 FDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACA 242
FD M R +SW+ M+ G+ Y F FR+L+ R G P ++T V+ AC
Sbjct: 136 FDGM----CVRDSVSWSVMVGGFAKVGDYINCFGTFRELI-RCGARPDNYTLPFVIRACR 190
Query: 243 DMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKM 302
D+ +L+ ALV+MY + +++ A+ FD+++ + + +
Sbjct: 191 DLKNLQM---------------------ALVDMYVKCREIEDARFLFDKMQERDLVTWTV 229
Query: 303 KEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCG 362
G+ ++ LF +M + PD + ++ AC+ L M + + + Y R
Sbjct: 230 MIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKK 289
Query: 363 YDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFR 422
+ DV +GTA++DMYAKCG ++ AR + R+ +++S +AM+ AY HG G++ + FR
Sbjct: 290 FQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFR 349
Query: 423 RILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAG 482
+L+SG PD I+ S L AC++ ++ + + + + +L +V S
Sbjct: 350 MMLSSGMLPDKITLASLLYACINCRNLTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYR 409
Query: 483 ELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
L +AY + + DSV W ++GG G+
Sbjct: 410 ALDDAYGLFDGMCVR-DSVSWSVMVGGFAKVGD 441
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 116/507 (22%), Positives = 198/507 (39%), Gaps = 98/507 (19%)
Query: 60 VSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
VSWS ++GGF + G G + G P+ TL V+ AC L+ L +
Sbjct: 145 VSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQM------- 197
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
LVD+Y +C ++ A +F K ++ V+ +I GY E G E+
Sbjct: 198 --------------ALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANES 243
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
LF++M +G+ P +V+
Sbjct: 244 LVLFEKMRE------------------------------------EGVVPDKVAMVTVVF 267
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
ACA + ++ K + I Q D +G A+++MY + + +A+ FD +E
Sbjct: 268 ACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRME------ 321
Query: 300 GKMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSSL 345
E NV +W+AM LF MLS + PD T+ +L AC +
Sbjct: 322 --------EKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACINC 373
Query: 346 ATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAML 405
+ + +QVHA A G ++ + LV Y+ +L A + + D VS + M+
Sbjct: 374 RNLTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDGMCVRDSVSWSVMV 433
Query: 406 TAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVK 465
+A G FR ++ G RPD+ + L C G+ FD M V
Sbjct: 434 GGFAKVGDYMNCFGTFRELIRCGARPDNYT----LPFC---GNANESLVLFDKMREEGVV 486
Query: 466 PSLKHYTCMVDLLSRAGELGEAY---EFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIA 522
P +V ++ G + +A ++I++ D ++ A++ G +E +
Sbjct: 487 PDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREI 546
Query: 523 ADRLIELEPNNTGNYVMLANLFAYAGR 549
DR +E N ++ + + Y G+
Sbjct: 547 FDR---MEEKNVISWSAMIAAYGYHGQ 570
>gi|222612904|gb|EEE51036.1| hypothetical protein OsJ_31684 [Oryza sativa Japonica Group]
Length = 637
Score = 340 bits (873), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 183/513 (35%), Positives = 274/513 (53%), Gaps = 36/513 (7%)
Query: 85 MQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGD 144
+ A L R S++ ACAR + L + H ++ + F + F+ N L+ +Y +C
Sbjct: 55 VDARELAATPRLYHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKC-- 112
Query: 145 MLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISG 204
G VA+AR +FD M R + SW S+I+G
Sbjct: 113 -----------------------------GAVADARRVFDGMP----ARDMCSWTSLIAG 139
Query: 205 YVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQS 264
Y N + DEA + +L R +P FTF S+L A S G++IHAL +
Sbjct: 140 YAQNDMPDEALGLLPGML-RGRFKPNGFTFASLLKAAGASASSGIGEQIHALTVKYDWHD 198
Query: 265 DTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEML 324
D +VG AL++MY R + A FD++E+ + GF + +F+EM
Sbjct: 199 DVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQ 258
Query: 325 SLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLK 384
+T + SA + + +E+GK VHA+ I+ G +G ++DMYAK GS+
Sbjct: 259 RNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMI 318
Query: 385 HARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACV 444
AR + R+ D+V+ N+MLTA+A +G G+E + HF + G + I+FLS L+AC
Sbjct: 319 DARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACS 378
Query: 445 HAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWG 504
H G +K G ++FD+M Y+++P + HY +VDLL RAG L +A FI K+PM P + +WG
Sbjct: 379 HGGLVKEGKQYFDMMKEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWG 438
Query: 505 ALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRR 564
ALLG C H N + GQ AAD + EL+P++TG V+L N++A G+W AR R+ MK
Sbjct: 439 ALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQWDAAARVRKMMKATG 498
Query: 565 MHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
+ K P CSW+E + +H F A+D +H RSEEIY
Sbjct: 499 VKKEPACSWVEIENSVHMFVANDDTHPRSEEIY 531
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 103/418 (24%), Positives = 173/418 (41%), Gaps = 73/418 (17%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KCG++ DA++VF MP RD +
Sbjct: 108 LYCKCGAVADARRVFDGMPARD------------------------------------MC 131
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+++I G+ QN +EA+G+L M +PN T +S+L A +G++ H
Sbjct: 132 SWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHALT 191
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ + + +V + L+D+Y RCG M A+ +F + KN VS N +I G+ G+
Sbjct: 192 VKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTL 251
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+F +M+ R+G E T FT+ SV A
Sbjct: 252 LMFAEMQ------------------------------------RNGFEATHFTYSSVFSA 275
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
A + +L +GK +HA I G + FVG +++MY + ++ A+ FD ++ + +
Sbjct: 276 IAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTW 335
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
F A+ F EM + + T IL+ACS ++ GKQ
Sbjct: 336 NSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKE 395
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARL-AYKRISTPDLVSQNAMLTAYAMHGHGKEG 417
+ ++ +VD+ + G L A + +K P A+L + MH + K G
Sbjct: 396 YNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALLGSCRMHKNAKIG 453
>gi|147771902|emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]
Length = 708
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 185/524 (35%), Positives = 294/524 (56%), Gaps = 40/524 (7%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
+++SW+++I G+ + G ++ + ++M A G+EPNA TLS+V+ AC+ L L LG+ FH
Sbjct: 184 DVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLGRIFH 243
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
G + GF SN + + L+D++ R N +
Sbjct: 244 GVVLGRGFDSNYVIASALIDMHGR-------------------------------NCALD 272
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
+AR+LFD++ ++ I W S+IS N +DEA F + G+ P FTFG+V
Sbjct: 273 DARQLFDEL----LEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTV 328
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
L AC ++ L++GKE+HA I G + V +LV+MY + + +Q FD + +
Sbjct: 329 LTACGNLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRMPIKNS 388
Query: 298 LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAY 357
+ G+ N + +Q+F +M +DL Y G IL C+ LA + +GK+VH
Sbjct: 389 VSWSALLGGYCQNGDFKSVIQIFRKMEKVDL----YCFGTILRTCAGLAAVRQGKEVHCQ 444
Query: 358 AIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEG 417
IR G DV + +ALVD+YAKCG +++A+ + ++ +L++ N+M+ +A +G G+E
Sbjct: 445 YIRKGGWRDVIVESALVDLYAKCGCIEYAQTIFDQMPVRNLITWNSMIGGFAQNGRGEEA 504
Query: 418 IAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVD 476
+ F +++ G +PD+ISF+ L AC H G + G E+F M Y +K ++HY+CMVD
Sbjct: 505 LRIFNQMVKEGIKPDYISFIGILFACSHRGLVDEGREYFISMTKDYGIKVGIEHYSCMVD 564
Query: 477 LLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGN 536
LL RAG L EA I+ DS +W ALLG C + N E + A R++ELEP+ +
Sbjct: 565 LLGRAGLLEEAEILIETSDFRDDSSLWAALLGACTTCTNYEIAERIAKRVMELEPDYHLS 624
Query: 537 YVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEI 580
YV+LAN++ GRW+D R R+ MKDR ++K PG SWIE ++ +
Sbjct: 625 YVLLANVYKAVGRWNDALRIRRLMKDRGVNKMPGKSWIETKNNL 668
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 109/425 (25%), Positives = 201/425 (47%), Gaps = 49/425 (11%)
Query: 98 SSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSI 157
+S+L C ++ + G + H ++ ++G + FV N L+ +Y + G
Sbjct: 122 ASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTLYFKLGT------------- 168
Query: 158 KNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSM 217
+ E R++FD + + +ISW SMISGYV + +
Sbjct: 169 -----------------DFPETRKVFDGL----FVKDVISWTSMISGYVRVGKPMNSLEL 207
Query: 218 FRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYC 277
F +L G+EP +FT +V+ AC+++ L+ G+ H + + G S+ + AL++M+
Sbjct: 208 FWKMLAY-GVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHG 266
Query: 278 RYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEML-SLDLTPDIYTVG 336
R L A+ FDE+ + + N + A++ F M + PD +T G
Sbjct: 267 RNCALDDARQLFDELLEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFG 326
Query: 337 IILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTP 396
+L+AC +L +++GK+VHA I G+ +V + ++LVDMY KCGS+ ++ + R+
Sbjct: 327 TVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRMPIK 386
Query: 397 DLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSE-- 454
+ VS +A+L Y +G K I FR++ + D F + L C +++ G E
Sbjct: 387 NSVSWSALLGGYCQNGDFKSVIQIFRKME----KVDLYCFGTILRTCAGLAAVRQGKEVH 442
Query: 455 --FFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVS 512
+ + DV + +VDL ++ G + A ++P+ + + W +++GG
Sbjct: 443 CQYIRKGGWRDVIVE----SALVDLYAKCGCIEYAQTIFDQMPVR-NLITWNSMIGGFAQ 497
Query: 513 HGNLE 517
+G E
Sbjct: 498 NGRGE 502
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 116/480 (24%), Positives = 196/480 (40%), Gaps = 121/480 (25%)
Query: 1 MYGKCGS-LDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNL 59
+Y K G+ + +KVF + +D +SW S+++ G + +LE +M + E PN
Sbjct: 162 LYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVE-PNA 220
Query: 60 VSWSAVIGGFTQ----------------NGYDEEAI--GMLFRMQA-------------E 88
+ SAVI ++ G+D + L M E
Sbjct: 221 FTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDE 280
Query: 89 GLEPNARTLSSV------------------------------------LPACARLQKLSL 112
LEP+A +S+ L AC L +L
Sbjct: 281 LLEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQ 340
Query: 113 GKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCE 172
GKE H + GF N V + LVD+Y +CG + + +IF + IKN VS + ++ GYC+
Sbjct: 341 GKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQ 400
Query: 173 NGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSF 232
NG+ ++F +ME + + +
Sbjct: 401 NGDFKSVIQIFRKMEKVDL----------------------------------------Y 420
Query: 233 TFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI 292
FG++L CA + ++R+GKE+H I G D V ALV++Y + + AQ FD++
Sbjct: 421 CFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQTIFDQM 480
Query: 293 ENIENLLG-KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG 351
+ NL+ GF N A+++F++M+ + PD + IL ACS ++ G
Sbjct: 481 P-VRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFIGILFACSHRGLVDEG 539
Query: 352 KQVHAYAIRCGYDSDVHIG----TALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTA 407
++ Y I D + +G + +VD+ + G L+ A + I T D +++ A
Sbjct: 540 RE---YFISMTKDYGIKVGIEHYSCMVDLLGRAGLLEEAEIL---IETSDFRDDSSLWAA 593
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 144/293 (49%), Gaps = 3/293 (1%)
Query: 227 IEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRY-QDLVAA 285
I + S+L C + + G +IHA I GL+ D FVG +L+ +Y + D
Sbjct: 114 ISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTLYFKLGTDFPET 173
Query: 286 QMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSL 345
+ FD + + + G+ N+++LF +ML+ + P+ +T+ ++ ACS L
Sbjct: 174 RKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAFTLSAVIKACSEL 233
Query: 346 ATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAML 405
++ G+ H + G+DS+ I +AL+DM+ + +L AR + + PD + +++
Sbjct: 234 GDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDELLEPDAICWTSII 293
Query: 406 TAYAMHGHGKEGIAHFRRILAS-GFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDV 464
+A + E + F + G PD +F + L+AC + G +K G E +
Sbjct: 294 SALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGF 353
Query: 465 KPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
++ + +VD+ + G +GE+ ++P+ +SV W ALLGG +G+ +
Sbjct: 354 CGNVVVESSLVDMYGKCGSVGESQRIFDRMPIK-NSVSWSALLGGYCQNGDFK 405
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 119/294 (40%), Gaps = 40/294 (13%)
Query: 316 AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVD 375
A+QL + +++ +L C+ + G Q+HA+ I+ G + D +G +L+
Sbjct: 102 ALQLLKSIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLT 161
Query: 376 MYAKCGS-LKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHI 434
+Y K G+ R + + D++S +M++ Y G + F ++LA G P+
Sbjct: 162 LYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAF 221
Query: 435 SFLSALSACVHAGSIKTGSEFF-----------------------------DLMAYYD-- 463
+ + + AC G +K G F D +D
Sbjct: 222 TLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDEL 281
Query: 464 VKPSLKHYTCMVDLLSRAGELGEAYEFIKKIP----MAPDSVMWGALLGGCVSHGNLEFG 519
++P +T ++ L+R EA F + M PD +G +L C + G L+ G
Sbjct: 282 LEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQG 341
Query: 520 QIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSW 573
+ ++I GN V+ ++L G+ + + Q++ D RM SW
Sbjct: 342 KEVHAKVI--TTGFCGNVVVESSLVDMYGKCGSVGES-QRIFD-RMPIKNSVSW 391
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 104/243 (42%), Gaps = 65/243 (26%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWN-------------------------------SV 29
MYGKCGS+ +++++F MP ++ VSW+ ++
Sbjct: 366 MYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFRKMEKVDLYCFGTI 425
Query: 30 VTACAANGLVLEALE----------------------------CLERMSSLDNETP--NL 59
+ CA V + E C+E ++ ++ P NL
Sbjct: 426 LRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQTIFDQMPVRNL 485
Query: 60 VSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
++W+++IGGF QNG EEA+ + +M EG++P+ + +L AC+ + G+E+
Sbjct: 486 ITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFIGILFACSHRGLVDEGREYFIS 545
Query: 120 ITRN-GFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVG---YCENGN 175
+T++ G + +VD+ R G + A + +++ S ++G C N
Sbjct: 546 MTKDYGIKVGIEHYSCMVDLLGRAGLLEEAEILIETSDFRDDSSLWAALLGACTTCTNYE 605
Query: 176 VAE 178
+AE
Sbjct: 606 IAE 608
>gi|359487704|ref|XP_002276220.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 585
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 193/522 (36%), Positives = 283/522 (54%), Gaps = 48/522 (9%)
Query: 85 MQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGD 144
M+ G PN T SS+L A A + G++ H I ++GF +N FV LVD+Y +C D
Sbjct: 1 MRCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCAD 60
Query: 145 MLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISG 204
M SA+++F DQM +R ++SWNSMI G
Sbjct: 61 MHSAVRVF-------------------------------DQMP----ERNLVSWNSMIVG 85
Query: 205 YVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQS 264
+ N+LYD A +F+D+L + P + SVL ACA+M L G+++H + + GL
Sbjct: 86 FFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKFGLVP 145
Query: 265 DTFVGGALVEMY--CRYQD--LVAAQMAFDEIENIENLL--GKMKEDGFEPNVYTWNAMQ 318
T+V +L++MY CR+ D + Q D N+L G ++ D FE A
Sbjct: 146 LTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFE------EACN 199
Query: 319 LFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYA 378
F M + PD + +L + +SLA + +G +H I+ GY ++ I +L+ MYA
Sbjct: 200 YFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYA 259
Query: 379 KCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLS 438
KCGSL A ++ I +++S AM++AY +HG + I F +L+ G P H++F+
Sbjct: 260 KCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVC 319
Query: 439 ALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMA 497
LSAC H G ++ G F+ M +D+ P +HY CMVDLL RAG L EA FI+ +PM
Sbjct: 320 VLSACSHTGRVEEGLAHFNSMKKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMK 379
Query: 498 PDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTR 557
P +WGALLG C +GNL+ G+ AA+RL E+EP N GNYV+LAN+ +GR + R
Sbjct: 380 PTPSVWGALLGACRKYGNLKMGREAAERLFEMEPYNPGNYVLLANMCTRSGRLEEANEVR 439
Query: 558 QKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTI 599
+ M + K PGCSWI+ ++ F A DRSH S+EIY +
Sbjct: 440 RLMGVNGVRKEPGCSWIDVKNMTFVFTAHDRSHSSSDEIYKM 481
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 123/494 (24%), Positives = 204/494 (41%), Gaps = 128/494 (25%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC + A +VF MPER+ VSWNS+
Sbjct: 54 MYAKCADMHSAVRVFDQMPERNLVSWNSM------------------------------- 82
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFR--MQAEGLEPNARTLSSVLPACARLQKLSLGKEFHG 118
++G F N YD A+G +F+ ++ + + PN ++SSVL ACA + L+ G++ HG
Sbjct: 83 ----IVGFFHNNLYD-RAVG-VFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHG 136
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
+ + G + +V+N L+D+Y +C +K+F ++ V+ N +++G+ +N E
Sbjct: 137 VVVKFGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEE 196
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
A F W ++ R+GI P +F +VL
Sbjct: 197 ACNYF--------------W----------------------VMRREGILPDEASFSTVL 220
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
+ A + +L +G IH I LG + + G+L+ MY + LV A F+ IE
Sbjct: 221 HSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIE----- 275
Query: 299 LGKMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSS 344
+ NV +W AM +LF MLS + P T +LSACS
Sbjct: 276 ---------DHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSH 326
Query: 345 LATMERG-------KQVHAYAIRCGYDSDVHIG----TALVDMYAKCGSLKHARLAYKRI 393
+E G K++H D++ G +VD+ + G L A+ + +
Sbjct: 327 TGRVEEGLAHFNSMKKIH----------DMNPGPEHYACMVDLLGRAGWLDEAKRFIESM 376
Query: 394 S-TPDLVSQNAMLTAYAMHGHGKEGIAHFRRILA-SGFRPDHISFLSALSACVHAGSIKT 451
P A+L A +G+ K G R+ + P + L+ + C +G ++
Sbjct: 377 PMKPTPSVWGALLGACRKYGNLKMGREAAERLFEMEPYNPGNYVLLANM--CTRSGRLEE 434
Query: 452 GSEFFDLMAYYDVK 465
+E LM V+
Sbjct: 435 ANEVRRLMGVNGVR 448
>gi|413918610|gb|AFW58542.1| hypothetical protein ZEAMMB73_242801 [Zea mays]
Length = 941
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 193/598 (32%), Positives = 307/598 (51%), Gaps = 74/598 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G +D A +VF + E+D +SWNS+ L C
Sbjct: 310 MYAKYGRVDSALRVFGQIAEKDYISWNSM-------------LSC--------------- 341
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+ QN + EAI M G +P+ + S+ A L +L+ G+EFH Y
Sbjct: 342 --------YVQNSFYAEAIDFFGEMLQHGFQPDHACVVSLSSALGHLSRLNNGREFHAYA 393
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ ++ V N L+D+Y +CG + + K+F I++
Sbjct: 394 IKQRLHTDLQVGNTLMDMYIKCGSIECSAKVFESMGIRDH-------------------- 433
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
ISW ++++ + +S + EA M +L ++GI S GS+L
Sbjct: 434 ---------------ISWTTILACFAQSSRHSEALEMILEL-QKEGIMVDSMMIGSILET 477
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C + S+ K++H AI GL D + L+++Y + + F +E + +
Sbjct: 478 CCGLKSISLLKQVHCYAIRNGLL-DLILENRLIDIYGECGEFDHSLNLFQRVEKKDIVSW 536
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
+ N A+ LF+EM ++ PD + IL A + L+++ +GKQVH + IR
Sbjct: 537 TSMINCCTNNGRLNGAVFLFTEMQKANIQPDSVALVSILVAIAGLSSLTKGKQVHGFLIR 596
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
+ + + ++LVDMY+ CGS+ +A ++R D+V AM+ A MHGHGK+ I
Sbjct: 597 RNFPIEGPVVSSLVDMYSGCGSMNYAIRVFERAKCKDVVLWTAMINATGMHGHGKQAIDL 656
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMVDLLS 479
F+R+L +G PDH+SFL+ L AC H+ ++ G + D+M + Y +KP +HY C+VD+L
Sbjct: 657 FKRMLQTGLTPDHVSFLALLYACSHSKLVEEGKHYLDIMVSKYRLKPWQEHYACVVDILG 716
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
R+G+ EAYEFIK +PM P S +W ALLG C H N +AA++L+ELEP+N GNY++
Sbjct: 717 RSGQTEEAYEFIKTMPMDPKSAVWCALLGACRVHRNYGLAVVAANKLLELEPDNPGNYIL 776
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
++N+FA G+W++ TR +M +R + K+P CSWIE + IH F + D H SE I+
Sbjct: 777 VSNVFAEMGKWNNAKETRTRMAERGLRKNPACSWIEIGNNIHTFTSGDYCHRDSEAIH 834
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 133/522 (25%), Positives = 215/522 (41%), Gaps = 82/522 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYG+CG +DDA+++F MP R SWN
Sbjct: 104 MYGRCGRVDDARRLFNGMPARTVFSWN--------------------------------- 130
Query: 61 SWSAVIGGFTQNGYDEEAI---GMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
A++G + +G EA+ G + A G P+ TL+SVL AC G E H
Sbjct: 131 ---ALVGAYLSSGSAGEAMRVYGAMRASAAPGSAPDGCTLASVLKACGAEGDGRCGGEVH 187
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
G + G + V N L+ +Y +CG + SAL++F
Sbjct: 188 GLAVKVGLDKSTLVANALIGMYAKCGLLDSALRVF------------------------- 222
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
E Q R + SWNS++SG V N EA ++FR + G S+T +V
Sbjct: 223 ---EWLQQ-----DARDVASWNSVVSGCVQNGRTLEALALFRGM-QSAGFPMNSYTSVAV 273
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
L CA++ L G+E+HA + G + + LV MY +Y + +A F +I +
Sbjct: 274 LQVCAELGLLSLGRELHAALLKCGSELNIQCNALLV-MYAKYGRVDSALRVFGQIAEKDY 332
Query: 298 LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAY 357
+ + N + A+ F EML PD V + SA L+ + G++ HAY
Sbjct: 333 ISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQPDHACVVSLSSALGHLSRLNNGREFHAY 392
Query: 358 AIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEG 417
AI+ +D+ +G L+DMY KCGS++ + ++ + D +S +L +A E
Sbjct: 393 AIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVFESMGIRDHISWTTILACFAQSSRHSEA 452
Query: 418 IAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTC---M 474
+ + G D + S L C SI + Y ++ L +
Sbjct: 453 LEMILELQKEGIMVDSMMIGSILETCCGLKSIS----LLKQVHCYAIRNGLLDLILENRL 508
Query: 475 VDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNL 516
+D+ GE + +++ D V W +++ C ++G L
Sbjct: 509 IDIYGECGEFDHSLNLFQRVE-KKDIVSWTSMINCCTNNGRL 549
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 81/186 (43%), Gaps = 7/186 (3%)
Query: 336 GIILSACSSLATMERGKQVHAYAIRCGY---DSDVHIGTALVDMYAKCGSLKHARLAYKR 392
G +L ++ G+QVHA+A+ G D D + T LV MY +CG + AR +
Sbjct: 61 GWVLDLVAARRAAAEGRQVHAHAVTTGSLNEDDDGFLATKLVFMYGRCGRVDDARRLFNG 120
Query: 393 ISTPDLVSQNAMLTAYAMHGHGKEGIAHF---RRILASGFRPDHISFLSALSACVHAGSI 449
+ + S NA++ AY G E + + R A G PD + S L AC G
Sbjct: 121 MPARTVFSWNALVGAYLSSGSAGEAMRVYGAMRASAAPGSAPDGCTLASVLKACGAEGDG 180
Query: 450 KTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPM-APDSVMWGALLG 508
+ G E L + S ++ + ++ G L A + + A D W +++
Sbjct: 181 RCGGEVHGLAVKVGLDKSTLVANALIGMYAKCGLLDSALRVFEWLQQDARDVASWNSVVS 240
Query: 509 GCVSHG 514
GCV +G
Sbjct: 241 GCVQNG 246
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 107/250 (42%), Gaps = 19/250 (7%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY CGS++ A +VF+ +D V W +++ A +G +A++ +RM TP+ V
Sbjct: 612 MYSGCGSMNYAIRVFERAKCKDVVLWTAMINATGMHGHGKQAIDLFKRMLQ-TGLTPDHV 670
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
S+ A++ + + EE L M ++ L+P + V+ R + EF
Sbjct: 671 SFLALLYACSHSKLVEEGKHYLDIMVSKYRLKPWQEHYACVVDILGRSGQTEEAYEFIKT 730
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVG--YCENGNVA 177
+ + + + G V+R G L+ + ++ + N I+V + E G
Sbjct: 731 MPMDPKSAVWCALLGACRVHRNYG--LAVVAANKLLELEPDNPGNYILVSNVFAEMGKWN 788
Query: 178 EARELFDQMEHLGVQRG-IISW-------NSMISG---YVDNSLYDEAFSMFRDLLMRDG 226
A+E +M G+++ SW ++ SG + D+ S ++L R+G
Sbjct: 789 NAKETRTRMAERGLRKNPACSWIEIGNNIHTFTSGDYCHRDSEAIHLKLSEITEMLRREG 848
Query: 227 --IEPTSFTF 234
+E T F
Sbjct: 849 GYVEDTRFVL 858
>gi|242050732|ref|XP_002463110.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
gi|241926487|gb|EER99631.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
Length = 802
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 203/644 (31%), Positives = 344/644 (53%), Gaps = 54/644 (8%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDC-VSWNSVVTACAANGLVLEALECLERMSSLDNETPNL 59
+Y G L A +F+ P C V+ S+V A AA G + A+ + + +T
Sbjct: 68 LYTLSGDLPAAATLFRADP---CPVAATSLVAAYAAAGRLPAAVSFFDAVPQARRDT--- 121
Query: 60 VSWSAVIGGFTQNGYDEEAIGMLFRMQAEG-LEPNARTLSSVLPACARLQKLSLGK--EF 116
V +AVI + + + A+ + + A G L P+ + +++L A L +S+ +
Sbjct: 122 VLHNAVISAYARASHAAPAVAVFRSLLASGSLRPDDYSFTALLSAAGHLPNISVRHCAQL 181
Query: 117 HGYITRNGFMSNPFVVNGLVDVYRRCGDMLS---ALKIFSKFSIKNEVSCNTIIVGYCEN 173
+ ++G V N LV +Y +C + + A K+ + K+ ++ T++VGY
Sbjct: 182 QCSVLKSGAGGVLSVSNALVALYMKCEALEATRDARKVLDEMPDKDALTWTTMVVGYVRR 241
Query: 174 GNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFT 233
G+V AR +F++++ V+ ++ WN+MISGYV + + EAF +FR +++ + + FT
Sbjct: 242 GDVGAARSVFEEVD---VKFDVV-WNAMISGYVHSGMVVEAFELFRRMVL-ERVPLDEFT 296
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALGL----QSDTFVGGALVEMYCRYQDLVAAQMAF 289
F SVL ACA+ GK +H L ++ V ALV +Y + ++ A+ F
Sbjct: 297 FTSVLSACANAGFFAHGKSVHGQITRLQPNFVPEAALPVNNALVTLYSKCGNIAVARRIF 356
Query: 290 DEIENIE--------------NLLGKMKE-----------------DGFEPNVYTWNAMQ 318
D +++ + + L K E G+ ++ +A++
Sbjct: 357 DNMKSKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFSEDALK 416
Query: 319 LFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYA 378
LF+ M + D+ P YT +SAC L +++ GKQ+H + ++ G++ G AL+ MYA
Sbjct: 417 LFNRMRAEDVKPCDYTYAGAISACGELGSLKHGKQLHGHLVQLGFEGSNSAGNALITMYA 476
Query: 379 KCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLS 438
+CG++K A L + + D VS NAM++A HGHG+E + F R++A G PD ISFL+
Sbjct: 477 RCGAVKEANLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLT 536
Query: 439 ALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMA 497
L+AC H+G + G ++F+ M + + P HYT ++DLL RAG +GEA + IK +P
Sbjct: 537 VLTACNHSGLVDEGFQYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFE 596
Query: 498 PDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTR 557
P +W A+L GC + G++E G AAD+L ++ P + G Y++L+N ++ AGRW D AR R
Sbjct: 597 PTPSIWEAILSGCRTSGDMELGAHAADQLFKMTPQHDGTYILLSNTYSAAGRWVDAARVR 656
Query: 558 QKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
+ M+DR + K PGCSWIE +++H F D H + ++Y ++
Sbjct: 657 KLMRDRGVKKEPGCSWIEAGNKVHVFVVGDTKHPEAHKVYKFLE 700
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 105/459 (22%), Positives = 188/459 (40%), Gaps = 76/459 (16%)
Query: 128 NPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQME 187
+P + L+ +Y GD+ +A +F + V+ +++ Y G + A FD +
Sbjct: 58 HPHLTLRLIHLYTLSGDLPAAATLFR--ADPCPVAATSLVAAYAAAGRLPAAVSFFDAVP 115
Query: 188 HLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMN-- 245
+R + N++IS Y S A ++FR LL + P ++F ++L A +
Sbjct: 116 Q--ARRDTVLHNAVISAYARASHAAPAVAVFRSLLASGSLRPDDYSFTALLSAAGHLPNI 173
Query: 246 SLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVA---AQMAFDEIENIENL---- 298
S+R ++ + G V ALV +Y + + L A A+ DE+ + + L
Sbjct: 174 SVRHCAQLQCSVLKSGAGGVLSVSNALVALYMKCEALEATRDARKVLDEMPDKDALTWTT 233
Query: 299 ----------LGKMKEDGFEPNV---YTWNAM--------------QLFSEMLSLDLTPD 331
+G + E +V WNAM +LF M+ + D
Sbjct: 234 MVVGYVRRGDVGAARSVFEEVDVKFDVVWNAMISGYVHSGMVVEAFELFRRMVLERVPLD 293
Query: 332 IYTVGIILSACSSLATMERGKQVHAYAIRCG----YDSDVHIGTALVDMYAKCGSLKHAR 387
+T +LSAC++ GK VH R ++ + + ALV +Y+KCG++ AR
Sbjct: 294 EFTFTSVLSACANAGFFAHGKSVHGQITRLQPNFVPEAALPVNNALVTLYSKCGNIAVAR 353
Query: 388 LAYKRISTPDLVSQNAMLTAYA------------------------------MH-GHGKE 416
+ + + D+VS N +L+ Y +H G ++
Sbjct: 354 RIFDNMKSKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFSED 413
Query: 417 GIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVD 476
+ F R+ A +P ++ A+SAC GS+K G + + + S ++
Sbjct: 414 ALKLFNRMRAEDVKPCDYTYAGAISACGELGSLKHGKQLHGHLVQLGFEGSNSAGNALIT 473
Query: 477 LLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
+ +R G + EA +P DSV W A++ HG+
Sbjct: 474 MYARCGAVKEANLMFLVMPNI-DSVSWNAMISALGQHGH 511
>gi|225447243|ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Vitis vinifera]
Length = 633
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 185/524 (35%), Positives = 294/524 (56%), Gaps = 40/524 (7%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
+++SW+++I G+ + G ++ + ++M A G+EPNA TLS+V+ AC+ L L LG+ FH
Sbjct: 125 DVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLGRIFH 184
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
G + GF SN + + L+D++ R N +
Sbjct: 185 GVVLGRGFDSNYVIASALIDMHGR-------------------------------NCALD 213
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
+AR+LFD++ ++ I W S+IS N +DEA F + G+ P FTFG+V
Sbjct: 214 DARQLFDEL----LEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTV 269
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
L AC ++ L++GKE+HA I G + V +LV+MY + + +Q FD + +
Sbjct: 270 LTACGNLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRMPIKNS 329
Query: 298 LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAY 357
+ G+ N + +Q+F +M +DL Y G IL C+ LA + +GK+VH
Sbjct: 330 VSWSALLGGYCQNGDFKSVIQIFRKMEKVDL----YCFGTILRTCAGLAAVRQGKEVHCQ 385
Query: 358 AIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEG 417
IR G DV + +ALVD+YAKCG +++A+ + ++ +L++ N+M+ +A +G G+E
Sbjct: 386 YIRKGGWRDVIVESALVDLYAKCGCIEYAQTIFDQMPVRNLITWNSMIGGFAQNGRGEEA 445
Query: 418 IAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVD 476
+ F +++ G +PD+ISF+ L AC H G + G E+F M Y +K ++HY+CMVD
Sbjct: 446 LRIFNQMVKEGIKPDYISFIGILFACSHRGLVDEGREYFISMTKDYGIKVGIEHYSCMVD 505
Query: 477 LLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGN 536
LL RAG L EA I+ DS +W ALLG C + N E + A R++ELEP+ +
Sbjct: 506 LLGRAGLLEEAEILIETSDFRDDSSLWAALLGACTTCTNYEIAERIAKRVMELEPDYHLS 565
Query: 537 YVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEI 580
YV+LAN++ GRW+D R R+ MKDR ++K PG SWIE ++ +
Sbjct: 566 YVLLANVYKAVGRWNDALRIRRLMKDRGVNKMPGKSWIETKNNL 609
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 109/425 (25%), Positives = 201/425 (47%), Gaps = 49/425 (11%)
Query: 98 SSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSI 157
+S+L C ++ + G + H ++ ++G + FV N L+ +Y + G
Sbjct: 63 ASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTLYFKLGT------------- 109
Query: 158 KNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSM 217
+ E R++FD + + +ISW SMISGYV + +
Sbjct: 110 -----------------DFPETRKVFDGL----FVKDVISWTSMISGYVRVGKPMNSLEL 148
Query: 218 FRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYC 277
F +L G+EP +FT +V+ AC+++ L+ G+ H + + G S+ + AL++M+
Sbjct: 149 FWKMLAY-GVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHG 207
Query: 278 RYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEML-SLDLTPDIYTVG 336
R L A+ FDE+ + + N + A++ F M + PD +T G
Sbjct: 208 RNCALDDARQLFDELLEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFG 267
Query: 337 IILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTP 396
+L+AC +L +++GK+VHA I G+ +V + ++LVDMY KCGS+ ++ + R+
Sbjct: 268 TVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRMPIK 327
Query: 397 DLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSE-- 454
+ VS +A+L Y +G K I FR++ + D F + L C +++ G E
Sbjct: 328 NSVSWSALLGGYCQNGDFKSVIQIFRKME----KVDLYCFGTILRTCAGLAAVRQGKEVH 383
Query: 455 --FFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVS 512
+ + DV + +VDL ++ G + A ++P+ + + W +++GG
Sbjct: 384 CQYIRKGGWRDVIVE----SALVDLYAKCGCIEYAQTIFDQMPVR-NLITWNSMIGGFAQ 438
Query: 513 HGNLE 517
+G E
Sbjct: 439 NGRGE 443
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 117/480 (24%), Positives = 195/480 (40%), Gaps = 121/480 (25%)
Query: 1 MYGKCGS-LDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNL 59
+Y K G+ + +KVF + +D +SW S+++ G + +LE +M + E PN
Sbjct: 103 LYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVE-PNA 161
Query: 60 VSWSAVI----------------GGFTQNGYDEEAI--GMLFRMQA-------------E 88
+ SAVI G G+D + L M E
Sbjct: 162 FTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDE 221
Query: 89 GLEPNARTLSSV------------------------------------LPACARLQKLSL 112
LEP+A +S+ L AC L +L
Sbjct: 222 LLEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQ 281
Query: 113 GKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCE 172
GKE H + GF N V + LVD+Y +CG + + +IF + IKN VS + ++ GYC+
Sbjct: 282 GKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQ 341
Query: 173 NGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSF 232
NG+ ++F +ME + + +
Sbjct: 342 NGDFKSVIQIFRKMEKVDL----------------------------------------Y 361
Query: 233 TFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI 292
FG++L CA + ++R+GKE+H I G D V ALV++Y + + AQ FD++
Sbjct: 362 CFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQTIFDQM 421
Query: 293 ENIENLLG-KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG 351
+ NL+ GF N A+++F++M+ + PD + IL ACS ++ G
Sbjct: 422 P-VRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFIGILFACSHRGLVDEG 480
Query: 352 KQVHAYAIRCGYDSDVHIG----TALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTA 407
++ Y I D + +G + +VD+ + G L+ A + I T D +++ A
Sbjct: 481 RE---YFISMTKDYGIKVGIEHYSCMVDLLGRAGLLEEAEIL---IETSDFRDDSSLWAA 534
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 144/293 (49%), Gaps = 3/293 (1%)
Query: 227 IEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRY-QDLVAA 285
I + S+L C + + G +IHA I GL+ D FVG +L+ +Y + D
Sbjct: 55 ISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTLYFKLGTDFPET 114
Query: 286 QMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSL 345
+ FD + + + G+ N+++LF +ML+ + P+ +T+ ++ ACS L
Sbjct: 115 RKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAFTLSAVIKACSEL 174
Query: 346 ATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAML 405
++ G+ H + G+DS+ I +AL+DM+ + +L AR + + PD + +++
Sbjct: 175 GDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDELLEPDAICWTSII 234
Query: 406 TAYAMHGHGKEGIAHFRRILAS-GFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDV 464
+A + E + F + G PD +F + L+AC + G +K G E +
Sbjct: 235 SALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGF 294
Query: 465 KPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
++ + +VD+ + G +GE+ ++P+ +SV W ALLGG +G+ +
Sbjct: 295 CGNVVVESSLVDMYGKCGSVGESQRIFDRMPI-KNSVSWSALLGGYCQNGDFK 346
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 119/294 (40%), Gaps = 40/294 (13%)
Query: 316 AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVD 375
A+QL + +++ +L C+ + G Q+HA+ I+ G + D +G +L+
Sbjct: 43 ALQLLKSIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLT 102
Query: 376 MYAKCGS-LKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHI 434
+Y K G+ R + + D++S +M++ Y G + F ++LA G P+
Sbjct: 103 LYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAF 162
Query: 435 SFLSALSACVHAGSIKTGSEFF-----------------------------DLMAYYD-- 463
+ + + AC G +K G F D +D
Sbjct: 163 TLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDEL 222
Query: 464 VKPSLKHYTCMVDLLSRAGELGEAYEFIKKIP----MAPDSVMWGALLGGCVSHGNLEFG 519
++P +T ++ L+R EA F + M PD +G +L C + G L+ G
Sbjct: 223 LEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQG 282
Query: 520 QIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSW 573
+ ++I GN V+ ++L G+ + + Q++ D RM SW
Sbjct: 283 KEVHAKVI--TTGFCGNVVVESSLVDMYGKCGSVGES-QRIFD-RMPIKNSVSW 332
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 104/243 (42%), Gaps = 65/243 (26%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWN-------------------------------SV 29
MYGKCGS+ +++++F MP ++ VSW+ ++
Sbjct: 307 MYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFRKMEKVDLYCFGTI 366
Query: 30 VTACAANGLVLEALE----------------------------CLERMSSLDNETP--NL 59
+ CA V + E C+E ++ ++ P NL
Sbjct: 367 LRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQTIFDQMPVRNL 426
Query: 60 VSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
++W+++IGGF QNG EEA+ + +M EG++P+ + +L AC+ + G+E+
Sbjct: 427 ITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFIGILFACSHRGLVDEGREYFIS 486
Query: 120 ITRN-GFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVG---YCENGN 175
+T++ G + +VD+ R G + A + +++ S ++G C N
Sbjct: 487 MTKDYGIKVGIEHYSCMVDLLGRAGLLEEAEILIETSDFRDDSSLWAALLGACTTCTNYE 546
Query: 176 VAE 178
+AE
Sbjct: 547 IAE 549
>gi|34393605|dbj|BAC83258.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
gi|50509373|dbj|BAD30928.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
Length = 808
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 199/643 (30%), Positives = 341/643 (53%), Gaps = 50/643 (7%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y L +F+ P+ V+ S+V A AA G + +A + + +T V
Sbjct: 72 LYTLSPDLATPAALFRSDPDPGPVAATSLVAAHAAAGRLRDAAAFFDAVPPARRDT---V 128
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEG-LEPNARTLSSVLPACARLQKLSLG--KEFH 117
+A++ F + A+ + + G L P+ + ++++ A ++ L+ + H
Sbjct: 129 LHNAMMSAFARASLAAPAVSVFHALLGSGSLRPDDYSFTALISAVGQMHNLAAPHCTQLH 188
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGD---MLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
+ ++G + V N L+ +Y +C A K+ + K++++ T++VGY G
Sbjct: 189 CSVLKSGAAAVLSVSNALIALYMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRG 248
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTF 234
+V AR +F++++ + + WN+MISGYV + + +AF +FR ++ + + FTF
Sbjct: 249 DVNAARSVFEEVD----GKFDVVWNAMISGYVQSGMCADAFELFRRMV-SEKVPLDEFTF 303
Query: 235 GSVLIACADMNSLRKGKEIHALAIALGL----QSDTFVGGALVEMYCRYQDLVAAQMAFD 290
SVL ACA+ GK +H I L ++ V ALV +Y + +V A+ FD
Sbjct: 304 TSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFD 363
Query: 291 -----EIENIENLLGKMKEDG--------FEPNVY----TW--------------NAMQL 319
++ + +L + G F+ Y +W +A++L
Sbjct: 364 TMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKL 423
Query: 320 FSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAK 379
F++M + D+ P YT ++AC L ++ G+Q+HA+ ++CG+++ G AL+ MYAK
Sbjct: 424 FNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAK 483
Query: 380 CGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSA 439
CG++ ARL + + D VS NAM++A HGHG+E + F +++A G PD ISFL+
Sbjct: 484 CGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTI 543
Query: 440 LSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAP 498
L+AC HAG + G +F+ M + + P HY ++DLL R+G +GEA + IK +P P
Sbjct: 544 LTACNHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEP 603
Query: 499 DSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQ 558
+W A+L GC ++G++EFG AAD+L + P + G Y++L+N ++ AGRW D AR R+
Sbjct: 604 TPSIWEAILSGCRTNGDMEFGAYAADQLFRMIPQHDGTYILLSNTYSAAGRWVDAARVRK 663
Query: 559 KMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
M+DR + K PGCSWIE +IH F D H ++E+Y ++
Sbjct: 664 LMRDRGVKKEPGCSWIEVGSKIHVFLVGDTKHPEAQEVYQFLE 706
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 93/460 (20%), Positives = 186/460 (40%), Gaps = 74/460 (16%)
Query: 127 SNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQM 186
S+P + L+ +Y D+ + +F V+ +++ + G + +A FD +
Sbjct: 61 SHPHLTLRLIHLYTLSPDLATPAALFRSDPDPGPVAATSLVAAHAAAGRLRDAAAFFDAV 120
Query: 187 EHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNS 246
+R + N+M+S + SL A S+F LL + P ++F +++ A M++
Sbjct: 121 P--PARRDTVLHNAMMSAFARASLAAPAVSVFHALLGSGSLRPDDYSFTALISAVGQMHN 178
Query: 247 LRKG--KEIHALAIALGLQSDTFVGGALVEM----------------------------- 275
L ++H + G + V AL+ +
Sbjct: 179 LAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTPEASWDARKVLDEMPDKDDLTWT 238
Query: 276 -----YCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTP 330
Y R D+ AA+ F+E++ +++ G+ + +A +LF M+S +
Sbjct: 239 TMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPL 298
Query: 331 DIYTVGIILSACSSLATMERGKQVHAYAIRCG----YDSDVHIGTALVDMYAKCGSLKHA 386
D +T +LSAC++ GK VH IR ++ + + ALV +Y+K G + A
Sbjct: 299 DEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIA 358
Query: 387 RLAYKRISTPDLVSQNAMLTAYAMHG----------------------------HG---K 415
+ + ++ D+VS N +L+ Y G HG +
Sbjct: 359 KRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSE 418
Query: 416 EGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMV 475
+ + F ++ A +P ++ A++AC G++K G + + + S ++
Sbjct: 419 DALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALL 478
Query: 476 DLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
+ ++ G + +A +P DSV W A++ HG+
Sbjct: 479 TMYAKCGAVNDARLVFLVMPNL-DSVSWNAMISALGQHGH 517
>gi|225457769|ref|XP_002278218.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial [Vitis vinifera]
gi|302142763|emb|CBI19966.3| unnamed protein product [Vitis vinifera]
Length = 1048
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 195/604 (32%), Positives = 316/604 (52%), Gaps = 77/604 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG+L++A++ F+ + RD V
Sbjct: 494 MYAKCGALEEARQQFEFIRNRDNV------------------------------------ 517
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A+I G+ Q ++EA M RM +G+ P+ +L+S+L CA LQ L G++ H ++
Sbjct: 518 SWNAIIVGYVQEEDEDEAFNMFRRMILDGIAPDEVSLASILSGCANLQALEQGEQVHCFL 577
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
++G + + + L+D+Y +CG + +A +FS
Sbjct: 578 VKSGLQTCLYAGSSLIDMYVKCGAIEAARYVFSCMP------------------------ 613
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
R ++S N++I+GY N L EA +F+++ +G+ P+ TF S+L A
Sbjct: 614 -----------SRSVVSMNAIIAGYAQNDLV-EAIDLFQEM-QNEGLNPSEITFASLLDA 660
Query: 241 CADMNSLRKGKEIHALAIALGLQSD-TFVGGALVEMYCRYQDLVAAQMAFDEIENIEN-L 298
C L G++IH L GL D F+G +L+ MY Q A + F E + ++ +
Sbjct: 661 CTGPYKLNLGRQIHCLIQKRGLLYDGDFLGVSLLVMYMNSQRKTDADILFSEFQYPKSTI 720
Query: 299 LGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYA 358
L G N + A+QL+ EM + PD T +L ACS LA++ G+ +H+
Sbjct: 721 LWTAIISGHTQNGCSEEALQLYQEMHRNNARPDQATFASVLRACSILASLGDGRMIHSLI 780
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRI-STPDLVSQNAMLTAYAMHGHGKEG 417
G DSD G+A+VDMYAKCG +K + ++ + S D++S N+M+ +A +G+ +
Sbjct: 781 FHVGLDSDELTGSAVVDMYAKCGDMKSSVQVFEEMGSKNDVISWNSMIVGFAKNGYAENA 840
Query: 418 IAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVD 476
+ F + + RPD ++FL L+AC HAG + G E FD+M + Y + P L H CM+D
Sbjct: 841 LKIFDEMKHTRIRPDDVTFLGVLTACSHAGRVSEGREIFDIMVHSYKIVPRLDHCACMID 900
Query: 477 LLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGN 536
LL R G L EA EFI K+ P++++W LLG C HG+ G+ AA++LIELEP N+
Sbjct: 901 LLGRWGFLKEAEEFIDKLNFEPNAMIWATLLGACRIHGDDIRGRRAAEKLIELEPENSSP 960
Query: 537 YVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEI 596
YV+L+N++A +G W ++ R+ M+++ + K PGCSWI + + F A D+ H + EI
Sbjct: 961 YVLLSNIYAASGNWDEVNSVRRAMREKGLRKLPGCSWIVVGQKTNLFVAGDKFHPSAGEI 1020
Query: 597 YTII 600
+ ++
Sbjct: 1021 HALL 1024
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 155/540 (28%), Positives = 259/540 (47%), Gaps = 69/540 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KCG+++ A K F + +RD ++
Sbjct: 125 LYAKCGNVEFAAKAFNQLEKRD------------------------------------IL 148
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W++V+ +++ G E+ I +Q G+ PN T + VL +CARL + LGK+ H +
Sbjct: 149 AWNSVLSMYSRQGSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGV 208
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ GF N F L+D+Y +CG ++ A KIF + VS +I GY + G EA
Sbjct: 209 IKMGFEFNSFCEGSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEAL 268
Query: 181 ELFDQMEHLGV-------------------------------QRGIISWNSMISGYVDNS 209
++F+ M+ LG+ +++WN MISG+V
Sbjct: 269 KVFEDMQKLGLVPDQVAFVTVITACVGLGRLDDACDLFVQMPNTNVVAWNVMISGHVKRG 328
Query: 210 LYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVG 269
EA F+++ + G++ T T GSVL A A + +L G +HA AI GL S+ +VG
Sbjct: 329 CDIEAIDFFKNM-WKTGVKSTRSTLGSVLSAIASLEALNYGLLVHAQAIKQGLNSNVYVG 387
Query: 270 GALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLT 329
+L+ MY + + + AA+ FD ++ +L G+ N Y M+LFSEM
Sbjct: 388 SSLINMYAKCEKMEAAKKVFDALDERNLVLWNAMLGGYAQNGYASKVMKLFSEMRGCGFW 447
Query: 330 PDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLA 389
PD +T ILSAC+ L +E G+Q+H++ I+ ++ ++ + LVDMYAKCG+L+ AR
Sbjct: 448 PDEFTYTSILSACACLECLEMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGALEEARQQ 507
Query: 390 YKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSI 449
++ I D VS NA++ Y E FRR++ G PD +S S LS C + ++
Sbjct: 508 FEFIRNRDNVSWNAIIVGYVQEEDEDEAFNMFRRMILDGIAPDEVSLASILSGCANLQAL 567
Query: 450 KTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
+ G + + ++ L + ++D+ + G + EA ++ + V A++ G
Sbjct: 568 EQGEQVHCFLVKSGLQTCLYAGSSLIDMYVKCGAI-EAARYVFSCMPSRSVVSMNAIIAG 626
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 150/323 (46%), Gaps = 10/323 (3%)
Query: 248 RKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGF 307
R K IHA + G S +G A+V++Y + ++ A AF+++E + L +
Sbjct: 98 RTSKTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMY 157
Query: 308 EPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDV 367
+ F + + ++P+ +T I+LS+C+ L ++ GKQVH I+ G++ +
Sbjct: 158 SRQGSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNS 217
Query: 368 HIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILAS 427
+L+DMY+KCGSL AR + + PD VS AM+ Y G +E + F +
Sbjct: 218 FCEGSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQKL 277
Query: 428 GFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEA 487
G PD ++F++ ++ACV G + + F M +V + M+ + G EA
Sbjct: 278 GLVPDQVAFVTVITACVGLGRLDDACDLFVQMPNTNVVA----WNVMISGHVKRGCDIEA 333
Query: 488 YEFIK---KIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYV--MLAN 542
+F K K + G++L S L +G + + I+ + N+ YV L N
Sbjct: 334 IDFFKNMWKTGVKSTRSTLGSVLSAIASLEALNYGLLVHAQAIK-QGLNSNVYVGSSLIN 392
Query: 543 LFAYAGRWSDLARTRQKMKDRRM 565
++A + + + +R +
Sbjct: 393 MYAKCEKMEAAKKVFDALDERNL 415
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 86/415 (20%), Positives = 165/415 (39%), Gaps = 100/415 (24%)
Query: 114 KEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCEN 173
K H + GF S + + +VD+Y +CG++ A K F++ ++ ++ N+++ Y
Sbjct: 101 KTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMYSRQ 160
Query: 174 GNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFT 233
G++ + F +++ GV P FT
Sbjct: 161 GSLEQVIWCFGSLQNCGV------------------------------------SPNQFT 184
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
+ VL +CA + + GK++H I +G + ++F G+L++MY + LV A+ FD +
Sbjct: 185 YAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNSFCEGSLIDMYSKCGSLVDARKIFDAVV 244
Query: 294 NIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ 353
+ + + G+ A+++F +M L L PD +++AC L
Sbjct: 245 DPDTVSWTAMIAGYVQVGLPEEALKVFEDMQKLGLVPDQVAFVTVITACVGL-------- 296
Query: 354 VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGH 413
G L A + ++ ++V+ N M++ + G
Sbjct: 297 ---------------------------GRLDDACDLFVQMPNTNVVAWNVMISGHVKRGC 329
Query: 414 GKEGIAHFRRILASGFRPDHISFLSALSAC-----------VHAGSIKTGSEFFDLMAYY 462
E I F+ + +G + + S LSA VHA +IK G
Sbjct: 330 DIEAIDFFKNMWKTGVKSTRSTLGSVLSAIASLEALNYGLLVHAQAIKQG---------- 379
Query: 463 DVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDS---VMWGALLGGCVSHG 514
+ ++ + ++++ ++ E E KK+ A D V+W A+LGG +G
Sbjct: 380 -LNSNVYVGSSLINMYAKC----EKMEAAKKVFDALDERNLVLWNAMLGGYAQNG 429
>gi|356541109|ref|XP_003539025.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g18840-like [Glycine max]
Length = 681
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 194/638 (30%), Positives = 334/638 (52%), Gaps = 47/638 (7%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y G L +A K+F MP + SWN+++ A + +A + S D LV
Sbjct: 27 LYSNHGLLQEAHKLFDEMPHPNVFSWNAIIMAYIKAHNLTQARALFDSASHRD-----LV 81
Query: 61 SWSAVIGGFT-QNGYDEEAIGMLFRMQA--EGLEPNARTLSSVLPACARLQKLSLGKEFH 117
S+++++ + +GY+ EA+ + RMQ+ + + + TL+++L A+L+ L GK+ H
Sbjct: 82 SYNSLLSAYVGSDGYETEALDLFTRMQSARDTIGIDEITLTNMLNLAAKLRVLCYGKQMH 141
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIF-SKFSIKNEVSCNTIIVGYCENGNV 176
Y+ + + F ++ L+D+Y +CG A +F S + + VS N ++ C G +
Sbjct: 142 SYMVKTANDLSKFALSSLIDMYSKCGCFQEACNLFGSCDEMVDLVSKNAMVAACCREGKM 201
Query: 177 AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGS 236
A +F + L + +SWN++I+GY N +++ + F +++ +GI+ T S
Sbjct: 202 DMALNVFWKNPEL---KDTVSWNTLIAGYSQNGYMEKSLTFFVEMI-ENGIDFNEHTLAS 257
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYC-----RYQDLVAAQMAFDE 291
VL AC+ + + GK +HA + G S+ F+ +V+ Y RY +LV A++
Sbjct: 258 VLNACSALKCSKLGKSVHAWVLKKGYSSNQFISSGVVDFYSKCGNIRYAELVYAKIGIKS 317
Query: 292 IENIENLLGKMKEDG------------FEPNVYTWNAM--------------QLFSEMLS 325
+ +L+ G E N W A+ +LF E +
Sbjct: 318 PFAVASLIAAYSSQGNMTEAQRLFDSLLERNSVVWTALCSGYVKSQQCEAVFKLFREFRT 377
Query: 326 LD-LTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLK 384
+ L PD + IL AC+ A + GKQ+HAY +R + D + ++LVDMY+KCG++
Sbjct: 378 KEALVPDAMIIVSILGACAIQADLSLGKQIHAYILRMRFKVDKKLLSSLVDMYSKCGNVA 437
Query: 385 HARLAYKRI--STPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSA 442
+A ++ + S D + N ++ YA HG + I F+ +L +PD ++F++ LSA
Sbjct: 438 YAEKLFRLVTDSDRDAILYNVIIAGYAHHGFENKAIELFQEMLNKSVKPDAVTFVALLSA 497
Query: 443 CVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVM 502
C H G ++ G +FF M +Y+V P + HY CMVD+ RA +L +A EF++KIP+ D+ +
Sbjct: 498 CRHRGLVELGEQFFMSMEHYNVLPEIYHYACMVDMYGRANQLEKAVEFMRKIPIKIDATI 557
Query: 503 WGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKD 562
WGA L C + + A + L+++E +N YV LAN +A G+W ++ R R+KM+
Sbjct: 558 WGAFLNACQMSSDAALVKQAEEELLKVEADNGSRYVQLANAYAAKGKWDEMGRIRKKMRG 617
Query: 563 RRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTII 600
K GCSWI + IH F + DRSH ++E +Y+ +
Sbjct: 618 HEAKKLAGCSWIYVENGIHVFTSGDRSHSKAEAVYSTL 655
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 116/466 (24%), Positives = 206/466 (44%), Gaps = 72/466 (15%)
Query: 117 HGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNV 176
H ++G +S+ F N L+ +Y G + A K+F + N S N II+ Y + N+
Sbjct: 6 HVQAIKSGLVSSIFTCNQLIHLYSNHGLLQEAHKLFDEMPHPNVFSWNAIIMAYIKAHNL 65
Query: 177 AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYD-EAFSMF-RDLLMRDGIEPTSFTF 234
+AR LFD H R ++S+NS++S YV + Y+ EA +F R RD I T
Sbjct: 66 TQARALFDSASH----RDLVSYNSLLSAYVGSDGYETEALDLFTRMQSARDTIGIDEITL 121
Query: 235 GSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCR---YQD---------- 281
++L A + L GK++H+ + F +L++MY + +Q+
Sbjct: 122 TNMLNLAAKLRVLCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGCFQEACNLFGSCDE 181
Query: 282 ---------LVAAQMAFDEIENIENLLGKMKE-----------DGFEPNVYTWNAMQLFS 321
+VAA +++ N+ K E G+ N Y ++ F
Sbjct: 182 MVDLVSKNAMVAACCREGKMDMALNVFWKNPELKDTVSWNTLIAGYSQNGYMEKSLTFFV 241
Query: 322 EMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCG 381
EM+ + + +T+ +L+ACS+L + GK VHA+ ++ GY S+ I + +VD Y+KCG
Sbjct: 242 EMIENGIDFNEHTLASVLNACSALKCSKLGKSVHAWVLKKGYSSNQFISSGVVDFYSKCG 301
Query: 382 SLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRI----------LASG--- 428
++++A L Y +I + +++ AY+ G+ E F + L SG
Sbjct: 302 NIRYAELVYAKIGIKSPFAVASLIAAYSSQGNMTEAQRLFDSLLERNSVVWTALCSGYVK 361
Query: 429 ----------FR---------PDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLK 469
FR PD + +S L AC + G + + K K
Sbjct: 362 SQQCEAVFKLFREFRTKEALVPDAMIIVSILGACAIQADLSLGKQIHAYILRMRFKVDKK 421
Query: 470 HYTCMVDLLSRAGELGEAYEFIKKIPMAP-DSVMWGALLGGCVSHG 514
+ +VD+ S+ G + A + + + + D++++ ++ G HG
Sbjct: 422 LLSSLVDMYSKCGNVAYAEKLFRLVTDSDRDAILYNVIIAGYAHHG 467
>gi|356530157|ref|XP_003533650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Glycine max]
Length = 711
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 195/604 (32%), Positives = 320/604 (52%), Gaps = 30/604 (4%)
Query: 2 YGKCGSLDDAKKVF--KMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNL 59
Y + G LD A+KVF +P R SWN++V A EAL E+M N
Sbjct: 32 YARNGQLDHARKVFDETPLPHRTVSSWNAMVAAYFEARQPREALLLFEKMPQR-----NT 86
Query: 60 VSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
VSW+ +I G +NG EA + M + N + +S++ R ++ + +
Sbjct: 87 VSWNGLISGHIKNGMLSEARRVFDTMP----DRNVVSWTSMVRGYVRNGDVAEAERLFWH 142
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ +S ++ GL+ G + A K+F K+ V+ +I GYCE G + EA
Sbjct: 143 MPHKNVVSWTVMLGGLLQE----GRVDDARKLFDMMPEKDVVAVTNMIGGYCEEGRLDEA 198
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
R LFD+M +R +++W +M+SGY N D A +F + R+ + T+ G
Sbjct: 199 RALFDEMP----KRNVVTWTAMVSGYARNGKVDVARKLFEVMPERNEVSWTAMLLGYTHS 254
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
+ +E +L A+ ++ V ++ + ++ A+ F ++ +N
Sbjct: 255 G--------RMREASSLFDAMPVKP-VVVCNEMIMGFGLNGEVDKARRVFKGMKERDNGT 305
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
+E Y A+ LF M L + ++ +LS C SLA+++ GKQVHA +
Sbjct: 306 WSAMIKVYERKGYELEALGLFRRMQREGLALNFPSLISVLSVCVSLASLDHGKQVHAQLV 365
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
R +D D+++ + L+ MY KCG+L A+ + R D+V N+M+T Y+ HG G+E +
Sbjct: 366 RSEFDQDLYVASVLITMYVKCGNLVRAKQVFNRFPLKDVVMWNSMITGYSQHGLGEEALN 425
Query: 420 HFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLL 478
F + +SG PD ++F+ LSAC ++G +K G E F+ M Y V+P ++HY C+VDLL
Sbjct: 426 VFHDMCSSGVPPDDVTFIGVLSACSYSGKVKEGLELFETMKCKYQVEPGIEHYACLVDLL 485
Query: 479 SRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYV 538
RA ++ EA + ++K+PM PD+++WGALLG C +H L+ ++A ++L +LEP N G YV
Sbjct: 486 GRADQVNEAMKLVEKMPMEPDAIVWGALLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYV 545
Query: 539 MLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASD-RSHDRSEEIY 597
+L+N++AY GRW D+ R+K+K R + K PGCSWIE ++H F D + H I
Sbjct: 546 LLSNMYAYKGRWRDVEVLREKIKARSVTKLPGCSWIEVEKKVHMFTGGDSKGHPEQPIIM 605
Query: 598 TIID 601
+++
Sbjct: 606 KMLE 609
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 93/433 (21%), Positives = 167/433 (38%), Gaps = 78/433 (18%)
Query: 138 VYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQ--MEHLGV---- 191
+ RRC M+ +++ S ++C Y NG + AR++FD+ + H V
Sbjct: 8 ILRRC--MMLQVRLQCTTSSSYAIAC------YARNGQLDHARKVFDETPLPHRTVSSWN 59
Query: 192 -----------------------QRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIE 228
QR +SWN +ISG++ N + EA +F + R+ +
Sbjct: 60 AMVAAYFEARQPREALLLFEKMPQRNTVSWNGLISGHIKNGMLSEARRVFDTMPDRNVVS 119
Query: 229 PTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFV------GGALVEMYCRYQDL 282
TS G V R G A + + V GG L E
Sbjct: 120 WTSMVRGYV----------RNGDVAEAERLFWHMPHKNVVSWTVMLGGLLQEGRVDDARK 169
Query: 283 VAAQMAFDEIENIENLLGKMKEDGF------------EPNVYTWNAM-QLFSEMLSLDLT 329
+ M ++ + N++G E+G + NV TW AM ++ +D+
Sbjct: 170 LFDMMPEKDVVAVTNMIGGYCEEGRLDEARALFDEMPKRNVVTWTAMVSGYARNGKVDVA 229
Query: 330 PDIYTVGIILSACSSLATM----ERGKQVHAYAIRCGYDS----DVHIGTALVDMYAKCG 381
++ V + S A + G+ A ++ +D+ V + ++ + G
Sbjct: 230 RKLFEVMPERNEVSWTAMLLGYTHSGRMREASSL---FDAMPVKPVVVCNEMIMGFGLNG 286
Query: 382 SLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALS 441
+ AR +K + D + +AM+ Y G+ E + FRR+ G + S +S LS
Sbjct: 287 EVDKARRVFKGMKERDNGTWSAMIKVYERKGYELEALGLFRRMQREGLALNFPSLISVLS 346
Query: 442 ACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSV 501
CV S+ G + + + L + ++ + + G L A + + P+ D V
Sbjct: 347 VCVSLASLDHGKQVHAQLVRSEFDQDLYVASVLITMYVKCGNLVRAKQVFNRFPLK-DVV 405
Query: 502 MWGALLGGCVSHG 514
MW +++ G HG
Sbjct: 406 MWNSMITGYSQHG 418
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG+L AK+VF P +D V WNS++T + +GL EAL M S P+ V
Sbjct: 382 MYVKCGNLVRAKQVFNRFPLKDVVMWNSMITGYSQHGLGEEALNVFHDMCS-SGVPPDDV 440
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEP 92
++ V+ + +G +E + + M+ + +EP
Sbjct: 441 TFIGVLSACSYSGKVKEGLELFETMKCKYQVEP 473
>gi|15233590|ref|NP_193861.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207660|sp|Q9STE1.1|PP333_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21300
gi|3402749|emb|CAA20195.1| putative protein [Arabidopsis thaliana]
gi|7268926|emb|CAB79129.1| putative protein [Arabidopsis thaliana]
gi|332659037|gb|AEE84437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 857
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 192/617 (31%), Positives = 308/617 (49%), Gaps = 102/617 (16%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG DDA K+F+MM D V+WN
Sbjct: 283 MYSKCGRFDDASKLFRMMSRADTVTWN--------------------------------- 309
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+I G+ Q+G EE++ + M + G+ P+A T SS+LP+ ++ + L K+ H YI
Sbjct: 310 ---CMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYI 366
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R+ + F+ + L+D Y +C + A IFS+ CN++
Sbjct: 367 MRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQ--------CNSV-------------- 404
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
++ + +MISGY+ N LY ++ MFR L++ I P T S+L
Sbjct: 405 -------------DVVVFTAMISGYLHNGLYIDSLEMFR-WLVKVKISPNEITLVSILPV 450
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
+ +L+ G+E+H I G + +G A+++MY + + A F+ +
Sbjct: 451 IGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLS------- 503
Query: 301 KMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSSLA 346
K D + +WN+M +F +M + D ++ LSAC++L
Sbjct: 504 --KRD-----IVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLP 556
Query: 347 TMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLT 406
+ GK +H + I+ SDV+ + L+DMYAKCG+LK A +K + ++VS N+++
Sbjct: 557 SESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIA 616
Query: 407 AYAMHGHGKEGIAHFRRIL-ASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDV 464
A HG K+ + F ++ SG RPD I+FL +S+C H G + G FF M Y +
Sbjct: 617 ACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGI 676
Query: 465 KPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAAD 524
+P +HY C+VDL RAG L EAYE +K +P PD+ +WG LLG C H N+E ++A+
Sbjct: 677 QPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASS 736
Query: 525 RLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFR 584
+L++L+P+N+G YV+++N A A W + + R MK+R + K PG SWIE H F
Sbjct: 737 KLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFV 796
Query: 585 ASDRSHDRSEEIYTIID 601
+ D +H S IY++++
Sbjct: 797 SGDVNHPESSHIYSLLN 813
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 139/563 (24%), Positives = 260/563 (46%), Gaps = 62/563 (11%)
Query: 1 MYGKCGSLDDAKKVFKMMPER--DCVSWNSVVTACAANGLVLEALECLERM----SSLDN 54
MY CGS D K+F + R WNS++++ NGL+ +AL +M S D
Sbjct: 79 MYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDV 138
Query: 55 ET-PNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLG 113
T P LV + F + + + L G++ N SS++ A K+ +
Sbjct: 139 STFPCLVKACVALKNFKGIDFLSDTVSSL------GMDCNEFVASSLIKAYLEYGKIDVP 192
Query: 114 KEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSI----KNEVS--C---- 163
+ + + + ++NG Y +CG + S +K FS + N V+ C
Sbjct: 193 SKLFDRVLQKDCVIWNVMLNG----YAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSV 248
Query: 164 -----------------------------NTIIVGYCENGNVAEARELFDQMEHLGVQRG 194
N+++ Y + G +A +LF M +
Sbjct: 249 CASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMS----RAD 304
Query: 195 IISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIH 254
++WN MISGYV + L +E+ + F +++ G+ P + TF S+L + + +L K+IH
Sbjct: 305 TVTWNCMISGYVQSGLMEESLTFFYEMI-SSGVLPDAITFSSLLPSVSKFENLEYCKQIH 363
Query: 255 ALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTW 314
+ + D F+ AL++ Y + + + AQ F + +++ ++ G+ N
Sbjct: 364 CYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYI 423
Query: 315 NAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALV 374
+++++F ++ + ++P+ T+ IL L ++ G+++H + I+ G+D+ +IG A++
Sbjct: 424 DSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVI 483
Query: 375 DMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHI 434
DMYAKCG + A ++R+S D+VS N+M+T A + I FR++ SG D +
Sbjct: 484 DMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCV 543
Query: 435 SFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKI 494
S +ALSAC + S G M + + + + ++D+ ++ G L A K +
Sbjct: 544 SISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTM 603
Query: 495 PMAPDSVMWGALLGGCVSHGNLE 517
+ V W +++ C +HG L+
Sbjct: 604 K-EKNIVSWNSIIAACGNHGKLK 625
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 155/352 (44%), Gaps = 34/352 (9%)
Query: 91 EPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALK 150
E R LS +L AC+ L GK+ H ++ N + + ++ +Y CG K
Sbjct: 32 ETIPRRLSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGK 91
Query: 151 IFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSL 210
+F + ++ + I WNS+IS +V N L
Sbjct: 92 MFYRLDLR---------------------------------RSSIRPWNSIISSFVRNGL 118
Query: 211 YDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGG 270
++A + + +L G+ P TF ++ AC + + + + +LG+ + FV
Sbjct: 119 LNQALAFYFKMLCF-GVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVAS 177
Query: 271 ALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTP 330
+L++ Y Y + FD + + ++ + +G+ + ++ FS M ++P
Sbjct: 178 SLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISP 237
Query: 331 DIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAY 390
+ T +LS C+S ++ G Q+H + G D + I +L+ MY+KCG A +
Sbjct: 238 NAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLF 297
Query: 391 KRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSA 442
+ +S D V+ N M++ Y G +E + F +++SG PD I+F S L +
Sbjct: 298 RMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPS 349
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 120/285 (42%), Gaps = 7/285 (2%)
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
+L AC++ N LR+GK++HA I + D++ ++ MY F ++
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRR 100
Query: 297 NLLGKMKE--DGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV 354
+ + F N A+ + +ML ++PD+ T ++ AC +L + +
Sbjct: 101 SSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFL 160
Query: 355 HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHG 414
G D + + ++L+ Y + G + + R+ D V N ML YA G
Sbjct: 161 SDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGAL 220
Query: 415 KEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY--YDVKPSLKHYT 472
I F + P+ ++F LS C I G + L+ D + S+K+
Sbjct: 221 DSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKN-- 278
Query: 473 CMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
++ + S+ G +A + + + A D+V W ++ G V G +E
Sbjct: 279 SLLSMYSKCGRFDDASKLFRMMSRA-DTVTWNCMISGYVQSGLME 322
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 91/202 (45%), Gaps = 5/202 (2%)
Query: 335 VGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS 394
+ ++L ACS+ + +GKQVHA+ I D + ++ MYA CGS + R+
Sbjct: 38 LSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLD 97
Query: 395 T--PDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTG 452
+ N++++++ +G + +A + ++L G PD +F + ACV + K
Sbjct: 98 LRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGI 157
Query: 453 SEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVS 512
D ++ + + + ++ G++ + ++ + D V+W +L G
Sbjct: 158 DFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRV-LQKDCVIWNVMLNGYAK 216
Query: 513 HGNLE--FGQIAADRLIELEPN 532
G L+ + R+ ++ PN
Sbjct: 217 CGALDSVIKGFSVMRMDQISPN 238
>gi|115475988|ref|NP_001061590.1| Os08g0340900 [Oryza sativa Japonica Group]
gi|38423978|dbj|BAD01706.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|38637396|dbj|BAD03655.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|113623559|dbj|BAF23504.1| Os08g0340900 [Oryza sativa Japonica Group]
gi|215686971|dbj|BAG90841.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 819
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 197/667 (29%), Positives = 332/667 (49%), Gaps = 102/667 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSV------------------------------- 29
+Y K G +D+A VF +P R V+WN+V
Sbjct: 164 LYAKLGCMDEAMLVFHALPVRTPVTWNTVITGYAQIGCGGVALELFDRMGIEGVRPDRFV 223
Query: 30 ----VTACAANGL------------------------VLEALEC-LERMSSLDN-----E 55
V+AC+A G VL L C R+S+ E
Sbjct: 224 LASAVSACSALGFLEGGRQIHGYAYRSATETDTSVINVLIDLYCKCSRLSAARKLFDCME 283
Query: 56 TPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKE 115
NLVSW+ +I G+ QN ++ EAI M + M G +P+ +S+L +C L + G++
Sbjct: 284 YRNLVSWTTMISGYMQNSFNAEAITMFWNMTQAGWQPDGFACTSILNSCGSLAAIWQGRQ 343
Query: 116 FHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGN 175
H ++ + ++ +V N L+D+Y +C +
Sbjct: 344 IHAHVIKADLEADEYVKNALIDMYAKCE-------------------------------H 372
Query: 176 VAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFG 235
+ EAR +FD + + IS+N+MI GY N EA ++F+ + + P+ TF
Sbjct: 373 LTEARAVFDAL----AEDDAISYNAMIEGYSKNRDLAEAVNIFQRMRFFS-LRPSLLTFV 427
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
S+L + ++ K+IH L I G D + AL+++Y + + A+ F+ +
Sbjct: 428 SLLGVSSSQLAIELSKQIHGLIIKSGTSLDLYAASALIDVYSKCSLVNDAKTVFNMLHYK 487
Query: 296 ENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVH 355
+ ++ G N A++LF+++L + P+ +T +++ S+LA+M G+Q H
Sbjct: 488 DMVIWNSMIFGHAQNEQGEEAIKLFNQLLLSGMAPNEFTFVALVTVASTLASMFHGQQFH 547
Query: 356 AYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGK 415
A+ I+ G D+D H+ AL+DMYAKCG +K R+ ++ D++ N+M+T YA HGH +
Sbjct: 548 AWIIKAGVDNDPHVSNALIDMYAKCGFIKEGRMLFESTCGEDVICWNSMITTYAQHGHAE 607
Query: 416 EGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCM 474
E + FR + + P++++F+ LSAC HAG + G F+ M + YD++P ++HY +
Sbjct: 608 EALQVFRLMGEAEVEPNYVTFVGVLSACAHAGFVGEGLNHFNSMKSNYDIEPGIEHYASV 667
Query: 475 VDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNT 534
V+L R+G+L A EFI+++P+ P + +W +LL C GN E G+ AA+ + +P ++
Sbjct: 668 VNLFGRSGKLHAAKEFIERMPIKPAAAVWRSLLSACHLFGNAEIGRYAAEMALLADPTDS 727
Query: 535 GNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSE 594
G YV+L+N++A G W+D+ RQ+M K GCSWIE E+H F R H +E
Sbjct: 728 GPYVLLSNIYASKGLWADVHNLRQQMDSSGTVKETGCSWIEVTKEVHTFIVRGREHPEAE 787
Query: 595 EIYTIID 601
IY+++D
Sbjct: 788 LIYSVLD 794
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 139/522 (26%), Positives = 233/522 (44%), Gaps = 77/522 (14%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y G L DA+ +F MP R+ VSW SV++
Sbjct: 63 YSNLGRLRDARHLFDRMPHRNLVSWGSVISM----------------------------- 93
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLE-PNARTLSSVLPACARLQKLSLGKEFHGYI 120
+TQ+G D+ AI + Q E PN L+SVL AC + + +SLG++ HG
Sbjct: 94 -------YTQHGRDDCAISLFVAFQKASCEVPNEFLLASVLRACTQSKAVSLGEQVHGIA 146
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ +N +V L+++Y + G M A+ +F ++ V+ NT+I GY + G A
Sbjct: 147 VKLDLDANVYVGTALINLYAKLGCMDEAMLVFHALPVRTPVTWNTVITGYAQIGCGGVAL 206
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
ELFD+M GI +G+ P F S + A
Sbjct: 207 ELFDRM-------GI-----------------------------EGVRPDRFVLASAVSA 230
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C+ + L G++IH A ++DT V L+++YC+ L AA+ FD +E +
Sbjct: 231 CSALGFLEGGRQIHGYAYRSATETDTSVINVLIDLYCKCSRLSAARKLFDCMEYRNLVSW 290
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G+ N + A+ +F M PD + IL++C SLA + +G+Q+HA+ I+
Sbjct: 291 TTMISGYMQNSFNAEAITMFWNMTQAGWQPDGFACTSILNSCGSLAAIWQGRQIHAHVIK 350
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
++D ++ AL+DMYAKC L AR + ++ D +S NAM+ Y+ + E +
Sbjct: 351 ADLEADEYVKNALIDMYAKCEHLTEARAVFDALAEDDAISYNAMIEGYSKNRDLAEAVNI 410
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSR 480
F+R+ RP ++F+S L +I+ + L+ L + ++D+ S+
Sbjct: 411 FQRMRFFSLRPSLLTFVSLLGVSSSQLAIELSKQIHGLIIKSGTSLDLYAASALIDVYSK 470
Query: 481 AGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIA 522
+ +A + D V+W +++ G H E G+ A
Sbjct: 471 CSLVNDAKTVFNMLHY-KDMVIWNSMIFG---HAQNEQGEEA 508
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 165/346 (47%), Gaps = 5/346 (1%)
Query: 164 NTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLM 223
N ++ GY G + +AR LFD+M H R ++SW S+IS Y + D A S+F
Sbjct: 57 NLLLRGYSNLGRLRDARHLFDRMPH----RNLVSWGSVISMYTQHGRDDCAISLFVAFQK 112
Query: 224 RDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLV 283
P F SVL AC ++ G+++H +A+ L L ++ +VG AL+ +Y + +
Sbjct: 113 ASCEVPNEFLLASVLRACTQSKAVSLGEQVHGIAVKLDLDANVYVGTALINLYAKLGCMD 172
Query: 284 AAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACS 343
A + F + + G+ A++LF M + PD + + +SACS
Sbjct: 173 EAMLVFHALPVRTPVTWNTVITGYAQIGCGGVALELFDRMGIEGVRPDRFVLASAVSACS 232
Query: 344 SLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNA 403
+L +E G+Q+H YA R ++D + L+D+Y KC L AR + + +LVS
Sbjct: 233 ALGFLEGGRQIHGYAYRSATETDTSVINVLIDLYCKCSRLSAARKLFDCMEYRNLVSWTT 292
Query: 404 MLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYD 463
M++ Y + E I F + +G++PD + S L++C +I G + + D
Sbjct: 293 MISGYMQNSFNAEAITMFWNMTQAGWQPDGFACTSILNSCGSLAAIWQGRQIHAHVIKAD 352
Query: 464 VKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
++ ++D+ ++ L EA + D++ + A++ G
Sbjct: 353 LEADEYVKNALIDMYAKCEHLTEARAVFDALA-EDDAISYNAMIEG 397
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 126/286 (44%), Gaps = 15/286 (5%)
Query: 233 TFGSVLIACADM--NSLRK-GKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAF 289
+ VL++C + LR+ IHA A G D F+ L+ Y L A+ F
Sbjct: 17 SLARVLLSCLPTGGDRLRRLNPAIHARATVAGRLDDLFLTNLLLRGYSNLGRLRDARHLF 76
Query: 290 DEIENIENLLGKMKEDGFEPNVYTWN-----AMQLFSEMLSLDL-TPDIYTVGIILSACS 343
D + + NL+ G ++YT + A+ LF P+ + + +L AC+
Sbjct: 77 DRMPH-RNLVSW----GSVISMYTQHGRDDCAISLFVAFQKASCEVPNEFLLASVLRACT 131
Query: 344 SLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNA 403
+ G+QVH A++ D++V++GTAL+++YAK G + A L + + V+ N
Sbjct: 132 QSKAVSLGEQVHGIAVKLDLDANVYVGTALINLYAKLGCMDEAMLVFHALPVRTPVTWNT 191
Query: 404 MLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYD 463
++T YA G G + F R+ G RPD SA+SAC G ++ G +
Sbjct: 192 VITGYAQIGCGGVALELFDRMGIEGVRPDRFVLASAVSACSALGFLEGGRQIHGYAYRSA 251
Query: 464 VKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
+ ++DL + L A + + + V W ++ G
Sbjct: 252 TETDTSVINVLIDLYCKCSRLSAARKLFDCMEYR-NLVSWTTMISG 296
>gi|147833409|emb|CAN68525.1| hypothetical protein VITISV_018083 [Vitis vinifera]
Length = 1796
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 202/628 (32%), Positives = 331/628 (52%), Gaps = 66/628 (10%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLD------- 53
MY +C S+ +A+++F+ MP+R+C SWN+++ +G ++LE + M D
Sbjct: 51 MYSRCNSMREAQQLFEEMPKRNCFSWNTMIEGYLKSGSKGKSLELFDSMPHKDAFSWNVV 110
Query: 54 -----------------NETP--NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEP-- 92
NE P N ++W+++I G+ NG +EA+G+ + LE
Sbjct: 111 ISGFAKEGNLEVARRLFNEMPWKNGIAWNSMIHGYACNGRPKEAVGLFKDLSLNPLERFC 170
Query: 93 -NARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKI 151
+ L++V+ AC L L GK+ H I + + + + LV++Y +CGD+ SA +
Sbjct: 171 GDTFVLATVVGACTNLGALDCGKQIHARIVVDEVEFDSVLGSSLVNLYGKCGDIDSANHV 230
Query: 152 FSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLY 211
+ + S + +I GY G + +AR +F L ++ WNSMISGYV N+
Sbjct: 231 LNLMKEPDAFSLSALISGYASCGRMNDARRIF----CLKSNXCVVLWNSMISGYVANNEA 286
Query: 212 DEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGA 271
EA +F ++ R G++ TF SVL AC+ + + +G ++HA +G +D + A
Sbjct: 287 LEALELFNNM-RRKGVQEDYSTFASVLSACSTLGIIDQGIQVHAHVYKVGFTNDIIIDSA 345
Query: 272 LVEMY--CRYQD----LVAAQMAFD---------------EIENIENLLGKMKED----- 305
LV+MY CR D L + A+D I++ + M
Sbjct: 346 LVDMYSKCRRPDDACKLFSDLQAYDTILLNSMITVYSNCGRIDDARQIFDTMPSKSLISW 405
Query: 306 -----GFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
GF N A+ LF EM L L D +++ ++SAC+S++++E G+Q+ A A
Sbjct: 406 NSMIVGFSQNACPIEALDLFCEMNKLGLRMDKFSLAGVISACASISSLELGEQIFARATI 465
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
G + D I T+LVD Y KCG ++H R + R+ D V N+ML YA +GHG E +
Sbjct: 466 IGLEFDQIISTSLVDFYCKCGLVEHGRKLFDRMMKSDEVPWNSMLMGYATNGHGIEALNV 525
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLS 479
F ++ + G +P I+F+ LSAC H G ++ G ++F M Y + P ++HY+CMVDL +
Sbjct: 526 FDQMRSVGVQPTDITFVGVLSACDHCGLVEEGRKWFYAMKLDYHINPGIEHYSCMVDLYA 585
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
RAG L +A I+++P+ D+ MW ++L GCV+HGN G+ A R+I+L+P N+G YV
Sbjct: 586 RAGLLEDAMNLIEQMPLKADTSMWSSVLRGCVAHGNNILGKKVAKRIIDLDPENSGAYVQ 645
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHK 567
L+ ++A W A+ R+ M D+++ K
Sbjct: 646 LSGIYATFEDWGRSAQVRKLMYDKKIPK 673
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 183/603 (30%), Positives = 312/603 (51%), Gaps = 48/603 (7%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y + G+ +D+ +VF+ + +++ +SWN + A G + A + + M D +V
Sbjct: 754 LYSQLGTGNDSLRVFEDIIDKNLISWNIFLKAFVRFGELERARDVFDEMPKRD-----VV 808
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ +I G+ G ++A MQ G+ P+ T S++L + + GK+ H +
Sbjct: 809 SWNTMISGYVSFGLFDDAFRFFSEMQKAGIRPSGFTYSTLLSFVSSACR---GKQIHASM 865
Query: 121 TRNGF-MSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
RNG +SN V N L+ +Y + G +V Y A
Sbjct: 866 IRNGVDLSNVVVGNSLIGMYGKFG-----------------------VVDY--------A 894
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRD-GIEPTSFTFGSVL 238
+F ME L IISWNS+I + + A F +LMR G P FT +V+
Sbjct: 895 FGVFITMEELD----IISWNSLIWSCGKSGYQNLALRQF--VLMRSVGYSPDQFTVSTVI 948
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
C+++ L KG++I AL I +G S++ V A ++++ + L + F+EI +++
Sbjct: 949 TVCSNLQDLEKGEQIFALCIRVGFLSNSIVSSASIDLFSKCNRLEDSVRVFEEIYQWDSV 1008
Query: 299 LGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYA 358
L + + + NA+QLF L +L P +T+ I+LSA S L +++G Q+H+
Sbjct: 1009 LCNAMISSYAWHGFGENALQLFVLTLRENLRPTEFTLSIVLSAVSILLPVDQGSQIHSLV 1068
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGI 418
++ G +SDV + ++LV+MYAK G + A + +I DL+S N M+ A +G + +
Sbjct: 1069 VKSGLESDVIVASSLVEMYAKFGLIDSAMKTFAKIGARDLISWNTMIMGLAYNGRVSKAL 1128
Query: 419 AHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDL 477
F+ +L G PD I+ L AC G + G F M Y V P+++HY C+VD+
Sbjct: 1129 EIFKELLIGGPPPDEITLAGVLLACNVGGLVDEGLSIFSSMEKEYGVIPAIEHYACIVDM 1188
Query: 478 LSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNY 537
+SR G+L EA + ++ +P P ++WG+LL C +G+L F + A+R++ELEP ++ Y
Sbjct: 1189 MSRGGKLKEAMDIVELMPHEPSGLIWGSLLCACEIYGDLRFTERVAERVMELEPQSSLPY 1248
Query: 538 VMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
++LA + GRW L R + MK++ + K GCSWI ++ + F+ + H ++IY
Sbjct: 1249 LVLAQAYEMRGRWESLVRVXRAMKEKGVRKVIGCSWIGIKNHVFVFKENQLLHIGGKDIY 1308
Query: 598 TII 600
I+
Sbjct: 1309 FIL 1311
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 149/557 (26%), Positives = 273/557 (49%), Gaps = 56/557 (10%)
Query: 1 MYGKCGSLDDAKKVFKMMPER-DCVSWNSVVTACAANGLVLEALECLERMSSLDNETPN- 58
+Y + G L+DA + + MP + D W+SV+ C A+G + + +R+ LD E
Sbjct: 583 LYARAGLLEDAMNLIEQMPLKADTSMWSSVLRGCVAHGNNILGKKVAKRIIDLDPENSGA 642
Query: 59 LVSWSAVIGGFTQNGYDEEAIGMLFRMQ--------------AEGLEPNARTLSS----- 99
V S + F G + +++ + EGL + ++
Sbjct: 643 YVQLSGIYATFEDWGRSAQVRKLMYDKKIPKDTSFDIAGEEGXEGLSSETKEVTKMKQRQ 702
Query: 100 --VLPACA--------RLQKLSLGK----EFHGYITRNGFMSNPFVVNGLVDVYRRCGDM 145
VL A R QK + EF I + GF ++ F+ N +D+Y + G
Sbjct: 703 NLVLRLVAEKKRECDERDQKFMAARRTLLEFDMLI-KVGFNTHTFLGNRCLDLYSQLGTG 761
Query: 146 LSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGY 205
+L++F KN +S N + + G + AR++FD+M +R ++SWN+MISGY
Sbjct: 762 NDSLRVFEDIIDKNLISWNIFLKAFVRFGELERARDVFDEMP----KRDVVSWNTMISGY 817
Query: 206 VDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQ-S 264
V L+D+AF F + + + GI P+ FT+ ++L + ++S +GK+IHA I G+ S
Sbjct: 818 VSFGLFDDAFRFFSE-MQKAGIRPSGFTYSTLL---SFVSSACRGKQIHASMIRNGVDLS 873
Query: 265 DTFVGGALVEMYCRYQDLVAAQMAFDEIENIE-----NLLGKMKEDGFEPNVYTWNAMQL 319
+ VG +L+ MY ++ + A F +E ++ +L+ + G++ N+ A++
Sbjct: 874 NVVVGNSLIGMYGKFGVVDYAFGVFITMEELDIISWNSLIWSCGKSGYQ-NL----ALRQ 928
Query: 320 FSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAK 379
F M S+ +PD +TV +++ CS+L +E+G+Q+ A IR G+ S+ + +A +D+++K
Sbjct: 929 FVLMRSVGYSPDQFTVSTVITVCSNLQDLEKGEQIFALCIRVGFLSNSIVSSASIDLFSK 988
Query: 380 CGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSA 439
C L+ + ++ I D V NAM+++YA HG G+ + F L RP +
Sbjct: 989 CNRLEDSVRVFEEIYQWDSVLCNAMISSYAWHGFGENALQLFVLTLRENLRPTEFTLSIV 1048
Query: 440 LSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPD 499
LSA + GS+ L+ ++ + + +V++ ++ G + A + KI A D
Sbjct: 1049 LSAVSILLPVDQGSQIHSLVVKSGLESDVIVASSLVEMYAKFGLIDSAMKTFAKIG-ARD 1107
Query: 500 SVMWGALLGGCVSHGNL 516
+ W ++ G +G +
Sbjct: 1108 LISWNTMIMGLAYNGRV 1124
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 124/512 (24%), Positives = 221/512 (43%), Gaps = 93/512 (18%)
Query: 96 TLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVV-NGLVDVYRRCGDMLSALKIFSK 154
+L+ L +C + G+ H ++G + + + N L+ +Y RC M A ++F +
Sbjct: 8 SLARQLGSCNNYGSIYRGRXLHILFLKSGVLHSVLSIGNRLLQMYSRCNSMREAQQLFEE 67
Query: 155 FSIKNEVSCNTIIVGYCENGNVAEARELFDQMEH------------------LGVQRGI- 195
+N S NT+I GY ++G+ ++ ELFD M H L V R +
Sbjct: 68 MPKRNCFSWNTMIEGYLKSGSKGKSLELFDSMPHKDAFSWNVVISGFAKEGNLEVARRLF 127
Query: 196 --------ISWNSMISGYVDNSLYDEAFSMFRDLLMR--DGIEPTSFTFGSVLIACADMN 245
I+WNSMI GY N EA +F+DL + + +F +V+ AC ++
Sbjct: 128 NEMPWKNGIAWNSMIHGYACNGRPKEAVGLFKDLSLNPLERFCGDTFVLATVVGACTNLG 187
Query: 246 SLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL------- 298
+L GK+IHA + ++ D+ +G +LV +Y + D+ +A + ++ +
Sbjct: 188 ALDCGKQIHARIVVDEVEFDSVLGSSLVNLYGKCGDIDSANHVLNLMKEPDAFSLSALIS 247
Query: 299 ----LGKMKE--------------------DGFEPNVYTWNAMQLFSEMLSLDLTPDIYT 334
G+M + G+ N A++LF+ M + D T
Sbjct: 248 GYASCGRMNDARRIFCLKSNXCVVLWNSMISGYVANNEALEALELFNNMRRKGVQEDYST 307
Query: 335 VGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAK--------------- 379
+LSACS+L +++G QVHA+ + G+ +D+ I +ALVDMY+K
Sbjct: 308 FASVLSACSTLGIIDQGIQVHAHVYKVGFTNDIIIDSALVDMYSKCRRPDDACKLFSDLQ 367
Query: 380 ----------------CGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRR 423
CG + AR + + + L+S N+M+ ++ + E + F
Sbjct: 368 AYDTILLNSMITVYSNCGRIDDARQIFDTMPSKSLISWNSMIVGFSQNACPIEALDLFCE 427
Query: 424 ILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGE 483
+ G R D S +SAC S++ G + F ++ T +VD + G
Sbjct: 428 MNKLGLRMDKFSLAGVISACASISSLELGEQIFARATIIGLEFDQIISTSLVDFYCKCGL 487
Query: 484 LGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
+ + ++ M D V W ++L G ++G+
Sbjct: 488 VEHGRKLFDRM-MKSDEVPWNSMLMGYATNGH 518
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 92/207 (44%), Gaps = 21/207 (10%)
Query: 331 DIYTVGIILSACSSLATMERGKQVHAYAIRCGY-DSDVHIGTALVDMYAKCGSLKHARLA 389
D++++ L +C++ ++ RG+ +H ++ G S + IG L+ MY++C S++ A+
Sbjct: 5 DLHSLARQLGSCNNYGSIYRGRXLHILFLKSGVLHSVLSIGNRLLQMYSRCNSMREAQQL 64
Query: 390 YKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSI 449
++ + + S N M+ Y G + + F S D S+ +S G++
Sbjct: 65 FEEMPKRNCFSWNTMIEGYLKSGSKGKSLELF----DSMPHKDAFSWNVVISGFAKEGNL 120
Query: 450 KTGSEFFDLMAYYD--VKPSLKH-YTCMVDLLSRAGELGEAYEFIKKIPMAP------DS 500
+ F+ M + + S+ H Y C G EA K + + P D+
Sbjct: 121 EVARRLFNEMPWKNGIAWNSMIHGYAC-------NGRPKEAVGLFKDLSLNPLERFCGDT 173
Query: 501 VMWGALLGGCVSHGNLEFGQIAADRLI 527
+ ++G C + G L+ G+ R++
Sbjct: 174 FVLATVVGACTNLGALDCGKQIHARIV 200
>gi|326532272|dbj|BAK05065.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 889
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 195/634 (30%), Positives = 332/634 (52%), Gaps = 74/634 (11%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
M+ +CG++D A K F + NS++ A + V ALE E M D +V
Sbjct: 206 MFVRCGAVDFASKQFSQIERPTVFCRNSMLAGYAKSYGVDHALELFESMPERD-----VV 260
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ ++ +Q+G EA+ + M G+ ++ T +S L ACA+L L GK+ H +
Sbjct: 261 SWNMMVSALSQSGRAREALSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQV 320
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R+ +P+V + +V++Y +CG A ++FS +N VS +I G+ + G +E+
Sbjct: 321 IRSLPCIDPYVASAMVELYAKCGCFKEARRVFSSLRDRNTVSWTVLIGGFLQYGCFSESL 380
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
ELF+QM +L+ D F +++
Sbjct: 381 ELFNQMR-------------------------------AELMTVD-----QFALATIISG 404
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL-- 298
C++ + +++H+L++ G + +L+ MY + +L A+ F +E + +
Sbjct: 405 CSNRMDMCLARQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSMEERDIVSW 464
Query: 299 ------------LGKMKE--DGFEP-NVYTWNAM--------------QLFSEMLS-LDL 328
+GK +E DG NV TWNAM +++S ML+ D+
Sbjct: 465 TGMLTAYSQVGNIGKAREFFDGMSTRNVITWNAMLGAYIQHGAEEDGLKMYSAMLTEKDV 524
Query: 329 TPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARL 388
PD T + C+ + + G Q+ + ++ G D + A++ MY+KCG + AR
Sbjct: 525 IPDWVTYVTLFRGCADMGANKLGDQITGHTVKVGLILDTSVMNAVITMYSKCGRISEARK 584
Query: 389 AYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGS 448
+ +S DLVS NAM+T Y+ HG GK+ I F +L G +PD+IS+++ LS+C H+G
Sbjct: 585 IFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDMLKKGAKPDYISYVAVLSSCSHSGL 644
Query: 449 IKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALL 507
++ G +FD++ ++V P L+H++CMVDLL+RAG L EA I ++PM P + +WGALL
Sbjct: 645 VQEGKFYFDMLKRDHNVSPGLEHFSCMVDLLARAGNLIEAKNLIDEMPMKPTAEVWGALL 704
Query: 508 GGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHK 567
C +HGN E ++AA L +L+ ++G Y++LA ++A AG+ D A+ R+ M+D+ + K
Sbjct: 705 SACKTHGNNELAELAAKHLFDLDSPDSGGYMLLAKIYADAGKSVDSAQVRKLMRDKGIKK 764
Query: 568 SPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
+PG SW+E ++++H F+A D SH + I +D
Sbjct: 765 NPGYSWMEVKNKVHVFKAEDVSHPQVIAIREKLD 798
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 151/554 (27%), Positives = 265/554 (47%), Gaps = 59/554 (10%)
Query: 2 YGKCGSLDDAKKVFKM-MPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
Y CG+L DA+ + + + E + ++ N ++ A G + +A E RM D +
Sbjct: 73 YLSCGALPDARGLLRGDITEPNVITHNIMMNGYAKLGSLSDAEELFGRMPRRD-----VT 127
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLE-PNARTLSSVLPACARLQKLSLGKEFHGY 119
SW+ ++ G+ Q+G +A+ M+ G PNA T + +C L + + G
Sbjct: 128 SWNTLMSGYYQSGRFLDAMESFVSMRRSGDSLPNAFTFGCAMKSCGALGWHEVALQLLGL 187
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+T+ GF +P V G+VD++ RCG + A K FS+ N+++ GY ++ V A
Sbjct: 188 LTKFGFQGDPDVATGIVDMFVRCGAVDFASKQFSQIERPTVFCRNSMLAGYAKSYGVDHA 247
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
ELF+ M +R ++SWN M+S + EA S+ D+ R G+ S T+ S L
Sbjct: 248 LELFESMP----ERDVVSWNMMVSALSQSGRAREALSVAVDMHNR-GVRLDSTTYTSSLT 302
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
ACA ++SL GK++HA I D +V A+VE+Y + A+ F + + +
Sbjct: 303 ACAKLSSLGWGKQLHAQVIRSLPCIDPYVASAMVELYAKCGCFKEARRVFSSLRDRNTVS 362
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
+ GF +++LF++M + +T D + + I+S CS+ M +Q+H+ ++
Sbjct: 363 WTVLIGGFLQYGCFSESLELFNQMRAELMTVDQFALATIISGCSNRMDMCLARQLHSLSL 422
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHAR------------------LAYKRI-------- 393
+ G+ V I +L+ MYAKCG+L++A AY ++
Sbjct: 423 KSGHTRAVVISNSLISMYAKCGNLQNAESIFSSMEERDIVSWTGMLTAYSQVGNIGKARE 482
Query: 394 -----STPDLVSQNAMLTAYAMHGHGKEGIAHFRRILA-SGFRPDHISFLSALSACVHAG 447
ST ++++ NAML AY HG ++G+ + +L PD +++++ C G
Sbjct: 483 FFDGMSTRNVITWNAMLGAYIQHGAEEDGLKMYSAMLTEKDVIPDWVTYVTLFRGCADMG 542
Query: 448 SIKTGSEFFDLMAYYDVKPSLKHYT----CMVDLLSRAGELGEA---YEFIKKIPMAPDS 500
+ K G D + + VK L T ++ + S+ G + EA ++F+ + D
Sbjct: 543 ANKLG----DQITGHTVKVGLILDTSVMNAVITMYSKCGRISEARKIFDFLSR----KDL 594
Query: 501 VMWGALLGGCVSHG 514
V W A++ G HG
Sbjct: 595 VSWNAMITGYSQHG 608
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 119/488 (24%), Positives = 211/488 (43%), Gaps = 68/488 (13%)
Query: 95 RTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIF-S 153
+ L+ L +C L+ + HG + G S F+ N L+ Y CG + A +
Sbjct: 29 QALADALRSCGARGALAGARALHGRLVSVGLASAVFLQNTLLHAYLSCGALPDARGLLRG 88
Query: 154 KFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDE 213
+ N ++ N ++ GY + G++++A ELF +M +R + SWN+++SGY + + +
Sbjct: 89 DITEPNVITHNIMMNGYAKLGSLSDAEELFGRMP----RRDVTSWNTLMSGYYQSGRFLD 144
Query: 214 AFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALV 273
A F + P +FTFG + +C + ++ L G Q D V +V
Sbjct: 145 AMESFVSMRRSGDSLPNAFTFGCAMKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIV 204
Query: 274 EMYCRYQDLVAAQMAFDEIENI------ENLLGKMKEDGF-----------EPNVYTWNA 316
+M+ R + A F +IE L G K G E +V +WN
Sbjct: 205 DMFVRCGAVDFASKQFSQIERPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNM 264
Query: 317 M-----QLFSEMLSLDLTPDIYTVGI---------ILSACSSLATMERGKQVHAYAIRCG 362
M Q +L + D++ G+ L+AC+ L+++ GKQ+HA IR
Sbjct: 265 MVSALSQSGRAREALSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSL 324
Query: 363 YDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFR 422
D ++ +A+V++YAKCG K AR + + + VS ++ + +G E + F
Sbjct: 325 PCIDPYVASAMVELYAKCGCFKEARRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFN 384
Query: 423 RILASGFRPDHISFLSALSAC-----------VHAGSIKTGSEFF-----DLMAYYDVKP 466
++ A D + + +S C +H+ S+K+G L++ Y
Sbjct: 385 QMRAELMTVDQFALATIISGCSNRMDMCLARQLHSLSLKSGHTRAVVISNSLISMYAKCG 444
Query: 467 SLKH---------------YTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCV 511
+L++ +T M+ S+ G +G+A EF + + + W A+LG +
Sbjct: 445 NLQNAESIFSSMEERDIVSWTGMLTAYSQVGNIGKAREFFDGMS-TRNVITWNAMLGAYI 503
Query: 512 SHGNLEFG 519
HG E G
Sbjct: 504 QHGAEEDG 511
>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 766
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 196/596 (32%), Positives = 312/596 (52%), Gaps = 60/596 (10%)
Query: 8 LDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIG 67
L DA+++F +MPE+D VSWNS+++ A NG V EA E + M N +SW+ ++
Sbjct: 127 LGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPE-----KNSISWNGLLA 181
Query: 68 GFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMS 127
+ NG EEA +LF +++ +S G++ +
Sbjct: 182 AYVHNGRIEEAC-LLFESKSD------------------WDLISWNCLMGGFVRK----- 217
Query: 128 NPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQME 187
++ GD A +F K +++ +S NT+I GY + G +++AR LFD+
Sbjct: 218 ------------KKLGD---ARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDE-- 260
Query: 188 HLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSL 247
R + +W +M+SGYV N + DEA + F ++ ++ + + G V D+
Sbjct: 261 --SPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEVSYNAMIAGYVQTKKMDI--- 315
Query: 248 RKGKEIHALAIALGLQS-DTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDG 306
+E+ + S +T + G Y + D+ A+ FD + + + G
Sbjct: 316 --ARELFESMPCRNISSWNTMITG-----YGQIGDIAQARKFFDMMPQRDCVSWAAIIAG 368
Query: 307 FEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSD 366
+ + + A+ +F E+ + + T G LS C+ +A +E GKQ+H A++ GY +
Sbjct: 369 YAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTG 428
Query: 367 VHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILA 426
+G AL+ MY KCGS+ A ++ I D+VS N ML YA HG G++ + F +
Sbjct: 429 CFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKT 488
Query: 427 SGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELG 485
+G +PD I+ + LSAC H G + G+E+F M Y V P+ KHYTCM+DLL RAG L
Sbjct: 489 AGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLE 548
Query: 486 EAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFA 545
EA + I+ +P P + WGALLG HGN E G+ AA+ + ++EP N+G YV+L+NL+A
Sbjct: 549 EAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYA 608
Query: 546 YAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
+GRW D + R KM+D + K PG SW+E +++IH F D SH E IY ++
Sbjct: 609 ASGRWVDADKMRSKMRDIGVQKVPGYSWVEVQNKIHTFSVGDCSHPEKERIYAYLE 664
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 128/447 (28%), Positives = 220/447 (49%), Gaps = 47/447 (10%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y + G +D+A++VF MPE++ +SWN ++ A NG + EA E S D L+S
Sbjct: 152 YAQNGYVDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWD-----LIS 206
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKE-FHGYI 120
W+ ++GGF + +A + +M +A + ++++ A+ LS + F
Sbjct: 207 WNCLMGGFVRKKKLGDARWLFDKMPVR----DAISWNTMISGYAQGGGLSQARRLFDESP 262
Query: 121 TRNGF----MSNPFVVNGLVDV----------------------YRRCGDMLSALKIFSK 154
TR+ F M + +V NG++D Y + M A ++F
Sbjct: 263 TRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEVSYNAMIAGYVQTKKMDIARELFES 322
Query: 155 FSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEA 214
+N S NT+I GY + G++A+AR+ FD M QR +SW ++I+GY + Y+EA
Sbjct: 323 MPCRNISSWNTMITGYGQIGDIAQARKFFDMMP----QRDCVSWAAIIAGYAQSGHYEEA 378
Query: 215 FSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVE 274
+MF + + +DG TFG L CAD+ +L GK+IH A+ +G + FVG AL+
Sbjct: 379 LNMFVE-IKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLA 437
Query: 275 MYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYT 334
MY + + A F+ IE + + G+ + + A+ +F M + + PD T
Sbjct: 438 MYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEIT 497
Query: 335 VGIILSACSSLATMERGKQVHAYAIRCGY---DSDVHIGTALVDMYAKCGSLKHARLAYK 391
+ +LSACS ++RG + + Y++ Y + H T ++D+ + G L+ A+ +
Sbjct: 498 MVGVLSACSHTGLLDRGTE-YFYSMTKDYGVIPTSKHY-TCMIDLLGRAGRLEEAQDLIR 555
Query: 392 RIS-TPDLVSQNAMLTAYAMHGHGKEG 417
+ P S A+L A +HG+ + G
Sbjct: 556 NMPFQPGAASWGALLGASRIHGNTELG 582
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 104/469 (22%), Positives = 186/469 (39%), Gaps = 39/469 (8%)
Query: 57 PNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEF 116
P+++ W+ I +NG+ + A+ + M ++ + ++++ R K +L +
Sbjct: 47 PDILKWNKAISTHMRNGHCDSALHVFNTMPRR----SSVSYNAMISGYLRNSKFNLARNL 102
Query: 117 HGYITRNGFMSNPFVVNGLVDVYRRC--GDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
+ S ++ G V R C GD A ++F K+ VS N+++ GY +NG
Sbjct: 103 FDQMPERDLFSWNVMLTGYV---RNCRLGD---ARRLFDLMPEKDVVSWNSLLSGYAQNG 156
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTF 234
V EARE+FD M ++ ISWN +++ YV N +EA +F D I
Sbjct: 157 YVDEAREVFDNMP----EKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMG 212
Query: 235 GSVLIACADMNSLRKGKEIHALAIALGLQ-SDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
G V RK K A + + D ++ Y + L A+ FDE
Sbjct: 213 GFV----------RKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESP 262
Query: 294 NIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ 353
+ G+ N A F EM + + +++ M+ ++
Sbjct: 263 TRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEV----SYNAMIAGYVQTKKMDIARE 318
Query: 354 VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGH 413
+ ++ C ++ ++ Y + G + AR + + D VS A++ YA GH
Sbjct: 319 LFE-SMPC---RNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGH 374
Query: 414 GKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTC 473
+E + F I G + +F ALS C +++ G +
Sbjct: 375 YEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNA 434
Query: 474 MVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIA 522
++ + + G + EA + + I D V W +L G HG FG+ A
Sbjct: 435 LLAMYFKCGSIDEANDTFEGIE-EKDVVSWNTMLAGYARHG---FGRQA 479
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 92/202 (45%), Gaps = 18/202 (8%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGS+D+A F+ + E+D VSWN+++ A +G +AL E M + + P+ +
Sbjct: 438 MYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVK-PDEI 496
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKE---- 115
+ V+ + G + + M + G+ P ++ + ++ R +L ++
Sbjct: 497 TMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRN 556
Query: 116 --FHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVG--YC 171
F G + ++G ++ + +M+ F ++ + S +++ Y
Sbjct: 557 MPFQPGAASWGALLGASRIHGNTELGEKAAEMV--------FKMEPQNSGMYVLLSNLYA 608
Query: 172 ENGNVAEARELFDQMEHLGVQR 193
+G +A ++ +M +GVQ+
Sbjct: 609 ASGRWVDADKMRSKMRDIGVQK 630
>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 178/541 (32%), Positives = 291/541 (53%), Gaps = 38/541 (7%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
NL S + ++ GF ++ +L ++ EG EPN T S+L CA L+ GK H
Sbjct: 155 NLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPNMYTFISILKTCASKGDLNEGKAIH 214
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
G + ++G + + N LV+VY +CG A K+F G +
Sbjct: 215 GQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVF---------------------GEIP 253
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
E R ++SW ++I+G+V Y +F +L +G P +TF S+
Sbjct: 254 E--------------RDVVSWTALITGFVAEG-YGSGLRIFNQMLA-EGFNPNMYTFISI 297
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
L +C+ ++ + GK++HA + L + FVG ALV+MY + + L A+ F+ + +
Sbjct: 298 LRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDL 357
Query: 298 LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAY 357
+ G+ + A++ F +M + P+ +T+ LS CS +AT++ G+Q+H+
Sbjct: 358 FAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSM 417
Query: 358 AIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEG 417
AI+ G D+ + +ALVDMYAKCG ++ A + + + + D VS N ++ Y+ HG G +
Sbjct: 418 AIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKA 477
Query: 418 IAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFD-LMAYYDVKPSLKHYTCMVD 476
+ F +L G PD ++F+ LSAC H G I+ G + F+ L Y + P+++HY CMVD
Sbjct: 478 LKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVD 537
Query: 477 LLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGN 536
+L RAG+ E FI+++ + + ++W +LG C HGN+EFG+ AA +L ELEP N
Sbjct: 538 ILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEIDSN 597
Query: 537 YVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEI 596
Y++L+N+FA G W D+ R M R + K PGCSW+E ++H F + D SH + EI
Sbjct: 598 YILLSNMFAAKGMWDDVTNVRALMSTRGVKKEPGCSWVEVNGQVHVFLSHDGSHPKIREI 657
Query: 597 Y 597
+
Sbjct: 658 H 658
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 108/415 (26%), Positives = 179/415 (43%), Gaps = 75/415 (18%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KCGS + A KVF +PERD +V
Sbjct: 235 VYAKCGSANYACKVFGEIPERD------------------------------------VV 258
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A+I GF GY + + +M AEG PN T S+L +C+ L + LGK+ H I
Sbjct: 259 SWTALITGFVAEGYGS-GLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQI 317
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+N N FV LVD+Y + + A IF++ ++ + I+ GY ++G +A
Sbjct: 318 VKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAV 377
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+ F QM+ R+G++P FT S L
Sbjct: 378 KCFIQMQ------------------------------------REGVKPNEFTLASSLSG 401
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C+ + +L G+++H++AI G D FV ALV+MY + + A++ FD + + + +
Sbjct: 402 CSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSW 461
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ-VHAYAI 359
G+ + A++ F ML PD T +LSACS + +E GK+ ++ +
Sbjct: 462 NTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSK 521
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNAMLTAYAMHGH 413
G + +VD+ + G + + T +++ +L A MHG+
Sbjct: 522 IYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGN 576
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 169/382 (44%), Gaps = 13/382 (3%)
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
AR++ ++M VQ+ WN +S EA +F L+ I F F S++
Sbjct: 43 ARQVLEEMPIQDVQQ----WNQKLSSANSPYPLQEAVQLFY-LMRHTRIRLNQFIFASLI 97
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
A A + G+ IHA G +SD + A V MY + Q + F + IENL
Sbjct: 98 SAAASLGDNHYGESIHACVCKYGFESDILISNAFVTMYMKTQSVENGWQFFKAMM-IENL 156
Query: 299 LGKMK-EDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAY 357
+ GF ++ ++L P++YT IL C+S + GK +H
Sbjct: 157 ASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPNMYTFISILKTCASKGDLNEGKAIHGQ 216
Query: 358 AIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEG 417
I+ G + D H+ +LV++YAKCGS +A + I D+VS A++T + G+G G
Sbjct: 217 VIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERDVVSWTALITGFVAEGYGS-G 275
Query: 418 IAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDL 477
+ F ++LA GF P+ +F+S L +C + G + + + + T +VD+
Sbjct: 276 LRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDM 335
Query: 478 LSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTG-N 536
++ L +A ++ + D W ++ G G G+ A I+++ N
Sbjct: 336 YAKNRFLEDAETIFNRL-IKRDLFAWTVIVAGYAQDGQ---GEKAVKCFIQMQREGVKPN 391
Query: 537 YVMLANLFAYAGRWSDLARTRQ 558
LA+ + R + L RQ
Sbjct: 392 EFTLASSLSGCSRIATLDSGRQ 413
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 123/266 (46%), Gaps = 5/266 (1%)
Query: 251 KEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDE--IENIENLLGKMKEDGFE 308
K+I I G+ D+ + +LV +Y + + L A+ +E I++++ K+
Sbjct: 9 KKIIFRVIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSP 68
Query: 309 PNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVH 368
+ A+QLF M + + + ++SA +SL G+ +HA + G++SD+
Sbjct: 69 YPLQ--EAVQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDIL 126
Query: 369 IGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASG 428
I A V MY K S+++ +K + +L S+N +L+ + +G ++L G
Sbjct: 127 ISNAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEG 186
Query: 429 FRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAY 488
F P+ +F+S L C G + G + + P + +V++ ++ G A
Sbjct: 187 FEPNMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYAC 246
Query: 489 EFIKKIPMAPDSVMWGALLGGCVSHG 514
+ +IP D V W AL+ G V+ G
Sbjct: 247 KVFGEIP-ERDVVSWTALITGFVAEG 271
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 91/195 (46%), Gaps = 19/195 (9%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNET-PNL 59
MY KCG ++DA+ VF + RD VSWN+++ + +G +AL+ E M LD T P+
Sbjct: 436 MYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAM--LDEGTVPDE 493
Query: 60 VSWSAVIGGFTQNGYDEEAIGMLFRM-QAEGLEPNARTLSSVLPACARLQKLSLGKEFHG 118
V++ V+ + G EE + + G+ P + ++ R K E
Sbjct: 494 VTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKF---HEVES 550
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGDM----LSALKIFSKFSIKNEVSCNTIIVGYCENG 174
+I SN + ++ + G++ +A+K+ F ++ E+ N I++
Sbjct: 551 FIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKL---FELEPEIDSNYILL-----S 602
Query: 175 NVAEARELFDQMEHL 189
N+ A+ ++D + ++
Sbjct: 603 NMFAAKGMWDDVTNV 617
>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 980
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 196/596 (32%), Positives = 312/596 (52%), Gaps = 60/596 (10%)
Query: 8 LDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIG 67
L DA+++F +MPE+D VSWNS+++ A NG V EA E + M N +SW+ ++
Sbjct: 127 LGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPE-----KNSISWNGLLA 181
Query: 68 GFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMS 127
+ NG EEA +LF +++ +S G++ +
Sbjct: 182 AYVHNGRIEEAC-LLFESKSD------------------WDLISWNCLMGGFVRK----- 217
Query: 128 NPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQME 187
++ GD A +F K +++ +S NT+I GY + G +++AR LFD+
Sbjct: 218 ------------KKLGD---ARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDE-- 260
Query: 188 HLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSL 247
R + +W +M+SGYV N + DEA + F ++ ++ + + G V D+
Sbjct: 261 --SPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEVSYNAMIAGYVQTKKMDI--- 315
Query: 248 RKGKEIHALAIALGLQS-DTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDG 306
+E+ + S +T + G Y + D+ A+ FD + + + G
Sbjct: 316 --ARELFESMPCRNISSWNTMITG-----YGQIGDIAQARKFFDMMPQRDCVSWAAIIAG 368
Query: 307 FEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSD 366
+ + + A+ +F E+ + + T G LS C+ +A +E GKQ+H A++ GY +
Sbjct: 369 YAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTG 428
Query: 367 VHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILA 426
+G AL+ MY KCGS+ A ++ I D+VS N ML YA HG G++ + F +
Sbjct: 429 CFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKT 488
Query: 427 SGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELG 485
+G +PD I+ + LSAC H G + G+E+F M Y V P+ KHYTCM+DLL RAG L
Sbjct: 489 AGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLE 548
Query: 486 EAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFA 545
EA + I+ +P P + WGALLG HGN E G+ AA+ + ++EP N+G YV+L+NL+A
Sbjct: 549 EAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYA 608
Query: 546 YAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
+GRW D + R KM+D + K PG SW+E +++IH F D SH E IY ++
Sbjct: 609 ASGRWVDADKMRSKMRDIGVQKVPGYSWVEVQNKIHTFSVGDCSHPEKERIYAYLE 664
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 128/447 (28%), Positives = 220/447 (49%), Gaps = 47/447 (10%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y + G +D+A++VF MPE++ +SWN ++ A NG + EA E S D L+S
Sbjct: 152 YAQNGYVDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWD-----LIS 206
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKE-FHGYI 120
W+ ++GGF + +A + +M +A + ++++ A+ LS + F
Sbjct: 207 WNCLMGGFVRKKKLGDARWLFDKMPVR----DAISWNTMISGYAQGGGLSQARRLFDESP 262
Query: 121 TRNGF----MSNPFVVNGLVDV----------------------YRRCGDMLSALKIFSK 154
TR+ F M + +V NG++D Y + M A ++F
Sbjct: 263 TRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEVSYNAMIAGYVQTKKMDIARELFES 322
Query: 155 FSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEA 214
+N S NT+I GY + G++A+AR+ FD M QR +SW ++I+GY + Y+EA
Sbjct: 323 MPCRNISSWNTMITGYGQIGDIAQARKFFDMMP----QRDCVSWAAIIAGYAQSGHYEEA 378
Query: 215 FSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVE 274
+MF + + +DG TFG L CAD+ +L GK+IH A+ +G + FVG AL+
Sbjct: 379 LNMFVE-IKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLA 437
Query: 275 MYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYT 334
MY + + A F+ IE + + G+ + + A+ +F M + + PD T
Sbjct: 438 MYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEIT 497
Query: 335 VGIILSACSSLATMERGKQVHAYAIRCGY---DSDVHIGTALVDMYAKCGSLKHARLAYK 391
+ +LSACS ++RG + + Y++ Y + H T ++D+ + G L+ A+ +
Sbjct: 498 MVGVLSACSHTGLLDRGTE-YFYSMTKDYGVIPTSKHY-TCMIDLLGRAGRLEEAQDLIR 555
Query: 392 RIS-TPDLVSQNAMLTAYAMHGHGKEG 417
+ P S A+L A +HG+ + G
Sbjct: 556 NMPFQPGAASWGALLGASRIHGNTELG 582
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 104/469 (22%), Positives = 186/469 (39%), Gaps = 39/469 (8%)
Query: 57 PNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEF 116
P+++ W+ I +NG+ + A+ + M ++ + ++++ R K +L +
Sbjct: 47 PDILKWNKAISTHMRNGHCDSALHVFNTMPRR----SSVSYNAMISGYLRNSKFNLARNL 102
Query: 117 HGYITRNGFMSNPFVVNGLVDVYRRC--GDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
+ S ++ G V R C GD A ++F K+ VS N+++ GY +NG
Sbjct: 103 FDQMPERDLFSWNVMLTGYV---RNCRLGD---ARRLFDLMPEKDVVSWNSLLSGYAQNG 156
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTF 234
V EARE+FD M ++ ISWN +++ YV N +EA +F D I
Sbjct: 157 YVDEAREVFDNMP----EKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMG 212
Query: 235 GSVLIACADMNSLRKGKEIHALAIALGLQ-SDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
G V RK K A + + D ++ Y + L A+ FDE
Sbjct: 213 GFV----------RKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESP 262
Query: 294 NIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ 353
+ G+ N A F EM + + +++ M+ ++
Sbjct: 263 TRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEV----SYNAMIAGYVQTKKMDIARE 318
Query: 354 VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGH 413
+ ++ C ++ ++ Y + G + AR + + D VS A++ YA GH
Sbjct: 319 LFE-SMPC---RNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGH 374
Query: 414 GKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTC 473
+E + F I G + +F ALS C +++ G +
Sbjct: 375 YEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNA 434
Query: 474 MVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIA 522
++ + + G + EA + + I D V W +L G HG FG+ A
Sbjct: 435 LLAMYFKCGSIDEANDTFEGIE-EKDVVSWNTMLAGYARHG---FGRQA 479
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 65/145 (44%), Gaps = 39/145 (26%)
Query: 440 LSACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAP 498
L ++ G + TG+E+F M Y V P+ KHYTCM+DLL R L E
Sbjct: 771 LLVVIYTGLLDTGAEYFYPMNEEYSVTPTSKHYTCMIDLLGRVDRLEE------------ 818
Query: 499 DSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQ 558
GALLG HGN E G+ AA ++ P N+G
Sbjct: 819 -----GALLGASRIHGNTELGEKAAQMFFKMGPQNSG---------------------IS 852
Query: 559 KMKDRRMHKSPGCSWIEDRDEIHKF 583
KM+D + K PG SW E +++IH F
Sbjct: 853 KMRDVGVQKVPGYSWFEVQNKIHTF 877
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 92/202 (45%), Gaps = 18/202 (8%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGS+D+A F+ + E+D VSWN+++ A +G +AL E M + + P+ +
Sbjct: 438 MYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVK-PDEI 496
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKE---- 115
+ V+ + G + + M + G+ P ++ + ++ R +L ++
Sbjct: 497 TMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRN 556
Query: 116 --FHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVG--YC 171
F G + ++G ++ + +M+ F ++ + S +++ Y
Sbjct: 557 MPFQPGAASWGALLGASRIHGNTELGEKAAEMV--------FKMEPQNSGMYVLLSNLYA 608
Query: 172 ENGNVAEARELFDQMEHLGVQR 193
+G +A ++ +M +GVQ+
Sbjct: 609 ASGRWVDADKMRSKMRDIGVQK 630
>gi|110289149|gb|ABB47711.2| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 697
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 183/513 (35%), Positives = 274/513 (53%), Gaps = 36/513 (7%)
Query: 85 MQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGD 144
+ A L R S++ ACAR + L + H ++ + F + F+ N L+ +Y +C
Sbjct: 55 VDARELAATPRLYHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKC-- 112
Query: 145 MLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISG 204
G VA+AR +FD M R + SW S+I+G
Sbjct: 113 -----------------------------GAVADARRVFDGMP----ARDMCSWTSLIAG 139
Query: 205 YVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQS 264
Y N + DEA + +L R +P FTF S+L A S G++IHAL +
Sbjct: 140 YAQNDMPDEALGLLPGML-RGRFKPNGFTFASLLKAAGASASSGIGEQIHALTVKYDWHD 198
Query: 265 DTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEML 324
D +VG AL++MY R + A FD++E+ + GF + +F+EM
Sbjct: 199 DVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQ 258
Query: 325 SLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLK 384
+T + SA + + +E+GK VHA+ I+ G +G ++DMYAK GS+
Sbjct: 259 RNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMI 318
Query: 385 HARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACV 444
AR + R+ D+V+ N+MLTA+A +G G+E + HF + G + I+FLS L+AC
Sbjct: 319 DARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACS 378
Query: 445 HAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWG 504
H G +K G ++FD+M Y+++P + HY +VDLL RAG L +A FI K+PM P + +WG
Sbjct: 379 HGGLVKEGKQYFDMMKEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWG 438
Query: 505 ALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRR 564
ALLG C H N + GQ AAD + EL+P++TG V+L N++A G+W AR R+ MK
Sbjct: 439 ALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQWDAAARVRKMMKATG 498
Query: 565 MHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
+ K P CSW+E + +H F A+D +H RSEEIY
Sbjct: 499 VKKEPACSWVEIENSVHMFVANDDTHPRSEEIY 531
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 103/418 (24%), Positives = 173/418 (41%), Gaps = 73/418 (17%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KCG++ DA++VF MP RD +
Sbjct: 108 LYCKCGAVADARRVFDGMPARD------------------------------------MC 131
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+++I G+ QN +EA+G+L M +PN T +S+L A +G++ H
Sbjct: 132 SWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHALT 191
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ + + +V + L+D+Y RCG M A+ +F + KN VS N +I G+ G+
Sbjct: 192 VKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTL 251
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+F +M+ R+G E T FT+ SV A
Sbjct: 252 LMFAEMQ------------------------------------RNGFEATHFTYSSVFSA 275
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
A + +L +GK +HA I G + FVG +++MY + ++ A+ FD ++ + +
Sbjct: 276 IAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTW 335
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
F A+ F EM + + T IL+ACS ++ GKQ
Sbjct: 336 NSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKE 395
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARL-AYKRISTPDLVSQNAMLTAYAMHGHGKEG 417
+ ++ +VD+ + G L A + +K P A+L + MH + K G
Sbjct: 396 YNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALLGSCRMHKNAKIG 453
>gi|224115126|ref|XP_002332220.1| predicted protein [Populus trichocarpa]
gi|222831877|gb|EEE70354.1| predicted protein [Populus trichocarpa]
Length = 673
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 189/614 (30%), Positives = 323/614 (52%), Gaps = 86/614 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KCG + +A+KVF +P R N+V
Sbjct: 24 VYAKCGVMVNARKVFDNLPRR------------------------------------NVV 47
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
W+ ++ G+ QN E A+ + M G P+ TLS L AC+ L+ ++LGK+FH +I
Sbjct: 48 VWTTLMTGYVQNSQPEVAVEVFGDMLESGSFPSNFTLSIALNACSSLESITLGKQFHAFI 107
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ + + N L +Y + G + S++K F E G
Sbjct: 108 IKYRISHDSSIGNALCSLYSKFGSLDSSVKAFR------------------ETG------ 143
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
++ +ISW ++IS DN +F ++L + +EP FT SVL
Sbjct: 144 -----------EKDVISWTTIISACGDNGRAGMGLRLFIEMLF-ENVEPNDFTLTSVLSL 191
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C+ + S G ++H+L+ LG +S+ + +LV +Y + + A+ F+ +E +NL+
Sbjct: 192 CSTIQSSDLGMQVHSLSTKLGHESNLRITNSLVYLYLKCGCIDEAKNLFNRME-YKNLIT 250
Query: 301 ------------KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATM 348
+ +D F A+ ++ ++ PD++T+ IL+ CS LA +
Sbjct: 251 WNAMIAGHAQAMDLAKDNFSAQQTGTEALGMYLKLNRSGRKPDLFTLSSILTVCSRLAAL 310
Query: 349 ERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAY 408
E+G+Q+HA I+ G+ SDV +GTALVDMY KCGS++ AR A+ +ST L+S +M+T++
Sbjct: 311 EQGEQIHAQTIKSGFLSDVVVGTALVDMYDKCGSIERARKAFLDMSTRTLISWTSMITSF 370
Query: 409 AMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPS 467
A HG + + F + +GFRP+ I+F+ L+AC HAG + E+F++M Y +KP
Sbjct: 371 ARHGQSQHALQLFEDMRLAGFRPNQITFVGVLAACSHAGMVDEALEYFEIMQKEYKIKPV 430
Query: 468 LKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLI 527
+ HY C+VD+ R G L EA++ IK++ + P+ +W L+ GC +HGN E G AA++L+
Sbjct: 431 MDHYGCLVDMFVRLGRLDEAFDVIKRMDVEPNEFIWLLLIAGCRNHGNEELGFYAAEQLL 490
Query: 528 ELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASD 587
+L+P +T YV+L N++ A RW D++ R+ MK+ ++ K S I + E+H F+ ++
Sbjct: 491 KLKPRSTETYVVLLNMYISAERWEDVSMVRRLMKEEKVGKLKDWSRISIKGEVHSFKTNN 550
Query: 588 RSHDRSEEIYTIID 601
R H+ + E++T+++
Sbjct: 551 RLHNHNAELHTLLN 564
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 118/257 (45%), Gaps = 1/257 (0%)
Query: 253 IHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVY 312
+HA I G + FV LV +Y + +V A+ FD + ++ G+ N
Sbjct: 2 VHAHVIKTGTHEEFFVMSFLVNVYAKCGVMVNARKVFDNLPRRNVVVWTTLMTGYVQNSQ 61
Query: 313 TWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTA 372
A+++F +ML P +T+ I L+ACSSL ++ GKQ HA+ I+ D IG A
Sbjct: 62 PEVAVEVFGDMLESGSFPSNFTLSIALNACSSLESITLGKQFHAFIIKYRISHDSSIGNA 121
Query: 373 LVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPD 432
L +Y+K GSL + A++ D++S +++A +G G+ F +L P+
Sbjct: 122 LCSLYSKFGSLDSSVKAFRETGEKDVISWTTIISACGDNGRAGMGLRLFIEMLFENVEPN 181
Query: 433 HISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIK 492
+ S LS C S G + L + +L+ +V L + G + EA
Sbjct: 182 DFTLTSVLSLCSTIQSSDLGMQVHSLSTKLGHESNLRITNSLVYLYLKCGCIDEAKNLFN 241
Query: 493 KIPMAPDSVMWGALLGG 509
++ + + W A++ G
Sbjct: 242 RMEY-KNLITWNAMIAG 257
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/301 (20%), Positives = 118/301 (39%), Gaps = 61/301 (20%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGS++ A+K F LD T L+
Sbjct: 338 MYDKCGSIERARKAF------------------------------------LDMSTRTLI 361
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+++I F ++G + A+ + M+ G PN T VL AC+ + E+ I
Sbjct: 362 SWTSMITSFARHGQSQHALQLFEDMRLAGFRPNQITFVGVLAACSHAGMVDEALEYFE-I 420
Query: 121 TRNGFMSNPFV--VNGLVDVYRRCGDMLSALKIFSKFSIK-NEVSCNTIIVGYCENGNVA 177
+ + P + LVD++ R G + A + + ++ NE +I G +GN
Sbjct: 421 MQKEYKIKPVMDHYGCLVDMFVRLGRLDEAFDVIKRMDVEPNEFIWLLLIAGCRNHGNEE 480
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
+Q+ L R ++ +++ Y+ +++ SM R L+ + +
Sbjct: 481 LGFYAAEQLLKLK-PRSTETYVVLLNMYISAERWEDV-SMVRRLMKEEKVGKLK------ 532
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLV--AAQMAFDEIENI 295
D + + E+H+ L + E++ DLV A + ++++EN+
Sbjct: 533 -----DWSRISIKGEVHSFKTNNRLHNHN------AELHTLLNDLVDRAKSLGYEQLENM 581
Query: 296 E 296
E
Sbjct: 582 E 582
>gi|359497788|ref|XP_002273247.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 580
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 189/557 (33%), Positives = 291/557 (52%), Gaps = 41/557 (7%)
Query: 81 MLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYR 140
M+ L+P + SS++ C + L LGK H + + + F+ N L+D Y
Sbjct: 1 MVLNETLSSLDPAHQHYSSLISKCITTRHLKLGKLLHSHFIKTALIFTTFLANRLIDFYS 60
Query: 141 RCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNS 200
+C + SA K+F +KN S N II Y +G EA L DQM + ++S+NS
Sbjct: 61 KCDSIQSAHKVFHVLPVKNTHSWNIIISAYSRSGLFNEAHNLLDQMP----KPNLVSYNS 116
Query: 201 MISGYVDNSLYDEAFSMFRDLLMR-DGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIA 259
+ISG + E+ ++F+ +L + + FT S++ +CA + + +++H AI
Sbjct: 117 LISGLGHHGFRKESLNVFKTMLKQCSNVLFDEFTLVSLVGSCASLGAPELLRQVHGAAII 176
Query: 260 LGLQSDTFVGGALVEMYCR---------------------YQDLVAAQMAFDEIENIENL 298
+GL S+ +G AL++ Y + + +VAA +E+ L
Sbjct: 177 IGLNSNIIIGNALIDAYGKCGEPDISFSIFSRMPERDVVSWTSMVAAYAQASRLEDAHWL 236
Query: 299 LGKMKED----------GFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATM 348
+M+E GF N A+ LF +M + P +T +LSAC+ LA +
Sbjct: 237 FSQMQEKNTVSWTALIAGFAQNGRGDEALHLFEQMREEGIPPSAFTFASVLSACADLALI 296
Query: 349 ERGKQVHAYAIRCG---YDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAML 405
RGK++H + IR Y ++ I AL+DMY KCG ++ A +K + D+VS N+++
Sbjct: 297 ARGKEIHGHIIRSTCIDYFCNIFILNALIDMYCKCGQMRSATTLFKGMHEKDIVSWNSLI 356
Query: 406 TAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDV 464
T +A +GHG+E +A F R++ + RP+H++FL LSAC H G + G D M Y V
Sbjct: 357 TGFAQNGHGEESLAVFERMIEADIRPNHVTFLGLLSACCHTGLVSEGLRILDSMEKDYGV 416
Query: 465 KPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSV-MWGALLGGCVSHGNLEFGQIAA 523
P HY M+DLL R L EA IK+ P D V MWGALLG C HGN++ + AA
Sbjct: 417 CPRSDHYAIMIDLLGRNNRLEEAMGLIKRAPKGSDHVGMWGALLGACRIHGNMDLARRAA 476
Query: 524 DRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKF 583
+ L +LEP N YVM+ N++A A RW + + R+ M +R + K CSWIE R+ H+F
Sbjct: 477 EVLFQLEPGNAARYVMVYNIYAAASRWDEARQVRRLMMERGLRKEAACSWIEVRNTRHQF 536
Query: 584 RASDRSHDRSEEIYTII 600
A +RSH + E+Y +I
Sbjct: 537 VAKERSHCQINEVYEVI 553
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 108/358 (30%), Positives = 189/358 (52%), Gaps = 15/358 (4%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y KC S+ A KVF ++P ++ SWN +++A + +GL EA L++M PNLVS
Sbjct: 59 YSKCDSIQSAHKVFHVLPVKNTHSWNIIISAYSRSGLFNEAHNLLDQMPK-----PNLVS 113
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRM--QAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
++++I G +G+ +E++ + M Q + + TL S++ +CA L L ++ HG
Sbjct: 114 YNSLISGLGHHGFRKESLNVFKTMLKQCSNVLFDEFTLVSLVGSCASLGAPELLRQVHGA 173
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
G SN + N L+D Y +CG+ + IFS+ ++ VS +++ Y + + +A
Sbjct: 174 AIIIGLNSNIIIGNALIDAYGKCGEPDISFSIFSRMPERDVVSWTSMVAAYAQASRLEDA 233
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
LF QM+ ++ +SW ++I+G+ N DEA +F + +GI P++FTF SVL
Sbjct: 234 HWLFSQMQ----EKNTVSWTALIAGFAQNGRGDEALHLFEQ-MREEGIPPSAFTFASVLS 288
Query: 240 ACADMNSLRKGKEIHALAI---ALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
ACAD+ + +GKEIH I + + F+ AL++MYC+ + +A F + +
Sbjct: 289 ACADLALIARGKEIHGHIIRSTCIDYFCNIFILNALIDMYCKCGQMRSATTLFKGMHEKD 348
Query: 297 NLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV 354
+ GF N + ++ +F M+ D+ P+ T +LSAC + G ++
Sbjct: 349 IVSWNSLITGFAQNGHGEESLAVFERMIEADIRPNHVTFLGLLSACCHTGLVSEGLRI 406
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 83/233 (35%), Positives = 131/233 (56%), Gaps = 8/233 (3%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
YGKCG D + +F MPERD VSW S+V A A + +A +M + N VS
Sbjct: 193 YGKCGEPDISFSIFSRMPERDVVSWTSMVAAYAQASRLEDAHWLFSQM-----QEKNTVS 247
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W+A+I GF QNG +EA+ + +M+ EG+ P+A T +SVL ACA L ++ GKE HG+I
Sbjct: 248 WTALIAGFAQNGRGDEALHLFEQMREEGIPPSAFTFASVLSACADLALIARGKEIHGHII 307
Query: 122 RNG---FMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
R+ + N F++N L+D+Y +CG M SA +F K+ VS N++I G+ +NG+ E
Sbjct: 308 RSTCIDYFCNIFILNALIDMYCKCGQMRSATTLFKGMHEKDIVSWNSLITGFAQNGHGEE 367
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTS 231
+ +F++M ++ +++ ++S L E + + G+ P S
Sbjct: 368 SLAVFERMIEADIRPNHVTFLGLLSACCHTGLVSEGLRILDSMEKDYGVCPRS 420
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 77/161 (47%), Gaps = 15/161 (9%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG + A +FK M E+D VSWNS++T A NG E+L ERM D PN V
Sbjct: 327 MYCKCGQMRSATTLFKGMHEKDIVSWNSLITGFAQNGHGEESLAVFERMIEADIR-PNHV 385
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
++ ++ G E + +L M+ + G+ P + + ++ R +L +E G
Sbjct: 386 TFLGLLSACCHTGLVSEGLRILDSMEKDYGVCPRSDHYAIMIDLLGRNNRL---EEAMGL 442
Query: 120 ITRN----------GFMSNPFVVNGLVDVYRRCGDMLSALK 150
I R G + ++G +D+ RR ++L L+
Sbjct: 443 IKRAPKGSDHVGMWGALLGACRIHGNMDLARRAAEVLFQLE 483
>gi|356558231|ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 1135
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 191/585 (32%), Positives = 302/585 (51%), Gaps = 90/585 (15%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
+LVSW+ VI +QN EEA+ ++ M +G+ P+ TL+SVLPAC++L++L +G+E H
Sbjct: 498 DLVSWNTVISSLSQNDRFEEALMYVYLMIVDGVRPDGVTLASVLPACSQLERLRIGREIH 557
Query: 118 GYITRNG-FMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNV 176
Y RNG + N FV LVD+Y C
Sbjct: 558 CYALRNGDLIENSFVGTALVDMY-------------------------------CNCKQP 586
Query: 177 AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGS 236
+ R +FD + V+R + WN++++GY N D+A +F +++ P + TF S
Sbjct: 587 KKGRLVFDGV----VRRTVAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFAS 642
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
VL AC + IH + G D +V AL++MY R +E +
Sbjct: 643 VLPACVRCKVFSDKEGIHGYIVKRGFGKDKYVQNALMDMYSR----------MGRVEISK 692
Query: 297 NLLGKMKEDGFEPNVYTWN--------------AMQLFSEML------------------ 324
+ G+M + ++ +WN A+ L EM
Sbjct: 693 TIFGRMNKR----DIVSWNTMITGCIVCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDG 748
Query: 325 SLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLK 384
+ P+ T+ +L C++LA + +GK++HAYA++ DV +G+ALVDMYAKCG L
Sbjct: 749 GVPFKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQKLAMDVAVGSALVDMYAKCGCLN 808
Query: 385 HARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASG------FRPDHISFLS 438
A + ++ ++++ N ++ AY MHG G+E + FR + A G RP+ +++++
Sbjct: 809 LASRVFDQMPIRNVITWNVLIMAYGMHGKGEEALELFRIMTAGGGSNREVIRPNEVTYIA 868
Query: 439 ALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMA 497
+AC H+G + G F M A + V+P HY C+VDLL R+G + EAYE I +P
Sbjct: 869 IFAACSHSGMVDEGLHLFHTMKASHGVEPRGDHYACLVDLLGRSGRVKEAYELINTMPSN 928
Query: 498 PDSV-MWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLART 556
+ V W +LLG C H ++EFG+IAA L LEPN +YV+++N+++ AG W
Sbjct: 929 LNKVDAWSSLLGACRIHQSVEFGEIAAKHLFVLEPNVASHYVLMSNIYSSAGLWDQALGV 988
Query: 557 RQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
R+KMK+ + K PGCSWIE DE+HKF + D SH +S+E++ ++
Sbjct: 989 RKKMKEMGVRKEPGCSWIEHGDEVHKFLSGDASHPQSKELHEYLE 1033
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 143/541 (26%), Positives = 238/541 (43%), Gaps = 101/541 (18%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVV-TACAANGLVLEALECLERMSSLDNETPNL 59
MYGKCG L A++VF +P+RD VSWNS++ T C
Sbjct: 376 MYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLCR------------------------- 410
Query: 60 VSWSAVIGGFTQNGYDEEAIGM-LFR-MQAEGLEPNARTLSSVLPACARLQK-LSLGKEF 116
++E + + LFR M +E ++P + TL SV AC+ ++ + LGK+
Sbjct: 411 --------------FEEWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQV 456
Query: 117 HGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNV 176
H Y RNG + + N LV +Y R G + A +F F K+ VS NT+
Sbjct: 457 HAYTLRNGDLRT-YTNNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTV---------- 505
Query: 177 AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGS 236
IS N ++EA M+ L++ DG+ P T S
Sbjct: 506 -------------------------ISSLSQNDRFEEAL-MYVYLMIVDGVRPDGVTLAS 539
Query: 237 VLIACADMNSLRKGKEIHALAIALG-LQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
VL AC+ + LR G+EIH A+ G L ++FVG ALV+MYC + ++ FD +
Sbjct: 540 VLPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPKKGRLVFDGVVRR 599
Query: 296 ENLLGKMKEDGFEPNVYTWNAMQLFSEMLS-LDLTPDIYTVGIILSACSSLATMERGKQV 354
+ G+ N + A++LF EM+S + P+ T +L AC + +
Sbjct: 600 TVAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPACVRCKVFSDKEGI 659
Query: 355 HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHG-- 412
H Y ++ G+ D ++ AL+DMY++ G ++ ++ + R++ D+VS N M+T + G
Sbjct: 660 HGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIVSWNTMITGCIVCGRY 719
Query: 413 -------------HGKEGIAHFRRILASG---FRPDHISFLSALSACVHAGSIKTGSEFF 456
G++G F G F+P+ ++ ++ L C ++ G E
Sbjct: 720 DDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCAALAALGKGKEIH 779
Query: 457 DLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNL 516
+ + + +VD+ ++ G L A ++P+ + + W L+ HG
Sbjct: 780 AYAVKQKLAMDVAVGSALVDMYAKCGCLNLASRVFDQMPIR-NVITWNVLIMAYGMHGKG 838
Query: 517 E 517
E
Sbjct: 839 E 839
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 114/235 (48%), Gaps = 24/235 (10%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY + G ++ +K +F M +RD VSWN+++T C G +AL L M E
Sbjct: 681 MYSRMGRVEISKTIFGRMNKRDIVSWNTMITGCIVCGRYDDALNLLHEMQRRQGED---- 736
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
G T Y+++ G+ F+ PN+ TL +VLP CA L L GKE H Y
Sbjct: 737 ------GSDTFVDYEDDG-GVPFK-------PNSVTLMTVLPGCAALAALGKGKEIHAYA 782
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ + V + LVD+Y +CG + A ++F + I+N ++ N +I+ Y +G EA
Sbjct: 783 VKQKLAMDVAVGSALVDMYAKCGCLNLASRVFDQMPIRNVITWNVLIMAYGMHGKGEEAL 842
Query: 181 ELFDQMEHLG------VQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEP 229
ELF M G ++ +++ ++ + + + DE +F + G+EP
Sbjct: 843 ELFRIMTAGGGSNREVIRPNEVTYIAIFAACSHSGMVDEGLHLFHTMKASHGVEP 897
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 130/281 (46%), Gaps = 33/281 (11%)
Query: 192 QRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGK 251
+R W ++ +S + +A S + +L +F F +VL A A ++ L GK
Sbjct: 292 RRSPSQWIDLLRSQTHSSSFRDAISTYAAMLAAPAPP-DNFAFPAVLKAAAAVHDLCLGK 350
Query: 252 EIHALAIALG--LQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEP 309
+IHA G S V +LV MY + DL AA+ FD+I + +++
Sbjct: 351 QIHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHV----------- 399
Query: 310 NVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSSLATMER-GKQV 354
+WN+M LF MLS ++ P +T+ + ACS + R GKQV
Sbjct: 400 ---SWNSMIATLCRFEEWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQV 456
Query: 355 HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHG 414
HAY +R G D + ALV MYA+ G + A+ + DLVS N ++++ + +
Sbjct: 457 HAYTLRNG-DLRTYTNNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRF 515
Query: 415 KEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEF 455
+E + + ++ G RPD ++ S L AC ++ G E
Sbjct: 516 EEALMYVYLMIVDGVRPDGVTLASVLPACSQLERLRIGREI 556
>gi|356519887|ref|XP_003528600.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 813
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 194/588 (32%), Positives = 300/588 (51%), Gaps = 73/588 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+YGKCGS +KKVF + ER N++
Sbjct: 285 VYGKCGSEKASKKVFDEIDER------------------------------------NVI 308
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A+I F+ G +A+ + M EG+ PN+ T+SS+LP L LG E HG+
Sbjct: 309 SWNAIITSFSFRGKYMDALDVFRLMIDEGMRPNSVTISSMLPVLGELGLFKLGMEVHGFS 368
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ S+ F+ N L+D+Y + G A IF+K +
Sbjct: 369 LKMAIESDVFISNSLIDMYAKSGSSRIASTIFNKMGV----------------------- 405
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
R I+SWN+MI+ + N L EA + R + + G P + TF +VL A
Sbjct: 406 ------------RNIVSWNAMIANFARNRLEYEAVELVRQMQAK-GETPNNVTFTNVLPA 452
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA + L GKEIHA I +G D FV AL +MY + L AQ F+ I + +
Sbjct: 453 CARLGFLNVGKEIHARIIRVGSSLDLFVSNALTDMYSKCGCLNLAQNVFN-ISVRDEVSY 511
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
+ G+ + +++LFSEM L + PDI + ++SAC++LA + +GK++H +R
Sbjct: 512 NILIIGYSRTNDSLESLRLFSEMRLLGMRPDIVSFMGVVSACANLAFIRQGKEIHGLLVR 571
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
+ + + + +L+D+Y +CG + A + I D+ S N M+ Y M G I
Sbjct: 572 KLFHTHLFVANSLLDLYTRCGRIDLATKVFYCIQNKDVASWNTMILGYGMRGELDTAINL 631
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSR 480
F + G D +SF++ LSAC H G I+ G ++F +M +++P+ HY CMVDLL R
Sbjct: 632 FEAMKEDGVEYDSVSFVAVLSACSHGGLIEKGRKYFKMMCDLNIEPTHTHYACMVDLLGR 691
Query: 481 AGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVML 540
AG + EA + I+ + + PD+ +WGALLG C HGN+E G AA+ L EL+P + G Y++L
Sbjct: 692 AGLMEEAADLIRGLSIIPDTNIWGALLGACRIHGNIELGLWAAEHLFELKPQHCGYYILL 751
Query: 541 ANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDR 588
+N++A A RW + + R+ MK R K+PGCSW++ D +H F ++
Sbjct: 752 SNMYAEAERWDEANKVRELMKSRGAKKNPGCSWVQVGDLVHAFLVGEK 799
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 112/427 (26%), Positives = 186/427 (43%), Gaps = 65/427 (15%)
Query: 77 EAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLV 136
+ G M G++P+ T VL C+ ++ G+E HG + GF + FV N L+
Sbjct: 120 DGFGTYNTMVRAGVKPDECTYPFVLKVCSDFVEVRKGREVHGVAFKLGFDGDVFVGNTLL 179
Query: 137 DVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGII 196
Y CG A+K+ FD+M +R +
Sbjct: 180 AFYGNCGLFGDAMKV-------------------------------FDEMP----ERDKV 204
Query: 197 SWNSMISGYVDNSLYDEAFSMFRDLLM-RDGIEPTSFTFGSVLIACADMNSLRKGKEIHA 255
SWN++I + Y+EA FR ++ + GI+P T SVL CA+ + +H
Sbjct: 205 SWNTVIGLCSLHGFYEEALGFFRVMVAAKPGIQPDLVTVVSVLPVCAETEDKVMARIVHC 264
Query: 256 LAIALGLQSDTF-VGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTW 314
A+ +GL VG ALV++Y + A++ FDEI+ E NV +W
Sbjct: 265 YALKVGLLGGHVKVGNALVDVYGKCGSEKASKKVFDEID--------------ERNVISW 310
Query: 315 NA--------------MQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
NA + +F M+ + P+ T+ +L L + G +VH ++++
Sbjct: 311 NAIITSFSFRGKYMDALDVFRLMIDEGMRPNSVTISSMLPVLGELGLFKLGMEVHGFSLK 370
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
+SDV I +L+DMYAK GS + A + ++ ++VS NAM+ +A + E +
Sbjct: 371 MAIESDVFISNSLIDMYAKSGSSRIASTIFNKMGVRNIVSWNAMIANFARNRLEYEAVEL 430
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSR 480
R++ A G P++++F + L AC G + G E + L + D+ S+
Sbjct: 431 VRQMQAKGETPNNVTFTNVLPACARLGFLNVGKEIHARIIRVGSSLDLFVSNALTDMYSK 490
Query: 481 AGELGEA 487
G L A
Sbjct: 491 CGCLNLA 497
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 111/454 (24%), Positives = 200/454 (44%), Gaps = 30/454 (6%)
Query: 110 LSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSI------KNEVSC 163
L+ F + + + SNP L+ + C D LS K +S+ ++ C
Sbjct: 18 LTKNTHFSSFFSTSLQTSNP---PNLLQLCTLC-DTLSQTKQVHAYSLLHGFLPRSVSLC 73
Query: 164 NTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLM 223
++I+ Y G+ + + LF + R WN++I ++D F + + ++
Sbjct: 74 ASLILQYASFGHPSNSLLLFQH--SVAYSRSAFLWNTLIRANSIAGVFD-GFGTY-NTMV 129
Query: 224 RDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLV 283
R G++P T+ VL C+D +RKG+E+H +A LG D FVG L+ Y
Sbjct: 130 RAGVKPDECTYPFVLKVCSDFVEVRKGREVHGVAFKLGFDGDVFVGNTLLAFYGNCGLFG 189
Query: 284 AAQMAFDEIENIE-----NLLGKMKEDGFEPNVYTWNAMQLFSEMLSLD--LTPDIYTVG 336
A FDE+ + ++G GF A+ F M++ + PD+ TV
Sbjct: 190 DAMKVFDEMPERDKVSWNTVIGLCSLHGFYE-----EALGFFRVMVAAKPGIQPDLVTVV 244
Query: 337 IILSACSSLATMERGKQVHAYAIRCG-YDSDVHIGTALVDMYAKCGSLKHARLAYKRIST 395
+L C+ + VH YA++ G V +G ALVD+Y KCGS K ++ + I
Sbjct: 245 SVLPVCAETEDKVMARIVHCYALKVGLLGGHVKVGNALVDVYGKCGSEKASKKVFDEIDE 304
Query: 396 PDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEF 455
+++S NA++T+++ G + + FR ++ G RP+ ++ S L G K G E
Sbjct: 305 RNVISWNAIITSFSFRGKYMDALDVFRLMIDEGMRPNSVTISSMLPVLGELGLFKLGMEV 364
Query: 456 FDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
++ + ++D+ +++G A K+ + + V W A++ +
Sbjct: 365 HGFSLKMAIESDVFISNSLIDMYAKSGSSRIASTIFNKMGVR-NIVSWNAMIAN-FARNR 422
Query: 516 LEFGQIAADRLIELEPNNTGNYVMLANLFAYAGR 549
LE+ + R ++ + T N V N+ R
Sbjct: 423 LEYEAVELVRQMQAK-GETPNNVTFTNVLPACAR 455
>gi|15222566|ref|NP_173907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75172213|sp|Q9FRI5.1|PPR57_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g25360
gi|11067273|gb|AAG28801.1|AC079374_4 hypothetical protein [Arabidopsis thaliana]
gi|332192491|gb|AEE30612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 790
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 208/639 (32%), Positives = 329/639 (51%), Gaps = 49/639 (7%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y K L+ A+++F + E D ++ ++V+ A+G + A E+ +T V
Sbjct: 58 VYCKSSELNYARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDT---V 114
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARL---QKLSLGKEFH 117
++A+I GF+ N AI + +M+ EG +P+ T +SVL A + +K + +FH
Sbjct: 115 MYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCV--QFH 172
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGD----MLSALKIFSKFSIKNEVSCNTIIVGYCEN 173
++G V N LV VY +C + SA K+F + K+E S T++ GY +N
Sbjct: 173 AAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKN 232
Query: 174 GNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFT 233
G EL + M+ ++++N+MISGYV+ Y EA M R ++ GIE FT
Sbjct: 233 GYFDLGEELLEGMDD---NMKLVAYNAMISGYVNRGFYQEALEMVRRMV-SSGIELDEFT 288
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCR--------------- 278
+ SV+ ACA L+ GK++HA + S F +LV +Y +
Sbjct: 289 YPSVIRACATAGLLQLGKQVHAYVLRREDFSFHF-DNSLVSLYYKCGKFDEARAIFEKMP 347
Query: 279 YQDLVA----------------AQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSE 322
+DLV+ A++ F E++ L + G N + ++LFS
Sbjct: 348 AKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSC 407
Query: 323 MLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGS 382
M P Y + +C+ L G+Q HA ++ G+DS + G AL+ MYAKCG
Sbjct: 408 MKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGV 467
Query: 383 LKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSA 442
++ AR ++ + D VS NA++ A HGHG E + + +L G RPD I+ L+ L+A
Sbjct: 468 VEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTA 527
Query: 443 CVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSV 501
C HAG + G ++FD M Y + P HY ++DLL R+G+ +A I+ +P P +
Sbjct: 528 CSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAE 587
Query: 502 MWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMK 561
+W ALL GC HGN+E G IAAD+L L P + G Y++L+N+ A G+W ++AR R+ M+
Sbjct: 588 IWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMR 647
Query: 562 DRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTII 600
DR + K CSWIE ++H F D SH +E +Y +
Sbjct: 648 DRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYL 686
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 127/490 (25%), Positives = 217/490 (44%), Gaps = 75/490 (15%)
Query: 94 ARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFS 153
A L LP R L L + HG I GF ++N L+DVY + ++ A ++F
Sbjct: 16 AANLRLCLPL--RRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFD 73
Query: 154 KFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDE 213
+ S ++++ T++ GYC +G++ AR +F++ R + +N+MI+G+ N+
Sbjct: 74 EISEPDKIARTTMVSGYCASGDITLARGVFEKAP--VCMRDTVMYNAMITGFSHNNDGYS 131
Query: 214 AFSMFRDLLMRDGIEPTSFTFGSVLIACADM-NSLRKGKEIHALAIALGLQSDTFVGGAL 272
A ++F + +G +P +FTF SVL A + + ++ + HA A+ G T V AL
Sbjct: 132 AINLFCK-MKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNAL 190
Query: 273 VEMYCRYQD----LVAAQMAFDEI-------------------------ENIENLLGKMK 303
V +Y + L +A+ FDEI E +E + MK
Sbjct: 191 VSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMK 250
Query: 304 E-------DGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHA 356
G+ + A+++ M+S + D +T ++ AC++ ++ GKQVHA
Sbjct: 251 LVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHA 310
Query: 357 YAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGH--- 413
Y +R D H +LV +Y KCG AR ++++ DLVS NA+L+ Y GH
Sbjct: 311 YVLR-REDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGE 369
Query: 414 ----------------------------GKEGIAHFRRILASGFRPDHISFLSALSACVH 445
G+EG+ F + GF P +F A+ +C
Sbjct: 370 AKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAV 429
Query: 446 AGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGA 505
G+ G ++ + SL ++ + ++ G + EA + + +P DSV W A
Sbjct: 430 LGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMP-CLDSVSWNA 488
Query: 506 LLGGCVSHGN 515
L+ HG+
Sbjct: 489 LIAALGQHGH 498
>gi|297740109|emb|CBI30291.3| unnamed protein product [Vitis vinifera]
Length = 616
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 184/546 (33%), Positives = 290/546 (53%), Gaps = 38/546 (6%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
NLVSW+A+I G +QN EAI M+ G P SS + ACA L + +GK+ H
Sbjct: 5 NLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMH 64
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
+ G S FV + L D+Y +CG M A K+F + K+EVS +I GY + G
Sbjct: 65 CLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFE 124
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
EA F +M DE ++ + +L S
Sbjct: 125 EALLAFKKM------------------------IDEEVTIDQHVLC------------ST 148
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
L AC + + + G+ +H+ + LG +SD FVG AL +MY + D+ +A F N
Sbjct: 149 LGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRN 208
Query: 298 LLG-KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHA 356
++ DG+ + +F E+ + P+ +T ++ AC++ A +E+G Q+HA
Sbjct: 209 VVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHA 268
Query: 357 YAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKE 416
++ +D D + + LVDMY KCG L+ A A+ I P ++ N++++ + HG GK+
Sbjct: 269 QVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKD 328
Query: 417 GIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMV 475
I F R++ G +P+ I+F+S L+ C HAG ++ G ++F M Y V P +HY+C++
Sbjct: 329 AIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVI 388
Query: 476 DLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTG 535
DLL RAG L EA EFI ++P P++ W + LG C HG+ E G++AA++L++LEP N+G
Sbjct: 389 DLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSG 448
Query: 536 NYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEE 595
V+L+N++A +W D+ R +M+D + K PG SW++ + H F A D SH R
Sbjct: 449 ALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFGAEDWSHPRKSA 508
Query: 596 IYTIID 601
IY +D
Sbjct: 509 IYEKLD 514
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 165/326 (50%), Gaps = 7/326 (2%)
Query: 192 QRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGK 251
QR ++SW +MISG NS + EA F + + G PT F F S + ACA + S+ GK
Sbjct: 3 QRNLVSWTAMISGLSQNSKFSEAIRTFCGMRIC-GEVPTQFAFSSAIRACASLGSIEMGK 61
Query: 252 EIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNV 311
++H LA+ G+ S+ FVG L +MY + + A F+E+ + + DG+
Sbjct: 62 QMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIG 121
Query: 312 YTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGT 371
A+ F +M+ ++T D + + L AC +L + G+ VH+ ++ G++SD+ +G
Sbjct: 122 EFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGN 181
Query: 372 ALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFR 430
AL DMY+K G ++ A + S ++VS ++ Y ++G++ F + G
Sbjct: 182 ALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIE 241
Query: 431 PDHISFLSALSACVHAGSIKTGSEFFD--LMAYYDVKPSLKHYTCMVDLLSRAGELGEAY 488
P+ +F S + AC + +++ G++ + +D P + + +VD+ + G L +A
Sbjct: 242 PNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVS--SILVDMYGKCGLLEQAI 299
Query: 489 EFIKKIPMAPDSVMWGALLGGCVSHG 514
+ +I P + W +L+ HG
Sbjct: 300 QAFDEIG-DPTEIAWNSLVSVFGQHG 324
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 113/422 (26%), Positives = 180/422 (42%), Gaps = 79/422 (18%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG++ DA KVF+ MP +D VSW
Sbjct: 85 MYSKCGAMFDACKVFEEMPCKDEVSW---------------------------------- 110
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+A+I G+++ G EEA+ +M E + + L S L AC L+ G+ H +
Sbjct: 111 --TAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSV 168
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFS-IKNEVSCNTIIVGYCENGNVAEA 179
+ GF S+ FV N L D+Y + GDM SA +F S +N VS +I GY E + +
Sbjct: 169 VKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKG 228
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
+F ++ R GIEP FTF S++
Sbjct: 229 LSVFVELR------------------------------------RQGIEPNEFTFSSLIK 252
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
ACA+ +L +G ++HA + + D FV LV+MY + L A AFDEI + +
Sbjct: 253 ACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIA 312
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
F + +A+++F M+ + P+ T +L+ CS +E G + Y++
Sbjct: 313 WNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLD-YFYSM 371
Query: 360 RCGY---DSDVHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNAMLTAYAMHGHGK 415
Y + H + ++D+ + G LK A+ R+ P+ + L A +HG +
Sbjct: 372 DKTYGVVPGEEHY-SCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKE 430
Query: 416 EG 417
G
Sbjct: 431 MG 432
>gi|297740904|emb|CBI31086.3| unnamed protein product [Vitis vinifera]
Length = 766
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 197/603 (32%), Positives = 310/603 (51%), Gaps = 51/603 (8%)
Query: 5 CGSLDDAK-------KVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETP 57
CG L+ K+ M E D +S++ + NG + +A +RM S D
Sbjct: 157 CGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDG--- 213
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
V W+ ++ G+ +NG + A G+ M+ PN+ T + VL CA ++ G + H
Sbjct: 214 --VLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLH 271
Query: 118 GYITRNGFMSNPFVVN--GLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGN 175
G + +G + V N L+D+Y +C D
Sbjct: 272 GLVVSSGLEMDSPVANTFALIDIYFKCRD------------------------------- 300
Query: 176 VAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFG 235
V AR++FDQ + I+ +MISGYV N + + A +FR L+++ + S T
Sbjct: 301 VEMARKIFDQRTPVD----IVVCTAMISGYVLNGMNNNALEIFR-WLLQERMRANSVTLA 355
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
SVL ACA + +L GKE+H + G +VG A+++MY + L A F I +
Sbjct: 356 SVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDK 415
Query: 296 ENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVH 355
+ + N A+ LF +M D ++ LSAC++L + GK++H
Sbjct: 416 DAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIH 475
Query: 356 AYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGK 415
A+ +R + SD+ +AL+DMY+KCG+L A + + + VS N+++ AY HG K
Sbjct: 476 AFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRLK 535
Query: 416 EGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCM 474
+ + F +L G +PDH++FL+ +SAC HAG + G +F M + ++HY CM
Sbjct: 536 DSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARMEHYACM 595
Query: 475 VDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNT 534
VDL RAG L EA+ I +P +PD+ +WG LLG C HGN+E ++A+ L +L+P N+
Sbjct: 596 VDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLGACRLHGNVELAEVASRNLFDLDPQNS 655
Query: 535 GNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSE 594
G YV+L+N+ A AG+W + + R MK+R + K PGCSWI+ + H F A+DRSH +S
Sbjct: 656 GYYVLLSNVHANAGQWESVLKIRSLMKERGVQKVPGCSWIDVNNTTHMFVAADRSHPQSS 715
Query: 595 EIY 597
+IY
Sbjct: 716 QIY 718
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 123/458 (26%), Positives = 216/458 (47%), Gaps = 39/458 (8%)
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W+ +I GFT G + A+ F+M G P+ T V+ AC L ++LG+ H I
Sbjct: 115 WNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHDKIQ 174
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
GF + FV + L+ Y G + A +F + K+ V N ++ GY +NG+ A
Sbjct: 175 FMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATG 234
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
+F +M R P S TF VL C
Sbjct: 235 VFMEMR------------------------------------RTETNPNSVTFACVLSVC 258
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGG--ALVEMYCRYQDLVAAQMAFDEIENIENLL 299
A + G ++H L ++ GL+ D+ V AL+++Y + +D+ A+ FD+ ++ ++
Sbjct: 259 ASEIMINFGSQLHGLVVSSGLEMDSPVANTFALIDIYFKCRDVEMARKIFDQRTPVDIVV 318
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
G+ N NA+++F +L + + T+ +L AC+ LA + GK++H + +
Sbjct: 319 CTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHIL 378
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
+ G+ ++G+A++DMYAKCG L A + IS D V N+M+T+ + +G +E I
Sbjct: 379 KNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAID 438
Query: 420 HFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLS 479
FR++ +G + D +S +ALSAC + ++ G E M + L + ++D+ S
Sbjct: 439 LFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYS 498
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
+ G L A + + V W +++ +HG L+
Sbjct: 499 KCGNLDLACRVFDTME-EKNEVSWNSIIAAYGNHGRLK 535
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/426 (24%), Positives = 183/426 (42%), Gaps = 39/426 (9%)
Query: 94 ARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFS 153
A L S+L C LS G++ H + NG N + L+ +Y CG L A IF
Sbjct: 46 APQLVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFY 105
Query: 154 KFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDE 213
+ + +C WN MI G+ +D
Sbjct: 106 QLRL------------WCSE-----------------------PWNWMIRGFTMMGQFDF 130
Query: 214 AFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALV 273
A +F ++ G P +TF V+ AC +NS+ G+ +H +G + D FVG +L+
Sbjct: 131 AL-LFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLI 189
Query: 274 EMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIY 333
+ Y + A+ FD + + + +L + +G+ N NA +F EM + P+
Sbjct: 190 KFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSV 249
Query: 334 TVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGT--ALVDMYAKCGSLKHARLAYK 391
T +LS C+S + G Q+H + G + D + AL+D+Y KC ++ AR +
Sbjct: 250 TFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTFALIDIYFKCRDVEMARKIFD 309
Query: 392 RISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKT 451
+ + D+V AM++ Y ++G + FR +L R + ++ S L AC ++
Sbjct: 310 QRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTL 369
Query: 452 GSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCV 511
G E + S + ++D+ ++ G L A++ I D+V W +++ C
Sbjct: 370 GKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGIS-DKDAVCWNSMITSCS 428
Query: 512 SHGNLE 517
+G E
Sbjct: 429 QNGKPE 434
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 107/227 (47%), Gaps = 36/227 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG LD A + F + ++D V WNS++T+C+ N
Sbjct: 395 MYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQN------------------------ 430
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
G EEAI + +M G + + ++S+ L ACA L L GKE H ++
Sbjct: 431 ------------GKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFM 478
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R F S+ F + L+D+Y +CG++ A ++F KNEVS N+II Y +G + ++
Sbjct: 479 MRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSL 538
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGI 227
LF M G+Q +++ ++IS DE FR + GI
Sbjct: 539 NLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGI 585
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 91/209 (43%), Gaps = 6/209 (2%)
Query: 328 LTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHAR 387
L P + + IL C+ + + +G+Q HA + G + +GT L+ MY CG+ A+
Sbjct: 45 LAPQLVS---ILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAK 101
Query: 388 LAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAG 447
+ ++ N M+ + M G + + ++L G PD +F + AC
Sbjct: 102 NIFYQLRLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLN 161
Query: 448 SIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALL 507
S+ G D + + + + + ++ S G + +A ++P + D V+W +L
Sbjct: 162 SVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMP-SKDGVLWNVML 220
Query: 508 GGCVSHGNLE--FGQIAADRLIELEPNNT 534
G V +G+ + G R E PN+
Sbjct: 221 NGYVKNGDWDNATGVFMEMRRTETNPNSV 249
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 79/190 (41%), Gaps = 42/190 (22%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG+LD A +VF M E++ VSWNS++ A
Sbjct: 496 MYSKCGNLDLACRVFDTMEEKNEVSWNSIIAA---------------------------- 527
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+ +G ++++ + M +G++P+ T +++ AC ++ G + +
Sbjct: 528 --------YGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCM 579
Query: 121 TRN-GFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCE-NGNV-- 176
T G M+ +VD++ R G + A + + + ++G C +GNV
Sbjct: 580 TEELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLGACRLHGNVEL 639
Query: 177 --AEARELFD 184
+R LFD
Sbjct: 640 AEVASRNLFD 649
>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Vitis vinifera]
Length = 719
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 194/605 (32%), Positives = 327/605 (54%), Gaps = 46/605 (7%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KCG L A+K F+ + + + S+N+++ A A L A + +++ P+LV
Sbjct: 52 LYSKCGRLAWARKAFQDISDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPE-----PDLV 106
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
S++ +I + G A+G+ M+ GL+ + TLS+V+ AC + L + H
Sbjct: 107 SYNTLISAYADCGETAPALGLFSGMREMGLDMDGFTLSAVITACC--DDVGLIGQLHSVA 164
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+GF S V N L+ Y + NG++ +A+
Sbjct: 165 VSSGFDSYVSVNNALLTYYGK-------------------------------NGDLDDAK 193
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+F M G R +SWNSMI Y + +A +F++++ R G+ FT SVL A
Sbjct: 194 RVFYGM---GGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRR-GLNVDMFTLASVLTA 249
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQD-LVAAQMAFDEIENIENLL 299
+ L G + H I G ++ VG L+++Y + + + F+EI + +L
Sbjct: 250 FTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVL 309
Query: 300 GKMKEDGFEPNV-YTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYA 358
G+ N + +A++ F +M + P+ + ++SACS+L++ +GKQ+H+ A
Sbjct: 310 WNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLA 369
Query: 359 IRCGYDSD-VHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEG 417
++ S+ + + AL+ MY+KCG+L+ AR + R++ + VS N+M+ YA HG E
Sbjct: 370 LKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMES 429
Query: 418 IAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVD 476
+ F+ +L P I+F+S LSAC H G ++ G +F++M ++++P +HY+CM+D
Sbjct: 430 LHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMID 489
Query: 477 LLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGN 536
LL RAG+L EA I ++P P S+ W +LLG C +HGN+E AA+++++LEP+N
Sbjct: 490 LLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAP 549
Query: 537 YVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEI 596
YV+L+N++A AGRW ++A R+ M+DR + K PGCSWIE + IH F A D SH +EI
Sbjct: 550 YVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMIKEI 609
Query: 597 YTIID 601
Y ++
Sbjct: 610 YEFLE 614
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 117/429 (27%), Positives = 204/429 (47%), Gaps = 32/429 (7%)
Query: 100 VLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKN 159
+L C + LS GK H ++ + + N + +Y +CG + A K F S N
Sbjct: 14 LLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPN 73
Query: 160 EVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFR 219
S N II Y + A +LFDQ+ + ++S+N++IS Y D A +F
Sbjct: 74 VFSFNAIIAAYAKESRPLIAHQLFDQIP----EPDLVSYNTLISAYADCGETAPALGLFS 129
Query: 220 DLLMRD-GIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCR 278
MR+ G++ FT +V+ AC D L ++H++A++ G S V AL+ Y +
Sbjct: 130 G--MREMGLDMDGFTLSAVITACCDDVGLI--GQLHSVAVSSGFDSYVSVNNALLTYYGK 185
Query: 279 YQDLVAAQMAFDEIENIENLL---------GKMKEDGFEPNVYTWNAMQLFSEMLSLDLT 329
DL A+ F + I + + G+ +E A+ LF EM+ L
Sbjct: 186 NGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGS--------KALGLFQEMVRRGLN 237
Query: 330 PDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKC-GSLKHARL 388
D++T+ +L+A + L + G Q H I+ G+ + H+G+ L+D+Y+KC G + R
Sbjct: 238 VDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRK 297
Query: 389 AYKRISTPDLVSQNAMLTAYAMHGHGKE-GIAHFRRILASGFRPDHISFLSALSACVHAG 447
++ I+ PDLV N M++ Y+ + E + FR++ G+RP+ SF+ +SAC +
Sbjct: 298 VFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLS 357
Query: 448 SIKTGSEFFDLMAYYDVKPS--LKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGA 505
S G + L D+ PS + ++ + S+ G L +A ++ ++V +
Sbjct: 358 SPSQGKQIHSLALKSDI-PSNRISVDNALIAMYSKCGNLQDARRLFDRMA-EHNTVSLNS 415
Query: 506 LLGGCVSHG 514
++ G HG
Sbjct: 416 MIAGYAQHG 424
>gi|108710611|gb|ABF98406.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 787
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 205/636 (32%), Positives = 329/636 (51%), Gaps = 54/636 (8%)
Query: 4 KCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETP--NLVS 61
K G + A+++F MPER VS+ ++V A G V +A+E L + P ++
Sbjct: 160 KAGDIVSARRLFDGMPERSVVSYTTMVDALMKRGSVRDAVE-------LYRQCPLCSVPF 212
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
++A+I GF N ++A+G+ M + G+ PN TL SV+ AC + L G
Sbjct: 213 FTAMIAGFVLNELPKDALGVFHEMLSCGVSPNEITLVSVIKACIGAGEFDLAMSIVGLAM 272
Query: 122 RNGFM-SNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
++ + N V N L+ +Y R GD +A ++F + +++ VS ++ Y E G++ AR
Sbjct: 273 KSNLLDKNLGVRNSLITLYLRKGDADAARRMFDEMEVRDVVSWTALLDVYAELGDLEGAR 332
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+ D+M +R +SW ++++ + EA S++ +L DG P F SVL A
Sbjct: 333 RVLDEMP----ERNEVSWGTLVARHEQKGNAKEAVSLYSQMLA-DGCRPNISCFSSVLGA 387
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI--ENI--- 295
CA + LR G++IH + + ++ FV AL++MYC+ + L AQM F + +NI
Sbjct: 388 CASLQDLRSGRKIHNQTLKMACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLPQKNIVCW 447
Query: 296 ----------------ENLLGKMKEDGFEPNVYTWN--------------AMQLFSEMLS 325
E L KM NV +WN A++ F ML+
Sbjct: 448 NSLISGYSNNSKMVEAEELFKKMPAR----NVASWNSIISGYAQNRQFIDALKSFHAMLA 503
Query: 326 LDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKH 385
+P T +L AC+SL ++E GK VHA I+ G + +GTAL DMYAK G L
Sbjct: 504 SGQSPGEITFSSVLLACASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAKSGDLDS 563
Query: 386 ARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVH 445
++ + + + V+ AM+ A +G +E I F ++++G P+ +FL+ L AC H
Sbjct: 564 SKRVFYEMPKRNDVAWTAMIQGLAENGFAEESILLFEDMISAGITPNEQTFLAILFACSH 623
Query: 446 AGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGA 505
+G ++ +F++M + P KHYTCMVD+L+RAG L EA + + KI ++ W A
Sbjct: 624 SGLVEHAMHYFEMMQACGISPKAKHYTCMVDVLARAGHLAEAEDLLLKIESKSEANSWAA 683
Query: 506 LLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRM 565
LL C + N E G+ AA RL EL+ +NT YV+L+N++A G+W D A R MK +
Sbjct: 684 LLSACNIYRNKEMGERAAKRLQELDKDNTAGYVLLSNMYASCGKWKDAAEMRILMKGINL 743
Query: 566 HKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
K GCSW++ R + F + + H ++Y ++D
Sbjct: 744 KKDGGCSWVQIRGQYQAFFSWETKHPLLPDVYEMLD 779
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 131/425 (30%), Positives = 197/425 (46%), Gaps = 42/425 (9%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y + G L+ A++V MPER+ VSW ++V G EA+ +M + D PN+
Sbjct: 321 VYAELGDLEGARRVLDEMPERNEVSWGTLVARHEQKGNAKEAVSLYSQMLA-DGCRPNIS 379
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+S+V+G ACA LQ L G++ H
Sbjct: 380 CFSSVLG-----------------------------------ACASLQDLRSGRKIHNQT 404
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ +N FV + L+D+Y +C + A IF KN V N++I GY N + EA
Sbjct: 405 LKMACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLPQKNIVCWNSLISGYSNNSKMVEAE 464
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
ELF +M R + SWNS+ISGY N + +A F +L G P TF SVL+A
Sbjct: 465 ELFKKMP----ARNVASWNSIISGYAQNRQFIDALKSFHAMLA-SGQSPGEITFSSVLLA 519
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA + SL GK +HA I LG++ FVG AL +MY + DL +++ F E+ ++
Sbjct: 520 CASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAKSGDLDSSKRVFYEMPKRNDVAW 579
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G N + ++ LF +M+S +TP+ T IL ACS +E
Sbjct: 580 TAMIQGLAENGFAEESILLFEDMISAGITPNEQTFLAILFACSHSGLVEHAMHYFEMMQA 639
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHAR-LAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
CG T +VD+ A+ G L A L K S + S A+L+A ++ + + G
Sbjct: 640 CGISPKAKHYTCMVDVLARAGHLAEAEDLLLKIESKSEANSWAALLSACNIYRNKEMGER 699
Query: 420 HFRRI 424
+R+
Sbjct: 700 AAKRL 704
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 119/484 (24%), Positives = 215/484 (44%), Gaps = 74/484 (15%)
Query: 127 SNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQM 186
++PF + +V + + GD++SA ++F ++ VS T++ + G+V +A EL+ Q
Sbjct: 146 ASPFAYDFMVREHVKAGDIVSARRLFDGMPERSVVSYTTMVDALMKRGSVRDAVELYRQC 205
Query: 187 EHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNS 246
V + +MI+G+V N L +A +F ++L G+ P T SV+ AC
Sbjct: 206 PLCSVP----FFTAMIAGFVLNELPKDALGVFHEML-SCGVSPNEITLVSVIKACIGAGE 260
Query: 247 LRKGKEIHALAIALGLQSDTF-VGGALVEMYCRYQDLVAAQMAFDEIE-----------N 294
I LA+ L V +L+ +Y R D AA+ FDE+E +
Sbjct: 261 FDLAMSIVGLAMKSNLLDKNLGVRNSLITLYLRKGDADAARRMFDEMEVRDVVSWTALLD 320
Query: 295 IENLLGKMK------EDGFEPNVYTW--------------NAMQLFSEMLSLDLTPDIYT 334
+ LG ++ ++ E N +W A+ L+S+ML+ P+I
Sbjct: 321 VYAELGDLEGARRVLDEMPERNEVSWGTLVARHEQKGNAKEAVSLYSQMLADGCRPNISC 380
Query: 335 VGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLA----- 389
+L AC+SL + G+++H ++ ++V + +AL+DMY KC L A++
Sbjct: 381 FSSVLGACASLQDLRSGRKIHNQTLKMACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLP 440
Query: 390 --------------------------YKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRR 423
+K++ ++ S N++++ YA + + + F
Sbjct: 441 QKNIVCWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSIISGYAQNRQFIDALKSFHA 500
Query: 424 ILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGE 483
+LASG P I+F S L AC S++ G + +K S+ T + D+ +++G+
Sbjct: 501 MLASGQSPGEITFSSVLLACASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAKSGD 560
Query: 484 LGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIE--LEPNNTGNYVMLA 541
L + ++P D V W A++ G +G E + + +I + PN LA
Sbjct: 561 LDSSKRVFYEMPKRND-VAWTAMIQGLAENGFAEESILLFEDMISAGITPNEQ---TFLA 616
Query: 542 NLFA 545
LFA
Sbjct: 617 ILFA 620
>gi|224085073|ref|XP_002307479.1| predicted protein [Populus trichocarpa]
gi|222856928|gb|EEE94475.1| predicted protein [Populus trichocarpa]
Length = 1026
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 195/578 (33%), Positives = 317/578 (54%), Gaps = 46/578 (7%)
Query: 27 NSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQ 86
N++V A +G + +A + E + + DN VSW+ +I G+ Q + EA + RM
Sbjct: 467 NALVDMYAKSGALEDARQQFELIRNRDN-----VSWNVIIVGYVQEEDEVEAFHLFRRMN 521
Query: 87 AEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDML 146
G+ P+ +L+S+L ACA ++ L GK+ H + G + + + L+D+Y +CG +
Sbjct: 522 LLGILPDEVSLASILSACASVRGLEQGKQVHCLSVKTGQETKLYSGSSLIDMYAKCGAID 581
Query: 147 SALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYV 206
SA KI + +R ++S N++I+GY
Sbjct: 582 SAHKILACMP-----------------------------------ERSVVSMNALIAGYA 606
Query: 207 DNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQ-SD 265
+L ++A ++FRD+L+ +GI T TF S+L AC + L G++IH+L + +GLQ D
Sbjct: 607 QINL-EQAVNLFRDMLV-EGINSTEITFASLLDACHEQQKLNLGRQIHSLILKMGLQLDD 664
Query: 266 TFVGGALVEMYCRYQDLVAAQMAFDEIENIEN-LLGKMKEDGFEPNVYTWNAMQLFSEML 324
F+G +L+ MY A + F E N ++ ++ G N + A+QL+ EM
Sbjct: 665 EFLGVSLLGMYMNSLRTTDASVLFSEFSNPKSAVVWTAMISGLSQNDCSVVALQLYKEMR 724
Query: 325 SLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLK 384
S ++ PD T L AC+ +++++ G + H+ G+DSD +ALVDMYAKCG +K
Sbjct: 725 SCNVLPDQATFVSALRACAVVSSIKDGTETHSLIFHTGFDSDELTSSALVDMYAKCGDVK 784
Query: 385 HARLAYKRIS-TPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSAC 443
+ +K +S D++S N+M+ +A +G+ ++ + F + S PD ++FL L+AC
Sbjct: 785 SSMQVFKEMSRKKDVISWNSMIVGFAKNGYAEDALRVFDEMKQSHVTPDDVTFLGVLTAC 844
Query: 444 VHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVM 502
H+G + G FD+M Y ++P H CMVDLL R G L EA EFI K+ PD+ +
Sbjct: 845 SHSGRVSEGRLIFDMMVNLYGMQPRADHCACMVDLLGRWGSLKEAEEFINKLNFEPDAKV 904
Query: 503 WGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKD 562
W +LG C HG+ GQ AA++LIELEP N+ YV+L+N++A +G W ++ R++M++
Sbjct: 905 WATMLGACRIHGDDIRGQQAAEKLIELEPQNSSPYVLLSNIYAASGNWDEVNTLRREMRE 964
Query: 563 RRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTII 600
+ + K PGCSWI E + F A D+SH + EI I+
Sbjct: 965 KGVKKLPGCSWIVVGQETNMFVAGDKSHHSASEIDAIL 1002
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 150/526 (28%), Positives = 248/526 (47%), Gaps = 68/526 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KC +D A++ FK + ++D ++WNS+++ + G P+LV
Sbjct: 103 LYAKCADVDYAERAFKQLEDKDILAWNSILSMHSKQGF------------------PHLV 144
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+ G+L+ G+ PN T + VL +CARL+ + G++ H +
Sbjct: 145 V---------------KYFGLLWN---SGVWPNEFTFAIVLSSCARLEMVKCGRQVHCNV 186
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ GF S + L+ +Y +C + A IF ++VS ++I GY + G EA
Sbjct: 187 VKMGFESISYCEGALIGMYAKCNFLTDARSIFDGAVELDKVSWTSMIGGYIKVGLPEEAV 246
Query: 181 ELFDQMEHLGVQ-------------------------------RGIISWNSMISGYVDNS 209
++F +ME +G + R +++WN MISG+
Sbjct: 247 KVFQEMEKVGQEPDQVAFVTVINAYVDLGRLDNASDLFSRMPNRNVVAWNLMISGHAKGG 306
Query: 210 LYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVG 269
EA F++ + + GI+ T T GSVL A A + +L G +HA A+ GL S+ +VG
Sbjct: 307 YGVEAIEFFQN-MRKAGIKSTRSTLGSVLSAIASLAALDFGLLVHAEALKQGLHSNVYVG 365
Query: 270 GALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLT 329
+LV MY + + AA+ FD + +L G+ N Y M+LF M S
Sbjct: 366 SSLVSMYAKCGKMEAAKKVFDTLNEQNVVLWNAMLGGYVQNGYANEVMELFFNMKSCGFY 425
Query: 330 PDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLA 389
PD +T ILSAC+ L ++ G Q+H+ I+ + S++ +G ALVDMYAK G+L+ AR
Sbjct: 426 PDDFTYSSILSACACLKYLDLGHQLHSVIIKNKFASNLFVGNALVDMYAKSGALEDARQQ 485
Query: 390 YKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSI 449
++ I D VS N ++ Y E FRR+ G PD +S S LSAC +
Sbjct: 486 FELIRNRDNVSWNVIIVGYVQEEDEVEAFHLFRRMNLLGILPDEVSLASILSACASVRGL 545
Query: 450 KTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIP 495
+ G + L + L + ++D+ ++ G + A++ + +P
Sbjct: 546 EQGKQVHCLSVKTGQETKLYSGSSLIDMYAKCGAIDSAHKILACMP 591
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 120/476 (25%), Positives = 202/476 (42%), Gaps = 110/476 (23%)
Query: 106 RLQKLSL-GKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCN 164
RL + S K H + GF S + N +VD+Y +C D
Sbjct: 70 RLSQFSTTNKIIHAQSLKLGFWSKGVLGNVIVDLYAKCAD-------------------- 109
Query: 165 TIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMR 224
V Y E F Q+E + I++WNS++S + F LL
Sbjct: 110 ---VDYAERA--------FKQLE----DKDILAWNSILSMHSKQGFPHLVVKYF-GLLWN 153
Query: 225 DGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVA 284
G+ P FTF VL +CA + ++ G+++H + +G +S ++ GAL+ MY + L
Sbjct: 154 SGVWPNEFTFAIVLSSCARLEMVKCGRQVHCNVVKMGFESISYCEGALIGMYAKCNFLTD 213
Query: 285 AQMAFD---EIENIE------------------NLLGKMKEDGFEP-------------- 309
A+ FD E++ + + +M++ G EP
Sbjct: 214 ARSIFDGAVELDKVSWTSMIGGYIKVGLPEEAVKVFQEMEKVGQEPDQVAFVTVINAYVD 273
Query: 310 -----------------NVYTWN--------------AMQLFSEMLSLDLTPDIYTVGII 338
NV WN A++ F M + T+G +
Sbjct: 274 LGRLDNASDLFSRMPNRNVVAWNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTLGSV 333
Query: 339 LSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDL 398
LSA +SLA ++ G VHA A++ G S+V++G++LV MYAKCG ++ A+ + ++ ++
Sbjct: 334 LSAIASLAALDFGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTLNEQNV 393
Query: 399 VSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDL 458
V NAML Y +G+ E + F + + GF PD ++ S LSAC + G + +
Sbjct: 394 VLWNAMLGGYVQNGYANEVMELFFNMKSCGFYPDDFTYSSILSACACLKYLDLGHQLHSV 453
Query: 459 MAYYDVKPSLKHYTCMVDLLSRAGELGEA---YEFIKKIPMAPDSVMWGALLGGCV 511
+ +L +VD+ +++G L +A +E I+ D+V W ++ G V
Sbjct: 454 IIKNKFASNLFVGNALVDMYAKSGALEDARQQFELIRN----RDNVSWNVIIVGYV 505
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 111/422 (26%), Positives = 174/422 (41%), Gaps = 78/422 (18%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG++D A K+ MPER VS N
Sbjct: 573 MYAKCGAIDSAHKILACMPERSVVSMN--------------------------------- 599
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
A+I G+ Q E+A+ + M EG+ T +S+L AC QKL+LG++ H I
Sbjct: 600 ---ALIAGYAQINL-EQAVNLFRDMLVEGINSTEITFASLLDACHEQQKLNLGRQIHSLI 655
Query: 121 TRNGF-MSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ G + + F+ L+ +Y A +FS+FS
Sbjct: 656 LKMGLQLDDEFLGVSLLGMYMNSLRTTDASVLFSEFSNP--------------------- 694
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRD-GIEPTSFTFGSVL 238
+ + W +MISG N A ++++ MR + P TF S L
Sbjct: 695 -------------KSAVVWTAMISGLSQNDCSVVALQLYKE--MRSCNVLPDQATFVSAL 739
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
ACA ++S++ G E H+L G SD ALV+MY + D+ ++ F E+ +++
Sbjct: 740 RACAVVSSIKDGTETHSLIFHTGFDSDELTSSALVDMYAKCGDVKSSMQVFKEMSRKKDV 799
Query: 299 LG-KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAY 357
+ GF N Y +A+++F EM +TPD T +L+ACS + G+ +
Sbjct: 800 ISWNSMIVGFAKNGYAEDALRVFDEMKQSHVTPDDVTFLGVLTACSHSGRVSEGRLIFDM 859
Query: 358 AIRC-GYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNAMLTAYAMHGHGK 415
+ G +VD+ + GSLK A +++ PD ML A +HG
Sbjct: 860 MVNLYGMQPRADHCACMVDLLGRWGSLKEAEEFINKLNFEPDAKVWATMLGACRIHGDDI 919
Query: 416 EG 417
G
Sbjct: 920 RG 921
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 138/277 (49%), Gaps = 17/277 (6%)
Query: 251 KEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE-----NLLGKMKED 305
K IHA ++ LG S +G +V++Y + D+ A+ AF ++E+ + ++L +
Sbjct: 79 KIIHAQSLKLGFWSKGVLGNVIVDLYAKCADVDYAERAFKQLEDKDILAWNSILSMHSKQ 138
Query: 306 GFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDS 365
GF P++ ++ F + + + P+ +T I+LS+C+ L ++ G+QVH ++ G++S
Sbjct: 139 GF-PHL----VVKYFGLLWNSGVWPNEFTFAIVLSSCARLEMVKCGRQVHCNVVKMGFES 193
Query: 366 DVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRIL 425
+ AL+ MYAKC L AR + D VS +M+ Y G +E + F+ +
Sbjct: 194 ISYCEGALIGMYAKCNFLTDARSIFDGAVELDKVSWTSMIGGYIKVGLPEEAVKVFQEME 253
Query: 426 ASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELG 485
G PD ++F++ ++A V G + S+ F M +V + M+ ++ G
Sbjct: 254 KVGQEPDQVAFVTVINAYVDLGRLDNASDLFSRMPNRNVVA----WNLMISGHAKGGYGV 309
Query: 486 EAYEF---IKKIPMAPDSVMWGALLGGCVSHGNLEFG 519
EA EF ++K + G++L S L+FG
Sbjct: 310 EAIEFFQNMRKAGIKSTRSTLGSVLSAIASLAALDFG 346
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 104/224 (46%), Gaps = 20/224 (8%)
Query: 352 KQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMH 411
K +HA +++ G+ S +G +VD+YAKC + +A A+K++ D+++ N++L+ ++
Sbjct: 79 KIIHAQSLKLGFWSKGVLGNVIVDLYAKCADVDYAERAFKQLEDKDILAWNSILSMHSKQ 138
Query: 412 GHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEF--------FDLMAYYD 463
G + +F + SG P+ +F LS+C +K G + F+ ++Y +
Sbjct: 139 GFPHLVVKYFGLLWNSGVWPNEFTFAIVLSSCARLEMVKCGRQVHCNVVKMGFESISYCE 198
Query: 464 VKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAA 523
++ + ++ L +A + D V W +++GG + G E
Sbjct: 199 --------GALIGMYAKCNFLTDARSIFDG-AVELDKVSWTSMIGGYIKVGLPEEAVKVF 249
Query: 524 DRLIEL--EPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRM 565
+ ++ EP+ +V + N + GR + + +M +R +
Sbjct: 250 QEMEKVGQEPDQVA-FVTVINAYVDLGRLDNASDLFSRMPNRNV 292
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 92/199 (46%), Gaps = 11/199 (5%)
Query: 1 MYGKCGSLDDAKKVFKMMP-ERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNL 59
MY KCG + + +VFK M ++D +SWNS++ A NG +AL + M + TP+
Sbjct: 776 MYAKCGDVKSSMQVFKEMSRKKDVISWNSMIVGFAKNGYAEDALRVFDEMKQ-SHVTPDD 834
Query: 60 VSWSAVIGGFTQNGYDEEAIGMLFRMQAE--GLEPNARTLSSVLPACARLQKLSLGKEFH 117
V++ V+ + +G E ++F M G++P A + ++ R L +EF
Sbjct: 835 VTFLGVLTACSHSGRVSEG-RLIFDMMVNLYGMQPRADHCACMVDLLGRWGSLKEAEEF- 892
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKF-SIKNEVSCNTIIVG--YCENG 174
I + F + V ++ R GD + + K ++ + S +++ Y +G
Sbjct: 893 --INKLNFEPDAKVWATMLGACRIHGDDIRGQQAAEKLIELEPQNSSPYVLLSNIYAASG 950
Query: 175 NVAEARELFDQMEHLGVQR 193
N E L +M GV++
Sbjct: 951 NWDEVNTLRREMREKGVKK 969
>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
Length = 719
Score = 338 bits (867), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 194/605 (32%), Positives = 327/605 (54%), Gaps = 46/605 (7%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KCG L A+K F+ + + + S+N+++ A A L A + +++ P+LV
Sbjct: 52 LYSKCGRLAWARKAFQDISDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPE-----PDLV 106
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
S++ +I + G A+G+ M+ GL+ + TLS+V+ AC + L + H
Sbjct: 107 SYNTLISAYADCGETAPALGLFSGMREMGLDMDXFTLSAVITACC--DDVGLIGQLHSVA 164
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+GF S V N L+ Y + NG++ +A+
Sbjct: 165 VSSGFDSYVSVNNALLTYYGK-------------------------------NGDLDDAK 193
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+F M G R +SWNSMI Y + +A +F++++ R G+ FT SVL A
Sbjct: 194 RVFYGM---GGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRR-GLNVDMFTLASVLTA 249
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQD-LVAAQMAFDEIENIENLL 299
+ L G + H I G ++ VG L+++Y + + + F+EI + +L
Sbjct: 250 FTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVL 309
Query: 300 GKMKEDGFEPNV-YTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYA 358
G+ N + +A++ F +M + P+ + ++SACS+L++ +GKQ+H+ A
Sbjct: 310 WNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLA 369
Query: 359 IRCGYDSD-VHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEG 417
++ S+ + + AL+ MY+KCG+L+ AR + R++ + VS N+M+ YA HG E
Sbjct: 370 LKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMES 429
Query: 418 IAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVD 476
+ F+ +L P I+F+S LSAC H G ++ G +F++M ++++P +HY+CM+D
Sbjct: 430 LHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMID 489
Query: 477 LLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGN 536
LL RAG+L EA I ++P P S+ W +LLG C +HGN+E AA+++++LEP+N
Sbjct: 490 LLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAP 549
Query: 537 YVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEI 596
YV+L+N++A AGRW ++A R+ M+DR + K PGCSWIE + IH F A D SH +EI
Sbjct: 550 YVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMIKEI 609
Query: 597 YTIID 601
Y ++
Sbjct: 610 YEFLE 614
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 117/429 (27%), Positives = 204/429 (47%), Gaps = 32/429 (7%)
Query: 100 VLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKN 159
+L C + LS GK H ++ + + N + +Y +CG + A K F S N
Sbjct: 14 LLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPN 73
Query: 160 EVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFR 219
S N II Y + A +LFDQ+ + ++S+N++IS Y D A +F
Sbjct: 74 VFSFNAIIAAYAKESRPLIAHQLFDQIP----EPDLVSYNTLISAYADCGETAPALGLFS 129
Query: 220 DLLMRD-GIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCR 278
MR+ G++ FT +V+ AC D L ++H++A++ G S V AL+ Y +
Sbjct: 130 G--MREMGLDMDXFTLSAVITACCDDVGLI--GQLHSVAVSSGFDSYVSVNNALLTYYGK 185
Query: 279 YQDLVAAQMAFDEIENIENLL---------GKMKEDGFEPNVYTWNAMQLFSEMLSLDLT 329
DL A+ F + I + + G+ +E A+ LF EM+ L
Sbjct: 186 NGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGS--------KALGLFQEMVRRGLN 237
Query: 330 PDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKC-GSLKHARL 388
D++T+ +L+A + L + G Q H I+ G+ + H+G+ L+D+Y+KC G + R
Sbjct: 238 VDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRK 297
Query: 389 AYKRISTPDLVSQNAMLTAYAMHGHGKE-GIAHFRRILASGFRPDHISFLSALSACVHAG 447
++ I+ PDLV N M++ Y+ + E + FR++ G+RP+ SF+ +SAC +
Sbjct: 298 VFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLS 357
Query: 448 SIKTGSEFFDLMAYYDVKPS--LKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGA 505
S G + L D+ PS + ++ + S+ G L +A ++ ++V +
Sbjct: 358 SPSQGKQIHSLALKSDI-PSNRISVDNALIAMYSKCGNLQDARRLFDRMA-EHNTVSLNS 415
Query: 506 LLGGCVSHG 514
++ G HG
Sbjct: 416 MIAGYAQHG 424
>gi|225430696|ref|XP_002266026.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840 [Vitis vinifera]
Length = 713
Score = 338 bits (867), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 189/603 (31%), Positives = 304/603 (50%), Gaps = 75/603 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G + + ++VF MP R N+V
Sbjct: 160 MYTKNGKIFEGRRVFHEMPMR------------------------------------NVV 183
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A+I G + GY++EA+ M +E ++ T + L ACA L+ G+E H
Sbjct: 184 SWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQA 243
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ GF + FV N L +Y +CG + L +F K S+
Sbjct: 244 MKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSM----------------------- 280
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDG-IEPTSFTFGSVLI 239
R ++SW ++I+ V + A F + MR+ + P +TF +V+
Sbjct: 281 ------------RDVVSWTTIITTLVQMGQEECAVQAF--IRMRESDVSPNEYTFAAVIS 326
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
CA++ + G+++HAL + LGL + V +++ MY + L ++ + F E+ + +
Sbjct: 327 GCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVS 386
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
G+ + A +L S M P + + +LSAC ++A +E GKQ+HAY +
Sbjct: 387 WSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVL 446
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
G + + +AL++MY KCGS++ A + D+VS AM+ YA HG+ +E I
Sbjct: 447 SIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSREVID 506
Query: 420 HFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLL 478
F +I G RPD ++F+ LSAC HAG + G +F+ M+ Y + PS +HY CM+DLL
Sbjct: 507 LFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFRYFNAMSKKYQISPSKEHYGCMIDLL 566
Query: 479 SRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYV 538
RAG L +A I+ +P D V+W LL C HG++E G+ A+R+++LEPN G ++
Sbjct: 567 CRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHGDVERGRRTAERILQLEPNCAGTHI 626
Query: 539 MLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYT 598
LAN++A G+W + A R+ MK + + K PG SWI+ +D + F A DRSH + E+IY
Sbjct: 627 TLANIYASKGKWREAADIRKLMKSKGVIKEPGWSWIKVKDLVFAFVAGDRSHPQGEDIYN 686
Query: 599 IID 601
++D
Sbjct: 687 MLD 689
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 163/345 (47%), Gaps = 5/345 (1%)
Query: 172 ENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTS 231
+ G++ AR +FD+M Q+ ISW ++ISGYV+ + EA +F+++ + G+
Sbjct: 61 KTGHLGNARRMFDKMS----QKDEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDP 116
Query: 232 FTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDE 291
F AC + + G+ +H A+ GL + FVG AL++MY + + + F E
Sbjct: 117 FILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHE 176
Query: 292 IENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG 351
+ + G Y A+ FSEM + D YT I L AC+ + G
Sbjct: 177 MPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYG 236
Query: 352 KQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMH 411
+++HA A++ G+D + L MY KCG L++ ++++S D+VS ++T
Sbjct: 237 REIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQM 296
Query: 412 GHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHY 471
G + + F R+ S P+ +F + +S C + I+ G + L+ + + SL
Sbjct: 297 GQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVE 356
Query: 472 TCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNL 516
++ + ++ G+L + ++ D V W ++ G G++
Sbjct: 357 NSIMTMYAKCGQLTSSSVIFHEMT-RRDIVSWSTIIAGYSQGGHV 400
>gi|356502788|ref|XP_003520198.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 193/598 (32%), Positives = 313/598 (52%), Gaps = 74/598 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG ++DA +VF+ M RD V
Sbjct: 292 MYAKCGRMEDAGRVFESMLCRD------------------------------------YV 315
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ ++ G QN +A+ MQ G +P+ ++ +++ A R L GKE H Y
Sbjct: 316 SWNTLLSGLVQNELYSDALNYFRDMQNSGQKPDQVSVLNLIAASGRSGNLLKGKEVHAYA 375
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
RNG SN + N LVD+Y +C C +G+
Sbjct: 376 IRNGLDSNMQIGNTLVDMYAKC--------------------CCVKYMGHA--------- 406
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
F+ M ++ +ISW ++I+GY N + EA ++FR + ++ G++ GSVL A
Sbjct: 407 --FECMH----EKDLISWTTIIAGYAQNEFHLEAINLFRKVQVK-GMDVDPMMIGSVLRA 459
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C+ + S +EIH L +D + A+V +Y + A+ AF+ I + + +
Sbjct: 460 CSGLKSRNFIREIHGYVFKRDL-ADIMLQNAIVNVYGEVGHIDYARRAFESIRSKDIVSW 518
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
N A++LF + ++ PD + LSA ++L+++++GK++H + IR
Sbjct: 519 TSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIR 578
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
G+ + I ++LVDMYA CG+++++R + + DL+ +M+ A MHG G + IA
Sbjct: 579 KGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHGCGNKAIAL 638
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLS 479
F+++ PDHI+FL+ L AC H+G + G FF++M Y Y ++P +HY CMVDLLS
Sbjct: 639 FKKMTDQNVIPDHITFLALLYACSHSGLMVEGKRFFEIMKYGYQLEPWPEHYACMVDLLS 698
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
R+ L EAY F++ +P+ P S +W ALLG C H N E G++AA L++ + N+G Y +
Sbjct: 699 RSNSLEEAYHFVRNMPIKPSSEIWCALLGACHIHSNKELGELAAKELLQSDTENSGKYAL 758
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
++N+FA GRW+D+ R +MK + K+PGCSWIE ++IH F A D+SH ++++IY
Sbjct: 759 ISNIFAADGRWNDVEEVRLRMKGNGLKKNPGCSWIEVDNKIHTFMARDKSHPQTDDIY 816
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 147/520 (28%), Positives = 224/520 (43%), Gaps = 84/520 (16%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKCGSL DA KVF M ER SWN
Sbjct: 88 MYGKCGSLRDAVKVFDEMSERTIFSWN--------------------------------- 114
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
A++G F +G EAI + M+ G+ +A T SVL AC L + LG E HG
Sbjct: 115 ---ALMGAFVSSGKYLEAIELYKDMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGVA 171
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G+ FV N L+ +Y +C G++ AR
Sbjct: 172 VKCGYGEFVFVCNALIAMYGKC-------------------------------GDLGGAR 200
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LFD + + + +SWNS+IS +V EA S+FR + G+ ++TF + L
Sbjct: 201 VLFDGI--MMEKEDTVSWNSIISAHVAEGNCLEALSLFRRM-QEVGVASNTYTFVAALQG 257
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
D + ++ G IH + +D +V AL+ MY + + A F+ + + +
Sbjct: 258 VEDPSFVKLGMGIHGAVLKSNHFADVYVANALIAMYAKCGRMEDAGRVFESMLCRDYVSW 317
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G N +A+ F +M + PD +V +++A + +GK+VHAYAIR
Sbjct: 318 NTLLSGLVQNELYSDALNYFRDMQNSGQKPDQVSVLNLIAASGRSGNLLKGKEVHAYAIR 377
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
G DS++ IG LVDMYAKC +K+ A++ + DL+S ++ YA + E I
Sbjct: 378 NGLDSNMQIGNTLVDMYAKCCCVKYMGHAFECMHEKDLISWTTIIAGYAQNEFHLEAINL 437
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSR 480
FR++ G D + S L AC S F + Y K L +++
Sbjct: 438 FRKVQVKGMDVDPMMIGSVLRACSGLKS----RNFIREIHGYVFKRDLADIMLQNAIVNV 493
Query: 481 AGELGE------AYEFIKKIPMAPDSVMWGALLGGCVSHG 514
GE+G A+E I+ + D V W +++ CV +G
Sbjct: 494 YGEVGHIDYARRAFESIR----SKDIVSWTSMITCCVHNG 529
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 103/429 (24%), Positives = 191/429 (44%), Gaps = 71/429 (16%)
Query: 98 SSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSI 157
S +L C + L G++ H + ++ + F+ LV +Y +CG + A+K+F
Sbjct: 50 SLLLDLCVAAKALPQGQQLHALLLKSHL--SAFLATKLVLMYGKCGSLRDAVKVF----- 102
Query: 158 KNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSM 217
D+M +R I SWN+++ +V + Y EA +
Sbjct: 103 --------------------------DEMS----ERTIFSWNALMGAFVSSGKYLEAIEL 132
Query: 218 FRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYC 277
++D+ + G+ + TF SVL AC + R G EIH +A+ G FV AL+ MY
Sbjct: 133 YKDMRVL-GVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGYGEFVFVCNALIAMYG 191
Query: 278 RYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWN--------------AMQLFSEM 323
+ DL A++ FD G M E + + +WN A+ LF M
Sbjct: 192 KCGDLGGARVLFD---------GIMME---KEDTVSWNSIISAHVAEGNCLEALSLFRRM 239
Query: 324 LSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSL 383
+ + + YT L + ++ G +H ++ + +DV++ AL+ MYAKCG +
Sbjct: 240 QEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKSNHFADVYVANALIAMYAKCGRM 299
Query: 384 KHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSAC 443
+ A ++ + D VS N +L+ + + + +FR + SG +PD +S L+ ++A
Sbjct: 300 EDAGRVFESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQKPDQVSVLNLIAAS 359
Query: 444 VHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSR---AGELGEAYEFIKKIPMAPDS 500
+G++ G E + +++ +VD+ ++ +G A+E + + D
Sbjct: 360 GRSGNLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKCCCVKYMGHAFECMHE----KDL 415
Query: 501 VMWGALLGG 509
+ W ++ G
Sbjct: 416 ISWTTIIAG 424
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 152/337 (45%), Gaps = 41/337 (12%)
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C +L +G+++HAL + L + F+ LV MY + L A FDE+
Sbjct: 56 CVAAKALPQGQQLHALLLKSHLSA--FLATKLVLMYGKCGSLRDAVKVFDEMS------- 106
Query: 301 KMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSSLA 346
E +++WNA+ +L+ +M L + D T +L AC +L
Sbjct: 107 -------ERTIFSWNALMGAFVSSGKYLEAIELYKDMRVLGVAIDACTFPSVLKACGALG 159
Query: 347 TMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRI--STPDLVSQNAM 404
G ++H A++CGY V + AL+ MY KCG L AR+ + I D VS N++
Sbjct: 160 ESRLGAEIHGVAVKCGYGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSI 219
Query: 405 LTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDV 464
++A+ G+ E ++ FRR+ G + +F++AL +K G + +
Sbjct: 220 ISAHVAEGNCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKSNH 279
Query: 465 KPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAAD 524
+ ++ + ++ G + +A + + + D V W LL G V + E A +
Sbjct: 280 FADVYVANALIAMYAKCGRMEDAGRVFESM-LCRDYVSWNTLLSGLVQN---ELYSDALN 335
Query: 525 RLIELEPNNTG---NYVMLANLFAYAGRWSDLARTRQ 558
+++ N+G + V + NL A +GR +L + ++
Sbjct: 336 YFRDMQ--NSGQKPDQVSVLNLIAASGRSGNLLKGKE 370
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 83/180 (46%), Gaps = 3/180 (1%)
Query: 337 IILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTP 396
++L C + + +G+Q+HA ++ + + T LV MY KCGSL+ A + +S
Sbjct: 51 LLLDLCVAAKALPQGQQLHALLLKSHLSA--FLATKLVLMYGKCGSLRDAVKVFDEMSER 108
Query: 397 DLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFF 456
+ S NA++ A+ G E I ++ + G D +F S L AC G + G+E
Sbjct: 109 TIFSWNALMGAFVSSGKYLEAIELYKDMRVLGVAIDACTFPSVLKACGALGESRLGAEIH 168
Query: 457 DLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPM-APDSVMWGALLGGCVSHGN 515
+ + ++ + + G+LG A I M D+V W +++ V+ GN
Sbjct: 169 GVAVKCGYGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVAEGN 228
>gi|147812559|emb|CAN70631.1| hypothetical protein VITISV_020725 [Vitis vinifera]
Length = 713
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 189/603 (31%), Positives = 304/603 (50%), Gaps = 75/603 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G + + ++VF MP R N+V
Sbjct: 160 MYTKNGKIFEGRRVFHEMPMR------------------------------------NVV 183
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A+I G + GY++EA+ M +E ++ T + L ACA L+ G+E H
Sbjct: 184 SWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQA 243
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ GF + FV N L +Y +CG + L +F K S+
Sbjct: 244 MKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSM----------------------- 280
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDG-IEPTSFTFGSVLI 239
R ++SW ++I+ V + A F + MR+ + P +TF +V+
Sbjct: 281 ------------RDVVSWTTIITTLVQMGQEECAVQAF--IRMRESDVSPNEYTFAAVIS 326
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
CA++ + G+++HAL + LGL + V +++ MY + L ++ + F E+ + +
Sbjct: 327 GCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVS 386
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
G+ + A +L S M P + + +LSAC ++A +E GKQ+HAY +
Sbjct: 387 WSTIIAGYXQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVL 446
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
G + + +AL++MY KCGS++ A + D+VS AM+ YA HG+ +E I
Sbjct: 447 SIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSREVID 506
Query: 420 HFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLL 478
F +I G RPD ++F+ LSAC HAG + G +F+ M+ Y + PS +HY CM+DLL
Sbjct: 507 LFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFHYFNAMSKKYQISPSKEHYGCMIDLL 566
Query: 479 SRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYV 538
RAG L +A I+ +P D V+W LL C HG++E G+ A+R+++LEPN G ++
Sbjct: 567 CRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHGDVERGRRTAERILQLEPNCAGTHI 626
Query: 539 MLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYT 598
LAN++A G+W + A R+ MK + + K PG SWI+ +D + F A DRSH + E+IY
Sbjct: 627 TLANIYASKGKWREAADIRKLMKSKGVIKEPGWSWIKVKDLVFAFVAGDRSHPQGEDIYN 686
Query: 599 IID 601
++D
Sbjct: 687 MLD 689
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 163/345 (47%), Gaps = 5/345 (1%)
Query: 172 ENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTS 231
+ G++ AR +FD+M Q+ ISW ++ISGYV+ + EA +F+++ + G+
Sbjct: 61 KTGHLGNARRMFDKMS----QKDEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDP 116
Query: 232 FTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDE 291
F AC + + G+ +H A+ GL + FVG AL++MY + + + F E
Sbjct: 117 FILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHE 176
Query: 292 IENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG 351
+ + G Y A+ FSEM + D YT I L AC+ + G
Sbjct: 177 MPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYG 236
Query: 352 KQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMH 411
+++HA A++ G+D + L MY KCG L++ ++++S D+VS ++T
Sbjct: 237 REIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQM 296
Query: 412 GHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHY 471
G + + F R+ S P+ +F + +S C + I+ G + L+ + + SL
Sbjct: 297 GQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVE 356
Query: 472 TCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNL 516
++ + ++ G+L + ++ D V W ++ G G++
Sbjct: 357 NSIMTMYAKCGQLTSSSVIFHEMTR-RDIVSWSTIIAGYXQGGHV 400
>gi|356533814|ref|XP_003535453.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Glycine max]
Length = 782
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 208/653 (31%), Positives = 338/653 (51%), Gaps = 66/653 (10%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETP---- 57
Y K ++ A+ +F +P+ D V+ ++++A +A G + A + L N TP
Sbjct: 41 YCKSFNIPYARYLFDKIPKPDIVAATTMLSAYSAAGNIKLAHQ-------LFNATPMSIR 93
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARL-QKLSLGKEF 116
+ VS++A+I F+ + A+ + +M+ G P+ T SSVL A + + + + ++
Sbjct: 94 DTVSYNAMITAFSHSHDGHAALQLFVQMKRLGFVPDPFTFSSVLGALSLIADEETHCQQL 153
Query: 117 HGYITRNGFMSNPFVVNGLVDVYRRCGD---------MLSALKIFSKFSI--KNEVSCNT 165
H + + G +S P V+N L+ Y C M +A K+F + ++E + T
Sbjct: 154 HCEVFKWGALSVPSVLNALMSCYVSCASSPLVNSCVLMAAARKLFDEAPPGRRDEPAWTT 213
Query: 166 IIVGYCENGNVAEARELFDQM-EHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMR 224
II GY N ++ AREL + M +H+ V +WN+MISGYV Y+EAF + R +
Sbjct: 214 IIAGYVRNDDLVAARELLEGMTDHIAV-----AWNAMISGYVHRGFYEEAFDLLRRM-HS 267
Query: 225 DGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTF----VGGALVEMYCRYQ 280
GI+ +T+ SV+ A ++ G+++HA + +Q V AL+ +Y R
Sbjct: 268 LGIQLDEYTYTSVISAASNAGLFNIGRQVHAYVLRTVVQPSGHFVLSVNNALITLYTRCG 327
Query: 281 DLVAAQMAFDE---------------------IENIENLLGKMKE----------DGFEP 309
LV A+ FD+ IE ++ +M G
Sbjct: 328 KLVEARRVFDKMPVKDLVSWNAILSGCVNARRIEEANSIFREMPVRSLLTWTVMISGLAQ 387
Query: 310 NVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHI 369
N + ++LF++M L P Y +++CS L +++ G+Q+H+ I+ G+DS + +
Sbjct: 388 NGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASCSVLGSLDNGQQLHSQIIQLGHDSSLSV 447
Query: 370 GTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGF 429
G AL+ MY++CG ++ A + + D VS NAM+ A A HGHG + I + ++L
Sbjct: 448 GNALITMYSRCGLVEAADTVFLTMPYVDSVSWNAMIAALAQHGHGVQAIQLYEKMLKEDI 507
Query: 430 RPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAY 488
PD I+FL+ LSAC HAG +K G +FD M Y + P HY+ ++DLL RAG EA
Sbjct: 508 LPDRITFLTILSACSHAGLVKEGRHYFDTMRVCYGITPEEDHYSRLIDLLCRAGMFSEAK 567
Query: 489 EFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAG 548
+ +P P + +W ALL GC HGN+E G AADRL+EL P G Y+ L+N++A G
Sbjct: 568 NVTESMPFEPGAPIWEALLAGCWIHGNMELGIQAADRLLELMPQQDGTYISLSNMYAALG 627
Query: 549 RWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
+W ++AR R+ M++R + K PGCSWIE + +H F D H +Y ++
Sbjct: 628 QWDEVARVRKLMRERGVKKEPGCSWIEVENMVHVFLVDDAVHPEVHAVYRYLE 680
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 120/433 (27%), Positives = 211/433 (48%), Gaps = 18/433 (4%)
Query: 1 MYGKCGSLDDAKKVFKMMP--ERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPN 58
+ C + A+K+F P RD +W +++ N ++ A E LE M+ D+
Sbjct: 184 LVNSCVLMAAARKLFDEAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEGMT--DHIA-- 239
Query: 59 LVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHG 118
V+W+A+I G+ G+ EEA +L RM + G++ + T +SV+ A + ++G++ H
Sbjct: 240 -VAWNAMISGYVHRGFYEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHA 298
Query: 119 YITRNGFM-SNPFVV---NGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
Y+ R S FV+ N L+ +Y RCG ++ A ++F K +K+ VS N I+ G
Sbjct: 299 YVLRTVVQPSGHFVLSVNNALITLYTRCGKLVEARRVFDKMPVKDLVSWNAILSGCVNAR 358
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTF 234
+ EA +F +M R +++W MISG N +E +F + + +G+EP + +
Sbjct: 359 RIEEANSIFREMP----VRSLLTWTVMISGLAQNGFGEEGLKLFNQMKL-EGLEPCDYAY 413
Query: 235 GSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIEN 294
+ +C+ + SL G+++H+ I LG S VG AL+ MY R + AA F +
Sbjct: 414 AGAIASCSVLGSLDNGQQLHSQIIQLGHDSSLSVGNALITMYSRCGLVEAADTVFLTMPY 473
Query: 295 IENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV 354
++++ + + A+QL+ +ML D+ PD T ILSACS ++ G+
Sbjct: 474 VDSVSWNAMIAALAQHGHGVQAIQLYEKMLKEDILPDRITFLTILSACSHAGLVKEGRHY 533
Query: 355 HAYAIRC-GYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNAMLTAYAMHG 412
C G + + L+D+ + G A+ + + P A+L +HG
Sbjct: 534 FDTMRVCYGITPEEDHYSRLIDLLCRAGMFSEAKNVTESMPFEPGAPIWEALLAGCWIHG 593
Query: 413 HGKEGIAHFRRIL 425
+ + GI R+L
Sbjct: 594 NMELGIQAADRLL 606
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 121/489 (24%), Positives = 200/489 (40%), Gaps = 82/489 (16%)
Query: 105 ARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCN 164
A+L S + H +I +GF P ++N L+D Y + ++ A +F K + V+
Sbjct: 7 AQLSHTSFARAVHAHILTSGFKPFPLIINRLIDHYCKSFNIPYARYLFDKIPKPDIVAAT 66
Query: 165 TIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMR 224
T++ Y GN+ A +LF+ + + R +S+N+MI+ + + A +F + R
Sbjct: 67 TMLSAYSAAGNIKLAHQLFNATP-MSI-RDTVSYNAMITAFSHSHDGHAALQLFVQ-MKR 123
Query: 225 DGIEPTSFTFGSVLIACADM-NSLRKGKEIHALAIALGLQSDTFVGGALVEMY--CRYQD 281
G P FTF SVL A + + + +++H G S V AL+ Y C
Sbjct: 124 LGFVPDPFTFSSVLGALSLIADEETHCQQLHCEVFKWGALSVPSVLNALMSCYVSCASSP 183
Query: 282 LV-------AAQMAFDE------------------IENIENLLGKMKEDGFEPNV-YTWN 315
LV AA+ FDE + N + + + +G ++ WN
Sbjct: 184 LVNSCVLMAAARKLFDEAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEGMTDHIAVAWN 243
Query: 316 AM--------------QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRC 361
AM L M SL + D YT ++SA S+ G+QVHAY +R
Sbjct: 244 AMISGYVHRGFYEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYVLRT 303
Query: 362 GYDSDVH----IGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNA-------------- 403
H + AL+ +Y +CG L AR + ++ DLVS NA
Sbjct: 304 VVQPSGHFVLSVNNALITLYTRCGKLVEARRVFDKMPVKDLVSWNAILSGCVNARRIEEA 363
Query: 404 -----------------MLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHA 446
M++ A +G G+EG+ F ++ G P ++ A+++C
Sbjct: 364 NSIFREMPVRSLLTWTVMISGLAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASCSVL 423
Query: 447 GSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGAL 506
GS+ G + + SL ++ + SR G + A +P DSV W A+
Sbjct: 424 GSLDNGQQLHSQIIQLGHDSSLSVGNALITMYSRCGLVEAADTVFLTMPYV-DSVSWNAM 482
Query: 507 LGGCVSHGN 515
+ HG+
Sbjct: 483 IAALAQHGH 491
>gi|297817672|ref|XP_002876719.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322557|gb|EFH52978.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1005
Score = 338 bits (866), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 203/572 (35%), Positives = 308/572 (53%), Gaps = 43/572 (7%)
Query: 27 NSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQ 86
N+++ A G +LEA L M++ D +V+W+++I G+ QN +EA+ M
Sbjct: 303 NALIAMYARCGKMLEAGRILRLMNNAD-----VVTWNSLIKGYVQNLMYKEALQFFCDMI 357
Query: 87 AEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDML 146
A G +P+ +L+SV+ A RL L G E H Y+ ++G+ SN V N L+D+Y +C
Sbjct: 358 AAGHKPDEVSLTSVIAASGRLSNLLAGMELHAYVIKHGWDSNLLVGNTLIDMYSKC---- 413
Query: 147 SALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYV 206
N R M H ++ +ISW ++I+GY
Sbjct: 414 --------------------------NLTCYMGRAFL--MMH---EKDLISWTTIIAGYA 442
Query: 207 DNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDT 266
N + EA +FRD+ + +E GS+L AC+ + S+ KEIH + GL DT
Sbjct: 443 LNDCHVEALQLFRDV-AKKRMEIDEMMLGSILRACSVLKSMLIVKEIHCHILRKGL-IDT 500
Query: 267 FVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSL 326
+ LV++Y + +++ A F+ I+ + + N A++LF M
Sbjct: 501 VIQNELVDVYGKCRNMGYASRVFESIKGKDVVSWTSMISSSALNGNENEAVELFRRMAET 560
Query: 327 DLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHA 386
L D + ILSA +SL+ +++G+++H Y +R G+ + I A+VDMYA CG L+ A
Sbjct: 561 GLLADSVALLCILSAAASLSALKKGREIHGYLLRKGFCLEGSIAVAVVDMYACCGDLQSA 620
Query: 387 RLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHA 446
+ + RI L+ +M+ AY MHG GK + F ++ PDHISFL+ L AC HA
Sbjct: 621 KAVFDRIERKGLLQYTSMINAYGMHGCGKASVELFNKMRHENVSPDHISFLALLYACSHA 680
Query: 447 GSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGA 505
G + G F +M Y ++P +HY C+VD+L RA + EA+EF+K + P + +W A
Sbjct: 681 GLLDEGRRFLKIMELEYKLEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTTEVWCA 740
Query: 506 LLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRM 565
LL C SH E G+IAA RL+ELEP N GN V+++N+FA GRW+D+ + R KMK M
Sbjct: 741 LLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGM 800
Query: 566 HKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
K PGCSWIE ++HKF A D+SH ++EIY
Sbjct: 801 EKHPGCSWIEMDGKVHKFTARDKSHPETKEIY 832
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 116/455 (25%), Positives = 203/455 (44%), Gaps = 37/455 (8%)
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+A+IG + NG A+ + M+ EG+ + + +L AC +L+ + G E H +
Sbjct: 129 AWNALIGAYVSNGEPASALFIYRNMRVEGVPLDLYSFPVLLKACGKLRDIRSGTELHCML 188
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ GF S F+VN LV +Y + D LSA A+
Sbjct: 189 VKLGFNSTGFIVNALVSMYAKT-DHLSA------------------------------AK 217
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LFD + G + WNS++S Y + E +FR++ M G S+T S L A
Sbjct: 218 RLFDASQEKG---DAVLWNSILSSYSTSGKSLETLQLFREMQM-TGPASNSYTIVSALTA 273
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C + + GKEIHA + + +V AL+ MY R ++ A + N + +
Sbjct: 274 CEGFSYAKLGKEIHAAVLKSTHSFEVYVCNALIAMYARCGKMLEAGRILRLMNNADVVTW 333
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G+ N+ A+Q F +M++ PD ++ +++A L+ + G ++HAY I+
Sbjct: 334 NSLIKGYVQNLMYKEALQFFCDMIAAGHKPDEVSLTSVIAASGRLSNLLAGMELHAYVIK 393
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
G+DS++ +G L+DMY+KC + A+ + DL+S ++ YA++ E +
Sbjct: 394 HGWDSNLLVGNTLIDMYSKCNLTCYMGRAFLMMHEKDLISWTTIIAGYALNDCHVEALQL 453
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSR 480
FR + D + S L AC S+ E + + ++ +VD+ +
Sbjct: 454 FRDVAKKRMEIDEMMLGSILRACSVLKSMLIVKEIHCHILRKGLIDTVIQNE-LVDVYGK 512
Query: 481 AGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
+G A + I D V W +++ +GN
Sbjct: 513 CRNMGYASRVFESIK-GKDVVSWTSMISSSALNGN 546
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 164/343 (47%), Gaps = 13/343 (3%)
Query: 171 CENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPT 230
C ++FD+M R +WN++I YV N A ++R++ + +G+
Sbjct: 107 CGKSRALSQEKVFDEMR----DRTAFAWNALIGAYVSNGEPASALFIYRNMRV-EGVPLD 161
Query: 231 SFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFD 290
++F +L AC + +R G E+H + + LG S F+ ALV MY + L AA+ FD
Sbjct: 162 LYSFPVLLKACGKLRDIRSGTELHCMLVKLGFNSTGFIVNALVSMYAKTDHLSAAKRLFD 221
Query: 291 -EIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATME 349
E + +L + + + +QLF EM + YT+ L+AC + +
Sbjct: 222 ASQEKGDAVLWNSILSSYSTSGKSLETLQLFREMQMTGPASNSYTIVSALTACEGFSYAK 281
Query: 350 RGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYA 409
GK++HA ++ + +V++ AL+ MYA+CG + A + ++ D+V+ N+++ Y
Sbjct: 282 LGKEIHAAVLKSTHSFEVYVCNALIAMYARCGKMLEAGRILRLMNNADVVTWNSLIKGYV 341
Query: 410 MHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLK 469
+ KE + F ++A+G +PD +S S ++A ++ G E + + +L
Sbjct: 342 QNLMYKEALQFFCDMIAAGHKPDEVSLTSVIAASGRLSNLLAGMELHAYVIKHGWDSNLL 401
Query: 470 HYTCMVDLLSRAG---ELGEAYEFIKKIPMAPDSVMWGALLGG 509
++D+ S+ +G A+ + + D + W ++ G
Sbjct: 402 VGNTLIDMYSKCNLTCYMGRAFLMMHE----KDLISWTTIIAG 440
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 102/229 (44%), Gaps = 36/229 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+YGKC ++ A +VF+ + +D VSW S++++ A NG NE
Sbjct: 509 VYGKCRNMGYASRVFESIKGKDVVSWTSMISSSALNG----------------NEN---- 548
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
EA+ + RM GL ++ L +L A A L L G+E HGY+
Sbjct: 549 ----------------EAVELFRRMAETGLLADSVALLCILSAAASLSALKKGREIHGYL 592
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R GF + +VD+Y CGD+ SA +F + K + ++I Y +G +
Sbjct: 593 LRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKASV 652
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEP 229
ELF++M H V IS+ +++ L DE + + + +EP
Sbjct: 653 ELFNKMRHENVSPDHISFLALLYACSHAGLLDEGRRFLKIMELEYKLEP 701
>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 672
Score = 338 bits (866), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 181/559 (32%), Positives = 304/559 (54%), Gaps = 47/559 (8%)
Query: 55 ETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGK 114
+ ++ SW+++I F ++G +A+ M+ L PN T + +C+ L L GK
Sbjct: 47 DKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSLYDLCAGK 106
Query: 115 EFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
+ H G+ S+ FV + L+D+Y +CG +
Sbjct: 107 QIHQQAFVFGYGSDIFVASALIDMYSKCGYL----------------------------- 137
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIE------ 228
+AR+LFD++ +R ++SW SMISGYV N EA +F++ L+ D +
Sbjct: 138 --NDARKLFDEIP----ERNVVSWTSMISGYVQNERAREAVFLFKEFLLVDETDYDEIVG 191
Query: 229 ----PTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVA 284
S G V+ ACA + + +H LA+ G + VG L++ Y + ++
Sbjct: 192 VGVGVDSVLLGCVISACARVCVKSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISV 251
Query: 285 AQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSL-DLTPDIYTVGIILSACS 343
++ FD +E + + N + A LFS+M+ ++ + T+ +L AC+
Sbjct: 252 SRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACA 311
Query: 344 SLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNA 403
++ GK +H ++ + ++ +GT++VDMY KCG ++ AR A+ R+ ++ S
Sbjct: 312 HSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTV 371
Query: 404 MLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYY 462
M+ Y MHGHGKE + F ++ G +P++I+F+S L+AC HAG +K G +F+ M +
Sbjct: 372 MVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACSHAGLLKEGWHWFNKMKCEF 431
Query: 463 DVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIA 522
DV+P ++HY+CMVDLL RAG L EAY I+++ + PD ++WG+LLG C H N+E G+I+
Sbjct: 432 DVEPGIEHYSCMVDLLGRAGYLKEAYGLIQEMKVKPDFIVWGSLLGACRIHKNVELGEIS 491
Query: 523 ADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHK 582
A +L +L+P+N G YV+L+N++A AGRW D+ R R MK+ + K+PG S +E + +H
Sbjct: 492 ARKLFKLDPSNCGYYVLLSNIYADAGRWDDVERMRILMKNHGLLKTPGYSIVEHKGRVHV 551
Query: 583 FRASDRSHDRSEEIYTIID 601
F D+ H + E+IY +D
Sbjct: 552 FLVGDKEHPQHEKIYEYLD 570
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 113/429 (26%), Positives = 196/429 (45%), Gaps = 66/429 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG L+DA+K+F +PER+ VSW S+++ N EA+ + +D
Sbjct: 130 MYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQNERAREAVFLFKEFLLVD------- 182
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+ YDE + G+ ++ L V+ ACAR+ S+ + HG
Sbjct: 183 ----------ETDYDE--------IVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLA 224
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ GF V N L+D Y +CG++ + K+F + S N++I Y +NG EA
Sbjct: 225 VKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAF 284
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LF M V+RG + +N++ T +VL+A
Sbjct: 285 SLFSDM----VKRGEVRYNAV-------------------------------TLSAVLLA 309
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA +L+ GK IH + + L+ + VG ++V+MYC+ + A+ AFD ++
Sbjct: 310 CAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSW 369
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAY-AI 359
+ G+ + + AM++F EM+ + P+ T +L+ACS ++ G H + +
Sbjct: 370 TVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACSHAGLLKEG--WHWFNKM 427
Query: 360 RCGYDSDVHIG--TALVDMYAKCGSLKHAR-LAYKRISTPDLVSQNAMLTAYAMHGHGKE 416
+C +D + I + +VD+ + G LK A L + PD + ++L A +H + +
Sbjct: 428 KCEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLIQEMKVKPDFIVWGSLLGACRIHKNVEL 487
Query: 417 GIAHFRRIL 425
G R++
Sbjct: 488 GEISARKLF 496
>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
bursa-pastoris]
Length = 706
Score = 338 bits (866), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 185/547 (33%), Positives = 304/547 (55%), Gaps = 10/547 (1%)
Query: 55 ETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGK 114
+ PNL+ W+ + G + A+ + M + GL PN+ T +L ACA+ + G+
Sbjct: 64 QEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREGQ 123
Query: 115 EFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
+ HG++ + G + +V L+ +Y + G A K+F + S ++ VS +I GY NG
Sbjct: 124 QIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNG 183
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTF 234
+ A+++FD++ + ++SWN++ISGY + Y EA +F+++ M+ ++P T
Sbjct: 184 YIXSAQKMFDEIP----VKDVVSWNALISGYAETGNYKEALELFKEM-MKTNVKPDESTM 238
Query: 235 GSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIEN 294
+VL ACA S+ G+++H+ G S+ + AL+++Y + ++ A F+ +
Sbjct: 239 VTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSY 298
Query: 295 IENLLGKMKEDGF-EPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ 353
+ + G+ N+Y A+ LF EML +P+ T+ IL AC+ L ++ G+
Sbjct: 299 KDVISWNTLIGGYTHMNLYK-EALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRW 357
Query: 354 VHAYAIR--CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMH 411
+H Y + G + + T+L+DMYAKCG ++ A+ + + L S NAM+ +AMH
Sbjct: 358 IHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMH 417
Query: 412 GHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKH 470
G F R+ G PD I+F+ LSAC H+G + G F M Y + P L+H
Sbjct: 418 GRANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTEDYKITPKLEH 477
Query: 471 YTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELE 530
Y CM+DLL +G EA E I + M PD V+W +LL C HGN+E G+ A LI++E
Sbjct: 478 YGCMIDLLGHSGLFKEAEEMINSMEMDPDGVIWCSLLKACKMHGNVELGESFAQNLIKIE 537
Query: 531 PNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSH 590
P N+G+YV+L+N++A AGRW+++A+ R + D+ M K PGCS IE +H+F D+ H
Sbjct: 538 PKNSGSYVLLSNIYATAGRWNEVAKRRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKLH 597
Query: 591 DRSEEIY 597
R+ EIY
Sbjct: 598 PRNREIY 604
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 122/425 (28%), Positives = 201/425 (47%), Gaps = 53/425 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G +DA+KVF RD VS+ +++ A+NG + A + + + D +V
Sbjct: 147 MYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGYIXSAQKMFDEIPVKD-----VV 201
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A+I G+ + G +EA+ + M ++P+ T+ +VL ACA+ + LG++ H +I
Sbjct: 202 SWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACAQSASIELGRQVHSWI 261
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+GF SN +VN L+D+Y +CG++ +A +F S K+ +S NT+I GY
Sbjct: 262 DDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVISWNTLIGGYT--------- 312
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
H+ +LY EA +F+++L R G P T S+L A
Sbjct: 313 -------HM-------------------NLYKEALLLFQEML-RSGESPNEVTMLSILPA 345
Query: 241 CADMNSLRKGKEIHALAIAL--GLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
CA + ++ G+ IH G+ + + + +L++MY + D+ AAQ FD + N
Sbjct: 346 CAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLS 405
Query: 299 LGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV---- 354
GF + A +FS M + PD T +LSACS ++ G+ +
Sbjct: 406 SWNAMIFGFAMHGRANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGRHIFRSM 465
Query: 355 -HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST-PDLVSQNAMLTAYAMHG 412
Y I + H G ++D+ G K A + PD V ++L A MHG
Sbjct: 466 TEDYKITPKLE---HYG-CMIDLLGHSGLFKEAEEMINSMEMDPDGVIWCSLLKACKMHG 521
Query: 413 HGKEG 417
+ + G
Sbjct: 522 NVELG 526
Score = 38.5 bits (88), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 36/191 (18%), Positives = 79/191 (41%), Gaps = 4/191 (2%)
Query: 339 LSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVD---MYAKCGSLKHARLAYKRIST 395
LS + T++ + +HA I+ G + + + L++ + L +A + I
Sbjct: 6 LSLLHNCKTLQSLRIIHAKMIKTGLHNTNYALSKLIEFSVLSPHFDGLTYAISVFDSIQE 65
Query: 396 PDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEF 455
P+L+ N M +A+ + + +++ G P+ +F L AC + + + G +
Sbjct: 66 PNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREGQQI 125
Query: 456 FDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
+ L +T ++ + + G +A + + D V + AL+ G S+G
Sbjct: 126 HGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQ-SSHRDVVSYTALIKGYASNGY 184
Query: 516 LEFGQIAADRL 526
+ Q D +
Sbjct: 185 IXSAQKMFDEI 195
>gi|297745590|emb|CBI40755.3| unnamed protein product [Vitis vinifera]
Length = 789
Score = 338 bits (866), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 195/637 (30%), Positives = 313/637 (49%), Gaps = 83/637 (13%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG++D A+KVF P WNS++ + G V +ALE +M D V
Sbjct: 158 MYIKCGAMDFAQKVFCRTPNPSLFCWNSMIYGYSKYGSVKKALELFAKMPERDT-----V 212
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ +I +Q+G+ E + M +G PN+ T +SVL AC + L G H I
Sbjct: 213 SWNTMISILSQHGFGAETLNTFLEMWNQGFRPNSMTYASVLSACTSIYDLEWGAHLHARI 272
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R + + GL+D+Y +CG + SA R
Sbjct: 273 VRMEPCLDVYAGCGLIDMYAKCGRLESA-------------------------------R 301
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRD-GIEPTSFTFGSVLI 239
++FD + + +SW S+I G +EA +F MR+ + FT +VL
Sbjct: 302 QVFDGL----TEHNAVSWTSLIGGVAQAGFQEEALVLFNQ--MREVPVASDQFTLATVLG 355
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFD--------- 290
C + G+++HA I GL S V ALV MY + D+ A AF+
Sbjct: 356 VCLSQKDISIGEQLHAHTITRGLDSSVPVANALVTMYAKCGDVWKANHAFELMPIRDIIS 415
Query: 291 ------------EIENIENLLGKMKEDGFEPNVYTWNAM--------------QLFSEML 324
++E KM E NV +WN+M +++ +ML
Sbjct: 416 WTAMITAFSQAGDVEKAREYFDKMPER----NVISWNSMLATYMQRGYWEEGLKVYIQML 471
Query: 325 SLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLK 384
+ D T +SAC+ LA + G Q+ A A + G+ S+V + ++V MY++CG ++
Sbjct: 472 REGVKTDWITFSTSISACADLAVLILGNQILAQAEKLGFSSNVSVANSVVTMYSRCGQIE 531
Query: 385 HARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACV 444
A+ + I +LVS NAM+ YA +G G++ I F ++L G PD IS++S LS C
Sbjct: 532 EAQKMFSSIVMKNLVSWNAMMAGYAQNGQGRKVIEIFEKMLNIGNVPDQISYVSVLSGCS 591
Query: 445 HAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMW 503
H+G + G +F M + + P +H+ CMVDLL RAG+L +A I ++P P++ +W
Sbjct: 592 HSGFVSEGQYYFLSMTKDHGISPMSEHFVCMVDLLGRAGQLEQAKNLINQMPFKPNAAIW 651
Query: 504 GALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDR 563
GALL C HGN + ++A L+EL+ G+Y +LAN+++ +G+ + R+ M+D+
Sbjct: 652 GALLAACRIHGNTKLAELAVKNLLELDAEGPGSYCLLANIYSESGKIQGVTNVRKLMRDK 711
Query: 564 RMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTII 600
+ K+PGCSWIE + +H F D +H + ++++ ++
Sbjct: 712 GVRKNPGCSWIEVDNRVHVFTVDDTNHPQIKDVHRML 748
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 148/551 (26%), Positives = 255/551 (46%), Gaps = 74/551 (13%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY CG + DA +VF + + SWN++++ A +G + EA + E+M D+ V
Sbjct: 48 MYSNCGLISDAYRVFGGIMFPNVYSWNTMISGFADSGQMREAEKLFEKMPERDS-----V 102
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW++++ G+ NG L + + A L L L + HG+
Sbjct: 103 SWNSMMSGYFHNG----------------------ELEATIKASGSLGYLKLALQLHGFA 140
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ F + V ++D+Y +CG M A K+F + + N++I GY + G+V +A
Sbjct: 141 EKFDFGIDTCVETSVLDMYIKCGAMDFAQKVFCRTPNPSLFCWNSMIYGYSKYGSVKKAL 200
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
ELF +M +R +SWN+MIS + E + F ++ G P S T+ SVL A
Sbjct: 201 ELFAKMP----ERDTVSWNTMISILSQHGFGAETLNTFLEMW-NQGFRPNSMTYASVLSA 255
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE-----NI 295
C + L G +HA + + D + G L++MY + L +A+ FD + +
Sbjct: 256 CTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCGRLESARQVFDGLTEHNAVSW 315
Query: 296 ENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVH 355
+L+G + + GF+ A+ LF++M + + D +T+ +L C S + G+Q+H
Sbjct: 316 TSLIGGVAQAGFQE-----EALVLFNQMREVPVASDQFTLATVLGVCLSQKDISIGEQLH 370
Query: 356 AYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTA-------- 407
A+ I G DS V + ALV MYAKCG + A A++ + D++S AM+TA
Sbjct: 371 AHTITRGLDSSVPVANALVTMYAKCGDVWKANHAFELMPIRDIISWTAMITAFSQAGDVE 430
Query: 408 -----------------------YAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACV 444
Y G+ +EG+ + ++L G + D I+F +++SAC
Sbjct: 431 KAREYFDKMPERNVISWNSMLATYMQRGYWEEGLKVYIQMLREGVKTDWITFSTSISACA 490
Query: 445 HAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWG 504
+ G++ ++ +V + SR G++ EA + I M + V W
Sbjct: 491 DLAVLILGNQILAQAEKLGFSSNVSVANSVVTMYSRCGQIEEAQKMFSSIVM-KNLVSWN 549
Query: 505 ALLGGCVSHGN 515
A++ G +G
Sbjct: 550 AMMAGYAQNGQ 560
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 106/463 (22%), Positives = 197/463 (42%), Gaps = 67/463 (14%)
Query: 101 LPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNE 160
+ CA L+ + + ++ H + G S+ F+ N L+++Y CG + A ++F N
Sbjct: 11 MKECASLRSIPIARKLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFGGIMFPNV 70
Query: 161 VSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRD 220
S NT+I G+ ++G + EA +LF++M +R +SWNSM+SGY N +
Sbjct: 71 YSWNTMISGFADSGQMREAEKLFEKMP----ERDSVSWNSMMSGYFHNGELE-------- 118
Query: 221 LLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMY---- 276
+ + A + L+ ++H A DT V ++++MY
Sbjct: 119 ---------------ATIKASGSLGYLKLALQLHGFAEKFDFGIDTCVETSVLDMYIKCG 163
Query: 277 ---------CR--------YQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAM-- 317
CR + ++ + ++ L KM E + +WN M
Sbjct: 164 AMDFAQKVFCRTPNPSLFCWNSMIYGYSKYGSVKKALELFAKMPER----DTVSWNTMIS 219
Query: 318 ------------QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDS 365
F EM + P+ T +LSAC+S+ +E G +HA +R
Sbjct: 220 ILSQHGFGAETLNTFLEMWNQGFRPNSMTYASVLSACTSIYDLEWGAHLHARIVRMEPCL 279
Query: 366 DVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRIL 425
DV+ G L+DMYAKCG L+ AR + ++ + VS +++ A G +E + F ++
Sbjct: 280 DVYAGCGLIDMYAKCGRLESARQVFDGLTEHNAVSWTSLIGGVAQAGFQEEALVLFNQMR 339
Query: 426 ASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELG 485
D + + L C+ I G + + S+ +V + ++ G++
Sbjct: 340 EVPVASDQFTLATVLGVCLSQKDISIGEQLHAHTITRGLDSSVPVANALVTMYAKCGDVW 399
Query: 486 EAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIE 528
+A + +P+ D + W A++ G++E + D++ E
Sbjct: 400 KANHAFELMPIR-DIISWTAMITAFSQAGDVEKAREYFDKMPE 441
>gi|356498879|ref|XP_003518275.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 754
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 183/608 (30%), Positives = 313/608 (51%), Gaps = 84/608 (13%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KCG+++DA++VF+ MP R N+V
Sbjct: 108 VYAKCGNMEDARRVFENMPRR------------------------------------NVV 131
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+ ++ GF QN + AI + M G P+ TLS+VL AC+ LQ L LG +FH YI
Sbjct: 132 AWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSIYTLSAVLHACSSLQSLKLGDQFHAYI 191
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ + V + L +Y +CG + ALK FS+ KN
Sbjct: 192 IKYHLDFDTSVGSALCSLYSKCGRLEDALKAFSRIREKN--------------------- 230
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+ISW S +S DN + +F +++ D I+P FT S L
Sbjct: 231 --------------VISWTSAVSACGDNGAPVKGLRLFVEMISED-IKPNEFTLTSALSQ 275
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL-- 298
C ++ SL G ++ +L I G +S+ V +L+ +Y + +V A F+ ++++ +
Sbjct: 276 CCEIPSLELGTQVCSLCIKFGYESNLRVRNSLLYLYLKSGFIVEAHRFFNRMDDVSMVTW 335
Query: 299 ---------LGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATME 349
+ ++ +D A+++FS++ + PD++T+ +LS CS + +E
Sbjct: 336 NAMIAGHAQMMELTKDNLSACQRGSEALKIFSKLNQSGMKPDLFTLSSVLSVCSRMLAIE 395
Query: 350 RGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYA 409
+G+Q+HA I+ G+ SDV + T+L+ MY KCGS++ A A+ +ST +++ +M+T ++
Sbjct: 396 QGEQIHAQTIKTGFLSDVIVSTSLISMYNKCGSIERASKAFLEMSTRTMIAWTSMITGFS 455
Query: 410 MHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSL 468
HG ++ + F + +G RP+ ++F+ LSAC HAG + +F++M Y +KP +
Sbjct: 456 QHGMSQQALHIFEDMSLAGVRPNTVTFVGVLSACSHAGMVSQALNYFEIMQKKYKIKPVM 515
Query: 469 KHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIE 528
HY CMVD+ R G L +A FIKK+ P +W + GC SHGNLE G A+++L+
Sbjct: 516 DHYECMVDMFVRLGRLEQALNFIKKMNYEPSEFIWSNFIAGCRSHGNLELGFYASEQLLS 575
Query: 529 LEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDR 588
L+P + YV+L N++ A R+ D++R R+ M+ ++ K SWI +D+++ F+ +D+
Sbjct: 576 LKPKDPETYVLLLNMYLSADRFDDVSRVRKMMEVEKVGKLKDWSWISIKDKVYSFKTNDK 635
Query: 589 SHDRSEEI 596
+H S I
Sbjct: 636 THPPSSLI 643
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 119/473 (25%), Positives = 200/473 (42%), Gaps = 99/473 (20%)
Query: 79 IGMLFRMQAEGLEPNARTL-SSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVD 137
G + EG E + +L C + S + HG++ + G N FV++ LV+
Sbjct: 48 FGEALLLNKEGTEEEEKLFYVPLLQQCLDKRSYSGTQIVHGHVMKTGCHDNFFVMSFLVN 107
Query: 138 VYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIIS 197
VY +CG+M A ++F +N V+ T++VG+ +N A +F +M
Sbjct: 108 VYAKCGNMEDARRVFENMPRRNVVAWTTLMVGFVQNSQPKHAIHVFQEM----------- 156
Query: 198 WNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALA 257
+ G P+ +T +VL AC+ + SL+ G + HA
Sbjct: 157 -------------------------LYAGSYPSIYTLSAVLHACSSLQSLKLGDQFHAYI 191
Query: 258 IALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNA- 316
I L DT VG AL +Y + L A AF I E NV +W +
Sbjct: 192 IKYHLDFDTSVGSALCSLYSKCGRLEDALKAFSRIR--------------EKNVISWTSA 237
Query: 317 -------------MQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGY 363
++LF EM+S D+ P+ +T+ LS C + ++E G QV + I+ GY
Sbjct: 238 VSACGDNGAPVKGLRLFVEMISEDIKPNEFTLTSALSQCCEIPSLELGTQVCSLCIKFGY 297
Query: 364 DSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMH-----------G 412
+S++ + +L+ +Y K G + A + R+ +V+ NAM+ +A
Sbjct: 298 ESNLRVRNSLLYLYLKSGFIVEAHRFFNRMDDVSMVTWNAMIAGHAQMMELTKDNLSACQ 357
Query: 413 HGKEGIAHFRRILASGFRPDHISFLSALSAC-----------VHAGSIKTGSEFFDLMAY 461
G E + F ++ SG +PD + S LS C +HA +IKTG F
Sbjct: 358 RGSEALKIFSKLNQSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTG--FLS---- 411
Query: 462 YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
DV S T ++ + ++ G + A + ++ + W +++ G HG
Sbjct: 412 -DVIVS----TSLISMYNKCGSIERASKAFLEMS-TRTMIAWTSMITGFSQHG 458
>gi|225454363|ref|XP_002276073.1| PREDICTED: pentatricopeptide repeat-containing protein At2g46050,
mitochondrial [Vitis vinifera]
Length = 673
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 192/558 (34%), Positives = 307/558 (55%), Gaps = 49/558 (8%)
Query: 54 NETP--NLVSWSAVIGGFTQNGYDEEAIGMLF----RMQAEGLEPNARTLSSVLPACARL 107
+E P N+VSW+ +I G + + + F +M E + PN TL+ +L A L
Sbjct: 132 DEMPLKNVVSWNTLICGVVEGNCKFALVRLGFHYFRQMVLEMMAPNCITLNGLLRASIEL 191
Query: 108 QKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTII 167
+ + ++ H +I ++GF SN FV + LVD Y +KF
Sbjct: 192 NDVGICRQLHCFILKSGFDSNCFVGSALVDSY-------------AKF------------ 226
Query: 168 VGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMR-DG 226
G V EA+ FD++ R ++ WN M+S Y N + +AF +F+ LMR +G
Sbjct: 227 ------GLVDEAQSAFDEVS----SRDLVLWNVMVSCYALNGVQGKAFGVFK--LMRLEG 274
Query: 227 IEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQ 286
++ +FTF S++ +C + S GK++H L I L D V ALV+MY + +++ A+
Sbjct: 275 VKGDNFTFTSMINSCGVLGSCGLGKQVHGLIIRLSFDLDVLVASALVDMYSKNENIEDAR 334
Query: 287 MAFDE--IENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSS 344
AFD ++NI + + G+ + AM+L EM+ + PD + ILS+C +
Sbjct: 335 KAFDGMIVKNIVSWTTMIV--GYGQHGDGKEAMRLLQEMIRVYTYPDELALASILSSCGN 392
Query: 345 LATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAM 404
L+ QVHAY + G+++ + I ALV Y+KCGS+ A ++ ++ PD++S ++
Sbjct: 393 LSATSEVVQVHAYVVENGFEAFLSIANALVSAYSKCGSIGSAFQSFSSVAEPDIISWTSL 452
Query: 405 LTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYD 463
+ AYA HG KEG+ F ++L S RPD ++FL LSAC H G + G +F+LM Y
Sbjct: 453 MGAYAFHGLSKEGVEVFEKMLFSNVRPDKVAFLGVLSACAHGGFVLEGLHYFNLMINVYQ 512
Query: 464 VKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAA 523
+ P +HYTC++DLL RAG L EA + +P+ P S GA LG C H N+ + A+
Sbjct: 513 IMPDSEHYTCIIDLLGRAGFLDEAINLLTSMPVEPRSDTLGAFLGACKVHRNVGLARWAS 572
Query: 524 DRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKF 583
++L +EPN NY +++N++A G W D+AR R+ M++R K PGCSW+E E+H F
Sbjct: 573 EKLFVMEPNEPANYSLMSNMYASVGHWFDVARVRKLMRERCDFKVPGCSWMEIAGEVHTF 632
Query: 584 RASDRSHDRSEEIYTIID 601
+ D++H R+ ++Y ++D
Sbjct: 633 VSRDKTHPRAVQVYGMLD 650
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 110/424 (25%), Positives = 194/424 (45%), Gaps = 47/424 (11%)
Query: 98 SSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSI 157
S L A+L L GK+ H ++ + G + + N ++ VY +C + K+F + +
Sbjct: 77 SHALKISAKLGFLHGGKQLHAHVIKLGNCNLLSLQNQVLHVYVKCKEFNDVCKMFDEMPL 136
Query: 158 KNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDN----SLYDE 213
KN ++SWN++I G V+ +L
Sbjct: 137 KN-----------------------------------VVSWNTLICGVVEGNCKFALVRL 161
Query: 214 AFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALV 273
F FR +++ + + P T +L A ++N + +++H + G S+ FVG ALV
Sbjct: 162 GFHYFRQMVL-EMMAPNCITLNGLLRASIELNDVGICRQLHCFILKSGFDSNCFVGSALV 220
Query: 274 EMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIY 333
+ Y ++ + AQ AFDE+ + + +L + + N A +F M + D +
Sbjct: 221 DSYAKFGLVDEAQSAFDEVSSRDLVLWNVMVSCYALNGVQGKAFGVFKLMRLEGVKGDNF 280
Query: 334 TVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRI 393
T ++++C L + GKQVH IR +D DV + +ALVDMY+K +++ AR A+ +
Sbjct: 281 TFTSMINSCGVLGSCGLGKQVHGLIIRLSFDLDVLVASALVDMYSKNENIEDARKAFDGM 340
Query: 394 STPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGS 453
++VS M+ Y HG GKE + + ++ PD ++ S LS+C G++ S
Sbjct: 341 IVKNIVSWTTMIVGYGQHGDGKEAMRLLQEMIRVYTYPDELALASILSSC---GNLSATS 397
Query: 454 EFFDLMAYY---DVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGC 510
E + AY + L +V S+ G +G A++ + PD + W +L+G
Sbjct: 398 EVVQVHAYVVENGFEAFLSIANALVSAYSKCGSIGSAFQSFSSVA-EPDIISWTSLMGAY 456
Query: 511 VSHG 514
HG
Sbjct: 457 AFHG 460
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 90/386 (23%), Positives = 163/386 (42%), Gaps = 78/386 (20%)
Query: 20 ERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAI 79
+ +C +++V + A GLV EA + +SS D LV W+ ++ + NG +A
Sbjct: 210 DSNCFVGSALVDSYAKFGLVDEAQSAFDEVSSRD-----LVLWNVMVSCYALNGVQGKAF 264
Query: 80 GMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVY 139
G+ M+ EG++ + T +S++ +C L LGK+ HG I R F + V + LVD+Y
Sbjct: 265 GVFKLMRLEGVKGDNFTFTSMINSCGVLGSCGLGKQVHGLIIRLSFDLDVLVASALVDMY 324
Query: 140 RRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWN 199
+ ++ A K F +KN VS T+IVGY ++G+ EA L +M
Sbjct: 325 SKNENIEDARKAFDGMIVKNIVSWTTMIVGYGQHGDGKEAMRLLQEM------------- 371
Query: 200 SMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIA 259
+R P S+L +C ++++ + ++HA +
Sbjct: 372 -----------------------IRVYTYPDELALASILSSCGNLSATSEVVQVHAYVVE 408
Query: 260 LGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAM-- 317
G ++ + ALV Y + + +A +F + EP++ +W ++
Sbjct: 409 NGFEAFLSIANALVSAYSKCGSIGSAFQSFSSVA--------------EPDIISWTSLMG 454
Query: 318 ------------QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ-----VHAYAIR 360
++F +ML ++ PD +LSAC+ + G ++ Y I
Sbjct: 455 AYAFHGLSKEGVEVFEKMLFSNVRPDKVAFLGVLSACAHGGFVLEGLHYFNLMINVYQIM 514
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHA 386
D T ++D+ + G L A
Sbjct: 515 ----PDSEHYTCIIDLLGRAGFLDEA 536
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 141/311 (45%), Gaps = 34/311 (10%)
Query: 223 MRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDL 282
+ D SF+ ++ I+ A + L GK++HA I LG + + ++ +Y + ++
Sbjct: 66 LVDSCSTHSFSSHALKIS-AKLGFLHGGKQLHAHVIKLGNCNLLSLQNQVLHVYVKCKEF 124
Query: 283 VAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAM------------------QLFSEML 324
FDE+ NV +WN + F +M+
Sbjct: 125 NDVCKMFDEMP--------------LKNVVSWNTLICGVVEGNCKFALVRLGFHYFRQMV 170
Query: 325 SLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLK 384
+ P+ T+ +L A L + +Q+H + ++ G+DS+ +G+ALVD YAK G +
Sbjct: 171 LEMMAPNCITLNGLLRASIELNDVGICRQLHCFILKSGFDSNCFVGSALVDSYAKFGLVD 230
Query: 385 HARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACV 444
A+ A+ +S+ DLV N M++ YA++G + F+ + G + D+ +F S +++C
Sbjct: 231 EAQSAFDEVSSRDLVLWNVMVSCYALNGVQGKAFGVFKLMRLEGVKGDNFTFTSMINSCG 290
Query: 445 HAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWG 504
GS G + L+ + + +VD+ S+ + +A + + + + V W
Sbjct: 291 VLGSCGLGKQVHGLIIRLSFDLDVLVASALVDMYSKNENIEDARKAFDGM-IVKNIVSWT 349
Query: 505 ALLGGCVSHGN 515
++ G HG+
Sbjct: 350 TMIVGYGQHGD 360
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 60/148 (40%), Gaps = 38/148 (25%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNS--------------------------------- 28
Y KCGS+ A + F + E D +SW S
Sbjct: 425 YSKCGSIGSAFQSFSSVAEPDIISWTSLMGAYAFHGLSKEGVEVFEKMLFSNVRPDKVAF 484
Query: 29 --VVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQ 86
V++ACA G VLE L M ++ P+ ++ +I + G+ +EAI +L M
Sbjct: 485 LGVLSACAHGGFVLEGLHYFNLMINVYQIMPDSEHYTCIIDLLGRAGFLDEAINLLTSMP 544
Query: 87 AEGLEPNARTLSSVLPACARLQKLSLGK 114
+EP + TL + L AC + + L +
Sbjct: 545 ---VEPRSDTLGAFLGACKVHRNVGLAR 569
Score = 38.5 bits (88), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 40/206 (19%), Positives = 88/206 (42%), Gaps = 12/206 (5%)
Query: 339 LSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDL 398
L + L + GKQ+HA+ I+ G + + + ++ +Y KC + + ++
Sbjct: 80 LKISAKLGFLHGGKQLHAHVIKLGNCNLLSLQNQVLHVYVKCKEFNDVCKMFDEMPLKNV 139
Query: 399 VSQNAMLTAYAMHGHGK-----EGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGS 453
VS N ++ + G+ K G +FR+++ P+ I+ L A + +
Sbjct: 140 VSWNTLICG-VVEGNCKFALVRLGFHYFRQMVLEMMAPNCITLNGLLRASIELNDVGICR 198
Query: 454 EF--FDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCV 511
+ F L + +D + + +VD ++ G + EA ++ + D V+W ++ C
Sbjct: 199 QLHCFILKSGFDSNCFVG--SALVDSYAKFGLVDEAQSAFDEVS-SRDLVLWNVMV-SCY 254
Query: 512 SHGNLEFGQIAADRLIELEPNNTGNY 537
+ ++ +L+ LE N+
Sbjct: 255 ALNGVQGKAFGVFKLMRLEGVKGDNF 280
>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 776
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 190/602 (31%), Positives = 318/602 (52%), Gaps = 29/602 (4%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y + G + A+ +F MPERD VSWN ++ N + +A E ERM D + S
Sbjct: 100 YLRNGEFELARMLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFERMPERD-----VCS 154
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W+ ++ G+ QNG ++A + RM E N + +++L A + KL G
Sbjct: 155 WNTILSGYAQNGCVDDARRVFDRMP----EKNDVSWNALLSAYVQNSKLEEACVLFGSRE 210
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
+S ++ G V + ++ A + F +++ VS NTII GY +NG + EAR+
Sbjct: 211 NWALVSWNCLLGGFVKKKK----IVEARQFFDSMKVRDVVSWNTIITGYAQNGEIDEARQ 266
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
LFD+ + +W +M+SGY+ N + +EA +F + R+ + + G V
Sbjct: 267 LFDE----SPVHDVFTWTAMVSGYIQNRMVEEARELFDRMPERNEVSWNAMLAGYVQGER 322
Query: 242 ADMNSLRKGKEIHALAIALGLQS-DTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
+M KE+ + + + +T + G Y + + A+ FD++ + +
Sbjct: 323 VEM-----AKELFDVMPCRNVSTWNTMITG-----YAQCGKISEAKNLFDKMPKRDPVSW 372
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G+ + +++ A++LF M + + LS C+ + +E GKQ+H ++
Sbjct: 373 AAMIAGYSQSGHSYEALRLFVLMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVK 432
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
GY++ +G AL+ MY KCGS++ A +K ++ D+VS N M+ Y+ HG G+E +
Sbjct: 433 GGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEEALRF 492
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLS 479
F + G +PD + ++ LSAC H G + G ++F M Y V+P+ +HY CMVDLL
Sbjct: 493 FESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLG 552
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
RAG L EA+ +K +P PD+ +WG LLG HGN E + AAD++ +EP N+G YV+
Sbjct: 553 RAGLLEEAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVL 612
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTI 599
L+NL+A +GRW D+ + R +M+D+ + K PG SWIE +++ H F D H +EI+
Sbjct: 613 LSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAF 672
Query: 600 ID 601
++
Sbjct: 673 LE 674
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 99/418 (23%), Positives = 176/418 (42%), Gaps = 50/418 (11%)
Query: 133 NGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQ 192
N ++ Y R G+ A +F + ++ VS N +I GY N N+ +ARELF++M +
Sbjct: 94 NAMISGYLRNGEFELARMLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFERMP----E 149
Query: 193 RGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKE 252
R + SWN+++SGY N D+A +F + E ++ ++L A + L +
Sbjct: 150 RDVCSWNTILSGYAQNGCVDDARRVFDRM-----PEKNDVSWNALLSAYVQNSKLEEACV 204
Query: 253 IHALAIALGLQS-DTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNV 311
+ L S + +GG + + + +V A+ FD ++ + + G+ N
Sbjct: 205 LFGSRENWALVSWNCLLGG-----FVKKKKIVEARQFFDSMKVRDVVSWNTIITGYAQNG 259
Query: 312 YTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGK----------QVHAYAIRC 361
A QLF E D++T ++S +E + +V A+
Sbjct: 260 EIDEARQLFDE----SPVHDVFTWTAMVSGYIQNRMVEEARELFDRMPERNEVSWNAMLA 315
Query: 362 GY--DSDVHIGTALVDM---------------YAKCGSLKHARLAYKRISTPDLVSQNAM 404
GY V + L D+ YA+CG + A+ + ++ D VS AM
Sbjct: 316 GYVQGERVEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAM 375
Query: 405 LTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDV 464
+ Y+ GH E + F + G R + SF SALS C +++ G + +
Sbjct: 376 IAGYSQSGHSYEALRLFVLMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGY 435
Query: 465 KPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIA 522
+ ++ + + G + EA + K++ D V W ++ G HG FG+ A
Sbjct: 436 ETGCFVGNALLLMYCKCGSIEEANDLFKEMA-GKDIVSWNTMIAGYSRHG---FGEEA 489
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 16/236 (6%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGS+++A +FK M +D VSWN+++ + +G EAL E M + P+
Sbjct: 448 MYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEEALRFFESMKR-EGLKPDDA 506
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRM-QAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
+ AV+ + G ++ M Q G+ PN++ + ++ R L +E H
Sbjct: 507 TMVAVLSACSHTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGR---AGLLEEAHNL 563
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSK-FSIKNEVSCNTIIVG--YCENGNV 176
+ F + + L+ R G+ A K F+++ E S +++ Y +G
Sbjct: 564 MKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRW 623
Query: 177 AEARELFDQMEHLGVQRGI-ISW----NSMISGYVDNSLY---DEAFSMFRDLLMR 224
+ +L +M GV++ SW N + V + + DE F+ DL +R
Sbjct: 624 GDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEDLDLR 679
>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 337 bits (865), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 193/597 (32%), Positives = 324/597 (54%), Gaps = 32/597 (5%)
Query: 8 LDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIG 67
D A+KVF+ MP+RD +SWN +++ NG + A +M D +VSW+A++
Sbjct: 107 FDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKD-----VVSWNAMLS 161
Query: 68 GFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMS 127
GF QNG+ EEA + +M L N + + +L A + ++ + + M
Sbjct: 162 GFAQNGFVEEARKIFDQM----LVKNEISWNGLLSAYVQNGRIEDARRLF-----DSKMD 212
Query: 128 NPFVV-NGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQM 186
V N L+ Y R + A +F + +++++S N +I GY +NG ++EAR LF+++
Sbjct: 213 WEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEEL 272
Query: 187 EHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNS 246
R + +W +M+SG+V N + DEA +F ++ E ++ +++
Sbjct: 273 P----IRDVFAWTAMVSGFVQNGMLDEATRIFEEM-----PEKNEVSWNAMIAGYVQSQQ 323
Query: 247 LRKGKEIHALAIALGLQS-DTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKED 305
+ K +E+ + S +T V G Y + ++ A++ FDE+ + +
Sbjct: 324 IEKARELFDQMPSRNTSSWNTMVTG-----YAQCGNIDQAKILFDEMPQRDCISWAAMIS 378
Query: 306 GFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDS 365
G+ + + A+ LF +M + + LS+C+ +A +E GKQ+H ++ G+ +
Sbjct: 379 GYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQT 438
Query: 366 DVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRIL 425
G AL+ MY KCGS++ A ++ I+ D+VS N M+ YA HG GKE +A F +
Sbjct: 439 GYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESMK 498
Query: 426 ASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMVDLLSRAGEL 484
+ +PD ++ + LSAC H G + G E+F+ M Y + + KHYTCM+DLL RAG L
Sbjct: 499 MT-IKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRL 557
Query: 485 GEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLF 544
EA +K +P PD+ WGALLG HG+ E G+ AA+++ E+EP+N+G YV+L+NL+
Sbjct: 558 DEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLY 617
Query: 545 AYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
A +GRW ++ R KM+D+ + K PG SW+E +++ H F D SH +E IY ++
Sbjct: 618 AASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGDCSHPEAERIYAYLE 674
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 128/472 (27%), Positives = 211/472 (44%), Gaps = 67/472 (14%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y K G+L A+ +F MPE+D VSWN++++ A NG V EA + ++M N +S
Sbjct: 132 YVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQML-----VKNEIS 186
Query: 62 WSAVIGGFTQNGYDEEAIGML-FRMQAEGLEPN--------------ARTLSSVLPACAR 106
W+ ++ + QNG E+A + +M E + N AR+L +P
Sbjct: 187 WNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPV--- 243
Query: 107 LQKLSLGKEFHGYITRNGFMS------------NPFVVNGLVDVYRRCGDMLSALKIFSK 154
K+S GY +NG +S + F +V + + G + A +IF +
Sbjct: 244 RDKISWNIMITGY-AQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEE 302
Query: 155 FSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGV----------------------- 191
KNEVS N +I GY ++ + +ARELFDQM
Sbjct: 303 MPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILF 362
Query: 192 ----QRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSL 247
QR ISW +MISGY + +EA +F + RDG L +CA++ +L
Sbjct: 363 DEMPQRDCISWAAMISGYAQSGQSEEALHLFIK-MKRDGGILNRSALACALSSCAEIAAL 421
Query: 248 RKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGF 307
GK++H + G Q+ G AL+ MY + + A F++I + + G+
Sbjct: 422 ELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGY 481
Query: 308 EPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ-VHAYAIRCGYDSD 366
+ + A+ LF E + + + PD T+ +LSACS +++G + ++ G ++
Sbjct: 482 ARHGFGKEALALF-ESMKMTIKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITAN 540
Query: 367 VHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNAMLTAYAMHGHGKEG 417
T ++D+ + G L A K + PD + A+L A +HG + G
Sbjct: 541 AKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELG 592
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 92/414 (22%), Positives = 176/414 (42%), Gaps = 42/414 (10%)
Query: 133 NGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQ 192
N ++ Y A K+F K ++ +S N ++ GY +NGN++ AR LF+QM +
Sbjct: 95 NAMISGYLSNNKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMP----E 150
Query: 193 RGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKE 252
+ ++SWN+M+SG+ N +EA +F +L+++ I ++ +L A + +
Sbjct: 151 KDVVSWNAMLSGFAQNGFVEEARKIFDQMLVKNEI-----SWNGLLSAYVQNGRIEDARR 205
Query: 253 IHALAIALGLQS-DTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNV 311
+ + + S + +GG Y R + L A+ FD + + + + G+ N
Sbjct: 206 LFDSKMDWEIVSWNCLMGG-----YVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNG 260
Query: 312 YTWNAMQLFSEMLSLD------LTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDS 365
A +LF E+ D + G++ A M +V A+ GY
Sbjct: 261 LLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQ 320
Query: 366 DVHIGTA-----------------LVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAY 408
I A +V YA+CG++ A++ + + D +S AM++ Y
Sbjct: 321 SQQIEKARELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGY 380
Query: 409 AMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSL 468
A G +E + F ++ G + + ALS+C +++ G + + +
Sbjct: 381 AQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGY 440
Query: 469 KHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIA 522
++ + + G + EA++ + I D V W ++ G HG FG+ A
Sbjct: 441 IAGNALLAMYGKCGSIEEAFDVFEDIT-EKDIVSWNTMIAGYARHG---FGKEA 490
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 89/197 (45%), Gaps = 9/197 (4%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKCGS+++A VF+ + E+D VSWN+++ A +G EAL E M P+ V
Sbjct: 449 MYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESMKM--TIKPDDV 506
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRM-QAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
+ V+ + G ++ + M Q G+ NA+ + ++ R +L E
Sbjct: 507 TLVGVLSACSHTGLVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLD---EALNL 563
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSK-FSIKNEVSCNTIIVG--YCENGNV 176
+ F + L+ R GD K K F ++ + S +++ Y +G
Sbjct: 564 MKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRW 623
Query: 177 AEARELFDQMEHLGVQR 193
E RE+ +M GV++
Sbjct: 624 REVREMRSKMRDKGVKK 640
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/336 (19%), Positives = 139/336 (41%), Gaps = 26/336 (7%)
Query: 191 VQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKG 250
V I+ WN IS Y+ + A S+F + R ++ T+ +++ N
Sbjct: 56 VDSDIVKWNRKISAYMRKGQCESALSVFNGMRRR-----STVTYNAMISGYLSNNKFDCA 110
Query: 251 KEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPN 310
+++ D ++ Y + +L AA+ F+++ + + GF N
Sbjct: 111 RKVFEKMP----DRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQN 166
Query: 311 VYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIG 370
+ A ++F +ML + +I G +LSA +E +++ + D ++
Sbjct: 167 GFVEEARKIFDQML---VKNEISWNG-LLSAYVQNGRIEDARRLFDSKM----DWEIVSW 218
Query: 371 TALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFR 430
L+ Y + L AR + R+ D +S N M+T YA +G E RR+
Sbjct: 219 NCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEA----RRLFEELPI 274
Query: 431 PDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEF 490
D ++ + +S V G + + F+ M + + + M+ ++ ++ +A E
Sbjct: 275 RDVFAWTAMVSGFVQNGMLDEATRIFEEMP----EKNEVSWNAMIAGYVQSQQIEKAREL 330
Query: 491 IKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRL 526
++P + ++ W ++ G GN++ +I D +
Sbjct: 331 FDQMP-SRNTSSWNTMVTGYAQCGNIDQAKILFDEM 365
>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 337 bits (865), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 193/597 (32%), Positives = 324/597 (54%), Gaps = 32/597 (5%)
Query: 8 LDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIG 67
D A+KVF+ MP+RD +SWN +++ NG + A +M D +VSW+A++
Sbjct: 107 FDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKD-----VVSWNAMLS 161
Query: 68 GFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMS 127
GF QNG+ EEA + +M L N + + +L A + ++ + + M
Sbjct: 162 GFAQNGFVEEARKIFDQM----LVKNEISWNGLLSAYVQNGRIEDARRLF-----DSKMD 212
Query: 128 NPFVV-NGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQM 186
V N L+ Y R + A +F + +++++S N +I GY +NG ++EAR LF+++
Sbjct: 213 WEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEEL 272
Query: 187 EHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNS 246
R + +W +M+SG+V N + DEA +F ++ E ++ +++
Sbjct: 273 P----IRDVFAWTAMVSGFVQNGMLDEATRIFEEM-----PEKNEVSWNAMIAGYVQSQQ 323
Query: 247 LRKGKEIHALAIALGLQS-DTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKED 305
+ K +E+ + S +T V G Y + ++ A++ FDE+ + +
Sbjct: 324 IEKARELFDQMPSRNTSSWNTMVTG-----YAQCGNIDQAKILFDEMPQRDCISWAAMIS 378
Query: 306 GFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDS 365
G+ + + A+ LF +M + + LS+C+ +A +E GKQ+H ++ G+ +
Sbjct: 379 GYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQT 438
Query: 366 DVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRIL 425
G AL+ MY KCGS++ A ++ I+ D+VS N M+ YA HG GKE +A F +
Sbjct: 439 GYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESMK 498
Query: 426 ASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMVDLLSRAGEL 484
+ +PD ++ + LSAC H G + G E+F+ M Y + + KHYTCM+DLL RAG L
Sbjct: 499 MT-IKPDDVTLVGVLSACSHTGFVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRL 557
Query: 485 GEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLF 544
EA +K +P PD+ WGALLG HG+ E G+ AA+++ E+EP+N+G YV+L+NL+
Sbjct: 558 DEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLY 617
Query: 545 AYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
A +GRW ++ R KM+D+ + K PG SW+E +++ H F D SH +E IY ++
Sbjct: 618 AASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGDCSHPEAERIYAYLE 674
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 128/472 (27%), Positives = 211/472 (44%), Gaps = 67/472 (14%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y K G+L A+ +F MPE+D VSWN++++ A NG V EA + ++M N +S
Sbjct: 132 YVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQML-----VKNEIS 186
Query: 62 WSAVIGGFTQNGYDEEAIGML-FRMQAEGLEPN--------------ARTLSSVLPACAR 106
W+ ++ + QNG E+A + +M E + N AR+L +P
Sbjct: 187 WNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPV--- 243
Query: 107 LQKLSLGKEFHGYITRNGFMS------------NPFVVNGLVDVYRRCGDMLSALKIFSK 154
K+S GY +NG +S + F +V + + G + A +IF +
Sbjct: 244 RDKISWNIMITGY-AQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEE 302
Query: 155 FSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGV----------------------- 191
KNEVS N +I GY ++ + +ARELFDQM
Sbjct: 303 MPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILF 362
Query: 192 ----QRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSL 247
QR ISW +MISGY + +EA +F + RDG L +CA++ +L
Sbjct: 363 DEMPQRDCISWAAMISGYAQSGQSEEALHLFIK-MKRDGGILNRSALACALSSCAEIAAL 421
Query: 248 RKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGF 307
GK++H + G Q+ G AL+ MY + + A F++I + + G+
Sbjct: 422 ELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGY 481
Query: 308 EPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ-VHAYAIRCGYDSD 366
+ + A+ LF E + + + PD T+ +LSACS +++G + ++ G ++
Sbjct: 482 ARHGFGKEALALF-ESMKMTIKPDDVTLVGVLSACSHTGFVDKGMEYFNSMYQNYGITAN 540
Query: 367 VHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNAMLTAYAMHGHGKEG 417
T ++D+ + G L A K + PD + A+L A +HG + G
Sbjct: 541 AKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELG 592
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/414 (22%), Positives = 176/414 (42%), Gaps = 42/414 (10%)
Query: 133 NGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQ 192
N ++ Y A K+F K ++ +S N ++ GY +NGN++ AR LF+QM +
Sbjct: 95 NAMISGYLSNNKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMP----E 150
Query: 193 RGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKE 252
+ ++SWN+M+SG+ N +EA +F +L+++ I ++ +L A + +
Sbjct: 151 KDVVSWNAMLSGFAQNGFVEEARKIFDQMLVKNEI-----SWNGLLSAYVQNGRIEDARR 205
Query: 253 IHALAIALGLQS-DTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNV 311
+ + + S + +GG Y R + L A+ FD + + + + G+ N
Sbjct: 206 LFDSKMDWEIVSWNCLMGG-----YVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNG 260
Query: 312 YTWNAMQLFSEMLSLD------LTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDS 365
A +LF E+ D + G++ A M +V A+ GY
Sbjct: 261 LLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQ 320
Query: 366 DVHIGTA-----------------LVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAY 408
I A +V YA+CG++ A++ + + D +S AM++ Y
Sbjct: 321 SQQIEKARELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGY 380
Query: 409 AMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSL 468
A G +E + F ++ G + + ALS+C +++ G + + +
Sbjct: 381 AQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGY 440
Query: 469 KHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIA 522
++ + + G + EA++ + I D V W ++ G HG FG+ A
Sbjct: 441 IAGNALLAMYGKCGSIEEAFDVFEDIT-EKDIVSWNTMIAGYARHG---FGKEA 490
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 90/197 (45%), Gaps = 9/197 (4%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKCGS+++A VF+ + E+D VSWN+++ A +G EAL E M P+ V
Sbjct: 449 MYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESMKM--TIKPDDV 506
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRM-QAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
+ V+ + G+ ++ + M Q G+ NA+ + ++ R +L E
Sbjct: 507 TLVGVLSACSHTGFVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLD---EALNL 563
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSK-FSIKNEVSCNTIIVG--YCENGNV 176
+ F + L+ R GD K K F ++ + S +++ Y +G
Sbjct: 564 MKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRW 623
Query: 177 AEARELFDQMEHLGVQR 193
E RE+ +M GV++
Sbjct: 624 REVREMRSKMRDKGVKK 640
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/336 (19%), Positives = 139/336 (41%), Gaps = 26/336 (7%)
Query: 191 VQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKG 250
V I+ WN IS Y+ + A S+F + R ++ T+ +++ N
Sbjct: 56 VDSDIVKWNRKISAYMRKGQCESALSVFNGMRRR-----STVTYNAMISGYLSNNKFDCA 110
Query: 251 KEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPN 310
+++ D ++ Y + +L AA+ F+++ + + GF N
Sbjct: 111 RKVFEKMP----DRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQN 166
Query: 311 VYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIG 370
+ A ++F +ML + +I G +LSA +E +++ + D ++
Sbjct: 167 GFVEEARKIFDQML---VKNEISWNG-LLSAYVQNGRIEDARRLFDSKM----DWEIVSW 218
Query: 371 TALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFR 430
L+ Y + L AR + R+ D +S N M+T YA +G E RR+
Sbjct: 219 NCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEA----RRLFEELPI 274
Query: 431 PDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEF 490
D ++ + +S V G + + F+ M + + + M+ ++ ++ +A E
Sbjct: 275 RDVFAWTAMVSGFVQNGMLDEATRIFEEMP----EKNEVSWNAMIAGYVQSQQIEKAREL 330
Query: 491 IKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRL 526
++P + ++ W ++ G GN++ +I D +
Sbjct: 331 FDQMP-SRNTSSWNTMVTGYAQCGNIDQAKILFDEM 365
>gi|242076494|ref|XP_002448183.1| hypothetical protein SORBIDRAFT_06g022570 [Sorghum bicolor]
gi|241939366|gb|EES12511.1| hypothetical protein SORBIDRAFT_06g022570 [Sorghum bicolor]
Length = 549
Score = 337 bits (865), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 179/546 (32%), Positives = 298/546 (54%), Gaps = 20/546 (3%)
Query: 57 PNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNA--RTLSSVLPACARLQKLSLGK 114
P +SW+ I G+ +AI + RM+A ++ +L + L +CA L +LG
Sbjct: 12 PPPLSWAHQIRMAAAQGHFRDAISLFLRMRACAAPRSSVPASLPAALKSCAALGLSALGA 71
Query: 115 EFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
H R+G ++ F N L+++Y K+ + V T + G +
Sbjct: 72 SLHALAIRSGAFADRFTANALLNLY---------CKLPCSYLHSTGV---TSVGGTGSST 119
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTF 234
+ R++FD+M ++R ++SWN+++ G + + EA + R + R+G P SFT
Sbjct: 120 ALESVRKVFDEM----IERDVVSWNTLVLGCAEEGRHHEALVLVRKM-WREGFRPDSFTL 174
Query: 235 GSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIEN 294
SVL A+ +++G E+H A+ G +D FVG +L++MY + FD +
Sbjct: 175 SSVLPIFAECADVKRGSEVHGFAVRNGFDNDVFVGSSLIDMYANCTRTDYSVKVFDNLPV 234
Query: 295 IENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV 354
+ +L G N A+ +F ML + P T ++ C +LA++ GKQ+
Sbjct: 235 RDPILWNSVLAGCAQNGSVEEALGIFRRMLQTGVRPVPVTFSSLIPVCGNLASLRFGKQL 294
Query: 355 HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHG 414
HAY IR G++ +V I ++L+DMY KCG + A + R+ +PD+VS AM+ YA+HG
Sbjct: 295 HAYVIRGGFEDNVFISSSLIDMYCKCGEISIAHHIFDRMCSPDVVSWTAMIMGYALHGPA 354
Query: 415 KEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTC 473
+E + F R+ +P+HI+FL+ L+AC HAG + G ++F M+ +Y + P+L+H
Sbjct: 355 REALVLFERMELGNAKPNHITFLAVLTACSHAGLVDKGWKYFKSMSDHYGIVPTLEHCAA 414
Query: 474 MVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNN 533
+ D+L RAGEL EAY FI K+ + P + +W LL C H N + A +++ELEP +
Sbjct: 415 LADILGRAGELDEAYNFISKMQIKPTASVWSTLLRACRVHKNTMLAEEVAKKIMELEPRS 474
Query: 534 TGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRS 593
G++V+L+N+++ +GRW++ A R+ M+ + M K P CSWIE ++++H F A DRSH
Sbjct: 475 IGSHVVLSNMYSASGRWNEAAHLRKSMRKKGMKKDPACSWIEVKNKLHVFVAHDRSHPCC 534
Query: 594 EEIYTI 599
E T+
Sbjct: 535 IECSTL 540
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 100/385 (25%), Positives = 168/385 (43%), Gaps = 73/385 (18%)
Query: 3 GKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSW 62
G +L+ +KVF M ERD VSWN++V CA
Sbjct: 116 GSSTALESVRKVFDEMIERDVVSWNTLVLGCA---------------------------- 147
Query: 63 SAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITR 122
+ G EA+ ++ +M EG P++ TLSSVLP A + G E HG+ R
Sbjct: 148 --------EEGRHHEALVLVRKMWREGFRPDSFTLSSVLPIFAECADVKRGSEVHGFAVR 199
Query: 123 NGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAREL 182
NGF ++ FV + L+D+Y C ++K+F +++ + N+++ G +NG+V EA +
Sbjct: 200 NGFDNDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDPILWNSVLAGCAQNGSVEEALGI 259
Query: 183 FDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACA 242
F +M GV+ P TF S++ C
Sbjct: 260 FRRMLQTGVR------------------------------------PVPVTFSSLIPVCG 283
Query: 243 DMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKM 302
++ SLR GK++HA I G + + F+ +L++MYC+ ++ A FD + + + +
Sbjct: 284 NLASLRFGKQLHAYVIRGGFEDNVFISSSLIDMYCKCGEISIAHHIFDRMCSPDVVSWTA 343
Query: 303 KEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG-KQVHAYAIRC 361
G+ + A+ LF M + P+ T +L+ACS +++G K + +
Sbjct: 344 MIMGYALHGPAREALVLFERMELGNAKPNHITFLAVLTACSHAGLVDKGWKYFKSMSDHY 403
Query: 362 GYDSDVHIGTALVDMYAKCGSLKHA 386
G + AL D+ + G L A
Sbjct: 404 GIVPTLEHCAALADILGRAGELDEA 428
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 106/230 (46%), Gaps = 36/230 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY C D + KVF +P RD + WNSV+ CA NG V EAL
Sbjct: 215 MYANCTRTDYSVKVFDNLPVRDPILWNSVLAGCAQNGSVEEAL----------------- 257
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
G+ RM G+ P T SS++P C L L GK+ H Y+
Sbjct: 258 -------------------GIFRRMLQTGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYV 298
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R GF N F+ + L+D+Y +CG++ A IF + + VS +I+GY +G EA
Sbjct: 299 IRGGFEDNVFISSSLIDMYCKCGEISIAHHIFDRMCSPDVVSWTAMIMGYALHGPAREAL 358
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPT 230
LF++ME + I++ ++++ L D+ + F+ + GI PT
Sbjct: 359 VLFERMELGNAKPNHITFLAVLTACSHAGLVDKGWKYFKSMSDHYGIVPT 408
>gi|222637368|gb|EEE67500.1| hypothetical protein OsJ_24934 [Oryza sativa Japonica Group]
Length = 830
Score = 337 bits (865), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 195/626 (31%), Positives = 333/626 (53%), Gaps = 52/626 (8%)
Query: 19 PERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEA 78
P R S+V A AA G + +A + + +T V +A++ F + A
Sbjct: 88 PTRAPSPATSLVAAQAAAGRLRDAAAFFDAVPPARRDT---VLHNAMMSAFARASLAAPA 144
Query: 79 IGMLFRMQAEG-LEPNARTLSSVLPACARLQKLSLG--KEFHGYITRNGFMSNPFVVNGL 135
+ + + G L P+ + ++++ A ++ L+ + H + ++G + V N L
Sbjct: 145 VSVFHALLGSGSLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNAL 204
Query: 136 VDVYRRCGD---MLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQ 192
+ +Y +C A K+ + K++++ T++VGY G+V AR +F++++
Sbjct: 205 IALYMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVD----G 260
Query: 193 RGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKE 252
+ + WN+MISGYV + + +AF +FR ++ + + FTF SVL ACA+ GK
Sbjct: 261 KFDVVWNAMISGYVQSGMCADAFELFRRMV-SEKVPLDEFTFTSVLSACANAGFFVHGKS 319
Query: 253 IHALAIALGL----QSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG-------- 300
+H I L ++ V ALV +Y + +V A+ FD + N+++++
Sbjct: 320 VHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTM-NLKDVVSWNTILSGY 378
Query: 301 ----------------KMKED--------GFEPNVYTWNAMQLFSEMLSLDLTPDIYTVG 336
K D G+ + +A++LF++M + D+ P YT
Sbjct: 379 IDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYA 438
Query: 337 IILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTP 396
++AC L ++ G+Q+HA+ ++CG+++ G AL+ MYAKCG++ ARL + +
Sbjct: 439 GAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNL 498
Query: 397 DLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFF 456
D VS NAM++A HGHG+E + F +++A G PD ISFL+ L+AC HAG + G +F
Sbjct: 499 DSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYF 558
Query: 457 DLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
+ M + + P HY ++DLL R+G +GEA + IK +P P +W A+L GC ++G+
Sbjct: 559 ESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGD 618
Query: 516 LEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIE 575
+EFG AAD+L + P + G Y++L+N ++ AGRW D AR R+ M+DR + K PGCSWIE
Sbjct: 619 MEFGAYAADQLFRMIPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIE 678
Query: 576 DRDEIHKFRASDRSHDRSEEIYTIID 601
+IH F D H ++E+Y ++
Sbjct: 679 VGSKIHVFLVGDTKHPEAQEVYQFLE 704
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 110/399 (27%), Positives = 198/399 (49%), Gaps = 26/399 (6%)
Query: 1 MYGKCGSLD---DAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETP 57
+Y KC + + DA+KV MP++D ++W ++V G V A E + +
Sbjct: 207 LYMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFD--- 263
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
V W+A+I G+ Q+G +A + RM +E + + T +SVL ACA GK H
Sbjct: 264 --VVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVH 321
Query: 118 GYITR--NGFMSNPF--VVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCEN 173
G I R F+ V N LV +Y + G ++ A +IF ++K+ VS NTI+ GY ++
Sbjct: 322 GQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDS 381
Query: 174 GNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFT 233
G + +A E+F M + + +SW M+SGYV L ++A +F + D ++P +T
Sbjct: 382 GCLDKAVEVFKVMPY----KNDLSWMVMVSGYVHGGLSEDALKLFNQMRAED-VKPCDYT 436
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
+ + AC ++ +L+ G+++HA + G ++ G AL+ MY + + A++ F +
Sbjct: 437 YAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMP 496
Query: 294 NIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG-- 351
N++++ + + A++LF +M++ + PD + IL+AC+ ++ G
Sbjct: 497 NLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFH 556
Query: 352 ---KQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHAR 387
+ I G D L+D+ + G + AR
Sbjct: 557 YFESMKRDFGISPGEDHYAR----LIDLLGRSGRIGEAR 591
>gi|357167614|ref|XP_003581249.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300-like
[Brachypodium distachyon]
Length = 1430
Score = 337 bits (865), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 202/642 (31%), Positives = 322/642 (50%), Gaps = 88/642 (13%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y + G L DA++VF +P + S+N++++A A G +A + P+ S
Sbjct: 805 YARLGRLPDARRVFDEIPHPNTFSYNALLSAHARLGRPADARALFHAIPD-----PDQCS 859
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
++AVI Q+ +A+ L M A+ NA + +S L ACA + G + H ++
Sbjct: 860 YNAVIAALAQHSRGADALLFLAAMHADDFVLNAYSFASALSACAAEKDSRTGVQVHALVS 919
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
++ + ++ + L+D+Y +C A ++F +N VS N++I Y +NG V EA
Sbjct: 920 KSPHAKDVYIGSALLDMYAKCEWPEEARRVFEAMPERNIVSWNSLITCYEQNGPVGEALV 979
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
LF M M+ G P T SV+ AC
Sbjct: 980 LFVSM------------------------------------MKAGFVPDEVTLASVMSAC 1003
Query: 242 ADMNSLRKGKEIHALAIALG-LQSDTFVGGALVEMYCRYQDLVAAQMAFDE--------- 291
A + + R+G+++HA + + D + ALV+MY + AA+ FD
Sbjct: 1004 AGLAADREGRQVHARVVKSDRFREDMVLSNALVDMYAKCGRTRAARCVFDRMASRSVVSE 1063
Query: 292 ------------IENIENLLGKMKEDGFEPNVYTWN--------------AMQLFSEMLS 325
+E+ + + +M E NV WN A++LF +
Sbjct: 1064 TSLITGYARSANVEDAQMVFSQM----VEKNVIAWNVLIAAYAQNGEEEEALRLFVRLKR 1119
Query: 326 LDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGY------DSDVHIGTALVDMYAK 379
+ P YT G +L+AC ++A ++ G+Q H + ++ G+ +SDV +G +LVDMY K
Sbjct: 1120 ESVWPTHYTYGNVLNACGNVADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLK 1179
Query: 380 CGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSA 439
GS+ ++R++ D VS NAM+ +A +G K+ + F R+L S PD ++ +
Sbjct: 1180 TGSIDDGAKVFERMAARDNVSWNAMIVGHAQNGRAKDALHLFERMLCSKESPDSVTMIGV 1239
Query: 440 LSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAP 498
LSAC H+G ++ G +F M + + PS HYTCM+DLL RAG L E E IK++ M P
Sbjct: 1240 LSACGHSGLVEEGRRYFRSMTEDHGIIPSQDHYTCMIDLLGRAGHLKEVEELIKEMSMEP 1299
Query: 499 DSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQ 558
D+V+W +LLG C H N+E G+ AA +L EL+P N+G YV+L+N++A G+W+D+ R R
Sbjct: 1300 DAVLWASLLGSCRLHKNVEMGEWAAGKLFELDPRNSGPYVLLSNMYAELGKWADVFRVRS 1359
Query: 559 KMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTII 600
MK R + K PGCSWIE ++ F A D H EI+ I+
Sbjct: 1360 SMKHRGVSKQPGCSWIEIGRKVSVFLARDNGHPCKNEIHAIL 1401
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 148/496 (29%), Positives = 263/496 (53%), Gaps = 32/496 (6%)
Query: 57 PNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEF 116
PN +SW+ ++ + G + A+ M FRM + G+ P T+S + AC L G+
Sbjct: 215 PNAISWNVIVRRYHLAGMGDMAVDMFFRMLSAGVRPLGYTVSHAVLACRDNNALEEGRCI 274
Query: 117 HGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNV 176
H ++ R+G+ + V + +VD+Y +CG M +A +F+ +K+ V +I+ G G +
Sbjct: 275 HAFVLRHGYEHHVHVRSSVVDMYAKCGAMDAAQSLFNLAPMKDMVMSTSIVSGLASCGRI 334
Query: 177 AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGS 236
A+A+ +F+ M+ +R ++SWN+M++GY+ + A +F+ + ++ E + T GS
Sbjct: 335 ADAKRVFEGMK----ERNLVSWNAMLTGYIRSMDLTGALLLFQQM-RQETREFDAITLGS 389
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
VL AC + + KG+E+HA AI G S + ALV MY + L +A E
Sbjct: 390 VLSACTGILDIGKGEEVHAFAIKCGFFSSPILKNALVRMYSKCGCLRSA----------E 439
Query: 297 NLLGKMKEDGFEPNVYTWN--------------AMQLFSEMLSLDLTPDIYTVGIILSAC 342
LL + E G E + Y+WN A+ ++M S ++TP+ T L+AC
Sbjct: 440 RLL--LFEMGSERDSYSWNSLISGYERHSMSEAALYALTKMQS-EVTPNQSTFSSALAAC 496
Query: 343 SSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQN 402
+++ +++G Q+HAY IR GY+ D + + L+DMY KC ++ ++ + D++ N
Sbjct: 497 ANIFLLKQGMQIHAYMIRKGYEIDDILRSVLIDMYCKCRQFDYSIRIFEARPSRDVILWN 556
Query: 403 AMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYY 462
+M+ A G G+ G+ F + G + D ++FL AL +C+ G ++ G +F LM
Sbjct: 557 SMIFGCAYSGKGEYGLDLFDEMQKQGIKADSVTFLGALVSCISEGHVRLGRSYFTLMMDE 616
Query: 463 DVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIA 522
+ P ++HY CM++LL + G + E +F++ +P P + MW + C +GN + G+ A
Sbjct: 617 SIIPRIEHYECMIELLGKHGCMVELEDFVEHMPFEPTTAMWLRIFDCCREYGNRKLGERA 676
Query: 523 ADRLIELEPNNTGNYV 538
A + + P +V
Sbjct: 677 AKCINDSNPLTPVQFV 692
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 147/555 (26%), Positives = 241/555 (43%), Gaps = 121/555 (21%)
Query: 5 CGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSA 64
CGS+ DA+++F +MP RD SWN+++TA + G EAL M+SL
Sbjct: 98 CGSVADARELFDLMPLRDGGSWNAIITASSRAGHPSEALSLFSNMNSL------------ 145
Query: 65 VIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNG 124
G+ P T++SVL CA L ++ HG+I +
Sbjct: 146 ------------------------GIRPKDATMASVLSCCAECLDLCGARQLHGHIAKRD 181
Query: 125 FMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFD 184
F SN + LVDVY C + A + F N +S N I+ Y
Sbjct: 182 FQSNVILGTALVDVYGNCFLLADARRAFDDILEPNAISWNVIVRRY-------------- 227
Query: 185 QMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADM 244
HL + D A MF +L G+ P +T ++AC D
Sbjct: 228 ---HLA------------------GMGDMAVDMFFRML-SAGVRPLGYTVSHAVLACRDN 265
Query: 245 NSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFD-------------- 290
N+L +G+ IHA + G + V ++V+MY + + AAQ F+
Sbjct: 266 NALEEGRCIHAFVLRHGYEHHVHVRSSVVDMYAKCGAMDAAQSLFNLAPMKDMVMSTSIV 325
Query: 291 -------EIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTP------------- 330
I + + + MKE N+ +WNAM L + S+DLT
Sbjct: 326 SGLASCGRIADAKRVFEGMKER----NLVSWNAM-LTGYIRSMDLTGALLLFQQMRQETR 380
Query: 331 --DIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHAR- 387
D T+G +LSAC+ + + +G++VHA+AI+CG+ S + ALV MY+KCG L+ A
Sbjct: 381 EFDAITLGSVLSACTGILDIGKGEEVHAFAIKCGFFSSPILKNALVRMYSKCGCLRSAER 440
Query: 388 -LAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHA 446
L ++ S D S N++++ Y H + + + + S P+ +F SAL+AC +
Sbjct: 441 LLLFEMGSERDSYSWNSLISGYERHSMSEAALYALTK-MQSEVTPNQSTFSSALAACANI 499
Query: 447 GSIKTGSEFFDLMAY--YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWG 504
+K G + M Y++ L+ + ++D+ + + + + P + D ++W
Sbjct: 500 FLLKQGMQIHAYMIRKGYEIDDILR--SVLIDMYCKCRQFDYSIRIFEARP-SRDVILWN 556
Query: 505 ALLGGCVSHGNLEFG 519
+++ GC G E+G
Sbjct: 557 SMIFGCAYSGKGEYG 571
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 123/426 (28%), Positives = 205/426 (48%), Gaps = 50/426 (11%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC ++A++VF+ MPER+ VSWNS++T C E
Sbjct: 936 MYAKCEWPEEARRVFEAMPERNIVSWNSLIT-------------CYE------------- 969
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
QNG EA+ + M G P+ TL+SV+ ACA L G++ H +
Sbjct: 970 ----------QNGPVGEALVLFVSMMKAGFVPDEVTLASVMSACAGLAADREGRQVHARV 1019
Query: 121 TRNG-FMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
++ F + + N LVD+Y +CG +A +F + + ++ VS ++I GY + NV +A
Sbjct: 1020 VKSDRFREDMVLSNALVDMYAKCGRTRAARCVFDRMASRSVVSETSLITGYARSANVEDA 1079
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
+ +F QM V++ +I+WN +I+ Y N +EA +F L R+ + PT +T+G+VL
Sbjct: 1080 QMVFSQM----VEKNVIAWNVLIAAYAQNGEEEEALRLFVR-LKRESVWPTHYTYGNVLN 1134
Query: 240 ACADMNSLRKGKEIHALAIA------LGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
AC ++ L+ G++ H + G +SD FVG +LV+MY + + F+ +
Sbjct: 1135 ACGNVADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMA 1194
Query: 294 NIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ 353
+N+ G N +A+ LF ML +PD T+ +LSAC +E G++
Sbjct: 1195 ARDNVSWNAMIVGHAQNGRAKDALHLFERMLCSKESPDSVTMIGVLSACGHSGLVEEGRR 1254
Query: 354 -VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST-PDLVSQNAMLTAYAMH 411
+ G T ++D+ + G LK K +S PD V ++L + +H
Sbjct: 1255 YFRSMTEDHGIIPSQDHYTCMIDLLGRAGHLKEVEELIKEMSMEPDAVLWASLLGSCRLH 1314
Query: 412 GHGKEG 417
+ + G
Sbjct: 1315 KNVEMG 1320
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 107/431 (24%), Positives = 194/431 (45%), Gaps = 44/431 (10%)
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
++ F++ F++N LV Y R G + A ++F + N S N ++ + G A+AR
Sbjct: 788 KSPFVAETFLLNTLVSAYARLGRLPDARRVFDEIPHPNTFSYNALLSAHARLGRPADARA 847
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
LF H S+N++I+ +S +A +F + D +++F S L AC
Sbjct: 848 LF----HAIPDPDQCSYNAVIAALAQHSRGADAL-LFLAAMHADDFVLNAYSFASALSAC 902
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK 301
A R G ++HAL D ++G AL++MY + + A+ F+ + +
Sbjct: 903 AAEKDSRTGVQVHALVSKSPHAKDVYIGSALLDMYAKCEWPEEARRVFEAMPERNIVSWN 962
Query: 302 MKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRC 361
+E N A+ LF M+ PD T+ ++SAC+ LA G+QVHA ++
Sbjct: 963 SLITCYEQNGPVGEALVLFVSMMKAGFVPDEVTLASVMSACAGLAADREGRQVHARVVKS 1022
Query: 362 G-YDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLT-------------- 406
+ D+ + ALVDMYAKCG + AR + R+++ +VS+ +++T
Sbjct: 1023 DRFREDMVLSNALVDMYAKCGRTRAARCVFDRMASRSVVSETSLITGYARSANVEDAQMV 1082
Query: 407 -----------------AYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSI 449
AYA +G +E + F R+ P H ++ + L+AC + +
Sbjct: 1083 FSQMVEKNVIAWNVLIAAYAQNGEEEEALRLFVRLKRESVWPTHYTYGNVLNACGNVADL 1142
Query: 450 KTGSE----FFDLMAYYDVKPSLKHYT--CMVDLLSRAGELGEAYEFIKKIPMAPDSVMW 503
+ G + +D P + +VD+ + G + + + +++ A D+V W
Sbjct: 1143 QLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMA-ARDNVSW 1201
Query: 504 GALLGGCVSHG 514
A++ G +G
Sbjct: 1202 NAMIVGHAQNG 1212
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 100/352 (28%), Positives = 166/352 (47%), Gaps = 40/352 (11%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG++D A+ +F + P +D V S+V+ A+ G + +A E M + NLV
Sbjct: 296 MYAKCGAMDAAQSLFNLAPMKDMVMSTSIVSGLASCGRIADAKRVFEGM-----KERNLV 350
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A++ G+ ++ A+ + +M+ E E +A TL SVL AC + + G+E H +
Sbjct: 351 SWNAMLTGYIRSMDLTGALLLFQQMRQETREFDAITLGSVLSACTGILDIGKGEEVHAFA 410
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ GF S+P + N LV +Y +CG + SA ++
Sbjct: 411 IKCGFFSSPILKNALVRMYSKCGCLRSAERLL---------------------------- 442
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LF+ +G +R SWNS+ISGY +S+ + A M+ + P TF S L A
Sbjct: 443 -LFE----MGSERDSYSWNSLISGYERHSMSEAALYALTK--MQSEVTPNQSTFSSALAA 495
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA++ L++G +IHA I G + D + L++MYC+ + + F+ + + +L
Sbjct: 496 CANIFLLKQGMQIHAYMIRKGYEIDDILRSVLIDMYCKCRQFDYSIRIFEARPSRDVILW 555
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGK 352
G + + LF EM + D T L +C S + G+
Sbjct: 556 NSMIFGCAYSGKGEYGLDLFDEMQKQGIKADSVTFLGALVSCISEGHVRLGR 607
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 70/180 (38%), Gaps = 32/180 (17%)
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAY---------- 408
++ + ++ + LV YA+ G L AR + I P+ S NA+L+A+
Sbjct: 787 LKSPFVAETFLLNTLVSAYARLGRLPDARRVFDEIPHPNTFSYNALLSAHARLGRPADAR 846
Query: 409 ---------------------AMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAG 447
A H G + + + A F + SF SALSAC
Sbjct: 847 ALFHAIPDPDQCSYNAVIAALAQHSRGADALLFLAAMHADDFVLNAYSFASALSACAAEK 906
Query: 448 SIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALL 507
+TG + L++ + + ++D+ ++ EA + +P + V W +L+
Sbjct: 907 DSRTGVQVHALVSKSPHAKDVYIGSALLDMYAKCEWPEEARRVFEAMP-ERNIVSWNSLI 965
>gi|347954528|gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
Length = 666
Score = 337 bits (865), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 187/547 (34%), Positives = 301/547 (55%), Gaps = 10/547 (1%)
Query: 55 ETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGK 114
+ PNL+ W+ + G + A+ + M + GL PN+ T +L +CA+ + G+
Sbjct: 52 QEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQ 111
Query: 115 EFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
+ HG++ + G + +V L+ +Y + G + A K+F + ++ VS +I GY G
Sbjct: 112 QIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRG 171
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTF 234
+ A+++FD++ + ++SWN+MISGY + Y EA +F+D+ M+ + P T
Sbjct: 172 YIENAQKMFDEIP----VKDVVSWNAMISGYAETGNYKEALELFKDM-MKTNVRPDESTM 226
Query: 235 GSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIEN 294
+V+ ACA S+ G+++H+ G S+ + AL+++Y + +L A F+ +
Sbjct: 227 VTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPY 286
Query: 295 IENLLGKMKEDGF-EPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ 353
+ + G+ N+Y A+ LF EML TP+ T+ IL AC+ L ++ G+
Sbjct: 287 KDVISWNTLIGGYTHMNLYK-EALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRW 345
Query: 354 VHAYAIR--CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMH 411
+H Y + G + + T+L+DMYAKCG ++ A + I L S NAM+ +AMH
Sbjct: 346 IHVYIDKRLKGVANASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMH 405
Query: 412 GHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKH 470
G F R+ +G PD I+F+ LSAC H+G + G F M Y + P L+H
Sbjct: 406 GRADASFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEH 465
Query: 471 YTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELE 530
Y CM+DLL +G EA E I + M PD V+W +LL C HGN+E G+ A LI++E
Sbjct: 466 YGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELGESFAQNLIKIE 525
Query: 531 PNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSH 590
P N G+YV+L+N++A AGRW+++A TR + D+ M K PGCS IE +H+F D+ H
Sbjct: 526 PENPGSYVLLSNIYATAGRWNEVANTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFH 585
Query: 591 DRSEEIY 597
R+ EIY
Sbjct: 586 PRNREIY 592
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 118/439 (26%), Positives = 200/439 (45%), Gaps = 81/439 (18%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY + G L+DA KVF P RD VS+ +++ A+ G + A + + + D +V
Sbjct: 135 MYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQKMFDEIPVKD-----VV 189
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A+I G+ + G +EA+ + M + P+ T+ +V+ ACA+ + LG++ H +I
Sbjct: 190 SWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHSWI 249
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+GF SN +VN L+D+Y +CG++ +A +F K+ +S NT+I GY
Sbjct: 250 DDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLIGGYT--------- 300
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
H+ +LY EA +F+++L R G P T S+L A
Sbjct: 301 -------HM-------------------NLYKEALLLFQEML-RSGETPNDVTMLSILPA 333
Query: 241 CADMNSLRKGKEIHALAIAL--GLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
CA + ++ G+ IH G+ + + + +L++MY + D+ AA F+ I
Sbjct: 334 CAHLGAIDIGRWIHVYIDKRLKGVANASSLRTSLIDMYAKCGDIEAAHQVFNSI------ 387
Query: 299 LGKMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSS 344
++ +WNAM +FS M + PD T +LSACS
Sbjct: 388 --------LHKSLSSWNAMIFGFAMHGRADASFDIFSRMRKNGIEPDDITFVGLLSACSH 439
Query: 345 LATMERGKQV-----HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST-PDL 398
++ G+ + Y + + H G ++D+ G K A + PD
Sbjct: 440 SGMLDLGRHIFRSMTQDYKMTPKLE---HYG-CMIDLLGHSGLFKEAEEMINTMEMEPDG 495
Query: 399 VSQNAMLTAYAMHGHGKEG 417
V ++L A MHG+ + G
Sbjct: 496 VIWCSLLKACKMHGNVELG 514
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 36/178 (20%), Positives = 77/178 (43%), Gaps = 4/178 (2%)
Query: 352 KQVHAYAIRCGYDSDVHIGTALVD---MYAKCGSLKHARLAYKRISTPDLVSQNAMLTAY 408
+ +HA I+ G + + + L++ + L +A ++ I P+L+ N M +
Sbjct: 7 RMIHAQMIKTGLHNTNYALSKLIEFCILSPHFDGLPYAISVFETIQEPNLLIWNTMFRGH 66
Query: 409 AMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSL 468
A+ + + +++ G P+ +F L +C + + K G + + L
Sbjct: 67 ALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGCDLDL 126
Query: 469 KHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRL 526
+T ++ + + G L +A++ + P D V + AL+ G S G +E Q D +
Sbjct: 127 YVHTSLISMYVQNGRLEDAHKVFDESPHR-DVVSYTALIKGYASRGYIENAQKMFDEI 183
>gi|225445374|ref|XP_002281645.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Vitis vinifera]
Length = 858
Score = 337 bits (865), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 203/671 (30%), Positives = 331/671 (49%), Gaps = 143/671 (21%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKCG L+DA+KVF M E+ N+V
Sbjct: 226 MYGKCGVLEDARKVFDSMVEK------------------------------------NVV 249
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+++I G+ QNG ++EAI + + M+ EG+EP T++S L A A L L GK+ H
Sbjct: 250 TWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVASFLSASANLDALIEGKQGH--- 306
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
A+ I + + N + ++II Y + G + +A
Sbjct: 307 ---------------------------AIAILNSLDLDN-ILGSSIINFYSKVGLIEDAE 338
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+F +M +++ +++WN +IS YV + +A +M L+ + + S T S+L A
Sbjct: 339 LVFSRM----LEKDVVTWNLLISSYVQHHQVGKALNMCH-LMRSENLRFDSVTLSSILSA 393
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCR---------------------Y 279
A ++++ GKE H I L+SD V ++++MY + +
Sbjct: 394 SAVTSNIKLGKEGHCYCIRRNLESDVVVANSIIDMYAKCERIDDARKVFDSTTERDLVLW 453
Query: 280 QDLVAA---------------QMAFD--------------------EIENIENLLGKMKE 304
L+AA QM FD ++ +++ +M+
Sbjct: 454 NTLLAAYAQVGLSGEALKLFYQMQFDSVPPNVISWNSVILGFLRNGQVNEAKDMFSQMQS 513
Query: 305 DGFEPNVYTWN--------------AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMER 350
GF+PN+ TW A+ F +M + P I ++ +L AC+ + ++
Sbjct: 514 LGFQPNLITWTTLISGLAQSGFGYEAILFFQKMQEAGIRPSIASITSVLLACTDIPSLWY 573
Query: 351 GKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAM 410
G+ +H + R + V + T+LVDMYAKCGS+ A+ + +S+ +L NAM++AYA+
Sbjct: 574 GRAIHGFITRHEFCLSVPVATSLVDMYAKCGSIDEAKKVFHMMSSKELPIYNAMISAYAL 633
Query: 411 HGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFF-DLMAYYDVKPSLK 469
HG E +A F+ + G PD I+F S LSAC HAG + G F D+++ +++ P ++
Sbjct: 634 HGQAVEALALFKHLQKEGIEPDSITFTSILSACSHAGLVNEGLNLFADMVSKHNMNPIME 693
Query: 470 HYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIEL 529
HY C+V LLSR G L EA I +P PD+ + G+LL C H +E G+ + L +L
Sbjct: 694 HYGCVVSLLSRCGNLDEALRLILTMPFQPDAHILGSLLTACREHHEIELGEYLSKHLFKL 753
Query: 530 EPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRS 589
EP+N+GNYV L+N +A AGRW +++ R MK R + K+PGCSWI+ +++ F A D S
Sbjct: 754 EPSNSGNYVALSNAYAAAGRWVEVSNMRDLMKVRGLRKNPGCSWIQTGGKLNVFVAGDGS 813
Query: 590 HDRSEEIYTII 600
H ++EEIY ++
Sbjct: 814 HPKTEEIYAML 824
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 141/480 (29%), Positives = 228/480 (47%), Gaps = 67/480 (13%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
N+ SW+A++G + G+ E+A+ MQ G+ P+ L +VL AC LQ + LGK H
Sbjct: 146 NVFSWAAIVGLQCRMGFSEDALLGFIEMQENGVFPDNFVLPNVLKACGSLQLIGLGKGVH 205
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
GY+ + GF + FV + LVD+Y +CG + A K+F KN V+ N++IVGY +NG
Sbjct: 206 GYVLKMGFGACVFVSSSLVDMYGKCGVLEDARKVFDSMVEKNVVTWNSMIVGYVQNG--- 262
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
L EA +F D+ + +GIEPT T S
Sbjct: 263 --------------------------------LNQEAIDVFYDMRV-EGIEPTRVTVASF 289
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
L A A++++L +GK+ HA+AI L D +G +++ Y + + A++ F +
Sbjct: 290 LSASANLDALIEGKQGHAIAILNSLDLDNILGSSIINFYSKVGLIEDAELVFSRM----- 344
Query: 298 LLGKMKEDGFEPNVYTWN--------------AMQLFSEMLSLDLTPDIYTVGIILSACS 343
E +V TWN A+ + M S +L D T+ ILSA +
Sbjct: 345 ---------LEKDVVTWNLLISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSSILSASA 395
Query: 344 SLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNA 403
+ ++ GK+ H Y IR +SDV + +++DMYAKC + AR + + DLV N
Sbjct: 396 VTSNIKLGKEGHCYCIRRNLESDVVVANSIIDMYAKCERIDDARKVFDSTTERDLVLWNT 455
Query: 404 MLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYD 463
+L AYA G E + F ++ P+ IS+ S + + G + + F M
Sbjct: 456 LLAAYAQVGLSGEALKLFYQMQFDSVPPNVISWNSVILGFLRNGQVNEAKDMFSQMQSLG 515
Query: 464 VKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMA---PDSVMWGALLGGCVSHGNLEFGQ 520
+P+L +T ++ L+++G EA F +K+ A P ++L C +L +G+
Sbjct: 516 FQPNLITWTTLISGLAQSGFGYEAILFFQKMQEAGIRPSIASITSVLLACTDIPSLWYGR 575
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 106/460 (23%), Positives = 191/460 (41%), Gaps = 67/460 (14%)
Query: 66 IGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNG- 124
I ++G+ +E++ +L M+ E + +L C + L G++ H I +NG
Sbjct: 51 ISSLCKDGHLQESVHLLSEMEFEDFQIGPEIYGELLQGCVYERALHTGQQIHARILKNGD 110
Query: 125 -FMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELF 183
F N +V LV Y +C A+++F + ++N S I+ C G +A F
Sbjct: 111 FFAKNEYVETKLVVFYAKCDFPEVAVRLFHRLRVRNVFSWAAIVGLQCRMGFSEDALLGF 170
Query: 184 DQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACAD 243
+M+ +G+ P +F +VL AC
Sbjct: 171 IEMQ------------------------------------ENGVFPDNFVLPNVLKACGS 194
Query: 244 MNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMK 303
+ + GK +H + +G + FV +LV+MY + L A+ FD +
Sbjct: 195 LQLIGLGKGVHGYVLKMGFGACVFVSSSLVDMYGKCGVLEDARKVFDSM----------- 243
Query: 304 EDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSSLATME 349
E NV TWN+M +F +M + P TV LSA ++L +
Sbjct: 244 ---VEKNVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVASFLSASANLDALI 300
Query: 350 RGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYA 409
GKQ HA AI D D +G+++++ Y+K G ++ A L + R+ D+V+ N ++++Y
Sbjct: 301 EGKQGHAIAILNSLDLDNILGSSIINFYSKVGLIEDAELVFSRMLEKDVVTWNLLISSYV 360
Query: 410 MHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLK 469
H + + + + R D ++ S LSA +IK G E +++ +
Sbjct: 361 QHHQVGKALNMCHLMRSENLRFDSVTLSSILSASAVTSNIKLGKEGHCYCIRRNLESDVV 420
Query: 470 HYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
++D+ ++ + +A + D V+W LL
Sbjct: 421 VANSIIDMYAKCERIDDARKVFDSTT-ERDLVLWNTLLAA 459
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 133/285 (46%), Gaps = 9/285 (3%)
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALG--LQSDTFVGGALVEMYCRYQDLVAAQMAFDE 291
+G +L C +L G++IHA + G + +V LV Y + A F
Sbjct: 82 YGELLQGCVYERALHTGQQIHARILKNGDFFAKNEYVETKLVVFYAKCDFPEVAVRLFHR 141
Query: 292 IENIENLLGKMKEDGFEPNV-YTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMER 350
+ + N+ G + + ++ +A+ F EM + PD + + +L AC SL +
Sbjct: 142 LR-VRNVFSWAAIVGLQCRMGFSEDALLGFIEMQENGVFPDNFVLPNVLKACGSLQLIGL 200
Query: 351 GKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAM 410
GK VH Y ++ G+ + V + ++LVDMY KCG L+ AR + + ++V+ N+M+ Y
Sbjct: 201 GKGVHGYVLKMGFGACVFVSSSLVDMYGKCGVLEDARKVFDSMVEKNVVTWNSMIVGYVQ 260
Query: 411 HGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSE--FFDLMAYYDVKPSL 468
+G +E I F + G P ++ S LSA + ++ G + ++ D+ L
Sbjct: 261 NGLNQEAIDVFYDMRVEGIEPTRVTVASFLSASANLDALIEGKQGHAIAILNSLDLDNIL 320
Query: 469 KHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSH 513
+ +++ S+ G + +A E + + D V W L+ V H
Sbjct: 321 G--SSIINFYSKVGLIEDA-ELVFSRMLEKDVVTWNLLISSYVQH 362
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 98/223 (43%), Gaps = 9/223 (4%)
Query: 316 AMQLFSEMLSLDLT--PDIYTVGIILSACSSLATMERGKQVHAYAIRCG--YDSDVHIGT 371
++ L SEM D P+IY G +L C + G+Q+HA ++ G + + ++ T
Sbjct: 63 SVHLLSEMEFEDFQIGPEIY--GELLQGCVYERALHTGQQIHARILKNGDFFAKNEYVET 120
Query: 372 ALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRP 431
LV YAKC + A + R+ ++ S A++ G ++ + F + +G P
Sbjct: 121 KLVVFYAKCDFPEVAVRLFHRLRVRNVFSWAAIVGLQCRMGFSEDALLGFIEMQENGVFP 180
Query: 432 DHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFI 491
D+ + L AC I G + + + +VD+ + G L +A +
Sbjct: 181 DNFVLPNVLKACGSLQLIGLGKGVHGYVLKMGFGACVFVSSSLVDMYGKCGVLEDARKVF 240
Query: 492 KKIPMAPDSVMWGALLGGCVSHG-NLEFGQIAADRLIE-LEPN 532
+ + + V W +++ G V +G N E + D +E +EP
Sbjct: 241 DSM-VEKNVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPT 282
>gi|356574473|ref|XP_003555371.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 337 bits (865), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 193/598 (32%), Positives = 312/598 (52%), Gaps = 74/598 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG ++DA++VF M RD V
Sbjct: 292 MYAKCGRMEDAERVFASMLCRD------------------------------------YV 315
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ ++ G QN +A+ MQ +P+ ++ +++ A R L GKE H Y
Sbjct: 316 SWNTLLSGLVQNELYRDALNYFRDMQNSAQKPDQVSVLNLIAASGRSGNLLNGKEVHAYA 375
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
RNG SN + N L+D+Y +C C +GY
Sbjct: 376 IRNGLDSNMQIGNTLIDMYAKC--------------------CCVKHMGYA--------- 406
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
F+ M ++ +ISW ++I+GY N + EA ++FR + ++ G++ GSVL A
Sbjct: 407 --FECMH----EKDLISWTTIIAGYAQNECHLEAINLFRKVQVK-GMDVDPMMIGSVLRA 459
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C+ + S +EIH L +D + A+V +Y A+ AF+ I + + +
Sbjct: 460 CSGLKSRNFIREIHGYVFKRDL-ADIMLQNAIVNVYGEVGHRDYARRAFESIRSKDIVSW 518
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
N A++LF + ++ PD + LSA ++L+++++GK++H + IR
Sbjct: 519 TSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIR 578
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
G+ + I ++LVDMYA CG+++++R + + DL+ +M+ A MHG G E IA
Sbjct: 579 KGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHGCGNEAIAL 638
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLS 479
F+++ PDHI+FL+ L AC H+G + G FF++M Y Y ++P +HY CMVDLLS
Sbjct: 639 FKKMTDENVIPDHITFLALLYACSHSGLMVEGKRFFEIMKYGYQLEPWPEHYACMVDLLS 698
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
R+ L EAY+F++ +P+ P S +W ALLG C H N E G++AA L++ + N+G Y +
Sbjct: 699 RSNSLEEAYQFVRSMPIKPSSEVWCALLGACHIHSNKELGELAAKELLQSDTKNSGKYAL 758
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
++N+FA GRW+D+ R +MK + K+PGCSWIE ++IH F A D+SH ++++IY
Sbjct: 759 ISNIFAADGRWNDVEEVRLRMKGNGLKKNPGCSWIEVDNKIHTFMARDKSHPQTDDIY 816
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 146/522 (27%), Positives = 220/522 (42%), Gaps = 88/522 (16%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGSL DA KVF M ER +WN
Sbjct: 88 MYEKCGSLKDAVKVFDEMTERTIFTWN--------------------------------- 114
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
A++G F +G EAI + M+ G+ +A T SVL AC L + LG E HG
Sbjct: 115 ---AMMGAFVSSGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGVA 171
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNE--VSCNTIIVGYCENGNVAE 178
+ GF FV N L+ +Y +CGD+ A +F ++ E VS N+II + G E
Sbjct: 172 VKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVTEGKCLE 231
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
A LF +M+ +GV ++TF + L
Sbjct: 232 ALSLFRRMQEVGVA------------------------------------SNTYTFVAAL 255
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
D + ++ G IH A+ +D +V AL+ MY + + A+ F + + +
Sbjct: 256 QGVEDPSFVKLGMGIHGAALKSNHFADVYVANALIAMYAKCGRMEDAERVFASMLCRDYV 315
Query: 299 LGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYA 358
G N +A+ F +M + PD +V +++A + GK+VHAYA
Sbjct: 316 SWNTLLSGLVQNELYRDALNYFRDMQNSAQKPDQVSVLNLIAASGRSGNLLNGKEVHAYA 375
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGI 418
IR G DS++ IG L+DMYAKC +KH A++ + DL+S ++ YA + E I
Sbjct: 376 IRNGLDSNMQIGNTLIDMYAKCCCVKHMGYAFECMHEKDLISWTTIIAGYAQNECHLEAI 435
Query: 419 AHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLL 478
FR++ G D + S L AC S F + Y K L ++
Sbjct: 436 NLFRKVQVKGMDVDPMMIGSVLRACSGLKS----RNFIREIHGYVFKRDLADIMLQNAIV 491
Query: 479 SRAGELGE------AYEFIKKIPMAPDSVMWGALLGGCVSHG 514
+ GE+G A+E I+ + D V W +++ CV +G
Sbjct: 492 NVYGEVGHRDYARRAFESIR----SKDIVSWTSMITCCVHNG 529
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 100/429 (23%), Positives = 192/429 (44%), Gaps = 71/429 (16%)
Query: 98 SSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSI 157
S +L C ++ L G++ H + ++ + F+ L+ +Y +CG + A+K+F
Sbjct: 50 SLLLDLCVAVKALPQGQQLHARLLKSHL--SAFLATKLLHMYEKCGSLKDAVKVF----- 102
Query: 158 KNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSM 217
D+M +R I +WN+M+ +V + Y EA +
Sbjct: 103 --------------------------DEM----TERTIFTWNAMMGAFVSSGKYLEAIEL 132
Query: 218 FRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYC 277
++++ + G+ + TF SVL AC + R G EIH +A+ G FV AL+ MY
Sbjct: 133 YKEMRVL-GVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGFGEFVFVCNALIAMYG 191
Query: 278 RYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWN--------------AMQLFSEM 323
+ DL A++ FD G M E + + +WN A+ LF M
Sbjct: 192 KCGDLGGARVLFD---------GIMME---KEDTVSWNSIISAHVTEGKCLEALSLFRRM 239
Query: 324 LSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSL 383
+ + + YT L + ++ G +H A++ + +DV++ AL+ MYAKCG +
Sbjct: 240 QEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAALKSNHFADVYVANALIAMYAKCGRM 299
Query: 384 KHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSAC 443
+ A + + D VS N +L+ + ++ + +FR + S +PD +S L+ ++A
Sbjct: 300 EDAERVFASMLCRDYVSWNTLLSGLVQNELYRDALNYFRDMQNSAQKPDQVSVLNLIAAS 359
Query: 444 VHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSR---AGELGEAYEFIKKIPMAPDS 500
+G++ G E + +++ ++D+ ++ +G A+E + + D
Sbjct: 360 GRSGNLLNGKEVHAYAIRNGLDSNMQIGNTLIDMYAKCCCVKHMGYAFECMHE----KDL 415
Query: 501 VMWGALLGG 509
+ W ++ G
Sbjct: 416 ISWTTIIAG 424
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 149/341 (43%), Gaps = 49/341 (14%)
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C + +L +G+++HA + L + F+ L+ MY + L A FDE+
Sbjct: 56 CVAVKALPQGQQLHARLLKSHLSA--FLATKLLHMYEKCGSLKDAVKVFDEMT------- 106
Query: 301 KMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSSLA 346
E ++TWNAM +L+ EM L + D T +L AC +L
Sbjct: 107 -------ERTIFTWNAMMGAFVSSGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALG 159
Query: 347 TMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRI--STPDLVSQNAM 404
G ++H A++CG+ V + AL+ MY KCG L AR+ + I D VS N++
Sbjct: 160 ESRLGAEIHGVAVKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSI 219
Query: 405 LTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDV 464
++A+ G E ++ FRR+ G + +F++AL +K G M +
Sbjct: 220 ISAHVTEGKCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLG------MGIHGA 273
Query: 465 KPSLKHY------TCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEF 518
H+ ++ + ++ G + +A + + D V W LL G V + E
Sbjct: 274 ALKSNHFADVYVANALIAMYAKCGRMEDAERVFASM-LCRDYVSWNTLLSGLVQN---EL 329
Query: 519 GQIAADRLIELEPN-NTGNYVMLANLFAYAGRWSDLARTRQ 558
+ A + +++ + + V + NL A +GR +L ++
Sbjct: 330 YRDALNYFRDMQNSAQKPDQVSVLNLIAASGRSGNLLNGKE 370
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 83/179 (46%), Gaps = 3/179 (1%)
Query: 337 IILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTP 396
++L C ++ + +G+Q+HA ++ + + T L+ MY KCGSLK A + ++
Sbjct: 51 LLLDLCVAVKALPQGQQLHARLLKSHLSA--FLATKLLHMYEKCGSLKDAVKVFDEMTER 108
Query: 397 DLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFF 456
+ + NAM+ A+ G E I ++ + G D +F S L AC G + G+E
Sbjct: 109 TIFTWNAMMGAFVSSGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALGESRLGAEIH 168
Query: 457 DLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPM-APDSVMWGALLGGCVSHG 514
+ + ++ + + G+LG A I M D+V W +++ V+ G
Sbjct: 169 GVAVKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVTEG 227
>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
Length = 820
Score = 337 bits (865), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 181/549 (32%), Positives = 298/549 (54%), Gaps = 39/549 (7%)
Query: 55 ETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGK 114
E ++VSW+ ++ + +N EE++ + RM+ G +PN T +SVL AC L+ ++GK
Sbjct: 207 EYKDMVSWTGMVACYVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGK 266
Query: 115 EFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
HG + ++ FV L+D+Y + GD+ AL++
Sbjct: 267 AVHGCAFKTSYLEELFVGVELIDLYIKSGDVDDALQV----------------------- 303
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDG-IEPTSFT 233
F++M + +I W+ MI+ Y + +EA MF MR G + P FT
Sbjct: 304 --------FEEMP----KDDVIPWSFMIARYAQSEQSEEAIEMF--CRMRRGLVLPNQFT 349
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
S+L ACA + L+ G +IH + +GL + FV AL++MY + + + F E
Sbjct: 350 LASLLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRMENSLQLFSESP 409
Query: 294 NIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ 353
N ++ G+ A+ LF +ML + T +L AC+ +A +E G Q
Sbjct: 410 NCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQVQGTEVTYSSVLRACAGIAALEPGSQ 469
Query: 354 VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGH 413
+H+ +++ YD + +G AL+DMYAKCG++K ARL + + D VS NAM++ Y++HG
Sbjct: 470 IHSLSVKTIYDKNTVVGNALIDMYAKCGNIKDARLVFDMLREHDQVSWNAMISGYSVHGL 529
Query: 414 GKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYT 472
E + F +L + +PD ++F+ LSAC +AG + G +F M YD++P +HYT
Sbjct: 530 YGEALKTFESMLETECKPDKVTFVGILSACSNAGLLDRGQAYFKSMVEEYDIEPCAEHYT 589
Query: 473 CMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPN 532
CMV LL R+G L +A + + +IP P ++W ALL CV H ++E G+I+A R++E+EP
Sbjct: 590 CMVWLLGRSGHLDKAAKLVHEIPFEPSVMVWRALLSACVIHNDVELGRISAQRVLEIEPE 649
Query: 533 NTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDR 592
+ +V+L+N++A A RW ++A R MK + + K PG SWIE++ +H F D SH
Sbjct: 650 DEATHVLLSNIYANARRWGNVASIRTSMKRKGIRKEPGLSWIENQGRVHYFSVGDTSHPD 709
Query: 593 SEEIYTIID 601
++ I +++
Sbjct: 710 TKLINGMLE 718
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 123/428 (28%), Positives = 197/428 (46%), Gaps = 76/428 (17%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y K G +DDA +VF+ MP+ D ++
Sbjct: 290 LYIKSGDVDDALQVFEEMPKDD------------------------------------VI 313
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
WS +I + Q+ EEAI M RM+ + PN TL+S+L ACA L L LG + H ++
Sbjct: 314 PWSFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQIHCHV 373
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G N FV N L+D+Y +CG M ++L++FS+ +VS NT+IVGY + GN +A
Sbjct: 374 VKVGLDMNVFVSNALMDMYAKCGRMENSLQLFSESPNCTDVSWNTVIVGYVQAGNGEKAL 433
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LF M VQ T T+ SVL A
Sbjct: 434 ILFKDMLECQVQ------------------------------------GTEVTYSSVLRA 457
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA + +L G +IH+L++ +T VG AL++MY + ++ A++ FD + + +
Sbjct: 458 CAGIAALEPGSQIHSLSVKTIYDKNTVVGNALIDMYAKCGNIKDARLVFDMLREHDQVSW 517
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G+ + A++ F ML + PD T ILSACS+ ++RG Q + ++
Sbjct: 518 NAMISGYSVHGLYGEALKTFESMLETECKPDKVTFVGILSACSNAGLLDRG-QAYFKSMV 576
Query: 361 CGYDSD--VHIGTALVDMYAKCGSL-KHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEG 417
YD + T +V + + G L K A+L ++ P ++ A+L+A +H + G
Sbjct: 577 EEYDIEPCAEHYTCMVWLLGRSGHLDKAAKLVHEIPFEPSVMVWRALLSACVIHNDVELG 636
Query: 418 IAHFRRIL 425
+R+L
Sbjct: 637 RISAQRVL 644
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 108/453 (23%), Positives = 186/453 (41%), Gaps = 41/453 (9%)
Query: 84 RMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCG 143
R E N S+L +C R + GK H I + G C
Sbjct: 34 RTSHSSPEFNTYIYGSLLQSCIRNGDCATGKYLHCEIIKKG----------------NCL 77
Query: 144 DMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMIS 203
D+ + N ++ Y + ++ +A +LFD+M R +S+ ++I
Sbjct: 78 DLFAN---------------NILLNFYVKYDSLPDAAKLFDEMP----DRNTVSFVTLIQ 118
Query: 204 GYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQ 263
GY + EA +F L +G E F F +VL + G +HA LG
Sbjct: 119 GYSQCLRFSEAIGLFSRL-QGEGHELNPFVFSTVLKLLVSAEWAKLGFSVHACVYKLGFD 177
Query: 264 SDTFVGGALVEMY--CRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFS 321
SD FVG AL++ Y C Y + A+ FD IE + + + N +++LFS
Sbjct: 178 SDAFVGTALIDCYSVCGYAE--CARQVFDAIEYKDMVSWTGMVACYVENECFEESLKLFS 235
Query: 322 EMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCG 381
M + P+ +T +L AC L GK VH A + Y ++ +G L+D+Y K G
Sbjct: 236 RMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEELFVGVELIDLYIKSG 295
Query: 382 SLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALS 441
+ A ++ + D++ + M+ YA +E I F R+ P+ + S L
Sbjct: 296 DVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQ 355
Query: 442 ACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSV 501
AC ++ G++ + + ++ ++D+ ++ G + + + + P D V
Sbjct: 356 ACASLVDLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRMENSLQLFSESPNCTD-V 414
Query: 502 MWGALLGGCVSHGNLEFGQIAADRLIELEPNNT 534
W ++ G V GN E I ++E + T
Sbjct: 415 SWNTVIVGYVQAGNGEKALILFKDMLECQVQGT 447
>gi|357131877|ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 808
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 198/608 (32%), Positives = 309/608 (50%), Gaps = 81/608 (13%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KC S A VF+ MP RD +V
Sbjct: 173 VYAKCASFRHAATVFRRMPARD------------------------------------VV 196
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+A++ G+ +G + I L MQ + PNA TL ++LP A+ LS G+ H Y
Sbjct: 197 AWNAMLAGYALHGKYSDTIACLLLMQDDH-APNASTLVALLPLLAQHGALSQGRAVHAYS 255
Query: 121 TRNGFMSNP----FVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNV 176
R + + V L+D+Y +CG ++ A ++F +++NEV+
Sbjct: 256 VRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVT-------------- 301
Query: 177 AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRD--GIEPTSFTF 234
W++++ G+V EAFS+F+D+L + + PTS
Sbjct: 302 ---------------------WSALVGGFVLCGRMLEAFSLFKDMLAQGLCFLSPTSV-- 338
Query: 235 GSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIEN 294
S L ACA+++ L GK++HAL GL +D G +L+ MY + + A FD++
Sbjct: 339 ASALRACANLSDLCLGKQLHALLAKSGLHTDLTAGNSLLSMYAKAGLIDQATTLFDQMVV 398
Query: 295 IENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV 354
+ + G+ N A ++F +M + ++ PD+ T+ ++ ACS LA ++ GK
Sbjct: 399 KDTVSYSALVSGYVQNGKADEAFRVFRKMQACNVQPDVATMVSLIPACSHLAALQHGKCG 458
Query: 355 HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHG 414
H I G S+ I AL+DMYAKCG + +R + + D+VS N M+ Y +HG G
Sbjct: 459 HGSVIVRGIASETSICNALIDMYAKCGRIDLSRQIFDVMPARDIVSWNTMIAGYGIHGLG 518
Query: 415 KEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTC 473
KE A F + PD ++F+ +SAC H+G + G +F +MA+ Y + P ++HY
Sbjct: 519 KEATALFLDMKHQACEPDDVTFICLISACSHSGLVTEGKRWFHMMAHKYGITPRMEHYIG 578
Query: 474 MVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNN 533
MVDLL+R G L EAY+FI+ +P+ D +WGALLG C H N++ G+ + + +L P
Sbjct: 579 MVDLLARGGFLDEAYQFIQGMPLKADVRVWGALLGACRVHKNIDLGKQVSSMIQQLGPEG 638
Query: 534 TGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRS 593
TGN+V+L+N+F+ AGR+ + A R K++ KSPGCSWIE +H F DRSH +S
Sbjct: 639 TGNFVLLSNIFSAAGRFDEAAEVRIIQKEQGFKKSPGCSWIEINGSLHAFIGGDRSHAQS 698
Query: 594 EEIYTIID 601
EIY +D
Sbjct: 699 SEIYQELD 706
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/366 (26%), Positives = 172/366 (46%), Gaps = 46/366 (12%)
Query: 174 GNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGI--EPTS 231
G+++ AR LFDQ+ GI +N++I Y SL A ++ +R +P +
Sbjct: 77 GDLSLARHLFDQIP----APGIHDYNALIRAY---SLRGPALALRLYRSLRRRRLPQPNN 129
Query: 232 FTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDE 291
+TF VL AC+ + LR + +H A GL +D FV ALV++Y + A F
Sbjct: 130 YTFPFVLKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRR 189
Query: 292 IENIENLLGKMKEDGFEPNVYTWNAMQL-------FSEMLSL------DLTPDIYTVGII 338
+ +V WNAM +S+ ++ D P+ T+ +
Sbjct: 190 MP--------------ARDVVAWNAMLAGYALHGKYSDTIACLLLMQDDHAPNASTLVAL 235
Query: 339 LSACSSLATMERGKQVHAYAIRC----GYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS 394
L + + +G+ VHAY++R + V +GTAL+DMYAKCG L +A ++ ++
Sbjct: 236 LPLLAQHGALSQGRAVHAYSVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMA 295
Query: 395 TPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASG---FRPDHISFLSALSACVHAGSIKT 451
+ V+ +A++ + + G E + F+ +LA G P ++ SAL AC + +
Sbjct: 296 VRNEVTWSALVGGFVLCGRMLEAFSLFKDMLAQGLCFLSPTSVA--SALRACANLSDLCL 353
Query: 452 GSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCV 511
G + L+A + L ++ + ++AG + +A ++ + D+V + AL+ G V
Sbjct: 354 GKQLHALLAKSGLHTDLTAGNSLLSMYAKAGLIDQATTLFDQM-VVKDTVSYSALVSGYV 412
Query: 512 SHGNLE 517
+G +
Sbjct: 413 QNGKAD 418
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 57/136 (41%), Gaps = 1/136 (0%)
Query: 380 CGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSA 439
CG L AR + +I P + NA++ AY++ G + +P++ +F
Sbjct: 76 CGDLSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFV 135
Query: 440 LSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPD 499
L AC +++ A + L T +VD+ ++ A +++P A D
Sbjct: 136 LKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMP-ARD 194
Query: 500 SVMWGALLGGCVSHGN 515
V W A+L G HG
Sbjct: 195 VVAWNAMLAGYALHGK 210
>gi|225446273|ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400
[Vitis vinifera]
gi|296090299|emb|CBI40118.3| unnamed protein product [Vitis vinifera]
Length = 618
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 195/550 (35%), Positives = 304/550 (55%), Gaps = 42/550 (7%)
Query: 57 PNLVSWSAVIGGFTQNGYD-EEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKE 115
PN +++ +I G T I ++M+ G+ PN T V ACA L L+ G+
Sbjct: 88 PNEYAFNIMIRGLTTTWQKFNLTIEFYYQMKDFGIRPNNFTYPFVFIACANLLVLNHGQC 147
Query: 116 FHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGN 175
H + ++G ++ V + L+ +Y RCG E+ C
Sbjct: 148 AHSGVLKSGLCADGHVRHSLITMYSRCG----------------ELGC------------ 179
Query: 176 VAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRD-GIEPTSFTF 234
AR +FD++ ++ ++SWNSMISGY +A +F + MRD G EP T
Sbjct: 180 ---ARRVFDEIS----EKDLVSWNSMISGYSRMGYAGDAVGLFGE--MRDAGFEPDEMTL 230
Query: 235 GSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIEN 294
S+L AC D+ L G I + + ++FVG AL+ MY + DL +A+ FD +
Sbjct: 231 VSILGACGDLGDLGLGSWIEGFVVENEMDLNSFVGSALIGMYGKCGDLSSARRVFDRMVK 290
Query: 295 IENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV 354
+ + G+ N + A+ LFS M + PD T+ +LSAC+S+ ++ GK +
Sbjct: 291 KDVVTWNAMITGYAQNGVSDEAIILFSGMRESGVNPDKITLVGVLSACASIGALDFGKWL 350
Query: 355 HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHG 414
YA G +D+++ TAL+DMYAKCGSL A ++ + + VS NAM++A A HG
Sbjct: 351 DTYASERGLQNDIYVSTALIDMYAKCGSLDDALRVFEDMPQKNEVSWNAMISALAFHGRP 410
Query: 415 KEGIAHFRRILASG--FRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHY 471
+E ++ F+R+ G RP+ ISF+ LSACVHAG + G + FDLM+ + + P ++H+
Sbjct: 411 QESLSLFKRMSKEGGAVRPNDISFIGVLSACVHAGLVDEGRQLFDLMSSSFGLVPKIEHH 470
Query: 472 TCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEP 531
+CMVDLL+RAG + EA++FI+K+P PD V+ GALLG C N++ + L+E+EP
Sbjct: 471 SCMVDLLARAGHVHEAWDFIEKMPEKPDEVVLGALLGACQKRRNVDVSERVMHMLLEMEP 530
Query: 532 NNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHD 591
N+GNY++ + +FA RW D AR R M+ R + K+PGCSWIE +++H+F A D H
Sbjct: 531 LNSGNYIISSKIFANMKRWDDSARMRVLMRQRGVTKTPGCSWIEIENQVHEFHAGDVLHF 590
Query: 592 RSEEIYTIID 601
S+++ +I+
Sbjct: 591 ISQDMCQVIN 600
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/403 (26%), Positives = 185/403 (45%), Gaps = 5/403 (1%)
Query: 112 LGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYC 171
+ + F + ++ + + + L+ + ++C S +I ++ I N ++ +
Sbjct: 11 ISRHFTKALAKSQRHAQQTLTDKLLSLLKQCTSTKSLQQIHTQMIINAIHKPNFLLHRFI 70
Query: 172 ENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTS 231
+ + A LF Q+ + I + + + +L E + +D GI P +
Sbjct: 71 DLKDFNNASLLFSQIPYPNEYAFNIMIRGLTTTWQKFNLTIEFYYQMKDF----GIRPNN 126
Query: 232 FTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDE 291
FT+ V IACA++ L G+ H+ + GL +D V +L+ MY R +L A+ FDE
Sbjct: 127 FTYPFVFIACANLLVLNHGQCAHSGVLKSGLCADGHVRHSLITMYSRCGELGCARRVFDE 186
Query: 292 IENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG 351
I + + G+ Y +A+ LF EM PD T+ IL AC L + G
Sbjct: 187 ISEKDLVSWNSMISGYSRMGYAGDAVGLFGEMRDAGFEPDEMTLVSILGACGDLGDLGLG 246
Query: 352 KQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMH 411
+ + + D + +G+AL+ MY KCG L AR + R+ D+V+ NAM+T YA +
Sbjct: 247 SWIEGFVVENEMDLNSFVGSALIGMYGKCGDLSSARRVFDRMVKKDVVTWNAMITGYAQN 306
Query: 412 GHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHY 471
G E I F + SG PD I+ + LSAC G++ G + ++ +
Sbjct: 307 GVSDEAIILFSGMRESGVNPDKITLVGVLSACASIGALDFGKWLDTYASERGLQNDIYVS 366
Query: 472 TCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
T ++D+ ++ G L +A + +P + V W A++ HG
Sbjct: 367 TALIDMYAKCGSLDDALRVFEDMPQK-NEVSWNAMISALAFHG 408
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 117/426 (27%), Positives = 174/426 (40%), Gaps = 106/426 (24%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +CG L A++VF + E+D VSWNS+++
Sbjct: 170 MYSRCGELGCARRVFDEISEKDLVSWNSMIS----------------------------- 200
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
G+++ GY +A+G+ M+ G EP+ TL S+L AC L L LG G++
Sbjct: 201 -------GYSRMGYAGDAVGLFGEMRDAGFEPDEMTLVSILGACGDLGDLGLGSWIEGFV 253
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
N N FV + L+ +Y +CGD+ SA ++F + K+ V+ N +I GY +NG EA
Sbjct: 254 VENEMDLNSFVGSALIGMYGKCGDLSSARRVFDRMVKKDVVTWNAMITGYAQNGVSDEAI 313
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LF M G+ P T VL A
Sbjct: 314 ILFSGMR------------------------------------ESGVNPDKITLVGVLSA 337
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA + +L GK + A GLQ+D +V AL++MY + L A F
Sbjct: 338 CASIGALDFGKWLDTYASERGLQNDIYVSTALIDMYAKCGSLDDALRVF----------- 386
Query: 301 KMKEDGFEPNVYTWNAM--------------QLFSEMLSLD--LTP-DIYTVGIILSACS 343
ED + N +WNAM LF M + P DI +G +LSAC
Sbjct: 387 ---EDMPQKNEVSWNAMISALAFHGRPQESLSLFKRMSKEGGAVRPNDISFIG-VLSACV 442
Query: 344 SLATMERGKQVH-AYAIRCGYDSDVHIGTALVDMYAKCGSLKHA-RLAYKRISTPDLVSQ 401
++ G+Q+ + G + + +VD+ A+ G + A K PD V
Sbjct: 443 HAGLVDEGRQLFDLMSSSFGLVPKIEHHSCMVDLLARAGHVHEAWDFIEKMPEKPDEVVL 502
Query: 402 NAMLTA 407
A+L A
Sbjct: 503 GALLGA 508
>gi|242096002|ref|XP_002438491.1| hypothetical protein SORBIDRAFT_10g020540 [Sorghum bicolor]
gi|241916714|gb|EER89858.1| hypothetical protein SORBIDRAFT_10g020540 [Sorghum bicolor]
Length = 794
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 196/599 (32%), Positives = 309/599 (51%), Gaps = 55/599 (9%)
Query: 25 SWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFR 84
++N++++ A GLV +A + + D +V+W+ ++ Q+G EAI +L+
Sbjct: 200 AFNALLSMYARLGLVDDAQTLFGSVGATDVPGGGVVTWNTMVSLLVQSGRCGEAIEVLYD 259
Query: 85 MQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNG-FMSNPFVVNGLVDVYRRCG 143
M A G+ P+ T +S LPAC++L+ LSLG+E H Y+ ++ +N FV + LVD+
Sbjct: 260 MVARGVRPDGVTFASALPACSQLEMLSLGREMHAYVLKDADLAANSFVASALVDM----- 314
Query: 144 DMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMIS 203
Y + V AR +FD + Q G+ WN+MI
Sbjct: 315 --------------------------YASHERVGAARLVFDMVPAGERQLGL--WNAMIC 346
Query: 204 GYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQ 263
GY L ++A +F + G+ P+ T VL +CA + + +H + G+
Sbjct: 347 GYAQAGLDEDALELFARMETEAGVVPSETTIAGVLPSCARSETFAGKEAVHGYVVKRGMA 406
Query: 264 SDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEM 323
+ FV AL+++Y R D+ AA+ F IE + + G + +A QL EM
Sbjct: 407 DNPFVQNALMDLYARLGDMDAARWIFATIEPRDVVSWNTLITGCVVQGHIRDAFQLVREM 466
Query: 324 LSL------------------DLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDS 365
+ P+ T+ +L C+ LA RGK++H YA+R DS
Sbjct: 467 QQQGRFTDAATEDGIAGADEEPVVPNNITLMTLLPGCAMLAAPARGKEIHGYAVRHALDS 526
Query: 366 DVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRIL 425
DV +G+ALVDMYAKCG L +R + R+ ++++ N ++ AY MHG G E IA F R++
Sbjct: 527 DVAVGSALVDMYAKCGCLALSRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAIALFDRMV 586
Query: 426 ASG-FRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGE 483
AS +P+ ++F++AL+AC H+G + G E F M + V+P+ + C VD+L RAG
Sbjct: 587 ASDEAKPNEVTFIAALAACSHSGMVDRGLEMFRSMKRNHGVEPTPDLHACAVDILGRAGR 646
Query: 484 LGEAYEFIKKI-PMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLAN 542
L EAY I + P W + LG C H N+ G+IAA+RL ELEP+ +YV+L N
Sbjct: 647 LDEAYRIISSMEPGEQQVSAWSSFLGACRLHRNVALGEIAAERLFELEPDEASHYVLLCN 706
Query: 543 LFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
+++ AG W + R +M+ R + K PGCSWIE IH+F A + +H S ++ +D
Sbjct: 707 IYSAAGLWEKSSEVRSRMRQRGVSKEPGCSWIELDGVIHRFMAGESAHPESTLVHAHMD 765
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 142/569 (24%), Positives = 237/569 (41%), Gaps = 98/569 (17%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y +CG L A +F MP RD V++NS++ A CL R
Sbjct: 104 YARCGDLTAALALFDAMPSRDAVTFNSLIAAL-----------CLFR------------R 140
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARL-QKLSLGKEFHGYI 120
W A+ L M EG + TL SVL AC+ L + L LG+E H +
Sbjct: 141 WL-------------PALDALRDMLLEGHPLTSFTLVSVLLACSHLAEDLRLGREAHAFA 187
Query: 121 TRNGFMSNP--FVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
+NGF+ F N L+ +Y R G V +
Sbjct: 188 LKNGFLDGDERFAFNALLSMYARL-------------------------------GLVDD 216
Query: 179 ARELFDQMEHLGVQRG-IISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
A+ LF + V G +++WN+M+S V + EA + D++ R G+ P TF S
Sbjct: 217 AQTLFGSVGATDVPGGGVVTWNTMVSLLVQSGRCGEAIEVLYDMVAR-GVRPDGVTFASA 275
Query: 238 LIACADMNSLRKGKEIHALAIA-LGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
L AC+ + L G+E+HA + L +++FV ALV+MY ++ + AA++ FD + E
Sbjct: 276 LPACSQLEMLSLGREMHAYVLKDADLAANSFVASALVDMYASHERVGAARLVFDMVPAGE 335
Query: 297 NLLGKMKED--GFEPNVYTWNAMQLFSEM-LSLDLTPDIYTVGIILSACSSLATMERGKQ 353
LG G+ +A++LF+ M + P T+ +L +C+ T +
Sbjct: 336 RQLGLWNAMICGYAQAGLDEDALELFARMETEAGVVPSETTIAGVLPSCARSETFAGKEA 395
Query: 354 VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGH 413
VH Y ++ G + + AL+D+YA+ G + AR + I D+VS N ++T + GH
Sbjct: 396 VHGYVVKRGMADNPFVQNALMDLYARLGDMDAARWIFATIEPRDVVSWNTLITGCVVQGH 455
Query: 414 GKEGIAHFRRILASG------------------FRPDHISFLSALSACVHAGSIKTGSEF 455
++ R + G P++I+ ++ L C + G E
Sbjct: 456 IRDAFQLVREMQQQGRFTDAATEDGIAGADEEPVVPNNITLMTLLPGCAMLAAPARGKEI 515
Query: 456 FDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
+ + + + +VD+ ++ G L + ++P + + W L+ HG
Sbjct: 516 HGYAVRHALDSDVAVGSALVDMYAKCGCLALSRAVFDRLPRR-NVITWNVLIMAYGMHGL 574
Query: 516 LEFGQIAADRLI---ELEPNNTGNYVMLA 541
+ DR++ E +PN LA
Sbjct: 575 GDEAIALFDRMVASDEAKPNEVTFIAALA 603
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 115/446 (25%), Positives = 186/446 (41%), Gaps = 75/446 (16%)
Query: 97 LSSVLPACARLQKLSLGKEFHGYITRNGFM--SNPFVVNGLVDVYRRCGDMLSALKIFSK 154
L + A L+ L+ + HG R+ + P V N L+ Y RCGD+ +AL
Sbjct: 60 LPPAAKSAAALRSLTAVRSIHGAALRHDLLDGPTPAVSNALLTAYARCGDLTAALA---- 115
Query: 155 FSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEA 214
LFD M R +++NS+I+ + A
Sbjct: 116 ---------------------------LFDAMP----SRDAVTFNSLIAALCLFRRWLPA 144
Query: 215 FSMFRDLLMRDGIEPTSFTFGSVLIACADM-NSLRKGKEIHALAIALGL--QSDTFVGGA 271
RD+L+ +G TSFT SVL+AC+ + LR G+E HA A+ G + F A
Sbjct: 145 LDALRDMLL-EGHPLTSFTLVSVLLACSHLAEDLRLGREAHAFALKNGFLDGDERFAFNA 203
Query: 272 LVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAM-------------- 317
L+ MY R + AQ F + + G V TWN M
Sbjct: 204 LLSMYARLGLVDDAQTLFGSVGATDVPGG---------GVVTWNTMVSLLVQSGRCGEAI 254
Query: 318 QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDV----HIGTAL 373
++ +M++ + PD T L ACS L + G+++HAY ++ D+D+ + +AL
Sbjct: 255 EVLYDMVARGVRPDGVTFASALPACSQLEMLSLGREMHAYVLK---DADLAANSFVASAL 311
Query: 374 VDMYAKCGSLKHARLAYKRISTPD--LVSQNAMLTAYAMHGHGKEGIAHFRRI-LASGFR 430
VDMYA + ARL + + + L NAM+ YA G ++ + F R+ +G
Sbjct: 312 VDMYASHERVGAARLVFDMVPAGERQLGLWNAMICGYAQAGLDEDALELFARMETEAGVV 371
Query: 431 PDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEF 490
P + L +C + + + + + ++DL +R G++ +A +
Sbjct: 372 PSETTIAGVLPSCARSETFAGKEAVHGYVVKRGMADNPFVQNALMDLYARLGDM-DAARW 430
Query: 491 IKKIPMAPDSVMWGALLGGCVSHGNL 516
I D V W L+ GCV G++
Sbjct: 431 IFATIEPRDVVSWNTLITGCVVQGHI 456
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 111/231 (48%), Gaps = 19/231 (8%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y + G +D A+ +F + RD VSWN+++T C G + +A + + M
Sbjct: 418 LYARLGDMDAARWIFATIEPRDVVSWNTLITGCVVQGHIRDAFQLVREMQQQ-------- 469
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
G FT ++ G E + PN TL ++LP CA L + GKE HGY
Sbjct: 470 ------GRFTDAATEDGIAG----ADEEPVVPNNITLMTLLPGCAMLAAPARGKEIHGYA 519
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R+ S+ V + LVD+Y +CG + + +F + +N ++ N +I+ Y +G EA
Sbjct: 520 VRHALDSDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAI 579
Query: 181 ELFDQM-EHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPT 230
LFD+M + +++ + ++ + + D MFR + G+EPT
Sbjct: 580 ALFDRMVASDEAKPNEVTFIAALAACSHSGMVDRGLEMFRSMKRNHGVEPT 630
Score = 39.7 bits (91), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 90/236 (38%), Gaps = 44/236 (18%)
Query: 329 TPDIYTVGIILSACSSLATMERGKQVHAYAIRCGY--DSDVHIGTALVDMYAKCGSLKHA 386
T D + + + ++L ++ + +H A+R + AL+ YA+CG L A
Sbjct: 54 TLDRFALPPAAKSAAALRSLTAVRSIHGAALRHDLLDGPTPAVSNALLTAYARCGDLTAA 113
Query: 387 RLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVH- 445
+ + + D V+ N+++ A + + R +L G + +S L AC H
Sbjct: 114 LALFDAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEGHPLTSFTLVSVLLACSHL 173
Query: 446 AGSIKTGSE---------FFD---------LMAYY-------------------DVK-PS 467
A ++ G E F D L++ Y DV
Sbjct: 174 AEDLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQTLFGSVGATDVPGGG 233
Query: 468 LKHYTCMVDLLSRAGELGEAYEFIKKI---PMAPDSVMWGALLGGCVSHGNLEFGQ 520
+ + MV LL ++G GEA E + + + PD V + + L C L G+
Sbjct: 234 VVTWNTMVSLLVQSGRCGEAIEVLYDMVARGVRPDGVTFASALPACSQLEMLSLGR 289
>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
Length = 721
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 195/579 (33%), Positives = 298/579 (51%), Gaps = 70/579 (12%)
Query: 27 NSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQ 86
+++ A + +G V A E + +SS D +VSW+ +I + +N EA+ +M+
Sbjct: 85 TALIDAYSVSGCVSMAREVFDEISSKD-----MVSWTGMIASYAENDCFSEALEFFSQMR 139
Query: 87 AEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDML 146
G +PN T + VL AC LQ GK H + + + + +V GL+++Y RCGD
Sbjct: 140 VAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERDLYVGVGLLELYTRCGDND 199
Query: 147 SALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYV 206
A + F KN+V I W+ MIS +
Sbjct: 200 DAWRAFGDMP-KNDV----------------------------------IPWSFMISRFA 224
Query: 207 DNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDT 266
+ ++A +F + R + P FTF SVL A AD+ SL K IH A+ GL +D
Sbjct: 225 QSGQSEKALEIFCQM-RRAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDV 283
Query: 267 FVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWN----------- 315
FV AL+ Y + + + F+ + + N +WN
Sbjct: 284 FVSNALMACYAKCGCIEQSMELFEALS--------------DRNDVSWNTIIVSYVQLGD 329
Query: 316 ---AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTA 372
A+ LFS ML + T IL AC++LA +E G QVH + Y DV +G A
Sbjct: 330 GERALSLFSNMLRYQVQATEVTYSSILRACATLAALELGLQVHCLTAKTIYGQDVAVGNA 389
Query: 373 LVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPD 432
L+DMYAKCGS+K AR + + D VS NA++ Y+MHG G E I F + + +PD
Sbjct: 390 LIDMYAKCGSIKDARFMFDMLDLRDKVSWNAIICGYSMHGLGVEAIKMFNLMKETKCKPD 449
Query: 433 HISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFI 491
++F+ LSAC + G + G ++F M Y ++P ++HYTCMV L+ R+G L +A +FI
Sbjct: 450 ELTFVGVLSACSNTGRLDEGKQYFTSMKQDYGIEPCMEHYTCMVWLMGRSGNLDQAVKFI 509
Query: 492 KKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWS 551
+ IP P ++W ALLG CV H ++E G+I+A R++ELEP + ++V+L+N++A A RW
Sbjct: 510 EDIPFEPSVMIWRALLGACVIHNDVELGRISAQRVLELEPRDEASHVLLSNIYARARRWG 569
Query: 552 DLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSH 590
++A R+ MK + + K PG SWIE++ +H F +D SH
Sbjct: 570 NVAYVRKHMKRKGVKKEPGLSWIENQGNVHCFTVADTSH 608
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 109/427 (25%), Positives = 182/427 (42%), Gaps = 74/427 (17%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y +CG DDA + F MP+ D + W
Sbjct: 191 LYTRCGDNDDAWRAFGDMPKNDVIPW---------------------------------- 216
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
S +I F Q+G E+A+ + +M+ + PN T SSVL A A ++ L L K HG+
Sbjct: 217 --SFMISRFAQSGQSEKALEIFCQMRRAFVIPNQFTFSSVLQASADIESLDLSKTIHGHA 274
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G ++ FV N L+ Y +CG + ++++F S +N+VS NTIIV Y + G+ A
Sbjct: 275 LKAGLSTDVFVSNALMACYAKCGCIEQSMELFEALSDRNDVSWNTIIVSYVQLGDGERAL 334
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LF M +R ++ T T+ S+L A
Sbjct: 335 SLFSNM------------------------------------LRYQVQATEVTYSSILRA 358
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA + +L G ++H L D VG AL++MY + + A+ FD ++ + +
Sbjct: 359 CATLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVSW 418
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G+ + A+++F+ M PD T +LSACS+ ++ GKQ +
Sbjct: 419 NAIICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGKQYFTSMKQ 478
Query: 361 -CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNAMLTAYAMHGHGKEGI 418
G + + T +V + + G+L A + I P ++ A+L A +H + G
Sbjct: 479 DYGIEPCMEHYTCMVWLMGRSGNLDQAVKFIEDIPFEPSVMIWRALLGACVIHNDVELGR 538
Query: 419 AHFRRIL 425
+R+L
Sbjct: 539 ISAQRVL 545
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 129/261 (49%), Gaps = 5/261 (1%)
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
+FD+M +R +S+ ++I GY ++ + EAF +F L +G E F F +VL
Sbjct: 2 VFDEMP----ERNTVSFVTLIHGYAQSNKFIEAFELFARL-HGEGHELNPFVFTTVLKLL 56
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK 301
M G+ +H + +G S+TF+G AL++ Y + A+ FDEI + + +
Sbjct: 57 VSMEWAELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWT 116
Query: 302 MKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRC 361
+ N A++ FS+M P+ +T +L AC L + GK VH ++
Sbjct: 117 GMIASYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKT 176
Query: 362 GYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHF 421
Y+ D+++G L+++Y +CG A A+ + D++ + M++ +A G ++ + F
Sbjct: 177 NYERDLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIF 236
Query: 422 RRILASGFRPDHISFLSALSA 442
++ + P+ +F S L A
Sbjct: 237 CQMRRAFVIPNQFTFSSVLQA 257
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 107/233 (45%), Gaps = 5/233 (2%)
Query: 287 MAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLS--LDLTPDIYTVGIILSACSS 344
M FDE+ + G+ + A +LF+ + +L P ++T +L S
Sbjct: 1 MVFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTT--VLKLLVS 58
Query: 345 LATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAM 404
+ E G+ VH ++ GY S+ IGTAL+D Y+ G + AR + IS+ D+VS M
Sbjct: 59 MEWAELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGM 118
Query: 405 LTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDV 464
+ +YA + E + F ++ +GF+P++ +F L AC+ + G + +
Sbjct: 119 IASYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNY 178
Query: 465 KPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
+ L +++L +R G+ +A+ +P D + W ++ G E
Sbjct: 179 ERDLYVGVGLLELYTRCGDNDDAWRAFGDMP-KNDVIPWSFMISRFAQSGQSE 230
>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
Length = 710
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 185/547 (33%), Positives = 302/547 (55%), Gaps = 10/547 (1%)
Query: 55 ETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGK 114
+ PNL+ W+ + G + AI + M + GL PN+ T +L +CA+L+ G+
Sbjct: 64 QEPNLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVSKEGQ 123
Query: 115 EFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
+ HG++ + G+ + +V L+ +Y + G A K+F S ++ VS +I GY G
Sbjct: 124 QIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASRG 183
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTF 234
+ A+++FD++ + ++SWN++ISGY D EA +F+++ M+ ++P T
Sbjct: 184 YIESAQKMFDEIP----VKDVVSWNAIISGYADTGNNKEALDLFKEM-MKTNVKPDESTM 238
Query: 235 GSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIEN 294
+V+ ACA S++ G+++H+ GL S+ + AL+++Y + ++ A F + N
Sbjct: 239 VTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSN 298
Query: 295 IENLLGKMKEDGFEP-NVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ 353
+ + G+ N+Y A+ LF EML P+ T+ IL AC+ L ++ G+
Sbjct: 299 KDVISWNTMIGGYTHLNLYK-EALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRW 357
Query: 354 VHAYAIR--CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMH 411
+H Y + G + + T+L+DMYAKCG ++ A + + L + NAM+ +AMH
Sbjct: 358 IHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMH 417
Query: 412 GHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKH 470
G F R+ +G PD I+F+ LSAC H+G + G F M Y + P L+H
Sbjct: 418 GRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRIFRSMTQNYKITPKLEH 477
Query: 471 YTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELE 530
Y CM+DLL G EA E I + M PD V+W +LL C HGN+E G+ A +LI++E
Sbjct: 478 YGCMIDLLGHLGLFKEAEEMINTMTMEPDGVIWCSLLKACKMHGNVELGESFAQKLIKIE 537
Query: 531 PNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSH 590
P N G+YV+L+N++A AGRW+++A R + D+ M K PGCS IE +H+F D+ H
Sbjct: 538 PENPGSYVLLSNIYATAGRWNEVANIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFH 597
Query: 591 DRSEEIY 597
R+ EIY
Sbjct: 598 PRNREIY 604
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 118/433 (27%), Positives = 204/433 (47%), Gaps = 53/433 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G DA KVF RD VS+ +++T A+ G + A + + + D +V
Sbjct: 147 MYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASRGYIESAQKMFDEIPVKD-----VV 201
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A+I G+ G ++EA+ + M ++P+ T+ +V+ ACA+ + LG++ H +I
Sbjct: 202 SWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSACAQSGSIQLGRQVHSWI 261
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+G SN +VN L+D+Y +CG++ +A +F S K+ +S NT+I GY
Sbjct: 262 DDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNKDVISWNTMIGGY---------- 311
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
HL +LY EA +F+++L R G P T S+L A
Sbjct: 312 ------THL-------------------NLYKEALLLFQEML-RSGENPNDVTMLSILPA 345
Query: 241 CADMNSLRKGKEIHAL--AIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
CA + ++ G+ IH G+ + + + +L++MY + D+ AA F+ + +
Sbjct: 346 CAQLGAIDFGRWIHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLS 405
Query: 299 LGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV---- 354
GF + A +FS M + PD T +LSACS ++ G+++
Sbjct: 406 ACNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRIFRSM 465
Query: 355 -HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST-PDLVSQNAMLTAYAMHG 412
Y I + H G ++D+ G K A ++ PD V ++L A MHG
Sbjct: 466 TQNYKITPKLE---HYG-CMIDLLGHLGLFKEAEEMINTMTMEPDGVIWCSLLKACKMHG 521
Query: 413 HGKEGIAHFRRIL 425
+ + G + ++++
Sbjct: 522 NVELGESFAQKLI 534
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 38/191 (19%), Positives = 79/191 (41%), Gaps = 4/191 (2%)
Query: 339 LSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVD---MYAKCGSLKHARLAYKRIST 395
LS + T++ + +HA I+ G + + + L++ + L +A ++ I
Sbjct: 6 LSLLHNCKTLQSLRIIHAQMIKTGLHNTNYALSRLLEFCILSPNFDGLPYAISVFETIQE 65
Query: 396 PDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEF 455
P+L+ N M +A+ I + +++ G P+ +F L +C K G +
Sbjct: 66 PNLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVSKEGQQI 125
Query: 456 FDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
+ + L +T ++ + + G +A++ D V + AL+ G S G
Sbjct: 126 HGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDG-SSHRDVVSYTALITGYASRGY 184
Query: 516 LEFGQIAADRL 526
+E Q D +
Sbjct: 185 IESAQKMFDEI 195
>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 808
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 195/596 (32%), Positives = 319/596 (53%), Gaps = 62/596 (10%)
Query: 55 ETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACA-RLQKLSLG 113
E N W+ ++ + Q+ E+A+ + M + P+ T V+ ACA RL + G
Sbjct: 102 ENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRLLEFG-G 160
Query: 114 KEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCEN 173
KE H ++ + GF S+ +V N L+++Y CG+M A K+F + + + VS N+I+ GY +
Sbjct: 161 KEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKK 220
Query: 174 GNVAEARELFDQMEHLGV---------------------------QRGIISWNSMISGYV 206
G+V EA+ +FDQM + ++ ++SW+++ISGY
Sbjct: 221 GDVEEAKLIFDQMPQRNIVASNSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALISGYE 280
Query: 207 DNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDT 266
N +Y+EA MF ++ +G+ SVL ACA ++ ++ GK IH L I +G++S
Sbjct: 281 QNGMYEEALVMFIEM-NANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYV 339
Query: 267 FVGGALVEMYCRYQDLVAAQMAFDEIENIENLL------GKMKEDGFEP----------- 309
+ AL+ MY +++ AQ F+ N++ + G MK E
Sbjct: 340 NLQNALIHMYSGSGEIMDAQKLFNGSHNLDQISWNSMISGCMKCGSVEKARALFDVMPEK 399
Query: 310 NVYTWNA--------------MQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVH 355
++ +W+A + LF EM + PD + ++SAC+ LA +++GK VH
Sbjct: 400 DIVSWSAVISGYAQHDCFSETLALFHEMQLGQIRPDETILVSVISACTHLAALDQGKWVH 459
Query: 356 AYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGK 415
AY + G +V +GT L+DMY KCG +++A + + + S NA++ A++G +
Sbjct: 460 AYIRKNGLKVNVILGTTLLDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVE 519
Query: 416 EGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGS-EFFDLMAYYDVKPSLKHYTCM 474
+ F + +G P+ I+F+ L AC H G + G F ++ + ++P++KHY CM
Sbjct: 520 RSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCM 579
Query: 475 VDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNT 534
VDLL RAG L EA + I+ +PMAPD WGALLG C HG+ E G+ +LIEL+P++
Sbjct: 580 VDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEMGERVGRKLIELQPDHD 639
Query: 535 GNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSH 590
G +V+L+N+FA G W D+ R MK + + K+PGCS IE +H+F A D++H
Sbjct: 640 GFHVLLSNIFASKGDWEDVLEVRGMMKQQGVVKTPGCSLIEANGVVHEFLAGDKTH 695
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 144/483 (29%), Positives = 230/483 (47%), Gaps = 63/483 (13%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSS--------- 51
MY CG++ DA+K+F P D VSWNS++ G V EA ++M
Sbjct: 185 MYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGDVEEAKLIFDQMPQRNIVASNSM 244
Query: 52 ---------------LDNET--PNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNA 94
L NE ++VSWSA+I G+ QNG EEA+ M M A G+ +
Sbjct: 245 IVLLGKMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDE 304
Query: 95 RTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSK 154
+ SVL ACA L + GK HG + R G S + N L+ +Y G+++ A K+F+
Sbjct: 305 VVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQKLFNG 364
Query: 155 FSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEA 214
+++S N++I G + G+V +AR LFD M ++ I+SW+++ISGY + + E
Sbjct: 365 SHNLDQISWNSMISGCMKCGSVEKARALFDVMP----EKDIVSWSAVISGYAQHDCFSET 420
Query: 215 FSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVE 274
++F ++ + I P SV+ AC + +L +GK +HA GL+ + +G L++
Sbjct: 421 LALFHEMQLGQ-IRPDETILVSVISACTHLAALDQGKWVHAYIRKNGLKVNVILGTTLLD 479
Query: 275 MYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNA--------------MQLF 320
MY M +EN + M+E G V +WNA + +F
Sbjct: 480 MY----------MKCGCVENALEVFNGMEEKG----VSSWNALIIGLAVNGLVERSLDMF 525
Query: 321 SEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI-RCGYDSDVHIGTALVDMYAK 379
SEM + + P+ T +L AC + ++ G+ A I + G + +V +VD+ +
Sbjct: 526 SEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGR 585
Query: 380 CGSLKHA-RLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLS 438
G L A +L PD+ + A+L A HG + G R+++ +PDH F
Sbjct: 586 AGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEMGERVGRKLIE--LQPDHDGFHV 643
Query: 439 ALS 441
LS
Sbjct: 644 LLS 646
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 108/502 (21%), Positives = 192/502 (38%), Gaps = 135/502 (26%)
Query: 114 KEFHGYITR---NGFMSNPFVVNGLVDVYRRCG--DMLSALKIFSKFSIKNEVSCNTIIV 168
K+F+ +++ GF+S+ F + L+ + +L+IF + N NT++
Sbjct: 55 KQFNRILSQMILTGFISDTFAASRLLKFSTDSPFIGLDYSLQIFDRIENSNGFMWNTMMR 114
Query: 169 GYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIE 228
Y ++ + +A L+ L++++ +
Sbjct: 115 AYIQSNSAEKALLLY------------------------------------KLMVKNNVG 138
Query: 229 PTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMA 288
P ++T+ V+ ACA GKEIH + +G SD +V L+ MY ++ A+
Sbjct: 139 PDNYTYPLVVQACAVRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKL 198
Query: 289 FDEIENIEN---------------------------------------LLGKMKE----- 304
FDE +++ LLGKM +
Sbjct: 199 FDESPVLDSVSWNSILAGYVKKGDVEEAKLIFDQMPQRNIVASNSMIVLLGKMGQVMEAW 258
Query: 305 ------------------DGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLA 346
G+E N A+ +F EM + + D V +LSAC+ L+
Sbjct: 259 KLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLS 318
Query: 347 TMERGKQVHAYAIRCGYDSDVHIGTALVDMYA---------------------------- 378
++ GK +H IR G +S V++ AL+ MY+
Sbjct: 319 IVKTGKMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQKLFNGSHNLDQISWNSMIS 378
Query: 379 ---KCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHIS 435
KCGS++ AR + + D+VS +A+++ YA H E +A F + RPD
Sbjct: 379 GCMKCGSVEKARALFDVMPEKDIVSWSAVISGYAQHDCFSETLALFHEMQLGQIRPDETI 438
Query: 436 FLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIP 495
+S +SAC H ++ G + +K ++ T ++D+ + G + A E +
Sbjct: 439 LVSVISACTHLAALDQGKWVHAYIRKNGLKVNVILGTTLLDMYMKCGCVENALEVFNGME 498
Query: 496 MAPDSVMWGALLGGCVSHGNLE 517
S W AL+ G +G +E
Sbjct: 499 EKGVSS-WNALIIGLAVNGLVE 519
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 36/199 (18%), Positives = 86/199 (43%), Gaps = 4/199 (2%)
Query: 330 PDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCG--SLKHAR 387
P I T+ I+ + + +++ ++ + I G+ SD + L+ L ++
Sbjct: 37 PTI-TLSILETHLHNCHNLKQFNRILSQMILTGFISDTFAASRLLKFSTDSPFIGLDYSL 95
Query: 388 LAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAG 447
+ RI + N M+ AY ++ + ++ ++ + PD+ ++ + AC
Sbjct: 96 QIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRL 155
Query: 448 SIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALL 507
G E D + + ++++ + G + +A + + P+ DSV W ++L
Sbjct: 156 LEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVL-DSVSWNSIL 214
Query: 508 GGCVSHGNLEFGQIAADRL 526
G V G++E ++ D++
Sbjct: 215 AGYVKKGDVEEAKLIFDQM 233
>gi|356519224|ref|XP_003528273.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Glycine max]
Length = 805
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 204/686 (29%), Positives = 330/686 (48%), Gaps = 137/686 (19%)
Query: 53 DNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSL 112
D+ +PN+ SW+A+IG T+ G+ EEA+ +MQ +GL P+ L +VL AC L+ +
Sbjct: 113 DSPSPNVFSWAAIIGLHTRTGFCEEALFGYIKMQQDGLPPDNFVLPNVLKACGVLKWVRF 172
Query: 113 GKEFHGYITRN-GFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYC 171
GK H ++ + G +V LVD+Y +CG + A K+F + S +N+V+ N+++V Y
Sbjct: 173 GKGVHAFVVKTIGLKECVYVATSLVDMYGKCGAVEDAGKVFDEMSERNDVTWNSMVVTYA 232
Query: 172 ENGNVAEARELFDQMEHLGVQRGIISW--------------------------------- 198
+NG EA +F +M GV+ +++
Sbjct: 233 QNGMNQEAIRVFREMRLQGVEVTLVALSGFFTACANSEAVGEGRQGHGLAVVGGLELDNV 292
Query: 199 --NSMISGYVDNSLYDEAFSMFRDLLMRD------------------------------G 226
+S+++ Y L +EA +FR++ ++D G
Sbjct: 293 LGSSIMNFYFKVGLIEEAEVVFRNMAVKDVVTWNLVVAGYAQFGMVEKALEMCCVMREEG 352
Query: 227 IEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQ 286
+ T ++L AD L G + HA + + D V +++MY + + A+
Sbjct: 353 LRFDCVTLSALLAVAADTRDLVLGMKAHAYCVKNDFEGDVVVSSGIIDMYAKCGRMDCAR 412
Query: 287 MAFDEIENIE---------------------NLLGKMKEDGFEPNVYTWNAM-------- 317
F + + L +M+ + PNV +WN++
Sbjct: 413 RVFSCVRKKDIVLWNTMLAACAEQGLSGEALKLFFQMQLESVPPNVVSWNSLIFGFFKNG 472
Query: 318 ------QLFSEMLSLDLTPDIYT--------------------------VGI-------- 337
+F+EM S + P++ T VGI
Sbjct: 473 QVAEARNMFAEMCSSGVMPNLITWTTMMSGLVQNGFGSGAMMVFREMQDVGIRPNSMSIT 532
Query: 338 -ILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTP 396
LS C+S+A ++ G+ +H Y +R +HI T+++DMYAKCGSL A+ +K ST
Sbjct: 533 SALSGCTSMALLKHGRAIHGYVMRRDLSQSIHIITSIMDMYAKCGSLDGAKCVFKMCSTK 592
Query: 397 DLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFF 456
+L NAM++AYA HG +E + F+++ G PDHI+ S LSAC H G +K G + F
Sbjct: 593 ELYVYNAMISAYASHGQAREALVLFKQMEKEGIVPDHITLTSVLSACSHGGLMKEGIKVF 652
Query: 457 DLM-AYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
M + +KPS +HY C+V LL+ G+L EA I +P PD+ + G+LL C + +
Sbjct: 653 KYMVSELQMKPSEEHYGCLVKLLANDGQLDEALRTILTMPSHPDAHILGSLLTACGQNND 712
Query: 516 LEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIE 575
+E A L++L+P+N+GNYV L+N++A G+W ++ R MK++ + K PGCSWIE
Sbjct: 713 IELADYIAKWLLKLDPDNSGNYVALSNVYAAVGKWDKVSNLRGLMKEKGLRKIPGCSWIE 772
Query: 576 DRDEIHKFRASDRSHDRSEEIYTIID 601
E+H F ASDRSH ++EEIY +D
Sbjct: 773 VGQELHVFIASDRSHPKTEEIYVTLD 798
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 127/445 (28%), Positives = 190/445 (42%), Gaps = 78/445 (17%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y K G +++A+ VF+ M +D V+WN VV A G+V +ALE
Sbjct: 301 YFKVGLIEEAEVVFRNMAVKDVVTWNLVVAGYAQFGMVEKALE----------------- 343
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
M M+ EGL + TLS++L A + L LG + H Y
Sbjct: 344 -------------------MCCVMREEGLRFDCVTLSALLAVAADTRDLVLGMKAHAYCV 384
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIK----------------------- 158
+N F + V +G++D+Y +CG M A ++FS K
Sbjct: 385 KNDFEGDVVVSSGIIDMYAKCGRMDCARRVFSCVRKKDIVLWNTMLAACAEQGLSGEALK 444
Query: 159 ------------NEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYV 206
N VS N++I G+ +NG VAEAR +F +M GV +I+W +M+SG V
Sbjct: 445 LFFQMQLESVPPNVVSWNSLIFGFFKNGQVAEARNMFAEMCSSGVMPNLITWTTMMSGLV 504
Query: 207 DNSLYDEAFSMFRDLLMRD-GIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSD 265
N A +FR+ M+D GI P S + S L C M L+ G+ IH + L
Sbjct: 505 QNGFGSGAMMVFRE--MQDVGIRPNSMSITSALSGCTSMALLKHGRAIHGYVMRRDLSQS 562
Query: 266 TFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLS 325
+ ++++MY + L A+ F E + + + A+ LF +M
Sbjct: 563 IHIITSIMDMYAKCGSLDGAKCVFKMCSTKELYVYNAMISAYASHGQAREALVLFKQMEK 622
Query: 326 LDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR--CGYDSDVHIGTALVDMYAKCGSL 383
+ PD T+ +LSACS M+ G +V Y + S+ H G LV + A G L
Sbjct: 623 EGIVPDHITLTSVLSACSHGGLMKEGIKVFKYMVSELQMKPSEEHYG-CLVKLLANDGQL 681
Query: 384 KHA-RLAYKRISTPDLVSQNAMLTA 407
A R S PD ++LTA
Sbjct: 682 DEALRTILTMPSHPDAHILGSLLTA 706
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 160/363 (44%), Gaps = 57/363 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG +D A++VF + ++D V WN+++ ACA GL EAL+ +M L++ PN+V
Sbjct: 401 MYAKCGRMDCARRVFSCVRKKDIVLWNTMLAACAEQGLSGEALKLFFQM-QLESVPPNVV 459
Query: 61 SWSAVIGGFTQNGYDEEAIG----------------------------------MLFR-M 85
SW+++I GF +NG EA M+FR M
Sbjct: 460 SWNSLIFGFFKNGQVAEARNMFAEMCSSGVMPNLITWTTMMSGLVQNGFGSGAMMVFREM 519
Query: 86 QAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDM 145
Q G+ PN+ +++S L C + L G+ HGY+ R + ++ ++D+Y +CG +
Sbjct: 520 QDVGIRPNSMSITSALSGCTSMALLKHGRAIHGYVMRRDLSQSIHIITSIMDMYAKCGSL 579
Query: 146 LSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGY 205
A +F S K N +I Y +G EA LF QME G+ I+ S++S
Sbjct: 580 DGAKCVFKMCSTKELYVYNAMISAYASHGQAREALVLFKQMEKEGIVPDHITLTSVLSAC 639
Query: 206 VDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACAD-------------MNSLRKGKE 252
L E +F+ ++ ++P+ +G ++ A+ M S
Sbjct: 640 SHGGLMKEGIKVFKYMVSELQMKPSEEHYGCLVKLLANDGQLDEALRTILTMPSHPDAHI 699
Query: 253 IHALAIALGLQSDTFVGGALVEMYCR--------YQDLVAAQMAFDEIENIENLLGKMKE 304
+ +L A G +D + + + + Y L A + + + NL G MKE
Sbjct: 700 LGSLLTACGQNNDIELADYIAKWLLKLDPDNSGNYVALSNVYAAVGKWDKVSNLRGLMKE 759
Query: 305 DGF 307
G
Sbjct: 760 KGL 762
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 121/550 (22%), Positives = 217/550 (39%), Gaps = 74/550 (13%)
Query: 43 LECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLP 102
+ CL TPN S + ++G EA+ L +M + L ++L
Sbjct: 1 MACLAPSHPPQTLTPNQFSLTH-FSSLCKHGRIREAVNSLTQMHSLNLHVGPAIYGTLLQ 59
Query: 103 ACARLQKLSLGKEFHGYITRNG--FMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNE 160
C + L L + H + + G F N FV++ LV +Y +CG A ++F N
Sbjct: 60 GCVYERALPLALQLHADVIKRGPTFALNDFVISKLVILYAKCGASEPATRLFRDSPSPNV 119
Query: 161 VSCNTIIVGYCENGNVAEARELFDQMEHLGVQR------------GIISWNSMISG---- 204
S II + G EA + +M+ G+ G++ W G
Sbjct: 120 FSWAAIIGLHTRTGFCEEALFGYIKMQQDGLPPDNFVLPNVLKACGVLKWVRFGKGVHAF 179
Query: 205 -----------YVDNSLYD----------------------------------------E 213
YV SL D E
Sbjct: 180 VVKTIGLKECVYVATSLVDMYGKCGAVEDAGKVFDEMSERNDVTWNSMVVTYAQNGMNQE 239
Query: 214 AFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALV 273
A +FR++ ++ G+E T ACA+ ++ +G++ H LA+ GL+ D +G +++
Sbjct: 240 AIRVFREMRLQ-GVEVTLVALSGFFTACANSEAVGEGRQGHGLAVVGGLELDNVLGSSIM 298
Query: 274 EMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIY 333
Y + + A++ F + + + + G+ A+++ M L D
Sbjct: 299 NFYFKVGLIEEAEVVFRNMAVKDVVTWNLVVAGYAQFGMVEKALEMCCVMREEGLRFDCV 358
Query: 334 TVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRI 393
T+ +L+ + + G + HAY ++ ++ DV + + ++DMYAKCG + AR + +
Sbjct: 359 TLSALLAVAADTRDLVLGMKAHAYCVKNDFEGDVVVSSGIIDMYAKCGRMDCARRVFSCV 418
Query: 394 STPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGS 453
D+V N ML A A G E + F ++ P+ +S+ S + G +
Sbjct: 419 RKKDIVLWNTMLAACAEQGLSGEALKLFFQMQLESVPPNVVSWNSLIFGFFKNGQVAEAR 478
Query: 454 EFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEA---YEFIKKIPMAPDSVMWGALLGGC 510
F M V P+L +T M+ L + G A + ++ + + P+S+ + L GC
Sbjct: 479 NMFAEMCSSGVMPNLITWTTMMSGLVQNGFGSGAMMVFREMQDVGIRPNSMSITSALSGC 538
Query: 511 VSHGNLEFGQ 520
S L+ G+
Sbjct: 539 TSMALLKHGR 548
>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
Length = 779
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 193/606 (31%), Positives = 299/606 (49%), Gaps = 76/606 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y +C A VF MP RD +V
Sbjct: 143 LYIRCARFGPAANVFAKMPMRD------------------------------------VV 166
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEG-LEPNARTLSSVLPACARLQKLSLGKEFHGY 119
+W+A++ G+ +G AI L MQ G L PNA TL S+LP A+ L G H Y
Sbjct: 167 AWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAY 226
Query: 120 ITRNGFMSNP---FVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNV 176
R N + L+D+Y +C ++ A ++F +++NEV+
Sbjct: 227 CLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVT-------------- 272
Query: 177 AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGS 236
W+++I G+V EAF++F+D+L+ ++ + S
Sbjct: 273 ---------------------WSALIGGFVLCDRMTEAFNLFKDMLVEGMCFLSATSVAS 311
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
L CA + LR G ++HAL G+ +D G +L+ MY + + A M FDEI +
Sbjct: 312 ALRVCASLADLRMGTQLHALLAKSGIHADLTAGNSLLSMYAKAGLINEATMLFDEIAIKD 371
Query: 297 NLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHA 356
+ G+ N A +F +M + ++ PDI T+ ++ ACS LA ++ G+ H
Sbjct: 372 TISYGALLSGYVQNGKAEEAFLVFKKMQACNVQPDIATMVSLIPACSHLAALQHGRCSHG 431
Query: 357 YAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKE 416
I G + I +L+DMYAKCG + +R + ++ D+VS N M+ Y +HG GKE
Sbjct: 432 SVIIRGLALETSICNSLIDMYAKCGRIDLSRQVFDKMPARDIVSWNTMIAGYGIHGLGKE 491
Query: 417 GIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMV 475
F + GF PD ++F+ ++AC H+G + G +FD M + Y + P ++HY CMV
Sbjct: 492 ATTLFLSMKNQGFEPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMV 551
Query: 476 DLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTG 535
DLL+R G L EAY+FI+ +P+ D +WGALLG C H N++ G+ + + +L P TG
Sbjct: 552 DLLARGGFLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRMIQKLGPEGTG 611
Query: 536 NYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEE 595
N+V+L+N+F+ AGR+ + A R K + KSPGCSWIE +H F D+SH S +
Sbjct: 612 NFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGCSWIEINGSLHAFVGGDQSHPCSPD 671
Query: 596 IYTIID 601
IY +D
Sbjct: 672 IYHELD 677
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 168/363 (46%), Gaps = 39/363 (10%)
Query: 174 GNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFT 233
G +A AR++FD++ + ++N++I Y + A ++R +L + P +T
Sbjct: 47 GQLALARQVFDRIPAPDAR----AYNALIRAYSWRGPFHAAIDLYRSMLYFR-VPPNKYT 101
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
F VL AC+ + L G+ IHA A A+GL +D FV AL+++Y R A
Sbjct: 102 FPFVLKACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPA-------- 153
Query: 294 NIENLLGKMKEDGFEPNVYTWNAM-----------QLFSEMLSLD----LTPDIYTVGII 338
N+ KM +V WNAM + +L + L P+ T+ +
Sbjct: 154 --ANVFAKMPMR----DVVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSL 207
Query: 339 LSACSSLATMERGKQVHAYAIRCGYDSD---VHIGTALVDMYAKCGSLKHARLAYKRIST 395
L + + +G VHAY +R D + V IGTAL+DMYAKC L +A + ++
Sbjct: 208 LPLLAQHGALFQGTSVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTV 267
Query: 396 PDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGF-RPDHISFLSALSACVHAGSIKTGSE 454
+ V+ +A++ + + E F+ +L G S SAL C ++ G++
Sbjct: 268 RNEVTWSALIGGFVLCDRMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQ 327
Query: 455 FFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
L+A + L ++ + ++AG + EA +I + D++ +GALL G V +G
Sbjct: 328 LHALLAKSGIHADLTAGNSLLSMYAKAGLINEATMLFDEIAI-KDTISYGALLSGYVQNG 386
Query: 515 NLE 517
E
Sbjct: 387 KAE 389
>gi|224124974|ref|XP_002319471.1| predicted protein [Populus trichocarpa]
gi|222857847|gb|EEE95394.1| predicted protein [Populus trichocarpa]
Length = 703
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 196/599 (32%), Positives = 317/599 (52%), Gaps = 79/599 (13%)
Query: 10 DAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGF 69
+A+K+F MPER+ +SWN +V+ NG++ EA + ++M N+VSW++++ G+
Sbjct: 65 EAQKLFDKMPERNTISWNGLVSGYVKNGMISEARKVFDKMPE-----RNVVSWTSMVRGY 119
Query: 70 TQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNP 129
Q G +EA + +RM P +S + M
Sbjct: 120 VQEGLIDEAELLFWRM------PEKNVVSWTV------------------------MLGG 149
Query: 130 FVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHL 189
+ +G VD RR DM+ +K+ V+ +I G C G ++EARE+FD+M
Sbjct: 150 LIEDGRVDEARRLFDMIP---------VKDVVASTNMIGGLCSEGRLSEAREIFDEMP-- 198
Query: 190 GVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRK 249
QR +++W SMISGY N+ D A +F + ++ + T+ G R
Sbjct: 199 --QRNVVAWTSMISGYAMNNKVDVARKLFEVMPDKNEVTWTAMLKGYT----------RS 246
Query: 250 GK--EIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDG- 306
G+ E L A+ ++ G ++ + ++ A+ FD++ K K+DG
Sbjct: 247 GRINEAAELFKAMPVKPVAACNG-MIMGFGLNGEVGKARWVFDQM--------KEKDDGT 297
Query: 307 -------FEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
+E + A+ LFS M + P+ ++ ILS C SLA+++ G+QVH+ +
Sbjct: 298 WSALIKIYERKGFELEALALFSLMQREGVRPNFPSIISILSVCGSLASLDHGRQVHSQLV 357
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
R +D D+++ + L+ MY KCG L + + R S+ D+V N+++ YA HG G++ +
Sbjct: 358 RSHFDLDIYVSSVLITMYIKCGDLVTGKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALE 417
Query: 420 HFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMVDLL 478
F + +SG PD I+F+ LSAC + G +K G E F+ M + Y V +HY CMVDLL
Sbjct: 418 VFHEMFSSGAAPDEITFIGVLSACGYTGKVKEGLEIFESMKSKYQVDQKTEHYACMVDLL 477
Query: 479 SRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYV 538
RAG+L EA I+ +P+ D+++WGALL C +H NL+ +IAA +L++LEP++ G Y+
Sbjct: 478 GRAGKLNEAMNLIENMPVEADAIVWGALLSACRTHKNLDLAEIAAKKLLQLEPSSAGPYI 537
Query: 539 MLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFR-ASDRSHDRSEEI 596
+L+NL+A RW D+A R+ M+ R + KSPGCSWIE +++H F SH E I
Sbjct: 538 LLSNLYASQSRWKDVAELRKTMRARNVSKSPGCSWIEVDNKVHMFTGGGSASHPEHEMI 596
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 97/438 (22%), Positives = 170/438 (38%), Gaps = 54/438 (12%)
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
R+ F S+ + + + R G + A IF K S N I+ GY N AEA++
Sbjct: 9 RSYFSSSAAITQCQISYFARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNKRPAEAQK 68
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
LFD+M +R ISWN ++SGYV N + EA +F + R+ + TS G V
Sbjct: 69 LFDKMP----ERNTISWNGLVSGYVKNGMISEARKVFDKMPERNVVSWTSMVRGYVQEGL 124
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK 301
D L + ++ + + V+ R D++ + ++ N++G
Sbjct: 125 IDEAELLFWRMPEKNVVSWTVMLGGLIEDGRVDEARRLFDMIPVK----DVVASTNMIGG 180
Query: 302 MKEDGF------------EPNVYTWNAM-QLFSEMLSLDLTPDIYTVGIILSACSSLATM 348
+ +G + NV W +M ++ +D+ ++ V M
Sbjct: 181 LCSEGRLSEAREIFDEMPQRNVVAWTSMISGYAMNNKVDVARKLFEV------------M 228
Query: 349 ERGKQVHAYAIRCGYDSDVHIGTAL-------VDMYAKC----------GSLKHARLAYK 391
+V A+ GY I A V A C G + AR +
Sbjct: 229 PDKNEVTWTAMLKGYTRSGRINEAAELFKAMPVKPVAACNGMIMGFGLNGEVGKARWVFD 288
Query: 392 RISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKT 451
++ D + +A++ Y G E +A F + G RP+ S +S LS C S+
Sbjct: 289 QMKEKDDGTWSALIKIYERKGFELEALALFSLMQREGVRPNFPSIISILSVCGSLASLDH 348
Query: 452 GSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCV 511
G + + + + ++ + + G+L + + D VMW +++ G
Sbjct: 349 GRQVHSQLVRSHFDLDIYVSSVLITMYIKCGDLVTGKRVFDRFS-SKDIVMWNSIIAGYA 407
Query: 512 SHGNLEFGQIAADRLIEL 529
HG FG+ A + E+
Sbjct: 408 QHG---FGEKALEVFHEM 422
Score = 46.2 bits (108), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG L K+VF +D V WNS++ A +G +ALE M S P+ +
Sbjct: 374 MYIKCGDLVTGKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHEMFS-SGAAPDEI 432
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE 88
++ V+ G +E + + M+++
Sbjct: 433 TFIGVLSACGYTGKVKEGLEIFESMKSK 460
>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 716
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 181/578 (31%), Positives = 313/578 (54%), Gaps = 42/578 (7%)
Query: 14 VFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNG 73
++K+ E + +++ A A G V A + + ++ D +VSW+ ++ + +N
Sbjct: 67 IYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKD-----MVSWTGMVACYAEND 121
Query: 74 YDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVN 133
++++ + M+ G PN T + VL AC L+ S+GK HG + + + + +V
Sbjct: 122 RFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGV 181
Query: 134 GLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQR 193
GL+D+Y + GD L++F + +
Sbjct: 182 GLLDLYTKFGDANDVLRVFEEMP-----------------------------------KH 206
Query: 194 GIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEI 253
+I W+ MIS Y ++ EA +F + R + P FTF SVL +CA + +L+ GK++
Sbjct: 207 DVIPWSFMISRYAQSNQSREAVELFGQM-RRAFVLPNQFTFASVLQSCASIENLQLGKQV 265
Query: 254 HALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYT 313
H + +GL + FV AL+++Y + L + F E+ N + G+ +
Sbjct: 266 HCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPNRNEVTWNTMIVGYVQSGDG 325
Query: 314 WNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTAL 373
A+ L+ ML + T +L AC+SLA ME G Q+H+ +++ YD DV +G AL
Sbjct: 326 DKALSLYKNMLECQVQASEVTYSSVLRACASLAAMELGTQIHSLSLKTIYDKDVVVGNAL 385
Query: 374 VDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDH 433
+DMYAKCGS+K+ARL + +S D +S NAM++ Y+MHG E + F+ + + P+
Sbjct: 386 IDMYAKCGSIKNARLVFDMLSERDEISWNAMISGYSMHGLVGEALKAFQMMQETECVPNK 445
Query: 434 ISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIK 492
++F+S LSAC +AG + G +F M Y ++P ++HYTCMV LL R+G L +A + I+
Sbjct: 446 LTFVSILSACSNAGLLDIGQNYFKSMVQDYGIEPCMEHYTCMVWLLGRSGHLDKAVKLIE 505
Query: 493 KIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSD 552
+IP+ P+ +W ALLG CV H +++ G ++A ++++++P + +V+L+N++A RW+
Sbjct: 506 EIPLEPNVKVWRALLGACVIHNDVDLGIMSAQQILQIDPQDEATHVLLSNIYARTRRWNS 565
Query: 553 LARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSH 590
+A R+ MK++ + K PG SWIE++ +H F D SH
Sbjct: 566 VASVRKFMKNKGVKKEPGLSWIENQGIVHYFSVGDTSH 603
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 108/459 (23%), Positives = 206/459 (44%), Gaps = 41/459 (8%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
N VS+ +I G+ Q+ +E + + R+ EG E N +++L ++ L H
Sbjct: 5 NTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELAYSLH 64
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
I + G SN FV L+D Y CG + SA + F + K+ VS ++ Y EN
Sbjct: 65 ACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAENDRFQ 124
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
++ +LF +M + G P FTF V
Sbjct: 125 DSLQLFAEMRMV------------------------------------GFNPNHFTFAGV 148
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
L AC + + GK +H + + D +VG L+++Y ++ D F+E+ +
Sbjct: 149 LKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGVGLLDLYTKFGDANDVLRVFEEMPKHDV 208
Query: 298 LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAY 357
+ + + + A++LF +M + P+ +T +L +C+S+ ++ GKQVH +
Sbjct: 209 IPWSFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTFASVLQSCASIENLQLGKQVHCH 268
Query: 358 AIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEG 417
++ G D +V + AL+D+YAKCG L ++ + + + V+ N M+ Y G G +
Sbjct: 269 VLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPNRNEVTWNTMIVGYVQSGDGDKA 328
Query: 418 IAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEF--FDLMAYYDVKPSLKHYTCMV 475
++ ++ +L + +++ S L AC +++ G++ L YD + + ++
Sbjct: 329 LSLYKNMLECQVQASEVTYSSVLRACASLAAMELGTQIHSLSLKTIYDKDVVVGN--ALI 386
Query: 476 DLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
D+ ++ G + A + + D + W A++ G HG
Sbjct: 387 DMYAKCGSIKNA-RLVFDMLSERDEISWNAMISGYSMHG 424
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/358 (21%), Positives = 153/358 (42%), Gaps = 37/358 (10%)
Query: 158 KNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSM 217
+N VS T+I GY ++ + E +LF ++
Sbjct: 4 RNTVSFVTLIQGYVQSFQLDEVVDLFSRVH------------------------------ 33
Query: 218 FRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYC 277
R+G E F F ++L + +HA LG +S+ FVG AL++ Y
Sbjct: 34 ------REGHELNPFVFTTILKLLVSVECAELAYSLHACIYKLGHESNAFVGTALIDAYA 87
Query: 278 RYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGI 337
+ +A+ AFD I + + + N +++QLF+EM + P+ +T
Sbjct: 88 VCGSVNSARQAFDAIACKDMVSWTGMVACYAENDRFQDSLQLFAEMRMVGFNPNHFTFAG 147
Query: 338 ILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPD 397
+L AC L GK VH ++ Y+ D+++G L+D+Y K G ++ + D
Sbjct: 148 VLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGVGLLDLYTKFGDANDVLRVFEEMPKHD 207
Query: 398 LVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFD 457
++ + M++ YA +E + F ++ + P+ +F S L +C +++ G +
Sbjct: 208 VIPWSFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTFASVLQSCASIENLQLGKQVHC 267
Query: 458 LMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
+ + ++ ++D+ ++ G L + + ++P + V W ++ G V G+
Sbjct: 268 HVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELP-NRNEVTWNTMIVGYVQSGD 324
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 108/229 (47%), Gaps = 36/229 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KCG LD++ K+F +P R+ V+WN+++
Sbjct: 287 VYAKCGRLDNSMKLFMELPNRNEVTWNTMIV----------------------------- 317
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
G+ Q+G ++A+ + M ++ + T SSVL ACA L + LG + H
Sbjct: 318 -------GYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAMELGTQIHSLS 370
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ + + V N L+D+Y +CG + +A +F S ++E+S N +I GY +G V EA
Sbjct: 371 LKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMISGYSMHGLVGEAL 430
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEP 229
+ F M+ +++ S++S + L D + F+ ++ GIEP
Sbjct: 431 KAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQNYFKSMVQDYGIEP 479
>gi|356503704|ref|XP_003520645.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Glycine max]
Length = 855
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 193/594 (32%), Positives = 311/594 (52%), Gaps = 70/594 (11%)
Query: 24 VSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLF 83
++ N++++ G ++ A + +S+ D L+SW+++I GFTQ GY+ EA+ +
Sbjct: 294 IAQNALISMYTRFGQIVHASDVFTMISTKD-----LISWASMITGFTQLGYEIEALYLFR 348
Query: 84 RMQAEGL-EPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRC 142
M +G +PN SV AC L + G++ HG + G N F L D+Y +
Sbjct: 349 DMFRQGFYQPNEFIFGSVFSACRSLLEPEFGRQIHGMCAKFGLGRNVFAGCSLCDMYAKF 408
Query: 143 GDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMI 202
G + SA++ F + E+ +L +SWN++I
Sbjct: 409 GFLPSAIRAFYQI----------------------ESPDL-------------VSWNAII 433
Query: 203 SGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGL 262
+ + D+ +EA F + M G+ P TF S+L AC ++ +G +IH+ I +GL
Sbjct: 434 AAFSDSGDVNEAIYFFCQM-MHTGLMPDGITFLSLLCACGSPVTINQGTQIHSYIIKIGL 492
Query: 263 QSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAM----- 317
+ V +L+ MY + +L A F ++ NL+ +WNA+
Sbjct: 493 DKEAAVCNSLLTMYTKCSNLHDAFNVFKDVSENANLV-------------SWNAILSACL 539
Query: 318 ---------QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVH 368
+LF ML + PD T+ IL C+ LA++E G QVH ++++ G DV
Sbjct: 540 QHKQAGEVFRLFKLMLFSENKPDNITITTILGTCAELASLEVGNQVHCFSVKSGLVVDVS 599
Query: 369 IGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASG 428
+ L+DMYAKCGSLKHAR + PD+VS ++++ YA G G E + FR + G
Sbjct: 600 VSNRLIDMYAKCGSLKHARDVFGSTQNPDIVSWSSLIVGYAQFGLGHEALNLFRMMKNLG 659
Query: 429 FRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEA 487
+P+ +++L LSAC H G ++ G F++ M + P+ +H +CMVDLL+RAG L EA
Sbjct: 660 VQPNEVTYLGVLSACSHIGLVEEGWHFYNTMEIELGIPPTREHVSCMVDLLARAGCLYEA 719
Query: 488 YEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYA 547
FIKK+ PD MW LL C +HGN++ + AA+ +++L+P+N+ V+L+N+ A
Sbjct: 720 ENFIKKMGFNPDITMWKTLLASCKTHGNVDIAERAAENILKLDPSNSAALVLLSNIHASV 779
Query: 548 GRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
G W ++AR R MK + K PG SWI +D+IH F + D SH + +IYT+++
Sbjct: 780 GNWKEVARLRNLMKQMGVQKVPGQSWIAVKDQIHVFFSEDNSHQQRGDIYTMLE 833
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 147/531 (27%), Positives = 240/531 (45%), Gaps = 105/531 (19%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKCGSL DA+K F M R N+V
Sbjct: 201 MYGKCGSLKDARKAFDTMQLR------------------------------------NVV 224
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ +I G++QNG + +AI M +M G P+ T S++ AC + LG++ HG++
Sbjct: 225 SWTIMISGYSQNGQENDAIIMYIQMLQSGYFPDPLTFGSIIKACCIAGDIDLGRQLHGHV 284
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
++G+ + N L+ +Y R G ++ A +F+ S K+ +S ++I G
Sbjct: 285 IKSGYDHHLIAQNALISMYTRFGQIVHASDVFTMISTKDLISWASMITG----------- 333
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
F Q+ GY +LY +FRD+ + +P F FGSV A
Sbjct: 334 --FTQL-----------------GYEIEALY-----LFRDMFRQGFYQPNEFIFGSVFSA 369
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C + G++IH + GL + F G +L +MY ++ L +A AF +IE+
Sbjct: 370 CRSLLEPEFGRQIHGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAIRAFYQIES------ 423
Query: 301 KMKEDGFEPNVYTWN--------------AMQLFSEMLSLDLTPDIYTVGIILSACSSLA 346
P++ +WN A+ F +M+ L PD T +L AC S
Sbjct: 424 --------PDLVSWNAIIAAFSDSGDVNEAIYFFCQMMHTGLMPDGITFLSLLCACGSPV 475
Query: 347 TMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNAML 405
T+ +G Q+H+Y I+ G D + + +L+ MY KC +L A +K +S +LVS NA+L
Sbjct: 476 TINQGTQIHSYIIKIGLDKEAAVCNSLLTMYTKCSNLHDAFNVFKDVSENANLVSWNAIL 535
Query: 406 TAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEF--FDLMAYYD 463
+A H E F+ +L S +PD+I+ + L C S++ G++ F + +
Sbjct: 536 SACLQHKQAGEVFRLFKLMLFSENKPDNITITTILGTCAELASLEVGNQVHCFSVKSGLV 595
Query: 464 VKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
V S+ + ++D+ ++ G L A + PD V W +L+ G G
Sbjct: 596 VDVSVSNR--LIDMYAKCGSLKHARDVFGST-QNPDIVSWSSLIVGYAQFG 643
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 116/444 (26%), Positives = 195/444 (43%), Gaps = 37/444 (8%)
Query: 71 QNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPF 130
Q Y E F + ++ + T +++ AC ++ L GK+ H +I ++ +
Sbjct: 134 QRHYREALDTFNFHPKNSSIQLESSTYGNLILACTSIRSLKYGKKIHDHILKSNCQPDLV 193
Query: 131 VVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLG 190
+ N ++++Y +CG + A K F ++N VS +I GY +NG +A ++ QM
Sbjct: 194 LQNHILNMYGKCGSLKDARKAFDTMQLRNVVSWTIMISGYSQNGQENDAIIMYIQM---- 249
Query: 191 VQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKG 250
++ G P TFGS++ AC + G
Sbjct: 250 --------------------------------LQSGYFPDPLTFGSIIKACCIAGDIDLG 277
Query: 251 KEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPN 310
+++H I G AL+ MY R+ +V A F I + + GF
Sbjct: 278 RQLHGHVIKSGYDHHLIAQNALISMYTRFGQIVHASDVFTMISTKDLISWASMITGFTQL 337
Query: 311 VYTWNAMQLFSEMLSLDL-TPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHI 369
Y A+ LF +M P+ + G + SAC SL E G+Q+H + G +V
Sbjct: 338 GYEIEALYLFRDMFRQGFYQPNEFIFGSVFSACRSLLEPEFGRQIHGMCAKFGLGRNVFA 397
Query: 370 GTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGF 429
G +L DMYAK G L A A+ +I +PDLVS NA++ A++ G E I F +++ +G
Sbjct: 398 GCSLCDMYAKFGFLPSAIRAFYQIESPDLVSWNAIIAAFSDSGDVNEAIYFFCQMMHTGL 457
Query: 430 RPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYE 489
PD I+FLS L AC +I G++ + + ++ + ++ L +A+
Sbjct: 458 MPDGITFLSLLCACGSPVTINQGTQIHSYIIKIGLDKEAAVCNSLLTMYTKCSNLHDAFN 517
Query: 490 FIKKIPMAPDSVMWGALLGGCVSH 513
K + + V W A+L C+ H
Sbjct: 518 VFKDVSENANLVSWNAILSACLQH 541
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 153/322 (47%), Gaps = 2/322 (0%)
Query: 196 ISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHA 255
+S NS I+ Y EA F I+ S T+G++++AC + SL+ GK+IH
Sbjct: 122 LSTNSYINLMCKQRHYREALDTFNFHPKNSSIQLESSTYGNLILACTSIRSLKYGKKIHD 181
Query: 256 LAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWN 315
+ Q D + ++ MY + L A+ AFD ++ + + G+ N +
Sbjct: 182 HILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQLRNVVSWTIMISGYSQNGQEND 241
Query: 316 AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVD 375
A+ ++ +ML PD T G I+ AC ++ G+Q+H + I+ GYD + AL+
Sbjct: 242 AIIMYIQMLQSGYFPDPLTFGSIIKACCIAGDIDLGRQLHGHVIKSGYDHHLIAQNALIS 301
Query: 376 MYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGF-RPDHI 434
MY + G + HA + IST DL+S +M+T + G+ E + FR + GF +P+
Sbjct: 302 MYTRFGQIVHASDVFTMISTKDLISWASMITGFTQLGYEIEALYLFRDMFRQGFYQPNEF 361
Query: 435 SFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKI 494
F S SAC + G + + A + + ++ + D+ ++ G L A +I
Sbjct: 362 IFGSVFSACRSLLEPEFGRQIHGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAIRAFYQI 421
Query: 495 PMAPDSVMWGALLGGCVSHGNL 516
+PD V W A++ G++
Sbjct: 422 E-SPDLVSWNAIIAAFSDSGDV 442
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 109/231 (47%), Gaps = 37/231 (16%)
Query: 1 MYGKCGSLDDAKKVFKMMPER-DCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNL 59
MY KC +L DA VFK + E + VSWN++++AC + E + M
Sbjct: 505 MYTKCSNLHDAFNVFKDVSENANLVSWNAILSACLQHKQAGEVFRLFKLML--------- 555
Query: 60 VSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
F++N +P+ T++++L CA L L +G + H +
Sbjct: 556 ---------FSEN------------------KPDNITITTILGTCAELASLEVGNQVHCF 588
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
++G + + V N L+D+Y +CG + A +F + VS +++IVGY + G EA
Sbjct: 589 SVKSGLVVDVSVSNRLIDMYAKCGSLKHARDVFGSTQNPDIVSWSSLIVGYAQFGLGHEA 648
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPT 230
LF M++LGVQ +++ ++S L +E + + + + GI PT
Sbjct: 649 LNLFRMMKNLGVQPNEVTYLGVLSACSHIGLVEEGWHFYNTMEIELGIPPT 699
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 106/252 (42%), Gaps = 35/252 (13%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGSL A+ VF D VSW+S++ A GL EAL M +L + PN V
Sbjct: 607 MYAKCGSLKHARDVFGSTQNPDIVSWSSLIVGYAQFGLGHEALNLFRMMKNLGVQ-PNEV 665
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
++ V+ + G EE M+ E G+ P +S ++ AR L E +
Sbjct: 666 TYLGVLSACSHIGLVEEGWHFYNTMEIELGIPPTREHVSCMVDLLARAGCL---YEAENF 722
Query: 120 ITRNGFMSNPFV-----------VNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIV 168
I + GF NP + +G VD+ R + + K N + +
Sbjct: 723 IKKMGF--NPDITMWKTLLASCKTHGNVDIAERAAENI------LKLDPSNSAALVLLSN 774
Query: 169 GYCENGNVAEARELFDQMEHLGVQR----GIISWNSMISGYV--DNSLYD--EAFSMFRD 220
+ GN E L + M+ +GVQ+ I+ I + DNS + ++M D
Sbjct: 775 IHASVGNWKEVARLRNLMKQMGVQKVPGQSWIAVKDQIHVFFSEDNSHQQRGDIYTMLED 834
Query: 221 L---LMRDGIEP 229
L ++ DG +P
Sbjct: 835 LWLQMLDDGYDP 846
>gi|297802258|ref|XP_002869013.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314849|gb|EFH45272.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 693
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 176/521 (33%), Positives = 296/521 (56%), Gaps = 9/521 (1%)
Query: 77 EAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLV 136
EA+ +L R + +P A T +++ C++ + L GK+ H +I +GF+ + N ++
Sbjct: 74 EAVQLLGRAK----KPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRIL 129
Query: 137 DVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGII 196
+Y +CG ++ A K+F + ++ S N ++ GY E G + EAR LFD+M +R
Sbjct: 130 GMYAKCGSLVDARKVFDEMPERDVCSWNVMVNGYAEVGLLEEARNLFDEMP----ERDSY 185
Query: 197 SWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHAL 256
SW +M++GYV +EA ++ + +P FT S + A A + +R+GKEIH
Sbjct: 186 SWTAMVTGYVKKDQPEEALVLYSLMQRVPNSKPNIFTVSSAVAAAAAIKCIRRGKEIHGH 245
Query: 257 AIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNA 316
+ GL SD + +L++MY + + A+ FD+I + + + D + +
Sbjct: 246 IVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIIDKDVVSWTSMIDRYFKSSRWREG 305
Query: 317 MQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDM 376
LFSE++ P+ YT +L+AC+ L T E G+QVH Y R G+D ++L+DM
Sbjct: 306 FSLFSELIGSCERPNEYTFSGVLNACADLTTEELGRQVHGYMTRVGFDPYSFASSSLIDM 365
Query: 377 YAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISF 436
Y KCG+++ AR PDLVS +++ YA +G E + +F +L SG +PDH++F
Sbjct: 366 YTKCGNIESARHVVDGCPKPDLVSLTSLIGGYAQNGKPDEALKYFDLLLKSGTKPDHVTF 425
Query: 437 LSALSACVHAGSIKTGSEFF-DLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIP 495
++ LSAC HAG ++ G EFF + +D+ + HYTC+VDLL+R+G + + ++P
Sbjct: 426 VNVLSACTHAGLVEKGLEFFYSITEKHDLTHTSDHYTCLVDLLARSGRFEQLKSVLSEMP 485
Query: 496 MAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLAR 555
M P +W ++LGGC ++GN++ + AA L ++EP N YV +AN++A AG+W + +
Sbjct: 486 MKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGK 545
Query: 556 TRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEI 596
R++M++ + K PG SW E + + H F A+D SH +I
Sbjct: 546 MRKRMQEIGITKKPGSSWTEIKRKRHVFIAADTSHPMYNQI 586
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 121/397 (30%), Positives = 194/397 (48%), Gaps = 59/397 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGSL DA+KVF MPERD SWN +V A GL+ EA + M D+
Sbjct: 131 MYAKCGSLVDARKVFDEMPERDVCSWNVMVNGYAEVGLLEEARNLFDEMPERDS-----Y 185
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQ-AEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
SW+A++ G+ + EEA+ + MQ +PN T+SS + A A ++ + GKE HG+
Sbjct: 186 SWTAMVTGYVKKDQPEEALVLYSLMQRVPNSKPNIFTVSSAVAAAAAIKCIRRGKEIHGH 245
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
I R G S+ + + L+D+Y +CG + A IF K K+ VS
Sbjct: 246 IVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIIDKDVVS----------------- 288
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
W SMI Y +S + E FS+F +L+ P +TF VL
Sbjct: 289 ------------------WTSMIDRYFKSSRWREGFSLFSELI-GSCERPNEYTFSGVLN 329
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFD-----EIEN 294
ACAD+ + G+++H +G +F +L++MY + ++ +A+ D ++ +
Sbjct: 330 ACADLTTEELGRQVHGYMTRVGFDPYSFASSSLIDMYTKCGNIESARHVVDGCPKPDLVS 389
Query: 295 IENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV 354
+ +L+G ++G +P+ A++ F +L PD T +LSAC+ +E+G +
Sbjct: 390 LTSLIGGYAQNG-KPD----EALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEF 444
Query: 355 HAYAIRCGYD----SDVHIGTALVDMYAKCGSLKHAR 387
Y+I +D SD + T LVD+ A+ G + +
Sbjct: 445 F-YSITEKHDLTHTSDHY--TCLVDLLARSGRFEQLK 478
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 132/298 (44%), Gaps = 43/298 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKCG +D+A+ +F + ++D +V
Sbjct: 264 MYGKCGCIDEARNIFDKIIDKD------------------------------------VV 287
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+++I + ++ E + + PN T S VL ACA L LG++ HGY+
Sbjct: 288 SWTSMIDRYFKSSRWREGFSLFSELIGSCERPNEYTFSGVLNACADLTTEELGRQVHGYM 347
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
TR GF F + L+D+Y +CG++ SA + + VS ++I GY +NG EA
Sbjct: 348 TRVGFDPYSFASSSLIDMYTKCGNIESARHVVDGCPKPDLVSLTSLIGGYAQNGKPDEAL 407
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+ FD + G + +++ +++S L ++ F + + + TS + ++
Sbjct: 408 KYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHDLTHTSDHYTCLVDL 467
Query: 241 CADMNSLRKGK--EIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
A R G+ ++ ++ + ++ F+ +++ Y ++ A+ A E+ IE
Sbjct: 468 LA-----RSGRFEQLKSVLSEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIE 520
>gi|224077710|ref|XP_002305373.1| predicted protein [Populus trichocarpa]
gi|222848337|gb|EEE85884.1| predicted protein [Populus trichocarpa]
Length = 676
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 190/578 (32%), Positives = 297/578 (51%), Gaps = 76/578 (13%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY CG +++A+KVF M E+ ++V
Sbjct: 166 MYMNCGEVEEARKVFDAMKEK------------------------------------SVV 189
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ +I G+ +NG+ A+ + +M G+E + ++ SVLPAC L++L +G+ HG +
Sbjct: 190 SWNTMINGYFKNGFANTALVVFNQMVDSGVEIDGASVVSVLPACGYLKELEVGRRVHGLV 249
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ V N LVD+Y +CG M EAR
Sbjct: 250 EEK-VLGKKIVSNALVDMYAKCGSM-------------------------------DEAR 277
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+FD M V+R ++SW SMI+GY+ N A S+F+ ++ +G+ P S T +L+A
Sbjct: 278 LVFDNM----VERDVVSWTSMINGYILNGDAKSALSLFK-IMQIEGLRPNSVTIALILLA 332
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA +N+L+ G+ +H + L S+ V +L++MY + L + F + +
Sbjct: 333 CASLNNLKDGRCLHGWVMKQRLYSEVAVETSLIDMYAKCNCLGLSFSVFTRTSRKKTVPW 392
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G N A+ LF +ML + + T +L A LA ++ +++Y +R
Sbjct: 393 NALLSGCVHNKLATEAIGLFKKMLMEGVEINAATCNSLLPAYGILADLQPVNNINSYLMR 452
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST--PDLVSQNAMLTAYAMHGHGKEGI 418
G+ S++ + T+L+D+Y+KCGSL+ A + I D+ + ++ Y MHGHG+ +
Sbjct: 453 SGFVSNIQVATSLIDIYSKCGSLESAHKIFNTIPVDVQDIFVWSIIIAGYGMHGHGETAV 512
Query: 419 AHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDL 477
+ F++++ SG +P+ ++F S L +C HAG + G F M + P+ HYTCMVDL
Sbjct: 513 SLFKQMVQSGVKPNDVTFTSVLQSCSHAGMVDDGLYLFKFMLKDHQTIPNDDHYTCMVDL 572
Query: 478 LSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNY 537
L RAG + EAY+ IK +P P +WGALLG CV H N+E G++AA L ELEP NTGNY
Sbjct: 573 LGRAGRMDEAYDLIKTMPFMPGHAVWGALLGACVMHENVELGEVAARWLFELEPGNTGNY 632
Query: 538 VMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIE 575
V+LA L+A GRW D RQ+M D + K+P S IE
Sbjct: 633 VLLAKLYAALGRWEDAENVRQRMDDIGLRKAPAHSLIE 670
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/422 (24%), Positives = 190/422 (45%), Gaps = 38/422 (9%)
Query: 90 LEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSAL 149
L P S+L Q L+ K+ H ++ +G +S +D+
Sbjct: 17 LAPKTTQYQSLLKHYGAAQSLTSTKQLHAHLITSGLLS--------IDIR---------- 58
Query: 150 KIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNS 209
+ ++ Y G V AR+LFD++ QRG + +N MI Y+
Sbjct: 59 --------------SVLVATYAHCGYVHNARKLFDELR----QRGTLLYNFMIKMYIAKG 100
Query: 210 LYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVG 269
Y EA +F ++L P ++T+ V+ AC+++ + G+ +H L + S FV
Sbjct: 101 DYFEAMKVFLEMLGSKDCCPDNYTYPFVIKACSELLLVEYGRVLHGLTLVSKFGSHLFVL 160
Query: 270 GALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLT 329
+L+ MY ++ A+ FD ++ + +G+ N + A+ +F++M+ +
Sbjct: 161 NSLLAMYMNCGEVEEARKVFDAMKEKSVVSWNTMINGYFKNGFANTALVVFNQMVDSGVE 220
Query: 330 PDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLA 389
D +V +L AC L +E G++VH + + ALVDMYAKCGS+ ARL
Sbjct: 221 IDGASVVSVLPACGYLKELEVGRRVHGLVEEKVLGKKI-VSNALVDMYAKCGSMDEARLV 279
Query: 390 YKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSI 449
+ + D+VS +M+ Y ++G K ++ F+ + G RP+ ++ L AC ++
Sbjct: 280 FDNMVERDVVSWTSMINGYILNGDAKSALSLFKIMQIEGLRPNSVTIALILLACASLNNL 339
Query: 450 KTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
K G + + + T ++D+ ++ LG ++ + +V W ALL G
Sbjct: 340 KDGRCLHGWVMKQRLYSEVAVETSLIDMYAKCNCLGLSFSVFTRTS-RKKTVPWNALLSG 398
Query: 510 CV 511
CV
Sbjct: 399 CV 400
>gi|357507131|ref|XP_003623854.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498869|gb|AES80072.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 865
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 194/581 (33%), Positives = 294/581 (50%), Gaps = 72/581 (12%)
Query: 57 PNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEF 116
P+ + S +I T +G EAI + +Q G++P+ + ACA KE
Sbjct: 127 PDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAAKACAVSGDALRVKEV 186
Query: 117 HGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNV 176
H TR G MS+ FV N L+ Y +C C G
Sbjct: 187 HDDATRCGVMSDVFVGNALIHAYGKCK---------------------------CVEG-- 217
Query: 177 AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGS 236
AR +FD + V R ++SW S+ S YV + +FR++ G++P T S
Sbjct: 218 --ARRVFDDL----VVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGW-SGVKPNPMTVSS 270
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFD------ 290
+L ACA++ L+ GKEIH A+ G+ + FV ALV +Y + + A+M FD
Sbjct: 271 ILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRD 330
Query: 291 ---------------EIENIENLLGKMKEDGFEPNVYTWNAM--------------QLFS 321
E E +L KM DG + TWNA+ ++F
Sbjct: 331 VVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFR 390
Query: 322 EMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCG 381
+M + P+ T+ IL ACS + GK++H Y R D+ TAL+ MYAKCG
Sbjct: 391 KMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCG 450
Query: 382 SLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALS 441
L +R + + D+V+ N M+ A AMHG+GKE + F ++L S +P+ ++F LS
Sbjct: 451 DLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLS 510
Query: 442 ACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDS 500
C H+ ++ G + F+ M + V+P HY+C+VD+ SRAG L EAY+FI+ +PM P +
Sbjct: 511 GCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTA 570
Query: 501 VMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKM 560
WGALL C + N+E +I+A +L E+EPNN GNYV L N+ A WS+ ++ R M
Sbjct: 571 SAWGALLAACRVYKNVELAKISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRILM 630
Query: 561 KDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
K+R + K+PGCSW++ +++H F D+S+ S++IY +D
Sbjct: 631 KERGITKTPGCSWLQVGNKVHTFVVGDKSNIESDKIYNFLD 671
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 120/394 (30%), Positives = 186/394 (47%), Gaps = 54/394 (13%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
YGKC ++ A++VF + RD VSW S +++C ++C
Sbjct: 209 YGKCKCVEGARRVFDDLVVRDVVSWTS-LSSC--------YVKC---------------- 243
Query: 62 WSAVIGGFTQNGYDEEAIGMLFR-MQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
GF + G D +FR M G++PN T+SS+LPACA L+ L GKE HG+
Sbjct: 244 ------GFPRKGMD------VFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFA 291
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R+G + N FV + LV +Y +C + A +F ++ VS N ++ Y +N +
Sbjct: 292 VRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGF 351
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LF +M GV+ +WN++I G ++N +EA MFR + + G +P T S+L A
Sbjct: 352 SLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRK-MQKMGFKPNEITISSILPA 410
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE------- 293
C+ +LR GKEIH D AL+ MY + DL ++ FD +
Sbjct: 411 CSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAW 470
Query: 294 NIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ 353
N + M +G E A+ LF +ML + P+ T +LS CS +E G Q
Sbjct: 471 NTMIIANAMHGNGKE-------ALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQ 523
Query: 354 VHAYAIRCG-YDSDVHIGTALVDMYAKCGSLKHA 386
+ R + D + + +VD+Y++ G L A
Sbjct: 524 IFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEA 557
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 104/366 (28%), Positives = 184/366 (50%), Gaps = 26/366 (7%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KC S+ +A+ VF +MP RD VSWN V+TA N + +MS D +
Sbjct: 309 LYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSR-DGVRADEA 367
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+AVIGG +NG EEA+ M +MQ G +PN T+SS+LPAC+ + L +GKE H Y+
Sbjct: 368 TWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYV 427
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R+ + + L+ +Y +CGD+ + +F K+ V+ NT+I+ +GN EA
Sbjct: 428 FRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEAL 487
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LFD+M VQ +++ ++SG + L +E +F + +EP + + V+
Sbjct: 488 FLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVV-- 545
Query: 241 CADMNSLRKGK--EIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
D+ S R G+ E + + ++ GAL+ Y+++ A+++ ++ I
Sbjct: 546 --DIYS-RAGRLNEAYKFIQGMPMEPTASAWGALLAACRVYKNVELAKISAKKLFEI--- 599
Query: 299 LGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIIL-----SACSSLATMERGKQ 353
EPN N + LF+ +++ + + V I++ + + ++ G +
Sbjct: 600 ---------EPN-NPGNYVSLFNILVTAKMWSEASQVRILMKERGITKTPGCSWLQVGNK 649
Query: 354 VHAYAI 359
VH + +
Sbjct: 650 VHTFVV 655
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 39/90 (43%)
Query: 368 HIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILAS 427
H+G L+ + G AR + I PD + + +++A HG E I + +
Sbjct: 99 HLGLRLIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQER 158
Query: 428 GFRPDHISFLSALSACVHAGSIKTGSEFFD 457
G +PD FL+A AC +G E D
Sbjct: 159 GIKPDMPVFLAAAKACAVSGDALRVKEVHD 188
>gi|297738890|emb|CBI28135.3| unnamed protein product [Vitis vinifera]
Length = 1974
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 203/671 (30%), Positives = 331/671 (49%), Gaps = 143/671 (21%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKCG L+DA+KVF M E+ N+V
Sbjct: 1321 MYGKCGVLEDARKVFDSMVEK------------------------------------NVV 1344
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+++I G+ QNG ++EAI + + M+ EG+EP T++S L A A L L GK+ H
Sbjct: 1345 TWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVASFLSASANLDALIEGKQGH--- 1401
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
A+ I + + N + ++II Y + G + +A
Sbjct: 1402 ---------------------------AIAILNSLDLDN-ILGSSIINFYSKVGLIEDAE 1433
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+F +M +++ +++WN +IS YV + +A +M L+ + + S T S+L A
Sbjct: 1434 LVFSRM----LEKDVVTWNLLISSYVQHHQVGKALNMCH-LMRSENLRFDSVTLSSILSA 1488
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCR---------------------Y 279
A ++++ GKE H I L+SD V ++++MY + +
Sbjct: 1489 SAVTSNIKLGKEGHCYCIRRNLESDVVVANSIIDMYAKCERIDDARKVFDSTTERDLVLW 1548
Query: 280 QDLVAA---------------QMAFD--------------------EIENIENLLGKMKE 304
L+AA QM FD ++ +++ +M+
Sbjct: 1549 NTLLAAYAQVGLSGEALKLFYQMQFDSVPPNVISWNSVILGFLRNGQVNEAKDMFSQMQS 1608
Query: 305 DGFEPNVYTWN--------------AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMER 350
GF+PN+ TW A+ F +M + P I ++ +L AC+ + ++
Sbjct: 1609 LGFQPNLITWTTLISGLAQSGFGYEAILFFQKMQEAGIRPSIASITSVLLACTDIPSLWY 1668
Query: 351 GKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAM 410
G+ +H + R + V + T+LVDMYAKCGS+ A+ + +S+ +L NAM++AYA+
Sbjct: 1669 GRAIHGFITRHEFCLSVPVATSLVDMYAKCGSIDEAKKVFHMMSSKELPIYNAMISAYAL 1728
Query: 411 HGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFF-DLMAYYDVKPSLK 469
HG E +A F+ + G PD I+F S LSAC HAG + G F D+++ +++ P ++
Sbjct: 1729 HGQAVEALALFKHLQKEGIEPDSITFTSILSACSHAGLVNEGLNLFADMVSKHNMNPIME 1788
Query: 470 HYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIEL 529
HY C+V LLSR G L EA I +P PD+ + G+LL C H +E G+ + L +L
Sbjct: 1789 HYGCVVSLLSRCGNLDEALRLILTMPFQPDAHILGSLLTACREHHEIELGEYLSKHLFKL 1848
Query: 530 EPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRS 589
EP+N+GNYV L+N +A AGRW +++ R MK R + K+PGCSWI+ +++ F A D S
Sbjct: 1849 EPSNSGNYVALSNAYAAAGRWVEVSNMRDLMKVRGLRKNPGCSWIQTGGKLNVFVAGDGS 1908
Query: 590 HDRSEEIYTII 600
H ++EEIY ++
Sbjct: 1909 HPKTEEIYAML 1919
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 141/480 (29%), Positives = 228/480 (47%), Gaps = 67/480 (13%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
N+ SW+A++G + G+ E+A+ MQ G+ P+ L +VL AC LQ + LGK H
Sbjct: 1241 NVFSWAAIVGLQCRMGFSEDALLGFIEMQENGVFPDNFVLPNVLKACGSLQLIGLGKGVH 1300
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
GY+ + GF + FV + LVD+Y +CG + A K+F KN V+ N++IVGY +NG
Sbjct: 1301 GYVLKMGFGACVFVSSSLVDMYGKCGVLEDARKVFDSMVEKNVVTWNSMIVGYVQNG--- 1357
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
L EA +F D+ + +GIEPT T S
Sbjct: 1358 --------------------------------LNQEAIDVFYDMRV-EGIEPTRVTVASF 1384
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
L A A++++L +GK+ HA+AI L D +G +++ Y + + A++ F +
Sbjct: 1385 LSASANLDALIEGKQGHAIAILNSLDLDNILGSSIINFYSKVGLIEDAELVFSRM----- 1439
Query: 298 LLGKMKEDGFEPNVYTWN--------------AMQLFSEMLSLDLTPDIYTVGIILSACS 343
E +V TWN A+ + M S +L D T+ ILSA +
Sbjct: 1440 ---------LEKDVVTWNLLISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSSILSASA 1490
Query: 344 SLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNA 403
+ ++ GK+ H Y IR +SDV + +++DMYAKC + AR + + DLV N
Sbjct: 1491 VTSNIKLGKEGHCYCIRRNLESDVVVANSIIDMYAKCERIDDARKVFDSTTERDLVLWNT 1550
Query: 404 MLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYD 463
+L AYA G E + F ++ P+ IS+ S + + G + + F M
Sbjct: 1551 LLAAYAQVGLSGEALKLFYQMQFDSVPPNVISWNSVILGFLRNGQVNEAKDMFSQMQSLG 1610
Query: 464 VKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMA---PDSVMWGALLGGCVSHGNLEFGQ 520
+P+L +T ++ L+++G EA F +K+ A P ++L C +L +G+
Sbjct: 1611 FQPNLITWTTLISGLAQSGFGYEAILFFQKMQEAGIRPSIASITSVLLACTDIPSLWYGR 1670
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 107/465 (23%), Positives = 192/465 (41%), Gaps = 67/465 (14%)
Query: 66 IGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNG- 124
I ++G+ +E++ +L M+ E + +L C + L G++ H I +NG
Sbjct: 1146 ISSLCKDGHLQESVHLLSEMEFEDFQIGPEIYGELLQGCVYERALHTGQQIHARILKNGD 1205
Query: 125 -FMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELF 183
F N +V LV Y +C A+++F + ++N S I+ C G +A F
Sbjct: 1206 FFAKNEYVETKLVVFYAKCDFPEVAVRLFHRLRVRNVFSWAAIVGLQCRMGFSEDALLGF 1265
Query: 184 DQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACAD 243
+M+ +G+ P +F +VL AC
Sbjct: 1266 IEMQ------------------------------------ENGVFPDNFVLPNVLKACGS 1289
Query: 244 MNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMK 303
+ + GK +H + +G + FV +LV+MY + L A+ FD +
Sbjct: 1290 LQLIGLGKGVHGYVLKMGFGACVFVSSSLVDMYGKCGVLEDARKVFDSM----------- 1338
Query: 304 EDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSSLATME 349
E NV TWN+M +F +M + P TV LSA ++L +
Sbjct: 1339 ---VEKNVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVASFLSASANLDALI 1395
Query: 350 RGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYA 409
GKQ HA AI D D +G+++++ Y+K G ++ A L + R+ D+V+ N ++++Y
Sbjct: 1396 EGKQGHAIAILNSLDLDNILGSSIINFYSKVGLIEDAELVFSRMLEKDVVTWNLLISSYV 1455
Query: 410 MHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLK 469
H + + + + R D ++ S LSA +IK G E +++ +
Sbjct: 1456 QHHQVGKALNMCHLMRSENLRFDSVTLSSILSASAVTSNIKLGKEGHCYCIRRNLESDVV 1515
Query: 470 HYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
++D+ ++ + +A + D V+W LL G
Sbjct: 1516 VANSIIDMYAKCERIDDARKVFDST-TERDLVLWNTLLAAYAQVG 1559
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 98/223 (43%), Gaps = 9/223 (4%)
Query: 316 AMQLFSEMLSLDLT--PDIYTVGIILSACSSLATMERGKQVHAYAIRCG--YDSDVHIGT 371
++ L SEM D P+IY G +L C + G+Q+HA ++ G + + ++ T
Sbjct: 1158 SVHLLSEMEFEDFQIGPEIY--GELLQGCVYERALHTGQQIHARILKNGDFFAKNEYVET 1215
Query: 372 ALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRP 431
LV YAKC + A + R+ ++ S A++ G ++ + F + +G P
Sbjct: 1216 KLVVFYAKCDFPEVAVRLFHRLRVRNVFSWAAIVGLQCRMGFSEDALLGFIEMQENGVFP 1275
Query: 432 DHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFI 491
D+ + L AC I G + + + +VD+ + G L +A +
Sbjct: 1276 DNFVLPNVLKACGSLQLIGLGKGVHGYVLKMGFGACVFVSSSLVDMYGKCGVLEDARKVF 1335
Query: 492 KKIPMAPDSVMWGALLGGCVSHG-NLEFGQIAADRLIE-LEPN 532
+ + + V W +++ G V +G N E + D +E +EP
Sbjct: 1336 DSM-VEKNVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPT 1377
>gi|124360227|gb|ABN08240.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 687
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 194/581 (33%), Positives = 294/581 (50%), Gaps = 72/581 (12%)
Query: 57 PNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEF 116
P+ + S +I T +G EAI + +Q G++P+ + ACA KE
Sbjct: 41 PDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAAKACAVSGDALRVKEV 100
Query: 117 HGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNV 176
H TR G MS+ FV N L+ Y +C C G
Sbjct: 101 HDDATRCGVMSDVFVGNALIHAYGKCK---------------------------CVEG-- 131
Query: 177 AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGS 236
AR +FD + V R ++SW S+ S YV + +FR++ G++P T S
Sbjct: 132 --ARRVFDDL----VVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGW-SGVKPNPMTVSS 184
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFD------ 290
+L ACA++ L+ GKEIH A+ G+ + FV ALV +Y + + A+M FD
Sbjct: 185 ILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRD 244
Query: 291 ---------------EIENIENLLGKMKEDGFEPNVYTWNAM--------------QLFS 321
E E +L KM DG + TWNA+ ++F
Sbjct: 245 VVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFR 304
Query: 322 EMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCG 381
+M + P+ T+ IL ACS + GK++H Y R D+ TAL+ MYAKCG
Sbjct: 305 KMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCG 364
Query: 382 SLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALS 441
L +R + + D+V+ N M+ A AMHG+GKE + F ++L S +P+ ++F LS
Sbjct: 365 DLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLS 424
Query: 442 ACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDS 500
C H+ ++ G + F+ M + V+P HY+C+VD+ SRAG L EAY+FI+ +PM P +
Sbjct: 425 GCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTA 484
Query: 501 VMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKM 560
WGALL C + N+E +I+A +L E+EPNN GNYV L N+ A WS+ ++ R M
Sbjct: 485 SAWGALLAACRVYKNVELAKISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRILM 544
Query: 561 KDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
K+R + K+PGCSW++ +++H F D+S+ S++IY +D
Sbjct: 545 KERGITKTPGCSWLQVGNKVHTFVVGDKSNIESDKIYNFLD 585
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 120/394 (30%), Positives = 186/394 (47%), Gaps = 54/394 (13%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
YGKC ++ A++VF + RD VSW S +++C ++C
Sbjct: 123 YGKCKCVEGARRVFDDLVVRDVVSWTS-LSSC--------YVKC---------------- 157
Query: 62 WSAVIGGFTQNGYDEEAIGMLFR-MQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
GF + G D +FR M G++PN T+SS+LPACA L+ L GKE HG+
Sbjct: 158 ------GFPRKGMD------VFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFA 205
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R+G + N FV + LV +Y +C + A +F ++ VS N ++ Y +N +
Sbjct: 206 VRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGF 265
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LF +M GV+ +WN++I G ++N +EA MFR + + G +P T S+L A
Sbjct: 266 SLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRK-MQKMGFKPNEITISSILPA 324
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE------- 293
C+ +LR GKEIH D AL+ MY + DL ++ FD +
Sbjct: 325 CSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAW 384
Query: 294 NIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ 353
N + M +G E A+ LF +ML + P+ T +LS CS +E G Q
Sbjct: 385 NTMIIANAMHGNGKE-------ALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQ 437
Query: 354 VHAYAIRCG-YDSDVHIGTALVDMYAKCGSLKHA 386
+ R + D + + +VD+Y++ G L A
Sbjct: 438 IFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEA 471
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 104/366 (28%), Positives = 184/366 (50%), Gaps = 26/366 (7%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KC S+ +A+ VF +MP RD VSWN V+TA N + +MS D +
Sbjct: 223 LYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSR-DGVRADEA 281
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+AVIGG +NG EEA+ M +MQ G +PN T+SS+LPAC+ + L +GKE H Y+
Sbjct: 282 TWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYV 341
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R+ + + L+ +Y +CGD+ + +F K+ V+ NT+I+ +GN EA
Sbjct: 342 FRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEAL 401
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LFD+M VQ +++ ++SG + L +E +F + +EP + + V+
Sbjct: 402 FLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVV-- 459
Query: 241 CADMNSLRKGK--EIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
D+ S R G+ E + + ++ GAL+ Y+++ A+++ ++ I
Sbjct: 460 --DIYS-RAGRLNEAYKFIQGMPMEPTASAWGALLAACRVYKNVELAKISAKKLFEI--- 513
Query: 299 LGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIIL-----SACSSLATMERGKQ 353
EPN N + LF+ +++ + + V I++ + + ++ G +
Sbjct: 514 ---------EPN-NPGNYVSLFNILVTAKMWSEASQVRILMKERGITKTPGCSWLQVGNK 563
Query: 354 VHAYAI 359
VH + +
Sbjct: 564 VHTFVV 569
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 39/90 (43%)
Query: 368 HIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILAS 427
H+G L+ + G AR + I PD + + +++A HG E I + +
Sbjct: 13 HLGLRLIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQER 72
Query: 428 GFRPDHISFLSALSACVHAGSIKTGSEFFD 457
G +PD FL+A AC +G E D
Sbjct: 73 GIKPDMPVFLAAAKACAVSGDALRVKEVHD 102
>gi|356551789|ref|XP_003544256.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 758
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 183/608 (30%), Positives = 314/608 (51%), Gaps = 84/608 (13%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KCG+++DA++VF M R N+V
Sbjct: 111 VYAKCGNMEDARRVFDNMLRR------------------------------------NVV 134
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+ ++ GF QN + AI + M G P+ TLS+VL AC+ LQ L LG +FH YI
Sbjct: 135 AWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSVYTLSAVLHACSSLQSLKLGDQFHAYI 194
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ + V + L +Y +CG + ALK FS+ KN
Sbjct: 195 IKYHVDFDASVGSALCSLYSKCGRLEDALKTFSRIREKN--------------------- 233
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+ISW S +S DN + +F +++ D I+P FT S L
Sbjct: 234 --------------VISWTSAVSACADNGAPVKGLRLFVEMIAVD-IKPNEFTLTSALSQ 278
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL-- 298
C ++ SL G ++++L I G +S+ V +L+ +Y + +V A F+ +++ +
Sbjct: 279 CCEILSLELGTQVYSLCIKFGYESNLRVRNSLLYLYLKSGCIVEAHRLFNRMDDASMVTW 338
Query: 299 ---------LGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATME 349
+ ++ +D A++LFS++ + PD++T+ +LS CS + +E
Sbjct: 339 NAMIAGHAQMMELTKDNLSACHRGSEALKLFSKLNLSGMKPDLFTLSSVLSVCSRMLAIE 398
Query: 350 RGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYA 409
+G+Q+HA I+ G+ SDV + T+L+ MY+KCGS++ A A+ +ST +++ +M+T ++
Sbjct: 399 QGEQIHAQTIKTGFLSDVIVSTSLISMYSKCGSIERASKAFLEMSTRTMIAWTSMITGFS 458
Query: 410 MHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSL 468
HG ++ + F + +G RP+ ++F+ LSAC HAG + +F++M Y +KP++
Sbjct: 459 QHGMSQQALHIFEDMSLAGVRPNAVTFVGVLSACSHAGMVSQALNYFEIMQKKYKIKPAM 518
Query: 469 KHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIE 528
HY CMVD+ R G L +A FIKK+ P +W + GC SHGNLE G AA++L+
Sbjct: 519 DHYECMVDMFVRLGRLEQALNFIKKMNYEPSEFIWSNFIAGCKSHGNLELGFYAAEQLLS 578
Query: 529 LEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDR 588
L+P + YV+L N++ A R+ D++R R+ M++ ++ K SWI +D+++ F+ + +
Sbjct: 579 LKPKDPETYVLLLNMYLSAERFEDVSRVRKMMEEEKVGKLKDWSWISIKDKVYSFKTNGK 638
Query: 589 SHDRSEEI 596
+H +S I
Sbjct: 639 THPQSSLI 646
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 112/451 (24%), Positives = 194/451 (43%), Gaps = 98/451 (21%)
Query: 100 VLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKN 159
+L C + S + HG++ + G N FV++ LV+VY +CG+M A ++F +N
Sbjct: 73 LLQQCLDTRSYSETQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFDNMLRRN 132
Query: 160 EVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFR 219
V+ T++VG+ +N A +F +M
Sbjct: 133 VVAWTTLMVGFVQNSQPKHAIHVFQEM--------------------------------- 159
Query: 220 DLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRY 279
+ G P+ +T +VL AC+ + SL+ G + HA I + D VG AL +Y +
Sbjct: 160 ---LYAGSYPSVYTLSAVLHACSSLQSLKLGDQFHAYIIKYHVDFDASVGSALCSLYSKC 216
Query: 280 QDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNA--------------MQLFSEMLS 325
L A F I E NV +W + ++LF EM++
Sbjct: 217 GRLEDALKTFSRIR--------------EKNVISWTSAVSACADNGAPVKGLRLFVEMIA 262
Query: 326 LDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKH 385
+D+ P+ +T+ LS C + ++E G QV++ I+ GY+S++ + +L+ +Y K G +
Sbjct: 263 VDIKPNEFTLTSALSQCCEILSLELGTQVYSLCIKFGYESNLRVRNSLLYLYLKSGCIVE 322
Query: 386 ARLAYKRISTPDLVSQNAMLTAYAMH-----------GHGKEGIAHFRRILASGFRPDHI 434
A + R+ +V+ NAM+ +A G E + F ++ SG +PD
Sbjct: 323 AHRLFNRMDDASMVTWNAMIAGHAQMMELTKDNLSACHRGSEALKLFSKLNLSGMKPDLF 382
Query: 435 SFLSALSAC-----------VHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGE 483
+ S LS C +HA +IKTG F DV S T ++ + S+ G
Sbjct: 383 TLSSVLSVCSRMLAIEQGEQIHAQTIKTG--FLS-----DVIVS----TSLISMYSKCGS 431
Query: 484 LGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
+ A + ++ + W +++ G HG
Sbjct: 432 IERASKAFLEMS-TRTMIAWTSMITGFSQHG 461
>gi|449465795|ref|XP_004150613.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
Length = 603
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 175/556 (31%), Positives = 295/556 (53%), Gaps = 76/556 (13%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
N+ +++A+I GF NG + +M+ EG+ P+ T V+ C + ++ K+ H
Sbjct: 77 NVFAYNAIISGFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCVVRTCCEVMEV---KKIH 133
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
G + + G + FV + LV+ Y + G M A K+F + SI
Sbjct: 134 GCLLKMGLELDVFVGSALVNTYLKNGSMEDAQKVFGELSI-------------------- 173
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
R ++ WN+MI+GY DEA +FR + ++ G+ P+ FT +
Sbjct: 174 ---------------RDVVLWNAMINGYAKIGCLDEALEVFRRMHVK-GVAPSRFTITGI 217
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
L A L GK +H + + +G S V AL++MY + + + A + F+ I
Sbjct: 218 LSVFASRGDLDNGKTVHGIVMKMGYDSGVSVSNALIDMYGKCKHIGDALIIFEMIN---- 273
Query: 298 LLGKMKEDGFEPNVYTWNA--------------MQLFSEMLSLDLTPDIYTVGIILSACS 343
E ++++WN+ ++LF +ML + PD+ T+ +L ACS
Sbjct: 274 ----------EKDIFSWNSIISVHEQCGDHDGTLRLFDKMLGSGILPDLVTITTVLPACS 323
Query: 344 SLATMERGKQVHAYAIRCGYDSD--------VHIGTALVDMYAKCGSLKHARLAYKRIST 395
LA + G+++H Y I G D + + A++DMYAKCGS+ +A + +S
Sbjct: 324 HLAALMHGREIHGYMIINGLGKDDENGAVDNLLVSNAVMDMYAKCGSMNNALKIFDSMSK 383
Query: 396 PDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEF 455
D+ S N M+ Y MHG+ E + F ++ + F+P+ ++ + LSAC HAG + G F
Sbjct: 384 KDVASWNIMIMGYGMHGYALEALGMFSQMCEAEFKPNEVTLVGVLSACNHAGFVSHGRLF 443
Query: 456 FDLM-AYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
M + + V P+++HYTC++D+L RAG L +AYE ++K+P+ + V+W ALLG C HG
Sbjct: 444 LAQMESTFGVIPTIEHYTCVIDMLGRAGHLEDAYEIVQKMPIQANPVVWRALLGACRLHG 503
Query: 515 NLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWI 574
N E +IAA ++++LEP + G+YV+++N++ GR+ ++ R+ MK++ + K+PGCSWI
Sbjct: 504 NAELAEIAARQVLQLEPEHCGSYVLMSNVYGVIGRYEEVLEVRKTMKEQNVKKTPGCSWI 563
Query: 575 EDRDEIHKFRASDRSH 590
E +D +H FR DR+H
Sbjct: 564 ELKDGVHVFRTGDRTH 579
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 110/442 (24%), Positives = 178/442 (40%), Gaps = 84/442 (19%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y K GS++DA+KVF + RD V WN+++ A G + EALE
Sbjct: 155 YLKNGSMEDAQKVFGELSIRDVVLWNAMINGYAKIGCLDEALEVFR-------------- 200
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
RM +G+ P+ T++ +L A L GK HG +
Sbjct: 201 ----------------------RMHVKGVAPSRFTITGILSVFASRGDLDNGKTVHGIVM 238
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
+ G+ S V N L+D+Y +C + AL IF + K+ S N+II + + G+
Sbjct: 239 KMGYDSGVSVSNALIDMYGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQCGDHDGTLR 298
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
LFD+M + GI P T +VL AC
Sbjct: 299 LFDKM------------------------------------LGSGILPDLVTITTVLPAC 322
Query: 242 ADMNSLRKGKEIHALAIALGLQSD--------TFVGGALVEMYCRYQDLVAAQMAFDEIE 293
+ + +L G+EIH I GL D V A+++MY + + A FD +
Sbjct: 323 SHLAALMHGREIHGYMIINGLGKDDENGAVDNLLVSNAVMDMYAKCGSMNNALKIFDSMS 382
Query: 294 NIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ 353
+ + G+ + Y A+ +FS+M + P+ T+ +LSAC+ + G+
Sbjct: 383 KKDVASWNIMIMGYGMHGYALEALGMFSQMCEAEFKPNEVTLVGVLSACNHAGFVSHGRL 442
Query: 354 VHAYAIRC-GYDSDVHIGTALVDMYAKCGSLKHA-RLAYKRISTPDLVSQNAMLTAYAMH 411
A G + T ++DM + G L+ A + K + V A+L A +H
Sbjct: 443 FLAQMESTFGVIPTIEHYTCVIDMLGRAGHLEDAYEIVQKMPIQANPVVWRALLGACRLH 502
Query: 412 GHGKEGIAHFRRILASGFRPDH 433
G+ + R++L P+H
Sbjct: 503 GNAELAEIAARQVLQ--LEPEH 522
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 92/194 (47%), Gaps = 44/194 (22%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKC + DA +F+M+ E+D SWNS+++
Sbjct: 255 MYGKCKHIGDALIIFEMINEKDIFSWNSIISV---------------------------- 286
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
Q G + + + +M G+ P+ T+++VLPAC+ L L G+E HGY+
Sbjct: 287 --------HEQCGDHDGTLRLFDKMLGSGILPDLVTITTVLPACSHLAALMHGREIHGYM 338
Query: 121 TRNGF--------MSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCE 172
NG + N V N ++D+Y +CG M +ALKIF S K+ S N +I+GY
Sbjct: 339 IINGLGKDDENGAVDNLLVSNAVMDMYAKCGSMNNALKIFDSMSKKDVASWNIMIMGYGM 398
Query: 173 NGNVAEARELFDQM 186
+G EA +F QM
Sbjct: 399 HGYALEALGMFSQM 412
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 120/273 (43%), Gaps = 5/273 (1%)
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
+ L +CAD +L KGK++H+L I G +L+ MY + + A + F + +
Sbjct: 16 AFLQSCADHQNLNKGKQLHSLMITYGFSPSPPSITSLINMYSKCGQMGEAILVFYDPCHE 75
Query: 296 ENLLG-KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV 354
N+ GF N Q + +M + PD YT ++ C + + K++
Sbjct: 76 RNVFAYNAIISGFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCVVRTCCEVMEV---KKI 132
Query: 355 HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHG 414
H ++ G + DV +G+ALV+ Y K GS++ A+ + +S D+V NAM+ YA G
Sbjct: 133 HGCLLKMGLELDVFVGSALVNTYLKNGSMEDAQKVFGELSIRDVVLWNAMINGYAKIGCL 192
Query: 415 KEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCM 474
E + FRR+ G P + LS G + G ++ + +
Sbjct: 193 DEALEVFRRMHVKGVAPSRFTITGILSVFASRGDLDNGKTVHGIVMKMGYDSGVSVSNAL 252
Query: 475 VDLLSRAGELGEAYEFIKKIPMAPDSVMWGALL 507
+D+ + +G+A + I D W +++
Sbjct: 253 IDMYGKCKHIGDALIIFEMIN-EKDIFSWNSII 284
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 82/188 (43%), Gaps = 21/188 (11%)
Query: 339 LSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLA-YKRISTPD 397
L +C+ + +GKQ+H+ I G+ T+L++MY+KCG + A L Y +
Sbjct: 18 LQSCADHQNLNKGKQLHSLMITYGFSPSPPSITSLINMYSKCGQMGEAILVFYDPCHERN 77
Query: 398 LVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSAC--------VHAGSI 449
+ + NA+++ + +G +G ++++ G PD +F + C +H +
Sbjct: 78 VFAYNAIISGFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCVVRTCCEVMEVKKIHGCLL 137
Query: 450 KTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
K G E + V LK+ + M D GEL D V+W A++ G
Sbjct: 138 KMGLELDVFVGSALVNTYLKNGS-MEDAQKVFGELS-----------IRDVVLWNAMING 185
Query: 510 CVSHGNLE 517
G L+
Sbjct: 186 YAKIGCLD 193
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 65/147 (44%), Gaps = 9/147 (6%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGS+++A K+F M ++D SWN ++ +G LEAL +M + + PN V
Sbjct: 364 MYAKCGSMNNALKIFDSMSKKDVASWNIMIMGYGMHGYALEALGMFSQMCEAEFK-PNEV 422
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE---GLEPNARTLSSVLPACARLQKLSLGKEFH 117
+ V+ G+ G LF Q E G+ P + V+ R L E
Sbjct: 423 TLVGVLSACNHAGFVSH--GRLFLAQMESTFGVIPTIEHYTCVIDMLGRAGHLEDAYEI- 479
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGD 144
+ + +NP V L+ R G+
Sbjct: 480 --VQKMPIQANPVVWRALLGACRLHGN 504
>gi|307136183|gb|ADN34022.1| hypothetical protein [Cucumis melo subsp. melo]
Length = 773
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 189/597 (31%), Positives = 315/597 (52%), Gaps = 58/597 (9%)
Query: 57 PNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEF 116
P ++W +VI +T +G +++G M A GL P+ SVL ACA L L+LG+
Sbjct: 71 PPALAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNVFPSVLKACAMLMDLNLGESL 130
Query: 117 HGYITRNGFMSNPFVVNGLVDVY------RRCG-DMLSALKIFSKFSIKNE-VSCNTIIV 168
HGYI R G + + N L+++Y ++ G L A ++ + + + V +++V
Sbjct: 131 HGYIIRVGLDFDLYTGNALMNMYSKLRFLKKSGRQRLGASQVLDEMTERTRSVRTASVLV 190
Query: 169 G----------------YCEN----GNVAE----ARELFDQME--HLGVQ---------- 192
G C + V E R + +ME +LG Q
Sbjct: 191 GNQGRKVSDIEAFNYDVSCRSREFEAQVLEIDYKPRSEYREMEACNLGQQIKDISHSMSV 250
Query: 193 ------------RGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+ ++SWN++I+G N LY E +M R++ + ++P SFT SVL
Sbjct: 251 DSVRKIFEMMPEKDLVSWNTIIAGNARNGLYGETLTMVREMGGAN-LKPDSFTLSSVLPL 309
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
A+ + KGKEIH +I GL ++ +V +L++MY + +V + F + + +
Sbjct: 310 IAENVDISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERDGISW 369
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G N ++ F +ML + P Y+ I+ AC+ L T+ GKQ+H Y R
Sbjct: 370 NSIIAGCVQNGLFDEGLKFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITR 429
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
G+D ++ I ++LVDMYAKCG+++ AR + R+ D+VS AM+ A+HGH + I
Sbjct: 430 NGFDENIFIASSLVDMYAKCGNIRTARQIFDRMRLRDMVSWTAMIMGCALHGHALDAIEL 489
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLS 479
F ++ G P++++F++ L+AC HAG + ++F+ M + + P ++HY + DLL
Sbjct: 490 FEQMKTEGIEPNYVAFMAVLTACSHAGLVDEAWKYFNSMTLDFGIAPGVEHYAAVSDLLG 549
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
RAG L EAY+FI +P+ P +W LL C H N++ + A+R++E++P NTG Y++
Sbjct: 550 RAGRLEEAYDFICGMPIGPTGSVWATLLSACRVHKNVDMAEKVANRILEVDPKNTGAYIL 609
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEI 596
LAN+++ A RW + A+ R ++ + K+P CSWIE R++++ F A D SH E+I
Sbjct: 610 LANIYSAARRWKEAAKWRASLRRTGIRKTPACSWIEVRNKVYAFMAGDESHPCYEKI 666
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 171/381 (44%), Gaps = 73/381 (19%)
Query: 7 SLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVI 66
S+D +K+F+MMPE+D LVSW+ +I
Sbjct: 249 SVDSVRKIFEMMPEKD------------------------------------LVSWNTII 272
Query: 67 GGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFM 126
G +NG E + M+ M L+P++ TLSSVLP A +S GKE HG R G
Sbjct: 273 AGNARNGLYGETLTMVREMGGANLKPDSFTLSSVLPLIAENVDISKGKEIHGCSIRQGLD 332
Query: 127 SNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQM 186
+ +V + L+D+Y +C ++ + ++F+ + ++ +S N+II G +NG
Sbjct: 333 AEVYVASSLIDMYAKCTRVVDSYRVFTLLTERDGISWNSIIAGCVQNG------------ 380
Query: 187 EHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNS 246
L+DE FR +LM I+P S++F S++ ACA + +
Sbjct: 381 -----------------------LFDEGLKFFRQMLMAK-IKPKSYSFSSIMPACAHLTT 416
Query: 247 LRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDG 306
L GK++H G + F+ +LV+MY + ++ A+ FD + + + G
Sbjct: 417 LHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTARQIFDRMRLRDMVSWTAMIMG 476
Query: 307 FEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG-KQVHAYAIRCGYDS 365
+ + +A++LF +M + + P+ +L+ACS ++ K ++ + G
Sbjct: 477 CALHGHALDAIELFEQMKTEGIEPNYVAFMAVLTACSHAGLVDEAWKYFNSMTLDFGIAP 536
Query: 366 DVHIGTALVDMYAKCGSLKHA 386
V A+ D+ + G L+ A
Sbjct: 537 GVEHYAAVSDLLGRAGRLEEA 557
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 127/237 (53%), Gaps = 36/237 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC + D+ +VF ++ ERD +SWNS++ C NGL E L+ +M
Sbjct: 344 MYAKCTRVVDSYRVFTLLTERDGISWNSIIAGCVQNGLFDEGLKFFRQM----------- 392
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+ A+ ++P + + SS++PACA L L LGK+ HGYI
Sbjct: 393 ------------------------LMAK-IKPKSYSFSSIMPACAHLTTLHLGKQLHGYI 427
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
TRNGF N F+ + LVD+Y +CG++ +A +IF + +++ VS +I+G +G+ +A
Sbjct: 428 TRNGFDENIFIASSLVDMYAKCGNIRTARQIFDRMRLRDMVSWTAMIMGCALHGHALDAI 487
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
ELF+QM+ G++ +++ ++++ L DEA+ F + + GI P + +V
Sbjct: 488 ELFEQMKTEGIEPNYVAFMAVLTACSHAGLVDEAWKYFNSMTLDFGIAPGVEHYAAV 544
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 61/117 (52%), Gaps = 2/117 (1%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG++ A+++F M RD VSW +++ CA +G L+A+E E+M + E PN V
Sbjct: 445 MYAKCGNIRTARQIFDRMRLRDMVSWTAMIMGCALHGHALDAIELFEQMKTEGIE-PNYV 503
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEF 116
++ AV+ + G +EA M + G+ P ++V R +L +F
Sbjct: 504 AFMAVLTACSHAGLVDEAWKYFNSMTLDFGIAPGVEHYAAVSDLLGRAGRLEEAYDF 560
>gi|359476777|ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330 [Vitis vinifera]
Length = 1008
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 181/575 (31%), Positives = 312/575 (54%), Gaps = 24/575 (4%)
Query: 46 LERMSSLDNETP--NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPA 103
LE+ + E P ++ SW+ +I GF + G + +G+ +MQ +G+ PN TLS VL +
Sbjct: 337 LEQAHKMFEEIPQTDVFSWTVLISGFARIGLSADVLGLFTKMQDQGVCPNQFTLSIVLKS 396
Query: 104 CA-RLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVS 162
C+ + +GK HG+I RNG + + N ++D Y +C A K+F + K+ VS
Sbjct: 397 CSSNVNDSRIGKGIHGWILRNGLDLDAVLNNSILDYYVKCRCFGYAEKLFGLMAEKDTVS 456
Query: 163 CNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLL 222
N ++ Y + G++ ++ +LF Q+ + SWN+MI G + N A + ++
Sbjct: 457 WNIMMSSYLQIGDMQKSVDLFRQLP----GKDAASWNTMIDGLMRNGCERVALELLYKMV 512
Query: 223 MRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDL 282
G TF L+ + ++ L GK+IH + +G+ D FV +L++MYC+ ++
Sbjct: 513 AA-GPAFNKLTFSIALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLIDMYCKCGEM 571
Query: 283 VAAQMAFDEIEN---------------IENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLD 327
A + F + +E++ G+ N +A++ FS M+
Sbjct: 572 EKASVIFKHLPQESSMMNSEESCDDAVVESVSWSSMVSGYVQNGRFEDALKTFSFMICSQ 631
Query: 328 LTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHAR 387
+ D +T+ ++SAC+S +E G+QVH Y + G+ DV +G++++DMY KCGSL A
Sbjct: 632 VEVDKFTLTSVVSACASAGVLELGRQVHGYIQKIGHGLDVFLGSSIIDMYVKCGSLNDAW 691
Query: 388 LAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAG 447
L + + ++V +M++ A+HG G+E + F ++ G P+ +SF+ L+AC HAG
Sbjct: 692 LIFNQAKDRNVVLWTSMISGCALHGQGREAVRLFELMINEGITPNEVSFVGVLTACSHAG 751
Query: 448 SIKTGSEFFDLM-AYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGAL 506
++ G ++F LM Y ++P +H+TCMVDL RAG L E EFI ++ S +W +
Sbjct: 752 LLEEGCKYFRLMREVYGIRPGAEHFTCMVDLYGRAGRLNEIKEFIHNNAISKLSSVWRSF 811
Query: 507 LGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMH 566
L C H N+E G +L+ELEP + G Y++ +++ A RW + A+ R M+ R +
Sbjct: 812 LSSCRVHKNIEMGIWVCKKLLELEPFDAGPYILFSSICATEHRWEEAAKIRSLMQQRGVK 871
Query: 567 KSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
K+P SWI+ ++++H F DRSH + +IY+ +D
Sbjct: 872 KNPSQSWIQLKNQVHSFVMGDRSHPQDTKIYSYLD 906
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/295 (21%), Positives = 120/295 (40%), Gaps = 46/295 (15%)
Query: 269 GGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDL 328
G L+ +Y + Q+L A F+EI + + GF + + + LF++M +
Sbjct: 324 GNHLLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFARIGLSADVLGLFTKMQDQGV 383
Query: 329 TPDIYTVGIILSACSSLATMER-GKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHAR 387
P+ +T+ I+L +CSS R GK +H + +R G D D + +++D Y KC +A
Sbjct: 384 CPNQFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLDAVLNNSILDYYVKCRCFGYAE 443
Query: 388 LAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFR------------------------- 422
+ ++ D VS N M+++Y G ++ + FR
Sbjct: 444 KLFGLMAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNGCERV 503
Query: 423 ------RILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVD 476
+++A+G + ++F AL + G + + V ++D
Sbjct: 504 ALELLYKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLID 563
Query: 477 LLSRAGELGEAYEFIKKIPM--------------APDSVMWGALLGGCVSHGNLE 517
+ + GE+ +A K +P +SV W +++ G V +G E
Sbjct: 564 MYCKCGEMEKASVIFKHLPQESSMMNSEESCDDAVVESVSWSSMVSGYVQNGRFE 618
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 62/118 (52%), Gaps = 4/118 (3%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGSL+DA +F +R+ V W S+++ CA +G EA+ E M + + TPN V
Sbjct: 680 MYVKCGSLNDAWLIFNQAKDRNVVLWTSMISGCALHGQGREAVRLFELMIN-EGITPNEV 738
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE--GLEPNARTLSSVLPACARLQKLSLGKEF 116
S+ V+ + G EE FR+ E G+ P A + ++ R +L+ KEF
Sbjct: 739 SFVGVLTACSHAGLLEEGCKY-FRLMREVYGIRPGAEHFTCMVDLYGRAGRLNEIKEF 795
>gi|356528519|ref|XP_003532850.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Glycine max]
Length = 849
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 192/636 (30%), Positives = 332/636 (52%), Gaps = 74/636 (11%)
Query: 2 YGKCGSLDDAKKVFKMM------PERDCVSWNSVVTACA--------------------- 34
Y K G + + K+F M P+R +S SV++AC+
Sbjct: 230 YAKLGRSEVSLKLFNQMREGDVYPDRYVIS--SVLSACSMLEFLEGGKQIHGYVLRRGFD 287
Query: 35 -----ANGLVLEALEC--LERMSSLDNET--PNLVSWSAVIGGFTQNGYDEEAIGMLFRM 85
NG++ L+C ++ L N ++VSW+ +I G QN + +A+ + M
Sbjct: 288 MDVSVVNGIIDFYLKCHKVKTGRKLFNRLVDKDVVSWTTMIAGCMQNSFHGDAMDLFVEM 347
Query: 86 QAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDM 145
+G +P+A +SVL +C LQ L G++ H Y + ++ FV NGL+D+Y +C +
Sbjct: 348 VRKGWKPDAFGCTSVLNSCGSLQALQKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSL 407
Query: 146 LSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGY 205
+A K+F + N ++S+N+MI GY
Sbjct: 408 TNARKVFDLVAAIN-----------------------------------VVSYNAMIEGY 432
Query: 206 VDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSD 265
EA +FR++ + PT TF S+L + + L +IH L I G+ D
Sbjct: 433 SRQDKLVEALDLFREMRLSLS-PPTLLTFVSLLGLSSSLFLLELSSQIHCLIIKFGVSLD 491
Query: 266 TFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLS 325
+F G AL+++Y + + A++ F+EI + + ++ G+ + +++L+ ++
Sbjct: 492 SFAGSALIDVYSKCSCVGDARLVFEEIYDRDIVVWNAMFSGYSQQLENEESLKLYKDLQM 551
Query: 326 LDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKH 385
L P+ +T +++A S++A++ G+Q H I+ G D D + +LVDMYAKCGS++
Sbjct: 552 SRLKPNEFTFAAVIAAASNIASLRHGQQFHNQVIKMGLDDDPFVTNSLVDMYAKCGSIEE 611
Query: 386 ARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVH 445
+ A+ + D+ N+M++ YA HG + + F R++ G +P++++F+ LSAC H
Sbjct: 612 SHKAFSSTNQRDIACWNSMISTYAQHGDAAKALEVFERMIMEGVKPNYVTFVGLLSACSH 671
Query: 446 AGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGA 505
AG + G F+ M+ + ++P + HY CMV LL RAG++ EA EF+KK+P+ P +V+W +
Sbjct: 672 AGLLDLGFHHFESMSKFGIEPGIDHYACMVSLLGRAGKIYEAKEFVKKMPIKPAAVVWRS 731
Query: 506 LLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRM 565
LL C G++E G AA+ I +P ++G+Y++L+N+FA G W+ + R+KM R+
Sbjct: 732 LLSACRVSGHVELGTYAAEMAISCDPADSGSYILLSNIFASKGMWASVRMVREKMDMSRV 791
Query: 566 HKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
K PG SWIE +E+H+F A D +H S I ++D
Sbjct: 792 VKEPGWSWIEVNNEVHRFIARDTAHRDSTLISLVLD 827
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 135/510 (26%), Positives = 229/510 (44%), Gaps = 76/510 (14%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y K DA+K+F MP R NLV+
Sbjct: 97 YSKMNLQSDAQKLFDTMPHR------------------------------------NLVT 120
Query: 62 WSAVIGGFTQNGYDEEAIGMLFR-MQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
WS+++ +TQ+GY EA+ + R M++ +PN L+SV+ AC +L LS + HG++
Sbjct: 121 WSSMVSMYTQHGYSVEALLLFCRFMRSCSEKPNEYILASVVRACTQLGNLSQALQLHGFV 180
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ GF+ + +V L+D Y + G + A IF +K V+ II GY + G +
Sbjct: 181 VKGGFVQDVYVGTSLIDFYAKRGYVDEARLIFDGLKVKTTVTWTAIIAGYAKLGRSEVSL 240
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDG-IEPTSFTFGSVLI 239
+LF+Q MR+G + P + SVL
Sbjct: 241 KLFNQ-------------------------------------MREGDVYPDRYVISSVLS 263
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
AC+ + L GK+IH + G D V +++ Y + + + F+ + + + +
Sbjct: 264 ACSMLEFLEGGKQIHGYVLRRGFDMDVSVVNGIIDFYLKCHKVKTGRKLFNRLVDKDVVS 323
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
G N + +AM LF EM+ PD + +L++C SL +++G+QVHAYAI
Sbjct: 324 WTTMIAGCMQNSFHGDAMDLFVEMVRKGWKPDAFGCTSVLNSCGSLQALQKGRQVHAYAI 383
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
+ D+D + L+DMYAKC SL +AR + ++ ++VS NAM+ Y+ E +
Sbjct: 384 KVNIDNDDFVKNGLIDMYAKCDSLTNARKVFDLVAAINVVSYNAMIEGYSRQDKLVEALD 443
Query: 420 HFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLS 479
FR + S P ++F+S L ++ S+ L+ + V + ++D+ S
Sbjct: 444 LFREMRLSLSPPTLLTFVSLLGLSSSLFLLELSSQIHCLIIKFGVSLDSFAGSALIDVYS 503
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
+ +G+A ++I D V+W A+ G
Sbjct: 504 KCSCVGDARLVFEEI-YDRDIVVWNAMFSG 532
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 95/376 (25%), Positives = 177/376 (47%), Gaps = 45/376 (11%)
Query: 164 NTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLM 223
NT++ Y + ++A++LFD M H R +++W+SM+S Y + EA +F +
Sbjct: 91 NTLLHAYSKMNLQSDAQKLFDTMPH----RNLVTWSSMVSMYTQHGYSVEALLLFCRFMR 146
Query: 224 RDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLV 283
+P + SV+ AC + +L + ++H + G D +VG +L++ Y + +
Sbjct: 147 SCSEKPNEYILASVVRACTQLGNLSQALQLHGFVVKGGFVQDVYVGTSLIDFYAKRGYVD 206
Query: 284 AAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACS 343
A++ FD ++ + G+ + +++LF++M D+ PD Y + +LSACS
Sbjct: 207 EARLIFDGLKVKTTVTWTAIIAGYAKLGRSEVSLKLFNQMREGDVYPDRYVISSVLSACS 266
Query: 344 SLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNA 403
L +E GKQ+H Y +R G+D DV + ++D Y KC +K R + R+ D+VS
Sbjct: 267 MLEFLEGGKQIHGYVLRRGFDMDVSVVNGIIDFYLKCHKVKTGRKLFNRLVDKDVVSWTT 326
Query: 404 MLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSAC-----------VHAGSIKT- 451
M+ + + + F ++ G++PD S L++C VHA +IK
Sbjct: 327 MIAGCMQNSFHGDAMDLFVEMVRKGWKPDAFGCTSVLNSCGSLQALQKGRQVHAYAIKVN 386
Query: 452 -----------------------GSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAY 488
+ FDL+A +V Y M++ SR +L EA
Sbjct: 387 IDNDDFVKNGLIDMYAKCDSLTNARKVFDLVAAINVVS----YNAMIEGYSRQDKLVEAL 442
Query: 489 EFIK--KIPMAPDSVM 502
+ + ++ ++P +++
Sbjct: 443 DLFREMRLSLSPPTLL 458
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 100/419 (23%), Positives = 176/419 (42%), Gaps = 75/419 (17%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC SL +A+KVF ++ + VS+N+++ + ++EAL+
Sbjct: 400 MYAKCDSLTNARKVFDLVAAINVVSYNAMIEGYSRQDKLVEALD---------------- 443
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFR-MQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
LFR M+ P T S+L + L L L + H
Sbjct: 444 ---------------------LFREMRLSLSPPTLLTFVSLLGLSSSLFLLELSSQIHCL 482
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
I + G + F + L+DVY +C SC V +A
Sbjct: 483 IIKFGVSLDSFAGSALIDVYSKC-------------------SC------------VGDA 511
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
R +F+++ R I+ WN+M SGY +E+ +++DL M ++P FTF +V+
Sbjct: 512 RLVFEEI----YDRDIVVWNAMFSGYSQQLENEESLKLYKDLQM-SRLKPNEFTFAAVIA 566
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
A +++ SLR G++ H I +GL D FV +LV+MY + + + AF +
Sbjct: 567 AASNIASLRHGQQFHNQVIKMGLDDDPFVTNSLVDMYAKCGSIEESHKAFSSTNQRDIAC 626
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
+ + A+++F M+ + P+ T +LSACS ++ G
Sbjct: 627 WNSMISTYAQHGDAAKALEVFERMIMEGVKPNYVTFVGLLSACSHAGLLDLGFHHFESMS 686
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST-PDLVSQNAMLTAYAMHGHGKEG 417
+ G + + +V + + G + A+ K++ P V ++L+A + GH + G
Sbjct: 687 KFGIEPGIDHYACMVSLLGRAGKIYEAKEFVKKMPIKPAAVVWRSLLSACRVSGHVELG 745
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 129/283 (45%), Gaps = 10/283 (3%)
Query: 251 KEIHALAIALGL-QSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEP 309
K+IHA + LG Q D F+ L+ Y + AQ FD + + + +
Sbjct: 71 KKIHAHIVVLGFHQHDVFLVNTLLHAYSKMNLQSDAQKLFDTMPHRNLVTWSSMVSMYTQ 130
Query: 310 NVYTWNAMQLFSE-MLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVH 368
+ Y+ A+ LF M S P+ Y + ++ AC+ L + + Q+H + ++ G+ DV+
Sbjct: 131 HGYSVEALLLFCRFMRSCSEKPNEYILASVVRACTQLGNLSQALQLHGFVVKGGFVQDVY 190
Query: 369 IGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASG 428
+GT+L+D YAK G + ARL + + V+ A++ YA G + + F ++
Sbjct: 191 VGTSLIDFYAKRGYVDEARLIFDGLKVKTTVTWTAIIAGYAKLGRSEVSLKLFNQMREGD 250
Query: 429 FRPDHISFLSALSACVHAGSIKTGSEF--FDLMAYYDVKPSLKHYTCMVDLLSRAGELGE 486
PD S LSAC ++ G + + L +D+ S+ ++D + ++
Sbjct: 251 VYPDRYVISSVLSACSMLEFLEGGKQIHGYVLRRGFDMDVSV--VNGIIDFYLKCHKVKT 308
Query: 487 AYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIEL 529
+ ++ + D V W ++ GC+ + F A D +E+
Sbjct: 309 GRKLFNRL-VDKDVVSWTTMIAGCMQNS---FHGDAMDLFVEM 347
>gi|225456755|ref|XP_002268980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74600,
chloroplastic [Vitis vinifera]
gi|297733984|emb|CBI15231.3| unnamed protein product [Vitis vinifera]
Length = 893
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 201/639 (31%), Positives = 311/639 (48%), Gaps = 106/639 (16%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWN--------------------------------- 27
+Y KC +D A K F MP R+ VSW
Sbjct: 292 LYAKCRDMDQAVKEFLRMPIRNVVSWTTIISGFVQKDDSISAFHFFKEMRKVGEKINNYT 351
Query: 28 --SVVTACAANGLVLEALEC-------------------------------LERMSSLDN 54
SV+TAC ++ EA++ ER+
Sbjct: 352 ITSVLTACTEPVMIKEAVQLHSWIFKTGFYLDSNVSSALINMYSKIGVVDLSERVFREME 411
Query: 55 ETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGK 114
T NL W+ +I F Q+G A+ + RM EGL P+ SSVL + + LSLG+
Sbjct: 412 STKNLAMWAVMISAFAQSGSTGRAVELFQRMLQEGLRPDKFCSSSVL---SIIDSLSLGR 468
Query: 115 EFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
H YI + G ++ V + L +Y +CG +
Sbjct: 469 LIHCYILKIGLFTDISVGSSLFTMYSKCGSL----------------------------- 499
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTF 234
E+ +F+QM + +SW SMI+G+ ++ ++A +FR++L+ + I P T
Sbjct: 500 --EESYTVFEQMP----DKDNVSWASMITGFSEHDHAEQAVQLFREMLLEE-IRPDQMTL 552
Query: 235 GSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIEN 294
+ L AC+ ++SL KGKE+H A+ + + VGGALV MY + +V A+ FD +
Sbjct: 553 TAALTACSALHSLEKGKEVHGYALRARVGKEVLVGGALVNMYSKCGAIVLARRVFDMLPQ 612
Query: 295 IENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV 354
+ G+ N Y +A+ LF E+ DL D +TV ++ A + L +++ G Q+
Sbjct: 613 KDQFSCSSLVSGYAQNGYIEDALLLFHEIRMADLWIDSFTVSSVIGAVAILNSLDIGTQL 672
Query: 355 HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHG 414
HA + G +++V +G++LV MY+KCGS+ +++I PDL+S AM+ +YA HG G
Sbjct: 673 HACVTKMGLNAEVSVGSSLVTMYSKCGSIDECHKVFEQIEKPDLISWTAMIVSYAQHGKG 732
Query: 415 KEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTC 473
E + + + G +PD ++F+ LSAC H G ++ G + MA Y ++P HY C
Sbjct: 733 AEALKVYDLMRKEGTKPDSVTFVGVLSACSHNGMVEEGYSHLNSMAKEYGIEPGYYHYAC 792
Query: 474 MVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNN 533
MVDLL R+G L EA FI +P+ PD+++WG LL C HG++E G++AA R+IELEP
Sbjct: 793 MVDLLGRSGRLKEAERFINNMPIEPDALLWGILLAACKVHGDIELGRLAAKRVIELEPCE 852
Query: 534 TGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCS 572
G YV L+N+ A G W D+ + R M+ + K PG S
Sbjct: 853 AGAYVTLSNICADMGWWEDVMKIRSLMEGTGVKKEPGWS 891
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 124/461 (26%), Positives = 222/461 (48%), Gaps = 41/461 (8%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
N+V W+A+I G +N + A+ + +M PN+ T SS+L ACA L++L G+
Sbjct: 212 NVVCWNAIISGAVKNRENWVALDLFCQMCCRFFMPNSFTFSSILTACAALEELEFGRGVQ 271
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
G++ + G + FV ++D+Y +C DM A+K F + I+N VS TII G+ + +
Sbjct: 272 GWVIKCGAGEDVFVGTAIIDLYAKCRDMDQAVKEFLRMPIRNVVSWTTIISGFVQKDDSI 331
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
A F +M +G + ++N +T SV
Sbjct: 332 SAFHFFKEMRKVGEK-------------INN-----------------------YTITSV 355
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
L AC + +++ ++H+ G D+ V AL+ MY + + ++ F E+E+ +N
Sbjct: 356 LTACTEPVMIKEAVQLHSWIFKTGFYLDSNVSSALINMYSKIGVVDLSERVFREMESTKN 415
Query: 298 L-LGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHA 356
L + + F + T A++LF ML L PD + +LS SL+ G+ +H
Sbjct: 416 LAMWAVMISAFAQSGSTGRAVELFQRMLQEGLRPDKFCSSSVLSIIDSLSL---GRLIHC 472
Query: 357 YAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKE 416
Y ++ G +D+ +G++L MY+KCGSL+ + ++++ D VS +M+T ++ H H ++
Sbjct: 473 YILKIGLFTDISVGSSLFTMYSKCGSLEESYTVFEQMPDKDNVSWASMITGFSEHDHAEQ 532
Query: 417 GIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVD 476
+ FR +L RPD ++ +AL+AC S++ G E V + +V+
Sbjct: 533 AVQLFREMLLEEIRPDQMTLTAALTACSALHSLEKGKEVHGYALRARVGKEVLVGGALVN 592
Query: 477 LLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
+ S+ G + A +P D +L+ G +G +E
Sbjct: 593 MYSKCGAIVLARRVFDMLPQ-KDQFSCSSLVSGYAQNGYIE 632
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 106/432 (24%), Positives = 199/432 (46%), Gaps = 25/432 (5%)
Query: 98 SSVLP-ACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGD-MLSALKIFSKF 155
S++LP AC + L++ + + + + + PF Y + G L KI
Sbjct: 11 SNILPSACRSISSLAVTENSENFHSTHDTVLPPFDPFHFFSDYTKSGRCTLRNTKILHAH 70
Query: 156 SIK------NEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNS 209
+K N N+++ YC++ ++ A LFD+ H V ISWN +ISG N
Sbjct: 71 FLKTAILQSNTFMTNSLMGWYCKSNSMVHALRLFDKTPHPNV----ISWNILISGCNQNF 126
Query: 210 LYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVG 269
+++++ F + G +P FT+GSVL AC + S G+ +++LA+ G S+ +V
Sbjct: 127 SFEDSWRNFCKMRF-SGFDPNQFTYGSVLSACTALGSPLYGELVYSLALKNGFFSNGYVR 185
Query: 270 GALVEMYCRYQDLVAAQMAFDEI--ENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLD 327
+++++ + A F ++ EN+ + G N W A+ LF +M
Sbjct: 186 AGMIDLFAKLCSFEDALRVFQDVLCENV--VCWNAIISGAVKNRENWVALDLFCQMCCRF 243
Query: 328 LTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHAR 387
P+ +T IL+AC++L +E G+ V + I+CG DV +GTA++D+YAKC + A
Sbjct: 244 FMPNSFTFSSILTACAALEELEFGRGVQGWVIKCGAGEDVFVGTAIIDLYAKCRDMDQAV 303
Query: 388 LAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAG 447
+ R+ ++VS +++ + F+ + G + ++ + S L+AC
Sbjct: 304 KEFLRMPIRNVVSWTTIISGFVQKDDSISAFHFFKEMRKVGEKINNYTITSVLTACTEPV 363
Query: 448 SIKTG----SEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMW 503
IK S F Y D S + ++++ S+ G + + +++ + MW
Sbjct: 364 MIKEAVQLHSWIFKTGFYLDSNVS----SALINMYSKIGVVDLSERVFREMESTKNLAMW 419
Query: 504 GALLGGCVSHGN 515
++ G+
Sbjct: 420 AVMISAFAQSGS 431
>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 1058
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 220/693 (31%), Positives = 333/693 (48%), Gaps = 105/693 (15%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y + G L +A+K+F MPE++ SWNSVVT + EA E ++M N VS
Sbjct: 274 YVQNGDLKNARKLFDEMPEKNVASWNSVVTGYCHCYRMSEARELFDQMPE-----RNSVS 328
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSL--------- 112
W +I G+ EA + +M P+ VL A L L L
Sbjct: 329 WMVMISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAITGLDDLELIGSLRPIAI 388
Query: 113 ----------GKEFHGYITRNGFMS------------NPFVVNGLVDVYRRCGDMLSALK 150
G TRNG + N + ++ + +CG + A++
Sbjct: 389 KTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQ 448
Query: 151 -------------------------------IFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
IF + N V+ N II GY +NG + EA
Sbjct: 449 LYERVPEQTVATKTAMMTAYAQVGRIQKARLIFDEILNPNVVAWNAIIAGYTQNGMLKEA 508
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
++LF +M + SW +MI+G+V N EA + +L R G P+ +F S L
Sbjct: 509 KDLFQKMP----VKNSASWAAMIAGFVQNEESREALELLIEL-HRSGSVPSDSSFTSALS 563
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE-----N 294
ACA++ + G+ IH+LAI G Q +++V L+ MY + ++ F I +
Sbjct: 564 ACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVKDTVS 623
Query: 295 IENLLGKMKED--------GFEP----NVYTWNA--------------MQLFSEMLSLDL 328
+L+ + E+ FE +V +W A + LF +ML+ +
Sbjct: 624 WNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGI 683
Query: 329 TPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARL 388
P+ TV +LSAC +L ++ G+Q HA + G+D+ + +G +L+ MY KCG +
Sbjct: 684 KPNQLTVTSLLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFKCG-YEDGFC 742
Query: 389 AYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGS 448
++ + DL++ NA+L A +G GKE I F ++ G PD +SFL L AC HAG
Sbjct: 743 VFEEMPEHDLITWNAVLVGCAQNGLGKEAIKIFEQMEVEGILPDQMSFLGVLCACSHAGL 802
Query: 449 IKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALL 507
+ G F+ M Y + P + HYTCMVDLL RAG L EA I+ +P+ PDSV+W ALL
Sbjct: 803 VDEGWAHFNSMTQKYGIMPLVYHYTCMVDLLGRAGYLSEAEALIENMPVKPDSVIWEALL 862
Query: 508 GGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHK 567
G C H N+E GQ A+RL ++ + YV+L+NLFA G W +A R+ MKD+ + K
Sbjct: 863 GACRIHRNVELGQRVAERLFQMTKPKSATYVLLSNLFASQGMWDKVAEIRKLMKDQGLTK 922
Query: 568 SPGCSWIEDRDEIHKFRASDRSHDRSEEIYTII 600
PG SWI+ ++++H F DR+HD+ EEIY+ +
Sbjct: 923 EPGISWIQVKNKLHCFVTGDRTHDQIEEIYSAL 955
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 132/530 (24%), Positives = 226/530 (42%), Gaps = 70/530 (13%)
Query: 3 GKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSW 62
G+ G +++A++VF M +RD VSWNS++ + NG V EA + N+ +W
Sbjct: 182 GRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAFVG-----KNIRTW 236
Query: 63 SAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITR 122
+ ++ G+ + G EEA +E +T
Sbjct: 237 TILLTGYAKEGRIEEA-----------------------------------REVFESMTE 261
Query: 123 NGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAREL 182
+S N ++ Y + GD+ +A K+F + KN S N+++ GYC ++EAREL
Sbjct: 262 RNVVS----WNAMISGYVQNGDLKNARKLFDEMPEKNVASWNSVVTGYCHCYRMSEAREL 317
Query: 183 FDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACA 242
FDQM +R +SW MISGYV S Y EA+ +F + R P F VL A
Sbjct: 318 FDQMP----ERNSVSWMVMISGYVHISDYWEAWDVFVKMC-RTVARPDQSIFVVVLSAIT 372
Query: 243 DMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKM 302
++ L + +AI G + D VG A++ Y R L A F+ +
Sbjct: 373 GLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMP--------- 423
Query: 303 KEDGFEPNVYTWNAM-QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV-HAYAIR 360
E N Y+W M F++ LD +Y + + A M QV R
Sbjct: 424 -----ERNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQTVATKTAMMTAYAQVGRIQKAR 478
Query: 361 CGYDS----DVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKE 416
+D +V A++ Y + G LK A+ ++++ + S AM+ + + +E
Sbjct: 479 LIFDEILNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESRE 538
Query: 417 GIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVD 476
+ + SG P SF SALSAC + G ++ G L + + ++
Sbjct: 539 ALELLIELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLIS 598
Query: 477 LLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRL 526
+ ++ G + + + I + D+V W +L+ G + L+ ++ +++
Sbjct: 599 MYAKCGNVEDGSHVFRTIRVK-DTVSWNSLISGLSENYMLDDARVVFEKM 647
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 168/343 (48%), Gaps = 42/343 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG+++D VF+ + +D VSWNS+++ + N ++ +A E+M D +V
Sbjct: 599 MYAKCGNVEDGSHVFRTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMPKRD-----VV 653
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A+I + Q G+ E A+ + M A G++PN T++S+L AC L + LG++FH I
Sbjct: 654 SWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQFHALI 713
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ GF + FV N L+ +Y +CG +F + + ++ N ++VG +NG EA
Sbjct: 714 FKLGFDTFLFVGNSLITMYFKCG-YEDGFCVFEEMPEHDLITWNAVLVGCAQNGLGKEAI 772
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
++F+QME G+ +S+ ++ L DE ++ F + + GI P + + ++
Sbjct: 773 KIFEQMEVEGILPDQMSFLGVLCACSHAGLVDEGWAHFNSMTQKYGIMPLVYHYTCMVDL 832
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGAL---------VEM---------------- 275
L E AL + ++ D+ + AL VE+
Sbjct: 833 LGRAGYL---SEAEALIENMPVKPDSVIWEALLGACRIHRNVELGQRVAERLFQMTKPKS 889
Query: 276 --YCRYQDLVAAQMAFDEIENIENLLGKMKEDGF--EPNVYTW 314
Y +L A+Q +D++ I L MK+ G EP + +W
Sbjct: 890 ATYVLLSNLFASQGMWDKVAEIRKL---MKDQGLTKEPGI-SW 928
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 106/442 (23%), Positives = 191/442 (43%), Gaps = 63/442 (14%)
Query: 93 NARTLSSVLPAC-ARLQKLS-LGKEFHGYITRNGFMSNPFVV-NGLVDVYRRCGDMLSAL 149
N T + L C R+Q+L LG+ N + V N +++ Y + G + A
Sbjct: 163 NKETPQTHLFQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEAR 222
Query: 150 KIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNS 209
+F F KN + ++ GY + G + EARE+F+ M +R ++SWN+MISGYV N
Sbjct: 223 LLFDAFVGKNIRTWTILLTGYAKEGRIEEAREVFESM----TERNVVSWNAMISGYVQNG 278
Query: 210 LYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVG 269
A +F ++ ++ A NS+ G
Sbjct: 279 DLKNARKLFDEMPEKN---------------VASWNSVVTG------------------- 304
Query: 270 GALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLT 329
YC + A+ FD++ ++ + G+ W A +F +M
Sbjct: 305 ------YCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVAR 358
Query: 330 PDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLA 389
PD ++LSA + L +E + AI+ GY+ DV +G+A+++ Y + GSL A
Sbjct: 359 PDQSIFVVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHF 418
Query: 390 YKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHI--SFLSALSACVHAG 447
++ + + S M+ A+A G + I + R+ P+ + + ++A G
Sbjct: 419 FETMPERNEYSWTTMIAAFAQCGRLDDAIQLYERV------PEQTVATKTAMMTAYAQVG 472
Query: 448 SIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALL 507
I+ FD + + P++ + ++ ++ G L EA + +K+P+ +S W A++
Sbjct: 473 RIQKARLIFDEI----LNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVK-NSASWAAMI 527
Query: 508 GGCVSHGNLEFGQIAADRLIEL 529
G V + E + A + LIEL
Sbjct: 528 AGFVQN---EESREALELLIEL 546
>gi|449520177|ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 208/657 (31%), Positives = 342/657 (52%), Gaps = 74/657 (11%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETP--- 57
MY K +L A+++F+ +P D ++ +++TA A G LE + N TP
Sbjct: 57 MYCKSSNLVYARQLFEEIPNPDAIARTTLITAYCALG-------NLELGREIFNGTPLYM 109
Query: 58 -NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKE- 115
+ V ++A+I G+ NG A+ + M+ + P+ T +SVL A L +G E
Sbjct: 110 RDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTFTSVLSALV----LFVGNEQ 165
Query: 116 ----FHGYITRNGF-MSNPFVVNGLVDVYRR--------CGDMLSALKIFSKFSIKNEVS 162
H + + G + V+N L+ VY + C M+SA K+F + ++E++
Sbjct: 166 QCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRASELGISCSAMVSARKLFDEMPKRDELT 225
Query: 163 CNTIIVGYCENGNVAEARELFDQM-EHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDL 221
T+I GY N ++ ARE+F+ M E+LG +WN+MISGYV + EA ++ R +
Sbjct: 226 WTTMITGYVRNDDLNGAREVFEAMVENLGA-----AWNAMISGYVHCGCFQEALTLCRKM 280
Query: 222 LMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSD-TF---VGGALVEMYC 277
GI+ T+ +++ ACA++ S + GK++HA + L + +F V AL+ +YC
Sbjct: 281 RFL-GIQFDDITYTTIISACANVGSFQMGKQVHAYILKNELNPNHSFCLSVSNALITLYC 339
Query: 278 RYQDLVAAQMAFDEIENIENLL------------GKMKE--------------------D 305
+ + A+ F + + N++ G+M+E
Sbjct: 340 KNNKVDEARKIFYAMP-VRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMIS 398
Query: 306 GFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDS 365
G N + ++LF +M P + L+ACS L +E G+Q+HA + GY+S
Sbjct: 399 GLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYES 458
Query: 366 DVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRIL 425
+ +G A++ MYAKCG ++ A + + + DLVS N+M+ A HGHG + I F ++L
Sbjct: 459 SLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQML 518
Query: 426 ASGFRPDHISFLSALSACVHAGSIKTGSEFFD-LMAYYDVKPSLKHYTCMVDLLSRAGEL 484
G PD I+FL+ L+AC HAG ++ G +F+ ++ Y + P HY MVDL RAG
Sbjct: 519 KEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFCRAGMF 578
Query: 485 GEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLF 544
A I +P P + +W ALL GC HGN++ G AA++L +L P N G YV+L+N++
Sbjct: 579 SYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQLFKLMPQNDGTYVLLSNIY 638
Query: 545 AYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
A GRW+++A+ R+ M+D+ + K P CSWIE +++H F D H +Y ++
Sbjct: 639 ADVGRWNEVAKVRKLMRDQAVRKEPACSWIEVENKVHVFMVDDDVHPEVLSVYRYLE 695
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 113/482 (23%), Positives = 210/482 (43%), Gaps = 80/482 (16%)
Query: 110 LSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVG 169
SL + H ++ +GF +N L+++Y + +++ A ++F + + ++ T+I
Sbjct: 29 FSLARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNLVYARQLFEEIPNPDAIARTTLITA 88
Query: 170 YCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEP 229
YC GN+ RE+F+ R + +N+MI+GY N A +FR + RD P
Sbjct: 89 YCALGNLELGREIFNGTPLY--MRDSVFYNAMITGYAHNGDGHSALELFR-AMRRDDFRP 145
Query: 230 TSFTFGSVLIACA-DMNSLRKGKEIHALAIALGLQS-DTFVGGALVEMYCRYQD------ 281
FTF SVL A + + ++ ++H + G+ + V AL+ +Y +
Sbjct: 146 DDFTFTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRASELGISC 205
Query: 282 --LVAAQMAFDEIENIENL------LGKMKEDG-------FEPNV----YTWNAM----- 317
+V+A+ FDE+ + L G ++ D FE V WNAM
Sbjct: 206 SAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYV 265
Query: 318 ---------QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSD-- 366
L +M L + D T I+SAC+++ + + GKQVHAY ++ + +
Sbjct: 266 HCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQVHAYILKNELNPNHS 325
Query: 367 --VHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAY---------------- 408
+ + AL+ +Y K + AR + + ++++ NA+L+ Y
Sbjct: 326 FCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEM 385
Query: 409 ---------------AMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGS 453
A +G G EG+ F+++ GF P +F AL+AC G+++ G
Sbjct: 386 PVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGR 445
Query: 454 EFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSH 513
+ + + + SL M+ + ++ G + A +P + D V W +++ H
Sbjct: 446 QLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMP-SVDLVSWNSMIAALGQH 504
Query: 514 GN 515
G+
Sbjct: 505 GH 506
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 99/263 (37%), Gaps = 74/263 (28%)
Query: 324 LSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSL 383
L + L + Y + L + A+ + VHA+ I G+ H L++MY K +L
Sbjct: 5 LDIRLLANRYAEKLQLCSPQDPASFSLARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNL 64
Query: 384 KHARLAYKRISTPDLVSQ---------------------------------NAMLTAYAM 410
+AR ++ I PD +++ NAM+T YA
Sbjct: 65 VYARQLFEEIPNPDAIARTTLITAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAH 124
Query: 411 HGHGKEGIAHFRRILASGFRPDHISFLSALSACV------------HAGSIKTG------ 452
+G G + FR + FRPD +F S LSA V H +KTG
Sbjct: 125 NGDGHSALELFRAMRRDDFRPDDFTFTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSS 184
Query: 453 SEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELG-------EAYEFIKKIPMAPDSVMWGA 505
S L++ Y + RA ELG A + ++P D + W
Sbjct: 185 SVLNALLSVY---------------VKRASELGISCSAMVSARKLFDEMP-KRDELTWTT 228
Query: 506 LLGGCVSHGNLEFGQIAADRLIE 528
++ G V + +L + + ++E
Sbjct: 229 MITGYVRNDDLNGAREVFEAMVE 251
>gi|356568485|ref|XP_003552441.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 1011
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 183/569 (32%), Positives = 306/569 (53%), Gaps = 24/569 (4%)
Query: 52 LDNETP--NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQK 109
L +E P N +W+ +I GF + G E + MQA+G PN TLSSVL C+
Sbjct: 346 LFDEIPQRNTQTWTILISGFARAGSSEMVFNLFREMQAKGACPNQYTLSSVLKCCSLDNN 405
Query: 110 LSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVG 169
L LGK H ++ RNG + + N ++D+Y +C A ++F + + VS N +I
Sbjct: 406 LQLGKGVHAWMLRNGIDVDVVLGNSILDLYLKCKVFEYAERLFELMNEGDVVSWNIMIGA 465
Query: 170 YCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEP 229
Y G+V ++ ++F ++ + + ++SWN+++ G + A ++ G E
Sbjct: 466 YLRAGDVEKSLDMFRRLPY----KDVVSWNTIVDGLLQCGYERHALEQLY-CMVECGTEF 520
Query: 230 TSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAF 289
++ TF LI + ++ + G+++H + + G SD F+ +LVEMYC+ + A +
Sbjct: 521 SAVTFSIALILASSLSHVELGRQLHGMVLKFGFDSDGFIRSSLVEMYCKCGRMDKASIIL 580
Query: 290 DEIENIENLLGKMKEDGFEPNV-----------YTWNA-----MQLFSEMLSLDLTPDIY 333
++ G + EP Y WN ++ F M+ + DI
Sbjct: 581 RDVPLDVLRKGNARVSYKEPKAGIVSWGSMVSGYVWNGKYEDGLKTFRLMVRELVVVDIR 640
Query: 334 TVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRI 393
TV I+SAC++ +E G+ VHAY + G+ D ++G++L+DMY+K GSL A + +++
Sbjct: 641 TVTTIISACANAGILEFGRHVHAYVQKIGHRIDAYVGSSLIDMYSKSGSLDDAWMVFRQS 700
Query: 394 STPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGS 453
+ P++V +M++ YA+HG G I F +L G P+ ++FL L+AC HAG I+ G
Sbjct: 701 NEPNIVMWTSMISGYALHGQGMHAIGLFEEMLNQGIIPNEVTFLGVLNACSHAGLIEEGC 760
Query: 454 EFFDLMA-YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVS 512
+F +M Y + P ++H T MVDL RAG L + FI K ++ + +W + L C
Sbjct: 761 RYFRMMKDAYCINPGVEHCTSMVDLYGRAGHLTKTKNFIFKNGISHLTSVWKSFLSSCRL 820
Query: 513 HGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCS 572
H N+E G+ ++ L+++ P++ G YV+L+N+ A RW + AR R M R + K PG S
Sbjct: 821 HKNVEMGKWVSEMLLQVAPSDPGAYVLLSNMCASNHRWDEAARVRSLMHQRGVKKQPGQS 880
Query: 573 WIEDRDEIHKFRASDRSHDRSEEIYTIID 601
WI+ +D+IH F DRSH + +EIY+ +D
Sbjct: 881 WIQLKDQIHTFVMGDRSHPQDDEIYSYLD 909
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 117/392 (29%), Positives = 196/392 (50%), Gaps = 34/392 (8%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KC + A+++F++M E D VSWN ++ A G V ++L+ R+ D +V
Sbjct: 434 LYLKCKVFEYAERLFELMNEGDVVSWNIMIGAYLRAGDVEKSLDMFRRLPYKD-----VV 488
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ ++ G Q GY+ A+ L+ M G E +A T S L + L + LG++ HG +
Sbjct: 489 SWNTIVDGLLQCGYERHALEQLYCMVECGTEFSAVTFSIALILASSLSHVELGRQLHGMV 548
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ GF S+ F+ + LV++Y +CG M A I +V + + GN AR
Sbjct: 549 LKFGFDSDGFIRSSLVEMYCKCGRMDKASIIL------RDVPLDVL-----RKGN---AR 594
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+ + + GI+SW SM+SGYV N Y++ FR L++R+ + T +++ A
Sbjct: 595 VSYKE-----PKAGIVSWGSMVSGYVWNGKYEDGLKTFR-LMVRELVVVDIRTVTTIISA 648
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA+ L G+ +HA +G + D +VG +L++MY + L A M F + ++
Sbjct: 649 CANAGILEFGRHVHAYVQKIGHRIDAYVGSSLIDMYSKSGSLDDAWMVFRQSNEPNIVMW 708
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVH----- 355
G+ + +A+ LF EML+ + P+ T +L+ACS +E G +
Sbjct: 709 TSMISGYALHGQGMHAIGLFEEMLNQGIIPNEVTFLGVLNACSHAGLIEEGCRYFRMMKD 768
Query: 356 AYAIRCGYDSDVHIGTALVDMYAKCGSLKHAR 387
AY I G V T++VD+Y + G L +
Sbjct: 769 AYCINPG----VEHCTSMVDLYGRAGHLTKTK 796
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/449 (21%), Positives = 189/449 (42%), Gaps = 88/449 (19%)
Query: 116 FHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGN 175
H +NG + N L+ +Y + +M A K+F + +N + +I G+ G+
Sbjct: 311 LHALYVKNGSLQTLNPANHLLTLYAKSNNMAHAQKLFDEIPQRNTQTWTILISGFARAGS 370
Query: 176 VAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFG 235
+ F++FR++ + G P +T
Sbjct: 371 -----------------------------------SEMVFNLFREMQAK-GACPNQYTLS 394
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE-- 293
SVL C+ N+L+ GK +HA + G+ D +G +++++Y + + A+ F+ +
Sbjct: 395 SVLKCCSLDNNLQLGKGVHAWMLRNGIDVDVVLGNSILDLYLKCKVFEYAERLFELMNEG 454
Query: 294 ----------------NIENLLGKMKEDGFEPNVYTWN--------------AMQLFSEM 323
++E L + ++ +V +WN A++ M
Sbjct: 455 DVVSWNIMIGAYLRAGDVEKSLDMFRRLPYK-DVVSWNTIVDGLLQCGYERHALEQLYCM 513
Query: 324 LSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSL 383
+ T I L SSL+ +E G+Q+H ++ G+DSD I ++LV+MY KCG +
Sbjct: 514 VECGTEFSAVTFSIALILASSLSHVELGRQLHGMVLKFGFDSDGFIRSSLVEMYCKCGRM 573
Query: 384 K-----------------HARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILA 426
+AR++YK +VS +M++ Y +G ++G+ FR ++
Sbjct: 574 DKASIILRDVPLDVLRKGNARVSYKE-PKAGIVSWGSMVSGYVWNGKYEDGLKTFRLMVR 632
Query: 427 SGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGE 486
D + + +SAC +AG ++ G + + + ++D+ S++G L +
Sbjct: 633 ELVVVDIRTVTTIISACANAGILEFGRHVHAYVQKIGHRIDAYVGSSLIDMYSKSGSLDD 692
Query: 487 AYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
A+ ++ P+ VMW +++ G HG
Sbjct: 693 AWMVFRQ-SNEPNIVMWTSMISGYALHGQ 720
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 65/164 (39%), Gaps = 43/164 (26%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K GSLDDA VF+ E PN+V
Sbjct: 683 MYSKSGSLDDAWMVFRQSNE------------------------------------PNIV 706
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
W+++I G+ +G AIG+ M +G+ PN T VL AC+ + G + +
Sbjct: 707 MWTSMISGYALHGQGMHAIGLFEEMLNQGIIPNEVTFLGVLNACSHAGLIEEGCRYF-RM 765
Query: 121 TRNGFMSNPFV--VNGLVDVYRRCGDMLSALKIFSKFSIKNEVS 162
++ + NP V +VD+Y R G + F KN +S
Sbjct: 766 MKDAYCINPGVEHCTSMVDLYGRAGHLTKT----KNFIFKNGIS 805
>gi|225458036|ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
[Vitis vinifera]
Length = 799
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 207/648 (31%), Positives = 333/648 (51%), Gaps = 56/648 (8%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y K L A +F + + D V+ +++ A ++ G A E +T V
Sbjct: 59 VYCKSSDLVSAHHLFDEIRQPDIVARTTLIAAHSSAGNSNLAREIFFATPLGIRDT---V 115
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARL-QKLSLGKEFHGY 119
++A+I G++ N AI + + G P+ T +SVL A A + + ++ H
Sbjct: 116 CYNAMITGYSHNNDGFGAIELFRDLLRNGFRPDNFTFTSVLGALALIVEDEKQCQQIHCA 175
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGD---------MLSALKIFSKFSIKNEVSCNTIIVGY 170
+ ++G V+N L+ V+ +C M +A K+F + + ++E+S T+I GY
Sbjct: 176 VVKSGSGFVTSVLNALLSVFVKCASSPLVSSSSLMAAARKLFDEMTERDELSWTTMIAGY 235
Query: 171 CENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPT 230
NG + AR+ D M ++ +++WN+MISGYV + + EA MFR + + GI+
Sbjct: 236 VRNGELDAARQFLDGM----TEKLVVAWNAMISGYVHHGFFLEALEMFRKMYLL-GIQWD 290
Query: 231 SFTFGSVLIACADMNSLRKGKEIHALAIAL----GLQSDTFVGGALVEMYCRYQDLVAAQ 286
FT+ SVL ACA+ GK++HA + L V AL +Y + + A+
Sbjct: 291 EFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLDFSLSVNNALATLYWKCGKVDEAR 350
Query: 287 MAFDEIENIENLL------------GKMKE------DGFEPNVYTWNAM----------- 317
F+++ +++L+ G++ E + E N+ TW M
Sbjct: 351 QVFNQMP-VKDLVSWNAILSGYVNAGRIDEAKSFFEEMPERNLLTWTVMISGLAQNGFGE 409
Query: 318 ---QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALV 374
+LF+ M S P Y + AC+ LA + G+Q+HA +R G+DS + G AL+
Sbjct: 410 ESLKLFNRMKSEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQLVRLGFDSSLSAGNALI 469
Query: 375 DMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHI 434
MYAKCG ++ A + + D VS NAM+ A HGHG + + F +L PD I
Sbjct: 470 TMYAKCGVVEAAHCLFLTMPYLDSVSWNAMIAALGQHGHGAQALELFELMLKEDILPDRI 529
Query: 435 SFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKK 493
+FL+ LS C HAG ++ G +F M+ Y + P HY M+DLL RAG+ EA + I+
Sbjct: 530 TFLTVLSTCSHAGLVEEGHRYFKSMSGLYGICPGEDHYARMIDLLCRAGKFSEAKDMIET 589
Query: 494 IPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDL 553
+P+ P +W ALL GC HGN++ G AA+RL EL P + G YV+L+N++A GRW D+
Sbjct: 590 MPVEPGPPIWEALLAGCRIHGNMDLGIQAAERLFELMPQHDGTYVLLSNMYATVGRWDDV 649
Query: 554 ARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
A+ R+ M+D+ + K PGCSWIE +++H F D H + +Y ++
Sbjct: 650 AKVRKLMRDKGVKKEPGCSWIEVENKVHVFLVDDIVHPEVQAVYNYLE 697
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 128/481 (26%), Positives = 211/481 (43%), Gaps = 80/481 (16%)
Query: 111 SLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGY 170
S+ + H ++ +GF +++N L+DVY + D++SA +F + + V+ T+I +
Sbjct: 32 SIARTVHAHMIASGFKPRGYILNRLIDVYCKSSDLVSAHHLFDEIRQPDIVARTTLIAAH 91
Query: 171 CENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPT 230
GN ARE+F LG+ R + +N+MI+GY N+ A +FRDLL R+G P
Sbjct: 92 SSAGNSNLAREIFFATP-LGI-RDTVCYNAMITGYSHNNDGFGAIELFRDLL-RNGFRPD 148
Query: 231 SFTFGSVLIACA-DMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCR---------YQ 280
+FTF SVL A A + ++ ++IH + G T V AL+ ++ +
Sbjct: 149 NFTFTSVLGALALIVEDEKQCQQIHCAVVKSGSGFVTSVLNALLSVFVKCASSPLVSSSS 208
Query: 281 DLVAAQMAFDEIENIENLLGKMKEDGFEPN-----------------VYTWNAM------ 317
+ AA+ FDE+ + L G+ N V WNAM
Sbjct: 209 LMAAARKLFDEMTERDELSWTTMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVH 268
Query: 318 --------QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRC----GYDS 365
++F +M L + D +T +LSAC++ GKQVHAY +R D
Sbjct: 269 HGFFLEALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLDF 328
Query: 366 DVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAY----------------- 408
+ + AL +Y KCG + AR + ++ DLVS NA+L+ Y
Sbjct: 329 SLSVNNALATLYWKCGKVDEARQVFNQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMP 388
Query: 409 --------------AMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSE 454
A +G G+E + F R+ + GF P +F A+ AC ++ G +
Sbjct: 389 ERNLLTWTVMISGLAQNGFGEESLKLFNRMKSEGFEPCDYAFAGAIIACAWLAALMHGRQ 448
Query: 455 FFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
+ SL ++ + ++ G + A+ +P DSV W A++ HG
Sbjct: 449 LHAQLVRLGFDSSLSAGNALITMYAKCGVVEAAHCLFLTMPYL-DSVSWNAMIAALGQHG 507
Query: 515 N 515
+
Sbjct: 508 H 508
>gi|242034187|ref|XP_002464488.1| hypothetical protein SORBIDRAFT_01g019317 [Sorghum bicolor]
gi|241918342|gb|EER91486.1| hypothetical protein SORBIDRAFT_01g019317 [Sorghum bicolor]
Length = 701
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 192/593 (32%), Positives = 299/593 (50%), Gaps = 56/593 (9%)
Query: 57 PNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEF 116
P + SW+ +I G QN +EA+ M E P+A T++S+LPACA LQ L +GK+
Sbjct: 8 PGVNSWNCIISGCVQNALYDEALEFFLEM-CESERPDAVTVASILPACAGLQALGIGKQL 66
Query: 117 HGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNE---------------- 160
H Y+ R G N +V L+ +Y CG+ A +FS KN
Sbjct: 67 HSYVLRCGIKINVYVGASLIALYSECGEFDDARVVFSTIQEKNVNVWNELVQSYIREGSM 126
Query: 161 -------------------VSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSM 201
V+ N+ I Y + G +A ELF +M +G++ ++S N++
Sbjct: 127 DKAWEAFDLMQEDGLEPDIVTYNSFIAAYAKVGQNEQAYELFSRMADVGLKPNVVSMNAL 186
Query: 202 ISGYVDNSLYDEAFSMFRDLLMR--------------DGIEPTSFTFGSVLIACADMNSL 247
I G + LY +A FR + D I+PT T VL AD+
Sbjct: 187 ICGLHRHGLYTDALEAFRYMQRSSDGKSKGWAFLDNCDPIQPTGTTITGVLSLLADLKLD 246
Query: 248 RKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGF 307
R GKE+H A+ GL S+ ++ LV++Y + D+ +A F +I N + +
Sbjct: 247 RLGKEVHCYALKNGLASNIYISSKLVDLYGKIGDMTSAANVFQKIGNKNVVTWNSLMAAY 306
Query: 308 EPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRC---GYD 364
+ N ++L EM +L P++ TV I L +C + G+++H+Y +C GY
Sbjct: 307 KHNRMPEVTLKLLGEMFQSNLHPNLVTVHIALMSCGVTMALGYGRELHSYITKCWPGGYP 366
Query: 365 SDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRI 424
+ + +AL++MY KCG+++ ARL +K D+ NAM++ Y +H + I F +
Sbjct: 367 TT--LASALINMYGKCGNIEDARLVFKSTVPKDIAVWNAMMSCYLLHRMPMDIIDLFNYL 424
Query: 425 LASGFRPDHISFLSALSACVHAGSIKTG-SEFFDLMAYYDVKPSLKHYTCMVDLLSRAGE 483
SG +PDHI+F+ LSAC G + S F+++ Y +KPSLKHYTCMVD++ AG
Sbjct: 425 EQSGIQPDHITFILLLSACKQEGLFEEAQSYFYNMEDVYGIKPSLKHYTCMVDIMGSAGL 484
Query: 484 LGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANL 543
L E+ I+K+P+ PD+ +W +L C H NLE G+ AA L ELEP+N NY++L+N+
Sbjct: 485 LAESLTLIQKMPLKPDACLWSTVLKACKLHSNLEIGEKAAKALFELEPHNPSNYMVLSNI 544
Query: 544 FAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEI 596
+A G R M ++ +H CSW+ + +H F A + SH + I
Sbjct: 545 YADTGLLDASEAVRDAMTEQGLHVDRQCSWLYNGTTVHSFEAGNLSHPAIDAI 597
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/415 (24%), Positives = 176/415 (42%), Gaps = 91/415 (21%)
Query: 186 MEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMN 245
M GV G+ SWN +ISG V N+LYDEA F L M + P + T S+L ACA +
Sbjct: 1 MRQRGVDPGVNSWNCIISGCVQNALYDEALEFF--LEMCESERPDAVTVASILPACAGLQ 58
Query: 246 SLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE----NIENLLGK 301
+L GK++H+ + G++ + +VG +L+ +Y + A++ F I+ N+ N L +
Sbjct: 59 ALGIGKQLHSYVLRCGIKINVYVGASLIALYSECGEFDDARVVFSTIQEKNVNVWNELVQ 118
Query: 302 -----------------MKEDGFEPNVYTWN--------------AMQLFSEMLSLDLTP 330
M+EDG EP++ T+N A +LFS M + L P
Sbjct: 119 SYIREGSMDKAWEAFDLMQEDGLEPDIVTYNSFIAAYAKVGQNEQAYELFSRMADVGLKP 178
Query: 331 DIYTV----------GIILSACSSLATMER------------------------------ 350
++ ++ G+ A + M+R
Sbjct: 179 NVVSMNALICGLHRHGLYTDALEAFRYMQRSSDGKSKGWAFLDNCDPIQPTGTTITGVLS 238
Query: 351 ----------GKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVS 400
GK+VH YA++ G S+++I + LVD+Y K G + A +++I ++V+
Sbjct: 239 LLADLKLDRLGKEVHCYALKNGLASNIYISSKLVDLYGKIGDMTSAANVFQKIGNKNVVT 298
Query: 401 QNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA 460
N+++ AY + + + + S P+ ++ AL +C ++ G E +
Sbjct: 299 WNSLMAAYKHNRMPEVTLKLLGEMFQSNLHPNLVTVHIALMSCGVTMALGYGRELHSYIT 358
Query: 461 YYDVKPSLKHYTCMVDLLSRAGELG--EAYEFIKKIPMAPDSVMWGALLGGCVSH 513
P T L++ G+ G E + K + D +W A++ + H
Sbjct: 359 --KCWPGGYPTTLASALINMYGKCGNIEDARLVFKSTVPKDIAVWNAMMSCYLLH 411
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 108/485 (22%), Positives = 185/485 (38%), Gaps = 120/485 (24%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y +CG DDA+ VF + E++ WN +V + G + +A E + M D P++V
Sbjct: 88 LYSECGEFDDARVVFSTIQEKNVNVWNELVQSYIREGSMDKAWEAFDLMQE-DGLEPDIV 146
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNA-------------------------- 94
++++ I + + G +E+A + RM GL+PN
Sbjct: 147 TYNSFIAAYAKVGQNEQAYELFSRMADVGLKPNVVSMNALICGLHRHGLYTDALEAFRYM 206
Query: 95 ------------------------RTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPF 130
T++ VL A L+ LGKE H Y +NG SN +
Sbjct: 207 QRSSDGKSKGWAFLDNCDPIQPTGTTITGVLSLLADLKLDRLGKEVHCYALKNGLASNIY 266
Query: 131 VVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLG 190
+ + LVD+Y + GDM SA +F K KN V
Sbjct: 267 ISSKLVDLYGKIGDMTSAANVFQKIGNKNVV----------------------------- 297
Query: 191 VQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKG 250
+WNS+++ Y N + + + ++ + + P T L++C +L G
Sbjct: 298 ------TWNSLMAAYKHNRMPEVTLKLLGEMF-QSNLHPNLVTVHIALMSCGVTMALGYG 350
Query: 251 KEIHA-LAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEP 309
+E+H+ + T + AL+ MY + ++ A++ F +
Sbjct: 351 RELHSYITKCWPGGYPTTLASALINMYGKCGNIEDARLVF--------------KSTVPK 396
Query: 310 NVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVH 355
++ WNAM LF+ + + PD T ++LSAC E Q +
Sbjct: 397 DIAVWNAMMSCYLLHRMPMDIIDLFNYLEQSGIQPDHITFILLLSACKQEGLFEEA-QSY 455
Query: 356 AYAIR--CGYDSDVHIGTALVDMYAKCGSLKHA-RLAYKRISTPDLVSQNAMLTAYAMHG 412
Y + G + T +VD+ G L + L K PD + +L A +H
Sbjct: 456 FYNMEDVYGIKPSLKHYTCMVDIMGSAGLLAESLTLIQKMPLKPDACLWSTVLKACKLHS 515
Query: 413 HGKEG 417
+ + G
Sbjct: 516 NLEIG 520
>gi|449435958|ref|XP_004135761.1| PREDICTED: cohesin subunit SA-1-like [Cucumis sativus]
Length = 1866
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 180/566 (31%), Positives = 301/566 (53%), Gaps = 64/566 (11%)
Query: 49 MSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQ 108
SS +++ N+VSW+++I T+ +A+ M+ G+ PN T S+VL AC
Sbjct: 85 FSSAPDDSKNVVSWTSLITQLTRFKRPFKALTFFNHMRRSGVYPNHYTFSAVLSACTDTT 144
Query: 109 KLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIV 168
G++ H + ++GF++ FVV+ LVD+Y +C DML A K+F + ++N
Sbjct: 145 ASVHGEQMHSLVWKHGFLAEVFVVSALVDMYAKCCDMLMAEKVFEEMPVRN--------- 195
Query: 169 GYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIE 228
++SWN+MI G++ N LYD+A F+ LL+ +
Sbjct: 196 --------------------------LVSWNTMIVGFLQNKLYDQAIFFFKTLLLENLTA 229
Query: 229 PTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMA 288
+F SV ACA+ +L GK++H +A+ LG+ + ++ +L +MY +
Sbjct: 230 LDEVSFSSVFSACANAGNLEFGKQVHGVALKLGVWNLVYINNSLSDMYGKC--------- 280
Query: 289 FDEIENIENLLGKMKEDGFEPNVYTWNAMQL--------------FSEMLSLDLTPDIYT 334
+ N + K+ + +V TWN M + F M PD +
Sbjct: 281 -----GLFNDVAKLFSNTGARDVVTWNIMIMAYVYNHNYEDACNSFWMMRRKGSIPDEAS 335
Query: 335 VGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS 394
+L +C++LA + +G +H IR G+ ++ + ++L+ MYAKCGSL A ++
Sbjct: 336 YSSVLHSCANLAALYQGTLIHNQIIRSGFVKNLRVASSLITMYAKCGSLVDAFQIFEETE 395
Query: 395 TPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSE 454
++V A++ A HGH + F ++L G +PD+I+F+S LSAC H G ++ G
Sbjct: 396 DRNVVCWTAIIAACQQHGHANWVVELFEQMLREGIKPDYITFVSVLSACSHTGRVEEGFF 455
Query: 455 FFD-LMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSH 513
+F+ ++ + + P +HY C+VDLLSRAGEL A FI+ +P+ PD+ +WGALL C +H
Sbjct: 456 YFNSMIKVHGIYPGHEHYACIVDLLSRAGELDRAKRFIELMPIKPDASVWGALLSACRNH 515
Query: 514 GNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSW 573
NL G+ A +L +LEP+N GNYV+L N+ G ++ R+KM+ + K PGCSW
Sbjct: 516 SNLIMGKEVALKLFDLEPDNPGNYVLLCNILTRNGMLNEADEVRRKMESIGVRKEPGCSW 575
Query: 574 IEDRDEIHKFRASDRSHDRSEEIYTI 599
I+ ++ + F D+SH++++EIY +
Sbjct: 576 IDIKNSTYVFTVHDKSHEKTKEIYEM 601
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/432 (25%), Positives = 200/432 (46%), Gaps = 42/432 (9%)
Query: 86 QAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDM 145
Q L P +L+S+L C+R K + + H + +S PF+ N L+++Y +CG +
Sbjct: 23 QTPFLHP-LTSLNSLL-NCSRTSKHA--TQIHSQLITTALLSLPFLFNNLLNLYAKCGSV 78
Query: 146 LSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGY 205
L +FS ++ NV +SW S+I+
Sbjct: 79 DQTLLLFSS--------------APDDSKNV-------------------VSWTSLITQL 105
Query: 206 VDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSD 265
+A + F + + R G+ P +TF +VL AC D + G+++H+L G ++
Sbjct: 106 TRFKRPFKALTFF-NHMRRSGVYPNHYTFSAVLSACTDTTASVHGEQMHSLVWKHGFLAE 164
Query: 266 TFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG-KMKEDGFEPNVYTWNAMQLFSEML 324
FV ALV+MY + D++ A+ F+E+ + NL+ GF N A+ F +L
Sbjct: 165 VFVVSALVDMYAKCCDMLMAEKVFEEMP-VRNLVSWNTMIVGFLQNKLYDQAIFFFKTLL 223
Query: 325 SLDLTP-DIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSL 383
+LT D + + SAC++ +E GKQVH A++ G + V+I +L DMY KCG
Sbjct: 224 LENLTALDEVSFSSVFSACANAGNLEFGKQVHGVALKLGVWNLVYINNSLSDMYGKCGLF 283
Query: 384 KHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSAC 443
+ D+V+ N M+ AY + + ++ F + G PD S+ S L +C
Sbjct: 284 NDVAKLFSNTGARDVVTWNIMIMAYVYNHNYEDACNSFWMMRRKGSIPDEASYSSVLHSC 343
Query: 444 VHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMW 503
+ ++ G+ + + +L+ + ++ + ++ G L +A++ ++ + V W
Sbjct: 344 ANLAALYQGTLIHNQIIRSGFVKNLRVASSLITMYAKCGSLVDAFQIFEETE-DRNVVCW 402
Query: 504 GALLGGCVSHGN 515
A++ C HG+
Sbjct: 403 TAIIAACQQHGH 414
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 124/515 (24%), Positives = 198/515 (38%), Gaps = 147/515 (28%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC + A+KVF+ MP R+ VSWN+++
Sbjct: 174 MYAKCCDMLMAEKVFEEMPVRNLVSWNTMIV----------------------------- 204
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEP-NARTLSSVLPACARLQKLSLGKEFHGY 119
GF QN ++AI + E L + + SSV ACA L GK+ HG
Sbjct: 205 -------GFLQNKLYDQAIFFFKTLLLENLTALDEVSFSSVFSACANAGNLEFGKQVHGV 257
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ G + ++ N L D+Y +CG K+FS ++ V+ N +I+ Y N N +A
Sbjct: 258 ALKLGVWNLVYINNSLSDMYGKCGLFNDVAKLFSNTGARDVVTWNIMIMAYVYNHNYEDA 317
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
F W ++ R G P ++ SVL
Sbjct: 318 CNSF--------------W----------------------MMRRKGSIPDEASYSSVLH 341
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
+CA++ +L +G IH I G + V +L+ MY + LV A F+E E
Sbjct: 342 SCANLAALYQGTLIHNQIIRSGFVKNLRVASSLITMYAKCGSLVDAFQIFEETE------ 395
Query: 300 GKMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSSL 345
+ NV W A+ +LF +ML + PD T +LSACS
Sbjct: 396 --------DRNVVCWTAIIAACQQHGHANWVVELFEQMLREGIKPDYITFVSVLSACSHT 447
Query: 346 ATMERG-----KQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVS 400
+E G + + I G++ H +VD+ ++ G L A+
Sbjct: 448 GRVEEGFFYFNSMIKVHGIYPGHE---HYA-CIVDLLSRAGELDRAK------------- 490
Query: 401 QNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA 460
R I +PD + + LSAC + ++ G E +
Sbjct: 491 ---------------------RFIELMPIKPDASVWGALLSACRNHSNLIMGKEV--ALK 527
Query: 461 YYDVKP-SLKHYTCMVDLLSRAGELGEAYEFIKKI 494
+D++P + +Y + ++L+R G L EA E +K+
Sbjct: 528 LFDLEPDNPGNYVLLCNILTRNGMLNEADEVRRKM 562
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 92/197 (46%), Gaps = 8/197 (4%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGSL DA ++F+ +R+ V W +++ AC +G +E E+M + P+ +
Sbjct: 377 MYAKCGSLVDAFQIFEETEDRNVVCWTAIIAACQQHGHANWVVELFEQMLR-EGIKPDYI 435
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRM-QAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
++ +V+ + G EE M + G+ P + ++ +R +L K F
Sbjct: 436 TFVSVLSACSHTGRVEEGFFYFNSMIKVHGIYPGHEHYACIVDLLSRAGELDRAKRF--- 492
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSK-FSIKNEVSCNTIIVG--YCENGNV 176
I + V L+ R +++ ++ K F ++ + N +++ NG +
Sbjct: 493 IELMPIKPDASVWGALLSACRNHSNLIMGKEVALKLFDLEPDNPGNYVLLCNILTRNGML 552
Query: 177 AEARELFDQMEHLGVQR 193
EA E+ +ME +GV++
Sbjct: 553 NEADEVRRKMESIGVRK 569
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 94/231 (40%), Gaps = 41/231 (17%)
Query: 329 TPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARL 388
TP ++ + + S + T + Q+H+ I S + L+++YAKCGS+ L
Sbjct: 24 TPFLHPLTSLNSLLNCSRTSKHATQIHSQLITTALLSLPFLFNNLLNLYAKCGSVDQTLL 83
Query: 389 AYKRISTPD----LVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACV 444
+ S PD +VS +++T + + F + SG P+H +F + LSAC
Sbjct: 84 LFS--SAPDDSKNVVSWTSLITQLTRFKRPFKALTFFNHMRRSGVYPNHYTFSAVLSACT 141
Query: 445 HAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPM-------- 496
+ G + L+ + + + +VD+ ++ ++ A + +++P+
Sbjct: 142 DTTASVHGEQMHSLVWKHGFLAEVFVVSALVDMYAKCCDMLMAEKVFEEMPVRNLVSWNT 201
Query: 497 ---------------------------APDSVMWGALLGGCVSHGNLEFGQ 520
A D V + ++ C + GNLEFG+
Sbjct: 202 MIVGFLQNKLYDQAIFFFKTLLLENLTALDEVSFSSVFSACANAGNLEFGK 252
>gi|357440579|ref|XP_003590567.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479615|gb|AES60818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1212
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 187/599 (31%), Positives = 314/599 (52%), Gaps = 76/599 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY CG ++DA++VFK M +DCVS
Sbjct: 295 MYANCGQMEDAERVFKSMLFKDCVS----------------------------------- 319
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
W+ ++ G QN +AI MQ G +P+ ++ +++ A R L G E H Y
Sbjct: 320 -WNTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQVSVLNMIAASGRSANLLAGMEVHAYA 378
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
++G SN + N L+D+Y +C C +G
Sbjct: 379 IKHGIDSNMHIGNSLIDMYGKC--------------------CCVKYMG----------- 407
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDL-LMRDGIEPTSFTFGSVLI 239
F+ M ++ +ISW ++I+GY N + +A ++ R + L + ++P GS+L+
Sbjct: 408 SAFEYMP----EKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDP--MMIGSILL 461
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
AC+ + S + KEIH + GL +D + A+V +Y + A+ F+ I + + +
Sbjct: 462 ACSGLKSEKLIKEIHGYVLKGGL-ADILIQNAIVNVYGELALVDYARHVFESINSKDIVS 520
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
N A++LF+ ++ ++ PD+ T+ +L A ++L+++++GK++H + I
Sbjct: 521 WTSMITCCVHNGLAIEALELFNSLIETNIEPDLITLVSVLYAAAALSSLKKGKEIHGFLI 580
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
R G+ + I +LVDMYA+CG++++AR + + DL+ +M+ A MHG GK+ I
Sbjct: 581 RKGFFLEGLIANSLVDMYARCGTMENARNIFNYVKQRDLILWTSMINANGMHGCGKDAID 640
Query: 420 HFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLL 478
F ++ PDHI+FL+ L AC H+G + G + F++M Y ++P +HY C+VDLL
Sbjct: 641 LFSKMTDENVLPDHITFLALLYACSHSGLVVEGKQHFEIMKNEYKLEPWPEHYACLVDLL 700
Query: 479 SRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYV 538
+R+ L EAY F++ +P+ P + +W ALLG C H N + G++AA +L++L N+GNYV
Sbjct: 701 ARSNSLEEAYHFVRNMPIEPSAEVWCALLGACRIHSNNDLGEVAAKKLLQLNTENSGNYV 760
Query: 539 MLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
+++N FA GRW+D+ R MK ++ K PGCSWIE ++IH F A D+SH + IY
Sbjct: 761 LVSNTFAADGRWNDVEEVRSIMKGNKLKKKPGCSWIEVENKIHTFMARDKSHPQCNNIY 819
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 143/584 (24%), Positives = 244/584 (41%), Gaps = 111/584 (19%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKCGS DA KVF M ER +WN
Sbjct: 91 MYGKCGSFYDAVKVFDKMSERTIFTWN--------------------------------- 117
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
A+IG G EAI + M+ G+ +A T VL AC ++ LG E HG
Sbjct: 118 ---AMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKACGAFKERRLGCEIHGVA 174
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNE--VSCNTIIVGYCENGNVAE 178
+ G+ FV N L+ +Y +CGD+ A +F ++ + VS N+II + G E
Sbjct: 175 VKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISAHVGEGESLE 234
Query: 179 ARELFDQMEHLGVQ----------------------RG----IISWNSMISGYVDNSLY- 211
A LF +M+ +GV+ RG I+ N YV N+L
Sbjct: 235 ALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVYVSNALIA 294
Query: 212 --------DEAFSMFRDLLMRD------------------------------GIEPTSFT 233
++A +F+ +L +D G +P +
Sbjct: 295 MYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQVS 354
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
+++ A +L G E+HA AI G+ S+ +G +L++MY + + AF+ +
Sbjct: 355 VLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMP 414
Query: 294 NIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ 353
+ + G+ N +A+ L ++ + D +G IL ACS L + + K+
Sbjct: 415 EKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLACSGLKSEKLIKE 474
Query: 354 VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGH 413
+H Y ++ G +D+ I A+V++Y + + +AR ++ I++ D+VS +M+T +G
Sbjct: 475 IHGYVLKGGL-ADILIQNAIVNVYGELALVDYARHVFESINSKDIVSWTSMITCCVHNGL 533
Query: 414 GKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTC 473
E + F ++ + PD I+ +S L A S+K G E +
Sbjct: 534 AIEALELFNSLIETNIEPDLITLVSVLYAAAALSSLKKGKEIHGFLIRKGFFLEGLIANS 593
Query: 474 MVDLLSRAGELGEA---YEFIKKIPMAPDSVMWGALLGGCVSHG 514
+VD+ +R G + A + ++K+ D ++W +++ HG
Sbjct: 594 LVDMYARCGTMENARNIFNYVKQ----RDLILWTSMINANGMHG 633
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 113/479 (23%), Positives = 207/479 (43%), Gaps = 71/479 (14%)
Query: 92 PNARTLSSVLPACARLQKLSLGKEFHG-YITRNGFMSNPFVVNGLVDVYRRCGDMLSALK 150
P + S L CA + L G++ H ++ ++ + F+ V +Y +CG A+K
Sbjct: 44 PLQQAYSQALELCASHKALPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDAVK 103
Query: 151 IFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSL 210
+F K S +R I +WN+MI V
Sbjct: 104 VFDKMS-----------------------------------ERTIFTWNAMIGACVSAGR 128
Query: 211 YDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGG 270
Y EA +++++ + G+ +FTF VL AC R G EIH +A+ G FV
Sbjct: 129 YVEAIELYKEMRVL-GVSLDAFTFPCVLKACGAFKERRLGCEIHGVAVKCGYGGFVFVCN 187
Query: 271 ALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWN--------------A 316
AL+ MY + DL A++ FD G M++D + +WN A
Sbjct: 188 ALIAMYAKCGDLGGARVLFDS--------GLMEKD----DPVSWNSIISAHVGEGESLEA 235
Query: 317 MQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDM 376
+ LF M + + + YT L AC ++ G+ +HA ++ + +DV++ AL+ M
Sbjct: 236 LSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVYVSNALIAM 295
Query: 377 YAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISF 436
YA CG ++ A +K + D VS N +L+ + + I HF+ + SG +PD +S
Sbjct: 296 YANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQVSV 355
Query: 437 LSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSR---AGELGEAYEFIKK 493
L+ ++A + ++ G E + + ++ ++D+ + +G A+E++ +
Sbjct: 356 LNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMPE 415
Query: 494 IPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSD 552
D + W ++ G + + R ++LE + ++ + L A +G S+
Sbjct: 416 ----KDLISWTTIIAG-YAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLACSGLKSE 469
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 159/363 (43%), Gaps = 40/363 (11%)
Query: 213 EAFS----MFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDT-F 267
EAF F D L P + L CA +L +G+++HA + D+ F
Sbjct: 24 EAFQSLTHFFTDPLPTTTRFPLQQAYSQALELCASHKALPQGQQLHAHFLKTQNYLDSVF 83
Query: 268 VGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAM---------- 317
+ V MY + A FD++ E ++TWNAM
Sbjct: 84 LDTKFVHMYGKCGSFYDAVKVFDKMS--------------ERTIFTWNAMIGACVSAGRY 129
Query: 318 ----QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTAL 373
+L+ EM L ++ D +T +L AC + G ++H A++CGY V + AL
Sbjct: 130 VEAIELYKEMRVLGVSLDAFTFPCVLKACGAFKERRLGCEIHGVAVKCGYGGFVFVCNAL 189
Query: 374 VDMYAKCGSLKHARLAYKR--ISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRP 431
+ MYAKCG L AR+ + + D VS N++++A+ G E ++ FRR+ G
Sbjct: 190 IAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISAHVGEGESLEALSLFRRMQEVGVES 249
Query: 432 DHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFI 491
+ +F+SAL AC IK G ++ + + ++ + + G++ +A
Sbjct: 250 NTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVYVSNALIAMYANCGQMEDAERVF 309
Query: 492 KKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPN-NTGNYVMLANLFAYAGRW 550
K + + D V W LL G V + + A + +++ + + V + N+ A +GR
Sbjct: 310 KSM-LFKDCVSWNTLLSGMVQN---DMYSDAINHFQDMQDSGQKPDQVSVLNMIAASGRS 365
Query: 551 SDL 553
++L
Sbjct: 366 ANL 368
>gi|359489486|ref|XP_002269573.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Vitis vinifera]
Length = 786
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 215/675 (31%), Positives = 327/675 (48%), Gaps = 120/675 (17%)
Query: 4 KCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETP--NLVS 61
KCG +DDA+K+F +MP+RD SWN+++ A A +G + EA L ETP + ++
Sbjct: 53 KCGRVDDARKLFDVMPDRDECSWNTMIGAYANSGRLNEA-------RKLFYETPIRSCIT 105
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
WS++I G+ + G D EA+ + + MQ EG PN T SVL C+ L GK+ H +
Sbjct: 106 WSSLISGYCRYGCDVEALELFWEMQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAI 165
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIK-NEVSCNTIIVGYCENGNVAEAR 180
+ F SN FVV GLVD+Y +C +L A +F K N V ++ GY +NG+ +A
Sbjct: 166 KTQFDSNAFVVTGLVDMYAKCKCILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAI 225
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
E F M RG +GIE FTF S+L A
Sbjct: 226 ECFRDM------RG------------------------------EGIECNQFTFPSILTA 249
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C +++ G ++H + G ++ FVG ALV+MY + DL A+ + +E + +
Sbjct: 250 CGSISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPVSW 309
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G A+ LF M + D +T +L+ S + M VH+ ++
Sbjct: 310 NSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSVLNCFSFVMDMRNAMSVHSLIVK 369
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
G+++ + ALVDMYAK G +A +++++ D++S +++T +G +E +
Sbjct: 370 TGFEAYKLVNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRL 429
Query: 421 FRRILASGFRPDHISFLSALSAC-----------VHAGSIKTG----------------- 452
F + G PD I + LSAC VHA +K+G
Sbjct: 430 FCEMRIMGIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAK 489
Query: 453 -------SEFFDLMAYYDV---------------------------------------KP 466
++ FD M DV KP
Sbjct: 490 CGCIEDANKVFDSMEIQDVITWTALIVGYAQNGRGRDHAGLVEHGRSYFQSMEEVYGIKP 549
Query: 467 SLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRL 526
+HY CM+DLL R+G+L EA E + ++ + PD+ +W ALL C HGN+E G+ AA+ L
Sbjct: 550 GPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATVWKALLAACRVHGNVELGERAANNL 609
Query: 527 IELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRAS 586
ELEP N YV+L+NL++ AG+W + A+TR+ MK R + K PGCSWIE ++H+F +
Sbjct: 610 FELEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLMKLRGVSKEPGCSWIEMSSKVHRFMSE 669
Query: 587 DRSHDRSEEIYTIID 601
DRSH R+ EIY+ +D
Sbjct: 670 DRSHPRTAEIYSKVD 684
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 126/426 (29%), Positives = 211/426 (49%), Gaps = 29/426 (6%)
Query: 104 CARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSC 163
C +L+ L ++ G + + N ++ +CG + A K+F ++E S
Sbjct: 16 CHQLEHTELNHHIRRFVNSCGTVHSSSDSNWVLSNLSKCGRVDDARKLFDVMPDRDECSW 75
Query: 164 NTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLM 223
NT+I Y +G + EAR+LF + R I+W+S+ISGY EA +F ++
Sbjct: 76 NTMIGAYANSGRLNEARKLFYETP----IRSCITWSSLISGYCRYGCDVEALELFWEM-Q 130
Query: 224 RDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLV 283
+G P FT+GSVL C+ L KGK+IHA AI S+ FV LV+MY + + ++
Sbjct: 131 YEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCIL 190
Query: 284 AAQMAFDEIENIEN-LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSAC 342
A+ F+ + N +L G+ N A++ F +M + + +T IL+AC
Sbjct: 191 EAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTAC 250
Query: 343 SSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQN 402
S++ G QVH +R G+ ++V +G+ALVDMY+KCG L +AR + + D VS N
Sbjct: 251 GSISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPVSWN 310
Query: 403 AMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSA-----------CVHAGSIKT 451
+M+ G G+E ++ FR + + D ++ S L+ VH+ +KT
Sbjct: 311 SMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSVLNCFSFVMDMRNAMSVHSLIVKT 370
Query: 452 GSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCV 511
G E + L+ +VD+ ++ G A++ +K+ D + W +L+ GCV
Sbjct: 371 GFEAYKLVN-----------NALVDMYAKRGYFDYAFDVFEKMT-DKDVISWTSLVTGCV 418
Query: 512 SHGNLE 517
+G+ E
Sbjct: 419 HNGSYE 424
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 97/418 (23%), Positives = 156/418 (37%), Gaps = 100/418 (23%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG L +A+++ + M D VSWNS++ C GL
Sbjct: 284 MYSKCGDLSNARRMLETMEVDDPVSWNSMIVGCVRQGL---------------------- 321
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
EEA+ + M ++ + T SVL + + + H I
Sbjct: 322 --------------GEEALSLFRIMHLRHMKIDEFTYPSVLNCFSFVMDMRNAMSVHSLI 367
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ GF + V N LVD+Y + G A +F K + K+ +S +++ G NG+ EA
Sbjct: 368 VKTGFEAYKLVNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEAL 427
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LF +M + GI P +VL A
Sbjct: 428 RLFCEMRIM------------------------------------GIHPDQIVIAAVLSA 451
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA++ L GK++HA + GL S V +LV MY + + A FD +E
Sbjct: 452 CAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDANKVFDSMEI------ 505
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
+V TW A+ + G++ S +ME Y I+
Sbjct: 506 --------QDVITWTALIVGYAQNGRGRD----HAGLVEHGRSYFQSMEE-----VYGIK 548
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST-PDLVSQNAMLTAYAMHGHGKEG 417
G + ++D+ + G L A+ +++ PD A+L A +HG+ + G
Sbjct: 549 PGPEHY----ACMIDLLGRSGKLMEAKELLNQMAVQPDATVWKALLAACRVHGNVELG 602
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 10/121 (8%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAAN-------GLVLEALECLERMSSLD 53
MY KCG ++DA KVF M +D ++W +++ A N GLV + M +
Sbjct: 486 MYAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQNGRGRDHAGLVEHGRSYFQSMEEVY 545
Query: 54 NETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLG 113
P ++ +I ++G EA +L +M ++P+A ++L AC + LG
Sbjct: 546 GIKPGPEHYACMIDLLGRSGKLMEAKELLNQM---AVQPDATVWKALLAACRVHGNVELG 602
Query: 114 K 114
+
Sbjct: 603 E 603
>gi|449470118|ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 208/657 (31%), Positives = 342/657 (52%), Gaps = 74/657 (11%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETP--- 57
MY K ++ A+++F+ +P D ++ +++TA A G LE + N TP
Sbjct: 57 MYCKSSNVVYARQLFEEIPNPDAIARTTLITAYCALG-------NLELGREIFNGTPLYM 109
Query: 58 -NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKE- 115
+ V ++A+I G+ NG A+ + M+ + P+ T +SVL A L +G E
Sbjct: 110 RDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTFTSVLSALV----LFVGNEQ 165
Query: 116 ----FHGYITRNGF-MSNPFVVNGLVDVYRR--------CGDMLSALKIFSKFSIKNEVS 162
H + + G + V+N L+ VY + C M+SA K+F + ++E++
Sbjct: 166 QCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRASELGIPCSAMVSARKLFDEMPKRDELT 225
Query: 163 CNTIIVGYCENGNVAEARELFDQM-EHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDL 221
T+I GY N ++ ARE+F+ M E+LG +WN+MISGYV + EA ++ R +
Sbjct: 226 WTTMITGYVRNDDLNGAREVFEAMVENLGA-----AWNAMISGYVHCGCFQEALTLCRKM 280
Query: 222 LMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSD-TF---VGGALVEMYC 277
GI+ T+ +++ ACA++ S + GK++HA + L + +F V AL+ +YC
Sbjct: 281 RFL-GIQFDDITYTTIISACANVGSFQMGKQMHAYILKNELNPNHSFCLSVSNALITLYC 339
Query: 278 RYQDLVAAQMAFDEIENIENLL------------GKMKE--------------------D 305
+ + A+ F + + N++ G+M+E
Sbjct: 340 KNNKVDEARKIFYAMP-VRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMIS 398
Query: 306 GFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDS 365
G N + ++LF +M P + L+ACS L +E G+Q+HA + GY+S
Sbjct: 399 GLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYES 458
Query: 366 DVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRIL 425
+ +G A++ MYAKCG ++ A + + + DLVS N+M+ A HGHG + I F ++L
Sbjct: 459 SLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQML 518
Query: 426 ASGFRPDHISFLSALSACVHAGSIKTGSEFFD-LMAYYDVKPSLKHYTCMVDLLSRAGEL 484
G PD I+FL+ L+AC HAG ++ G +F+ ++ Y + P HY MVDL RAG
Sbjct: 519 KEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFCRAGMF 578
Query: 485 GEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLF 544
A I +P P + +W ALL GC HGN++ G AA++L +L P N G YV+L+N++
Sbjct: 579 SYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQLFKLMPQNDGTYVLLSNIY 638
Query: 545 AYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
A GRW+D+A+ R+ M+D+ + K P CSWIE +++H F D H +Y ++
Sbjct: 639 ADVGRWNDVAKVRKLMRDQAVRKEPACSWIEVENKVHVFMVDDDVHPEVLSVYRYLE 695
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 112/482 (23%), Positives = 210/482 (43%), Gaps = 80/482 (16%)
Query: 110 LSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVG 169
SL + H ++ +GF +N L+++Y + +++ A ++F + + ++ T+I
Sbjct: 29 FSLARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNVVYARQLFEEIPNPDAIARTTLITA 88
Query: 170 YCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEP 229
YC GN+ RE+F+ R + +N+MI+GY N A +FR + RD P
Sbjct: 89 YCALGNLELGREIFNGTPLY--MRDSVFYNAMITGYAHNGDGHSALELFR-AMRRDDFRP 145
Query: 230 TSFTFGSVLIACA-DMNSLRKGKEIHALAIALGLQS-DTFVGGALVEMYCRYQD------ 281
FTF SVL A + + ++ ++H + G+ + V AL+ +Y +
Sbjct: 146 DDFTFTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRASELGIPC 205
Query: 282 --LVAAQMAFDEIENIENL------LGKMKEDG-------FEPNV----YTWNAM----- 317
+V+A+ FDE+ + L G ++ D FE V WNAM
Sbjct: 206 SAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYV 265
Query: 318 ---------QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSD-- 366
L +M L + D T I+SAC+++ + + GKQ+HAY ++ + +
Sbjct: 266 HCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQMHAYILKNELNPNHS 325
Query: 367 --VHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAY---------------- 408
+ + AL+ +Y K + AR + + ++++ NA+L+ Y
Sbjct: 326 FCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEM 385
Query: 409 ---------------AMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGS 453
A +G G EG+ F+++ GF P +F AL+AC G+++ G
Sbjct: 386 PVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGR 445
Query: 454 EFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSH 513
+ + + + SL M+ + ++ G + A +P + D V W +++ H
Sbjct: 446 QLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMP-SVDLVSWNSMIAALGQH 504
Query: 514 GN 515
G+
Sbjct: 505 GH 506
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 99/263 (37%), Gaps = 74/263 (28%)
Query: 324 LSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSL 383
L + L + Y + L + A+ + VHA+ I G+ H L++MY K ++
Sbjct: 5 LDIRLLANRYAEKLQLCSPQDPASFSLARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNV 64
Query: 384 KHARLAYKRISTPDLVSQ---------------------------------NAMLTAYAM 410
+AR ++ I PD +++ NAM+T YA
Sbjct: 65 VYARQLFEEIPNPDAIARTTLITAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAH 124
Query: 411 HGHGKEGIAHFRRILASGFRPDHISFLSALSACV------------HAGSIKTG------ 452
+G G + FR + FRPD +F S LSA V H +KTG
Sbjct: 125 NGDGHSALELFRAMRRDDFRPDDFTFTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSS 184
Query: 453 SEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELG-------EAYEFIKKIPMAPDSVMWGA 505
S L++ Y + RA ELG A + ++P D + W
Sbjct: 185 SVLNALLSVY---------------VKRASELGIPCSAMVSARKLFDEMP-KRDELTWTT 228
Query: 506 LLGGCVSHGNLEFGQIAADRLIE 528
++ G V + +L + + ++E
Sbjct: 229 MITGYVRNDDLNGAREVFEAMVE 251
>gi|449443492|ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Cucumis sativus]
Length = 678
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 175/521 (33%), Positives = 288/521 (55%), Gaps = 64/521 (12%)
Query: 90 LEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSAL 149
LEP S +L C L+KL G+ H +I + F + ++N ++++Y +CG +
Sbjct: 101 LEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSL---- 156
Query: 150 KIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNS 209
EA++LFD+M + ++SW +ISGY +
Sbjct: 157 ---------------------------EEAQDLFDKMP----TKDMVSWTVLISGYSQSG 185
Query: 210 LYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVG 269
EA ++F +L G +P FT S+L A S G+++HA ++ G + VG
Sbjct: 186 QASEALALFPKML-HLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVG 244
Query: 270 GALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNA------------- 316
+L++MY R+ + A++ F+ + NV +WNA
Sbjct: 245 SSLLDMYARWAHMREAKVIFNSLA--------------AKNVVSWNALIAGHARKGEGEH 290
Query: 317 -MQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVD 375
M+LF +ML P +T + +AC+S ++E+GK VHA+ I+ G +IG L+D
Sbjct: 291 VMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLID 350
Query: 376 MYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHIS 435
MYAK GS+K A+ ++R+ D+VS N++++ YA HG G E + F ++L + +P+ I+
Sbjct: 351 MYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEIT 410
Query: 436 FLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIP 495
FLS L+AC H+G + G +F+LM + ++ + H+ +VDLL RAG L EA +FI+++P
Sbjct: 411 FLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMP 470
Query: 496 MAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLAR 555
+ P + +WGALLG C H N++ G AA+++ EL+P+++G +V+L+N++A AGR SD A+
Sbjct: 471 IKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAK 530
Query: 556 TRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEI 596
R+ MK+ + K P CSW+E +E+H F A+D SH EEI
Sbjct: 531 VRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEI 571
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 109/419 (26%), Positives = 174/419 (41%), Gaps = 73/419 (17%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGSL++A+ +F MP +D +V
Sbjct: 149 MYAKCGSLEEAQDLFDKMPTKD------------------------------------MV 172
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ +I G++Q+G EA+ + +M G +PN TLSS+L A G++ H +
Sbjct: 173 SWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFS 232
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G+ N V + L+D+Y R M A IF+ + KN VS N +I G+ G
Sbjct: 233 LKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVM 292
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LF QM +R G EPT FT+ SV A
Sbjct: 293 RLFLQM------------------------------------LRQGFEPTHFTYSSVFTA 316
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA SL +GK +HA I G Q ++G L++MY + + A+ F + + +
Sbjct: 317 CASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSW 376
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G+ + A+QLF +ML + P+ T +L+ACS ++ G+ +
Sbjct: 377 NSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKK 436
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNAMLTAYAMHGHGKEGI 418
++ V +VD+ + G L A + + P A+L + MH + G+
Sbjct: 437 HKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGSCRMHKNMDLGV 495
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 156/295 (52%), Gaps = 1/295 (0%)
Query: 220 DLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRY 279
DL+ +EP + +L C + L++G+ IHA + + D + ++ MY +
Sbjct: 94 DLINCGSLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKC 153
Query: 280 QDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIIL 339
L AQ FD++ + + + G+ + A+ LF +ML L P+ +T+ +L
Sbjct: 154 GSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLL 213
Query: 340 SACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLV 399
A + + G+Q+HA++++ GYD +VH+G++L+DMYA+ ++ A++ + ++ ++V
Sbjct: 214 KASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVV 273
Query: 400 SQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM 459
S NA++ +A G G+ + F ++L GF P H ++ S +AC +GS++ G +
Sbjct: 274 SWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHV 333
Query: 460 AYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
+P ++D+ +++G + +A + +++ + D V W +++ G HG
Sbjct: 334 IKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRL-VKQDIVSWNSIISGYAQHG 387
>gi|297740529|emb|CBI30711.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 196/568 (34%), Positives = 304/568 (53%), Gaps = 47/568 (8%)
Query: 50 SSLDNETPN--LVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARL 107
S L +ET + + ++ I F + G A+ ++ + LE RT SVL CA L
Sbjct: 57 SVLPSETIDCKITDYNIEICRFCELGNLRRAMELINQSPKPDLE--LRTYCSVLQLCADL 114
Query: 108 QKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTII 167
+ + G+ H I N + + + LV +Y CGD+ +IF K + + N ++
Sbjct: 115 KSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLM 174
Query: 168 VGYCENGNVAEARELFDQMEHLGVQR--------------GIISWNSMISGYVDNSLYDE 213
GY + GN E+ LF +M LG++R +ISWNSMISGYV N L ++
Sbjct: 175 NGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEK 234
Query: 214 AFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALV 273
+F +L+ GI T SV + + L+
Sbjct: 235 GLDLFEQMLLL-GINTDLATMVSVELT---------------------------LNNCLL 266
Query: 274 EMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIY 333
+MY + +L +A F+ + + G+ + +++LF EM DL P+
Sbjct: 267 DMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEDLFPNSI 326
Query: 334 TVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRI 393
T+ IL AC+SLA +ERG+++H + +R G+ D H+ ALVDMY KCG+L ARL + I
Sbjct: 327 TMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMI 386
Query: 394 STPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGS 453
DLVS M+ Y MHG+G E IA F + SG PD +SF+S L AC H+G + G
Sbjct: 387 PEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGW 446
Query: 454 EFFDLMAYYD-VKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVS 512
FF++M ++P +HY C+VDLL+RAG L +AY+FIK +P+ PD+ +WGALL GC
Sbjct: 447 GFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRI 506
Query: 513 HGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCS 572
+ +++ + A+ + ELEP NTG YV+LAN++A A +W ++ + R+++ R + K+PGCS
Sbjct: 507 YHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLRKNPGCS 566
Query: 573 WIEDRDEIHKFRASDRSHDRSEEIYTII 600
WIE + ++H F D SH + +I ++
Sbjct: 567 WIEIKGKVHIFVTGDSSHPLANKIELLL 594
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 142/299 (47%), Gaps = 45/299 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G+L+ A +VF+ M ER VSW S
Sbjct: 268 MYSKSGNLNSAIQVFETMGERSVVSWTS-------------------------------- 295
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+I G+ + G + ++ + M+ E L PN+ T++ +LPACA L L G+E HG+I
Sbjct: 296 ----MIAGYAREGLSDMSVRLFHEMEKEDLFPNSITMACILPACASLAALERGQEIHGHI 351
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
RNGF + V N LVD+Y +CG + A +F K+ VS +I GY +G +EA
Sbjct: 352 LRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAI 411
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDG--IEPTSFTFGSVL 238
F++M + G++ +S+ S++ + L DE + F +MR+ IEP S + ++
Sbjct: 412 AAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFN--MMRNNCCIEPKSEHYACIV 469
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCR-YQDLVAAQMAFDEIENIE 296
A +L K + + ++ D + GAL+ CR Y D+ A+ + + +E
Sbjct: 470 DLLARAGNLSKA---YKFIKMMPIEPDATIWGALL-CGCRIYHDVKLAEKVAEHVFELE 524
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 98/420 (23%), Positives = 171/420 (40%), Gaps = 78/420 (18%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSL-------- 52
MY CG L + +++F + WN ++ A G E+L +RM L
Sbjct: 145 MYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESA 204
Query: 53 -----DNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARL 107
+ +++SW+++I G+ NG E+ + + +M G+ + T+ SV
Sbjct: 205 RKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSV------- 257
Query: 108 QKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTII 167
+L+L N L+D+Y + G++ SA+++F ++ VS ++I
Sbjct: 258 -ELTLN-------------------NCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMI 297
Query: 168 VGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGI 227
GY G + LF +ME ++ +
Sbjct: 298 AGYAREGLSDMSVRLFHEME------------------------------------KEDL 321
Query: 228 EPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQM 287
P S T +L ACA + +L +G+EIH + G D V ALV+MY + L A++
Sbjct: 322 FPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARL 381
Query: 288 AFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLAT 347
FD I + + + G+ + Y A+ F+EM + + PD + IL ACS
Sbjct: 382 LFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGL 441
Query: 348 MERGKQ-VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST-PDLVSQNAML 405
++ G + C + +VD+ A+ G+L A K + PD A+L
Sbjct: 442 LDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALL 501
>gi|195647336|gb|ACG43136.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 788
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 201/630 (31%), Positives = 324/630 (51%), Gaps = 42/630 (6%)
Query: 4 KCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWS 63
K G + A+++F MPE+ VS+ ++V A G V +A+E ER ++ ++
Sbjct: 161 KAGDIASARRLFYGMPEKSVVSYTTMVDALMKRGSVRDAVELYERC-----PLHSVAFFT 215
Query: 64 AVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITR- 122
A+I GF +N ++A + +M + PN TL V+ AC + L G +
Sbjct: 216 AMISGFVRNELHKDAFPVFRKMLTCSVRPNVVTLICVIKACVGAGEFDLAMGVVGLAVKC 275
Query: 123 NGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAREL 182
N F + V N L+ +Y R GD +A ++F +++ VS ++ Y + G++ AR +
Sbjct: 276 NLFEKSIEVHNSLITLYLRMGDAAAAHRVFDDMEVRDVVSWTALLDVYADLGDLYGARRV 335
Query: 183 FDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACA 242
D M R +SW ++I+ + EA ++ +L DG P F SVL ACA
Sbjct: 336 LDAMP----ARNEVSWGTLIARHEQKGDTAEALKLYSQMLA-DGCRPNISCFSSVLSACA 390
Query: 243 DMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL--- 299
+ LR G IHA A+ +G ++ FV +L++MYC+ + AQ F+ + +
Sbjct: 391 TLQDLRGGTRIHANALKMGSSTNLFVSSSLIDMYCKCKQCTYAQRVFNSLPEKNTVCWNS 450
Query: 300 --------GKMKE-DGF-----EPNVYTWN--------------AMQLFSEMLSLDLTPD 331
GKM E +G N +WN A+ F ML+ P
Sbjct: 451 LISGYSWNGKMVEAEGLFNKMPARNSVSWNTMISGYAENRRFGDALNYFYAMLASGHIPG 510
Query: 332 IYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYK 391
T+ +L AC++L ++E G+ VHA ++ G + ++ +GTAL DMYAK G L +R +
Sbjct: 511 EITLSSVLLACANLCSLEMGRMVHAEIVKLGIEDNIFMGTALSDMYAKSGDLDSSRRVFY 570
Query: 392 RISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKT 451
++ + ++ AM+ A +G +E I+ F ++ +G P+ +FL+ L AC H G ++
Sbjct: 571 QMPEKNNITWTAMVQGLAENGFAEESISLFEDMIENGIAPNEHTFLAILFACSHCGLVEQ 630
Query: 452 GSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCV 511
+F+ M + + P KHYTCMVD+L+RAG L EA E + K+ D+ W +LL C
Sbjct: 631 AIHYFETMQAHGIPPKSKHYTCMVDVLARAGCLPEAEELLMKVSSELDTSSWSSLLSACS 690
Query: 512 SHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGC 571
++ N E G+ AA +L ELE +NT YV+L+N++A G+W D A TR M+ + K GC
Sbjct: 691 TYRNKEIGERAAKKLHELEKDNTAGYVLLSNMYASCGKWKDAAETRILMQGASLKKDAGC 750
Query: 572 SWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
SW++ R + H F + H S EIY I+D
Sbjct: 751 SWLQLRGQYHAFFSWKEKHPLSLEIYEILD 780
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 132/418 (31%), Positives = 209/418 (50%), Gaps = 11/418 (2%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y + G A +VF M RD VSW +++ A G + A L+ M + N V
Sbjct: 291 LYLRMGDAAAAHRVFDDMEVRDVVSWTALLDVYADLGDLYGARRVLDAMPA-----RNEV 345
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW +I Q G EA+ + +M A+G PN SSVL ACA LQ L G H
Sbjct: 346 SWGTLIARHEQKGDTAEALKLYSQMLADGCRPNISCFSSVLSACATLQDLRGGTRIHANA 405
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G +N FV + L+D+Y +C A ++F+ KN V N++I GY NG + EA
Sbjct: 406 LKMGSSTNLFVSSSLIDMYCKCKQCTYAQRVFNSLPEKNTVCWNSLISGYSWNGKMVEAE 465
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LF++M R +SWN+MISGY +N + +A + F +L I P T SVL+A
Sbjct: 466 GLFNKMP----ARNSVSWNTMISGYAENRRFGDALNYFYAMLASGHI-PGEITLSSVLLA 520
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA++ SL G+ +HA + LG++ + F+G AL +MY + DL +++ F ++ N+
Sbjct: 521 CANLCSLEMGRMVHAEIVKLGIEDNIFMGTALSDMYAKSGDLDSSRRVFYQMPEKNNITW 580
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G N + ++ LF +M+ + P+ +T IL ACS +E+
Sbjct: 581 TAMVQGLAENGFAEESISLFEDMIENGIAPNEHTFLAILFACSHCGLVEQAIHYFETMQA 640
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTP-DLVSQNAMLTAYAMHGHGKEG 417
G T +VD+ A+ G L A ++S+ D S +++L+A + + + + G
Sbjct: 641 HGIPPKSKHYTCMVDVLARAGCLPEAEELLMKVSSELDTSSWSSLLSACSTYRNKEIG 698
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 115/484 (23%), Positives = 217/484 (44%), Gaps = 74/484 (15%)
Query: 127 SNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQM 186
++ F + +V + + GD+ SA ++F K+ VS T++ + G+V +A EL+++
Sbjct: 147 ASSFTYDFMVSEHVKAGDIASARRLFYGMPEKSVVSYTTMVDALMKRGSVRDAVELYERC 206
Query: 187 EHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNS 246
+ + +MISG+V N L+ +AF +FR +L + P T V+ AC
Sbjct: 207 P----LHSVAFFTAMISGFVRNELHKDAFPVFRKMLT-CSVRPNVVTLICVIKACVGAGE 261
Query: 247 LRKGKEIHALAIALGL-QSDTFVGGALVEMYCRYQDLVAAQMAFDEIE------------ 293
+ LA+ L + V +L+ +Y R D AA FD++E
Sbjct: 262 FDLAMGVVGLAVKCNLFEKSIEVHNSLITLYLRMGDAAAAHRVFDDMEVRDVVSWTALLD 321
Query: 294 ---NIENLLGKMKEDGFEP--NVYTW--------------NAMQLFSEMLSLDLTPDIYT 334
++ +L G + P N +W A++L+S+ML+ P+I
Sbjct: 322 VYADLGDLYGARRVLDAMPARNEVSWGTLIARHEQKGDTAEALKLYSQMLADGCRPNISC 381
Query: 335 VGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS 394
+LSAC++L + G ++HA A++ G +++ + ++L+DMY KC +A+ + +
Sbjct: 382 FSSVLSACATLQDLRGGTRIHANALKMGSSTNLFVSSSLIDMYCKCKQCTYAQRVFNSLP 441
Query: 395 TPDLVSQNAMLTAYAMHGHGKE---------------------GIAHFRR---------- 423
+ V N++++ Y+ +G E G A RR
Sbjct: 442 EKNTVCWNSLISGYSWNGKMVEAEGLFNKMPARNSVSWNTMISGYAENRRFGDALNYFYA 501
Query: 424 ILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGE 483
+LASG P I+ S L AC + S++ G + ++ ++ T + D+ +++G+
Sbjct: 502 MLASGHIPGEITLSSVLLACANLCSLEMGRMVHAEIVKLGIEDNIFMGTALSDMYAKSGD 561
Query: 484 LGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIE--LEPNNTGNYVMLA 541
L + ++P +++ W A++ G +G E + +IE + PN + LA
Sbjct: 562 LDSSRRVFYQMP-EKNNITWTAMVQGLAENGFAEESISLFEDMIENGIAPN---EHTFLA 617
Query: 542 NLFA 545
LFA
Sbjct: 618 ILFA 621
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 146/299 (48%), Gaps = 13/299 (4%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETP--N 58
MY KC A++VF +PE++ V WNS+++ + NG ++EA L N+ P N
Sbjct: 423 MYCKCKQCTYAQRVFNSLPEKNTVCWNSLISGYSWNGKMVEA-------EGLFNKMPARN 475
Query: 59 LVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHG 118
VSW+ +I G+ +N +A+ + M A G P TLSSVL ACA L L +G+ H
Sbjct: 476 SVSWNTMISGYAENRRFGDALNYFYAMLASGHIPGEITLSSVLLACANLCSLEMGRMVHA 535
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
I + G N F+ L D+Y + GD+ S+ ++F + KN ++ ++ G ENG E
Sbjct: 536 EIVKLGIEDNIFMGTALSDMYAKSGDLDSSRRVFYQMPEKNNITWTAMVQGLAENGFAEE 595
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
+ LF+ M G+ ++ +++ L ++A F + + GI P S + ++
Sbjct: 596 SISLFEDMIENGIAPNEHTFLAILFACSHCGLVEQAIHYF-ETMQAHGIPPKSKHYTCMV 654
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
A L + +E L + + + DT +L+ Y++ + A ++ +E
Sbjct: 655 DVLARAGCLPEAEE---LLMKVSSELDTSSWSSLLSACSTYRNKEIGERAAKKLHELEK 710
>gi|413933352|gb|AFW67903.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 788
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 201/630 (31%), Positives = 324/630 (51%), Gaps = 42/630 (6%)
Query: 4 KCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWS 63
K G + A+++F MPE+ VS+ ++V A G V +A+E ER ++ ++
Sbjct: 161 KAGDIASARRLFYGMPEKSVVSYTTMVDALMKRGSVRDAVELYERCP-----LHSVAFFT 215
Query: 64 AVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITR- 122
A+I GF +N ++A + +M + PN TL V+ AC + L G +
Sbjct: 216 AMISGFVRNELHKDAFTVFRKMLTCSVRPNVVTLICVIKACVGAGEFDLAMGVVGLAVKC 275
Query: 123 NGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAREL 182
N F + V N L+ +Y R GD +A ++F +++ VS ++ Y + G++ AR +
Sbjct: 276 NLFEKSIEVHNSLITLYLRMGDAAAARRVFDDMEVRDVVSWTALLDVYADLGDLDGARRV 335
Query: 183 FDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACA 242
D M R +SW ++I+ + EA ++ +L DG P F SVL ACA
Sbjct: 336 LDAMP----ARNEVSWGTLIARHEQKGDTAEALKLYSQMLA-DGCRPNISCFSSVLSACA 390
Query: 243 DMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL--- 299
+ LR G IHA A+ +G ++ FV +L++MYC+ + AQ F+ + +
Sbjct: 391 TLQDLRGGTRIHANALKMGSSTNLFVSSSLIDMYCKCKQCTYAQRVFNSLPEKNTVCWNS 450
Query: 300 --------GKMKE-DGF-----EPNVYTWN--------------AMQLFSEMLSLDLTPD 331
GKM E +G N +WN A+ F ML+ P
Sbjct: 451 LISGYSWNGKMVEAEGLFNKMPARNSVSWNTMISGYAENRRFGDALNYFYAMLASGHIPG 510
Query: 332 IYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYK 391
T+ +L AC++L ++E G+ VHA ++ G + ++ +GTAL DMYAK G L +R +
Sbjct: 511 EITLSSVLLACANLCSLEMGRMVHAEIVKLGIEDNIFMGTALCDMYAKSGDLDSSRRVFY 570
Query: 392 RISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKT 451
++ + ++ AM+ A +G +E I+ F ++ +G P+ +FL+ L AC H G ++
Sbjct: 571 QMPEKNNITWTAMVQGLAENGFAEESISLFEDMIENGIAPNEHTFLAILFACSHCGLVEQ 630
Query: 452 GSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCV 511
+F+ M + + P KHYTCMVD+L+RAG L EA E + K+ D+ W +LL C
Sbjct: 631 AIHYFETMQAHGIPPKSKHYTCMVDVLARAGCLPEAEELLMKVSSELDTSSWSSLLSACS 690
Query: 512 SHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGC 571
++ N E G+ AA +L ELE +NT YV+L+N++A G+W D A TR M+ + K GC
Sbjct: 691 TYRNKEIGERAAKKLHELEKDNTAGYVLLSNMYASCGKWKDAAETRILMQGASLKKDAGC 750
Query: 572 SWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
SW++ R + H F + H S EIY I+D
Sbjct: 751 SWLQLRGQYHAFFSWKEKHPLSLEIYEILD 780
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 132/418 (31%), Positives = 210/418 (50%), Gaps = 11/418 (2%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y + G A++VF M RD VSW +++ A G + A L+ M + N V
Sbjct: 291 LYLRMGDAAAARRVFDDMEVRDVVSWTALLDVYADLGDLDGARRVLDAMPA-----RNEV 345
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW +I Q G EA+ + +M A+G PN SSVL ACA LQ L G H
Sbjct: 346 SWGTLIARHEQKGDTAEALKLYSQMLADGCRPNISCFSSVLSACATLQDLRGGTRIHANA 405
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G +N FV + L+D+Y +C A ++F+ KN V N++I GY NG + EA
Sbjct: 406 LKMGSSTNLFVSSSLIDMYCKCKQCTYAQRVFNSLPEKNTVCWNSLISGYSWNGKMVEAE 465
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LF++M R +SWN+MISGY +N + +A + F +L I P T SVL+A
Sbjct: 466 GLFNKMP----ARNSVSWNTMISGYAENRRFGDALNYFYAMLASGHI-PGEITLSSVLLA 520
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA++ SL G+ +HA + LG++ + F+G AL +MY + DL +++ F ++ N+
Sbjct: 521 CANLCSLEMGRMVHAEIVKLGIEDNIFMGTALCDMYAKSGDLDSSRRVFYQMPEKNNITW 580
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G N + ++ LF +M+ + P+ +T IL ACS +E+
Sbjct: 581 TAMVQGLAENGFAEESISLFEDMIENGIAPNEHTFLAILFACSHCGLVEQAIHYFETMQA 640
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTP-DLVSQNAMLTAYAMHGHGKEG 417
G T +VD+ A+ G L A ++S+ D S +++L+A + + + + G
Sbjct: 641 HGIPPKSKHYTCMVDVLARAGCLPEAEELLMKVSSELDTSSWSSLLSACSTYRNKEIG 698
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 115/484 (23%), Positives = 219/484 (45%), Gaps = 74/484 (15%)
Query: 127 SNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQM 186
++ F + +V + + GD+ SA ++F K+ VS T++ + G+V +A EL+++
Sbjct: 147 ASSFTYDFMVSEHVKAGDIASARRLFYGMPEKSVVSYTTMVDALMKRGSVRDAVELYERC 206
Query: 187 EHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNS 246
+ + +MISG+V N L+ +AF++FR +L + P T V+ AC
Sbjct: 207 P----LHSVAFFTAMISGFVRNELHKDAFTVFRKMLT-CSVRPNVVTLICVIKACVGAGE 261
Query: 247 LRKGKEIHALAIALGL-QSDTFVGGALVEMYCRYQDLVAAQMAFDEIE------------ 293
+ LA+ L + V +L+ +Y R D AA+ FD++E
Sbjct: 262 FDLAMGVVGLAVKCNLFEKSIEVHNSLITLYLRMGDAAAARRVFDDMEVRDVVSWTALLD 321
Query: 294 ---NIENLLGKMKEDGFEP--NVYTW--------------NAMQLFSEMLSLDLTPDIYT 334
++ +L G + P N +W A++L+S+ML+ P+I
Sbjct: 322 VYADLGDLDGARRVLDAMPARNEVSWGTLIARHEQKGDTAEALKLYSQMLADGCRPNISC 381
Query: 335 VGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS 394
+LSAC++L + G ++HA A++ G +++ + ++L+DMY KC +A+ + +
Sbjct: 382 FSSVLSACATLQDLRGGTRIHANALKMGSSTNLFVSSSLIDMYCKCKQCTYAQRVFNSLP 441
Query: 395 TPDLVSQNAMLTAYAMHGHGKE---------------------GIAHFRR---------- 423
+ V N++++ Y+ +G E G A RR
Sbjct: 442 EKNTVCWNSLISGYSWNGKMVEAEGLFNKMPARNSVSWNTMISGYAENRRFGDALNYFYA 501
Query: 424 ILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGE 483
+LASG P I+ S L AC + S++ G + ++ ++ T + D+ +++G+
Sbjct: 502 MLASGHIPGEITLSSVLLACANLCSLEMGRMVHAEIVKLGIEDNIFMGTALCDMYAKSGD 561
Query: 484 LGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIE--LEPNNTGNYVMLA 541
L + ++P +++ W A++ G +G E + +IE + PN + LA
Sbjct: 562 LDSSRRVFYQMP-EKNNITWTAMVQGLAENGFAEESISLFEDMIENGIAPN---EHTFLA 617
Query: 542 NLFA 545
LFA
Sbjct: 618 ILFA 621
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 146/299 (48%), Gaps = 13/299 (4%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETP--N 58
MY KC A++VF +PE++ V WNS+++ + NG ++EA L N+ P N
Sbjct: 423 MYCKCKQCTYAQRVFNSLPEKNTVCWNSLISGYSWNGKMVEA-------EGLFNKMPARN 475
Query: 59 LVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHG 118
VSW+ +I G+ +N +A+ + M A G P TLSSVL ACA L L +G+ H
Sbjct: 476 SVSWNTMISGYAENRRFGDALNYFYAMLASGHIPGEITLSSVLLACANLCSLEMGRMVHA 535
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
I + G N F+ L D+Y + GD+ S+ ++F + KN ++ ++ G ENG E
Sbjct: 536 EIVKLGIEDNIFMGTALCDMYAKSGDLDSSRRVFYQMPEKNNITWTAMVQGLAENGFAEE 595
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
+ LF+ M G+ ++ +++ L ++A F + + GI P S + ++
Sbjct: 596 SISLFEDMIENGIAPNEHTFLAILFACSHCGLVEQAIHYF-ETMQAHGIPPKSKHYTCMV 654
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
A L + +E L + + + DT +L+ Y++ + A ++ +E
Sbjct: 655 DVLARAGCLPEAEE---LLMKVSSELDTSSWSSLLSACSTYRNKEIGERAAKKLHELEK 710
>gi|334185027|ref|NP_186882.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546764|sp|Q9FWA6.2|PP207_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g02330
gi|332640272|gb|AEE73793.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 903
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 189/567 (33%), Positives = 303/567 (53%), Gaps = 59/567 (10%)
Query: 53 DNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSL 112
++E N S++A+I G++Q + +A+ + R+ + GL + +LS V ACA ++ LS
Sbjct: 341 NSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSE 400
Query: 113 GKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCE 172
G + +G ++ + V N +D+Y +C +
Sbjct: 401 GLQIYGLAIKSSLSLDVCVANAAIDMYGKCQAL--------------------------- 433
Query: 173 NGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSF 232
AEA +FD+M +R +SWN++I+ + N E +F +L R IEP F
Sbjct: 434 ----AEAFRVFDEMR----RRDAVSWNAIIAAHEQNGKGYETLFLFVSML-RSRIEPDEF 484
Query: 233 TFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI 292
TFGS+L AC SL G EIH+ + G+ S++ VG +L++MY + + A+
Sbjct: 485 TFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRF 543
Query: 293 ENIENLLGKMKE------DGFEPNVYTWN--------------AMQLFSEMLSLDLTPDI 332
N+ G M+E + +WN A LF+ M+ + +TPD
Sbjct: 544 FQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDK 603
Query: 333 YTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKR 392
+T +L C++LA+ GKQ+HA I+ SDV+I + LVDMY+KCG L +RL +++
Sbjct: 604 FTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEK 663
Query: 393 ISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTG 452
D V+ NAM+ YA HG G+E I F R++ +P+H++F+S L AC H G I G
Sbjct: 664 SLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKG 723
Query: 453 SEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCV 511
E+F +M Y + P L HY+ MVD+L ++G++ A E I+++P D V+W LLG C
Sbjct: 724 LEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCT 783
Query: 512 SH-GNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPG 570
H N+E + A L+ L+P ++ Y +L+N++A AG W ++ R+ M+ ++ K PG
Sbjct: 784 IHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPG 843
Query: 571 CSWIEDRDEIHKFRASDRSHDRSEEIY 597
CSW+E +DE+H F D++H R EEIY
Sbjct: 844 CSWVELKDELHVFLVGDKAHPRWEEIY 870
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 139/541 (25%), Positives = 245/541 (45%), Gaps = 67/541 (12%)
Query: 11 AKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETP--NLVSWSAVIGG 68
A VF MP RD VSWN ++ + + + +A +S N P ++VSW++++ G
Sbjct: 102 ASMVFDKMPLRDVVSWNKMINGYSKSNDMFKA-------NSFFNMMPVRDVVSWNSMLSG 154
Query: 69 FTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSN 128
+ QNG ++I + M EG+E + RT + +L C+ L+ SLG + HG + R G ++
Sbjct: 155 YLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTD 214
Query: 129 PFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEH 188
+ L+D+Y + + +L++F KN VS
Sbjct: 215 VVAASALLDMYAKGKRFVESLRVFQGIPEKNSVS-------------------------- 248
Query: 189 LGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLL-MRDGIEPTSFTFGSVLIACADMNSL 247
W+++I+G V N+L A F+++ + G+ + + SVL +CA ++ L
Sbjct: 249 ---------WSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQS--IYASVLRSCAALSEL 297
Query: 248 RKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGF 307
R G ++HA A+ +D V A ++MY + ++ AQ+ FD EN+ G+
Sbjct: 298 RLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGY 357
Query: 308 EPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDV 367
+ + A+ LF ++S L D ++ + AC+ + + G Q++ AI+ DV
Sbjct: 358 SQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDV 417
Query: 368 HIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILAS 427
+ A +DMY KC +L A + + D VS NA++ A+ +G G E + F +L S
Sbjct: 418 CVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRS 477
Query: 428 GFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEA 487
PD +F S L AC GS+ G E + + + ++D+ S+ G + EA
Sbjct: 478 RIEPDEFTFGSILKACT-GGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEA 536
Query: 488 -------------------YEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIE 528
E + + V W +++ G V E Q+ R++E
Sbjct: 537 EKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMME 596
Query: 529 L 529
+
Sbjct: 597 M 597
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 119/424 (28%), Positives = 209/424 (49%), Gaps = 14/424 (3%)
Query: 96 TLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKF 155
S V CA+ L LGK+ H ++ +GF FV+N L+ VY D +SA +F K
Sbjct: 50 NFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKM 109
Query: 156 SIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAF 215
+++ VS N +I GY ++ ++ +A F+ M R ++SWNSM+SGY+ N ++
Sbjct: 110 PLRDVVSWNKMINGYSKSNDMFKANSFFNMMP----VRDVVSWNSMLSGYLQNGESLKSI 165
Query: 216 SMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEM 275
+F D + R+GIE TF +L C+ + G +IH + + +G +D AL++M
Sbjct: 166 EVFVD-MGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDM 224
Query: 276 YCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTV 335
Y + + V + F I ++ G N A++ F EM ++
Sbjct: 225 YAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIY 284
Query: 336 GIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST 395
+L +C++L+ + G Q+HA+A++ + +D + TA +DMYAKC +++ A++ +
Sbjct: 285 ASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSEN 344
Query: 396 PDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEF 455
+ S NAM+T Y+ HG + + F R+++SG D IS AC + G +
Sbjct: 345 LNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQI 404
Query: 456 FDLMAYYDVKPSLKHYTCM----VDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCV 511
+ L +K SL C+ +D+ + L EA+ ++ D+V W A++
Sbjct: 405 YGLA----IKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMR-RRDAVSWNAIIAAHE 459
Query: 512 SHGN 515
+G
Sbjct: 460 QNGK 463
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 118/402 (29%), Positives = 179/402 (44%), Gaps = 84/402 (20%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKC +L +A +VF M RD VSWN+++ A
Sbjct: 426 MYGKCQALAEAFRVFDEMRRRDAVSWNAIIAA---------------------------- 457
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
QNG E + + M +EP+ T S+L AC L G E H I
Sbjct: 458 --------HEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSI 508
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
++G SN V L+D+Y +CG + A KI S+F + NV+
Sbjct: 509 VKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRF---------------FQRANVSGTM 553
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
E ++M + +Q +SWNS+ISGYV ++A +F +M GI P FT+ +VL
Sbjct: 554 EELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTR-MMEMGITPDKFTYATVLDT 612
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA++ S GK+IHA I LQSD ++ LV+MY + DL +++ F
Sbjct: 613 CANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMF----------- 661
Query: 301 KMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSSLA 346
E + TWNAM QLF M+ ++ P+ T IL AC+ +
Sbjct: 662 ---EKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMG 718
Query: 347 TMERGKQVHAYAIRCGYDSDVHIG--TALVDMYAKCGSLKHA 386
+++G + + Y ++ Y D + + +VD+ K G +K A
Sbjct: 719 LIDKGLE-YFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRA 759
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 132/305 (43%), Gaps = 37/305 (12%)
Query: 184 DQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMR-DGIEPTSFTFGSVLIACA 242
+ + L + R ++S+N ++ + +FS F D L + + + T+F+F V CA
Sbjct: 3 ESLRLLHMTRSVVSFNRCLTEKISYRRV-PSFSYFTDFLNQVNSVSTTNFSF--VFKECA 59
Query: 243 DMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKM 302
+L GK+ HA I G + TFV L+++Y +D V+A M FD++ + +++
Sbjct: 60 KQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMP-LRDVVSWN 118
Query: 303 K--------EDGFEPN----------VYTWNAM--------------QLFSEMLSLDLTP 330
K D F+ N V +WN+M ++F +M +
Sbjct: 119 KMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEF 178
Query: 331 DIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAY 390
D T IIL CS L G Q+H +R G D+DV +AL+DMYAK + +
Sbjct: 179 DGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVF 238
Query: 391 KRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIK 450
+ I + VS +A++ + + F+ + + S L +C ++
Sbjct: 239 QGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELR 298
Query: 451 TGSEF 455
G +
Sbjct: 299 LGGQL 303
>gi|297811443|ref|XP_002873605.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319442|gb|EFH49864.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 750
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 185/599 (30%), Positives = 310/599 (51%), Gaps = 74/599 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +CGSL+DA K+F + MS L N V
Sbjct: 125 MYCECGSLEDADKLF-------------------------------DEMSDL-----NAV 148
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
S + +I + + G ++A+G+ RM G +P + +++L + + L +G++ H ++
Sbjct: 149 SRTTMISAYAEQGLLDKAVGLFSRMLESGDKPPSSMYTTLLKSLVNPRALDIGRQIHAHV 208
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R G SN + G+V++Y +CG ++ A ++F + ++K V+ ++VGY + G +A
Sbjct: 209 IRAGLCSNASIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVAWTGLMVGYTQAGRARDAL 268
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+LF VD L+ +G+E SF F VL A
Sbjct: 269 KLF----------------------VD--------------LITEGVEWDSFVFSVVLKA 292
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA + LR GK+IHA LGL+ + VG LV+ Y + +A AF EI ++
Sbjct: 293 CASLEELRFGKQIHACVAKLGLECEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSW 352
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLD-LTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
G+ A++ F + S + + + +T I ACS LA G QVHA AI
Sbjct: 353 SAIISGYCQMSQFEEAVKTFKSLRSKNAVVLNSFTYTSIFQACSVLADCNIGGQVHADAI 412
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
+ + +AL+ MY+KCG L A ++ + PD+V+ A ++ +A +G+ E +
Sbjct: 413 KRSLIGSQYGESALITMYSKCGCLDDAHEVFESMDNPDIVAWTAFISGHAYYGNASEALR 472
Query: 420 HFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMVDLL 478
F ++++ G +P+ ++F++ L+AC HAG ++ G + D M Y+V P++ HY CM+D+
Sbjct: 473 LFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHYLDTMLRKYNVAPTIDHYDCMIDIY 532
Query: 479 SRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYV 538
+R+G L EA F+K +P PD++ W L GC +H NLE G+IA + L +L+P +T YV
Sbjct: 533 ARSGLLDEALRFMKNMPFEPDAMSWKCFLSGCWTHKNLELGKIAGEELRQLDPEDTAGYV 592
Query: 539 MLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
+ NL+ +AG+W + A + M +R + K CSWI+++ +IH+F D+ H +S+EIY
Sbjct: 593 LPFNLYTWAGKWEEAAEVMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQSQEIY 651
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 121/499 (24%), Positives = 225/499 (45%), Gaps = 73/499 (14%)
Query: 69 FTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSN 128
+++G EA M G+ + + + AC L+ LS G+ H + R G + N
Sbjct: 56 LSKHGKLNEAFEFFQEMDKAGVSVSLYSYQCLFEACRELRSLSHGRLLHNRM-RMG-IEN 113
Query: 129 PFVV--NGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQM 186
P V+ N ++ +Y CG + A K+F + S N VS T+I Y E G + +A LF +M
Sbjct: 114 PSVLLQNCVLQMYCECGSLEDADKLFDEMSDLNAVSRTTMISAYAEQGLLDKAVGLFSRM 173
Query: 187 EHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNS 246
+ G +P S + ++L + + +
Sbjct: 174 ------------------------------------LESGDKPPSSMYTTLLKSLVNPRA 197
Query: 247 LRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDG 306
L G++IHA I GL S+ + +V MY + LV A+ FD++ + + G
Sbjct: 198 LDIGRQIHAHVIRAGLCSNASIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVAWTGLMVG 257
Query: 307 FEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSD 366
+ +A++LF ++++ + D + ++L AC+SL + GKQ+HA + G + +
Sbjct: 258 YTQAGRARDALKLFVDLITEGVEWDSFVFSVVLKACASLEELRFGKQIHACVAKLGLECE 317
Query: 367 VHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILA 426
V +GT LVD Y KC S + A A++ I P+ VS +A+++ Y +E + F+ + +
Sbjct: 318 VSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRS 377
Query: 427 -SGFRPDHISFLSALSAC-----------VHAGSIK---TGSEFFDLMAYYDVKPSLKHY 471
+ + ++ S AC VHA +IK GS++ +
Sbjct: 378 KNAVVLNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGE-------------- 423
Query: 472 TCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIE--L 529
+ ++ + S+ G L +A+E + + PD V W A + G +GN ++++ +
Sbjct: 424 SALITMYSKCGCLDDAHEVFESMD-NPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGM 482
Query: 530 EPNNTGNYVMLANLFAYAG 548
+PN+ ++ + ++AG
Sbjct: 483 KPNSV-TFIAVLTACSHAG 500
>gi|297832866|ref|XP_002884315.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330155|gb|EFH60574.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 861
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 208/684 (30%), Positives = 328/684 (47%), Gaps = 124/684 (18%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K ++ +VF+ +PE++ VSW++++ C N L+ AL+ + M ++
Sbjct: 182 MYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVN------- 234
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
G +Q+ Y +SVL +CA L +L LG + H +
Sbjct: 235 ------AGVSQSIY-----------------------ASVLRSCAALSELRLGGQLHAHA 265
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
++ F ++ V +D+Y +C +M A +F K N S N +I GY + + +A
Sbjct: 266 LKSDFAADGIVRTATLDMYAKCDNMQDAQILFDKSENLNRQSYNAMITGYSQEEHGFKAL 325
Query: 181 EL----------FDQMEHLGVQRG-------------------------IISWNSMISGY 205
L FD++ GV R + N+ I Y
Sbjct: 326 LLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYDLAIKSSLSLDVCVANAAIDMY 385
Query: 206 VDNSLYDEAFSMFRDLLMRDG------------------------------IEPTSFTFG 235
EAF +F ++ RD IEP FTFG
Sbjct: 386 GKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFG 445
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
SVL AC SL G EIH+ + G+ S++ VG +L++MY + + A+
Sbjct: 446 SVLKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQR 504
Query: 296 ENLLGKMKE------DGFEPNVYTWN--------------AMQLFSEMLSLDLTPDIYTV 335
N+ G M+E + +WN A LF+ M+ + +TPD +T
Sbjct: 505 TNVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTY 564
Query: 336 GIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST 395
+L C++LA+ GKQ+HA I+ SDV+I + LVDMY+KCG L +RL +++
Sbjct: 565 ATVLDTCANLASAGLGKQIHAQVIKKELQSDVYISSTLVDMYSKCGDLHDSRLMFEKSLR 624
Query: 396 PDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEF 455
D V+ NAM+ YA HG G+E I F R++ +P+H++F+S L AC H G I G E+
Sbjct: 625 RDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEY 684
Query: 456 FDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSH- 513
F +M Y + P L HY+ MVD+L ++G++ A E I+++P D V+W LLG C H
Sbjct: 685 FYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHR 744
Query: 514 GNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSW 573
N+E + A L+ L+P ++ Y +L+N++A AG W ++ R+ M+ ++ K PGCSW
Sbjct: 745 NNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSW 804
Query: 574 IEDRDEIHKFRASDRSHDRSEEIY 597
+E +DE+H F D++H R EEIY
Sbjct: 805 VELKDELHVFLVGDKAHPRWEEIY 828
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 117/416 (28%), Positives = 207/416 (49%), Gaps = 14/416 (3%)
Query: 104 CARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSC 163
CA+ L LGK+ H ++ +GF FV+N L+ VY D +SA +F + +++ VS
Sbjct: 16 CAKQGALELGKQAHAHMILSGFRPTTFVLNCLLQVYTNSRDFVSASMVFDRMPLRDVVSW 75
Query: 164 NTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLM 223
N +I GY ++ N+ +A F+ M R ++SWNSM+SGY+ N ++ +F D +
Sbjct: 76 NKMINGYAKSNNMVKASFFFNMMP----VRDVVSWNSMLSGYLQNGETLKSIEVFVD-MG 130
Query: 224 RDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLV 283
R G E TF +L C+ + G +IH + + +G +D AL++MY + + V
Sbjct: 131 RAGTEFDGRTFAIILKVCSCLEDTSLGMQIHGVVVRVGCDTDVVAASALLDMYAKGKRFV 190
Query: 284 AAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACS 343
+ F I ++ G N A++ F EM ++ +L +C+
Sbjct: 191 ESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCA 250
Query: 344 SLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNA 403
+L+ + G Q+HA+A++ + +D + TA +DMYAKC +++ A++ + + + S NA
Sbjct: 251 ALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDKSENLNRQSYNA 310
Query: 404 MLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYD 463
M+T Y+ HG + + F R+++SG D IS AC + G + +DL
Sbjct: 311 MITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYDLA---- 366
Query: 464 VKPSLKHYTCM----VDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
+K SL C+ +D+ + L EA+ ++ D+V W A++ +G
Sbjct: 367 IKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMR-RRDAVSWNAIIAAHEQNGK 421
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 139/541 (25%), Positives = 247/541 (45%), Gaps = 67/541 (12%)
Query: 11 AKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETP--NLVSWSAVIGG 68
A VF MP RD VSWN ++ A + +++A S N P ++VSW++++ G
Sbjct: 60 ASMVFDRMPLRDVVSWNKMINGYAKSNNMVKA-------SFFFNMMPVRDVVSWNSMLSG 112
Query: 69 FTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSN 128
+ QNG ++I + M G E + RT + +L C+ L+ SLG + HG + R G ++
Sbjct: 113 YLQNGETLKSIEVFVDMGRAGTEFDGRTFAIILKVCSCLEDTSLGMQIHGVVVRVGCDTD 172
Query: 129 PFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEH 188
+ L+D+Y + + +L++F KN VS
Sbjct: 173 VVAASALLDMYAKGKRFVESLRVFQGIPEKNSVS-------------------------- 206
Query: 189 LGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLL-MRDGIEPTSFTFGSVLIACADMNSL 247
W+++I+G V N+L A F+++ + G+ + + SVL +CA ++ L
Sbjct: 207 ---------WSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQS--IYASVLRSCAALSEL 255
Query: 248 RKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGF 307
R G ++HA A+ +D V A ++MY + ++ AQ+ FD+ EN+ G+
Sbjct: 256 RLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDKSENLNRQSYNAMITGY 315
Query: 308 EPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDV 367
+ + A+ LF ++S L D ++ + AC+ + + G Q++ AI+ DV
Sbjct: 316 SQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYDLAIKSSLSLDV 375
Query: 368 HIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILAS 427
+ A +DMY KC +L A + + D VS NA++ A+ +G G E + F +L S
Sbjct: 376 CVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRS 435
Query: 428 GFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEA 487
PD +F S L AC GS+ G E + + + ++D+ S+ G + EA
Sbjct: 436 RIEPDEFTFGSVLKACT-GGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEA 494
Query: 488 YE----FIKKIPMAPD---------------SVMWGALLGGCVSHGNLEFGQIAADRLIE 528
+ F ++ ++ V W +++ G V E Q+ R++E
Sbjct: 495 EKIHSRFFQRTNVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMME 554
Query: 529 L 529
+
Sbjct: 555 M 555
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 100/248 (40%), Gaps = 31/248 (12%)
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
+ CA +L GK+ HA I G + TFV L+++Y +D V+A M FD + + +
Sbjct: 14 VECAKQGALELGKQAHAHMILSGFRPTTFVLNCLLQVYTNSRDFVSASMVFDRMPLRDVV 73
Query: 299 LGKMKEDGFEP-----------------NVYTWNAM--------------QLFSEMLSLD 327
+G+ +V +WN+M ++F +M
Sbjct: 74 SWNKMINGYAKSNNMVKASFFFNMMPVRDVVSWNSMLSGYLQNGETLKSIEVFVDMGRAG 133
Query: 328 LTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHAR 387
D T IIL CS L G Q+H +R G D+DV +AL+DMYAK +
Sbjct: 134 TEFDGRTFAIILKVCSCLEDTSLGMQIHGVVVRVGCDTDVVAASALLDMYAKGKRFVESL 193
Query: 388 LAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAG 447
++ I + VS +A++ + + F+ + + S L +C
Sbjct: 194 RVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALS 253
Query: 448 SIKTGSEF 455
++ G +
Sbjct: 254 ELRLGGQL 261
>gi|356495778|ref|XP_003516750.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
chloroplastic-like [Glycine max]
Length = 765
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 182/556 (32%), Positives = 295/556 (53%), Gaps = 65/556 (11%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
+L SWS +I +T+ G +EA+ + RM G+ PN+ S+++ + L LGK+ H
Sbjct: 156 DLSSWSTIISAYTEEGRIDEAVRLFLRMLDLGITPNSSIFSTLIMSFTDPSMLDLGKQIH 215
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
+ R GF +N + + ++Y +CG + A +K + KN V+C ++VGY +
Sbjct: 216 SQLIRIGFAANISIETLISNMYVKCGWLDGAEVATNKMTRKNAVACTGLMVGYTKAARNR 275
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
+A LF +M + +G+E F F +
Sbjct: 276 DALLLFGKM------------------------------------ISEGVELDGFVFSII 299
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
L ACA + L GK+IH+ I LGL+S+ VG LV+ Y + AA+ AF+ I
Sbjct: 300 LKACAALGDLYTGKQIHSYCIKLGLESEVSVGTPLVDFYVKCARFEAARQAFESIH---- 355
Query: 298 LLGKMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACS 343
EPN ++W+A+ ++F + S + + + I ACS
Sbjct: 356 ----------EPNDFSWSALIAGYCQSGQFDRALEVFKAIRSKGVLLNSFIYTNIFQACS 405
Query: 344 SLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNA 403
+++ + G Q+HA AI+ G + + +A++ MY+KCG + +A A+ I PD V+ A
Sbjct: 406 AVSDLICGAQIHADAIKKGLVAYLSGESAMISMYSKCGQVDYAHQAFLTIDKPDTVAWTA 465
Query: 404 MLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YY 462
++ A+A HG E + F+ + SG RP+ ++F+ L+AC H+G +K G + D M+ Y
Sbjct: 466 IICAHAYHGKAFEALRLFKEMQGSGVRPNAVTFIGLLNACSHSGLVKEGKKILDSMSDEY 525
Query: 463 DVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIA 522
V P++ HY CM+D+ SRAG L EA E I+ +P PD + W +LLGGC SH NLE G IA
Sbjct: 526 GVNPTIDHYNCMIDVYSRAGLLQEALEVIRSLPFEPDVMSWKSLLGGCWSHRNLEIGMIA 585
Query: 523 ADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHK 582
AD + L+P ++ YV++ NL+A AG+W + A+ R+ M +R + K CSWI + ++H+
Sbjct: 586 ADNIFRLDPLDSATYVIMFNLYALAGKWDEAAQFRKMMAERNLRKEVSCSWIIVKGKVHR 645
Query: 583 FRASDRSHDRSEEIYT 598
F DR H ++E+IY+
Sbjct: 646 FVVGDRHHPQTEQIYS 661
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 123/459 (26%), Positives = 203/459 (44%), Gaps = 64/459 (13%)
Query: 69 FTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSN 128
+ G E + M G+ N R+ + C L LS GK FH + R SN
Sbjct: 67 LAKQGNLREVHEFIRNMDKVGISINPRSYEYLFKMCGTLGALSDGKLFHNRLQRMA-NSN 125
Query: 129 PFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEH 188
F+ N ++ +Y C SA + F K ++ S +TII Y E G + EA LF +M
Sbjct: 126 KFIDNCILKMYCDCKSFTSAERFFDKIVDQDLSSWSTIISAYTEEGRIDEAVRLFLRMLD 185
Query: 189 LGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLR 248
LG+ P S F +++++ D + L
Sbjct: 186 LGIT------------------------------------PNSSIFSTLIMSFTDPSMLD 209
Query: 249 KGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI--ENIENLLGKMKEDG 306
GK+IH+ I +G ++ + + MY + L A++A +++ +N G M G
Sbjct: 210 LGKQIHSQLIRIGFAANISIETLISNMYVKCGWLDGAEVATNKMTRKNAVACTGLMV--G 267
Query: 307 FEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSD 366
+ +A+ LF +M+S + D + IIL AC++L + GKQ+H+Y I+ G +S+
Sbjct: 268 YTKAARNRDALLLFGKMISEGVELDGFVFSIILKACAALGDLYTGKQIHSYCIKLGLESE 327
Query: 367 VHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILA 426
V +GT LVD Y KC + AR A++ I P+ S +A++ Y G + F+ I +
Sbjct: 328 VSVGTPLVDFYVKCARFEAARQAFESIHEPNDFSWSALIAGYCQSGQFDRALEVFKAIRS 387
Query: 427 SGFRPDHISFLSALSAC-----------VHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMV 475
G + + + AC +HA +IK G L+AY L + M+
Sbjct: 388 KGVLLNSFIYTNIFQACSAVSDLICGAQIHADAIKKG-----LVAY------LSGESAMI 436
Query: 476 DLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
+ S+ G++ A++ I PD+V W A++ HG
Sbjct: 437 SMYSKCGQVDYAHQAFLTID-KPDTVAWTAIICAHAYHG 474
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 146/337 (43%), Gaps = 26/337 (7%)
Query: 227 IEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQ 286
I P S+ + + C + +L GK H + S+ F+ +++MYC + +A+
Sbjct: 90 INPRSYEY--LFKMCGTLGALSDGKLFHNRLQRMA-NSNKFIDNCILKMYCDCKSFTSAE 146
Query: 287 MAFDEIENIE-----NLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSA 341
FD+I + + ++ E+G A++LF ML L +TP+ ++ +
Sbjct: 147 RFFDKIVDQDLSSWSTIISAYTEEG-----RIDEAVRLFLRMLDLGITPNSSIFSTLIMS 201
Query: 342 CSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQ 401
+ + ++ GKQ+H+ IR G+ +++ I T + +MY KCG L A +A +++ + V+
Sbjct: 202 FTDPSMLDLGKQIHSQLIRIGFAANISIETLISNMYVKCGWLDGAEVATNKMTRKNAVAC 261
Query: 402 NAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY 461
++ Y ++ + F ++++ G D F L AC G + TG +
Sbjct: 262 TGLMVGYTKAARNRDALLLFGKMISEGVELDGFVFSIILKACAALGDLYTGKQIHSYCIK 321
Query: 462 YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQI 521
++ + T +VD + A + + I P+ W AL+ G G
Sbjct: 322 LGLESEVSVGTPLVDFYVKCARFEAARQAFESIH-EPNDFSWSALIAGYCQSGQF----- 375
Query: 522 AADRLIELEPNNTGNYVML-----ANLFAYAGRWSDL 553
DR +E+ V+L N+F SDL
Sbjct: 376 --DRALEVFKAIRSKGVLLNSFIYTNIFQACSAVSDL 410
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 85/174 (48%)
Query: 57 PNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEF 116
PN SWSA+I G+ Q+G + A+ + ++++G+ N+ +++ AC+ + L G +
Sbjct: 357 PNDFSWSALIAGYCQSGQFDRALEVFKAIRSKGVLLNSFIYTNIFQACSAVSDLICGAQI 416
Query: 117 HGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNV 176
H + G ++ + ++ +Y +CG + A + F + V+ II + +G
Sbjct: 417 HADAIKKGLVAYLSGESAMISMYSKCGQVDYAHQAFLTIDKPDTVAWTAIICAHAYHGKA 476
Query: 177 AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPT 230
EA LF +M+ GV+ +++ +++ + L E + + G+ PT
Sbjct: 477 FEALRLFKEMQGSGVRPNAVTFIGLLNACSHSGLVKEGKKILDSMSDEYGVNPT 530
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 73/174 (41%), Gaps = 41/174 (23%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG +D A + F + + D V+W +++ A A +G EAL
Sbjct: 438 MYSKCGQVDYAHQAFLTIDKPDTVAWTAIICAHAYHGKAFEALR---------------- 481
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFR-MQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
LF+ MQ G+ PNA T +L AC+ + GK+
Sbjct: 482 ---------------------LFKEMQGSGVRPNAVTFIGLLNACSHSGLVKEGKKILDS 520
Query: 120 ITRNGFMSNPFV--VNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYC 171
++ + + NP + N ++DVY R G + AL++ + +V ++G C
Sbjct: 521 MS-DEYGVNPTIDHYNCMIDVYSRAGLLQEALEVIRSLPFEPDVMSWKSLLGGC 573
>gi|255574235|ref|XP_002528032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532562|gb|EEF34350.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 730
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 187/559 (33%), Positives = 295/559 (52%), Gaps = 33/559 (5%)
Query: 60 VSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
+ W+ +I + +NG EA+ +M +G+ P+ T SVL AC ++ GK+ H
Sbjct: 160 LPWNLLISSYVRNGLHGEALSAYKQMTHKGIRPDKFTYPSVLKACGEKLDIAFGKKLHAS 219
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
I + N FV N LV +Y + G++ +A +F +++VS NT+I GY G EA
Sbjct: 220 INASCLGWNLFVHNSLVSMYAKTGELSTARCLFENMLERDDVSWNTMISGYASKGMWKEA 279
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRD-GIEPTSFTFGSVL 238
ELF +M G++ II+WN++ G V + ++EA + MR GI+ S L
Sbjct: 280 FELFGKMRVEGIELNIITWNTIAGGCVQSGNFEEALELLSH--MRSYGIDMDSVATIIGL 337
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
AC+ + +++ G+EIH AI V AL+ MY R + L A F
Sbjct: 338 GACSHIGAIKLGREIHGSAIRSFYDGVDNVKNALITMYSRCKYLRHAYNLFQSTRT---- 393
Query: 299 LGKMKEDGFEPNVYTWNAMQ--------------LFSEMLSLDLTPDIYTVGIILSACSS 344
N+ TWN+M LF EML + P+ T+ IL C+
Sbjct: 394 ----------KNIITWNSMLSGYTHMDRSEEASFLFREMLLSGIEPNYVTIASILPLCAR 443
Query: 345 LATMERGKQVHAYAIR-CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNA 403
+A ++ GK+ H Y +R G+ + + +LVDMYA+ G + A+ + IS D V+ +
Sbjct: 444 VANLQHGKEFHCYILRRAGFKDYLLLWNSLVDMYARSGKVLEAKRLFDSISRRDEVTYTS 503
Query: 404 MLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYY 462
++ Y + G G+E + F + +PDH++ ++ LSAC H+G + G + F+LM + Y
Sbjct: 504 LIAGYGIQGEGREALKLFDEMKKRHIKPDHVTMVAVLSACSHSGLVTEGIKLFELMPSAY 563
Query: 463 DVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIA 522
+ P L+H+ CMVDL RAG L +A E I ++P P S MW LLG C HGN E G+ A
Sbjct: 564 GIIPRLEHFACMVDLFGRAGLLHKAKEMITRMPYRPSSAMWATLLGACRIHGNAEIGEWA 623
Query: 523 ADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHK 582
A++L+E+ P N+G YV++AN++A AG WS LA+ R M+D + K+PGC+W++
Sbjct: 624 AEKLLEMRPENSGYYVLIANMYAAAGCWSKLAKVRTYMRDLGVRKAPGCAWVDVGSGFFP 683
Query: 583 FRASDRSHDRSEEIYTIID 601
F D S ++Y +++
Sbjct: 684 FLVDDTSKPHVNKLYPLLE 702
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 139/543 (25%), Positives = 222/543 (40%), Gaps = 120/543 (22%)
Query: 107 LQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTI 166
L+ LS GK+ H I GF +P +V LV Y + A I +I + + N +
Sbjct: 106 LKSLSQGKQLHTLIISLGFEQHPIIVPKLVTFYTNFDLLADAHTITENSNILHPLPWNLL 165
Query: 167 IVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDG 226
I Y NG EA + QM H G
Sbjct: 166 ISSYVRNGLHGEALSAYKQMTH------------------------------------KG 189
Query: 227 IEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQ 286
I P FT+ SVL AC + + GK++HA A L + FV +LV MY + +L A+
Sbjct: 190 IRPDKFTYPSVLKACGEKLDIAFGKKLHASINASCLGWNLFVHNSLVSMYAKTGELSTAR 249
Query: 287 MAFDEIENIEN---------------------LLGKMKEDGFEPNVYTWN---------- 315
F+ + ++ L GKM+ +G E N+ TWN
Sbjct: 250 CLFENMLERDDVSWNTMISGYASKGMWKEAFELFGKMRVEGIELNIITWNTIAGGCVQSG 309
Query: 316 ----AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGT 371
A++L S M S + D I L ACS + ++ G+++H AIR YD ++
Sbjct: 310 NFEEALELLSHMRSYGIDMDSVATIIGLGACSHIGAIKLGREIHGSAIRSFYDGVDNVKN 369
Query: 372 ALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRP 431
AL+ MY++C L+HA ++ T ++++ N+ML+ Y +E FR +L SG P
Sbjct: 370 ALITMYSRCKYLRHAYNLFQSTRTKNIITWNSMLSGYTHMDRSEEASFLFREMLLSGIEP 429
Query: 432 DHISFLSALSACVHAGSIKTGSEFF-DLMAYYDVKPSLKHYTCMVDLLSRAGELGEA--- 487
++++ S L C +++ G EF ++ K L + +VD+ +R+G++ EA
Sbjct: 430 NYVTIASILPLCARVANLQHGKEFHCYILRRAGFKDYLLLWNSLVDMYARSGKVLEAKRL 489
Query: 488 -------------------------------YEFIKKIPMAPDSVMWGALLGGCVSHGNL 516
++ +KK + PD V A+L C SH L
Sbjct: 490 FDSISRRDEVTYTSLIAGYGIQGEGREALKLFDEMKKRHIKPDHVTMVAVLSAC-SHSGL 548
Query: 517 EFGQIAADRLIELEPNNTG------NYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPG 570
I +L EL P+ G ++ + +LF AG L ++M R ++
Sbjct: 549 VTEGI---KLFELMPSAYGIIPRLEHFACMVDLFGRAG----LLHKAKEMITRMPYRPSS 601
Query: 571 CSW 573
W
Sbjct: 602 AMW 604
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 118/436 (27%), Positives = 202/436 (46%), Gaps = 42/436 (9%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G L A+ +F+ M ERD VSWN++++ A+ G+ EA E +M ++ N++
Sbjct: 238 MYAKTGELSTARCLFENMLERDDVSWNTMISGYASKGMWKEAFELFGKMR-VEGIELNII 296
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+ + GG Q+G EEA+ +L M++ G++ ++ L AC+ + + LG+E HG
Sbjct: 297 TWNTIAGGCVQSGNFEEALELLSHMRSYGIDMDSVATIIGLGACSHIGAIKLGREIHGSA 356
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R+ + V N L+ +Y RC + A +F KN ++ N+++ GY
Sbjct: 357 IRSFYDGVDNVKNALITMYSRCKYLRHAYNLFQSTRTKNIITWNSMLSGYT--------- 407
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
++D S +EA +FR++L+ GIEP T S+L
Sbjct: 408 ------------------------HMDRS--EEASFLFREMLL-SGIEPNYVTIASILPL 440
Query: 241 CADMNSLRKGKEIHALAI-ALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
CA + +L+ GKE H + G + + +LV+MY R ++ A+ FD I + +
Sbjct: 441 CARVANLQHGKEFHCYILRRAGFKDYLLLWNSLVDMYARSGKVLEAKRLFDSISRRDEVT 500
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG-KQVHAYA 358
G+ A++LF EM + PD T+ +LSACS + G K
Sbjct: 501 YTSLIAGYGIQGEGREALKLFDEMKKRHIKPDHVTMVAVLSACSHSGLVTEGIKLFELMP 560
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNAMLTAYAMHGHGKEG 417
G + +VD++ + G L A+ R+ P +L A +HG+ + G
Sbjct: 561 SAYGIIPRLEHFACMVDLFGRAGLLHKAKEMITRMPYRPSSAMWATLLGACRIHGNAEIG 620
Query: 418 IAHFRRILASGFRPDH 433
++L RP++
Sbjct: 621 EWAAEKLLE--MRPEN 634
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 102/440 (23%), Positives = 177/440 (40%), Gaps = 70/440 (15%)
Query: 164 NTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLM 223
N I+G C++GN + L + ++ Q ++ +AF F L+
Sbjct: 38 NYPILGECKSGNESMIENLVNSLKGFASQGNLL----------------KAFKTF-SLIQ 80
Query: 224 RDGIEPTS-----FTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCR 278
R TS + S+L++C ++ SL +GK++H L I+LG + + LV Y
Sbjct: 81 RHASCSTSDDVVLHSVSSLLLSCVNLKSLSQGKQLHTLIISLGFEQHPIIVPKLVTFYTN 140
Query: 279 YQDLVAAQMAFDEIENI-ENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGI 337
+ DL+A E NI L + + N A+ + +M + PD +T
Sbjct: 141 F-DLLADAHTITENSNILHPLPWNLLISSYVRNGLHGEALSAYKQMTHKGIRPDKFTYPS 199
Query: 338 ILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPD 397
+L AC + GK++HA ++ + +LV MYAK G L AR ++ + D
Sbjct: 200 VLKACGEKLDIAFGKKLHASINASCLGWNLFVHNSLVSMYAKTGELSTARCLFENMLERD 259
Query: 398 LVSQNAMLTAYAMHGHGKEGIAHFRRILASGFR--------------------------- 430
VS N M++ YA G KE F ++ G
Sbjct: 260 DVSWNTMISGYASKGMWKEAFELFGKMRVEGIELNIITWNTIAGGCVQSGNFEEALELLS 319
Query: 431 --------PDHISFLSALSACVHAGSIKTGSEFFD--LMAYYDVKPSLKHYTCMVDLLSR 480
D ++ + L AC H G+IK G E + ++YD ++K+ ++ + SR
Sbjct: 320 HMRSYGIDMDSVATIIGLGACSHIGAIKLGREIHGSAIRSFYDGVDNVKN--ALITMYSR 377
Query: 481 AGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLI--ELEPNNTGNYV 538
L AY + + + W ++L G E ++ +EP NYV
Sbjct: 378 CKYLRHAYNLFQST-RTKNIITWNSMLSGYTHMDRSEEASFLFREMLLSGIEP----NYV 432
Query: 539 MLANLFAYAGRWSDLARTRQ 558
+A++ R ++L ++
Sbjct: 433 TIASILPLCARVANLQHGKE 452
>gi|10092182|gb|AAG12601.1|AC068900_7 hypothetical protein; 7123-4412 [Arabidopsis thaliana]
Length = 861
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 189/567 (33%), Positives = 303/567 (53%), Gaps = 59/567 (10%)
Query: 53 DNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSL 112
++E N S++A+I G++Q + +A+ + R+ + GL + +LS V ACA ++ LS
Sbjct: 299 NSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSE 358
Query: 113 GKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCE 172
G + +G ++ + V N +D+Y +C +
Sbjct: 359 GLQIYGLAIKSSLSLDVCVANAAIDMYGKCQAL--------------------------- 391
Query: 173 NGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSF 232
AEA +FD+M +R +SWN++I+ + N E +F +L R IEP F
Sbjct: 392 ----AEAFRVFDEMR----RRDAVSWNAIIAAHEQNGKGYETLFLFVSML-RSRIEPDEF 442
Query: 233 TFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI 292
TFGS+L AC SL G EIH+ + G+ S++ VG +L++MY + + A+
Sbjct: 443 TFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRF 501
Query: 293 ENIENLLGKMKE------DGFEPNVYTWN--------------AMQLFSEMLSLDLTPDI 332
N+ G M+E + +WN A LF+ M+ + +TPD
Sbjct: 502 FQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDK 561
Query: 333 YTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKR 392
+T +L C++LA+ GKQ+HA I+ SDV+I + LVDMY+KCG L +RL +++
Sbjct: 562 FTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEK 621
Query: 393 ISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTG 452
D V+ NAM+ YA HG G+E I F R++ +P+H++F+S L AC H G I G
Sbjct: 622 SLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKG 681
Query: 453 SEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCV 511
E+F +M Y + P L HY+ MVD+L ++G++ A E I+++P D V+W LLG C
Sbjct: 682 LEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCT 741
Query: 512 SH-GNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPG 570
H N+E + A L+ L+P ++ Y +L+N++A AG W ++ R+ M+ ++ K PG
Sbjct: 742 IHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPG 801
Query: 571 CSWIEDRDEIHKFRASDRSHDRSEEIY 597
CSW+E +DE+H F D++H R EEIY
Sbjct: 802 CSWVELKDELHVFLVGDKAHPRWEEIY 828
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 139/541 (25%), Positives = 245/541 (45%), Gaps = 67/541 (12%)
Query: 11 AKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETP--NLVSWSAVIGG 68
A VF MP RD VSWN ++ + + + +A +S N P ++VSW++++ G
Sbjct: 60 ASMVFDKMPLRDVVSWNKMINGYSKSNDMFKA-------NSFFNMMPVRDVVSWNSMLSG 112
Query: 69 FTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSN 128
+ QNG ++I + M EG+E + RT + +L C+ L+ SLG + HG + R G ++
Sbjct: 113 YLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTD 172
Query: 129 PFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEH 188
+ L+D+Y + + +L++F KN VS
Sbjct: 173 VVAASALLDMYAKGKRFVESLRVFQGIPEKNSVS-------------------------- 206
Query: 189 LGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLL-MRDGIEPTSFTFGSVLIACADMNSL 247
W+++I+G V N+L A F+++ + G+ + + SVL +CA ++ L
Sbjct: 207 ---------WSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQS--IYASVLRSCAALSEL 255
Query: 248 RKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGF 307
R G ++HA A+ +D V A ++MY + ++ AQ+ FD EN+ G+
Sbjct: 256 RLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGY 315
Query: 308 EPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDV 367
+ + A+ LF ++S L D ++ + AC+ + + G Q++ AI+ DV
Sbjct: 316 SQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDV 375
Query: 368 HIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILAS 427
+ A +DMY KC +L A + + D VS NA++ A+ +G G E + F +L S
Sbjct: 376 CVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRS 435
Query: 428 GFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEA 487
PD +F S L AC GS+ G E + + + ++D+ S+ G + EA
Sbjct: 436 RIEPDEFTFGSILKACT-GGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEA 494
Query: 488 -------------------YEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIE 528
E + + V W +++ G V E Q+ R++E
Sbjct: 495 EKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMME 554
Query: 529 L 529
+
Sbjct: 555 M 555
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 117/416 (28%), Positives = 207/416 (49%), Gaps = 14/416 (3%)
Query: 104 CARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSC 163
CA+ L LGK+ H ++ +GF FV+N L+ VY D +SA +F K +++ VS
Sbjct: 16 CAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSW 75
Query: 164 NTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLM 223
N +I GY ++ ++ +A F+ M R ++SWNSM+SGY+ N ++ +F D +
Sbjct: 76 NKMINGYSKSNDMFKANSFFNMMP----VRDVVSWNSMLSGYLQNGESLKSIEVFVD-MG 130
Query: 224 RDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLV 283
R+GIE TF +L C+ + G +IH + + +G +D AL++MY + + V
Sbjct: 131 REGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFV 190
Query: 284 AAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACS 343
+ F I ++ G N A++ F EM ++ +L +C+
Sbjct: 191 ESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCA 250
Query: 344 SLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNA 403
+L+ + G Q+HA+A++ + +D + TA +DMYAKC +++ A++ + + S NA
Sbjct: 251 ALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNA 310
Query: 404 MLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYD 463
M+T Y+ HG + + F R+++SG D IS AC + G + + L
Sbjct: 311 MITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLA---- 366
Query: 464 VKPSLKHYTCM----VDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
+K SL C+ +D+ + L EA+ ++ D+V W A++ +G
Sbjct: 367 IKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMR-RRDAVSWNAIIAAHEQNGK 421
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 118/402 (29%), Positives = 179/402 (44%), Gaps = 84/402 (20%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKC +L +A +VF M RD VSWN+++ A
Sbjct: 384 MYGKCQALAEAFRVFDEMRRRDAVSWNAIIAA---------------------------- 415
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
QNG E + + M +EP+ T S+L AC L G E H I
Sbjct: 416 --------HEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSI 466
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
++G SN V L+D+Y +CG + A KI S+F + NV+
Sbjct: 467 VKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRF---------------FQRANVSGTM 511
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
E ++M + +Q +SWNS+ISGYV ++A +F +M GI P FT+ +VL
Sbjct: 512 EELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTR-MMEMGITPDKFTYATVLDT 570
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA++ S GK+IHA I LQSD ++ LV+MY + DL +++ F
Sbjct: 571 CANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMF----------- 619
Query: 301 KMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSSLA 346
E + TWNAM QLF M+ ++ P+ T IL AC+ +
Sbjct: 620 ---EKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMG 676
Query: 347 TMERGKQVHAYAIRCGYDSDVHIG--TALVDMYAKCGSLKHA 386
+++G + + Y ++ Y D + + +VD+ K G +K A
Sbjct: 677 LIDKGLE-YFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRA 717
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 105/249 (42%), Gaps = 33/249 (13%)
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
+ CA +L GK+ HA I G + TFV L+++Y +D V+A M FD++ + ++
Sbjct: 14 VECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMP-LRDV 72
Query: 299 LGKMK--------EDGFEPN----------VYTWNAM--------------QLFSEMLSL 326
+ K D F+ N V +WN+M ++F +M
Sbjct: 73 VSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGRE 132
Query: 327 DLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHA 386
+ D T IIL CS L G Q+H +R G D+DV +AL+DMYAK +
Sbjct: 133 GIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVES 192
Query: 387 RLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHA 446
++ I + VS +A++ + + F+ + + S L +C
Sbjct: 193 LRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAAL 252
Query: 447 GSIKTGSEF 455
++ G +
Sbjct: 253 SELRLGGQL 261
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 62/117 (52%), Gaps = 2/117 (1%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG L D++ +F+ RD V+WN+++ A +G EA++ ERM L+N PN V
Sbjct: 605 MYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERM-ILENIKPNHV 663
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEF 116
++ +++ G ++ + + M+ + GL+P S+++ + K+ E
Sbjct: 664 TFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALEL 720
>gi|414872095|tpg|DAA50652.1| TPA: hypothetical protein ZEAMMB73_776700 [Zea mays]
Length = 647
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 178/531 (33%), Positives = 297/531 (55%), Gaps = 12/531 (2%)
Query: 72 NGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFV 131
G +EA+ FR EGL S + AC Q L L ++ H + +G ++ F
Sbjct: 26 TGRVKEALHRRFR---EGLWSEPGLFSHIFRAC---QALPLLRQLHAFAATSGAAADRFT 79
Query: 132 VNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGV 191
N L+ Y GD +A +F + +N +S N +I GY +NG++ AR+LFD+M
Sbjct: 80 ANHLLLAYADLGDFPTARGLFERIPKRNVMSWNILIGGYVKNGDLETARKLFDEMP---- 135
Query: 192 QRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGK 251
R + +WN+M++G ++ L +E+ F + R+G++P + GS+ CA + + G+
Sbjct: 136 ARNVATWNAMVAGLTNSGLNEESLGFFF-AMRREGMQPDEYGLGSLFRCCAGLRDVVSGR 194
Query: 252 EIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNV 311
++HA + GL D VG +L MY R L + A + ++ + G N
Sbjct: 195 QVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALRALPSLNIVSCNTTISGRTQNG 254
Query: 312 YTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGT 371
A++ F M + + T +++CS LA + +G+Q+HA AI+ G D V + T
Sbjct: 255 DAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQGQQIHALAIKTGVDKVVPVMT 314
Query: 372 ALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRP 431
+LV MY++CG L + S DLV +AM++AY HGHG++ + F++++A+G P
Sbjct: 315 SLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISAYGFHGHGQKAVGLFKQMMAAGAEP 374
Query: 432 DHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLLSRAGELGEAYEF 490
+ ++FL+ L AC H+G G F+LM Y ++PS+KHYTC+VDLL R+G L EA +
Sbjct: 375 NEVTFLTLLYACSHSGLKDEGMNCFELMTKTYGLQPSVKHYTCIVDLLGRSGCLNEAEDL 434
Query: 491 IKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRW 550
I +P+ PD V+W LL C + + + A+R+IEL+P+++ +YV+L+N+ A + RW
Sbjct: 435 ILSMPVQPDGVIWKTLLSACKTQKKFDMAERIAERVIELDPHDSASYVLLSNIRATSSRW 494
Query: 551 SDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
D+++ R+ M+++ + K PG SW+E + +IH+F D SH R EI ++
Sbjct: 495 EDVSKVRETMREQNVRKEPGVSWVELKGQIHQFCTGDESHSRQREIVECLE 545
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 112/410 (27%), Positives = 180/410 (43%), Gaps = 47/410 (11%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETP--NL 59
Y G A+ +F+ +P+R+ +SWN ++ NG LE L +E P N+
Sbjct: 87 YADLGDFPTARGLFERIPKRNVMSWNILIGGYVKNGD-------LETARKLFDEMPARNV 139
Query: 60 VSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
+W+A++ G T +G +EE++G F M+ EG++P+ L S+ CA L+ + G++ H Y
Sbjct: 140 ATWNAMVAGLTNSGLNEESLGFFFAMRREGMQPDEYGLGSLFRCCAGLRDVVSGRQVHAY 199
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ R+G + V + L +Y RCG + N VSCNT I G +NG+ A
Sbjct: 200 VVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALRALPSLNIVSCNTTISGRTQNGDAEGA 259
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
E F M RG G+E + TF S +
Sbjct: 260 LEFFCLM------RGA------------------------------GVEANAVTFVSAVT 283
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
+C+D+ +L +G++IHALAI G+ V +LV MY R L ++ E + +L
Sbjct: 284 SCSDLAALAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVL 343
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
+ + + A+ LF +M++ P+ T +L ACS + G
Sbjct: 344 CSAMISAYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMT 403
Query: 360 RC-GYDSDVHIGTALVDMYAKCGSLKHAR-LAYKRISTPDLVSQNAMLTA 407
+ G V T +VD+ + G L A L PD V +L+A
Sbjct: 404 KTYGLQPSVKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSA 453
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 112/238 (47%), Gaps = 10/238 (4%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
N+VS + I G TQNG E A+ M+ G+E NA T S + +C+ L L+ G++ H
Sbjct: 239 NIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQGQQIH 298
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
+ G V+ LV +Y RCG + + ++ ++S + V C+ +I Y +G+
Sbjct: 299 ALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISAYGFHGHGQ 358
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
+A LF QM G + +++ +++ + L DE + F + G++P+ + +
Sbjct: 359 KAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYGLQPSVKHYTCI 418
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
+ L + ++ L +++ +Q D + L+ C+ Q FD E I
Sbjct: 419 VDLLGRSGCLNEAED---LILSMPVQPDGVIWKTLLSA-CK------TQKKFDMAERI 466
>gi|147866113|emb|CAN78822.1| hypothetical protein VITISV_006669 [Vitis vinifera]
Length = 599
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 188/564 (33%), Positives = 307/564 (54%), Gaps = 54/564 (9%)
Query: 52 LDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFR-MQAEGLEPNARTLSSVLPACARLQKL 110
+ PN SW+ I GF + EA+ + R +Q +G +P+ T + ACARL +
Sbjct: 36 FNTRNPNTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLI 95
Query: 111 SLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGY 170
+G E G++ GF S+ FV N ++ + CGD+ A K+F K SC
Sbjct: 96 RMGSEILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDK-------SC------- 141
Query: 171 CENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPT 230
R ++SWNSMI+GYV EA + +R++ + +GI+P
Sbjct: 142 ---------------------VRDLVSWNSMINGYVRRGWAYEALNFYREMKV-EGIKPD 179
Query: 231 SFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFD 290
T V+ +CA + L G+E H GL+ + AL++MY + +L +A+ FD
Sbjct: 180 EVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCGNLESARKLFD 239
Query: 291 EIEN--IENLLGKMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYT 334
+ N + + + ++ + +V WNAM LF+EM ++++ PD T
Sbjct: 240 SMTNKTMVSWTTMLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVT 299
Query: 335 VGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS 394
+ LSACS L ++ G +H Y + +V +GTAL+DMYAKCG + A ++ +
Sbjct: 300 MVSCLSACSQLGALDVGIWIHHYIEKHELSLNVALGTALIDMYAKCGKITKAIQVFQELP 359
Query: 395 TPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSE 454
+ ++ A+++ A+HG+ IA+F ++ + PD ++FL LSAC H G ++ G +
Sbjct: 360 GRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRK 419
Query: 455 FFDLMA-YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSH 513
+F M+ +++ P LKHY+CMVDLL RAG L EA E IK +P+ D+V+WGAL C H
Sbjct: 420 YFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEADAVVWGALFFACRIH 479
Query: 514 GNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSW 573
GN+ G+ AA +L++++P+++G YV+LAN++ A W + + R+ M+ R + K+PGCS
Sbjct: 480 GNVLMGERAASKLLQMDPHDSGIYVLLANMYGEAEMWKEAGKXRKLMRQRGVEKTPGCSS 539
Query: 574 IEDRDEIHKFRASDRSHDRSEEIY 597
IE +++F D+SH +SE+IY
Sbjct: 540 IEVNGIVYEFIVRDKSHPQSEQIY 563
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 113/411 (27%), Positives = 182/411 (44%), Gaps = 58/411 (14%)
Query: 5 CGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSA 64
CG LD A+K+F RD VSWNS
Sbjct: 127 CGDLDGARKMFDKSCVRDLVSWNS------------------------------------ 150
Query: 65 VIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNG 124
+I G+ + G+ EA+ M+ EG++P+ T+ V+ +CA+L+ L LG+E H YI NG
Sbjct: 151 MINGYVRRGWAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENG 210
Query: 125 FMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFD 184
+ N L+D+Y +CG++ SA K+F + K VS T+ LFD
Sbjct: 211 LKLTVPLANALMDMYMKCGNLESARKLFDSMTNKTMVSWTTM---------------LFD 255
Query: 185 QMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADM 244
+M + ++ WN+MI GYV + EA ++F ++ + I P T S L AC+ +
Sbjct: 256 EMP----DKDVVPWNAMIGGYVHANRGKEALALFNEMQAMN-INPDEVTMVSCLSACSQL 310
Query: 245 NSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKE 304
+L G IH L + +G AL++MY + + A F E+ +L
Sbjct: 311 GALDVGIWIHHYIEKHELSLNVALGTALIDMYAKCGKITKAIQVFQELPGRNSLTWTAII 370
Query: 305 DGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHA-YAIRCGY 363
G + A+ FSEM+ + PD T +LSAC +E G++ + + +
Sbjct: 371 SGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQMSSKFNL 430
Query: 364 DSDVHIGTALVDMYAKCGSLKHARLAYKRIST-PDLVSQNAMLTAYAMHGH 413
+ + +VD+ + G L+ A K + D V A+ A +HG+
Sbjct: 431 SPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEADAVVWGALFFACRIHGN 481
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 127/274 (46%), Gaps = 27/274 (9%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETP--N 58
MY KCG+L+ A+K+F M + VSW ++ L +E P +
Sbjct: 224 MYMKCGNLESARKLFDSMTNKTMVSWTTM----------------------LFDEMPDKD 261
Query: 59 LVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHG 118
+V W+A+IGG+ +EA+ + MQA + P+ T+ S L AC++L L +G H
Sbjct: 262 VVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHH 321
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
YI ++ N + L+D+Y +CG + A+++F + +N ++ II G +GN
Sbjct: 322 YIEKHELSLNVALGTALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHGNAHG 381
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
A F +M V +++ ++S L +E F + + + P + ++
Sbjct: 382 AIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMV 441
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGAL 272
L + +E L ++ +++D V GAL
Sbjct: 442 DLLGRAGLLEEAEE---LIKSMPIEADAVVWGAL 472
>gi|297746037|emb|CBI16093.3| unnamed protein product [Vitis vinifera]
Length = 702
Score = 335 bits (858), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 188/596 (31%), Positives = 310/596 (52%), Gaps = 73/596 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG +D A +V+ ++M+SLD T N
Sbjct: 157 MYAKCGEVDSAVRVY-------------------------------DKMTSLDAATCN-- 183
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+I + +NG+ +A + ++ G PN T S++L C + + GK+ H ++
Sbjct: 184 ---CLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQEGKQLHAHV 240
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ ++S V N L+ +Y +CG M A +F +N +S I G+ ++G+ +A
Sbjct: 241 VKMQYLSETAVGNALLTLYSKCGMMEEAEIVFENLGQRNIISWTASINGFYQHGDFKKAL 300
Query: 181 ELFDQMEHLGVQRGIISWNSMISG-------YVDNSLYDEAFS---MFRDLLMRDGIE-- 228
+ F M G++ +++ +++ ++ + + L+R IE
Sbjct: 301 KQFSMMRESGIEPNEFTFSIVLASCGCDLGKWMKQRTSSNRWGGQHLMSIFLLRKMIEEG 360
Query: 229 -------PTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQD 281
P F S+L AC ++ R G+ +H + + +SD ++ AL+ MY +
Sbjct: 361 NKPTSLRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGH 420
Query: 282 LVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQL-FSEMLSLDLTPDIYTVGIILS 340
+ A FD I PNV +WN + FS+ML P T+ +L
Sbjct: 421 VEKACRVFDWI----------------PNVVSWNTLIAGFSQMLDQGFCPSSVTISSLLP 464
Query: 341 ACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVS 400
AC+++A + GK++H YA+ G + DV++ +ALVDMYAKCG + A++ + + + V+
Sbjct: 465 ACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVT 524
Query: 401 QNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA 460
N+++ YA HG+ E I F ++ S + DH++F + L+AC HAG ++ G F M
Sbjct: 525 WNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFRKMQ 584
Query: 461 -YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFG 519
Y ++P L+HY CMVDLL RAG+L EAY+ IK +P+ PD +WGALLG C +HGN+E
Sbjct: 585 EKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRNHGNIELA 644
Query: 520 QIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIE 575
++AA+ L ELEP + G+ ++L+NL+A AGRW + A+ ++ MK R+ K PGCSWIE
Sbjct: 645 EVAAEHLFELEPESPGSSLLLSNLYADAGRWGNAAKMKKMMKQRKFGKFPGCSWIE 700
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 111/478 (23%), Positives = 209/478 (43%), Gaps = 107/478 (22%)
Query: 92 PNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKI 151
P+ + + S L C R + LG+ +H ++ + G S+ FV L+D+Y +CG++ SA+++
Sbjct: 111 PHRQYVFSALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRV 170
Query: 152 FSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLY 211
+ K + + +CN +I Y NG +A ++F Q+ ++G +
Sbjct: 171 YDKMTSLDAATCNCLISAYARNGFFVQAFQVFMQIGNMGTR------------------- 211
Query: 212 DEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGA 271
P +T+ ++L C ++++++GK++HA + + S+T VG A
Sbjct: 212 -----------------PNHYTYSTMLAVCGTISAIQEGKQLHAHVVKMQYLSETAVGNA 254
Query: 272 LVEMYCRYQDLVAAQMAFDEI--ENIENLLGK-------------------MKEDGFEPN 310
L+ +Y + + A++ F+ + NI + M+E G EPN
Sbjct: 255 LLTLYSKCGMMEEAEIVFENLGQRNIISWTASINGFYQHGDFKKALKQFSMMRESGIEPN 314
Query: 311 VYT------------------------WNAMQLFSEML----------SLDLTPDIYTVG 336
+T W L S L L P+ + +
Sbjct: 315 EFTFSIVLASCGCDLGKWMKQRTSSNRWGGQHLMSIFLLRKMIEEGNKPTSLRPNQFVLP 374
Query: 337 IILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTP 396
IL AC L+ G+ +H ++ ++SD +I +AL+ MY+KCG ++ A + I P
Sbjct: 375 SILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFDWI--P 432
Query: 397 DLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFF 456
++VS N + IA F ++L GF P ++ S L AC + +++ G E
Sbjct: 433 NVVSWNTL-------------IAGFSQMLDQGFCPSSVTISSLLPACTNVANLRHGKEIH 479
Query: 457 DLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
V+ + + +VD+ ++ G + EA +P ++V W +L+ G +HG
Sbjct: 480 GYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMP-ERNTVTWNSLIFGYANHG 536
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 103/214 (48%), Gaps = 3/214 (1%)
Query: 339 LSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDL 398
LS C +E G++ H + ++ G SD + T+L+DMYAKCG + A Y ++++ D
Sbjct: 120 LSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRVYDKMTSLDA 179
Query: 399 VSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDL 458
+ N +++AYA +G + F +I G RP+H ++ + L+ C +I+ G +
Sbjct: 180 ATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQEGKQLHAH 239
Query: 459 MAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE- 517
+ ++ L S+ G + EA E + + + + W A + G HG+ +
Sbjct: 240 VVKMQYLSETAVGNALLTLYSKCGMMEEA-EIVFENLGQRNIISWTASINGFYQHGDFKK 298
Query: 518 -FGQIAADRLIELEPNNTGNYVMLANLFAYAGRW 550
Q + R +EPN ++LA+ G+W
Sbjct: 299 ALKQFSMMRESGIEPNEFTFSIVLASCGCDLGKW 332
>gi|356515406|ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Glycine max]
Length = 647
Score = 335 bits (858), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 181/510 (35%), Positives = 272/510 (53%), Gaps = 36/510 (7%)
Query: 90 LEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSAL 149
LEP+ +++L C +L KL GK H ++ + F + + N L+ +Y RCG +
Sbjct: 70 LEPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSL---- 125
Query: 150 KIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNS 209
AR LFD+M H R ++SW SMI+GY N
Sbjct: 126 ---------------------------EGARRLFDEMPH----RDMVSWTSMITGYAQND 154
Query: 210 LYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVG 269
+A +F +L DG EP FT S++ C M S G++IHA G S+ FVG
Sbjct: 155 RASDALLLFPRML-SDGAEPNEFTLSSLVKCCGYMASYNCGRQIHACCWKYGCHSNVFVG 213
Query: 270 GALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLT 329
+LV+MY R L A + FD++ + G+ A+ LF M
Sbjct: 214 SSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALIAGYARKGEGEEALALFVRMQREGYR 273
Query: 330 PDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLA 389
P +T +LS+CSS+ +E+GK +HA+ ++ ++G L+ MYAK GS++ A
Sbjct: 274 PTEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQKLVGYVGNTLLHMYAKSGSIRDAEKV 333
Query: 390 YKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSI 449
+ ++ D+VS N+ML YA HG GKE F ++ G P+ I+FLS L+AC HA +
Sbjct: 334 FDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQFDEMIRFGIEPNDITFLSVLTACSHARLL 393
Query: 450 KTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
G +F LM Y+++P + HY +VDLL RAG L +A FI+++P+ P +WGALLG
Sbjct: 394 DEGKHYFGLMRKYNIEPKVSHYATIVDLLGRAGLLDQAKSFIEEMPIEPTVAIWGALLGA 453
Query: 510 CVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSP 569
H N E G AA R+ EL+P+ G + +LAN++A AGRW D+A+ R+ MKD + K P
Sbjct: 454 SKMHKNTEMGAYAAQRVFELDPSYPGTHTLLANIYASAGRWEDVAKVRKIMKDSGVKKEP 513
Query: 570 GCSWIEDRDEIHKFRASDRSHDRSEEIYTI 599
CSW+E + +H F A+D +H + E+I+ +
Sbjct: 514 ACSWVEVENSVHVFVANDVAHPQKEKIHKM 543
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 113/426 (26%), Positives = 186/426 (43%), Gaps = 73/426 (17%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +CGSL+ A+++F MP RD +V
Sbjct: 118 MYARCGSLEGARRLFDEMPHRD------------------------------------MV 141
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+++I G+ QN +A+ + RM ++G EPN TLSS++ C + + G++ H
Sbjct: 142 SWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMASYNCGRQIHACC 201
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G SN FV + LVD+Y RCG + A+ +F K KNEVS N +I GY G EA
Sbjct: 202 WKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALIAGYARKGEGEEAL 261
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LF +M+ R+G PT FT+ ++L +
Sbjct: 262 ALFVRMQ------------------------------------REGYRPTEFTYSALLSS 285
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C+ M L +GK +HA + + +VG L+ MY + + A+ FD++ ++ +
Sbjct: 286 CSSMGCLEQGKWLHAHLMKSSQKLVGYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSC 345
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G+ + A Q F EM+ + P+ T +L+ACS ++ GK +
Sbjct: 346 NSMLIGYAQHGLGKEAAQQFDEMIRFGIEPNDITFLSVLTACSHARLLDEGKHYFGLMRK 405
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST-PDLVSQNAMLTAYAMHGHGKEGIA 419
+ V +VD+ + G L A+ + + P + A+L A MH + + G
Sbjct: 406 YNIEPKVSHYATIVDLLGRAGLLDQAKSFIEEMPIEPTVAIWGALLGASKMHKNTEMGAY 465
Query: 420 HFRRIL 425
+R+
Sbjct: 466 AAQRVF 471
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 159/319 (49%), Gaps = 9/319 (2%)
Query: 220 DLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRY 279
DL+ +EP + ++L C + L++GK +H + + D + +L+ MY R
Sbjct: 63 DLIDCGSLEPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARC 122
Query: 280 QDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIIL 339
L A+ FDE+ + + + G+ N +A+ LF MLS P+ +T+ ++
Sbjct: 123 GSLEGARRLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLV 182
Query: 340 SACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLV 399
C +A+ G+Q+HA + G S+V +G++LVDMYA+CG L A L + ++ + V
Sbjct: 183 KCCGYMASYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEV 242
Query: 400 SQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM 459
S NA++ YA G G+E +A F R+ G+RP ++ + LS+C G ++ G +
Sbjct: 243 SWNALIAGYARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHL 302
Query: 460 AYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFG 519
K ++ + +++G + +A + K+ + D V ++L G HG G
Sbjct: 303 MKSSQKLVGYVGNTLLHMYAKSGSIRDAEKVFDKL-VKVDVVSCNSMLIGYAQHG---LG 358
Query: 520 QIAADRLIEL-----EPNN 533
+ AA + E+ EPN+
Sbjct: 359 KEAAQQFDEMIRFGIEPND 377
>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 335 bits (858), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 177/520 (34%), Positives = 285/520 (54%), Gaps = 38/520 (7%)
Query: 82 LFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRR 141
L R Q + ++L C L KL+ GK H + + F + + N L+++Y +
Sbjct: 3 LIRQQCKNNAGAREICHTLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAK 62
Query: 142 CGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSM 201
CGD++ A R+LFD+M R +++W ++
Sbjct: 63 CGDLVYA-------------------------------RKLFDEMS----SRDVVTWTAL 87
Query: 202 ISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNS--LRKGKEIHALAIA 259
I+GY + +A + ++L R G++P FT S+L A + + S + +G+++H L +
Sbjct: 88 ITGYSQHDRPQDALLLLPEML-RIGLKPNQFTLASLLKAASGVGSTDVLQGRQLHGLCLR 146
Query: 260 LGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQL 319
G S+ +V A+++MY R L AQ+ FD + + + G+ A L
Sbjct: 147 YGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQGDKAFCL 206
Query: 320 FSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAK 379
FS ML ++ P +T +L AC+S+ ++E+GK VHA I+ G +G L+DMYAK
Sbjct: 207 FSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNTLLDMYAK 266
Query: 380 CGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSA 439
GS++ A+ + R++ D+VS N+MLT Y+ HG GK + F +L + P+ I+FL
Sbjct: 267 SGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPNDITFLCV 326
Query: 440 LSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPD 499
L+AC HAG + G +FD+M Y+V+P + HY MVDLL RAG L A +FI ++P+ P
Sbjct: 327 LTACSHAGLLDEGRHYFDMMKKYNVEPQISHYVTMVDLLGRAGHLDRAIQFISEMPIKPT 386
Query: 500 SVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQK 559
+ +WGALLG C H N+E G AA+ + EL+ + G +V+L N++A AGRW+D A+ R+
Sbjct: 387 AAVWGALLGACRMHKNMELGGYAAECIFELDSHYPGTHVLLYNIYALAGRWNDAAKVRKM 446
Query: 560 MKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTI 599
MK+ + K P CSW+E +E+H F A D +H + EI+ +
Sbjct: 447 MKESGVKKEPACSWVEMENEVHVFVADDDAHPQRREIHNM 486
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 117/401 (29%), Positives = 191/401 (47%), Gaps = 48/401 (11%)
Query: 22 DCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGM 81
D V N+++ A G ++ A + + MSS D +V+W+A+I G++Q+ ++A+ +
Sbjct: 49 DLVMQNTLLNLYAKCGDLVYARKLFDEMSSRD-----VVTWTALITGYSQHDRPQDALLL 103
Query: 82 LFRMQAEGLEPNARTLSSVLPACARLQKLSL--GKEFHGYITRNGFMSNPFVVNGLVDVY 139
L M GL+PN TL+S+L A + + + G++ HG R G+ SN +V ++D+Y
Sbjct: 104 LPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQLHGLCLRYGYDSNVYVSCAILDMY 163
Query: 140 RRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWN 199
RC + A IF KNEVS N +I GY G
Sbjct: 164 ARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQG----------------------- 200
Query: 200 SMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIA 259
D+AF +F ++L R+ ++PT FT+ SVL ACA M SL +GK +HAL I
Sbjct: 201 ------------DKAFCLFSNML-RENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIK 247
Query: 260 LGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQL 319
G + FVG L++MY + + A+ FD + + + G+ + A+Q
Sbjct: 248 WGEKLVAFVGNTLLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQR 307
Query: 320 FSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIG--TALVDMY 377
F EML + P+ T +L+ACS ++ G+ H + + Y+ + I +VD+
Sbjct: 308 FEEMLRTRIAPNDITFLCVLTACSHAGLLDEGR--HYFDMMKKYNVEPQISHYVTMVDLL 365
Query: 378 AKCGSLKHA-RLAYKRISTPDLVSQNAMLTAYAMHGHGKEG 417
+ G L A + + P A+L A MH + + G
Sbjct: 366 GRAGHLDRAIQFISEMPIKPTAAVWGALLGACRMHKNMELG 406
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 117/255 (45%), Gaps = 35/255 (13%)
Query: 56 TPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKE 115
+ N VSW+A+I G+ + G ++A + M E ++P T SSVL ACA + L GK
Sbjct: 181 SKNEVSWNALIAGYARKGQGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKW 240
Query: 116 FHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGN 175
H + + G FV N L+D+Y + G + A K+F + + ++ VS N+++ GY ++G
Sbjct: 241 VHALMIKWGEKLVAFVGNTLLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGL 300
Query: 176 VAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEA---FSMFR------------- 219
A + F++M + I++ +++ L DE F M +
Sbjct: 301 GKVALQRFEEMLRTRIAPNDITFLCVLTACSHAGLLDEGRHYFDMMKKYNVEPQISHYVT 360
Query: 220 --DLLMRDG-------------IEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQS 264
DLL R G I+PT+ +G++L AC + K E+ A +
Sbjct: 361 MVDLLGRAGHLDRAIQFISEMPIKPTAAVWGALLGAC----RMHKNMELGGYAAECIFEL 416
Query: 265 DTFVGGALVEMYCRY 279
D+ G V +Y Y
Sbjct: 417 DSHYPGTHVLLYNIY 431
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 69/171 (40%), Gaps = 36/171 (21%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K GS++DAKKVF + +RD VSWNS++T
Sbjct: 263 MYAKSGSIEDAKKVFDRLAKRDVVSWNSMLT----------------------------- 293
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
G++Q+G + A+ M + PN T VL AC+ L G+ + +
Sbjct: 294 -------GYSQHGLGKVALQRFEEMLRTRIAPNDITFLCVLTACSHAGLLDEGRHYFDMM 346
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYC 171
+ +VD+ R G + A++ S+ IK + ++G C
Sbjct: 347 KKYNVEPQISHYVTMVDLLGRAGHLDRAIQFISEMPIKPTAAVWGALLGAC 397
>gi|57899529|dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa Japonica Group]
Length = 698
Score = 334 bits (857), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 202/616 (32%), Positives = 304/616 (49%), Gaps = 88/616 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC L DA +F MP RD LV
Sbjct: 54 MYVKCACLPDAAHIFATMPARD------------------------------------LV 77
Query: 61 SWSAVIGGFTQNGYDEEAIGMLF--RMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHG 118
+W+A++ G+ +G A+ L +MQ L PNA TL ++LP A+ L+ G H
Sbjct: 78 AWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHA 137
Query: 119 YITRNGFMSN----------PFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIV 168
Y R N + L+D+Y +CG +L
Sbjct: 138 YCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLL---------------------- 175
Query: 169 GYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRD--G 226
AR +FD M R ++W+++I G+V S +AF +F+ +L +
Sbjct: 176 ---------YARRVFDAMP----ARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCF 222
Query: 227 IEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQ 286
+ PTS S L ACA ++ LR G+++HAL G+ +D G +L+ MY + + A
Sbjct: 223 LSPTSI--ASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAI 280
Query: 287 MAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLA 346
FDE+ + + G+ N A +F +M + ++ PD T+ ++ ACS LA
Sbjct: 281 ALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLA 340
Query: 347 TMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLT 406
++ G+ H I G S+ I AL+DMYAKCG + +R + + + D+VS N M+
Sbjct: 341 ALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIA 400
Query: 407 AYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVK 465
Y +HG GKE A F + GF PD ++F+ LSAC H+G + G +F +M + Y +
Sbjct: 401 GYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLT 460
Query: 466 PSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADR 525
P ++HY CMVDLLSR G L EAYEFI+ +P+ D +W ALLG C + N++ G+ +
Sbjct: 461 PRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRM 520
Query: 526 LIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRA 585
+ EL P TGN+V+L+N+++ AGR+ + A R K + KSPGCSWIE +H F
Sbjct: 521 IQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVG 580
Query: 586 SDRSHDRSEEIYTIID 601
D+SH +S EIY +D
Sbjct: 581 GDQSHPQSPEIYRELD 596
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 105/460 (22%), Positives = 191/460 (41%), Gaps = 57/460 (12%)
Query: 90 LEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSAL 149
+ PN T L AC+ L G+ H + G ++ FV L+D+Y +C + A
Sbjct: 6 VAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAA 65
Query: 150 KIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNS 209
IF+ ++ V+ N ++ GY +G
Sbjct: 66 HIFATMPARDLVAWNAMLAGYAHHG----------------------------------- 90
Query: 210 LYDEAFSMFRDLLMR-DGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSD--- 265
+Y A + + M+ + P + T ++L A +L +G +HA I L +
Sbjct: 91 MYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNS 150
Query: 266 -------TFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQ 318
+G AL++MY + L+ A+ FD + + GF A
Sbjct: 151 KSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFL 210
Query: 319 LFSEMLSLD---LTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVD 375
LF ML+ L+P ++ L AC+SL + G+Q+HA + G +D+ G +L+
Sbjct: 211 LFKAMLAQGLCFLSPT--SIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLS 268
Query: 376 MYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHIS 435
MYAK G + A + ++ D VS +A+++ Y +G +E F+++ A PD +
Sbjct: 269 MYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAAT 328
Query: 436 FLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIP 495
+S + AC H +++ G + + ++D+ ++ G + + + +P
Sbjct: 329 MVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMP 388
Query: 496 MAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTG 535
+ D V W ++ G HG G+ A +E+ NN G
Sbjct: 389 -SRDIVSWNTMIAGYGIHG---LGKEATALFLEM--NNLG 422
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 146/311 (46%), Gaps = 18/311 (5%)
Query: 222 LMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQD 281
++R + P ++TF L AC+ + G+ IH AI GLQ+D FV AL++MY +
Sbjct: 1 MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60
Query: 282 LVAAQMAFDEIENIENLLGKMKEDGFEPN-VYTWNAMQLFSEMLSLD-LTPDIYTVGIIL 339
L A F + + + G+ + +Y L S + + L P+ T+ +L
Sbjct: 61 LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120
Query: 340 SACSSLATMERGKQVHAYAIRCGYDSD----------VHIGTALVDMYAKCGSLKHARLA 389
+ + +G VHAY IR + V +GTAL+DMYAKCGSL +AR
Sbjct: 121 PLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRV 180
Query: 390 YKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASG---FRPDHISFLSALSACVHA 446
+ + + V+ +A++ + + + F+ +LA G P I+ SAL AC
Sbjct: 181 FDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIA--SALRACASL 238
Query: 447 GSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGAL 506
++ G + L+A V L ++ + ++AG + +A ++ + D+V + AL
Sbjct: 239 DHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAV-KDTVSYSAL 297
Query: 507 LGGCVSHGNLE 517
+ G V +G E
Sbjct: 298 VSGYVQNGRAE 308
>gi|297598430|ref|NP_001045574.2| Os01g0977400 [Oryza sativa Japonica Group]
gi|255674132|dbj|BAF07488.2| Os01g0977400, partial [Oryza sativa Japonica Group]
Length = 687
Score = 334 bits (857), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 202/616 (32%), Positives = 304/616 (49%), Gaps = 88/616 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC L DA +F MP RD LV
Sbjct: 54 MYVKCACLPDAAHIFATMPARD------------------------------------LV 77
Query: 61 SWSAVIGGFTQNGYDEEAIGMLF--RMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHG 118
+W+A++ G+ +G A+ L +MQ L PNA TL ++LP A+ L+ G H
Sbjct: 78 AWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHA 137
Query: 119 YITRNGFMSN----------PFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIV 168
Y R N + L+D+Y +CG +L
Sbjct: 138 YCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLL---------------------- 175
Query: 169 GYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRD--G 226
AR +FD M R ++W+++I G+V S +AF +F+ +L +
Sbjct: 176 ---------YARRVFDAMP----ARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCF 222
Query: 227 IEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQ 286
+ PTS S L ACA ++ LR G+++HAL G+ +D G +L+ MY + + A
Sbjct: 223 LSPTSI--ASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAI 280
Query: 287 MAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLA 346
FDE+ + + G+ N A +F +M + ++ PD T+ ++ ACS LA
Sbjct: 281 ALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLA 340
Query: 347 TMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLT 406
++ G+ H I G S+ I AL+DMYAKCG + +R + + + D+VS N M+
Sbjct: 341 ALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIA 400
Query: 407 AYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVK 465
Y +HG GKE A F + GF PD ++F+ LSAC H+G + G +F +M + Y +
Sbjct: 401 GYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLT 460
Query: 466 PSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADR 525
P ++HY CMVDLLSR G L EAYEFI+ +P+ D +W ALLG C + N++ G+ +
Sbjct: 461 PRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRM 520
Query: 526 LIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRA 585
+ EL P TGN+V+L+N+++ AGR+ + A R K + KSPGCSWIE +H F
Sbjct: 521 IQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVG 580
Query: 586 SDRSHDRSEEIYTIID 601
D+SH +S EIY +D
Sbjct: 581 GDQSHPQSPEIYRELD 596
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 108/459 (23%), Positives = 190/459 (41%), Gaps = 55/459 (11%)
Query: 90 LEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSAL 149
+ PN T L AC+ L G+ H + G ++ FV L+D+Y +C + A
Sbjct: 6 VAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAA 65
Query: 150 KIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNS 209
IF+ ++ V+ N ++ GY +G M H V
Sbjct: 66 HIFATMPARDLVAWNAMLAGYAHHG-----------MYHHAVAH---------------- 98
Query: 210 LYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSD---- 265
L M R + P + T ++L A +L +G +HA I L +
Sbjct: 99 LLSMQMQMHR-------LRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSK 151
Query: 266 ------TFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQL 319
+G AL++MY + L+ A+ FD + + GF A L
Sbjct: 152 SKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLL 211
Query: 320 FSEMLSLD---LTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDM 376
F ML+ L+P ++ L AC+SL + G+Q+HA + G +D+ G +L+ M
Sbjct: 212 FKAMLAQGLCFLSPT--SIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSM 269
Query: 377 YAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISF 436
YAK G + A + ++ D VS +A+++ Y +G +E F+++ A PD +
Sbjct: 270 YAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATM 329
Query: 437 LSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPM 496
+S + AC H +++ G + + ++D+ ++ G + + + +P
Sbjct: 330 VSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMP- 388
Query: 497 APDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTG 535
+ D V W ++ G HG G+ A +E+ NN G
Sbjct: 389 SRDIVSWNTMIAGYGIHG---LGKEATALFLEM--NNLG 422
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 146/311 (46%), Gaps = 18/311 (5%)
Query: 222 LMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQD 281
++R + P ++TF L AC+ + G+ IH AI GLQ+D FV AL++MY +
Sbjct: 1 MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60
Query: 282 LVAAQMAFDEIENIENLLGKMKEDGFEPN-VYTWNAMQLFSEMLSLD-LTPDIYTVGIIL 339
L A F + + + G+ + +Y L S + + L P+ T+ +L
Sbjct: 61 LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120
Query: 340 SACSSLATMERGKQVHAYAIRCGYDSD----------VHIGTALVDMYAKCGSLKHARLA 389
+ + +G VHAY IR + V +GTAL+DMYAKCGSL +AR
Sbjct: 121 PLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRV 180
Query: 390 YKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASG---FRPDHISFLSALSACVHA 446
+ + + V+ +A++ + + + F+ +LA G P I+ SAL AC
Sbjct: 181 FDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIA--SALRACASL 238
Query: 447 GSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGAL 506
++ G + L+A V L ++ + ++AG + +A ++ + D+V + AL
Sbjct: 239 DHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAV-KDTVSYSAL 297
Query: 507 LGGCVSHGNLE 517
+ G V +G E
Sbjct: 298 VSGYVQNGRAE 308
>gi|242058523|ref|XP_002458407.1| hypothetical protein SORBIDRAFT_03g032890 [Sorghum bicolor]
gi|241930382|gb|EES03527.1| hypothetical protein SORBIDRAFT_03g032890 [Sorghum bicolor]
Length = 695
Score = 334 bits (857), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 180/546 (32%), Positives = 296/546 (54%), Gaps = 7/546 (1%)
Query: 57 PNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEF 116
P A + G ++ +E I ++ + G + + VL +CA+ G +
Sbjct: 137 PTAALCCAFLSGLSKLSLHQEFIEVVSSLHRRGGAIPSGCIPLVLKSCAQSAASCQGSQT 196
Query: 117 HGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNV 176
H + G + + FV LVD Y + GDM SAL F + +K+ + N +I GY ++G+V
Sbjct: 197 HCHALVRGMLGDVFVQTALVDFYAKNGDMDSALMAFKEMPVKDPIPMNCLITGYSKSGDV 256
Query: 177 AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGS 236
EAR LFD M +R SWNSMI+ Y + EA ++F D ++R+G P + T +
Sbjct: 257 EEARRLFDSMP----RRTSASWNSMIACYAHGGEFREALTLF-DQMLREGASPNAITITT 311
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
V CA L G+ A LQ + V AL+EMY + + + A+ FD + +
Sbjct: 312 VFSICAKTGDLDTGRRARAWIREEDLQ-NVIVHTALMEMYVKCRAIDEARHEFDRMPRRD 370
Query: 297 NLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHA 356
+ G+ N +++LF M + + P+ T+ +LSAC+ L + E G+Q+
Sbjct: 371 VVAWSTMIAGYSQNGRPHESLELFERMKATNCKPNEVTLVGVLSACAQLGSDELGEQIGN 430
Query: 357 YAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKE 416
Y ++G+AL+DMY KCG + AR + R+ +V+ N+M+ A++G ++
Sbjct: 431 YIESQTLPLTSYLGSALIDMYTKCGHVARARSVFNRMEQKVVVTWNSMIRGLALNGFAED 490
Query: 417 GIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYD-VKPSLKHYTCMV 475
IA +R+++ G +P+ ++F++ L+AC HAG + G FF+ M V P ++H C+V
Sbjct: 491 AIALYRKMVGDGIQPNEVTFVALLTACTHAGLVDKGIAFFEEMKKKQHVSPQVEHCACIV 550
Query: 476 DLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTG 535
DLL ++G L EAY+FI + + P++V+W LL C +H ++E ++AA +L+ LEPNN+
Sbjct: 551 DLLCKSGRLWEAYKFICDMEVEPNAVIWSTLLSACRAHADVELAKLAAGKLVALEPNNSS 610
Query: 536 NYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEE 595
YV+L+N++A AG W D+ R M+ + + K SWIE E+H+F D H RS E
Sbjct: 611 IYVLLSNIYADAGLWGDVREIRDLMRSKNLQKLSAYSWIELDGEVHRFLVQDTYHPRSAE 670
Query: 596 IYTIID 601
IY ++D
Sbjct: 671 IYNVVD 676
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 102/416 (24%), Positives = 179/416 (43%), Gaps = 50/416 (12%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y K G +D A FK MP +D + N ++T + +G V EA + M + S
Sbjct: 219 YAKNGDMDSALMAFKEMPVKDPIPMNCLITGYSKSGDVEEARRLFDSMPRRTS-----AS 273
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W+++I + G EA+ + +M EG PNA T+++V CA+ L G+ +I
Sbjct: 274 WNSMIACYAHGGEFREALTLFDQMLREGASPNAITITTVFSICAKTGDLDTGRRARAWI- 332
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
R + N V L+++Y +C + A F + ++ V+ +T+I GY +NG E+ E
Sbjct: 333 REEDLQNVIVHTALMEMYVKCRAIDEARHEFDRMPRRDVVAWSTMIAGYSQNGRPHESLE 392
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
LF++M+ + P T VL AC
Sbjct: 393 LFERMKATNCK------------------------------------PNEVTLVGVLSAC 416
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK 301
A + S G++I + L +++G AL++MY + + A+ F+ +E +
Sbjct: 417 AQLGSDELGEQIGNYIESQTLPLTSYLGSALIDMYTKCGHVARARSVFNRMEQKVVVTWN 476
Query: 302 MKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRC 361
G N + +A+ L+ +M+ + P+ T +L+AC+ +++G +
Sbjct: 477 SMIRGLALNGFAEDAIALYRKMVGDGIQPNEVTFVALLTACTHAGLVDKGIAFFEEMKKK 536
Query: 362 GYDS-DVHIGTALVDMYAKCGSLKHARLAYKRIS----TPDLVSQNAMLTAYAMHG 412
+ S V +VD+ K G L AYK I P+ V + +L+A H
Sbjct: 537 QHVSPQVEHCACIVDLLCKSGRLWE---AYKFICDMEVEPNAVIWSTLLSACRAHA 589
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 103/229 (44%), Gaps = 36/229 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC ++D+A+ F MP RD V+W++++ + NG E+LE ERM + N PN V
Sbjct: 349 MYVKCRAIDEARHEFDRMPRRDVVAWSTMIAGYSQNGRPHESLELFERMKA-TNCKPNEV 407
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+ V+ Q G DE LG++ YI
Sbjct: 408 TLVGVLSACAQLGSDE-----------------------------------LGEQIGNYI 432
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
++ + L+D+Y +CG + A +F++ K V+ N++I G NG +A
Sbjct: 433 ESQTLPLTSYLGSALIDMYTKCGHVARARSVFNRMEQKVVVTWNSMIRGLALNGFAEDAI 492
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEP 229
L+ +M G+Q +++ ++++ L D+ + F ++ + + P
Sbjct: 493 ALYRKMVGDGIQPNEVTFVALLTACTHAGLVDKGIAFFEEMKKKQHVSP 541
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 89/203 (43%), Gaps = 9/203 (4%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG + A+ VF M ++ V+WNS++ A NG +A+ +M D PN V
Sbjct: 450 MYTKCGHVARARSVFNRMEQKVVVTWNSMIRGLALNGFAEDAIALYRKMVG-DGIQPNEV 508
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRM-QAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
++ A++ T G ++ I M + + + P + ++ + +L E + +
Sbjct: 509 TFVALLTACTHAGLVDKGIAFFEEMKKKQHVSPQVEHCACIVDLLCKSGRL---WEAYKF 565
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDM-LSALKIFSKFSIKNEVSCNTIIVG--YCENGNV 176
I N + + L+ R D+ L+ L +++ S +++ Y + G
Sbjct: 566 ICDMEVEPNAVIWSTLLSACRAHADVELAKLAAGKLVALEPNNSSIYVLLSNIYADAGLW 625
Query: 177 AEARELFDQMEHLGVQR-GIISW 198
+ RE+ D M +Q+ SW
Sbjct: 626 GDVREIRDLMRSKNLQKLSAYSW 648
>gi|413943926|gb|AFW76575.1| hypothetical protein ZEAMMB73_444227 [Zea mays]
Length = 869
Score = 334 bits (857), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 190/599 (31%), Positives = 310/599 (51%), Gaps = 55/599 (9%)
Query: 25 SWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFR 84
++N++++ A GLV +A + + D+ +V+W+ ++ Q+G EAI +++
Sbjct: 202 AFNALLSMYARLGLVDDAQMLFGSVDTTDSPGGGVVTWNTMVSLLVQSGRCGEAIEVIYD 261
Query: 85 MQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNG-FMSNPFVVNGLVDVYRRCG 143
M A G+ P+ T +S LPAC++L+ LSLG+E H Y+ ++ +N FV + LVD+
Sbjct: 262 MVARGVRPDGITFASALPACSQLEMLSLGREMHAYVLKDSDLAANSFVASALVDM----- 316
Query: 144 DMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMIS 203
Y + V AR +FD + G R + WN+M+
Sbjct: 317 --------------------------YASHERVGVARRVFDMVP--GGHRQLGLWNAMVC 348
Query: 204 GYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQ 263
GY + +EA +F + G+ P+ T VL ACA + + +H + G+
Sbjct: 349 GYAQAGMDEEALELFARMEAEAGVVPSETTIAGVLPACARSETFAGKEAVHGYVLKRGMA 408
Query: 264 SDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEM 323
+ FV AL+++Y R D+ AA+ F IE + + G + +A QL EM
Sbjct: 409 DNPFVQNALMDLYARLGDMEAARWIFAAIEPRDVVSWNTLITGCVVQGHIHDAFQLVREM 468
Query: 324 LSL------------------DLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDS 365
+ P+ T+ +L C+ LA +GK++H YA+R DS
Sbjct: 469 QQQGRFTDATTEDGIAGTDEEPVVPNNVTLMTLLPGCAMLAAPAKGKEIHGYAMRHALDS 528
Query: 366 DVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHF-RRI 424
D+ +G+ALVDMYAKCG L +R + R+ ++++ N ++ AY MHG G E IA F R +
Sbjct: 529 DIAVGSALVDMYAKCGCLALSRAVFDRLPKRNVITWNVLIMAYGMHGLGDEAIALFDRMV 588
Query: 425 LASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGE 483
+++ +P+ ++F++AL+AC H+G + G E F M + V+P+ + C VD+L RAG
Sbjct: 589 MSNEAKPNEVTFIAALAACSHSGMVDRGMELFHSMKRNHGVQPTPDLHACAVDILGRAGR 648
Query: 484 LGEAYEFIKKI-PMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLAN 542
L EAY I + P W + LG C H N+ G+IAA+RL +LEP+ +YV+L N
Sbjct: 649 LDEAYSIITSMEPGEQQVSAWSSFLGACRLHRNVPLGEIAAERLFQLEPDEASHYVLLCN 708
Query: 543 LFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
+++ AG W + R +M+ R + K PGCSWIE IH+F A + +H S ++ +D
Sbjct: 709 IYSAAGLWEKSSEVRNRMRQRGVSKEPGCSWIELDGVIHRFMAGESAHPESTLVHAHMD 767
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 138/568 (24%), Positives = 231/568 (40%), Gaps = 96/568 (16%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y +CG L A +F MP RD V++NS++ A CL R
Sbjct: 106 YARCGDLTAALALFNAMPSRDAVTFNSLIAAL-----------CLFR------------R 142
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARL-QKLSLGKEFHGYI 120
W A+ L M EG ++ TL SVL AC+ L + L LG+E H +
Sbjct: 143 WL-------------PALDALRDMLLEGHPLSSFTLVSVLLACSHLAEDLRLGREAHAFA 189
Query: 121 TRNGFMSNP--FVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
+NGF+ F N L+ +Y R G + A +F + G V
Sbjct: 190 LKNGFLDGDERFAFNALLSMYARLGLVDDAQMLFGSVDTTDS-----------PGGGV-- 236
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
++WN+M+S V + EA + D++ R G+ P TF S L
Sbjct: 237 -----------------VTWNTMVSLLVQSGRCGEAIEVIYDMVAR-GVRPDGITFASAL 278
Query: 239 IACADMNSLRKGKEIHALAIA-LGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
AC+ + L G+E+HA + L +++FV ALV+MY ++ + A+ FD +
Sbjct: 279 PACSQLEMLSLGREMHAYVLKDSDLAANSFVASALVDMYASHERVGVARRVFDMVPGGHR 338
Query: 298 LLGKMKED--GFEPNVYTWNAMQLFSEM-LSLDLTPDIYTVGIILSACSSLATMERGKQV 354
LG G+ A++LF+ M + P T+ +L AC+ T + V
Sbjct: 339 QLGLWNAMVCGYAQAGMDEEALELFARMEAEAGVVPSETTIAGVLPACARSETFAGKEAV 398
Query: 355 HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHG 414
H Y ++ G + + AL+D+YA+ G ++ AR + I D+VS N ++T + GH
Sbjct: 399 HGYVLKRGMADNPFVQNALMDLYARLGDMEAARWIFAAIEPRDVVSWNTLITGCVVQGHI 458
Query: 415 KEGIAHFRRILASG------------------FRPDHISFLSALSACVHAGSIKTGSEFF 456
+ R + G P++++ ++ L C + G E
Sbjct: 459 HDAFQLVREMQQQGRFTDATTEDGIAGTDEEPVVPNNVTLMTLLPGCAMLAAPAKGKEIH 518
Query: 457 DLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNL 516
+ + + + +VD+ ++ G L + ++P + + W L+ HG
Sbjct: 519 GYAMRHALDSDIAVGSALVDMYAKCGCLALSRAVFDRLPKR-NVITWNVLIMAYGMHGLG 577
Query: 517 EFGQIAADRLI---ELEPNNTGNYVMLA 541
+ DR++ E +PN LA
Sbjct: 578 DEAIALFDRMVMSNEAKPNEVTFIAALA 605
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 118/447 (26%), Positives = 186/447 (41%), Gaps = 75/447 (16%)
Query: 96 TLSSVLPACARLQKLSLGKEFHGYITRNGFMS--NPFVVNGLVDVYRRCGDMLSALKIFS 153
L + A L+ L + HG R + P V N L+ Y RCGD+ +AL
Sbjct: 61 ALPPAAKSAAALRSLIAVRSIHGAALRRDLLHGFTPAVANALLTAYARCGDLTAALA--- 117
Query: 154 KFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDE 213
LF+ M R +++NS+I+ +
Sbjct: 118 ----------------------------LFNAMP----SRDAVTFNSLIAALCLFRRWLP 145
Query: 214 AFSMFRDLLMRDGIEPTSFTFGSVLIACADM-NSLRKGKEIHALAIALGL--QSDTFVGG 270
A RD+L+ +G +SFT SVL+AC+ + LR G+E HA A+ G + F
Sbjct: 146 ALDALRDMLL-EGHPLSSFTLVSVLLACSHLAEDLRLGREAHAFALKNGFLDGDERFAFN 204
Query: 271 ALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAM------------- 317
AL+ MY R + AQM F ++ ++ G V TWN M
Sbjct: 205 ALLSMYARLGLVDDAQMLFGSVDTTDSPGG---------GVVTWNTMVSLLVQSGRCGEA 255
Query: 318 -QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDV----HIGTA 372
++ +M++ + PD T L ACS L + G+++HAY ++ DSD+ + +A
Sbjct: 256 IEVIYDMVARGVRPDGITFASALPACSQLEMLSLGREMHAYVLK---DSDLAANSFVASA 312
Query: 373 LVDMYAKCGSLKHARLAYKRIST--PDLVSQNAMLTAYAMHGHGKEGIAHFRRILA-SGF 429
LVDMYA + AR + + L NAM+ YA G +E + F R+ A +G
Sbjct: 313 LVDMYASHERVGVARRVFDMVPGGHRQLGLWNAMVCGYAQAGMDEEALELFARMEAEAGV 372
Query: 430 RPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYE 489
P + L AC + + + + + ++DL +R G++ EA
Sbjct: 373 VPSETTIAGVLPACARSETFAGKEAVHGYVLKRGMADNPFVQNALMDLYARLGDM-EAAR 431
Query: 490 FIKKIPMAPDSVMWGALLGGCVSHGNL 516
+I D V W L+ GCV G++
Sbjct: 432 WIFAAIEPRDVVSWNTLITGCVVQGHI 458
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 110/231 (47%), Gaps = 19/231 (8%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y + G ++ A+ +F + RD VSWN+++T C G + +A + + M
Sbjct: 420 LYARLGDMEAARWIFAAIEPRDVVSWNTLITGCVVQGHIHDAFQLVREMQQQ-------- 471
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
G FT ++ G E + PN TL ++LP CA L + GKE HGY
Sbjct: 472 ------GRFTDATTEDGIAG----TDEEPVVPNNVTLMTLLPGCAMLAAPAKGKEIHGYA 521
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R+ S+ V + LVD+Y +CG + + +F + +N ++ N +I+ Y +G EA
Sbjct: 522 MRHALDSDIAVGSALVDMYAKCGCLALSRAVFDRLPKRNVITWNVLIMAYGMHGLGDEAI 581
Query: 181 ELFDQMEHLG-VQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPT 230
LFD+M + +++ + ++ + + D +F + G++PT
Sbjct: 582 ALFDRMVMSNEAKPNEVTFIAALAACSHSGMVDRGMELFHSMKRNHGVQPT 632
Score = 39.3 bits (90), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 74/194 (38%), Gaps = 42/194 (21%)
Query: 369 IGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASG 428
+ AL+ YA+CG L A + + + D V+ N+++ A + + R +L G
Sbjct: 98 VANALLTAYARCGDLTAALALFNAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEG 157
Query: 429 FRPDHISFLSALSACVH-AGSIKTGSE---------FFD---------LMAYY------- 462
+ +S L AC H A ++ G E F D L++ Y
Sbjct: 158 HPLSSFTLVSVLLACSHLAEDLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVD 217
Query: 463 ---------DVKPS----LKHYTCMVDLLSRAGELGEAYEFIKKIP---MAPDSVMWGAL 506
D S + + MV LL ++G GEA E I + + PD + + +
Sbjct: 218 DAQMLFGSVDTTDSPGGGVVTWNTMVSLLVQSGRCGEAIEVIYDMVARGVRPDGITFASA 277
Query: 507 LGGCVSHGNLEFGQ 520
L C L G+
Sbjct: 278 LPACSQLEMLSLGR 291
>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 679
Score = 334 bits (857), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 175/571 (30%), Positives = 304/571 (53%), Gaps = 43/571 (7%)
Query: 28 SVVTACAAN-GLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQ 86
S+V + N L+ EAL + + E+P +++W +VI FT A+ M+
Sbjct: 43 SIVISIYTNLKLLHEALLVFKTL-----ESPPVLAWKSVIRCFTDQSLFSRALASFVEMR 97
Query: 87 AEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDML 146
A G P+ SVL +C + L G+ HG+I R G + + N L+++Y + +
Sbjct: 98 ASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYSKLLGID 157
Query: 147 SALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYV 206
S K+F L ++ ++S+N++I+GY
Sbjct: 158 SVRKVFE-----------------------------------LMPRKDVVSYNTVIAGYA 182
Query: 207 DNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDT 266
+ +Y++A M R++ D ++P +FT SVL ++ + KGKEIH I G+ SD
Sbjct: 183 QSGMYEDALRMVREMGTSD-LKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDV 241
Query: 267 FVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSL 326
++G +LV+MY + + ++ F + +++ G+ N A++LF +M+S
Sbjct: 242 YIGSSLVDMYAKSARIEDSERVFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSA 301
Query: 327 DLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHA 386
+ P ++ AC+ LAT+ GKQ+H Y +R G+ ++ I +ALVDMY+KCG+++ A
Sbjct: 302 KVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNIFIASALVDMYSKCGNIQAA 361
Query: 387 RLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHA 446
R + R++ D VS A++ +A+HGHG E ++ F + G +P+ ++F++ L+AC H
Sbjct: 362 RKIFDRMNLHDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHV 421
Query: 447 GSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGA 505
G + +F+ M Y + L+HY + DLL RAG+L EAY+FI K+ + P +W
Sbjct: 422 GLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYDFISKMRVEPTGSVWST 481
Query: 506 LLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRM 565
LL C H NLE + A+++ ++ N G YV++ N++A GRW ++A+ R +++ + +
Sbjct: 482 LLSSCSVHKNLELAEKVAEKIFTIDSENMGAYVLMCNMYASNGRWKEMAKLRLRVRKKGL 541
Query: 566 HKSPGCSWIEDRDEIHKFRASDRSHDRSEEI 596
K P CSWIE +++ H F + DRSH + I
Sbjct: 542 RKKPACSWIEMKNKTHGFVSGDRSHPSMDRI 572
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/387 (25%), Positives = 168/387 (43%), Gaps = 73/387 (18%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K +D +KVF++MP +D VS+N+V+ A +G+ +AL + M + D
Sbjct: 149 MYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSD------- 201
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
L+P+A TLSSVLP + + GKE HGY+
Sbjct: 202 -----------------------------LKPDAFTLSSVLPIFSEYVDVLKGKEIHGYV 232
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R G S+ ++ + LVD+Y + + + ++FS ++ +S N+++ GY +NG EA
Sbjct: 233 IRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISWNSLVAGYVQNGRYNEAL 292
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LF QM V+ P + F SV+ A
Sbjct: 293 RLFRQMVSAKVR------------------------------------PGAVAFSSVIPA 316
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA + +L GK++H + G + F+ ALV+MY + ++ AA+ FD + + +
Sbjct: 317 CAHLATLHLGKQLHGYVLRGGFGRNIFIASALVDMYSKCGNIQAARKIFDRMNLHDEVSW 376
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G + + A+ LF EM + P+ +L+ACS + ++ +
Sbjct: 377 TAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTK 436
Query: 361 C-GYDSDVHIGTALVDMYAKCGSLKHA 386
G + ++ A+ D+ + G L+ A
Sbjct: 437 VYGLNQELEHYAAVADLLGRAGKLEEA 463
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 118/271 (43%), Gaps = 2/271 (0%)
Query: 244 MNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMK 303
+ S + K++HA I S T ++ +Y + L A + F +E+ L K
Sbjct: 18 IKSKSQAKQLHAQFIRTQSLSHT-SASIVISIYTNLKLLHEALLVFKTLESPPVLAWKSV 76
Query: 304 EDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGY 363
F A+ F EM + PD +L +C+ + + G+ VH + +R G
Sbjct: 77 IRCFTDQSLFSRALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGM 136
Query: 364 DSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRR 423
D D++ G AL++MY+K + R ++ + D+VS N ++ YA G ++ + R
Sbjct: 137 DCDLYTGNALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVRE 196
Query: 424 ILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGE 483
+ S +PD + S L + G E + + + + +VD+ +++
Sbjct: 197 MGTSDLKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSAR 256
Query: 484 LGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
+ ++ + DS+ W +L+ G V +G
Sbjct: 257 IEDSERVFSHL-YRRDSISWNSLVAGYVQNG 286
>gi|357128066|ref|XP_003565697.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570-like [Brachypodium distachyon]
Length = 564
Score = 334 bits (857), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 202/615 (32%), Positives = 309/615 (50%), Gaps = 106/615 (17%)
Query: 6 GSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAV 65
G+L A+ VF MP+RD +V+W+A+
Sbjct: 17 GALRHARAVFDEMPDRD------------------------------------VVAWTAM 40
Query: 66 IGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKE---FHGYITR 122
+ G+ NG A+ + RM A G+ PN TLSSVL AC R G E H R
Sbjct: 41 LSGYASNGCHSYALDLFRRMLAAGVGPNEFTLSSVLTAC-RGGAADGGCEPSSLHAVAVR 99
Query: 123 NGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAREL 182
G P+VVN L++ Y C E V E+R+L
Sbjct: 100 RGVDHMPYVVNALIEAYASCE----------------------------EGVGVEESRKL 131
Query: 183 FDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACA 242
FD LG R SW SM++GY +F+ ++ +DGIE + FT L ACA
Sbjct: 132 FDA---LGSGRTAASWTSMVAGYSRWGQEQTGLQLFQTMI-QDGIELSPFTCSIALHACA 187
Query: 243 DMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKM 302
+ +L G+++H L + ++ V +L++MYC +L+ A+ FDEI
Sbjct: 188 SIANLCVGQQLHVLCLRKAFNANLTVANSLIDMYCSCANLLDARRLFDEIP--------- 238
Query: 303 KEDGFEPNVYTWN-------------AMQLFSEMLSLDLTPDIYTVGIILSACSSLATME 349
E N+ TWN A+QL EM +L P+ +T+ I SAC+ LA++
Sbjct: 239 -----ERNLVTWNTMIAWYSQCNHLMALQLLREM---NLQPNCFTLTSITSACAGLASLR 290
Query: 350 RGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYA 409
G+QVH A+R Y D+ + ALVDMY+KCGS+ +A+ + + D +S +M+T Y
Sbjct: 291 FGQQVHGAALRRNYGKDLQMCNALVDMYSKCGSIANAKKMFNMMDYKDKLSWTSMITGYG 350
Query: 410 MHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSL 468
M+G+ E I F ++ +G PDH+ FL + AC H G + G FF M + Y+++P+
Sbjct: 351 MNGYANESIQLFTSMIHAGVHPDHVVFLGLICACNHGGLVDEGWNFFRSMTSEYNLQPNK 410
Query: 469 KHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIE 528
+ Y C+ +LL+RAG L EA++ I ++P APD +WGALLG C H N+E G++AA ++IE
Sbjct: 411 EIYGCVTNLLARAGRLREAFDLIHRMPFAPDETVWGALLGACKMHKNVELGRLAARKIIE 470
Query: 529 LEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDR 588
+ P+ YV+LAN++A +W + A TR+ ++ K G SWI+ D+I+ F +D
Sbjct: 471 INPDRAKTYVLLANIYAAGNKWGEYADTRRLLRGIGSRKEAGTSWIDVTDKIYSFTTADS 530
Query: 589 SHDR---SEEIYTII 600
S + ++E+ I+
Sbjct: 531 SSPQVSLADEVLQIL 545
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 167/360 (46%), Gaps = 32/360 (8%)
Query: 164 NTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLM 223
T+I C G + AR +FD+M R +++W +M+SGY N + A +FR +L
Sbjct: 7 TTLIKSLCAGGALRHARAVFDEMP----DRDVVAWTAMLSGYASNGCHSYALDLFRRMLA 62
Query: 224 RDGIEPTSFTFGSVLIAC----ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRY 279
G+ P FT SVL AC AD + +HA+A+ G+ +V AL+E Y
Sbjct: 63 A-GVGPNEFTLSSVLTACRGGAADGGC--EPSSLHAVAVRRGVDHMPYVVNALIEAYASC 119
Query: 280 QDLVAAQMAFDEIENIENLLGKMKE--------DGFEPNVYTWNAMQLFSEMLS--LDLT 329
++ V + E + + LG + G+ +QLF M+ ++L+
Sbjct: 120 EEGVGVE----ESRKLFDALGSGRTAASWTSMVAGYSRWGQEQTGLQLFQTMIQDGIELS 175
Query: 330 PDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLA 389
P +T I L AC+S+A + G+Q+H +R +++++ + +L+DMY C +L AR
Sbjct: 176 P--FTCSIALHACASIANLCVGQQLHVLCLRKAFNANLTVANSLIDMYCSCANLLDARRL 233
Query: 390 YKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSI 449
+ I +LV+ N M+ Y+ H + + + +P+ + S SAC S+
Sbjct: 234 FDEIPERNLVTWNTMIAWYSQCNH----LMALQLLREMNLQPNCFTLTSITSACAGLASL 289
Query: 450 KTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
+ G + + L+ +VD+ S+ G + A + + D + W +++ G
Sbjct: 290 RFGQQVHGAALRRNYGKDLQMCNALVDMYSKCGSIANAKKMFNMMDY-KDKLSWTSMITG 348
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 61/137 (44%), Gaps = 5/137 (3%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGS+ +AKK+F MM +D +SW S++T NG E+++ M P+ V
Sbjct: 317 MYSKCGSIANAKKMFNMMDYKDKLSWTSMITGYGMNGYANESIQLFTSMIHAGVH-PDHV 375
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
+ +I G +E M +E L+PN V AR +L +E
Sbjct: 376 VFLGLICACNHGGLVDEGWNFFRSMTSEYNLQPNKEIYGCVTNLLARAGRL---REAFDL 432
Query: 120 ITRNGFMSNPFVVNGLV 136
I R F + V L+
Sbjct: 433 IHRMPFAPDETVWGALL 449
>gi|15217508|ref|NP_172412.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806401|sp|Q56XI1.2|PPR25_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09410
gi|3482916|gb|AAC33201.1| Hypothetical protein [Arabidopsis thaliana]
gi|91805759|gb|ABE65608.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332190317|gb|AEE28438.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 705
Score = 334 bits (857), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 188/595 (31%), Positives = 317/595 (53%), Gaps = 60/595 (10%)
Query: 10 DAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGF 69
DA+K+F MP+R+ +SWN +V+ NG + EA + + M N+VSW+A++ G+
Sbjct: 66 DARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPER-----NVVSWTALVKGY 120
Query: 70 TQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNP 129
NG + A + ++M E N + + +L
Sbjct: 121 VHNGKVDVAESLFWKMP----EKNKVSWTVMLIG-------------------------- 150
Query: 130 FVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHL 189
F+ +G +D A K++ K+ ++ ++I G C+ G V EARE+FD+M
Sbjct: 151 FLQDGRID---------DACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMS-- 199
Query: 190 GVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRK 249
+R +I+W +M++GY N+ D+A +F D++ E T ++ S+L+ +
Sbjct: 200 --ERSVITWTTMVTGYGQNNRVDDARKIF-DVMP----EKTEVSWTSMLMGYVQNGRIED 252
Query: 250 GKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEP 309
+E+ + A++ + ++ A+ FD ++ + + E
Sbjct: 253 AEELFEVMPV----KPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHER 308
Query: 310 NVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHI 369
N + A+ LF M + P T+ ILS C+SLA++ GKQVHA +RC +D DV++
Sbjct: 309 NGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYV 368
Query: 370 GTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASG- 428
+ L+ MY KCG L ++L + R + D++ N++++ YA HG G+E + F + SG
Sbjct: 369 ASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGS 428
Query: 429 FRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMVDLLSRAGELGEA 487
+P+ ++F++ LSAC +AG ++ G + ++ M + + VKP HY CMVD+L RAG EA
Sbjct: 429 TKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEA 488
Query: 488 YEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYA 547
E I + + PD+ +WG+LLG C +H L+ + A +LIE+EP N+G Y++L+N++A
Sbjct: 489 MEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQ 548
Query: 548 GRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKF-RASDRSHDRSEEIYTIID 601
GRW+D+A R+ MK R + KSPGCSW E +++H F R SH E I I+D
Sbjct: 549 GRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILD 603
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 116/442 (26%), Positives = 199/442 (45%), Gaps = 44/442 (9%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y K G +D+A+KVF +MPER+ VSW ++V NG V A +M N VS
Sbjct: 89 YMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPE-----KNKVS 143
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W+ ++ GF Q+G ++A L+ M + + ART S++ + ++ +E ++
Sbjct: 144 WTVMLIGFLQDGRIDDACK-LYEMIPDK-DNIART--SMIHGLCKEGRVDEAREIFDEMS 199
Query: 122 RNGFMSNPFVVNGL-----VDVYRRCGDMLS----------------------ALKIFSK 154
++ +V G VD R+ D++ A ++F
Sbjct: 200 ERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEV 259
Query: 155 FSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEA 214
+K ++CN +I G + G +A+AR +FD M+ +R SW ++I + N EA
Sbjct: 260 MPVKPVIACNAMISGLGQKGEIAKARRVFDSMK----ERNDASWQTVIKIHERNGFELEA 315
Query: 215 FSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVE 274
+F L+ + G+ PT T S+L CA + SL GK++HA + D +V L+
Sbjct: 316 LDLF-ILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMT 374
Query: 275 MYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEM-LSLDLTPDIY 333
MY + +LV +++ FD + + ++ G+ + A+++F EM LS P+
Sbjct: 375 MYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEV 434
Query: 334 TVGIILSACSSLATMERGKQVH-AYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKR 392
T LSACS +E G +++ + G +VDM + G A
Sbjct: 435 TFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDS 494
Query: 393 IST-PDLVSQNAMLTAYAMHGH 413
++ PD ++L A H
Sbjct: 495 MTVEPDAAVWGSLLGACRTHSQ 516
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 151/298 (50%), Gaps = 13/298 (4%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y + G ++DA+++F++MP + ++ N++++ G + +A + M ++ S
Sbjct: 244 YVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERND-----AS 298
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W VI +NG++ EA+ + MQ +G+ P TL S+L CA L L GK+ H +
Sbjct: 299 WQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLV 358
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
R F + +V + L+ +Y +CG+++ + IF +F K+ + N+II GY +G EA +
Sbjct: 359 RCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALK 418
Query: 182 LFDQMEHLG-VQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+F +M G + +++ + +S + +E ++ + G++P + + ++
Sbjct: 419 VFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMV-- 476
Query: 241 CADMNSLRKGKEIHALAI--ALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
DM R G+ A+ + ++ ++ D V G+L+ + L A+ ++ IE
Sbjct: 477 --DMLG-RAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIE 531
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 96/455 (21%), Positives = 175/455 (38%), Gaps = 59/455 (12%)
Query: 129 PFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEH 188
P N + R G + A K+F K+ S N+++ GY N +AR+LFD+M
Sbjct: 17 PPTANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMP- 75
Query: 189 LGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLR 248
R IISWN ++SGY+ N DEA +F + R+ + T+ G V D+
Sbjct: 76 ---DRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESL 132
Query: 249 KGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKE---- 304
K ++ + F+ ++ C+ +++ + D I + G KE
Sbjct: 133 FWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDK---DNIARTSMIHGLCKEGRVD 189
Query: 305 -------DGFEPNVYTWNAMQL-FSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHA 356
+ E +V TW M + + +D I+ V M +V
Sbjct: 190 EAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDV------------MPEKTEVSW 237
Query: 357 YAIRCGYDSDVHIG-----------------TALVDMYAKCGSLKHARLAYKRISTPDLV 399
++ GY + I A++ + G + AR + + +
Sbjct: 238 TSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDA 297
Query: 400 SQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM 459
S ++ + +G E + F + G RP + +S LS C S+ G + +
Sbjct: 298 SWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQL 357
Query: 460 AYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFG 519
+ + ++ + + GEL ++ + P + D +MW +++ G SHG G
Sbjct: 358 VRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFP-SKDIIMWNSIISGYASHG---LG 413
Query: 520 QIAADRLIEL------EPNNTGNYVMLANLFAYAG 548
+ A E+ +PN +V + +YAG
Sbjct: 414 EEALKVFCEMPLSGSTKPNEV-TFVATLSACSYAG 447
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG L +K +F P +D + WNS+++ A++GL EAL+ M + PN V
Sbjct: 375 MYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEV 434
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEP 92
++ A + + G EE + + M++ G++P
Sbjct: 435 TFVATLSACSYAGMVEEGLKIYESMESVFGVKP 467
>gi|224057824|ref|XP_002299342.1| predicted protein [Populus trichocarpa]
gi|222846600|gb|EEE84147.1| predicted protein [Populus trichocarpa]
Length = 684
Score = 334 bits (856), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 197/618 (31%), Positives = 304/618 (49%), Gaps = 105/618 (16%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGSL DA+KVF M ER NLV
Sbjct: 54 MYCKCGSLADARKVFDEMRER------------------------------------NLV 77
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ +I + +NG ++ M M +PN T L + L +GK+ H +
Sbjct: 78 SWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRSLLNPSGLEIGKQIHSHA 137
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R+G SN V + ++Y +CG + A +F K S KN V+ I+VGY + +A
Sbjct: 138 IRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAWTGIMVGYTQAERQMDAL 197
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LF +M + +G+E + F VL A
Sbjct: 198 ALFAKM------------------------------------VNEGVELDEYVFSIVLKA 221
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA + L G++IH + LGL+S+ VG LV+ Y + +L +A AF+ I
Sbjct: 222 CAGLEELNFGRQIHGHIVKLGLESEVSVGTPLVDFYVKCSNLESATKAFEWIS------- 274
Query: 301 KMKEDGFEPNVYTWNA-------MQLFSEML---------SLDLTPDIYTVGIILSACSS 344
EPN +W+A M F E L S+D+ YT I ACS+
Sbjct: 275 -------EPNDVSWSALITGYCQMGEFEEALKTFESLRTRSVDINSFTYTS--IFQACSA 325
Query: 345 LATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAM 404
LA G Q HA AI+ + H +A++ MY++CG L +A ++ I PD V+ A+
Sbjct: 326 LADFNSGAQAHADAIKSSLVAYQHGESAMITMYSRCGRLDYATRVFESIDDPDAVAWTAI 385
Query: 405 LTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YD 463
+ YA G+ E + FRR+ G RP+ ++F++ L+AC H+G + G ++ + M+ Y
Sbjct: 386 IAGYAYQGNAPEALKLFRRMQDCGVRPNAVTFIAVLTACSHSGLVIEGRQYLESMSSNYG 445
Query: 464 VKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAA 523
V ++ HY CMVD+ SRAG L EA E I+ +P +PD++ W LLGGC ++ NLE G++AA
Sbjct: 446 VATTIDHYDCMVDIYSRAGFLQEALELIRSMPFSPDAMSWKCLLGGCWTYRNLEIGELAA 505
Query: 524 DRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKF 583
+ L +L+P +T Y+++ NL+A G+W + A R+ M +R + K CSWI + ++H+F
Sbjct: 506 ENLFQLDPEDTAGYILMFNLYASFGKWKEAANVRKMMAERNLRKELSCSWITVKGKVHRF 565
Query: 584 RASDRSHDRSEEIYTIID 601
D+ H ++EEIY+ ++
Sbjct: 566 IVGDKHHPQTEEIYSKLE 583
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 121/438 (27%), Positives = 208/438 (47%), Gaps = 51/438 (11%)
Query: 85 MQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNP--FVVNGLVDVYRRC 142
M+ G+ + R+ + AC +++ L G+ FH + R + NP F+ N ++ +Y +C
Sbjct: 1 MEDAGISVSPRSYKCLFEACGKIKSLFDGRLFHEQMQRT--VKNPPEFLENSVLKMYCKC 58
Query: 143 GDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMI 202
G + A K+F + +N VS NTII Y ENG
Sbjct: 59 GSLADARKVFDEMRERNLVSWNTIISAYAENG---------------------------- 90
Query: 203 SGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGL 262
++D+ F MF ++L + +P T+ L + + + L GK+IH+ AI GL
Sbjct: 91 -------VFDKGFCMFSNMLELE-TKPNGSTYIGFLRSLLNPSGLEIGKQIHSHAIRSGL 142
Query: 263 QSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSE 322
S+ V A+ MY + L A++ F+++ + G+ +A+ LF++
Sbjct: 143 GSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAWTGIMVGYTQAERQMDALALFAK 202
Query: 323 MLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGS 382
M++ + D Y I+L AC+ L + G+Q+H + ++ G +S+V +GT LVD Y KC +
Sbjct: 203 MVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGLESEVSVGTPLVDFYVKCSN 262
Query: 383 LKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSA 442
L+ A A++ IS P+ VS +A++T Y G +E + F + + ++ S A
Sbjct: 263 LESATKAFEWISEPNDVSWSALITGYCQMGEFEEALKTFESLRTRSVDINSFTYTSIFQA 322
Query: 443 CVHAGSIKTGSEFFDLMAYYD-VKPSLKHY----TCMVDLLSRAGELGEAYEFIKKIPMA 497
C +G++ A+ D +K SL Y + M+ + SR G L A + I
Sbjct: 323 CSALADFNSGAQ-----AHADAIKSSLVAYQHGESAMITMYSRCGRLDYATRVFESID-D 376
Query: 498 PDSVMWGALLGGCVSHGN 515
PD+V W A++ G GN
Sbjct: 377 PDAVAWTAIIAGYAYQGN 394
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 135/309 (43%), Gaps = 35/309 (11%)
Query: 226 GIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAA 285
GI + ++ + AC + SL G+ H F+ ++++MYC+ L A
Sbjct: 5 GISVSPRSYKCLFEACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGSLADA 64
Query: 286 QMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQ--------------LFSEMLSLDLTPD 331
+ FDE+ E N+ +WN + +FS ML L+ P+
Sbjct: 65 RKVFDEMR--------------ERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPN 110
Query: 332 IYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYK 391
T L + + + +E GKQ+H++AIR G S+ + TA+ +MY KCG L+ A L ++
Sbjct: 111 GSTYIGFLRSLLNPSGLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFE 170
Query: 392 RISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKT 451
++S + V+ ++ Y + +A F +++ G D F L AC +
Sbjct: 171 KMSEKNAVAWTGIMVGYTQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNF 230
Query: 452 GSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGEL---GEAYEFIKKIPMAPDSVMWGALLG 508
G + + ++ + T +VD + L +A+E+I + P+ V W AL+
Sbjct: 231 GRQIHGHIVKLGLESEVSVGTPLVDFYVKCSNLESATKAFEWISE----PNDVSWSALIT 286
Query: 509 GCVSHGNLE 517
G G E
Sbjct: 287 GYCQMGEFE 295
>gi|115456537|ref|NP_001051869.1| Os03g0844000 [Oryza sativa Japonica Group]
gi|41469627|gb|AAS07350.1| putative pentatricopeptide repeat domain contianing protein [Oryza
sativa Japonica Group]
gi|113550340|dbj|BAF13783.1| Os03g0844000 [Oryza sativa Japonica Group]
gi|215686748|dbj|BAG89598.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 702
Score = 334 bits (856), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 194/643 (30%), Positives = 322/643 (50%), Gaps = 76/643 (11%)
Query: 22 DCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGM 81
+C N +V + G + +AL+ +RM N+V+W++V+ G+T+NG E A+ M
Sbjct: 51 ECKRLNRLVKS----GRLADALDLFDRMPR-----KNVVAWTSVMSGYTRNGRPEAALAM 101
Query: 82 LFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRR 141
M G+ PN ++ L ACA L L G++ H R GF + ++ + L+++Y R
Sbjct: 102 FADMVESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSR 161
Query: 142 CGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQM--------EH----- 188
CG + +A ++F + + V ++I +C NG A E QM EH
Sbjct: 162 CGSLPAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTI 221
Query: 189 -------LGVQ-------------RGIISWNSMISGYVDNSLYDEAFSMFRDL------- 221
LG Q + + S ++I Y N + A ++F L
Sbjct: 222 LTACPRVLGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVS 281
Query: 222 -----------------------LMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAI 258
++ +G++P F VL AC S+ G+++H AI
Sbjct: 282 WCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACG---SIGLGRQLHCSAI 338
Query: 259 ALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQ 318
L +D V AL+ MY R + + ++IEN + + N + A+
Sbjct: 339 KHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIA 398
Query: 319 LFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYA 378
L +M S TP+ Y +LS+C+ +A++++G Q H A++ G DS++ G AL++MY+
Sbjct: 399 LLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYS 458
Query: 379 KCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLS 438
KCG + ARLA+ + T D+ S N+++ +A HG + + F ++ ++G +PD +FL
Sbjct: 459 KCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLG 518
Query: 439 ALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMA 497
L C H+G ++ G FF LM Y P+ HY CM+D+L R G EA I +P
Sbjct: 519 VLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFE 578
Query: 498 PDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTR 557
PD+++W LL C H NL+ G++AADRL+EL ++ +YV+++N++A G W D + R
Sbjct: 579 PDALIWKTLLASCKLHRNLDIGKLAADRLMELSDRDSASYVLMSNIYAMHGEWEDARKVR 638
Query: 558 QKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTII 600
++M + + K GCSWIE +E+H F + D SH S+ IY ++
Sbjct: 639 RRMDETGVKKDAGCSWIEINNEVHTFASRDMSHPNSDSIYQML 681
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 126/299 (42%), Gaps = 43/299 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYG+ G +++ + + + D VSW + ++A NG +A+ L +M S
Sbjct: 355 MYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHS--------- 405
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
EG PN SSVL +CA + L G +FH
Sbjct: 406 ---------------------------EGFTPNGYAFSSVLSSCADVASLDQGMQFHCLA 438
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G S N L+++Y +CG M SA F + S N++I G+ ++G+ +A
Sbjct: 439 LKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKAL 498
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
E+F +M G++ ++ ++ G + + +E FR LM I+ SFT A
Sbjct: 499 EVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFR--LM---IDQYSFTPAPSHYA 553
Query: 241 CADMNSLRKGKEIHALAIA--LGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
C R G+ AL + + + D + L+ +++L ++A D + + +
Sbjct: 554 CMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLASCKLHRNLDIGKLAADRLMELSD 612
>gi|359492699|ref|XP_002280968.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g19720-like [Vitis vinifera]
Length = 1545
Score = 334 bits (856), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 201/708 (28%), Positives = 333/708 (47%), Gaps = 144/708 (20%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGSL +A+KVF M ER NL
Sbjct: 128 MYAKCGSLGEARKVFGEMRER------------------------------------NLY 151
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+WSA+IG +++ E + F M +G+ P+ L +L AC GK H +
Sbjct: 152 AWSAMIGAYSREQMWREVVQHFFFMMEDGIVPDEFLLPKILQACGNCGDAETGKLIHSLV 211
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R G N V N ++ VY +CG + A + F ++ VS N+II GYC+ G + ++
Sbjct: 212 IRCGMNFNIRVSNSILAVYAKCGRLSCARRFFENMDYRDRVSWNSIITGYCQKGELEKSH 271
Query: 181 ELFDQMEHLGVQRGIISWN-----------------------------------SMISGY 205
+LF++M+ G++ G+++WN SMISG+
Sbjct: 272 QLFEKMQEEGIEPGLVTWNILINSYSQSGKCDDAMELMKKMESFRIVPDVFTWTSMISGF 331
Query: 206 VDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSD 265
N+ +A +FR++L+ GIEP T S + ACA + +L+KG E+H++A+ +G D
Sbjct: 332 AQNNRRSQALELFREMLLA-GIEPNGVTVTSGISACASLKALKKGMELHSVAVKIGCVED 390
Query: 266 TFVGGALVEMYCRYQDLVAAQMAFDEIENIE---------------------NLLGKMKE 304
VG +L++MY + +L A+ FD I + +L KM E
Sbjct: 391 LLVGNSLIDMYSKSGELEDARRVFDMILKKDVYTWNSMIGGYCQAGYCGKAYDLFIKMHE 450
Query: 305 DGFEPNVYTWNAM----------------------------------------------- 317
PNV TWNAM
Sbjct: 451 SDVPPNVVTWNAMISGYIQNGDEDQAMDLFHRMEKDGLIKRDTASWNSLIAGYLQNGHKN 510
Query: 318 ---QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALV 374
+F +M S + P+ T+ IL AC++L ++ K++H +R S++ + L+
Sbjct: 511 KALGIFRQMQSFCIRPNSVTMLSILPACANLVAAKKVKEIHGCILRRNLGSELSVANCLI 570
Query: 375 DMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHI 434
D YAK G++ +A+ ++ IS+ D++S N+++ Y +HG + F ++ G +P
Sbjct: 571 DTYAKSGNIVYAQTIFQGISSKDIISWNSLIAGYVLHGCSDSALDLFDQMTKMGVKPSRG 630
Query: 435 SFLSALSACVHAGSIKTGSEFFD-LMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKK 493
+FLS + A +G + G + F +M Y + P L+H++ M+DLL R+G+LGEA EFI+
Sbjct: 631 TFLSIIYAFSLSGMVDKGKQVFSSMMEDYQILPGLEHHSAMIDLLGRSGKLGEAIEFIED 690
Query: 494 IPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDL 553
+ + PDS +W ALL HGN+ A + L+ELEP+N + + ++A +G++ D+
Sbjct: 691 MAIEPDSCIWAALLTASKIHGNIGLAIRAGECLLELEPSNFSIHQQILQMYALSGKFEDV 750
Query: 554 ARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
++ R+ K + GCSWIE ++ +H F A DRS + +++ I+
Sbjct: 751 SKLRKSEKRSETKQPLGCSWIEAKNIVHTFVADDRSRPYFDFLHSWIE 798
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 110/461 (23%), Positives = 186/461 (40%), Gaps = 111/461 (24%)
Query: 71 QNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMS--N 128
+NG +AI L + G T +L +C LG++ H R G + N
Sbjct: 62 KNGRLADAIACLDAIAQGGSNVKPNTYMQLLQSCIDQGSAELGRKLH---ARIGLLEEMN 118
Query: 129 PFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEH 188
PFV LV +Y +CG + EAR++F +M
Sbjct: 119 PFVETKLVSMYAKCGSL-------------------------------GEARKVFGEMR- 146
Query: 189 LGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLR 248
+R + +W++MI Y ++ E F +M DGI P F +L AC +
Sbjct: 147 ---ERNLYAWSAMIGAYSREQMWREVVQHFF-FMMEDGIVPDEFLLPKILQACGNCGDAE 202
Query: 249 KGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFD------------------ 290
GK IH+L I G+ + V +++ +Y + L A+ F+
Sbjct: 203 TGKLIHSLVIRCGMNFNIRVSNSILAVYAKCGRLSCARRFFENMDYRDRVSWNSIITGYC 262
Query: 291 ---EIENIENLLGKMKEDGFEPNVYTWN--------------AMQLFSEMLSLDLTPDIY 333
E+E L KM+E+G EP + TWN AM+L +M S + PD++
Sbjct: 263 QKGELEKSHQLFEKMQEEGIEPGLVTWNILINSYSQSGKCDDAMELMKKMESFRIVPDVF 322
Query: 334 -----------------------------------TVGIILSACSSLATMERGKQVHAYA 358
TV +SAC+SL +++G ++H+ A
Sbjct: 323 TWTSMISGFAQNNRRSQALELFREMLLAGIEPNGVTVTSGISACASLKALKKGMELHSVA 382
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGI 418
++ G D+ +G +L+DMY+K G L+ AR + I D+ + N+M+ Y G+ +
Sbjct: 383 VKIGCVEDLLVGNSLIDMYSKSGELEDARRVFDMILKKDVYTWNSMIGGYCQAGYCGKAY 442
Query: 419 AHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM 459
F ++ S P+ +++ + +S + G + F M
Sbjct: 443 DLFIKMHESDVPPNVVTWNAMISGYIQNGDEDQAMDLFHRM 483
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 116/243 (47%), Gaps = 11/243 (4%)
Query: 327 DLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVH--IGTALVDMYAKCGSLK 384
++ P+ Y +L +C + E G+++HA R G +++ + T LV MYAKCGSL
Sbjct: 82 NVKPNTYMQ--LLQSCIDQGSAELGRKLHA---RIGLLEEMNPFVETKLVSMYAKCGSLG 136
Query: 385 HARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACV 444
AR + + +L + +AM+ AY+ +E + HF ++ G PD L AC
Sbjct: 137 EARKVFGEMRERNLYAWSAMIGAYSREQMWREVVQHFFFMMEDGIVPDEFLLPKILQACG 196
Query: 445 HAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWG 504
+ G +TG L+ + +++ ++ + ++ G L A F + + D V W
Sbjct: 197 NCGDAETGKLIHSLVIRCGMNFNIRVSNSILAVYAKCGRLSCARRFFENMDYR-DRVSWN 255
Query: 505 ALLGGCVSHGNLEFGQIAADRLIE--LEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKD 562
+++ G G LE +++ E +EP + +L N ++ +G+ D +KM+
Sbjct: 256 SIITGYCQKGELEKSHQLFEKMQEEGIEPGLV-TWNILINSYSQSGKCDDAMELMKKMES 314
Query: 563 RRM 565
R+
Sbjct: 315 FRI 317
>gi|218193589|gb|EEC76016.1| hypothetical protein OsI_13171 [Oryza sativa Indica Group]
Length = 950
Score = 334 bits (856), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 204/612 (33%), Positives = 320/612 (52%), Gaps = 50/612 (8%)
Query: 4 KCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWS 63
K G + A+++F MPER VS+ ++V A G V +A+E L R L ++ ++
Sbjct: 160 KAGDIVSARRLFDGMPERSVVSYTTMVDALMKRGSVRDAVE-LYRQCPL----CSVPFFT 214
Query: 64 AVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRN 123
A+I GF N ++A+G+ M + G+ PN TL SV+ AC + L G ++
Sbjct: 215 AMIAGFVLNELPKDALGVFHEMLSCGVSPNEITLVSVIKACIGAGEFDLAMSIVGLAMKS 274
Query: 124 GFM-SNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAREL 182
+ N V N L+ +Y R GD +A ++F + +++ VS ++ Y E G++ AR +
Sbjct: 275 NLLDKNLGVRNSLITLYLRKGDADAARRMFDEMEVRDVVSWTALLDVYAELGDLEGARRV 334
Query: 183 FDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACA 242
D+M +R +SW ++++ + EA S++ +L DG P F SVL ACA
Sbjct: 335 LDEMP----ERNEVSWGTLVARHEQKGNAKEAVSLYSQMLA-DGCRPNISCFSSVLGACA 389
Query: 243 DMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI--ENI----- 295
+ LR G++IH + + ++ FV AL++MYC+ + L AQM F + +NI
Sbjct: 390 SLQDLRSGRKIHNQTLKMACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLPQKNIVCWNS 449
Query: 296 --------------ENLLGKMKEDGFEPNVYTWN--------------AMQLFSEMLSLD 327
E L KM NV +WN A++ F ML+
Sbjct: 450 LISGYSNNSKMVEAEELFKKMPAR----NVASWNSIISGYAQNRQFIDALKSFHAMLASG 505
Query: 328 LTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHAR 387
+P T +L AC+SL ++E GK VHA I+ G + +GTAL DMYAK G L ++
Sbjct: 506 QSPGEITFSSVLLACASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAKSGDLDSSK 565
Query: 388 LAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAG 447
+ + + V+ AM+ A +G +E I F ++++G P+ +FL+ L AC H+G
Sbjct: 566 RVFYEMPKRNDVAWTAMIQGLAENGFAEESILLFEDMISAGITPNEQTFLAILFACSHSG 625
Query: 448 SIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALL 507
++ +F++M + P KHYTCMVD+L+RAG L EA + + KI ++ W ALL
Sbjct: 626 LVEHAMHYFEMMQACGISPKAKHYTCMVDVLARAGHLAEAEDLLLKIESKSEANSWAALL 685
Query: 508 GGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHK 567
C + N E G+ AA RL EL+ +NT YV+L+N++A G+W D A R MK + K
Sbjct: 686 SACNIYRNKEMGERAAKRLQELDKDNTAGYVLLSNMYASCGKWKDAAEMRILMKGINLKK 745
Query: 568 SPGCSWIEDRDE 579
GCSW++ RDE
Sbjct: 746 DGGCSWVQIRDE 757
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 131/425 (30%), Positives = 197/425 (46%), Gaps = 42/425 (9%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y + G L+ A++V MPER+ VSW ++V G EA+ +M + D PN+
Sbjct: 321 VYAELGDLEGARRVLDEMPERNEVSWGTLVARHEQKGNAKEAVSLYSQMLA-DGCRPNIS 379
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+S+V+G ACA LQ L G++ H
Sbjct: 380 CFSSVLG-----------------------------------ACASLQDLRSGRKIHNQT 404
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ +N FV + L+D+Y +C + A IF KN V N++I GY N + EA
Sbjct: 405 LKMACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLPQKNIVCWNSLISGYSNNSKMVEAE 464
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
ELF +M R + SWNS+ISGY N + +A F +L G P TF SVL+A
Sbjct: 465 ELFKKMP----ARNVASWNSIISGYAQNRQFIDALKSFHAMLA-SGQSPGEITFSSVLLA 519
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA + SL GK +HA I LG++ FVG AL +MY + DL +++ F E+ ++
Sbjct: 520 CASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAKSGDLDSSKRVFYEMPKRNDVAW 579
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G N + ++ LF +M+S +TP+ T IL ACS +E
Sbjct: 580 TAMIQGLAENGFAEESILLFEDMISAGITPNEQTFLAILFACSHSGLVEHAMHYFEMMQA 639
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHAR-LAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
CG T +VD+ A+ G L A L K S + S A+L+A ++ + + G
Sbjct: 640 CGISPKAKHYTCMVDVLARAGHLAEAEDLLLKIESKSEANSWAALLSACNIYRNKEMGER 699
Query: 420 HFRRI 424
+R+
Sbjct: 700 AAKRL 704
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 119/484 (24%), Positives = 215/484 (44%), Gaps = 74/484 (15%)
Query: 127 SNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQM 186
++PF + +V + + GD++SA ++F ++ VS T++ + G+V +A EL+ Q
Sbjct: 146 ASPFAYDFMVREHVKAGDIVSARRLFDGMPERSVVSYTTMVDALMKRGSVRDAVELYRQC 205
Query: 187 EHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNS 246
V + +MI+G+V N L +A +F ++L G+ P T SV+ AC
Sbjct: 206 PLCSVP----FFTAMIAGFVLNELPKDALGVFHEML-SCGVSPNEITLVSVIKACIGAGE 260
Query: 247 LRKGKEIHALAIALGLQSDTF-VGGALVEMYCRYQDLVAAQMAFDEIE-----------N 294
I LA+ L V +L+ +Y R D AA+ FDE+E +
Sbjct: 261 FDLAMSIVGLAMKSNLLDKNLGVRNSLITLYLRKGDADAARRMFDEMEVRDVVSWTALLD 320
Query: 295 IENLLGKMK------EDGFEPNVYTW--------------NAMQLFSEMLSLDLTPDIYT 334
+ LG ++ ++ E N +W A+ L+S+ML+ P+I
Sbjct: 321 VYAELGDLEGARRVLDEMPERNEVSWGTLVARHEQKGNAKEAVSLYSQMLADGCRPNISC 380
Query: 335 VGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLA----- 389
+L AC+SL + G+++H ++ ++V + +AL+DMY KC L A++
Sbjct: 381 FSSVLGACASLQDLRSGRKIHNQTLKMACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLP 440
Query: 390 --------------------------YKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRR 423
+K++ ++ S N++++ YA + + + F
Sbjct: 441 QKNIVCWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSIISGYAQNRQFIDALKSFHA 500
Query: 424 ILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGE 483
+LASG P I+F S L AC S++ G + +K S+ T + D+ +++G+
Sbjct: 501 MLASGQSPGEITFSSVLLACASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAKSGD 560
Query: 484 LGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIE--LEPNNTGNYVMLA 541
L + ++P D V W A++ G +G E + + +I + PN LA
Sbjct: 561 LDSSKRVFYEMPKRND-VAWTAMIQGLAENGFAEESILLFEDMISAGITPNEQ---TFLA 616
Query: 542 NLFA 545
LFA
Sbjct: 617 ILFA 620
>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
Length = 813
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 203/606 (33%), Positives = 307/606 (50%), Gaps = 68/606 (11%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC L DA +F MP RD LV
Sbjct: 169 MYVKCACLPDAAHIFATMPARD------------------------------------LV 192
Query: 61 SWSAVIGGFTQNGYDEEAIGMLF--RMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHG 118
+W+A++ G+ +G A+ L +MQ L PNA TL ++LP A+ L+ G H
Sbjct: 193 AWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHA 252
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
Y R SN + L D G +L ++ Y + G++
Sbjct: 253 YRIRACLHSNRNSKSKLTD-----GVLLG----------------TALLDMYAKCGSLLY 291
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRD--GIEPTSFTFGS 236
AR +FD M R ++W+++I G+V S +AF +F+ +L + + PTS S
Sbjct: 292 ARRVFDAMP----ARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSI--AS 345
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
L ACA ++ LR G+++HAL G+ +D G +L+ MY + + A FDE+ +
Sbjct: 346 ALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKD 405
Query: 297 NLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHA 356
+ G+ N A +F +M + ++ PD T+ ++ ACS LA ++ G+ H
Sbjct: 406 TVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHG 465
Query: 357 YAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKE 416
I G S+ I AL+DMYAKCG + +R + + + D+VS N M+ Y +HG GKE
Sbjct: 466 SVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKE 525
Query: 417 GIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMV 475
A F + GF PD ++F+ LSAC H+G + G +F +M + Y + P ++HY CMV
Sbjct: 526 ATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMRHGYGLTPRMEHYICMV 585
Query: 476 DLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTG 535
DLLSR G L EAYEFI+ +P+ D +W ALLG C + N++ G+ + + EL P TG
Sbjct: 586 DLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTG 645
Query: 536 NYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEE 595
N+V+L+N+++ AGR+ + A R K + KSPGCSWIE +H F D+SH +S E
Sbjct: 646 NFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPE 705
Query: 596 IYTIID 601
IY +D
Sbjct: 706 IYRELD 711
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 112/496 (22%), Positives = 209/496 (42%), Gaps = 59/496 (11%)
Query: 56 TPNLVSWSAVIGGFTQNGYDEEAIGMLF--RMQAEGLEPNARTLSSVLPACARLQKLSLG 113
+P++ +++ +I ++ + A G+ RM + PN T L AC+ L G
Sbjct: 85 SPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPFALKACSALADHHCG 144
Query: 114 KEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCEN 173
+ H + G ++ FV L+D+Y +C + A IF+ ++ V+ N ++ GY +
Sbjct: 145 RAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHH 204
Query: 174 GNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMR-DGIEPTSF 232
G +Y A + + M+ + P +
Sbjct: 205 G-----------------------------------MYHHAVAHLLSMQMQMHRLRPNAS 229
Query: 233 TFGSVLIACADMNSLRKGKEIHALAIALGLQSD----------TFVGGALVEMYCRYQDL 282
T ++L A +L +G +HA I L S+ +G AL++MY + L
Sbjct: 230 TLVALLPLLAQQGALAQGTSVHAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSL 289
Query: 283 VAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLD---LTPDIYTVGIIL 339
+ A+ FD + + GF A LF ML+ L+P ++ L
Sbjct: 290 LYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPT--SIASAL 347
Query: 340 SACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLV 399
AC+SL + G+Q+HA + G +D+ G +L+ MYAK G + A + ++ D V
Sbjct: 348 RACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTV 407
Query: 400 SQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM 459
S +A+++ Y +G +E F+++ A PD + +S + AC H +++ G +
Sbjct: 408 SYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSV 467
Query: 460 AYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFG 519
+ ++D+ ++ G + + + +P + D V W ++ G HG G
Sbjct: 468 IIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMP-SRDIVSWNTMIAGYGIHG---LG 523
Query: 520 QIAADRLIELEPNNTG 535
+ A +E+ NN G
Sbjct: 524 KEATALFLEM--NNLG 537
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 173/365 (47%), Gaps = 25/365 (6%)
Query: 170 YCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEA--FSMFRDLLMRDGI 227
+ +G+++ A LFDQ+ V+ ++N +I Y +S A ++R +L R +
Sbjct: 67 HIASGHLSRAHHLFDQIPSPDVR----TYNDLIRAYSSSSPTAAADGLHLYRRML-RHRV 121
Query: 228 EPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQM 287
P ++TF L AC+ + G+ IH AI GLQ+D FV AL++MY + L A
Sbjct: 122 APNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAH 181
Query: 288 AFDEIENIENLLGKMKEDGFEPN-VYTWNAMQLFSEMLSLD-LTPDIYTVGIILSACSSL 345
F + + + G+ + +Y L S + + L P+ T+ +L +
Sbjct: 182 IFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQ 241
Query: 346 ATMERGKQVHAYAIRCGYDSD----------VHIGTALVDMYAKCGSLKHARLAYKRIST 395
+ +G VHAY IR S+ V +GTAL+DMYAKCGSL +AR + +
Sbjct: 242 GALAQGTSVHAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPA 301
Query: 396 PDLVSQNAMLTAYAMHGHGKEGIAHFRRILASG---FRPDHISFLSALSACVHAGSIKTG 452
+ V+ +A++ + + + F+ +LA G P I+ SAL AC ++ G
Sbjct: 302 RNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIA--SALRACASLDHLRMG 359
Query: 453 SEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVS 512
+ L+A V L ++ + ++AG + +A ++ + D+V + AL+ G V
Sbjct: 360 EQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVK-DTVSYSALVSGYVQ 418
Query: 513 HGNLE 517
+G E
Sbjct: 419 NGRAE 423
>gi|449443327|ref|XP_004139431.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Cucumis sativus]
gi|449521082|ref|XP_004167560.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Cucumis sativus]
Length = 583
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 185/541 (34%), Positives = 300/541 (55%), Gaps = 41/541 (7%)
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
++++I G+ + + A+ + RM +G P+ T +L AC+ G++ HG +
Sbjct: 73 FNSLINGYVGGEFPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSGSREGRQVHGVVV 132
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
+ G +++ +V N L+ Y CGD SC A +
Sbjct: 133 KLGLLADHYVQNSLIRCYGACGDF----------------SC---------------AGK 161
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
+FD+M + R ++SWNS+ISG++ +DEA S+F R +EP+ T SVL AC
Sbjct: 162 VFDEM----LVRDVVSWNSLISGFMKAGHFDEAISVF----FRMDVEPSMTTLVSVLAAC 213
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK 301
A L GK IH + I + + +G A+++MY + A+ FDE+ + +
Sbjct: 214 ARNGDLCTGKGIHGV-IERRFKVNLVLGNAMLDMYVKNGCFYEAKNIFDELPTRDIVSWT 272
Query: 302 MKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRC 361
+ G + + +++LFS M +L ++PD + +LSAC+SL T++ G VH Y +
Sbjct: 273 IMITGLVQSDHPKQSLELFSMMRTLGISPDAIILTSVLSACASLGTLDFGTWVHEYINQR 332
Query: 362 GYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHF 421
G D+HIGTA+VDMYAKCG ++ A + +S + + NA+L AMHG E + F
Sbjct: 333 GIKWDIHIGTAIVDMYAKCGCIEMALKIFYSMSQRNTFTWNALLCGLAMHGLVHEALNLF 392
Query: 422 RRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLLSR 480
++ SG +P+ I+FL+ L+AC H G + G ++FD M+ Y++ P L+HY CM+DL R
Sbjct: 393 EVMIISGVKPNEITFLAILTACCHCGLVDEGRKYFDNMSKLYNLLPKLEHYGCMIDLFCR 452
Query: 481 AGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVML 540
AG L EA E + +PM PD ++WG LL C + GN+E D ++EL+ +++G +V+L
Sbjct: 453 AGLLEEAVELARTMPMKPDVLIWGLLLNACTTVGNIELSHRIQDYILELDHDDSGVFVLL 512
Query: 541 ANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTII 600
+N+ A RWS++ R R+ MKDR + K+PG S IE + H+F D SH ++EEIY ++
Sbjct: 513 SNISAINQRWSNVTRLRRLMKDRGVRKAPGSSVIEVDGKAHEFVVGDISHLQTEEIYKVL 572
Query: 601 D 601
+
Sbjct: 573 N 573
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 103/407 (25%), Positives = 184/407 (45%), Gaps = 39/407 (9%)
Query: 108 QKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTII 167
+ L + ++ H + +G + + FV + ++ F+ F + +C+
Sbjct: 16 KNLRIFRQIHAQLVTSGLVYDDFVTS-------------KVMEFFANFVEYGDYACD--- 59
Query: 168 VGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGI 227
Y E GN + G +NS+I+GYV A S++R ++ RDG
Sbjct: 60 --YLEQGNT---------------RLGSFPFNSLINGYVGGEFPQMAVSVYRRMV-RDGF 101
Query: 228 EPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQM 287
P FTF +L AC++ + R+G+++H + + LGL +D +V +L+ Y D A
Sbjct: 102 VPDMFTFPVLLKACSNFSGSREGRQVHGVVVKLGLLADHYVQNSLIRCYGACGDFSCAGK 161
Query: 288 AFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLAT 347
FDE+ + + GF + A+ +F M D+ P + T+ +L+AC+
Sbjct: 162 VFDEMLVRDVVSWNSLISGFMKAGHFDEAISVFFRM---DVEPSMTTLVSVLAACARNGD 218
Query: 348 MERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTA 407
+ GK +H I + ++ +G A++DMY K G A+ + + T D+VS M+T
Sbjct: 219 LCTGKGIHG-VIERRFKVNLVLGNAMLDMYVKNGCFYEAKNIFDELPTRDIVSWTIMITG 277
Query: 408 YAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPS 467
H K+ + F + G PD I S LSAC G++ G+ + + +K
Sbjct: 278 LVQSDHPKQSLELFSMMRTLGISPDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWD 337
Query: 468 LKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
+ T +VD+ ++ G + A + + ++ W ALL G HG
Sbjct: 338 IHIGTAIVDMYAKCGCIEMALKIFYSMSQR-NTFTWNALLCGLAMHG 383
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 104/428 (24%), Positives = 167/428 (39%), Gaps = 138/428 (32%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVT------------------------------ 31
YG CG A KVF M RD VSWNS+++
Sbjct: 150 YGACGDFSCAGKVFDEMLVRDVVSWNSLISGFMKAGHFDEAISVFFRMDVEPSMTTLVSV 209
Query: 32 --ACAANG-------------------LVL--EALE------CLERMSSLDNETP--NLV 60
ACA NG LVL L+ C ++ +E P ++V
Sbjct: 210 LAACARNGDLCTGKGIHGVIERRFKVNLVLGNAMLDMYVKNGCFYEAKNIFDELPTRDIV 269
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ +I G Q+ + ++++ + M+ G+ P+A L+SVL ACA L L G H YI
Sbjct: 270 SWTIMITGLVQSDHPKQSLELFSMMRTLGISPDAIILTSVLSACASLGTLDFGTWVHEYI 329
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G + + +VD+Y +CG + ALKIF S +N + N ++ G +G V EA
Sbjct: 330 NQRGIKWDIHIGTAIVDMYAKCGCIEMALKIFYSMSQRNTFTWNALLCGLAMHGLVHEAL 389
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LF+ M IIS G++P TF ++L A
Sbjct: 390 NLFEVM--------IIS----------------------------GVKPNEITFLAILTA 413
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C + +G++ FD + + NLL
Sbjct: 414 CCHCGLVDEGRK-----------------------------------YFDNMSKLYNLLP 438
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLT----PDIYTVGIILSACSSLATMERGKQVHA 356
K++ G +++ L E + L T PD+ G++L+AC+++ +E ++
Sbjct: 439 KLEHYGCMIDLFCRAG--LLEEAVELARTMPMKPDVLIWGLLLNACTTVGNIELSHRIQD 496
Query: 357 YAIRCGYD 364
Y + +D
Sbjct: 497 YILELDHD 504
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 142/320 (44%), Gaps = 42/320 (13%)
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
+L + D +LR ++IHA + GL D FV ++E + + + A D +E
Sbjct: 8 LLDSIKDCKNLRIFRQIHAQLVTSGLVYDDFVTSKVMEFFANFVEY--GDYACDYLEQGN 65
Query: 297 NLLGKMK----EDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGK 352
LG +G+ + A+ ++ M+ PD++T ++L ACS+ + G+
Sbjct: 66 TRLGSFPFNSLINGYVGGEFPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSGSREGR 125
Query: 353 QVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHG 412
QVH ++ G +D ++ +L+ Y CG A + + D+VS N++++ + G
Sbjct: 126 QVHGVVVKLGLLADHYVQNSLIRCYGACGDFSCAGKVFDEMLVRDVVSWNSLISGFMKAG 185
Query: 413 HGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSE------------------ 454
H E I+ F R+ P + +S L+AC G + TG
Sbjct: 186 HFDEAISVFFRM---DVEPSMTTLVSVLAACARNGDLCTGKGIHGVIERRFKVNLVLGNA 242
Query: 455 ----------FFDLMAYYDVKPS--LKHYTCMVDLLSRAGELGEAYEF---IKKIPMAPD 499
F++ +D P+ + +T M+ L ++ ++ E ++ + ++PD
Sbjct: 243 MLDMYVKNGCFYEAKNIFDELPTRDIVSWTIMITGLVQSDHPKQSLELFSMMRTLGISPD 302
Query: 500 SVMWGALLGGCVSHGNLEFG 519
+++ ++L C S G L+FG
Sbjct: 303 AIILTSVLSACASLGTLDFG 322
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 61/155 (39%), Gaps = 38/155 (24%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLE------------- 47
MY KCG ++ A K+F M +R+ +WN+++ A +GLV EAL E
Sbjct: 347 MYAKCGCIEMALKIFYSMSQRNTFTWNALLCGLAMHGLVHEALNLFEVMIISGVKPNEIT 406
Query: 48 ----------------------RMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRM 85
MS L N P L + +I F + G EEA+ + M
Sbjct: 407 FLAILTACCHCGLVDEGRKYFDNMSKLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTM 466
Query: 86 QAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
++P+ +L AC + + L YI
Sbjct: 467 P---MKPDVLIWGLLLNACTTVGNIELSHRIQDYI 498
>gi|62733531|gb|AAX95648.1| Tetratricopeptide repeat, putative [Oryza sativa Japonica Group]
Length = 888
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 204/612 (33%), Positives = 320/612 (52%), Gaps = 50/612 (8%)
Query: 4 KCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWS 63
K G + A+++F MPER VS+ ++V A G V +A+E L R L ++ ++
Sbjct: 160 KAGDIVSARRLFDGMPERSVVSYTTMVDALMKRGSVRDAVE-LYRQCPL----CSVPFFT 214
Query: 64 AVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRN 123
A+I GF N ++A+G+ M + G+ PN TL SV+ AC + L G ++
Sbjct: 215 AMIAGFVLNELPKDALGVFHEMLSCGVSPNEITLVSVIKACIGAGEFDLAMSIVGLAMKS 274
Query: 124 GFM-SNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAREL 182
+ N V N L+ +Y R GD +A ++F + +++ VS ++ Y E G++ AR +
Sbjct: 275 NLLDKNLGVRNSLITLYLRKGDADAARRMFDEMEVRDVVSWTALLDVYAELGDLEGARRV 334
Query: 183 FDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACA 242
D+M +R +SW ++++ + EA S++ +L DG P F SVL ACA
Sbjct: 335 LDEMP----ERNEVSWGTLVARHEQKGNAKEAVSLYSQMLA-DGCRPNISCFSSVLGACA 389
Query: 243 DMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI--ENI----- 295
+ LR G++IH + + ++ FV AL++MYC+ + L AQM F + +NI
Sbjct: 390 SLQDLRSGRKIHNQTLKMACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLPQKNIVCWNS 449
Query: 296 --------------ENLLGKMKEDGFEPNVYTWN--------------AMQLFSEMLSLD 327
E L KM NV +WN A++ F ML+
Sbjct: 450 LISGYSNNSKMVEAEELFKKMPAR----NVASWNSIISGYAQNRQFIDALKSFHAMLASG 505
Query: 328 LTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHAR 387
+P T +L AC+SL ++E GK VHA I+ G + +GTAL DMYAK G L ++
Sbjct: 506 QSPGEITFSSVLLACASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAKSGDLDSSK 565
Query: 388 LAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAG 447
+ + + V+ AM+ A +G +E I F ++++G P+ +FL+ L AC H+G
Sbjct: 566 RVFYEMPKRNDVAWTAMIQGLAENGFAEESILLFEDMISAGITPNEQTFLAILFACSHSG 625
Query: 448 SIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALL 507
++ +F++M + P KHYTCMVD+L+RAG L EA + + KI ++ W ALL
Sbjct: 626 LVEHAMHYFEMMQACGISPKAKHYTCMVDVLARAGHLAEAEDLLLKIESKSEANSWAALL 685
Query: 508 GGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHK 567
C + N E G+ AA RL EL+ +NT YV+L+N++A G+W D A R MK + K
Sbjct: 686 SACNIYRNKEMGERAAKRLQELDKDNTAGYVLLSNMYASCGKWKDAAEMRILMKGINLKK 745
Query: 568 SPGCSWIEDRDE 579
GCSW++ RDE
Sbjct: 746 DGGCSWVQIRDE 757
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 131/425 (30%), Positives = 197/425 (46%), Gaps = 42/425 (9%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y + G L+ A++V MPER+ VSW ++V G EA+ +M + D PN+
Sbjct: 321 VYAELGDLEGARRVLDEMPERNEVSWGTLVARHEQKGNAKEAVSLYSQMLA-DGCRPNIS 379
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+S+V+G ACA LQ L G++ H
Sbjct: 380 CFSSVLG-----------------------------------ACASLQDLRSGRKIHNQT 404
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ +N FV + L+D+Y +C + A IF KN V N++I GY N + EA
Sbjct: 405 LKMACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLPQKNIVCWNSLISGYSNNSKMVEAE 464
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
ELF +M R + SWNS+ISGY N + +A F +L G P TF SVL+A
Sbjct: 465 ELFKKMP----ARNVASWNSIISGYAQNRQFIDALKSFHAMLA-SGQSPGEITFSSVLLA 519
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA + SL GK +HA I LG++ FVG AL +MY + DL +++ F E+ ++
Sbjct: 520 CASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAKSGDLDSSKRVFYEMPKRNDVAW 579
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G N + ++ LF +M+S +TP+ T IL ACS +E
Sbjct: 580 TAMIQGLAENGFAEESILLFEDMISAGITPNEQTFLAILFACSHSGLVEHAMHYFEMMQA 639
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHAR-LAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
CG T +VD+ A+ G L A L K S + S A+L+A ++ + + G
Sbjct: 640 CGISPKAKHYTCMVDVLARAGHLAEAEDLLLKIESKSEANSWAALLSACNIYRNKEMGER 699
Query: 420 HFRRI 424
+R+
Sbjct: 700 AAKRL 704
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 119/484 (24%), Positives = 215/484 (44%), Gaps = 74/484 (15%)
Query: 127 SNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQM 186
++PF + +V + + GD++SA ++F ++ VS T++ + G+V +A EL+ Q
Sbjct: 146 ASPFAYDFMVREHVKAGDIVSARRLFDGMPERSVVSYTTMVDALMKRGSVRDAVELYRQC 205
Query: 187 EHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNS 246
V + +MI+G+V N L +A +F ++L G+ P T SV+ AC
Sbjct: 206 PLCSVP----FFTAMIAGFVLNELPKDALGVFHEML-SCGVSPNEITLVSVIKACIGAGE 260
Query: 247 LRKGKEIHALAIALGLQSDTF-VGGALVEMYCRYQDLVAAQMAFDEIE-----------N 294
I LA+ L V +L+ +Y R D AA+ FDE+E +
Sbjct: 261 FDLAMSIVGLAMKSNLLDKNLGVRNSLITLYLRKGDADAARRMFDEMEVRDVVSWTALLD 320
Query: 295 IENLLGKMK------EDGFEPNVYTW--------------NAMQLFSEMLSLDLTPDIYT 334
+ LG ++ ++ E N +W A+ L+S+ML+ P+I
Sbjct: 321 VYAELGDLEGARRVLDEMPERNEVSWGTLVARHEQKGNAKEAVSLYSQMLADGCRPNISC 380
Query: 335 VGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLA----- 389
+L AC+SL + G+++H ++ ++V + +AL+DMY KC L A++
Sbjct: 381 FSSVLGACASLQDLRSGRKIHNQTLKMACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLP 440
Query: 390 --------------------------YKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRR 423
+K++ ++ S N++++ YA + + + F
Sbjct: 441 QKNIVCWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSIISGYAQNRQFIDALKSFHA 500
Query: 424 ILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGE 483
+LASG P I+F S L AC S++ G + +K S+ T + D+ +++G+
Sbjct: 501 MLASGQSPGEITFSSVLLACASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAKSGD 560
Query: 484 LGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIE--LEPNNTGNYVMLA 541
L + ++P D V W A++ G +G E + + +I + PN LA
Sbjct: 561 LDSSKRVFYEMPKRND-VAWTAMIQGLAENGFAEESILLFEDMISAGITPNEQ---TFLA 616
Query: 542 NLFA 545
LFA
Sbjct: 617 ILFA 620
>gi|297819542|ref|XP_002877654.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
gi|297323492|gb|EFH53913.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
Length = 1112
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 180/563 (31%), Positives = 307/563 (54%), Gaps = 43/563 (7%)
Query: 42 ALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVL 101
A + ++MS L N+V+W+ +I Q G+ EAI M G E + TLSSV
Sbjct: 222 AYKVFDKMSEL-----NVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVF 276
Query: 102 PACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEV 161
ACA L+ LSLG++ H + R+G + V LVD+Y +C
Sbjct: 277 SACAELENLSLGRQLHSWAIRSGLADD--VECSLVDMYAKCS------------------ 316
Query: 162 SCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDN-SLYDEAFSMFRD 220
+G+V + R++FD+M+ ++SW ++I+GY+ N +L EA ++F +
Sbjct: 317 ----------ADGSVDDCRKVFDRMQ----DHSVMSWTALITGYMQNCNLATEAINLFSE 362
Query: 221 LLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQ 280
++ + +EP FTF S AC +++ R GK++ A GL S++ V +++ M+ +
Sbjct: 363 MITQGHVEPNHFTFSSAFKACGNVSDPRVGKQVLGHAFKRGLASNSSVSNSVISMFVKCD 422
Query: 281 DLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILS 340
+ A+ AF+ + + DG N+ +A +L SE+ +L +T +LS
Sbjct: 423 RMEDARTAFESLSEKNLVSYNTFLDGTCRNLDFEHAFELLSEIAERELGVSAFTFASLLS 482
Query: 341 ACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVS 400
+++ ++ +G+Q+H+ ++ G + + AL+ MY+KCGS+ A + + +++S
Sbjct: 483 GVANVGSLRKGEQIHSQVLKLGLSCNQPVCNALISMYSKCGSIDTASRVFSLMDNRNVIS 542
Query: 401 QNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA 460
+M+T +A HG + + F ++ G +P+ +++++ LSAC H G + G F+ M
Sbjct: 543 WTSMITGFAKHGFAERVLETFNQMTKEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSM- 601
Query: 461 YYD--VKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEF 518
Y D +KP ++HY CMVDLL RAG L +A+EFI +P D ++W LG C H N E
Sbjct: 602 YEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTEL 661
Query: 519 GQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRD 578
G++AA +++E +PN Y+ L+N++A AG+W + R+KMK+R + K GCSWIE D
Sbjct: 662 GKLAARKILEFDPNEPAAYIQLSNIYASAGKWEESTEMRRKMKERNLVKEGGCSWIEVGD 721
Query: 579 EIHKFRASDRSHDRSEEIYTIID 601
++HKF D SH + +IY +D
Sbjct: 722 KVHKFYVGDTSHPNAHQIYDELD 744
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 101/398 (25%), Positives = 183/398 (45%), Gaps = 69/398 (17%)
Query: 78 AIGMLFRMQAEGLEP-NARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLV 136
A+ L M +G+ P ++ T SS+L +C R + LGK H + + + N L+
Sbjct: 45 AVSALDLMARDGIRPMDSVTFSSLLKSCIRARHFRLGKLVHARLIEFEIEPDSVLYNSLI 104
Query: 137 DVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGII 196
+Y + GD+ +A+++F+ M G +R ++
Sbjct: 105 SLYSKSGDL-------------------------------TKAKDVFETMGRFG-KRDVV 132
Query: 197 SWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHAL 256
SW++M++ + +N +A +F + L G+ P + + +V+ AC++ + + G+ I
Sbjct: 133 SWSAMMACFGNNGREFDAIKLFVEFL-EMGLVPNDYCYTAVIRACSNSDFVGVGRVILGF 191
Query: 257 AIALG-LQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWN 315
+ G +SD VG +L++M+ + + + EN + KM E NV TW
Sbjct: 192 LMKTGHFESDVCVGCSLIDMFVKGE---------NSFENAYKVFDKMS----ELNVVTWT 238
Query: 316 --------------AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRC 361
A++ F +M+ D +T+ + SAC+ L + G+Q+H++AIR
Sbjct: 239 LMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGRQLHSWAIRS 298
Query: 362 GYDSDVHIGTALVDMYAKC---GSLKHARLAYKRISTPDLVSQNAMLTAYAMHGH-GKEG 417
G DV +LVDMYAKC GS+ R + R+ ++S A++T Y + + E
Sbjct: 299 GLADDVE--CSLVDMYAKCSADGSVDDCRKVFDRMQDHSVMSWTALITGYMQNCNLATEA 356
Query: 418 IAHFRRILASG-FRPDHISFLSALSACVHAGSIKTGSE 454
I F ++ G P+H +F SA AC + + G +
Sbjct: 357 INLFSEMITQGHVEPNHFTFSSAFKACGNVSDPRVGKQ 394
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 163/349 (46%), Gaps = 14/349 (4%)
Query: 220 DLLMRDGIEPT-SFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCR 278
DL+ RDGI P S TF S+L +C R GK +HA I ++ D+ + +L+ +Y +
Sbjct: 50 DLMARDGIRPMDSVTFSSLLKSCIRARHFRLGKLVHARLIEFEIEPDSVLYNSLISLYSK 109
Query: 279 YQDLVAAQMAFDEI-----ENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIY 333
DL A+ F+ + ++ + M F N ++A++LF E L + L P+ Y
Sbjct: 110 SGDLTKAKDVFETMGRFGKRDVVSWSAMMA--CFGNNGREFDAIKLFVEFLEMGLVPNDY 167
Query: 334 TVGIILSACSSLATMERGKQVHAYAIRCG-YDSDVHIGTALVDMYAKC-GSLKHARLAYK 391
++ ACS+ + G+ + + ++ G ++SDV +G +L+DM+ K S ++A +
Sbjct: 168 CYTAVIRACSNSDFVGVGRVILGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFD 227
Query: 392 RISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKT 451
++S ++V+ M+T G +E I F ++ SGF D + S SAC ++
Sbjct: 228 KMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSL 287
Query: 452 GSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPD-SVM-WGALLGG 509
G + + ++ +VD+ ++ G + K D SVM W AL+ G
Sbjct: 288 GRQLHSWAIRSGLADDVE--CSLVDMYAKCSADGSVDDCRKVFDRMQDHSVMSWTALITG 345
Query: 510 CVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQ 558
+ + NL I + + + N+ ++ F G SD +Q
Sbjct: 346 YMQNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNVSDPRVGKQ 394
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGS+D A +VF +M R+ +SW S++T A +G LE +M+ + PN V
Sbjct: 518 MYSKCGSIDTASRVFSLMDNRNVISWTSMITGFAKHGFAERVLETFNQMTK-EGVKPNEV 576
Query: 61 SWSAVIGGFTQNGYDEE 77
++ A++ + G E
Sbjct: 577 TYVAILSACSHVGLVSE 593
>gi|222625627|gb|EEE59759.1| hypothetical protein OsJ_12247 [Oryza sativa Japonica Group]
Length = 950
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 204/612 (33%), Positives = 320/612 (52%), Gaps = 50/612 (8%)
Query: 4 KCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWS 63
K G + A+++F MPER VS+ ++V A G V +A+E L R L ++ ++
Sbjct: 160 KAGDIVSARRLFDGMPERSVVSYTTMVDALMKRGSVRDAVE-LYRQCPL----CSVPFFT 214
Query: 64 AVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRN 123
A+I GF N ++A+G+ M + G+ PN TL SV+ AC + L G ++
Sbjct: 215 AMIAGFVLNELPKDALGVFHEMLSCGVSPNEITLVSVIKACIGAGEFDLAMSIVGLAMKS 274
Query: 124 GFM-SNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAREL 182
+ N V N L+ +Y R GD +A ++F + +++ VS ++ Y E G++ AR +
Sbjct: 275 NLLDKNLGVRNSLITLYLRKGDADAARRMFDEMEVRDVVSWTALLDVYAELGDLEGARRV 334
Query: 183 FDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACA 242
D+M +R +SW ++++ + EA S++ +L DG P F SVL ACA
Sbjct: 335 LDEMP----ERNEVSWGTLVARHEQKGNAKEAVSLYSQML-ADGCRPNISCFSSVLGACA 389
Query: 243 DMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI--ENI----- 295
+ LR G++IH + + ++ FV AL++MYC+ + L AQM F + +NI
Sbjct: 390 SLQDLRSGRKIHNQTLKMACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLPQKNIVCWNS 449
Query: 296 --------------ENLLGKMKEDGFEPNVYTWN--------------AMQLFSEMLSLD 327
E L KM NV +WN A++ F ML+
Sbjct: 450 LISGYSNNSKMVEAEELFKKMPAR----NVASWNSIISGYAQNRQFIDALKSFHAMLASG 505
Query: 328 LTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHAR 387
+P T +L AC+SL ++E GK VHA I+ G + +GTAL DMYAK G L ++
Sbjct: 506 QSPGEITFSSVLLACASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAKSGDLDSSK 565
Query: 388 LAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAG 447
+ + + V+ AM+ A +G +E I F ++++G P+ +FL+ L AC H+G
Sbjct: 566 RVFYEMPKRNDVAWTAMIQGLAENGFAEESILLFEDMISAGITPNEQTFLAILFACSHSG 625
Query: 448 SIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALL 507
++ +F++M + P KHYTCMVD+L+RAG L EA + + KI ++ W ALL
Sbjct: 626 LVEHAMHYFEMMQACGISPKAKHYTCMVDVLARAGHLAEAEDLLLKIESKSEANSWAALL 685
Query: 508 GGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHK 567
C + N E G+ AA RL EL+ +NT YV+L+N++A G+W D A R MK + K
Sbjct: 686 SACNIYRNKEMGERAAKRLQELDKDNTAGYVLLSNMYASCGKWKDAAEMRILMKGINLKK 745
Query: 568 SPGCSWIEDRDE 579
GCSW++ RDE
Sbjct: 746 DGGCSWVQIRDE 757
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 131/425 (30%), Positives = 197/425 (46%), Gaps = 42/425 (9%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y + G L+ A++V MPER+ VSW ++V G EA+ +M + D PN+
Sbjct: 321 VYAELGDLEGARRVLDEMPERNEVSWGTLVARHEQKGNAKEAVSLYSQMLA-DGCRPNIS 379
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+S+V+G ACA LQ L G++ H
Sbjct: 380 CFSSVLG-----------------------------------ACASLQDLRSGRKIHNQT 404
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ +N FV + L+D+Y +C + A IF KN V N++I GY N + EA
Sbjct: 405 LKMACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLPQKNIVCWNSLISGYSNNSKMVEAE 464
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
ELF +M R + SWNS+ISGY N + +A F +L G P TF SVL+A
Sbjct: 465 ELFKKMP----ARNVASWNSIISGYAQNRQFIDALKSFHAML-ASGQSPGEITFSSVLLA 519
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA + SL GK +HA I LG++ FVG AL +MY + DL +++ F E+ ++
Sbjct: 520 CASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAKSGDLDSSKRVFYEMPKRNDVAW 579
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G N + ++ LF +M+S +TP+ T IL ACS +E
Sbjct: 580 TAMIQGLAENGFAEESILLFEDMISAGITPNEQTFLAILFACSHSGLVEHAMHYFEMMQA 639
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHAR-LAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
CG T +VD+ A+ G L A L K S + S A+L+A ++ + + G
Sbjct: 640 CGISPKAKHYTCMVDVLARAGHLAEAEDLLLKIESKSEANSWAALLSACNIYRNKEMGER 699
Query: 420 HFRRI 424
+R+
Sbjct: 700 AAKRL 704
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 119/484 (24%), Positives = 215/484 (44%), Gaps = 74/484 (15%)
Query: 127 SNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQM 186
++PF + +V + + GD++SA ++F ++ VS T++ + G+V +A EL+ Q
Sbjct: 146 ASPFAYDFMVREHVKAGDIVSARRLFDGMPERSVVSYTTMVDALMKRGSVRDAVELYRQC 205
Query: 187 EHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNS 246
V + +MI+G+V N L +A +F ++L G+ P T SV+ AC
Sbjct: 206 PLCSVPF----FTAMIAGFVLNELPKDALGVFHEML-SCGVSPNEITLVSVIKACIGAGE 260
Query: 247 LRKGKEIHALAIALGLQSDTF-VGGALVEMYCRYQDLVAAQMAFDEIE-----------N 294
I LA+ L V +L+ +Y R D AA+ FDE+E +
Sbjct: 261 FDLAMSIVGLAMKSNLLDKNLGVRNSLITLYLRKGDADAARRMFDEMEVRDVVSWTALLD 320
Query: 295 IENLLGKMK------EDGFEPNVYTW--------------NAMQLFSEMLSLDLTPDIYT 334
+ LG ++ ++ E N +W A+ L+S+ML+ P+I
Sbjct: 321 VYAELGDLEGARRVLDEMPERNEVSWGTLVARHEQKGNAKEAVSLYSQMLADGCRPNISC 380
Query: 335 VGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLA----- 389
+L AC+SL + G+++H ++ ++V + +AL+DMY KC L A++
Sbjct: 381 FSSVLGACASLQDLRSGRKIHNQTLKMACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLP 440
Query: 390 --------------------------YKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRR 423
+K++ ++ S N++++ YA + + + F
Sbjct: 441 QKNIVCWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSIISGYAQNRQFIDALKSFHA 500
Query: 424 ILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGE 483
+LASG P I+F S L AC S++ G + +K S+ T + D+ +++G+
Sbjct: 501 MLASGQSPGEITFSSVLLACASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAKSGD 560
Query: 484 LGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIE--LEPNNTGNYVMLA 541
L + ++P D V W A++ G +G E + + +I + PN LA
Sbjct: 561 LDSSKRVFYEMPKRND-VAWTAMIQGLAENGFAEESILLFEDMISAGITPNEQ---TFLA 616
Query: 542 NLFA 545
LFA
Sbjct: 617 ILFA 620
>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
Length = 948
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 184/601 (30%), Positives = 327/601 (54%), Gaps = 74/601 (12%)
Query: 16 KMMPERDCVSWNSVVTA-CAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGY 74
K+ ++D + N +++ C NGL+ + ++M D VSW+ +I G++Q G
Sbjct: 303 KIGIKKDVIVNNGLLSMYCKFNGLI-DGRRIFDKMVLRDA-----VSWNTMICGYSQVGL 356
Query: 75 DEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNG 134
EE+I + M + +P+ T++S+L AC L L GK H Y+ +G+ + N
Sbjct: 357 YEESIKLFMEMVNQ-FKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNI 415
Query: 135 LVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRG 194
L+++Y +CG++L++ +E+F M+ +
Sbjct: 416 LINMYAKCGNLLAS-------------------------------QEVFSGMK----CKD 440
Query: 195 IISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIH 254
+SWNSMI+ Y+ N +DEA +F+ +M+ ++P S T+ +L + L GKE+H
Sbjct: 441 SVSWNSMINVYIQNGSFDEAMKLFK--MMKTDVKPDSVTYVMLLSMSTQLGDLXLGKELH 498
Query: 255 ALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTW 314
+G S+ V LV+MY + +M D ++ EN+ + ++ TW
Sbjct: 499 CDLAKMGFNSNIVVSNTLVDMYAK-----CGEMG-DSLKVFENMKAR--------DIITW 544
Query: 315 NA--------------MQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
N +++ S M + +TPD+ T+ IL CS LA +GK++H +
Sbjct: 545 NTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFK 604
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
G +SDV +G L++MY+KCGSL+++ +K + T D+V+ A+++A M+G GK+ +
Sbjct: 605 LGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRA 664
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLS 479
F + A+G PDH++F++ + AC H+G ++ G +F M Y ++P ++HY C+VDLLS
Sbjct: 665 FGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLS 724
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
R+ L +A +FI +P+ PDS +WGALL C G+ E Q ++R+IEL P++TG YV+
Sbjct: 725 RSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAQRVSERIIELNPDDTGYYVL 784
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTI 599
++N++A G+W + R+ +K R + K PGCSW+E +++++ F + ++ EE+ +
Sbjct: 785 VSNVYAALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFSEQFEEVNKL 844
Query: 600 I 600
+
Sbjct: 845 L 845
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 132/478 (27%), Positives = 230/478 (48%), Gaps = 45/478 (9%)
Query: 52 LDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLS 111
L + + N+ W+++I T NG EA+ + Q L+P+ T SV+ ACA L
Sbjct: 132 LASPSNNVYXWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFE 191
Query: 112 LGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYC 171
+ K H + GF S+ ++ N L+D+Y C
Sbjct: 192 MAKSIHDRVLXMGFGSDLYIGNALIDMY-------------------------------C 220
Query: 172 ENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSM---FRDLLMRDGIE 228
++ +AR++F++M R ++SWNS+ISGY N ++EA + FR+L G+
Sbjct: 221 RFNDLDKARKVFEEMP----LRDVVSWNSLISGYNANGYWNEALEIYYRFRNL----GVV 272
Query: 229 PTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMA 288
P S+T SVL AC + S+ +G IH L +G++ D V L+ MYC++ L+ +
Sbjct: 273 PDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRI 332
Query: 289 FDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATM 348
FD++ + + G+ +++LF EM++ PD+ T+ IL AC L +
Sbjct: 333 FDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVN-QFKPDLLTITSILQACGHLGDL 391
Query: 349 ERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAY 408
E GK VH Y I GY+ D L++MYAKCG+L ++ + + D VS N+M+ Y
Sbjct: 392 EFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVY 451
Query: 409 AMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSL 468
+G E + F +++ + +PD ++++ LS G + G E +A ++
Sbjct: 452 IQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLSMSTQLGDLXLGKELHCDLAKMGFNSNI 510
Query: 469 KHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRL 526
+VD+ ++ GE+G++ + + + A D + W ++ CV + G R+
Sbjct: 511 VVSNTLVDMYAKCGEMGDSLKVFENMK-ARDIITWNTIIASCVHSEDCNLGLRMISRM 567
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 131/514 (25%), Positives = 231/514 (44%), Gaps = 75/514 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY + LD A+KVF+ MP RD +V
Sbjct: 218 MYCRFNDLDKARKVFEEMPLRD------------------------------------VV 241
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+++I G+ NGY EA+ + +R + G+ P++ T+SSVL AC L + G HG I
Sbjct: 242 SWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLI 301
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G + V NGL+ +Y + ++ +IF K +++ VS NT+I GY + G
Sbjct: 302 EKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVG------ 355
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LY+E+ +F + M + +P T S+L A
Sbjct: 356 -----------------------------LYEESIKLFME--MVNQFKPDLLTITSILQA 384
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C + L GK +H I G + DT L+ MY + +L+A+Q F ++ +++
Sbjct: 385 CGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSW 444
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
+ + N AM+LF +M+ D+ PD T ++LS + L + GK++H +
Sbjct: 445 NSMINVYIQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLSMSTQLGDLXLGKELHCDLAK 503
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
G++S++ + LVDMYAKCG + + ++ + D+++ N ++ + G+
Sbjct: 504 MGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRM 563
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSR 480
R+ G PD + LS L C + + G E + ++ + ++++ S+
Sbjct: 564 ISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSK 623
Query: 481 AGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
G L +++ + K+ D V W AL+ C +G
Sbjct: 624 CGSLRNSFQ-VFKLMKTKDVVTWTALISACGMYG 656
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 174/359 (48%), Gaps = 13/359 (3%)
Query: 195 IISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIH 254
+ WNS+I N L+ EA S++ + R ++P ++TF SV+ ACA + K IH
Sbjct: 139 VYXWNSIIRALTHNGLFSEALSLYSET-QRIRLQPDTYTFPSVINACAGLLDFEMAKSIH 197
Query: 255 ALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTW 314
+ +G SD ++G AL++MYCR+ DL A+ F+E+ + + G+ N Y
Sbjct: 198 DRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWN 257
Query: 315 NAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALV 374
A++++ +L + PD YT+ +L AC L ++E G +H + G DV + L+
Sbjct: 258 EALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLL 317
Query: 375 DMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHI 434
MY K L R + ++ D VS N M+ Y+ G +E I F + + F+PD +
Sbjct: 318 SMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFME-MVNQFKPDLL 376
Query: 435 SFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKI 494
+ S L AC H G ++ G D M + ++++ ++ G L + E +
Sbjct: 377 TITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGM 436
Query: 495 PMAPDSVMWGALLGGCVSHGNLE-----FGQIAADRLIELEPNNTGNYVMLANLFAYAG 548
DSV W +++ + +G+ + F + D ++P++ YVML ++ G
Sbjct: 437 K-CKDSVSWNSMINVYIQNGSFDEAMKLFKMMKTD----VKPDSV-TYVMLLSMSTQLG 489
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 153/364 (42%), Gaps = 63/364 (17%)
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
F S+ A A + + ++H+L I LGL L+ Y ++D ++ F +
Sbjct: 75 FSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVF-RLA 133
Query: 294 NIENLLGKMKEDGFEPNVYTWN--------------AMQLFSEMLSLDLTPDIYTVGIIL 339
+ N NVY WN A+ L+SE + L PD YT ++
Sbjct: 134 SPSN------------NVYXWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVI 181
Query: 340 SACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLV 399
+AC+ L E K +H + G+ SD++IG AL+DMY + L AR ++ + D+V
Sbjct: 182 NACAGLLDFEMAKSIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVV 241
Query: 400 SQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM 459
S N++++ Y +G+ E + + R G PD + S L AC GS++ G L+
Sbjct: 242 SWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLI 301
Query: 460 AYYDVKPSL-------------------------------KHYTCMVDLLSRAGELGEAY 488
+K + + M+ S+ G E+
Sbjct: 302 EKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESI 361
Query: 489 EFIKKI--PMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIE--LEPNNTGNYVMLANLF 544
+ ++ PD + ++L C G+LEFG+ D +I E + T + +++ N++
Sbjct: 362 KLFMEMVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILI-NMY 420
Query: 545 AYAG 548
A G
Sbjct: 421 AKCG 424
>gi|147812109|emb|CAN61522.1| hypothetical protein VITISV_010801 [Vitis vinifera]
Length = 674
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 193/604 (31%), Positives = 313/604 (51%), Gaps = 73/604 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KC +D K+F MP ++ VSWN+++
Sbjct: 117 VYVKCKEFNDVCKMFDEMPLKNVVSWNTLIC----------------------------- 147
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
V+ G + +M E + PN TL+ +L A L + + ++ H +I
Sbjct: 148 ---GVVEGNCKFALVRLGFHCFRQMVLEMMAPNCITLNGLLRASIELNDVGICRQLHCFI 204
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
++GF SN FV + LVD Y +KF G V EA+
Sbjct: 205 LKSGFDSNCFVGSALVDSY-------------AKF------------------GLVDEAQ 233
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMR-DGIEPTSFTFGSVLI 239
FD++ R ++ WN M+S Y N + +AF +F+ LMR +G++ FTF S++
Sbjct: 234 SAFDEVS----SRDLVLWNVMVSCYALNGVQGKAFGVFK--LMRLEGVKGDXFTFTSMIN 287
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
+C + S GK++H L I L D V ALV+MY + +++ A+ AFD + ++N++
Sbjct: 288 SCGVLGSCGLGKQVHGLIIRLSFDLDVLVASALVDMYSKNENIEDARKAFDGMJ-VKNIV 346
Query: 300 G-KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYA 358
G+ + M+L EM+ + PD + ILS+C +L+ QVHAY
Sbjct: 347 SWTTMXVGYGQHGDGKEXMRLLQEMIRVYTYPDELALASILSSCGNLSATSEVVQVHAYV 406
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGI 418
+ G+++ + I ALV Y+KCGS+ A ++ ++ PD++S +++ AYA HG K+G+
Sbjct: 407 VENGFEAFLSIANALVSAYSKCGSIGSAFQSFSSVAEPDIISWTSLMGAYAFHGLSKQGV 466
Query: 419 AHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDL 477
F +IL+S RPD ++FL LSAC H G + G +F+LM Y + P +HYT ++DL
Sbjct: 467 DVFEKILSSNVRPDKVAFLGVLSACAHGGFVLEGLHYFNLMINVYQIMPDSEHYTSIIDL 526
Query: 478 LSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNY 537
L RAG L EA + +P+ P S GA LG C + N+ + A+++L +EPN G Y
Sbjct: 527 LGRAGFLDEAVNLLTSMPVEPRSDTLGAFLGACKVYRNVGLARWASEKLFVMEPNEPGKY 586
Query: 538 VMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
+++N++A G W D+AR R+ M++R K PGCSW+E E+H F + D++H R+ ++Y
Sbjct: 587 SLMSNMYASVGHWFDVARVRKLMRERCDFKVPGCSWMETAGEVHTFVSRDKTHPRAVQVY 646
Query: 598 TIID 601
++D
Sbjct: 647 GMLD 650
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 110/424 (25%), Positives = 193/424 (45%), Gaps = 47/424 (11%)
Query: 98 SSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSI 157
S L A+L L GK+ H ++ + G + + N ++ VY +C + K+F + +
Sbjct: 77 SHALKISAKLGFLHGGKQLHAHVIKLGXCNLLSLQNQVLHVYVKCKEFNDVCKMFDEMPL 136
Query: 158 KNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDN----SLYDE 213
KN ++SWN++I G V+ +L
Sbjct: 137 KN-----------------------------------VVSWNTLICGVVEGNCKFALVRL 161
Query: 214 AFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALV 273
F FR +++ + + P T +L A ++N + +++H + G S+ FVG ALV
Sbjct: 162 GFHCFRQMVL-EMMAPNCITLNGLLRASIELNDVGICRQLHCFILKSGFDSNCFVGSALV 220
Query: 274 EMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIY 333
+ Y ++ + AQ AFDE+ + + +L + + N A +F M + D +
Sbjct: 221 DSYAKFGLVDEAQSAFDEVSSRDLVLWNVMVSCYALNGVQGKAFGVFKLMRLEGVKGDXF 280
Query: 334 TVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRI 393
T ++++C L + GKQVH IR +D DV + +ALVDMY+K +++ AR A+ +
Sbjct: 281 TFTSMINSCGVLGSCGLGKQVHGLIIRLSFDLDVLVASALVDMYSKNENIEDARKAFDGM 340
Query: 394 STPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGS 453
++VS M Y HG GKE + + ++ PD ++ S LS+C G++ S
Sbjct: 341 JVKNIVSWTTMXVGYGQHGDGKEXMRLLQEMIRVYTYPDELALASILSSC---GNLSATS 397
Query: 454 EFFDLMAYY---DVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGC 510
E + AY + L +V S+ G +G A++ + PD + W +L+G
Sbjct: 398 EVVQVHAYVVENGFEAFLSIANALVSAYSKCGSIGSAFQSFSSVA-EPDIISWTSLMGAY 456
Query: 511 VSHG 514
HG
Sbjct: 457 AFHG 460
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 138/309 (44%), Gaps = 34/309 (11%)
Query: 225 DGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVA 284
D SF+ ++ I+ A + L GK++HA I LG + + ++ +Y + ++
Sbjct: 68 DSCSTHSFSSHALKIS-AKLGFLHGGKQLHAHVIKLGXCNLLSLQNQVLHVYVKCKEFND 126
Query: 285 AQMAFDEIENIENLLGKMKEDGFEPNVYTWNAM------------------QLFSEMLSL 326
FDE+ NV +WN + F +M+
Sbjct: 127 VCKMFDEMP--------------LKNVVSWNTLICGVVEGNCKFALVRLGFHCFRQMVLE 172
Query: 327 DLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHA 386
+ P+ T+ +L A L + +Q+H + ++ G+DS+ +G+ALVD YAK G + A
Sbjct: 173 MMAPNCITLNGLLRASIELNDVGICRQLHCFILKSGFDSNCFVGSALVDSYAKFGLVDEA 232
Query: 387 RLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHA 446
+ A+ +S+ DLV N M++ YA++G + F+ + G + D +F S +++C
Sbjct: 233 QSAFDEVSSRDLVLWNVMVSCYALNGVQGKAFGVFKLMRLEGVKGDXFTFTSMINSCGVL 292
Query: 447 GSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGAL 506
GS G + L+ + + +VD+ S+ + +A + + + + V W +
Sbjct: 293 GSCGLGKQVHGLIIRLSFDLDVLVASALVDMYSKNENIEDARKAFDGM-JVKNIVSWTTM 351
Query: 507 LGGCVSHGN 515
G HG+
Sbjct: 352 XVGYGQHGD 360
>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
Length = 770
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 182/544 (33%), Positives = 309/544 (56%), Gaps = 40/544 (7%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
N+VSW++++ G+ QNG +E+A+ + +MQ EG++PN T ++VL A + G + H
Sbjct: 157 NVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVH 216
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
+ ++G S FV N +V++Y + + V+
Sbjct: 217 TMVIKSGLDSTIFVGNSMVNMYSK-------------------------------SLMVS 245
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
+A+ +FD ME+ R +SWNSMI+G+V N L EAF +F + + +G++ T F +V
Sbjct: 246 DAKAVFDSMEN----RNAVSWNSMIAGFVTNGLDLEAFELFYRMRL-EGVKLTQTIFATV 300
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
+ CA++ + K++H I G D + AL+ Y + ++ A F + ++N
Sbjct: 301 IKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQN 360
Query: 298 LLG-KMKEDGFEPNVYTWNAMQLFSEMLSLD-LTPDIYTVGIILSACSS-LATMERGKQV 354
++ G+ N T AM LF +M + + P+ +T +L+AC++ A++E+GKQ
Sbjct: 361 VVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVLNACAAPTASVEQGKQF 420
Query: 355 HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHG 414
H+ +I+ G+ + + + +ALV MYAK G+++ A +KR DLVS N+M++ YA HG G
Sbjct: 421 HSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCG 480
Query: 415 KEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTC 473
K+ + F + + D I+F+ +SAC HAG + G +FDLM Y + P+++HY+C
Sbjct: 481 KKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSC 540
Query: 474 MVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNN 533
MVDL SRAG L +A + I K+P + +W LL C H N++ G++AA++LI L+P +
Sbjct: 541 MVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQLGELAAEKLISLQPQD 600
Query: 534 TGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRS 593
+ YV+L+N++A AG W + A+ R+ M +++ K G SWIE +++ F A D SH +S
Sbjct: 601 SAAYVLLSNIYATAGNWQERAKVRKLMDMKKVKKEAGYSWIEVKNKTFSFMAGDLSHPQS 660
Query: 594 EEIY 597
+ IY
Sbjct: 661 DRIY 664
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 125/472 (26%), Positives = 214/472 (45%), Gaps = 50/472 (10%)
Query: 52 LDNETPN--LVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQK 109
L +ETP L + ++ F++N ++EA+ + ++ G + +LS VL C L
Sbjct: 48 LFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLFD 107
Query: 110 LSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVG 169
+GK+ H + GF+ + V LVD+Y + + ++F + +KN VS +++ G
Sbjct: 108 RIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAG 167
Query: 170 YCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEP 229
Y +NG +A +LF QM+ +GI+P
Sbjct: 168 YRQNGLNEQALKLFSQMQ------------------------------------LEGIKP 191
Query: 230 TSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAF 289
FTF +VL A ++ KG ++H + I GL S FVG ++V MY + + A+ F
Sbjct: 192 NPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVF 251
Query: 290 DEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEML--SLDLTPDIYTVGIILSACSSLAT 347
D +EN + GF N A +LF M + LT I+ ++ C+++
Sbjct: 252 DSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFAT--VIKLCANIKE 309
Query: 348 MERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHA-RLAYKRISTPDLVSQNAMLT 406
M KQ+H I+ G D D++I TAL+ Y+KC + A +L ++VS A+++
Sbjct: 310 MSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIIS 369
Query: 407 AYAMHGHGKEGIAHF---RRILASGFRPDHISFLSALSACVH-AGSIKTGSEFFDLMAYY 462
Y +G + F RR G P+ +F S L+AC S++ G +F
Sbjct: 370 GYVQNGRTDRAMNLFCQMRR--EEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKS 427
Query: 463 DVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
+L + +V + ++ G + A E K+ + D V W +++ G HG
Sbjct: 428 GFSNALCVSSALVTMYAKRGNIESANEVFKR-QVDRDLVSWNSMISGYAQHG 478
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 171/378 (45%), Gaps = 53/378 (14%)
Query: 27 NSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQ 86
NS+V + + +V +A + M E N VSW+++I GF NG D EA + +RM+
Sbjct: 232 NSMVNMYSKSLMVSDAKAVFDSM-----ENRNAVSWNSMIAGFVTNGLDLEAFELFYRMR 286
Query: 87 AEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDML 146
EG++ ++V+ CA ++++S K+ H + +NG + + L+ Y +C ++
Sbjct: 287 LEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEID 346
Query: 147 SALKIFSKF-SIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGY 205
A K+F ++N VS II GY +NG A LF QM
Sbjct: 347 DAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRR----------------- 389
Query: 206 VDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC-ADMNSLRKGKEIHALAIALGLQS 264
+G+EP FTF SVL AC A S+ +GK+ H+ +I G +
Sbjct: 390 ------------------EEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSN 431
Query: 265 DTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEML 324
V ALV MY + ++ +A F + + + G+ + ++++F EM
Sbjct: 432 ALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMR 491
Query: 325 SLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIG------TALVDMYA 378
S +L D T ++SAC+ + G++ ++ D HI + +VD+Y+
Sbjct: 492 SKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVK-----DYHIVPTMEHYSCMVDLYS 546
Query: 379 KCGSLKHARLAYKRISTP 396
+ G L+ A ++ P
Sbjct: 547 RAGMLEKAMDLINKMPFP 564
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 156/349 (44%), Gaps = 31/349 (8%)
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
+++LFD+ G+ R N ++ + N EA ++F L R G + VL
Sbjct: 45 SQQLFDETPQQGLSRN----NHLLFEFSRNDQNKEALNLFLGL-RRSGSPTDGSSLSCVL 99
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDE--IENIE 296
C + GK++H I G D VG +LV+MY + + + + FDE ++N+
Sbjct: 100 KVCGCLFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVV 159
Query: 297 NLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHA 356
+ + G+ N A++LFS+M + P+ +T +L ++ +E+G QVH
Sbjct: 160 SWTSLLA--GYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHT 217
Query: 357 YAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKE 416
I+ G DS + +G ++V+MY+K + A+ + + + VS N+M+ + +G E
Sbjct: 218 MVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLE 277
Query: 417 GIAHFRRILASGFRPDHISFLSALSAC-----------VHAGSIKTGSEFFDLMAYYDVK 465
F R+ G + F + + C +H IK GS+F
Sbjct: 278 AFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDF---------- 327
Query: 466 PSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
L T ++ S+ E+ +A++ + + V W A++ G V +G
Sbjct: 328 -DLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNG 375
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G+++ A +VFK +RD VSWNS+++ A +G ++L+ E M S + E +
Sbjct: 442 MYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDG-I 500
Query: 61 SWSAVIGGFTQNGYDEEA 78
++ VI T G E
Sbjct: 501 TFIGVISACTHAGLVNEG 518
>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Vitis vinifera]
Length = 735
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 182/558 (32%), Positives = 303/558 (54%), Gaps = 48/558 (8%)
Query: 55 ETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGK 114
+ N+ SW++VI ++G EA+ M+ L+PN T + +C+ L L G+
Sbjct: 113 DKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGR 172
Query: 115 EFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
+ H GF + FV + LVD+Y +CG++
Sbjct: 173 QAHQQALIFGFEPDLFVSSALVDMYSKCGEL----------------------------- 203
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDG-------- 226
+AR LFD++ H R I+SW SMI+GYV N A +F++ L+ +
Sbjct: 204 --RDARTLFDEISH----RNIVSWTSMITGYVQNDDAHRALLLFKEFLVEESGSEGDGEV 257
Query: 227 -IEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAA 285
++P + SVL AC+ ++ + +H I G + D V L++ Y + +L +
Sbjct: 258 CVDPIAMV--SVLSACSRVSEKSITEGVHGFLIKRGFEGDLGVENTLMDAYAKCGELGVS 315
Query: 286 QMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSL-DLTPDIYTVGIILSACSS 344
+ FD + + + + N + +M++F M+ ++ + T+ +L AC+
Sbjct: 316 RRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAH 375
Query: 345 LATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAM 404
+ GK +H I+ G +S+V +GT+++DMY KCG ++ AR A+ R+ ++ S +AM
Sbjct: 376 SGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAM 435
Query: 405 LTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YD 463
+ Y MHGH KE + F + +G +P++I+F+S L+AC HAG ++ G +F M++ +D
Sbjct: 436 VAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFD 495
Query: 464 VKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAA 523
V+P ++HY CMVDLL RAG L EA++ IK + + PD V+WGALLG C H N++ G+I+A
Sbjct: 496 VEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKNVDLGEISA 555
Query: 524 DRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKF 583
+L EL+P N G YV+L+N++A AGRW D+ R R MK+ + K PG S ++ + +H F
Sbjct: 556 RKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKPPGFSLVDIKGRVHVF 615
Query: 584 RASDRSHDRSEEIYTIID 601
DR H + E+IY ++
Sbjct: 616 LVGDREHPQHEKIYEYLE 633
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 119/419 (28%), Positives = 196/419 (46%), Gaps = 77/419 (18%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG L DA+ +F + R+ VSW S++T N AL + LV
Sbjct: 196 MYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRALLLFKEF---------LV 246
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
S G D E ++P A + SVL AC+R+ + S+ + HG++
Sbjct: 247 EESGSEG-------DGEVC----------VDPIA--MVSVLSACSRVSEKSITEGVHGFL 287
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ GF + V N L+D Y +CG++ + ++F + ++ +S N+II Y +NG E+
Sbjct: 288 IKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTESM 347
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
E+F +M V+ G I++N++ T +VL+A
Sbjct: 348 EIFHRM----VKDGEINYNAV-------------------------------TLSAVLLA 372
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI--ENIENL 298
CA S R GK IH I +GL+S+ FVG ++++MYC+ + A+ AFD + +N+++
Sbjct: 373 CAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSW 432
Query: 299 LGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG-----KQ 353
+ G+ + + A+++F EM + P+ T +L+ACS +E G
Sbjct: 433 SAMVA--GYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAM 490
Query: 354 VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNAMLTAYAMH 411
H + + G + H G +VD+ + G LK A K + PD V A+L A MH
Sbjct: 491 SHEFDVEPGVE---HYG-CMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMH 545
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/374 (25%), Positives = 177/374 (47%), Gaps = 18/374 (4%)
Query: 152 FSKFSIKNEVSCNTIIVG-YCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSL 210
FS FS + + ++ Y N N+ LF++ + + SWNS+I+ +
Sbjct: 79 FSGFSKRRSICAGAVLRRRYSNNPNLTT---LFNKYVD---KTNVFSWNSVIAELARSGD 132
Query: 211 YDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGG 270
EA F + + ++P TF + +C+ + L G++ H A+ G + D FV
Sbjct: 133 SVEALRAFSSM-RKLSLKPNRSTFPCAIKSCSALLDLHSGRQAHQQALIFGFEPDLFVSS 191
Query: 271 ALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEML------ 324
ALV+MY + +L A+ FDEI + + G+ N A+ LF E L
Sbjct: 192 ALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRALLLFKEFLVEESGS 251
Query: 325 --SLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGS 382
++ D + +LSACS ++ + VH + I+ G++ D+ + L+D YAKCG
Sbjct: 252 EGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRGFEGDLGVENTLMDAYAKCGE 311
Query: 383 LKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASG-FRPDHISFLSALS 441
L +R + ++ D++S N+++ YA +G E + F R++ G + ++ + L
Sbjct: 312 LGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLL 371
Query: 442 ACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSV 501
AC H+GS + G D + ++ ++ T ++D+ + G++ A + ++ +
Sbjct: 372 ACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRM-REKNVK 430
Query: 502 MWGALLGGCVSHGN 515
W A++ G HG+
Sbjct: 431 SWSAMVAGYGMHGH 444
>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
Length = 813
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 202/606 (33%), Positives = 306/606 (50%), Gaps = 68/606 (11%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC L DA +F MP RD LV
Sbjct: 169 MYVKCACLPDAAHIFATMPARD------------------------------------LV 192
Query: 61 SWSAVIGGFTQNGYDEEAIGMLF--RMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHG 118
+W+A++ G+ +G A+ L +MQ L PNA TL ++LP A+ L+ G H
Sbjct: 193 AWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHA 252
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
Y R N + L D G +L ++ Y + G++
Sbjct: 253 YCIRACLHPNRNSKSKLTD-----GVLLG----------------TALLDMYAKCGSLLY 291
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRD--GIEPTSFTFGS 236
AR +FD M R ++W+++I G+V S +AF +F+ +L + + PTS S
Sbjct: 292 ARRVFDAMP----ARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSI--AS 345
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
L ACA ++ LR G+++HAL G+ +D G +L+ MY + + A FDE+ +
Sbjct: 346 ALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKD 405
Query: 297 NLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHA 356
+ G+ N A +F +M + ++ PD T+ ++ ACS LA ++ G+ H
Sbjct: 406 TVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHG 465
Query: 357 YAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKE 416
I G S+ I AL+DMYAKCG + +R + + + D+VS N M+ Y +HG GKE
Sbjct: 466 SVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKE 525
Query: 417 GIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMV 475
A F + GF PD ++F+ LSAC H+G + G +F +M + Y + P ++HY CMV
Sbjct: 526 ATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMV 585
Query: 476 DLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTG 535
DLLSR G L EAYEFI+ +P+ D +W ALLG C + N++ G+ + + EL P TG
Sbjct: 586 DLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTG 645
Query: 536 NYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEE 595
N+V+L+N+++ AGR+ + A R K + KSPGCSWIE +H F D+SH +S E
Sbjct: 646 NFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPE 705
Query: 596 IYTIID 601
IY +D
Sbjct: 706 IYRELD 711
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 111/496 (22%), Positives = 208/496 (41%), Gaps = 59/496 (11%)
Query: 56 TPNLVSWSAVIGGFTQNGYDEEAIGMLF--RMQAEGLEPNARTLSSVLPACARLQKLSLG 113
+P++ +++ +I ++ + A G+ RM + PN T L AC+ L G
Sbjct: 85 SPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPFALKACSALADHHCG 144
Query: 114 KEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCEN 173
+ H + G ++ FV L+D+Y +C + A IF+ ++ V+ N ++ GY +
Sbjct: 145 RAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHH 204
Query: 174 GNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMR-DGIEPTSF 232
G +Y A + + M+ + P +
Sbjct: 205 G-----------------------------------MYHHAVAHLLSMQMQMHRLRPNAS 229
Query: 233 TFGSVLIACADMNSLRKGKEIHALAIALGLQSD----------TFVGGALVEMYCRYQDL 282
T ++L A +L +G +HA I L + +G AL++MY + L
Sbjct: 230 TLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSL 289
Query: 283 VAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLD---LTPDIYTVGIIL 339
+ A+ FD + + GF A LF ML+ L+P ++ L
Sbjct: 290 LYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPT--SIASAL 347
Query: 340 SACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLV 399
AC+SL + G+Q+HA + G +D+ G +L+ MYAK G + A + ++ D V
Sbjct: 348 RACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTV 407
Query: 400 SQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM 459
S +A+++ Y +G +E F+++ A PD + +S + AC H +++ G +
Sbjct: 408 SYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSV 467
Query: 460 AYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFG 519
+ ++D+ ++ G + + + +P + D V W ++ G HG G
Sbjct: 468 IIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMP-SRDIVSWNTMIAGYGIHG---LG 523
Query: 520 QIAADRLIELEPNNTG 535
+ A +E+ NN G
Sbjct: 524 KEATALFLEM--NNLG 537
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/362 (27%), Positives = 171/362 (47%), Gaps = 25/362 (6%)
Query: 173 NGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEA--FSMFRDLLMRDGIEPT 230
+G+++ A LFDQ+ V+ ++N +I Y +S A ++R +L R + P
Sbjct: 70 SGHLSRAHHLFDQIPSPDVR----TYNDLIRAYSSSSPTAAADGLHLYRRML-RHRVAPN 124
Query: 231 SFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFD 290
++TF L AC+ + G+ IH AI GLQ+D FV AL++MY + L A F
Sbjct: 125 NYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFA 184
Query: 291 EIENIENLLGKMKEDGFEPN-VYTWNAMQLFSEMLSLD-LTPDIYTVGIILSACSSLATM 348
+ + + G+ + +Y L S + + L P+ T+ +L + +
Sbjct: 185 TMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGAL 244
Query: 349 ERGKQVHAYAIRCGYDSD----------VHIGTALVDMYAKCGSLKHARLAYKRISTPDL 398
+G VHAY IR + V +GTAL+DMYAKCGSL +AR + + +
Sbjct: 245 AQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNE 304
Query: 399 VSQNAMLTAYAMHGHGKEGIAHFRRILASG---FRPDHISFLSALSACVHAGSIKTGSEF 455
V+ +A++ + + + F+ +LA G P I+ SAL AC ++ G +
Sbjct: 305 VTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIA--SALRACASLDHLRMGEQL 362
Query: 456 FDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
L+A V L ++ + ++AG + +A ++ + D+V + AL+ G V +G
Sbjct: 363 HALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVK-DTVSYSALVSGYVQNGR 421
Query: 516 LE 517
E
Sbjct: 422 AE 423
>gi|359478743|ref|XP_002282912.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Vitis vinifera]
Length = 642
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 189/579 (32%), Positives = 309/579 (53%), Gaps = 69/579 (11%)
Query: 52 LDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFR-MQAEGLEPNARTLSSVLPACARLQKL 110
+ PN SW+ I GF + EA+ + R +Q +G +P+ T + ACARL +
Sbjct: 64 FNTRNPNTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLI 123
Query: 111 SLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGY 170
+G E G++ GF S+ FV N ++ + CGD+ A K+F K SC
Sbjct: 124 RMGSEILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDK-------SC------- 169
Query: 171 CENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPT 230
R ++SWNSMI+GYV EA + +R++ + +GI+P
Sbjct: 170 ---------------------VRDLVSWNSMINGYVRRGWAYEALNFYREMKV-EGIKPD 207
Query: 231 SFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFD 290
T V+ +CA + L G+E H GL+ + AL++MY + +L +A+ FD
Sbjct: 208 EVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCGNLESARKLFD 267
Query: 291 EIEN-----------------IENLLGKMKEDGFEPNVYTWNAM--------------QL 319
+ N + ++ K+ ++ + +V WNAM L
Sbjct: 268 SMTNKTMVSWTTMVVGYAQSGLLDMAWKLFDEMPDKDVVPWNAMIGGYVHANRGKEALAL 327
Query: 320 FSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAK 379
F+EM ++++ PD T+ LSACS L ++ G +H Y + +V +GTAL+DMYAK
Sbjct: 328 FNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELSLNVALGTALIDMYAK 387
Query: 380 CGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSA 439
CG + A ++ + + ++ A+++ A+HG+ IA+F ++ + PD ++FL
Sbjct: 388 CGKITKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGL 447
Query: 440 LSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAP 498
LSAC H G ++ G ++F M+ +++ P LKHY+CMVDLL RAG L EA E IK +P+
Sbjct: 448 LSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEA 507
Query: 499 DSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQ 558
D+V+WGAL C HGN+ G+ AA +L++++P+++G YV+LAN++ A W + + R+
Sbjct: 508 DAVVWGALFFACRIHGNVLMGERAASKLLQMDPHDSGIYVLLANMYGEAEMWKEAGKARK 567
Query: 559 KMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
M+ R + K+PGCS IE +++F D+SH +SE+IY
Sbjct: 568 LMRQRGVEKTPGCSSIEVNGIVYEFIVRDKSHPQSEQIY 606
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 118/411 (28%), Positives = 192/411 (46%), Gaps = 43/411 (10%)
Query: 5 CGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSA 64
CG LD A+K+F RD VSWNS
Sbjct: 155 CGDLDGARKMFDKSCVRDLVSWNS------------------------------------ 178
Query: 65 VIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNG 124
+I G+ + G+ EA+ M+ EG++P+ T+ V+ +CA+L+ L LG+E H YI NG
Sbjct: 179 MINGYVRRGWAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENG 238
Query: 125 FMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFD 184
+ N L+D+Y +CG++ SA K+F + K VS T++VGY ++G + A +LFD
Sbjct: 239 LKLTVPLANALMDMYMKCGNLESARKLFDSMTNKTMVSWTTMVVGYAQSGLLDMAWKLFD 298
Query: 185 QMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADM 244
+M + ++ WN+MI GYV + EA ++F ++ + I P T S L AC+ +
Sbjct: 299 EMP----DKDVVPWNAMIGGYVHANRGKEALALFNEMQAMN-INPDEVTMVSCLSACSQL 353
Query: 245 NSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKE 304
+L G IH L + +G AL++MY + + A F E+ +L
Sbjct: 354 GALDVGIWIHHYIEKHELSLNVALGTALIDMYAKCGKITKAIQVFQELPGRNSLTWTAII 413
Query: 305 DGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHA-YAIRCGY 363
G + A+ FSEM+ + PD T +LSAC +E G++ + + +
Sbjct: 414 SGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQMSSKFNL 473
Query: 364 DSDVHIGTALVDMYAKCGSLKHARLAYKRIST-PDLVSQNAMLTAYAMHGH 413
+ + +VD+ + G L+ A K + D V A+ A +HG+
Sbjct: 474 SPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEADAVVWGALFFACRIHGN 524
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 133/272 (48%), Gaps = 8/272 (2%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG+L+ A+K+F M + VSW ++V A +GL+ A + + M D +V
Sbjct: 252 MYMKCGNLESARKLFDSMTNKTMVSWTTMVVGYAQSGLLDMAWKLFDEMPDKD-----VV 306
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
W+A+IGG+ +EA+ + MQA + P+ T+ S L AC++L L +G H YI
Sbjct: 307 PWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYI 366
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
++ N + L+D+Y +CG + A+++F + +N ++ II G +GN A
Sbjct: 367 EKHELSLNVALGTALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAI 426
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
F +M V +++ ++S L +E F + + + P + ++
Sbjct: 427 AYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDL 486
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGAL 272
L + +E L ++ +++D V GAL
Sbjct: 487 LGRAGLLEEAEE---LIKSMPIEADAVVWGAL 515
>gi|414887370|tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea mays]
Length = 802
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 198/620 (31%), Positives = 329/620 (53%), Gaps = 50/620 (8%)
Query: 24 VSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLF 83
VS S+V A AA + A+ + + +T V +AVI + + + A+ +
Sbjct: 89 VSATSLVAAYAAADRLPAAVSFFDAVPPARRDT---VLHNAVISAYARASHAAPAVAVFR 145
Query: 84 RMQAEG-LEPNARTLSSVLPACARLQKLSLGK--EFHGYITRNGFMSNPFVVNGLVDVYR 140
+ A G L P+ + +++L A L +S+ + H + ++G V N LV +Y
Sbjct: 146 SLLASGSLRPDDYSFTALLSAGGHLPNISVRHCAQLHCSVLKSGAGGALSVCNALVALYM 205
Query: 141 RCGD---MLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIIS 197
+C A K+ + K++++ T++VGY G+V AR +F++++ + +
Sbjct: 206 KCESPEATRDARKVLDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFEEVD----GKFDVV 261
Query: 198 WNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALA 257
WN+MISGYV + + EAF +FR +++ + + FTF SVL ACA++ GK +H
Sbjct: 262 WNAMISGYVHSGMAVEAFELFRRMVL-ERVPLDEFTFTSVLSACANVGLFAHGKSVHGQI 320
Query: 258 IALGL----QSDTFVGGALVEMYCRYQDLVAAQMAFD-----EIENIENLLGKMKEDG-- 306
I L ++ V ALV Y + ++ A+ FD ++ + +L E
Sbjct: 321 IRLQPNFVPEAALPVNNALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVESSCL 380
Query: 307 ------FEPNVY----TW--------------NAMQLFSEMLSLDLTPDIYTVGIILSAC 342
FE Y +W +A++LF++M S ++ P YT ++AC
Sbjct: 381 DKAVEVFEEMPYKNELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAAC 440
Query: 343 SSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQN 402
L ++ GKQ+H + ++ G++ G AL+ MYA+CG++K A L + + D VS N
Sbjct: 441 GELGALKHGKQLHGHIVQLGFEGSNSAGNALITMYARCGAVKEAHLMFLVMPNIDSVSWN 500
Query: 403 AMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY- 461
AM++A HGHG+E + F R++A G PD ISFL+ L+AC H+G + G +F+ M
Sbjct: 501 AMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFRYFESMKRD 560
Query: 462 YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQI 521
+ + P HYT ++DLL RAG +GEA + IK +P P +W A+L GC + G++E G
Sbjct: 561 FGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAH 620
Query: 522 AADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIH 581
AAD+L ++ P + G Y++L+N ++ AG W D AR R+ M+DR + K PGCSWIE +++H
Sbjct: 621 AADQLFKMTPQHDGTYILLSNTYSAAGCWVDAARVRKLMRDRGVKKEPGCSWIEAGNKVH 680
Query: 582 KFRASDRSHDRSEEIYTIID 601
F D H + E+Y ++
Sbjct: 681 VFLVGDTKHPEAHEVYKFLE 700
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 113/399 (28%), Positives = 195/399 (48%), Gaps = 26/399 (6%)
Query: 1 MYGKCGSLD---DAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETP 57
+Y KC S + DA+KV MP +D ++W ++V G V A E + +
Sbjct: 203 LYMKCESPEATRDARKVLDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFD--- 259
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
V W+A+I G+ +G EA + RM E + + T +SVL ACA + + GK H
Sbjct: 260 --VVWNAMISGYVHSGMAVEAFELFRRMVLERVPLDEFTFTSVLSACANVGLFAHGKSVH 317
Query: 118 GYITR--NGFMSNPF--VVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCEN 173
G I R F+ V N LV Y +CG++ A +IF ++K+ VS NTI+ GY E+
Sbjct: 318 GQIIRLQPNFVPEAALPVNNALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVES 377
Query: 174 GNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFT 233
+ +A E+F++M + + +SW M+SGYV ++A +F + + ++P +T
Sbjct: 378 SCLDKAVEVFEEMPY----KNELSWMVMVSGYVHGGFAEDALKLFNK-MRSENVKPCDYT 432
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
+ + AC ++ +L+ GK++H + LG + G AL+ MY R + A + F +
Sbjct: 433 YAGAIAACGELGALKHGKQLHGHIVQLGFEGSNSAGNALITMYARCGAVKEAHLMFLVMP 492
Query: 294 NIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG-- 351
NI+++ + + A++LF M++ + PD + +L+AC+ ++ G
Sbjct: 493 NIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFR 552
Query: 352 ---KQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHAR 387
+ I G D T L+D+ + G + AR
Sbjct: 553 YFESMKRDFGIIPGEDHY----TRLIDLLGRAGRIGEAR 587
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 104/471 (22%), Positives = 195/471 (41%), Gaps = 76/471 (16%)
Query: 128 NPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQME 187
+P + L+ +Y D+ +A +F + VS +++ Y + A FD +
Sbjct: 58 HPHLTLRLIHLYTLSRDLPAAATLFC--ADPCPVSATSLVAAYAAADRLPAAVSFFDAVP 115
Query: 188 HLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMN-- 245
+R + N++IS Y S A ++FR LL + P ++F ++L A +
Sbjct: 116 --PARRDTVLHNAVISAYARASHAAPAVAVFRSLLASGSLRPDDYSFTALLSAGGHLPNI 173
Query: 246 SLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVA---AQMAFDEIENIENL---- 298
S+R ++H + G V ALV +Y + + A A+ DE+ N ++L
Sbjct: 174 SVRHCAQLHCSVLKSGAGGALSVCNALVALYMKCESPEATRDARKVLDEMPNKDDLTWTT 233
Query: 299 --LGKMKED--GFEPNVY---------TWNAM--------------QLFSEMLSLDLTPD 331
+G ++ G +V+ WNAM +LF M+ + D
Sbjct: 234 MVVGYVRRGDVGAARSVFEEVDGKFDVVWNAMISGYVHSGMAVEAFELFRRMVLERVPLD 293
Query: 332 IYTVGIILSACSSLATMERGKQVHAYAIRCG----YDSDVHIGTALVDMYAKCGSLKHAR 387
+T +LSAC+++ GK VH IR ++ + + ALV Y+KCG++ AR
Sbjct: 294 EFTFTSVLSACANVGLFAHGKSVHGQIIRLQPNFVPEAALPVNNALVTFYSKCGNIAVAR 353
Query: 388 LAYKRISTPDLVSQNAMLTAYA------------------------------MH-GHGKE 416
+ ++ D+VS N +L+ Y +H G ++
Sbjct: 354 RIFDNMTLKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFAED 413
Query: 417 GIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVD 476
+ F ++ + +P ++ A++AC G++K G + + + S ++
Sbjct: 414 ALKLFNKMRSENVKPCDYTYAGAIAACGELGALKHGKQLHGHIVQLGFEGSNSAGNALIT 473
Query: 477 LLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLI 527
+ +R G + EA+ +P DSV W A++ HG+ DR++
Sbjct: 474 MYARCGAVKEAHLMFLVMPNI-DSVSWNAMISALGQHGHGREALELFDRMV 523
>gi|222626149|gb|EEE60281.1| hypothetical protein OsJ_13335 [Oryza sativa Japonica Group]
Length = 1135
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 194/643 (30%), Positives = 322/643 (50%), Gaps = 76/643 (11%)
Query: 22 DCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGM 81
+C N +V + G + +AL+ +RM N+V+W++V+ G+T+NG E A+ M
Sbjct: 51 ECKRLNRLVKS----GRLADALDLFDRMPR-----KNVVAWTSVMSGYTRNGRPEAALAM 101
Query: 82 LFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRR 141
M G+ PN ++ L ACA L L G++ H R GF + ++ + L+++Y R
Sbjct: 102 FADMVESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSR 161
Query: 142 CGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQM--------EH----- 188
CG + +A ++F + + V ++I +C NG A E QM EH
Sbjct: 162 CGSLPAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTI 221
Query: 189 -------LGVQ-------------RGIISWNSMISGYVDNSLYDEAFSMFRDL------- 221
LG Q + + S ++I Y N + A ++F L
Sbjct: 222 LTACPRVLGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVS 281
Query: 222 -----------------------LMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAI 258
++ +G++P F VL AC S+ G+++H AI
Sbjct: 282 WCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACG---SIGLGRQLHCSAI 338
Query: 259 ALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQ 318
L +D V AL+ MY R + + ++IEN + + N + A+
Sbjct: 339 KHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIA 398
Query: 319 LFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYA 378
L +M S TP+ Y +LS+C+ +A++++G Q H A++ G DS++ G AL++MY+
Sbjct: 399 LLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYS 458
Query: 379 KCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLS 438
KCG + ARLA+ + T D+ S N+++ +A HG + + F ++ ++G +PD +FL
Sbjct: 459 KCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLG 518
Query: 439 ALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMA 497
L C H+G ++ G FF LM Y P+ HY CM+D+L R G EA I +P
Sbjct: 519 VLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFE 578
Query: 498 PDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTR 557
PD+++W LL C H NL+ G++AADRL+EL ++ +YV+++N++A G W D + R
Sbjct: 579 PDALIWKTLLASCKLHRNLDIGKLAADRLMELSDRDSASYVLMSNIYAMHGEWEDARKVR 638
Query: 558 QKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTII 600
++M + + K GCSWIE +E+H F + D SH S+ IY ++
Sbjct: 639 RRMDETGVKKDAGCSWIEINNEVHTFASRDMSHPNSDSIYQML 681
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 126/294 (42%), Gaps = 43/294 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYG+ G +++ + + + D VSW + ++A NG +A+ L +M S
Sbjct: 355 MYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHS--------- 405
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
GFT NGY SSVL +CA + L G +FH
Sbjct: 406 ------EGFTPNGY---------------------AFSSVLSSCADVASLDQGMQFHCLA 438
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G S N L+++Y +CG M SA F + S N++I G+ ++G+ +A
Sbjct: 439 LKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKAL 498
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
E+F +M G++ ++ ++ G + + +E FR LM I+ SFT A
Sbjct: 499 EVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFR--LM---IDQYSFTPAPSHYA 553
Query: 241 CADMNSLRKGKEIHALAIA--LGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI 292
C R G+ AL + + + D + L+ +++L ++A D +
Sbjct: 554 CMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLASCKLHRNLDIGKLAADRL 607
>gi|86439692|emb|CAJ19324.1| selenium binding protein [Triticum aestivum]
Length = 624
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 178/515 (34%), Positives = 275/515 (53%), Gaps = 36/515 (6%)
Query: 85 MQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGD 144
+ A L P R S + ACA+ + L ++ H ++ + F + F+ N L+ +Y +C
Sbjct: 42 LDAGELAPTPRVYRSFITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCKCR- 100
Query: 145 MLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISG 204
+V +AR +FDQM ++ ++SW S+I+G
Sbjct: 101 ------------------------------SVLDARNVFDQMR----RKDMVSWTSLIAG 126
Query: 205 YVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQS 264
Y N + EA + +L + +P FTF S+L A G++IHALA+ G
Sbjct: 127 YAQNDMPVEAIGLLPGML-KGRFKPNGFTFASLLKAAGAYADSGTGRQIHALAVKCGWHE 185
Query: 265 DTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEML 324
D +VG AL++MY R + A FD++++ + GF +A+ F+EML
Sbjct: 186 DVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGESALMTFAEML 245
Query: 325 SLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLK 384
+T + S+ + L +E+GK VHA+ I+ +G L+DMYAK GS+
Sbjct: 246 RNGFEATHFTYSSVFSSIARLGALEQGKWVHAHVIKSRQKLTAFVGNTLLDMYAKSGSMI 305
Query: 385 HARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACV 444
AR + R+ DLV+ N+MLTA+A +G GKE ++HF + SG + I+FL L+AC
Sbjct: 306 DARKVFDRVDNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGVYLNQITFLCILTACS 365
Query: 445 HAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWG 504
H G +K G +F++M YD++P + HY +V LL RAG L A FI K+PM P + +WG
Sbjct: 366 HGGLVKEGKRYFEMMKEYDLEPEIDHYVTVVALLGRAGLLNYALVFIFKMPMEPTAAVWG 425
Query: 505 ALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRR 564
ALL C H N + GQ AAD + EL+P+++G V+L N++A G+W AR R MK
Sbjct: 426 ALLAACRMHKNAKVGQFAADHVFELDPDDSGPPVLLYNIYASTGQWDAAARVRMMMKTTG 485
Query: 565 MHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTI 599
+ K P CSW+E + +H F A+D +H ++EEIY +
Sbjct: 486 VKKEPACSWVEMENSVHMFVANDDTHPQAEEIYKM 520
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 151/300 (50%), Gaps = 3/300 (1%)
Query: 217 MFRDLLMRDGIE--PTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVE 274
+ RDL + D E PT + S + ACA +L ++IHA + D F+ +L+
Sbjct: 35 VLRDLDLLDAGELAPTPRVYRSFITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIH 94
Query: 275 MYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYT 334
MYC+ + ++ A+ FD++ + + G+ N A+ L ML P+ +T
Sbjct: 95 MYCKCRSVLDARNVFDQMRRKDMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFT 154
Query: 335 VGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS 394
+L A + A G+Q+HA A++CG+ DV++G+AL+DMYA+CG + A + ++
Sbjct: 155 FASLLKAAGAYADSGTGRQIHALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLD 214
Query: 395 TPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSE 454
+ + VS NA+++ +A G G+ + F +L +GF H ++ S S+ G+++ G
Sbjct: 215 SKNGVSWNALISGFARKGDGESALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKW 274
Query: 455 FFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
+ K + ++D+ +++G + +A + ++ D V W ++L +G
Sbjct: 275 VHAHVIKSRQKLTAFVGNTLLDMYAKSGSMIDARKVFDRVD-NKDLVTWNSMLTAFAQYG 333
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 107/416 (25%), Positives = 177/416 (42%), Gaps = 46/416 (11%)
Query: 7 SLDDAKKVFKMMPER----DCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSW 62
+L+DA+K+ + D NS++ VL+A ++M D +VSW
Sbjct: 66 NLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCKCRSVLDARNVFDQMRRKD-----MVSW 120
Query: 63 SAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITR 122
+++I G+ QN EAIG+L M +PN T +S+L A G++ H +
Sbjct: 121 TSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGTGRQIHALAVK 180
Query: 123 NGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAREL 182
G+ + +V + L+D+Y RCG M A +F K KN VS N +I G+ G+ A
Sbjct: 181 CGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGESALMT 240
Query: 183 FDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACA 242
F +M +R+G E T FT+ SV + A
Sbjct: 241 FAEM------------------------------------LRNGFEATHFTYSSVFSSIA 264
Query: 243 DMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKM 302
+ +L +GK +HA I + FVG L++MY + ++ A+ FD ++N + +
Sbjct: 265 RLGALEQGKWVHAHVIKSRQKLTAFVGNTLLDMYAKSGSMIDARKVFDRVDNKDLVTWNS 324
Query: 303 KEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCG 362
F A+ F EM + + T IL+ACS ++ GK+
Sbjct: 325 MLTAFAQYGLGKEAVSHFEEMRKSGVYLNQITFLCILTACSHGGLVKEGKRYFEMMKEYD 384
Query: 363 YDSDVHIGTALVDMYAKCGSLKHARL-AYKRISTPDLVSQNAMLTAYAMHGHGKEG 417
+ ++ +V + + G L +A + +K P A+L A MH + K G
Sbjct: 385 LEPEIDHYVTVVALLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMHKNAKVG 440
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 83/205 (40%), Gaps = 45/205 (21%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNS-------------------------------- 28
MY K GS+ DA+KVF + +D V+WNS
Sbjct: 297 MYAKSGSMIDARKVFDRVDNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGVYLNQIT 356
Query: 29 ---VVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRM 85
++TAC+ GLV E E M D E P + + V+ + G A+ +F+M
Sbjct: 357 FLCILTACSHGGLVKEGKRYFEMMKEYDLE-PEIDHYVTVVALLGRAGLLNYALVFIFKM 415
Query: 86 QAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITR-NGFMSNPFVVNGLVDVYRRCGD 144
+EP A ++L AC + +G+ ++ + S P V+ L ++Y G
Sbjct: 416 P---MEPTAAVWGALLAACRMHKNAKVGQFAADHVFELDPDDSGPPVL--LYNIYASTGQ 470
Query: 145 MLSALKI---FSKFSIKNEVSCNTI 166
+A ++ +K E +C+ +
Sbjct: 471 WDAAARVRMMMKTTGVKKEPACSWV 495
>gi|449527343|ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g24000, mitochondrial-like [Cucumis sativus]
Length = 677
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 176/521 (33%), Positives = 288/521 (55%), Gaps = 65/521 (12%)
Query: 90 LEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSAL 149
LEP S +L C L+KL G+ H +I + F + ++N ++++Y +CG +
Sbjct: 101 LEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSL---- 156
Query: 150 KIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNS 209
EA++LFD+M + ++SW +ISGY +
Sbjct: 157 ---------------------------EEAQDLFDKMP----TKDMVSWTVLISGYSQSG 185
Query: 210 LYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVG 269
EA ++F +L G +P FT S+L A S G+++HA ++ G + VG
Sbjct: 186 QASEALALFPKML-HLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVG 244
Query: 270 GALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNA------------- 316
+L++MY R+ + A++ F+ + NV +WNA
Sbjct: 245 SSLLDMYARWAHMREAKVIFNSLA--------------AKNVVSWNALIAGHARKGEGEH 290
Query: 317 -MQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVD 375
M+LF +ML P +T +L AC+S ++E+GK VHA+ I+ G +IG L+D
Sbjct: 291 VMRLFXQMLRQGFEPTHFTYSSVL-ACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLID 349
Query: 376 MYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHIS 435
MYAK GS+K A+ ++R+ D+VS N++++ YA HG G E + F ++L + +P+ I+
Sbjct: 350 MYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEIT 409
Query: 436 FLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIP 495
FLS L+AC H+G + G +F+LM + ++ + H+ +VDLL RAG L EA +FI+++P
Sbjct: 410 FLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMP 469
Query: 496 MAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLAR 555
+ P + +WGALLG C H N++ G AA+++ EL+P+++G +V+L+N++A AGR SD A+
Sbjct: 470 IKPTAAVWGALLGACRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAK 529
Query: 556 TRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEI 596
R+ MK+ + K P CSW+E +E+H F A+D SH EEI
Sbjct: 530 VRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEI 570
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 111/419 (26%), Positives = 175/419 (41%), Gaps = 74/419 (17%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGSL++A+ +F MP +D +V
Sbjct: 149 MYAKCGSLEEAQDLFDKMPTKD------------------------------------MV 172
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ +I G++Q+G EA+ + +M G +PN TLSS+L A G++ H +
Sbjct: 173 SWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFS 232
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G+ N V + L+D+Y R M A IF+ + KN VS N +I G+ G
Sbjct: 233 LKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVM 292
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LF QM +R G EPT FT+ SVL A
Sbjct: 293 RLFXQM------------------------------------LRQGFEPTHFTYSSVL-A 315
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA SL +GK +HA I G Q ++G L++MY + + A+ F + + +
Sbjct: 316 CASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSW 375
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G+ + A+QLF +ML + P+ T +L+ACS ++ G+ +
Sbjct: 376 NSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKK 435
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNAMLTAYAMHGHGKEGI 418
++ V +VD+ + G L A + + P A+L A MH + G+
Sbjct: 436 HKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGACRMHKNMDLGV 494
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 156/295 (52%), Gaps = 2/295 (0%)
Query: 220 DLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRY 279
DL+ +EP + +L C + L++G+ IHA + + D + ++ MY +
Sbjct: 94 DLINCGSLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKC 153
Query: 280 QDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIIL 339
L AQ FD++ + + + G+ + A+ LF +ML L P+ +T+ +L
Sbjct: 154 GSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLL 213
Query: 340 SACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLV 399
A + + G+Q+HA++++ GYD +VH+G++L+DMYA+ ++ A++ + ++ ++V
Sbjct: 214 KASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVV 273
Query: 400 SQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM 459
S NA++ +A G G+ + F ++L GF P H ++ S L AC +GS++ G +
Sbjct: 274 SWNALIAGHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVL-ACASSGSLEQGKWVHAHV 332
Query: 460 AYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
+P ++D+ +++G + +A + +++ + D V W +++ G HG
Sbjct: 333 IKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRL-VKQDIVSWNSIISGYAQHG 386
>gi|356522365|ref|XP_003529817.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Glycine max]
Length = 882
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 202/645 (31%), Positives = 332/645 (51%), Gaps = 81/645 (12%)
Query: 27 NSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQ 86
N++++ G +++A RM E NL SW+ ++GG+ + G +EA+ + RM
Sbjct: 145 NALLSMFVRFGNLVDAWYVFGRM-----EKRNLFSWNVLVGGYAKAGLFDEALDLYHRML 199
Query: 87 AEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDML 146
G++P+ T VL C + L G+E H ++ R GF S+ VVN L+ +Y +CGD+
Sbjct: 200 WVGVKPDVYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVKCGDVN 259
Query: 147 SALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMIS--- 203
+A +F K ++ +S N +I GY ENG E LF M V +++ S+I+
Sbjct: 260 TARLVFDKMPNRDRISWNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSVITACE 319
Query: 204 ------------GYV-------DNSLYDEAFSMF------------------RDL----- 221
GYV D S+++ M+ RDL
Sbjct: 320 LLGDDRLGRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEAETVFSRTECRDLVSWTA 379
Query: 222 --------------------LMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALG 261
+ +GI P T VL AC+ + +L G +H +A G
Sbjct: 380 MISGYENCLMPQKALETYKMMEAEGIMPDEITIAIVLSACSCLCNLDMGMNLHEVAKQKG 439
Query: 262 LQSDTFVGGALVEMYCRYQDLVAAQMAFDEI--ENIENLLGKMKEDGFEPNVYTWNAMQL 319
L S + V +L++MY + + + A F +NI + + G N + A+
Sbjct: 440 LVSYSIVANSLIDMYAKCKCIDKALEIFHSTLEKNIVSWTSIIL--GLRINNRCFEALFF 497
Query: 320 FSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAK 379
F EM+ L P+ T+ +LSAC+ + + GK++HA+A+R G D + A++DMY +
Sbjct: 498 FREMIR-RLKPNSVTLVCVLSACARIGALTCGKEIHAHALRTGVSFDGFMPNAILDMYVR 556
Query: 380 CGSLKHARLAYKRISTPD--LVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFL 437
CG +++ A+K+ + D + S N +LT YA G G F+R++ S P+ ++F+
Sbjct: 557 CGRMEY---AWKQFFSVDHEVTSWNILLTGYAERGKGAHATELFQRMVESNVSPNEVTFI 613
Query: 438 SALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPM 496
S L AC +G + G E+F+ M Y Y + P+LKHY C+VDLL R+G+L EAYEFI+K+PM
Sbjct: 614 SILCACSRSGMVAEGLEYFNSMKYKYSIMPNLKHYACVVDLLGRSGKLEEAYEFIQKMPM 673
Query: 497 APDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLART 556
PD +WGALL C H ++E G++AA+ + + + + G Y++L+NL+A G+W +A
Sbjct: 674 KPDPAVWGALLNSCRIHHHVELGELAAENIFQDDTTSVGYYILLSNLYADNGKWDKVAEV 733
Query: 557 RQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
R+ M+ + PGCSW+E + +H F +SD H + +EI +++
Sbjct: 734 RKMMRQNGLIVDPGCSWVEVKGTVHAFLSSDNFHPQIKEINALLE 778
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 109/399 (27%), Positives = 181/399 (45%), Gaps = 45/399 (11%)
Query: 21 RDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIG 80
RD NS++ ++ GL+ EA R E +LVSW+A+I G+ ++A+
Sbjct: 341 RDPSIHNSLIPMYSSVGLIEEAETVFSR-----TECRDLVSWTAMISGYENCLMPQKALE 395
Query: 81 MLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYR 140
M+AEG+ P+ T++ VL AC+ L L +G H + G +S V N L+D+Y
Sbjct: 396 TYKMMEAEGIMPDEITIAIVLSACSCLCNLDMGMNLHEVAKQKGLVSYSIVANSLIDMYA 455
Query: 141 RCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNS 200
+C + AL+IF KN VS +II+G
Sbjct: 456 KCKCIDKALEIFHSTLEKNIVSWTSIILGL------------------------------ 485
Query: 201 MISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIAL 260
++N + EA FR+++ R ++P S T VL ACA + +L GKEIHA A+
Sbjct: 486 ----RINNRCF-EALFFFREMIRR--LKPNSVTLVCVLSACARIGALTCGKEIHAHALRT 538
Query: 261 GLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLF 320
G+ D F+ A+++MY R + A F +++ E + G+ +A +LF
Sbjct: 539 GVSFDGFMPNAILDMYVRCGRMEYAWKQFFSVDH-EVTSWNILLTGYAERGKGAHATELF 597
Query: 321 SEMLSLDLTPDIYTVGIILSACSSLATMERGKQ-VHAYAIRCGYDSDVHIGTALVDMYAK 379
M+ +++P+ T IL ACS + G + ++ + ++ +VD+ +
Sbjct: 598 QRMVESNVSPNEVTFISILCACSRSGMVAEGLEYFNSMKYKYSIMPNLKHYACVVDLLGR 657
Query: 380 CGSLKHA-RLAYKRISTPDLVSQNAMLTAYAMHGHGKEG 417
G L+ A K PD A+L + +H H + G
Sbjct: 658 SGKLEEAYEFIQKMPMKPDPAVWGALLNSCRIHHHVELG 696
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 82/191 (42%), Gaps = 3/191 (1%)
Query: 324 LSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSL 383
L + + D Y I L C + G +V++Y + +G AL+ M+ + G+L
Sbjct: 100 LRIPVEDDAYVALIRL--CEWKRARKEGSRVYSYVSISMSHLSLQLGNALLSMFVRFGNL 157
Query: 384 KHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSAC 443
A + R+ +L S N ++ YA G E + + R+L G +PD +F L C
Sbjct: 158 VDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVGVKPDVYTFPCVLRTC 217
Query: 444 VHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMW 503
++ G E + Y + + ++ + + G++ A K+P D + W
Sbjct: 218 GGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVKCGDVNTARLVFDKMP-NRDRISW 276
Query: 504 GALLGGCVSHG 514
A++ G +G
Sbjct: 277 NAMISGYFENG 287
>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
Length = 695
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 185/552 (33%), Positives = 305/552 (55%), Gaps = 20/552 (3%)
Query: 55 ETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGK 114
+ PNL+ W+ + G + A+ + M + GL PN T +L +CA+ + G+
Sbjct: 49 QEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQ 108
Query: 115 EFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
+ HG++ + G+ + +V L+ +Y + G + A K+F + S ++ VS +I GY G
Sbjct: 109 QIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKG 168
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTF 234
+A A+++FD++ + ++SWN+MISGY + EA +F+++ M+ + P T
Sbjct: 169 YIASAQKMFDEIP----IKDVVSWNAMISGYAETGNNKEALELFKEM-MKTNVRPDESTM 223
Query: 235 GSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAA-----QMAF 289
SV+ ACA S+ G+++H+ G S+ + AL+++Y + ++ A +++
Sbjct: 224 VSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSY 283
Query: 290 DEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATME 349
++ + L+G N+Y A+ LF EML +P+ T+ IL AC+ L +E
Sbjct: 284 KDVISWNTLIGGYTH----MNLYK-EALLLFQEMLRSGESPNDVTMLSILPACAHLGAIE 338
Query: 350 RGKQVHAYA---IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLT 406
G+ +H Y ++ ++ H T+L+DMYAKCG ++ A+ + I L S NAM+
Sbjct: 339 IGRWIHVYINKRLKGVANASSH-RTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIF 397
Query: 407 AYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVK 465
+AMHG F R+ + PD I+F+ LSAC H+G + G F M Y +
Sbjct: 398 GFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKIT 457
Query: 466 PSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADR 525
P L+HY CM+DLL +G EA E I + M PD V+W +LL C HGN+E G+ A
Sbjct: 458 PKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQN 517
Query: 526 LIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRA 585
LI++EP N G+YV+L+N++A AGRW+++A+ R + D+ M K PGCS IE +H+F
Sbjct: 518 LIKIEPKNPGSYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFII 577
Query: 586 SDRSHDRSEEIY 597
D+ H R+ EIY
Sbjct: 578 GDKFHPRNREIY 589
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 123/433 (28%), Positives = 207/433 (47%), Gaps = 53/433 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY + G L+DA+KVF RD VS+ +++T A+ G + A + + + D +V
Sbjct: 132 MYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKD-----VV 186
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A+I G+ + G ++EA+ + M + P+ T+ SV+ ACA+ + LG++ H +I
Sbjct: 187 SWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWI 246
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+GF SN +VN L+D+Y +CG++ +A +F S K+ +S NT+I GY
Sbjct: 247 DDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYT--------- 297
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
H+ +LY EA +F+++L R G P T S+L A
Sbjct: 298 -------HM-------------------NLYKEALLLFQEML-RSGESPNDVTMLSILPA 330
Query: 241 CADMNSLRKGKEIHALAIAL--GLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
CA + ++ G+ IH G+ + + +L++MY + D+ AAQ FD I N
Sbjct: 331 CAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLS 390
Query: 299 LGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV---- 354
GF + A +FS M ++ PD T +LSACS ++ G+ +
Sbjct: 391 SWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSM 450
Query: 355 -HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST-PDLVSQNAMLTAYAMHG 412
Y I + H G ++D+ G K A + PD V ++L A MHG
Sbjct: 451 KEDYKITPKLE---HYG-CMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHG 506
Query: 413 HGKEGIAHFRRIL 425
+ + G ++ + ++
Sbjct: 507 NVELGESYAQNLI 519
>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Vitis vinifera]
Length = 889
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 183/601 (30%), Positives = 327/601 (54%), Gaps = 74/601 (12%)
Query: 16 KMMPERDCVSWNSVVTA-CAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGY 74
K+ ++D + N +++ C NGL+ + ++M D VSW+ +I G++Q G
Sbjct: 244 KIGIKKDVIVNNGLLSMYCKFNGLI-DGRRIFDKMVLRDA-----VSWNTMICGYSQVGL 297
Query: 75 DEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNG 134
EE+I + M + +P+ T++S+L AC L L GK H Y+ +G+ + N
Sbjct: 298 YEESIKLFMEMVNQ-FKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNI 356
Query: 135 LVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRG 194
L+++Y +CG++L++ +E+F M+ +
Sbjct: 357 LINMYAKCGNLLAS-------------------------------QEVFSGMK----CKD 381
Query: 195 IISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIH 254
+SWNSMI+ Y+ N +DEA +F+ +M+ ++P S T+ +L + L GKE+H
Sbjct: 382 SVSWNSMINVYIQNGSFDEAMKLFK--MMKTDVKPDSVTYVMLLSMSTQLGDLHLGKELH 439
Query: 255 ALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTW 314
+G S+ V LV+MY + +M D ++ EN+ + ++ TW
Sbjct: 440 CDLAKMGFNSNIVVSNTLVDMYAK-----CGEMG-DSLKVFENMKAR--------DIITW 485
Query: 315 NA--------------MQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
N +++ S M + +TPD+ T+ IL CS LA +GK++H +
Sbjct: 486 NTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFK 545
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
G +SDV +G L++MY+KCGSL+++ +K + T D+V+ A+++A M+G GK+ +
Sbjct: 546 LGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRA 605
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLS 479
F + A+G PDH++F++ + AC H+G ++ G +F M Y ++P ++HY C+VDLLS
Sbjct: 606 FGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLS 665
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
R+ L +A +FI +P+ PDS +WGALL C G+ E + ++R+IEL P++TG YV+
Sbjct: 666 RSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIELNPDDTGYYVL 725
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTI 599
++N++A G+W + R+ +K R + K PGCSW+E +++++ F + ++ EE+ +
Sbjct: 726 VSNIYAALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFFEQFEEVNKL 785
Query: 600 I 600
+
Sbjct: 786 L 786
Score = 215 bits (547), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 132/478 (27%), Positives = 230/478 (48%), Gaps = 45/478 (9%)
Query: 52 LDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLS 111
L + + N+ W+++I T NG EA+ + Q L+P+ T SV+ ACA L
Sbjct: 73 LASPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFE 132
Query: 112 LGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYC 171
+ K H + GF S+ ++ N L+D+Y C
Sbjct: 133 MAKSIHDRVLDMGFGSDLYIGNALIDMY-------------------------------C 161
Query: 172 ENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSM---FRDLLMRDGIE 228
++ +AR++F++M R ++SWNS+ISGY N ++EA + FR+L G+
Sbjct: 162 RFNDLDKARKVFEEMP----LRDVVSWNSLISGYNANGYWNEALEIYYRFRNL----GVV 213
Query: 229 PTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMA 288
P S+T SVL AC + S+ +G IH L +G++ D V L+ MYC++ L+ +
Sbjct: 214 PDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRI 273
Query: 289 FDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATM 348
FD++ + + G+ +++LF EM++ PD+ T+ IL AC L +
Sbjct: 274 FDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVN-QFKPDLLTITSILQACGHLGDL 332
Query: 349 ERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAY 408
E GK VH Y I GY+ D L++MYAKCG+L ++ + + D VS N+M+ Y
Sbjct: 333 EFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVY 392
Query: 409 AMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSL 468
+G E + F +++ + +PD ++++ LS G + G E +A ++
Sbjct: 393 IQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLSMSTQLGDLHLGKELHCDLAKMGFNSNI 451
Query: 469 KHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRL 526
+VD+ ++ GE+G++ + + + A D + W ++ CV + G R+
Sbjct: 452 VVSNTLVDMYAKCGEMGDSLKVFENMK-ARDIITWNTIIASCVHSEDCNLGLRMISRM 508
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 131/514 (25%), Positives = 231/514 (44%), Gaps = 75/514 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY + LD A+KVF+ MP RD +V
Sbjct: 159 MYCRFNDLDKARKVFEEMPLRD------------------------------------VV 182
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+++I G+ NGY EA+ + +R + G+ P++ T+SSVL AC L + G HG I
Sbjct: 183 SWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLI 242
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G + V NGL+ +Y + ++ +IF K +++ VS NT+I GY + G
Sbjct: 243 EKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVG------ 296
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LY+E+ +F + M + +P T S+L A
Sbjct: 297 -----------------------------LYEESIKLFME--MVNQFKPDLLTITSILQA 325
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C + L GK +H I G + DT L+ MY + +L+A+Q F ++ +++
Sbjct: 326 CGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSW 385
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
+ + N AM+LF +M+ D+ PD T ++LS + L + GK++H +
Sbjct: 386 NSMINVYIQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLSMSTQLGDLHLGKELHCDLAK 444
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
G++S++ + LVDMYAKCG + + ++ + D+++ N ++ + G+
Sbjct: 445 MGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRM 504
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSR 480
R+ G PD + LS L C + + G E + ++ + ++++ S+
Sbjct: 505 ISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSK 564
Query: 481 AGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
G L +++ + K+ D V W AL+ C +G
Sbjct: 565 CGSLRNSFQ-VFKLMKTKDVVTWTALISACGMYG 597
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 112/402 (27%), Positives = 185/402 (46%), Gaps = 40/402 (9%)
Query: 198 WNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALA 257
WNS+I N L+ EA S++ + R ++P ++TF SV+ ACA + K IH
Sbjct: 83 WNSIIRALTHNGLFSEALSLYSET-QRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRV 141
Query: 258 IALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAM 317
+ +G SD ++G AL++MYCR+ DL A+ F+E+ + + G+ N Y A+
Sbjct: 142 LDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEAL 201
Query: 318 QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMY 377
+++ +L + PD YT+ +L AC L ++E G +H + G DV + L+ MY
Sbjct: 202 EIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMY 261
Query: 378 AKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFL 437
K L R + ++ D VS N M+ Y+ G +E I F + + F+PD ++
Sbjct: 262 CKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFME-MVNQFKPDLLTIT 320
Query: 438 SALSACVHAGSIKTGSEFFD--------------------------LMAYYDVKPSLK-- 469
S L AC H G ++ G D L+A +V +K
Sbjct: 321 SILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCK 380
Query: 470 ---HYTCMVDLLSRAGELGEAYEFIK--KIPMAPDSVMWGALLGGCVSHGNLEFGQIAAD 524
+ M+++ + G EA + K K + PDSV + LL G+L G+
Sbjct: 381 DSVSWNSMINVYIQNGSFDEAMKLFKMMKTDVKPDSVTYVMLLSMSTQLGDLHLGKELHC 440
Query: 525 RLIELEPNNTGNYVM---LANLFAYAGRWSDLARTRQKMKDR 563
L ++ N+ N V+ L +++A G D + + MK R
Sbjct: 441 DLAKMGFNS--NIVVSNTLVDMYAKCGEMGDSLKVFENMKAR 480
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 153/364 (42%), Gaps = 63/364 (17%)
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
F S+ A A + + ++H+L I LGL L+ Y ++D ++ F +
Sbjct: 16 FSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVF-RLA 74
Query: 294 NIENLLGKMKEDGFEPNVYTWN--------------AMQLFSEMLSLDLTPDIYTVGIIL 339
+ N NVY WN A+ L+SE + L PD YT ++
Sbjct: 75 SPSN------------NVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVI 122
Query: 340 SACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLV 399
+AC+ L E K +H + G+ SD++IG AL+DMY + L AR ++ + D+V
Sbjct: 123 NACAGLLDFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVV 182
Query: 400 SQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM 459
S N++++ Y +G+ E + + R G PD + S L AC GS++ G L+
Sbjct: 183 SWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLI 242
Query: 460 AYYDVKPSL-------------------------------KHYTCMVDLLSRAGELGEAY 488
+K + + M+ S+ G E+
Sbjct: 243 EKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESI 302
Query: 489 EFIKKI--PMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIE--LEPNNTGNYVMLANLF 544
+ ++ PD + ++L C G+LEFG+ D +I E + T + +++ N++
Sbjct: 303 KLFMEMVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILI-NMY 361
Query: 545 AYAG 548
A G
Sbjct: 362 AKCG 365
>gi|259490042|ref|NP_001159140.1| hypothetical protein [Zea mays]
gi|223942207|gb|ACN25187.1| unknown [Zea mays]
gi|414585730|tpg|DAA36301.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 885
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 196/638 (30%), Positives = 327/638 (51%), Gaps = 82/638 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
M+ +CG++D A ++F + E NS++ V ALE + M D +V
Sbjct: 202 MFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERD-----VV 256
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ ++ +Q+G EA+ M+ MQ++G+ ++ T +S L ACARL L GK+ H +
Sbjct: 257 SWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQV 316
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
RN +P+V + LV++Y + G A +F+ +N V+ +I G+ + G E+
Sbjct: 317 IRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESV 376
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
ELF+QM +L+ D F +++
Sbjct: 377 ELFNQMR-------------------------------AELMTLD-----QFALATLISG 400
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQ-------------- 286
C L G+++H+L + G V +L+ MY + +L +A+
Sbjct: 401 CCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSW 460
Query: 287 ----MAFDEIENIENLLGKMKE--DGF-EPNVYTWNAM--------------QLFSEMLS 325
A+ ++ N+ K +E DG E NV TWNAM +++ MLS
Sbjct: 461 TSMITAYSQVGNV----AKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLS 516
Query: 326 LD-LTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLK 384
+ + PD T + C+ L + G Q+ ++ G D + A++ MY+KCG +
Sbjct: 517 EEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRIL 576
Query: 385 HARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACV 444
AR + ++ D+VS NAM+T Y+ HG GK+ I F IL G +PD+IS+++ LS C
Sbjct: 577 EARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCS 636
Query: 445 HAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMW 503
H+G ++ G +FD+M +++ P L+H++CMVDLL RAG L EA + I +PM P + +W
Sbjct: 637 HSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVW 696
Query: 504 GALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDR 563
GALL C HGN E ++AA + EL+ ++G+Y+++A ++A AG+ D A+ R+ M+D+
Sbjct: 697 GALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDK 756
Query: 564 RMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
+ K+PG SW+E +++H F+A D SH + I +D
Sbjct: 757 GIKKNPGYSWMEVDNKVHVFKADDVSHPQVLAIRKKLD 794
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 140/550 (25%), Positives = 254/550 (46%), Gaps = 51/550 (9%)
Query: 2 YGKCGSLDDAKKVFKM-MPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
Y CG+L DA+++ M + + ++ N ++ A G + +A+E RM + D +
Sbjct: 69 YLSCGALSDARRLLLMDIAHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARD-----VA 123
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLE-PNARTLSSVLPACARLQKLSLGKEFHGY 119
SW+ ++ G+ Q+ ++ M G PNA TL+ + +C L SL +
Sbjct: 124 SWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAM 183
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ + + V LVD++ RCG + A ++F + N+++ GY + V A
Sbjct: 184 VQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHA 243
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
ELFD M +R ++SWN M+S + EA M D+ + G+ S T+ S L
Sbjct: 244 LELFDSMP----ERDVVSWNMMVSALSQSGRVREALDMVVDMQSK-GVRLDSTTYTSSLT 298
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
ACA ++SLR GK++HA I D +V ALVE+Y + A+ F+ + + N+
Sbjct: 299 ACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVA 358
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
+ GF +++LF++M + +T D + + ++S C S + G+Q+H+ +
Sbjct: 359 WTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCL 418
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVS------------------- 400
+ G V + +L+ MYAKC +L+ A ++ ++ D+VS
Sbjct: 419 KSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKARE 478
Query: 401 ------------QNAMLTAYAMHGHGKEGIAHFRRILASGF-RPDHISFLSALSACVHAG 447
NAML AY HG ++G+ ++ +L+ + RPD +++++ C G
Sbjct: 479 FFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLG 538
Query: 448 SIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEA---YEFIKKIPMAPDSVMWG 504
+ K G + + ++ + S+ G + EA ++F+ D V W
Sbjct: 539 ANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLN----VKDIVSWN 594
Query: 505 ALLGGCVSHG 514
A++ G HG
Sbjct: 595 AMITGYSQHG 604
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 113/488 (23%), Positives = 205/488 (42%), Gaps = 68/488 (13%)
Query: 95 RTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALK-IFS 153
+ + L +C L+ + HG + G S F+ N L+ Y CG + A + +
Sbjct: 25 QAFADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLM 84
Query: 154 KFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDE 213
+ N ++ N ++ GY + G +++A ELF +M R + SWN+++SGY + Y
Sbjct: 85 DIAHPNVITHNVMLNGYAKLGRLSDAVELFGRMP----ARDVASWNTLMSGYFQSRQYLV 140
Query: 214 AFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALV 273
+ F + P +FT + +C + ++ A+ Q D+ V ALV
Sbjct: 141 SLETFLSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALV 200
Query: 274 EMYCRYQDLVAAQMAFDEIENI------ENLLGKMKEDGF-----------EPNVYTWNA 316
+M+ R + A F I+ L G +K G E +V +WN
Sbjct: 201 DMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNM 260
Query: 317 M-----QLFSEMLSLDLTPDIYTVGI---------ILSACSSLATMERGKQVHAYAIRCG 362
M Q +LD+ D+ + G+ L+AC+ L+++ GKQ+HA IR
Sbjct: 261 MVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNL 320
Query: 363 YDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFR 422
D ++ +ALV++YAK G K A+ + + + V+ +++ + +G E + F
Sbjct: 321 PHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFN 380
Query: 423 RILASGFRPDHISFLSALSAC-----------VHAGSIKTG--------SEFFDLMAYYD 463
++ A D + + +S C +H+ +K+G + + A D
Sbjct: 381 QMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCD 440
Query: 464 VKPS------------LKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCV 511
S + +T M+ S+ G + +A EF + + + W A+LG +
Sbjct: 441 NLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMS-EKNVITWNAMLGAYI 499
Query: 512 SHGNLEFG 519
HG E G
Sbjct: 500 QHGAEEDG 507
>gi|414585731|tpg|DAA36302.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 865
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 196/638 (30%), Positives = 327/638 (51%), Gaps = 82/638 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
M+ +CG++D A ++F + E NS++ V ALE + M D +V
Sbjct: 182 MFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERD-----VV 236
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ ++ +Q+G EA+ M+ MQ++G+ ++ T +S L ACARL L GK+ H +
Sbjct: 237 SWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQV 296
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
RN +P+V + LV++Y + G A +F+ +N V+ +I G+ + G E+
Sbjct: 297 IRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESV 356
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
ELF+QM +L+ D F +++
Sbjct: 357 ELFNQMR-------------------------------AELMTLD-----QFALATLISG 380
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQ-------------- 286
C L G+++H+L + G V +L+ MY + +L +A+
Sbjct: 381 CCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSW 440
Query: 287 ----MAFDEIENIENLLGKMKE--DGF-EPNVYTWNAM--------------QLFSEMLS 325
A+ ++ N+ K +E DG E NV TWNAM +++ MLS
Sbjct: 441 TSMITAYSQVGNV----AKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLS 496
Query: 326 LD-LTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLK 384
+ + PD T + C+ L + G Q+ ++ G D + A++ MY+KCG +
Sbjct: 497 EEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRIL 556
Query: 385 HARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACV 444
AR + ++ D+VS NAM+T Y+ HG GK+ I F IL G +PD+IS+++ LS C
Sbjct: 557 EARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCS 616
Query: 445 HAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMW 503
H+G ++ G +FD+M +++ P L+H++CMVDLL RAG L EA + I +PM P + +W
Sbjct: 617 HSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVW 676
Query: 504 GALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDR 563
GALL C HGN E ++AA + EL+ ++G+Y+++A ++A AG+ D A+ R+ M+D+
Sbjct: 677 GALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDK 736
Query: 564 RMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
+ K+PG SW+E +++H F+A D SH + I +D
Sbjct: 737 GIKKNPGYSWMEVDNKVHVFKADDVSHPQVLAIRKKLD 774
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 140/550 (25%), Positives = 254/550 (46%), Gaps = 51/550 (9%)
Query: 2 YGKCGSLDDAKKVFKM-MPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
Y CG+L DA+++ M + + ++ N ++ A G + +A+E RM + D +
Sbjct: 49 YLSCGALSDARRLLLMDIAHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARD-----VA 103
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLE-PNARTLSSVLPACARLQKLSLGKEFHGY 119
SW+ ++ G+ Q+ ++ M G PNA TL+ + +C L SL +
Sbjct: 104 SWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAM 163
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ + + V LVD++ RCG + A ++F + N+++ GY + V A
Sbjct: 164 VQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHA 223
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
ELFD M +R ++SWN M+S + EA M D+ + G+ S T+ S L
Sbjct: 224 LELFDSMP----ERDVVSWNMMVSALSQSGRVREALDMVVDMQSK-GVRLDSTTYTSSLT 278
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
ACA ++SLR GK++HA I D +V ALVE+Y + A+ F+ + + N+
Sbjct: 279 ACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVA 338
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
+ GF +++LF++M + +T D + + ++S C S + G+Q+H+ +
Sbjct: 339 WTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCL 398
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVS------------------- 400
+ G V + +L+ MYAKC +L+ A ++ ++ D+VS
Sbjct: 399 KSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKARE 458
Query: 401 ------------QNAMLTAYAMHGHGKEGIAHFRRILASGF-RPDHISFLSALSACVHAG 447
NAML AY HG ++G+ ++ +L+ + RPD +++++ C G
Sbjct: 459 FFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLG 518
Query: 448 SIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEA---YEFIKKIPMAPDSVMWG 504
+ K G + + ++ + S+ G + EA ++F+ D V W
Sbjct: 519 ANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLN----VKDIVSWN 574
Query: 505 ALLGGCVSHG 514
A++ G HG
Sbjct: 575 AMITGYSQHG 584
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 113/488 (23%), Positives = 205/488 (42%), Gaps = 68/488 (13%)
Query: 95 RTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALK-IFS 153
+ + L +C L+ + HG + G S F+ N L+ Y CG + A + +
Sbjct: 5 QAFADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLM 64
Query: 154 KFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDE 213
+ N ++ N ++ GY + G +++A ELF +M R + SWN+++SGY + Y
Sbjct: 65 DIAHPNVITHNVMLNGYAKLGRLSDAVELFGRMP----ARDVASWNTLMSGYFQSRQYLV 120
Query: 214 AFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALV 273
+ F + P +FT + +C + ++ A+ Q D+ V ALV
Sbjct: 121 SLETFLSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALV 180
Query: 274 EMYCRYQDLVAAQMAFDEIENI------ENLLGKMKEDGF-----------EPNVYTWNA 316
+M+ R + A F I+ L G +K G E +V +WN
Sbjct: 181 DMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNM 240
Query: 317 M-----QLFSEMLSLDLTPDIYTVGI---------ILSACSSLATMERGKQVHAYAIRCG 362
M Q +LD+ D+ + G+ L+AC+ L+++ GKQ+HA IR
Sbjct: 241 MVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNL 300
Query: 363 YDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFR 422
D ++ +ALV++YAK G K A+ + + + V+ +++ + +G E + F
Sbjct: 301 PHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFN 360
Query: 423 RILASGFRPDHISFLSALSAC-----------VHAGSIKTG--------SEFFDLMAYYD 463
++ A D + + +S C +H+ +K+G + + A D
Sbjct: 361 QMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCD 420
Query: 464 VKPS------------LKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCV 511
S + +T M+ S+ G + +A EF + + + W A+LG +
Sbjct: 421 NLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMS-EKNVITWNAMLGAYI 479
Query: 512 SHGNLEFG 519
HG E G
Sbjct: 480 QHGAEEDG 487
>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
Length = 670
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 182/555 (32%), Positives = 306/555 (55%), Gaps = 18/555 (3%)
Query: 55 ETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGK 114
+ PNL+ W+ + G + A+ + M + GL PN+ T +L +CA+L+ G
Sbjct: 24 QEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKLKASKEGL 83
Query: 115 EFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
+ HG++ + G+ + +V L+ +Y + + A K+F + S ++ VS ++ GY G
Sbjct: 84 QIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTALVTGYASRG 143
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTF 234
+ AR +FD++ + ++SWN+MISGYV+ Y EA +F+++ M+ + P T
Sbjct: 144 YIESARNMFDEIP----VKDVVSWNAMISGYVETGNYKEALELFKEM-MKTNVRPDESTM 198
Query: 235 GSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAA-----QMAF 289
+V+ A A S+ G+++H+ G S+ + AL++ Y + ++ A +++
Sbjct: 199 VTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLFLGLSY 258
Query: 290 DEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATME 349
++ + L+G N+Y A+ LF EML +P+ T+ IL AC+ L ++
Sbjct: 259 KDVISWNILIGGYTH----LNLYK-EALLLFQEMLRSGESPNDVTMLSILHACAHLGAID 313
Query: 350 RGKQVHAYAIR--CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTA 407
G+ +H Y + G + + T+L+DMY+KCG ++ A + + L + NAM+
Sbjct: 314 IGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFG 373
Query: 408 YAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKP 466
+AMHG F R+ + +PD I+F+ LSAC HAG + G F M + Y + P
Sbjct: 374 FAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYKITP 433
Query: 467 SLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRL 526
L+HY CM+DLL +G EA E I + M PD V+W +LL C HGN+E G+ A L
Sbjct: 434 KLEHYGCMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKACKMHGNVELGEKFAQNL 493
Query: 527 IELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRAS 586
++EPNN G+YV+L+N++A AGRW+++AR R + D+ M K PGCS IE +H+F
Sbjct: 494 FKIEPNNPGSYVLLSNIYATAGRWNEVARIRGLLNDKGMKKVPGCSSIEIDSVVHEFIIG 553
Query: 587 DRSHDRSEEIYTIID 601
D+ H R+ EIY +++
Sbjct: 554 DKFHPRNREIYGMLE 568
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 124/430 (28%), Positives = 202/430 (46%), Gaps = 63/430 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETP--N 58
MY + L+DA KVF RD VS+ ++VT A+ G + E ++ +E P +
Sbjct: 107 MYVQNERLEDAHKVFDRSSHRDVVSYTALVTGYASRGYI-------ESARNMFDEIPVKD 159
Query: 59 LVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHG 118
+VSW+A+I G+ + G +EA+ + M + P+ T+ +V+ A AR + LG++ H
Sbjct: 160 VVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDESTMVTVISASARSGSIELGRQVHS 219
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
+I +GF SN +VN L+D Y +CG+M +A +F S K+ +S N +I GY
Sbjct: 220 WIADHGFGSNLKIVNALIDFYSKCGEMETACGLFLGLSYKDVISWNILIGGYT------- 272
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
HL +LY EA +F+++L R G P T S+L
Sbjct: 273 ---------HL-------------------NLYKEALLLFQEML-RSGESPNDVTMLSIL 303
Query: 239 IACADMNSLRKGKEIHALAIAL--GLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
ACA + ++ G+ IH G+ + + + +L++MY + D+ AA F+ + +
Sbjct: 304 HACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKS 363
Query: 297 NLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV-- 354
GF + A +FS M ++ PD T +LSACS ++ G+ +
Sbjct: 364 LPAWNAMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFR 423
Query: 355 ---HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST----PDLVSQNAMLTA 407
H Y I + H G ++D+ G K A + IST PD V ++L A
Sbjct: 424 SMTHNYKITPKLE---HYG-CMIDLLGHSGLFKEAE---EMISTMTMEPDGVIWCSLLKA 476
Query: 408 YAMHGHGKEG 417
MHG+ + G
Sbjct: 477 CKMHGNVELG 486
>gi|224070863|ref|XP_002303270.1| predicted protein [Populus trichocarpa]
gi|222840702|gb|EEE78249.1| predicted protein [Populus trichocarpa]
Length = 805
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 190/610 (31%), Positives = 316/610 (51%), Gaps = 68/610 (11%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
+L SW+ ++GG+T+ G+ +EA+ + R+ G+ P+ T SVL +CA L G+E H
Sbjct: 99 DLFSWNVLVGGYTKAGFFDEALCLYHRILWAGIRPDVYTFPSVLRSCAGAMDLVRGREVH 158
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
++ R F + VVN L+ +Y +CGD++SA +F K ++ +S N +I GY EN
Sbjct: 159 AHVVRFDFDMDVDVVNALITMYVKCGDVVSARMLFDKMPTRDRISWNAMISGYFENDECL 218
Query: 178 EARELFDQMEHLGVQRGIISWNSMISG---------------YVDNSLYD---------- 212
E ELF +M L + +++ S+IS YV + YD
Sbjct: 219 EGLELFFRMRELSIDPDLMTMTSVISACELLGDERLGTQLHSYVVRTAYDGNISVYNSLI 278
Query: 213 ----------EAFSMFRDLLMRD------------------------------GIEPTSF 232
EA S+F + RD G P
Sbjct: 279 QMYLSVGHWKEAESVFSGMECRDVVSWTTIISGCVDNLLPDKALETYKTMEITGTMPDEV 338
Query: 233 TFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI 292
T SVL ACA + L G ++H LA G V +L++MY + + + A F +I
Sbjct: 339 TIASVLSACASLGQLDMGMKLHELAERTGHILYVVVANSLIDMYSKCKRIEKALEIFHQI 398
Query: 293 ENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGK 352
+ + + +G N + A+ F +M+ L P+ T+ LSAC+ + + GK
Sbjct: 399 PDKDVISWTSVINGLRINNRCFEALIFFRKMI-LKSKPNSVTLISALSACARVGALMCGK 457
Query: 353 QVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHG 412
++HA+A++ G D + A++D+Y +CG ++ A L ++ D+ + N +LT YA G
Sbjct: 458 EIHAHALKAGMGFDGFLPNAILDLYVRCGRMRTA-LNQFNLNEKDVGAWNILLTGYAQKG 516
Query: 413 HGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHY 471
G + F+R++ S PD ++F+S L AC +G + G E+F M Y + P+LKHY
Sbjct: 517 KGAMVMELFKRMVESEINPDDVTFISLLCACSRSGMVTEGLEYFQRMKVNYHITPNLKHY 576
Query: 472 TCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEP 531
C+VDLL RAG+L EA+EFI+++P+ PD +WGALL C H ++ G++AA + + +
Sbjct: 577 ACVVDLLGRAGKLNEAHEFIERMPIKPDPAIWGALLNACRIHRHVLLGELAAQHIFKQDA 636
Query: 532 NNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHD 591
+ G Y++L NL+A +G+W ++A+ R+ MK+ + PGCSW+E + ++H F + D H
Sbjct: 637 ESIGYYILLCNLYADSGKWDEVAKVRRTMKEEGLIVDPGCSWVEVKGKVHAFLSGDNFHP 696
Query: 592 RSEEIYTIID 601
+ +EI +++
Sbjct: 697 QMQEINVVLE 706
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 170/352 (48%), Gaps = 18/352 (5%)
Query: 164 NTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLM 223
N ++ + G+V A +F +M +R + SWN ++ GY +DEA ++ +L
Sbjct: 73 NALLSMFVRFGDVGNAWNVFGRMG----ERDLFSWNVLVGGYTKAGFFDEALCLYHRILW 128
Query: 224 RDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLV 283
GI P +TF SVL +CA L +G+E+HA + D V AL+ MY + D+V
Sbjct: 129 A-GIRPDVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVKCGDVV 187
Query: 284 AAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACS 343
+A+M FD++ + + G+ N ++LF M L + PD+ T+ ++SAC
Sbjct: 188 SARMLFDKMPTRDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVISACE 247
Query: 344 SLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNA 403
L G Q+H+Y +R YD ++ + +L+ MY G K A + + D+VS
Sbjct: 248 LLGDERLGTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGMECRDVVSWTT 307
Query: 404 MLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDL----- 458
+++ + + + ++ + +G PD ++ S LSAC G + G + +L
Sbjct: 308 IISGCVDNLLPDKALETYKTMEITGTMPDEVTIASVLSACASLGQLDMGMKLHELAERTG 367
Query: 459 -MAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
+ Y V SL +D+ S+ + +A E +IP D + W +++ G
Sbjct: 368 HILYVVVANSL------IDMYSKCKRIEKALEIFHQIP-DKDVISWTSVING 412
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 123/260 (47%), Gaps = 29/260 (11%)
Query: 268 VGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWN------------ 315
+G AL+ M+ R+ D + N N+ G+M E ++++WN
Sbjct: 71 LGNALLSMFVRFGD----------VGNAWNVFGRMGER----DLFSWNVLVGGYTKAGFF 116
Query: 316 --AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTAL 373
A+ L+ +L + PD+YT +L +C+ + RG++VHA+ +R +D DV + AL
Sbjct: 117 DEALCLYHRILWAGIRPDVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNAL 176
Query: 374 VDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDH 433
+ MY KCG + AR+ + ++ T D +S NAM++ Y + EG+ F R+ PD
Sbjct: 177 ITMYVKCGDVVSARMLFDKMPTRDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDL 236
Query: 434 ISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKK 493
++ S +SAC G + G++ + ++ Y ++ + G EA
Sbjct: 237 MTMTSVISACELLGDERLGTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSG 296
Query: 494 IPMAPDSVMWGALLGGCVSH 513
+ D V W ++ GCV +
Sbjct: 297 ME-CRDVVSWTTIISGCVDN 315
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 125/298 (41%), Gaps = 51/298 (17%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC ++ A ++F +P++D +SW SV+ N EAL
Sbjct: 381 MYSKCKRIEKALEIFHQIPDKDVISWTSVINGLRINNRCFEAL----------------- 423
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+ FR +PN+ TL S L ACAR+ L GKE H +
Sbjct: 424 --------------------IFFRKMILKSKPNSVTLISALSACARVGALMCGKEIHAHA 463
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G + F+ N ++D+Y RCG M +AL F+ + K+ + N ++ GY + G A
Sbjct: 464 LKAGMGFDGFLPNAILDLYVRCGRMRTALNQFN-LNEKDVGAWNILLTGYAQKGKGAMVM 522
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
ELF +M + +++ S++ + + E F+ + + I P + V+
Sbjct: 523 ELFKRMVESEINPDDVTFISLLCACSRSGMVTEGLEYFQRMKVNYHITPNLKHYACVVDL 582
Query: 241 CADMNSLRKGK--EIHALAIALGLQSDTFVGGALVEMYCRYQDLV-----AAQMAFDE 291
R GK E H + ++ D + GAL+ CR V AAQ F +
Sbjct: 583 LG-----RAGKLNEAHEFIERMPIKPDPAIWGALLNA-CRIHRHVLLGELAAQHIFKQ 634
>gi|119638439|gb|ABL85030.1| hypothetical protein 57h21.3 [Brachypodium sylvaticum]
Length = 618
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 192/598 (32%), Positives = 312/598 (52%), Gaps = 59/598 (9%)
Query: 5 CGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSA 64
G + DA+++F P+RD VSW ++V A A G++ +A +R + N+V+W+A
Sbjct: 48 AGRVSDARRLFDRTPDRDVVSWTALVAAYARQGMLHDARALFDR----PDARRNVVTWTA 103
Query: 65 VIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNG 124
++ G+ + G +EA + RM E N + +++L A S G+ + +G
Sbjct: 104 LLSGYARAGRVDEAEALFQRMP----ERNVVSWNTMLEAYT-----SAGRVRDAWTLFDG 154
Query: 125 F-MSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELF 183
+ + N L+ R G+M A K+F + +N ++ T++ G +G+V EAR LF
Sbjct: 155 MPVRDAGSWNILLAALVRSGNMDKARKLFDRMPERNVMAWTTMVAGIARSGSVDEARALF 214
Query: 184 DQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACAD 243
D M +R ++SWN+MISGY N DEA +F + RD A
Sbjct: 215 DGMP----ERNVVSWNAMISGYARNHRIDEAHDLFMKMPTRD---------------IAS 255
Query: 244 MNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMK 303
N + G + + +DL AQ FD++ +
Sbjct: 256 WNIMITG-------------------------FIQDRDLERAQDLFDKMPRRNVITWTTM 290
Query: 304 EDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGY 363
+G+ ++ + A+Q+F+ ML + P+ T + ACS+LA + G+QVH + +
Sbjct: 291 MNGYLQSMQSETALQIFNGMLVEGIRPNQVTFLGAVDACSNLAGLSEGQQVHQMICKTSF 350
Query: 364 DSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRR 423
D I + L+++YAKCG ++ AR + D++S N M+ AYA HG G E I + +
Sbjct: 351 QFDTFIESTLMNLYAKCGEIRLARKVFDLSKEKDVISWNGMIAAYAHHGVGVEAIHLYEK 410
Query: 424 ILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAG 482
+ G++P+ ++++ LSAC H+G + G F+ M + +HYTC++DL SRAG
Sbjct: 411 MQEKGYKPNDVTYVGLLSACSHSGLVDEGLRIFEYMVKDRSIAVRDEHYTCLIDLCSRAG 470
Query: 483 ELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLAN 542
LG+A I + + P S +W ALLGGC SHGN G +AA L+E EPNN G Y +L N
Sbjct: 471 RLGDAKRLIHFLKVEPSSTVWNALLGGCNSHGNESIGDLAARNLLEAEPNNAGTYTLLCN 530
Query: 543 LFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTII 600
++A AG+W + A+ R +M DR + K PGCSWIE +++H F + D+SH S+ I +++
Sbjct: 531 IYASAGKWKEAAKIRSEMNDRGLKKQPGCSWIEVENKVHVFVSRDKSHSESDLINSLL 588
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 114/442 (25%), Positives = 204/442 (46%), Gaps = 52/442 (11%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y + G +D+A+ +F+ MPER+ VSWN+++ A + G V +A + M D S
Sbjct: 108 YARAGRVDEAEALFQRMPERNVVSWNTMLEAYTSAGRVRDAWTLFDGMPVRDAG-----S 162
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKE-FHGYI 120
W+ ++ ++G ++A + RM E N ++++ AR + + F G
Sbjct: 163 WNILLAALVRSGNMDKARKLFDRMP----ERNVMAWTTMVAGIARSGSVDEARALFDGMP 218
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R N N ++ Y R + A +F K ++ S N +I G+ ++ ++ A+
Sbjct: 219 ER-----NVVSWNAMISGYARNHRIDEAHDLFMKMPTRDIASWNIMITGFIQDRDLERAQ 273
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+LFD+M +R +I+W +M++GY+ + + A +F +L+ +GI P TF + A
Sbjct: 274 DLFDKMP----RRNVITWTTMMNGYLQSMQSETALQIFNGMLV-EGIRPNQVTFLGAVDA 328
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C+++ L +G+++H + Q DTF+ L+ +Y + ++ A+ FD L
Sbjct: 329 CSNLAGLSEGQQVHQMICKTSFQFDTFIESTLMNLYAKCGEIRLARKVFD--------LS 380
Query: 301 KMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSSLA 346
K E +V +WN M L+ +M P+ T +LSACS
Sbjct: 381 K------EKDVISWNGMIAAYAHHGVGVEAIHLYEKMQEKGYKPNDVTYVGLLSACSHSG 434
Query: 347 TMERGKQVHAYAI--RCGYDSDVHIGTALVDMYAKCGSLKHA-RLAYKRISTPDLVSQNA 403
++ G ++ Y + R D H T L+D+ ++ G L A RL + P NA
Sbjct: 435 LVDEGLRIFEYMVKDRSIAVRDEHY-TCLIDLCSRAGRLGDAKRLIHFLKVEPSSTVWNA 493
Query: 404 MLTAYAMHGHGKEGIAHFRRIL 425
+L HG+ G R +L
Sbjct: 494 LLGGCNSHGNESIGDLAARNLL 515
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 60/117 (51%), Gaps = 2/117 (1%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KCG + A+KVF + E+D +SWN ++ A A +G+ +EA+ E+M PN V
Sbjct: 363 LYAKCGEIRLARKVFDLSKEKDVISWNGMIAAYAHHGVGVEAIHLYEKMQE-KGYKPNDV 421
Query: 61 SWSAVIGGFTQNGYDEEAIGML-FRMQAEGLEPNARTLSSVLPACARLQKLSLGKEF 116
++ ++ + +G +E + + + ++ + + ++ C+R +L K
Sbjct: 422 TYVGLLSACSHSGLVDEGLRIFEYMVKDRSIAVRDEHYTCLIDLCSRAGRLGDAKRL 478
>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
Length = 865
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 197/609 (32%), Positives = 312/609 (51%), Gaps = 80/609 (13%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KCG + DA+ +F M ERD V WN
Sbjct: 227 IYSKCGRMRDARLLFDWMRERDVVLWN--------------------------------- 253
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPAC--ARLQKLSLGKEFHG 118
++ G+ Q G ++EA + GL P+ ++ +L C A L LGK+ HG
Sbjct: 254 ---MMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHG 310
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
++G S+ V N LV++Y + G C
Sbjct: 311 IAVKSGLDSDVSVANSLVNMYSKMG-------------------CAYF------------ 339
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
ARE+F+ M+HL +ISWNSMIS +SL +E+ ++F DLL +G++P FT S+
Sbjct: 340 AREVFNDMKHLD----LISWNSMISSCAQSSLEEESVNLFIDLL-HEGLKPDHFTLASIT 394
Query: 239 IA-----CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
+A C + L +GK+IHA AI G SD V +++MY + D+V A + F+ I
Sbjct: 395 LATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYIS 454
Query: 294 NIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ 353
+++ G N A++++ M + PD YT ++ A S + +E+G+Q
Sbjct: 455 APDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQ 514
Query: 354 VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGH 413
+HA I+ SD +GT+LVDMYAKCG+++ A +K+++ ++ NAML A HG+
Sbjct: 515 LHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGN 574
Query: 414 GKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYT 472
+E + F+ + + G PD +SF+ LSAC HAG E+ M Y ++P ++HY+
Sbjct: 575 AEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYS 634
Query: 473 CMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPN 532
C+VD L RAG + EA + I+ +P + + ALLG C G++E G+ A RL LEP
Sbjct: 635 CLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVETGKRVAARLFALEPF 694
Query: 533 NTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDR 592
++ YV+L+N++A A RW D+ R+ MK + + K PG SWI+ ++ +H F DRSH +
Sbjct: 695 DSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSWIDVKNMLHLFVVDDRSHPQ 754
Query: 593 SEEIYTIID 601
++ IY ++
Sbjct: 755 ADIIYDKVE 763
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 141/535 (26%), Positives = 244/535 (45%), Gaps = 97/535 (18%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGSL A++VF PERD LV
Sbjct: 121 MYSKCGSLSSARQVFDTTPERD------------------------------------LV 144
Query: 61 SWSAVIGGF-----TQNGYDEEAIGMLFRMQAEGLEPNAR-TLSSVLPACARLQKLSLGK 114
+W+A++G + + +G +E + LFR+ L R TL+ VL C L +
Sbjct: 145 TWNAILGAYAASVDSNDGNAQEGL-HLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAE 203
Query: 115 EFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
HGY + G + FV LV++Y +CG M A +F ++ V N ++ GY +
Sbjct: 204 GVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQ-- 261
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTF 234
LG+++ EAF +F + R G+ P F+
Sbjct: 262 --------------LGLEK-------------------EAFQLFSE-FHRSGLRPDEFSV 287
Query: 235 GSVLIAC--ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI 292
+L C A + L GK++H +A+ GL SD V +LV MY + A+ F+++
Sbjct: 288 QLILNGCLWAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDM 347
Query: 293 ENIE-----NLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIIL-----SAC 342
++++ +++ + E ++ LF ++L L PD +T+ I AC
Sbjct: 348 KHLDLISWNSMISSCAQSSLEE-----ESVNLFIDLLHEGLKPDHFTLASITLATAAKAC 402
Query: 343 SSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQN 402
L +++GKQ+HA+AI+ G+DSD+H+ + ++DMY KCG + +A + + IS PD V+
Sbjct: 403 GCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWT 462
Query: 403 AMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYY 462
+M++ +G+ + + + R+ S PD +F + + A +++ G + +
Sbjct: 463 SMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKL 522
Query: 463 DVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
D T +VD+ ++ G + +AY KK+ + + +W A+L G HGN E
Sbjct: 523 DCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVR-NIALWNAMLVGLAQHGNAE 576
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 125/435 (28%), Positives = 200/435 (45%), Gaps = 79/435 (18%)
Query: 108 QKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTII 167
L LGK H I +G + F+ N L+ +Y +CG + SA
Sbjct: 91 HNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSA------------------- 131
Query: 168 VGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYV-----DNSLYDEAFSMFRDLL 222
R++FD +R +++WN+++ Y ++ E +FR L
Sbjct: 132 ------------RQVFDTTP----ERDLVTWNAILGAYAASVDSNDGNAQEGLHLFR--L 173
Query: 223 MRDGIEPTS-FTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQD 281
+R + T+ T VL C + L + +H AI +GL+ D FV GALV +Y +
Sbjct: 174 LRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGR 233
Query: 282 LVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSA 341
+ A++ FD + + +L M G+ A QLFSE L PD ++V +IL+
Sbjct: 234 MRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNG 293
Query: 342 CSSLAT--MERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLV 399
C T +E GKQVH A++ G DSDV + +LV+MY+K G AR + + DL+
Sbjct: 294 CLWAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLI 353
Query: 400 SQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDH-----ISFLSALSAC----------- 443
S N+M+++ A +E + F +L G +PDH I+ +A AC
Sbjct: 354 SWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASITLATAAKACGCLVLLDQGKQ 413
Query: 444 VHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGEL---GEAYEFIKKIPMAPDS 500
+HA +IK G FD L + ++D+ + G++ G + +I APD
Sbjct: 414 IHAHAIKAG---FD--------SDLHVNSGILDMYIKCGDMVNAGIVFNYIS----APDD 458
Query: 501 VMWGALLGGCVSHGN 515
V W +++ GCV +GN
Sbjct: 459 VAWTSMISGCVDNGN 473
>gi|255558480|ref|XP_002520265.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540484|gb|EEF42051.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 681
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 189/637 (29%), Positives = 332/637 (52%), Gaps = 67/637 (10%)
Query: 1 MYGKCG-SLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERM---------- 49
MY +CG ++ DA +F MPER+C SWN+++ G +L+ + M
Sbjct: 50 MYARCGGTMTDAHNLFDEMPERNCFSWNTMIEGYMRVGDKERSLKLFDLMPQKNDYSWNV 109
Query: 50 --------------SSLDNETP--NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEP- 92
L NE P N V+W+++I G+ +NG+ EA+G+ + + LE
Sbjct: 110 VISGFAKAGELDVAKKLFNEMPRRNGVAWNSMIHGYARNGFAREAVGLFKELNSNPLEKS 169
Query: 93 --NARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALK 150
+ L+SV+ ACA L + GK+ H I + + +++ L+++Y +CG + +A
Sbjct: 170 CGDTFVLASVIGACADLGAIEYGKQVHARILMDDVELDSVLISSLINLYAKCGHLDTANY 229
Query: 151 IFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSL 210
+ ++ S + +I+GY G +++A +F + + WNS+ISGYV+N
Sbjct: 230 VLKMMDEVDDFSLSALIMGYANCGRMSDAVRIFRTKSN----PCFVVWNSLISGYVNNHE 285
Query: 211 YDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGG 270
+AF++ ++ + ++ S T +L AC+ + + K++H +GL V
Sbjct: 286 EMKAFALVNEM-KNNRVQVDSSTITVILSACSSTGNAQYAKQMHGYVCKVGLIDSVIVAS 344
Query: 271 ALVEMYCRYQDLVAAQMAFDEIENIENLL-----------GKMKED-------------- 305
A ++ Y + ++ A F E++ + +L G++++
Sbjct: 345 AFIDAYSKCRNPNDACKLFSELKAYDTVLLNSMITAYCNCGRIRDAKNIFETMPSKSLIS 404
Query: 306 ------GFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
G N Y A+ +F +M LDL D +++ ++SAC+ ++++E G+QV A AI
Sbjct: 405 WNSIIVGLAQNAYPLEALDVFGKMNKLDLRMDRFSLASVISACACISSLELGEQVFARAI 464
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
G +SD + T+LVD Y KCG +++ R + + D VS N+ML YA +G+G E +
Sbjct: 465 ITGLESDQAVSTSLVDFYCKCGFIENGRKLFDSMIKTDEVSWNSMLMGYATNGYGLETLT 524
Query: 420 HFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLL 478
F + +G RP I+F LSAC H G ++ G ++F++M Y Y + P ++HY+CMVDL
Sbjct: 525 LFNEMKQAGLRPTDITFTGVLSACDHCGLVEEGRKWFNIMKYDYHIDPGIEHYSCMVDLF 584
Query: 479 SRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYV 538
+RAG L EA ++ +P D MW ++L GCV+HG+ + G+ A ++I+L P ++ YV
Sbjct: 585 ARAGCLKEALNLVEHMPFEADCSMWSSVLRGCVAHGDKDLGKKVAQQIIQLNPESSSAYV 644
Query: 539 MLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIE 575
L+ +FA +G W A R+ M ++++ K PG SW +
Sbjct: 645 QLSGIFATSGDWESSALVRKIMTEKQVKKHPGFSWAD 681
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 108/241 (44%), Gaps = 18/241 (7%)
Query: 331 DIYTVGIILSACSSLATMERGKQVHAYAIRCGY-DSDVHIGTALVDMYAKC-GSLKHARL 388
++ ++ +L + ++ +++ +GKQ+H ++ G ++ V + L+ MYA+C G++ A
Sbjct: 4 ELRSLARLLQSLNTHSSIHQGKQLHLLFLKKGLINATVSLANRLLQMYARCGGTMTDAHN 63
Query: 389 AYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGS 448
+ + + S N M+ Y G + + F + + + S+ +S AG
Sbjct: 64 LFDEMPERNCFSWNTMIEGYMRVGDKERSLKLFDLMP----QKNDYSWNVVISGFAKAGE 119
Query: 449 IKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAP------DSVM 502
+ + F+ M + + + M+ +R G EA K++ P D+ +
Sbjct: 120 LDVAKKLFNEMP----RRNGVAWNSMIHGYARNGFAREAVGLFKELNSNPLEKSCGDTFV 175
Query: 503 WGALLGGCVSHGNLEFG-QIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMK 561
+++G C G +E+G Q+ A L++ ++ L NL+A G D A KM
Sbjct: 176 LASVIGACADLGAIEYGKQVHARILMDDVELDSVLISSLINLYAKCGHL-DTANYVLKMM 234
Query: 562 D 562
D
Sbjct: 235 D 235
>gi|90657601|gb|ABD96900.1| hypothetical protein [Cleome spinosa]
Length = 924
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 207/693 (29%), Positives = 345/693 (49%), Gaps = 133/693 (19%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWN--------------------------------- 27
MY KC LD++ VF MP+++ +SW+
Sbjct: 225 MYAKCKRLDESFTVFYAMPQKNWISWSAIIAGCVQNNFLDGGLKMFKEMQKVGVGVSQSI 284
Query: 28 --SVVTACAA-------NGLVLEALEC------LERMSSLD-----------------NE 55
SV+ +CA L AL+ + R ++LD +E
Sbjct: 285 YASVLKSCATLPDLRLGTQLHAHALKSDFVKDGIVRTATLDMYAKCNNMQDAQRLFDMSE 344
Query: 56 TPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKE 115
NL S++A+I G++Q A+ + ++ L + +LS L ACA ++ LS G +
Sbjct: 345 NLNLQSYNAMITGYSQKDNGFRALLLFRKLSKSSLGFDEISLSGALRACATVKGLSEGLQ 404
Query: 116 FHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGN 175
HG T++ F N V N +D+Y +C + A ++F + K+ VS
Sbjct: 405 LHGLATKSNFSRNICVANAFIDMYGKCEALDEACRVFDEMGRKDAVS------------- 451
Query: 176 VAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFG 235
WN++I+ + N + ++ +L R G+EP +TFG
Sbjct: 452 ----------------------WNAIIAAHEQNEERSKTLNILVSML-RSGMEPDEYTFG 488
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI--- 292
SVL ACA +SL G EIH + LG+ S+ ++G +LV+MY + + A+ ++I
Sbjct: 489 SVLKACAG-DSLNHGMEIHTTIVKLGMASNPYIGSSLVDMYSKCGMIDEAEKIHNKIFIG 547
Query: 293 -----------ENIENLLGKMKEDGFEPNVYTWNAM--------------QLFSEMLSLD 327
E IE G +++ + + +WNA+ + F+ M+ +
Sbjct: 548 IGDSNTYSEHPETIEEPKG-IQDRRVQEMIVSWNAIISGYVMRKQSEDAQRFFNRMMEMG 606
Query: 328 LTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHAR 387
+TPD +T +L C++LA++ GKQ+HA+ I+ DV+I + LVDMY+KCG+L +R
Sbjct: 607 ITPDKFTYSTVLDTCANLASIGLGKQIHAHVIKKELQYDVYICSTLVDMYSKCGNLHDSR 666
Query: 388 LAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAG 447
L +++ D V+ NAM+ YA HG G+E I F ++ P+H +F+S L AC H G
Sbjct: 667 LMFEKAPIRDFVTWNAMICGYAHHGMGEEAIKLFESMVLMNIMPNHATFVSLLRACAHMG 726
Query: 448 SIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGAL 506
++ G ++F +M Y + P L+HY+ MVD+L ++GE+ +A E I+++P D V+W L
Sbjct: 727 LVERGLDYFHMMKKEYGLDPRLEHYSNMVDILGKSGEVEKALELIQEMPFEADDVIWRTL 786
Query: 507 LGGC-VSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRM 565
L C ++ N+E ++AA+ L+ L+P ++ Y++L+N++A AG W + R M+ ++
Sbjct: 787 LSACKINRNNVEAAEVAANALLRLDPQDSSTYILLSNIYADAGMWDKASELRTAMRSDKL 846
Query: 566 HKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYT 598
K PGCSW+E RDE H F D++H R +EIY
Sbjct: 847 KKEPGCSWVEIRDEFHTFLVGDKAHPRWKEIYN 879
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 142/555 (25%), Positives = 248/555 (44%), Gaps = 68/555 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y CG+L A K+F MP RD VSWN+++ AA+ ++ A C E M + D +V
Sbjct: 93 LYINCGNLGYATKLFDGMPLRDVVSWNAMIFGYAASNDMVRASLCFEMMPTRD-----VV 147
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW++++ GF Q G + E++ + M G+E + ++ S +L C+ L+ LG + HG
Sbjct: 148 SWNSMLSGFLQTGENLESVKVFIEMGRSGVEFDNKSFSVILKVCSILENYKLGTQIHGIA 207
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R G+ ++ + L+D+Y +C + + +F KN +S + II G +N +
Sbjct: 208 LRMGYDTDVVSGSALLDMYAKCKRLDESFTVFYAMPQKNWISWSAIIAGCVQNNFLDGGL 267
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
++F +M+ +GV V S+Y SVL +
Sbjct: 268 KMFKEMQKVGVG-------------VSQSIY-----------------------ASVLKS 291
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA + LR G ++HA A+ D V A ++MY + ++ AQ FD EN+
Sbjct: 292 CATLPDLRLGTQLHAHALKSDFVKDGIVRTATLDMYAKCNNMQDAQRLFDMSENLNLQSY 351
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G+ + A+ LF ++ L D ++ L AC+++ + G Q+H A +
Sbjct: 352 NAMITGYSQKDNGFRALLLFRKLSKSSLGFDEISLSGALRACATVKGLSEGLQLHGLATK 411
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
+ ++ + A +DMY KC +L A + + D VS NA++ A+ + + +
Sbjct: 412 SNFSRNICVANAFIDMYGKCEALDEACRVFDEMGRKDAVSWNAIIAAHEQNEERSKTLNI 471
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSR 480
+L SG PD +F S L AC S+ G E + + + + +VD+ S+
Sbjct: 472 LVSMLRSGMEPDEYTFGSVLKACA-GDSLNHGMEIHTTIVKLGMASNPYIGSSLVDMYSK 530
Query: 481 AGELGEAYEFIKKIPMA----------PDS----------------VMWGALLGGCVSHG 514
G + EA + KI + P++ V W A++ G V
Sbjct: 531 CGMIDEAEKIHNKIFIGIGDSNTYSEHPETIEEPKGIQDRRVQEMIVSWNAIISGYVMRK 590
Query: 515 NLEFGQIAADRLIEL 529
E Q +R++E+
Sbjct: 591 QSEDAQRFFNRMMEM 605
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 109/414 (26%), Positives = 200/414 (48%), Gaps = 6/414 (1%)
Query: 96 TLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKF 155
S V CA+ + LGK+ H ++ +GF FV N L+ +Y CG++ A K+F
Sbjct: 51 NFSFVFKECAKQRAHELGKQAHAHMIISGFRPTVFVSNCLLQLYINCGNLGYATKLFDGM 110
Query: 156 SIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAF 215
+++ VS N +I GY + ++ A F+ M R ++SWNSM+SG++ E+
Sbjct: 111 PLRDVVSWNAMIFGYAASNDMVRASLCFEMMP----TRDVVSWNSMLSGFLQTGENLESV 166
Query: 216 SMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEM 275
+F ++ R G+E + +F +L C+ + + + G +IH +A+ +G +D G AL++M
Sbjct: 167 KVFIEM-GRSGVEFDNKSFSVILKVCSILENYKLGTQIHGIALRMGYDTDVVSGSALLDM 225
Query: 276 YCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTV 335
Y + + L + F + + G N + +++F EM + +
Sbjct: 226 YAKCKRLDESFTVFYAMPQKNWISWSAIIAGCVQNNFLDGGLKMFKEMQKVGVGVSQSIY 285
Query: 336 GIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST 395
+L +C++L + G Q+HA+A++ + D + TA +DMYAKC +++ A+ +
Sbjct: 286 ASVLKSCATLPDLRLGTQLHAHALKSDFVKDGIVRTATLDMYAKCNNMQDAQRLFDMSEN 345
Query: 396 PDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEF 455
+L S NAM+T Y+ +G + FR++ S D IS AL AC + G +
Sbjct: 346 LNLQSYNAMITGYSQKDNGFRALLLFRKLSKSSLGFDEISLSGALRACATVKGLSEGLQL 405
Query: 456 FDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
L + ++ +D+ + L EA ++ D+V W A++
Sbjct: 406 HGLATKSNFSRNICVANAFIDMYGKCEALDEACRVFDEMG-RKDAVSWNAIIAA 458
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 86/213 (40%), Gaps = 32/213 (15%)
Query: 338 ILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHA----------- 386
+ C+ E GKQ HA+ I G+ V + L+ +Y CG+L +A
Sbjct: 55 VFKECAKQRAHELGKQAHAHMIISGFRPTVFVSNCLLQLYINCGNLGYATKLFDGMPLRD 114
Query: 387 --------------------RLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILA 426
L ++ + T D+VS N+ML+ + G E + F +
Sbjct: 115 VVSWNAMIFGYAASNDMVRASLCFEMMPTRDVVSWNSMLSGFLQTGENLESVKVFIEMGR 174
Query: 427 SGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGE 486
SG D+ SF L C + K G++ + + + ++D+ ++ L E
Sbjct: 175 SGVEFDNKSFSVILKVCSILENYKLGTQIHGIALRMGYDTDVVSGSALLDMYAKCKRLDE 234
Query: 487 AYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFG 519
++ +P + + W A++ GCV + L+ G
Sbjct: 235 SFTVFYAMP-QKNWISWSAIIAGCVQNNFLDGG 266
>gi|255544622|ref|XP_002513372.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547280|gb|EEF48775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 597
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 188/580 (32%), Positives = 305/580 (52%), Gaps = 74/580 (12%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y K G +A+KVF MPER N+VS
Sbjct: 82 YVKFGETINARKVFDRMPER------------------------------------NVVS 105
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W+A I G+ +NG+ ++A+ + +M G+ N T SVL AC L+ L G + HG I
Sbjct: 106 WTAQISGYAKNGHYQDALLVFSQMGRAGVRANQFTYGSVLRACTGLRCLERGMQIHGCIQ 165
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
+N F+ N FV + LVD++ +CG+M +AR
Sbjct: 166 KNRFIGNLFVQSALVDLHSKCGNM-------------------------------EDARY 194
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
LF+ M +R ++SWN++I GY D++F MF + M +G+ P FT GSVL A
Sbjct: 195 LFETMS----ERDVVSWNAVIGGYAAQDFNDDSFRMFYSM-MGEGVTPDCFTLGSVLKAS 249
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK 301
+ N+L K +IH + I LG S + G+L++ Y + + + +A + + + +
Sbjct: 250 SRANNLIKVCQIHGIIIQLGFGSHIDLNGSLIDAYAKSEGMKSASALYKSMLKKDVISFT 309
Query: 302 MKEDGFEPNV-YTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G+ Y+ A+ LF +M + + D T +L+ C+ +A++ G+Q+HA AI+
Sbjct: 310 AIMTGYARKCSYSREALDLFKDMQHIFMEIDDVTFCTMLNVCADIASLSIGRQIHALAIK 369
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
DV G ALVDMYAK G ++ A A+ + +++S +++T Y HG+G E IA
Sbjct: 370 YKPSYDVATGNALVDMYAKSGEIEDATRAFYEMKEKNVISWTSLITGYGKHGYGHEAIAL 429
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFD-LMAYYDVKPSLKHYTCMVDLLS 479
++++ G +P+ I+FLS L AC H+G G E F+ ++ Y++ P +HY+CM+DL +
Sbjct: 430 YKKMEYEGLKPNDITFLSLLFACSHSGLTGEGWECFNNMITKYNILPRAEHYSCMIDLFA 489
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
R G+L EAY I K+ + P+S +WGA+LG C +G++ G++AA L+ ++P N+ NYV+
Sbjct: 490 RGGQLEEAYNMICKMNIKPNSSLWGAILGACSIYGHMSLGEVAATHLLRMDPENSANYVV 549
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDE 579
LA ++A +G W R R M+ R + K PG S I+ ++
Sbjct: 550 LAGIYAASGSWDKACRMRNLMEYRSLKKIPGYSIIQSTNK 589
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 123/474 (25%), Positives = 213/474 (44%), Gaps = 56/474 (11%)
Query: 84 RMQAEGLEPNARTLSS-----VLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDV 138
R EP LSS +L C + L G H +I RNGF SN
Sbjct: 22 RFHHSPCEPELTHLSSSLYMKILQLCIETEDLKQGCLIHSHIIRNGFDSN---------- 71
Query: 139 YRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISW 198
L + +K +I+ Y + G AR++FD+M +R ++SW
Sbjct: 72 ----------LHLSTK-----------LIIFYVKFGETINARKVFDRMP----ERNVVSW 106
Query: 199 NSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAI 258
+ ISGY N Y +A +F + R G+ FT+GSVL AC + L +G +IH
Sbjct: 107 TAQISGYAKNGHYQDALLVFSQM-GRAGVRANQFTYGSVLRACTGLRCLERGMQIHGCIQ 165
Query: 259 ALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQ 318
+ FV ALV+++ + ++ A+ F+ + + + G+ + ++ +
Sbjct: 166 KNRFIGNLFVQSALVDLHSKCGNMEDARYLFETMSERDVVSWNAVIGGYAAQDFNDDSFR 225
Query: 319 LFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYA 378
+F M+ +TPD +T+G +L A S + + Q+H I+ G+ S + + +L+D YA
Sbjct: 226 MFYSMMGEGVTPDCFTLGSVLKASSRANNLIKVCQIHGIIIQLGFGSHIDLNGSLIDAYA 285
Query: 379 KCGSLKHARLAYKRISTPDLVSQNAMLTAYAMH-GHGKEGIAHFRRILASGFRPDHISFL 437
K +K A YK + D++S A++T YA + +E + F+ + D ++F
Sbjct: 286 KSEGMKSASALYKSMLKKDVISFTAIMTGYARKCSYSREALDLFKDMQHIFMEIDDVTFC 345
Query: 438 SALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEA----YEFIKK 493
+ L+ C S+ G + L Y + +VD+ +++GE+ +A YE +K
Sbjct: 346 TMLNVCADIASLSIGRQIHALAIKYKPSYDVATGNALVDMYAKSGEIEDATRAFYEMKEK 405
Query: 494 IPMAPDSVMWGALLGGCVSHGNLEFGQ--IAADRLIELEPNNTGNYVMLANLFA 545
+ + W +L+ G HG +G IA + +E E + L+ LFA
Sbjct: 406 -----NVISWTSLITGYGKHG---YGHEAIALYKKMEYEGLKPNDITFLSLLFA 451
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 111/430 (25%), Positives = 182/430 (42%), Gaps = 78/430 (18%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
++ KCG+++DA+ +F+ M ERD VSWN
Sbjct: 182 LHSKCGNMEDARYLFETMSERDVVSWN--------------------------------- 208
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
AVIGG+ +++++ M + M EG+ P+ TL SVL A +R L + HG I
Sbjct: 209 ---AVIGGYAAQDFNDDSFRMFYSMMGEGVTPDCFTLGSVLKASSRANNLIKVCQIHGII 265
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA-EA 179
+ GF S+ + L+D Y + M SA ++ K+ +S I+ GY + + EA
Sbjct: 266 IQLGFGSHIDLNGSLIDAYAKSEGMKSASALYKSMLKKDVISFTAIMTGYARKCSYSREA 325
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
+LF M+H+ +E TF ++L
Sbjct: 326 LDLFKDMQHI------------------------------------FMEIDDVTFCTMLN 349
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
CAD+ SL G++IHALAI D G ALV+MY + ++ A AF E++ +
Sbjct: 350 VCADIASLSIGRQIHALAIKYKPSYDVATGNALVDMYAKSGEIEDATRAFYEMKEKNVIS 409
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
G+ + Y A+ L+ +M L P+ T +L ACS G + I
Sbjct: 410 WTSLITGYGKHGYGHEAIALYKKMEYEGLKPNDITFLSLLFACSHSGLTGEGWECFNNMI 469
Query: 360 -RCGYDSDVHIGTALVDMYAKCGSLKHA-RLAYKRISTPDLVSQNAMLTAYAMHGH---G 414
+ + ++D++A+ G L+ A + K P+ A+L A +++GH G
Sbjct: 470 TKYNILPRAEHYSCMIDLFARGGQLEEAYNMICKMNIKPNSSLWGAILGACSIYGHMSLG 529
Query: 415 KEGIAHFRRI 424
+ H R+
Sbjct: 530 EVAATHLLRM 539
>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 741
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 190/555 (34%), Positives = 307/555 (55%), Gaps = 18/555 (3%)
Query: 55 ETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGK 114
+ PNL+ W+ + G + A+ + M + GL PN+ T VL +CA+ + G+
Sbjct: 95 QEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQ 154
Query: 115 EFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
+ HG++ + G + +V L+ +Y + G + A K+F K ++ VS +I GY G
Sbjct: 155 QIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRG 214
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTF 234
+ A++LFD++ + ++SWN+MISGY + Y EA +F+D+ M+ + P T
Sbjct: 215 YIENAQKLFDEIP----VKDVVSWNAMISGYAETGNYKEALELFKDM-MKTNVRPDESTM 269
Query: 235 GSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAA-----QMAF 289
+V+ ACA S+ G+++H G S+ + AL+++Y + +L A ++ +
Sbjct: 270 VTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPY 329
Query: 290 DEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATME 349
++ + L+G N+Y A+ LF EML TP+ T+ IL AC+ L ++
Sbjct: 330 KDVISWNTLIGGYTH----MNLYK-EALLLFQEMLRSGETPNDVTMLSILPACAHLGAID 384
Query: 350 RGKQVHAYAIR--CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTA 407
G+ +H Y + G + + T+L+DMYAKCG ++ A + I L S NAM+
Sbjct: 385 IGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFG 444
Query: 408 YAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKP 466
+AMHG F R+ G +PD I+F+ LSAC H+G + G F M Y + P
Sbjct: 445 FAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTP 504
Query: 467 SLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRL 526
L+HY CM+DLL +G EA E I + M PD V+W +LL C HGN+E G+ A+ L
Sbjct: 505 KLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENL 564
Query: 527 IELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRAS 586
I++EP N G+YV+L+N++A AGRW+++A+TR + D+ M K PGCS IE +H+F
Sbjct: 565 IKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIG 624
Query: 587 DRSHDRSEEIYTIID 601
D+ H R+ EIY +++
Sbjct: 625 DKFHPRNREIYGMLE 639
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 120/441 (27%), Positives = 202/441 (45%), Gaps = 85/441 (19%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETP--N 58
MY + G L+DA KVF P RD VS+ +++ A+ G + E L +E P +
Sbjct: 178 MYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYI-------ENAQKLFDEIPVKD 230
Query: 59 LVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHG 118
+VSW+A+I G+ + G +EA+ + M + P+ T+ +V+ ACA+ + LG++ H
Sbjct: 231 VVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHL 290
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
+I +GF SN +VN L+D+Y +CG++ +A +F + K+ +S NT+I GY
Sbjct: 291 WIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGY-------- 342
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
H+ +LY EA +F+++L R G P T S+L
Sbjct: 343 --------THM-------------------NLYKEALLLFQEML-RSGETPNDVTMLSIL 374
Query: 239 IACADMNSLRKGKEIHALAIAL--GLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
ACA + ++ G+ IH G+ + + + +L++MY + D+ AA F+ I
Sbjct: 375 PACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI---- 430
Query: 297 NLLGKMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSAC 342
++ +WNAM LFS M + + PD T +LSAC
Sbjct: 431 ----------LHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSAC 480
Query: 343 SSLATMERGKQV-----HAYAIRCGYDSDVHIGTALVDMYAKCGSLK-HARLAYKRISTP 396
S ++ G+ + Y + + H G ++D+ G K + P
Sbjct: 481 SHSGMLDLGRHIFRTMTQDYKMTPKLE---HYG-CMIDLLGHSGLFKEAEEMINMMEMEP 536
Query: 397 DLVSQNAMLTAYAMHGHGKEG 417
D V ++L A MHG+ + G
Sbjct: 537 DGVIWCSLLKACKMHGNVELG 557
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 83/191 (43%), Gaps = 4/191 (2%)
Query: 339 LSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVD---MYAKCGSLKHARLAYKRIST 395
LS + T++ + +HA I+ G + + + L++ + L +A +K I
Sbjct: 37 LSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQE 96
Query: 396 PDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEF 455
P+L+ N M +A+ + + +++ G P+ +F L +C + + K G +
Sbjct: 97 PNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQI 156
Query: 456 FDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
+ L +T ++ + + G L +A++ K P D V + AL+ G S G
Sbjct: 157 HGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHR-DVVSYTALIKGYASRGY 215
Query: 516 LEFGQIAADRL 526
+E Q D +
Sbjct: 216 IENAQKLFDEI 226
>gi|296088174|emb|CBI35666.3| unnamed protein product [Vitis vinifera]
Length = 762
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 172/545 (31%), Positives = 287/545 (52%), Gaps = 37/545 (6%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
NLVSW VI + +NG E+AI + MQA G+ PN+ S+L +C L LGK+ H
Sbjct: 152 NLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQIH 211
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
++ R +N V + ++Y RCG + A +F +N V+
Sbjct: 212 SHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVT--------------- 256
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
W ++ GY + A +F + M +G+E F F V
Sbjct: 257 --------------------WTGLMVGYTQAKKLEVALELFARMAM-EGVELDEFVFSIV 295
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
L C + G++IH+ + LG +S+ VG LV+ Y + D+ +A +F I +
Sbjct: 296 LKVCCGLEDWDMGRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPND 355
Query: 298 LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAY 357
+ GF + + +++F+ + S + + + + AC++ A + G Q H
Sbjct: 356 VSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGD 415
Query: 358 AIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEG 417
AI+ G S ++ +A+V MY+KCG L +AR A++ I PD V+ A+++ YA HG+ E
Sbjct: 416 AIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEA 475
Query: 418 IAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVD 476
+ FRR+ + G RP+ ++F++ L+AC H+G + ++ M+ Y VKP++ HY CM+D
Sbjct: 476 LGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMID 535
Query: 477 LLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGN 536
SRAG L EA E I ++P PD++ W +LLGGC +H +L+ G+IAA+ L L+P +T
Sbjct: 536 TYSRAGLLQEALELINRMPFEPDAMSWKSLLGGCWAHCDLKLGKIAAENLFRLDPGDTAG 595
Query: 537 YVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEI 596
Y++L NL++ G+W + R+ M +R + K CSWI + ++H+F DR H ++E I
Sbjct: 596 YILLFNLYSAFGKWEEAGHVRKLMAERELKKEVSCSWISVKGQVHRFVVGDRHHPQTEAI 655
Query: 597 YTIID 601
Y+ ++
Sbjct: 656 YSKLE 660
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 120/454 (26%), Positives = 212/454 (46%), Gaps = 51/454 (11%)
Query: 69 FTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSN 128
++ G +EA L M + + + AC +L+ L+ G+ H + R + N
Sbjct: 62 LSKQGKLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRT--VKN 119
Query: 129 PFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEH 188
P +G ++ N ++ YC+ G+ + +++FD+M
Sbjct: 120 P---SGSIE--------------------------NCLLRMYCDCGSCIDVQKVFDEM-- 148
Query: 189 LGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLR 248
+ + ++SW +IS Y N ++A +F D+ GI P S + S+L +C + L
Sbjct: 149 --LMKNLVSWVIVISAYAKNGELEKAIRLFSDM-QASGIRPNSAVYMSLLQSCLGPSFLE 205
Query: 249 KGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFD--EIENIENLLGKMKEDG 306
GK+IH+ I L ++ V A+ MY R L A++ FD + +N G M G
Sbjct: 206 LGKQIHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMV--G 263
Query: 307 FEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSD 366
+ A++LF+ M + D + I+L C L + G+Q+H++ ++ G +S+
Sbjct: 264 YTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCGLEDWDMGRQIHSHIVKLGAESE 323
Query: 367 VHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILA 426
V +GT LVD Y KCG ++ A ++ RIS P+ VS +A+++ ++ G ++ I F + +
Sbjct: 324 VSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRS 383
Query: 427 SGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYD-VKPSLKHY----TCMVDLLSRA 481
G + + S AC ++ GS+ A+ D +K L Y + MV + S+
Sbjct: 384 EGVVLNSFIYTSVFQACAAQANLNMGSQ-----AHGDAIKRGLVSYLYGESAMVTMYSKC 438
Query: 482 GELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
G L A + I PD+V W A++ G HGN
Sbjct: 439 GRLDYARRAFESID-EPDAVAWTAIISGYAYHGN 471
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 157/365 (43%), Gaps = 38/365 (10%)
Query: 55 ETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGK 114
+ N V+W+ ++ G+TQ E A+ + RM EG+E + S VL C L+ +G+
Sbjct: 250 DAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCGLEDWDMGR 309
Query: 115 EFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
+ H +I + G S V LVD Y +CGD+ SA + F + S N+VS + +I G+ ++G
Sbjct: 310 QIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSG 369
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTF 234
+ + ++F L +G+ SF +
Sbjct: 370 RLEDCIKIFTS------------------------------------LRSEGVVLNSFIY 393
Query: 235 GSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIEN 294
SV ACA +L G + H AI GL S + A+V MY + L A+ AF+ I+
Sbjct: 394 TSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDE 453
Query: 295 IENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV 354
+ + G+ + A+ F M S + P+ T +L+ACS + KQ
Sbjct: 454 PDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQY 513
Query: 355 HAYAIR-CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNAMLTAYAMHG 412
R G + ++D Y++ G L+ A R+ PD +S ++L H
Sbjct: 514 LGSMSRDYGVKPTIDHYDCMIDTYSRAGLLQEALELINRMPFEPDAMSWKSLLGGCWAHC 573
Query: 413 HGKEG 417
K G
Sbjct: 574 DLKLG 578
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 127/292 (43%), Gaps = 3/292 (1%)
Query: 227 IEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQ 286
+ T ++ + AC + SL G+ IH + L+ MYC + Q
Sbjct: 83 VSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVKNPSGSIENCLLRMYCDCGSCIDVQ 142
Query: 287 MAFDEIENIENLLG-KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSL 345
FDE+ ++NL+ + + N A++LFS+M + + P+ +L +C
Sbjct: 143 KVFDEML-MKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNSAVYMSLLQSCLGP 201
Query: 346 ATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAML 405
+ +E GKQ+H++ IR ++++ + TA+ +MY +CG L+ A+L + + + V+ ++
Sbjct: 202 SFLELGKQIHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLM 261
Query: 406 TAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVK 465
Y + + F R+ G D F L C G + + +
Sbjct: 262 VGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCGLEDWDMGRQIHSHIVKLGAE 321
Query: 466 PSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
+ T +VD + G++ AY +I P+ V W AL+ G G LE
Sbjct: 322 SEVSVGTPLVDFYVKCGDIESAYRSFGRIS-EPNDVSWSALISGFSQSGRLE 372
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 94/218 (43%), Gaps = 12/218 (5%)
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
GK+KE A EM D++ ++ + AC L ++ G+ +H
Sbjct: 66 GKLKE-----------AHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLR 114
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
R + I L+ MY CGS + + + +LVS +++AYA +G ++ I
Sbjct: 115 RTVKNPSGSIENCLLRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIR 174
Query: 420 HFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLS 479
F + ASG RP+ ++S L +C+ ++ G + + + ++ T + ++
Sbjct: 175 LFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQIHSHVIRAQLNANITVETAICNMYV 234
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
R G L E + + A ++V W L+ G LE
Sbjct: 235 RCGWL-EGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLE 271
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 89/209 (42%), Gaps = 48/209 (22%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVV------------------------------ 30
MY KCG LD A++ F+ + E D V+W +++
Sbjct: 434 MYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVT 493
Query: 31 -----TACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRM 85
TAC+ +GLV EA + L MS P + + +I +++ G +EA+ ++ RM
Sbjct: 494 FIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLQEALELINRM 553
Query: 86 QAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNG---LVDVYRRC 142
EP+A + S+L C L LGK N F +P G L ++Y
Sbjct: 554 P---FEPDAMSWKSLLGGCWAHCDLKLGK----IAAENLFRLDPGDTAGYILLFNLYSAF 606
Query: 143 GDMLSA---LKIFSKFSIKNEVSCNTIIV 168
G A K+ ++ +K EVSC+ I V
Sbjct: 607 GKWEEAGHVRKLMAERELKKEVSCSWISV 635
>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1004
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 178/566 (31%), Positives = 300/566 (53%), Gaps = 42/566 (7%)
Query: 37 GLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNART 96
GL ++A+ + + + P++V WSA+I Q G EE+I + M+ PN T
Sbjct: 363 GLAIDAIGVFKTI-----KKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYT 417
Query: 97 LSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFS 156
+ S+L A L G+ H + + GF ++ V N LV +Y +
Sbjct: 418 ICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMK--------------- 462
Query: 157 IKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFS 216
NG V + +L++ M V R +ISWN+ +SG D +YD +
Sbjct: 463 ----------------NGCVHDGTKLYESM----VDRDLISWNAYLSGLHDCGMYDRPLT 502
Query: 217 MFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMY 276
+F +L +G P +TF S+L +C+ + + G+++HA I L + FV AL++MY
Sbjct: 503 IFYHML-EEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMY 561
Query: 277 CRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVG 336
+ L A +AF+ + + + + A+ F +M + P+ +T+
Sbjct: 562 AKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLA 621
Query: 337 IILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTP 396
LS CSSLA++E G+Q+H+ + G+ SD+ +G+ALVDMYAKCG ++ A ++ +
Sbjct: 622 GCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRR 681
Query: 397 DLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFF 456
D ++ N ++ YA +G G + + FR +L G PD ++F LSAC H G ++ G E F
Sbjct: 682 DTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHF 741
Query: 457 DLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
+ M + + P++ H CMVD+L R G+ E +FI+K+ ++ ++++W +LG H N
Sbjct: 742 NSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNALIWETVLGASKMHNN 801
Query: 516 LEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIE 575
L G+ AA++L EL+P +Y++L+N+FA GRW D+ R R M + + K PGCSW+E
Sbjct: 802 LVLGEKAANKLFELQPEEESSYILLSNIFATEGRWDDVKRVRSLMSSKGVKKEPGCSWVE 861
Query: 576 DRDEIHKFRASDRSHDRSEEIYTIID 601
++H F + D SH + +EI+ +D
Sbjct: 862 ANGQVHTFVSHDYSHPQIQEIHLKLD 887
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 123/452 (27%), Positives = 203/452 (44%), Gaps = 77/452 (17%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KC A+ V MP+RD VSW +++ GLV E
Sbjct: 156 VYAKCRYSAYARLVLAKMPDRDVVSWTALI-----QGLVAE------------------- 191
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
G+ ++I + MQ EG+ PN TL++ L AC+ L LGK+ H
Sbjct: 192 ------------GFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQA 239
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G + + FV + LVD+Y +CG++ A K+F +N+V+ N ++ GY + G+V
Sbjct: 240 FKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVL 299
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+LF M L V+ FT +VL
Sbjct: 300 KLFCSMMELDVK------------------------------------CNEFTLTTVLKG 323
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA+ +L++G+ IH+L I G + + F+G LV+MY + + A F I+ + ++
Sbjct: 324 CANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVW 383
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
+ + +++LF M D P+ YT+ +LSA ++ ++ G+ +HA +
Sbjct: 384 SALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWK 443
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
G+++DV + ALV MY K G + Y+ + DL+S NA L+ G +
Sbjct: 444 YGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTI 503
Query: 421 FRRILASGFRPDHISFLSALSAC-----VHAG 447
F +L GF P+ +F+S L +C VH G
Sbjct: 504 FYHMLEEGFIPNMYTFISILGSCSCLFDVHYG 535
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 106/412 (25%), Positives = 193/412 (46%), Gaps = 37/412 (8%)
Query: 98 SSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSI 157
SS+L CA + L + K HG I ++ + + LV+VY +C ++S
Sbjct: 116 SSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKC-----------RYS- 163
Query: 158 KNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSM 217
A AR + +M R ++SW ++I G V +++ +
Sbjct: 164 -------------------AYARLVLAKMP----DRDVVSWTALIQGLVAEGFANDSIYL 200
Query: 218 FRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYC 277
F+++ +GI P FT + L AC+ +L GK++HA A LGL D FVG ALV++Y
Sbjct: 201 FQEM-QNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYA 259
Query: 278 RYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGI 337
+ ++ A F + ++ + +G+ ++LF M+ LD+ + +T+
Sbjct: 260 KCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTT 319
Query: 338 ILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPD 397
+L C++ +++G+ +H+ I+CGY+ + IG LVDMY+KCG A +K I PD
Sbjct: 320 VLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPD 379
Query: 398 LVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFD 457
+V +A++T G +E I F + P+ + S LSA + G+++ G
Sbjct: 380 IVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHA 439
Query: 458 LMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
+ Y + + +V + + G + + + + + + D + W A L G
Sbjct: 440 CVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESM-VDRDLISWNAYLSG 490
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 101/393 (25%), Positives = 168/393 (42%), Gaps = 46/393 (11%)
Query: 14 VFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNG 73
V+K E D N++VT NG V + + E M D L+SW+A + G G
Sbjct: 441 VWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRD-----LISWNAYLSGLHDCG 495
Query: 74 YDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVN 133
+ + + + M EG PN T S+L +C+ L + G++ H +I +N N FV
Sbjct: 496 MYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCT 555
Query: 134 GLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQR 193
L+D+Y +C + A F++ S+++ + II Y + +A F QM+
Sbjct: 556 ALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQ------ 609
Query: 194 GIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEI 253
++G++P FT L C+ + SL G+++
Sbjct: 610 ------------------------------QEGVKPNEFTLAGCLSGCSSLASLEGGQQL 639
Query: 254 HALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYT 313
H++ G SD FVG ALV+MY + + A+ F+ + + + G+ N
Sbjct: 640 HSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQG 699
Query: 314 WNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR-CGYDSDVHIGTA 372
A+ F ML ++PD T ILSACS +E GK+ R G V
Sbjct: 700 NKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCAC 759
Query: 373 LVDMYAKCGSLKHARLAYKRISTPDLVSQNAML 405
+VD+ + G +++ +SQNA++
Sbjct: 760 MVDILGRVGKFDELEDFIQKMQ----LSQNALI 788
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 136/279 (48%), Gaps = 11/279 (3%)
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMY--CRYQ---DLVAAQMA 288
+ S+L CA SL K IH L + + D+ + +LV +Y CRY LV A+M
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMP 174
Query: 289 FDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATM 348
++ + L+ + +GF +++ LF EM + + P+ +T+ L ACS +
Sbjct: 175 DRDVVSWTALIQGLVAEGFAN-----DSIYLFQEMQNEGIMPNEFTLATGLKACSLCMAL 229
Query: 349 ERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAY 408
+ GKQ+HA A + G D+ +G+ALVD+YAKCG ++ A + + + V+ N +L Y
Sbjct: 230 DLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGY 289
Query: 409 AMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSL 468
A G + F ++ + + + + L C ++ ++K G L+ + +
Sbjct: 290 AQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNE 349
Query: 469 KHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALL 507
+VD+ S+ G +A K I PD V+W AL+
Sbjct: 350 FIGCGLVDMYSKCGLAIDAIGVFKTIK-KPDIVVWSALI 387
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 81/179 (45%), Gaps = 1/179 (0%)
Query: 338 ILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPD 397
+L C+S ++ K +H ++ + D H+ +LV++YAKC +ARL ++ D
Sbjct: 118 MLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDRD 177
Query: 398 LVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFD 457
+VS A++ G + I F+ + G P+ + + L AC ++ G +
Sbjct: 178 VVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHA 237
Query: 458 LMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNL 516
+ L + +VDL ++ GE+ A + +P D V W LL G G++
Sbjct: 238 QAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQND-VTWNVLLNGYAQRGDV 295
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/197 (20%), Positives = 89/197 (45%), Gaps = 8/197 (4%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG +++A+ +F+ + RD ++WN+++ A NG +AL RM + +P+ V
Sbjct: 661 MYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAF-RMMLDEGISPDGV 719
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
+++ ++ + G EE M + G+ P + ++ R+ K E +
Sbjct: 720 TFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFD---ELEDF 776
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSK-FSIKNEVSCNTIIVG--YCENGNV 176
I + N + ++ + +++ K +K F ++ E + I++ + G
Sbjct: 777 IQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQPEEESSYILLSNIFATEGRW 836
Query: 177 AEARELFDQMEHLGVQR 193
+ + + M GV++
Sbjct: 837 DDVKRVRSLMSSKGVKK 853
>gi|449438554|ref|XP_004137053.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
Length = 611
Score = 331 bits (849), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 179/567 (31%), Positives = 302/567 (53%), Gaps = 39/567 (6%)
Query: 69 FTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFM-S 127
+ G EA+ L R+ G+ +L CA+ + GK H ++ GF
Sbjct: 37 LSSQGRLPEALSYLDRLAQRGVRLPTGIFVDLLRLCAKAKYFKGGKCVHLHLKHTGFKRP 96
Query: 128 NPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQME 187
V N L+ +Y CG + A K+F K S++N S N ++ GY + G+V AR+LFD+M
Sbjct: 97 TTIVANHLIGMYFECGRDVEARKVFDKMSVRNLYSWNHMLAGYAKLGDVNNARKLFDRM- 155
Query: 188 HLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSL 247
+++ ++SWN+++ Y ++EA ++RD D + +F+F VLI C + L
Sbjct: 156 ---MEKDVVSWNTIVLAYAKQGCFNEAIGLYRDFRRLD-MGFNAFSFAGVLILCVKLKEL 211
Query: 248 RKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI--------------- 292
+ K++H + G S+ + ++V+ Y + ++ A+ FDE+
Sbjct: 212 QLAKQVHGQVLVAGFLSNLVLSSSIVDAYAKCGEMRCARTLFDEMLVKDIHAWTTIVSGY 271
Query: 293 ------ENIENLLGKMKE----------DGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVG 336
+ L +M E G+ N A+ F++M+ + P+ YT
Sbjct: 272 AKWGDMNSASELFHQMPEKNPVSWSALISGYARNSLGHEALDYFTKMMKFGINPEQYTFS 331
Query: 337 IILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRI-ST 395
L AC+S+A ++ GKQVH Y IR + + + ++L+DMY+KCG L+ + + + +
Sbjct: 332 SCLCACASIAALKHGKQVHGYLIRTYFRCNTIVVSSLIDMYSKCGMLEASCCVFHLMGNK 391
Query: 396 PDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEF 455
D+V N M++A A +GHG++ + F ++ SG +PD I+F+ LSAC H+G ++ G F
Sbjct: 392 QDVVVWNTMISALAQNGHGEKAMQMFNDMVESGLKPDRITFIVILSACSHSGLVQEGLRF 451
Query: 456 FDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
F M Y + V P +HY+C++DLL RAG E ++ + PD +W ALLG C H
Sbjct: 452 FKAMTYDHGVFPDQEHYSCLIDLLGRAGCFVELVNELENMSCKPDDRVWSALLGVCRIHN 511
Query: 515 NLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWI 574
N+E G+ A+R+IEL+P ++ YV LA+L+A+ G+W + + R+ M ++ + K G SWI
Sbjct: 512 NIELGRKVAERVIELKPQSSAAYVSLASLYAFLGKWESVEKVRELMDEKFIRKERGISWI 571
Query: 575 EDRDEIHKFRASDRSHDRSEEIYTIID 601
+ ++ H F ASDR H EEIY +++
Sbjct: 572 DVGNKTHSFIASDRLHPLKEEIYLLLE 598
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 123/383 (32%), Positives = 201/383 (52%), Gaps = 12/383 (3%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +CG +A+KVF M R+ SWN ++ A G V A + +RM D +V
Sbjct: 107 MYFECGRDVEARKVFDKMSVRNLYSWNHMLAGYAKLGDVNNARKLFDRMMEKD-----VV 161
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ ++ + + G EAIG+ + + NA + + VL C +L++L L K+ HG +
Sbjct: 162 SWNTIVLAYAKQGCFNEAIGLYRDFRRLDMGFNAFSFAGVLILCVKLKELQLAKQVHGQV 221
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
GF+SN + + +VD Y +CG+M A +F + +K+ + TI+ GY + G++ A
Sbjct: 222 LVAGFLSNLVLSSSIVDAYAKCGEMRCARTLFDEMLVKDIHAWTTIVSGYAKWGDMNSAS 281
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
ELF QM ++ +SW+++ISGY NSL EA F +M+ GI P +TF S L A
Sbjct: 282 ELFHQMP----EKNPVSWSALISGYARNSLGHEALDYFTK-MMKFGINPEQYTFSSCLCA 336
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN-LL 299
CA + +L+ GK++H I + +T V +L++MY + L A+ F + N ++ ++
Sbjct: 337 CASIAALKHGKQVHGYLIRTYFRCNTIVVSSLIDMYSKCGMLEASCCVFHLMGNKQDVVV 396
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG-KQVHAYA 358
N + AMQ+F++M+ L PD T +ILSACS ++ G + A
Sbjct: 397 WNTMISALAQNGHGEKAMQMFNDMVESGLKPDRITFIVILSACSHSGLVQEGLRFFKAMT 456
Query: 359 IRCGYDSDVHIGTALVDMYAKCG 381
G D + L+D+ + G
Sbjct: 457 YDHGVFPDQEHYSCLIDLLGRAG 479
>gi|224137432|ref|XP_002322556.1| predicted protein [Populus trichocarpa]
gi|222867186|gb|EEF04317.1| predicted protein [Populus trichocarpa]
Length = 702
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 203/652 (31%), Positives = 322/652 (49%), Gaps = 86/652 (13%)
Query: 6 GSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAV 65
G D+A K+F +MP RD SW ++T NG V +A E + + + + W+A+
Sbjct: 51 GKFDEAYKLFVIMPRRDLFSWTLMITCYTRNGEVEKARELFDSLPC--SYRKGVACWNAM 108
Query: 66 IGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGF 125
I G+ + G EA + M + N + +S+L + +K+ LG EF +
Sbjct: 109 ISGYVKKGRVNEAKRLFDEMPVK----NLISWNSMLAGYTQNRKMRLGLEFFNEMDERDV 164
Query: 126 MSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQ 185
+S +V+G + V GD+ SA K F + N VS T++ G+ NGN+ E+R LFDQ
Sbjct: 165 VSWNLMVDGFIQV----GDLDSAWKFFQETQKPNVVSWVTMLSGFARNGNILESRRLFDQ 220
Query: 186 MEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMN 245
M R I+SWN+MIS YV DEA +F ++ RD + T+ G V I
Sbjct: 221 MP----SRNIVSWNAMISAYVQRCEIDEASRLFEEMPERDSVSWTTMINGYVRIG----- 271
Query: 246 SLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKED 305
L + +E+ + + T A++ Y + + A+ FDEI + +
Sbjct: 272 KLDEARELLNEMPYRNIGAQT----AMISGYIQCNKVDEARRFFDEIGTWDVVCWNAMIA 327
Query: 306 GF-----------------EPNVYTWNAM--------------QLFSEMLSLDLT----- 329
G+ ++ TWN M ++F EM DL
Sbjct: 328 GYAHHGRINEALCLSKRMVNKDMVTWNTMISCYAQVGQMDRAVKIFEEMGERDLVSWNSL 387
Query: 330 --------------------------PDIYTVGIILSACSSLATMERGKQVHAYAIRCGY 363
PD + LS+C+++A ++ G Q+H ++ GY
Sbjct: 388 IAGFMLNGQNLDALKSFALMGHEGKKPDQLSFACGLSSCATIAALQVGNQLHQVVVKGGY 447
Query: 364 DSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRR 423
+ + + AL+ MYAKCG + A L + I D++S N+++ YA++G+GKE + F
Sbjct: 448 LNYLVVNNALITMYAKCGRILEAGLVFNGICHADVISWNSLIGGYAINGYGKEALKLFEE 507
Query: 424 ILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLLSRAG 482
+ + G PD ++F+ LSAC HAG + G + F M+ Y ++P +HY CMVDLL R G
Sbjct: 508 MASEGMAPDEVTFIGILSACNHAGMVDHGLKLFKCMSKVYAIEPLAEHYACMVDLLGRVG 567
Query: 483 ELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLAN 542
L EA+E ++ + + + +WGALLG C +HGNLE G++AA +L E EP+ T NYV+L+N
Sbjct: 568 RLDEAFEIVRGMKVKATAGVWGALLGACRAHGNLELGRLAAHKLSEFEPHKTSNYVLLSN 627
Query: 543 LFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSE 594
+ A A RW+++ R M K PGCSW+E R+++H F + D + R +
Sbjct: 628 IHAEANRWNEVQEVRMLMNASSTVKEPGCSWVEVRNQVHGFLSDDSTRSRPD 679
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/378 (23%), Positives = 168/378 (44%), Gaps = 43/378 (11%)
Query: 158 KNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSM 217
KN V+ N++I Y +NG + AR LFD+M +R ++SWN+M+SGY+ N +DEA+ +
Sbjct: 4 KNTVTYNSMISVYAKNGRINAARNLFDKMP----RRNLVSWNTMVSGYLHNGKFDEAYKL 59
Query: 218 FRDLLMRDGIEPTSFTFGSVLIACADMN-SLRKGKEIHALAIALGLQSDTFVGGALVEMY 276
F + RD T ++I C N + K +E+ ++ + A++ Y
Sbjct: 60 FVIMPRRDLFSWT------LMITCYTRNGEVEKARELFD-SLPCSYRKGVACWNAMISGY 112
Query: 277 CRYQDLVAAQMAFDEIENIENLLG-KMKEDGFEPNVYTWNAMQLFSEM-----LSLDLTP 330
+ + A+ FDE+ ++NL+ G+ N ++ F+EM +S +L
Sbjct: 113 VKKGRVNEAKRLFDEMP-VKNLISWNSMLAGYTQNRKMRLGLEFFNEMDERDVVSWNLMV 171
Query: 331 DIY-TVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLA 389
D + VG + SA ++ V + G +A+ G++ +R
Sbjct: 172 DGFIQVGDLDSAWKFFQETQKPNVVSWVTMLSG--------------FARNGNILESRRL 217
Query: 390 YKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSI 449
+ ++ + ++VS NAM++AY E R+ D +S+ + ++ V G +
Sbjct: 218 FDQMPSRNIVSWNAMISAYVQRCEIDEA----SRLFEEMPERDSVSWTTMINGYVRIGKL 273
Query: 450 KTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
E + M Y ++ T M+ + ++ EA F +I D V W A++ G
Sbjct: 274 DEARELLNEMPYRNIGAQ----TAMISGYIQCNKVDEARRFFDEIG-TWDVVCWNAMIAG 328
Query: 510 CVSHGNLEFGQIAADRLI 527
HG + + R++
Sbjct: 329 YAHHGRINEALCLSKRMV 346
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 129/297 (43%), Gaps = 43/297 (14%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y + G +D A K+F+ M ERD VSWNS++ NG L+AL+ M
Sbjct: 360 YAQVGQMDRAVKIFEEMGERDLVSWNSLIAGFMLNGQNLDALKSFALMGH---------- 409
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
EG +P+ + + L +CA + L +G + H +
Sbjct: 410 --------------------------EGKKPDQLSFACGLSSCATIAALQVGNQLHQVVV 443
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
+ G+++ V N L+ +Y +CG +L A +F+ + +S N++I GY NG EA +
Sbjct: 444 KGGYLNYLVVNNALITMYAKCGRILEAGLVFNGICHADVISWNSLIGGYAINGYGKEALK 503
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
LF++M G+ +++ ++S + D +F+ + IEP + + AC
Sbjct: 504 LFEEMASEGMAPDEVTFIGILSACNHAGMVDHGLKLFKCMSKVYAIEPLAEHY-----AC 558
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVG--GALVEMYCRYQDLVAAQMAFDEIENIE 296
R G+ A I G++ G GAL+ + +L ++A ++ E
Sbjct: 559 MVDLLGRVGRLDEAFEIVRGMKVKATAGVWGALLGACRAHGNLELGRLAAHKLSEFE 615
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/394 (22%), Positives = 151/394 (38%), Gaps = 74/394 (18%)
Query: 128 NPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVG------------------ 169
N N ++ VY + G + +A +F K +N VS NT++ G
Sbjct: 5 NTVTYNSMISVYAKNGRINAARNLFDKMPRRNLVSWNTMVSGYLHNGKFDEAYKLFVIMP 64
Query: 170 -------------YCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFS 216
Y NG V +ARELFD + ++G+ WN+MISGYV +EA
Sbjct: 65 RRDLFSWTLMITCYTRNGEVEKARELFDSLP-CSYRKGVACWNAMISGYVKKGRVNEAKR 123
Query: 217 MFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMY 276
+F ++ +++ I ++ S+L +R G E + D +V+ +
Sbjct: 124 LFDEMPVKNLI-----SWNSMLAGYTQNRKMRLGLEFFNEMD----ERDVVSWNLMVDGF 174
Query: 277 CRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVG 336
+ DL +A F E + + GF N + +LF +M S ++ +
Sbjct: 175 IQVGDLDSAWKFFQETQKPNVVSWVTMLSGFARNGNILESRRLFDQMPSRNIVSWNAMIS 234
Query: 337 IILSACSS------LATMERGKQVHAYAIRCGYDSDVHIG-------------------- 370
+ C M V + GY V IG
Sbjct: 235 AYVQRCEIDEASRLFEEMPERDSVSWTTMINGY---VRIGKLDEARELLNEMPYRNIGAQ 291
Query: 371 TALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFR 430
TA++ Y +C + AR + I T D+V NAM+ YA HG E + +R++
Sbjct: 292 TAMISGYIQCNKVDEARRFFDEIGTWDVVCWNAMIAGYAHHGRINEALCLSKRMV----N 347
Query: 431 PDHISFLSALSACVHAGSIKTGSEFFDLMAYYDV 464
D +++ + +S G + + F+ M D+
Sbjct: 348 KDMVTWNTMISCYAQVGQMDRAVKIFEEMGERDL 381
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 2/111 (1%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG + +A VF + D +SWNS++ A NG EAL+ E M+S + P+ V
Sbjct: 460 MYAKCGRILEAGLVFNGICHADVISWNSLIGGYAINGYGKEALKLFEEMAS-EGMAPDEV 518
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRM-QAEGLEPNARTLSSVLPACARLQKL 110
++ ++ G + + + M + +EP A + ++ R+ +L
Sbjct: 519 TFIGILSACNHAGMVDHGLKLFKCMSKVYAIEPLAEHYACMVDLLGRVGRL 569
>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 723
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 188/600 (31%), Positives = 302/600 (50%), Gaps = 74/600 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGSL DA++VF + +R N+V
Sbjct: 91 MYAKCGSLTDARRVFDSIRDR------------------------------------NIV 114
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A+I F + EA M+ G +P+ T S+L A + L LG++ H I
Sbjct: 115 SWTAMIEAFVAGNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEI 174
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
G P V LV +Y +CGD +++AR
Sbjct: 175 VEAGLELEPRVGTSLVGMYAKCGD-------------------------------ISKAR 203
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+FD++ ++ +++W +I+GY D A + + + + + P TF S+L
Sbjct: 204 VIFDRLP----EKNVVTWTLLIAGYAQQGQVDVALELL-ETMQQAEVAPNKITFASILQG 258
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C +L GK++H I G + +V +L+ MYC+ L A+ F ++ + + +
Sbjct: 259 CTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRDVVTW 318
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G+ + A+ LF M + PD T +L++CSS A ++ GK++H +
Sbjct: 319 TAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVH 378
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAY-AMHGHGKEGIA 419
GY+ DV++ +ALV MYAKCGS+ A L + ++S ++V+ A++T A HG +E +
Sbjct: 379 AGYNLDVYLQSALVSMYAKCGSMDDASLVFNQMSERNVVAWTAIITGCCAQHGRCREALE 438
Query: 420 HFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLL 478
+F ++ G +PD ++F S LSAC H G ++ G + F M Y +KP ++HY+C VDLL
Sbjct: 439 YFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLL 498
Query: 479 SRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYV 538
RAG L EA I +P P +WGALL C H ++E G+ AA+ +++L+P++ G YV
Sbjct: 499 GRAGHLEEAENVILSMPFIPGPSVWGALLSACRVHSDVERGERAAENVLKLDPDDDGAYV 558
Query: 539 MLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYT 598
L++++A AGR+ D + RQ M+ R + K PG SWIE ++H F D+SH SE+IY
Sbjct: 559 ALSSIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIEVDGKVHVFHVEDKSHPESEQIYV 618
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 116/445 (26%), Positives = 208/445 (46%), Gaps = 38/445 (8%)
Query: 71 QNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPF 130
+ G +EA+G++ M +G + +L CARL+ L G+E H I ++G N +
Sbjct: 24 KTGRLKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRY 83
Query: 131 VVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLG 190
+ N L+ +Y +CG + A ++F +N
Sbjct: 84 LENTLLSMYAKCGSLTDARRVFDSIRDRN------------------------------- 112
Query: 191 VQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKG 250
I+SW +MI +V + EAF + + + G +P TF S+L A + L+ G
Sbjct: 113 ----IVSWTAMIEAFVAGNKNLEAFKCYETMKL-AGCKPDKVTFVSLLNAFTNPELLQLG 167
Query: 251 KEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPN 310
+++H + GL+ + VG +LV MY + D+ A++ FD + + + G+
Sbjct: 168 QKVHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQ 227
Query: 311 VYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIG 370
A++L M ++ P+ T IL C++ A +E GK+VH Y I+ GY ++ +
Sbjct: 228 GQVDVALELLETMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVV 287
Query: 371 TALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFR 430
+L+ MY KCG L+ AR + + D+V+ AM+T YA G E I FRR+ G +
Sbjct: 288 NSLITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIK 347
Query: 431 PDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEF 490
PD ++F S L++C ++ G + + + + +V + ++ G + +A
Sbjct: 348 PDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDASLV 407
Query: 491 IKKIPMAPDSVMWGALLGGCVS-HG 514
++ + V W A++ GC + HG
Sbjct: 408 FNQMS-ERNVVAWTAIITGCCAQHG 431
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 92/180 (51%), Gaps = 1/180 (0%)
Query: 338 ILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPD 397
+L C+ L ++E+G++VHA ++ G + ++ L+ MYAKCGSL AR + I +
Sbjct: 53 LLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDSIRDRN 112
Query: 398 LVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFD 457
+VS AM+ A+ E + + +G +PD ++F+S L+A + ++ G +
Sbjct: 113 IVSWTAMIEAFVAGNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHM 172
Query: 458 LMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
+ ++ + T +V + ++ G++ +A ++P + V W L+ G G ++
Sbjct: 173 EIVEAGLELEPRVGTSLVGMYAKCGDISKARVIFDRLP-EKNVVTWTLLIAGYAQQGQVD 231
>gi|218193985|gb|EEC76412.1| hypothetical protein OsI_14066 [Oryza sativa Indica Group]
Length = 628
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 170/504 (33%), Positives = 282/504 (55%), Gaps = 9/504 (1%)
Query: 94 ARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFS 153
AR S + AC L+ L ++ H + +G ++ F N L+ Y GD+ +A ++F
Sbjct: 44 ARLFSHLFRACRALRPL---RQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFE 100
Query: 154 KFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDE 213
+ +N +S N + GY +NG++ AR+LFD+M +R + +WN+M++G + +E
Sbjct: 101 RIPRRNVMSWNILFGGYIKNGDLGGARKLFDEMP----ERNVATWNAMVAGLTNLGFDEE 156
Query: 214 AFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALV 273
+ +F D+ R+G+ P F GSV CA + + G+++HA + GL D VG +L
Sbjct: 157 SLGLFLDM-RREGMHPDEFGLGSVSRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLA 215
Query: 274 EMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIY 333
MY R L + + ++ + G N + A++ F M S+ + D+
Sbjct: 216 HMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVV 275
Query: 334 TVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRI 393
T +S+CS LA + +G+Q+H ++ G D V + T LV MY++CG L + +
Sbjct: 276 TFVSAISSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGY 335
Query: 394 STPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGS 453
D +AM++AY HGHG++ I F++++ G P ++FL+ L AC H+G + G
Sbjct: 336 CGSDTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGM 395
Query: 454 EFFDLMA-YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVS 512
+ F+LM Y ++PS+KHYTC+VDLL R+G L EA I +P+ PD V+W LL C +
Sbjct: 396 DCFELMTKTYGIQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKT 455
Query: 513 HGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCS 572
N + + A R+IEL+P+++ +YV+L+N+ A + RW D++ R+ M+D + K PG S
Sbjct: 456 QKNFDMAERIAKRVIELDPHDSASYVLLSNIRATSRRWGDVSEVRKAMRDNNVRKEPGVS 515
Query: 573 WIEDRDEIHKFRASDRSHDRSEEI 596
W+E + IH+F D SH R +EI
Sbjct: 516 WVELKGHIHQFCTGDESHPRQKEI 539
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 107/408 (26%), Positives = 175/408 (42%), Gaps = 43/408 (10%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y G L A+++F+ +P R+ +SWN + NG + A + + M N+ +
Sbjct: 86 YADLGDLTAARELFERIPRRNVMSWNILFGGYIKNGDLGGARKLFDEMPE-----RNVAT 140
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W+A++ G T G+DEE++G+ M+ EG+ P+ L SV CA L+ + G++ H Y+
Sbjct: 141 WNAMVAGLTNLGFDEESLGLFLDMRREGMHPDEFGLGSVSRCCAGLRDVVTGRQVHAYVV 200
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
R+G + V + L +Y RCG + + + VSCNTII G +NG+ A E
Sbjct: 201 RSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALE 260
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
F M +GV ++ TF S + +C
Sbjct: 261 YFCMMRSVGVAADVV------------------------------------TFVSAISSC 284
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK 301
+D+ +L +G++IH + G+ V LV MY R L ++ F + L
Sbjct: 285 SDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLS 344
Query: 302 MKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRC 361
+ + + A++LF +M++ P T +L ACS E G +
Sbjct: 345 AMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKT 404
Query: 362 -GYDSDVHIGTALVDMYAKCGSLKHAR-LAYKRISTPDLVSQNAMLTA 407
G V T +VD+ + G L A L TPD V +L+A
Sbjct: 405 YGIQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSA 452
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 118/280 (42%), Gaps = 40/280 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +CG L + + V +M+P VS N+
Sbjct: 217 MYMRCGCLQEGEAVLRMLPSLSIVSCNT-------------------------------- 244
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+I G TQNG E A+ M++ G+ + T S + +C+ L L+ G++ HG +
Sbjct: 245 ----IIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQV 300
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G V+ LV +Y RCG + + ++F + + + +I Y +G+ +A
Sbjct: 301 MKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGFHGHGQKAI 360
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
ELF QM + G + +++ +++ + L +E F + GI+P+ + V+
Sbjct: 361 ELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGIQPSVKHYTCVVDL 420
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQ 280
L E AL +++ L D + L+ C+ Q
Sbjct: 421 LGRSGCL---DEAEALILSMPLTPDGVIWKTLLSA-CKTQ 456
>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 989
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 178/566 (31%), Positives = 300/566 (53%), Gaps = 42/566 (7%)
Query: 37 GLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNART 96
GL ++A+ + + + P++V WSA+I Q G EE+I + M+ PN T
Sbjct: 363 GLAIDAIGVFKTI-----KKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYT 417
Query: 97 LSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFS 156
+ S+L A L G+ H + + GF ++ V N LV +Y +
Sbjct: 418 ICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMK--------------- 462
Query: 157 IKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFS 216
NG V + +L++ M V R +ISWN+ +SG D +YD +
Sbjct: 463 ----------------NGCVHDGTKLYESM----VDRDLISWNAYLSGLHDCGMYDRPLT 502
Query: 217 MFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMY 276
+F +L +G P +TF S+L +C+ + + G+++HA I L + FV AL++MY
Sbjct: 503 IFYHML-EEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMY 561
Query: 277 CRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVG 336
+ L A +AF+ + + + + A+ F +M + P+ +T+
Sbjct: 562 AKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLA 621
Query: 337 IILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTP 396
LS CSSLA++E G+Q+H+ + G+ SD+ +G+ALVDMYAKCG ++ A ++ +
Sbjct: 622 GCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRR 681
Query: 397 DLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFF 456
D ++ N ++ YA +G G + + FR +L G PD ++F LSAC H G ++ G E F
Sbjct: 682 DTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHF 741
Query: 457 DLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
+ M + + P++ H CMVD+L R G+ E +FI+K+ ++ ++++W +LG H N
Sbjct: 742 NSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNALIWETVLGASKMHNN 801
Query: 516 LEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIE 575
L G+ AA++L EL+P +Y++L+N+FA GRW D+ R R M + + K PGCSW+E
Sbjct: 802 LVLGEKAANKLFELQPEEESSYILLSNIFATEGRWDDVKRVRSLMSSKGVKKEPGCSWVE 861
Query: 576 DRDEIHKFRASDRSHDRSEEIYTIID 601
++H F + D SH + +EI+ +D
Sbjct: 862 ANGQVHTFVSHDYSHPQIQEIHLKLD 887
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 123/452 (27%), Positives = 203/452 (44%), Gaps = 77/452 (17%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KC A+ V MP+RD VSW +++ GLV E
Sbjct: 156 VYAKCRYSAYARLVLAKMPDRDVVSWTALI-----QGLVAE------------------- 191
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
G+ ++I + MQ EG+ PN TL++ L AC+ L LGK+ H
Sbjct: 192 ------------GFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQA 239
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G + + FV + LVD+Y +CG++ A K+F +N+V+ N ++ GY + G+V
Sbjct: 240 FKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVL 299
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+LF M L V+ FT +VL
Sbjct: 300 KLFCSMMELDVK------------------------------------CNEFTLTTVLKG 323
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA+ +L++G+ IH+L I G + + F+G LV+MY + + A F I+ + ++
Sbjct: 324 CANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVW 383
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
+ + +++LF M D P+ YT+ +LSA ++ ++ G+ +HA +
Sbjct: 384 SALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWK 443
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
G+++DV + ALV MY K G + Y+ + DL+S NA L+ G +
Sbjct: 444 YGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTI 503
Query: 421 FRRILASGFRPDHISFLSALSAC-----VHAG 447
F +L GF P+ +F+S L +C VH G
Sbjct: 504 FYHMLEEGFIPNMYTFISILGSCSCLFDVHYG 535
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 106/412 (25%), Positives = 193/412 (46%), Gaps = 37/412 (8%)
Query: 98 SSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSI 157
SS+L CA + L + K HG I ++ + + LV+VY +C ++S
Sbjct: 116 SSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKC-----------RYS- 163
Query: 158 KNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSM 217
A AR + +M R ++SW ++I G V +++ +
Sbjct: 164 -------------------AYARLVLAKMP----DRDVVSWTALIQGLVAEGFANDSIYL 200
Query: 218 FRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYC 277
F+++ +GI P FT + L AC+ +L GK++HA A LGL D FVG ALV++Y
Sbjct: 201 FQEM-QNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYA 259
Query: 278 RYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGI 337
+ ++ A F + ++ + +G+ ++LF M+ LD+ + +T+
Sbjct: 260 KCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTT 319
Query: 338 ILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPD 397
+L C++ +++G+ +H+ I+CGY+ + IG LVDMY+KCG A +K I PD
Sbjct: 320 VLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPD 379
Query: 398 LVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFD 457
+V +A++T G +E I F + P+ + S LSA + G+++ G
Sbjct: 380 IVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHA 439
Query: 458 LMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
+ Y + + +V + + G + + + + + + D + W A L G
Sbjct: 440 CVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESM-VDRDLISWNAYLSG 490
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 101/393 (25%), Positives = 168/393 (42%), Gaps = 46/393 (11%)
Query: 14 VFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNG 73
V+K E D N++VT NG V + + E M D L+SW+A + G G
Sbjct: 441 VWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRD-----LISWNAYLSGLHDCG 495
Query: 74 YDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVN 133
+ + + + M EG PN T S+L +C+ L + G++ H +I +N N FV
Sbjct: 496 MYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCT 555
Query: 134 GLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQR 193
L+D+Y +C + A F++ S+++ + II Y + +A F QM+
Sbjct: 556 ALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQ------ 609
Query: 194 GIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEI 253
++G++P FT L C+ + SL G+++
Sbjct: 610 ------------------------------QEGVKPNEFTLAGCLSGCSSLASLEGGQQL 639
Query: 254 HALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYT 313
H++ G SD FVG ALV+MY + + A+ F+ + + + G+ N
Sbjct: 640 HSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQG 699
Query: 314 WNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR-CGYDSDVHIGTA 372
A+ F ML ++PD T ILSACS +E GK+ R G V
Sbjct: 700 NKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCAC 759
Query: 373 LVDMYAKCGSLKHARLAYKRISTPDLVSQNAML 405
+VD+ + G +++ +SQNA++
Sbjct: 760 MVDILGRVGKFDELEDFIQKMQ----LSQNALI 788
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 136/279 (48%), Gaps = 11/279 (3%)
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMY--CRYQ---DLVAAQMA 288
+ S+L CA SL K IH L + + D+ + +LV +Y CRY LV A+M
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMP 174
Query: 289 FDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATM 348
++ + L+ + +GF +++ LF EM + + P+ +T+ L ACS +
Sbjct: 175 DRDVVSWTALIQGLVAEGFAN-----DSIYLFQEMQNEGIMPNEFTLATGLKACSLCMAL 229
Query: 349 ERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAY 408
+ GKQ+HA A + G D+ +G+ALVD+YAKCG ++ A + + + V+ N +L Y
Sbjct: 230 DLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGY 289
Query: 409 AMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSL 468
A G + F ++ + + + + L C ++ ++K G L+ + +
Sbjct: 290 AQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNE 349
Query: 469 KHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALL 507
+VD+ S+ G +A K I PD V+W AL+
Sbjct: 350 FIGCGLVDMYSKCGLAIDAIGVFKTIK-KPDIVVWSALI 387
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 81/179 (45%), Gaps = 1/179 (0%)
Query: 338 ILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPD 397
+L C+S ++ K +H ++ + D H+ +LV++YAKC +ARL ++ D
Sbjct: 118 MLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDRD 177
Query: 398 LVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFD 457
+VS A++ G + I F+ + G P+ + + L AC ++ G +
Sbjct: 178 VVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHA 237
Query: 458 LMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNL 516
+ L + +VDL ++ GE+ A + +P D V W LL G G++
Sbjct: 238 QAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQND-VTWNVLLNGYAQRGDV 295
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/197 (20%), Positives = 89/197 (45%), Gaps = 8/197 (4%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG +++A+ +F+ + RD ++WN+++ A NG +AL RM + +P+ V
Sbjct: 661 MYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAF-RMMLDEGISPDGV 719
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
+++ ++ + G EE M + G+ P + ++ R+ K E +
Sbjct: 720 TFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFD---ELEDF 776
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSK-FSIKNEVSCNTIIVG--YCENGNV 176
I + N + ++ + +++ K +K F ++ E + I++ + G
Sbjct: 777 IQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQPEEESSYILLSNIFATEGRW 836
Query: 177 AEARELFDQMEHLGVQR 193
+ + + M GV++
Sbjct: 837 DDVKRVRSLMSSKGVKK 853
>gi|357154074|ref|XP_003576661.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Brachypodium distachyon]
Length = 802
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 176/512 (34%), Positives = 275/512 (53%), Gaps = 36/512 (7%)
Query: 90 LEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSAL 149
L P R + + ACA+ + L ++ H ++ + F + F+ N L+ +Y +C
Sbjct: 47 LAPTPRVYHAFITACAQSKNLDDARKIHAHLASSRFAGDAFLDNSLIHLYCKC------- 99
Query: 150 KIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNS 209
G+V EA ++FD+M + + ++SW S+I+GY N
Sbjct: 100 ------------------------GSVVEAHKVFDKMRN----KDMVSWTSLIAGYAQND 131
Query: 210 LYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVG 269
+ EA + +L + +P FTF S+L A G +IHALA+ D +VG
Sbjct: 132 MPAEAIGLLPGML-KGRFKPNGFTFASLLKAVGAYADSGIGGQIHALAVKCDWHEDVYVG 190
Query: 270 GALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLT 329
AL++MY R + A FD++++ + GF A+ +F+EM
Sbjct: 191 SALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMVFAEMQRNGFE 250
Query: 330 PDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLA 389
+T I SA + + +E+GK VHA+ I+ +G ++DMYAK GS+ AR
Sbjct: 251 ATHFTYSSIFSALAGIGALEQGKWVHAHMIKSRQKLTAFVGNTMLDMYAKSGSMIDARKV 310
Query: 390 YKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSI 449
++R+ DLV+ N+MLTA+A +G GKE ++HF + SG + ISFL L+AC H G +
Sbjct: 311 FERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQISFLCILTACSHGGLV 370
Query: 450 KTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
K G +FD++ Y+++P ++HY +VDLL RAG L A FI K+PM P + +WGALL
Sbjct: 371 KEGKHYFDMIKEYNLEPEIEHYVTVVDLLGRAGLLNYALVFIFKMPMEPTAAVWGALLAA 430
Query: 510 CVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSP 569
C H N + GQ AAD + +L+P+++G V+L N++A G W AR R+ MK + K P
Sbjct: 431 CRMHKNAKVGQFAADHVFQLDPDDSGPPVLLYNIYASTGHWDAAARVRKMMKATGVKKEP 490
Query: 570 GCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
CSW+E + +H F A+D +H R+EEIY + D
Sbjct: 491 ACSWVEIENSVHMFVANDDTHPRAEEIYKMWD 522
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/416 (25%), Positives = 179/416 (43%), Gaps = 46/416 (11%)
Query: 7 SLDDAKKVFKMMPER----DCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSW 62
+LDDA+K+ + D NS++ G V+EA + ++M + D +VSW
Sbjct: 66 NLDDARKIHAHLASSRFAGDAFLDNSLIHLYCKCGSVVEAHKVFDKMRNKD-----MVSW 120
Query: 63 SAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITR 122
+++I G+ QN EAIG+L M +PN T +S+L A +G + H +
Sbjct: 121 TSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAVGAYADSGIGGQIHALAVK 180
Query: 123 NGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAREL 182
+ + +V + L+D+Y RCG M A +F K KN VS N +I G+ G+ A +
Sbjct: 181 CDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMV 240
Query: 183 FDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACA 242
F +M+ R+G E T FT+ S+ A A
Sbjct: 241 FAEMQ------------------------------------RNGFEATHFTYSSIFSALA 264
Query: 243 DMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKM 302
+ +L +GK +HA I + FVG +++MY + ++ A+ F+ + N + +
Sbjct: 265 GIGALEQGKWVHAHMIKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNS 324
Query: 303 KEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCG 362
F A+ F EM + + + IL+ACS ++ GK
Sbjct: 325 MLTAFAQYGLGKEAVSHFEEMRKSGIYLNQISFLCILTACSHGGLVKEGKHYFDMIKEYN 384
Query: 363 YDSDVHIGTALVDMYAKCGSLKHARL-AYKRISTPDLVSQNAMLTAYAMHGHGKEG 417
+ ++ +VD+ + G L +A + +K P A+L A MH + K G
Sbjct: 385 LEPEIEHYVTVVDLLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMHKNAKVG 440
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 113/256 (44%), Gaps = 35/256 (13%)
Query: 55 ETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGK 114
++ N VSW+A+I GF + G E A+ + MQ G E T SS+ A A + L GK
Sbjct: 214 DSKNGVSWNALISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSALAGIGALEQGK 273
Query: 115 EFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
H ++ ++ FV N ++D+Y + G M+ A K+F + K+ V+ N+++ + + G
Sbjct: 274 WVHAHMIKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYG 333
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEA---FSMFR------------ 219
EA F++M G+ IS+ +++ L E F M +
Sbjct: 334 LGKEAVSHFEEMRKSGIYLNQISFLCILTACSHGGLVKEGKHYFDMIKEYNLEPEIEHYV 393
Query: 220 ---DLLMRDGI-------------EPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQ 263
DLL R G+ EPT+ +G++L AC + K ++ A Q
Sbjct: 394 TVVDLLGRAGLLNYALVFIFKMPMEPTAAVWGALLAAC----RMHKNAKVGQFAADHVFQ 449
Query: 264 SDTFVGGALVEMYCRY 279
D G V +Y Y
Sbjct: 450 LDPDDSGPPVLLYNIY 465
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 1/106 (0%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K GS+ DA+KVF+ + +D V+WNS++TA A GL EA+ E M N +
Sbjct: 297 MYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRK-SGIYLNQI 355
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACAR 106
S+ ++ + G +E ++ LEP +V+ R
Sbjct: 356 SFLCILTACSHGGLVKEGKHYFDMIKEYNLEPEIEHYVTVVDLLGR 401
>gi|449530628|ref|XP_004172296.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
Length = 611
Score = 331 bits (849), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 179/567 (31%), Positives = 301/567 (53%), Gaps = 39/567 (6%)
Query: 69 FTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFM-S 127
+ G EA+ L R+ G+ +L CA+ + GK H ++ GF
Sbjct: 37 LSSQGRLPEALSYLDRLAQRGIRLPTGIFVDLLRLCAKAKYFKGGKCVHLHLKHTGFKRP 96
Query: 128 NPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQME 187
V N L+ +Y CG + A K+F K S++N S N ++ GY + G+V AR+LFD+M
Sbjct: 97 TTIVANHLIGMYFECGRDVEARKVFDKMSVRNLYSWNHMLAGYAKLGDVNNARKLFDRM- 155
Query: 188 HLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSL 247
+++ ++SWN+++ Y ++EA ++RD D + +F+F VLI C + L
Sbjct: 156 ---MEKDVVSWNTIVLAYAKQGCFNEAIGLYRDFRRLD-MGFNAFSFAGVLILCVKLKEL 211
Query: 248 RKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI--------------- 292
+ K++H + G S+ + ++V+ Y + ++ A+ FDE+
Sbjct: 212 QLAKQVHGQVLVAGFLSNLVLSSSIVDAYSKCGEMRCARTLFDEMLVKDIHAWTTIVSGY 271
Query: 293 ------ENIENLLGKMKE----------DGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVG 336
+ L +M E G+ N A+ F++M+ + P+ YT
Sbjct: 272 AKWGDMNSASELFHQMPEKNPVSWSALISGYARNSLGHEALDYFTKMMKFGINPEQYTFS 331
Query: 337 IILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRI-ST 395
L AC+S+A ++ GKQVH Y IR + + + ++L+DMY+KCG L+ + + + +
Sbjct: 332 SCLCACASIAALKHGKQVHGYLIRTYFRCNTIVVSSLIDMYSKCGMLEASCCVFHLMGNK 391
Query: 396 PDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEF 455
D+V N M++A A +GHG++ + F ++ SG +PD I+F+ LSAC H+G ++ G F
Sbjct: 392 QDVVVWNTMISALAQNGHGEKAMQMFNDMVESGLKPDRITFIVILSACSHSGLVQEGLRF 451
Query: 456 FDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
F M Y + V P +HY C++DLL RAG E ++ + PD +W ALLG C H
Sbjct: 452 FKAMTYDHGVFPDQEHYACLIDLLGRAGCFVELVNELENMSCKPDDRVWSALLGVCRIHN 511
Query: 515 NLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWI 574
N+E G+ A+R+IEL+P ++ YV LA+L+A+ G+W + + R+ M ++ + K G SWI
Sbjct: 512 NIELGRKVAERVIELKPQSSAAYVSLASLYAFLGKWESVEKVRELMDEKFIRKERGISWI 571
Query: 575 EDRDEIHKFRASDRSHDRSEEIYTIID 601
+ ++ H F ASDR H EEIY +++
Sbjct: 572 DVGNKTHSFIASDRLHPLKEEIYLLLE 598
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 123/383 (32%), Positives = 200/383 (52%), Gaps = 12/383 (3%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +CG +A+KVF M R+ SWN ++ A G V A + +RM D +V
Sbjct: 107 MYFECGRDVEARKVFDKMSVRNLYSWNHMLAGYAKLGDVNNARKLFDRMMEKD-----VV 161
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ ++ + + G EAIG+ + + NA + + VL C +L++L L K+ HG +
Sbjct: 162 SWNTIVLAYAKQGCFNEAIGLYRDFRRLDMGFNAFSFAGVLILCVKLKELQLAKQVHGQV 221
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
GF+SN + + +VD Y +CG+M A +F + +K+ + TI+ GY + G++ A
Sbjct: 222 LVAGFLSNLVLSSSIVDAYSKCGEMRCARTLFDEMLVKDIHAWTTIVSGYAKWGDMNSAS 281
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
ELF QM ++ +SW+++ISGY NSL EA F +M+ GI P +TF S L A
Sbjct: 282 ELFHQMP----EKNPVSWSALISGYARNSLGHEALDYFTK-MMKFGINPEQYTFSSCLCA 336
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN-LL 299
CA + +L+ GK++H I + +T V +L++MY + L A+ F + N ++ ++
Sbjct: 337 CASIAALKHGKQVHGYLIRTYFRCNTIVVSSLIDMYSKCGMLEASCCVFHLMGNKQDVVV 396
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG-KQVHAYA 358
N + AMQ+F++M+ L PD T +ILSACS ++ G + A
Sbjct: 397 WNTMISALAQNGHGEKAMQMFNDMVESGLKPDRITFIVILSACSHSGLVQEGLRFFKAMT 456
Query: 359 IRCGYDSDVHIGTALVDMYAKCG 381
G D L+D+ + G
Sbjct: 457 YDHGVFPDQEHYACLIDLLGRAG 479
>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 734
Score = 331 bits (848), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 196/600 (32%), Positives = 314/600 (52%), Gaps = 74/600 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC DA++VF MP RD V
Sbjct: 103 MYAKCRRPADARRVFDRMPVRD------------------------------------RV 126
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
+W+A++ G+ +NG A+ M+ RMQ E G P++ TL SVLPACA + L+ +E H +
Sbjct: 127 AWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAACREAHAF 186
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
R+G LV+V I+ YC+ G++ A
Sbjct: 187 AIRSGL-------EELVNV------------------------ATAILDAYCKCGDIRAA 215
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
R +FD M + +SWN+MI GY N EA ++F + ++ +G++ T + + L
Sbjct: 216 RVVFDWMP----TKNSVSWNAMIDGYAQNGDSREALALF-NRMVEEGVDVTDVSVLAALQ 270
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
AC ++ L +G +H L + +GL S+ V AL+ MY + + + A FDE++ +
Sbjct: 271 ACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVS 330
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
G N + +A++LF+ M ++ PD +T+ ++ A + ++ + + +H Y+I
Sbjct: 331 WNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSI 390
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
R D DV++ TAL+DMYAKCG + AR+ + +++ NAM+ Y HG GK +
Sbjct: 391 RLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVE 450
Query: 420 HFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLL 478
F + + G P+ +FLS LSAC HAG + G E+F M Y ++P ++HY MVDLL
Sbjct: 451 LFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLL 510
Query: 479 SRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYV 538
RAG+L EA+ FI+K+PM P ++GA+LG C H N+E + +A ++ EL P +V
Sbjct: 511 GRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVYHV 570
Query: 539 MLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYT 598
+LAN++A A W D+AR R M+ + K+PG S I+ ++EIH F + +H +++EIY+
Sbjct: 571 LLANIYANASMWKDVARVRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQAKEIYS 630
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 117/462 (25%), Positives = 196/462 (42%), Gaps = 44/462 (9%)
Query: 78 AIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVD 137
A+ M + G P RT +S+L CA L+ G+ H + G S L +
Sbjct: 43 ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102
Query: 138 VYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIIS 197
+Y +C A+AR +FD+M R ++
Sbjct: 103 MYAKCR-------------------------------RPADARRVFDRMP----VRDRVA 127
Query: 198 WNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALA 257
WN++++GY N L A M + +G P S T SVL ACA+ +L +E HA A
Sbjct: 128 WNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAACREAHAFA 187
Query: 258 IALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAM 317
I GL+ V A+++ YC+ D+ AA++ FD + ++ DG+ N + A+
Sbjct: 188 IRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREAL 247
Query: 318 QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMY 377
LF+ M+ + +V L AC L ++ G +VH +R G DS+V + AL+ MY
Sbjct: 248 ALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMY 307
Query: 378 AKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFL 437
+KC + A + + VS NAM+ A +G ++ + F R+ +PD + +
Sbjct: 308 SKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLV 367
Query: 438 SALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMA 497
S + A + + T ++D+ ++ G + A +
Sbjct: 368 SVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIA-RILFNSARE 426
Query: 498 PDSVMWGALLGGCVSHGNLEFGQIAADRLIELE-----PNNT 534
+ W A++ G SHG FG+ A + E++ PN T
Sbjct: 427 RHVITWNAMIHGYGSHG---FGKAAVELFEEMKSIGIVPNET 465
>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 866
Score = 331 bits (848), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 184/573 (32%), Positives = 312/573 (54%), Gaps = 46/573 (8%)
Query: 27 NSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQ 86
NS+V + + +V +A + M E N VSW+++I GF NG D EA + +RM+
Sbjct: 232 NSMVNMYSKSLMVSDAKAVFDSM-----ENRNAVSWNSMIAGFVTNGLDLEAFELFYRMR 286
Query: 87 AEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDML 146
EG++ ++V+ CA ++++S K+ H + +NG + + L+ Y +C ++
Sbjct: 287 LEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEID 346
Query: 147 SALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYV 206
A K+F M H GVQ ++SW ++ISGYV
Sbjct: 347 DAFKLFC--------------------------------MMH-GVQ-NVVSWTAIISGYV 372
Query: 207 DNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDT 266
N D A ++F + R+G+ P FT+ ++L A N+ +IHAL + ++
Sbjct: 373 QNGRTDRAMNLFCQM-RREGVRPNHFTYSTILTA----NAAVSPSQIHALVVKTNYENSP 427
Query: 267 FVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSL 326
VG AL + Y + D A F+ I+ + + G+ A+++F ++
Sbjct: 428 SVGTALSDSYSKIGDANEAAKIFELIDEKDIVAWSAMLSGYAQMGDIEGAVKIFLQLAKE 487
Query: 327 DLTPDIYTVGIILSACSS-LATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKH 385
+ P+ +T +L+AC++ A++E+GKQ H+ +I+ G+ + + + +ALV MYAK G+++
Sbjct: 488 GVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIES 547
Query: 386 ARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVH 445
A +KR DLVS N+M++ YA HG GK+ + F + + D I+F+ +SAC H
Sbjct: 548 ANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTH 607
Query: 446 AGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWG 504
AG + G +FDLM Y + P+++HY+CMVDL SRAG L +A + I K+P + +W
Sbjct: 608 AGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWR 667
Query: 505 ALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRR 564
LL C H N++ G++AA++LI L+P ++ YV+L+N++A AG W + A+ R+ M ++
Sbjct: 668 TLLAACRVHLNVQLGELAAEKLISLQPQDSAAYVLLSNIYATAGNWQERAKVRKLMDMKK 727
Query: 565 MHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
+ K G SWIE +++ F A D SH +S+ IY
Sbjct: 728 VKKEAGYSWIEVKNKTFSFMAGDLSHPQSDRIY 760
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 137/498 (27%), Positives = 228/498 (45%), Gaps = 70/498 (14%)
Query: 52 LDNETPN--LVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQK 109
L +ETP L + ++ F++N ++EA+ + ++ G + +LS VL C L
Sbjct: 48 LFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLFD 107
Query: 110 LSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVG 169
+GK+ H + GF+ + V LVD+Y + + ++F + +KN VS +++ G
Sbjct: 108 RIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAG 167
Query: 170 YCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEP 229
Y +NG +A +LF QM+ +GI+P
Sbjct: 168 YRQNGLNEQALKLFSQMQ------------------------------------LEGIKP 191
Query: 230 TSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAF 289
FTF +VL A ++ KG ++H + I GL S FVG ++V MY + + A+ F
Sbjct: 192 NPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVF 251
Query: 290 DEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEML--SLDLTPDIYTVGIILSACSSLAT 347
D +EN + GF N A +LF M + LT I+ I L C+++
Sbjct: 252 DSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKL--CANIKE 309
Query: 348 MERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHA-RLAYKRISTPDLVSQNAMLT 406
M KQ+H I+ G D D++I TAL+ Y+KC + A +L ++VS A+++
Sbjct: 310 MSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIIS 369
Query: 407 AYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSAC-------VHAGSIKTGSEFFDLM 459
Y +G + F ++ G RP+H ++ + L+A +HA +KT
Sbjct: 370 GYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTANAAVSPSQIHALVVKTN------- 422
Query: 460 AYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE-- 517
Y+ PS+ T + D S+ G+ EA + + I D V W A+L G G++E
Sbjct: 423 --YENSPSVG--TALSDSYSKIGDANEAAKIFELID-EKDIVAWSAMLSGYAQMGDIEGA 477
Query: 518 ---FGQIAADRLIELEPN 532
F Q+A + +EPN
Sbjct: 478 VKIFLQLAKE---GVEPN 492
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 156/349 (44%), Gaps = 31/349 (8%)
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
+++LFD+ G+ R N ++ + N EA ++F L R G + VL
Sbjct: 45 SQQLFDETPQQGLSRN----NHLLFEFSRNDQNKEALNLFLGL-RRSGSPTDGSSLSCVL 99
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDE--IENIE 296
C + GK++H I G D VG +LV+MY + + + + FDE ++N+
Sbjct: 100 KVCGCLFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVV 159
Query: 297 NLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHA 356
+ + G+ N A++LFS+M + P+ +T +L ++ +E+G QVH
Sbjct: 160 SWTSLLA--GYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHT 217
Query: 357 YAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKE 416
I+ G DS + +G ++V+MY+K + A+ + + + VS N+M+ + +G E
Sbjct: 218 MVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLE 277
Query: 417 GIAHFRRILASGFRPDHISFLSALSAC-----------VHAGSIKTGSEFFDLMAYYDVK 465
F R+ G + F + + C +H IK GS+F
Sbjct: 278 AFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDF---------- 327
Query: 466 PSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
L T ++ S+ E+ +A++ + + V W A++ G V +G
Sbjct: 328 -DLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNG 375
>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
Length = 734
Score = 331 bits (848), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 196/600 (32%), Positives = 314/600 (52%), Gaps = 74/600 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC DA++VF MP RD V
Sbjct: 103 MYAKCRRPADARRVFDRMPVRD------------------------------------RV 126
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
+W+A++ G+ +NG A+ M+ RMQ E G P++ TL SVLPACA + L+ +E H +
Sbjct: 127 AWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAACREAHAF 186
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
R+G LV+V I+ YC+ G++ A
Sbjct: 187 AIRSGL-------EELVNV------------------------ATAILDAYCKCGDIRAA 215
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
R +FD M + +SWN+MI GY N EA ++F + ++ +G++ T + + L
Sbjct: 216 RVVFDWMP----TKNSVSWNAMIDGYAQNGDSREALALF-NRMVEEGVDVTDVSVLAALQ 270
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
AC ++ L +G +H L + +GL S+ V AL+ MY + + + A FDE++ +
Sbjct: 271 ACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVS 330
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
G N + +A++LF+ M ++ PD +T+ ++ A + ++ + + +H Y+I
Sbjct: 331 WNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSI 390
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
R D DV++ TAL+DMYAKCG + AR+ + +++ NAM+ Y HG GK +
Sbjct: 391 RLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVE 450
Query: 420 HFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLL 478
F + + G P+ +FLS LSAC HAG + G E+F M Y ++P ++HY MVDLL
Sbjct: 451 LFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLL 510
Query: 479 SRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYV 538
RAG+L EA+ FI+K+PM P ++GA+LG C H N+E + +A ++ EL P +V
Sbjct: 511 GRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVYHV 570
Query: 539 MLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYT 598
+LAN++A A W D+AR R M+ + K+PG S I+ ++EIH F + +H +++EIY+
Sbjct: 571 LLANIYANASMWKDVARVRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQAKEIYS 630
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 117/462 (25%), Positives = 196/462 (42%), Gaps = 44/462 (9%)
Query: 78 AIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVD 137
A+ M + G P RT +S+L CA L+ G+ H + G S L +
Sbjct: 43 ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102
Query: 138 VYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIIS 197
+Y +C A+AR +FD+M R ++
Sbjct: 103 MYAKCR-------------------------------RPADARRVFDRMP----VRDRVA 127
Query: 198 WNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALA 257
WN++++GY N L A M + +G P S T SVL ACA+ +L +E HA A
Sbjct: 128 WNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAACREAHAFA 187
Query: 258 IALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAM 317
I GL+ V A+++ YC+ D+ AA++ FD + ++ DG+ N + A+
Sbjct: 188 IRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREAL 247
Query: 318 QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMY 377
LF+ M+ + +V L AC L ++ G +VH +R G DS+V + AL+ MY
Sbjct: 248 ALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMY 307
Query: 378 AKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFL 437
+KC + A + + VS NAM+ A +G ++ + F R+ +PD + +
Sbjct: 308 SKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLV 367
Query: 438 SALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMA 497
S + A + + T ++D+ ++ G + A +
Sbjct: 368 SVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIA-RILFNSARE 426
Query: 498 PDSVMWGALLGGCVSHGNLEFGQIAADRLIELE-----PNNT 534
+ W A++ G SHG FG+ A + E++ PN T
Sbjct: 427 RHVITWNAMIHGYGSHG---FGKAAVELFEEMKSIGIVPNET 465
>gi|108712052|gb|ABF99847.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1221
Score = 331 bits (848), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 187/603 (31%), Positives = 308/603 (51%), Gaps = 82/603 (13%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +CGSL AK+VF M ++P++V
Sbjct: 85 MYSRCGSLPAAKEVFDRM------------------------------------DSPDVV 108
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
++++I F +NG E A L +M +GL+PN T++++L AC R+ LG++ HGY+
Sbjct: 109 GYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRV----LGQQIHGYL 164
Query: 121 TRN-GFMSNP-FVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
+ G S + L+D Y R G+ A +F +C+N
Sbjct: 165 IKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSL--------------HCKN----- 205
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
++SW SM+ Y+ + +EA +F D++ +G++P F VL
Sbjct: 206 ----------------VVSWCSMMQLYIRDGRLEEALQVFGDMI-SEGVDPNEFALSIVL 248
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
AC S+ G+++H AI L +D V AL+ MY R + + ++IEN + +
Sbjct: 249 GACG---SIGLGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLV 305
Query: 299 LGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYA 358
N + A+ L +M S TP+ Y +LS+C+ +A++++G Q H A
Sbjct: 306 SWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLA 365
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGI 418
++ G DS++ G AL++MY+KCG + ARLA+ + T D+ S N+++ +A HG + +
Sbjct: 366 LKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKAL 425
Query: 419 AHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDL 477
F ++ ++G +PD +FL L C H+G ++ G FF LM Y P+ HY CM+D+
Sbjct: 426 EVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDM 485
Query: 478 LSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNY 537
L R G EA I +P PD+++W LL C H NL+ G++AADRL+EL ++ +Y
Sbjct: 486 LGRNGRFDEALRMINDMPFEPDALIWKTLLASCKLHRNLDIGKLAADRLMELSDRDSASY 545
Query: 538 VMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
V+++N++A G W D + R++M + + K GCSWIE +E+H F + D SH S+ IY
Sbjct: 546 VLMSNIYAMHGEWEDARKVRRRMDETGVKKDAGCSWIEINNEVHTFASRDMSHPNSDSIY 605
Query: 598 TII 600
++
Sbjct: 606 QML 608
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/340 (28%), Positives = 169/340 (49%), Gaps = 14/340 (4%)
Query: 192 QRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGK 251
++ +++W S++SGY N + A +MF D++ G+ P F + L+ACAD+ +LR G+
Sbjct: 3 RKNVVAWTSVMSGYTRNGRPEAALAMFADMV-ESGVAPNDFACNAALVACADLGALRAGE 61
Query: 252 EIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNV 311
++H+LA+ G D ++G L+EMY R L AA+ FD +++ + + F N
Sbjct: 62 QVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRNG 121
Query: 312 YTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI-RCGYDSD-VHI 369
A + +ML L P+ +T+ IL+AC + G+Q+H Y I + G S V+
Sbjct: 122 EFELAAEALIQMLKQGLKPNEHTMTTILTACPRVL----GQQIHGYLIKKIGLRSQSVYS 177
Query: 370 GTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGF 429
TAL+D Y++ G K A+ + + ++VS +M+ Y G +E + F +++ G
Sbjct: 178 STALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGV 237
Query: 430 RPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYE 489
P+ + L AC GSI G + +D+ ++ ++ + R G + E
Sbjct: 238 DPNEFALSIVLGAC---GSIGLGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEA 294
Query: 490 FIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIEL 529
+ KI PD V W + +G FG+ A L ++
Sbjct: 295 MLNKIE-NPDLVSWTTAISANFQNG---FGEKAIALLCQM 330
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 115/238 (48%), Gaps = 5/238 (2%)
Query: 306 GFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDS 365
G+ N A+ +F++M+ + P+ + L AC+ L + G+QVH+ A+R G+
Sbjct: 15 GYTRNGRPEAALAMFADMVESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAG 74
Query: 366 DVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRIL 425
D IG+ L++MY++CGSL A+ + R+ +PD+V ++++A+ +G + ++L
Sbjct: 75 DAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQML 134
Query: 426 ASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELG 485
G +P+ + + L+AC + + S+ T ++D SR GE
Sbjct: 135 KQGLKPNEHTMTTILTACPRVLGQQIHGYLIKKIGLR--SQSVYSSTALIDFYSRNGEFK 192
Query: 486 EAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFG-QIAADRLIE-LEPNNTGNYVMLA 541
A + + V W +++ + G LE Q+ D + E ++PN ++L
Sbjct: 193 LAKAVFDSL-HCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLG 249
>gi|357131819|ref|XP_003567531.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Brachypodium distachyon]
Length = 822
Score = 331 bits (848), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 174/591 (29%), Positives = 310/591 (52%), Gaps = 48/591 (8%)
Query: 15 FKMMPERDCVSWNSVV---TACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQ 71
+++ E D N+++ C+ L + +C+E NLVSW+ +I G+ Q
Sbjct: 242 YRIAVETDASVINALIDLYCKCSRLSLARKLFDCME--------NRNLVSWTTMIAGYMQ 293
Query: 72 NGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFV 131
N D EA+ M +++ EG +P+ +S+L +C L + G++ H + + S+ +V
Sbjct: 294 NSCDAEAMAMFWQLSQEGWQPDVFACASILNSCGSLAAIWQGRQVHAHAIKANLESDEYV 353
Query: 132 VNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGV 191
N L+D+Y +C + A +F + + +S N +I GY G++A A ++F +M +
Sbjct: 354 KNSLIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYSRLGDLAGAIDVFSKMRYC-- 411
Query: 192 QRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGK 251
++P+ TF S+L + +++ K
Sbjct: 412 ----------------------------------SLKPSPLTFVSLLGVSSSQSAIELSK 437
Query: 252 EIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNV 311
+IH L + G D + G +L+++Y ++ + A+ F+ + N + ++ G N
Sbjct: 438 QIHGLIVKSGTSLDLYAGSSLIDVYSKFSLVEDAKAVFNLMHNRDMVIWNAMIFGLAQNE 497
Query: 312 YTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGT 371
A++LF+++ L P+ +T +++ S+L +M G+Q HA I+ G DSD H+
Sbjct: 498 QGEEAVKLFNQLQVSGLAPNEFTFVALVTVASTLVSMFHGQQFHAQIIKAGADSDHHVSN 557
Query: 372 ALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRP 431
AL+DMYAKCG +K RL ++ D++ N+M++ YA HG +E + FR + +G P
Sbjct: 558 ALIDMYAKCGFIKEGRLLFESTLGKDVICWNSMISTYAQHGQAEEALYVFRMMGGTGVEP 617
Query: 432 DHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMVDLLSRAGELGEAYEF 490
++++F+ LSAC HAG + G FD M Y ++P +HY +V+L R+G+L A EF
Sbjct: 618 NYVTFVGVLSACAHAGLVDEGLRHFDFMKTKYAIEPGTEHYASVVNLFGRSGKLHAAKEF 677
Query: 491 IKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRW 550
I+++P+ P + +W +LL C GN+E G+ A + + +P ++G V+++N++A G W
Sbjct: 678 IERMPIEPAAAVWRSLLSACHLFGNVEIGRYATEMALLADPADSGPSVLMSNIYASRGLW 737
Query: 551 SDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
SD + RQ M + K PG SWIE E+H F A R H ++ IY+++D
Sbjct: 738 SDAQKLRQGMDCAGVVKEPGYSWIEVMKEVHTFIARGREHPEADVIYSLLD 788
Score = 201 bits (511), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 134/510 (26%), Positives = 231/510 (45%), Gaps = 75/510 (14%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y K G + DA+++F MP + NLVS
Sbjct: 56 YSKLGRVRDARRLFDRMPHK------------------------------------NLVS 79
Query: 62 WSAVIGGFTQNGYDEEAIGML--FRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
W + I Q+G +E+A+ + F+ + G PN L+S L ACA+ + +S G++ HG
Sbjct: 80 WGSAISMHAQHGCEEDAVALFAAFQRASGGEAPNEFLLASALRACAQSRAVSFGQQVHGV 139
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
R G N +V L+++Y + G + +A+ +F +KN V+ +I GY + G A
Sbjct: 140 AVRIGLDGNVYVGTALINLYAKVGCIDAAMLVFDALPVKNPVTWTAVITGYSQIGQGGVA 199
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
ELF +M G+ DG+ P F S +
Sbjct: 200 LELFGKM-------GL-----------------------------DGVRPDRFVLASAVS 223
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
AC+ + L G++ H A + +++D V AL+++YC+ L A+ FD +EN +
Sbjct: 224 ACSALGFLEGGRQTHGYAYRIAVETDASVINALIDLYCKCSRLSLARKLFDCMENRNLVS 283
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
G+ N AM +F ++ PD++ IL++C SLA + +G+QVHA+AI
Sbjct: 284 WTTMIAGYMQNSCDAEAMAMFWQLSQEGWQPDVFACASILNSCGSLAAIWQGRQVHAHAI 343
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
+ +SD ++ +L+DMYAKC L AR ++ ++ D +S NAM+ Y+ G I
Sbjct: 344 KANLESDEYVKNSLIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYSRLGDLAGAID 403
Query: 420 HFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLS 479
F ++ +P ++F+S L +I+ + L+ L + ++D+ S
Sbjct: 404 VFSKMRYCSLKPSPLTFVSLLGVSSSQSAIELSKQIHGLIVKSGTSLDLYAGSSLIDVYS 463
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
+ L E + + + D V+W A++ G
Sbjct: 464 KF-SLVEDAKAVFNLMHNRDMVIWNAMIFG 492
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 106/392 (27%), Positives = 183/392 (46%), Gaps = 39/392 (9%)
Query: 164 NTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLM 223
N ++ Y + G V +AR LFD+M H + ++SW S IS + + ++A ++F
Sbjct: 50 NLLLRAYSKLGRVRDARRLFDRMPH----KNLVSWGSAISMHAQHGCEEDAVALFAAFQR 105
Query: 224 RDGIE-PTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDL 282
G E P F S L ACA ++ G+++H +A+ +GL + +VG AL+ +Y + +
Sbjct: 106 ASGGEAPNEFLLASALRACAQSRAVSFGQQVHGVAVRIGLDGNVYVGTALINLYAKVGCI 165
Query: 283 VAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSAC 342
AA + FD + + G+ A++LF +M + PD + + +SAC
Sbjct: 166 DAAMLVFDALPVKNPVTWTAVITGYSQIGQGGVALELFGKMGLDGVRPDRFVLASAVSAC 225
Query: 343 SSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQN 402
S+L +E G+Q H YA R ++D + AL+D+Y KC L AR + + +LVS
Sbjct: 226 SALGFLEGGRQTHGYAYRIAVETDASVINALIDLYCKCSRLSLARKLFDCMENRNLVSWT 285
Query: 403 AMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSAC-----------VHAGSIKT 451
M+ Y + E +A F ++ G++PD + S L++C VHA +IK
Sbjct: 286 TMIAGYMQNSCDAEAMAMFWQLSQEGWQPDVFACASILNSCGSLAAIWQGRQVHAHAIKA 345
Query: 452 GSEFFDLM--AYYDVKPSLKH------------------YTCMVDLLSRAGELGEAYEFI 491
E + + + D+ +H Y M++ SR G+L A +
Sbjct: 346 NLESDEYVKNSLIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYSRLGDLAGAIDVF 405
Query: 492 KKI---PMAPDSVMWGALLGGCVSHGNLEFGQ 520
K+ + P + + +LLG S +E +
Sbjct: 406 SKMRYCSLKPSPLTFVSLLGVSSSQSAIELSK 437
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 107/252 (42%), Gaps = 36/252 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y K ++DAK VF +M RD V WN
Sbjct: 461 VYSKFSLVEDAKAVFNLMHNRDMVIWN--------------------------------- 487
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
A+I G QN EEA+ + ++Q GL PN T +++ + L + G++FH I
Sbjct: 488 ---AMIFGLAQNEQGEEAVKLFNQLQVSGLAPNEFTFVALVTVASTLVSMFHGQQFHAQI 544
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G S+ V N L+D+Y +CG + +F K+ + N++I Y ++G EA
Sbjct: 545 IKAGADSDHHVSNALIDMYAKCGFIKEGRLLFESTLGKDVICWNSMISTYAQHGQAEEAL 604
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+F M GV+ +++ ++S L DE F + + IEP + + SV+
Sbjct: 605 YVFRMMGGTGVEPNYVTFVGVLSACAHAGLVDEGLRHFDFMKTKYAIEPGTEHYASVVNL 664
Query: 241 CADMNSLRKGKE 252
L KE
Sbjct: 665 FGRSGKLHAAKE 676
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 121/263 (46%), Gaps = 15/263 (5%)
Query: 234 FGSVLIACADMNSLRKGKEI-HALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI 292
+L++C + L + + HA A+ G D F+ L+ Y + + A+ FD +
Sbjct: 13 LAQLLLSCLAGDRLHRLLPLAHARAVVTGALPDLFLANLLLRAYSKLGRVRDARRLFDRM 72
Query: 293 ENIENL------LGKMKEDGFEPNVYTWNAMQLFS--EMLSLDLTPDIYTVGIILSACSS 344
+ +NL + + G E + A+ LF+ + S P+ + + L AC+
Sbjct: 73 PH-KNLVSWGSAISMHAQHGCEED-----AVALFAAFQRASGGEAPNEFLLASALRACAQ 126
Query: 345 LATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAM 404
+ G+QVH A+R G D +V++GTAL+++YAK G + A L + + + V+ A+
Sbjct: 127 SRAVSFGQQVHGVAVRIGLDGNVYVGTALINLYAKVGCIDAAMLVFDALPVKNPVTWTAV 186
Query: 405 LTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDV 464
+T Y+ G G + F ++ G RPD SA+SAC G ++ G + V
Sbjct: 187 ITGYSQIGQGGVALELFGKMGLDGVRPDRFVLASAVSACSALGFLEGGRQTHGYAYRIAV 246
Query: 465 KPSLKHYTCMVDLLSRAGELGEA 487
+ ++DL + L A
Sbjct: 247 ETDASVINALIDLYCKCSRLSLA 269
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 2/117 (1%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG + + + +F+ +D + WNS+++ A +G EAL M E PN V
Sbjct: 562 MYAKCGFIKEGRLLFESTLGKDVICWNSMISTYAQHGQAEEALYVFRMMGGTGVE-PNYV 620
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEF 116
++ V+ G +E + M+ + +EP +SV+ R KL KEF
Sbjct: 621 TFVGVLSACAHAGLVDEGLRHFDFMKTKYAIEPGTEHYASVVNLFGRSGKLHAAKEF 677
>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 331 bits (848), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 182/548 (33%), Positives = 285/548 (52%), Gaps = 37/548 (6%)
Query: 55 ETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGK 114
+ PN+ W+ +I G ++AI + M+ G PN T+ VL ACAR + LG
Sbjct: 75 KEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGL 134
Query: 115 EFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
+ H + + G+ + FV L+ +Y +C + ALK+F KN
Sbjct: 135 KIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKN--------------- 179
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTF 234
++SW ++I+GY+ + + EA F+ LL G++P SF+
Sbjct: 180 --------------------VVSWTAIITGYISSGHFREAIGAFKKLL-EMGLKPDSFSL 218
Query: 235 GSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIEN 294
VL ACA + G+ I G+ + FV +L++MY + +L A + F +
Sbjct: 219 VKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPE 278
Query: 295 IENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV 354
+ + G+ N A+ LF +M S +L PD YT+ +LSAC++L ++ G
Sbjct: 279 KDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWA 338
Query: 355 HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHG 414
+ R + S+ +GTAL+DMY+KCGS+ A + + D V NAM+ +M+GH
Sbjct: 339 SSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKKKDRVVWNAMMVGLSMNGHA 398
Query: 415 KEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTC 473
K + F + G RPD +F+ L C H G + G +FF+ M + + PS++HY C
Sbjct: 399 KAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGC 458
Query: 474 MVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNN 533
MVDLL RAG L EA++ I +PM P++V+WGALLGGC H + + +LIELEP N
Sbjct: 459 MVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLIELEPWN 518
Query: 534 TGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRS 593
+GNYV L+N+++ RW + + R MK++++ K CSWIE +H+F D+SH S
Sbjct: 519 SGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQKIRACSWIEIDGIVHEFLVGDKSHWLS 578
Query: 594 EEIYTIID 601
E+IY +D
Sbjct: 579 EKIYAKLD 586
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 176/353 (49%), Gaps = 8/353 (2%)
Query: 164 NTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLM 223
N I+ + G+ ++ +F Q++ + I WN+MI G V +D+A ++ M
Sbjct: 52 NLILCCALDFGSTNYSKLVFSQVK----EPNIFLWNTMIRGLVSKDCFDDAIHLYGS--M 105
Query: 224 R-DGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDL 282
R G P +FT VL ACA +R G +IH+L + G D FV +L+ +Y + +
Sbjct: 106 RGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNF 165
Query: 283 VAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSAC 342
A FD+I + + G+ + + A+ F ++L + L PD +++ +L+AC
Sbjct: 166 DDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAAC 225
Query: 343 SSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQN 402
+ L G+ + Y G +V + T+L+DMY KCG+L+ A L + + D+VS +
Sbjct: 226 ARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWS 285
Query: 403 AMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYY 462
M+ YA +G ++ + F ++ + +PD + + LSAC G++ G LM
Sbjct: 286 TMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRN 345
Query: 463 DVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
+ + T ++D+ S+ G + +A+E + D V+W A++ G +G+
Sbjct: 346 EFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMK-KKDRVVWNAMMVGLSMNGH 397
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 106/414 (25%), Positives = 171/414 (41%), Gaps = 76/414 (18%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KC + DDA KVF +P+++ VSW +++T
Sbjct: 158 LYVKCDNFDDALKVFDDIPDKNVVSWTAIIT----------------------------- 188
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
G+ +G+ EAIG ++ GL+P++ +L VL ACARL + G+ YI
Sbjct: 189 -------GYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYI 241
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ +G N FV L+D+Y +CG++ A IFS K+ VS +T+I GY NG +A
Sbjct: 242 SDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQAL 301
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+LF QM+ + ++P +T VL A
Sbjct: 302 DLFFQMQ------------------------------------SENLKPDCYTMVGVLSA 325
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA + +L G +L S+ +G AL++MY + + A F ++ + ++
Sbjct: 326 CATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKKKDRVVW 385
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G N + LFS + + PD T +L C+ + G+Q R
Sbjct: 386 NAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKR 445
Query: 361 CG--YDSDVHIGTALVDMYAKCGSLKHA-RLAYKRISTPDLVSQNAMLTAYAMH 411
S H G +VD+ + G L A +L P+ V A+L +H
Sbjct: 446 VFSLTPSIEHYG-CMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLH 498
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 133/296 (44%), Gaps = 39/296 (13%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG+L+ A +F MPE+D +V
Sbjct: 259 MYVKCGNLERANLIFSAMPEKD------------------------------------IV 282
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SWS +I G+ NG ++A+ + F+MQ+E L+P+ T+ VL ACA L L LG +
Sbjct: 283 SWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLM 342
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
RN F+SNP + L+D+Y +CG + A +IF+ K+ V N ++VG NG+
Sbjct: 343 DRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKKKDRVVWNAMMVGLSMNGHAKAVF 402
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LF +E G++ ++ ++ G +E F ++ + P+ +G ++
Sbjct: 403 SLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDL 462
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
L E H L + ++ + V GAL+ ++D A+ ++ +E
Sbjct: 463 LGRAGLL---NEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLIELE 515
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 139/320 (43%), Gaps = 34/320 (10%)
Query: 244 MNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMK 303
+N + K IHA + L L D ++ ++ + +++ F +++
Sbjct: 26 LNFFNQLKHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVK---------- 75
Query: 304 EDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSSLATME 349
EPN++ WN M L+ M P+ +T+ +L AC+ +
Sbjct: 76 ----EPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVR 131
Query: 350 RGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYA 409
G ++H+ ++ GYD DV + T+L+ +Y KC + A + I ++VS A++T Y
Sbjct: 132 LGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYI 191
Query: 410 MHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLK 469
GH +E I F+++L G +PD S + L+AC G +G ++ + ++
Sbjct: 192 SSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVF 251
Query: 470 HYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIEL 529
T ++D+ + G L A +P D V W ++ G +G Q A D ++
Sbjct: 252 VATSLLDMYVKCGNLERANLIFSAMP-EKDIVSWSTMIQGYAFNG---LPQQALDLFFQM 307
Query: 530 EPNNTGN--YVMLANLFAYA 547
+ N Y M+ L A A
Sbjct: 308 QSENLKPDCYTMVGVLSACA 327
>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 331 bits (848), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 182/548 (33%), Positives = 285/548 (52%), Gaps = 37/548 (6%)
Query: 55 ETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGK 114
+ PN+ W+ +I G ++AI + M+ G PN T+ VL ACAR + LG
Sbjct: 75 KEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGL 134
Query: 115 EFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
+ H + + G+ + FV L+ +Y +C + ALK+F KN
Sbjct: 135 KIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKN--------------- 179
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTF 234
++SW ++I+GY+ + + EA F+ LL G++P SF+
Sbjct: 180 --------------------VVSWTAIITGYISSGHFREAIGAFKKLL-EMGLKPDSFSL 218
Query: 235 GSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIEN 294
VL ACA + G+ I G+ + FV +L++MY + +L A + F +
Sbjct: 219 VKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPE 278
Query: 295 IENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV 354
+ + G+ N A+ LF +M S +L PD YT+ +LSAC++L ++ G
Sbjct: 279 KDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWA 338
Query: 355 HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHG 414
+ R + S+ +GTAL+DMY+KCGS+ A + + D V NAM+ +M+GH
Sbjct: 339 SSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKRKDRVVWNAMMVGLSMNGHA 398
Query: 415 KEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTC 473
K + F + G RPD +F+ L C H G + G +FF+ M + + PS++HY C
Sbjct: 399 KAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGC 458
Query: 474 MVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNN 533
MVDLL RAG L EA++ I +PM P++V+WGALLGGC H + + +LIELEP N
Sbjct: 459 MVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLIELEPWN 518
Query: 534 TGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRS 593
+GNYV L+N+++ RW + + R MK++++ K CSWIE +H+F D+SH S
Sbjct: 519 SGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQKIRACSWIEIDGIVHEFLVGDKSHWLS 578
Query: 594 EEIYTIID 601
E+IY +D
Sbjct: 579 EKIYAKLD 586
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 176/353 (49%), Gaps = 8/353 (2%)
Query: 164 NTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLM 223
N I+ + G+ ++ +F Q++ + I WN+MI G V +D+A ++ M
Sbjct: 52 NLILCCALDFGSTNYSKLVFSQVK----EPNIFLWNTMIRGLVSKDCFDDAIHLYGS--M 105
Query: 224 R-DGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDL 282
R G P +FT VL ACA +R G +IH+L + G D FV +L+ +Y + +
Sbjct: 106 RGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNF 165
Query: 283 VAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSAC 342
A FD+I + + G+ + + A+ F ++L + L PD +++ +L+AC
Sbjct: 166 DDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAAC 225
Query: 343 SSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQN 402
+ L G+ + Y G +V + T+L+DMY KCG+L+ A L + + D+VS +
Sbjct: 226 ARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWS 285
Query: 403 AMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYY 462
M+ YA +G ++ + F ++ + +PD + + LSAC G++ G LM
Sbjct: 286 TMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRN 345
Query: 463 DVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
+ + T ++D+ S+ G + +A+E + D V+W A++ G +G+
Sbjct: 346 EFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMK-RKDRVVWNAMMVGLSMNGH 397
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 106/414 (25%), Positives = 171/414 (41%), Gaps = 76/414 (18%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KC + DDA KVF +P+++ VSW +++T
Sbjct: 158 LYVKCDNFDDALKVFDDIPDKNVVSWTAIIT----------------------------- 188
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
G+ +G+ EAIG ++ GL+P++ +L VL ACARL + G+ YI
Sbjct: 189 -------GYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYI 241
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ +G N FV L+D+Y +CG++ A IFS K+ VS +T+I GY NG +A
Sbjct: 242 SDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQAL 301
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+LF QM+ + ++P +T VL A
Sbjct: 302 DLFFQMQ------------------------------------SENLKPDCYTMVGVLSA 325
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA + +L G +L S+ +G AL++MY + + A F ++ + ++
Sbjct: 326 CATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKRKDRVVW 385
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G N + LFS + + PD T +L C+ + G+Q R
Sbjct: 386 NAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKR 445
Query: 361 CG--YDSDVHIGTALVDMYAKCGSLKHA-RLAYKRISTPDLVSQNAMLTAYAMH 411
S H G +VD+ + G L A +L P+ V A+L +H
Sbjct: 446 VFSLTPSIEHYG-CMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLH 498
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 133/296 (44%), Gaps = 39/296 (13%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG+L+ A +F MPE+D +V
Sbjct: 259 MYVKCGNLERANLIFSAMPEKD------------------------------------IV 282
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SWS +I G+ NG ++A+ + F+MQ+E L+P+ T+ VL ACA L L LG +
Sbjct: 283 SWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLM 342
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
RN F+SNP + L+D+Y +CG + A +IF+ K+ V N ++VG NG+
Sbjct: 343 DRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKRKDRVVWNAMMVGLSMNGHAKAVF 402
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LF +E G++ ++ ++ G +E F ++ + P+ +G ++
Sbjct: 403 SLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDL 462
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
L E H L + ++ + V GAL+ ++D A+ ++ +E
Sbjct: 463 LGRAGLL---NEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLIELE 515
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 144/339 (42%), Gaps = 38/339 (11%)
Query: 229 PTSFTFGSVL----IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVA 284
PTS F L +N + K IHA + L L D ++ ++ +
Sbjct: 7 PTSPVFSKALEIKNYLSNGLNFFNQLKHIHARLLRLHLDQDNYLLNLILCCALDFGSTNY 66
Query: 285 AQMAFDEIENIENLLGKMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTP 330
+++ F +++ EPN++ WN M L+ M P
Sbjct: 67 SKLVFSQVK--------------EPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLP 112
Query: 331 DIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAY 390
+ +T+ +L AC+ + G ++H+ ++ GYD DV + T+L+ +Y KC + A +
Sbjct: 113 NNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVF 172
Query: 391 KRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIK 450
I ++VS A++T Y GH +E I F+++L G +PD S + L+AC G
Sbjct: 173 DDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCT 232
Query: 451 TGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGC 510
+G ++ + ++ T ++D+ + G L A +P D V W ++ G
Sbjct: 233 SGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMP-EKDIVSWSTMIQGY 291
Query: 511 VSHGNLEFGQIAADRLIELEPNNTGN--YVMLANLFAYA 547
+G Q A D +++ N Y M+ L A A
Sbjct: 292 AFNG---LPQQALDLFFQMQSENLKPDCYTMVGVLSACA 327
>gi|359488555|ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like, partial [Vitis vinifera]
Length = 825
Score = 331 bits (848), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 187/592 (31%), Positives = 322/592 (54%), Gaps = 45/592 (7%)
Query: 13 KVFKMMPERDCVSWNSVVTA-CAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQ 71
++ K+ + + N++V + C +N L L A + + M +D+ VS++A+I G+++
Sbjct: 174 QIIKLGYDSRLIVGNTLVDSYCKSNRLDL-ACQLFKEMPEIDS-----VSYNAMITGYSK 227
Query: 72 NGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFV 131
+G DE+A+ + MQ GL+P T ++VL A L + LG++ H ++ + F+ N FV
Sbjct: 228 DGLDEKAVNLFVEMQNSGLKPTEFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFV 287
Query: 132 VNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGV 191
N L+D Y + + +V +AR+LFD+M
Sbjct: 288 SNALLDFYSK-------------------------------HDSVIDARKLFDEMPE--- 313
Query: 192 QRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGK 251
Q G+ S+N +ISGY + + AF +FR+L + F F ++L ++ G+
Sbjct: 314 QDGV-SYNVIISGYAWDGKHKYAFDLFRELQF-TAFDRKQFPFATMLSIASNTLDWEMGR 371
Query: 252 EIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNV 311
+IHA I S+ VG +LV+MY + A+M F + + + +
Sbjct: 372 QIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKG 431
Query: 312 YTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGT 371
+ +QLF++M + D T +L A +S+A++ GKQ+H++ I+ G+ S+V G+
Sbjct: 432 FYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGS 491
Query: 372 ALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRP 431
AL+D+YAKCGS+K A ++ + ++VS NAM++AYA +G + + F+ ++ SG +P
Sbjct: 492 ALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQP 551
Query: 432 DHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLLSRAGELGEAYEF 490
D +SFL LSAC H+G ++ G F+ M Y + P +HY +VD+L R+G EA +
Sbjct: 552 DSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKL 611
Query: 491 IKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEP-NNTGNYVMLANLFAYAGR 549
+ ++P+ PD +MW ++L C H N E + AAD+L +E + YV ++N++A AG+
Sbjct: 612 MAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQ 671
Query: 550 WSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
W ++++ + M+DR + K P SW+E + E H F A+DR H + EEI ID
Sbjct: 672 WENVSKVHKAMRDRGVKKLPAYSWVEIKHETHMFSANDRCHPQIEEIRKKID 723
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 131/523 (25%), Positives = 238/523 (45%), Gaps = 60/523 (11%)
Query: 4 KCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWS 63
K G L A+++F+ MP ++ VS N +++ +G + EA + + M V+W+
Sbjct: 64 KNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGNLGEARKLFDGMVE-----RTAVTWT 118
Query: 64 AVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRN 123
+IGG++Q +EA + +MQ G EP+ T ++L C + + + I +
Sbjct: 119 ILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKL 178
Query: 124 GFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELF 183
G+ S V N LVD Y + + A ++F + + VS N +I GY ++G +A LF
Sbjct: 179 GYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLF 238
Query: 184 DQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACAD 243
+M++ G++PT FTF +VL A
Sbjct: 239 VEMQN------------------------------------SGLKPTEFTFAAVLCANIG 262
Query: 244 MNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMK 303
++ + G++IH+ I + FV AL++ Y ++ ++ A+ FDE+ +
Sbjct: 263 LDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMP---------E 313
Query: 304 EDGFEPNV----YTWN-----AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV 354
+DG NV Y W+ A LF E+ + +LS S+ E G+Q+
Sbjct: 314 QDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQI 373
Query: 355 HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHG 414
HA I DS++ +G +LVDMYAKCG + A + + ++ V AM++AY G
Sbjct: 374 HAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFY 433
Query: 415 KEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCM 474
+EG+ F ++ + D +F S L A S+ G + + ++ + +
Sbjct: 434 EEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSAL 493
Query: 475 VDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
+D+ ++ G + +A + +++P + V W A++ +G E
Sbjct: 494 LDVYAKCGSIKDAVQTFQEMP-DRNIVSWNAMISAYAQNGEAE 535
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 114/411 (27%), Positives = 187/411 (45%), Gaps = 6/411 (1%)
Query: 109 KLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIV 168
+L++ I + GF + N V + + G++ A ++F K KN VS N +I
Sbjct: 32 RLNVVNNIDARIVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMIS 91
Query: 169 GYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIE 228
GY ++GN+ EAR+LFD M V+R ++W +I GY + + EAF +F + R G E
Sbjct: 92 GYVKSGNLGEARKLFDGM----VERTAVTWTILIGGYSQLNQFKEAFELFVQM-QRCGTE 146
Query: 229 PTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMA 288
P TF ++L C + ++ I LG S VG LV+ YC+ L A
Sbjct: 147 PDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQL 206
Query: 289 FDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATM 348
F E+ I+++ G+ + A+ LF EM + L P +T +L A L +
Sbjct: 207 FKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVLCANIGLDDI 266
Query: 349 ERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAY 408
G+Q+H++ I+ + +V + AL+D Y+K S+ AR + + D VS N +++ Y
Sbjct: 267 VLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGY 326
Query: 409 AMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSL 468
A G K FR + + F F + LS + + G + +
Sbjct: 327 AWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEI 386
Query: 469 KHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFG 519
+VD+ ++ G+ EA E I +V W A++ V G E G
Sbjct: 387 LVGNSLVDMYAKCGKFEEA-EMIFTNLTHRSAVPWTAMISAYVQKGFYEEG 436
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 136/301 (45%), Gaps = 45/301 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG ++A+ +F + R V W ++++A G E L+ +M
Sbjct: 395 MYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMR---------- 444
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
QA + A T +S+L A A + LSLGK+ H +I
Sbjct: 445 -------------------------QASVIADQA-TFASLLRASASIASLSLGKQLHSFI 478
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
++GFMSN F + L+DVY +CG + A++ F + +N VS N +I Y +NG
Sbjct: 479 IKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATL 538
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+ F +M G+Q +S+ ++S + L +E F + ++P + SV+
Sbjct: 539 KSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVV-- 596
Query: 241 CADMNSLRKGK--EIHALAIALGLQSDTFVGGALVEMYCR-YQDLVAAQMAFDEIENIEN 297
DM R G+ E L + + D + +++ CR +++ A+ A D++ N+E
Sbjct: 597 --DM-LCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNA-CRIHKNQELARRAADQLFNMEE 652
Query: 298 L 298
L
Sbjct: 653 L 653
>gi|356509350|ref|XP_003523413.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g77010, mitochondrial-like [Glycine max]
Length = 678
Score = 331 bits (848), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 201/641 (31%), Positives = 332/641 (51%), Gaps = 74/641 (11%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMS---------- 50
+Y +C +L DA +F MP+ + SWN++V A +G AL M
Sbjct: 45 LYSRCRNLQDASHLFDEMPQTNSFSWNTLVQAHLNSGHTHSALHLFNAMPHKTHFSWNMV 104
Query: 51 --------------SLDNETP--NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEP-- 92
SL N P N + W+++I ++++G+ +A LF ++ L+P
Sbjct: 105 VSAFAKSGHLQLAHSLFNAMPSKNHLVWNSIIHSYSRHGHPGKA---LFLFKSMNLDPSQ 161
Query: 93 ----NARTLSSVLPACARLQKLSLGKEFHG--YITRNGFMSNPFVVNGLVDVYRRCGDML 146
+A L++ L ACA L+ GK+ H ++ G + + + L+++Y +CGD+
Sbjct: 162 IVYRDAFVLATALGACADSLALNCGKQVHARVFVDGMGLELDRVLCSSLINLYGKCGDLD 221
Query: 147 SALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYV 206
SA +I S +E S + +I GY G + EAR +FD V + WNS+ISGYV
Sbjct: 222 SAARIVSFVRDVDEFSLSALISGYANAGRMREARSVFDS----KVDPCAVLWNSIISGYV 277
Query: 207 DNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDT 266
N EA ++F +L R+G++ + ++L A + + + K++H A G+ D
Sbjct: 278 SNGEEVEAVNLFSAML-RNGVQGDASAVANILSAASGLLVVELVKQMHVYACKAGVTHDI 336
Query: 267 FVGGALVEMYCRYQDLVAAQMAFDEIENIENLL-----------GKMKEDGFEPN----- 310
V +L++ Y + Q A F E++ + +L G++++ N
Sbjct: 337 VVASSLLDAYSKCQSPCEACKLFSELKEYDTILLNTMITVYSNCGRIEDAKLIFNTMPSK 396
Query: 311 -VYTWN--------------AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVH 355
+ +WN A+ +FS+M LDL D ++ ++SAC+ +++E G+QV
Sbjct: 397 TLISWNSILVGLTQNACPSEALNIFSQMNKLDLKMDRFSFASVISACACRSSLELGEQVF 456
Query: 356 AYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGK 415
AI G +SD I T+LVD Y KCG ++ R + + D VS N ML YA +G+G
Sbjct: 457 GKAITIGLESDQIISTSLVDFYCKCGFVEIGRKVFDGMVKTDEVSWNTMLMGYATNGYGI 516
Query: 416 EGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCM 474
E + F + G P I+F LSAC H+G ++ G F M + Y++ P ++H++CM
Sbjct: 517 EALTLFCEMTYGGVWPSAITFTGVLSACDHSGLVEEGRNLFHTMKHSYNINPGIEHFSCM 576
Query: 475 VDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNT 534
VDL +RAG EA + I+++P D+ MW ++L GC++HGN G++AA+++I+LEP NT
Sbjct: 577 VDLFARAGYFEEAMDLIEEMPFQADANMWLSVLRGCIAHGNKTIGKMAAEQIIQLEPENT 636
Query: 535 GNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIE 575
G Y+ L+N+ A +G W A R+ M+D+ K PGCSW +
Sbjct: 637 GAYIQLSNILASSGDWEGSALVRELMRDKHFQKIPGCSWAD 677
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 114/503 (22%), Positives = 204/503 (40%), Gaps = 109/503 (21%)
Query: 113 GKEFHGYITRNGFM-SNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYC 171
G++ H + G + S+ V N L+ +Y RC ++ A +F + N S NT++ +
Sbjct: 19 GRQLHVAFLKTGILNSSVAVANRLLQLYSRCRNLQDASHLFDEMPQTNSFSWNTLVQAHL 78
Query: 172 ENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRD------ 225
+G+ A LF+ M H + SWN ++S + + A S+F + ++
Sbjct: 79 NSGHTHSALHLFNAMPH----KTHFSWNMVVSAFAKSGHLQLAHSLFNAMPSKNHLVWNS 134
Query: 226 ---------------------GIEPT------SFTFGSVLIACADMNSLRKGKEIHALAI 258
++P+ +F + L ACAD +L GK++HA
Sbjct: 135 IIHSYSRHGHPGKALFLFKSMNLDPSQIVYRDAFVLATALGACADSLALNCGKQVHARVF 194
Query: 259 --ALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL-----------LGKMKE- 304
+GL+ D + +L+ +Y + DL +A + +++ G+M+E
Sbjct: 195 VDGMGLELDRVLCSSLINLYGKCGDLDSAARIVSFVRDVDEFSLSALISGYANAGRMREA 254
Query: 305 -----DGFEPNVYTWN--------------AMQLFSEMLSLDLTPDIYTVGIILSACSSL 345
+P WN A+ LFS ML + D V ILSA S L
Sbjct: 255 RSVFDSKVDPCAVLWNSIISGYVSNGEEVEAVNLFSAMLRNGVQGDASAVANILSAASGL 314
Query: 346 ATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAK-------------------------- 379
+E KQ+H YA + G D+ + ++L+D Y+K
Sbjct: 315 LVVELVKQMHVYACKAGVTHDIVVASSLLDAYSKCQSPCEACKLFSELKEYDTILLNTMI 374
Query: 380 -----CGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHI 434
CG ++ A+L + + + L+S N++L + E + F ++ + D
Sbjct: 375 TVYSNCGRIEDAKLIFNTMPSKTLISWNSILVGLTQNACPSEALNIFSQMNKLDLKMDRF 434
Query: 435 SFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAG--ELG-EAYEFI 491
SF S +SAC S++ G + F ++ T +VD + G E+G + ++ +
Sbjct: 435 SFASVISACACRSSLELGEQVFGKAITIGLESDQIISTSLVDFYCKCGFVEIGRKVFDGM 494
Query: 492 KKIPMAPDSVMWGALLGGCVSHG 514
K D V W +L G ++G
Sbjct: 495 VK----TDEVSWNTMLMGYATNG 513
>gi|86438643|emb|CAJ26357.1| Selenium binding protein [Brachypodium sylvaticum]
Length = 624
Score = 330 bits (847), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 174/512 (33%), Positives = 275/512 (53%), Gaps = 36/512 (7%)
Query: 90 LEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSAL 149
L P R + + ACA+ + L ++ HG++ + F + F+ N L+ +Y +C
Sbjct: 47 LAPTPRVYHAFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKC------- 99
Query: 150 KIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNS 209
G+V EA ++FD+M ++ ++SW S+I+GY N
Sbjct: 100 ------------------------GSVVEAHKVFDKMR----KKDMVSWTSLIAGYAQND 131
Query: 210 LYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVG 269
+ EA + +L + +P FTF S+L A G +IHALA+ D +VG
Sbjct: 132 MPAEAIGLLPGML-KGRFKPNGFTFASLLKAAGAYADSGIGGQIHALAVKCDWHEDVYVG 190
Query: 270 GALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLT 329
AL++MY R + A FD++++ + GF A+ +F+EM
Sbjct: 191 SALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMVFAEMQRNGFE 250
Query: 330 PDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLA 389
+T I S + + +E+GK VHA+ ++ +G ++DMYAK GS+ AR
Sbjct: 251 ATHFTYSSIFSGLAGIGALEQGKWVHAHMVKSRQKLTAFVGNTMLDMYAKSGSMIDARKV 310
Query: 390 YKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSI 449
++R+ DLV+ N+MLTA+A +G GKE ++HF + SG + I+FL L+AC H G +
Sbjct: 311 FERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQITFLCILTACSHGGLV 370
Query: 450 KTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
K G +FD++ Y+++P ++HY +VDLL RAG L A FI K+PM P + +WGALL
Sbjct: 371 KEGKHYFDMIKEYNLEPEIEHYVTVVDLLGRAGLLNYALVFIFKMPMEPTAAVWGALLAA 430
Query: 510 CVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSP 569
C H N + GQ AAD + +L+P+++G V+L N++A G W AR R+ MK + K P
Sbjct: 431 CRMHKNAKVGQFAADHVFQLDPDDSGPPVLLYNIYASTGHWDAAARVRKMMKATGVKKEP 490
Query: 570 GCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
CSW+E + +H F A+D +H R+EEIY + D
Sbjct: 491 ACSWVEIGNSVHMFVANDDTHPRAEEIYKMWD 522
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 106/416 (25%), Positives = 178/416 (42%), Gaps = 46/416 (11%)
Query: 7 SLDDAKKVFKMMP----ERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSW 62
+LDDA+K+ + E D NS++ G V+EA + ++M D +VSW
Sbjct: 66 NLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEAHKVFDKMRKKD-----MVSW 120
Query: 63 SAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITR 122
+++I G+ QN EAIG+L M +PN T +S+L A +G + H +
Sbjct: 121 TSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGIGGQIHALAVK 180
Query: 123 NGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAREL 182
+ + +V + L+D+Y RCG M A +F K KN VS N +I G+ G+ A +
Sbjct: 181 CDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMV 240
Query: 183 FDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACA 242
F +M+ R+G E T FT+ S+ A
Sbjct: 241 FAEMQ------------------------------------RNGFEATHFTYSSIFSGLA 264
Query: 243 DMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKM 302
+ +L +GK +HA + + FVG +++MY + ++ A+ F+ + N + +
Sbjct: 265 GIGALEQGKWVHAHMVKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNS 324
Query: 303 KEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCG 362
F A+ F EM + + T IL+ACS ++ GK
Sbjct: 325 MLTAFAQYGLGKEAVSHFEEMRKSGIYLNQITFLCILTACSHGGLVKEGKHYFDMIKEYN 384
Query: 363 YDSDVHIGTALVDMYAKCGSLKHARL-AYKRISTPDLVSQNAMLTAYAMHGHGKEG 417
+ ++ +VD+ + G L +A + +K P A+L A MH + K G
Sbjct: 385 LEPEIEHYVTVVDLLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMHKNAKVG 440
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 112/256 (43%), Gaps = 35/256 (13%)
Query: 55 ETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGK 114
++ N VSW+A+I GF + G E A+ + MQ G E T SS+ A + L GK
Sbjct: 214 DSKNGVSWNALISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGK 273
Query: 115 EFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
H ++ ++ FV N ++D+Y + G M+ A K+F + K+ V+ N+++ + + G
Sbjct: 274 WVHAHMVKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYG 333
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEA---FSMFR------------ 219
EA F++M G+ I++ +++ L E F M +
Sbjct: 334 LGKEAVSHFEEMRKSGIYLNQITFLCILTACSHGGLVKEGKHYFDMIKEYNLEPEIEHYV 393
Query: 220 ---DLLMRDGI-------------EPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQ 263
DLL R G+ EPT+ +G++L AC + K ++ A Q
Sbjct: 394 TVVDLLGRAGLLNYALVFIFKMPMEPTAAVWGALLAAC----RMHKNAKVGQFAADHVFQ 449
Query: 264 SDTFVGGALVEMYCRY 279
D G V +Y Y
Sbjct: 450 LDPDDSGPPVLLYNIY 465
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 86/207 (41%), Gaps = 43/207 (20%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLD------- 53
MY K GS+ DA+KVF+ + +D V+WNS++TA A GL EA+ E M
Sbjct: 297 MYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQIT 356
Query: 54 ---------------------------NETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQ 86
N P + + V+ + G A+ +F+M
Sbjct: 357 FLCILTACSHGGLVKEGKHYFDMIKEYNLEPEIEHYVTVVDLLGRAGLLNYALVFIFKMP 416
Query: 87 AEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITR-NGFMSNPFVVNGLVDVYRRCGDM 145
+EP A ++L AC + +G+ ++ + + S P V+ L ++Y G
Sbjct: 417 ---MEPTAAVWGALLAACRMHKNAKVGQFAADHVFQLDPDDSGPPVL--LYNIYASTGHW 471
Query: 146 LSAL---KIFSKFSIKNEVSCNTIIVG 169
+A K+ +K E +C+ + +G
Sbjct: 472 DAAARVRKMMKATGVKKEPACSWVEIG 498
>gi|15240591|ref|NP_196831.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181128|sp|Q9LYU9.1|PP378_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g13270, chloroplastic; Flags: Precursor
gi|7529282|emb|CAB86634.1| putative protein [Arabidopsis thaliana]
gi|332004490|gb|AED91873.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 752
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 183/599 (30%), Positives = 307/599 (51%), Gaps = 74/599 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +C SL+DA K+F M E N V
Sbjct: 127 MYCECRSLEDADKLFDEMSEL------------------------------------NAV 150
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
S + +I + + G ++A+G+ M A G +P + +++L + + L G++ H ++
Sbjct: 151 SRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHV 210
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R G SN + G+V++Y +CG ++ A ++F + ++K V+C ++VGY + G +A
Sbjct: 211 IRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDAL 270
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+LF VD L+ +G+E SF F VL A
Sbjct: 271 KLF----------------------VD--------------LVTEGVEWDSFVFSVVLKA 294
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA + L GK+IHA LGL+S+ VG LV+ Y + +A AF EI ++
Sbjct: 295 CASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSW 354
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTP-DIYTVGIILSACSSLATMERGKQVHAYAI 359
G+ A++ F + S + + + +T I ACS LA G QVHA AI
Sbjct: 355 SAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAI 414
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
+ + +AL+ MY+KCG L A ++ + PD+V+ A ++ +A +G+ E +
Sbjct: 415 KRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALR 474
Query: 420 HFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMVDLL 478
F ++++ G +P+ ++F++ L+AC HAG ++ G D M Y+V P++ HY CM+D+
Sbjct: 475 LFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIY 534
Query: 479 SRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYV 538
+R+G L EA +F+K +P PD++ W L GC +H NLE G+IA + L +L+P +T YV
Sbjct: 535 ARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYV 594
Query: 539 MLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
+ NL+ +AG+W + A + M +R + K CSWI+++ +IH+F D+ H +++EIY
Sbjct: 595 LPFNLYTWAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEIY 653
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 122/491 (24%), Positives = 222/491 (45%), Gaps = 73/491 (14%)
Query: 77 EAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVV--NG 134
EA L M G+ ++ + + AC L+ LS G+ H + R G + NP V+ N
Sbjct: 66 EAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRM-RMG-IENPSVLLQNC 123
Query: 135 LVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRG 194
++ +Y C + A K+F + S N VS T+I Y E G
Sbjct: 124 VLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQG-------------------- 163
Query: 195 IISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIH 254
+ D+A +F +L G +P S + ++L + + +L G++IH
Sbjct: 164 ---------------ILDKAVGLFSGMLA-SGDKPPSSMYTTLLKSLVNPRALDFGRQIH 207
Query: 255 ALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTW 314
A I GL S+T + +V MY + LV A+ FD++ + + G+
Sbjct: 208 AHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRAR 267
Query: 315 NAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALV 374
+A++LF ++++ + D + ++L AC+SL + GKQ+HA + G +S+V +GT LV
Sbjct: 268 DALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLV 327
Query: 375 DMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRP-DH 433
D Y KC S + A A++ I P+ VS +A+++ Y +E + F+ + + +
Sbjct: 328 DFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNS 387
Query: 434 ISFLSALSAC-----------VHAGSIK---TGSEFFDLMAYYDVKPSLKHYTCMVDLLS 479
++ S AC VHA +IK GS++ + + ++ + S
Sbjct: 388 FTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGE--------------SALITMYS 433
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIE--LEPNNTGNY 537
+ G L +A E + + PD V W A + G +GN ++++ ++PN+ +
Sbjct: 434 KCGCLDDANEVFESMD-NPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSV-TF 491
Query: 538 VMLANLFAYAG 548
+ + ++AG
Sbjct: 492 IAVLTACSHAG 502
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 137/299 (45%), Gaps = 4/299 (1%)
Query: 212 DEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDT-FVGG 270
+EAF +++ + G+ +S+++ + AC ++ SL G+ +H + +G+++ + +
Sbjct: 65 NEAFEFLQEM-DKAGVSVSSYSYQCLFEACRELRSLSHGRLLHD-RMRMGIENPSVLLQN 122
Query: 271 ALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTP 330
+++MYC + L A FDE+ + + + A+ LFS ML+ P
Sbjct: 123 CVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKP 182
Query: 331 DIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAY 390
+L + + ++ G+Q+HA+ IR G S+ I T +V+MY KCG L A+ +
Sbjct: 183 PSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVF 242
Query: 391 KRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIK 450
+++ V+ ++ Y G ++ + F ++ G D F L AC +
Sbjct: 243 DQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELN 302
Query: 451 TGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
G + +A ++ + T +VD + A ++I P+ V W A++ G
Sbjct: 303 LGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEI-REPNDVSWSAIISG 360
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 118/301 (39%), Gaps = 63/301 (20%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNS-------------------------------- 28
MY KCG LDDA +VF+ M D V+W +
Sbjct: 431 MYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVT 490
Query: 29 ---VVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRM 85
V+TAC+ GLV + CL+ M N P + + +I + ++G +EA+ + M
Sbjct: 491 FIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNM 550
Query: 86 QAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRN-------GFMSNPFVVNGLVDV 138
EP+A + L C + L LG E G R G++ PF +
Sbjct: 551 P---FEPDAMSWKCFLSGCWTHKNLELG-EIAGEELRQLDPEDTAGYVL-PFNLYTWAGK 605
Query: 139 YRRCGDMLSALKIFSKFSIKNEVSCNTI---------IVGYCENGNVAEARELFDQMEHL 189
+ +M +K+ ++ +K E+SC+ I IVG + + + +E++++++
Sbjct: 606 WEEAAEM---MKLMNERMLKKELSCSWIQEKGKIHRFIVG---DKHHPQTQEIYEKLKEF 659
Query: 190 -GVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLR 248
G G + +M + E ++ L+ G P L AC D +
Sbjct: 660 DGFMEGDMFQCNMTERREQLLDHSERLAIAFGLISVHGNAPAPIKVFKNLRACPDCHEFA 719
Query: 249 K 249
K
Sbjct: 720 K 720
>gi|413920851|gb|AFW60783.1| hypothetical protein ZEAMMB73_487264 [Zea mays]
Length = 770
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 185/613 (30%), Positives = 308/613 (50%), Gaps = 85/613 (13%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y +CG+ DA+ +F MPE+ N+V+
Sbjct: 123 YMRCGASQDARSLFDQMPEK------------------------------------NVVT 146
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W+A+I G+T N EA+ + M G P+ TL ++L AC+ LG + HGY
Sbjct: 147 WTALITGYTVNSQLLEALEVFVEMLEAGRYPSHYTLGAMLNACSASNNADLGSQVHGYTI 206
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
+ +S + N L +Y + G + SA++ F KN
Sbjct: 207 KYRALSITSIGNSLCRMYAKSGSLESAMRAFRMVPDKN---------------------- 244
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDE-AFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+I+W +MIS ++ Y E ++F D+LM DG+ P FT SV+
Sbjct: 245 -------------VITWTTMISACAEDENYTELGLTLFLDMLM-DGVLPNEFTLTSVMSL 290
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL-- 298
C L GK++ A +G Q++ V + + +Y R + A F+E++++ +
Sbjct: 291 CGTRLDLNLGKQVQAFCFKIGCQTNIPVKNSTMYLYLRKGETDEAMRFFEEMDDVSIITW 350
Query: 299 ---------LGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATME 349
+ + +D + A+++F + + PD++T ILS CSS+ +E
Sbjct: 351 NAMISGYAQIMETAKDDLHARSRGFQALKVFRNLKRSAMKPDLFTFSSILSVCSSMMALE 410
Query: 350 RGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYA 409
+G+Q+HA I+ G+ SDV + +ALV+MY KCG ++ A A+ +S LV+ +M++ Y+
Sbjct: 411 QGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIEDATKAFVEMSIRTLVTWTSMISGYS 470
Query: 410 MHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSL 468
HG +E I F + +G RP+ I+F+ LSAC +AG + +FD+M Y ++P +
Sbjct: 471 QHGRPQEAIQLFEDMRFAGVRPNEITFVCVLSACSYAGLAEKAEHYFDMMKEEYKIEPIV 530
Query: 469 KHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIE 528
HY CMVD+ R G L +A+ FI++ P+ +W +L+ GC SHGN+E AADRLIE
Sbjct: 531 DHYGCMVDMFVRLGRLDDAFAFIRRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADRLIE 590
Query: 529 LEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDR 588
L P YV+L N++ RW D+AR R+ MK + SWI +D+++ F+A+D+
Sbjct: 591 LRPKGIETYVLLLNMYISNERWHDVARVRKLMKQEGLGVLMDRSWITIKDKVYFFKANDK 650
Query: 589 SHDRSEEIYTIID 601
+H+ S+E+Y +++
Sbjct: 651 THELSDELYQLLE 663
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 127/510 (24%), Positives = 224/510 (43%), Gaps = 82/510 (16%)
Query: 71 QNGYDEEA------IGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNG 124
QNG EA +G M EG + +L C L + HG++ + G
Sbjct: 49 QNGSTMEAPLRPLDVGEAMAMLREGKTVQSAMYVPLLHVCVETGSLGGARALHGHMVKTG 108
Query: 125 FMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFD 184
++ FV LV+ Y RCG +AR LFD
Sbjct: 109 TSADMFVATSLVNAYMRCG-------------------------------ASQDARSLFD 137
Query: 185 QMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADM 244
QM ++ +++W ++I+GY NS EA +F ++L G P+ +T G++L AC+
Sbjct: 138 QMP----EKNVVTWTALITGYTVNSQLLEALEVFVEML-EAGRYPSHYTLGAMLNACSAS 192
Query: 245 NSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL--GKM 302
N+ G ++H I S T +G +L MY + L +A AF + + +N++ M
Sbjct: 193 NNADLGSQVHGYTIKYRALSITSIGNSLCRMYAKSGSLESAMRAFRMVPD-KNVITWTTM 251
Query: 303 KEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCG 362
E YT + LF +ML + P+ +T+ ++S C + + GKQV A+ + G
Sbjct: 252 ISACAEDENYTELGLTLFLDMLMDGVLPNEFTLTSVMSLCGTRLDLNLGKQVQAFCFKIG 311
Query: 363 YDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYA---------MHG- 412
+++ + + + +Y + G A ++ + +++ NAM++ YA +H
Sbjct: 312 CQTNIPVKNSTMYLYLRKGETDEAMRFFEEMDDVSIITWNAMISGYAQIMETAKDDLHAR 371
Query: 413 -HGKEGIAHFRRILASGFRPDHISFLSALSAC-----------VHAGSIKTGSEFFDLMA 460
G + + FR + S +PD +F S LS C +HA +IKTG F
Sbjct: 372 SRGFQALKVFRNLKRSAMKPDLFTFSSILSVCSSMMALEQGEQIHAQTIKTG--FLS--- 426
Query: 461 YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN-LEFG 519
DV + + +V++ ++ G + +A + ++ + V W +++ G HG E
Sbjct: 427 --DVVVN----SALVNMYNKCGCIEDATKAFVEMSIR-TLVTWTSMISGYSQHGRPQEAI 479
Query: 520 QIAAD-RLIELEPNNTGNYVMLANLFAYAG 548
Q+ D R + PN +V + + +YAG
Sbjct: 480 QLFEDMRFAGVRPNEI-TFVCVLSACSYAG 508
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 111/430 (25%), Positives = 180/430 (41%), Gaps = 92/430 (21%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K GSL+ A + F+M+P+++ ++W ++++ACA +
Sbjct: 223 MYAKSGSLESAMRAFRMVPDKNVITWTTMISACAED------------------------ 258
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
Y E + + M +G+ PN TL+SV+ C L+LGK+ +
Sbjct: 259 -----------ENYTELGLTLFLDMLMDGVLPNEFTLTSVMSLCGTRLDLNLGKQVQAFC 307
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G +N V N + +Y R G+ A++ F + ++VS
Sbjct: 308 FKIGCQTNIPVKNSTMYLYLRKGETDEAMRFFEEM---DDVS------------------ 346
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVD-----------NSLYDEAFSMFRDLLMRDGIEP 229
II+WN+MISGY S +A +FR+ L R ++P
Sbjct: 347 --------------IITWNAMISGYAQIMETAKDDLHARSRGFQALKVFRN-LKRSAMKP 391
Query: 230 TSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAF 289
FTF S+L C+ M +L +G++IHA I G SD V ALV MY + + A AF
Sbjct: 392 DLFTFSSILSVCSSMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIEDATKAF 451
Query: 290 DEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATME 349
E+ + G+ + A+QLF +M + P+ T +LSACS E
Sbjct: 452 VEMSIRTLVTWTSMISGYSQHGRPQEAIQLFEDMRFAGVRPNEITFVCVLSACSYAGLAE 511
Query: 350 RGKQV-----HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNA 403
+ + Y I D H G +VDM+ + G L A +R P+ ++
Sbjct: 512 KAEHYFDMMKEEYKIEPIVD---HYG-CMVDMFVRLGRLDDAFAFIRRTGFEPNEAIWSS 567
Query: 404 MLTAYAMHGH 413
++ HG+
Sbjct: 568 LVAGCRSHGN 577
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 104/245 (42%), Gaps = 21/245 (8%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG ++DA K F M R V+W S+++ + +G EA++ E M PN +
Sbjct: 437 MYNKCGCIEDATKAFVEMSIRTLVTWTSMISGYSQHGRPQEAIQLFEDM-RFAGVRPNEI 495
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
++ V+ + G E+A M+ E +EP ++ RL +L + +
Sbjct: 496 TFVCVLSACSYAGLAEKAEHYFDMMKEEYKIEPIVDHYGCMVDMFVRLGRLD---DAFAF 552
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIV---GYCEN--- 173
I R GF N + + LV R G+M A + T ++ Y N
Sbjct: 553 IRRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADRLIELRPKGIETYVLLLNMYISNERW 612
Query: 174 GNVAEARELFDQMEHLGV--QRGIISWNSMISGYVDN----SLYDEAFSMFRDLLMRD-- 225
+VA R+L Q E LGV R I+ + + N L DE + + +LL +
Sbjct: 613 HDVARVRKLMKQ-EGLGVLMDRSWITIKDKVYFFKANDKTHELSDELYQLLENLLEKAKT 671
Query: 226 -GIEP 229
G EP
Sbjct: 672 IGYEP 676
>gi|108711755|gb|ABF99550.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215697380|dbj|BAG91374.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 646
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 170/504 (33%), Positives = 281/504 (55%), Gaps = 9/504 (1%)
Query: 94 ARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFS 153
AR S + AC L+ L ++ H + +G ++ F N L+ Y GD+ +A ++F
Sbjct: 44 ARLFSHLFRACRALRPL---RQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFE 100
Query: 154 KFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDE 213
+ +N +S N + GY +NG++ AR+LFD+M +R + +WN+M++G + +E
Sbjct: 101 RIPRRNVMSWNILFGGYIKNGDLGGARKLFDEMP----ERNVATWNAMVAGLTNLGFDEE 156
Query: 214 AFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALV 273
+ F D+ R+G+ P F GSV CA + + G+++HA + GL D VG +L
Sbjct: 157 SLGFFLDM-RREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLA 215
Query: 274 EMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIY 333
MY R L + + ++ + G N + A++ F M S+ + D+
Sbjct: 216 HMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVV 275
Query: 334 TVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRI 393
T +S+CS LA + +G+Q+H ++ G D V + T LV MY++CG L + +
Sbjct: 276 TFVSAISSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGY 335
Query: 394 STPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGS 453
D +AM++AY HGHG++ I F++++ G P ++FL+ L AC H+G + G
Sbjct: 336 CGSDTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGM 395
Query: 454 EFFDLMA-YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVS 512
+ F+LM Y ++PS+KHYTC+VDLL R+G L EA I +P+ PD V+W LL C +
Sbjct: 396 DCFELMTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKT 455
Query: 513 HGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCS 572
N + + A R+IEL+P+++ +YV+L+N+ A + RW D++ R+ M+D + K PG S
Sbjct: 456 QKNFDMAERIAKRVIELDPHDSASYVLLSNIRATSRRWGDVSEVRKAMRDNNVRKEPGVS 515
Query: 573 WIEDRDEIHKFRASDRSHDRSEEI 596
W+E + IH+F D SH R +EI
Sbjct: 516 WVELKGHIHQFCTGDESHPRQKEI 539
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 107/408 (26%), Positives = 175/408 (42%), Gaps = 43/408 (10%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y G L A+++F+ +P R+ +SWN + NG + A + + M N+ +
Sbjct: 86 YADLGDLTAARELFERIPRRNVMSWNILFGGYIKNGDLGGARKLFDEMPE-----RNVAT 140
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W+A++ G T G+DEE++G M+ EG+ P+ L SV CA L+ + G++ H Y+
Sbjct: 141 WNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVV 200
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
R+G + V + L +Y RCG + + + VSCNTII G +NG+ A E
Sbjct: 201 RSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALE 260
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
F M +GV ++++ S IS +C
Sbjct: 261 YFCMMRSVGVAADVVTFVSAIS------------------------------------SC 284
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK 301
+D+ +L +G++IH + G+ V LV MY R L ++ F + L
Sbjct: 285 SDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLS 344
Query: 302 MKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRC 361
+ + + A++LF +M++ P T +L ACS E G +
Sbjct: 345 AMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKT 404
Query: 362 -GYDSDVHIGTALVDMYAKCGSLKHAR-LAYKRISTPDLVSQNAMLTA 407
G V T +VD+ + G L A L TPD V +L+A
Sbjct: 405 YGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSA 452
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 118/280 (42%), Gaps = 40/280 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +CG L + + V +M+P VS N++
Sbjct: 217 MYMRCGCLQEGEAVLRMLPSLSIVSCNTI------------------------------- 245
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
I G TQNG E A+ M++ G+ + T S + +C+ L L+ G++ HG +
Sbjct: 246 -----IAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQV 300
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G V+ LV +Y RCG + + ++F + + + +I Y +G+ +A
Sbjct: 301 MKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGFHGHGQKAI 360
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
ELF QM + G + +++ +++ + L +E F + G++P+ + V+
Sbjct: 361 ELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQPSVKHYTCVVDL 420
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQ 280
L E AL +++ L D + L+ C+ Q
Sbjct: 421 LGRSGCL---DEAEALILSMPLTPDGVIWKTLLSA-CKTQ 456
>gi|28876027|gb|AAO60036.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 704
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 170/504 (33%), Positives = 281/504 (55%), Gaps = 9/504 (1%)
Query: 94 ARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFS 153
AR S + AC L+ L ++ H + +G ++ F N L+ Y GD+ +A ++F
Sbjct: 110 ARLFSHLFRACRALRPL---RQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFE 166
Query: 154 KFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDE 213
+ +N +S N + GY +NG++ AR+LFD+M +R + +WN+M++G + +E
Sbjct: 167 RIPRRNVMSWNILFGGYIKNGDLGGARKLFDEMP----ERNVATWNAMVAGLTNLGFDEE 222
Query: 214 AFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALV 273
+ F D+ R+G+ P F GSV CA + + G+++HA + GL D VG +L
Sbjct: 223 SLGFFLDM-RREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLA 281
Query: 274 EMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIY 333
MY R L + + ++ + G N + A++ F M S+ + D+
Sbjct: 282 HMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVV 341
Query: 334 TVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRI 393
T +S+CS LA + +G+Q+H ++ G D V + T LV MY++CG L + +
Sbjct: 342 TFVSAISSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGY 401
Query: 394 STPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGS 453
D +AM++AY HGHG++ I F++++ G P ++FL+ L AC H+G + G
Sbjct: 402 CGSDTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGM 461
Query: 454 EFFDLMA-YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVS 512
+ F+LM Y ++PS+KHYTC+VDLL R+G L EA I +P+ PD V+W LL C +
Sbjct: 462 DCFELMTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKT 521
Query: 513 HGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCS 572
N + + A R+IEL+P+++ +YV+L+N+ A + RW D++ R+ M+D + K PG S
Sbjct: 522 QKNFDMAERIAKRVIELDPHDSASYVLLSNIRATSRRWGDVSEVRKAMRDNNVRKEPGVS 581
Query: 573 WIEDRDEIHKFRASDRSHDRSEEI 596
W+E + IH+F D SH R +EI
Sbjct: 582 WVELKGHIHQFCTGDESHPRQKEI 605
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 107/408 (26%), Positives = 174/408 (42%), Gaps = 43/408 (10%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y G L A+++F+ +P R+ +SWN + NG + A + + M N+ +
Sbjct: 152 YADLGDLTAARELFERIPRRNVMSWNILFGGYIKNGDLGGARKLFDEMPER-----NVAT 206
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W+A++ G T G+DEE++G M+ EG+ P+ L SV CA L+ + G++ H Y+
Sbjct: 207 WNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVV 266
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
R+G + V + L +Y RCG + + + VSCNTII G +NG+ A E
Sbjct: 267 RSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALE 326
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
F M +GV ++ TF S + +C
Sbjct: 327 YFCMMRSVGVAADVV------------------------------------TFVSAISSC 350
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK 301
+D+ +L +G++IH + G+ V LV MY R L ++ F + L
Sbjct: 351 SDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLS 410
Query: 302 MKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRC 361
+ + + A++LF +M++ P T +L ACS E G +
Sbjct: 411 AMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKT 470
Query: 362 -GYDSDVHIGTALVDMYAKCGSLKHAR-LAYKRISTPDLVSQNAMLTA 407
G V T +VD+ + G L A L TPD V +L+A
Sbjct: 471 YGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSA 518
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 118/280 (42%), Gaps = 40/280 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +CG L + + V +M+P VS N+
Sbjct: 283 MYMRCGCLQEGEAVLRMLPSLSIVSCNT-------------------------------- 310
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+I G TQNG E A+ M++ G+ + T S + +C+ L L+ G++ HG +
Sbjct: 311 ----IIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQV 366
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G V+ LV +Y RCG + + ++F + + + +I Y +G+ +A
Sbjct: 367 MKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGFHGHGQKAI 426
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
ELF QM + G + +++ +++ + L +E F + G++P+ + V+
Sbjct: 427 ELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQPSVKHYTCVVDL 486
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQ 280
L E AL +++ L D + L+ C+ Q
Sbjct: 487 LGRSGCL---DEAEALILSMPLTPDGVIWKTLLSA-CKTQ 522
>gi|298204424|emb|CBI16904.3| unnamed protein product [Vitis vinifera]
Length = 843
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 196/630 (31%), Positives = 315/630 (50%), Gaps = 75/630 (11%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC LD + + F MPE+ N V
Sbjct: 218 MYAKCKKLDCSIQFFHSMPEK------------------------------------NWV 241
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SWSA+I G QN + + MQ G+ + T +SV +CA L L LG + HG+
Sbjct: 242 SWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHA 301
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCEN------- 173
+ F ++ + +D+Y +C ++ A K+F+ N S N IIVGY +
Sbjct: 302 LKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGLGLD 361
Query: 174 -----GNVAEARELFDQMEHLGV---------QRGIISWNSMISGYVDNSLYDEAFSMFR 219
G + +E L V Q I N+++ Y EA +F
Sbjct: 362 EVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFE 421
Query: 220 DLLMRDGIEPTSFTFGSVLIACADMNSLRKGKE-------IHALAIALGLQSDTFVGGAL 272
+++ RD + + +IA + N G E IH I L D+FVG AL
Sbjct: 422 EMVSRDAVS------WNAIIAAHEQN----GNEEKTLSLFIHNRIIKSRLGLDSFVGIAL 471
Query: 273 VEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDI 332
++MY + + A+ D + + GF + A + FS+ML + + PD
Sbjct: 472 IDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDN 531
Query: 333 YTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKR 392
+T IL C++L T+E GKQ+HA I+ SD +I + LVDMY+KCG+++ +L +++
Sbjct: 532 FTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEK 591
Query: 393 ISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTG 452
D V+ NAM+ YA HG G+E + F + +P+H +FL+ L AC H G ++ G
Sbjct: 592 APNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKG 651
Query: 453 SEFF-DLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCV 511
+F +++ Y + P L+HY+C+VD++ R+G++ +A E I+ +P D+V+W LL C
Sbjct: 652 LHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSICK 711
Query: 512 SHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGC 571
HGN+E + AA +++LEP ++ YV+L+N++A AG W+++ + R+ M+ + K PGC
Sbjct: 712 IHGNVEVAEKAAYSILQLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGC 771
Query: 572 SWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
SWIE + E+H F D++H RS+EIY +D
Sbjct: 772 SWIEIKSEVHAFLVGDKAHPRSKEIYENLD 801
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 138/567 (24%), Positives = 257/567 (45%), Gaps = 61/567 (10%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC L+ A KVF MP+RD VSWN+++ A G + A + + M D +V
Sbjct: 86 MYIKCSDLEFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERD-----VV 140
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+++I G+ NG + I + +M G + T + VL +C+ L+ G + HG
Sbjct: 141 SWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLA 200
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ GF + + L+D+Y +C + +++ F KN VS + II G +N ++
Sbjct: 201 VKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGL 260
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
ELF +M+ GV G+ + TF SV +
Sbjct: 261 ELFKEMQKAGV----------------------------------GVSQS--TFASVFRS 284
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA +++LR G ++H A+ +D +G A ++MY + +L AQ F+ + N
Sbjct: 285 CAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPN------ 338
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
N+ ++NA+ + L D ++ AC+ + G QVH +++
Sbjct: 339 --------HNLQSYNAIIVGYARSDKGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMK 390
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
S++ + A++DMY KCG+L A L ++ + + D VS NA++ A+ +G+ ++ ++
Sbjct: 391 SLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSL 450
Query: 421 F--RRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLL 478
F RI+ S D ++ + G ++ + D +A V S L
Sbjct: 451 FIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTV-VSWNAIISGFSLQ 509
Query: 479 SRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYV 538
++ E + + + ++ + PD+ + +L C + +E G+ ++I+ E + Y+
Sbjct: 510 KQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDA-YI 568
Query: 539 --MLANLFAYAGRWSDLARTRQKMKDR 563
L ++++ G D +K +R
Sbjct: 569 SSTLVDMYSKCGNMQDFQLIFEKAPNR 595
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 113/423 (26%), Positives = 194/423 (45%), Gaps = 20/423 (4%)
Query: 95 RTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSK 154
+T S + C+ + L GK+ H + F FV N L+ +Y +C D+ A K+F
Sbjct: 43 KTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDG 102
Query: 155 FSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEA 214
++ VS N ++ GY G++ A++LFD M +R ++SWNS+ISGY+ N + +
Sbjct: 103 MPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMP----ERDVVSWNSLISGYLHNGDHRKV 158
Query: 215 FSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVE 274
+F + R G TF VL +C+ + G +IH LA+ +G D G AL++
Sbjct: 159 IDVFLQ-MGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLD 217
Query: 275 MYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYT 334
MY + + L + F + + G N ++LF EM + T
Sbjct: 218 MYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQST 277
Query: 335 VGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS 394
+ +C+ L+ + G Q+H +A++ + +DV IGTA +DMY KC +L A+ + +
Sbjct: 278 FASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLP 337
Query: 395 TPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSE 454
+L S NA++ YA G D +S A AC G +
Sbjct: 338 NHNLQSYNAIIVGYARSD--------------KGLGLDEVSLSGAFRACAVIKGDLEGLQ 383
Query: 455 FFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
L + ++ ++D+ + G L EA +++ ++ D+V W A++ +G
Sbjct: 384 VHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEM-VSRDAVSWNAIIAAHEQNG 442
Query: 515 NLE 517
N E
Sbjct: 443 NEE 445
>gi|222626043|gb|EEE60175.1| hypothetical protein OsJ_13106 [Oryza sativa Japonica Group]
Length = 628
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 170/504 (33%), Positives = 281/504 (55%), Gaps = 9/504 (1%)
Query: 94 ARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFS 153
AR S + AC L+ L ++ H + +G ++ F N L+ Y GD+ +A ++F
Sbjct: 44 ARLFSHLFRACRALRPL---RQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFE 100
Query: 154 KFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDE 213
+ +N +S N + GY +NG++ AR+LFD+M +R + +WN+M++G + +E
Sbjct: 101 RIPRRNVMSWNILFGGYIKNGDLGGARKLFDEMP----ERNVATWNAMVAGLTNLGFDEE 156
Query: 214 AFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALV 273
+ F D+ R+G+ P F GSV CA + + G+++HA + GL D VG +L
Sbjct: 157 SLGFFLDM-RREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLA 215
Query: 274 EMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIY 333
MY R L + + ++ + G N + A++ F M S+ + D+
Sbjct: 216 HMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVV 275
Query: 334 TVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRI 393
T +S+CS LA + +G+Q+H ++ G D V + T LV MY++CG L + +
Sbjct: 276 TFVSAISSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGY 335
Query: 394 STPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGS 453
D +AM++AY HGHG++ I F++++ G P ++FL+ L AC H+G + G
Sbjct: 336 CGSDTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGM 395
Query: 454 EFFDLMA-YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVS 512
+ F+LM Y ++PS+KHYTC+VDLL R+G L EA I +P+ PD V+W LL C +
Sbjct: 396 DCFELMTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKT 455
Query: 513 HGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCS 572
N + + A R+IEL+P+++ +YV+L+N+ A + RW D++ R+ M+D + K PG S
Sbjct: 456 QKNFDMAERIAKRVIELDPHDSASYVLLSNIRATSRRWGDVSEVRKAMRDNNVRKEPGVS 515
Query: 573 WIEDRDEIHKFRASDRSHDRSEEI 596
W+E + IH+F D SH R +EI
Sbjct: 516 WVELKGHIHQFCTGDESHPRQKEI 539
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 107/408 (26%), Positives = 175/408 (42%), Gaps = 43/408 (10%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y G L A+++F+ +P R+ +SWN + NG + A + + M N+ +
Sbjct: 86 YADLGDLTAARELFERIPRRNVMSWNILFGGYIKNGDLGGARKLFDEMPE-----RNVAT 140
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W+A++ G T G+DEE++G M+ EG+ P+ L SV CA L+ + G++ H Y+
Sbjct: 141 WNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVV 200
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
R+G + V + L +Y RCG + + + VSCNTII G +NG+ A E
Sbjct: 201 RSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALE 260
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
F M +GV ++++ S IS +C
Sbjct: 261 YFCMMRSVGVAADVVTFVSAIS------------------------------------SC 284
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK 301
+D+ +L +G++IH + G+ V LV MY R L ++ F + L
Sbjct: 285 SDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLS 344
Query: 302 MKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRC 361
+ + + A++LF +M++ P T +L ACS E G +
Sbjct: 345 AMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKT 404
Query: 362 -GYDSDVHIGTALVDMYAKCGSLKHAR-LAYKRISTPDLVSQNAMLTA 407
G V T +VD+ + G L A L TPD V +L+A
Sbjct: 405 YGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSA 452
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 118/280 (42%), Gaps = 40/280 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +CG L + + V +M+P VS N+
Sbjct: 217 MYMRCGCLQEGEAVLRMLPSLSIVSCNT-------------------------------- 244
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+I G TQNG E A+ M++ G+ + T S + +C+ L L+ G++ HG +
Sbjct: 245 ----IIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQV 300
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G V+ LV +Y RCG + + ++F + + + +I Y +G+ +A
Sbjct: 301 MKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGFHGHGQKAI 360
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
ELF QM + G + +++ +++ + L +E F + G++P+ + V+
Sbjct: 361 ELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQPSVKHYTCVVDL 420
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQ 280
L E AL +++ L D + L+ C+ Q
Sbjct: 421 LGRSGCL---DEAEALILSMPLTPDGVIWKTLLSA-CKTQ 456
>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 698
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 179/548 (32%), Positives = 297/548 (54%), Gaps = 37/548 (6%)
Query: 55 ETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGK 114
+ P+ +++ +I GFT EAI + M ++P+ T +L C+RLQ LS G+
Sbjct: 85 DEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSRLQALSEGE 144
Query: 115 EFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
+ H I + GF S+ FV N L+ +Y CG+
Sbjct: 145 QIHALIMKCGFGSHGFVKNTLIHMYANCGE------------------------------ 174
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTF 234
V AR +FD+M +R + +WNSM +GY + ++E +F ++L D I T
Sbjct: 175 -VEVARRVFDEMS----ERNVRTWNSMFAGYTKSGNWEEVVKLFHEMLELD-IRFDEVTL 228
Query: 235 GSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIEN 294
SVL AC + L G+ I+ GL+ + + +LV+MY + + A+ FD+++
Sbjct: 229 VSVLTACGRLADLELGEWINRYVEEKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDR 288
Query: 295 IENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV 354
+ + G+ A+ LF EM ++ P+ T+ ILS+C+ L +E GK V
Sbjct: 289 RDVVAWSAMISGYSQASRCREALDLFHEMQKANIDPNEITMVSILSSCAVLGALETGKWV 348
Query: 355 HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHG 414
H + + V +GTAL+D YAKCGS++ + + ++ +++S ++ A +G G
Sbjct: 349 HFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQG 408
Query: 415 KEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTC 473
K+ + +F +L P+ ++F+ LSAC HAG + G + F M+ + ++P ++HY C
Sbjct: 409 KKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGC 468
Query: 474 MVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNN 533
MVD+L RAG + EA++FIK +P+ P++V+W LL C H N+E G+ + +LI LEP +
Sbjct: 469 MVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTLLASCKVHKNVEIGEESLKQLIILEPTH 528
Query: 534 TGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRS 593
+G+Y++L+N++A GRW D + R +MK++ + K+PGCS IE IH+F A D H +S
Sbjct: 529 SGDYILLSNIYASVGRWEDALKVRGEMKEKGIKKTPGCSLIELDGVIHEFFAEDNVHSQS 588
Query: 594 EEIYTIID 601
EEIY I+
Sbjct: 589 EEIYNAIE 596
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 97/436 (22%), Positives = 184/436 (42%), Gaps = 78/436 (17%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY CG ++ A++VF M ER N+
Sbjct: 168 MYANCGEVEVARRVFDEMSER------------------------------------NVR 191
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+++ G+T++G EE + + M + + TL SVL AC RL L LG+ + Y+
Sbjct: 192 TWNSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYV 251
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
G NP ++ LVD+Y +CG + +A ++F + ++ V+ + +I GY + EA
Sbjct: 252 EEKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREAL 311
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+LF +M+ + I+P T S+L +
Sbjct: 312 DLFHEMQ------------------------------------KANIDPNEITMVSILSS 335
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA + +L GK +H ++ +G AL++ Y + + ++ F ++ ++N+L
Sbjct: 336 CAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGKMP-VKNVLS 394
Query: 301 -KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
+ G N A++ F ML ++ P+ T +LSACS ++ G+ +
Sbjct: 395 WTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLVDEGRDLFVSMS 454
Query: 360 R-CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNAMLTAYAMHGHGKEG 417
R G + + +VD+ + G ++ A K + P+ V +L + +H + + G
Sbjct: 455 RDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTLLASCKVHKNVEIG 514
Query: 418 IAHFRRILASGFRPDH 433
++++ P H
Sbjct: 515 EESLKQLII--LEPTH 528
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 120/267 (44%), Gaps = 3/267 (1%)
Query: 245 NSLRKGKEIHALAIALGLQSDTFVGGALVE--MYCRYQDLVAAQMAFDEIENIENLLGKM 302
++R EIHA I L V L+E + A F +I+ ++ +
Sbjct: 35 KTIRDLNEIHAHLIKTRLLLKPKVAENLLESAAILLPTSMDYAVSIFRQIDEPDSPAYNI 94
Query: 303 KEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCG 362
GF A+ LF EM + PD +T IL CS L + G+Q+HA ++CG
Sbjct: 95 MIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSRLQALSEGEQIHALIMKCG 154
Query: 363 YDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFR 422
+ S + L+ MYA CG ++ AR + +S ++ + N+M Y G+ +E + F
Sbjct: 155 FGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKSGNWEEVVKLFH 214
Query: 423 RILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAG 482
+L R D ++ +S L+AC ++ G + +K + T +VD+ ++ G
Sbjct: 215 EMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLITSLVDMYAKCG 274
Query: 483 ELGEAYEFIKKIPMAPDSVMWGALLGG 509
++ A ++ D V W A++ G
Sbjct: 275 QVDTARRLFDQMDRR-DVVAWSAMISG 300
>gi|15235472|ref|NP_195434.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75097747|sp|O23169.1|PP353_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g37170
gi|2464864|emb|CAB16758.1| putative protein [Arabidopsis thaliana]
gi|7270666|emb|CAB80383.1| putative protein [Arabidopsis thaliana]
gi|332661361|gb|AEE86761.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 691
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 178/535 (33%), Positives = 294/535 (54%), Gaps = 37/535 (6%)
Query: 77 EAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLV 136
EA+ +L R + +P A T +++ C++ + L GK+ H +I +GF+ + N L+
Sbjct: 72 EAVQLLGRAK----KPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLL 127
Query: 137 DVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGII 196
+Y +CG ++ A K+F + ++ S N ++ GY E G + EAR+LFD+M ++
Sbjct: 128 RMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEM----TEKDSY 183
Query: 197 SWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHAL 256
SW +M++GYV +EA ++ + P FT + A A + +R+GKEIH
Sbjct: 184 SWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGH 243
Query: 257 AIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNA 316
+ GL SD + +L++MY + + A+ FD+I E +V +W +
Sbjct: 244 IVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKI--------------VEKDVVSWTS 289
Query: 317 M--------------QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCG 362
M LFSE++ P+ YT +L+AC+ L T E GKQVH Y R G
Sbjct: 290 MIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVG 349
Query: 363 YDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFR 422
+D ++LVDMY KCG+++ A+ PDLVS +++ A +G E + +F
Sbjct: 350 FDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFD 409
Query: 423 RILASGFRPDHISFLSALSACVHAGSIKTGSEFF-DLMAYYDVKPSLKHYTCMVDLLSRA 481
+L SG +PDH++F++ LSAC HAG ++ G EFF + + + + HYTC+VDLL+R+
Sbjct: 410 LLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARS 469
Query: 482 GELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLA 541
G + I ++PM P +W ++LGGC ++GN++ + AA L ++EP N YV +A
Sbjct: 470 GRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMA 529
Query: 542 NLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEI 596
N++A AG+W + + R++M++ + K PG SW E + + H F A+D SH +I
Sbjct: 530 NIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQI 584
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 121/397 (30%), Positives = 192/397 (48%), Gaps = 59/397 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGSL DA+KVF MP RD SWN +V A GL+ EA + + M+ D+
Sbjct: 129 MYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDS-----Y 183
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQ-AEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
SW+A++ G+ + EEA+ + MQ PN T+S + A A ++ + GKE HG+
Sbjct: 184 SWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGH 243
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
I R G S+ + + L+D+Y +CG + A IF K K+ VS
Sbjct: 244 IVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVS----------------- 286
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
W SMI Y +S + E FS+F +L+ P +TF VL
Sbjct: 287 ------------------WTSMIDRYFKSSRWREGFSLFSELV-GSCERPNEYTFAGVLN 327
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFD-----EIEN 294
ACAD+ + GK++H +G +F +LV+MY + ++ +A+ D ++ +
Sbjct: 328 ACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVS 387
Query: 295 IENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV 354
+L+G ++G +P+ A++ F +L PD T +LSAC+ +E+G +
Sbjct: 388 WTSLIGGCAQNG-QPD----EALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEF 442
Query: 355 HAYAI----RCGYDSDVHIGTALVDMYAKCGSLKHAR 387
Y+I R + SD + T LVD+ A+ G + +
Sbjct: 443 F-YSITEKHRLSHTSDHY--TCLVDLLARSGRFEQLK 476
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 131/298 (43%), Gaps = 43/298 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKCG +D+A+ +F + E+D +V
Sbjct: 262 MYGKCGCIDEARNIFDKIVEKD------------------------------------VV 285
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+++I + ++ E + + PN T + VL ACA L LGK+ HGY+
Sbjct: 286 SWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYM 345
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
TR GF F + LVD+Y +CG++ SA + + VS ++I G +NG EA
Sbjct: 346 TRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEAL 405
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+ FD + G + +++ +++S L ++ F + + + TS + ++
Sbjct: 406 KYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDL 465
Query: 241 CADMNSLRKGK--EIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
A R G+ ++ ++ + ++ F+ +++ Y ++ A+ A E+ IE
Sbjct: 466 LA-----RSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIE 518
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 65/309 (21%), Positives = 128/309 (41%), Gaps = 21/309 (6%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG+++ AK V P+ D VSW S++ CA NG EAL+ + + P+ V
Sbjct: 363 MYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLK-SGTKPDHV 421
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRM-QAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
++ V+ T G E+ + + + + L + + ++ AR + ++
Sbjct: 422 TFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRF---EQLKSV 478
Query: 120 ITRNGFMSNPFV---VNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNV 176
I+ + F+ V G Y A + K +N V+ T+ Y G
Sbjct: 479 ISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKW 538
Query: 177 AEARELFDQMEHLGV-QRGIISWNSM-------ISGYVDNSLYDEAFSMFRDLLMRDGIE 228
E ++ +M+ +GV +R SW + I+ + +Y++ R+L R ++
Sbjct: 539 EEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLREL--RKKMK 596
Query: 229 PTSFTFGSVLIACADMNSLRKGKEI--HALAIALGLQSDTFVGGALVEMYCRYQDLVAAQ 286
+ + L+ D+ +K + + H+ +A+ + G ++++ + V
Sbjct: 597 EEGYVPATSLVL-HDVEDEQKEENLVYHSEKLAVAFAILSTEEGTAIKVFKNLRSCVDCH 655
Query: 287 MAFDEIENI 295
A I NI
Sbjct: 656 GAIKFISNI 664
>gi|296085026|emb|CBI28441.3| unnamed protein product [Vitis vinifera]
Length = 913
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 202/604 (33%), Positives = 315/604 (52%), Gaps = 48/604 (7%)
Query: 1 MYGKC-GSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNL 59
MYG C S +DA+ VF + R+ +SWNS+++ + G + A + M
Sbjct: 246 MYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSM---------- 295
Query: 60 VSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPN-ARTLSSVLPACARLQKLSLGKEFHG 118
+E +G F+ PN A + SVL R G+E H
Sbjct: 296 ---------------QKEGLGFSFK-------PNDAFSEFSVLEEGRR-----KGREVHA 328
Query: 119 YITRNGFMSNPFVV-NGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
++ R G N + NGLV++Y + G + A +F K+ VS N++I G +N
Sbjct: 329 HVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSE 388
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
+A E+F M + +SWNS+I D+ + +MR G + TF ++
Sbjct: 389 DAAEMFSLMP----EYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINI 444
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI-ENIE 296
L A + ++ +IHAL + L DT +G AL+ Y + ++ + F + E +
Sbjct: 445 LSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRD 504
Query: 297 NLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHA 356
+ G+ N AM L M+ D +T ILSAC+S+AT+ERG +VHA
Sbjct: 505 EVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHA 564
Query: 357 YAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKE 416
IR +SDV +G+ALVDMY+KCG + +A ++ + ++ S N+M++ YA HGHG++
Sbjct: 565 CGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEK 624
Query: 417 GIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMV 475
+ F R++ G PDH++F+ LSAC H G ++ G E F M+ Y + P ++H++CMV
Sbjct: 625 ALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMV 684
Query: 476 DLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG--NLEFGQIAADRLIELEPNN 533
DLL RAG+L E +FI +PM P+ ++W +LG C N E G+ AA+ L+ELEP N
Sbjct: 685 DLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQN 744
Query: 534 TGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRS 593
NYV+LAN++A +W D+A+ R MK+ + K GCSW+ +D +H F A D+ H
Sbjct: 745 AVNYVLLANMYASGEKWEDVAKARTAMKEAAVKKEAGCSWVTMKDGVHVFVAGDKLHPEK 804
Query: 594 EEIY 597
+ IY
Sbjct: 805 DLIY 808
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 128/497 (25%), Positives = 209/497 (42%), Gaps = 74/497 (14%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACAR--LQKLSLGKE 115
NLV+W+ +I G+TQNG +EA M G PN S L AC LG +
Sbjct: 164 NLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQ 223
Query: 116 FHGYITRNGFMSNPFVVNGLVDVYRRCGDMLS-ALKIFSKFSIKNEVSCNTIIVGYCENG 174
HG I++ + S+ V N L+ +Y C D + A +F I+N +S N+II Y G
Sbjct: 224 IHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRG 283
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTF 234
+ A +LF M+ G+ G+ ++AFS F ++ +G
Sbjct: 284 DAVSAYDLFSSMQKEGL------------GFSFKP--NDAFSEFS--VLEEG-------- 319
Query: 235 GSVLIACADMNSLRKGKEIHALAIALGLQSDTF-VGGALVEMYCRYQDLVAAQMAFDEIE 293
RKG+E+HA I GL + +G LV MY + + A F+ +
Sbjct: 320 ------------RRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMV 367
Query: 294 NIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGI---------------- 337
+++ G + N + +A ++FS M D +G
Sbjct: 368 EKDSVSWNSLISGLDQNECSEDAAEMFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFL 427
Query: 338 ----------------ILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCG 381
ILSA SSL+ E Q+HA ++ D IG AL+ Y KCG
Sbjct: 428 QMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCG 487
Query: 382 SLKHARLAYKRIS-TPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSAL 440
+ + R+S T D VS N+M++ Y + + + ++ G R D +F + L
Sbjct: 488 EMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATIL 547
Query: 441 SACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDS 500
SAC +++ G E ++ + + +VD+ S+ G + A F + +P+ +
Sbjct: 548 SACASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMPLR-NV 606
Query: 501 VMWGALLGGCVSHGNLE 517
W +++ G HG+ E
Sbjct: 607 YSWNSMISGYARHGHGE 623
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 103/441 (23%), Positives = 177/441 (40%), Gaps = 88/441 (19%)
Query: 113 GKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCE 172
+E H + GF+ N F+ N L+++Y R GD+ S
Sbjct: 118 ARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGS------------------------- 152
Query: 173 NGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSF 232
A++LFD+M + R +++W +ISGY N DEA + FRD++ R G P +
Sbjct: 153 ------AQKLFDEMSN----RNLVTWACLISGYTQNGKPDEACARFRDMV-RAGFIPNHY 201
Query: 233 TFGSVLIACADM--NSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVA-AQMAF 289
FGS L AC + + + G +IH L SD V L+ MY D A+ F
Sbjct: 202 AFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVF 261
Query: 290 DEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEM----LSLDLTPDIYTVGIILSACSSL 345
D I ++ + +A LFS M L P+ A S
Sbjct: 262 DGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPN--------DAFSEF 313
Query: 346 ATME----RGKQVHAYAIRCGY-DSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVS 400
+ +E +G++VHA+ IR G D+ V IG LV+MYAK G++ A ++ + D VS
Sbjct: 314 SVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVS 373
Query: 401 QNAMLTAYAMH--------------------------------GHGKEGIAHFRRILASG 428
N++++ + + + +F +++ G
Sbjct: 374 WNSLISGLDQNECSEDAAEMFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGG 433
Query: 429 FRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAY 488
+ ++F++ LSA + + L+ Y + ++ + GE+ E
Sbjct: 434 WGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECE 493
Query: 489 EFIKKIPMAPDSVMWGALLGG 509
+ ++ D V W +++ G
Sbjct: 494 KIFARMSETRDEVSWNSMISG 514
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 121/275 (44%), Gaps = 25/275 (9%)
Query: 249 KGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFE 308
+ +E+H +I G + F+ L+ +Y R DL +AQ FDE+ N + G+
Sbjct: 117 EARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYT 176
Query: 309 PNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSAC--SSLATMERGKQVHAYAIRCGYDSD 366
N A F +M+ P+ Y G L AC S + + G Q+H + Y SD
Sbjct: 177 QNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSD 236
Query: 367 VHIGTALVDMYAKC-GSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRIL 425
V + L+ MY C S AR + I + +S N++++ Y+ G F +
Sbjct: 237 VVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQ 296
Query: 426 ASG----FRP-DHISFLSALSAC------VHAGSIKTGSEFFDLMAYYDVKPSLKHYTCM 474
G F+P D S S L VHA I+TG D K ++ + +
Sbjct: 297 KEGLGFSFKPNDAFSEFSVLEEGRRKGREVHAHVIRTGLN--------DNKVAIGN--GL 346
Query: 475 VDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
V++ +++G + +A + ++ + DSV W +L+ G
Sbjct: 347 VNMYAKSGAIADACS-VFELMVEKDSVSWNSLISG 380
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 57/99 (57%)
Query: 349 ERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAY 408
E +++H +I+ G+ ++ + L+++Y + G L A+ + +S +LV+ +++ Y
Sbjct: 116 EEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGY 175
Query: 409 AMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAG 447
+G E A FR ++ +GF P+H +F SAL AC +G
Sbjct: 176 TQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESG 214
>gi|414586388|tpg|DAA36959.1| TPA: hypothetical protein ZEAMMB73_269943 [Zea mays]
Length = 643
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 177/539 (32%), Positives = 292/539 (54%), Gaps = 22/539 (4%)
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNA--RTLSSVLPACARLQKLSLGKEFHGY 119
W+ I G+ +A+ + RM+A ++ +L + L +CA L +LG H
Sbjct: 16 WAQQIRAAAAEGHFCDAVSLFLRMRASAAPRSSVPASLPAALKSCAALGLSALGASLHAL 75
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
R+G ++ F N L+++Y C S L S IV + E+
Sbjct: 76 AIRSGAFADRFTANALLNLY--CKVPCSYLD-----------STGVAIVDVPGSSTAFES 122
Query: 180 -RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
R++FD+M ++R ++SWN+++ G + + EA R + R+G P SFT +VL
Sbjct: 123 VRKVFDEM----IERDVVSWNTLVLGCAEEGRHHEALGFVRKMC-REGFRPDSFTLSTVL 177
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
A+ +++G E+H A G SD FVG +L++MY + FD + +++
Sbjct: 178 PIFAECADVKRGLEVHGFAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDHI 237
Query: 299 LGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYA 358
L G N A+ +F ML + P T ++ C +LA++ GKQ+HAY
Sbjct: 238 LWNSLLAGCAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYV 297
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGI 418
I G++ +V I ++L+DMY KCG + A + ++S+PD+VS AM+ YA+HG +E +
Sbjct: 298 ICGGFEDNVFISSSLIDMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALHGPAREAL 357
Query: 419 AHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDL 477
F R+ +P+HI+FL+ L+AC HAG + G ++F M+ +Y + P+L+H+ + D
Sbjct: 358 VLFERMELGNAKPNHITFLAVLTACSHAGLVDKGWKYFKSMSNHYGIVPTLEHFAALADT 417
Query: 478 LSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNY 537
L RAGEL EAY FI K+ + P + +W LL C H N + A +++ELEP + G++
Sbjct: 418 LGRAGELDEAYNFISKMQIKPTASVWSTLLRACRVHKNTMLAEEVAKKIMELEPRSIGSH 477
Query: 538 VMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEI 596
V+L+N+++ +GRW++ A R+ M+ + M K P CSWIE + ++H F A DRSH + I
Sbjct: 478 VVLSNMYSASGRWNEAAHLRESMRKKGMKKDPACSWIEVKSKLHVFVAHDRSHPWYDRI 536
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 99/385 (25%), Positives = 168/385 (43%), Gaps = 73/385 (18%)
Query: 3 GKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSW 62
G + + +KVF M ERD VSWN++V CA
Sbjct: 115 GSSTAFESVRKVFDEMIERDVVSWNTLVLGCA---------------------------- 146
Query: 63 SAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITR 122
+ G EA+G + +M EG P++ TLS+VLP A + G E HG+ R
Sbjct: 147 --------EEGRHHEALGFVRKMCREGFRPDSFTLSTVLPIFAECADVKRGLEVHGFAFR 198
Query: 123 NGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAREL 182
NGF S+ FV + L+D+Y C ++K+F +++ + N+++ G +NG+V EA +
Sbjct: 199 NGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDHILWNSLLAGCAQNGSVEEALGI 258
Query: 183 FDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACA 242
F +M ++ G+ P TF S++ C
Sbjct: 259 FRRM------------------------------------LQAGVRPVPVTFSSLIPVCG 282
Query: 243 DMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKM 302
++ SLR GK++HA I G + + F+ +L++MYC+ ++ A FD++ + + +
Sbjct: 283 NLASLRFGKQLHAYVICGGFEDNVFISSSLIDMYCKCGEISIAHCIFDKMSSPDVVSWTA 342
Query: 303 KEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG-KQVHAYAIRC 361
G+ + A+ LF M + P+ T +L+ACS +++G K + +
Sbjct: 343 MIMGYALHGPAREALVLFERMELGNAKPNHITFLAVLTACSHAGLVDKGWKYFKSMSNHY 402
Query: 362 GYDSDVHIGTALVDMYAKCGSLKHA 386
G + AL D + G L A
Sbjct: 403 GIVPTLEHFAALADTLGRAGELDEA 427
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 109/237 (45%), Gaps = 36/237 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY C D + KVF +P RD + WNS++ CA NG V EAL
Sbjct: 214 MYANCTRTDYSVKVFDNLPVRDHILWNSLLAGCAQNGSVEEAL----------------- 256
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
G+ RM G+ P T SS++P C L L GK+ H Y+
Sbjct: 257 -------------------GIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYV 297
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
GF N F+ + L+D+Y +CG++ A IF K S + VS +I+GY +G EA
Sbjct: 298 ICGGFEDNVFISSSLIDMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALHGPAREAL 357
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
LF++ME + I++ ++++ L D+ + F+ + GI PT F ++
Sbjct: 358 VLFERMELGNAKPNHITFLAVLTACSHAGLVDKGWKYFKSMSNHYGIVPTLEHFAAL 414
>gi|296090147|emb|CBI39966.3| unnamed protein product [Vitis vinifera]
Length = 726
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 182/581 (31%), Positives = 308/581 (53%), Gaps = 62/581 (10%)
Query: 52 LDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLS 111
L + + N+ W+++I T NG EA+ + Q L+P+ T SV+ ACA L
Sbjct: 73 LASPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFE 132
Query: 112 LGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYC 171
+ K H + GF S+ ++ N L+D+Y R D+ A K+F + +++ VS N++I GY
Sbjct: 133 MAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYN 192
Query: 172 ENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTS 231
NG EA E++ Y L+ E + F+ P
Sbjct: 193 ANGYWNEALEIY---------------------YQSIKLFMEMVNQFK---------PDL 222
Query: 232 FTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDE 291
T S+L AC + L GK +H I G + DT L+ MY + +L+A+Q F
Sbjct: 223 LTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSG 282
Query: 292 IE-----------NIENLLGKMK------EDGFEPNVYTWNA--------------MQLF 320
++ N+ GKM E+ ++ TWN +++
Sbjct: 283 MKCKDSVSWNSMINVYIQNGKMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMI 342
Query: 321 SEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKC 380
S M + +TPD+ T+ IL CS LA +GK++H + G +SDV +G L++MY+KC
Sbjct: 343 SRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKC 402
Query: 381 GSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSAL 440
GSL+++ +K + T D+V+ A+++A M+G GK+ + F + A+G PDH++F++ +
Sbjct: 403 GSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAII 462
Query: 441 SACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPD 499
AC H+G ++ G +F M Y ++P ++HY C+VDLLSR+ L +A +FI +P+ PD
Sbjct: 463 FACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPD 522
Query: 500 SVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQK 559
S +WGALL C G+ E + ++R+IEL P++TG YV+++N++A G+W + R+
Sbjct: 523 SSIWGALLSACRMSGDTEIAERVSERIIELNPDDTGYYVLVSNIYAALGKWDQVRSIRKS 582
Query: 560 MKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTII 600
+K R + K PGCSW+E +++++ F + ++ EE+ ++
Sbjct: 583 IKARGLKKDPGCSWMEIQNKVYVFGTGTKFFEQFEEVNKLL 623
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 121/429 (28%), Positives = 197/429 (45%), Gaps = 67/429 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY + LD A+KVF+ MP RD VSWNS+++ ANG EALE +
Sbjct: 159 MYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALE---------------I 203
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+ ++ LF +P+ T++S+L AC L L GK H Y+
Sbjct: 204 YYQSI---------------KLFMEMVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYM 248
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+G+ + N L+++Y +CG++L++ ++FS K+ VS N++I Y +NG + ++
Sbjct: 249 ITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSL 308
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
++F+ M+ R II+WN++I+ V + + M + +G+ P T S+L
Sbjct: 309 KVFENMK----ARDIITWNTIIASCVHSEDCNLGLRMISR-MRTEGVTPDMATMLSILPV 363
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C+ + + R+GKEIH LGL+SD VG L+EMY + L + F L
Sbjct: 364 CSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFK--------LM 415
Query: 301 KMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSSLA 346
K K+ V TW A+ + F EM + + PD I+ ACS
Sbjct: 416 KTKD------VVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSG 469
Query: 347 TMERGKQVHAYAIRCGYDSDVHIG--TALVDMYAKCGSLKHAR-LAYKRISTPDLVSQNA 403
+E G + + ++ Y + I +VD+ ++ L A PD A
Sbjct: 470 LVEEGLN-YFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGA 528
Query: 404 MLTAYAMHG 412
+L+A M G
Sbjct: 529 LLSACRMSG 537
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 139/303 (45%), Gaps = 34/303 (11%)
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
F S+ A A + + ++H+L I LGL L+ Y ++D ++ F +
Sbjct: 16 FSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVF-RLA 74
Query: 294 NIENLLGKMKEDGFEPNVYTWN--------------AMQLFSEMLSLDLTPDIYTVGIIL 339
+ N NVY WN A+ L+SE + L PD YT ++
Sbjct: 75 SPSN------------NVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVI 122
Query: 340 SACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLV 399
+AC+ L E K +H + G+ SD++IG AL+DMY + L AR ++ + D+V
Sbjct: 123 NACAGLLDFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVV 182
Query: 400 SQNAMLTAYAMHGHGKEGIA-HFRRI-----LASGFRPDHISFLSALSACVHAGSIKTGS 453
S N++++ Y +G+ E + +++ I + + F+PD ++ S L AC H G ++ G
Sbjct: 183 SWNSLISGYNANGYWNEALEIYYQSIKLFMEMVNQFKPDLLTITSILQACGHLGDLEFGK 242
Query: 454 EFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSH 513
D M + ++++ ++ G L + E + DSV W +++ + +
Sbjct: 243 YVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMK-CKDSVSWNSMINVYIQN 301
Query: 514 GNL 516
G +
Sbjct: 302 GKM 304
>gi|357441891|ref|XP_003591223.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480271|gb|AES61474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 606
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 184/561 (32%), Positives = 302/561 (53%), Gaps = 42/561 (7%)
Query: 46 LERMSSLDNETP--NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPA 103
E +L +E P ++++W+++I G+T + A + M +G++PNA T+S+VL A
Sbjct: 57 FEEAHTLFDEMPHRDVIAWTSMITGYTSCNHHSRAWNVFTNMLRDGVKPNAFTVSAVLKA 116
Query: 104 CARLQKLSLGKEFHGYITRNGFM-SNPFVVNGLVDVYRRCGD-MLSALKIFSKFSIKNEV 161
C L+ L GK HG + G S+ +V N L+D+Y C D M +A +F KN V
Sbjct: 117 CKSLKALLCGKLVHGLAIKIGTQGSSIYVDNALMDMYATCCDSMDNARLVFEDIGTKNAV 176
Query: 162 SCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDL 221
S W ++I+GY +FR +
Sbjct: 177 S-----------------------------------WTTLITGYTHRRDAFGGLRVFRQM 201
Query: 222 LMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQD 281
M +G E + F+F + ACA + S GK++HA I G +S+ V A+++MYCR +
Sbjct: 202 FMEEG-ELSPFSFSIAVSACASIGSSNLGKQVHAAVINHGFESNLPVMNAILDMYCRCRC 260
Query: 282 LVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSA 341
A+ F E+ + + GFE + ++ ++ +FS+M+S +P+ +T +++A
Sbjct: 261 ASEAKQLFGEMTQKDTITWNTLIAGFE-TLDSYESLCIFSQMVSEGFSPNCFTFTSVIAA 319
Query: 342 CSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQ 401
C++LA + G+Q+H I G D+++ + AL+DMYAKCG++ + + + +LVS
Sbjct: 320 CANLAILYCGQQLHGGIIHRGLDNNLELSNALIDMYAKCGNVADSHKIFSGMRHTNLVSW 379
Query: 402 NAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-A 460
+M+ Y HGHGKE + F ++ SG +PD I F++ LSAC HAG + G +F LM +
Sbjct: 380 TSMMIGYGAHGHGKEAVDLFNEMVGSGIKPDKIVFMAVLSACSHAGLVDEGLRYFRLMTS 439
Query: 461 YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQ 520
YY+V P Y C+VDLLSRAG + EAYE I+ +P PD +W ALLG C + +
Sbjct: 440 YYNVAPDRDIYACVVDLLSRAGRVKEAYELIENMPFKPDESIWVALLGACKKYKQPSIQK 499
Query: 521 IAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEI 580
+AA +++E++PN G YV+L+N A G W+D A R+ M+ + K G SWIE ++++
Sbjct: 500 LAALKVLEMKPNKAGTYVLLSNFSAAEGNWADFASLRKLMRSTKSKKEVGRSWIELKNQV 559
Query: 581 HKFRASDRSHDRSEEIYTIID 601
F D ++E+ +++
Sbjct: 560 CSFIVGDIFDSSNKEVCEVLE 580
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 101/393 (25%), Positives = 201/393 (51%), Gaps = 28/393 (7%)
Query: 155 FSIKNEVSC----------------NTIIVGYCENGNVAEARELFDQMEHLGVQRGIISW 198
FS++N + C +I Y + G+ EA LFD+M H R +I+W
Sbjct: 20 FSVQNSLRCIQNDTPFNPKDLTGLTTDLIKSYFDKGSFEEAHTLFDEMPH----RDVIAW 75
Query: 199 NSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAI 258
SMI+GY + + A+++F ++L RDG++P +FT +VL AC + +L GK +H LAI
Sbjct: 76 TSMITGYTSCNHHSRAWNVFTNML-RDGVKPNAFTVSAVLKACKSLKALLCGKLVHGLAI 134
Query: 259 ALGLQ-SDTFVGGALVEMYCRYQD-LVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNA 316
+G Q S +V AL++MY D + A++ F++I + G+ +
Sbjct: 135 KIGTQGSSIYVDNALMDMYATCCDSMDNARLVFEDIGTKNAVSWTTLITGYTHRRDAFGG 194
Query: 317 MQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDM 376
+++F +M + ++ I +SAC+S+ + GKQVHA I G++S++ + A++DM
Sbjct: 195 LRVFRQMFMEEGELSPFSFSIAVSACASIGSSNLGKQVHAAVINHGFESNLPVMNAILDM 254
Query: 377 YAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISF 436
Y +C A+ + ++ D ++ N ++ + E + F ++++ GF P+ +F
Sbjct: 255 YCRCRCASEAKQLFGEMTQKDTITWNTLIAGFETLD-SYESLCIFSQMVSEGFSPNCFTF 313
Query: 437 LSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPM 496
S ++AC + + G + + + + +L+ ++D+ ++ G + ++++ +
Sbjct: 314 TSVIAACANLAILYCGQQLHGGIIHRGLDNNLELSNALIDMYAKCGNVADSHKIFSGMRH 373
Query: 497 APDSVMWGALLGGCVSHGNLEFGQIAADRLIEL 529
+ V W +++ G +HG+ G+ A D E+
Sbjct: 374 T-NLVSWTSMMIGYGAHGH---GKEAVDLFNEM 402
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/390 (23%), Positives = 165/390 (42%), Gaps = 79/390 (20%)
Query: 1 MYGKC-GSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNL 59
MY C S+D+A+ VF+ + ++ VSW +++T
Sbjct: 152 MYATCCDSMDNARLVFEDIGTKNAVSWTTLIT---------------------------- 183
Query: 60 VSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
G+T + + +M E E + + S + ACA + +LGK+ H
Sbjct: 184 --------GYTHRRDAFGGLRVFRQMFMEEGELSPFSFSIAVSACASIGSSNLGKQVHAA 235
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ +GF SN V+N ++D+Y RC A ++F + + K+ ++ NT+I G+
Sbjct: 236 VINHGFESNLPVMNAILDMYCRCRCASEAKQLFGEMTQKDTITWNTLIAGF--------- 286
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
E D E L + ++S +G P FTF SV+
Sbjct: 287 -ETLDSYESLCIFSQMVS---------------------------EGFSPNCFTFTSVIA 318
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
ACA++ L G+++H I GL ++ + AL++MY + ++ + F + + +
Sbjct: 319 ACANLAILYCGQQLHGGIIHRGLDNNLELSNALIDMYAKCGNVADSHKIFSGMRHTNLVS 378
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
G+ + + A+ LF+EM+ + PD +LSACS ++ G + + +
Sbjct: 379 WTSMMIGYGAHGHGKEAVDLFNEMVGSGIKPDKIVFMAVLSACSHAGLVDEG--LRYFRL 436
Query: 360 RCGY---DSDVHIGTALVDMYAKCGSLKHA 386
Y D I +VD+ ++ G +K A
Sbjct: 437 MTSYYNVAPDRDIYACVVDLLSRAGRVKEA 466
>gi|449499218|ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 183/547 (33%), Positives = 288/547 (52%), Gaps = 38/547 (6%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
N+VSW+A+I GFT N +A + RM EG+ P+A+T V A L+ ++ KE
Sbjct: 236 NVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVS 295
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
GY G SN V L+D+ +CG +
Sbjct: 296 GYALELGVDSNTLVGTALIDMNSKCGSL-------------------------------Q 324
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
EAR +F+ H R WN+MISGY+ + ++A +F + D I +T+ SV
Sbjct: 325 EARSIFN--SHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQND-IYLDHYTYCSV 381
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTF-VGGALVEMYCRYQDLVAAQMAFDEIENIE 296
A A + L GK++HA AI GL+ + + A+ Y + L + F+ +E+
Sbjct: 382 FNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMED-R 440
Query: 297 NLLGKMKEDGFEPNVYTWN-AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVH 355
+L+ W+ A+++FS M + + P+ +T +L +C++L +E G+QVH
Sbjct: 441 DLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVH 500
Query: 356 AYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGK 415
+ G D D I +ALVDMYAKCG L A+ + RIS D VS A++ +A HG
Sbjct: 501 GIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNADTVSWTAIIAGHAQHGIVD 560
Query: 416 EGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCM 474
+ + FRR++ G P+ ++FL L AC H G ++ G ++F LM Y + P ++HY C+
Sbjct: 561 DALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEEGLQYFKLMKKTYGLVPEMEHYACI 620
Query: 475 VDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNT 534
VDLLSR G L +A EFI ++P+ P+ ++W LLG C HGN+E G++AA +++ + N+
Sbjct: 621 VDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLGACRVHGNVELGELAAQKILSFKAENS 680
Query: 535 GNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSE 594
YV+L+N + +G + D R MK++ + K PGCSWI +HKF A D+ H +
Sbjct: 681 ATYVLLSNTYIESGSYKDGLSLRHVMKEQGVKKEPGCSWISVNGTLHKFYAGDQQHPEKD 740
Query: 595 EIYTIID 601
+IY ++
Sbjct: 741 KIYAKLE 747
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 116/469 (24%), Positives = 197/469 (42%), Gaps = 83/469 (17%)
Query: 95 RTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVV--NGLVDVYRRCGDMLSALKIF 152
+ L +L C + L K HG++ ++ F ++ +V N + Y +C D+ +A ++F
Sbjct: 69 QPLVDLLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLF 128
Query: 153 SKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYD 212
+ S +N S +I G ENG + E F +M+
Sbjct: 129 DQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQ------------------------- 163
Query: 213 EAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGAL 272
GI P F + +L C ++S+ G +HA + G S TFV AL
Sbjct: 164 -----------SQGIFPDQFAYSGILQICIGLDSIELGNMVHAQIVIRGFTSHTFVSTAL 212
Query: 273 VEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDI 332
+ MY + Q++ + F+ + + + GF N +A LF M+ +TPD
Sbjct: 213 LNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDA 272
Query: 333 YTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYK- 391
T + A L + + K+V YA+ G DS+ +GTAL+DM +KCGSL+ AR +
Sbjct: 273 QTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNS 332
Query: 392 -----RISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSAC--- 443
R + P NAM++ Y G ++ + F ++ + DH ++ S +A
Sbjct: 333 HFITCRFNAP----WNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNAIAAL 388
Query: 444 --------VHAGSIKTGSE-------------FFDLMAYYDVKP--------SLKHYTCM 474
VHA +IK+G E + + DV+ L +T +
Sbjct: 389 KCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSL 448
Query: 475 VDLLSRAGELGEAYEFIKKIP---MAPDSVMWGALLGGCVSHGNLEFGQ 520
V S+ E +A E + +AP+ + ++L C + LE+GQ
Sbjct: 449 VTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQ 497
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 95/198 (47%), Gaps = 10/198 (5%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG L DAKKVF + D VSW +++ A +G+V +AL+ RM L E PN V
Sbjct: 521 MYAKCGCLGDAKKVFNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVE-PNAV 579
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
++ V+ + G EE + M+ GL P + ++ +R+ L+ EF
Sbjct: 580 TFLCVLFACSHGGLVEEGLQYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLNDAMEF--- 636
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDM----LSALKIFSKFSIKNEVSCNTIIVGYCENGN 175
I+R N V L+ R G++ L+A KI S F +N + + Y E+G+
Sbjct: 637 ISRMPVEPNEMVWQTLLGACRVHGNVELGELAAQKILS-FKAENSATYVLLSNTYIESGS 695
Query: 176 VAEARELFDQMEHLGVQR 193
+ L M+ GV++
Sbjct: 696 YKDGLSLRHVMKEQGVKK 713
>gi|115456187|ref|NP_001051694.1| Os03g0816600 [Oryza sativa Japonica Group]
gi|113550165|dbj|BAF13608.1| Os03g0816600, partial [Oryza sativa Japonica Group]
Length = 708
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 170/504 (33%), Positives = 281/504 (55%), Gaps = 9/504 (1%)
Query: 94 ARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFS 153
AR S + AC L+ L ++ H + +G ++ F N L+ Y GD+ +A ++F
Sbjct: 106 ARLFSHLFRACRALRPL---RQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFE 162
Query: 154 KFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDE 213
+ +N +S N + GY +NG++ AR+LFD+M +R + +WN+M++G + +E
Sbjct: 163 RIPRRNVMSWNILFGGYIKNGDLGGARKLFDEMP----ERNVATWNAMVAGLTNLGFDEE 218
Query: 214 AFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALV 273
+ F D+ R+G+ P F GSV CA + + G+++HA + GL D VG +L
Sbjct: 219 SLGFFLDM-RREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLA 277
Query: 274 EMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIY 333
MY R L + + ++ + G N + A++ F M S+ + D+
Sbjct: 278 HMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVV 337
Query: 334 TVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRI 393
T +S+CS LA + +G+Q+H ++ G D V + T LV MY++CG L + +
Sbjct: 338 TFVSAISSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGY 397
Query: 394 STPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGS 453
D +AM++AY HGHG++ I F++++ G P ++FL+ L AC H+G + G
Sbjct: 398 CGSDTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGM 457
Query: 454 EFFDLMA-YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVS 512
+ F+LM Y ++PS+KHYTC+VDLL R+G L EA I +P+ PD V+W LL C +
Sbjct: 458 DCFELMTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKT 517
Query: 513 HGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCS 572
N + + A R+IEL+P+++ +YV+L+N+ A + RW D++ R+ M+D + K PG S
Sbjct: 518 QKNFDMAERIAKRVIELDPHDSASYVLLSNIRATSRRWGDVSEVRKAMRDNNVRKEPGVS 577
Query: 573 WIEDRDEIHKFRASDRSHDRSEEI 596
W+E + IH+F D SH R +EI
Sbjct: 578 WVELKGHIHQFCTGDESHPRQKEI 601
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 107/408 (26%), Positives = 174/408 (42%), Gaps = 43/408 (10%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y G L A+++F+ +P R+ +SWN + NG + A + + M N+ +
Sbjct: 148 YADLGDLTAARELFERIPRRNVMSWNILFGGYIKNGDLGGARKLFDEMPE-----RNVAT 202
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W+A++ G T G+DEE++G M+ EG+ P+ L SV CA L+ + G++ H Y+
Sbjct: 203 WNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVV 262
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
R+G + V + L +Y RCG + + + VSCNTII G +NG+ A E
Sbjct: 263 RSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALE 322
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
F M +GV ++ TF S + +C
Sbjct: 323 YFCMMRSVGVAADVV------------------------------------TFVSAISSC 346
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK 301
+D+ +L +G++IH + G+ V LV MY R L ++ F + L
Sbjct: 347 SDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLS 406
Query: 302 MKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRC 361
+ + + A++LF +M++ P T +L ACS E G +
Sbjct: 407 AMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKT 466
Query: 362 -GYDSDVHIGTALVDMYAKCGSLKHAR-LAYKRISTPDLVSQNAMLTA 407
G V T +VD+ + G L A L TPD V +L+A
Sbjct: 467 YGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSA 514
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 118/280 (42%), Gaps = 40/280 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +CG L + + V +M+P VS N+
Sbjct: 279 MYMRCGCLQEGEAVLRMLPSLSIVSCNT-------------------------------- 306
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+I G TQNG E A+ M++ G+ + T S + +C+ L L+ G++ HG +
Sbjct: 307 ----IIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQV 362
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G V+ LV +Y RCG + + ++F + + + +I Y +G+ +A
Sbjct: 363 MKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGFHGHGQKAI 422
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
ELF QM + G + +++ +++ + L +E F + G++P+ + V+
Sbjct: 423 ELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQPSVKHYTCVVDL 482
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQ 280
L E AL +++ L D + L+ C+ Q
Sbjct: 483 LGRSGCL---DEAEALILSMPLTPDGVIWKTLLSA-CKTQ 518
>gi|147819295|emb|CAN68962.1| hypothetical protein VITISV_019277 [Vitis vinifera]
Length = 676
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 190/582 (32%), Positives = 303/582 (52%), Gaps = 77/582 (13%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY CG ++ A++VF +M ER LV
Sbjct: 167 MYMNCGEMEVARRVFDLMRER------------------------------------TLV 190
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ +I G+ +NG +EA+ + M +G+EP+ T+ SVLP C+ L++L +G+ H +
Sbjct: 191 SWNTMINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALV 250
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ V N L+D+Y +CG+M EA+
Sbjct: 251 EVKNLGEDISVWNSLLDMYAKCGNM-------------------------------DEAQ 279
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+F +M+ +R ++SW +M++GY+ N A + ++ + ++P T SVL A
Sbjct: 280 MIFYEMD----KRDVVSWTTMMNGYILNGDARSAL-LLCQMMQFESVKPNFVTLASVLSA 334
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA + SL+ G+ +H AI L+S+ V AL++MY + ++ + F +
Sbjct: 335 CASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSFRVFSKXSKQRTAPW 394
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G N + A++LF +ML + P+ T+ +L A + L +++ + +H Y IR
Sbjct: 395 NAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIR 454
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPD--LVSQNAMLTAYAMHGHGKEGI 418
G+ S + + T L+D+Y+KCGSL+ A + I D +++ +A++ Y MHGHG+ I
Sbjct: 455 SGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAIIAGYGMHGHGETAI 514
Query: 419 AHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLK--HYTCMVD 476
+ F +++ SG +P+ I+F S L AC HAG + G F M D + SL+ HYTC++D
Sbjct: 515 SLFDQMVQSGVKPNEITFTSILHACSHAGLVDEGLGLFKFM-LEDNQMSLRTDHYTCVID 573
Query: 477 LLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGN 536
LL RAG L EAYE I+ + P+ +WGALLG CV H N+E G++AA L ELEP NTGN
Sbjct: 574 LLGRAGRLEEAYELIRTMAFRPNHAVWGALLGSCVIHENVELGEVAAKWLFELEPGNTGN 633
Query: 537 YVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRD 578
YV+LAN+++ GRW D R M + + K+P S IE R+
Sbjct: 634 YVLLANIYSAVGRWRDAEHVRLMMNNIGLRKTPAHSLIEVRN 675
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/463 (23%), Positives = 201/463 (43%), Gaps = 41/463 (8%)
Query: 99 SVLPACARLQKLSLGKEFHGYITRNGFMSNPF---VVNGLVDVYRRCGDMLSALKIFSKF 155
S+L C + + K+ H + G +S+P+ +++ L Y CG
Sbjct: 23 SLLQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLLSSLAAAYAMCG------------ 70
Query: 156 SIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAF 215
C AR+LFD++ + + SWN+MI Y ++ L +A
Sbjct: 71 ---------------C----APHARKLFDELRN----PSLFSWNAMIRMYTNSGLSYDAL 107
Query: 216 SMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEM 275
+F +L P ++T+ V+ AC D G IHA + G SD FV +L+ M
Sbjct: 108 GLFVQMLASGRRWPDNYTYPFVIKACGDYLLPEMGALIHARTVMSGFDSDAFVQNSLMAM 167
Query: 276 YCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTV 335
Y ++ A+ FD + + +G+ N A+ +F M+ + PD TV
Sbjct: 168 YMNCGEMEVARRVFDLMRERTLVSWNTMINGYFKNGCVKEALMVFDWMIGKGIEPDCATV 227
Query: 336 GIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST 395
+L CS L +E G++VHA D+ + +L+DMYAKCG++ A++ + +
Sbjct: 228 VSVLPVCSYLKELEVGRRVHALVEVKNLGEDISVWNSLLDMYAKCGNMDEAQMIFYEMDK 287
Query: 396 PDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEF 455
D+VS M+ Y ++G + + + + +P+ ++ S LSAC S+K G
Sbjct: 288 RDVVSWTTMMNGYILNGDARSALLLCQMMQFESVKPNFVTLASVLSACASLYSLKHGRCL 347
Query: 456 FDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
++ + T ++D+ ++ + ++ K + W A++ GC+ H
Sbjct: 348 HGWAIRQKLESEVIVETALIDMYAKCNNVNLSFRVFSKXS-KQRTAPWNAIISGCI-HNG 405
Query: 516 LEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQ 558
L I + + +E + + + + L AYA +DL + R
Sbjct: 406 LSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFL-TDLQQARN 447
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 147/334 (44%), Gaps = 43/334 (12%)
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMA---FD 290
+ S+L C S+ K+IHA I LGL S + L + Y A A FD
Sbjct: 21 YQSLLQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLLSSLAAAYAMCGCAPHARKLFD 80
Query: 291 EIENIENLLGKMKEDGFEPNVYTWNAM--------------QLFSEML-SLDLTPDIYTV 335
E+ N P++++WNAM LF +ML S PD YT
Sbjct: 81 ELRN--------------PSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTY 126
Query: 336 GIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST 395
++ AC E G +HA + G+DSD + +L+ MY CG ++ AR + +
Sbjct: 127 PFVIKACGDYLLPEMGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRE 186
Query: 396 PDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEF 455
LVS N M+ Y +G KE + F ++ G PD + +S L C + ++ G
Sbjct: 187 RTLVSWNTMINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRV 246
Query: 456 FDLMAYYDVKPSLKHYTCMVDLLSRAGELGEA----YEFIKKIPMAPDSVMWGALLGGCV 511
L+ ++ + + ++D+ ++ G + EA YE K+ D V W ++ G +
Sbjct: 247 HALVEVKNLGEDISVWNSLLDMYAKCGNMDEAQMIFYEMDKR-----DVVSWTTMMNGYI 301
Query: 512 SHGNLEFGQIAADRLIELEPNNTGNYVMLANLFA 545
+G+ + ++++ E N+V LA++ +
Sbjct: 302 LNGDARSALLLC-QMMQFESVKP-NFVTLASVLS 333
>gi|449441574|ref|XP_004138557.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 183/547 (33%), Positives = 288/547 (52%), Gaps = 38/547 (6%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
N+VSW+A+I GFT N +A + RM EG+ P+A+T V A L+ ++ KE
Sbjct: 236 NVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVS 295
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
GY G SN V L+D+ +CG +
Sbjct: 296 GYALELGVDSNTLVGTALIDMNSKCGSL-------------------------------Q 324
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
EAR +F+ H R WN+MISGY+ + ++A +F + D I +T+ SV
Sbjct: 325 EARSIFN--SHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQND-IYLDHYTYCSV 381
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTF-VGGALVEMYCRYQDLVAAQMAFDEIENIE 296
A A + L GK++HA AI GL+ + + A+ Y + L + F+ +E+
Sbjct: 382 FNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMED-R 440
Query: 297 NLLGKMKEDGFEPNVYTWN-AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVH 355
+L+ W+ A+++FS M + + P+ +T +L +C++L +E G+QVH
Sbjct: 441 DLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVH 500
Query: 356 AYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGK 415
+ G D D I +ALVDMYAKCG L A+ + RIS D VS A++ +A HG
Sbjct: 501 GIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNADTVSWTAIIAGHAQHGIVD 560
Query: 416 EGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCM 474
+ + FRR++ G P+ ++FL L AC H G ++ G ++F LM Y + P ++HY C+
Sbjct: 561 DALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEEGLQYFKLMKKTYGLVPEMEHYACI 620
Query: 475 VDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNT 534
VDLLSR G L +A EFI ++P+ P+ ++W LLG C HGN+E G++AA +++ + N+
Sbjct: 621 VDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLGACRVHGNVELGELAAQKILSFKAENS 680
Query: 535 GNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSE 594
YV+L+N + +G + D R MK++ + K PGCSWI +HKF A D+ H +
Sbjct: 681 ATYVLLSNTYIESGSYKDGLSLRHLMKEQGVKKEPGCSWISVNGTLHKFYAGDQQHPEKD 740
Query: 595 EIYTIID 601
+IY ++
Sbjct: 741 KIYAKLE 747
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 116/469 (24%), Positives = 197/469 (42%), Gaps = 83/469 (17%)
Query: 95 RTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVV--NGLVDVYRRCGDMLSALKIF 152
+ L +L C + L K HG++ ++ F ++ +V N + Y +C D+ +A ++F
Sbjct: 69 QPLVDLLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLF 128
Query: 153 SKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYD 212
+ S +N S +I G ENG + E F +M+
Sbjct: 129 DQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQ------------------------- 163
Query: 213 EAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGAL 272
GI P F + +L C ++S+ G +HA + G S TFV AL
Sbjct: 164 -----------SQGIFPDQFAYSGILQICIGLDSIELGNMVHAQIVIRGFTSHTFVSTAL 212
Query: 273 VEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDI 332
+ MY + Q++ + F+ + + + GF N +A LF M+ +TPD
Sbjct: 213 LNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDA 272
Query: 333 YTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYK- 391
T + A L + + K+V YA+ G DS+ +GTAL+DM +KCGSL+ AR +
Sbjct: 273 QTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNS 332
Query: 392 -----RISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSAC--- 443
R + P NAM++ Y G ++ + F ++ + DH ++ S +A
Sbjct: 333 HFITCRFNAP----WNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNAIAAL 388
Query: 444 --------VHAGSIKTGSE-------------FFDLMAYYDVKP--------SLKHYTCM 474
VHA +IK+G E + + DV+ L +T +
Sbjct: 389 KCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSL 448
Query: 475 VDLLSRAGELGEAYEFIKKIP---MAPDSVMWGALLGGCVSHGNLEFGQ 520
V S+ E +A E + +AP+ + ++L C + LE+GQ
Sbjct: 449 VTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQ 497
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 95/198 (47%), Gaps = 10/198 (5%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG L DAKKVF + D VSW +++ A +G+V +AL+ RM L E PN V
Sbjct: 521 MYAKCGCLGDAKKVFNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVE-PNAV 579
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
++ V+ + G EE + M+ GL P + ++ +R+ L+ EF
Sbjct: 580 TFLCVLFACSHGGLVEEGLQYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLNDAMEF--- 636
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDM----LSALKIFSKFSIKNEVSCNTIIVGYCENGN 175
I+R N V L+ R G++ L+A KI S F +N + + Y E+G+
Sbjct: 637 ISRMPVEPNEMVWQTLLGACRVHGNVELGELAAQKILS-FKAENSATYVLLSNTYIESGS 695
Query: 176 VAEARELFDQMEHLGVQR 193
+ L M+ GV++
Sbjct: 696 YKDGLSLRHLMKEQGVKK 713
>gi|356511287|ref|XP_003524358.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 674
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 176/581 (30%), Positives = 307/581 (52%), Gaps = 40/581 (6%)
Query: 27 NSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQ 86
N+VV C L + ++ + TP+ ++W +I + +G ++ ++
Sbjct: 16 NTVVPTCHVKQLHAQIVKTTK-------ATPHSLAWICIIKCYASHGLLRHSLASFNLLR 68
Query: 87 AEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDML 146
+ G+ P+ S+L A + +L + H + R GF + + N L+++Y + L
Sbjct: 69 SFGISPDRHLFPSLLRASTLFKHFNLAQSLHAAVIRLGFHFDLYTANALMNMYSKFHPHL 128
Query: 147 SALKIF--------SKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISW 198
S L F +K+S+K + R+LFD+M R ++SW
Sbjct: 129 SPLHEFPQARHNHNNKYSVK-----------------IDSVRKLFDRMP----VRDVVSW 167
Query: 199 NSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAI 258
N++I+G N +Y+EA +M +++ ++ + P SFT S+L + ++ KGKEIH AI
Sbjct: 168 NTVIAGNAQNGMYEEALNMVKEM-GKENLRPDSFTLSSILPIFTEHANVTKGKEIHGYAI 226
Query: 259 ALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQ 318
G D F+G +L++MY + + + AF + N + + G N +
Sbjct: 227 RHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISWNSIIAGCVQNGRFDQGLG 286
Query: 319 LFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYA 378
F ML + P + ++ AC+ L + GKQ+HAY IR G+D + I ++L+DMYA
Sbjct: 287 FFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYIIRLGFDDNKFIASSLLDMYA 346
Query: 379 KCGSLKHARLAYKRIST--PDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISF 436
KCG++K AR + +I D+VS A++ AMHGH + ++ F +L G +P +++F
Sbjct: 347 KCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHALDAVSLFEEMLVDGVKPCYVAF 406
Query: 437 LSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIP 495
++ L+AC HAG + G ++F+ M + V P L+HY + DLL RAG L EAY+FI +
Sbjct: 407 MAVLTACSHAGLVDEGWKYFNSMQRDFGVAPGLEHYAAVADLLGRAGRLEEAYDFISNMG 466
Query: 496 MAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLAR 555
P +W LL C +H N+E + ++++ ++P N G +V+++N+++ A RW D A+
Sbjct: 467 EEPTGSVWSTLLAACRAHKNIELAEKVVNKILLVDPGNMGAHVIMSNIYSAAQRWRDAAK 526
Query: 556 TRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEI 596
R +M+ + K+P CSWIE +++H F A D+SH ++I
Sbjct: 527 LRVRMRKTGLKKTPACSWIEVGNKVHTFLAGDKSHPYYDKI 567
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 98/382 (25%), Positives = 168/382 (43%), Gaps = 75/382 (19%)
Query: 8 LDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIG 67
+D +K+F MP RD VSWN+V+ A NG+ EAL ++ M
Sbjct: 149 IDSVRKLFDRMPVRDVVSWNTVIAGNAQNGMYEEALNMVKEMGK---------------- 192
Query: 68 GFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMS 127
E L P++ TLSS+LP ++ GKE HGY R+GF
Sbjct: 193 --------------------ENLRPDSFTLSSILPIFTEHANVTKGKEIHGYAIRHGFDK 232
Query: 128 NPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQME 187
+ F+ + L+D+Y +C + ++ F S ++ +S N+II G +NG
Sbjct: 233 DVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISWNSIIAGCVQNGR------------ 280
Query: 188 HLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSL 247
+D+ FR +L ++ ++P +F SV+ ACA + +L
Sbjct: 281 -----------------------FDQGLGFFRRML-KEKVKPMQVSFSSVIPACAHLTAL 316
Query: 248 RKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKED-- 305
GK++HA I LG + F+ +L++MY + ++ A+ F++IE + +
Sbjct: 317 NLGKQLHAYIIRLGFDDNKFIASSLLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIM 376
Query: 306 GFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG-KQVHAYAIRCGYD 364
G + + +A+ LF EML + P +L+ACS ++ G K ++ G
Sbjct: 377 GCAMHGHALDAVSLFEEMLVDGVKPCYVAFMAVLTACSHAGLVDEGWKYFNSMQRDFGVA 436
Query: 365 SDVHIGTALVDMYAKCGSLKHA 386
+ A+ D+ + G L+ A
Sbjct: 437 PGLEHYAAVADLLGRAGRLEEA 458
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 110/231 (47%), Gaps = 38/231 (16%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC ++ + F ++ RD +SWNS++ C NG + L
Sbjct: 243 MYAKCTQVELSVCAFHLLSNRDAISWNSIIAGCVQNGRFDQGL----------------- 285
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
G RM E ++P + SSV+PACA L L+LGK+ H YI
Sbjct: 286 -------------------GFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYI 326
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSI--KNEVSCNTIIVGYCENGNVAE 178
R GF N F+ + L+D+Y +CG++ A IF+K + ++ VS II+G +G+ +
Sbjct: 327 IRLGFDDNKFIASSLLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHALD 386
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEP 229
A LF++M GV+ +++ ++++ L DE + F + G+ P
Sbjct: 387 AVSLFEEMLVDGVKPCYVAFMAVLTACSHAGLVDEGWKYFNSMQRDFGVAP 437
>gi|224057914|ref|XP_002299387.1| predicted protein [Populus trichocarpa]
gi|222846645|gb|EEE84192.1| predicted protein [Populus trichocarpa]
Length = 814
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 194/625 (31%), Positives = 317/625 (50%), Gaps = 95/625 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G LDDAK + + +RD LV
Sbjct: 159 MYAKLGRLDDAKSLLVLFEDRD------------------------------------LV 182
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+++I F+QN EA+ L M EG++P+ T +SVLPAC+ L L GKE H Y
Sbjct: 183 TWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIHAYA 242
Query: 121 TR-NGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
R + + N FV + LVD+Y C G V
Sbjct: 243 LRTDDVIENSFVGSALVDMY-------------------------------CNCGQVESG 271
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
R +FD + + R I WN+MI+GY + ++A +F ++ G+ + T S++
Sbjct: 272 RLVFDSV----LDRKIGLWNAMIAGYAQSEHDEKALMLFIEMEAAAGLYSNATTMSSIVP 327
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
A + + + IH I GL+++ ++ AL++MY R D+ ++ FD +E+ + +
Sbjct: 328 AYVRCEGISRKEGIHGYVIKRGLETNRYLQNALIDMYSRMGDIKTSKRIFDSMEDRDIVS 387
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLD----------------LTPDIYTVGIILSACS 343
+ + +A+ L EM ++ P+ T+ +L C+
Sbjct: 388 WNTIITSYVICGRSSDALLLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSITLMTVLPGCA 447
Query: 344 SLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNA 403
SL+ + +GK++HAYAIR S V +G+ALVDMYAKCG L AR + ++ ++++ N
Sbjct: 448 SLSALAKGKEIHAYAIRNLLASQVTVGSALVDMYAKCGCLNLARRVFDQMPIRNVITWNV 507
Query: 404 MLTAYAMHGHGKEGIAHFRRILASG-----FRPDHISFLSALSACVHAGSIKTGSEFFDL 458
++ AY MHG GKE + F ++A G +P ++F++ ++C H+G + G F
Sbjct: 508 IIMAYGMHGKGKESLELFEDMVAEGAKGGEVKPTEVTFIALFASCSHSGMVDEGLSLFHK 567
Query: 459 MA-YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSV-MWGALLGGCVSHGNL 516
M + ++P+ HY C+VDL+ RAG++ EAY + +P D V W +LLG C + N+
Sbjct: 568 MKNEHGIEPAPDHYACIVDLVGRAGKVEEAYGLVNTMPSGFDKVGAWSSLLGACRIYHNI 627
Query: 517 EFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIED 576
E G+IAA+ L++L+P+ +YV+L+N+++ AG W R++MK + K PGCSWIE
Sbjct: 628 EIGEIAAENLLQLQPDVASHYVLLSNIYSSAGLWDKAMNLRRRMKAMGVKKEPGCSWIEY 687
Query: 577 RDEIHKFRASDRSHDRSEEIYTIID 601
DE+HKF A D SH +SE+++ ++
Sbjct: 688 GDEVHKFLAGDLSHPQSEKLHDFLE 712
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 140/536 (26%), Positives = 237/536 (44%), Gaps = 95/536 (17%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKCG L DA KVF + ERD V
Sbjct: 56 MYGKCGGLGDAYKVFDRITERD------------------------------------QV 79
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQK---LSLGKEFH 117
SW+++I + E AI M EG EP++ TL S+ AC+ L+K L LGK+ H
Sbjct: 80 SWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMALACSNLRKRDGLWLGKQIH 139
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
G R G + FS N ++ Y + G +
Sbjct: 140 GCCFRKGHW-----------------------RTFSN---------NALMAMYAKLGRLD 167
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
+A+ L E R +++WNSMIS + N + EA MF L++ +G++P TF SV
Sbjct: 168 DAKSLLVLFE----DRDLVTWNSMISSFSQNERFMEAL-MFLRLMVLEGVKPDGVTFASV 222
Query: 238 LIACADMNSLRKGKEIHALAIAL-GLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
L AC+ ++ LR GKEIHA A+ + ++FVG ALV+MYC + + ++ FD + + +
Sbjct: 223 LPACSHLDLLRTGKEIHAYALRTDDVIENSFVGSALVDMYCNCGQVESGRLVFDSVLDRK 282
Query: 297 NLLGKMKEDGFEPNVYTWNAMQLFSEM-LSLDLTPDIYTVGIILSACSSLATMERGKQVH 355
L G+ + + A+ LF EM + L + T+ I+ A + R + +H
Sbjct: 283 IGLWNAMIAGYAQSEHDEKALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEGIH 342
Query: 356 AYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGK 415
Y I+ G +++ ++ AL+DMY++ G +K ++ + + D+VS N ++T+Y + G
Sbjct: 343 GYVIKRGLETNRYLQNALIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGRSS 402
Query: 416 EGIA---HFRRILASG-------------FRPDHISFLSALSACVHAGSIKTGSEFFDLM 459
+ + +RI F+P+ I+ ++ L C ++ G E
Sbjct: 403 DALLLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSITLMTVLPGCASLSALAKGKEIHAYA 462
Query: 460 AYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
+ + + +VD+ ++ G L A ++P+ + + W ++ HG
Sbjct: 463 IRNLLASQVTVGSALVDMYAKCGCLNLARRVFDQMPIR-NVITWNVIIMAYGMHGK 517
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 110/430 (25%), Positives = 190/430 (44%), Gaps = 45/430 (10%)
Query: 85 MQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGF--MSNPFVVNGLVDVYRRC 142
M G P+ +VL A A +Q+L LGK+ H ++ + G+ S+ + N LV++Y +C
Sbjct: 1 MIGSGFSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKC 60
Query: 143 GDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMI 202
G + A K+F + + +++VS N+II C F++
Sbjct: 61 GGLGDAYKVFDRITERDQVSWNSIISALCR----------FEE----------------- 93
Query: 203 SGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADM---NSLRKGKEIHALAIA 259
++ A FR +LM +G EP+SFT S+ +AC+++ + L GK+IH
Sbjct: 94 --------WEVAIKAFRLMLM-EGFEPSSFTLVSMALACSNLRKRDGLWLGKQIHGCCFR 144
Query: 260 LGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQL 319
G TF AL+ MY + L A+ E+ + + F N A+
Sbjct: 145 KG-HWRTFSNNALMAMYAKLGRLDDAKSLLVLFEDRDLVTWNSMISSFSQNERFMEALMF 203
Query: 320 FSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRC-GYDSDVHIGTALVDMYA 378
M+ + PD T +L ACS L + GK++HAYA+R + +G+ALVDMY
Sbjct: 204 LRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIHAYALRTDDVIENSFVGSALVDMYC 263
Query: 379 KCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRI-LASGFRPDHISFL 437
CG ++ RL + + + NAM+ YA H ++ + F + A+G + +
Sbjct: 264 NCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQSEHDEKALMLFIEMEAAAGLYSNATTMS 323
Query: 438 SALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMA 497
S + A V I + ++ + ++D+ SR G++ + +
Sbjct: 324 SIVPAYVRCEGISRKEGIHGYVIKRGLETNRYLQNALIDMYSRMGDIKTSKRIFDSME-D 382
Query: 498 PDSVMWGALL 507
D V W ++
Sbjct: 383 RDIVSWNTII 392
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 144/327 (44%), Gaps = 35/327 (10%)
Query: 222 LMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQS--DTFVGGALVEMYCRY 279
++ G P +F F +VL A A + L GK+IHA G S + LV MY +
Sbjct: 1 MIGSGFSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKC 60
Query: 280 QDLVAAQMAFDEI--------ENIENLLGKMKEDGFEPNVYTWN-AMQLFSEMLSLDLTP 330
L A FD I +I + L + +E W A++ F ML P
Sbjct: 61 GGLGDAYKVFDRITERDQVSWNSIISALCRFEE---------WEVAIKAFRLMLMEGFEP 111
Query: 331 DIYTVGIILSACSSLATME---RGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHAR 387
+T+ + ACS+L + GKQ+H R G+ AL+ MYAK G L A+
Sbjct: 112 SSFTLVSMALACSNLRKRDGLWLGKQIHGCCFRKGHWRTFS-NNALMAMYAKLGRLDDAK 170
Query: 388 LAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAG 447
DLV+ N+M+++++ + E + R ++ G +PD ++F S L AC H
Sbjct: 171 SLLVLFEDRDLVTWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLD 230
Query: 448 SIKTGSEFFDLMAYY----DVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMW 503
++TG E + AY DV + + +VD+ G++ E+ + + +W
Sbjct: 231 LLRTGKE---IHAYALRTDDVIENSFVGSALVDMYCNCGQV-ESGRLVFDSVLDRKIGLW 286
Query: 504 GALLGGCVSHGNLEFGQIAADRLIELE 530
A++ G + E + A IE+E
Sbjct: 287 NAMIAG---YAQSEHDEKALMLFIEME 310
>gi|125589995|gb|EAZ30345.1| hypothetical protein OsJ_14392 [Oryza sativa Japonica Group]
Length = 704
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 186/604 (30%), Positives = 316/604 (52%), Gaps = 52/604 (8%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y C LD A+ +F + + + W+ +V A L+ +AL+ L+RM + +L +
Sbjct: 112 YSSCLDLDAARTLFDTLHANNELLWSPMVVALVRFNLLSDALDLLQRMPP----SRDLFA 167
Query: 62 WSAVIGGFTQ--NGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEFHG 118
W+A+I G+ + N Y +++ + ++ AE G+ PN T SVL AC ++ L G+ HG
Sbjct: 168 WTAIISGYARGANEYCCKSLELFVQLLAEDGVMPNEFTYDSVLRACVKMGALEFGRSIHG 227
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
+ ++GF S + + LVD+Y R G + A+ +++ + + ++ NT+I G+ G +
Sbjct: 228 CLIQSGFESEQLITSALVDLYCRSGAVDDAVMVYNGLQMPSLITSNTLIAGFISMGRTED 287
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
A+ +F QM + S+N MI Y D ++ MF + R+ + T S++
Sbjct: 288 AKLVFSQM----TEHDSGSYNLMIKAYADEGRLEDCRRMFEMMPRRNMV-----TLNSMM 338
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
L +G+++ F++I++ N
Sbjct: 339 SVLLQNGKLEEGRKL-----------------------------------FEQIKDERNT 363
Query: 299 LG-KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAY 357
+ G+ N + A++LF+ M L + T +L AC+++ T+E+GK VHA
Sbjct: 364 VTWNSMISGYVQNDQSSEALKLFAVMCRLSIECSASTFPALLHACATIGTIEQGKMVHAL 423
Query: 358 AIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEG 417
+ ++S+ ++GTALVDMY+KCG + AR A+ I +P++ S +++ A +GH E
Sbjct: 424 LCKTPFESNGYVGTALVDMYSKCGCVSDARAAFSCIMSPNVASWTSLINGLAQNGHWMEA 483
Query: 418 IAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDL 477
I F R+L + +P+ I+FL L A AG + G FF M Y V P+++HYTC VDL
Sbjct: 484 IVQFARMLKNNVKPNEITFLGILMASARAGLVNKGMRFFHSMESYGVVPTVEHYTCAVDL 543
Query: 478 LSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNY 537
L RA + EA +FI K+P+ D V+WGALL C +LE G+ A++L + + Y
Sbjct: 544 LGRARRVREAEKFISKMPIPADGVVWGALLTACWYTMDLEMGEKVAEKLFYMGTKHISAY 603
Query: 538 VMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
V ++N++A G+W D+ + R +++ K PGCSWIE +D +H F DR+H EEIY
Sbjct: 604 VAMSNIYAKLGKWEDVVKVRTRLRSINAKKEPGCSWIEVKDMVHVFLVEDRNHPEREEIY 663
Query: 598 TIID 601
+++
Sbjct: 664 LMLE 667
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 115/478 (24%), Positives = 219/478 (45%), Gaps = 17/478 (3%)
Query: 60 VSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
+SW+A + + G +A+G RM + T +S L ACAR + L +G + H
Sbjct: 33 LSWNATVAAHARRGRVRDALGTAARMHRSAAGLDEATYASALGACARGRCLRMGWQVHCQ 92
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ ++G P V L+D Y C D+ +A +F NE+ + ++V +++A
Sbjct: 93 VVKSGSDDFPVVGASLLDFYSSCLDLDAARTLFDTLHANNELLWSPMVVALVRFNLLSDA 152
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVD--NSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
+L +M R + +W ++ISGY N ++ +F LL DG+ P FT+ SV
Sbjct: 153 LDLLQRMPP---SRDLFAWTAIISGYARGANEYCCKSLELFVQLLAEDGVMPNEFTYDSV 209
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
L AC M +L G+ IH I G +S+ + ALV++YCR + A M ++ ++
Sbjct: 210 LRACVKMGALEFGRSIHGCLIQSGFESEQLITSALVDLYCRSGAVDDAVMVYNGLQMPSL 269
Query: 298 LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAY 357
+ GF T +A +FS+M D + +++ A + +E +++
Sbjct: 270 ITSNTLIAGFISMGRTEDAKLVFSQMTEHDSG----SYNLMIKAYADEGRLEDCRRMFEM 325
Query: 358 AIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTP-DLVSQNAMLTAYAMHGHGKE 416
R ++ +++ + + G L+ R +++I + V+ N+M++ Y + E
Sbjct: 326 MPR----RNMVTLNSMMSVLLQNGKLEEGRKLFEQIKDERNTVTWNSMISGYVQNDQSSE 381
Query: 417 GIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVD 476
+ F + +F + L AC G+I+ G L+ + + T +VD
Sbjct: 382 ALKLFAVMCRLSIECSASTFPALLHACATIGTIEQGKMVHALLCKTPFESNGYVGTALVD 441
Query: 477 LLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIE--LEPN 532
+ S+ G + +A I M+P+ W +L+ G +G+ + R+++ ++PN
Sbjct: 442 MYSKCGCVSDARAAFSCI-MSPNVASWTSLINGLAQNGHWMEAIVQFARMLKNNVKPN 498
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 54/116 (46%), Gaps = 1/116 (0%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG + DA+ F + + SW S++ A NG +EA+ RM +N PN +
Sbjct: 442 MYSKCGCVSDARAAFSCIMSPNVASWTSLINGLAQNGHWMEAIVQFARMLK-NNVKPNEI 500
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEF 116
++ ++ + G + + M++ G+ P + + R +++ ++F
Sbjct: 501 TFLGILMASARAGLVNKGMRFFHSMESYGVVPTVEHYTCAVDLLGRARRVREAEKF 556
>gi|414884091|tpg|DAA60105.1| TPA: hypothetical protein ZEAMMB73_697281 [Zea mays]
Length = 734
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 185/599 (30%), Positives = 320/599 (53%), Gaps = 25/599 (4%)
Query: 11 AKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETP--NLVSWSAVIGG 68
AKK R CV +SV+ A GL + + TP +L +W+++I G
Sbjct: 51 AKKAIHRQSVRGCVPSSSVI----ARGL--------HNAHRVFDGTPTRSLPAWTSIISG 98
Query: 69 FTQNGYDEEAIGMLFRMQAE--GLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFM 126
+ G + + M E PNA L+ VL CA L + G+ HG+I R+G
Sbjct: 99 CAREGRHADGMRAFAEMLDECGATAPNAFVLAGVLRCCAGLGDVESGRRIHGWILRSGVC 158
Query: 127 SNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQM 186
+ + N ++D+Y +CGD A + F + K+ S N +I ++G++ A +LFD+
Sbjct: 159 PDVVLCNAVLDMYAKCGDHGRARRAFGAMAQKDATSWNIVIRACLQDGDLVGATQLFDE- 217
Query: 187 EHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNS 246
R + SWN+++SG + + EA + ++ R G+ +++T+ V ++S
Sbjct: 218 ---SSLRDVSSWNTIVSGLMRHGHTTEALGRLQQMV-RAGVTFSNYTYSMVFALAGLLSS 273
Query: 247 LRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI---ENLLGKMK 303
G+++H + L+ D FVG +L++MYC+ ++ +A FD +
Sbjct: 274 RDLGRQLHGRVVVAVLEEDAFVGCSLMDMYCKCGEMESALSIFDRWSDFTEDRQFAWSTM 333
Query: 304 EDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGY 363
G+ N A++ F ML + + + + SAC++ +E+G+QVH + + G+
Sbjct: 334 VAGYVQNGREEEALEFFRRMLREGVPAGQFILTSVASACANAGMVEQGRQVHGFVEKLGH 393
Query: 364 DSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRR 423
D + +A+VDMY+K GSL+ A ++ T ++ ML +YA HG G+ + F R
Sbjct: 394 RFDAPLASAIVDMYSKSGSLEDACRIFRSAQTKNVALWTTMLCSYASHGQGRMALEIFSR 453
Query: 424 ILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAG 482
+ A P+ I+ ++ LSAC H+G + G +F+LM Y + P+ +HY CMVDL RAG
Sbjct: 454 MKAEKIMPNEITLVAVLSACSHSGLVSDGYHYFNLMQEEYGIVPNTEHYNCMVDLYGRAG 513
Query: 483 ELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLAN 542
L +A FI++ ++ ++V+W LL C H ++E+ Q+A+++L++LE + G+YV+++N
Sbjct: 514 LLDKAKNFIEENKISHEAVVWKTLLSACRLHKHIEYAQLASEKLVQLEQYDAGSYVLMSN 573
Query: 543 LFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
++A +W D + R MK+RR+ K PG SWI ++ +H+F A D SH RS EIY ++
Sbjct: 574 MYATNNKWLDTFKLRSSMKERRVRKQPGQSWIHLKNVVHRFVALDTSHPRSAEIYAYLE 632
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 110/421 (26%), Positives = 187/421 (44%), Gaps = 52/421 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG A++ F M ++D SWN V+ AC +G ++ A + + S D +
Sbjct: 170 MYAKCGDHGRARRAFGAMAQKDATSWNIVIRACLQDGDLVGATQLFDESSLRD-----VS 224
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ ++ G ++G+ EA+G L +M G+ + T S V L LG++ HG +
Sbjct: 225 SWNTIVSGLMRHGHTTEALGRLQQMVRAGVTFSNYTYSMVFALAGLLSSRDLGRQLHGRV 284
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIF---SKFSIKNEVSCNTIIVGYCENGNVA 177
+ FV L+D+Y +CG+M SAL IF S F+ + + +T++ GY +NG
Sbjct: 285 VVAVLEEDAFVGCSLMDMYCKCGEMESALSIFDRWSDFTEDRQFAWSTMVAGYVQNGREE 344
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
EA E F +M +R+G+ F SV
Sbjct: 345 EALEFFRRM------------------------------------LREGVPAGQFILTSV 368
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
ACA+ + +G+++H LG + D + A+V+MY + L A F +
Sbjct: 369 ASACANAGMVEQGRQVHGFVEKLGHRFDAPLASAIVDMYSKSGSLEDACRIFRSAQTKNV 428
Query: 298 LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAY 357
L + + A+++FS M + + P+ T+ +LSACS + G H +
Sbjct: 429 ALWTTMLCSYASHGQGRMALEIFSRMKAEKIMPNEITLVAVLSACSHSGLVSDG--YHYF 486
Query: 358 AI---RCGYDSDVHIGTALVDMYAKCGSLKHAR--LAYKRISTPDLVSQNAMLTAYAMHG 412
+ G + +VD+Y + G L A+ + +IS +V + +L+A +H
Sbjct: 487 NLMQEEYGIVPNTEHYNCMVDLYGRAGLLDKAKNFIEENKISHEAVVWKT-LLSACRLHK 545
Query: 413 H 413
H
Sbjct: 546 H 546
>gi|38347497|emb|CAE05845.2| OSJNBa0091C07.7 [Oryza sativa Japonica Group]
Length = 749
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 186/604 (30%), Positives = 316/604 (52%), Gaps = 52/604 (8%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y C LD A+ +F + + + W+ +V A L+ +AL+ L+RM + +L +
Sbjct: 157 YSSCLDLDAARTLFDTLHANNELLWSPMVVALVRFNLLSDALDLLQRMPP----SRDLFA 212
Query: 62 WSAVIGGFTQ--NGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEFHG 118
W+A+I G+ + N Y +++ + ++ AE G+ PN T SVL AC ++ L G+ HG
Sbjct: 213 WTAIISGYARGANEYCCKSLELFVQLLAEDGVMPNEFTYDSVLRACVKMGALEFGRSIHG 272
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
+ ++GF S + + LVD+Y R G + A+ +++ + + ++ NT+I G+ G +
Sbjct: 273 CLIQSGFESEQLITSALVDLYCRSGAVDDAVMVYNGLQMPSLITSNTLIAGFISMGRTED 332
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
A+ +F QM + S+N MI Y D ++ MF + R+ + T S++
Sbjct: 333 AKLVFSQM----TEHDSGSYNLMIKAYADEGRLEDCRRMFEMMPRRNMV-----TLNSMM 383
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
L +G+++ F++I++ N
Sbjct: 384 SVLLQNGKLEEGRKL-----------------------------------FEQIKDERNT 408
Query: 299 LG-KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAY 357
+ G+ N + A++LF+ M L + T +L AC+++ T+E+GK VHA
Sbjct: 409 VTWNSMISGYVQNDQSSEALKLFAVMCRLSIECSASTFPALLHACATIGTIEQGKMVHAL 468
Query: 358 AIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEG 417
+ ++S+ ++GTALVDMY+KCG + AR A+ I +P++ S +++ A +GH E
Sbjct: 469 LCKTPFESNGYVGTALVDMYSKCGCVSDARAAFSCIMSPNVASWTSLINGLAQNGHWMEA 528
Query: 418 IAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDL 477
I F R+L + +P+ I+FL L A AG + G FF M Y V P+++HYTC VDL
Sbjct: 529 IVQFARMLKNNVKPNEITFLGILMASARAGLVNKGMRFFHSMESYGVVPTVEHYTCAVDL 588
Query: 478 LSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNY 537
L RA + EA +FI K+P+ D V+WGALL C +LE G+ A++L + + Y
Sbjct: 589 LGRARRVREAEKFISKMPIPADGVVWGALLTACWYTMDLEMGEKVAEKLFYMGTKHISAY 648
Query: 538 VMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
V ++N++A G+W D+ + R +++ K PGCSWIE +D +H F DR+H EEIY
Sbjct: 649 VAMSNIYAKLGKWEDVVKVRTRLRSINAKKEPGCSWIEVKDMVHVFLVEDRNHPEREEIY 708
Query: 598 TIID 601
+++
Sbjct: 709 LMLE 712
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 115/478 (24%), Positives = 219/478 (45%), Gaps = 17/478 (3%)
Query: 60 VSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
+SW+A + + G +A+G RM + T +S L ACAR + L +G + H
Sbjct: 78 LSWNATVAAHARRGRVRDALGTAARMHRSAAGLDEATYASALGACARGRCLRMGWQVHCQ 137
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ ++G P V L+D Y C D+ +A +F NE+ + ++V +++A
Sbjct: 138 VVKSGSDDFPVVGASLLDFYSSCLDLDAARTLFDTLHANNELLWSPMVVALVRFNLLSDA 197
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVD--NSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
+L +M R + +W ++ISGY N ++ +F LL DG+ P FT+ SV
Sbjct: 198 LDLLQRMPP---SRDLFAWTAIISGYARGANEYCCKSLELFVQLLAEDGVMPNEFTYDSV 254
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
L AC M +L G+ IH I G +S+ + ALV++YCR + A M ++ ++
Sbjct: 255 LRACVKMGALEFGRSIHGCLIQSGFESEQLITSALVDLYCRSGAVDDAVMVYNGLQMPSL 314
Query: 298 LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAY 357
+ GF T +A +FS+M D + +++ A + +E +++
Sbjct: 315 ITSNTLIAGFISMGRTEDAKLVFSQMTEHDSG----SYNLMIKAYADEGRLEDCRRMFEM 370
Query: 358 AIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTP-DLVSQNAMLTAYAMHGHGKE 416
R ++ +++ + + G L+ R +++I + V+ N+M++ Y + E
Sbjct: 371 MPR----RNMVTLNSMMSVLLQNGKLEEGRKLFEQIKDERNTVTWNSMISGYVQNDQSSE 426
Query: 417 GIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVD 476
+ F + +F + L AC G+I+ G L+ + + T +VD
Sbjct: 427 ALKLFAVMCRLSIECSASTFPALLHACATIGTIEQGKMVHALLCKTPFESNGYVGTALVD 486
Query: 477 LLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIE--LEPN 532
+ S+ G + +A I M+P+ W +L+ G +G+ + R+++ ++PN
Sbjct: 487 MYSKCGCVSDARAAFSCI-MSPNVASWTSLINGLAQNGHWMEAIVQFARMLKNNVKPN 543
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 54/116 (46%), Gaps = 1/116 (0%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG + DA+ F + + SW S++ A NG +EA+ RM +N PN +
Sbjct: 487 MYSKCGCVSDARAAFSCIMSPNVASWTSLINGLAQNGHWMEAIVQFARMLK-NNVKPNEI 545
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEF 116
++ ++ + G + + M++ G+ P + + R +++ ++F
Sbjct: 546 TFLGILMASARAGLVNKGMRFFHSMESYGVVPTVEHYTCAVDLLGRARRVREAEKF 601
>gi|225452956|ref|XP_002279032.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39350
[Vitis vinifera]
gi|296082987|emb|CBI22288.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 190/582 (32%), Positives = 303/582 (52%), Gaps = 77/582 (13%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY CG ++ A++VF +M ER LV
Sbjct: 167 MYMNCGEMEVARRVFDLMRER------------------------------------TLV 190
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ +I G+ +NG +EA+ + M +G+EP+ T+ SVLP C+ L++L +G+ H +
Sbjct: 191 SWNTMINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALV 250
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ V N L+D+Y +CG+M EA+
Sbjct: 251 EVKNLGEDISVWNSLLDMYAKCGNM-------------------------------DEAQ 279
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+F +M+ +R ++SW +M++GY+ N A + ++ + ++P T SVL A
Sbjct: 280 MIFYEMD----KRDVVSWTTMMNGYILNGDARSAL-LLCQMMQFESVKPNFVTLASVLSA 334
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA + SL+ G+ +H AI L+S+ V AL++MY + ++ + F +
Sbjct: 335 CASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSFRVFSKTSKQRTAPW 394
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G N + A++LF +ML + P+ T+ +L A + L +++ + +H Y IR
Sbjct: 395 NAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIR 454
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPD--LVSQNAMLTAYAMHGHGKEGI 418
G+ S + + T L+D+Y+KCGSL+ A + I D +++ +A++ Y MHGHG+ I
Sbjct: 455 SGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAIIAGYGMHGHGETAI 514
Query: 419 AHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLK--HYTCMVD 476
+ F +++ SG +P+ I+F S L AC HAG + G F M D + SL+ HYTC++D
Sbjct: 515 SLFDQMVQSGVKPNEITFTSILHACSHAGLVDEGLGLFKFM-LEDNQMSLRTDHYTCVID 573
Query: 477 LLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGN 536
LL RAG L EAYE I+ + P+ +WGALLG CV H N+E G++AA L ELEP NTGN
Sbjct: 574 LLGRAGRLEEAYELIRTMAFRPNHAVWGALLGSCVIHENVELGEVAAKWLFELEPGNTGN 633
Query: 537 YVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRD 578
YV+LAN+++ GRW D R M + + K+P S IE R+
Sbjct: 634 YVLLANIYSAVGRWRDAEHVRLMMNNIGLRKTPAHSLIEVRN 675
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/460 (23%), Positives = 200/460 (43%), Gaps = 35/460 (7%)
Query: 99 SVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIK 158
S+L C + + K+ H + G +S+P+ +LS+L
Sbjct: 23 SLLQRCTSRKSIPNTKQIHAHTITLGLLSSPY-----------SHHLLSSLA-------- 63
Query: 159 NEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMF 218
Y G AR+LFD++ + + SWN+MI Y ++ L +A +F
Sbjct: 64 ---------AAYAMFGCAPHARKLFDELRN----PSLFSWNAMIRMYTNSGLSYDALGLF 110
Query: 219 RDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCR 278
+L P ++T+ V+ AC D G IHA + G SD FV +L+ MY
Sbjct: 111 VQMLASGRRWPDNYTYPFVIKACGDYLLPEMGALIHARTVMSGFDSDAFVQNSLMAMYMN 170
Query: 279 YQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGII 338
++ A+ FD + + +G+ N A+ +F M+ + PD TV +
Sbjct: 171 CGEMEVARRVFDLMRERTLVSWNTMINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSV 230
Query: 339 LSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDL 398
L CS L +E G++VHA D+ + +L+DMYAKCG++ A++ + + D+
Sbjct: 231 LPVCSYLKELEVGRRVHALVEVKNLGEDISVWNSLLDMYAKCGNMDEAQMIFYEMDKRDV 290
Query: 399 VSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDL 458
VS M+ Y ++G + + + + +P+ ++ S LSAC S+K G
Sbjct: 291 VSWTTMMNGYILNGDARSALLLCQMMQFESVKPNFVTLASVLSACASLYSLKHGRCLHGW 350
Query: 459 MAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEF 518
++ + T ++D+ ++ + ++ K + W A++ GC+ H L
Sbjct: 351 AIRQKLESEVIVETALIDMYAKCNNVNLSFRVFSKTS-KQRTAPWNAIISGCI-HNGLSR 408
Query: 519 GQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQ 558
I + + +E + + + + L AYA +DL + R
Sbjct: 409 KAIELFKQMLMEAVDPNDATLNSLLPAYAFL-TDLQQARN 447
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 135/304 (44%), Gaps = 41/304 (13%)
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALGLQSDTF---VGGALVEMYCRYQDLVAAQMAFD 290
+ S+L C S+ K+IHA I LGL S + + +L Y + A+ FD
Sbjct: 21 YQSLLQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLLSSLAAAYAMFGCAPHARKLFD 80
Query: 291 EIENIENLLGKMKEDGFEPNVYTWNAM--------------QLFSEML-SLDLTPDIYTV 335
E+ N P++++WNAM LF +ML S PD YT
Sbjct: 81 ELRN--------------PSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTY 126
Query: 336 GIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST 395
++ AC E G +HA + G+DSD + +L+ MY CG ++ AR + +
Sbjct: 127 PFVIKACGDYLLPEMGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRE 186
Query: 396 PDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEF 455
LVS N M+ Y +G KE + F ++ G PD + +S L C + ++ G
Sbjct: 187 RTLVSWNTMINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRV 246
Query: 456 FDLMAYYDVKPSLKHYTCMVDLLSRAGELGEA----YEFIKKIPMAPDSVMWGALLGGCV 511
L+ ++ + + ++D+ ++ G + EA YE K+ D V W ++ G +
Sbjct: 247 HALVEVKNLGEDISVWNSLLDMYAKCGNMDEAQMIFYEMDKR-----DVVSWTTMMNGYI 301
Query: 512 SHGN 515
+G+
Sbjct: 302 LNGD 305
>gi|449451892|ref|XP_004143694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Cucumis sativus]
Length = 673
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 191/573 (33%), Positives = 302/573 (52%), Gaps = 43/573 (7%)
Query: 30 VTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEG 89
+ AC G V A + +S P+++ W+A+I G+TQ + I M MQ
Sbjct: 41 INACLHFGDVNYAHKAFREVSE-----PDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQ 95
Query: 90 LEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSAL 149
+ PN T VL AC +GK+ HG + GF SN FV N LV +Y
Sbjct: 96 VHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMY---------- 145
Query: 150 KIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNS 209
+KF G ++ AR +FD++ R ++SW S+ISGYV N
Sbjct: 146 ---AKF------------------GQISYARIVFDKLH----DRTVVSWTSIISGYVQNG 180
Query: 210 LYDEAFSMFRDLLMRD-GIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFV 268
EA ++F++ MR ++P SV+ A ++ L +GK IH L LGL+ + +
Sbjct: 181 DPMEALNVFKE--MRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDI 238
Query: 269 GGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDL 328
+L MY + + A+ F+ +E +L G+ N Y A++LF EM++ ++
Sbjct: 239 VISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNI 298
Query: 329 TPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARL 388
D T+ + A + + ++E + + Y + Y D + T L+DMYAKCGS+ AR
Sbjct: 299 RVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARC 358
Query: 389 AYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGS 448
+ R++ D+V + M+ Y +HGHG+E I + + +G P+ +F+ L+AC ++G
Sbjct: 359 VFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGL 418
Query: 449 IKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLG 508
+K G E F LM + ++P +HY+C+VDLL RAG L +AY+FI +P+ P +WGALL
Sbjct: 419 VKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLS 478
Query: 509 GCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKS 568
C H + G+IAA++L L+P NTG+YV L+NL+A A W+ +A R M + ++K
Sbjct: 479 ACKIHRKVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWTRVANVRLMMTQKGLNKD 538
Query: 569 PGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
G S IE + F+ DRSH +S+EI+ +D
Sbjct: 539 LGHSSIEINGNLETFQVGDRSHPKSKEIFEELD 571
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 111/202 (54%), Gaps = 6/202 (2%)
Query: 28 SVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQA 87
S+ T A GLV A RM E PNL+ W+A+I G+ NGY EEAI + M
Sbjct: 241 SLTTMYAKRGLVEVARFFFNRM-----EKPNLILWNAMISGYANNGYGEEAIKLFREMIT 295
Query: 88 EGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLS 147
+ + ++ T+ S + A A++ L L + GYI+++ + + FV GL+D+Y +CG +
Sbjct: 296 KNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYL 355
Query: 148 ALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVD 207
A +F + + K+ V + +I+GY +G+ EA L+++M+ GV ++ +++ +
Sbjct: 356 ARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKN 415
Query: 208 NSLYDEAFSMFRDLLMRDGIEP 229
+ L E + +F L+ GIEP
Sbjct: 416 SGLVKEGWELFH-LMPDHGIEP 436
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 100/424 (23%), Positives = 178/424 (41%), Gaps = 49/424 (11%)
Query: 27 NSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQ 86
NS+V+ A G + A +++ +VSW+++I G+ QNG EA+ + M+
Sbjct: 139 NSLVSMYAKFGQISYARIVFDKL-----HDRTVVSWTSIISGYVQNGDPMEALNVFKEMR 193
Query: 87 AEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDML 146
++P+ L SV+ A ++ L GK HG +T+ G P +V L +Y + G +
Sbjct: 194 QCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVE 253
Query: 147 SALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYV 206
A F++ N + N +I GY NG EA +LF +M
Sbjct: 254 VARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREM-------------------- 293
Query: 207 DNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDT 266
+ I S T S ++A A + SL + + + DT
Sbjct: 294 ----------------ITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDT 337
Query: 267 FVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSL 326
FV L++MY + + A+ FD + + + +L + G+ + + A+ L++EM
Sbjct: 338 FVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQA 397
Query: 327 DLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHA 386
+ P+ T +L+AC + ++ G ++ G + + +VD+ + G L
Sbjct: 398 GVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQ- 456
Query: 387 RLAYKRIST----PDLVSQNAMLTAYAMHGHGKEG-IAHFRRILASGFRPDHISFLSALS 441
AY I + P + A+L+A +H + G IA + + + H LS L
Sbjct: 457 --AYDFIMSMPIKPGVSVWGALLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQLSNLY 514
Query: 442 ACVH 445
A H
Sbjct: 515 ASAH 518
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/325 (20%), Positives = 143/325 (44%), Gaps = 13/325 (4%)
Query: 247 LRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDG 306
L+ +++ I GL F+ + + D+ A AF E+ + LL G
Sbjct: 15 LKHLDQVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKG 74
Query: 307 FEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSD 366
+ ++++ +M + P+ +T +L AC + GKQ+H + G+ S+
Sbjct: 75 YTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSN 134
Query: 367 VHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILA 426
V + +LV MYAK G + +AR+ + ++ +VS ++++ Y +G E + F+ +
Sbjct: 135 VFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQ 194
Query: 427 SGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGE 486
+PD I+ +S ++A + + G L+ ++ + + ++ G +
Sbjct: 195 CNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEV 254
Query: 487 AYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNN--TGNYVMLANLF 544
A F ++ P+ ++W A++ G ++G +G+ A E+ N + M + +
Sbjct: 255 ARFFFNRME-KPNLILWNAMISGYANNG---YGEEAIKLFREMITKNIRVDSITMRSAVL 310
Query: 545 AYA-------GRWSDLARTRQKMKD 562
A A RW D ++ + +D
Sbjct: 311 ASAQVGSLELARWLDGYISKSEYRD 335
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 77/183 (42%), Gaps = 14/183 (7%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGS+ A+ VF + ++D V W+ ++ +G EA+ CL PN
Sbjct: 346 MYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAI-CLYNEMKQAGVCPNDG 404
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
++ ++ +G +E + M G+EP+ + S V+ R L+ +F
Sbjct: 405 TFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYDF---- 460
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
MS P + V V+ G +LSA KI K + + I+ G+ +
Sbjct: 461 ----IMSMP--IKPGVSVW---GALLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQLS 511
Query: 181 ELF 183
L+
Sbjct: 512 NLY 514
>gi|357111956|ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Brachypodium distachyon]
Length = 747
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 194/575 (33%), Positives = 302/575 (52%), Gaps = 48/575 (8%)
Query: 28 SVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQA 87
S+V A G + EA + + MS D + +W+A++ G +N EA+G+ RM
Sbjct: 108 SLVHAYLRFGRISEAYKVFDEMSERD-----VPAWNAMLSGLCRNARAAEAVGLFGRMVG 162
Query: 88 EGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLS 147
EG+ + T+SSVLP C L L H Y ++G FV N L+DVY + G ML
Sbjct: 163 EGVAGDTVTVSSVLPMCVLLGDQVLALVMHVYAVKHGLDKELFVCNALIDVYGKLG-MLE 221
Query: 148 ALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVD 207
EA+ +F ME R +++WNS+ISG
Sbjct: 222 ------------------------------EAQCVFHGME----CRDLVTWNSIISGCEQ 247
Query: 208 NSLYDEAFSMFRDLLMR-DGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDT 266
A MF+ MR G+ P T S+ A A R K +H + G D
Sbjct: 248 RGQTAAALKMFQG--MRGSGVSPDVLTLVSLASAIAQGGDGRSAKSLHCYVMRRGWDVDD 305
Query: 267 FVGG-ALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLS 325
+ G A+V+MY + ++ AAQ FD + +++ G+ N A++ + M
Sbjct: 306 IIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLITGYMQNGLANEAVERYGHMQK 365
Query: 326 LDLTPDIY-TVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLK 384
+ I T +L A S L +++G ++HA +I+ G + DV++GT L+D+YAKCG L
Sbjct: 366 HEGLKAIQGTFVSVLPAYSHLGALQQGMRMHALSIKIGLNVDVYVGTCLIDLYAKCGKLA 425
Query: 385 HARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACV 444
A L ++++ NA+++ +HGHG E + F R+ G +PDH++F+S L+AC
Sbjct: 426 EAMLLFEKMPRRSTGPWNAIISGLGVHGHGAEALTLFSRMQQEGIKPDHVTFVSLLAACS 485
Query: 445 HAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMW 503
HAG + G FFD+M YD+ P KHY CM D+L RAG+L EA+ FI+ +P+ PDS +W
Sbjct: 486 HAGLVDQGRSFFDVMQVTYDIVPIAKHYACMADMLGRAGQLDEAFNFIQNMPIKPDSAVW 545
Query: 504 GALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDR 563
GALLG C HGN+E G++A+ L EL+P N G YV+++N++A G+W + R ++ +
Sbjct: 546 GALLGACRIHGNVEMGKVASQNLFELDPENVGYYVLMSNMYAKVGKWDGVDEVRSLVRRQ 605
Query: 564 RMHKSPGCSWIEDRDEIHKFRASDRS--HDRSEEI 596
+ K+PG S IE + ++ F + +++ H + EEI
Sbjct: 606 NLQKTPGWSSIEVKRSVNVFYSGNQTEPHPQHEEI 640
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 106/422 (25%), Positives = 179/422 (42%), Gaps = 78/422 (18%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+YGK G L++A+ VF M RD V+WNS+++ C G AL+
Sbjct: 213 VYGKLGMLEEAQCVFHGMECRDLVTWNSIISGCEQRGQTAAALK---------------- 256
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
M M+ G+ P+ TL S+ A A+ K H Y+
Sbjct: 257 --------------------MFQGMRGSGVSPDVLTLVSLASAIAQGGDGRSAKSLHCYV 296
Query: 121 TRNGFMSNPFVV-NGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
R G+ + + N +VD+Y + ++ +A ++F +++ VS NT+I GY +NG EA
Sbjct: 297 MRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLITGYMQNGLANEA 356
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
E + M+ +G++ TF SVL
Sbjct: 357 VERYGHMQK-----------------------------------HEGLKAIQGTFVSVLP 381
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
A + + +L++G +HAL+I +GL D +VG L+++Y + L A + F+++
Sbjct: 382 AYSHLGALQQGMRMHALSIKIGLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGP 441
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
G + + A+ LFS M + PD T +L+ACS +++G+ +
Sbjct: 442 WNAIISGLGVHGHGAEALTLFSRMQQEGIKPDHVTFVSLLAACSHAGLVDQGRSFFD-VM 500
Query: 360 RCGYDSDVHIG---TALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNAMLTAYAMHGHGK 415
+ YD V I + DM + G L A + + PD A+L A +HG+ +
Sbjct: 501 QVTYDI-VPIAKHYACMADMLGRAGQLDEAFNFIQNMPIKPDSAVWGALLGACRIHGNVE 559
Query: 416 EG 417
G
Sbjct: 560 MG 561
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 118/283 (41%), Gaps = 67/283 (23%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K +++ A+++F MP +D VSWN+++T NGL EA+E M
Sbjct: 315 MYAKLSNIEAAQRMFDSMPVQDSVSWNTLITGYMQNGLANEAVERYGHMQ---------- 364
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+ EGL+ T SVLPA + L L G H
Sbjct: 365 -------------------------KHEGLKAIQGTFVSVLPAYSHLGALQQGMRMHALS 399
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G + +V L+D+Y +CG + A+ +F K ++ N II G +G+ AEA
Sbjct: 400 IKIGLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAIISGLGVHGHGAEAL 459
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMF-------------------RDL 221
LF +M+ G++ +++ S+++ L D+ S F D+
Sbjct: 460 TLFSRMQQEGIKPDHVTFVSLLAACSHAGLVDQGRSFFDVMQVTYDIVPIAKHYACMADM 519
Query: 222 LMRDG-------------IEPTSFTFGSVLIACADMNSLRKGK 251
L R G I+P S +G++L AC ++ GK
Sbjct: 520 LGRAGQLDEAFNFIQNMPIKPDSAVWGALLGACRIHGNVEMGK 562
>gi|224129792|ref|XP_002320672.1| predicted protein [Populus trichocarpa]
gi|222861445|gb|EEE98987.1| predicted protein [Populus trichocarpa]
Length = 720
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 196/606 (32%), Positives = 320/606 (52%), Gaps = 47/606 (7%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KC L A F E + S+N+++ A A L+ A +++ P+LV
Sbjct: 52 LYSKCNLLTTAHHAFNQTHEPNVFSFNALIAAYAKESLIHVAHHLFDQIPQ-----PDLV 106
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
S++ +I + G A+ + M+ GL + T S V+ AC + L ++ H
Sbjct: 107 SFNTLINAYADRGDTLSALSLFGEMREMGLVMDGFTFSGVITACC--NHVGLIRQLHSLA 164
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+GF D Y S+KN +++ Y +NG + EA
Sbjct: 165 FSSGF-----------DSY---------------VSVKN-----SLLTYYSKNGILEEAE 193
Query: 181 ELFDQM-EHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
+F+ M E + R +SWNSMI Y + +A +++RD++ R G E FT SVL
Sbjct: 194 MVFNGMGEEV---RDEVSWNSMIVAYGQHKRGLKALALYRDMVHR-GFEIDMFTLASVLT 249
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRY-QDLVAAQMAFDEIENIENL 298
+ + L G + HA AI G + VG L++MY + + ++ F+EI + +
Sbjct: 250 TFSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEICGSDLV 309
Query: 299 LGKMKEDGFEPNV-YTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAY 357
+ G+ N + A++ F +M PD + +SACS+L++ +GKQ HA
Sbjct: 310 VWNTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSSPSQGKQFHAL 369
Query: 358 AIRCGYDSD-VHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKE 416
A++ S+ + + ALV MY+KCG+L+ AR ++R+ + V+ N+++ YA HG G E
Sbjct: 370 AMKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMPQHNTVTLNSIIAGYAQHGIGTE 429
Query: 417 GIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMV 475
+ F ++LA+ P I+ +S LSAC H G ++ G ++F++M + ++P +HY+CM+
Sbjct: 430 SLNLFEQMLAASIAPTSITLVSILSACAHTGRVEEGKKYFNMMKDIFGIEPEAEHYSCMI 489
Query: 476 DLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTG 535
DLL RAG+L EA I +P +P S W ALLG C +GN+E + AA++ ++LEP N
Sbjct: 490 DLLGRAGKLSEAERLIDTMPFSPGSAAWAALLGACRKYGNMELAEKAANQFLQLEPTNAV 549
Query: 536 NYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEE 595
Y+MLA++++ A +W + AR R+ M+DR + K PGCSWIE +H F A D SH R +E
Sbjct: 550 PYIMLASMYSAARKWEEAARIRKLMRDRGIRKKPGCSWIELNKRVHVFVAEDNSHPRIKE 609
Query: 596 IYTIID 601
I+ +D
Sbjct: 610 IHMYLD 615
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 118/439 (26%), Positives = 215/439 (48%), Gaps = 41/439 (9%)
Query: 95 RTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSK 154
++ +L +C + L GK H ++ S+ ++ N + +Y +C + +A F++
Sbjct: 9 QSFRQILKSCIANKDLLTGKSLHTIYLKSLIPSSTYLSNHFILLYSKCNLLTTAHHAFNQ 68
Query: 155 FSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEA 214
N S N +I Y + + A LFDQ+ Q ++S+N++I+ Y D A
Sbjct: 69 THEPNVFSFNALIAAYAKESLIHVAHHLFDQIP----QPDLVSFNTLINAYADRGDTLSA 124
Query: 215 FSMFRDLLMRD-GIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALV 273
S+F + MR+ G+ FTF V+ AC + L +++H+LA + G S V +L+
Sbjct: 125 LSLFGE--MREMGLVMDGFTFSGVITACCNHVGLI--RQLHSLAFSSGFDSYVSVKNSLL 180
Query: 274 EMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAM--------------QL 319
Y + L A+M F N +G+ D +WN+M L
Sbjct: 181 TYYSKNGILEEAEMVF-------NGMGEEVRDEV-----SWNSMIVAYGQHKRGLKALAL 228
Query: 320 FSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAK 379
+ +M+ D++T+ +L+ S + + G Q HA AI+ G++ + H+G+ L+DMYAK
Sbjct: 229 YRDMVHRGFEIDMFTLASVLTTFSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAK 288
Query: 380 CGS-LKHARLAYKRISTPDLVSQNAMLTAYAMHGH-GKEGIAHFRRILASGFRPDHISFL 437
CG+ + +R ++ I DLV N M++ Y+ + E + FR++ +G+ PD SF+
Sbjct: 289 CGAGMSESRKVFEEICGSDLVVWNTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFV 348
Query: 438 SALSACVHAGSIKTGSEFFDLMAYYDVKPS--LKHYTCMVDLLSRAGELGEAYEFIKKIP 495
A+SAC + S G +F L ++ PS + +V + S+ G L +A + +++P
Sbjct: 349 CAISACSNLSSPSQGKQFHALAMKSEI-PSNQISVNNALVTMYSKCGNLQDARKLFQRMP 407
Query: 496 MAPDSVMWGALLGGCVSHG 514
++V +++ G HG
Sbjct: 408 QH-NTVTLNSIIAGYAQHG 425
>gi|218195439|gb|EEC77866.1| hypothetical protein OsI_17132 [Oryza sativa Indica Group]
Length = 865
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 192/635 (30%), Positives = 329/635 (51%), Gaps = 76/635 (11%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
M+ +CG +D A ++F + NS++ A + A+E E M+ D +V
Sbjct: 182 MFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERD-----VV 236
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ +I +Q+G EA+G++ M +G+ ++ T +S L ACARL L GK+ H +
Sbjct: 237 SWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKV 296
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R+ +P+V + L+++Y +CG A ++F+ +N VS +I G + +++
Sbjct: 297 IRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSV 356
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
ELF+QM +L+ D F +++
Sbjct: 357 ELFNQMR-------------------------------AELMAID-----QFALATLISG 380
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI-------- 292
C + L G+++H+L + G V +L+ +Y + DL A+ F +
Sbjct: 381 CFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSW 440
Query: 293 -------ENIENLLGKMKE--DGFEP-NVYTWNAM--------------QLFSEMLSL-D 327
I N++ K +E DG + N TWNAM +++S MLS D
Sbjct: 441 TSMITAYSQIGNII-KAREFFDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKD 499
Query: 328 LTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHAR 387
+TPD T + C+ + + G Q+ + ++ G +V + A + MY+KCG + A+
Sbjct: 500 VTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQ 559
Query: 388 LAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAG 447
+ ++ D+VS NAM+T Y+ HG GK+ F +L+ G +PD+IS+++ LS C H+G
Sbjct: 560 KLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSG 619
Query: 448 SIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGAL 506
++ G +FD+M + + P L+H++CMVDLL RAG L EA + I K+PM P + +WGAL
Sbjct: 620 LVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGAL 679
Query: 507 LGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMH 566
L C HGN E ++AA + EL+ ++G+Y++LA +++ AG+ D A+ R+ M+D+ +
Sbjct: 680 LSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIK 739
Query: 567 KSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
K+PG SW+E +++H F+A D SH + I +D
Sbjct: 740 KNPGYSWMEVENKVHVFKADDVSHPQVIAIRNKLD 774
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 134/553 (24%), Positives = 252/553 (45%), Gaps = 57/553 (10%)
Query: 2 YGKCGSLDDAKKVFKM-MPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
Y CG+L DA+++ + + E + ++ N ++ A G + +A E +RM D +
Sbjct: 49 YFSCGALSDARRLLRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRD-----VA 103
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLE-PNARTLSSVLPACARLQKLSLGKEFHGY 119
SW+ ++ G+ Q + + M G PNA T V+ +C L L + G
Sbjct: 104 SWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGL 163
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ F +P V LVD++ RCG + A ++FS+ N+++ GY + + A
Sbjct: 164 FWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHA 223
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
E F+ M +R ++SWN MI+ + EA + + + R G+ S T+ S L
Sbjct: 224 IEYFEDM----AERDVVSWNMMIAALSQSGRVREALGLVVE-MHRKGVRLDSTTYTSSLT 278
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
ACA + SL GK++HA I Q D +V AL+E+Y + A+ F+ +++ ++
Sbjct: 279 ACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVS 338
Query: 300 ------GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ 353
G ++ + F +V +LF++M + + D + + ++S C + + G+Q
Sbjct: 339 WTVLIGGSLQYECFSKSV------ELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQ 392
Query: 354 VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVS------------- 400
+H+ ++ G++ + + +L+ +YAKCG L++A + +S D+VS
Sbjct: 393 LHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGN 452
Query: 401 ------------------QNAMLTAYAMHGHGKEGIAHFRRILASG-FRPDHISFLSALS 441
NAML AY HG ++G+ + +L+ PD +++++
Sbjct: 453 IIKAREFFDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFR 512
Query: 442 ACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSV 501
C G+ K G + + ++ + + S+ G + EA + + D V
Sbjct: 513 GCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLN-GKDVV 571
Query: 502 MWGALLGGCVSHG 514
W A++ G HG
Sbjct: 572 SWNAMITGYSQHG 584
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 125/518 (24%), Positives = 218/518 (42%), Gaps = 79/518 (15%)
Query: 95 RTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSK 154
+ L+ L +C L+ + HG + G S F+ N L+ Y CG + A ++ +
Sbjct: 5 QALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLL-R 63
Query: 155 FSIK--NEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYD 212
IK N ++ N ++ GY + G++++A ELFD+M +R + SWN+++SGY +
Sbjct: 64 ADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMP----RRDVASWNTLMSGYFQARRFL 119
Query: 213 EAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGAL 272
+ F + P +FTF V+ +C + ++ L D V AL
Sbjct: 120 DGLETFVSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETAL 179
Query: 273 VEMYCRYQDLVAAQMAFDEIENI------ENLLGKMK-----------EDGFEPNVYTWN 315
V+M+ R + A F +IE L G K ED E +V +WN
Sbjct: 180 VDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWN 239
Query: 316 --------------AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRC 361
A+ L EM + D T L+AC+ L ++ GKQ+HA IR
Sbjct: 240 MMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRS 299
Query: 362 GYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHF 421
D ++ +AL+++YAKCGS K A+ + + + VS ++ + + + F
Sbjct: 300 LPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELF 359
Query: 422 RRILASGFRPDHISFLSALSAC-----------VHAGSIKTG------------------ 452
++ A D + + +S C +H+ +K+G
Sbjct: 360 NQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKC 419
Query: 453 -----SEF-FDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGAL 506
+EF F M+ D+ +T M+ S+ G + +A EF + +++ W A+
Sbjct: 420 GDLQNAEFVFSSMSERDIVS----WTSMITAYSQIGNIIKAREFFDGMD-TRNAITWNAM 474
Query: 507 LGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLF 544
LG + HG E G ++ + + T ++V LF
Sbjct: 475 LGAYIQHGAEEDGLKMYSAMLS-QKDVTPDWVTYVTLF 511
>gi|356540347|ref|XP_003538651.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
chloroplastic-like [Glycine max]
Length = 753
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 180/556 (32%), Positives = 294/556 (52%), Gaps = 65/556 (11%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
+L SW+ +I +T+ G +EA+G+ RM G+ PN S+++ + A L LGK+ H
Sbjct: 144 DLSSWATIISAYTEEGRIDEAVGLFLRMLDLGIIPNFSIFSTLIMSFADPSMLDLGKQIH 203
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
+ R F ++ + + ++Y +CG + A +K + K+ V+C ++VGY +
Sbjct: 204 SQLIRIEFAADISIETLISNMYVKCGWLDGAEVATNKMTRKSAVACTGLMVGYTQAARNR 263
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
+A LF +M + +G+E F F +
Sbjct: 264 DALLLFSKM------------------------------------ISEGVELDGFVFSII 287
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
L ACA + L GK+IH+ I LGL+S+ VG LV+ Y + AA+ AF+ I
Sbjct: 288 LKACAALGDLYTGKQIHSYCIKLGLESEVSVGTPLVDFYVKCARFEAARQAFESIH---- 343
Query: 298 LLGKMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACS 343
EPN ++W+A+ ++F + S + + + I ACS
Sbjct: 344 ----------EPNDFSWSALIAGYCQSGKFDRALEVFKTIRSKGVLLNSFIYNNIFQACS 393
Query: 344 SLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNA 403
+++ + G Q+HA AI+ G + + +A++ MY+KCG + +A A+ I PD V+ A
Sbjct: 394 AVSDLICGAQIHADAIKKGLVAYLSGESAMITMYSKCGKVDYAHQAFLAIDKPDTVAWTA 453
Query: 404 MLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YY 462
++ A+A HG E + F+ + SG RP+ ++F+ L+AC H+G +K G +F D M Y
Sbjct: 454 IICAHAYHGKASEALRLFKEMQGSGVRPNVVTFIGLLNACSHSGLVKEGKQFLDSMTDKY 513
Query: 463 DVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIA 522
V P++ HY CM+D+ SRAG L EA E I+ +P PD + W +LLGGC S NLE G IA
Sbjct: 514 GVNPTIDHYNCMIDIYSRAGLLLEALEVIRSMPFEPDVMSWKSLLGGCWSRRNLEIGMIA 573
Query: 523 ADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHK 582
AD + L+P ++ YV++ NL+A AG+W + A+ R+ M +R + K CSWI + ++H+
Sbjct: 574 ADNIFRLDPLDSATYVIMFNLYALAGKWDEAAQFRKMMAERNLRKEVSCSWIIVKGKVHR 633
Query: 583 FRASDRSHDRSEEIYT 598
F DR H ++E+IY+
Sbjct: 634 FVVGDRHHPQTEQIYS 649
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 124/442 (28%), Positives = 199/442 (45%), Gaps = 60/442 (13%)
Query: 85 MQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGD 144
M G+ N R+ + C L LS GK FH + R SN F+ N ++ +Y C
Sbjct: 71 MDIAGISINPRSYEYLFKMCGTLGALSDGKLFHNRLQRMA-NSNKFIDNCILQMYCDCKS 129
Query: 145 MLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISG 204
+A + F K ++ S TII Y E G + EA LF +M LG+
Sbjct: 130 FTAAERFFDKIVDRDLSSWATIISAYTEEGRIDEAVGLFLRMLDLGI------------- 176
Query: 205 YVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQS 264
+ N FS+F L+M SF AD + L GK+IH+ I + +
Sbjct: 177 -IPN------FSIFSTLIM-------SF---------ADPSMLDLGKQIHSQLIRIEFAA 213
Query: 265 DTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEML 324
D + + MY + L A++A +++ + G+ +A+ LFS+M+
Sbjct: 214 DISIETLISNMYVKCGWLDGAEVATNKMTRKSAVACTGLMVGYTQAARNRDALLLFSKMI 273
Query: 325 SLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLK 384
S + D + IIL AC++L + GKQ+H+Y I+ G +S+V +GT LVD Y KC +
Sbjct: 274 SEGVELDGFVFSIILKACAALGDLYTGKQIHSYCIKLGLESEVSVGTPLVDFYVKCARFE 333
Query: 385 HARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSAC- 443
AR A++ I P+ S +A++ Y G + F+ I + G + + + AC
Sbjct: 334 AARQAFESIHEPNDFSWSALIAGYCQSGKFDRALEVFKTIRSKGVLLNSFIYNNIFQACS 393
Query: 444 ----------VHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKK 493
+HA +IK G L+AY L + M+ + S+ G++ A++
Sbjct: 394 AVSDLICGAQIHADAIKKG-----LVAY------LSGESAMITMYSKCGKVDYAHQAFLA 442
Query: 494 IPMAPDSVMWGALLGGCVSHGN 515
I PD+V W A++ HG
Sbjct: 443 ID-KPDTVAWTAIICAHAYHGK 463
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 139/325 (42%), Gaps = 22/325 (6%)
Query: 227 IEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQ 286
I P S+ + + C + +L GK H + S+ F+ +++MYC + AA+
Sbjct: 78 INPRSYEY--LFKMCGTLGALSDGKLFHNRLQRMA-NSNKFIDNCILQMYCDCKSFTAAE 134
Query: 287 MAFDEIENIE-----NLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSA 341
FD+I + + ++ E+G A+ LF ML L + P+ ++ +
Sbjct: 135 RFFDKIVDRDLSSWATIISAYTEEG-----RIDEAVGLFLRMLDLGIIPNFSIFSTLIMS 189
Query: 342 CSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQ 401
+ + ++ GKQ+H+ IR + +D+ I T + +MY KCG L A +A +++ V+
Sbjct: 190 FADPSMLDLGKQIHSQLIRIEFAADISIETLISNMYVKCGWLDGAEVATNKMTRKSAVAC 249
Query: 402 NAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY 461
++ Y ++ + F ++++ G D F L AC G + TG +
Sbjct: 250 TGLMVGYTQAARNRDALLLFSKMISEGVELDGFVFSIILKACAALGDLYTGKQIHSYCIK 309
Query: 462 YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQI 521
++ + T +VD + A + + I P+ W AL+ G G
Sbjct: 310 LGLESEVSVGTPLVDFYVKCARFEAARQAFESIH-EPNDFSWSALIAGYCQSGKF----- 363
Query: 522 AADRLIELEPNNTGNYVMLANLFAY 546
DR +E+ V+L N F Y
Sbjct: 364 --DRALEVFKTIRSKGVLL-NSFIY 385
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 87/174 (50%)
Query: 57 PNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEF 116
PN SWSA+I G+ Q+G + A+ + ++++G+ N+ +++ AC+ + L G +
Sbjct: 345 PNDFSWSALIAGYCQSGKFDRALEVFKTIRSKGVLLNSFIYNNIFQACSAVSDLICGAQI 404
Query: 117 HGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNV 176
H + G ++ + ++ +Y +CG + A + F + V+ II + +G
Sbjct: 405 HADAIKKGLVAYLSGESAMITMYSKCGKVDYAHQAFLAIDKPDTVAWTAIICAHAYHGKA 464
Query: 177 AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPT 230
+EA LF +M+ GV+ ++++ +++ + L E + + G+ PT
Sbjct: 465 SEALRLFKEMQGSGVRPNVVTFIGLLNACSHSGLVKEGKQFLDSMTDKYGVNPT 518
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 61/119 (51%), Gaps = 3/119 (2%)
Query: 55 ETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGK 114
+ P+ V+W+A+I +G EA+ + MQ G+ PN T +L AC+ + GK
Sbjct: 444 DKPDTVAWTAIICAHAYHGKASEALRLFKEMQGSGVRPNVVTFIGLLNACSHSGLVKEGK 503
Query: 115 EFHGYITRNGFMSNPFV--VNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYC 171
+F +T + + NP + N ++D+Y R G +L AL++ + +V ++G C
Sbjct: 504 QFLDSMT-DKYGVNPTIDHYNCMIDIYSRAGLLLEALEVIRSMPFEPDVMSWKSLLGGC 561
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 88/207 (42%), Gaps = 44/207 (21%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVV------------------------------ 30
MY KCG +D A + F + + D V+W +++
Sbjct: 426 MYSKCGKVDYAHQAFLAIDKPDTVAWTAIICAHAYHGKASEALRLFKEMQGSGVRPNVVT 485
Query: 31 -----TACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRM 85
AC+ +GLV E + L+ M+ P + ++ +I +++ G EA+ ++ M
Sbjct: 486 FIGLLNACSHSGLVKEGKQFLDSMTDKYGVNPTIDHYNCMIDIYSRAGLLLEALEVIRSM 545
Query: 86 QAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITR-NGFMSNPFVVNGLVDVYRRCGD 144
EP+ + S+L C + L +G I R + S +V+ + ++Y G
Sbjct: 546 P---FEPDVMSWKSLLGGCWSRRNLEIGMIAADNIFRLDPLDSATYVI--MFNLYALAGK 600
Query: 145 MLSAL---KIFSKFSIKNEVSCNTIIV 168
A K+ ++ +++ EVSC+ IIV
Sbjct: 601 WDEAAQFRKMMAERNLRKEVSCSWIIV 627
>gi|357146631|ref|XP_003574060.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Brachypodium distachyon]
Length = 735
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 206/641 (32%), Positives = 310/641 (48%), Gaps = 84/641 (13%)
Query: 22 DCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGM 81
D +SWN++V+ A NG + AL + M L P + SW+ +I G QN +EA+G
Sbjct: 9 DVISWNTLVSGFARNGDLGAALHLFDEMR-LRGVKPRVSSWNCIISGCVQNSRYDEALG- 66
Query: 82 LFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRR 141
+F+ E P+A T++S+LPAC L L +GK+ H Y+ R G N ++ + L+ +Y
Sbjct: 67 IFQEMCETEMPDAVTVASILPACTGLMALGIGKQLHSYVVRCGIKLNVYIGSSLIGMYSE 126
Query: 142 CGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSM 201
C A +FS +N N +I Y +G + +A E F+ M+ G++ I+++NS
Sbjct: 127 CRQFAYARSVFSAIDERNVTVWNELIQSYINDGRMDKAWEAFNLMQEDGLEPDIVTYNSF 186
Query: 202 ISGYVDNS-----------------------------------LYDEAFSMFRDLLMRD- 225
ISGY L +A FR + + +
Sbjct: 187 ISGYARTGQKELAYELLSGMANFSLKPTVISMNALISGLHHYGLCADALEAFRYMQLPNR 246
Query: 226 ------------GIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALV 273
I+P T SVL D+ R GKE+H A+ GL S+ FV LV
Sbjct: 247 EAKHWSFHDNNSPIQPNGTTITSVLSLLTDLKLHRFGKEVHCYALRNGLTSNIFVSSKLV 306
Query: 274 EMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWN--------------AMQL 319
++Y + D+V+A F I N NV TWN A++L
Sbjct: 307 DLYGKTGDMVSAANFFQGIRN--------------KNVVTWNSLLAAYKHNRKPEVALKL 352
Query: 320 FSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRC---GYDSDVHIGTALVDM 376
F EML DL P++ T+ I+L + + G+++H Y + GY + TAL+DM
Sbjct: 353 FYEMLKSDLLPNLVTMHIVLLSSGMTMALRYGRELHGYINKNWFGGYPDT--LATALIDM 410
Query: 377 YAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISF 436
Y KCG + ARL ++ D+ NAM++ Y +H ++ F+ I S +PDH++F
Sbjct: 411 YGKCGKIDDARLVFECTVEKDIAVWNAMMSCYLLHRMPRDVKRLFKYIEHSRIQPDHVTF 470
Query: 437 LSALSACVHAGSIKTG-SEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIP 495
+ LSAC GS++ S + + Y +KP+LKHYTCMVD++ AG L E+ E I+K+P
Sbjct: 471 VILLSACKQEGSMEEARSYLYSMEDLYCIKPTLKHYTCMVDIMGTAGLLEESLELIQKMP 530
Query: 496 MAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLAR 555
+ PD+ +W +L C H NLE AA L ELEPNNT NY+ L+N++A G W
Sbjct: 531 LEPDACLWSTVLKACKLHSNLEVADKAAKALFELEPNNTSNYMALSNIYANNGLWDFTDS 590
Query: 556 TRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEI 596
R M ++ +H CS + + F A SH E I
Sbjct: 591 VRDAMTEQGLHVERQCSLLYLGTNVDSFEAGVMSHPAFENI 631
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 116/482 (24%), Positives = 186/482 (38%), Gaps = 123/482 (25%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +C A+ VF + ER+ WN ++ + +G + +A E M D P++V
Sbjct: 123 MYSECRQFAYARSVFSAIDERNVTVWNELIQSYINDGRMDKAWEAFNLMQE-DGLEPDIV 181
Query: 61 SWSAVIGGFTQNGYDEEAIGML------------------------FRMQAEGLE----- 91
++++ I G+ + G E A +L + + A+ LE
Sbjct: 182 TYNSFISGYARTGQKELAYELLSGMANFSLKPTVISMNALISGLHHYGLCADALEAFRYM 241
Query: 92 --------------------PNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFV 131
PN T++SVL L+ GKE H Y RNG SN FV
Sbjct: 242 QLPNREAKHWSFHDNNSPIQPNGTTITSVLSLLTDLKLHRFGKEVHCYALRNGLTSNIFV 301
Query: 132 VNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGV 191
+ LVD+Y + GDM+SA F KN V+ N+++ Y N A +LF +M
Sbjct: 302 SSKLVDLYGKTGDMVSAANFFQGIRNKNVVTWNSLLAAYKHNRKPEVALKLFYEM----- 356
Query: 192 QRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGK 251
++ + P T VL++ +LR G+
Sbjct: 357 -------------------------------LKSDLLPNLVTMHIVLLSSGMTMALRYGR 385
Query: 252 EIHALAIA--LGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEP 309
E+H G DT + AL++MY + + A++ F E E
Sbjct: 386 ELHGYINKNWFGGYPDT-LATALIDMYGKCGKIDDARLVF--------------ECTVEK 430
Query: 310 NVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVH 355
++ WNAM +LF + + PD T I+LSAC +ME + +
Sbjct: 431 DIAVWNAMMSCYLLHRMPRDVKRLFKYIEHSRIQPDHVTFVILLSACKQEGSMEEARS-Y 489
Query: 356 AYAIR---CGYDSDVHIGTALVDMYAKCGSLKHA-RLAYKRISTPDLVSQNAMLTAYAMH 411
Y++ C + H T +VD+ G L+ + L K PD + +L A +H
Sbjct: 490 LYSMEDLYCIKPTLKHY-TCMVDIMGTAGLLEESLELIQKMPLEPDACLWSTVLKACKLH 548
Query: 412 GH 413
+
Sbjct: 549 SN 550
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 42/97 (43%), Gaps = 2/97 (2%)
Query: 426 ASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELG 485
ASG RPD IS+ + +S G + FD M VKP + + C++ +
Sbjct: 3 ASGVRPDVISWNTLVSGFARNGDLGAALHLFDEMRLRGVKPRVSSWNCIISGCVQNSRYD 62
Query: 486 EAYEFIKKI--PMAPDSVMWGALLGGCVSHGNLEFGQ 520
EA +++ PD+V ++L C L G+
Sbjct: 63 EALGIFQEMCETEMPDAVTVASILPACTGLMALGIGK 99
>gi|357118938|ref|XP_003561204.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Brachypodium distachyon]
Length = 618
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 191/598 (31%), Positives = 316/598 (52%), Gaps = 59/598 (9%)
Query: 5 CGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSA 64
G + DA+++F P+RD VSW ++V A A G++ +A +R + N+V+W+A
Sbjct: 48 AGRVSDARRLFDRTPDRDVVSWTALVAAYACQGMLHDARALFDR----PDARRNVVTWTA 103
Query: 65 VIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLG-KEFHGYITRN 123
++ G+ + G +EA + RM E N + +++L A ++ F+G R+
Sbjct: 104 LLSGYARAGRVDEAEALFGRMP----ERNVVSWNTMLEAYTSSGRVGDACTLFNGMPVRD 159
Query: 124 GFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELF 183
N ++ LV R G++ A K+F + +N ++ T++ G +G+V EAR LF
Sbjct: 160 AGSWN-ILLAALV----RSGNIDKARKLFDRMPERNVMAWTTMVAGIARSGSVNEARALF 214
Query: 184 DQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACAD 243
D M +R ++SWN+MISGY N + DEA +F + RD IA +
Sbjct: 215 DGMP----ERNVVSWNAMISGYARNHMIDEAHDLFMKMPTRD-------------IASWN 257
Query: 244 MNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMK 303
+ ++ + + ++L AQ FD++ +
Sbjct: 258 I---------------------------MITGFIQNKNLERAQELFDKMPRRNVVTWTTM 290
Query: 304 EDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGY 363
+G+ ++ + A+QLF+ ML + P+ T + ACS+LA + G+QVH + +
Sbjct: 291 MNGYLQSIQSETALQLFNGMLIDGIRPNQVTFLGAVDACSNLAGLSEGQQVHQMICKTPF 350
Query: 364 DSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRR 423
D I + L+++YAKCG + AR + D++S N M+ AYA HG G E I + +
Sbjct: 351 QFDTFIESTLMNLYAKCGEIILARKVFNLSKEKDVISWNGMIAAYAHHGVGLEAIHLYEK 410
Query: 424 ILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAG 482
+ +G++P+ ++++ LSAC H+G + G F+ M + +HYTC++DL SRAG
Sbjct: 411 MQENGYKPNDVTYVGLLSACSHSGLVDEGLRIFEYMVKDRSIAVRDEHYTCLIDLCSRAG 470
Query: 483 ELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLAN 542
LG+A I + + P S +W ALLGGC SHGN G +AA L+E EPNN G Y +L N
Sbjct: 471 RLGDAKRLIHFLKVEPSSTVWNALLGGCNSHGNESIGDLAARNLLEAEPNNAGTYTLLCN 530
Query: 543 LFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTII 600
++A AG+W + A+ R +M DR + K PGCSWIE +++H F + D+SH S+ I +++
Sbjct: 531 IYASAGKWKEAAKIRSEMNDRGLKKQPGCSWIEVANKVHVFVSRDKSHSESDLINSLL 588
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 118/444 (26%), Positives = 207/444 (46%), Gaps = 56/444 (12%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y + G +D+A+ +F MPER+ VSWN+++ A ++G V +A M D S
Sbjct: 108 YARAGRVDEAEALFGRMPERNVVSWNTMLEAYTSSGRVGDACTLFNGMPVRDAG-----S 162
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKE-FHGYI 120
W+ ++ ++G ++A + RM E N ++++ AR ++ + F G
Sbjct: 163 WNILLAALVRSGNIDKARKLFDRMP----ERNVMAWTTMVAGIARSGSVNEARALFDGMP 218
Query: 121 TRNGFMSNPFVV--NGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
RN VV N ++ Y R + A +F K ++ S N +I G+ +N N+
Sbjct: 219 ERN-------VVSWNAMISGYARNHMIDEAHDLFMKMPTRDIASWNIMITGFIQNKNLER 271
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
A+ELFD+M +R +++W +M++GY+ + + A +F +L+ DGI P TF +
Sbjct: 272 AQELFDKMP----RRNVVTWTTMMNGYLQSIQSETALQLFNGMLI-DGIRPNQVTFLGAV 326
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
AC+++ L +G+++H + Q DTF+ L+ +Y + +++ A+ F+
Sbjct: 327 DACSNLAGLSEGQQVHQMICKTPFQFDTFIESTLMNLYAKCGEIILARKVFN-------- 378
Query: 299 LGKMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSS 344
L K E +V +WN M L+ +M P+ T +LSACS
Sbjct: 379 LSK------EKDVISWNGMIAAYAHHGVGLEAIHLYEKMQENGYKPNDVTYVGLLSACSH 432
Query: 345 LATMERGKQVHAYAI--RCGYDSDVHIGTALVDMYAKCGSLKHA-RLAYKRISTPDLVSQ 401
++ G ++ Y + R D H T L+D+ ++ G L A RL + P
Sbjct: 433 SGLVDEGLRIFEYMVKDRSIAVRDEHY-TCLIDLCSRAGRLGDAKRLIHFLKVEPSSTVW 491
Query: 402 NAMLTAYAMHGHGKEGIAHFRRIL 425
NA+L HG+ G R +L
Sbjct: 492 NALLGGCNSHGNESIGDLAARNLL 515
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 61/117 (52%), Gaps = 2/117 (1%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KCG + A+KVF + E+D +SWN ++ A A +G+ LEA+ E+M + PN V
Sbjct: 363 LYAKCGEIILARKVFNLSKEKDVISWNGMIAAYAHHGVGLEAIHLYEKMQE-NGYKPNDV 421
Query: 61 SWSAVIGGFTQNGYDEEAIGML-FRMQAEGLEPNARTLSSVLPACARLQKLSLGKEF 116
++ ++ + +G +E + + + ++ + + ++ C+R +L K
Sbjct: 422 TYVGLLSACSHSGLVDEGLRIFEYMVKDRSIAVRDEHYTCLIDLCSRAGRLGDAKRL 478
>gi|449528002|ref|XP_004170996.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like, partial [Cucumis sativus]
Length = 658
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 191/573 (33%), Positives = 302/573 (52%), Gaps = 43/573 (7%)
Query: 30 VTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEG 89
+ AC G V A + +S P+++ W+A+I G+TQ + I M MQ
Sbjct: 26 INACLHFGDVNYAHKAFREVSE-----PDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQ 80
Query: 90 LEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSAL 149
+ PN T VL AC +GK+ HG + GF SN FV N LV +Y
Sbjct: 81 VHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMY---------- 130
Query: 150 KIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNS 209
+KF G ++ AR +FD++ R ++SW S+ISGYV N
Sbjct: 131 ---AKF------------------GQISYARIVFDKLH----DRTVVSWTSIISGYVQNG 165
Query: 210 LYDEAFSMFRDLLMRD-GIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFV 268
EA ++F++ MR ++P SV+ A ++ L +GK IH L LGL+ + +
Sbjct: 166 DPMEALNVFKE--MRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDI 223
Query: 269 GGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDL 328
+L MY + + A+ F+ +E +L G+ N Y A++LF EM++ ++
Sbjct: 224 VISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNI 283
Query: 329 TPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARL 388
D T+ + A + + ++E + + Y + Y D + T L+DMYAKCGS+ AR
Sbjct: 284 RVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARC 343
Query: 389 AYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGS 448
+ R++ D+V + M+ Y +HGHG+E I + + +G P+ +F+ L+AC ++G
Sbjct: 344 VFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGL 403
Query: 449 IKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLG 508
+K G E F LM + ++P +HY+C+VDLL RAG L +AY+FI +P+ P +WGALL
Sbjct: 404 VKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLS 463
Query: 509 GCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKS 568
C H + G+IAA++L L+P NTG+YV L+NL+A A W+ +A R M + ++K
Sbjct: 464 ACKIHRKVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWTRVANVRLMMTQKGLNKD 523
Query: 569 PGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
G S IE + F+ DRSH +S+EI+ +D
Sbjct: 524 LGHSSIEINGNLETFQVGDRSHPKSKEIFEELD 556
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 111/202 (54%), Gaps = 6/202 (2%)
Query: 28 SVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQA 87
S+ T A GLV A RM E PNL+ W+A+I G+ NGY EEAI + M
Sbjct: 226 SLTTMYAKRGLVEVARFFFNRM-----EKPNLILWNAMISGYANNGYGEEAIKLFREMIT 280
Query: 88 EGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLS 147
+ + ++ T+ S + A A++ L L + GYI+++ + + FV GL+D+Y +CG +
Sbjct: 281 KNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYL 340
Query: 148 ALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVD 207
A +F + + K+ V + +I+GY +G+ EA L+++M+ GV ++ +++ +
Sbjct: 341 ARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKN 400
Query: 208 NSLYDEAFSMFRDLLMRDGIEP 229
+ L E + +F L+ GIEP
Sbjct: 401 SGLVKEGWELFH-LMPDHGIEP 421
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 100/424 (23%), Positives = 178/424 (41%), Gaps = 49/424 (11%)
Query: 27 NSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQ 86
NS+V+ A G + A +++ +VSW+++I G+ QNG EA+ + M+
Sbjct: 124 NSLVSMYAKFGQISYARIVFDKL-----HDRTVVSWTSIISGYVQNGDPMEALNVFKEMR 178
Query: 87 AEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDML 146
++P+ L SV+ A ++ L GK HG +T+ G P +V L +Y + G +
Sbjct: 179 QCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVE 238
Query: 147 SALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYV 206
A F++ N + N +I GY NG EA +LF +M
Sbjct: 239 VARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREM-------------------- 278
Query: 207 DNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDT 266
+ I S T S ++A A + SL + + + DT
Sbjct: 279 ----------------ITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDT 322
Query: 267 FVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSL 326
FV L++MY + + A+ FD + + + +L + G+ + + A+ L++EM
Sbjct: 323 FVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQA 382
Query: 327 DLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHA 386
+ P+ T +L+AC + ++ G ++ G + + +VD+ + G L
Sbjct: 383 GVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQ- 441
Query: 387 RLAYKRIST----PDLVSQNAMLTAYAMHGHGKEG-IAHFRRILASGFRPDHISFLSALS 441
AY I + P + A+L+A +H + G IA + + + H LS L
Sbjct: 442 --AYDFIMSMPIKPGVSVWGALLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQLSNLY 499
Query: 442 ACVH 445
A H
Sbjct: 500 ASAH 503
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/320 (20%), Positives = 141/320 (44%), Gaps = 13/320 (4%)
Query: 252 EIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNV 311
+++ I GL F+ + + D+ A AF E+ + LL G+
Sbjct: 5 QVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKN 64
Query: 312 YTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGT 371
++++ +M + P+ +T +L AC + GKQ+H + G+ S+V +
Sbjct: 65 IVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQN 124
Query: 372 ALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRP 431
+LV MYAK G + +AR+ + ++ +VS ++++ Y +G E + F+ + +P
Sbjct: 125 SLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKP 184
Query: 432 DHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFI 491
D I+ +S ++A + + G L+ ++ + + ++ G + A F
Sbjct: 185 DWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFF 244
Query: 492 KKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNN--TGNYVMLANLFAYA-- 547
++ P+ ++W A++ G ++G +G+ A E+ N + M + + A A
Sbjct: 245 NRME-KPNLILWNAMISGYANNG---YGEEAIKLFREMITKNIRVDSITMRSAVLASAQV 300
Query: 548 -----GRWSDLARTRQKMKD 562
RW D ++ + +D
Sbjct: 301 GSLELARWLDGYISKSEYRD 320
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 77/183 (42%), Gaps = 14/183 (7%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGS+ A+ VF + ++D V W+ ++ +G EA+ CL PN
Sbjct: 331 MYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAI-CLYNEMKQAGVCPNDG 389
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
++ ++ +G +E + M G+EP+ + S V+ R L+ +F
Sbjct: 390 TFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYDF---- 445
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
MS P + V V+ G +LSA KI K + + I+ G+ +
Sbjct: 446 ----IMSMP--IKPGVSVW---GALLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQLS 496
Query: 181 ELF 183
L+
Sbjct: 497 NLY 499
>gi|357468777|ref|XP_003604673.1| hypothetical protein MTR_4g015760 [Medicago truncatula]
gi|355505728|gb|AES86870.1| hypothetical protein MTR_4g015760 [Medicago truncatula]
Length = 838
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 192/603 (31%), Positives = 317/603 (52%), Gaps = 75/603 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KCG ++DA KVF P+ P++V
Sbjct: 286 LYTKCGQMNDAVKVFMEYPK------------------------------------PDVV 309
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQ-AEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
W+++I G+ Q+G E A+ RM +E + P+ TL SV ACA+L LG+ HG+
Sbjct: 310 LWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGF 369
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ R G + + N L+ +Y + G SIKN A
Sbjct: 370 VKRKGLDNKLCLANSLLHLYGKTG------------SIKN-------------------A 398
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
LF +M + IISW++M++ Y DN + +F ++L + I+P T SVL
Sbjct: 399 SNLFREMS----DKDIISWSTMVACYADNGAETDVLDLFNEMLDKR-IKPNWVTVVSVLR 453
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
ACA +++L +G +IH LA+ G + +T V AL++MY + A F+ + + +
Sbjct: 454 ACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMPKKDVIA 513
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
+ G+ N +M +F MLS PD + IL+ S L +++ +HA+ I
Sbjct: 514 WAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQAVCLHAFVI 573
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
+ G++++ IG +L+++YAKC S++ A +K ++ D+V+ ++++ AY HG G+E +
Sbjct: 574 KNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGEEALK 633
Query: 420 HFRRILA-SGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDL 477
F ++ S +P++++F+S LSAC H+G IK G FD+M Y +KP+ +HY MVDL
Sbjct: 634 LFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKLKPNSEHYAIMVDL 693
Query: 478 LSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNY 537
L R GEL A + I +PM +WGALLG C H N++ G++AA L L+PN+ G Y
Sbjct: 694 LGRMGELDMALDVINNMPMQAGPDIWGALLGACRIHQNIKMGEVAAKNLFSLDPNHAGYY 753
Query: 538 VMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
++L+N+++ W + R+ +K++R++K G S +E ++E+ F A DR HD S+ IY
Sbjct: 754 ILLSNIYSVDENWHSATKLRRLVKEKRLNKIVGQSVVELKNEVRSFIAGDRIHDESDHIY 813
Query: 598 TII 600
I+
Sbjct: 814 EIL 816
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 96/392 (24%), Positives = 183/392 (46%), Gaps = 16/392 (4%)
Query: 133 NGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVG-----YCENGNVAEARELFDQME 187
N LV + C LS ++ S+ +K + ++ IV Y ++ A +LF +
Sbjct: 140 NLLVKLLETCCSKLSISQLHSQ-CLKAGLVHDSFIVTKLNVLYARYASIHHAHKLFQETP 198
Query: 188 HLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGI----EPTSFTFGSVLIACAD 243
H R + WN+++ Y + E S+FR + + P +++ L +CA
Sbjct: 199 H----RTVYLWNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEERPDNYSVSIALKSCAG 254
Query: 244 MNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMK 303
+ L GK IH + + D FVG AL+++Y + + A F E + +L
Sbjct: 255 LRKLLLGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSI 314
Query: 304 EDGFEPNVYTWNAMQLFSEML-SLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCG 362
G+E + A+ FS M+ S ++PD T+ + SAC+ L+ + G+ VH + R G
Sbjct: 315 ISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKG 374
Query: 363 YDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFR 422
D+ + + +L+ +Y K GS+K+A ++ +S D++S + M+ YA +G + + F
Sbjct: 375 LDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVACYADNGAETDVLDLFN 434
Query: 423 RILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAG 482
+L +P+ ++ +S L AC +++ G + +L Y + T ++D+ +
Sbjct: 435 EMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCF 494
Query: 483 ELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
+A + ++P D + W L G +G
Sbjct: 495 SPEKAVDLFNRMP-KKDVIAWAVLFSGYADNG 525
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 90/198 (45%), Gaps = 10/198 (5%)
Query: 335 VGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS 394
V ++ + CS L+ Q+H+ ++ G D I T L +YA+ S+ HA ++
Sbjct: 143 VKLLETCCSKLSI----SQLHSQCLKAGLVHDSFIVTKLNVLYARYASIHHAHKLFQETP 198
Query: 395 TPDLVSQNAMLTAYAMHGHGKEGIAHFRRI-----LASGFRPDHISFLSALSACVHAGSI 449
+ NA+L +Y G E ++ FR++ ++ RPD+ S AL +C +
Sbjct: 199 HRTVYLWNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEERPDNYSVSIALKSCAGLRKL 258
Query: 450 KTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
G + + + + ++DL ++ G++ +A + + P PD V+W +++ G
Sbjct: 259 LLGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYP-KPDVVLWTSIISG 317
Query: 510 CVSHGNLEFGQIAADRLI 527
G+ E R++
Sbjct: 318 YEQSGSPELALAFFSRMV 335
>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 848
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 192/599 (32%), Positives = 316/599 (52%), Gaps = 47/599 (7%)
Query: 5 CGSLDDAKK----VFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
C +L D +K VFK+ + D S++ + G V A + M D +
Sbjct: 185 CQTLVDGRKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRD-----MG 239
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A+I G QNG +A+ +L M+ EG+ ++ T++S+LP CA+L +S H Y+
Sbjct: 240 SWNAMISGLIQNGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQLGDISTATLIHLYV 299
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
++G FV N L+++Y +KF GN+ +A+
Sbjct: 300 IKHGLEFELFVSNALINMY-------------AKF------------------GNLGDAQ 328
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
++F QM R ++SWNS+I+ Y N A F + + +G+EP T S+
Sbjct: 329 KVFQQM----FLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQL-NGLEPDLLTLVSLASI 383
Query: 241 CADMNSLRKGKEIHALAIALG-LQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
A + + +H + G L +G A+++MY + + +A F+ I + +
Sbjct: 384 AAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVKDVVS 443
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSL-DLTPDIYTVGIILSACSSLATMERGKQVHAYA 358
G+ N A++++ M ++ + T IL+A + + +++G ++H +
Sbjct: 444 WNTLISGYTQNGLASEAIEVYRMMEECREIKLNQGTWVSILAAYAHVGALQQGMRIHGHL 503
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGI 418
I+ DV +GT L+D+Y KCG L A + ++ V NA+++ + +HGHG++ +
Sbjct: 504 IKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRESSVPWNAIISCHGIHGHGEKAL 563
Query: 419 AHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLL 478
FR + G +PDH++F+S LSAC H+G + G FF LM Y +KPSLKHY CMVDLL
Sbjct: 564 KLFREMQDEGVKPDHVTFISLLSACSHSGLVDEGKWFFHLMQEYGIKPSLKHYGCMVDLL 623
Query: 479 SRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYV 538
RAG L AY+FIK +P+ PD+ +WGALLG C HGN+E G+ A+DRL E++ N G YV
Sbjct: 624 GRAGFLEMAYDFIKDMPLHPDASIWGALLGACRIHGNIELGKFASDRLFEVDSENVGYYV 683
Query: 539 MLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
+L+N++A G+W + + R ++R + K+PG S IE + F ++SH + +EIY
Sbjct: 684 LLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSSIEVNRRVDIFYTGNQSHPKCKEIY 742
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 116/466 (24%), Positives = 208/466 (44%), Gaps = 43/466 (9%)
Query: 55 ETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQ-AEGLEPNARTLSSVLPACARLQKLSLG 113
+ ++ +W+++I + +NG+ EAI +++ + + T VL AC Q L G
Sbjct: 135 QRKDVYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKAC---QTLVDG 191
Query: 114 KEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCEN 173
++ H ++ + GF + FV L+ +Y R G + A +F ++ S N +I G +N
Sbjct: 192 RKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQN 251
Query: 174 GNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFT 233
GN A+A ++ D+M +GI S T
Sbjct: 252 GNAAQALDVLDEMR------------------------------------LEGINMDSVT 275
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
S+L CA + + IH I GL+ + FV AL+ MY ++ +L AQ F ++
Sbjct: 276 VASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALINMYAKFGNLGDAQKVFQQMF 335
Query: 294 NIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ 353
+ + +E N A F +M L PD+ T+ + S + + +
Sbjct: 336 LRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVSLASIAAQSRDYKNSRS 395
Query: 354 VHAYAIRCGYDSD-VHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHG 412
VH + +R G+ + V IG A++DMYAK G + A + I D+VS N +++ Y +G
Sbjct: 396 VHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTLISGYTQNG 455
Query: 413 HGKEGIAHFRRI-LASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHY 471
E I +R + + + +++S L+A H G+++ G + ++ +
Sbjct: 456 LASEAIEVYRMMEECREIKLNQGTWVSILAAYAHVGALQQGMRIHGHLIKTNLHLDVFVG 515
Query: 472 TCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
TC++DL + G L +A ++P SV W A++ HG+ E
Sbjct: 516 TCLIDLYGKCGRLVDAMCLFYQVP-RESSVPWNAIISCHGIHGHGE 560
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 110/437 (25%), Positives = 197/437 (45%), Gaps = 17/437 (3%)
Query: 138 VYRRCGDMLSALKIFSKFSIKNEVSCNTIIVG----YCENGNVAEARELFDQMEHLGVQR 193
++ C L A ++ + + ++ N I + Y G+V+ +R FDQ++ ++
Sbjct: 82 LFDSCTKTLLAKRLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRGTFDQIQ----RK 137
Query: 194 GIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEI 253
+ +WNSMIS YV N + EA F LL+ + +TF VL AC +L G++I
Sbjct: 138 DVYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKAC---QTLVDGRKI 194
Query: 254 HALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYT 313
H LG Q D FV +L+ MY R+ + A+ FD++ + G N
Sbjct: 195 HCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNA 254
Query: 314 WNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTAL 373
A+ + EM + D TV IL C+ L + +H Y I+ G + ++ + AL
Sbjct: 255 AQALDVLDEMRLEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNAL 314
Query: 374 VDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDH 433
++MYAK G+L A+ ++++ D+VS N+++ AY + F ++ +G PD
Sbjct: 315 INMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDL 374
Query: 434 ISFLSALSACVHAGSIKTGSEFFD-LMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIK 492
++ +S S + K +M + ++ ++D+ ++ G + A++
Sbjct: 375 LTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFN 434
Query: 493 KIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPN---NTGNYVMLANLFAYAGR 549
IP+ D V W L+ G +G L I R++E N G +V + +A+ G
Sbjct: 435 LIPVK-DVVSWNTLISGYTQNG-LASEAIEVYRMMEECREIKLNQGTWVSILAAYAHVGA 492
Query: 550 WSDLARTRQKMKDRRMH 566
R + +H
Sbjct: 493 LQQGMRIHGHLIKTNLH 509
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 116/419 (27%), Positives = 181/419 (43%), Gaps = 73/419 (17%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G+L DA+KVF+ M RD VSWNS++ A
Sbjct: 317 MYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAA---------------------------- 348
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+ QN A G F+MQ GLEP+ TL S+ A+ + + HG+I
Sbjct: 349 --------YEQNDDPVTARGFFFKMQLNGLEPDLLTLVSLASIAAQSRDYKNSRSVHGFI 400
Query: 121 TRNGFMSNPFVV-NGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
R G++ V+ N ++D+Y + G + SA K+F+ +K+ VS NT+I GY +NG +EA
Sbjct: 401 MRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTLISGYTQNGLASEA 460
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
E++ ME R++ + G T+ S+L
Sbjct: 461 IEVYRMMEEC-----------------------------REIKLNQG------TWVSILA 485
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
A A + +L++G IH I L D FVG L+++Y + LV A F ++ ++
Sbjct: 486 AYAHVGALQQGMRIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRESSVP 545
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
+ + A++LF EM + PD T +LSACS ++ GK
Sbjct: 546 WNAIISCHGIHGHGEKALKLFREMQDEGVKPDHVTFISLLSACSHSGLVDEGKWFFHLMQ 605
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST-PDLVSQNAMLTAYAMHGHGKEG 417
G + +VD+ + G L+ A K + PD A+L A +HG+ + G
Sbjct: 606 EYGIKPSLKHYGCMVDLLGRAGFLEMAYDFIKDMPLHPDASIWGALLGACRIHGNIELG 664
>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 174/535 (32%), Positives = 296/535 (55%), Gaps = 39/535 (7%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
++VSW+ ++ + +N + EE++ + +M+ G +PN T+S L +C L+ ++GK H
Sbjct: 201 DMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKPNNFTISGALKSCLGLEAFNVGKSVH 260
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
G + + + FV L+++Y + G+++
Sbjct: 261 GCALKGCYDHDLFVGIALLELYAKSGEII------------------------------- 289
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRD-GIEPTSFTFGS 236
+A+ LF++M + +I W+ MI+ Y + EA +F L MR + P +FTF S
Sbjct: 290 DAQRLFEEMP----KTDLIPWSLMIARYAQSDRSKEALDLF--LRMRQTSVVPNNFTFAS 343
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
VL ACA SL GK+IH+ + GL S+ FV A++++Y + ++ + F+E+ +
Sbjct: 344 VLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRN 403
Query: 297 NLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHA 356
++ G+ AM LF+ ML D+ P T +L A +SLA +E G Q+H+
Sbjct: 404 DVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHS 463
Query: 357 YAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKE 416
I+ Y+ D + +L+DMYAKCG + ARL + +++ D VS NAM+ Y+MHG E
Sbjct: 464 LTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHGMSME 523
Query: 417 GIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMV 475
+ F + + +P+ ++F+ LSAC +AG + G F+ M+ YD+KP ++HYTCMV
Sbjct: 524 ALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKGQAHFESMSKDYDIKPCIEHYTCMV 583
Query: 476 DLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTG 535
LL R G EA + I +I P ++W ALLG CV H ++ G++ A ++E+EP++
Sbjct: 584 WLLGRLGRFDEAMKLIGEIAYQPSVMVWRALLGACVIHKKVDLGRVCAQHVLEMEPHDDA 643
Query: 536 NYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSH 590
+V+L+N++A AGRW ++A R+ M+ +++ K PG SW+E++ +H F D SH
Sbjct: 644 THVLLSNMYATAGRWDNVAFVRKYMQKKKVRKEPGLSWVENQGVVHYFSVGDTSH 698
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 109/471 (23%), Positives = 212/471 (45%), Gaps = 39/471 (8%)
Query: 46 LERMSSLDNETP--NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPA 103
L+ S L +E P N +S+ + G++++ +A+ + R+ EG E N +++L
Sbjct: 86 LQDASKLFDEMPQTNTISFVTLAQGYSRDHQFHQALHFILRIFKEGHEVNPFVFTTLLKL 145
Query: 104 CARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSC 163
+ L H + + G ++ FV L+D Y G++ A +F K+ VS
Sbjct: 146 LVSMDLAHLCWTLHACVYKLGHHADAFVGTALIDAYSVRGNVDVARHVFDDICCKDMVSW 205
Query: 164 NTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLM 223
++ Y EN E+ +LF+QM I GY
Sbjct: 206 TGMVACYAENCFYEESLQLFNQMR--------------IMGY------------------ 233
Query: 224 RDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLV 283
+P +FT L +C + + GK +H A+ D FVG AL+E+Y + +++
Sbjct: 234 ----KPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEII 289
Query: 284 AAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACS 343
AQ F+E+ + + + + + + A+ LF M + P+ +T +L AC+
Sbjct: 290 DAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACA 349
Query: 344 SLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNA 403
S +++ GKQ+H+ ++ G +S+V + A++D+YAKCG ++++ ++ + + V+ N
Sbjct: 350 SSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNT 409
Query: 404 MLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYD 463
++ Y G G+ + F +L +P +++ S L A +++ G + L
Sbjct: 410 IIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTM 469
Query: 464 VKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
++D+ ++ G + +A K+ D V W A++ G HG
Sbjct: 470 YNKDTVVANSLIDMYAKCGRINDARLTFDKMN-KRDEVSWNAMICGYSMHG 519
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/381 (28%), Positives = 178/381 (46%), Gaps = 45/381 (11%)
Query: 34 AANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPN 93
A +G +++A E M D L+ WS +I + Q+ +EA+ + RM+ + PN
Sbjct: 283 AKSGEIIDAQRLFEEMPKTD-----LIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPN 337
Query: 94 ARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFS 153
T +SVL ACA L LGK+ H + + G SN FV N ++DVY +CG++ +++K+F
Sbjct: 338 NFTFASVLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFE 397
Query: 154 KFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDE 213
+ +N+V+ NTIIVGY + G+ A LF M
Sbjct: 398 ELPDRNDVTWNTIIVGYVQLGDGERAMNLFTHM--------------------------- 430
Query: 214 AFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALV 273
+ ++PT T+ SVL A A + +L G +IH+L I DT V +L+
Sbjct: 431 ---------LEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDTVVANSLI 481
Query: 274 EMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIY 333
+MY + + A++ FD++ + + G+ + + A+ LF M D P+
Sbjct: 482 DMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHGMSMEALNLFDMMQHTDCKPNKL 541
Query: 334 TVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIG--TALVDMYAKCGSLKHARLAYK 391
T +LSACS+ + +G Q H ++ YD I T +V + + G A
Sbjct: 542 TFVGVLSACSNAGLLYKG-QAHFESMSKDYDIKPCIEHYTCMVWLLGRLGRFDEAMKLIG 600
Query: 392 RIS-TPDLVSQNAMLTAYAMH 411
I+ P ++ A+L A +H
Sbjct: 601 EIAYQPSVMVWRALLGACVIH 621
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 178/356 (50%), Gaps = 10/356 (2%)
Query: 164 NTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLM 223
N ++ Y ++ ++ +A +LFD+M Q IS+ ++ GY + + +A F +
Sbjct: 74 NILLNFYVQSNSLQDASKLFDEMP----QTNTISFVTLAQGYSRDHQFHQALH-FILRIF 128
Query: 224 RDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLV 283
++G E F F ++L M+ +HA LG +D FVG AL++ Y ++
Sbjct: 129 KEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAFVGTALIDAYSVRGNVD 188
Query: 284 AAQMAFDEI--ENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSA 341
A+ FD+I +++ + G + + N + ++QLF++M + P+ +T+ L +
Sbjct: 189 VARHVFDDICCKDMVSWTGMVA--CYAENCFYEESLQLFNQMRIMGYKPNNFTISGALKS 246
Query: 342 CSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQ 401
C L GK VH A++ YD D+ +G AL+++YAK G + A+ ++ + DL+
Sbjct: 247 CLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEMPKTDLIPW 306
Query: 402 NAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY 461
+ M+ YA KE + F R+ + P++ +F S L AC + S+ G + +
Sbjct: 307 SLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQIHSCVLK 366
Query: 462 YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
+ + ++ ++D+ ++ GE+ + + +++P D V W ++ G V G+ E
Sbjct: 367 FGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRND-VTWNTIIVGYVQLGDGE 421
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 103/229 (44%), Gaps = 36/229 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KCG ++++ K+F+ +P+R+ V+WN+++
Sbjct: 382 VYAKCGEIENSMKLFEELPDRNDVTWNTIIV----------------------------- 412
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
G+ Q G E A+ + M ++P T SSVL A A L L G + H
Sbjct: 413 -------GYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLT 465
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ + + V N L+D+Y +CG + A F K + ++EVS N +I GY +G EA
Sbjct: 466 IKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHGMSMEAL 525
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEP 229
LFD M+H + +++ ++S + L + + F + I+P
Sbjct: 526 NLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKGQAHFESMSKDYDIKP 574
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 114/263 (43%), Gaps = 9/263 (3%)
Query: 250 GKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEP 309
GK +H + G D F L+ Y + L A FDE+ + G+
Sbjct: 54 GKHLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSR 113
Query: 310 NVYTWNAMQLFSEMLS--LDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDV 367
+ A+ + ++ P ++T + L LA + +HA + G+ +D
Sbjct: 114 DHQFHQALHFILRIFKEGHEVNPFVFTTLLKLLVSMDLAHL--CWTLHACVYKLGHHADA 171
Query: 368 HIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILAS 427
+GTAL+D Y+ G++ AR + I D+VS M+ YA + +E + F ++
Sbjct: 172 FVGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIM 231
Query: 428 GFRPDHISFLSALSACVHAGSIKTGSEFFD--LMAYYDVKPSLKHYTCMVDLLSRAGELG 485
G++P++ + AL +C+ + G L YD L +++L +++GE+
Sbjct: 232 GYKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYD--HDLFVGIALLELYAKSGEII 289
Query: 486 EAYEFIKKIPMAPDSVMWGALLG 508
+A +++P D + W ++
Sbjct: 290 DAQRLFEEMP-KTDLIPWSLMIA 311
>gi|357116318|ref|XP_003559929.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Brachypodium distachyon]
Length = 646
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 179/543 (32%), Positives = 293/543 (53%), Gaps = 31/543 (5%)
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNA------RTLSSVLPACARLQKLSLGK 114
SW+ I G AI + RM+A +P A +L L +CA L +LG
Sbjct: 21 SWAHQIRVAASQGDFHHAIALFLRMRAS--DPAAACSSVLTSLPGALKSCAALGLRALGA 78
Query: 115 EFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
H R+G ++ F N L+++Y K+ + S E+ + +++
Sbjct: 79 SLHALALRSGAFADRFAANALLNLY---------CKLPAPPSHSPEMDGSAVVL------ 123
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTF 234
R++FD+M ++ ++SWN+++ G ++ + EA + R++ RDG +P SFT
Sbjct: 124 --ESVRKVFDEMP----EKDVVSWNTLVLGCAESGRHGEALGLVREM-WRDGCKPDSFTL 176
Query: 235 GSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIEN 294
SVL A+ +R+G E+H A G D FVG +L++MY + FD +
Sbjct: 177 SSVLPIFAEGADVRRGMELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPV 236
Query: 295 IENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV 354
+ +L G N A+ LF ML + P T ++ AC +LA++ GKQ+
Sbjct: 237 RDAILWNSMLAGCAQNGSVDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQL 296
Query: 355 HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHG 414
HAY IR G+D +V I ++L+DMY KCG++ AR + RI +PD+VS AM+ +A+HG
Sbjct: 297 HAYVIRGGFDGNVFISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPA 356
Query: 415 KEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTC 473
+E + F R+ +P+HI+FL+ L+AC HAG + G ++F+ M+ +Y + PSL+H+
Sbjct: 357 REALVLFDRMELGNLKPNHITFLAVLTACSHAGLVDKGWKYFNSMSDHYGIVPSLEHHAA 416
Query: 474 MVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNN 533
+ D L R G+L EAY FI + + P + +W LL C H N + A ++ +LEP +
Sbjct: 417 LADTLGRPGKLEEAYNFISGMKIKPTASVWSTLLRACKVHKNTVLAEEVAKKIFDLEPRS 476
Query: 534 TGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRS 593
G++++L+N ++ +GRW++ A R+ M+ + M K P CSWIE +++ H F A D+SH
Sbjct: 477 MGSHIILSNTYSSSGRWNEAAHLRKSMRKKGMQKEPACSWIEVKNKQHVFVAHDKSHPWY 536
Query: 594 EEI 596
E I
Sbjct: 537 ERI 539
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 108/401 (26%), Positives = 175/401 (43%), Gaps = 101/401 (25%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
M G L+ +KVF MPE+D VSWN++V CA
Sbjct: 116 MDGSAVVLESVRKVFDEMPEKDVVSWNTLVLGCA-------------------------- 149
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
++G EA+G++ M +G +P++ TLSSVLP A + G E HG+
Sbjct: 150 ----------ESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIFAEGADVRRGMELHGFA 199
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
TRNGF + FV + L+D+Y C ++K+F +++ + N+++ G +NG+V EA
Sbjct: 200 TRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILWNSMLAGCAQNGSVDEAL 259
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LF +M H GI+P TF S++ A
Sbjct: 260 GLFRRMLH------------------------------------SGIKPMPVTFSSLIPA 283
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C ++ SL GK++HA I G + F+ +L++MYC+ ++ A+ FD I++
Sbjct: 284 CGNLASLLLGKQLHAYVIRGGFDGNVFISSSLIDMYCKCGNVSIARRIFDRIQS------ 337
Query: 301 KMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSSLA 346
P++ +W AM LF M +L P+ T +L+ACS
Sbjct: 338 --------PDIVSWTAMIMGHALHGPAREALVLFDRMELGNLKPNHITFLAVLTACSHAG 389
Query: 347 TMERG-KQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHA 386
+++G K ++ + G + AL D + G L+ A
Sbjct: 390 LVDKGWKYFNSMSDHYGIVPSLEHHAALADTLGRPGKLEEA 430
>gi|334186228|ref|NP_191896.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332646951|gb|AEE80472.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 884
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 195/572 (34%), Positives = 307/572 (53%), Gaps = 43/572 (7%)
Query: 27 NSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQ 86
N+++ G + +A L +M++ D +V+W+++I G+ QN +EA+ M
Sbjct: 324 NALIAMYTRCGKMPQAERILRQMNNAD-----VVTWNSLIKGYVQNLMYKEALEFFSDMI 378
Query: 87 AEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDML 146
A G + + +++S++ A RL L G E H Y+ ++G+ SN V N L+D+Y +C
Sbjct: 379 AAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTC 438
Query: 147 SALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYV 206
+ F + K+ +ISW ++I+GY
Sbjct: 439 YMGRAFLRMHDKD-----------------------------------LISWTTVIAGYA 463
Query: 207 DNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDT 266
N + EA +FRD+ + +E GS+L A + + S+ KEIH + GL DT
Sbjct: 464 QNDCHVEALELFRDV-AKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLL-DT 521
Query: 267 FVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSL 326
+ LV++Y + +++ A F+ I+ + + N A++LF M+
Sbjct: 522 VIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVET 581
Query: 327 DLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHA 386
L+ D + ILSA +SL+ + +G+++H Y +R G+ + I A+VDMYA CG L+ A
Sbjct: 582 GLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSA 641
Query: 387 RLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHA 446
+ + RI L+ +M+ AY MHG GK + F ++ PDHISFL+ L AC HA
Sbjct: 642 KAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHA 701
Query: 447 GSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGA 505
G + G F +M + Y+++P +HY C+VD+L RA + EA+EF+K + P + +W A
Sbjct: 702 GLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCA 761
Query: 506 LLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRM 565
LL C SH E G+IAA RL+ELEP N GN V+++N+FA GRW+D+ + R KMK M
Sbjct: 762 LLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGM 821
Query: 566 HKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
K PGCSWIE ++HKF A D+SH S+EIY
Sbjct: 822 EKHPGCSWIEMDGKVHKFTARDKSHPESKEIY 853
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 133/517 (25%), Positives = 225/517 (43%), Gaps = 76/517 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKCGSLDDA+KVF MP+R +WN++
Sbjct: 125 MYGKCGSLDDAEKVFDEMPDRTAFAWNTM------------------------------- 153
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
IG + NG A+ + + M+ EG+ + ++L ACA+L+ + G E H +
Sbjct: 154 -----IGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLL 208
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNE-VSCNTIIVGYCENGNVAEA 179
+ G+ S F+VN LV +Y + D+ +A ++F F K + V N+I+ Y +G E
Sbjct: 209 VKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLET 268
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
ELF +M H+ G P S+T S L
Sbjct: 269 LELFREM-HM-----------------------------------TGPAPNSYTIVSALT 292
Query: 240 ACADMNSLRKGKEIHALAIALGLQ-SDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
AC + + GKEIHA + S+ +V AL+ MY R + A+ ++ N + +
Sbjct: 293 ACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVV 352
Query: 299 LGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYA 358
G+ N+ A++ FS+M++ D ++ I++A L+ + G ++HAY
Sbjct: 353 TWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYV 412
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGI 418
I+ G+DS++ +G L+DMY+KC + A+ R+ DL+S ++ YA + E +
Sbjct: 413 IKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEAL 472
Query: 419 AHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLL 478
FR + D + S L A S+ E + + ++ +VD+
Sbjct: 473 ELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTVIQNE-LVDVY 531
Query: 479 SRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
+ +G A + I D V W +++ +GN
Sbjct: 532 GKCRNMGYATRVFESIK-GKDVVSWTSMISSSALNGN 567
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 172/334 (51%), Gaps = 8/334 (2%)
Query: 150 KIFSKF-SIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDN 208
+IF F S + + ++ Y + G++ +A ++FD+M R +WN+MI YV N
Sbjct: 105 RIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMP----DRTAFAWNTMIGAYVSN 160
Query: 209 SLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFV 268
A +++ ++ + +G+ +F ++L ACA + +R G E+H+L + LG S F+
Sbjct: 161 GEPASALALYWNMRV-EGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFI 219
Query: 269 GGALVEMYCRYQDLVAAQMAFDEI-ENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLD 327
ALV MY + DL AA+ FD E + +L + + + ++LF EM
Sbjct: 220 VNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTG 279
Query: 328 LTPDIYTVGIILSACSSLATMERGKQVHAYAIRCG-YDSDVHIGTALVDMYAKCGSLKHA 386
P+ YT+ L+AC + + GK++HA ++ + S++++ AL+ MY +CG + A
Sbjct: 280 PAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQA 339
Query: 387 RLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHA 446
++++ D+V+ N+++ Y + KE + F ++A+G + D +S S ++A
Sbjct: 340 ERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRL 399
Query: 447 GSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSR 480
++ G E + + +L+ ++D+ S+
Sbjct: 400 SNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSK 433
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 107/432 (24%), Positives = 173/432 (40%), Gaps = 85/432 (19%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC + F M ++D +SW +V+ A N +EALE
Sbjct: 430 MYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALE---------------- 473
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFR-MQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
LFR + + +E + L S+L A + L+ + + KE H +
Sbjct: 474 ---------------------LFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCH 512
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
I R G + + + N LVDVY +C +M A ++F K+ VS ++I NGN +EA
Sbjct: 513 ILRKGLL-DTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEA 571
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
ELF +M + G+ S +L
Sbjct: 572 VELFRRM------------------------------------VETGLSADSVALLCILS 595
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
A A +++L KG+EIH + G + + A+V+MY DL +A+ FD IE L
Sbjct: 596 AAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQ 655
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV----- 354
+ + + A++LF +M +++PD + +L ACS ++ G+
Sbjct: 656 YTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIME 715
Query: 355 HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST-PDLVSQNAMLTAYAMHGH 413
H Y + + V LVDM + + A K + T P A+L A H
Sbjct: 716 HEYELEPWPEHYV----CLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSE 771
Query: 414 GKEGIAHFRRIL 425
+ G +R+L
Sbjct: 772 KEIGEIAAQRLL 783
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 141/342 (41%), Gaps = 79/342 (23%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+YGKC ++ A +VF+ + +D VSW S++++ A NG NE+
Sbjct: 530 VYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNG----------------NES---- 569
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
EA+ + RM GL ++ L +L A A L L+ G+E H Y+
Sbjct: 570 ----------------EAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYL 613
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R GF + +VD+Y CGD+ SA +F + K + ++I Y +G A
Sbjct: 614 LRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAV 673
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFR-------------------DL 221
ELFD+M H V IS+ +++ L DE + D+
Sbjct: 674 ELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDM 733
Query: 222 LMRDG-------------IEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFV 268
L R EPT+ + ++L AC + KEI +A L+ +
Sbjct: 734 LGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSE----KEIGEIAAQRLLELEPKN 789
Query: 269 GGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPN 310
G LV + ++ A Q ++++E + KMK G E +
Sbjct: 790 PGNLVLV----SNVFAEQGRWNDVEKVR---AKMKASGMEKH 824
>gi|357470275|ref|XP_003605422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506477|gb|AES87619.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 839
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 174/549 (31%), Positives = 298/549 (54%), Gaps = 41/549 (7%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRM-QAEGLEPNARTLSSVLPACARLQKLSLGKEF 116
N+V+W+ +I Q GY++EAI + M + G P+ TL+ ++ CA +Q LSLGKE
Sbjct: 225 NVVTWTLMITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKEL 284
Query: 117 HGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNV 176
H ++ R+G + + V LVD+Y +CG V
Sbjct: 285 HSWVIRSGLVLDLCVGCSLVDMYAKCGL-------------------------------V 313
Query: 177 AEARELFDQMEHLGVQRGIISWNSMISGYV--DNSLYDEAFSMFRDLLMRDGIEPTSFTF 234
EAR++FD M + ++SW ++++GYV EA MF ++L++ G+ P FTF
Sbjct: 314 QEARKVFDGMR----EHNVMSWTALVNGYVRGGGGYEREAMRMFSNMLLQGGVAPNCFTF 369
Query: 235 GSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIEN 294
VL ACA + G+++H I LGL + VG LV +Y + + +A+ FD +
Sbjct: 370 SGVLKACASLPDFDFGEQVHGQTIKLGLSAIDCVGNGLVSVYAKSGRMESARKCFDVLFE 429
Query: 295 IENLLGKMKEDGFEPNVYTWNAMQ-LFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ 353
+NL+ + D + N+ Q L E+ + +T +LS + + T+ +G+Q
Sbjct: 430 -KNLVSETVVDDTNVKDFNLNSEQDLDREVEYVGSGVSSFTYASLLSGAACIGTIGKGEQ 488
Query: 354 VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGH 413
+HA ++ G+ +D+ + AL+ MY+KCG+ + A + + ++++ +++ +A HG
Sbjct: 489 IHAMVVKIGFRTDLSVNNALISMYSKCGNKEAALQVFNDMEDCNVITWTSIINGFAKHGF 548
Query: 414 GKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYT 472
+ + F +L +G +P+ +++++ LSAC H G I + F M + + P ++HY
Sbjct: 549 ASKALELFYNMLETGVKPNDVTYIAVLSACSHVGLIDEAWKHFTSMRDNHGIVPRMEHYA 608
Query: 473 CMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPN 532
CMVDLL R+G L EA EFI +P D+++W LG C H N + G+ AA ++E EP+
Sbjct: 609 CMVDLLGRSGLLSEAIEFINSMPFDADALVWRTFLGSCRVHRNTKLGEHAAKMILEREPH 668
Query: 533 NTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDR 592
+ Y++L+NL+A GRW D+A R+ MK +++ K G SWIE +++HKF D H +
Sbjct: 669 DPATYILLSNLYATEGRWEDVAAIRKNMKQKQITKEAGSSWIEVENQVHKFHVGDTLHPK 728
Query: 593 SEEIYTIID 601
+++IY +D
Sbjct: 729 AQQIYEKLD 737
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 115/498 (23%), Positives = 217/498 (43%), Gaps = 41/498 (8%)
Query: 22 DCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGM 81
D + NS++T + + + A + S++N ++VS+S++I F N +A+ M
Sbjct: 86 DTLLLNSLITLYSKSNDPITAFSIFQ---SMENSKRDVVSYSSIISCFANNRNCLKAVEM 142
Query: 82 LFRMQ-AEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVN-GLVDVY 139
++ +G+ PN ++V+ AC + G G++ + G+ + V L+D++
Sbjct: 143 FDQLLLQDGVYPNEYCFTAVIRACLKGGFFKTGLCLFGFVLKTGYFDSHVCVGCELIDMF 202
Query: 140 RRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWN 199
V C ++ AR++FD+M ++ +++W
Sbjct: 203 ----------------------------VKGCSLADLESARKVFDKMR----EKNVVTWT 230
Query: 200 SMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIA 259
MI+ DEA +F ++L+ G P FT ++ CA++ L GKE+H+ I
Sbjct: 231 LMITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELHSWVIR 290
Query: 260 LGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEP--NVYTWNAM 317
GL D VG +LV+MY + + A+ FD + + +G+ Y AM
Sbjct: 291 SGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTALVNGYVRGGGGYEREAM 350
Query: 318 QLFSEM-LSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDM 376
++FS M L + P+ +T +L AC+SL + G+QVH I+ G + +G LV +
Sbjct: 351 RMFSNMLLQGGVAPNCFTFSGVLKACASLPDFDFGEQVHGQTIKLGLSAIDCVGNGLVSV 410
Query: 377 YAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISF 436
YAK G ++ AR + + +LVS+ + + R + G ++
Sbjct: 411 YAKSGRMESARKCFDVLFEKNLVSETVVDDTNVKDFNLNSEQDLDREVEYVGSGVSSFTY 470
Query: 437 LSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPM 496
S LS G+I G + ++ + L ++ + S+ G A + +
Sbjct: 471 ASLLSGAACIGTIGKGEQIHAMVVKIGFRTDLSVNNALISMYSKCGNKEAALQVFNDMED 530
Query: 497 APDSVMWGALLGGCVSHG 514
+ + W +++ G HG
Sbjct: 531 C-NVITWTSIINGFAKHG 547
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 157/352 (44%), Gaps = 71/352 (20%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG + +A+KVF M E + +SW ++V NG V
Sbjct: 306 MYAKCGLVQEARKVFDGMREHNVMSWTALV-----NGYVR-------------------- 340
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
GG GY+ EA+ M M + G+ PN T S VL ACA L G++ HG
Sbjct: 341 ------GG---GGYEREAMRMFSNMLLQGGVAPNCFTFSGVLKACASLPDFDFGEQVHGQ 391
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ G + V NGLV VY + G M SA K F KN VS + ++ N+
Sbjct: 392 TIKLGLSAIDCVGNGLVSVYAKSGRMESARKCFDVLFEKNLVSETVVDDTNVKDFNLNSE 451
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
++L ++E++G SG +SFT+ S+L
Sbjct: 452 QDLDREVEYVG------------SGV------------------------SSFTYASLLS 475
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
A + ++ KG++IHA+ + +G ++D V AL+ MY + + AA F+++E+ +
Sbjct: 476 GAACIGTIGKGEQIHAMVVKIGFRTDLSVNNALISMYSKCGNKEAALQVFNDMEDCNVIT 535
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG 351
+GF + + A++LF ML + P+ T +LSACS + ++
Sbjct: 536 WTSIINGFAKHGFASKALELFYNMLETGVKPNDVTYIAVLSACSHVGLIDEA 587
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 105/212 (49%), Gaps = 14/212 (6%)
Query: 22 DCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAV----IGGFTQNGYDEE 77
DCV N +V+ A +G + A +C + + NLVS + V + F N E+
Sbjct: 401 DCVG-NGLVSVYAKSGRMESARKCFDVLFE-----KNLVSETVVDDTNVKDFNLNS--EQ 452
Query: 78 AIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVD 137
+ G+ ++ T +S+L A + + G++ H + + GF ++ V N L+
Sbjct: 453 DLDREVEYVGSGV--SSFTYASLLSGAACIGTIGKGEQIHAMVVKIGFRTDLSVNNALIS 510
Query: 138 VYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIIS 197
+Y +CG+ +AL++F+ N ++ +II G+ ++G ++A ELF M GV+ ++
Sbjct: 511 MYSKCGNKEAALQVFNDMEDCNVITWTSIINGFAKHGFASKALELFYNMLETGVKPNDVT 570
Query: 198 WNSMISGYVDNSLYDEAFSMFRDLLMRDGIEP 229
+ +++S L DEA+ F + GI P
Sbjct: 571 YIAVLSACSHVGLIDEAWKHFTSMRDNHGIVP 602
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 60/137 (43%), Gaps = 10/137 (7%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG+ + A +VF M + + ++W S++ A +G +ALE M PN V
Sbjct: 511 MYSKCGNKEAALQVFNDMEDCNVITWTSIINGFAKHGFASKALELFYNMLE-TGVKPNDV 569
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQ-AEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
++ AV+ + G +EA M+ G+ P + ++ R LS EF
Sbjct: 570 TYIAVLSACSHVGLIDEAWKHFTSMRDNHGIVPRMEHYACMVDLLGRSGLLSEAIEF--- 626
Query: 120 ITRNGFMSNPFVVNGLV 136
S PF + LV
Sbjct: 627 -----INSMPFDADALV 638
>gi|7523419|emb|CAB86438.1| putative protein [Arabidopsis thaliana]
Length = 1017
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 195/572 (34%), Positives = 307/572 (53%), Gaps = 43/572 (7%)
Query: 27 NSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQ 86
N+++ G + +A L +M++ D +V+W+++I G+ QN +EA+ M
Sbjct: 287 NALIAMYTRCGKMPQAERILRQMNNAD-----VVTWNSLIKGYVQNLMYKEALEFFSDMI 341
Query: 87 AEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDML 146
A G + + +++S++ A RL L G E H Y+ ++G+ SN V N L+D+Y +C
Sbjct: 342 AAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTC 401
Query: 147 SALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYV 206
+ F + K+ +ISW ++I+GY
Sbjct: 402 YMGRAFLRMHDKD-----------------------------------LISWTTVIAGYA 426
Query: 207 DNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDT 266
N + EA +FRD+ + +E GS+L A + + S+ KEIH + GL DT
Sbjct: 427 QNDCHVEALELFRDV-AKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLL-DT 484
Query: 267 FVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSL 326
+ LV++Y + +++ A F+ I+ + + N A++LF M+
Sbjct: 485 VIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVET 544
Query: 327 DLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHA 386
L+ D + ILSA +SL+ + +G+++H Y +R G+ + I A+VDMYA CG L+ A
Sbjct: 545 GLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSA 604
Query: 387 RLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHA 446
+ + RI L+ +M+ AY MHG GK + F ++ PDHISFL+ L AC HA
Sbjct: 605 KAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHA 664
Query: 447 GSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGA 505
G + G F +M + Y+++P +HY C+VD+L RA + EA+EF+K + P + +W A
Sbjct: 665 GLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCA 724
Query: 506 LLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRM 565
LL C SH E G+IAA RL+ELEP N GN V+++N+FA GRW+D+ + R KMK M
Sbjct: 725 LLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGM 784
Query: 566 HKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
K PGCSWIE ++HKF A D+SH S+EIY
Sbjct: 785 EKHPGCSWIEMDGKVHKFTARDKSHPESKEIY 816
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 117/466 (25%), Positives = 209/466 (44%), Gaps = 42/466 (9%)
Query: 54 NETPNLVS--WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLS 111
+E P+ + W+ +IG + NG A+ + + M+ EG+ + ++L ACA+L+ +
Sbjct: 103 DEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIR 162
Query: 112 LGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNE-VSCNTIIVGY 170
G E H + + G+ S F+VN LV +Y + D+ +A ++F F K + V N+I+ Y
Sbjct: 163 SGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSY 222
Query: 171 CENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPT 230
+G E ELF +M H+ G P
Sbjct: 223 STSGKSLETLELFREM-HM-----------------------------------TGPAPN 246
Query: 231 SFTFGSVLIACADMNSLRKGKEIHALAIALGLQ-SDTFVGGALVEMYCRYQDLVAAQMAF 289
S+T S L AC + + GKEIHA + S+ +V AL+ MY R + A+
Sbjct: 247 SYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERIL 306
Query: 290 DEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATME 349
++ N + + G+ N+ A++ FS+M++ D ++ I++A L+ +
Sbjct: 307 RQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLL 366
Query: 350 RGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYA 409
G ++HAY I+ G+DS++ +G L+DMY+KC + A+ R+ DL+S ++ YA
Sbjct: 367 AGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYA 426
Query: 410 MHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLK 469
+ E + FR + D + S L A S+ E + + ++
Sbjct: 427 QNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTVI 486
Query: 470 HYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
+VD+ + +G A + I D V W +++ +GN
Sbjct: 487 QNE-LVDVYGKCRNMGYATRVFESIK-GKDVVSWTSMISSSALNGN 530
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 140/559 (25%), Positives = 237/559 (42%), Gaps = 80/559 (14%)
Query: 27 NSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQ 86
N++V+ A N + L R+ E + V W++++ ++ +G E + + M
Sbjct: 184 NALVSMYAKN----DDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMH 239
Query: 87 AEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNP-FVVNGLVDVYRRCGDM 145
G PN+ T+ S L AC LGKE H + ++ S+ +V N L+ +Y RCG M
Sbjct: 240 MTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKM 299
Query: 146 LSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGY 205
A +I + + + V+ N++I GY +N EA E F M G + +S S+I+
Sbjct: 300 PQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIA-- 357
Query: 206 VDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSD 265
A +++L G E+HA I G S+
Sbjct: 358 ----------------------------------ASGRLSNLLAGMELHAYVIKHGWDSN 383
Query: 266 TFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLS 325
VG L++MY + AF + + + + G+ N A++LF ++
Sbjct: 384 LQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAK 443
Query: 326 LDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKH 385
+ D +G IL A S L +M K++H + +R G D I LVD+Y KC ++ +
Sbjct: 444 KRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGY 502
Query: 386 ARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVH 445
A ++ I D+VS +M+++ A++G+ E + FRR++ +G D ++ L LSA
Sbjct: 503 ATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAAS 562
Query: 446 AGSIKTGSEFF--------------------------DLMAYYDV-----KPSLKHYTCM 474
++ G E DL + V + L YT M
Sbjct: 563 LSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSM 622
Query: 475 VDLLSRAGELGEAYEFIKKI---PMAPDSVMWGALLGGCVSHGNLEFGQ---IAADRLIE 528
++ G A E K+ ++PD + + ALL C G L+ G+ + E
Sbjct: 623 INAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYE 682
Query: 529 LEPNNTGNYVMLANLFAYA 547
LEP +YV L ++ A
Sbjct: 683 LEPWPE-HYVCLVDMLGRA 700
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 159/316 (50%), Gaps = 7/316 (2%)
Query: 167 IVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDG 226
++ C ++FD+M R +WN+MI YV N A +++ ++ + +G
Sbjct: 86 VLELCGKRRAVSQEKVFDEMP----DRTAFAWNTMIGAYVSNGEPASALALYWNMRV-EG 140
Query: 227 IEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQ 286
+ +F ++L ACA + +R G E+H+L + LG S F+ ALV MY + DL AA+
Sbjct: 141 VPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAAR 200
Query: 287 MAFDEI-ENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSL 345
FD E + +L + + + ++LF EM P+ YT+ L+AC
Sbjct: 201 RLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGF 260
Query: 346 ATMERGKQVHAYAIRCG-YDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAM 404
+ + GK++HA ++ + S++++ AL+ MY +CG + A ++++ D+V+ N++
Sbjct: 261 SYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSL 320
Query: 405 LTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDV 464
+ Y + KE + F ++A+G + D +S S ++A ++ G E + +
Sbjct: 321 IKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGW 380
Query: 465 KPSLKHYTCMVDLLSR 480
+L+ ++D+ S+
Sbjct: 381 DSNLQVGNTLIDMYSK 396
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 107/432 (24%), Positives = 173/432 (40%), Gaps = 85/432 (19%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC + F M ++D +SW +V+ A N +EALE
Sbjct: 393 MYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALE---------------- 436
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFR-MQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
LFR + + +E + L S+L A + L+ + + KE H +
Sbjct: 437 ---------------------LFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCH 475
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
I R G + + + N LVDVY +C +M A ++F K+ VS ++I NGN +EA
Sbjct: 476 ILRKGLL-DTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEA 534
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
ELF +M + G+ S +L
Sbjct: 535 VELFRRM------------------------------------VETGLSADSVALLCILS 558
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
A A +++L KG+EIH + G + + A+V+MY DL +A+ FD IE L
Sbjct: 559 AAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQ 618
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV----- 354
+ + + A++LF +M +++PD + +L ACS ++ G+
Sbjct: 619 YTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIME 678
Query: 355 HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST-PDLVSQNAMLTAYAMHGH 413
H Y + + V LVDM + + A K + T P A+L A H
Sbjct: 679 HEYELEPWPEHYV----CLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSE 734
Query: 414 GKEGIAHFRRIL 425
+ G +R+L
Sbjct: 735 KEIGEIAAQRLL 746
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 141/342 (41%), Gaps = 79/342 (23%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+YGKC ++ A +VF+ + +D VSW S++++ A NG NE+
Sbjct: 493 VYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNG----------------NES---- 532
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
EA+ + RM GL ++ L +L A A L L+ G+E H Y+
Sbjct: 533 ----------------EAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYL 576
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R GF + +VD+Y CGD+ SA +F + K + ++I Y +G A
Sbjct: 577 LRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAV 636
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFR-------------------DL 221
ELFD+M H V IS+ +++ L DE + D+
Sbjct: 637 ELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDM 696
Query: 222 LMRDG-------------IEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFV 268
L R EPT+ + ++L AC + KEI +A L+ +
Sbjct: 697 LGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSE----KEIGEIAAQRLLELEPKN 752
Query: 269 GGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPN 310
G LV + ++ A Q ++++E + KMK G E +
Sbjct: 753 PGNLVLV----SNVFAEQGRWNDVEKVR---AKMKASGMEKH 787
>gi|357118480|ref|XP_003560982.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Brachypodium distachyon]
Length = 796
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 192/586 (32%), Positives = 309/586 (52%), Gaps = 52/586 (8%)
Query: 28 SVVTACAANGLVLEALECLERMSSLDNE---------TPNLVSWSAVIGGFTQNGYDEEA 78
+V + AA+ V AL L S N+ +P+ V W+ ++ G + + EA
Sbjct: 149 AVASGFAADNFVASALAKLYFTLSRGNDARKVFDAVPSPDTVLWNTLLAGLSGS----EA 204
Query: 79 IGMLFRMQAEG-LEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVD 137
+ RM G + P++ TL+SVLPA A + ++G+ H + + G + VV GL+
Sbjct: 205 LEAFVRMAGAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEHVVTGLIS 264
Query: 138 VYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIIS 197
+Y +CGDM C AR LFD+ME +++
Sbjct: 265 LYAKCGDM----------------EC---------------ARHLFDRME----GPDLVT 289
Query: 198 WNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALA 257
+N++ISGY N + + +F++L+ G+ P+S T +++ + +HA
Sbjct: 290 YNALISGYSINGMVGSSVELFKELVGM-GLRPSSSTLVALIPVHSPFGHEPLAGCLHAHV 348
Query: 258 IALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAM 317
+ GL ++ V AL +YCR+ D+ +A+ AFD + G+ N T A+
Sbjct: 349 VKAGLDANAPVSTALTTLYCRFNDMDSARRAFDAMPEKTMESWNAMISGYAQNGLTEMAV 408
Query: 318 QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMY 377
LF +M +L++ P+ T+ LSAC+ L + GK VH + +V++ TAL+DMY
Sbjct: 409 ALFQQMQALNVRPNPLTISSALSACAQLGALSLGKWVHKIIANEKLELNVYVMTALIDMY 468
Query: 378 AKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFL 437
KCGS+ AR + + ++VS N M++ Y +HG G E + ++ ++ + P +FL
Sbjct: 469 VKCGSIAEARCIFDSMDNKNVVSWNVMISGYGLHGQGAEALKLYKDMMDAHLHPTSSTFL 528
Query: 438 SALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPM 496
S L AC H G +K G+ F M Y + P ++H TCMVDLL RAG+L EA+E I + P
Sbjct: 529 SVLYACSHGGLVKEGTTVFRSMTSDYGITPGIEHCTCMVDLLGRAGQLKEAFELISEFPK 588
Query: 497 -APDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLAR 555
A +WGALLG C+ H + + ++A+ +L ELEP NTG YV+L+NL+ ++S+ A
Sbjct: 589 SAVGPGIWGALLGACMVHKDGDLAKLASQKLFELEPENTGYYVLLSNLYTSKKQYSEAAV 648
Query: 556 TRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
RQ+ K R++ K+PGC+ IE D H F A DR+H +S+ IY ++
Sbjct: 649 VRQEAKSRKLVKTPGCTLIEIGDRPHVFMAGDRAHPQSDAIYLYLE 694
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 173/371 (46%), Gaps = 12/371 (3%)
Query: 146 LSALKIFSKFSIKNEVSCNTIIVGYC-ENGNVAEARELFDQMEHLGVQRGIISWNSMISG 204
L AL + S F+ N V+ + + GN +AR++FD + + WN++++G
Sbjct: 145 LHALAVASGFAADNFVASALAKLYFTLSRGN--DARKVFDAVP----SPDTVLWNTLLAG 198
Query: 205 YVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQS 264
+ EA F + + P S T SVL A A++ + G+ +HA GL
Sbjct: 199 LSGS----EALEAFVRMAGAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQ 254
Query: 265 DTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEML 324
V L+ +Y + D+ A+ FD +E + + G+ N ++++LF E++
Sbjct: 255 HEHVVTGLISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELV 314
Query: 325 SLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLK 384
+ L P T+ ++ S +HA+ ++ G D++ + TAL +Y + +
Sbjct: 315 GMGLRPSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMD 374
Query: 385 HARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACV 444
AR A+ + + S NAM++ YA +G + +A F+++ A RP+ ++ SALSAC
Sbjct: 375 SARRAFDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACA 434
Query: 445 HAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWG 504
G++ G ++A ++ ++ T ++D+ + G + EA + + V W
Sbjct: 435 QLGALSLGKWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNK-NVVSWN 493
Query: 505 ALLGGCVSHGN 515
++ G HG
Sbjct: 494 VMISGYGLHGQ 504
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/387 (24%), Positives = 157/387 (40%), Gaps = 73/387 (18%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KCG ++ A+ +F M D V++N++++ + NG+V ++E
Sbjct: 265 LYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELF-------------- 310
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+E +GM GL P++ TL +++P + L H ++
Sbjct: 311 ---------------KELVGM-------GLRPSSSTLVALIPVHSPFGHEPLAGCLHAHV 348
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G +N V L +Y R DM SA + F K S N +I GY +NG A
Sbjct: 349 VKAGLDANAPVSTALTTLYCRFNDMDSARRAFDAMPEKTMESWNAMISGYAQNGLTEMAV 408
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LF QM+ L V+ P T S L A
Sbjct: 409 ALFQQMQALNVR------------------------------------PNPLTISSALSA 432
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA + +L GK +H + L+ + +V AL++MY + + A+ FD ++N +
Sbjct: 433 CAQLGALSLGKWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSW 492
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV-HAYAI 359
+ G+ + A++L+ +M+ L P T +L ACS ++ G V +
Sbjct: 493 NVMISGYGLHGQGAEALKLYKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFRSMTS 552
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHA 386
G + T +VD+ + G LK A
Sbjct: 553 DYGITPGIEHCTCMVDLLGRAGQLKEA 579
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/383 (24%), Positives = 171/383 (44%), Gaps = 55/383 (14%)
Query: 205 YVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKG-----------KEI 253
++ NSL ++ DLL P SF+F + A S R G + +
Sbjct: 90 FLRNSLLRSLPTLRADLLFPS---PDSFSFAFAATSLASSCS-RGGISPPSAASAALRPL 145
Query: 254 HALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYT 313
HALA+A G +D FV AL ++Y A+ FD + + + +L G +
Sbjct: 146 HALAVASGFAADNFVASALAKLYFTLSRGNDARKVFDAVPSPDTVLWNTLLAGLSGS--- 202
Query: 314 WNAMQLFSEMLSL-DLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTA 372
A++ F M + PD T+ +L A + +A G+ VHA+ +CG H+ T
Sbjct: 203 -EALEAFVRMAGAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEHVVTG 261
Query: 373 LVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPD 432
L+ +YAKCG ++ AR + R+ PDLV+ NA+++ Y+++G + F+ ++ G RP
Sbjct: 262 LISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMGLRPS 321
Query: 433 HISFLS-----------ALSACVHAGSIKTGSE---------------FFDLMA---YYD 463
+ ++ L+ C+HA +K G + F D+ + +D
Sbjct: 322 SSTLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSARRAFD 381
Query: 464 VKP--SLKHYTCMVDLLSRAG--ELGEA-YEFIKKIPMAPDSVMWGALLGGCVSHGNLEF 518
P +++ + M+ ++ G E+ A ++ ++ + + P+ + + L C G L
Sbjct: 382 AMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLGALSL 441
Query: 519 GQIAADRLIELEPNNTGNYVMLA 541
G+ ++I E YVM A
Sbjct: 442 GKW-VHKIIANEKLELNVYVMTA 463
>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Vitis vinifera]
Length = 993
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 193/573 (33%), Positives = 309/573 (53%), Gaps = 43/573 (7%)
Query: 27 NSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQ 86
N+++ A G + EA M D +SW++++ GF QNG EA+ M+
Sbjct: 357 NALIAMYARFGKMGEAANIFYNMDDWDT-----ISWNSMLSGFVQNGLYHEALQFYHEMR 411
Query: 87 AEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDML 146
G +P+ + S++ A AR G + H Y +NG S+ V N LVD+Y
Sbjct: 412 DAGQKPDLVAVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMY------- 464
Query: 147 SALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYV 206
+KF + C +FD+M + ++SW ++I+G+
Sbjct: 465 ------AKFCSMKYMDC------------------IFDKMP----DKDVVSWTTIIAGHA 496
Query: 207 DNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDT 266
N + A +FR++ + +GI+ S+L+AC+ + + KEIH+ I GL SD
Sbjct: 497 QNGSHSRALELFREVQL-EGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGL-SDL 554
Query: 267 FVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSL 326
+ +V++Y ++ A F+ IE + + + N A++LF M
Sbjct: 555 VLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKET 614
Query: 327 DLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHA 386
+ PD ++ ILSA +SL+ +++GK++H + IR G+ + + + LVDMYA+CG+L+ +
Sbjct: 615 GVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKS 674
Query: 387 RLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHA 446
R + I DLV +M+ AY MHG G+ I FRR+ PDHI+F++ L AC H+
Sbjct: 675 RNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHS 734
Query: 447 GSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGA 505
G + G F + M Y Y ++P +HY C+VDLL RA L EAY+F+K + + P + +W A
Sbjct: 735 GLMNEGRRFLESMKYEYQLEPWPEHYVCLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCA 794
Query: 506 LLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRM 565
LLG C H N E G+IAA +L+E++P N GNYV+++N++A RW D+ R +MK +
Sbjct: 795 LLGACQIHSNKELGEIAAQKLLEMDPENPGNYVLVSNVYAAERRWKDVEEVRMRMKASGL 854
Query: 566 HKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYT 598
K+PGCSWIE +++H F A D+SH +S EIY+
Sbjct: 855 KKNPGCSWIEVGNKVHTFMARDKSHPQSYEIYS 887
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 141/535 (26%), Positives = 228/535 (42%), Gaps = 106/535 (19%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKCG L DA+K+F MP + +WN
Sbjct: 159 MYGKCGCLVDAEKLFDGMPHKTIFTWN--------------------------------- 185
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
A+IG + NG ++ + M+ G+ +A T +L AC L+ G E HG
Sbjct: 186 ---AMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRCGAEVHGLA 242
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G++S FV N +V +Y +C D+ NG AR
Sbjct: 243 IKEGYVSIVFVANSIVGMYTKCNDL---------------------------NG----AR 271
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+LFD+M + ++SWNSMIS Y N EA +F ++ + + P ++TF + L A
Sbjct: 272 QLFDRMPE---KEDVVSWNSMISAYSSNGQSIEALRLFGEM-QKASLAPNTYTFVAALQA 327
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C D + +++G IHA + + FV AL+ MY R+ + A F +++ + +
Sbjct: 328 CEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISW 387
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
GF N A+Q + EM PD+ V I++A + G Q+HAYA++
Sbjct: 388 NSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNGMQIHAYAMK 447
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
G DSD+ +G +LVDMYAK S+K+ + ++ D+VS ++ +A +G +
Sbjct: 448 NGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALEL 507
Query: 421 FRRILASGFRPDHISFLSALSAC-----------VHA----------------------- 446
FR + G D + S L AC +H+
Sbjct: 508 FREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGLSDLVLQNGIVDVYGEC 567
Query: 447 GSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSV 501
G++ + F+L+ + DV +C V A E E + +K+ + PDS+
Sbjct: 568 GNVDYAARMFELIEFKDVVSWTSMISCYVH-NGLANEALELFHLMKETGVEPDSI 621
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 106/420 (25%), Positives = 184/420 (43%), Gaps = 39/420 (9%)
Query: 98 SSVLPACARLQKLSLGKEFHGY-ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFS 156
SSVL C + LS G++ H + IT N ++ F+ LV +Y +CG ++ A K+F
Sbjct: 118 SSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMP 177
Query: 157 IKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFS 216
K + N +I Y NG + EL+ +M
Sbjct: 178 HKTIFTWNAMIGAYVTNGEPLGSLELYREMR----------------------------- 208
Query: 217 MFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMY 276
GI + TF +L AC + R G E+H LAI G S FV ++V MY
Sbjct: 209 -------VSGIPLDACTFPCILKACGLLKDRRCGAEVHGLAIKEGYVSIVFVANSIVGMY 261
Query: 277 CRYQDLVAAQMAFDEIENIENLLG-KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTV 335
+ DL A+ FD + E+++ + N + A++LF EM L P+ YT
Sbjct: 262 TKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTF 321
Query: 336 GIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST 395
L AC + +++G +HA ++ Y +V + AL+ MYA+ G + A + +
Sbjct: 322 VAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDD 381
Query: 396 PDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEF 455
D +S N+ML+ + +G E + + + +G +PD ++ +S ++A +G+ G +
Sbjct: 382 WDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNGMQI 441
Query: 456 FDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
+ L+ +VD+ ++ + K+P D V W ++ G +G+
Sbjct: 442 HAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMP-DKDVVSWTTIIAGHAQNGS 500
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 147/323 (45%), Gaps = 37/323 (11%)
Query: 212 DEAFSMFRDLLMRDGIEPTSFT----FGSVLIACADMNSLRKGKEIHALAI-ALGLQSDT 266
+EAF DL P+ F+ + SVL C +L +G+++HA I + L +
Sbjct: 93 NEAFQSLTDLFANQS--PSQFSLDEAYSSVLELCGSKKALSEGQQVHAHMITSNALFNSV 150
Query: 267 FVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAM--------- 317
F+ LV MY + LV A+ FD + + ++TWNAM
Sbjct: 151 FLSTRLVFMYGKCGCLVDAEKLFDGMPH--------------KTIFTWNAMIGAYVTNGE 196
Query: 318 -----QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTA 372
+L+ EM + D T IL AC L G +VH AI+ GY S V + +
Sbjct: 197 PLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRCGAEVHGLAIKEGYVSIVFVANS 256
Query: 373 LVDMYAKCGSLKHARLAYKRI-STPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRP 431
+V MY KC L AR + R+ D+VS N+M++AY+ +G E + F + + P
Sbjct: 257 IVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAP 316
Query: 432 DHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFI 491
+ +F++AL AC + IK G + ++ ++ + +R G++GEA
Sbjct: 317 NTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIF 376
Query: 492 KKIPMAPDSVMWGALLGGCVSHG 514
+ D++ W ++L G V +G
Sbjct: 377 YNMD-DWDTISWNSMLSGFVQNG 398
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 107/229 (46%), Gaps = 36/229 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+YG+CG++D A ++F+++ +D VSW S+++ NGL EALE
Sbjct: 563 VYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALE---------------- 606
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+ M+ G+EP++ +L S+L A A L L GKE HG++
Sbjct: 607 --------------------LFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFL 646
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R GF+ + + LVD+Y RCG + + +F+ K+ V ++I Y +G A
Sbjct: 647 IRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAI 706
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEP 229
+LF +ME + I++ +++ + L +E + +EP
Sbjct: 707 DLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEP 755
>gi|326519098|dbj|BAJ96548.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 624
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 175/515 (33%), Positives = 275/515 (53%), Gaps = 36/515 (6%)
Query: 85 MQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGD 144
+ A L P R + + ACA+ + L ++ H ++ + F + F+ N L+ +Y +C
Sbjct: 42 LDAGELAPTPRVYHTFITACAQSKNLEDARKVHAHLASSRFAGDAFLDNSLIHLYCKC-- 99
Query: 145 MLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISG 204
G+V EAR++FD+M ++ ++SW S+I+G
Sbjct: 100 -----------------------------GSVLEARKVFDEMR----RKDMVSWTSLIAG 126
Query: 205 YVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQS 264
Y N + +EA + +L + +P FTF S+L A G++IHALA+
Sbjct: 127 YAQNDMPEEAIGLLPGML-KGRFKPNGFTFASLLKAAGAHADSGIGRQIHALAVKCDWHE 185
Query: 265 DTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEML 324
D +VG AL++MY R + A FD++++ + GF A+ F+EML
Sbjct: 186 DVYVGSALLDMYARCGMMDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMTFAEML 245
Query: 325 SLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLK 384
+T + S+ + L +E+GK VHA+ I+ G L+DMYAK GS+
Sbjct: 246 RNGFEATHFTYSSVFSSIARLGALEQGKWVHAHMIKSRQKMTAFAGNTLLDMYAKSGSMI 305
Query: 385 HARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACV 444
AR + R+ DLV+ N MLTA+A +G GKE ++HF + SG + ++FL L+AC
Sbjct: 306 DARKVFDRVDDKDLVTWNTMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQVTFLCILTACS 365
Query: 445 HAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWG 504
H G +K G +F++M YD++P + H+ +V LL RAG L A FI K+P+ P + +WG
Sbjct: 366 HGGLVKEGKRYFEMMKEYDLEPEIDHFVTVVALLGRAGLLNFALVFIFKMPIEPTAAVWG 425
Query: 505 ALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRR 564
ALL C H N + GQ AAD + EL+P+++G V+L N++A G+W AR R+ MK
Sbjct: 426 ALLAACRMHKNAKVGQFAADHVFELDPDDSGPPVLLYNIYASTGQWDAAARVRRIMKTTG 485
Query: 565 MHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTI 599
+ K P CSW+E + +H F A+D +H R+EEIY +
Sbjct: 486 VKKEPACSWVEMENSVHMFVANDDTHPRAEEIYKM 520
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 108/416 (25%), Positives = 177/416 (42%), Gaps = 46/416 (11%)
Query: 7 SLDDAKKVFKMMPER----DCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSW 62
+L+DA+KV + D NS++ G VLEA + + M D +VSW
Sbjct: 66 NLEDARKVHAHLASSRFAGDAFLDNSLIHLYCKCGSVLEARKVFDEMRRKD-----MVSW 120
Query: 63 SAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITR 122
+++I G+ QN EEAIG+L M +PN T +S+L A +G++ H +
Sbjct: 121 TSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFTFASLLKAAGAHADSGIGRQIHALAVK 180
Query: 123 NGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAREL 182
+ + +V + L+D+Y RCG M A +F K KN VS N +I G+ G+ A
Sbjct: 181 CDWHEDVYVGSALLDMYARCGMMDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMT 240
Query: 183 FDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACA 242
F +M +R+G E T FT+ SV + A
Sbjct: 241 FAEM------------------------------------LRNGFEATHFTYSSVFSSIA 264
Query: 243 DMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKM 302
+ +L +GK +HA I + F G L++MY + ++ A+ FD +++ + +
Sbjct: 265 RLGALEQGKWVHAHMIKSRQKMTAFAGNTLLDMYAKSGSMIDARKVFDRVDDKDLVTWNT 324
Query: 303 KEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCG 362
F A+ F EM + + T IL+ACS ++ GK+
Sbjct: 325 MLTAFAQYGLGKEAVSHFEEMRKSGIYLNQVTFLCILTACSHGGLVKEGKRYFEMMKEYD 384
Query: 363 YDSDVHIGTALVDMYAKCGSLKHARL-AYKRISTPDLVSQNAMLTAYAMHGHGKEG 417
+ ++ +V + + G L A + +K P A+L A MH + K G
Sbjct: 385 LEPEIDHFVTVVALLGRAGLLNFALVFIFKMPIEPTAAVWGALLAACRMHKNAKVG 440
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 150/303 (49%), Gaps = 3/303 (0%)
Query: 214 AFSMFRDLLMRDGIE--PTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGA 271
A ++ RDL + D E PT + + + ACA +L +++HA + D F+ +
Sbjct: 32 ASAVLRDLDLLDAGELAPTPRVYHTFITACAQSKNLEDARKVHAHLASSRFAGDAFLDNS 91
Query: 272 LVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPD 331
L+ +YC+ ++ A+ FDE+ + + G+ N A+ L ML P+
Sbjct: 92 LIHLYCKCGSVLEARKVFDEMRRKDMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPN 151
Query: 332 IYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYK 391
+T +L A + A G+Q+HA A++C + DV++G+AL+DMYA+CG + A +
Sbjct: 152 GFTFASLLKAAGAHADSGIGRQIHALAVKCDWHEDVYVGSALLDMYARCGMMDMATAVFD 211
Query: 392 RISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKT 451
++ + + VS NA+++ +A G G+ + F +L +GF H ++ S S+ G+++
Sbjct: 212 KLDSKNGVSWNALISGFARKGDGETALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQ 271
Query: 452 GSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCV 511
G M K + ++D+ +++G + +A + ++ D V W +L
Sbjct: 272 GKWVHAHMIKSRQKMTAFAGNTLLDMYAKSGSMIDARKVFDRVD-DKDLVTWNTMLTAFA 330
Query: 512 SHG 514
+G
Sbjct: 331 QYG 333
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 1/116 (0%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K GS+ DA+KVF + ++D V+WN+++TA A GL EA+ E M N V
Sbjct: 297 MYAKSGSMIDARKVFDRVDDKDLVTWNTMLTAFAQYGLGKEAVSHFEEMRK-SGIYLNQV 355
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEF 116
++ ++ + G +E M+ LEP +V+ R L+ F
Sbjct: 356 TFLCILTACSHGGLVKEGKRYFEMMKEYDLEPEIDHFVTVVALLGRAGLLNFALVF 411
>gi|297798624|ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313032|gb|EFH43455.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 997
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 180/542 (33%), Positives = 294/542 (54%), Gaps = 39/542 (7%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARL-QKLSLGKEF 116
+L+SW++VI G Q+ + EA+ + ++ GL+P+ T++SVL A + L + LSL K+
Sbjct: 387 DLISWNSVIAGIAQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAASSLPEGLSLSKQI 446
Query: 117 HGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNV 176
H + + +++ FV L+D Y R M A +F
Sbjct: 447 HVHAIKTNNVADSFVSTALIDAYSRNRCMKEAEVLF------------------------ 482
Query: 177 AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGS 236
R FD +++WN+M+SGY + + +F L+ + G FT +
Sbjct: 483 --GRNNFD----------LVAWNAMMSGYTQSHDGHKTLELFA-LMHKQGERSDDFTLAT 529
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
VL C + ++ +GK++HA AI G D +V +++MY + D+ AAQ AFD I +
Sbjct: 530 VLKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPD 589
Query: 297 NLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHA 356
++ G N A+ +FS+M + + PD +T+ + A S L +E+G+Q+HA
Sbjct: 590 DVAWTTLISGCIENGEEERALHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHA 649
Query: 357 YAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKE 416
A++ SD +GT+LVDMYAKCGS+ A +KRI ++ + NAML A HG GKE
Sbjct: 650 NALKLNCTSDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKE 709
Query: 417 GIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMV 475
+ F+++ + G +PD ++F+ LSAC H+G + ++ M Y +KP ++HY+C+
Sbjct: 710 ALQLFKQMESLGIKPDKVTFIGVLSACSHSGLVSEAYKYIRSMHRDYGIKPEIEHYSCLA 769
Query: 476 DLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTG 535
D L RAG + EA I + M + M+ LL C G+ E G+ A +L+ELEP ++
Sbjct: 770 DALGRAGLVKEAENLIDSMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSS 829
Query: 536 NYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEE 595
YV+L+N++A A +W ++ R MK ++ K PG SWIE +++IH F DRS+ ++E
Sbjct: 830 AYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHLFVVDDRSNPQTEL 889
Query: 596 IY 597
IY
Sbjct: 890 IY 891
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 153/564 (27%), Positives = 246/564 (43%), Gaps = 93/564 (16%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGSL A++VF MPERD VSWNS++ A A +
Sbjct: 90 MYSKCGSLTYARRVFDKMPERDLVSWNSILAAYAQSS----------------------- 126
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNAR-TLSSVLPACARLQKLSLGKEFHGY 119
G +N +EA +LFR+ + + +R TLS +L C + + FHGY
Sbjct: 127 ------EGVVENV--KEAF-LLFRILRQDVVYTSRMTLSPMLKLCLHSGYVCASESFHGY 177
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ G + FV LV++Y + G + +F + ++ V N ++ Y E G EA
Sbjct: 178 ACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKAYLEMGFKEEA 237
Query: 180 RELFDQMEHLGVQRG----------------------------------IISWNSMISGY 205
+L G+ IIS N ++SGY
Sbjct: 238 IDLSSAFHTSGLHPNEITLRLLSRISGDDSEAGQVKSFENGNDASAVSEIISRNKILSGY 297
Query: 206 VDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSD 265
+ Y F D++ D +E TF VL ++SL G+++H +A+ LGL
Sbjct: 298 LHAGQYSALLKCFMDMVESD-LECDQVTFILVLATAVRLDSLALGQQVHCMALKLGLDLM 356
Query: 266 TFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLS 325
V +L+ MYC+ + + A+ F+ + + + G + A+ LF ++L
Sbjct: 357 LTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSDLEVEAVCLFMQLLR 416
Query: 326 LDLTPDIYTVGIILSACSSLAT-MERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLK 384
L PD YT+ +L A SSL + KQ+H +AI+ +D + TAL+D Y++ +K
Sbjct: 417 CGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADSFVSTALIDAYSRNRCMK 476
Query: 385 HARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSAC- 443
A + + R + DLV+ NAM++ Y G + + F + G R D + + L C
Sbjct: 477 EAEVLFGR-NNFDLVAWNAMMSGYTQSHDGHKTLELFALMHKQGERSDDFTLATVLKTCG 535
Query: 444 ----------VHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKK 493
VHA +IK+G YD+ L + ++D+ + G++ A
Sbjct: 536 FLFAINQGKQVHAYAIKSG---------YDL--DLWVSSGILDMYVKCGDMSAAQFAFDS 584
Query: 494 IPMAPDSVMWGALLGGCVSHGNLE 517
IP+ PD V W L+ GC+ +G E
Sbjct: 585 IPV-PDDVAWTTLISGCIENGEEE 607
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 86/410 (20%), Positives = 162/410 (39%), Gaps = 69/410 (16%)
Query: 110 LSLGKEFHGYITRNGFMSNP--FVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTII 167
L LGK H I NP F+VN L+ +Y +CG + A ++F K ++ VS N+I+
Sbjct: 62 LMLGKCTHARIL--ALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPERDLVSWNSIL 119
Query: 168 VGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGI 227
Y ++ G V+N EAF +FR +L +D +
Sbjct: 120 AAYAQSSE----------------------------GVVEN--VKEAFLLFR-ILRQDVV 148
Query: 228 EPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQM 287
+ T +L C + + H A +GL D FV GALV +Y ++ + ++
Sbjct: 149 YTSRMTLSPMLKLCLHSGYVCASESFHGYACKIGLDGDDFVAGALVNIYLKFGKVKEGRV 208
Query: 288 AFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLAT 347
F+E+ + +L + + + A+ L S + L P+ T+ +LS S
Sbjct: 209 LFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHTSGLHPNEITLR-LLSRIS---- 263
Query: 348 MERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTA 407
G DS+ G +K + +++S+N +L+
Sbjct: 264 --------------GDDSEA-------------GQVKSFENGNDASAVSEIISRNKILSG 296
Query: 408 YAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPS 467
Y G + F ++ S D ++F+ L+ V S+ G + + +
Sbjct: 297 YLHAGQYSALLKCFMDMVESDLECDQVTFILVLATAVRLDSLALGQQVHCMALKLGLDLM 356
Query: 468 LKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
L ++++ + ++G A + D + W +++ G ++ +LE
Sbjct: 357 LTVSNSLINMYCKLRKIGLARTVFNNMS-ERDLISWNSVIAG-IAQSDLE 404
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 74/156 (47%), Gaps = 5/156 (3%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGS+DDA +FK + + +WN+++ A +G EAL+ ++M SL + P+ V
Sbjct: 669 MYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKEALQLFKQMESLGIK-PDKV 727
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
++ V+ + +G EA + M + G++P S + A R L KE
Sbjct: 728 TFIGVLSACSHSGLVSEAYKYIRSMHRDYGIKPEIEHYSCLADALGR---AGLVKEAENL 784
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKF 155
I ++ + L+ R GD + ++ +K
Sbjct: 785 IDSMSMEASASMYRTLLAACRVQGDTETGKRVATKL 820
>gi|357129947|ref|XP_003566620.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Brachypodium distachyon]
Length = 902
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 191/605 (31%), Positives = 305/605 (50%), Gaps = 76/605 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
M+ K G++DDAK +F ++ +D V
Sbjct: 345 MHSKFGAIDDAKTLFNLITYKD------------------------------------TV 368
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A++ G T N DEEAI ML M +G+ P+ + ++V+ AC+ ++ GK+ H
Sbjct: 369 SWNALLVGLTHNEEDEEAIHMLKGMNLDGVTPDEVSFATVINACSNIRATETGKQIHCLA 428
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
++ SN V + L+D Y + GD+ S K+ ++ +
Sbjct: 429 MKHSICSNHAVGSSLIDFYSKHGDVESCRKVLAQVDASS--------------------- 467
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
I+ N +I+G V N+ DEA +F+ +L RDG++P+SFTF S+L
Sbjct: 468 --------------IVPRNVLIAGLVQNNREDEAIDLFQQVL-RDGLKPSSFTFSSILSG 512
Query: 241 CADMNSLRKGKEIHALAIALG-LQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
C + S GK++H + G L DT VG +LV Y + + A E+ + +NL+
Sbjct: 513 CTGLLSSIIGKQVHCYTLKSGFLNDDTSVGVSLVGTYLKARMPEDANKLLIEMPDHKNLV 572
Query: 300 G-KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYA 358
G+ N Y++ ++ F M S D+ PD T IL ACS + + GK++H
Sbjct: 573 EWTAIVSGYAQNGYSYQSLLSFWRMRSYDVHPDEVTFASILKACSEMTALSDGKEIHGLI 632
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRI-STPDLVSQNAMLTAYAMHGHGKEG 417
I+ G+ S +A++DMY+KCG + + A+K + S D+ N+M+ +A +G+ E
Sbjct: 633 IKSGFGSYKTATSAIIDMYSKCGDIISSFEAFKELKSKQDITLWNSMILGFAKNGYADEA 692
Query: 418 IAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVD 476
+ F+++ S + D ++FL L AC HAG I G +FD M+ Y + P + HY C +D
Sbjct: 693 LLLFQKMQDSQIKSDEVTFLGVLIACAHAGLISEGRHYFDSMSKVYGIMPRVDHYACFID 752
Query: 477 LLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGN 536
LL R G L EA E I ++P PD V+W L C H + E G+IAA L+ELEP N+
Sbjct: 753 LLGRGGHLQEAQEVINELPFRPDGVIWATYLAACRMHKDEERGEIAAKELVELEPQNSST 812
Query: 537 YVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEI 596
YV+L+N++A AG W + R+ M+++ K PGCSWI ++ F D++H + I
Sbjct: 813 YVLLSNMYAAAGNWVEAKMAREAMREKGATKFPGCSWITVGNKTSLFLVQDKNHLGALRI 872
Query: 597 YTIID 601
Y ++D
Sbjct: 873 YEMLD 877
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 148/613 (24%), Positives = 268/613 (43%), Gaps = 99/613 (16%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTA---------------------------- 32
MY +CG + DA++VF + D V W S+++
Sbjct: 75 MYARCGRVGDARRVFGGISLPDTVCWASMISGYHRAGRFQEAVCLFTRMEKMGSSPDRVT 134
Query: 33 CAANGLVLEALECLERMSSLDNETP---NLVSWSAVIGGFTQ-NGYDEEAIGMLFRMQAE 88
C A L AL LE +L + P + V+W+AVI G+ Q +G + E G+ M+
Sbjct: 135 CVAVVCALTALGRLEDARTLLHRMPAPSSTVAWNAVISGYAQQSGIEHEVFGLYKDMRCW 194
Query: 89 GLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSA 148
GL P T +S+L A A G++ H R+G +N FV + L+++Y +CG + A
Sbjct: 195 GLWPTRSTFASMLSAAANATAFIEGRQVHAAAVRHGLDANVFVGSSLINLYAKCGCIGDA 254
Query: 149 LKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSM------- 201
+ +F KN V N ++ G N EA ++F M+ LG++ ++ S+
Sbjct: 255 ILVFDCSGEKNVVMWNAMLNGLVRNEYQVEAIQMFLYMKRLGLEADEFTYVSVLGACAHL 314
Query: 202 -------------ISGYVDNSLY---------------DEAFSMFRDLLMRD-------- 225
I +D SL+ D+A ++F + +D
Sbjct: 315 DSHCLGRQVQCVTIKNCMDASLFVANATLDMHSKFGAIDDAKTLFNLITYKDTVSWNALL 374
Query: 226 ----------------------GIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQ 263
G+ P +F +V+ AC+++ + GK+IH LA+ +
Sbjct: 375 VGLTHNEEDEEAIHMLKGMNLDGVTPDEVSFATVINACSNIRATETGKQIHCLAMKHSIC 434
Query: 264 SDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEM 323
S+ VG +L++ Y ++ D+ + + +++ + + G N A+ LF ++
Sbjct: 435 SNHAVGSSLIDFYSKHGDVESCRKVLAQVDASSIVPRNVLIAGLVQNNREDEAIDLFQQV 494
Query: 324 LSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGY-DSDVHIGTALVDMYAKCGS 382
L L P +T ILS C+ L + GKQVH Y ++ G+ + D +G +LV Y K
Sbjct: 495 LRDGLKPSSFTFSSILSGCTGLLSSIIGKQVHCYTLKSGFLNDDTSVGVSLVGTYLKARM 554
Query: 383 LKHA-RLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALS 441
+ A +L + +LV A+++ YA +G+ + + F R+ + PD ++F S L
Sbjct: 555 PEDANKLLIEMPDHKNLVEWTAIVSGYAQNGYSYQSLLSFWRMRSYDVHPDEVTFASILK 614
Query: 442 ACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSV 501
AC ++ G E L+ + ++D+ S+ G++ ++E K++ D
Sbjct: 615 ACSEMTALSDGKEIHGLIIKSGFGSYKTATSAIIDMYSKCGDIISSFEAFKELKSKQDIT 674
Query: 502 MWGALLGGCVSHG 514
+W +++ G +G
Sbjct: 675 LWNSMILGFAKNG 687
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 120/455 (26%), Positives = 216/455 (47%), Gaps = 37/455 (8%)
Query: 89 GLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSA 148
G+ P+ L++ L AC+RL L GK+ H + G S F LV++Y RCG + A
Sbjct: 26 GVRPDQFDLAATLSACSRLGALVSGKQAHCDAEKRGLGSGAFCAAALVNMYARCGRVGDA 85
Query: 149 LKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLG------------------ 190
++F S+ + V ++I GY G EA LF +ME +G
Sbjct: 86 RRVFGGISLPDTVCWASMISGYHRAGRFQEAVCLFTRMEKMGSSPDRVTCVAVVCALTAL 145
Query: 191 --------------VQRGIISWNSMISGYVDNS-LYDEAFSMFRDLLMRDGIEPTSFTFG 235
++WN++ISGY S + E F +++D+ G+ PT TF
Sbjct: 146 GRLEDARTLLHRMPAPSSTVAWNAVISGYAQQSGIEHEVFGLYKDMRCW-GLWPTRSTFA 204
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
S+L A A+ + +G+++HA A+ GL ++ FVG +L+ +Y + + A + FD
Sbjct: 205 SMLSAAANATAFIEGRQVHAAAVRHGLDANVFVGSSLINLYAKCGCIGDAILVFDCSGEK 264
Query: 296 ENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVH 355
++ +G N Y A+Q+F M L L D +T +L AC+ L + G+QV
Sbjct: 265 NVVMWNAMLNGLVRNEYQVEAIQMFLYMKRLGLEADEFTYVSVLGACAHLDSHCLGRQVQ 324
Query: 356 AYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGK 415
I+ D+ + + A +DM++K G++ A+ + I+ D VS NA+L + +
Sbjct: 325 CVTIKNCMDASLFVANATLDMHSKFGAIDDAKTLFNLITYKDTVSWNALLVGLTHNEEDE 384
Query: 416 EGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMV 475
E I + + G PD +SF + ++AC + + +TG + L + + + + ++
Sbjct: 385 EAIHMLKGMNLDGVTPDEVSFATVINACSNIRATETGKQIHCLAMKHSICSNHAVGSSLI 444
Query: 476 DLLSRAGELGEAYEFIKKI---PMAPDSVMWGALL 507
D S+ G++ + + ++ + P +V+ L+
Sbjct: 445 DFYSKHGDVESCRKVLAQVDASSIVPRNVLIAGLV 479
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 142/365 (38%), Gaps = 69/365 (18%)
Query: 213 EAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGAL 272
+AF R G+ P F + L AC+ + +L GK+ H A GL S F AL
Sbjct: 13 DAFVRARRCSAGGGVRPDQFDLAATLSACSRLGALVSGKQAHCDAEKRGLGSGAFCAAAL 72
Query: 273 VEMYCRYQDLVAAQMAFDEI---------------------ENIENLLGKMKEDGFEPNV 311
V MY R + A+ F I + L +M++ G P+
Sbjct: 73 VNMYARCGRVGDARRVFGGISLPDTVCWASMISGYHRAGRFQEAVCLFTRMEKMGSSPDR 132
Query: 312 YT--------------------------------WNAM---------------QLFSEML 324
T WNA+ L+ +M
Sbjct: 133 VTCVAVVCALTALGRLEDARTLLHRMPAPSSTVAWNAVISGYAQQSGIEHEVFGLYKDMR 192
Query: 325 SLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLK 384
L P T +LSA ++ G+QVHA A+R G D++V +G++L+++YAKCG +
Sbjct: 193 CWGLWPTRSTFASMLSAAANATAFIEGRQVHAAAVRHGLDANVFVGSSLINLYAKCGCIG 252
Query: 385 HARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACV 444
A L + ++V NAML + + E I F + G D +++S L AC
Sbjct: 253 DAILVFDCSGEKNVVMWNAMLNGLVRNEYQVEAIQMFLYMKRLGLEADEFTYVSVLGACA 312
Query: 445 HAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWG 504
H S G + + + SL +D+ S+ G + +A I D+V W
Sbjct: 313 HLDSHCLGRQVQCVTIKNCMDASLFVANATLDMHSKFGAIDDAKTLFNLITY-KDTVSWN 371
Query: 505 ALLGG 509
ALL G
Sbjct: 372 ALLVG 376
>gi|356499129|ref|XP_003518395.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Glycine max]
Length = 614
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 183/549 (33%), Positives = 295/549 (53%), Gaps = 39/549 (7%)
Query: 57 PNLVSWSAVIGGFTQNGYDEE-AIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKE 115
PN +++ +I T ++ A+ + RM + L P+ T +CA L LS
Sbjct: 84 PNDYAFNIMIRALTTTWHNYPLALSLFHRMMSLSLTPDNFTFPFFFLSCANLASLSHACA 143
Query: 116 FHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGN 175
H + + S+P + L+ Y RCG
Sbjct: 144 AHSLLFKLALHSDPHTAHSLITAYARCG-------------------------------L 172
Query: 176 VAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFG 235
VA AR++FD++ H R +SWNSMI+GY EA +FR++ RDG EP +
Sbjct: 173 VASARKVFDEIPH----RDSVSWNSMIAGYAKAGCAREAVEVFREMGRRDGFEPDEMSLV 228
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
S+L AC ++ L G+ + + G+ ++++G AL+ MY + +L +A+ FD +
Sbjct: 229 SLLGACGELGDLELGRWVEGFVVERGMTLNSYIGSALISMYAKCGELESARRIFDGMAAR 288
Query: 296 ENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVH 355
+ + G+ N A+ LF M +T + T+ +LSAC+++ ++ GKQ+
Sbjct: 289 DVITWNAVISGYAQNGMADEAILLFHGMKEDCVTANKITLTAVLSACATIGALDLGKQID 348
Query: 356 AYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGK 415
YA + G+ D+ + TAL+DMYAK GSL +A+ +K + + S NAM++A A HG K
Sbjct: 349 EYASQRGFQHDIFVATALIDMYAKSGSLDNAQRVFKDMPQKNEASWNAMISALAAHGKAK 408
Query: 416 EGIAHFRRIL--ASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYT 472
E ++ F+ + G RP+ I+F+ LSACVHAG + G FD+M+ + + P ++HY+
Sbjct: 409 EALSLFQHMSDEGGGARPNDITFVGLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYS 468
Query: 473 CMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPN 532
CMVDLL+RAG L EA++ I+K+P PD V GALLG C S N++ G+ ++E++P+
Sbjct: 469 CMVDLLARAGHLYEAWDLIRKMPEKPDKVTLGALLGACRSKKNVDIGERVMRMILEVDPS 528
Query: 533 NTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDR 592
N+GNY++ + ++A W D AR R M+ + + K+PGCSWIE + +H+F A D
Sbjct: 529 NSGNYIISSKIYANLNMWEDSARMRLLMRQKGITKTPGCSWIEVENHLHEFHAGDGLCLD 588
Query: 593 SEEIYTIID 601
S ++ IID
Sbjct: 589 SIDLSNIID 597
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 107/410 (26%), Positives = 163/410 (39%), Gaps = 75/410 (18%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y +CG + A+KVF +P RD VSWNS++ A G EA+E M D
Sbjct: 167 YARCGLVASARKVFDEIPHRDSVSWNSMIAGYAKAGCAREAVEVFREMGRRD-------- 218
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
G EP+ +L S+L AC L L LG+ G++
Sbjct: 219 ---------------------------GFEPDEMSLVSLLGACGELGDLELGRWVEGFVV 251
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
G N ++ + L+ +Y +CG++ SA +IF + ++ ++ N +I GY +NG EA
Sbjct: 252 ERGMTLNSYIGSALISMYAKCGELESARRIFDGMAARDVITWNAVISGYAQNGMADEAIL 311
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
LF M+ D + T +VL AC
Sbjct: 312 LFHGMK------------------------------------EDCVTANKITLTAVLSAC 335
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK 301
A + +L GK+I A G Q D FV AL++MY + L AQ F ++
Sbjct: 336 ATIGALDLGKQIDEYASQRGFQHDIFVATALIDMYAKSGSLDNAQRVFKDMPQKNEASWN 395
Query: 302 MKEDGFEPNVYTWNAMQLFSEMLSL--DLTPDIYTVGIILSACSSLATMERGKQVH-AYA 358
+ A+ LF M P+ T +LSAC ++ G ++ +
Sbjct: 396 AMISALAAHGKAKEALSLFQHMSDEGGGARPNDITFVGLLSACVHAGLVDEGYRLFDMMS 455
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHA-RLAYKRISTPDLVSQNAMLTA 407
G + + +VD+ A+ G L A L K PD V+ A+L A
Sbjct: 456 TLFGLVPKIEHYSCMVDLLARAGHLYEAWDLIRKMPEKPDKVTLGALLGA 505
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 108/231 (46%), Gaps = 38/231 (16%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG L+ A+++F M RD ++
Sbjct: 268 MYAKCGELESARRIFDGMAARD------------------------------------VI 291
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+AVI G+ QNG +EAI + M+ + + N TL++VL ACA + L LGK+ Y
Sbjct: 292 TWNAVISGYAQNGMADEAILLFHGMKEDCVTANKITLTAVLSACATIGALDLGKQIDEYA 351
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
++ GF + FV L+D+Y + G + +A ++F KNE S N +I +G EA
Sbjct: 352 SQRGFQHDIFVATALIDMYAKSGSLDNAQRVFKDMPQKNEASWNAMISALAAHGKAKEAL 411
Query: 181 ELFDQM--EHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEP 229
LF M E G + I++ ++S V L DE + +F + G+ P
Sbjct: 412 SLFQHMSDEGGGARPNDITFVGLLSACVHAGLVDEGYRLFDMMSTLFGLVP 462
>gi|326509211|dbj|BAJ91522.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 878
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 198/619 (31%), Positives = 312/619 (50%), Gaps = 63/619 (10%)
Query: 4 KCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSS-LDNETPNLVSW 62
K G LD+ ++ F +N++++ A GLV +A ++ ++V+W
Sbjct: 200 KRGFLDEGRERFP---------FNALLSMYARLGLVDDAQSLFRTTAAAFSPGGGDVVTW 250
Query: 63 SAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITR 122
+ +I Q G EA+ +L+ M + G+ P+ T +S LPAC+RL+ L+LG+E H + +
Sbjct: 251 NTMISLLVQGGRCAEAVEVLYDMVSLGVRPDGVTFASALPACSRLEMLALGREMHAVVLK 310
Query: 123 NG-FMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
+ +N FV + LVD+Y N VA AR
Sbjct: 311 DADLAANSFVASALVDMY-------------------------------AGNEKVASARR 339
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
+FD + Q G+ WN+MI GY + +EA +F + G P+ T VL AC
Sbjct: 340 VFDMVPEPSRQLGM--WNAMICGYAQAGMDEEALELFSRMEAEAGCAPSETTMSGVLPAC 397
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK 301
A + +H + G+ + FV AL++MY R ++ A+ F I+ + +
Sbjct: 398 ARSEGFAGKEAMHGYVVKRGMAGNRFVQNALMDMYARLGEMDVARRIFAMIDPRDVVSWN 457
Query: 302 MKEDGFEPNVYTWNAMQLFSEML----------------SLDLTPDIYTVGIILSACSSL 345
G + A QL +EM + P+ T+ +L C++L
Sbjct: 458 TLITGCVVQGHAAEAFQLVTEMQLPSPSPSSSSTTEEGEAHRCMPNNITLMTLLPGCAAL 517
Query: 346 ATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAML 405
A RGK++H YA+R +SD+ +G+ALVDMYAKCG L +R + R+ ++++ N ++
Sbjct: 518 AAPARGKEIHGYAVRHALESDIAVGSALVDMYAKCGCLAASRAVFDRLPRRNVITWNVLI 577
Query: 406 TAYAMHGHGKEGIAHFRRILASG-FRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YD 463
AY MHG G E +A F + A G P+ ++F++AL+AC H+G + G E F M +
Sbjct: 578 MAYGMHGLGDEAVALFDEMAAGGEATPNEVTFIAALAACSHSGLVDRGLELFHGMERDHG 637
Query: 464 VKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSV-MWGALLGGCVSHGNLEFGQIA 522
VKP+ + C+VD+L RAG L EAY I + V W +LLG C H N+E G++A
Sbjct: 638 VKPTPDLHACVVDVLGRAGRLDEAYSIITSMEPGEQQVSAWSSLLGACRLHRNVELGEVA 697
Query: 523 ADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHK 582
A+RL ELEP +YV+L N+++ AG W R +M+ + + K PGCSWIE IH+
Sbjct: 698 AERLFELEPGEASHYVLLCNIYSAAGMWDKSVAVRVRMRRQGVAKEPGCSWIELDGAIHR 757
Query: 583 FRASDRSHDRSEEIYTIID 601
F A + SH S E++ +D
Sbjct: 758 FMAGESSHPASAEVHAHMD 776
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 112/231 (48%), Gaps = 21/231 (9%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY + G +D A+++F M+ RD VSWN+++T C G EA + + M L
Sbjct: 431 MYARLGEMDVARRIFAMIDPRDVVSWNTLITGCVVQGHAAEAFQLVTEM--------QLP 482
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
S S T+ G +A PN TL ++LP CA L + GKE HGY
Sbjct: 483 SPSPSSSSTTEEG------------EAHRCMPNNITLMTLLPGCAALAAPARGKEIHGYA 530
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R+ S+ V + LVD+Y +CG + ++ +F + +N ++ N +I+ Y +G EA
Sbjct: 531 VRHALESDIAVGSALVDMYAKCGCLAASRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAV 590
Query: 181 ELFDQMEHLG-VQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPT 230
LFD+M G +++ + ++ + L D +F + G++PT
Sbjct: 591 ALFDEMAAGGEATPNEVTFIAALAACSHSGLVDRGLELFHGMERDHGVKPT 641
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 102/357 (28%), Positives = 155/357 (43%), Gaps = 53/357 (14%)
Query: 193 RGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADM---NSLRK 249
R +S+NS+IS ++ A RD+L + +SFT SVL+AC+ + + R
Sbjct: 131 RDAVSYNSLISALCLFRQWERALDALRDMLAEGRHDVSSFTLVSVLLACSHLPGDDGRRL 190
Query: 250 GKEIHALAIALGL---QSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDG 306
G+E HA A+ G + F AL+ MY R + AQ F +
Sbjct: 191 GREAHAFALKRGFLDEGRERFPFNALLSMYARLGLVDDAQSLF-----------RTTAAA 239
Query: 307 FEP---NVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSSLATME 349
F P +V TWN M ++ +M+SL + PD T L ACS L +
Sbjct: 240 FSPGGGDVVTWNTMISLLVQGGRCAEAVEVLYDMVSLGVRPDGVTFASALPACSRLEMLA 299
Query: 350 RGKQVHAYAIRCGYDSDV----HIGTALVDMYAKCGSLKHARLAYKRISTP--DLVSQNA 403
G+++HA ++ D+D+ + +ALVDMYA + AR + + P L NA
Sbjct: 300 LGREMHAVVLK---DADLAANSFVASALVDMYAGNEKVASARRVFDMVPEPSRQLGMWNA 356
Query: 404 MLTAYAMHGHGKEGIAHFRRILA-SGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYY 462
M+ YA G +E + F R+ A +G P + L AC + G + M Y
Sbjct: 357 MICGYAQAGMDEEALELFSRMEAEAGCAPSETTMSGVLPACARS----EGFAGKEAMHGY 412
Query: 463 DVKPSLKH----YTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
VK + ++D+ +R GE+ A I D V W L+ GCV G+
Sbjct: 413 VVKRGMAGNRFVQNALMDMYARLGEMDVARRIFAMID-PRDVVSWNTLITGCVVQGH 468
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 79/191 (41%), Gaps = 42/191 (21%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG L ++ VF +P R+ ++WN ++ A +GL EA+ + M++ TPN V
Sbjct: 548 MYAKCGCLAASRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAVALFDEMAAGGEATPNEV 607
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
++ A + + +G + + + FHG
Sbjct: 608 TFIAALAACSHSGLVDRGLEL----------------------------------FHGME 633
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSI-KNEVSCNTIIVGYC------EN 173
+G P + +VDV R G + A I + + +VS + ++G C E
Sbjct: 634 RDHGVKPTPDLHACVVDVLGRAGRLDEAYSIITSMEPGEQQVSAWSSLLGACRLHRNVEL 693
Query: 174 GNVAEARELFD 184
G VA R LF+
Sbjct: 694 GEVAAER-LFE 703
>gi|297848224|ref|XP_002891993.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
lyrata]
gi|297337835|gb|EFH68252.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
lyrata]
Length = 950
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 182/594 (30%), Positives = 312/594 (52%), Gaps = 59/594 (9%)
Query: 10 DAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGF 69
+A+++F MPER+ VSWN +V+ N ++ EA E M N+VSW+A++ G+
Sbjct: 66 EARQMFDEMPERNIVSWNGLVSGYIKNRMIEEARNVFEIMPER-----NVVSWTAMVKGY 120
Query: 70 TQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNP 129
Q G EA + +RM ++S F G I
Sbjct: 121 VQEGMVVEAELLFWRMPER-------------------NEVSWTVMFGGLID-------- 153
Query: 130 FVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHL 189
G +D R+ DM+ K+ V+ +I G C G V EARE+FD+M
Sbjct: 154 ---GGRIDDARKLYDMMPG---------KDVVASTNMIGGLCREGRVDEAREIFDEMR-- 199
Query: 190 GVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRK 249
+R +I+W +MI+GY N D A +F + + + TS G L + +
Sbjct: 200 --ERNVITWTTMITGYGQNKRVDVARKLFEVMPEKTEVSWTSMLLGYTL--SGRIEDAEE 255
Query: 250 GKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEP 309
E+ + + + G + E +V A+ FD++E+ +N + +E
Sbjct: 256 FFEVMPMKPVIACNAMIVALGEVGE-------IVKARRVFDQMEDRDNATWRGMIKAYER 308
Query: 310 NVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHI 369
+ A++LF++M + P ++ ILS C++LA+++ G+QVHA+ +RC +D DV++
Sbjct: 309 KGFELEALELFAQMQRQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDGDVYV 368
Query: 370 GTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGF 429
+ L+ MY KCG L A+L + R + D++ N++++ YA HG G+E + F + SG
Sbjct: 369 ASVLMTMYVKCGELVKAKLVFDRFPSKDIIMWNSIISGYASHGLGEEALKVFHEMPLSGT 428
Query: 430 RPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMVDLLSRAGELGEAY 488
P+ ++ ++ L+AC + G ++ G E F+ M + + V P+++HY+C VD+L RAG++ +A
Sbjct: 429 MPNKVTLIAILTACSYGGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGKVDKAM 488
Query: 489 EFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAG 548
E I + + PD+ +WGALLG C +H L+ ++AA +L E+EP N G Y++L+++ A
Sbjct: 489 ELINSMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFEIEPENAGPYILLSSINASRS 548
Query: 549 RWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKF-RASDRSHDRSEEIYTIID 601
+W D+A R+ M+ + + K PGCSWIE ++H F R R+H I +++
Sbjct: 549 KWGDVAEMRKNMRTKNVSKFPGCSWIEVGKKVHMFTRGGIRNHPEQAMILMMLE 602
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 112/439 (25%), Positives = 192/439 (43%), Gaps = 43/439 (9%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y K +++A+ VF++MPER+ VSW ++V G+V+EA RM N VS
Sbjct: 89 YIKNRMIEEARNVFEIMPERNVVSWTAMVKGYVQEGMVVEAELLFWRMPER-----NEVS 143
Query: 62 WSAVIGGFTQNGYDEEA------------------IGMLFR---------MQAEGLEPNA 94
W+ + GG G ++A IG L R + E E N
Sbjct: 144 WTVMFGGLIDGGRIDDARKLYDMMPGKDVVASTNMIGGLCREGRVDEAREIFDEMRERNV 203
Query: 95 RTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSK 154
T ++++ + +++ + ++ + +S ++ G Y G + A + F
Sbjct: 204 ITWTTMITGYGQNKRVDVARKLFEVMPEKTEVSWTSMLLG----YTLSGRIEDAEEFFEV 259
Query: 155 FSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEA 214
+K ++CN +IV E G + +AR +FDQME R +W MI Y EA
Sbjct: 260 MPMKPVIACNAMIVALGEVGEIVKARRVFDQME----DRDNATWRGMIKAYERKGFELEA 315
Query: 215 FSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVE 274
+F + R G+ P+ + S+L CA + SL+ G+++HA + D +V L+
Sbjct: 316 LELFAQ-MQRQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDGDVYVASVLMT 374
Query: 275 MYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYT 334
MY + +LV A++ FD + + ++ G+ + A+++F EM P+ T
Sbjct: 375 MYVKCGELVKAKLVFDRFPSKDIIMWNSIISGYASHGLGEEALKVFHEMPLSGTMPNKVT 434
Query: 335 VGIILSACSSLATMERGKQV-HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHA-RLAYKR 392
+ IL+ACS +E G ++ + + V + VDM + G + A L
Sbjct: 435 LIAILTACSYGGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGKVDKAMELINSM 494
Query: 393 ISTPDLVSQNAMLTAYAMH 411
PD A+L A H
Sbjct: 495 TIKPDATVWGALLGACKTH 513
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 58/122 (47%), Gaps = 2/122 (1%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG L AK VF P +D + WNS+++ A++GL EAL+ M L PN V
Sbjct: 375 MYVKCGELVKAKLVFDRFPSKDIIMWNSIISGYASHGLGEEALKVFHEM-PLSGTMPNKV 433
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
+ A++ + G EE + + M+++ + P S + R K+ E
Sbjct: 434 TLIAILTACSYGGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGKVDKAMELINS 493
Query: 120 IT 121
+T
Sbjct: 494 MT 495
>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 741
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 188/565 (33%), Positives = 301/565 (53%), Gaps = 38/565 (6%)
Query: 55 ETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGK 114
+ PNL+ W+ + G + A+ + M + GL PN+ T +L +CA+ + G+
Sbjct: 95 QEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQ 154
Query: 115 EFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
+ HG++ + G+ + FV L+ VY + G + A K+F + ++ VS +I GY G
Sbjct: 155 QIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRG 214
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTF 234
+ A++LFD++ + ++SWN+MISGY + Y EA +F+++ M+ I P T
Sbjct: 215 YIESAQKLFDEIP----VKDVVSWNAMISGYAETGNYKEALELFKEM-MKTNIRPDESTM 269
Query: 235 GSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIEN 294
+V+ ACA S+ G+++H+ G S+ + +L+++Y + +L A F
Sbjct: 270 VTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLF----- 324
Query: 295 IENLLGKMKEDGFEPNVYTWN--------------AMQLFSEMLSLDLTPDIYTVGIILS 340
E LL K +V +WN A+ LF EML P+ T+ IL
Sbjct: 325 -EGLLYK--------DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILP 375
Query: 341 ACSSLATMERGKQVHAYA---IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPD 397
AC+ L ++ G+ +H Y ++ ++ + T+L+DMYAKCG ++ A + I
Sbjct: 376 ACAHLGAIDIGRWIHVYIDKRLKSATNAS-SLRTSLIDMYAKCGDIEAAHQVFNSILHKS 434
Query: 398 LVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFD 457
L S NAM+ +AMHG F R+ G PD I+F+ LSAC +G + G F
Sbjct: 435 LSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIEPDDITFVGLLSACSRSGMLDLGRHIFR 494
Query: 458 LMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNL 516
M Y + P L+HY CM+DLL +G EA E I + M PD V+W +LL C GN+
Sbjct: 495 TMTQDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINNMEMEPDGVIWCSLLKACKIRGNV 554
Query: 517 EFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIED 576
E G+ A LI++EP N G YV+L+N++A AGRW+++A+ R + D+ M K PGCS IE
Sbjct: 555 ELGESFAQNLIKIEPENPGCYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEI 614
Query: 577 RDEIHKFRASDRSHDRSEEIYTIID 601
+H+F D+ H R+ EIY +++
Sbjct: 615 DSVVHEFIIGDKFHPRNREIYGMLE 639
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 150/595 (25%), Positives = 247/595 (41%), Gaps = 142/595 (23%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETP--N 58
+Y + G L+DA+KVF P RD VS+ +++ A+ G + E L +E P +
Sbjct: 178 VYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRGYI-------ESAQKLFDEIPVKD 230
Query: 59 LVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHG 118
+VSW+A+I G+ + G +EA+ + M + P+ T+ +V+ ACA+ + LG++ H
Sbjct: 231 VVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSACAQSGSIELGRQVHS 290
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
+I +GF SN +VN L+D+Y +CG++ +A +F K+ +S NT+I GY
Sbjct: 291 WIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYKDVISWNTLIGGYT------- 343
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
H+ +LY EA +F+++L R G P T S+L
Sbjct: 344 ---------HM-------------------NLYKEALLLFQEML-RSGERPNDVTMLSIL 374
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGG---ALVEMYCRYQDLVAAQMAFDEIENI 295
ACA + ++ G+ IH + I L+S T +L++MY + D+ AA F+ I
Sbjct: 375 PACAHLGAIDIGRWIH-VYIDKRLKSATNASSLRTSLIDMYAKCGDIEAAHQVFNSI--- 430
Query: 296 ENLLGKMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSA 341
++ +WNAM +FS M + + PD T +LSA
Sbjct: 431 -----------LHKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIEPDDITFVGLLSA 479
Query: 342 CSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQ 401
CS ++ G+ HI + Y TP L
Sbjct: 480 CSRSGMLDLGR---------------HIFRTMTQDYK---------------ITPKLEHY 509
Query: 402 NAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFF-DLMA 460
M+ G KE + PD + + S L AC G+++ G F +L+
Sbjct: 510 GCMIDLLGHSGLFKEAEEMINNM---EMEPDGVIWCSLLKACKIRGNVELGESFAQNLIK 566
Query: 461 YYDVKPSLKHYTCMVDLLSRAGELGEAYEF--------IKKIPMAPDSVMWGALLGGCVS 512
P Y + ++ + AG E + +KK+P GC S
Sbjct: 567 IEPENPGC--YVLLSNIYATAGRWNEVAKIRALLNDKGMKKVP-------------GCSS 611
Query: 513 HGNLEFGQIAADRLI--ELEPNNTGNYVMLAN---LFAYAGRWSDLARTRQKMKD 562
+E + + +I + P N Y ML L AG D + Q+M++
Sbjct: 612 ---IEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEE 663
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 39/191 (20%), Positives = 82/191 (42%), Gaps = 4/191 (2%)
Query: 339 LSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDM---YAKCGSLKHARLAYKRIST 395
LS + T++ + +HA I+ G + + + L+++ L +A ++ I
Sbjct: 37 LSLLHNCKTLQSLRLIHAQMIKTGLHNTNYALSKLLELCVISPHFDGLPYAISVFETIQE 96
Query: 396 PDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEF 455
P+L+ N M +A+ + + +++ G P+ +F L +C + + K G +
Sbjct: 97 PNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQI 156
Query: 456 FDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
+ L +T ++ + + G L +A + + P D V + AL+ G S G
Sbjct: 157 HGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHR-DVVSYTALIKGYASRGY 215
Query: 516 LEFGQIAADRL 526
+E Q D +
Sbjct: 216 IESAQKLFDEI 226
>gi|218526158|sp|Q9M1V3.2|PP296_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g63370
Length = 960
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 195/572 (34%), Positives = 307/572 (53%), Gaps = 43/572 (7%)
Query: 27 NSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQ 86
N+++ G + +A L +M++ D +V+W+++I G+ QN +EA+ M
Sbjct: 324 NALIAMYTRCGKMPQAERILRQMNNAD-----VVTWNSLIKGYVQNLMYKEALEFFSDMI 378
Query: 87 AEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDML 146
A G + + +++S++ A RL L G E H Y+ ++G+ SN V N L+D+Y +C
Sbjct: 379 AAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTC 438
Query: 147 SALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYV 206
+ F + K+ +ISW ++I+GY
Sbjct: 439 YMGRAFLRMHDKD-----------------------------------LISWTTVIAGYA 463
Query: 207 DNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDT 266
N + EA +FRD+ + +E GS+L A + + S+ KEIH + GL DT
Sbjct: 464 QNDCHVEALELFRDV-AKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLL-DT 521
Query: 267 FVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSL 326
+ LV++Y + +++ A F+ I+ + + N A++LF M+
Sbjct: 522 VIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVET 581
Query: 327 DLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHA 386
L+ D + ILSA +SL+ + +G+++H Y +R G+ + I A+VDMYA CG L+ A
Sbjct: 582 GLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSA 641
Query: 387 RLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHA 446
+ + RI L+ +M+ AY MHG GK + F ++ PDHISFL+ L AC HA
Sbjct: 642 KAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHA 701
Query: 447 GSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGA 505
G + G F +M + Y+++P +HY C+VD+L RA + EA+EF+K + P + +W A
Sbjct: 702 GLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCA 761
Query: 506 LLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRM 565
LL C SH E G+IAA RL+ELEP N GN V+++N+FA GRW+D+ + R KMK M
Sbjct: 762 LLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGM 821
Query: 566 HKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
K PGCSWIE ++HKF A D+SH S+EIY
Sbjct: 822 EKHPGCSWIEMDGKVHKFTARDKSHPESKEIY 853
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 133/517 (25%), Positives = 225/517 (43%), Gaps = 76/517 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKCGSLDDA+KVF MP+R +WN++
Sbjct: 125 MYGKCGSLDDAEKVFDEMPDRTAFAWNTM------------------------------- 153
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
IG + NG A+ + + M+ EG+ + ++L ACA+L+ + G E H +
Sbjct: 154 -----IGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLL 208
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNE-VSCNTIIVGYCENGNVAEA 179
+ G+ S F+VN LV +Y + D+ +A ++F F K + V N+I+ Y +G E
Sbjct: 209 VKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLET 268
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
ELF +M H+ G P S+T S L
Sbjct: 269 LELFREM-HM-----------------------------------TGPAPNSYTIVSALT 292
Query: 240 ACADMNSLRKGKEIHALAIALGLQ-SDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
AC + + GKEIHA + S+ +V AL+ MY R + A+ ++ N + +
Sbjct: 293 ACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVV 352
Query: 299 LGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYA 358
G+ N+ A++ FS+M++ D ++ I++A L+ + G ++HAY
Sbjct: 353 TWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYV 412
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGI 418
I+ G+DS++ +G L+DMY+KC + A+ R+ DL+S ++ YA + E +
Sbjct: 413 IKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEAL 472
Query: 419 AHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLL 478
FR + D + S L A S+ E + + ++ +VD+
Sbjct: 473 ELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTVIQNE-LVDVY 531
Query: 479 SRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
+ +G A + I D V W +++ +GN
Sbjct: 532 GKCRNMGYATRVFESIK-GKDVVSWTSMISSSALNGN 567
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 172/334 (51%), Gaps = 8/334 (2%)
Query: 150 KIFSKF-SIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDN 208
+IF F S + + ++ Y + G++ +A ++FD+M R +WN+MI YV N
Sbjct: 105 RIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMP----DRTAFAWNTMIGAYVSN 160
Query: 209 SLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFV 268
A +++ ++ + +G+ +F ++L ACA + +R G E+H+L + LG S F+
Sbjct: 161 GEPASALALYWNMRV-EGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFI 219
Query: 269 GGALVEMYCRYQDLVAAQMAFDEI-ENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLD 327
ALV MY + DL AA+ FD E + +L + + + ++LF EM
Sbjct: 220 VNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTG 279
Query: 328 LTPDIYTVGIILSACSSLATMERGKQVHAYAIRCG-YDSDVHIGTALVDMYAKCGSLKHA 386
P+ YT+ L+AC + + GK++HA ++ + S++++ AL+ MY +CG + A
Sbjct: 280 PAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQA 339
Query: 387 RLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHA 446
++++ D+V+ N+++ Y + KE + F ++A+G + D +S S ++A
Sbjct: 340 ERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRL 399
Query: 447 GSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSR 480
++ G E + + +L+ ++D+ S+
Sbjct: 400 SNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSK 433
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 108/432 (25%), Positives = 173/432 (40%), Gaps = 85/432 (19%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC + F M ++D +SW +V+ A N +EALE
Sbjct: 430 MYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALE---------------- 473
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEG-LEPNARTLSSVLPACARLQKLSLGKEFHGY 119
LFR A+ +E + L S+L A + L+ + + KE H +
Sbjct: 474 ---------------------LFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCH 512
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
I R G + + + N LVDVY +C +M A ++F K+ VS ++I NGN +EA
Sbjct: 513 ILRKGLL-DTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEA 571
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
ELF +M + G+ S +L
Sbjct: 572 VELFRRM------------------------------------VETGLSADSVALLCILS 595
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
A A +++L KG+EIH + G + + A+V+MY DL +A+ FD IE L
Sbjct: 596 AAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQ 655
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV----- 354
+ + + A++LF +M +++PD + +L ACS ++ G+
Sbjct: 656 YTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIME 715
Query: 355 HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST-PDLVSQNAMLTAYAMHGH 413
H Y + + V LVDM + + A K + T P A+L A H
Sbjct: 716 HEYELEPWPEHYV----CLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSE 771
Query: 414 GKEGIAHFRRIL 425
+ G +R+L
Sbjct: 772 KEIGEIAAQRLL 783
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 141/342 (41%), Gaps = 79/342 (23%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+YGKC ++ A +VF+ + +D VSW S++++ A NG NE+
Sbjct: 530 VYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNG----------------NES---- 569
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
EA+ + RM GL ++ L +L A A L L+ G+E H Y+
Sbjct: 570 ----------------EAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYL 613
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R GF + +VD+Y CGD+ SA +F + K + ++I Y +G A
Sbjct: 614 LRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAV 673
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFR-------------------DL 221
ELFD+M H V IS+ +++ L DE + D+
Sbjct: 674 ELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDM 733
Query: 222 LMRDG-------------IEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFV 268
L R EPT+ + ++L AC + KEI +A L+ +
Sbjct: 734 LGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSE----KEIGEIAAQRLLELEPKN 789
Query: 269 GGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPN 310
G LV + ++ A Q ++++E + KMK G E +
Sbjct: 790 PGNLVLV----SNVFAEQGRWNDVEKVR---AKMKASGMEKH 824
>gi|125591422|gb|EAZ31772.1| hypothetical protein OsJ_15924 [Oryza sativa Japonica Group]
Length = 855
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 192/635 (30%), Positives = 328/635 (51%), Gaps = 76/635 (11%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
M+ +CG +D A ++F + NS++ A + A+E E M+ D +V
Sbjct: 172 MFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERD-----VV 226
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ +I +Q+G EA+G++ M +G+ ++ T +S L ACARL L GK+ H +
Sbjct: 227 SWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKV 286
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R+ +P+V + L+++Y +CG A ++F+ +N VS +I G + +++
Sbjct: 287 IRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSV 346
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
ELF+QM +L+ D F +++
Sbjct: 347 ELFNQMR-------------------------------AELMAID-----QFALATLISG 370
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI-------- 292
C + L G+++H+L + G V +L+ +Y + DL A+ F +
Sbjct: 371 CFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSW 430
Query: 293 -------ENIENLLGKMKE--DGFEP-NVYTWNAM--------------QLFSEMLSL-D 327
I N++ K +E DG N TWNAM +++S MLS D
Sbjct: 431 TSMITAYSQIGNII-KAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKD 489
Query: 328 LTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHAR 387
+TPD T + C+ + + G Q+ + ++ G +V + A + MY+KCG + A+
Sbjct: 490 VTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQ 549
Query: 388 LAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAG 447
+ ++ D+VS NAM+T Y+ HG GK+ F +L+ G +PD+IS+++ LS C H+G
Sbjct: 550 KLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSG 609
Query: 448 SIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGAL 506
++ G +FD+M + + P L+H++CMVDLL RAG L EA + I K+PM P + +WGAL
Sbjct: 610 LVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGAL 669
Query: 507 LGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMH 566
L C HGN E ++AA + EL+ ++G+Y++LA +++ AG+ D A+ R+ M+D+ +
Sbjct: 670 LSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIK 729
Query: 567 KSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
K+PG SW+E +++H F+A D SH + I +D
Sbjct: 730 KNPGYSWMEVENKVHVFKADDVSHPQVIAIRNKMD 764
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 127/552 (23%), Positives = 243/552 (44%), Gaps = 81/552 (14%)
Query: 2 YGKCGSLDDAKKVFKM-MPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
Y CG+L DA+++ + + E + ++ N ++ A G + +A E +RM D +
Sbjct: 65 YLSCGALSDARRLLRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRD-----VA 119
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ ++ ++ P +S C L L + G
Sbjct: 120 SWNTLMSDTSR--------------------PAGSWMS-----CGALGCRELAPQLLGLF 154
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ F +P V LVD++ RCG + A ++FS+ N+++ GY + + A
Sbjct: 155 WKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAI 214
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
E F+ M +R ++SWN MI+ + EA + + + R G+ S T+ S L A
Sbjct: 215 EYFEDM----AERDVVSWNMMIAALSQSGRVREALGLVVE-MHRKGVRLDSTTYTSSLTA 269
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL- 299
CA + SL GK++HA I Q D +V AL+E+Y + A+ F+ +++ ++
Sbjct: 270 CARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSW 329
Query: 300 -----GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV 354
G ++ + F +V +LF++M + + D + + ++S C + + G+Q+
Sbjct: 330 TVLIGGSLQYECFSKSV------ELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQL 383
Query: 355 HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVS-------------- 400
H+ ++ G++ + + +L+ +YAKCG L++A + +S D+VS
Sbjct: 384 HSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNI 443
Query: 401 -----------------QNAMLTAYAMHGHGKEGIAHFRRILASG-FRPDHISFLSALSA 442
NAML AY HG ++G+ + +L+ PD +++++
Sbjct: 444 IKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRG 503
Query: 443 CVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVM 502
C G+ K G + + ++ + + S+ G + EA + + D V
Sbjct: 504 CADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLN-GKDVVS 562
Query: 503 WGALLGGCVSHG 514
W A++ G HG
Sbjct: 563 WNAMITGYSQHG 574
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 125/525 (23%), Positives = 214/525 (40%), Gaps = 107/525 (20%)
Query: 90 LEPNART--LSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLS 147
L P+A T L+ L +C L+ + HG + G S F+ N L+ Y CG +
Sbjct: 14 LLPHAVTQALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSD 73
Query: 148 ALKIFSKFSIK--NEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGY 205
A ++ + IK N ++ N ++ GY + G++++A ELFD+M +R + SWN+++S
Sbjct: 74 ARRLL-RADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMP----RRDVASWNTLMS-- 126
Query: 206 VDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSD 265
TS GS ++C + ++ L D
Sbjct: 127 -----------------------DTSRPAGS-WMSCGALGCRELAPQLLGLFWKFDFWGD 162
Query: 266 TFVGGALVEMYCRYQDLVAAQMAFDEIENI------ENLLGKMK-----------EDGFE 308
V ALV+M+ R + A F +IE L G K ED E
Sbjct: 163 PDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAE 222
Query: 309 PNVYTWN--------------AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV 354
+V +WN A+ L EM + D T L+AC+ L ++ GKQ+
Sbjct: 223 RDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQL 282
Query: 355 HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHG 414
HA IR D ++ +AL+++YAKCGS K A+ + + + VS ++ +
Sbjct: 283 HAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECF 342
Query: 415 KEGIAHFRRILASGFRPDHISFLSALSAC-----------VHAGSIKTG----------- 452
+ + F ++ A D + + +S C +H+ +K+G
Sbjct: 343 SKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSL 402
Query: 453 ------------SEF-FDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPD 499
+EF F M+ D+ +T M+ S+ G + +A EF + +
Sbjct: 403 ISLYAKCGDLQNAEFVFSSMSERDIVS----WTSMITAYSQIGNIIKAREFFDGMA-TRN 457
Query: 500 SVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLF 544
++ W A+LG + HG E G ++ + + T ++V LF
Sbjct: 458 AITWNAMLGAYIQHGAEEDGLKMYSAMLS-QKDVTPDWVTYVTLF 501
>gi|32487551|emb|CAE03754.1| OSJNBa0013K16.3 [Oryza sativa Japonica Group]
Length = 865
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 192/635 (30%), Positives = 328/635 (51%), Gaps = 76/635 (11%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
M+ +CG +D A ++F + NS++ A + A+E E M+ D +V
Sbjct: 182 MFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERD-----VV 236
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ +I +Q+G EA+G++ M +G+ ++ T +S L ACARL L GK+ H +
Sbjct: 237 SWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKV 296
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R+ +P+V + L+++Y +CG A ++F+ +N VS +I G + +++
Sbjct: 297 IRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSV 356
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
ELF+QM +L+ D F +++
Sbjct: 357 ELFNQMR-------------------------------AELMAID-----QFALATLISG 380
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI-------- 292
C + L G+++H+L + G V +L+ +Y + DL A+ F +
Sbjct: 381 CFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSW 440
Query: 293 -------ENIENLLGKMKE--DGFEP-NVYTWNAM--------------QLFSEMLSL-D 327
I N++ K +E DG N TWNAM +++S MLS D
Sbjct: 441 TSMITAYSQIGNII-KAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKD 499
Query: 328 LTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHAR 387
+TPD T + C+ + + G Q+ + ++ G +V + A + MY+KCG + A+
Sbjct: 500 VTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQ 559
Query: 388 LAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAG 447
+ ++ D+VS NAM+T Y+ HG GK+ F +L+ G +PD+IS+++ LS C H+G
Sbjct: 560 KLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSG 619
Query: 448 SIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGAL 506
++ G +FD+M + + P L+H++CMVDLL RAG L EA + I K+PM P + +WGAL
Sbjct: 620 LVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGAL 679
Query: 507 LGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMH 566
L C HGN E ++AA + EL+ ++G+Y++LA +++ AG+ D A+ R+ M+D+ +
Sbjct: 680 LSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIK 739
Query: 567 KSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
K+PG SW+E +++H F+A D SH + I +D
Sbjct: 740 KNPGYSWMEVENKVHVFKADDVSHPQVIAIRNKMD 774
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 134/553 (24%), Positives = 252/553 (45%), Gaps = 57/553 (10%)
Query: 2 YGKCGSLDDAKKVFKM-MPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
Y CG+L DA+++ + + E + ++ N ++ A G + +A E +RM D +
Sbjct: 49 YLSCGALSDARRLLRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRD-----VA 103
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLE-PNARTLSSVLPACARLQKLSLGKEFHGY 119
SW+ ++ G+ Q + + M G PNA T V+ +C L L + G
Sbjct: 104 SWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGL 163
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ F +P V LVD++ RCG + A ++FS+ N+++ GY + + A
Sbjct: 164 FWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHA 223
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
E F+ M +R ++SWN MI+ + EA + + + R G+ S T+ S L
Sbjct: 224 IEYFEDM----AERDVVSWNMMIAALSQSGRVREALGLVVE-MHRKGVRLDSTTYTSSLT 278
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
ACA + SL GK++HA I Q D +V AL+E+Y + A+ F+ +++ ++
Sbjct: 279 ACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVS 338
Query: 300 ------GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ 353
G ++ + F +V +LF++M + + D + + ++S C + + G+Q
Sbjct: 339 WTVLIGGSLQYECFSKSV------ELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQ 392
Query: 354 VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVS------------- 400
+H+ ++ G++ + + +L+ +YAKCG L++A + +S D+VS
Sbjct: 393 LHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGN 452
Query: 401 ------------------QNAMLTAYAMHGHGKEGIAHFRRILASG-FRPDHISFLSALS 441
NAML AY HG ++G+ + +L+ PD +++++
Sbjct: 453 IIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFR 512
Query: 442 ACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSV 501
C G+ K G + + ++ + + S+ G + EA + + D V
Sbjct: 513 GCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLN-GKDVV 571
Query: 502 MWGALLGGCVSHG 514
W A++ G HG
Sbjct: 572 SWNAMITGYSQHG 584
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 123/517 (23%), Positives = 216/517 (41%), Gaps = 77/517 (14%)
Query: 95 RTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIF-S 153
+ L+ L +C L+ + HG + G S F+ N L+ Y CG + A ++ +
Sbjct: 5 QALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRA 64
Query: 154 KFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDE 213
N ++ N ++ GY + G++++A ELFD+M +R + SWN+++SGY + +
Sbjct: 65 DIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMP----RRDVASWNTLMSGYFQARRFLD 120
Query: 214 AFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALV 273
F + P +FTF V+ +C + ++ L D V ALV
Sbjct: 121 GLETFVSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALV 180
Query: 274 EMYCRYQDLVAAQMAFDEIENI------ENLLGKMK-----------EDGFEPNVYTWN- 315
+M+ R + A F +IE L G K ED E +V +WN
Sbjct: 181 DMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNM 240
Query: 316 -------------AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCG 362
A+ L EM + D T L+AC+ L ++ GKQ+HA IR
Sbjct: 241 MIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSL 300
Query: 363 YDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFR 422
D ++ +AL+++YAKCGS K A+ + + + VS ++ + + + F
Sbjct: 301 PQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFN 360
Query: 423 RILASGFRPDHISFLSALSAC-----------VHAGSIKTG------------------- 452
++ A D + + +S C +H+ +K+G
Sbjct: 361 QMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCG 420
Query: 453 ----SEF-FDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALL 507
+EF F M+ D+ +T M+ S+ G + +A EF + +++ W A+L
Sbjct: 421 DLQNAEFVFSSMSERDIVS----WTSMITAYSQIGNIIKAREFFDGMA-TRNAITWNAML 475
Query: 508 GGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLF 544
G + HG E G ++ + + T ++V LF
Sbjct: 476 GAYIQHGAEEDGLKMYSAMLS-QKDVTPDWVTYVTLF 511
>gi|359481906|ref|XP_003632690.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Vitis vinifera]
Length = 635
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 194/603 (32%), Positives = 321/603 (53%), Gaps = 64/603 (10%)
Query: 4 KCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWS 63
K G + +A+++F M E D ++W +V++ G++ EA +R+ + N+V+W+
Sbjct: 64 KDGRIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEARRLFDRVDA----KKNVVTWT 119
Query: 64 AVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLS--SVLPACARLQKLSLGKEFHGYIT 121
A++GG+ ++ +A + M PN +S +++ A+ ++ Y+
Sbjct: 120 AMVGGYIRSNKISDAEKLFNEM------PNKNVVSWNTMIDGYAQNGRIDSAM----YLF 169
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
N N ++ + +CG + A ++F + ++ +S +I G +NG + EAR
Sbjct: 170 EKMPERNVVSWNTVMSMLAQCGRIEEARRLFDRMPERDVISWTAMIAGLSKNGRIDEARL 229
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
LFD+M +R ++SWN+MI+GY N DEA +F + RD P+ T + LI
Sbjct: 230 LFDRMP----ERNVVSWNAMITGYAQNLRLDEALDLFERMPERD--LPSWNTMITGLIQN 283
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK 301
D+ RK + + + T + G + E G+
Sbjct: 284 GDLRRARK--LFNEMPKKNVISWTTMITGCVQE-------------------------GE 316
Query: 302 MKEDGFEPNVYTWNAMQLFSEMLSLD-LTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
+E A+++FS MLS + P+ T +L ACS+LA + G+QVH +
Sbjct: 317 SEE-----------ALKIFSRMLSTNGAKPNQGTFVSVLGACSNLAGLGEGQQVHQIISK 365
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYK--RISTPDLVSQNAMLTAYAMHGHGKEGI 418
Y + +AL++MY+KCG L AR + S DLVS N ++ AYA HG+GKE I
Sbjct: 366 TVYQDSTFVVSALINMYSKCGELGTARKMFDDGMTSQRDLVSWNGIIAAYAHHGYGKEAI 425
Query: 419 AHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFD-LMAYYDVKPSLKHYTCMVDL 477
F+ + SGF+PD ++++ LSAC HAG ++ G ++FD L+ + HY C+VDL
Sbjct: 426 NFFKEMRKSGFKPDDVTYVGLLSACSHAGLVEEGLKYFDELVKDRSILVREDHYACLVDL 485
Query: 478 LSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNY 537
RAG L EA+ FI+++ P + +WGALL GC H N++ G+ AA +L+E+EP N G Y
Sbjct: 486 CGRAGRLKEAFGFIERLETKPSARVWGALLAGCNVHANVKIGKQAAKKLLEVEPENAGTY 545
Query: 538 VMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
++L+N++A G+W + AR R KMKD+ + K PGCSWIE + +H F D+SH +S+ IY
Sbjct: 546 LLLSNIYASTGKWREAARVRLKMKDKGLKKQPGCSWIEVGNRVHVFVVGDKSHSQSKLIY 605
Query: 598 TII 600
+++
Sbjct: 606 SLL 608
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 116/431 (26%), Positives = 204/431 (47%), Gaps = 27/431 (6%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y + + DA+K+F MP ++ VSWN+++ A NG + A+ E+M N+VS
Sbjct: 125 YIRSNKISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMYLFEKMPE-----RNVVS 179
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W+ V+ Q G EEA + RM E + + ++++ ++ ++ + +
Sbjct: 180 WNTVMSMLAQCGRIEEARRLFDRMP----ERDVISWTAMIAGLSKNGRIDEARLLFDRMP 235
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
+S N ++ Y + + AL +F + ++ S NT+I G +NG++ AR+
Sbjct: 236 ERNVVS----WNAMITGYAQNLRLDEALDLFERMPERDLPSWNTMITGLIQNGDLRRARK 291
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
LF++M ++ +ISW +MI+G V +EA +F +L +G +P TF SVL AC
Sbjct: 292 LFNEMP----KKNVISWTTMITGCVQEGESEEALKIFSRMLSTNGAKPNQGTFVSVLGAC 347
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK 301
+++ L +G+++H + Q TFV AL+ MY + +L A+ FD+ + L
Sbjct: 348 SNLAGLGEGQQVHQIISKTVYQDSTFVVSALINMYSKCGELGTARKMFDDGMTSQRDLVS 407
Query: 302 MKE--DGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
+ + Y A+ F EM PD T +LSACS +E G + +
Sbjct: 408 WNGIIAAYAHHGYGKEAINFFKEMRKSGFKPDDVTYVGLLSACSHAGLVEEGLKYFDELV 467
Query: 360 RCGYDSDVHIG----TALVDMYAKCGSLKHARLAYKRIST-PDLVSQNAMLTAYAMHGHG 414
+ D + + LVD+ + G LK A +R+ T P A+L +H +
Sbjct: 468 K---DRSILVREDHYACLVDLCGRAGRLKEAFGFIERLETKPSARVWGALLAGCNVHANV 524
Query: 415 KEGIAHFRRIL 425
K G +++L
Sbjct: 525 KIGKQAAKKLL 535
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 144/333 (43%), Gaps = 63/333 (18%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDC-------------------------------VSWNSV 29
M +CG +++A+++F MPERD VSWN++
Sbjct: 186 MLAQCGRIEEARRLFDRMPERDVISWTAMIAGLSKNGRIDEARLLFDRMPERNVVSWNAM 245
Query: 30 VTACAANGLVLEALECLERMSSLD------------------------NETP--NLVSWS 63
+T A N + EAL+ ERM D NE P N++SW+
Sbjct: 246 ITGYAQNLRLDEALDLFERMPERDLPSWNTMITGLIQNGDLRRARKLFNEMPKKNVISWT 305
Query: 64 AVIGGFTQNGYDEEAIGMLFRM-QAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITR 122
+I G Q G EEA+ + RM G +PN T SVL AC+ L L G++ H I++
Sbjct: 306 TMITGCVQEGESEEALKIFSRMLSTNGAKPNQGTFVSVLGACSNLAGLGEGQQVHQIISK 365
Query: 123 NGFMSNPFVVNGLVDVYRRCGDMLSALKIFSK--FSIKNEVSCNTIIVGYCENGNVAEAR 180
+ + FVV+ L+++Y +CG++ +A K+F S ++ VS N II Y +G EA
Sbjct: 366 TVYQDSTFVVSALINMYSKCGELGTARKMFDDGMTSQRDLVSWNGIIAAYAHHGYGKEAI 425
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
F +M G + +++ ++S L +E F +L+ I + ++
Sbjct: 426 NFFKEMRKSGFKPDDVTYVGLLSACSHAGLVEEGLKYFDELVKDRSILVREDHYACLVDL 485
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALV 273
C L KE L + V GAL+
Sbjct: 486 CGRAGRL---KEAFGFIERLETKPSARVWGALL 515
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 90/421 (21%), Positives = 172/421 (40%), Gaps = 69/421 (16%)
Query: 159 NEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMF 218
N CN +I ++G + EAR LFD+M + +I+W ++ISGY+ + +EA +F
Sbjct: 51 NVARCNWMITNLSKDGRIMEARRLFDEMR----EPDVITWTTVISGYIKCGMIEEARRLF 106
Query: 219 RDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCR 278
D ++ + + A+V Y R
Sbjct: 107 ------DRVDA---------------------------------KKNVVTWTAMVGGYIR 127
Query: 279 YQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGII 338
+ A+ F+E+ N + DG+ N +AM LF +M ++ + +
Sbjct: 128 SNKISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMYLFEKMPE----RNVVSWNTV 183
Query: 339 LSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDL 398
+S + +E +++ + DV TA++ +K G + ARL + R+ ++
Sbjct: 184 MSMLAQCGRIEEARRLFDRMP----ERDVISWTAMIAGLSKNGRIDEARLLFDRMPERNV 239
Query: 399 VSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDL 458
VS NAM+T YA + E + F R+ D S+ + ++ + G ++ + F+
Sbjct: 240 VSWNAMITGYAQNLRLDEALDLFERMPER----DLPSWNTMITGLIQNGDLRRARKLFNE 295
Query: 459 MAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKI----PMAPDSVMWGALLGGCVSHG 514
M K ++ +T M+ + GE EA + ++ P+ + ++LG C +
Sbjct: 296 MP----KKNVISWTTMITGCVQEGESEEALKIFSRMLSTNGAKPNQGTFVSVLGACSNLA 351
Query: 515 NLEFGQIAADRLIELEPNNTGNYVM--LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCS 572
L GQ ++I +V+ L N+++ G +L R+ D + S
Sbjct: 352 GLGEGQ-QVHQIISKTVYQDSTFVVSALINMYSKCG---ELGTARKMFDDGMTSQRDLVS 407
Query: 573 W 573
W
Sbjct: 408 W 408
>gi|255574750|ref|XP_002528283.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532320|gb|EEF34121.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 602
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 176/563 (31%), Positives = 301/563 (53%), Gaps = 39/563 (6%)
Query: 69 FTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFM-S 127
+ G +AI L + G+ ++TL+ +L CA + L LGK H ++ G
Sbjct: 25 LSSQGQLFQAISSLGLLSRNGIRLPSKTLAYLLQQCANTKSLKLGKWVHLHLKVTGLKRP 84
Query: 128 NPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQME 187
N F+ N L+++Y +CGD SA K+F + S +N S N ++ GY + G + AR+LFD+M
Sbjct: 85 NTFLANHLINMYSKCGDYPSAYKVFDEMSTRNLYSWNGMLSGYAKLGKIKPARKLFDKMP 144
Query: 188 HLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSL 247
++ ++SWN+M+ Y + ++A +R+L R GI ++F +L C + L
Sbjct: 145 ----EKDVVSWNTMVIAYAKSGFCNDALRFYREL-RRLGIGYNEYSFAGLLNICVKVKEL 199
Query: 248 RKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGF 307
K+ H + G S+ + ++++ Y + ++ A+ FDE+ + L G+
Sbjct: 200 ELSKQAHGQVLVAGFLSNLVISSSVLDAYAKCSEMGDARRLFDEMIIRDVLAWTTMVSGY 259
Query: 308 -----------------EPNVYTWN--------------AMQLFSEMLSLDLTPDIYTVG 336
E N W A++LF++M++L++ PD +T
Sbjct: 260 AQWGDVEAARELFDLMPEKNPVAWTSLIAGYARHDLGHKALELFTKMMALNIRPDQFTFS 319
Query: 337 IILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTP 396
L A +S+A++ GKQ+H Y IR + + ++L+DMY+KCG L+ RL + +
Sbjct: 320 SCLCASASIASLNHGKQIHGYLIRTNIRPNTIVVSSLIDMYSKCGCLEVGRLVFDLMGDK 379
Query: 397 -DLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEF 455
D+V N ++++ A HG G+E I F ++ G +PD I+ + L+AC H+G ++ G
Sbjct: 380 WDVVLWNTIISSLAQHGRGQEAIQMFDDMVRLGMKPDRITLIVLLNACSHSGLVQEGLRL 439
Query: 456 FD-LMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
++ + + + V P+ +HY C++DLL RAG ++K+P P+ +W ALLG C HG
Sbjct: 440 YESITSCHGVIPNQEHYACLIDLLGRAGHFDTLMNQLEKMPCKPNDEIWNALLGVCRMHG 499
Query: 515 NLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWI 574
N+EFG+ A+++IEL+P ++ YV+L+++ A GRW + RQ M +R + K SWI
Sbjct: 500 NIEFGREVAEKIIELDPQSSAAYVLLSSIHAAVGRWELVENVRQLMNERHVRKDRAISWI 559
Query: 575 EDRDEIHKFRASDRSHDRSEEIY 597
E +++H F ASDR H E IY
Sbjct: 560 EIENKVHSFTASDRLHPLKEVIY 582
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 118/429 (27%), Positives = 214/429 (49%), Gaps = 39/429 (9%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG A KVF M R+ SWN +++ A G + A + ++M D +V
Sbjct: 95 MYSKCGDYPSAYKVFDEMSTRNLYSWNGMLSGYAKLGKIKPARKLFDKMPEKD-----VV 149
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ ++ + ++G+ +A+ ++ G+ N + + +L C ++++L L K+ HG +
Sbjct: 150 SWNTMVIAYAKSGFCNDALRFYRELRRLGIGYNEYSFAGLLNICVKVKELELSKQAHGQV 209
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
GF+SN + + ++D Y +C +M A ++F + I++ ++ T++ GY + G+V AR
Sbjct: 210 LVAGFLSNLVISSSVLDAYAKCSEMGDARRLFDEMIIRDVLAWTTMVSGYAQWGDVEAAR 269
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
ELFD M ++ ++W S+I+GY + L +A +F +M I P FTF S L A
Sbjct: 270 ELFDLMP----EKNPVAWTSLIAGYARHDLGHKALELFTK-MMALNIRPDQFTFSSCLCA 324
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
A + SL GK+IH I ++ +T V +L++MY + L ++ FD +
Sbjct: 325 SASIASLNHGKQIHGYLIRTNIRPNTIVVSSLIDMYSKCGCLEVGRLVFDLM-------- 376
Query: 301 KMKEDGFEPNVYTWN--------------AMQLFSEMLSLDLTPDIYTVGIILSACSSLA 346
G + +V WN A+Q+F +M+ L + PD T+ ++L+ACS
Sbjct: 377 -----GDKWDVVLWNTIISSLAQHGRGQEAIQMFDDMVRLGMKPDRITLIVLLNACSHSG 431
Query: 347 TMERGKQVHAYAIRC-GYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNAM 404
++ G +++ C G + L+D+ + G +++ P+ NA+
Sbjct: 432 LVQEGLRLYESITSCHGVIPNQEHYACLIDLLGRAGHFDTLMNQLEKMPCKPNDEIWNAL 491
Query: 405 LTAYAMHGH 413
L MHG+
Sbjct: 492 LGVCRMHGN 500
>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
wallichii]
Length = 710
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 183/552 (33%), Positives = 304/552 (55%), Gaps = 20/552 (3%)
Query: 55 ETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGK 114
+ PNL+ W+ + G + A+ + M + GL PN T +L +CA+ + G+
Sbjct: 64 QEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQ 123
Query: 115 EFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
+ HG++ + G+ + +V L+ +Y + G + A K+F + S ++ VS +I GY G
Sbjct: 124 QIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKG 183
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTF 234
+A A+++FD++ + ++SWN+MISGY + EA +F+++ M+ + P T
Sbjct: 184 YIASAQKMFDEIP----IKDVVSWNAMISGYAETGNNKEALELFKEM-MKTNVRPDESTM 238
Query: 235 GSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAA-----QMAF 289
SV+ ACA S+ G+++H+ G S+ + AL+++Y + ++ A +++
Sbjct: 239 VSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSY 298
Query: 290 DEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATME 349
++ + L+G N+Y A+ LF EML +P+ T+ IL AC+ L +E
Sbjct: 299 KDVISWNTLIGGYTH----MNLYK-EALLLFQEMLRSGESPNDVTMLSILPACAHLGAIE 353
Query: 350 RGKQVHAYA---IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLT 406
G+ +H Y ++ ++ H T+L+DMYAKCG ++ A+ + I L S NAM+
Sbjct: 354 IGRWIHVYINKRLKGVANASSH-RTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIF 412
Query: 407 AYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVK 465
+AMHG F R+ + PD I+F+ LSAC H+G + G F M Y +
Sbjct: 413 GFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKIT 472
Query: 466 PSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADR 525
P L+HY CM+DLL +G EA E I + M PD V+W +LL C + N+E G+ A
Sbjct: 473 PKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMYANVELGESYAQN 532
Query: 526 LIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRA 585
LI++EP N G+YV+L+N++A AGRW+++A+ R + D+ M K PGCS IE +H+F
Sbjct: 533 LIKIEPKNPGSYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFII 592
Query: 586 SDRSHDRSEEIY 597
D+ H R+ EIY
Sbjct: 593 GDKFHPRNREIY 604
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 121/433 (27%), Positives = 206/433 (47%), Gaps = 53/433 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY + G L+DA+KVF RD VS+ +++T A+ G + A + + + D +V
Sbjct: 147 MYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKD-----VV 201
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A+I G+ + G ++EA+ + M + P+ T+ SV+ ACA+ + LG++ H +I
Sbjct: 202 SWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWI 261
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+GF SN +VN L+D+Y +CG++ +A +F S K+ +S NT+I GY
Sbjct: 262 DDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYT--------- 312
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
H+ +LY EA +F+++L R G P T S+L A
Sbjct: 313 -------HM-------------------NLYKEALLLFQEML-RSGESPNDVTMLSILPA 345
Query: 241 CADMNSLRKGKEIHALAIAL--GLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
CA + ++ G+ IH G+ + + +L++MY + D+ AAQ FD I N
Sbjct: 346 CAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLS 405
Query: 299 LGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV---- 354
GF + A +FS M ++ PD T +LSACS ++ G+ +
Sbjct: 406 SWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSM 465
Query: 355 -HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST-PDLVSQNAMLTAYAMHG 412
Y I + H G ++D+ G K A + PD V ++L A M+
Sbjct: 466 KEDYKITPKLE---HYG-CMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMYA 521
Query: 413 HGKEGIAHFRRIL 425
+ + G ++ + ++
Sbjct: 522 NVELGESYAQNLI 534
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 36/191 (18%), Positives = 80/191 (41%), Gaps = 4/191 (2%)
Query: 339 LSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVD---MYAKCGSLKHARLAYKRIST 395
LS + T++ + +HA I+ G + + + L++ + L +A ++ I
Sbjct: 6 LSLLHNCKTLQSLRMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQE 65
Query: 396 PDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEF 455
P+L+ N M +A+ + + +++ G P+ +F L +C + + + G +
Sbjct: 66 PNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQI 125
Query: 456 FDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
+ L +T ++ + + G L +A + + D V + AL+ G S G
Sbjct: 126 HGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQ-SSHRDVVSYTALITGYASKGY 184
Query: 516 LEFGQIAADRL 526
+ Q D +
Sbjct: 185 IASAQKMFDEI 195
>gi|222617261|gb|EEE53393.1| hypothetical protein OsJ_36441 [Oryza sativa Japonica Group]
Length = 1151
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 183/634 (28%), Positives = 337/634 (53%), Gaps = 71/634 (11%)
Query: 2 YGKCGSLDDAKKVFKMMP----ERDCVSWNSVVTACAANG-------------------- 37
+ +CG + A ++F+ M DCV+ +S++ ACA+ G
Sbjct: 219 HAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSD 278
Query: 38 LVLEA------LECLERMSSL----DNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQA 87
++E ++C + ++L ++ N+V W+ ++ F Q ++ + +MQA
Sbjct: 279 YIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQA 338
Query: 88 EGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLS 147
G+ PN T +L C +++ LG++ H + GF S+ +V L+D+Y
Sbjct: 339 AGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMY-------- 390
Query: 148 ALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVD 207
SK+ G + +AR + + ++ ++ ++SW SMI+GYV
Sbjct: 391 -----SKY------------------GWLEKARRVLEMLK----EKDVVSWTSMIAGYVQ 423
Query: 208 NSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTF 267
+ +A + F+++ + GI P + S + CA +N++R+G +IHA G D
Sbjct: 424 HECCKDALAAFKEM-QKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVS 482
Query: 268 VGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLD 327
+ ALV +Y R + A +F+E+E + + G GF + A+++F M
Sbjct: 483 IWNALVNLYARCGRIREAFSSFEEMELKDGITGNGLVSGFAQSGLHEEALKVFMRMDQSG 542
Query: 328 LTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHAR 387
+ +++T LSA ++LA +++GKQ+HA I+ G+ + +G AL+ +Y KCGS + A+
Sbjct: 543 VKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAK 602
Query: 388 LAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAG 447
+ + +S + VS N ++T+ + HG G E + F ++ G +P+ ++F+ L+AC H G
Sbjct: 603 MEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVG 662
Query: 448 SIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGAL 506
++ G +F M+ Y ++P HY C++D+ RAG+L A +FI+++P+A D+++W L
Sbjct: 663 LVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTL 722
Query: 507 LGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMH 566
L C H N+E G+ AA L+ELEP+++ +YV+L+N +A +W++ + R+ M+DR +
Sbjct: 723 LSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGVR 782
Query: 567 KSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTII 600
K PG SWIE ++ +H F DR H +E+IY +
Sbjct: 783 KEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFL 816
Score = 214 bits (546), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 130/488 (26%), Positives = 238/488 (48%), Gaps = 42/488 (8%)
Query: 27 NSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQ 86
N ++ + NGLVL A E +S+ DN VSW A++ G+ QNG EEA+G+ +M
Sbjct: 81 NLLIDLYSKNGLVLPARRVFEELSARDN-----VSWVAMLSGYAQNGLGEEALGLYRQMH 135
Query: 87 AEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDML 146
G+ P LSSVL +C + + + G+ H ++GF S FV N ++ +Y RCG
Sbjct: 136 RAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFR 195
Query: 147 SALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYV 206
A ++F C+ M H R +++N++ISG+
Sbjct: 196 LAERVF----------CD---------------------MPH----RDTVTFNTLISGHA 220
Query: 207 DNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDT 266
+ A +F ++ G+ P T S+L ACA + L+KG ++H+ G+ SD
Sbjct: 221 QCGHGEHALEIFEEMQF-SGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDY 279
Query: 267 FVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSL 326
+ G+L+++Y + D+ A + F+ + +L + F + +LF +M +
Sbjct: 280 IMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAA 339
Query: 327 DLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHA 386
+ P+ +T IL C+ ++ G+Q+H+ +++ G++SD+++ L+DMY+K G L+ A
Sbjct: 340 GIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKA 399
Query: 387 RLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHA 446
R + + D+VS +M+ Y H K+ +A F+ + G PD+I SA+S C
Sbjct: 400 RRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGI 459
Query: 447 GSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGAL 506
+++ G + + + + +V+L +R G + EA+ +++ + D + L
Sbjct: 460 NAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEMEL-KDGITGNGL 518
Query: 507 LGGCVSHG 514
+ G G
Sbjct: 519 VSGFAQSG 526
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 133/514 (25%), Positives = 231/514 (44%), Gaps = 73/514 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y +CGS A++VF MP RD V++N++++ A G ALE E
Sbjct: 187 LYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFE------------- 233
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
MQ GL P+ T+SS+L ACA L L G + H Y+
Sbjct: 234 -----------------------EMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYL 270
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G S+ + L+D+Y +CGD+ +AL IF+ N V N ++V + + ++A++
Sbjct: 271 FKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSF 330
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
ELF QM+ GI P FT+ +L
Sbjct: 331 ELFCQMQAA------------------------------------GIRPNQFTYPCILRT 354
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C + G++IH+L++ G +SD +V G L++MY +Y L A+ + ++ + +
Sbjct: 355 CTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSW 414
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G+ + +A+ F EM + PD + +S C+ + M +G Q+HA
Sbjct: 415 TSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYV 474
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
GY DV I ALV++YA+CG ++ A +++ + D ++ N +++ +A G +E +
Sbjct: 475 SGYSGDVSIWNALVNLYARCGRIREAFSSFEEMELKDGITGNGLVSGFAQSGLHEEALKV 534
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSR 480
F R+ SG + + +F+SALSA + IK G + + + ++ L +
Sbjct: 535 FMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGK 594
Query: 481 AGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
G +A ++ + V W ++ C HG
Sbjct: 595 CGSFEDAKMEFSEMS-ERNEVSWNTIITSCSQHG 627
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 101/431 (23%), Positives = 176/431 (40%), Gaps = 110/431 (25%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G L+ A++V +M+ E+D VSW S
Sbjct: 389 MYSKYGWLEKARRVLEMLKEKDVVSWTS-------------------------------- 416
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+I G+ Q+ ++A+ MQ G+ P+ L+S + CA + + G + H I
Sbjct: 417 ----MIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARI 472
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+G+ + + N LV++Y RCG + A F + +K+ ++ N ++ G+ ++G EA
Sbjct: 473 YVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEMELKDGITGNGLVSGFAQSGLHEEAL 532
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
++F +M+ GV+ + FTF S L A
Sbjct: 533 KVFMRMDQSGVKHNV------------------------------------FTFVSALSA 556
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
A++ +++GK+IHA I G +T VG AL+ +Y + A+M F E+
Sbjct: 557 SANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMS------- 609
Query: 301 KMKEDGFEPNVYTWN--------------AMQLFSEMLSLDLTPDIYTVGIILSACSSLA 346
E N +WN A+ LF +M + P+ T +L+ACS +
Sbjct: 610 -------ERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVG 662
Query: 347 TMERG-----KQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVS 400
+E G Y IR D ++D++ + G L A+ + + D +
Sbjct: 663 LVEEGLSYFKSMSDEYGIRPRPDHY----ACVIDIFGRAGQLDRAKKFIEEMPIAADAMV 718
Query: 401 QNAMLTAYAMH 411
+L+A +H
Sbjct: 719 WRTLLSACKVH 729
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 154/333 (46%), Gaps = 13/333 (3%)
Query: 191 VQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDG-IEPTSFTFGSVLIAC-ADMNSLR 248
+RG S ++G++ + + S+F D + G + P F L AC + +
Sbjct: 2 TRRGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGP--LDFACALRACRGNGRRWQ 59
Query: 249 KGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFE 308
EIHA A+ GL VG L+++Y + ++ A+ F+E+ +N+ G+
Sbjct: 60 VVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYA 119
Query: 309 PNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVH 368
N A+ L+ +M + P Y + +LS+C+ +G+ +HA + G+ S++
Sbjct: 120 QNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIF 179
Query: 369 IGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASG 428
+G A++ +Y +CGS + A + + D V+ N +++ +A GHG+ + F + SG
Sbjct: 180 VGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSG 239
Query: 429 FRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAY 488
PD ++ S L+AC G ++ G++ + + ++DL + G++ E
Sbjct: 240 LSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDV-ETA 298
Query: 489 EFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQI 521
I + V+W +L + FGQI
Sbjct: 299 LVIFNSSDRTNVVLWNLML--------VAFGQI 323
>gi|115488988|ref|NP_001066981.1| Os12g0552300 [Oryza sativa Japonica Group]
gi|113649488|dbj|BAF30000.1| Os12g0552300 [Oryza sativa Japonica Group]
Length = 1175
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 183/634 (28%), Positives = 337/634 (53%), Gaps = 71/634 (11%)
Query: 2 YGKCGSLDDAKKVFKMMP----ERDCVSWNSVVTACAANG-------------------- 37
+ +CG + A ++F+ M DCV+ +S++ ACA+ G
Sbjct: 219 HAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSD 278
Query: 38 LVLEA------LECLERMSSL----DNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQA 87
++E ++C + ++L ++ N+V W+ ++ F Q ++ + +MQA
Sbjct: 279 YIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQA 338
Query: 88 EGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLS 147
G+ PN T +L C +++ LG++ H + GF S+ +V L+D+Y
Sbjct: 339 AGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMY-------- 390
Query: 148 ALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVD 207
SK+ G + +AR + + ++ ++ ++SW SMI+GYV
Sbjct: 391 -----SKY------------------GWLEKARRVLEMLK----EKDVVSWTSMIAGYVQ 423
Query: 208 NSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTF 267
+ +A + F+++ + GI P + S + CA +N++R+G +IHA G D
Sbjct: 424 HECCKDALAAFKEM-QKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVS 482
Query: 268 VGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLD 327
+ ALV +Y R + A +F+EIE+ + + GF + A+++F M
Sbjct: 483 IWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSG 542
Query: 328 LTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHAR 387
+ +++T LSA ++LA +++GKQ+HA I+ G+ + +G AL+ +Y KCGS + A+
Sbjct: 543 VKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAK 602
Query: 388 LAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAG 447
+ + +S + VS N ++T+ + HG G E + F ++ G +P+ ++F+ L+AC H G
Sbjct: 603 MEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVG 662
Query: 448 SIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGAL 506
++ G +F M+ Y ++P HY C++D+ RAG+L A +FI+++P+A D+++W L
Sbjct: 663 LVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTL 722
Query: 507 LGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMH 566
L C H N+E G+ AA L+ELEP+++ +YV+L+N +A +W++ + R+ M+DR +
Sbjct: 723 LSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGVR 782
Query: 567 KSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTII 600
K PG SWIE ++ +H F DR H +E+IY +
Sbjct: 783 KEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFL 816
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 132/488 (27%), Positives = 238/488 (48%), Gaps = 42/488 (8%)
Query: 27 NSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQ 86
N ++ + NGLVL A E +S+ DN VSW A++ G+ QNG EEA+G+ +M
Sbjct: 81 NLLIDLYSKNGLVLPARRVFEELSARDN-----VSWVAMLSGYAQNGLGEEALGLYRQMH 135
Query: 87 AEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDML 146
G+ P LSSVL +C + + + G+ H ++GF S FV N ++ +Y RCG
Sbjct: 136 RAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFR 195
Query: 147 SALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYV 206
A ++F C+ M H R +++N++ISG+
Sbjct: 196 LAERVF----------CD---------------------MPH----RDTVTFNTLISGHA 220
Query: 207 DNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDT 266
+ A +F ++ G+ P T S+L ACA + L+KG ++H+ G+ SD
Sbjct: 221 QCGHGEHALEIFEEMQF-SGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDY 279
Query: 267 FVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSL 326
+ G+L+++Y + D+ A + F+ + +L + F + +LF +M +
Sbjct: 280 IMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAA 339
Query: 327 DLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHA 386
+ P+ +T IL C+ ++ G+Q+H+ +++ G++SD+++ L+DMY+K G L+ A
Sbjct: 340 GIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKA 399
Query: 387 RLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHA 446
R + + D+VS +M+ Y H K+ +A F+ + G PD+I SA+S C
Sbjct: 400 RRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGI 459
Query: 447 GSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGAL 506
+++ G + + + + +V+L +R G + EA+ ++I D + W L
Sbjct: 460 NAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEH-KDEITWNGL 518
Query: 507 LGGCVSHG 514
+ G G
Sbjct: 519 VSGFAQSG 526
Score = 198 bits (503), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 134/514 (26%), Positives = 231/514 (44%), Gaps = 73/514 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y +CGS A++VF MP RD V++N++++ A G ALE E
Sbjct: 187 LYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFE------------- 233
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
MQ GL P+ T+SS+L ACA L L G + H Y+
Sbjct: 234 -----------------------EMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYL 270
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G S+ + L+D+Y +CGD+ +AL IF+ N V N ++V + + ++A++
Sbjct: 271 FKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSF 330
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
ELF QM+ GI P FT+ +L
Sbjct: 331 ELFCQMQAA------------------------------------GIRPNQFTYPCILRT 354
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C + G++IH+L++ G +SD +V G L++MY +Y L A+ + ++ + +
Sbjct: 355 CTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSW 414
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G+ + +A+ F EM + PD + +S C+ + M +G Q+HA
Sbjct: 415 TSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYV 474
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
GY DV I ALV++YA+CG ++ A +++ I D ++ N +++ +A G +E +
Sbjct: 475 SGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKV 534
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSR 480
F R+ SG + + +F+SALSA + IK G + + + ++ L +
Sbjct: 535 FMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGK 594
Query: 481 AGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
G +A ++ + V W ++ C HG
Sbjct: 595 CGSFEDAKMEFSEMS-ERNEVSWNTIITSCSQHG 627
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 102/431 (23%), Positives = 176/431 (40%), Gaps = 110/431 (25%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G L+ A++V +M+ E+D VSW S
Sbjct: 389 MYSKYGWLEKARRVLEMLKEKDVVSWTS-------------------------------- 416
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+I G+ Q+ ++A+ MQ G+ P+ L+S + CA + + G + H I
Sbjct: 417 ----MIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARI 472
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+G+ + + N LV++Y RCG + A F + K+E++ N ++ G+ ++G EA
Sbjct: 473 YVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEAL 532
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
++F +M+ GV+ + FTF S L A
Sbjct: 533 KVFMRMDQSGVKHNV------------------------------------FTFVSALSA 556
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
A++ +++GK+IHA I G +T VG AL+ +Y + A+M F E+
Sbjct: 557 SANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMS------- 609
Query: 301 KMKEDGFEPNVYTWN--------------AMQLFSEMLSLDLTPDIYTVGIILSACSSLA 346
E N +WN A+ LF +M + P+ T +L+ACS +
Sbjct: 610 -------ERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVG 662
Query: 347 TMERG-----KQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVS 400
+E G Y IR D ++D++ + G L A+ + + D +
Sbjct: 663 LVEEGLSYFKSMSDEYGIRPRPDHY----ACVIDIFGRAGQLDRAKKFIEEMPIAADAMV 718
Query: 401 QNAMLTAYAMH 411
+L+A +H
Sbjct: 719 WRTLLSACKVH 729
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 154/333 (46%), Gaps = 13/333 (3%)
Query: 191 VQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDG-IEPTSFTFGSVLIAC-ADMNSLR 248
+RG S ++G++ + + S+F D + G + P F L AC + +
Sbjct: 2 TRRGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGP--LDFACALRACRGNGRRWQ 59
Query: 249 KGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFE 308
EIHA A+ GL VG L+++Y + ++ A+ F+E+ +N+ G+
Sbjct: 60 VVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYA 119
Query: 309 PNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVH 368
N A+ L+ +M + P Y + +LS+C+ +G+ +HA + G+ S++
Sbjct: 120 QNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIF 179
Query: 369 IGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASG 428
+G A++ +Y +CGS + A + + D V+ N +++ +A GHG+ + F + SG
Sbjct: 180 VGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSG 239
Query: 429 FRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAY 488
PD ++ S L+AC G ++ G++ + + ++DL + G++ E
Sbjct: 240 LSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDV-ETA 298
Query: 489 EFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQI 521
I + V+W +L + FGQI
Sbjct: 299 LVIFNSSDRTNVVLWNLML--------VAFGQI 323
>gi|108862806|gb|ABA99524.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1176
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 183/634 (28%), Positives = 337/634 (53%), Gaps = 71/634 (11%)
Query: 2 YGKCGSLDDAKKVFKMMP----ERDCVSWNSVVTACAANG-------------------- 37
+ +CG + A ++F+ M DCV+ +S++ ACA+ G
Sbjct: 219 HAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSD 278
Query: 38 LVLEA------LECLERMSSL----DNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQA 87
++E ++C + ++L ++ N+V W+ ++ F Q ++ + +MQA
Sbjct: 279 YIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQA 338
Query: 88 EGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLS 147
G+ PN T +L C +++ LG++ H + GF S+ +V L+D+Y
Sbjct: 339 AGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMY-------- 390
Query: 148 ALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVD 207
SK+ G + +AR + + ++ ++ ++SW SMI+GYV
Sbjct: 391 -----SKY------------------GWLEKARRVLEMLK----EKDVVSWTSMIAGYVQ 423
Query: 208 NSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTF 267
+ +A + F+++ + GI P + S + CA +N++R+G +IHA G D
Sbjct: 424 HECCKDALAAFKEM-QKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVS 482
Query: 268 VGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLD 327
+ ALV +Y R + A +F+EIE+ + + GF + A+++F M
Sbjct: 483 IWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSG 542
Query: 328 LTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHAR 387
+ +++T LSA ++LA +++GKQ+HA I+ G+ + +G AL+ +Y KCGS + A+
Sbjct: 543 VKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAK 602
Query: 388 LAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAG 447
+ + +S + VS N ++T+ + HG G E + F ++ G +P+ ++F+ L+AC H G
Sbjct: 603 MEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVG 662
Query: 448 SIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGAL 506
++ G +F M+ Y ++P HY C++D+ RAG+L A +FI+++P+A D+++W L
Sbjct: 663 LVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTL 722
Query: 507 LGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMH 566
L C H N+E G+ AA L+ELEP+++ +YV+L+N +A +W++ + R+ M+DR +
Sbjct: 723 LSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGVR 782
Query: 567 KSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTII 600
K PG SWIE ++ +H F DR H +E+IY +
Sbjct: 783 KEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFL 816
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 132/488 (27%), Positives = 238/488 (48%), Gaps = 42/488 (8%)
Query: 27 NSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQ 86
N ++ + NGLVL A E +S+ DN VSW A++ G+ QNG EEA+G+ +M
Sbjct: 81 NLLIDLYSKNGLVLPARRVFEELSARDN-----VSWVAMLSGYAQNGLGEEALGLYRQMH 135
Query: 87 AEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDML 146
G+ P LSSVL +C + + + G+ H ++GF S FV N ++ +Y RCG
Sbjct: 136 RAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFR 195
Query: 147 SALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYV 206
A ++F C+ M H R +++N++ISG+
Sbjct: 196 LAERVF----------CD---------------------MPH----RDTVTFNTLISGHA 220
Query: 207 DNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDT 266
+ A +F ++ G+ P T S+L ACA + L+KG ++H+ G+ SD
Sbjct: 221 QCGHGEHALEIFEEMQF-SGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDY 279
Query: 267 FVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSL 326
+ G+L+++Y + D+ A + F+ + +L + F + +LF +M +
Sbjct: 280 IMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAA 339
Query: 327 DLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHA 386
+ P+ +T IL C+ ++ G+Q+H+ +++ G++SD+++ L+DMY+K G L+ A
Sbjct: 340 GIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKA 399
Query: 387 RLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHA 446
R + + D+VS +M+ Y H K+ +A F+ + G PD+I SA+S C
Sbjct: 400 RRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGI 459
Query: 447 GSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGAL 506
+++ G + + + + +V+L +R G + EA+ ++I D + W L
Sbjct: 460 NAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEH-KDEITWNGL 518
Query: 507 LGGCVSHG 514
+ G G
Sbjct: 519 VSGFAQSG 526
Score = 197 bits (502), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 134/514 (26%), Positives = 231/514 (44%), Gaps = 73/514 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y +CGS A++VF MP RD V++N++++ A G ALE E
Sbjct: 187 LYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFE------------- 233
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
MQ GL P+ T+SS+L ACA L L G + H Y+
Sbjct: 234 -----------------------EMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYL 270
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G S+ + L+D+Y +CGD+ +AL IF+ N V N ++V + + ++A++
Sbjct: 271 FKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSF 330
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
ELF QM+ GI P FT+ +L
Sbjct: 331 ELFCQMQAA------------------------------------GIRPNQFTYPCILRT 354
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C + G++IH+L++ G +SD +V G L++MY +Y L A+ + ++ + +
Sbjct: 355 CTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSW 414
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G+ + +A+ F EM + PD + +S C+ + M +G Q+HA
Sbjct: 415 TSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYV 474
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
GY DV I ALV++YA+CG ++ A +++ I D ++ N +++ +A G +E +
Sbjct: 475 SGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKV 534
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSR 480
F R+ SG + + +F+SALSA + IK G + + + ++ L +
Sbjct: 535 FMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGK 594
Query: 481 AGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
G +A ++ + V W ++ C HG
Sbjct: 595 CGSFEDAKMEFSEMS-ERNEVSWNTIITSCSQHG 627
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 102/431 (23%), Positives = 176/431 (40%), Gaps = 110/431 (25%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G L+ A++V +M+ E+D VSW S
Sbjct: 389 MYSKYGWLEKARRVLEMLKEKDVVSWTS-------------------------------- 416
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+I G+ Q+ ++A+ MQ G+ P+ L+S + CA + + G + H I
Sbjct: 417 ----MIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARI 472
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+G+ + + N LV++Y RCG + A F + K+E++ N ++ G+ ++G EA
Sbjct: 473 YVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEAL 532
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
++F +M+ GV+ + FTF S L A
Sbjct: 533 KVFMRMDQSGVKHNV------------------------------------FTFVSALSA 556
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
A++ +++GK+IHA I G +T VG AL+ +Y + A+M F E+
Sbjct: 557 SANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMS------- 609
Query: 301 KMKEDGFEPNVYTWN--------------AMQLFSEMLSLDLTPDIYTVGIILSACSSLA 346
E N +WN A+ LF +M + P+ T +L+ACS +
Sbjct: 610 -------ERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVG 662
Query: 347 TMERG-----KQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVS 400
+E G Y IR D ++D++ + G L A+ + + D +
Sbjct: 663 LVEEGLSYFKSMSDEYGIRPRPDHY----ACVIDIFGRAGQLDRAKKFIEEMPIAADAMV 718
Query: 401 QNAMLTAYAMH 411
+L+A +H
Sbjct: 719 WRTLLSACKVH 729
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 154/333 (46%), Gaps = 13/333 (3%)
Query: 191 VQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDG-IEPTSFTFGSVLIAC-ADMNSLR 248
+RG S ++G++ + + S+F D + G + P F L AC + +
Sbjct: 2 TRRGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGP--LDFACALRACRGNGRRWQ 59
Query: 249 KGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFE 308
EIHA A+ GL VG L+++Y + ++ A+ F+E+ +N+ G+
Sbjct: 60 VVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYA 119
Query: 309 PNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVH 368
N A+ L+ +M + P Y + +LS+C+ +G+ +HA + G+ S++
Sbjct: 120 QNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIF 179
Query: 369 IGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASG 428
+G A++ +Y +CGS + A + + D V+ N +++ +A GHG+ + F + SG
Sbjct: 180 VGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSG 239
Query: 429 FRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAY 488
PD ++ S L+AC G ++ G++ + + ++DL + G++ E
Sbjct: 240 LSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDV-ETA 298
Query: 489 EFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQI 521
I + V+W +L + FGQI
Sbjct: 299 LVIFNSSDRTNVVLWNLML--------VAFGQI 323
>gi|225428647|ref|XP_002281535.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Vitis vinifera]
gi|297741370|emb|CBI32501.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 191/578 (33%), Positives = 312/578 (53%), Gaps = 47/578 (8%)
Query: 27 NSVVTACAANGLVLEALECLERMSSLDNETP--NLVSWSAVIGGFTQNGYDEEAIGMLFR 84
NS++ A GL+ +A + + TP N+VSW+ +I G +N EAI +
Sbjct: 60 NSLMNAYVYCGLLADAKQIF-------HHTPYKNVVSWTILISGLAKNDCFVEAIDVFRE 112
Query: 85 MQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGD 144
M +PNA T+SSVLPA A L + + K H + R GF N FV LVD+Y
Sbjct: 113 MIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVETALVDMY----- 167
Query: 145 MLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISG 204
SKF G + AR+LF+ M +R +++WN+++SG
Sbjct: 168 --------SKF------------------GCMGVARQLFESMS----ERNVVTWNAIVSG 197
Query: 205 YVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQS 264
Y D+ +EA +F +L+ R G+ +T S++ A + L+ G IH I G ++
Sbjct: 198 YSDHGFSEEAIDLF-NLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYEN 256
Query: 265 DTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEML 324
D + AL+++Y + + A F E+ + + GF + A++ F++ML
Sbjct: 257 DKHIKTALMDIYVSHNCVDDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKML 316
Query: 325 SL-DLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSL 383
+ +L D + ILS+CS +++G++VHA AI+ + +++ +G+A++DMYA CG+L
Sbjct: 317 GIQNLKLDSIALMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNL 376
Query: 384 KHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSAC 443
+ A+ + + D+V NAM+ M+G+G + I F ++ SG PD +F+S L AC
Sbjct: 377 EDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYAC 436
Query: 444 VHAGSIKTGSE-FFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVM 502
HAG + G + F+ ++ V P+L+HY C++D+L RAG+L AY FI +P PD +
Sbjct: 437 SHAGMVYEGLQIFYHMVKTSHVIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDV 496
Query: 503 WGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKD 562
+ LLG C HGN++ G + ++ E+EPN+ G YV+L+N++A AG W + TR ++
Sbjct: 497 YSTLLGACRIHGNIKLGHEISQKIFEMEPNDAGYYVLLSNMYALAGNWEGVKMTRASLRS 556
Query: 563 RRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTII 600
+RM K PG S IE EI+ F A ++ H + +I I+
Sbjct: 557 KRMKKDPGFSSIEINQEIYTFMAGEKDHPQYFKIEGIL 594
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 111/445 (24%), Positives = 202/445 (45%), Gaps = 44/445 (9%)
Query: 87 AEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDML 146
+ L P A+ +S+L +L+ L ++ H I +G N F+ N L++ Y CG +
Sbjct: 17 TQRLSPLAQPHASIL---RKLKDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLA 73
Query: 147 SALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYV 206
A +IF KN VS +I G +N
Sbjct: 74 DAKQIFHHTPYKNVVSWTILISGLAKN--------------------------------- 100
Query: 207 DNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDT 266
+ EA +FR+++M + +P + T SVL A A++ +R K +H + G + +
Sbjct: 101 --DCFVEAIDVFREMIMGN-FKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNV 157
Query: 267 FVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSL 326
FV ALV+MY ++ + A+ F+ + + G+ + ++ A+ LF+ M
Sbjct: 158 FVETALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFNLMRRK 217
Query: 327 DLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHA 386
L D YT+ ++ A S+ ++ G +H + IR GY++D HI TAL+D+Y + A
Sbjct: 218 GLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDA 277
Query: 387 RLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILA-SGFRPDHISFLSALSACVH 445
+ +S D+ + MLT ++ H I HF ++L + D I+ + LS+C H
Sbjct: 278 HRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIALMGILSSCSH 337
Query: 446 AGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGA 505
+G+++ G L ++ + ++D+ + G L +A F + D V W A
Sbjct: 338 SGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMG-EKDVVCWNA 396
Query: 506 LLGGCVSHGNLEFGQIAADRLIELE 530
++ G +G +G A D ++++
Sbjct: 397 MIAGNGMNG---YGTDAIDLFLQMK 418
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/422 (23%), Positives = 182/422 (43%), Gaps = 79/422 (18%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G + A+++F+ M ER+ V+WN++V+
Sbjct: 166 MYSKFGCMGVARQLFESMSERNVVTWNAIVS----------------------------- 196
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
G++ +G+ EEAI + M+ +GL + T+ S++PA + L +G HG+I
Sbjct: 197 -------GYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFI 249
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R G+ ++ + L+D+Y + A ++FS+ S+K+
Sbjct: 250 IRTGYENDKHIKTALMDIYVSHNCVDDAHRVFSEMSVKD--------------------- 288
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+ +W M++G+ +D A F +L ++ S +L +
Sbjct: 289 --------------VAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIALMGILSS 334
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C+ +L++G+ +HALAI ++ FVG A+++MY +L A+ F + + +
Sbjct: 335 CSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCW 394
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G N Y +A+ LF +M L PD T +L ACS + G Q+ + ++
Sbjct: 395 NAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVK 454
Query: 361 CGY-DSDVHIGTALVDMYAKCGSLKHARLAYKRIST----PDLVSQNAMLTAYAMHGHGK 415
+ ++ ++D+ + G L AY I+ PD + +L A +HG+ K
Sbjct: 455 TSHVIPNLQHYACVIDILGRAGQLD---AAYSFINNMPFQPDFDVYSTLLGACRIHGNIK 511
Query: 416 EG 417
G
Sbjct: 512 LG 513
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 80/184 (43%), Gaps = 38/184 (20%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY CG+L+DAK+ F M E+D V WN+++ A NG+
Sbjct: 369 MYANCGNLEDAKRFFYGMGEKDVVCWNAMI---AGNGM---------------------- 403
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKE-FHGY 119
NGY +AI + +M+ GL+P+ T SVL AC+ + G + F+
Sbjct: 404 -----------NGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHM 452
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCE-NGNVAE 178
+ + + N ++D+ R G + +A + + + + ++G C +GN+
Sbjct: 453 VKTSHVIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKL 512
Query: 179 AREL 182
E+
Sbjct: 513 GHEI 516
>gi|357506719|ref|XP_003623648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498663|gb|AES79866.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 707
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 186/594 (31%), Positives = 317/594 (53%), Gaps = 60/594 (10%)
Query: 10 DAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGF 69
DA +F MP+R+ VS+N +++ NG+V +A + + M N+VSW++++ G+
Sbjct: 70 DALLLFDQMPQRNTVSFNGMISGYVKNGMVADARKVFDVMPE-----RNVVSWTSMVRGY 124
Query: 70 TQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNP 129
Q G EEA + + M N + + ++ + ++ K+ I +
Sbjct: 125 VQEGMVEEAEKLFWEMPRR----NVVSWTVMIGGLLKESRIDDAKKLFDMIPEK----DV 176
Query: 130 FVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHL 189
VV ++ Y + G + A ++F + ++N + T++ GY +NG V AR+LF+ M
Sbjct: 177 VVVTNMIGGYCQVGRLDEARELFDEMKVRNVFTWTTMVSGYAKNGRVDVARKLFEVMP-- 234
Query: 190 GVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRK 249
+R +SW +M+ GY + EAF +F + P + ++AC +M
Sbjct: 235 --ERNEVSWTAMLMGYTQSGRMKEAFELFEAM-------PVKW-----IVACNEM----- 275
Query: 250 GKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEP 309
+ GL EM+ A+M F+ ++ + FE
Sbjct: 276 -------ILQFGLAG---------EMH-------RARMMFEGMKERDEGTWNAMIKVFER 312
Query: 310 NVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHI 369
A+ LF+ M + + ++ +LS C+SLA+++ G+QVHA +R +D D+++
Sbjct: 313 KGLDLEALGLFARMQREGVALNFPSMISVLSVCASLASLDHGRQVHARLVRSEFDQDLYV 372
Query: 370 GTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGF 429
+ L+ MY KCG L A+ + R D+V N+M+T Y+ HG G+E + F + +SG
Sbjct: 373 ASVLITMYVKCGDLVRAKGIFNRFLFKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGV 432
Query: 430 RPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLLSRAGELGEAY 488
+PD ++F+ LSAC ++G +K G E F+ M Y V+P ++HY CMVDLL RAG + EA
Sbjct: 433 QPDEVTFIGVLSACSYSGKVKEGFEIFEAMKCTYQVEPGIEHYACMVDLLGRAGRVDEAM 492
Query: 489 EFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAG 548
E ++K+PM PD+++WGALLG C +H L+ ++A ++L +LEP N G YV+L++++A G
Sbjct: 493 ELVEKMPMEPDAIVWGALLGACRNHMKLDLAEVAVEKLAKLEPKNAGPYVLLSHMYATKG 552
Query: 549 RWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASD-RSHDRSEEIYTIID 601
RW D+ R+K+ +RR+ K PGCSWIE ++H F D +SH I +++
Sbjct: 553 RWRDVEVLRKKI-NRRVIKFPGCSWIEVEKKVHMFTGGDSKSHPEQHMITQMLE 605
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 71/175 (40%), Gaps = 39/175 (22%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG L AK +F +D V WNS++T + +GL
Sbjct: 379 MYVKCGDLVRAKGIFNRFLFKDVVMWNSMITGYSQHGL---------------------- 416
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
EEA+ + M + G++P+ T VL AC+ K+ G E +
Sbjct: 417 --------------GEEALNVFHDMCSSGVQPDEVTFIGVLSACSYSGKVKEGFEIFEAM 462
Query: 121 TRNGFMSNPFVVN--GLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCEN 173
+ + P + + +VD+ R G + A+++ K ++ + ++G C N
Sbjct: 463 -KCTYQVEPGIEHYACMVDLLGRAGRVDEAMELVEKMPMEPDAIVWGALLGACRN 516
>gi|357504423|ref|XP_003622500.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497515|gb|AES78718.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 655
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 189/611 (30%), Positives = 309/611 (50%), Gaps = 83/611 (13%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KC +DAKK+F+ +P R N+V
Sbjct: 104 VYLKCQEAEDAKKLFEELPVR------------------------------------NVV 127
Query: 61 SWSAVIGGFTQNGYDEEAIGMLF------RMQAEGLEPNARTLSSVLPACARLQKLSLGK 114
SW+ +I + E+ GM RM E + P+ T + ++ C + + +G
Sbjct: 128 SWNIMIRASVGRNDENESSGMRLCFSYFRRMLLEMMVPDHITFNGLICLCTQFNDIEMGV 187
Query: 115 EFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
+ H + + GF + FV LV +Y +CG + +A ++F +VSC
Sbjct: 188 QLHCFTVKVGFDLDCFVGCALVGLYAKCGFVENARRVFC------DVSC----------- 230
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTF 234
R ++ WN M+S YV NSL +EAF +F + + D + FTF
Sbjct: 231 ------------------RDLVMWNVMVSCYVFNSLPEEAFRVFNSMRL-DVVNGDEFTF 271
Query: 235 GSVLIACAD--MNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI 292
S+L +D + GK++H+L + SD V AL+ MY + ++++ A+ FDE+
Sbjct: 272 SSLLSVISDDALEYYDFGKQVHSLVLRQSFDSDVLVASALINMYAKSENIIDARRVFDEM 331
Query: 293 ENIENLLG-KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG 351
+I N++ GF + M+L EML PD T+ I+S+C + +
Sbjct: 332 -SIRNVVAWNTMIVGFGNHGDGNEVMKLVKEMLREGFLPDELTISSIISSCGYASAITET 390
Query: 352 KQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMH 411
QVHA+A++ + + +L+ Y+KCGS+ A ++ S PDLV+ +++ AYA H
Sbjct: 391 LQVHAFAVKLSCQDFLSVANSLISAYSKCGSITSAFKCFELTSQPDLVTWTSLIYAYAFH 450
Query: 412 GHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKH 470
G ++ F ++L+ G +PD I+FL LSAC H G + G +F LM Y + P +H
Sbjct: 451 GLAEKSTEMFEKMLSYGIKPDRIAFLGVLSACAHCGLVTKGLHYFKLMTNAYQIVPDSEH 510
Query: 471 YTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELE 530
YTC+VDLL R G + EA+E ++ +P+ DS GA +G C H N+E ++AA++L +E
Sbjct: 511 YTCLVDLLGRYGLINEAFEILRSMPIEVDSDTLGAFIGSCKLHSNMELAKLAAEKLFLIE 570
Query: 531 PNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSH 590
P + NY +++N+FA W D+ R R+ M+D+R K PGCSWIE ++IH F ++D+SH
Sbjct: 571 PEKSVNYAVMSNIFASQKHWYDVERIRKTMEDKRDAKVPGCSWIEIGNQIHSFVSNDKSH 630
Query: 591 DRSEEIYTIID 601
+ E+Y ++
Sbjct: 631 PNALEMYVTLN 641
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 107/434 (24%), Positives = 195/434 (44%), Gaps = 47/434 (10%)
Query: 91 EPNARTL--SSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSA 148
+PN L S+ L A+ L GK+ H ++ + GF + N ++ VY +C + A
Sbjct: 55 DPNTVHLFCSNALKISAKKGYLPEGKQLHAHLIKFGFCQVLSLQNQILSVYLKCQEAEDA 114
Query: 149 LKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDN 208
K+F + ++N ++SWN MI V
Sbjct: 115 KKLFEELPVRN-----------------------------------VVSWNIMIRASVGR 139
Query: 209 SLYDEA------FSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGL 262
+ +E+ FS FR +L+ + + P TF ++ C N + G ++H + +G
Sbjct: 140 NDENESSGMRLCFSYFRRMLL-EMMVPDHITFNGLICLCTQFNDIEMGVQLHCFTVKVGF 198
Query: 263 QSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSE 322
D FVG ALV +Y + + A+ F ++ + ++ + + N A ++F+
Sbjct: 199 DLDCFVGCALVGLYAKCGFVENARRVFCDVSCRDLVMWNVMVSCYVFNSLPEEAFRVFNS 258
Query: 323 MLSLDLTPDIYTVGIILSACS--SLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKC 380
M + D +T +LS S +L + GKQVH+ +R +DSDV + +AL++MYAK
Sbjct: 259 MRLDVVNGDEFTFSSLLSVISDDALEYYDFGKQVHSLVLRQSFDSDVLVASALINMYAKS 318
Query: 381 GSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSAL 440
++ AR + +S ++V+ N M+ + HG G E + + +L GF PD ++ S +
Sbjct: 319 ENIIDARRVFDEMSIRNVVAWNTMIVGFGNHGDGNEVMKLVKEMLREGFLPDELTISSII 378
Query: 441 SACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDS 500
S+C +A +I + + L ++ S+ G + A++ ++ PD
Sbjct: 379 SSCGYASAITETLQVHAFAVKLSCQDFLSVANSLISAYSKCGSITSAFKCF-ELTSQPDL 437
Query: 501 VMWGALLGGCVSHG 514
V W +L+ HG
Sbjct: 438 VTWTSLIYAYAFHG 451
>gi|326504484|dbj|BAJ91074.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 823
Score = 327 bits (839), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 180/544 (33%), Positives = 305/544 (56%), Gaps = 43/544 (7%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
+V W+ +I + Q G +A+ + M +G EP+ T+SS++ ACA LG++ H
Sbjct: 213 TVVVWTLMITRYVQGGCAGKAVELFLGMLEDGFEPDGYTMSSMVSACAEQGSAGLGQQLH 272
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
+ R G +S+ V GLVD+Y +K ++ + C
Sbjct: 273 SLVLRLGLVSDTCVSCGLVDMY-------------TKLQMEQSMEC-------------- 305
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVD-NSLYDEAFSMFRDLLMRDGIEPTSFTFGS 236
AR++F +M ++SW ++ISGYV + A + ++L + IEP T+ S
Sbjct: 306 -ARKVFKRMP----THNVMSWTALISGYVQCGGQENNAVELLCEML-NESIEPNHLTYSS 359
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
+L ACA+++ G++IHA + + + VG ALV MY + A+ AFD++
Sbjct: 360 LLKACANLSDQDSGRQIHARVMKTSIGNVNVVGNALVSMYAESGCMEEARKAFDQLYE-R 418
Query: 297 NLLGKMKEDGFEPNV-YTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVH 355
NLL + G +W+ S++ S+D+ +T +LSA +++ +G+Q+H
Sbjct: 419 NLLSTSSDIGETGRSNASWS-----SQIESMDVGVSTFTFASLLSAAATVGLPTKGQQLH 473
Query: 356 AYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTP-DLVSQNAMLTAYAMHGHG 414
A +I+ G++SD I +LV MY++CG L A A+ + +++S ++++A A HGH
Sbjct: 474 ALSIKTGFESDKGISNSLVSMYSRCGYLDDACRAFDEMEDDHNVISWTSIISALAKHGHA 533
Query: 415 KEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTC 473
+ ++ F ++ SG +P+ +++++ LSAC H G +K G E+F M + + P ++HY C
Sbjct: 534 ERALSLFHDMILSGVKPNDVTYIAVLSACSHVGLVKEGKEYFRSMQKDHRLIPRMEHYAC 593
Query: 474 MVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNN 533
MVDLL+R+G + EA EFI ++P D+++W LLG C ++ N+E G+IAA +I+LEP +
Sbjct: 594 MVDLLARSGLVQEALEFINEMPCKADALVWKTLLGACRTYENIEIGEIAARHVIDLEPQD 653
Query: 534 TGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRS 593
YV+L+NL+A+ G W ++AR R M+ R + K G SW+ + IH+FRA D SH R+
Sbjct: 654 PAPYVLLSNLYAHGGLWDEVARIRSLMRHRNLSKETGLSWMHVGNTIHEFRAGDTSHPRA 713
Query: 594 EEIY 597
+EIY
Sbjct: 714 QEIY 717
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 157/355 (44%), Gaps = 44/355 (12%)
Query: 109 KLSLGKEFHGYITRNGFM-SNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTII 167
L LG+ H + + ++ V N L+ +Y +C
Sbjct: 58 DLRLGRALHRRLLGTEVLDADALVANSLLTMYSKC------------------------- 92
Query: 168 VGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGI 227
G+V AR +FD M L R ++SW +M N EA + ++L G+
Sbjct: 93 ------GHVRAARRVFDGMRGL---RDLVSWTAMAFCLTRNGAEQEALVLLGEML-ESGL 142
Query: 228 EPTSFTFGSVLIACADMNSLR-KGKEIHALAIALGL-QSDTFVGGALVEMYCRYQDLVAA 285
P +FT + AC R G + AI G +D VG AL++M+ R DLVAA
Sbjct: 143 RPNAFTLCAAAHACFPGELFRSSGGTVLGFAIKTGFWGTDVSVGCALIDMFARNGDLVAA 202
Query: 286 QMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSL 345
+ F+ + ++ + + A++LF ML PD YT+ ++SAC+
Sbjct: 203 RKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELFLGMLEDGFEPDGYTMSSMVSACAEQ 262
Query: 346 ATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKC---GSLKHARLAYKRISTPDLVSQN 402
+ G+Q+H+ +R G SD + LVDMY K S++ AR +KR+ T +++S
Sbjct: 263 GSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQMEQSMECARKVFKRMPTHNVMSWT 322
Query: 403 AMLTAYAMHGHGKE--GIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEF 455
A+++ Y G G+E + +L P+H+++ S L AC + +G +
Sbjct: 323 ALISGYVQCG-GQENNAVELLCEMLNESIEPNHLTYSSLLKACANLSDQDSGRQI 376
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 146/325 (44%), Gaps = 29/325 (8%)
Query: 262 LQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK------MKEDGFEPNVYTWN 315
L +D V +L+ MY + + AA+ FD + + +L+ + +G E
Sbjct: 75 LDADALVANSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFCLTRNGAEQE----- 129
Query: 316 AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMER-GKQVHAYAIRCGY-DSDVHIGTAL 373
A+ L EML L P+ +T+ AC G V +AI+ G+ +DV +G AL
Sbjct: 130 ALVLLGEMLESGLRPNAFTLCAAAHACFPGELFRSSGGTVLGFAIKTGFWGTDVSVGCAL 189
Query: 374 VDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDH 433
+DM+A+ G L AR + + +V M+T Y G + + F +L GF PD
Sbjct: 190 IDMFARNGDLVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELFLGMLEDGFEPDG 249
Query: 434 ISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTC----MVDLLSRAGELGEAYE 489
+ S +SAC GS G + L+ ++ L TC +VD+ ++ ++ ++ E
Sbjct: 250 YTMSSMVSACAEQGSAGLGQQLHSLV----LRLGLVSDTCVSCGLVDMYTKL-QMEQSME 304
Query: 490 FIKKI--PMAPDSVM-WGALLGGCVSHGNLEFGQIAADRLIE-LEPNNTGNYVMLANLFA 545
+K+ M +VM W AL+ G V G E A + L E L + N++ ++L
Sbjct: 305 CARKVFKRMPTHNVMSWTALISGYVQCGGQENN--AVELLCEMLNESIEPNHLTYSSLLK 362
Query: 546 YAGRWSDLARTRQKMKDRRMHKSPG 570
SD RQ + R M S G
Sbjct: 363 ACANLSDQDSGRQ-IHARVMKTSIG 386
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 79/190 (41%), Gaps = 41/190 (21%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +CG LDDA + F M + N++
Sbjct: 494 MYSRCGYLDDACRAFDEM-----------------------------------EDDHNVI 518
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+++I ++G+ E A+ + M G++PN T +VL AC+ + + GKE+ +
Sbjct: 519 SWTSIISALAKHGHAERALSLFHDMILSGVKPNDVTYIAVLSACSHVGLVKEGKEYFRSM 578
Query: 121 TRNG-FMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYC---ENGNV 176
++ + +VD+ R G + AL+ ++ K + ++G C EN +
Sbjct: 579 QKDHRLIPRMEHYACMVDLLARSGLVQEALEFINEMPCKADALVWKTLLGACRTYENIEI 638
Query: 177 AE--ARELFD 184
E AR + D
Sbjct: 639 GEIAARHVID 648
>gi|225423551|ref|XP_002274884.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
mitochondrial [Vitis vinifera]
gi|147818711|emb|CAN65040.1| hypothetical protein VITISV_009460 [Vitis vinifera]
Length = 700
Score = 327 bits (839), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 189/577 (32%), Positives = 295/577 (51%), Gaps = 75/577 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC ++D+++VF E L+R N+V
Sbjct: 181 MYAKCREVEDSRRVFD---------------------------EILDR---------NVV 204
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
W+++I G+ QN +E + + RM+ +E N TL S++ AC +L L GK HGY+
Sbjct: 205 CWTSMIVGYVQNDCLKEGLVLFNRMREGLVEGNQYTLGSLVTACTKLGALHQGKWVHGYV 264
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
++GF N F+V L+D+Y +CGD+ A +F + S +
Sbjct: 265 IKSGFDLNSFLVTPLLDLYFKCGDIRDAFSVFDELSTID--------------------- 303
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
++SW +MI GY EA +F D +D + P + T SVL A
Sbjct: 304 --------------LVSWTAMIVGYAQRGYPREALKLFTDERWKD-LLPNTVTTSSVLSA 348
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA SL G+ +H L I LG + TF ALV+MY + + A+ F+ + + + +
Sbjct: 349 CAQTGSLNMGRSVHCLGIKLGSEDATF-ENALVDMYAKCHMIGDARYVFETVFDKDVIAW 407
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G+ N Y + A++LF +M S + PD T+ +LSAC+S+ G +H YAI+
Sbjct: 408 NSIISGYTQNGYAYEALELFDQMRSDSVYPDAITLVSVLSACASVGAYRVGSSLHGYAIK 467
Query: 361 CGYDS-DVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
G S V++GTAL++ YAKCG + AR+ + + + ++ +AM+ Y + G +
Sbjct: 468 AGLLSGSVYVGTALLNFYAKCGDAESARVIFDEMGEKNTITWSAMIGGYGIQGDCSRSLE 527
Query: 420 HFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLL 478
F +L P+ + F + LSAC H+G + G +F+ M Y+ PS+KHY CMVDLL
Sbjct: 528 LFGDMLKEKLEPNEVIFTTILSACSHSGMLGEGWRYFNTMCQVYNFVPSMKHYACMVDLL 587
Query: 479 SRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYV 538
+RAG L EA +FI+KIP+ PD + GA L GC H + G++A R++EL P+ YV
Sbjct: 588 ARAGRLEEALDFIEKIPIQPDVSLLGAFLHGCRLHSRFDLGEVAVRRMLELHPDKACYYV 647
Query: 539 MLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIE 575
+++NL+A GRWS + + MK R + K PG S ++
Sbjct: 648 LMSNLYASEGRWSQANQVMELMKQRGLAKLPGWSLVD 684
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 141/325 (43%), Gaps = 40/325 (12%)
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
S+L C ++SLRK IHAL + GL D LV +Y + + A++ FD I N
Sbjct: 44 SLLGICKTVSSLRK---IHALLVVHGLSEDLLCETKLVSLYGSFGHVECARLMFDRIRN- 99
Query: 296 ENLLGKMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTP-DIYTVGIILS 340
P++Y+W M Q ++ L L D I+L
Sbjct: 100 -------------PDLYSWKVMIRWYFLNDSYSEIVQFYNTRLRKCLNEYDNVVFSIVLK 146
Query: 341 ACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVS 400
ACS L + G+++H ++ G D + T LVDMYAKC ++ +R + I ++V
Sbjct: 147 ACSELRETDEGRKLHCQIVKVG-SPDSFVLTGLVDMYAKCREVEDSRRVFDEILDRNVVC 205
Query: 401 QNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEF--FDL 458
+M+ Y + KEG+ F R+ + + S ++AC G++ G + +
Sbjct: 206 WTSMIVGYVQNDCLKEGLVLFNRMREGLVEGNQYTLGSLVTACTKLGALHQGKWVHGYVI 265
Query: 459 MAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG--NL 516
+ +D+ L T ++DL + G++ +A+ ++ D V W A++ G G
Sbjct: 266 KSGFDLNSFL--VTPLLDLYFKCGDIRDAFSVFDELSTI-DLVSWTAMIVGYAQRGYPRE 322
Query: 517 EFGQIAADRLIELEPNNTGNYVMLA 541
+R +L PN +L+
Sbjct: 323 ALKLFTDERWKDLLPNTVTTSSVLS 347
>gi|225430410|ref|XP_002282982.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 599
Score = 327 bits (839), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 190/576 (32%), Positives = 309/576 (53%), Gaps = 69/576 (11%)
Query: 45 CLERMSSLDNET--PNLVSWSAVIGGFTQNGYDEEAIGMLFRMQA-EGLEPNARTLSSVL 101
CL+ + + N+T P+ ++A+I ++ + AI + +M+A + + + T V
Sbjct: 53 CLDYATQVFNQTQEPDGFIYNAMIRAYSSSQTPCVAISIYNKMRACQNILGDKYTYPFVF 112
Query: 102 PACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEV 161
ACA + GKE HG I R G+ + F+ + L++ Y CG++ +A ++F +F K+
Sbjct: 113 KACASQFAVEKGKEVHGVIVRIGYELDGFLQSSLLNFYMVCGEIGNAQQVFDEFDAKD-- 170
Query: 162 SCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDL 221
++ WN++I+GY + ++F +F+++
Sbjct: 171 ---------------------------------VVFWNALITGYARQGMVLDSFGVFKEM 197
Query: 222 LMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIA-LGLQSDTFVGGALVEMYCRYQ 280
+ + P T +++AC + +L+ G+ IH + + L+ + AL+ +Y +
Sbjct: 198 VEVKEVRPNEGTMMGLIVACIESKNLKLGRAIHGYMMKDMVLREGVKLEAALINLYVKCG 257
Query: 281 DLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAM--------------QLFSEMLSL 326
L A+ FDEI E N WN++ +L EM
Sbjct: 258 YLDGARKLFDEIP--------------EKNTVVWNSLICGYCQIGSLNEVIELLREMHLS 303
Query: 327 DLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHA 386
+L PD +TV +LSAC+ + G VH +A + G DV IGTAL+DMYAKCG + A
Sbjct: 304 NLKPDRFTVSGVLSACAQMGAFNLGNWVHRFAEKKGI-WDVFIGTALIDMYAKCGFIGAA 362
Query: 387 RLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHA 446
R + +++ ++ + NA+L+ YA HG + I F + SG RPD I+FL+ L AC H+
Sbjct: 363 RKVFDQMNERNVATWNAILSGYASHGQAESAIELFSEMRESGARPDSITFLAVLHACAHS 422
Query: 447 GSIKTGSEFFDLM-AYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGA 505
G ++ G ++FDLM YY + P ++HY CMVDLL RAG L EA E IK + + P+ V+WGA
Sbjct: 423 GLVENGKQYFDLMLQYYKIPPRVEHYGCMVDLLGRAGLLQEARELIKMMVVEPNVVVWGA 482
Query: 506 LLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRM 565
LL C HGN+E G+ AA +I+L + G+YV+LANL+A A R++ + R+ M ++ +
Sbjct: 483 LLSACSIHGNIEIGEWAAHHMIKLNAMDGGSYVILANLYASAQRFNRVKAVREMMVEKGI 542
Query: 566 HKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
KS GCS IE D +H+F +D+ H RSEEIY+++D
Sbjct: 543 CKSHGCSMIEIGDVVHEFVVADKMHPRSEEIYSVLD 578
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 113/433 (26%), Positives = 184/433 (42%), Gaps = 111/433 (25%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y CG + +A++VF +D V WN+++T A G+VL++ + M
Sbjct: 150 YMVCGEIGNAQQVFDEFDAKDVVFWNALITGYARQGMVLDSFGVFKEM------------ 197
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
++ + + PN T+ ++ AC + L LG+ HGY+
Sbjct: 198 -----------------------VEVKEVRPNEGTMMGLIVACIESKNLKLGRAIHGYMM 234
Query: 122 RNGFMSNPFVVN-GLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
++ + + L+++Y +CG + A K+F + KN V N++I GYC+ G++ E
Sbjct: 235 KDMVLREGVKLEAALINLYVKCGYLDGARKLFDEIPEKNTVVWNSLICGYCQIGSLNEVI 294
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
EL +M HL ++P FT VL A
Sbjct: 295 ELLREM-HL-----------------------------------SNLKPDRFTVSGVLSA 318
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA M + G +H A G+ D F+G AL++MY + + AA+ FD++
Sbjct: 319 CAQMGAFNLGNWVHRFAEKKGIW-DVFIGTALIDMYAKCGFIGAARKVFDQMN------- 370
Query: 301 KMKEDGFEPNVYTWN--------------AMQLFSEMLSLDLTPDIYTVGIILSACSSLA 346
E NV TWN A++LFSEM PD T +L AC+
Sbjct: 371 -------ERNVATWNAILSGYASHGQAESAIELFSEMRESGARPDSITFLAVLHACAHSG 423
Query: 347 TMERGKQ-----VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHAR-LAYKRISTPDLVS 400
+E GKQ + Y I + H G +VD+ + G L+ AR L + P++V
Sbjct: 424 LVENGKQYFDLMLQYYKIPPRVE---HYG-CMVDLLGRAGLLQEARELIKMMVVEPNVVV 479
Query: 401 QNAMLTAYAMHGH 413
A+L+A ++HG+
Sbjct: 480 WGALLSACSIHGN 492
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 138/287 (48%), Gaps = 4/287 (1%)
Query: 233 TFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI 292
T SVL ++++ K+IHA +I L F+ ++ + + L A F++
Sbjct: 5 TPKSVLALIETCTNIQQLKQIHAKSIISSLSYTQFIITKIINSFLSHACLDYATQVFNQT 64
Query: 293 ENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSL-DLTPDIYTVGIILSACSSLATMERG 351
+ + + + + A+ ++++M + ++ D YT + AC+S +E+G
Sbjct: 65 QEPDGFIYNAMIRAYSSSQTPCVAISIYNKMRACQNILGDKYTYPFVFKACASQFAVEKG 124
Query: 352 KQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMH 411
K+VH +R GY+ D + ++L++ Y CG + +A+ + D+V NA++T YA
Sbjct: 125 KEVHGVIVRIGYELDGFLQSSLLNFYMVCGEIGNAQQVFDEFDAKDVVFWNALITGYARQ 184
Query: 412 GHGKEGIAHFRRIL-ASGFRPDHISFLSALSACVHAGSIKTGSEFFD-LMAYYDVKPSLK 469
G + F+ ++ RP+ + + + AC+ + ++K G +M ++ +K
Sbjct: 185 GMVLDSFGVFKEMVEVKEVRPNEGTMMGLIVACIESKNLKLGRAIHGYMMKDMVLREGVK 244
Query: 470 HYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNL 516
+++L + G L A + +IP ++V+W +L+ G G+L
Sbjct: 245 LEAALINLYVKCGYLDGARKLFDEIP-EKNTVVWNSLICGYCQIGSL 290
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 125/273 (45%), Gaps = 40/273 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KCG LD A+K+F +PE++ V WNS++ G + E +E L M L N
Sbjct: 252 LYVKCGYLDGARKLFDEIPEKNTVVWNSLICGYCQIGSLNEVIELLREM-HLSN------ 304
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
L+P+ T+S VL ACA++ +LG H +
Sbjct: 305 -----------------------------LKPDRFTVSGVLSACAQMGAFNLGNWVHRFA 335
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G + + F+ L+D+Y +CG + +A K+F + + +N + N I+ GY +G A
Sbjct: 336 EKKG-IWDVFIGTALIDMYAKCGFIGAARKVFDQMNERNVATWNAILSGYASHGQAESAI 394
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
ELF +M G + I++ +++ + L + F +L I P +G ++
Sbjct: 395 ELFSEMRESGARPDSITFLAVLHACAHSGLVENGKQYFDLMLQYYKIPPRVEHYGCMVDL 454
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALV 273
L++ +E+ + + ++ + V GAL+
Sbjct: 455 LGRAGLLQEARELIKMMV---VEPNVVVWGALL 484
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 79/186 (42%), Gaps = 6/186 (3%)
Query: 332 IYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYK 391
I T +L+ + +++ KQ+HA +I I T +++ + L +A +
Sbjct: 3 IQTPKSVLALIETCTNIQQLKQIHAKSIISSLSYTQFIITKIINSFLSHACLDYATQVFN 62
Query: 392 RISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILA-SGFRPDHISFLSALSACVHAGSIK 450
+ PD NAM+ AY+ I+ + ++ A D ++ AC +++
Sbjct: 63 QTQEPDGFIYNAMIRAYSSSQTPCVAISIYNKMRACQNILGDKYTYPFVFKACASQFAVE 122
Query: 451 TGSEFFDLMAY--YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLG 508
G E ++ Y++ L+ + +++ GE+G A + + A D V W AL+
Sbjct: 123 KGKEVHGVIVRIGYELDGFLQ--SSLLNFYMVCGEIGNAQQVFDEFD-AKDVVFWNALIT 179
Query: 509 GCVSHG 514
G G
Sbjct: 180 GYARQG 185
>gi|356542011|ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 876
Score = 327 bits (839), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 202/665 (30%), Positives = 330/665 (49%), Gaps = 106/665 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNS-------------------------------- 28
MY K G++ D ++VF M +RD VSWNS
Sbjct: 146 MYTKTGNVRDGRRVFDEMGDRDVVSWNSLLTGYSWNRFNDQVWELFCLMQVEGYRPDYYT 205
Query: 29 ---VVTACAANGLV----------------LEALECLERMSSL-------------DN-E 55
V+ A A G V E L C +S L DN E
Sbjct: 206 VSTVIAALANQGAVAIGMQIHALVVKLGFETERLVCNSLISMLSKSGMLRDARVVFDNME 265
Query: 56 TPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKE 115
+ VSW+++I G NG D EA MQ G +P T +SV+ +CA L++L L +
Sbjct: 266 NKDSVSWNSMIAGHVINGQDLEAFETFNNMQLAGAKPTHATFASVIKSCASLKELGLVRV 325
Query: 116 FHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGN 175
H ++G +N V+ L+ +C ++ A +FS
Sbjct: 326 LHCKTLKSGLSTNQNVLTALMVALTKCKEIDDAFSLFS---------------------- 363
Query: 176 VAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFG 235
+ H GVQ ++SW +MISGY+ N D+A ++F L+ R+G++P FT+
Sbjct: 364 ----------LMH-GVQ-SVVSWTAMISGYLQNGDTDQAVNLF-SLMRREGVKPNHFTYS 410
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
++L + EIHA I + + VG AL++ + + ++ A F+ IE
Sbjct: 411 TILT----VQHAVFISEIHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKVFELIETK 466
Query: 296 ENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSS-LATMERGKQV 354
+ + G+ T A ++F ++ + P+ +T I++AC++ A++E+GKQ
Sbjct: 467 DVIAWSAMLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINACTAPTASVEQGKQF 526
Query: 355 HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHG 414
HAYAI+ ++ + + ++LV +YAK G+++ A +KR DLVS N+M++ YA HG
Sbjct: 527 HAYAIKLRLNNALCVSSSLVTLYAKRGNIESAHEIFKRQKERDLVSWNSMISGYAQHGQA 586
Query: 415 KEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTC 473
K+ + F + D I+F+ +SAC HAG + G +F++M + + P+++HY+C
Sbjct: 587 KKALEVFEEMQKRNLEVDAITFIGVISACAHAGLVGKGQNYFNIMINDHHINPTMEHYSC 646
Query: 474 MVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNN 533
M+DL SRAG LG+A + I +P P + +W +L H N+E G++AA+++I LEP +
Sbjct: 647 MIDLYSRAGMLGKAMDIINGMPFPPAATVWRIVLAASRVHRNIELGKLAAEKIISLEPQH 706
Query: 534 TGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRS 593
+ YV+L+N++A AG W + R+ M RR+ K PG SWIE +++ + F A D SH S
Sbjct: 707 SAAYVLLSNIYAAAGNWHEKVNVRKLMDKRRVKKEPGYSWIEVKNKTYSFLAGDLSHPLS 766
Query: 594 EEIYT 598
+ IY+
Sbjct: 767 DHIYS 771
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 107/476 (22%), Positives = 211/476 (44%), Gaps = 58/476 (12%)
Query: 52 LDNETP--NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQK 109
L ++TP +L + ++ +++ +EA+ + + GL P++ T+S VL CA
Sbjct: 58 LFDQTPLRDLKQHNQLLFRYSRCDQTQEALHLFVSLYRSGLSPDSYTMSCVLSVCAGSFN 117
Query: 110 LSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVG 169
++G++ H + G + + V N LVD+Y + G++ ++F + ++ VS N+++ G
Sbjct: 118 GTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWNSLLTG 177
Query: 170 YCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEP 229
Y SW N D+ + +F L+ +G P
Sbjct: 178 Y--------------------------SW---------NRFNDQVWELF-CLMQVEGYRP 201
Query: 230 TSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAF 289
+T +V+ A A+ ++ G +IHAL + LG +++ V +L+ M + L A++ F
Sbjct: 202 DYYTVSTVIAALANQGAVAIGMQIHALVVKLGFETERLVCNSLISMLSKSGMLRDARVVF 261
Query: 290 DEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATME 349
D +EN +++ G N A + F+ M P T ++ +C+SL +
Sbjct: 262 DNMENKDSVSWNSMIAGHVINGQDLEAFETFNNMQLAGAKPTHATFASVIKSCASLKELG 321
Query: 350 RGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRI-STPDLVSQNAMLTAY 408
+ +H ++ G ++ ++ TAL+ KC + A + + +VS AM++ Y
Sbjct: 322 LVRVLHCKTLKSGLSTNQNVLTALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGY 381
Query: 409 AMHGHGKEGIAHFRRILASGFRPDHISFLSALSAC-------VHAGSIKTGSEFFDLMAY 461
+G + + F + G +P+H ++ + L+ +HA IKT
Sbjct: 382 LQNGDTDQAVNLFSLMRREGVKPNHFTYSTILTVQHAVFISEIHAEVIKTN--------- 432
Query: 462 YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
Y+ S+ T ++D + G + +A + + I D + W A+L G G E
Sbjct: 433 YEKSSSVG--TALLDAFVKIGNISDAVKVFELIE-TKDVIAWSAMLAGYAQAGETE 485
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 161/350 (46%), Gaps = 27/350 (7%)
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
A++LFDQ R + N ++ Y EA +F L R G+ P S+T VL
Sbjct: 55 AQQLFDQTP----LRDLKQHNQLLFRYSRCDQTQEALHLFVSL-YRSGLSPDSYTMSCVL 109
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
CA + G+++H + GL VG +LV+MY + ++ + FDE+ + + +
Sbjct: 110 SVCAGSFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDRDVV 169
Query: 299 LGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYA 358
G+ N + +LF M PD YTV +++A ++ + G Q+HA
Sbjct: 170 SWNSLLTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIHALV 229
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGI 418
++ G++++ + +L+ M +K G L+ AR+ + + D VS N+M+ + ++G E
Sbjct: 230 VKLGFETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDLEAF 289
Query: 419 AHFRRILASGFRPDHISFLSALSAC-----------VHAGSIKTGSEFFDLMAYYDVKPS 467
F + +G +P H +F S + +C +H ++K+G + +
Sbjct: 290 ETFNNMQLAGAKPTHATFASVIKSCASLKELGLVRVLHCKTLKSG-----------LSTN 338
Query: 468 LKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
T ++ L++ E+ +A+ + V W A++ G + +G+ +
Sbjct: 339 QNVLTALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTD 388
>gi|334185448|ref|NP_001078182.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273297|sp|Q9LHN5.1|PP242_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g18840
gi|9294693|dbj|BAB03093.1| unnamed protein product [Arabidopsis thaliana]
gi|332642633|gb|AEE76154.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 678
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 201/640 (31%), Positives = 336/640 (52%), Gaps = 48/640 (7%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y K G L +A+ VF M ER+ SWN+V+ A V EA E E DN +L+
Sbjct: 32 LYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNVKEARELFES----DNCERDLI 87
Query: 61 SWSAVIGGFTQ-NGYDEEAI---GMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEF 116
+++ ++ GF + +G + EAI G + R + + + + T+++++ A+L + G++
Sbjct: 88 TYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYGEQL 147
Query: 117 HGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIK--NEVSCNTIIVGYCENG 174
HG + + G F V+ L+ +Y +CG IF+ ++ + V+ N +I YC G
Sbjct: 148 HGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCREG 207
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTF 234
++ +A +F + L ISWN++I+GY N +EA M + +G++ +F
Sbjct: 208 DIDKALSVFWRNPELN---DTISWNTLIAGYAQNGYEEEALKMAVSM-EENGLKWDEHSF 263
Query: 235 GSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMA-----F 289
G+VL + + SL+ GKE+HA + G S+ FV +V++YC+ ++ A+ A F
Sbjct: 264 GAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGF 323
Query: 290 DEIENIENLL------GKMKE-----DGF-EPNVYTWNAMQLFSEMLS-----LDL---- 328
+ + +++ GKM E D E N+ W AM L L L+L
Sbjct: 324 GNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAF 383
Query: 329 ------TPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGS 382
TPD + +L ACS A ME GK++H +++R G D + TA VDMY+KCG+
Sbjct: 384 IANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGN 443
Query: 383 LKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSA 442
+++A + D V NAM+ A HGH + HF + GF+PD I+F++ LSA
Sbjct: 444 VEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSA 503
Query: 443 CVHAGSIKTGSEFF-DLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKI-PMAPDS 500
C H G + G ++F ++ Y++ P HYTCM+DL +A L +A E ++ I + D+
Sbjct: 504 CRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDA 563
Query: 501 VMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKM 560
V+ GA L C + N E + ++L+ +E +N Y+ +AN +A +GRW ++ R R +M
Sbjct: 564 VILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANAYASSGRWDEMQRIRHQM 623
Query: 561 KDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTII 600
+ + + GCSW + H F +SD SH +E IY ++
Sbjct: 624 RGKELEIFSGCSWANIDKQFHMFTSSDISHYETEAIYAML 663
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 110/452 (24%), Positives = 190/452 (42%), Gaps = 73/452 (16%)
Query: 133 NGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQ 192
N LV++Y + G + A +F + +N S N +I Y + NV EARELF E +
Sbjct: 27 NQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNVKEARELF---ESDNCE 83
Query: 193 RGIISWNSMISGYVD-NSLYDEAFSMFRDLLM--RDGIEPTSFTFGSVLIACADMNSLRK 249
R +I++N+++SG+ + EA MF ++ +D I FT +++ A + ++
Sbjct: 84 RDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFY 143
Query: 250 GKEIHALAIALGLQSDTFVGGALVEM---------------------------------Y 276
G+++H + + G F +L+ M Y
Sbjct: 144 GEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAY 203
Query: 277 CRYQDLVAAQMAFDEIENIENLLG-KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTV 335
CR D+ A F + + + G+ N Y A+++ M L D ++
Sbjct: 204 CREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSF 263
Query: 336 GIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST 395
G +L+ SSL +++ GK+VHA ++ G S+ + + +VD+Y KCG++K+A A+
Sbjct: 264 GAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGF 323
Query: 396 PDLVSQNAMLTAYAMHGHGKEGIAHFRRI--------------------------LASGF 429
+L S ++M+ Y+ G E F + LA F
Sbjct: 324 GNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAF 383
Query: 430 ------RPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGE 483
PD + +S L AC ++ G E + K T VD+ S+ G
Sbjct: 384 IANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGN 443
Query: 484 LGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
+ E E I D+VM+ A++ GC HG+
Sbjct: 444 V-EYAERIFDSSFERDTVMYNAMIAGCAHHGH 474
>gi|357121739|ref|XP_003562575.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Brachypodium distachyon]
Length = 770
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 182/615 (29%), Positives = 308/615 (50%), Gaps = 87/615 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y +CG+ DA+ +F MPE+ N+V
Sbjct: 122 VYMRCGNSQDARNLFDEMPEK------------------------------------NVV 145
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+A+I G+T N A+ + M G P+ TL +L AC + LGK+ HGY
Sbjct: 146 TWTALITGYTLNSQPVLALEVFVEMLKLGRYPSDYTLGGMLSACVASHNIDLGKQVHGYT 205
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G S + N L +Y + G++ S ++ F + KN
Sbjct: 206 IKYGAASITSIGNSLCRLYTKSGNLESGIRAFKRIPDKN--------------------- 244
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDE-AFSMFRDLLMRDGIEPTSFTFGSVLI 239
+I+W +MIS ++ Y E ++F D+L + + P FT SV+
Sbjct: 245 --------------VITWTTMISACAEDENYTELGLNLFLDML-KGEVMPNEFTLTSVMS 289
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIEN----- 294
C + GK++ +G ++ V + + +Y R + A F+E+E+
Sbjct: 290 LCGTSLDMNLGKQVQGFCFKIGCATNLPVKNSTMYLYLRKGETEEAMRLFEEMEDNSVIT 349
Query: 295 -------IENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLAT 347
++ K+D + A+++F +++ + PD++T ILS CS++
Sbjct: 350 WNAMISGFAQIMDSAKDD-LHARSRGFQALKIFRDLVRSAMKPDLFTFSSILSVCSTMMA 408
Query: 348 MERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTA 407
+E+G+Q+HA I+ G+ SDV + +ALV+MY KCG +++A A+ + T LV+ +M++
Sbjct: 409 LEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIEYATKAFVEMPTRTLVTWTSMISG 468
Query: 408 YAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKP 466
Y+ HG + I F ++ +G +P+ I+F+S LSAC +AG ++ +FD+M Y ++P
Sbjct: 469 YSQHGRPHDAIQLFEDMILAGAKPNEITFVSLLSACSYAGLVEEAMRYFDMMQNEYHIEP 528
Query: 467 SLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRL 526
+ HY CM+D+ R G L +AY FIK+ P+ +W +L+ GC SHGN+E AADRL
Sbjct: 529 LMDHYGCMIDMFVRLGRLDDAYAFIKRKGFEPNEAIWSSLVAGCRSHGNMELAFYAADRL 588
Query: 527 IELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRAS 586
+EL+P YV+L N++ GRW D+AR R+ K + SWI RD+++ F+A
Sbjct: 589 LELKPKVVETYVLLLNMYISTGRWRDVARVRKLSKHEDLGILRDRSWITIRDKVYFFKAD 648
Query: 587 DRSHDRSEEIYTIID 601
DRSH +S E+Y +++
Sbjct: 649 DRSHPQSTELYQLLE 663
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 123/512 (24%), Positives = 220/512 (42%), Gaps = 78/512 (15%)
Query: 76 EEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGL 135
+EA+ ML EG + +L C L K HG++ + G + + FV L
Sbjct: 64 QEAMAML----KEGQSVQSAMYVPLLHRCIETGSLGGAKALHGHMVKTGTIVDIFVATSL 119
Query: 136 VDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGI 195
V+VY RCG+ A +F + KN V+ +I GY N A E+F +M LG
Sbjct: 120 VNVYMRCGNSQDARNLFDEMPEKNVVTWTALITGYTLNSQPVLALEVFVEMLKLGRY--- 176
Query: 196 ISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHA 255
P+ +T G +L AC +++ GK++H
Sbjct: 177 ---------------------------------PSDYTLGGMLSACVASHNIDLGKQVHG 203
Query: 256 LAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL--GKMKEDGFEPNVYT 313
I G S T +G +L +Y + +L + AF I + +N++ M E YT
Sbjct: 204 YTIKYGAASITSIGNSLCRLYTKSGNLESGIRAFKRIPD-KNVITWTTMISACAEDENYT 262
Query: 314 WNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTAL 373
+ LF +ML ++ P+ +T+ ++S C + M GKQV + + G +++ + +
Sbjct: 263 ELGLNLFLDMLKGEVMPNEFTLTSVMSLCGTSLDMNLGKQVQGFCFKIGCATNLPVKNST 322
Query: 374 VDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYA---------MHG--HGKEGIAHFR 422
+ +Y + G + A ++ + +++ NAM++ +A +H G + + FR
Sbjct: 323 MYLYLRKGETEEAMRLFEEMEDNSVITWNAMISGFAQIMDSAKDDLHARSRGFQALKIFR 382
Query: 423 RILASGFRPDHISFLSALSAC-----------VHAGSIKTGSEFFDLMAYYDVKPSLKHY 471
++ S +PD +F S LS C +HA +IKTG F DV +
Sbjct: 383 DLVRSAMKPDLFTFSSILSVCSTMMALEQGEQIHAQTIKTG--FLS-----DVVVN---- 431
Query: 472 TCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFG-QIAADRLIELE 530
+ +V++ ++ G + A + ++P V W +++ G HG Q+ D ++
Sbjct: 432 SALVNMYNKCGCIEYATKAFVEMP-TRTLVTWTSMISGYSQHGRPHDAIQLFEDMILAGA 490
Query: 531 PNNTGNYVMLANLFAYAGRWSDLARTRQKMKD 562
N +V L + +YAG + R M++
Sbjct: 491 KPNEITFVSLLSACSYAGLVEEAMRYFDMMQN 522
>gi|449522252|ref|XP_004168141.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g37310-like [Cucumis sativus]
Length = 635
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 199/634 (31%), Positives = 317/634 (50%), Gaps = 102/634 (16%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
Y K GS+ DA VF +P ++ SWN++ + + + + L+ SSL N
Sbjct: 47 FYSKSGSIRDAYNVFGKIPRKNIFSWNALFISYTLHNM---HTDLLKLFSSLVN------ 97
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLS-LGKEFHGY 119
N D ++P+ T++ L A A L S L KE H +
Sbjct: 98 ----------SNSTD--------------VKPDRFTVTCSLKALASLFSNSGLAKEVHSF 133
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
I R G + FVVN L+ Y RC +++ A
Sbjct: 134 ILRRGLEYDIFVVNALITFYSRCDELVLA------------------------------- 162
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
R +FD+M +R +SWN+M++GY Y+E +FR +L ++P + T SVL
Sbjct: 163 RIMFDRMP----ERDTVSWNAMLAGYSQGGSYEECKELFRVMLSSVEVKPNALTAVSVLQ 218
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE--- 296
ACA N L G E+H ++ D + A++ +Y + L A+ F+E+ +
Sbjct: 219 ACAQSNDLTFGIEVHRFVNESQIKMDVSLWNAVIGLYAKCGILDYARELFEEMPEKDGIT 278
Query: 297 --NLLGKMKEDGF------------EPNVYTWNAM--------------QLFSEMLSLDL 328
+++ GF P + TWNA+ +F M S
Sbjct: 279 YCSMISGYMVHGFVNQAMDLFREQERPRLPTWNAVISGLVQNNRQEGAVDIFRAMQSHGC 338
Query: 329 TPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARL 388
P+ T+ IL S +T++ GK++H YAIR YD ++++ TA++D YAKCG L A+L
Sbjct: 339 RPNTVTLASILPVFSHFSTLKGGKEIHGYAIRNTYDRNIYVATAIIDSYAKCGYLHGAQL 398
Query: 389 AYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGS 448
+ +I L++ ++++AYA+HG ++ F +L +G +PD ++F S L+AC H+G
Sbjct: 399 VFDQIKGRSLIAWTSIISAYAVHGDANVALSLFYEMLTNGIQPDQVTFTSVLAACAHSGE 458
Query: 449 IKTGSEFFD-LMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALL 507
+ + F+ L+ Y ++P ++HY CMV +LSRAG+L +A EFI K+P+ P + +WGALL
Sbjct: 459 LDEAWKIFNVLLPEYGIQPLVEHYACMVGVLSRAGKLSDAVEFISKMPLEPTAKVWGALL 518
Query: 508 GGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHK 567
G G++E G+ DRL E+EP NTGNYV++ANL++ +GRW D R MK+ R+ K
Sbjct: 519 NGASVAGDVELGKYVFDRLFEIEPENTGNYVIMANLYSQSGRWKDADTIRDLMKEVRLKK 578
Query: 568 SPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
PG SWIE + +F S R+ E+Y +++
Sbjct: 579 IPGNSWIETSGGMQRF-CXRHSSVRTPEVYGMLE 611
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 145/300 (48%), Gaps = 34/300 (11%)
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
+G ++ C D R GK++HA + + D F+G L+ Y + I
Sbjct: 6 YGRLIQHCTDHLFFRVGKQLHARLVLSSVVPDNFLGSKLISFYSKS----------GSIR 55
Query: 294 NIENLLGKMKEDGFEPNVYTWNAM--------------QLFSEML---SLDLTPDIYTVG 336
+ N+ GK+ N+++WNA+ +LFS ++ S D+ PD +TV
Sbjct: 56 DAYNVFGKIPRK----NIFSWNALFISYTLHNMHTDLLKLFSSLVNSNSTDVKPDRFTVT 111
Query: 337 IILSACSSL-ATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST 395
L A +SL + K+VH++ +R G + D+ + AL+ Y++C L AR+ + R+
Sbjct: 112 CSLKALASLFSNSGLAKEVHSFILRRGLEYDIFVVNALITFYSRCDELVLARIMFDRMPE 171
Query: 396 PDLVSQNAMLTAYAMHGHGKEGIAHFRRILAS-GFRPDHISFLSALSACVHAGSIKTGSE 454
D VS NAML Y+ G +E FR +L+S +P+ ++ +S L AC + + G E
Sbjct: 172 RDTVSWNAMLAGYSQGGSYEECKELFRVMLSSVEVKPNALTAVSVLQACAQSNDLTFGIE 231
Query: 455 FFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
+ +K + + ++ L ++ G L A E +++P D + + +++ G + HG
Sbjct: 232 VHRFVNESQIKMDVSLWNAVIGLYAKCGILDYARELFEEMP-EKDGITYCSMISGYMVHG 290
>gi|125579001|gb|EAZ20147.1| hypothetical protein OsJ_35746 [Oryza sativa Japonica Group]
Length = 601
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 199/626 (31%), Positives = 304/626 (48%), Gaps = 102/626 (16%)
Query: 18 MPERDCVSWNS-----------------------------------VVTACAAN-----G 37
MPERD VSWNS VV AC G
Sbjct: 1 MPERDVVSWNSLVSAFLVNGMFHDARRALVSMMRSGFPLNVASLVSVVPACGTEQEEKFG 60
Query: 38 LVLEALEC---LERMSSLDNE----------------------TPNLVSWSAVIGGFTQN 72
L + AL L M +L N N VSW++ IG F
Sbjct: 61 LSIHALAVKVGLNTMVNLANALVDMYGKFGDVEASMQVFDGMLEQNEVSWNSAIGCFLNA 120
Query: 73 GYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVV 132
G+ + + M +M + P + TLSS+LPA L LG+E HGY + + FV
Sbjct: 121 GFYGDVLRMFRKMSEHNVMPGSITLSSLLPALVELGSFDLGREVHGYSIKRAMDLDIFVA 180
Query: 133 NGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQ 192
N LVD+Y +KF G++ +A +F+QM+
Sbjct: 181 NSLVDMY-------------AKF------------------GSLEKASTIFEQMK----D 205
Query: 193 RGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKE 252
R ++SWN+MI+ V N EAF + D+ + G P S T +VL ACA M SL+ GK+
Sbjct: 206 RNVVSWNAMIANLVQNGAETEAFRLVTDM-QKSGECPNSITLVNVLPACARMASLKMGKQ 264
Query: 253 IHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVY 312
IHA +I GL D F+ AL++MY + L A+ F+ E +++ G+ + +
Sbjct: 265 IHAWSIRRGLMFDLFISNALIDMYSKCGQLSLARNIFERSEK-DDVSYNTLILGYSQSPW 323
Query: 313 TWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTA 372
+ ++ LF +M S+ + D + LSAC++L+ + GK++H +R + +
Sbjct: 324 CFESLLLFKQMRSVGIDYDAVSFMGALSACTNLSVFKHGKEIHCVLVRRLLSGHPFLSNS 383
Query: 373 LVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPD 432
L+D+Y K G L A + +I+ D+ S N M+ Y MHG F + G D
Sbjct: 384 LLDLYTKGGMLVTASKIFNKITKKDVASWNTMILGYGMHGQIDIAFELFELMKGDGLDYD 443
Query: 433 HISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIK 492
H+S+++ L+AC H G + G ++F M +++P HY CMVDLL RAG+L + E I+
Sbjct: 444 HVSYIAVLAACSHGGLVDKGKKYFSQMVAQNIEPQQMHYACMVDLLGRAGQLSKCAEIIR 503
Query: 493 KIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSD 552
+P +S +WGALLG C HGN+E Q AA+ L EL+P ++G Y ++ N++A GRW++
Sbjct: 504 DMPFPANSDVWGALLGACRIHGNIELAQWAAEHLFELKPEHSGYYTLMINMYAETGRWNE 563
Query: 553 LARTRQKMKDRRMHKSPGCSWIEDRD 578
+ R+ MK R++ K+P SW++D+D
Sbjct: 564 ANKIRKLMKSRKVQKNPAYSWVQDQD 589
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 116/427 (27%), Positives = 191/427 (44%), Gaps = 75/427 (17%)
Query: 6 GSLDDAKKV----FKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
GS D ++V K + D NS+V A G + +A E+M + N+VS
Sbjct: 156 GSFDLGREVHGYSIKRAMDLDIFVANSLVDMYAKFGSLEKASTIFEQM-----KDRNVVS 210
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W+A+I QNG + EA ++ MQ G PN+ TL +VLPACAR+ L +GK+ H +
Sbjct: 211 WNAMIANLVQNGAETEAFRLVTDMQKSGECPNSITLVNVLPACARMASLKMGKQIHAWSI 270
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
R G M + F+ N L+D+Y +CG + A IF + S K++VS NT+I+GY ++ E+
Sbjct: 271 RRGLMFDLFISNALIDMYSKCGQLSLARNIFER-SEKDDVSYNTLILGYSQSPWCFESLL 329
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
LF QM +G+ YD + +F L AC
Sbjct: 330 LFKQMRSVGID------------------YD------------------AVSFMGALSAC 353
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK 301
+++ + GKEIH + + L F+ +L+++Y + LV A F++I
Sbjct: 354 TNLSVFKHGKEIHCVLVRRLLSGHPFLSNSLLDLYTKGGMLVTASKIFNKIT-------- 405
Query: 302 MKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSSLAT 347
+ +V +WN M +LF M L D + +L+ACS
Sbjct: 406 ------KKDVASWNTMILGYGMHGQIDIAFELFELMKGDGLDYDHVSYIAVLAACSHGGL 459
Query: 348 MERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTP-DLVSQNAMLT 406
+++GK+ + + + +VD+ + G L + + P + A+L
Sbjct: 460 VDKGKKYFSQMVAQNIEPQQMHYACMVDLLGRAGQLSKCAEIIRDMPFPANSDVWGALLG 519
Query: 407 AYAMHGH 413
A +HG+
Sbjct: 520 ACRIHGN 526
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 85/196 (43%), Gaps = 7/196 (3%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y K G L A K+F + ++D SWN+++ +G + A E E M D + V
Sbjct: 387 LYTKGGMLVTASKIFNKITKKDVASWNTMILGYGMHGQIDIAFELFELMKG-DGLDYDHV 445
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
S+ AV+ + G ++ +M A+ +EP + ++ R +LS E I
Sbjct: 446 SYIAVLAACSHGGLVDKGKKYFSQMVAQNIEPQQMHYACMVDLLGRAGQLSKCAEI---I 502
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDM-LSALKIFSKFSIKNEVS--CNTIIVGYCENGNVA 177
F +N V L+ R G++ L+ F +K E S +I Y E G
Sbjct: 503 RDMPFPANSDVWGALLGACRIHGNIELAQWAAEHLFELKPEHSGYYTLMINMYAETGRWN 562
Query: 178 EARELFDQMEHLGVQR 193
EA ++ M+ VQ+
Sbjct: 563 EANKIRKLMKSRKVQK 578
>gi|357154827|ref|XP_003576915.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like, partial [Brachypodium distachyon]
Length = 735
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 188/587 (32%), Positives = 291/587 (49%), Gaps = 73/587 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGK G ++ + KVF+ MPER+ VSWNS
Sbjct: 221 MYGKFGHVEASMKVFEGMPERNEVSWNS-------------------------------- 248
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
IG F G + + + M G P + TLSS+LPA L LG+E HGY
Sbjct: 249 ----AIGCFLNAGLYGDVLALFRGMSERGFMPGSITLSSLLPALVELGYFDLGREVHGYS 304
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ + FV N LVD+Y + G + A +F K ++N VS N +I +NG +EA
Sbjct: 305 IKRAMELDIFVANSLVDMYAKFGSLEKACAVFEKIEVRNVVSWNAMIANLVQNGAESEAF 364
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
L +M+ +DG P S T ++L A
Sbjct: 365 GLVIKMQ------------------------------------KDGECPNSITLVNLLPA 388
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C+ M SL+ GK+IHA +I GL D F+ AL++MY + L AQ FD E +++
Sbjct: 389 CSRMASLKTGKQIHAWSIRTGLMFDLFISNALIDMYAKCGQLRLAQSIFDLSEK-DDVSY 447
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G+ + +++ ++ LF ++ S+ + D + L+AC++L++ ++GK++H +R
Sbjct: 448 NTLILGYSQSPWSFESLNLFKQLSSVGIEYDAISFMGALTACTNLSSFKQGKEIHGVLVR 507
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
+ + L+ +Y K G L A + RI D+ S N M+ Y MHG
Sbjct: 508 RLLSNHPFLANTLLGLYTKGGMLDTASKIFNRIKEKDVASWNNMIMGYGMHGQIDAAFHL 567
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSR 480
F + G DH+S+++ LS C H G ++ G ++F M +++P HY CMVDLL R
Sbjct: 568 FDLMKDHGVTYDHVSYIAVLSVCSHGGLVERGKKYFSHMLAQNLEPQQMHYACMVDLLGR 627
Query: 481 AGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVML 540
+G+L E+ E I +P +S +WGALLG C HGN+E Q AAD L EL+P ++G Y +L
Sbjct: 628 SGQLTESVEIILDMPFHANSDVWGALLGACRIHGNIELAQYAADHLFELKPEHSGYYSVL 687
Query: 541 ANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASD 587
N++A AGRW++ + R MK R++ K+P SW++ +++ F D
Sbjct: 688 RNMYAEAGRWNEAHKIRTLMKSRKVQKNPAYSWVQSGNKLQAFLVGD 734
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 156/335 (46%), Gaps = 33/335 (9%)
Query: 164 NTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLM 223
NT++ Y G+ +AR +FD+M R ++SWNS++S ++ N ++D+A + M
Sbjct: 115 NTLVAFYAACGHAGDARRVFDEMP----ARDVVSWNSLVSSFLANKMFDDARQALLSM-M 169
Query: 224 RDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLV 283
R G+ + SV+ AC G +H L + GL S +G ALV+MY ++ +
Sbjct: 170 RSGVPVNVASLVSVVPACGVEQEGGFGLGVHGLVLKTGLDSIVNLGNALVDMYGKFGHVE 229
Query: 284 AAQMAFDEIENIENLLGKMKEDGFEPNVYTWNA--------------MQLFSEMLSLDLT 329
A+ F+ + E N +WN+ + LF M
Sbjct: 230 ASMKVFEGMP--------------ERNEVSWNSAIGCFLNAGLYGDVLALFRGMSERGFM 275
Query: 330 PDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLA 389
P T+ +L A L + G++VH Y+I+ + D+ + +LVDMYAK GSL+ A
Sbjct: 276 PGSITLSSLLPALVELGYFDLGREVHGYSIKRAMELDIFVANSLVDMYAKFGSLEKACAV 335
Query: 390 YKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSI 449
+++I ++VS NAM+ +G E ++ G P+ I+ ++ L AC S+
Sbjct: 336 FEKIEVRNVVSWNAMIANLVQNGAESEAFGLVIKMQKDGECPNSITLVNLLPACSRMASL 395
Query: 450 KTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGEL 484
KTG + + L ++D+ ++ G+L
Sbjct: 396 KTGKQIHAWSIRTGLMFDLFISNALIDMYAKCGQL 430
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 99/375 (26%), Positives = 162/375 (43%), Gaps = 20/375 (5%)
Query: 193 RGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLR--KG 250
R WNS+ SL EA ++ +L R G+ P TF L A A KG
Sbjct: 37 RSAFLWNSLSRALSSASLPTEALLVYNHML-RSGVSPDDRTFPFALHAAAAAAQAHPAKG 95
Query: 251 KEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPN 310
E+HA A+ G +D F G LV Y A+ FDE+ + + F N
Sbjct: 96 LELHAAALRSGHLADVFAGNTLVAFYAACGHAGDARRVFDEMPARDVVSWNSLVSSFLAN 155
Query: 311 VYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIG 370
+A Q M+ + ++ ++ ++ AC G VH ++ G DS V++G
Sbjct: 156 KMFDDARQALLSMMRSGVPVNVASLVSVVPACGVEQEGGFGLGVHGLVLKTGLDSIVNLG 215
Query: 371 TALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFR 430
ALVDMY K G ++ + ++ + + VS N+ + + G + +A FR + GF
Sbjct: 216 NALVDMYGKFGHVEASMKVFEGMPERNEVSWNSAIGCFLNAGLYGDVLALFRGMSERGFM 275
Query: 431 PDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKH----YTCMVDLLSRAGELGE 486
P I+ S L A V G G E Y +K +++ +VD+ ++ G L +
Sbjct: 276 PGSITLSSLLPALVELGYFDLGREVHG----YSIKRAMELDIFVANSLVDMYAKFGSLEK 331
Query: 487 AYEFIKKIPMAPDSVMWGALLGGCVSHG--NLEFGQIAADRLIELEPNNT-GNYVMLANL 543
A +KI + + V W A++ V +G + FG + I+++ + N + L NL
Sbjct: 332 ACAVFEKIEVR-NVVSWNAMIANLVQNGAESEAFGLV-----IKMQKDGECPNSITLVNL 385
Query: 544 FAYAGRWSDLARTRQ 558
R + L +Q
Sbjct: 386 LPACSRMASLKTGKQ 400
>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
pumila]
Length = 710
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 181/547 (33%), Positives = 295/547 (53%), Gaps = 10/547 (1%)
Query: 55 ETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGK 114
+ P L+ W+ + G + A+ + M + GL PN+ T +L +CA+ G+
Sbjct: 64 QEPXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEGQ 123
Query: 115 EFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
+ HG + + GF + ++ L+ +Y + G + A K+ K S ++ VS +I GY G
Sbjct: 124 QLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRG 183
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTF 234
+ A ++FD++ + ++SWN+ ISGY + Y EA +F+ + M+ + P T
Sbjct: 184 XIESAHKMFDEIP----VKDVVSWNAXISGYAETGNYKEALELFKKM-MKTNVRPDESTM 238
Query: 235 GSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIEN 294
+VL ACA S+ G+++H+ G + + AL+++Y + +L A F + N
Sbjct: 239 VTVLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSN 298
Query: 295 IENLLGKMKEDGF-EPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ 353
+ + G+ N+Y A+ LF +ML P+ T+ ILSAC+ L ++ G+
Sbjct: 299 KDVISWNTLIGGYTHMNLYK-EALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRW 357
Query: 354 VHAYAIR--CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMH 411
+H Y + G + + T+L+DMYAKCG ++ A+ + + L S NAM+ +AMH
Sbjct: 358 IHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMH 417
Query: 412 GHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKH 470
G F R+ +G PD I+F+ LSAC H+G + G F M Y + P L+H
Sbjct: 418 GRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTRDYKLMPKLEH 477
Query: 471 YTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELE 530
Y CM+DL +G EA + I + M PD V+W +LL C HGN+E G+ A LI++E
Sbjct: 478 YGCMIDLXGHSGLFKEAEKMINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIE 537
Query: 531 PNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSH 590
P N G+YV+L+N++A A RW+++A+TR + D+ M K PGCS IE +H+F D+ H
Sbjct: 538 PENPGSYVLLSNIYATAERWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFH 597
Query: 591 DRSEEIY 597
R+ EIY
Sbjct: 598 PRNREIY 604
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 124/436 (28%), Positives = 208/436 (47%), Gaps = 59/436 (13%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY + G L+DA+KV RD VS+ +++T A+ G + A + + + D +V
Sbjct: 147 MYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRGXIESAHKMFDEIPVKD-----VV 201
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A I G+ + G +EA+ + +M + P+ T+ +VL ACA+ + LG++ H +I
Sbjct: 202 SWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQSGSIELGRQVHSWI 261
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+GF N +VN L+D+Y +CG++ +A +F S K+ +S NT+I GY
Sbjct: 262 NDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVISWNTLIGGYT--------- 312
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
H+ +LY EA +F+D+L R G +P T S+L A
Sbjct: 313 -------HM-------------------NLYKEALLLFQDML-RSGEKPNDVTMLSILSA 345
Query: 241 CADMNSLRKGKEIHALAIAL--GLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
CA + ++ G+ IH G+ + + + +L++MY + D+ AAQ FD + N
Sbjct: 346 CAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLS 405
Query: 299 LGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYA 358
GF + A +FS M + PD T +LSACS ++ G+ +
Sbjct: 406 SWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSM 465
Query: 359 IRCGYDSDV-----HIGTALVDMYAKCGSLKHARLAYKRIST----PDLVSQNAMLTAYA 409
R D + H G ++D+ G K A K I+T PD V ++L A
Sbjct: 466 TR---DYKLMPKLEHYG-CMIDLXGHSGLFKEAE---KMINTMEMEPDGVIWCSLLKACK 518
Query: 410 MHGHGKEGIAHFRRIL 425
MHG+ + G ++ + ++
Sbjct: 519 MHGNVELGESYAQNLI 534
>gi|15234095|ref|NP_195043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206840|sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170
gi|4455331|emb|CAB36791.1| putative protein [Arabidopsis thaliana]
gi|7270265|emb|CAB80034.1| putative protein [Arabidopsis thaliana]
gi|332660786|gb|AEE86186.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 990
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 178/542 (32%), Positives = 294/542 (54%), Gaps = 39/542 (7%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARL-QKLSLGKEF 116
+L+SW++VI G QNG + EA+ + ++ GL+P+ T++SVL A + L + LSL K+
Sbjct: 380 DLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQV 439
Query: 117 HGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNV 176
H + + +S+ FV L+D Y R N +
Sbjct: 440 HVHAIKINNVSDSFVSTALIDAYSR-------------------------------NRCM 468
Query: 177 AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGS 236
EA LF++ +++WN+M++GY + + +F L+ + G FT +
Sbjct: 469 KEAEILFERHNF-----DLVAWNAMMAGYTQSHDGHKTLKLFA-LMHKQGERSDDFTLAT 522
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
V C + ++ +GK++HA AI G D +V +++MY + D+ AAQ AFD I +
Sbjct: 523 VFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPD 582
Query: 297 NLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHA 356
++ G N A +FS+M + + PD +T+ + A S L +E+G+Q+HA
Sbjct: 583 DVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHA 642
Query: 357 YAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKE 416
A++ +D +GT+LVDMYAKCGS+ A +KRI ++ + NAML A HG GKE
Sbjct: 643 NALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKE 702
Query: 417 GIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMV 475
+ F+++ + G +PD ++F+ LSAC H+G + + M Y +KP ++HY+C+
Sbjct: 703 TLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLA 762
Query: 476 DLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTG 535
D L RAG + +A I+ + M + M+ LL C G+ E G+ A +L+ELEP ++
Sbjct: 763 DALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSS 822
Query: 536 NYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEE 595
YV+L+N++A A +W ++ R MK ++ K PG SWIE +++IH F DRS+ ++E
Sbjct: 823 AYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTEL 882
Query: 596 IY 597
IY
Sbjct: 883 IY 884
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 155/581 (26%), Positives = 252/581 (43%), Gaps = 95/581 (16%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGSL A++VF MP+RD VSWNS++ A A ++ EC+ ++N
Sbjct: 83 MYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYA------QSSECV-----VEN------ 125
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNAR-TLSSVLPACARLQKLSLGKEFHGY 119
Q + +LFR+ + + +R TLS +L C + + FHGY
Sbjct: 126 ---------IQQAF------LLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGY 170
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ G + FV LV++Y + G + +F + ++ V N ++ Y E G EA
Sbjct: 171 ACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEA 230
Query: 180 RELFDQMEHLGVQRG----------------------------------IISWNSMISGY 205
+L G+ II N +S Y
Sbjct: 231 IDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEY 290
Query: 206 VDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSD 265
+ + Y F D++ D +E TF +L ++SL G+++H +A+ LGL
Sbjct: 291 LHSGQYSALLKCFADMVESD-VECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLM 349
Query: 266 TFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLS 325
V +L+ MYC+ + A+ FD + + + G N A+ LF ++L
Sbjct: 350 LTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLR 409
Query: 326 LDLTPDIYTVGIILSACSSLAT-MERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLK 384
L PD YT+ +L A SSL + KQVH +AI+ SD + TAL+D Y++ +K
Sbjct: 410 CGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMK 469
Query: 385 HARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSAC- 443
A + ++R DLV+ NAM+ Y G + + F + G R D + + C
Sbjct: 470 EAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCG 528
Query: 444 ----------VHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKK 493
VHA +IK+G YD+ L + ++D+ + G++ A
Sbjct: 529 FLFAINQGKQVHAYAIKSG---------YDL--DLWVSSGILDMYVKCGDMSAAQFAFDS 577
Query: 494 IPMAPDSVMWGALLGGCVSHGNLE--FGQIAADRLIELEPN 532
IP+ PD V W ++ GC+ +G E F + RL+ + P+
Sbjct: 578 IPV-PDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPD 617
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 94/174 (54%)
Query: 56 TPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKE 115
P+ V+W+ +I G +NG +E A + +M+ G+ P+ T++++ A + L L G++
Sbjct: 580 VPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQ 639
Query: 116 FHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGN 175
H + ++PFV LVD+Y +CG + A +F + + N + N ++VG ++G
Sbjct: 640 IHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGE 699
Query: 176 VAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEP 229
E +LF QM+ LG++ +++ ++S + L EA+ R + GI+P
Sbjct: 700 GKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKP 753
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/407 (20%), Positives = 155/407 (38%), Gaps = 68/407 (16%)
Query: 110 LSLGKEFHGYITRNGFMSNP--FVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTII 167
L LGK H I F NP F++N L+ +Y +CG + A ++F K ++ VS N+I+
Sbjct: 55 LMLGKCTHARILT--FEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSIL 112
Query: 168 VGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGI 227
Y ++ V+N +AF +FR +L +D +
Sbjct: 113 AAYAQSSECV----------------------------VEN--IQQAFLLFR-ILRQDVV 141
Query: 228 EPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQM 287
+ T +L C + + H A +GL D FV GALV +Y ++ + ++
Sbjct: 142 YTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKV 201
Query: 288 AFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLAT 347
F+E+ + +L + + + A+ L S S L P+ T+ ++
Sbjct: 202 LFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLL--------- 252
Query: 348 MERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTA 407
A G DSD G +K S +++ +N L+
Sbjct: 253 ----------ARISGDDSDA-------------GQVKSFANGNDASSVSEIIFRNKGLSE 289
Query: 408 YAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPS 467
Y G + F ++ S D ++F+ L+ V S+ G + + +
Sbjct: 290 YLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLM 349
Query: 468 LKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
L ++++ + + G A + D + W +++ G +G
Sbjct: 350 LTVSNSLINMYCKLRKFGFARTVFDNMS-ERDLISWNSVIAGIAQNG 395
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 56/107 (52%), Gaps = 2/107 (1%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGS+DDA +FK + + +WN+++ A +G E L+ ++M SL + P+ V
Sbjct: 662 MYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIK-PDKV 720
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACAR 106
++ V+ + +G EA + M + G++P S + A R
Sbjct: 721 TFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGR 767
>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
Length = 671
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 180/551 (32%), Positives = 299/551 (54%), Gaps = 18/551 (3%)
Query: 55 ETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGK 114
+ PN + W+ +I G + ++ + M + GL PN+ T +L +CA+ + + G+
Sbjct: 25 QEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKSCAKSKTFTEGQ 84
Query: 115 EFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
+ HG + + GF + +V L+ +Y + + A K+F + S ++ VS +I GY G
Sbjct: 85 QIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSYTALITGYASRG 144
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTF 234
++ A++LFD++ + ++SWN+MISGY + Y EA +F ++ M+ + P T+
Sbjct: 145 DIRSAQKLFDEIP----VKDVVSWNAMISGYAETGCYKEALELFEEM-MKMNVRPDESTY 199
Query: 235 GSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAA-----QMAF 289
+VL ACA S+ G+++H+ G S+ + AL+++Y + ++ A +++
Sbjct: 200 VTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLFQGLSY 259
Query: 290 DEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATME 349
++ + L+G N+Y A+ LF EML TP+ T+ +L AC+ L ++
Sbjct: 260 KDVISWNTLIGGYTH----MNLYK-EALLLFQEMLRSGETPNDVTMLSVLPACAHLGAID 314
Query: 350 RGKQVHAYAIR--CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTA 407
G+ +H Y + G + + T+L+DMYAKCG ++ A + + L S NAM+
Sbjct: 315 IGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFG 374
Query: 408 YAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKP 466
+AMHG F R+ G PD I+F+ LSAC H+G + G F M Y + P
Sbjct: 375 FAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTP 434
Query: 467 SLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRL 526
L+HY CM+DLL +G EA E I + M PD V+W +LL C HGN+E + A L
Sbjct: 435 KLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELAESFAQNL 494
Query: 527 IELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRAS 586
I++EP N +Y++L+N++A AGRW D+AR R + + M K PGCS IE + +F
Sbjct: 495 IKIEPENPSSYILLSNIYASAGRWEDVARIRALLNGKCMKKVPGCSSIEVDSVVFEFVVG 554
Query: 587 DRSHDRSEEIY 597
D+ H ++ EIY
Sbjct: 555 DKFHPQNREIY 565
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 118/435 (27%), Positives = 197/435 (45%), Gaps = 81/435 (18%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY + L+DA KVF RD VS+ +++T A+ G + A + + + D +V
Sbjct: 108 MYVQNWRLEDAYKVFDRSSHRDVVSYTALITGYASRGDIRSAQKLFDEIPVKD-----VV 162
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A+I G+ + G +EA+ + M + P+ T +VL ACA + LG++ H ++
Sbjct: 163 SWNAMISGYAETGCYKEALELFEEMMKMNVRPDESTYVTVLSACAHSGSIELGRQVHSWV 222
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+GF SN +VN L+D+Y +CG++ +A +F S K+ +S NT+I GY
Sbjct: 223 DDHGFDSNLKIVNALIDLYSKCGEVETACGLFQGLSYKDVISWNTLIGGY---------- 272
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
H+ +LY EA +F+++L R G P T SVL A
Sbjct: 273 ------THM-------------------NLYKEALLLFQEML-RSGETPNDVTMLSVLPA 306
Query: 241 CADMNSLRKGKEIHALAIAL--GLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
CA + ++ G+ IH G+ + + + +L++MY + D+ AA F+ +
Sbjct: 307 CAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSM------ 360
Query: 299 LGKMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSS 344
++ +WNAM LFS M + + PD T +LSACS
Sbjct: 361 --------LHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSH 412
Query: 345 LATMERGKQV-----HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST-PDL 398
++ G+ + Y + + H G ++D+ G K A + PD
Sbjct: 413 SGMLDLGRHIFRSMTQDYKMTPKLE---HYG-CMIDLLGHSGLFKEAEEMINTMEMEPDG 468
Query: 399 VSQNAMLTAYAMHGH 413
V ++L A MHG+
Sbjct: 469 VIWCSLLKACKMHGN 483
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 115/464 (24%), Positives = 206/464 (44%), Gaps = 94/464 (20%)
Query: 148 ALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVD 207
A +F N++ NT+I G+ + + + L+ M LG+
Sbjct: 17 ATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLL--------------- 61
Query: 208 NSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTF 267
P S+TF +L +CA + +G++IH + LG D +
Sbjct: 62 ---------------------PNSYTFPFLLKSCAKSKTFTEGQQIHGQVLKLGFDLDLY 100
Query: 268 VGGALVEMYCRYQDLVAAQMAFD---------------------EIENIENLLGKMKEDG 306
V +L+ MY + L A FD +I + + L ++
Sbjct: 101 VHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSYTALITGYASRGDIRSAQKLFDEIPVK- 159
Query: 307 FEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGK 352
+V +WNAM +LF EM+ +++ PD T +LSAC+ ++E G+
Sbjct: 160 ---DVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPDESTYVTVLSACAHSGSIELGR 216
Query: 353 QVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHG 412
QVH++ G+DS++ I AL+D+Y+KCG ++ A ++ +S D++S N ++ Y
Sbjct: 217 QVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLFQGLSYKDVISWNTLIGGYTHMN 276
Query: 413 HGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVK------- 465
KE + F+ +L SG P+ ++ LS L AC H G+I G + Y D +
Sbjct: 277 LYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAIDIGRW---IHVYIDKRLKGVTNA 333
Query: 466 PSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE--FGQIAA 523
SL+ T ++D+ ++ G++ A++ + + W A++ G HG + F +
Sbjct: 334 SSLR--TSLIDMYAKCGDIEAAHQVFNSM-LHKSLSSWNAMIFGFAMHGRADASFDLFSR 390
Query: 524 DRLIELEPNNTGNYVMLANLFAYAGRWSDLART--RQKMKDRRM 565
R I +EP++ +V L + +++G DL R R +D +M
Sbjct: 391 MRKIGIEPDDI-TFVGLLSACSHSGML-DLGRHIFRSMTQDYKM 432
>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
Length = 957
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 192/573 (33%), Positives = 309/573 (53%), Gaps = 43/573 (7%)
Query: 27 NSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQ 86
N+++ A G + EA M D +SW++++ GF QNG EA+ M+
Sbjct: 321 NALIAMYARFGKMGEAANIFYNMDDWDT-----ISWNSMLSGFVQNGLYHEALQFYHEMR 375
Query: 87 AEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDML 146
G +P+ + S++ A AR G + H Y +NG S+ V N LVD+Y
Sbjct: 376 DAGQKPDLVAVISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMY------- 428
Query: 147 SALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYV 206
+KF + C +FD+M + ++SW ++I+G+
Sbjct: 429 ------AKFCSMKYMDC------------------IFDKMP----DKDVVSWTTIIAGHA 460
Query: 207 DNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDT 266
N + A +FR++ + +GI+ S+L+AC+ + + KEIH+ I GL SD
Sbjct: 461 QNGSHSRALELFREVQL-EGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGL-SDL 518
Query: 267 FVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSL 326
+ +V++Y ++ A F+ IE + + + N A++LF M
Sbjct: 519 VLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKET 578
Query: 327 DLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHA 386
+ PD ++ ILSA +SL+ +++GK++H + IR G+ + + + LVDMYA+CG+L+ +
Sbjct: 579 GVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKS 638
Query: 387 RLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHA 446
R + I DLV +M+ AY MHG G+ I FRR+ PDHI+F++ L AC H+
Sbjct: 639 RNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHS 698
Query: 447 GSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGA 505
G + G F + M Y Y ++P +HY C+VDLL RA L EAY+F+K + + P + +W A
Sbjct: 699 GLMNEGRRFLESMKYEYQLEPWPEHYACLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCA 758
Query: 506 LLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRM 565
LLG C H N E G+IAA +L+E++P N GNYV+++N+++ RW D+ R +MK +
Sbjct: 759 LLGACQIHSNKELGEIAAQKLLEMDPENPGNYVLVSNVYSAERRWKDVEXVRMRMKASGL 818
Query: 566 HKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYT 598
K+PGCSWIE +++H F A D+SH +S EIY+
Sbjct: 819 KKNPGCSWIEVGNKVHTFMARDKSHPQSYEIYS 851
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 141/535 (26%), Positives = 228/535 (42%), Gaps = 106/535 (19%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKCG L DA+K+F MP + +WN
Sbjct: 123 MYGKCGCLVDAEKLFDGMPHKTIFTWN--------------------------------- 149
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
A+IG + NG ++ + M+ G+ +A T +L AC L+ G E HG
Sbjct: 150 ---AMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRYGAEVHGLA 206
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G++S FV N +V +Y +C D+ NG AR
Sbjct: 207 IKEGYVSIVFVANSIVGMYTKCNDL---------------------------NG----AR 235
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+LFD+M + ++SWNSMIS Y N EA +F ++ + + P ++TF + L A
Sbjct: 236 QLFDRMPE---KEDVVSWNSMISAYSSNGQSIEALRLFGEM-QKASLAPNTYTFVAALQA 291
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C D + +++G IHA + + FV AL+ MY R+ + A F +++ + +
Sbjct: 292 CEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISW 351
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
GF N A+Q + EM PD+ V I++A + G Q+HAYA++
Sbjct: 352 NSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHGMQIHAYAMK 411
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
G DSD+ +G +LVDMYAK S+K+ + ++ D+VS ++ +A +G +
Sbjct: 412 NGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALEL 471
Query: 421 FRRILASGFRPDHISFLSALSAC-----------VHA----------------------- 446
FR + G D + S L AC +H+
Sbjct: 472 FREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGLSDLVLQNGIVDVYGEC 531
Query: 447 GSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSV 501
G++ + F+L+ + DV +C V A E E + +K+ + PDS+
Sbjct: 532 GNVDYAARMFELIEFKDVVSWTSMISCYVH-NGLANEALELFHLMKETGVEPDSI 585
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 106/420 (25%), Positives = 184/420 (43%), Gaps = 39/420 (9%)
Query: 98 SSVLPACARLQKLSLGKEFHGY-ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFS 156
SSVL C + LS G++ H + IT N ++ F+ LV +Y +CG ++ A K+F
Sbjct: 82 SSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMP 141
Query: 157 IKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFS 216
K + N +I Y NG + EL+ +M
Sbjct: 142 HKTIFTWNAMIGAYVTNGEPLGSLELYREMR----------------------------- 172
Query: 217 MFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMY 276
GI + TF +L AC + R G E+H LAI G S FV ++V MY
Sbjct: 173 -------VSGIPLDACTFPCILKACGLLKDRRYGAEVHGLAIKEGYVSIVFVANSIVGMY 225
Query: 277 CRYQDLVAAQMAFDEIENIENLLG-KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTV 335
+ DL A+ FD + E+++ + N + A++LF EM L P+ YT
Sbjct: 226 TKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTF 285
Query: 336 GIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST 395
L AC + +++G +HA ++ Y +V + AL+ MYA+ G + A + +
Sbjct: 286 VAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDD 345
Query: 396 PDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEF 455
D +S N+ML+ + +G E + + + +G +PD ++ +S ++A +G+ G +
Sbjct: 346 WDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHGMQI 405
Query: 456 FDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
+ L+ +VD+ ++ + K+P D V W ++ G +G+
Sbjct: 406 HAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMP-DKDVVSWTTIIAGHAQNGS 464
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 147/323 (45%), Gaps = 37/323 (11%)
Query: 212 DEAFSMFRDLLMRDGIEPTSFT----FGSVLIACADMNSLRKGKEIHALAI-ALGLQSDT 266
+EAF DL P+ F+ + SVL C +L +G+++HA I + L +
Sbjct: 57 NEAFQSLTDLFANQS--PSQFSLDEAYSSVLELCGSKKALSEGQQVHAHMITSNALFNSV 114
Query: 267 FVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAM--------- 317
F+ LV MY + LV A+ FD + + ++TWNAM
Sbjct: 115 FLSTRLVFMYGKCGCLVDAEKLFDGMPH--------------KTIFTWNAMIGAYVTNGE 160
Query: 318 -----QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTA 372
+L+ EM + D T IL AC L G +VH AI+ GY S V + +
Sbjct: 161 PLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRYGAEVHGLAIKEGYVSIVFVANS 220
Query: 373 LVDMYAKCGSLKHARLAYKRI-STPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRP 431
+V MY KC L AR + R+ D+VS N+M++AY+ +G E + F + + P
Sbjct: 221 IVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAP 280
Query: 432 DHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFI 491
+ +F++AL AC + IK G + ++ ++ + +R G++GEA
Sbjct: 281 NTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIF 340
Query: 492 KKIPMAPDSVMWGALLGGCVSHG 514
+ D++ W ++L G V +G
Sbjct: 341 YNMD-DWDTISWNSMLSGFVQNG 362
>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 781
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 183/602 (30%), Positives = 319/602 (52%), Gaps = 29/602 (4%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y + G + A+K+F MPERD VSWN ++ N + +A E E M D + S
Sbjct: 105 YLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERD-----VCS 159
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W+ ++ G+ QNG ++A + RM E N + +++L A + K+
Sbjct: 160 WNTMLSGYAQNGCVDDARSVFDRMP----EKNDVSWNALLSAYVQNSKMEEACMLFKSRE 215
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
+S ++ G V + ++ A + F ++++ VS NTII GY ++G + EAR+
Sbjct: 216 NWALVSWNCLLGGFVKKKK----IVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQ 271
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
LFD+ + + +W +M+SGY+ N + +EA +F + R+ + ++ ++L
Sbjct: 272 LFDE----SPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEV-----SWNAMLAGY 322
Query: 242 ADMNSLRKGKEIHALAIALGLQS-DTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
+ KE+ + + + +T + G Y + + A+ FD++ + +
Sbjct: 323 VQGERMEMAKELFDVMPCRNVSTWNTMITG-----YAQCGKISEAKNLFDKMPKRDPVSW 377
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G+ + +++ A++LF +M + + LS C+ + +E GKQ+H ++
Sbjct: 378 AAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVK 437
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
GY++ +G AL+ MY KCGS++ A +K ++ D+VS N M+ Y+ HG G+ +
Sbjct: 438 GGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRF 497
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLS 479
F + G +PD + ++ LSAC H G + G ++F M Y V P+ +HY CMVDLL
Sbjct: 498 FESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLG 557
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
RAG L +A+ +K +P PD+ +WG LLG HGN E + AAD++ +EP N+G YV+
Sbjct: 558 RAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVL 617
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTI 599
L+NL+A +GRW D+ + R +M+D+ + K PG SWIE +++ H F D H +EI+
Sbjct: 618 LSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAF 677
Query: 600 ID 601
++
Sbjct: 678 LE 679
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 105/440 (23%), Positives = 183/440 (41%), Gaps = 63/440 (14%)
Query: 133 NGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQ 192
N + Y R G AL++F + + VS N +I GY NG AR+LFD+M +
Sbjct: 68 NVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMP----E 123
Query: 193 RGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACAD-----MNSL 247
R ++SWN MI GYV N +A +F + RD + G C D + +
Sbjct: 124 RDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRM 183
Query: 248 RKGKEIHALAIALGLQSDTFV-----------GGALVEMYC------RYQDLVAAQMAFD 290
+ ++ A+ ++ + ALV C + + +V A+ FD
Sbjct: 184 PEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFD 243
Query: 291 EIENIENLL------------GKMKE------DGFEPNVYTWNAM-------QLFSEMLS 325
+ N+ +++ GK+ E + +V+TW AM ++ E
Sbjct: 244 SM-NVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARE 302
Query: 326 L-DLTPDIYTV--GIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGS 382
L D P+ V +L+ ME K++ + C +V ++ YA+CG
Sbjct: 303 LFDKMPERNEVSWNAMLAGYVQGERMEMAKELFD-VMPC---RNVSTWNTMITGYAQCGK 358
Query: 383 LKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSA 442
+ A+ + ++ D VS AM+ Y+ GH E + F ++ G R + SF SALS
Sbjct: 359 ISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALST 418
Query: 443 CVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVM 502
C +++ G + + + ++ + + G + EA + K++ D V
Sbjct: 419 CADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMA-GKDIVS 477
Query: 503 WGALLGGCVSHGNLEFGQIA 522
W ++ G HG FG++A
Sbjct: 478 WNTMIAGYSRHG---FGEVA 494
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 83/188 (44%), Gaps = 38/188 (20%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGS+++A +FK M +D VSWN+
Sbjct: 453 MYCKCGSIEEANDLFKEMAGKDIVSWNT-------------------------------- 480
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+I G++++G+ E A+ M+ EGL+P+ T+ +VL AC+ + G+++ +
Sbjct: 481 ----MIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTM 536
Query: 121 TRN-GFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCE-NGNVAE 178
T++ G M N +VD+ R G + A + + + + ++G +GN
Sbjct: 537 TQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTEL 596
Query: 179 ARELFDQM 186
A D++
Sbjct: 597 AETAADKI 604
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 66/159 (41%), Gaps = 10/159 (6%)
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGI 418
++CG DSD+ + Y + G A +KR+ VS N M++ Y +G
Sbjct: 57 LKCG-DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGE----F 111
Query: 419 AHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLL 478
R++ D +S+ + V ++ E F++M DV + M+
Sbjct: 112 ELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCS----WNTMLSGY 167
Query: 479 SRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
++ G + +A ++P D V W ALL V + +E
Sbjct: 168 AQNGCVDDARSVFDRMPEKND-VSWNALLSAYVQNSKME 205
>gi|297816638|ref|XP_002876202.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322040|gb|EFH52461.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 769
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 204/682 (29%), Positives = 326/682 (47%), Gaps = 132/682 (19%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNS-------------------------------- 28
MYGKCGSL DA++VF MPER+ VS+ S
Sbjct: 108 MYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQEAEAITLYLKMLQADLVPDQFA 167
Query: 29 ---VVTACAANGLVLEALECLERMSSLDNET----------------------------- 56
++ ACA G V+ + ++ L++ +
Sbjct: 168 FGSIIKACACAGDVVLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASKVFYGIP 227
Query: 57 -PNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGL-EPNARTLSSVLPACARLQKLSLGK 114
+L+SWS++I GF+Q G++ EA+ L M + G+ PN S L AC+ L + G
Sbjct: 228 AKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGS 287
Query: 115 EFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
+ HG + N L D+Y RCG + SA
Sbjct: 288 QIHGLCIKLELTGNAIAGCSLCDMYARCGFLDSA-------------------------- 321
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRD-GIEPTSFT 233
R +F+Q+E + SWN +I+G +N DEA S+F + MR+ G P + +
Sbjct: 322 -----RRVFNQIE----RPDTASWNVIIAGLANNGYADEAVSVFSE--MRNSGFIPDAIS 370
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
S+L A +L +G +IH+ I G +D V +L+ MY DL F++
Sbjct: 371 LRSLLCAQTKPMALCQGMQIHSFIIKCGFLADLSVCNSLLTMYTFCSDLYCCFNLFEDFR 430
Query: 294 NIENLLGKMKEDGFEPNVYTWNA--------------MQLFSEMLSLDLTPDIYTVGIIL 339
N + + +WNA ++LF ML + PD T+G +L
Sbjct: 431 N-------------KADSVSWNAILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLL 477
Query: 340 SACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLV 399
C +++++ G QVH Y+ + G + I L+DMYAKCGSL+ AR + + D+V
Sbjct: 478 RGCVEISSLKLGSQVHCYSWKTGLVLEQFIKNGLIDMYAKCGSLRQARRIFDSMDNGDVV 537
Query: 400 SQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM 459
S + ++ YA G G+E + FR + +SG P+H++F+ L+AC H G ++ G + + +M
Sbjct: 538 SWSTLIVGYAQSGFGEEALILFREMKSSGIEPNHVTFVGVLTACSHVGLVEEGLKLYAIM 597
Query: 460 -AYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEF 518
+ + P+ +H +C+VDLL+RAG L EA FI ++ + PD V+W LL C + GN++
Sbjct: 598 QTEHGISPTKEHCSCVVDLLARAGHLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVDL 657
Query: 519 GQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRD 578
Q AA+ +++++P N+ +V+L ++ A +G W D A R MK + K PG SWI+ D
Sbjct: 658 AQKAAENILKIDPFNSTAHVLLCSMHASSGNWEDAALLRSSMKKHDVKKIPGQSWIDVED 717
Query: 579 EIHKFRASDRSHDRSEEIYTII 600
+IH F A D H ++IYT++
Sbjct: 718 KIHIFFAEDVLHPERDDIYTVL 739
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 117/450 (26%), Positives = 192/450 (42%), Gaps = 38/450 (8%)
Query: 66 IGGFTQNGYDEEAIGML-FRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNG 124
I +N + EA+ F + + RT S++ AC+ + L+ G++ H +I +
Sbjct: 35 INSLCRNSFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSN 94
Query: 125 FMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFD 184
+ + N ++ +Y +CG + A ++F +N VS ++I GY +NG AEA L+
Sbjct: 95 CKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQEAEAITLYL 154
Query: 185 QMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADM 244
+M ++ + P F FGS++ ACA
Sbjct: 155 KM------------------------------------LQADLVPDQFAFGSIIKACACA 178
Query: 245 NSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKE 304
+ GK++HA I L S AL+ MY R+ + A F I + +
Sbjct: 179 GDVVLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASKVFYGIPAKDLISWSSII 238
Query: 305 DGFEPNVYTWNAMQLFSEMLSLDL-TPDIYTVGIILSACSSLATMERGKQVHAYAIRCGY 363
GF + + A+ EMLS + P+ Y G L ACSSL + G Q+H I+
Sbjct: 239 AGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKLEL 298
Query: 364 DSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRR 423
+ G +L DMYA+CG L AR + +I PD S N ++ A +G+ E ++ F
Sbjct: 299 TGNAIAGCSLCDMYARCGFLDSARRVFNQIERPDTASWNVIIAGLANNGYADEAVSVFSE 358
Query: 424 ILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGE 483
+ SGF PD IS S L A ++ G + + L ++ + + +
Sbjct: 359 MRNSGFIPDAISLRSLLCAQTKPMALCQGMQIHSFIIKCGFLADLSVCNSLLTMYTFCSD 418
Query: 484 LGEAYEFIKKIPMAPDSVMWGALLGGCVSH 513
L + + DSV W A+L C+ H
Sbjct: 419 LYCCFNLFEDFRNKADSVSWNAILTACLQH 448
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 143/318 (44%), Gaps = 4/318 (1%)
Query: 199 NSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAI 258
N I+ NS Y EA F + T+ S++ AC+ SL +G++IH +
Sbjct: 32 NDHINSLCRNSFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHIL 91
Query: 259 ALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKE-DGFEPNVYTWNAM 317
+ DT + ++ MY + L A+ FD + NL+ G+ N A+
Sbjct: 92 NSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPE-RNLVSYTSVITGYSQNGQEAEAI 150
Query: 318 QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMY 377
L+ +ML DL PD + G I+ AC+ + GKQ+HA I+ S + AL+ MY
Sbjct: 151 TLYLKMLQADLVPDQFAFGSIIKACACAGDVVLGKQLHAQVIKLESSSHLIAQNALIAMY 210
Query: 378 AKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASG-FRPDHISF 436
+ + A + I DL+S ++++ ++ G E ++H + +L+ G F P+ F
Sbjct: 211 VRFNQMSDASKVFYGIPAKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIF 270
Query: 437 LSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPM 496
S+L AC GS+ L ++ + + D+ +R G L A +I
Sbjct: 271 GSSLKACSSLLRPDYGSQIHGLCIKLELTGNAIAGCSLCDMYARCGFLDSARRVFNQIE- 329
Query: 497 APDSVMWGALLGGCVSHG 514
PD+ W ++ G ++G
Sbjct: 330 RPDTASWNVIIAGLANNG 347
>gi|356495419|ref|XP_003516575.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Glycine max]
Length = 666
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 183/523 (34%), Positives = 277/523 (52%), Gaps = 39/523 (7%)
Query: 59 LVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHG 118
++SW+ +I G+ +N E+A+ + RM G+EP+ T+ SVLPAC L+ + LG+E H
Sbjct: 179 VISWNTMINGYFRNNCAEDAVNVYGRMMDVGVEPDCATVVSVLPACGLLKNVELGREVHT 238
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
+ GF N V N LVD+Y +CG M E
Sbjct: 239 LVQEKGFWGNIVVRNALVDMYVKCGQM-------------------------------KE 267
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
A L M+ + +++W ++I+GY+ N A M ++ +G++P S + S+L
Sbjct: 268 AWLLAKGMD----DKDVVTWTTLINGYILNGDARSAL-MLCGMMQCEGVKPNSVSIASLL 322
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
AC + L GK +HA AI ++S+ V AL+ MY + + F
Sbjct: 323 SACGSLVYLNHGKCLHAWAIRQKIESEVIVETALINMYAKCNCGNLSYKVFMGTSKKRTA 382
Query: 299 LGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYA 358
GF N A++LF +ML D+ PD T +L A + LA +++ +H Y
Sbjct: 383 PWNALLSGFIQNRLAREAIELFKQMLVKDVQPDHATFNSLLPAYAILADLQQAMNIHCYL 442
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPD--LVSQNAMLTAYAMHGHGKE 416
IR G+ + + + LVD+Y+KCGSL +A + IS D ++ +A++ AY HGHGK
Sbjct: 443 IRSGFLYRLEVASILVDIYSKCGSLGYAHQIFNIISLKDKDIIIWSAIIAAYGKHGHGKM 502
Query: 417 GIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMV 475
+ F +++ SG +P+H++F S L AC HAG + G F+ M + + + HYTCM+
Sbjct: 503 AVKLFNQMVQSGVKPNHVTFTSVLHACSHAGLVNEGFSLFNFMLKQHQIISHVDHYTCMI 562
Query: 476 DLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTG 535
DLL RAG L +AY I+ +P+ P+ +WGALLG CV H N+E G++AA +LEP NTG
Sbjct: 563 DLLGRAGRLNDAYNLIRTMPITPNHAVWGALLGACVIHENVELGEVAARWTFKLEPENTG 622
Query: 536 NYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRD 578
NYV+LA L+A GRW D R R + + + K P S IE RD
Sbjct: 623 NYVLLAKLYAAVGRWGDAERVRDMVNEVGLRKLPAHSLIEVRD 665
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 149/304 (49%), Gaps = 9/304 (2%)
Query: 140 RRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWN 199
+R ++ L IFS ++ C+ + Y + + + A LFD++ Q + SWN
Sbjct: 31 KRLHALILTLGIFSSSNL-----CSKLATTYAQCHHASYASHLFDKLS----QPCLFSWN 81
Query: 200 SMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIA 259
+M+ YV +A ++F ++L P FT+ V+ AC D++ + G IH
Sbjct: 82 AMMRMYVQIGRPFDALNLFVEMLGSGRTLPDKFTYPVVIKACGDLSLIDVGVGIHGQTFK 141
Query: 260 LGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQL 319
G SDTFV L+ MY + AAQ+ FD ++ + +G+ N +A+ +
Sbjct: 142 FGYDSDTFVQNTLLAMYMNAGEKEAAQLVFDPMQERTVISWNTMINGYFRNNCAEDAVNV 201
Query: 320 FSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAK 379
+ M+ + + PD TV +L AC L +E G++VH G+ ++ + ALVDMY K
Sbjct: 202 YGRMMDVGVEPDCATVVSVLPACGLLKNVELGREVHTLVQEKGFWGNIVVRNALVDMYVK 261
Query: 380 CGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSA 439
CG +K A L K + D+V+ ++ Y ++G + + + G +P+ +S S
Sbjct: 262 CGQMKEAWLLAKGMDDKDVVTWTTLINGYILNGDARSALMLCGMMQCEGVKPNSVSIASL 321
Query: 440 LSAC 443
LSAC
Sbjct: 322 LSAC 325
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 88/358 (24%), Positives = 156/358 (43%), Gaps = 40/358 (11%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
++V+W+ +I G+ NG A+ + MQ EG++PN+ +++S+L AC L L+ GK H
Sbjct: 279 DVVTWTTLINGYILNGDARSALMLCGMMQCEGVKPNSVSIASLLSACGSLVYLNHGKCLH 338
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
+ R S V L+++Y +C + K+F S K N ++ G+ +N
Sbjct: 339 AWAIRQKIESEVIVETALINMYAKCNCGNLSYKVFMGTSKKRTAPWNALLSGFIQNRLAR 398
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
EA ELF QM L++D ++P TF S+
Sbjct: 399 EAIELFKQM-----------------------------------LVKD-VQPDHATFNSL 422
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFD--EIENI 295
L A A + L++ IH I G V LV++Y + L A F+ +++
Sbjct: 423 LPAYAILADLQQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHQIFNIISLKDK 482
Query: 296 ENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVH 355
+ ++ + + + A++LF++M+ + P+ T +L ACS + G +
Sbjct: 483 DIIIWSAIIAAYGKHGHGKMAVKLFNQMVQSGVKPNHVTFTSVLHACSHAGLVNEGFSLF 542
Query: 356 AYAIRC-GYDSDVHIGTALVDMYAKCGSLKHA-RLAYKRISTPDLVSQNAMLTAYAMH 411
+ ++ S V T ++D+ + G L A L TP+ A+L A +H
Sbjct: 543 NFMLKQHQIISHVDHYTCMIDLLGRAGRLNDAYNLIRTMPITPNHAVWGALLGACVIH 600
Score = 46.2 bits (108), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 1/107 (0%)
Query: 338 ILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPD 397
+L S+ + K++HA + G S ++ + L YA+C +A + ++S P
Sbjct: 17 LLGKFSASQSHSETKRLHALILTLGIFSSSNLCSKLATTYAQCHHASYASHLFDKLSQPC 76
Query: 398 LVSQNAMLTAYAMHGHGKEGIAHFRRILASGFR-PDHISFLSALSAC 443
L S NAM+ Y G + + F +L SG PD ++ + AC
Sbjct: 77 LFSWNAMMRMYVQIGRPFDALNLFVEMLGSGRTLPDKFTYPVVIKAC 123
>gi|356553819|ref|XP_003545249.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Glycine max]
Length = 608
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 185/549 (33%), Positives = 296/549 (53%), Gaps = 39/549 (7%)
Query: 57 PNLVSWSAVIGGFTQNGYDEE-AIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKE 115
PN +++ +I T + A+ + RM + L PN T +CA L LS +
Sbjct: 78 PNDYAFNIMIRALTTTWHHYPLALTLFHRMMSLSLSPNNFTFPFFFLSCANLAVLSPARA 137
Query: 116 FHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGN 175
H + + S+P + L+ +Y RCG
Sbjct: 138 AHSLVFKLALHSDPHTTHSLITMYSRCG-------------------------------R 166
Query: 176 VAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFG 235
VA AR++FD++ +R ++SWNSMI+GY EA +F ++ RDG EP +
Sbjct: 167 VAFARKVFDEIP----RRDLVSWNSMIAGYAKAGCAREAVEVFGEMGRRDGFEPDEMSLV 222
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
SVL AC ++ L G+ + + G+ ++++G AL+ MY + DL +A+ FD +
Sbjct: 223 SVLGACGELGDLELGRWVEGFVVERGMTLNSYIGSALISMYAKCGDLGSARRIFDGMAAR 282
Query: 296 ENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVH 355
+ + G+ N A+ LF M +T + T+ +LSAC+++ ++ GKQ+
Sbjct: 283 DVITWNAVISGYAQNGMADEAISLFHAMKEDCVTENKITLTAVLSACATIGALDLGKQID 342
Query: 356 AYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGK 415
YA + G+ D+ + TAL+DMYAKCGSL A+ +K + + S NAM++A A HG K
Sbjct: 343 EYASQRGFQHDIFVATALIDMYAKCGSLASAQRVFKEMPQKNEASWNAMISALASHGKAK 402
Query: 416 EGIAHFRRIL--ASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYT 472
E ++ F+ + G RP+ I+F+ LSACVHAG + G FD+M+ + + P ++HY+
Sbjct: 403 EALSLFQCMSDEGGGARPNDITFVGLLSACVHAGLVNEGYRLFDMMSTLFGLVPKIEHYS 462
Query: 473 CMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPN 532
CMVDLL+RAG L EA++ I+K+P PD V GALLG C S N++ G+ ++E++P+
Sbjct: 463 CMVDLLARAGHLYEAWDLIEKMPEKPDKVTLGALLGACRSKKNVDIGERVIRMILEVDPS 522
Query: 533 NTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDR 592
N+GNY++ + ++A W D AR R M+ + + K+PGCSWIE + +H+F A D
Sbjct: 523 NSGNYIISSKIYANLNMWEDSARMRLLMRQKGITKTPGCSWIEVENHLHEFHAGDGLCLD 582
Query: 593 SEEIYTIID 601
S ++ IID
Sbjct: 583 SIDLSNIID 591
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 118/425 (27%), Positives = 171/425 (40%), Gaps = 103/425 (24%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +CG + A+KVF +P RD VSWNS++ A G EA+E M D
Sbjct: 160 MYSRCGRVAFARKVFDEIPRRDLVSWNSMIAGYAKAGCAREAVEVFGEMGRRD------- 212
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
G EP+ +L SVL AC L L LG+ G++
Sbjct: 213 ----------------------------GFEPDEMSLVSVLGACGELGDLELGRWVEGFV 244
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
G N ++ + L+ +Y +CGD+ SA +IF + ++ ++ N +I GY +NG EA
Sbjct: 245 VERGMTLNSYIGSALISMYAKCGDLGSARRIFDGMAARDVITWNAVISGYAQNGMADEAI 304
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LF M+ D + T +VL A
Sbjct: 305 SLFHAMK------------------------------------EDCVTENKITLTAVLSA 328
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA + +L GK+I A G Q D FV AL++MY + L +AQ F E+
Sbjct: 329 CATIGALDLGKQIDEYASQRGFQHDIFVATALIDMYAKCGSLASAQRVFKEMP------- 381
Query: 301 KMKEDGFEPNVYTWNAM--QLFS-----EMLSL---------DLTPDIYTVGIILSACSS 344
+ N +WNAM L S E LSL P+ T +LSAC
Sbjct: 382 -------QKNEASWNAMISALASHGKAKEALSLFQCMSDEGGGARPNDITFVGLLSACVH 434
Query: 345 LATMERGKQVH-AYAIRCGYDSDVHIGTALVDMYAKCGSLKHA-RLAYKRISTPDLVSQN 402
+ G ++ + G + + +VD+ A+ G L A L K PD V+
Sbjct: 435 AGLVNEGYRLFDMMSTLFGLVPKIEHYSCMVDLLARAGHLYEAWDLIEKMPEKPDKVTLG 494
Query: 403 AMLTA 407
A+L A
Sbjct: 495 ALLGA 499
>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 891
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 193/601 (32%), Positives = 314/601 (52%), Gaps = 51/601 (8%)
Query: 5 CGSLDDAKKV----FKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETP--N 58
CG+L D +K+ FK+ WN V A + + R SL ++ P +
Sbjct: 228 CGTLVDGRKIHCWAFKL-----GFQWNVFVAASLIHMYSRFGFTGIAR--SLFDDMPFRD 280
Query: 59 LVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHG 118
+ SW+A+I G QNG +A+ +L M+ EG++ N T+ S+LP C +L +S H
Sbjct: 281 MGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHL 340
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
Y+ ++G + FV N L+++Y +KF GN+ +
Sbjct: 341 YVIKHGLEFDLFVSNALINMY-------------AKF------------------GNLED 369
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
AR+ F QM ++SWNS+I+ Y N A F + + +G +P T S+
Sbjct: 370 ARKAFQQM----FITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQL-NGFQPDLLTLVSLA 424
Query: 239 IACADMNSLRKGKEIHALAIALG-LQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
A + + +H + G L D +G A+V+MY + L +A F+ I +
Sbjct: 425 SIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVKDV 484
Query: 298 LLGKMKEDGFEPNVYTWNAMQLFSEMLSL-DLTPDIYTVGIILSACSSLATMERGKQVHA 356
+ G+ N A++++ M ++ P+ T IL A + + +++G ++H
Sbjct: 485 ISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHG 544
Query: 357 YAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKE 416
I+ DV + T L+D+Y KCG L A + ++ V+ NA+++ + +HGH ++
Sbjct: 545 RVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEK 604
Query: 417 GIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVD 476
+ F +L G +PDH++F+S LSAC H+G ++ G F LM Y +KPSLKHY CMVD
Sbjct: 605 TLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGCMVD 664
Query: 477 LLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGN 536
LL RAG L AY+FIK +P+ PD+ +WGALLG C HGN+E G+ A+DRL E++ N G
Sbjct: 665 LLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGY 724
Query: 537 YVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEI 596
YV+L+N++A G+W + + R ++R + K+PG S IE ++ F ++SH + +EI
Sbjct: 725 YVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEI 784
Query: 597 Y 597
Y
Sbjct: 785 Y 785
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 111/402 (27%), Positives = 189/402 (47%), Gaps = 15/402 (3%)
Query: 170 YCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEP 229
Y G+V+ +R FDQ+ Q+ + +WNSMIS YV N + EA F LL+ I P
Sbjct: 161 YANLGDVSLSRCTFDQIP----QKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRP 216
Query: 230 TSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAF 289
+TF VL AC +L G++IH A LG Q + FV +L+ MY R+ A+ F
Sbjct: 217 DFYTFPPVLKACG---TLVDGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLF 273
Query: 290 DEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATME 349
D++ + G N A+ + EM + + TV IL C L +
Sbjct: 274 DDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDIS 333
Query: 350 RGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYA 409
+H Y I+ G + D+ + AL++MYAK G+L+ AR A++++ D+VS N+++ AY
Sbjct: 334 TAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYE 393
Query: 410 MHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFD-LMAYYDVKPSL 468
+ F ++ +GF+PD ++ +S S + K +M + +
Sbjct: 394 QNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDV 453
Query: 469 KHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLI- 527
+VD+ ++ G L A++ + IP+ D + W L+ G +G L I +++
Sbjct: 454 VIGNAVVDMYAKLGLLDSAHKVFEIIPVK-DVISWNTLITGYAQNG-LASEAIEVYKMME 511
Query: 528 ---ELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMH 566
E+ PN G +V + +A+ G + ++ +H
Sbjct: 512 ECKEIIPNQ-GTWVSILPAYAHVGALQQGMKIHGRVIKTNLH 552
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 115/433 (26%), Positives = 176/433 (40%), Gaps = 101/433 (23%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G+L+DA+K F+ M D VSWNS++ A
Sbjct: 360 MYAKFGNLEDARKAFQQMFITDVVSWNSIIAA---------------------------- 391
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+ QN A G +MQ G +P+ TL S+ A+ + + HG+I
Sbjct: 392 --------YEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFI 443
Query: 121 TRNGFMSNPFVV-NGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
R G++ V+ N +VD+Y + G + SA K+F +K+ +S NT+I GY +NG +EA
Sbjct: 444 MRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEA 503
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
E++ ME I P T+ S+L
Sbjct: 504 IEVYKMMEEC-----------------------------------KEIIPNQGTWVSILP 528
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
A A + +L++G +IH I L D FV L+++Y + LV A F ++
Sbjct: 529 AYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVP------ 582
Query: 300 GKMKEDGFEPNVYTWNA--------------MQLFSEMLSLDLTPDIYTVGIILSACSSL 345
+ + TWNA ++LF EML + PD T +LSACS
Sbjct: 583 --------QESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHS 634
Query: 346 ATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNAM 404
+E GK G + +VD+ + G L+ A K + PD A+
Sbjct: 635 GFVEEGKWCFRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGAL 694
Query: 405 LTAYAMHGHGKEG 417
L A +HG+ + G
Sbjct: 695 LGACRIHGNIELG 707
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 122/279 (43%), Gaps = 41/279 (14%)
Query: 250 GKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEP 309
K +HAL + G F+ LV +Y D+ ++ FD+I +
Sbjct: 135 AKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIP--------------QK 180
Query: 310 NVYTWNAMQ---------------LFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV 354
+VY WN+M + +L ++ PD YT +L AC +L G+++
Sbjct: 181 DVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRKI 237
Query: 355 HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHG 414
H +A + G+ +V + +L+ MY++ G AR + + D+ S NAM++ +G+
Sbjct: 238 HCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNA 297
Query: 415 KEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKH---- 470
+ + + G + + ++ +S L C G I T L+ Y +K L+
Sbjct: 298 AQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAM----LIHLYVIKHGLEFDLFV 353
Query: 471 YTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
++++ ++ G L +A + +++ D V W +++
Sbjct: 354 SNALINMYAKFGNLEDARKAFQQM-FITDVVSWNSIIAA 391
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 79/174 (45%), Gaps = 21/174 (12%)
Query: 351 GKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAM 410
K +HA + G + I T LV++YA G + +R + +I D+ + N+M++AY
Sbjct: 135 AKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVH 194
Query: 411 HGHGKEGIAHFRR-ILASGFRPDHISFLSALSAC--------VHAGSIKTGSEFFDLMAY 461
+GH E I F + +L S RPD +F L AC +H + K G ++ +A
Sbjct: 195 NGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVDGRKIHCWAFKLGFQWNVFVA- 253
Query: 462 YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
++ + SR G G A +P D W A++ G + +GN
Sbjct: 254 ----------ASLIHMYSRFGFTGIARSLFDDMPFR-DMGSWNAMISGLIQNGN 296
>gi|356506811|ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 751
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 181/605 (29%), Positives = 300/605 (49%), Gaps = 78/605 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KCG LD K+F M +R N+V
Sbjct: 119 LYSKCGELDYTIKLFDKMSQR------------------------------------NMV 142
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+++I GF N +EA+ +M+ EG LSSVL AC L + G + H +
Sbjct: 143 SWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAIQFGTQVHCLV 202
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ GF FV + L D+Y +CG++ A K F + K+ V ++I G+ +NG+ +A
Sbjct: 203 VKCGFGCELFVGSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMIDGFVKNGDFKKAL 262
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+ +M D+ D+ S L A
Sbjct: 263 TAYMKM------------------VTDDVFIDQH------------------VLCSTLSA 286
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFD---EIENIEN 297
C+ + + GK +HA + LG + +TF+G AL +MY + D+V+A F + +I +
Sbjct: 287 CSALKASSFGKSLHATILKLGFEYETFIGNALTDMYSKSGDMVSASNVFQIHSDCISIVS 346
Query: 298 LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAY 357
L + DG+ A+ F ++ + P+ +T ++ AC++ A +E G Q+H
Sbjct: 347 LTAII--DGYVEMDQIEKALSTFVDLRRRGIEPNEFTFTSLIKACANQAKLEHGSQLHGQ 404
Query: 358 AIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEG 417
++ + D + + LVDMY KCG H+ + I PD ++ N ++ ++ HG G+
Sbjct: 405 VVKFNFKRDPFVSSTLVDMYGKCGLFDHSIQLFDEIENPDEIAWNTLVGVFSQHGLGRNA 464
Query: 418 IAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMVD 476
I F ++ G +P+ ++F++ L C HAG ++ G +F M Y V P +HY+C++D
Sbjct: 465 IETFNGMIHRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFSSMEKIYGVVPKEEHYSCVID 524
Query: 477 LLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGN 536
LL RAG+L EA +FI +P P+ W + LG C HG++E + AAD+L++LEP N+G
Sbjct: 525 LLGRAGKLKEAEDFINNMPFEPNVFGWCSFLGACKIHGDMERAKFAADKLMKLEPENSGA 584
Query: 537 YVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEI 596
+V+L+N++A +W D+ R+ +KD M+K PG SW++ R++ H F D SH + +EI
Sbjct: 585 HVLLSNIYAKEKQWEDVQSLRKMIKDGNMNKLPGYSWVDIRNKTHVFGVEDWSHPQKKEI 644
Query: 597 YTIID 601
Y +D
Sbjct: 645 YEKLD 649
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 111/423 (26%), Positives = 201/423 (47%), Gaps = 38/423 (8%)
Query: 93 NARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIF 152
+ +T++ ++ AR ++L+ GK+ H + R G + N F+ N +++Y +CG++ +K+F
Sbjct: 74 DTKTVAHLIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIKLF 133
Query: 153 SKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYD 212
K S QR ++SW S+I+G+ NS +
Sbjct: 134 DKMS-----------------------------------QRNMVSWTSIITGFAHNSRFQ 158
Query: 213 EAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGAL 272
EA S F + + I T F SVL AC + +++ G ++H L + G + FVG L
Sbjct: 159 EALSSFCQMRIEGEI-ATQFALSSVLQACTSLGAIQFGTQVHCLVVKCGFGCELFVGSNL 217
Query: 273 VEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDI 332
+MY + +L A AF+E+ + +L DGF N A+ + +M++ D+ D
Sbjct: 218 TDMYSKCGELSDACKAFEEMPCKDAVLWTSMIDGFVKNGDFKKALTAYMKMVTDDVFIDQ 277
Query: 333 YTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKR 392
+ + LSACS+L GK +HA ++ G++ + IG AL DMY+K G + A ++
Sbjct: 278 HVLCSTLSACSALKASSFGKSLHATILKLGFEYETFIGNALTDMYSKSGDMVSASNVFQI 337
Query: 393 IS-TPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKT 451
S +VS A++ Y ++ ++ F + G P+ +F S + AC + ++
Sbjct: 338 HSDCISIVSLTAIIDGYVEMDQIEKALSTFVDLRRRGIEPNEFTFTSLIKACANQAKLEH 397
Query: 452 GSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCV 511
GS+ + ++ K + +VD+ + G + + +I PD + W L+G
Sbjct: 398 GSQLHGQVVKFNFKRDPFVSSTLVDMYGKCGLFDHSIQLFDEIE-NPDEIAWNTLVGVFS 456
Query: 512 SHG 514
HG
Sbjct: 457 QHG 459
>gi|357136755|ref|XP_003569969.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20770-like [Brachypodium distachyon]
Length = 805
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 185/629 (29%), Positives = 326/629 (51%), Gaps = 50/629 (7%)
Query: 3 GKCGSLDDAKK----VFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPN 58
G +LDD ++ K+ + + N+++ G V +A+ + M+S PN
Sbjct: 151 GAVAALDDGRRCHGLAVKVGLDENLFVENALLGMYTKCGGVEDAVRLFDGMAS-----PN 205
Query: 59 LVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACAR--------LQKL 110
VS++A++GG Q G ++A+ + RM G+ + +SSVL +CA+ ++
Sbjct: 206 EVSFTAMMGGLVQAGSVDDALRLFARMCRSGVRVDPVAVSSVLGSCAQACASEFDVVRAF 265
Query: 111 SLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGY 170
LG+ H I R GF S+ V N L+D+Y +C M A+K+F + VS N +I G+
Sbjct: 266 RLGQCIHALIVRKGFGSDQHVGNSLIDMYTKCMQMDEAVKVFDSLPNISTVSWNILITGF 325
Query: 171 CENGNVAEARELFDQMEHLGVQ----------------RGIIS---------------WN 199
+ G+ A+A E+ + ME G + R ++S WN
Sbjct: 326 GQAGSYAKALEVLNLMEESGSEPNEVTYSNMLASCIKARDVLSARAMFDKISRPSVTTWN 385
Query: 200 SMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIA 259
+++SGY L+ + +FR + ++ ++P T +L +C+ + L G ++H+ ++
Sbjct: 386 TLLSGYCQEELHQDTVELFRRMQHQN-VQPDRTTLAVILSSCSRLGILDLGTQVHSASVR 444
Query: 260 LGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQL 319
L +D FV LV+MY + + A++ F+ + + + G + A
Sbjct: 445 FLLHNDMFVASGLVDMYSKCGQIGIARIIFNRMTERDVVCWNSMISGLAIHSLNEEAFDF 504
Query: 320 FSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAK 379
F +M + P + ++++C+ L+++ +G+Q+HA ++ GYD +V++G+AL+DMYAK
Sbjct: 505 FKQMRGNGMMPTESSYASMINSCARLSSVPQGRQIHAQIVKDGYDQNVYVGSALIDMYAK 564
Query: 380 CGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSA 439
CG++ AR+ + + T ++V+ N M+ YA +G G++ + F +L + RPD ++F++
Sbjct: 565 CGNMDDARVFFDCMVTKNIVAWNEMIHGYAQNGFGEKAVDLFEYMLTTEQRPDGVTFIAV 624
Query: 440 LSACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAP 498
L+ C H+G + FF+ M + Y + P +HYTC++D L RAG L E I +P
Sbjct: 625 LTGCSHSGLVDEAIAFFNSMESTYGITPLAEHYTCLIDGLGRAGRLVEVEALIDNMPCKD 684
Query: 499 DSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQ 558
D ++W LL C H N E G+ AA L L+P N YV+L+N++A GR D + R
Sbjct: 685 DPIVWEVLLAACAVHHNAELGECAAKHLFRLDPKNPSPYVLLSNIYASLGRHGDASGVRA 744
Query: 559 KMKDRRMHKSPGCSWIEDRDEIHKFRASD 587
M R + K G SWI+ +D +H F +D
Sbjct: 745 LMSSRGVVKGRGYSWIDHKDGVHAFMVAD 773
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 153/594 (25%), Positives = 262/594 (44%), Gaps = 111/594 (18%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y G DA + F+ +P + S+N+ ++A G + A L+ M N+V
Sbjct: 52 LYSVSGLPCDALRAFRSLPRPNAYSYNAALSAARRAGDLDAARALLDEMPD-----RNVV 106
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ VI ++ EA+ + M EGL P TL+SVL AC + L G+ HG
Sbjct: 107 SWNTVIAALARSERAGEALELYEGMLREGLVPTHFTLASVLSACGAVAALDDGRRCHGLA 166
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G N FV N L+ +Y +CG + A+++F + NEVS ++ G + G+V +A
Sbjct: 167 VKVGLDENLFVENALLGMYTKCGGVEDAVRLFDGMASPNEVSFTAMMGGLVQAGSVDDAL 226
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LF +M GV+ ++ +S++ GS A
Sbjct: 227 RLFARMCRSGVRVDPVAVSSVL--------------------------------GSCAQA 254
Query: 241 CAD----MNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
CA + + R G+ IHAL + G SD VG +L++MY + + A FD + NI
Sbjct: 255 CASEFDVVRAFRLGQCIHALIVRKGFGSDQHVGNSLIDMYTKCMQMDEAVKVFDSLPNIS 314
Query: 297 N---------------------LLGKMKEDGFEPN------------------------- 310
+L M+E G EPN
Sbjct: 315 TVSWNILITGFGQAGSYAKALEVLNLMEESGSEPNEVTYSNMLASCIKARDVLSARAMFD 374
Query: 311 ------VYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSSLATMER 350
V TWN + +LF M ++ PD T+ +ILS+CS L ++
Sbjct: 375 KISRPSVTTWNTLLSGYCQEELHQDTVELFRRMQHQNVQPDRTTLAVILSSCSRLGILDL 434
Query: 351 GKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAM 410
G QVH+ ++R +D+ + + LVDMY+KCG + AR+ + R++ D+V N+M++ A+
Sbjct: 435 GTQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARIIFNRMTERDVVCWNSMISGLAI 494
Query: 411 HGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKH 470
H +E F+++ +G P S+ S +++C S+ G + + ++
Sbjct: 495 HSLNEEAFDFFKQMRGNGMMPTESSYASMINSCARLSSVPQGRQIHAQIVKDGYDQNVYV 554
Query: 471 YTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAAD 524
+ ++D+ ++ G + +A F + + + V W ++ G +G FG+ A D
Sbjct: 555 GSALIDMYAKCGNMDDARVFFDCM-VTKNIVAWNEMIHGYAQNG---FGEKAVD 604
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 103/407 (25%), Positives = 186/407 (45%), Gaps = 20/407 (4%)
Query: 124 GFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELF 183
G ++ F++N LV++Y G AL+ F N S N + G++ AR L
Sbjct: 38 GLGADTFLINRLVELYSVSGLPCDALRAFRSLPRPNAYSYNAALSAARRAGDLDAARALL 97
Query: 184 DQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACAD 243
D+M R ++SWN++I+ + EA ++ +L R+G+ PT FT SVL AC
Sbjct: 98 DEMP----DRNVVSWNTVIAALARSERAGEALELYEGML-REGLVPTHFTLASVLSACGA 152
Query: 244 MNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMK 303
+ +L G+ H LA+ +GL + FV AL+ MY + + A FD + + +
Sbjct: 153 VAALDDGRRCHGLAVKVGLDENLFVENALLGMYTKCGGVEDAVRLFDGMASPNEVSFTAM 212
Query: 304 EDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATME--------RGKQVH 355
G +A++LF+ M + D V +L +C+ E G+ +H
Sbjct: 213 MGGLVQAGSVDDALRLFARMCRSGVRVDPVAVSSVLGSCAQACASEFDVVRAFRLGQCIH 272
Query: 356 AYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGK 415
A +R G+ SD H+G +L+DMY KC + A + + VS N ++T + G
Sbjct: 273 ALIVRKGFGSDQHVGNSLIDMYTKCMQMDEAVKVFDSLPNISTVSWNILITGFGQAGSYA 332
Query: 416 EGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMV 475
+ + + SG P+ +++ + L++C+ A + + FD ++ +PS+ + ++
Sbjct: 333 KALEVLNLMEESGSEPNEVTYSNMLASCIKARDVLSARAMFDKIS----RPSVTTWNTLL 388
Query: 476 DLLSRAGELGEAYEFIKKIP---MAPDSVMWGALLGGCVSHGNLEFG 519
+ + E +++ + PD +L C G L+ G
Sbjct: 389 SGYCQEELHQDTVELFRRMQHQNVQPDRTTLAVILSSCSRLGILDLG 435
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 148/349 (42%), Gaps = 62/349 (17%)
Query: 258 IALGLQSDTFVGGALVEMYC---------------------RYQDLVAAQMAFDEIENIE 296
+A GL +DTF+ LVE+Y Y ++A +++
Sbjct: 35 LAAGLGADTFLINRLVELYSVSGLPCDALRAFRSLPRPNAYSYNAALSAARRAGDLDAAR 94
Query: 297 NLLGKMKEDGFEPNVYTWN--------------AMQLFSEMLSLDLTPDIYTVGIILSAC 342
LL +M + NV +WN A++L+ ML L P +T+ +LSAC
Sbjct: 95 ALLDEMPDR----NVVSWNTVIAALARSERAGEALELYEGMLREGLVPTHFTLASVLSAC 150
Query: 343 SSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQN 402
++A ++ G++ H A++ G D ++ + AL+ MY KCG ++ A + +++P+ VS
Sbjct: 151 GAVAALDDGRRCHGLAVKVGLDENLFVENALLGMYTKCGGVEDAVRLFDGMASPNEVSFT 210
Query: 403 AMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHA--------GSIKTGSE 454
AM+ G + + F R+ SG R D ++ S L +C A + + G
Sbjct: 211 AMMGGLVQAGSVDDALRLFARMCRSGVRVDPVAVSSVLGSCAQACASEFDVVRAFRLGQC 270
Query: 455 FFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
L+ ++D+ ++ ++ EA + +P +V W L+ G
Sbjct: 271 IHALIVRKGFGSDQHVGNSLIDMYTKCMQMDEAVKVFDSLPNI-STVSWNILITG----- 324
Query: 515 NLEFGQIAA-DRLIEL-----EPNNTGNYVMLANLFAYAGRWSDLARTR 557
FGQ + + +E+ E + N V +N+ A + D+ R
Sbjct: 325 ---FGQAGSYAKALEVLNLMEESGSEPNEVTYSNMLASCIKARDVLSAR 370
>gi|225463424|ref|XP_002272240.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Vitis vinifera]
Length = 629
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 174/561 (31%), Positives = 288/561 (51%), Gaps = 74/561 (13%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
N+ +++A+I GF NG+ EE +M+ EG+ P+ T + AC + ++ K+ H
Sbjct: 103 NVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKACLDVLEI---KKIH 159
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
G + + G + F+ + LV+ Y + G M A F + I
Sbjct: 160 GLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPI-------------------- 199
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
R ++ WN+M++GY ++ FR + + + P+ FT V
Sbjct: 200 ---------------RDVVLWNAMVNGYAQIGQFEMVLETFRRM-NDESVVPSRFTVTGV 243
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
L A M L G+ IH A+ +G S V +L++MY + + + A F+ +
Sbjct: 244 LSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMR---- 299
Query: 298 LLGKMKEDGFEPNVYTWNA--------------MQLFSEMLSLDLTPDIYTVGIILSACS 343
E ++++WN+ ++L ML + PD+ TV +L ACS
Sbjct: 300 ----------EKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACS 349
Query: 344 SLATMERGKQVHAYAIRCGYDSD------VHIGTALVDMYAKCGSLKHARLAYKRISTPD 397
LA + G+++H Y I G D V + A++DMYAKCGS++ A L ++R+S D
Sbjct: 350 HLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKD 409
Query: 398 LVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFD 457
+ S N M+ Y MHG+G E + F R+ +PD ++F+ LSAC HAG + G F
Sbjct: 410 VASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLV 469
Query: 458 LM-AYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNL 516
M + YDV P+++HYTC++D+L RAG+L EAYE +P+ + V+W ALL C H +
Sbjct: 470 QMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALLAACRLHKHA 529
Query: 517 EFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIED 576
++AA R+ ELEP + G+YV+++N++ GR+ ++ R M+ + + K+PGCSWIE
Sbjct: 530 VLAEVAAQRVFELEPEHCGSYVLMSNVYGAVGRYEEVLEVRHTMRQQNVRKTPGCSWIEL 589
Query: 577 RDEIHKFRASDRSHDRSEEIY 597
++ +H F ++DR+H + IY
Sbjct: 590 KNGVHVFVSADRAHPEAHSIY 610
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 120/483 (24%), Positives = 219/483 (45%), Gaps = 56/483 (11%)
Query: 93 NARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIF 152
N T + L A A + LS GKE H Y+ NGF+++P + L+++Y +C M AL IF
Sbjct: 36 NLTTCIASLQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSLINMYSKCNQMNFALSIF 95
Query: 153 SKFSIK-NEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLY 211
S + + N + N II G+ NG E E + +M +
Sbjct: 96 SDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRN----------------------- 132
Query: 212 DEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGA 271
+G+ P FTF + AC D+ ++K IH L GL+ D F+G A
Sbjct: 133 -------------EGVIPDKFTFPCAIKACLDVLEIKK---IHGLLFKFGLELDVFIGSA 176
Query: 272 LVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPD 331
LV Y ++ + AQ+AF+E+ + +L +G+ ++ F M + P
Sbjct: 177 LVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPS 236
Query: 332 IYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYK 391
+TV +LS + + + G+ +H +A++ GYDS V + +L+DMY KC ++ A ++
Sbjct: 237 RFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFE 296
Query: 392 RISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKT 451
+ D+ S N++++ + G + R+L +G +PD ++ + L AC H ++
Sbjct: 297 MMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMH 356
Query: 452 GSEFFDLMAYYDVKPSLKHY------TCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGA 505
G E M + K ++D+ ++ G + +A+ +++ D W
Sbjct: 357 GREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMS-NKDVASWNI 415
Query: 506 LLGGCVSHGNLEFGQIAADRL-----IELEPNNTGNYVMLANLFAYAGRWSDLARTRQKM 560
++ G HG +G A + ++L+P+ +V + + ++AG S +M
Sbjct: 416 MIMGYGMHG---YGNEALEMFSRMCEVQLKPDEV-TFVGVLSACSHAGFVSQGRNFLVQM 471
Query: 561 KDR 563
K +
Sbjct: 472 KSK 474
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 113/442 (25%), Positives = 187/442 (42%), Gaps = 57/442 (12%)
Query: 5 CGSLDDAKKV----FKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
C + + KK+ FK E D +++V GL+ A E + D +V
Sbjct: 149 CLDVLEIKKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRD-----VV 203
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
W+A++ G+ Q G E + RM E + P+ T++ VL A + L+ G+ HG+
Sbjct: 204 LWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFA 263
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G+ S V N L+D+Y +C + AL+IF K+ S N+I+ + + G+
Sbjct: 264 MKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTL 323
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
L D+M LG GI+P T +VL A
Sbjct: 324 RLLDRM--LGA----------------------------------GIQPDLVTVTTVLPA 347
Query: 241 CADMNSLRKGKEIHALAIALGLQS------DTFVGGALVEMYCRYQDLVAAQMAFDEIEN 294
C+ + +L G+EIH I GL D + A+++MY + + A + F+ + N
Sbjct: 348 CSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSN 407
Query: 295 IENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV 354
+ + G+ + Y A+++FS M + L PD T +LSACS + +G+
Sbjct: 408 KDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNF 467
Query: 355 HAYAIRCGYDSDVHIG--TALVDMYAKCGSLKHA-RLAYKRISTPDLVSQNAMLTAYAMH 411
++ YD I T ++DM + G L A LA + V A+L A +H
Sbjct: 468 -LVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALLAACRLH 526
Query: 412 GHGKEGIAHFRRILASGFRPDH 433
H +R+ P+H
Sbjct: 527 KHAVLAEVAAQRVFE--LEPEH 546
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 143/304 (47%), Gaps = 49/304 (16%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKC ++DA ++F+MM E+D +
Sbjct: 281 MYGKCKCIEDALEIFEMMREKD------------------------------------IF 304
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW++++ Q G + + +L RM G++P+ T+++VLPAC+ L L G+E HGY+
Sbjct: 305 SWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYM 364
Query: 121 TRNGF------MSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
+G + + + N ++D+Y +CG M A +F + S K+ S N +I+GY +G
Sbjct: 365 IVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMGYGMHG 424
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTF 234
EA E+F +M + ++ +++ ++S + + + + + PT +
Sbjct: 425 YGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQMKSKYDVAPTIEHY 484
Query: 235 GSVLIACADMNSLRKGK--EIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI 292
V+ DM R G+ E + LA+ + ++++ V AL+ ++ V A++A +
Sbjct: 485 TCVI----DMLG-RAGQLDEAYELALTMPIEANPVVWRALLAACRLHKHAVLAEVAAQRV 539
Query: 293 ENIE 296
+E
Sbjct: 540 FELE 543
>gi|225432688|ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Vitis vinifera]
Length = 684
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 182/550 (33%), Positives = 287/550 (52%), Gaps = 41/550 (7%)
Query: 56 TPN--LVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLG 113
TPN +V+W+A+I G QNG A+ M+ + ++PN T A L+ +G
Sbjct: 68 TPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVG 127
Query: 114 KEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCEN 173
K+ H + G +S+ FV D+Y + G
Sbjct: 128 KQVHALAVKAGQISDVFVGCSAFDMYSKAG------------------------------ 157
Query: 174 GNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFT 233
EAR++FD+M +R I +WN+ +S V YD+A + F + +G EP T
Sbjct: 158 -LTEEARKMFDEMP----ERNIATWNAYLSNSVLEGRYDDALTAFIEF-RHEGWEPNLIT 211
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
F + L ACA + LR G+++H + G ++D V L++ Y + + +++ F I
Sbjct: 212 FCAFLNACAGASYLRLGRQLHGFVLQSGFEADVSVANGLIDFYGKCHQVGCSEIIFSGIS 271
Query: 294 NIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ 353
++ + N A +F + P + V +LSAC+ L+ +E GK
Sbjct: 272 KPNDVSWCSMIVSYVQNDEEEKACLVFLRARKEGIEPTDFMVSSVLSACAGLSVLEVGKS 331
Query: 354 VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGH 413
VH A++ ++ +G+ALVDMY KCGS++ A A+ + +LV+ NAM+ YA G
Sbjct: 332 VHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQ 391
Query: 414 GKEGIAHFRRILASGFR--PDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKH 470
+ F + R P++++F+ LSAC AGS+ G E F+ M Y ++P +H
Sbjct: 392 ADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEH 451
Query: 471 YTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELE 530
Y C+VDLL RAG + +AY+FIKK+P+ P +WGALLG G E G++AAD L EL+
Sbjct: 452 YACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGALLGASKMFGKSELGKVAADNLFELD 511
Query: 531 PNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSH 590
P ++GN+V+L+N+FA AGRW + R++MKD + K GCSWI + +H F+A D SH
Sbjct: 512 PLDSGNHVLLSNMFAAAGRWEEATLVRKEMKDVGIKKGAGCSWITAGNAVHVFQAKDTSH 571
Query: 591 DRSEEIYTII 600
+R+ EI ++
Sbjct: 572 ERNSEIQAML 581
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 120/435 (27%), Positives = 186/435 (42%), Gaps = 104/435 (23%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G ++A+K+F MPER+ +WN+ ++ VLE
Sbjct: 152 MYSKAGLTEEARKMFDEMPERNIATWNAYLS-----NSVLE------------------- 187
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
G ++A+ + EG EPN T + L ACA L LG++ HG++
Sbjct: 188 ------------GRYDDALTAFIEFRHEGWEPNLITFCAFLNACAGASYLRLGRQLHGFV 235
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
++GF ++ V NGL+D Y +C + + IFS S N+VS ++IV Y +N +A
Sbjct: 236 LQSGFEADVSVANGLIDFYGKCHQVGCSEIIFSGISKPNDVSWCSMIVSYVQNDEEEKAC 295
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+F + ++GIEPT F SVL A
Sbjct: 296 LVFLRAR------------------------------------KEGIEPTDFMVSSVLSA 319
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA ++ L GK +H LA+ + + FVG ALV+MY + + A+ AFDE+
Sbjct: 320 CAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMP------- 372
Query: 301 KMKEDGFEPNVYTWNAM--------------QLFSEML--SLDLTPDIYTVGIILSACSS 344
E N+ TWNAM LF EM S + P+ T +LSACS
Sbjct: 373 -------ERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSR 425
Query: 345 LATMERGKQV-HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST-PDLVSQN 402
++ G ++ + R G + +VD+ + G ++ A K++ P +
Sbjct: 426 AGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWG 485
Query: 403 AMLTAYAMHGHGKEG 417
A+L A M G + G
Sbjct: 486 ALLGASKMFGKSELG 500
>gi|449438472|ref|XP_004137012.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Cucumis sativus]
gi|449493172|ref|XP_004159212.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Cucumis sativus]
Length = 605
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 186/519 (35%), Positives = 281/519 (54%), Gaps = 41/519 (7%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
++VSW+++I G+ + G AI + + M G+EPN TLS+V+ AC+ + L LGK FH
Sbjct: 126 DVVSWASMITGYVREGKSGIAIELFWDMLDSGIEPNGFTLSAVIKACSEIGNLVLGKCFH 185
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
G + R GF SNP +++ L+D+Y R N VS +
Sbjct: 186 GVVVRRGFDSNPVILSSLIDMYGR-----------------NSVS--------------S 214
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
+AR+LFD++ ++ + W ++IS + N LY+EA F + P ++TFGSV
Sbjct: 215 DARQLFDEL----LEPDPVCWTTVISAFTRNDLYEEALGFFYLKHRAHRLCPDNYTFGSV 270
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
L AC ++ LR+G+EIHA IA G + +LV+MY + + +Q FD + N +
Sbjct: 271 LTACGNLGRLRQGEEIHAKVIAYGFSGNVVTESSLVDMYGKCGAVEKSQRLFDRMSNRNS 330
Query: 298 LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAY 357
+ + N A+ LF EM +DL Y+ G ++ AC+ LA + GK++H
Sbjct: 331 VSWSALLAVYCHNGDYEKAVNLFREMKEVDL----YSFGTVIRACAGLAAVTPGKEIHCQ 386
Query: 358 AIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEG 417
IR G DV + +ALVD+YAKCG + A + R+ T +L++ N+M+ +A +G
Sbjct: 387 YIRKGGWRDVIVESALVDLYAKCGCINFAYRVFDRMPTRNLITWNSMIHGFAQNGSSGIA 446
Query: 418 IAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVD 476
I F ++ G +PD ISF+ L AC H G + +FDLM Y +KP ++HY CMVD
Sbjct: 447 IQIFEAMIKEGIKPDCISFIGLLFACSHTGLVDQARHYFDLMTGKYGIKPGVEHYNCMVD 506
Query: 477 LLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSH-GNLEFGQIAADRLIELEPNNTG 535
LL RAG L EA I+ DS +W LLG C + N + A +L+ELEP
Sbjct: 507 LLGRAGLLEEAENLIENAECRNDSSLWLVLLGACTTTCTNSATAERIAKKLMELEPQCYL 566
Query: 536 NYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWI 574
+YV LAN++ GRW D + R+ MK+R++ K PG SW+
Sbjct: 567 SYVHLANVYRAVGRWDDAVKVRELMKNRQLKKMPGQSWM 605
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 115/453 (25%), Positives = 213/453 (47%), Gaps = 50/453 (11%)
Query: 69 FTQNGYDEEAIGMLFRMQAEGLEPNARTL-SSVLPACARLQKLSLGKEFHGYITRNGFMS 127
F ++G +A+ +L + N L +S+L C ++ + G++FH ++ ++G +
Sbjct: 34 FCKSGLLNDALHLLNSIDLYDSRINKPLLYASLLQTCIKVDSFTRGRQFHAHVVKSGLET 93
Query: 128 NPFVVNGLVDVYRRCG-DMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQM 186
+ FV N L+ +Y + G D L ++F +K+
Sbjct: 94 DRFVGNSLLSLYFKLGSDSLLTRRVFDGLFVKD--------------------------- 126
Query: 187 EHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNS 246
++SW SMI+GYV A +F D+L GIEP FT +V+ AC+++ +
Sbjct: 127 --------VVSWASMITGYVREGKSGIAIELFWDML-DSGIEPNGFTLSAVIKACSEIGN 177
Query: 247 LRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDG 306
L GK H + + G S+ + +L++MY R A+ FDE+ + +
Sbjct: 178 LVLGKCFHGVVVRRGFDSNPVILSSLIDMYGRNSVSSDARQLFDELLEPDPVCWTTVISA 237
Query: 307 FEPNVYTWNAMQLFS-EMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDS 365
F N A+ F + + L PD YT G +L+AC +L + +G+++HA I G+
Sbjct: 238 FTRNDLYEEALGFFYLKHRAHRLCPDNYTFGSVLTACGNLGRLRQGEEIHAKVIAYGFSG 297
Query: 366 DVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRIL 425
+V ++LVDMY KCG+++ ++ + R+S + VS +A+L Y +G ++ + FR +
Sbjct: 298 NVVTESSLVDMYGKCGAVEKSQRLFDRMSNRNSVSWSALLAVYCHNGDYEKAVNLFREMK 357
Query: 426 ASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHY---TCMVDLLSRAG 482
D SF + + AC ++ G E + Y K + + +VDL ++ G
Sbjct: 358 ----EVDLYSFGTVIRACAGLAAVTPGKE---IHCQYIRKGGWRDVIVESALVDLYAKCG 410
Query: 483 ELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
+ AY ++P + + W +++ G +G+
Sbjct: 411 CINFAYRVFDRMP-TRNLITWNSMIHGFAQNGS 442
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 151/334 (45%), Gaps = 46/334 (13%)
Query: 57 PNLVSWSAVIGGFTQNGYDEEAIGMLF-RMQAEGLEPNARTLSSVLPACARLQKLSLGKE 115
P+ V W+ VI FT+N EEA+G + + +A L P+ T SVL AC L +L G+E
Sbjct: 226 PDPVCWTTVISAFTRNDLYEEALGFFYLKHRAHRLCPDNYTFGSVLTACGNLGRLRQGEE 285
Query: 116 FHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGN 175
H + GF N + LVD+Y +CG + + ++F + S +N VS + ++ YC NG+
Sbjct: 286 IHAKVIAYGFSGNVVTESSLVDMYGKCGAVEKSQRLFDRMSNRNSVSWSALLAVYCHNGD 345
Query: 176 VAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFG 235
+A LF +M+ + + ++FG
Sbjct: 346 YEKAVNLFREMKEVDL----------------------------------------YSFG 365
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
+V+ ACA + ++ GKEIH I G D V ALV++Y + + A FD +
Sbjct: 366 TVIRACAGLAAVTPGKEIHCQYIRKGGWRDVIVESALVDLYAKCGCINFAYRVFDRMPTR 425
Query: 296 ENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVH 355
+ GF N + A+Q+F M+ + PD + +L ACS +++ + H
Sbjct: 426 NLITWNSMIHGFAQNGSSGIAIQIFEAMIKEGIKPDCISFIGLLFACSHTGLVDQAR--H 483
Query: 356 AYAI---RCGYDSDVHIGTALVDMYAKCGSLKHA 386
+ + + G V +VD+ + G L+ A
Sbjct: 484 YFDLMTGKYGIKPGVEHYNCMVDLLGRAGLLEEA 517
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 154/320 (48%), Gaps = 3/320 (0%)
Query: 200 SMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIA 259
S I + + L ++A + + + D + S+L C ++S +G++ HA +
Sbjct: 29 SQILQFCKSGLLNDALHLLNSIDLYDSRINKPLLYASLLQTCIKVDSFTRGRQFHAHVVK 88
Query: 260 LGLQSDTFVGGALVEMYCRY-QDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQ 318
GL++D FVG +L+ +Y + D + + FD + + + G+ + A++
Sbjct: 89 SGLETDRFVGNSLLSLYFKLGSDSLLTRRVFDGLFVKDVVSWASMITGYVREGKSGIAIE 148
Query: 319 LFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYA 378
LF +ML + P+ +T+ ++ ACS + + GK H +R G+DS+ I ++L+DMY
Sbjct: 149 LFWDMLDSGIEPNGFTLSAVIKACSEIGNLVLGKCFHGVVVRRGFDSNPVILSSLIDMYG 208
Query: 379 KCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFR-RILASGFRPDHISFL 437
+ AR + + PD V +++A+ + +E + F + A PD+ +F
Sbjct: 209 RNSVSSDARQLFDELLEPDPVCWTTVISAFTRNDLYEEALGFFYLKHRAHRLCPDNYTFG 268
Query: 438 SALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMA 497
S L+AC + G ++ G E + Y ++ + +VD+ + G + ++ ++
Sbjct: 269 SVLTACGNLGRLRQGEEIHAKVIAYGFSGNVVTESSLVDMYGKCGAVEKSQRLFDRMS-N 327
Query: 498 PDSVMWGALLGGCVSHGNLE 517
+SV W ALL +G+ E
Sbjct: 328 RNSVSWSALLAVYCHNGDYE 347
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 108/229 (47%), Gaps = 40/229 (17%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKCG+++ ++++F M R N V
Sbjct: 308 MYGKCGAVEKSQRLFDRMSNR------------------------------------NSV 331
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SWSA++ + NG E+A+ + M+ E + + +V+ ACA L ++ GKE H
Sbjct: 332 SWSALLAVYCHNGDYEKAVNLFREMK----EVDLYSFGTVIRACAGLAAVTPGKEIHCQY 387
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R G + V + LVD+Y +CG + A ++F + +N ++ N++I G+ +NG+ A
Sbjct: 388 IRKGGWRDVIVESALVDLYAKCGCINFAYRVFDRMPTRNLITWNSMIHGFAQNGSSGIAI 447
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEP 229
++F+ M G++ IS+ ++ L D+A F + + GI+P
Sbjct: 448 QIFEAMIKEGIKPDCISFIGLLFACSHTGLVDQARHYFDLMTGKYGIKP 496
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 77/195 (39%), Gaps = 39/195 (20%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KCG ++ A +VF MP R+ ++WNS+
Sbjct: 405 LYAKCGCINFAYRVFDRMPTRNLITWNSM------------------------------- 433
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
I GF QNG AI + M EG++P+ + +L AC+ + + + +
Sbjct: 434 -----IHGFAQNGSSGIAIQIFEAMIKEGIKPDCISFIGLLFACSHTGLVDQARHYFDLM 488
Query: 121 T-RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCEN--GNVA 177
T + G N +VD+ R G + A + +N+ S +++G C N A
Sbjct: 489 TGKYGIKPGVEHYNCMVDLLGRAGLLEEAENLIENAECRNDSSLWLVLLGACTTTCTNSA 548
Query: 178 EARELFDQMEHLGVQ 192
A + ++ L Q
Sbjct: 549 TAERIAKKLMELEPQ 563
>gi|147860004|emb|CAN81045.1| hypothetical protein VITISV_006763 [Vitis vinifera]
Length = 1321
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 178/599 (29%), Positives = 304/599 (50%), Gaps = 74/599 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG +D A +V+ ++M+SLD T N
Sbjct: 157 MYAKCGEVDSAVRVY-------------------------------DKMTSLDAATCN-- 183
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+I + +NG+ +A + ++ G PN T S++L C + + GK+ H ++
Sbjct: 184 ---CLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQEGKQLHAHV 240
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ ++S V N L+ +Y +CG M EA
Sbjct: 241 VKMQYLSETAVGNALLTLYSKCGMM-------------------------------EEAE 269
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+F+ + QR IISW + I+G+ + + +A F ++ GIEP FTF VL +
Sbjct: 270 IVFESLR----QRNIISWTASINGFYQHGDFKKALKQF-SMMRESGIEPNEFTFSIVLAS 324
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI-ENIENLL 299
C + G+ H I G+ S FVG A+++MY ++ A+ F ++ N+
Sbjct: 325 CGCVKDFIDGRMFHTQVIKKGMASGVFVGTAIIDMYSGLGEMDEAEKQFKQMGRAASNVS 384
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
G+ N AM+ F M+ D+ + +T I ACSS ++ Q+H+ I
Sbjct: 385 WNALIAGYVLNEKIEKAMEAFCRMVKEDVACNEFTYSNIFKACSSFPSLATTVQIHSRLI 444
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
+ +S++H+ ++L++ Y +CGSL++A + +IS D+VS N+++ AY+ +G + I
Sbjct: 445 KSNVESNLHVASSLIEAYTQCGSLENAVQVFTQISDADVVSWNSIIKAYSQNGDPWKAIF 504
Query: 420 HFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLL 478
R+++ G +P +FL+ LSAC H+G ++ G EFF M Y ++P H +CMVD+L
Sbjct: 505 LLRKMIEEGNKPTSXTFLTVLSACSHSGLVQEGQEFFKSMVQDYSIQPEETHCSCMVDIL 564
Query: 479 SRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYV 538
RAG+L A +FIKK+ M P + +W LL C + NL+ + A+++++LEPN+ YV
Sbjct: 565 GRAGQLENALDFIKKLTMKPTASIWRPLLAACRYNSNLQMAEYVAEKILDLEPNDATVYV 624
Query: 539 MLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
L+N++A GRW+D R+ M+ + + K PGCSWIE ++++KF + D++H ++Y
Sbjct: 625 TLSNMYAEVGRWADAENQRRLMEQKEISKEPGCSWIEVNNKMYKFFSHDKAHPEMPKVY 683
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 161/479 (33%), Positives = 253/479 (52%), Gaps = 80/479 (16%)
Query: 170 YCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEP 229
Y E G ++ AR+LFD++ + ++R W + Y+EA S F ++ ++G+ P
Sbjct: 848 YTECGQLSNARKLFDKIPNTNIRR----WIVLTGACARRGFYEEALSAFSEM-QKEGLRP 902
Query: 230 TSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMY---------CRY- 279
F S+L AC ++ R G+ +H + + +SD ++ AL+ MY CR
Sbjct: 903 NQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVF 962
Query: 280 -----QDLVA--------AQMAFDEIENIENLLGKMKEDGFEPNVYTWNAM--------- 317
+DLV AQ F + BL+ KM++ G +PNV +WN +
Sbjct: 963 DWIVDKDLVVMNAMVSGYAQHGF--VHEALBLVQKMQQAGVKPNVVSWNTLIAGFSQVGD 1020
Query: 318 ----------------------------------------QLFSEMLSLDLTPDIYTVGI 337
F EML P T+
Sbjct: 1021 KSMVSEVFRLMTANGVEPDVVSWTSVISGFVQNFHNHEGFDAFKEMLDQGFCPSSVTISS 1080
Query: 338 ILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPD 397
+L AC+++A + GK++H YA+ G + DV++ +ALVDMYAKCG + A++ + + +
Sbjct: 1081 LLPACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERN 1140
Query: 398 LVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFD 457
V+ N+++ YA HG+ E I F ++ S + DH++F + L+AC HAG ++ G F
Sbjct: 1141 TVTWNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFX 1200
Query: 458 LMA-YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNL 516
M Y ++P L+HY CMVDLL RAG+L EAY+ IK +P+ PD +WGALLG C +HGN+
Sbjct: 1201 KMQEKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRNHGNI 1260
Query: 517 EFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIE 575
E ++AA+ L ELEP + G+ ++L+NL+A AGRW + A+ ++ MK R+ K PGCSWIE
Sbjct: 1261 ELAEVAAEHLFELEPESPGSSLLLSNLYADAGRWGNAAKMKKMMKQRKFGKFPGCSWIE 1319
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 124/454 (27%), Positives = 197/454 (43%), Gaps = 82/454 (18%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
Y +CG L +A+K+F +P + W + ACA G
Sbjct: 847 FYTECGQLSNARKLFDKIPNTNIRRWIVLTGACARRG----------------------- 883
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+ EEA+ MQ EGL PN L S+L AC L G+ H I
Sbjct: 884 -------------FYEEALSAFSEMQKEGLRPNQFVLPSILKACGHLSDRRTGENMHTVI 930
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+N F S+ ++++ L+ +Y +CG + A ++F K+ V N ++ GY ++G V EA
Sbjct: 931 LKNSFESDAYIISALIYMYSKCGHVEKACRVFDWIVDKDLVVMNAMVSGYAQHGFVHEAL 990
Query: 181 ELFDQMEHLGVQRGIISWN-----------------------------------SMISGY 205
+L +M+ GV+ ++SWN S+ISG+
Sbjct: 991 BLVQKMQQAGVKPNVVSWNTLIAGFSQVGDKSMVSEVFRLMTANGVEPDVVSWTSVISGF 1050
Query: 206 VDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSD 265
V N E F F+++L G P+S T S+L AC ++ +LR GKEIH A+ +G++ D
Sbjct: 1051 VQNFHNHEGFDAFKEML-DQGFCPSSVTISSLLPACTNVANLRHGKEIHGYAMVIGVEKD 1109
Query: 266 TFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLS 325
+V ALV+MY + + A++ F + + G+ + Y A++LF++M
Sbjct: 1110 VYVRSALVDMYAKCGYISEAKILFYMMPERNTVTWNSLIFGYANHGYCNEAIELFNQMEE 1169
Query: 326 LDLTPDIYTVGIILSACSSLATMERG-----KQVHAYAIRCGYDSDVHIGTALVDMYAKC 380
D D T +L+ACS +E G K Y I + + +VD+ +
Sbjct: 1170 SDTKLDHLTFTAVLNACSHAGMVELGESLFXKMQEKYRI----EPRLEHYACMVDLLGRA 1225
Query: 381 GSLKHARLAYKRIST-PDLVSQNAMLTAYAMHGH 413
G L A K + PD A+L A HG+
Sbjct: 1226 GKLSEAYDLIKAMPVEPDKFVWGALLGACRNHGN 1259
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/425 (22%), Positives = 195/425 (45%), Gaps = 38/425 (8%)
Query: 92 PNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKI 151
P+ + + S L C R + LG+ +H ++ + G S+ FV L+D+Y +C
Sbjct: 111 PHRQYVFSALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKC--------- 161
Query: 152 FSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLY 211
G V A ++D+M L + N +IS Y N +
Sbjct: 162 ----------------------GEVDSAVRVYDKMTSLDAA----TCNCLISAYARNGFF 195
Query: 212 DEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGA 271
+AF +F + G P +T+ ++L C ++++++GK++HA + + S+T VG A
Sbjct: 196 VQAFQVFMQI-GNMGTRPNHYTYSTMLAVCGTISAIQEGKQLHAHVVKMQYLSETAVGNA 254
Query: 272 LVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPD 331
L+ +Y + + A++ F+ + + +GF + A++ FS M + P+
Sbjct: 255 LLTLYSKCGMMEEAEIVFESLRQRNIISWTASINGFYQHGDFKKALKQFSMMRESGIEPN 314
Query: 332 IYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYK 391
+T I+L++C + G+ H I+ G S V +GTA++DMY+ G + A +K
Sbjct: 315 EFTFSIVLASCGCVKDFIDGRMFHTQVIKKGMASGVFVGTAIIDMYSGLGEMDEAEKQFK 374
Query: 392 RIS-TPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIK 450
++ VS NA++ Y ++ ++ + F R++ + ++ + AC S+
Sbjct: 375 QMGRAASNVSWNALIAGYVLNEKIEKAMEAFCRMVKEDVACNEFTYSNIFKACSSFPSLA 434
Query: 451 TGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGC 510
T + + +V+ +L + +++ ++ G L A + +I A D V W +++
Sbjct: 435 TTVQIHSRLIKSNVESNLHVASSLIEAYTQCGSLENAVQVFTQISDA-DVVSWNSIIKAY 493
Query: 511 VSHGN 515
+G+
Sbjct: 494 SQNGD 498
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/332 (28%), Positives = 164/332 (49%), Gaps = 41/332 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMS---------- 50
MY KCG ++ A +VF + ++D V N++V+ A +G V EAL+ +++M
Sbjct: 948 MYSKCGHVEKACRVFDWIVDKDLVVMNAMVSGYAQHGFVHEALBLVQKMQQAGVKPNVVS 1007
Query: 51 --------------SLDNET----------PNLVSWSAVIGGFTQNGYDEEAIGMLFRMQ 86
S+ +E P++VSW++VI GF QN ++ E M
Sbjct: 1008 WNTLIAGFSQVGDKSMVSEVFRLMTANGVEPDVVSWTSVISGFVQNFHNHEGFDAFKEML 1067
Query: 87 AEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDML 146
+G P++ T+SS+LPAC + L GKE HGY G + +V + LVD+Y +CG +
Sbjct: 1068 DQGFCPSSVTISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYIS 1127
Query: 147 SALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYV 206
A +F +N V+ N++I GY +G EA ELF+QME + +++ ++++
Sbjct: 1128 EAKILFYMMPERNTVTWNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACS 1187
Query: 207 DNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGK--EIHALAIALGLQS 264
+ + S+F + + IEP + AC R GK E + L A+ ++
Sbjct: 1188 HAGMVELGESLFXKMQEKYRIEPRLEHY-----ACMVDLLGRAGKLSEAYDLIKAMPVEP 1242
Query: 265 DTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
D FV GAL+ + ++ A++A + + +E
Sbjct: 1243 DKFVWGALLGACRNHGNIELAEVAAEHLFELE 1274
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 159/323 (49%), Gaps = 2/323 (0%)
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
S L C + G+ H + +GL SD FV +L++MY + ++ +A +D++ ++
Sbjct: 118 SALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRVYDKMTSL 177
Query: 296 ENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVH 355
+ + N + A Q+F ++ ++ P+ YT +L+ C +++ ++ GKQ+H
Sbjct: 178 DAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQEGKQLH 237
Query: 356 AYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGK 415
A+ ++ Y S+ +G AL+ +Y+KCG ++ A + ++ + +++S A + + HG K
Sbjct: 238 AHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFESLRQRNIISWTASINGFYQHGDFK 297
Query: 416 EGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMV 475
+ + F + SG P+ +F L++C G F + + + T ++
Sbjct: 298 KALKQFSMMRESGIEPNEFTFSIVLASCGCVKDFIDGRMFHTQVIKKGMASGVFVGTAII 357
Query: 476 DLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTG 535
D+ S GE+ EA + K++ A +V W AL+ G V + +E A R++ + +
Sbjct: 358 DMYSGLGEMDEAEKQFKQMGRAASNVSWNALIAGYVLNEKIEKAMEAFCRMV--KEDVAC 415
Query: 536 NYVMLANLFAYAGRWSDLARTRQ 558
N +N+F + LA T Q
Sbjct: 416 NEFTYSNIFKACSSFPSLATTVQ 438
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 147/314 (46%), Gaps = 13/314 (4%)
Query: 215 FSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVE 274
+ ++R++ + +S T+ + A +L +G+ +HA + +GL T+ L+
Sbjct: 787 YRVYRNISTHRTFQSSSDTYAKAIDMYARDRALYRGRALHAHLVIIGLARLTYFAAKLMS 846
Query: 275 MYCRYQDLVAAQMAFDEIENIE-----NLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLT 329
Y L A+ FD+I N L G GF A+ FSEM L
Sbjct: 847 FYTECGQLSNARKLFDKIPNTNIRRWIVLTGACARRGFYEE-----ALSAFSEMQKEGLR 901
Query: 330 PDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLA 389
P+ + + IL AC L+ G+ +H ++ ++SD +I +AL+ MY+KCG ++ A
Sbjct: 902 PNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRV 961
Query: 390 YKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSI 449
+ I DLV NAM++ YA HG E + +++ +G +P+ +S+ + ++ G
Sbjct: 962 FDWIVDKDLVVMNAMVSGYAQHGFVHEALBLVQKMQQAGVKPNVVSWNTLIAGFSQVGDK 1021
Query: 450 KTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKI---PMAPDSVMWGAL 506
SE F LM V+P + +T ++ + E ++ K++ P SV +L
Sbjct: 1022 SMVSEVFRLMTANGVEPDVVSWTSVISGFVQNFHNHEGFDAFKEMLDQGFCPSSVTISSL 1081
Query: 507 LGGCVSHGNLEFGQ 520
L C + NL G+
Sbjct: 1082 LPACTNVANLRHGK 1095
>gi|224107052|ref|XP_002333576.1| predicted protein [Populus trichocarpa]
gi|222837227|gb|EEE75606.1| predicted protein [Populus trichocarpa]
Length = 781
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 202/613 (32%), Positives = 308/613 (50%), Gaps = 99/613 (16%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG +D A+ VF +M ++D VS
Sbjct: 147 MYAKCGDIDHARSVFGLMVDKDSVS----------------------------------- 171
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
W+++I G QN E+A+ M+ GL P+ L S L +CA L + LG++ HG
Sbjct: 172 -WNSMITGLDQNKCFEDAVKSYNSMRKTGLMPSNFALISALSSCASLGCILLGQQTHGEG 230
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G DM ++ NT++ Y E +AE +
Sbjct: 231 IKLGL------------------DMDVSVS-------------NTLLALYAETSRLAECQ 259
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDN-SLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
++F M ++R +SWN++I D+ + EA +F ++ MR G P TF ++L
Sbjct: 260 KVFSWM----LERDQVSWNTVIGALADSGASVSEAIEVFLEM-MRAGWSPNRVTFINLLA 314
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
+ +++ + +IHAL + ++ D + AL+ Y + E+EN E +
Sbjct: 315 TVSSLSTSKLSHQIHALILKYNVKDDNAIENALLACYGKS----------GEMENCEEIF 364
Query: 300 GKMKE-----------DGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATM 348
+M E G+ N AM L M+ D +T +LSAC+++AT+
Sbjct: 365 SRMSERRDEVSWNSMISGYIHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATL 424
Query: 349 ERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAY 408
E G +VHA AIR +SDV IG+ALVDMY+KCG + +A + + +L S N+M++ Y
Sbjct: 425 ECGMEVHACAIRACLESDVVIGSALVDMYSKCGRIDYASRFFNLMPVRNLYSWNSMISGY 484
Query: 409 AMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPS 467
A HGHG + F R+ SG PDHI+F+ LSAC H G + G E+F M Y + P
Sbjct: 485 ARHGHGDNALRLFTRMKLSGQLPDHITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPR 544
Query: 468 LKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN---LEFGQIAAD 524
++HY+CMVDLL RAGEL + FI K+P+ P+ ++W +LG C GN E G+ AA+
Sbjct: 545 VEHYSCMVDLLGRAGELDKIENFINKMPIKPNILIWRTVLGACC-RGNGRKTELGRRAAE 603
Query: 525 RLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFR 584
L ++P N NYV+L+N++A G+W D+ARTR+ M++ + K GCSW+ +D +H F
Sbjct: 604 MLFNMDPQNAVNYVLLSNMYASGGKWEDMARTRRAMREAAVKKEAGCSWVTMKDGVHVFV 663
Query: 585 ASDRSHDRSEEIY 597
A D SH IY
Sbjct: 664 AGDNSHPEKGLIY 676
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 125/475 (26%), Positives = 216/475 (45%), Gaps = 53/475 (11%)
Query: 52 LDNETP--NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACAR-LQ 108
L +E P N V+W+ +I G+TQNG E+A G+L M EG PN S + AC +
Sbjct: 57 LFDEMPDRNGVTWACLISGYTQNGMPEDACGVLKEMIFEGFLPNRFAFGSAIRACQESML 116
Query: 109 KLSLGKEFHGYITRNGFMSNPFVV-NGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTII 167
G++ HGY R G V NGL+++Y +CGD
Sbjct: 117 WRRKGRQVHGYAIRTGLNDAKVAVGNGLINMYAKCGD----------------------- 153
Query: 168 VGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGI 227
+ AR +F M V + +SWNSMI+G N +++A + + + G+
Sbjct: 154 --------IDHARSVFGLM----VDKDSVSWNSMITGLDQNKCFEDAVKSYNS-MRKTGL 200
Query: 228 EPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQM 287
P++F S L +CA + + G++ H I LGL D V L+ +Y L Q
Sbjct: 201 MPSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAECQK 260
Query: 288 AF------DEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSA 341
F D++ + ++G + + G + A+++F EM+ +P+ T +L+
Sbjct: 261 VFSWMLERDQV-SWNTVIGALADSGASVS----EAIEVFLEMMRAGWSPNRVTFINLLAT 315
Query: 342 CSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST-PDLVS 400
SSL+T + Q+HA ++ D I AL+ Y K G +++ + R+S D VS
Sbjct: 316 VSSLSTSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVS 375
Query: 401 QNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA 460
N+M++ Y + + + ++ G R D +F + LSAC +++ G E
Sbjct: 376 WNSMISGYIHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLECGMEVHACAI 435
Query: 461 YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
++ + + +VD+ S+ G + A F +P+ + W +++ G HG+
Sbjct: 436 RACLESDVVIGSALVDMYSKCGRIDYASRFFNLMPV-RNLYSWNSMISGYARHGH 489
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 99/397 (24%), Positives = 183/397 (46%), Gaps = 39/397 (9%)
Query: 116 FHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGN 175
FH + ++GF S+ F+ N L++VY R GD +SA K+F + +N V+ +I GY +NG
Sbjct: 22 FHLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNG- 80
Query: 176 VAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFG 235
+ ++A + ++++ +G P F FG
Sbjct: 81 ----------------------------------MPEDACGVLKEMIF-EGFLPNRFAFG 105
Query: 236 SVLIACAD-MNSLRKGKEIHALAIALGLQ-SDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
S + AC + M RKG+++H AI GL + VG L+ MY + D+ A+ F +
Sbjct: 106 SAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVAVGNGLINMYAKCGDIDHARSVFGLMV 165
Query: 294 NIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ 353
+ +++ G + N +A++ ++ M L P + + LS+C+SL + G+Q
Sbjct: 166 DKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMPSNFALISALSSCASLGCILLGQQ 225
Query: 354 VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGH 413
H I+ G D DV + L+ +YA+ L + + + D VS N ++ A A G
Sbjct: 226 THGEGIKLGLDMDVSVSNTLLALYAETSRLAECQKVFSWMLERDQVSWNTVIGALADSGA 285
Query: 414 G-KEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYT 472
E I F ++ +G+ P+ ++F++ L+ + K + L+ Y+VK
Sbjct: 286 SVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSKLSHQIHALILKYNVKDDNAIEN 345
Query: 473 CMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
++ ++GE+ E ++ D V W +++ G
Sbjct: 346 ALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISG 382
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 123/268 (45%), Gaps = 11/268 (4%)
Query: 253 IHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVY 312
H + G SD F+ L+ +Y R D V+A+ FDE+ + + G+ N
Sbjct: 22 FHLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNGM 81
Query: 313 TWNAMQLFSEMLSLDLTPDIYTVGIILSACS-SLATMERGKQVHAYAIRCGY-DSDVHIG 370
+A + EM+ P+ + G + AC S+ +G+QVH YAIR G D+ V +G
Sbjct: 82 PEDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVAVG 141
Query: 371 TALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFR 430
L++MYAKCG + HAR + + D VS N+M+T + ++ + + + +G
Sbjct: 142 NGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLM 201
Query: 431 PDHISFLSALSACVHAGSI----KTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGE 486
P + + +SALS+C G I +T E L DV S ++ L + L E
Sbjct: 202 PSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVS----NTLLALYAETSRLAE 257
Query: 487 AYEFIKKIPMAPDSVMWGALLGGCVSHG 514
+ + + D V W ++G G
Sbjct: 258 CQKVFSWM-LERDQVSWNTVIGALADSG 284
>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 750
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 186/592 (31%), Positives = 314/592 (53%), Gaps = 27/592 (4%)
Query: 11 AKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFT 70
A+ +F MP +D SWN ++T A N + +A + M D +VSW+A++ G+
Sbjct: 83 ARDLFDKMPHKDLFSWNLMLTGYARNRRLRDARMLFDSMPEKD-----VVSWNAMLSGYV 137
Query: 71 QNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPF 130
++G+ +EA + RM + N+ + + +L A R +L + + +S
Sbjct: 138 RSGHVDEARDVFDRMPHK----NSISWNGLLAAYVRSGRLEEARRLFESKSDWELIS--- 190
Query: 131 VVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLG 190
N L+ Y + + A ++F + +++ +S NT+I GY ++G++++AR LF++
Sbjct: 191 -CNCLMGGYVKRNMLGDARQLFDQIPVRDLISWNTMISGYAQDGDLSQARRLFEE----S 245
Query: 191 VQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKG 250
R + +W +M+ YV + + DEA +F ++ + ++ ++ A + G
Sbjct: 246 PVRDVFTWTAMVYAYVQDGMLDEARRVFDEM-----PQKREMSYNVMIAGYAQYKRMDMG 300
Query: 251 KEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPN 310
+E+ + S ++ YC+ DL A+ FD + +++ G+ N
Sbjct: 301 RELFEEMPFPNIGS----WNIMISGYCQNGDLAQARNLFDMMPQRDSVSWAAIIAGYAQN 356
Query: 311 VYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIG 370
AM + EM + + T LSAC+ +A +E GKQVH +R GY+ +G
Sbjct: 357 GLYEEAMNMLVEMKRDGESLNRSTFCCALSACADIAALELGKQVHGQVVRTGYEKGCLVG 416
Query: 371 TALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFR 430
ALV MY KCG + A ++ + D+VS N ML YA HG G++ + F ++ +G +
Sbjct: 417 NALVGMYCKCGCIDEAYDVFQGVQHKDIVSWNTMLAGYARHGFGRQALTVFESMITAGVK 476
Query: 431 PDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYE 489
PD I+ + LSAC H G G+E+F M Y + P+ KHY CM+DLL RAG L EA
Sbjct: 477 PDEITMVGVLSACSHTGLTDRGTEYFHSMNKDYGITPNSKHYACMIDLLGRAGCLEEAQN 536
Query: 490 FIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGR 549
I+ +P PD+ WGALLG HGN+E G+ AA+ + ++EP+N+G YV+L+NL+A +GR
Sbjct: 537 LIRNMPFEPDAATWGALLGASRIHGNMELGEQAAEMVFKMEPHNSGMYVLLSNLYAASGR 596
Query: 550 WSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
W D+++ R KM+ + K+PG SW+E +++IH F D H IY ++
Sbjct: 597 WVDVSKMRLKMRQIGVQKTPGYSWVEVQNKIHTFTVGDCFHPEKGRIYAFLE 648
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 113/272 (41%), Gaps = 39/272 (14%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y + G L A+ +F MMP+RD VSW +++ A NGL
Sbjct: 322 YCQNGDLAQARNLFDMMPQRDSVSWAAIIAGYAQNGLY---------------------- 359
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
EEA+ ML M+ +G N T L ACA + L LGK+ HG +
Sbjct: 360 --------------EEAMNMLVEMKRDGESLNRSTFCCALSACADIAALELGKQVHGQVV 405
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
R G+ V N LV +Y +CG + A +F K+ VS NT++ GY +G +A
Sbjct: 406 RTGYEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQHKDIVSWNTMLAGYARHGFGRQALT 465
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
+F+ M GV+ I+ ++S L D F + GI P S + ++
Sbjct: 466 VFESMITAGVKPDEITMVGVLSACSHTGLTDRGTEYFHSMNKDYGITPNSKHYACMIDLL 525
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALV 273
L +E L + + D GAL+
Sbjct: 526 GRAGCL---EEAQNLIRNMPFEPDAATWGALL 554
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 95/429 (22%), Positives = 174/429 (40%), Gaps = 58/429 (13%)
Query: 126 MSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQ 185
+ N N ++ Y R A +F K K+ S N ++ GY N + +AR LFD
Sbjct: 61 LRNSVSYNAMISGYLRNAKFSLARDLFDKMPHKDLFSWNLMLTGYARNRRLRDARMLFDS 120
Query: 186 MEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMN 245
M ++ ++SWN+M+SGYV + DEA +F + ++ I ++ +L A
Sbjct: 121 MP----EKDVVSWNAMLSGYVRSGHVDEARDVFDRMPHKNSI-----SWNGLLAAYVRSG 171
Query: 246 SLRKGKEIHALAIALGLQS-DTFVGGALVEMYCRYQDLVAAQMAFDEIE-----NIENLL 299
L + + + L S + +GG Y + L A+ FD+I + ++
Sbjct: 172 RLEEARRLFESKSDWELISCNCLMGG-----YVKRNMLGDARQLFDQIPVRDLISWNTMI 226
Query: 300 GKMKEDG--------FEP----NVYTWNAM--------------QLFSEMLSLDLTPDIY 333
+DG FE +V+TW AM ++F EM
Sbjct: 227 SGYAQDGDLSQARRLFEESPVRDVFTWTAMVYAYVQDGMLDEARRVFDEMPQ----KREM 282
Query: 334 TVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRI 393
+ ++++ + M+ G+++ ++ ++ Y + G L AR + +
Sbjct: 283 SYNVMIAGYAQYKRMDMGRELFEEMPF----PNIGSWNIMISGYCQNGDLAQARNLFDMM 338
Query: 394 STPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGS 453
D VS A++ YA +G +E + + G + +F ALSAC +++ G
Sbjct: 339 PQRDSVSWAAIIAGYAQNGLYEEAMNMLVEMKRDGESLNRSTFCCALSACADIAALELGK 398
Query: 454 EFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSH 513
+ + + +V + + G + EAY+ + + D V W +L G H
Sbjct: 399 QVHGQVVRTGYEKGCLVGNALVGMYCKCGCIDEAYDVFQGV-QHKDIVSWNTMLAGYARH 457
Query: 514 GNLEFGQIA 522
G FG+ A
Sbjct: 458 G---FGRQA 463
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 83/197 (42%), Gaps = 8/197 (4%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG +D+A VF+ + +D VSWN+++ A +G +AL E M + P+ +
Sbjct: 422 MYCKCGCIDEAYDVFQGVQHKDIVSWNTMLAGYARHGFGRQALTVFESMITA-GVKPDEI 480
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
+ V+ + G + M + G+ PN++ + ++ R L +E
Sbjct: 481 TMVGVLSACSHTGLTDRGTEYFHSMNKDYGITPNSKHYACMIDLLGRAGCL---EEAQNL 537
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDM---LSALKIFSKFSIKNEVSCNTIIVGYCENGNV 176
I F + L+ R G+M A ++ K N + Y +G
Sbjct: 538 IRNMPFEPDAATWGALLGASRIHGNMELGEQAAEMVFKMEPHNSGMYVLLSNLYAASGRW 597
Query: 177 AEARELFDQMEHLGVQR 193
+ ++ +M +GVQ+
Sbjct: 598 VDVSKMRLKMRQIGVQK 614
>gi|359492976|ref|XP_002283668.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 762
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 193/626 (30%), Positives = 312/626 (49%), Gaps = 112/626 (17%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KCG+++ A+KVF +P R N+V
Sbjct: 113 VYAKCGTMETARKVFDELPRR------------------------------------NVV 136
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ ++ G+ + E A+ + M G P TL + L A + L LGK+ HGY
Sbjct: 137 SWTTLMTGYVHDSKPELAVQVFREMLEAGAYPTNYTLGTALSASSDLHSKELGKQIHGYS 196
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ + + N L +Y +CG + A+K F + KN
Sbjct: 197 IKYRIEFDASIGNSLCSLYSKCGSLECAVKAFRRIRDKN--------------------- 235
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+ISW ++IS + DN F ++L + +EP FT S L
Sbjct: 236 --------------VISWTTVISAWGDNGEAATGLQFFVEML-SECVEPNEFTLTSALSL 280
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C M SL G +IH+L I LG +S+ + +++ +Y + + A+ FDE+E I
Sbjct: 281 CCVMQSLDIGTQIHSLTIKLGFESNLPIKNSIMYLYLKCGWIHEAKKLFDEMETI----- 335
Query: 301 KMKEDGFEPNVYTWNAM------------------QLFSEMLSLDLT-------PDIYTV 335
++ TWNAM Q +E LS+ L PD++T
Sbjct: 336 ---------SLVTWNAMIAGHARMMDFAKDDLAAHQCGTEALSIFLKLNRSGMKPDLFTF 386
Query: 336 GIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST 395
+LS CSSL +E+G+QVHA I+ G+ SDV +GTALV+MY KCGS++ A A+ +S
Sbjct: 387 SSVLSVCSSLVALEQGEQVHAQTIKTGFLSDVVVGTALVNMYNKCGSIERASKAFVEMSI 446
Query: 396 PDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEF 455
L+S +M+T YA +G ++ + F + +G RP+ I+F+ LSAC HAG + ++
Sbjct: 447 RTLISWTSMITGYAQNGQPQQALLLFEDMRLAGVRPNKITFVGVLSACSHAGMVDEALDY 506
Query: 456 FDLMA-YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
F +M Y + P + HY C++D+ R G L EA++FIK++ + P+ +W L+ GC S G
Sbjct: 507 FQMMKNEYKITPVMDHYACLIDMFVRLGRLDEAFDFIKEMDLEPNEFIWSILIAGCRSQG 566
Query: 515 NLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWI 574
LE G AA++L+ L+P +T Y +L N++ AG+W +++R R+ MK+ ++ + SWI
Sbjct: 567 KLELGFYAAEQLLNLKPKDTETYNLLLNMYLSAGKWKEVSRVRKMMKEEKLGRLKDWSWI 626
Query: 575 EDRDEIHKFRASDRSHDRSEEIYTII 600
+D+I+ F+ + RSH +S E+Y ++
Sbjct: 627 SIKDKIYSFKRNARSHAQSGEMYELL 652
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 126/499 (25%), Positives = 227/499 (45%), Gaps = 73/499 (14%)
Query: 88 EGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLS 147
EG + + +L C + +S ++ H +I + G + F++ LV+VY +CG M +
Sbjct: 63 EGTKVESAFYVPILQECIDKKLVSDAQKIHAHIVKTGAHKDAFLMTFLVNVYAKCGTMET 122
Query: 148 ALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVD 207
A K+F + +N VS T++ GY + D L VQ
Sbjct: 123 ARKVFDELPRRNVVSWTTLMTGY-----------VHDSKPELAVQ--------------- 156
Query: 208 NSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTF 267
+FR++L G PT++T G+ L A +D++S GK+IH +I ++ D
Sbjct: 157 ---------VFREML-EAGAYPTNYTLGTALSASSDLHSKELGKQIHGYSIKYRIEFDAS 206
Query: 268 VGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLD 327
+G +L +Y + L A AF I + + + N +Q F EMLS
Sbjct: 207 IGNSLCSLYSKCGSLECAVKAFRRIRDKNVISWTTVISAWGDNGEAATGLQFFVEMLSEC 266
Query: 328 LTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHAR 387
+ P+ +T+ LS C + +++ G Q+H+ I+ G++S++ I +++ +Y KCG + A+
Sbjct: 267 VEPNEFTLTSALSLCCVMQSLDIGTQIHSLTIKLGFESNLPIKNSIMYLYLKCGWIHEAK 326
Query: 388 LAYKRISTPDLVSQNAMLTAY-----------AMHGHGKEGIAHFRRILASGFRPDHISF 436
+ + T LV+ NAM+ + A H G E ++ F ++ SG +PD +F
Sbjct: 327 KLFDEMETISLVTWNAMIAGHARMMDFAKDDLAAHQCGTEALSIFLKLNRSGMKPDLFTF 386
Query: 437 LSALSAC-----------VHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELG 485
S LS C VHA +IKTG F DV T +V++ ++ G +
Sbjct: 387 SSVLSVCSSLVALEQGEQVHAQTIKTG--FLS-----DVVVG----TALVNMYNKCGSIE 435
Query: 486 EAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAAD--RLIELEPNNTGNYVMLANL 543
A + ++ + + W +++ G +G + + + RL + PN +V + +
Sbjct: 436 RASKAFVEMSIRT-LISWTSMITGYAQNGQPQQALLLFEDMRLAGVRPNKI-TFVGVLSA 493
Query: 544 FAYAGRWSDLARTRQKMKD 562
++AG + Q MK+
Sbjct: 494 CSHAGMVDEALDYFQMMKN 512
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 143/294 (48%), Gaps = 3/294 (1%)
Query: 218 FRDLL--MRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEM 275
FR+ L +R+G + S + +L C D + ++IHA + G D F+ LV +
Sbjct: 54 FREALSFIREGTKVESAFYVPILQECIDKKLVSDAQKIHAHIVKTGAHKDAFLMTFLVNV 113
Query: 276 YCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTV 335
Y + + A+ FDE+ + G+ + A+Q+F EML P YT+
Sbjct: 114 YAKCGTMETARKVFDELPRRNVVSWTTLMTGYVHDSKPELAVQVFREMLEAGAYPTNYTL 173
Query: 336 GIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST 395
G LSA S L + E GKQ+H Y+I+ + D IG +L +Y+KCGSL+ A A++RI
Sbjct: 174 GTALSASSDLHSKELGKQIHGYSIKYRIEFDASIGNSLCSLYSKCGSLECAVKAFRRIRD 233
Query: 396 PDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEF 455
+++S +++A+ +G G+ F +L+ P+ + SALS C S+ G++
Sbjct: 234 KNVISWTTVISAWGDNGEAATGLQFFVEMLSECVEPNEFTLTSALSLCCVMQSLDIGTQI 293
Query: 456 FDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
L + +L ++ L + G + EA + ++ V W A++ G
Sbjct: 294 HSLTIKLGFESNLPIKNSIMYLYLKCGWIHEAKKLFDEMETI-SLVTWNAMIAG 346
>gi|449433569|ref|XP_004134570.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 705
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 177/548 (32%), Positives = 299/548 (54%), Gaps = 26/548 (4%)
Query: 57 PNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEF 116
P ++W +VI +T +G +++G M A GL P+ SVL +CA L L+LG+
Sbjct: 69 PPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESL 128
Query: 117 HGYITRNGFMSNPFVVNGLVDVYRRCG-------DMLSALKIFSKFSIKNEVSCNTIIVG 169
HGYI R G + + N L+++Y + L A ++F + + + S T+ V
Sbjct: 129 HGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTR-SVRTVSV- 186
Query: 170 YCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEP 229
E+ R++F+ M ++ ++SWN++I+G N LY+E M R++ + ++P
Sbjct: 187 LSEDS----VRKIFEMMP----EKDLVSWNTIIAGNARNGLYEETLRMIREMGGAN-LKP 237
Query: 230 TSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAF 289
SFT SVL A+ + +GKEIH +I GL +D +V +L++MY + + + F
Sbjct: 238 DSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVF 297
Query: 290 DEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATME 349
+ + + G N ++ F +ML + P Y+ I+ AC+ L T+
Sbjct: 298 TLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLH 357
Query: 350 RGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYA 409
GKQ+H Y R G+D ++ I ++LVDMYAKCG+++ A+ + R+ D+VS AM+ A
Sbjct: 358 LGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCA 417
Query: 410 MHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSL 468
+HG + I F ++ G + + L+AC H G + ++F+ M + + P +
Sbjct: 418 LHGQAPDAIELFEQMETEGIK-------AVLTACSHGGLVDEAWKYFNSMTRDFGIAPGV 470
Query: 469 KHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIE 528
+HY + DLL RAG L EAY+FI + + P +W LL C H N++ + A+R++E
Sbjct: 471 EHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSACRVHKNIDMAEKVANRILE 530
Query: 529 LEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDR 588
++PNNTG Y++LAN+++ A RW + A+ R M+ + K+P CSWIE +++++ F A D
Sbjct: 531 VDPNNTGAYILLANIYSAARRWKEAAKWRASMRRIGIRKTPACSWIEVKNKVYAFMAGDE 590
Query: 589 SHDRSEEI 596
SH E+I
Sbjct: 591 SHPCYEKI 598
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 121/237 (51%), Gaps = 43/237 (18%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC + D+ +VF ++ ERD +SWNS++ C NGL E L +M
Sbjct: 283 MYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQM----------- 331
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+ A+ ++P + + SS++PACA L L LGK+ HGYI
Sbjct: 332 ------------------------LMAK-IKPKSYSFSSIMPACAHLTTLHLGKQLHGYI 366
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
TRNGF N F+ + LVD+Y +CG++ +A +IF + +++ VS +I+G +G +A
Sbjct: 367 TRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAI 426
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
ELF+QME G++ ++++ L DEA+ F + GI P + +V
Sbjct: 427 ELFEQMETEGIK-------AVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAV 476
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 166/381 (43%), Gaps = 80/381 (20%)
Query: 7 SLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVI 66
S D +K+F+MMPE+D VSWN+++ A NGL E L
Sbjct: 188 SEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLR---------------------- 225
Query: 67 GGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFM 126
M+ M L+P++ TLSSVLP A +S GKE HG R G
Sbjct: 226 --------------MIREMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLD 271
Query: 127 SNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQM 186
++ +V + L+D+Y +C + + ++F+ + ++ +S N+II G +NG
Sbjct: 272 ADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNG------------ 319
Query: 187 EHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNS 246
L+DE FR +LM I+P S++F S++ ACA + +
Sbjct: 320 -----------------------LFDEGLRFFRQMLMAK-IKPKSYSFSSIMPACAHLTT 355
Query: 247 LRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDG 306
L GK++H G + F+ +LV+MY + ++ A+ FD + + + G
Sbjct: 356 LHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMG 415
Query: 307 FEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG-KQVHAYAIRCGYDS 365
+ +A++LF +M + + +L+ACS ++ K ++ G
Sbjct: 416 CALHGQAPDAIELFEQM-------ETEGIKAVLTACSHGGLVDEAWKYFNSMTRDFGIAP 468
Query: 366 DVHIGTALVDMYAKCGSLKHA 386
V A+ D+ + G L+ A
Sbjct: 469 GVEHYAAVSDLLGRAGRLEEA 489
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 56/117 (47%), Gaps = 9/117 (7%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG++ AK++F M RD VSW +++ CA +G +A+E E+M ET +
Sbjct: 384 MYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQM-----ETEGI- 437
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEF 116
AV+ + G +EA M + G+ P ++V R +L +F
Sbjct: 438 --KAVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDF 492
>gi|125534384|gb|EAY80932.1| hypothetical protein OsI_36110 [Oryza sativa Indica Group]
Length = 770
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 182/614 (29%), Positives = 308/614 (50%), Gaps = 87/614 (14%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y +CG+ DA+++F MPER N+V+
Sbjct: 123 YMRCGAARDARRLFDGMPER------------------------------------NVVT 146
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W+A++ G+T N + + M G P+ TL + L AC + LGK+ HGY
Sbjct: 147 WTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGKQVHGYAI 206
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
+ G S + N L +Y + G + SAL+ F + KN
Sbjct: 207 KYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKN---------------------- 244
Query: 182 LFDQMEHLGVQRGIISWNSMISGYV-DNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+I+W +MIS D + S+F D+LM DG+ P FT SV+
Sbjct: 245 -------------VITWTTMISACAEDEECVELGLSLFIDMLM-DGVMPNEFTLTSVMSL 290
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE---- 296
C L GK++ A + +G +++ V + + +Y R + A F+++E+
Sbjct: 291 CGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITW 350
Query: 297 --------NLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATM 348
++ K+D + + A+ +F ++ + PD++T ILS CS++ +
Sbjct: 351 NAMISGYAQIMDSAKDD-LQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMAL 409
Query: 349 ERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAY 408
E+G+Q+HA I+ G+ SDV + +ALV+MY KCG ++ A A+ + T V+ +M++ Y
Sbjct: 410 EQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGY 469
Query: 409 AMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPS 467
+ HG +E I F + +G RP+ I+F+S LSAC +AG ++ +FD+M Y ++P
Sbjct: 470 SQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPV 529
Query: 468 LKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLI 527
+ HY CM+D+ R G + +A+ FIK+ P+ +W +L+ GC SHGN+E AAD+L+
Sbjct: 530 VDHYGCMIDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLL 589
Query: 528 ELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASD 587
EL+P Y++L N++ RW D+AR R+ MK + SWI +D+++ FRA+D
Sbjct: 590 ELKPKGIETYILLLNMYISTERWQDVARVRKLMKQEDVGILRDRSWITIKDKVYFFRAND 649
Query: 588 RSHDRSEEIYTIID 601
R+H ++ E+Y +++
Sbjct: 650 RTHPQATELYQLLE 663
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 114/501 (22%), Positives = 207/501 (41%), Gaps = 84/501 (16%)
Query: 76 EEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGL 135
+EA+ ML EG + +L C + L + HG++ + G ++ FV L
Sbjct: 64 QEAMTML----TEGKAVQSAMYVPLLHRCVEMGSLGAARAVHGHMAKTGAGADMFVATSL 119
Query: 136 VDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGI 195
V+ Y RCG A ++F +N V+ ++ GY N A E+F +M +G
Sbjct: 120 VNAYMRCGAARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRY--- 176
Query: 196 ISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHA 255
P+ +T G+ L AC + GK++H
Sbjct: 177 ---------------------------------PSHYTLGATLNACLASCDVDLGKQVHG 203
Query: 256 LAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWN 315
AI G +S T +G +L +Y + L +A AF I E NV TW
Sbjct: 204 YAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIP--------------EKNVITWT 249
Query: 316 AM---------------QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
M LF +ML + P+ +T+ ++S C + + GKQV A++ +
Sbjct: 250 TMISACAEDEECVELGLSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFK 309
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAM---------- 410
G ++++ + + + +Y + G A ++++ +++ NAM++ YA
Sbjct: 310 IGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQ 369
Query: 411 -HGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLK 469
G + + FR + S +PD +F S LS C +++ G + +
Sbjct: 370 ARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVV 429
Query: 470 HYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN-LEFGQIAAD-RLI 527
+ +V++ ++ G + +A + ++P V W +++ G HG E Q+ + RL
Sbjct: 430 VNSALVNMYNKCGCIQDANKAFLEMP-TRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLA 488
Query: 528 ELEPNNTGNYVMLANLFAYAG 548
+ PN +V L + +YAG
Sbjct: 489 GVRPNEI-TFVSLLSACSYAG 508
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 116/430 (26%), Positives = 186/430 (43%), Gaps = 92/430 (21%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y K GSLD A + F +PE++ ++W ++++ACA E EC+E
Sbjct: 223 LYAKLGSLDSALRAFWRIPEKNVITWTTMISACA------EDEECVEL------------ 264
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+ + M +G+ PN TL+SV+ C L+LGK+ +
Sbjct: 265 -----------------GLSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFS 307
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G +N V N + +Y R G+ A+++F
Sbjct: 308 FKIGCETNLPVKNSTMYLYLRKGETDEAMRLF---------------------------- 339
Query: 181 ELFDQMEHLGVQRGIISWNSMISGY---VDNSLYD--------EAFSMFRDLLMRDGIEP 229
+QME II+WN+MISGY +D++ D +A ++FRD L R ++P
Sbjct: 340 ---EQME----DASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRD-LKRSVMKP 391
Query: 230 TSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAF 289
FTF S+L C+ M +L +G++IHA I G SD V ALV MY + + A AF
Sbjct: 392 DLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAF 451
Query: 290 DEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATME 349
E+ + G+ + A+QLF EM + P+ T +LSACS +E
Sbjct: 452 LEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVE 511
Query: 350 RGKQV-----HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNA 403
+ Y I D H G ++DM+ + G ++ A KR P+ ++
Sbjct: 512 EAEHYFDMMKKEYCIEPVVD---HYG-CMIDMFVRLGRVEDAFSFIKRTGFEPNEAIWSS 567
Query: 404 MLTAYAMHGH 413
++ HG+
Sbjct: 568 LVAGCRSHGN 577
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 90/200 (45%), Gaps = 12/200 (6%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG + DA K F MP R V+W S+++ + +G EA++ E M L PN +
Sbjct: 437 MYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEM-RLAGVRPNEI 495
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
++ +++ + G EEA M+ E +EP ++ RL ++ ++ +
Sbjct: 496 TFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRV---EDAFSF 552
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKF------SIKNEVSCNTIIVGYCEN 173
I R GF N + + LV R G+M A K I+ + + +
Sbjct: 553 IKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLELKPKGIETYILLLNMYISTERW 612
Query: 174 GNVAEARELFDQMEHLGVQR 193
+VA R+L Q E +G+ R
Sbjct: 613 QDVARVRKLMKQ-EDVGILR 631
>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
Length = 748
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 189/581 (32%), Positives = 303/581 (52%), Gaps = 48/581 (8%)
Query: 22 DCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGM 81
D + ++V A G V +A + M D + +W+A++ G +N EA+G+
Sbjct: 103 DAFASGALVHAYLRFGRVRDAYRAFDEMRHRD-----VPAWNAMLSGLCRNARAAEAVGL 157
Query: 82 LFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRR 141
RM EG+ +A T+SSVLP C L +L H Y ++G FV N ++DVY +
Sbjct: 158 FGRMVMEGVAGDAVTVSSVLPMCVLLGDRALALAMHLYAVKHGLDDELFVCNAMIDVYGK 217
Query: 142 CGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSM 201
G ML E R++FD M R +++WNS+
Sbjct: 218 LG-MLE------------------------------EVRKVFDGMS----SRDLVTWNSI 242
Query: 202 ISGYVDNSLYDEAFSMFRDLLMRD-GIEPTSFTFGSVLIACADMNSLRKGKEIHALAIAL 260
ISG+ A MF MRD G+ P T S+ A A + G+ +H +
Sbjct: 243 ISGHEQGGQVASAVEMFCG--MRDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRR 300
Query: 261 GLQ-SDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQL 319
G D G A+V+MY + + AAQ FD + + + G+ N A+ +
Sbjct: 301 GWDVGDIIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHV 360
Query: 320 FSEMLSLD-LTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYA 378
+ M + L P T +L A S L +++G ++HA +I+ G + DV++GT ++D+YA
Sbjct: 361 YDHMQKHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNLDVYVGTCVIDLYA 420
Query: 379 KCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLS 438
KCG L A L +++ NA+++ +HGHG + ++ F ++ G PDH++F+S
Sbjct: 421 KCGKLDEAMLLFEQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQQEGISPDHVTFVS 480
Query: 439 ALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMA 497
L+AC HAG + G FF++M Y +KP KHY CMVD+ RAG+L +A++FI+ +P+
Sbjct: 481 LLAACSHAGLVDQGRNFFNMMQTAYGIKPIAKHYACMVDMFGRAGQLDDAFDFIRNMPIK 540
Query: 498 PDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTR 557
PDS +WGALLG C HGN+E G++A+ L EL+P N G YV+++N++A G+W + R
Sbjct: 541 PDSAIWGALLGACRIHGNVEMGKVASQNLFELDPKNVGYYVLMSNMYAKVGKWDGVDEVR 600
Query: 558 QKMKDRRMHKSPGCSWIEDRDEIHKFRASDRS--HDRSEEI 596
++ + + K+PG S IE + ++ F + ++ H + EEI
Sbjct: 601 SLVRRQNLQKTPGWSSIEVKRSVNVFYSGNQMNIHPQHEEI 641
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 106/424 (25%), Positives = 183/424 (43%), Gaps = 82/424 (19%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+YGK G L++ +KVF M RD V+WNS+++ G V A+E
Sbjct: 214 VYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGHEQGGQVASAVE---------------- 257
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
M M+ G+ P+ TL S+ A A+ + G+ H Y+
Sbjct: 258 --------------------MFCGMRDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYM 297
Query: 121 TRNGF-MSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
R G+ + + N +VD+Y + + +A ++F +++ VS NT+I GY +NG +EA
Sbjct: 298 VRRGWDVGDIIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEA 357
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
++D M+ +G++P TF SVL
Sbjct: 358 IHVYDHMQK-----------------------------------HEGLKPIQGTFVSVLP 382
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
A + + +L++G +HAL+I GL D +VG ++++Y + L A + F++
Sbjct: 383 AYSHLGALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGP 442
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVH---- 355
G + + A+ LFS+M ++PD T +L+ACS +++G+
Sbjct: 443 WNAVISGVGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAACSHAGLVDQGRNFFNMMQ 502
Query: 356 -AYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNAMLTAYAMHGH 413
AY I+ +VDM+ + G L A + + PD A+L A +HG+
Sbjct: 503 TAYGIK----PIAKHYACMVDMFGRAGQLDDAFDFIRNMPIKPDSAIWGALLGACRIHGN 558
Query: 414 GKEG 417
+ G
Sbjct: 559 VEMG 562
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 132/287 (45%), Gaps = 8/287 (2%)
Query: 231 SFTFGSVLIACADMNSLRKGKEIHALAIALGL-QSDTFVGGALVEMYCRYQDLVAAQMAF 289
+FTF +L A + ++HA A+ LGL + D F GALV Y R+ + A AF
Sbjct: 71 AFTFPPLLRAAQGPGT---AAQLHACALRLGLLRGDAFASGALVHAYLRFGRVRDAYRAF 127
Query: 290 DEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATME 349
DE+ + + G N A+ LF M+ + D TV +L C L
Sbjct: 128 DEMRHRDVPAWNAMLSGLCRNARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGDRA 187
Query: 350 RGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYA 409
+H YA++ G D ++ + A++D+Y K G L+ R + +S+ DLV+ N++++ +
Sbjct: 188 LALAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGHE 247
Query: 410 MHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY--YDVKPS 467
G + F + SG PD ++ LS SA G I G M +DV
Sbjct: 248 QGGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGDI 307
Query: 468 LKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
+ +VD+ ++ ++ A +P+ D+V W L+ G + +G
Sbjct: 308 IAG-NAIVDMYAKLSKIEAAQRMFDSMPVR-DAVSWNTLITGYMQNG 352
>gi|356567218|ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Glycine max]
Length = 727
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 178/541 (32%), Positives = 288/541 (53%), Gaps = 36/541 (6%)
Query: 57 PNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEF 116
P++ W+A+I +++N + + M M+ G+ P+ T VL AC L L
Sbjct: 117 PDVFMWNAIIRSYSRNNMYRDTVEMYRWMRWTGVHPDGFTFPYVLKACTELLDFGLSCII 176
Query: 117 HGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNV 176
HG I + GF S+ FV NGLV +Y +CG ++
Sbjct: 177 HGQIIKYGFGSDVFVQNGLVALYAKCG-------------------------------HI 205
Query: 177 AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGS 236
A+ +FD + H R I+SW S+ISGY N EA MF + +G++P S
Sbjct: 206 GVAKVVFDGLYH----RTIVSWTSIISGYAQNGKAVEALRMFSQM-RNNGVKPDWIALVS 260
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
+L A D++ L +G+ IH I +GL+ + + +L Y + + A+ FD+++
Sbjct: 261 ILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAKCGLVTVAKSFFDQMKTTN 320
Query: 297 NLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHA 356
++ G+ N + A+ LF M+S ++ PD TV + A + + ++E + +
Sbjct: 321 VIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRSAVLASAQVGSLELAQWMDD 380
Query: 357 YAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKE 416
Y + Y SD+ + T+L+DMYAKCGS++ AR + R S D+V +AM+ Y +HG G E
Sbjct: 381 YVSKSNYGSDIFVNTSLIDMYAKCGSVEFARRVFDRNSDKDVVMWSAMIMGYGLHGQGWE 440
Query: 417 GIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVD 476
I + + +G P+ ++F+ L+AC H+G +K G E F M +++ P +HY+C+VD
Sbjct: 441 AINLYHVMKQAGVFPNDVTFIGLLTACNHSGLVKEGWELFHCMKDFEIVPRNEHYSCVVD 500
Query: 477 LLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGN 536
LL RAG LGEA FI KIP+ P +WGALL C + + G+ AA++L L+P NTG+
Sbjct: 501 LLGRAGYLGEACAFIMKIPIEPGVSVWGALLSACKIYRCVTLGEYAANKLFSLDPYNTGH 560
Query: 537 YVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEI 596
YV L+NL+A + W +A R M+++ ++K G S IE ++ F D+SH ++EI
Sbjct: 561 YVQLSNLYASSCLWDCVAHVRVLMREKGLNKDLGYSVIEINGKLQAFHVGDKSHPMAKEI 620
Query: 597 Y 597
+
Sbjct: 621 F 621
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 172/346 (49%), Gaps = 14/346 (4%)
Query: 174 GNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMR-DGIEPTSF 232
G + AR+LFD+ + V WN++I Y N++Y + M+R MR G+ P F
Sbjct: 102 GQICYARKLFDEFCYPDV----FMWNAIIRSYSRNNMYRDTVEMYR--WMRWTGVHPDGF 155
Query: 233 TFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI 292
TF VL AC ++ IH I G SD FV LV +Y + + A++ FD +
Sbjct: 156 TFPYVLKACTELLDFGLSCIIHGQIIKYGFGSDVFVQNGLVALYAKCGHIGVAKVVFDGL 215
Query: 293 ENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGK 352
+ + G+ N A+++FS+M + + PD + IL A + + +E+G+
Sbjct: 216 YHRTIVSWTSIISGYAQNGKAVEALRMFSQMRNNGVKPDWIALVSILRAYTDVDDLEQGR 275
Query: 353 QVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHG 412
+H + I+ G + + + +L YAKCG + A+ + ++ T +++ NAM++ YA +G
Sbjct: 276 SIHGFVIKMGLEDEPALLISLTAFYAKCGLVTVAKSFFDQMKTTNVIMWNAMISGYAKNG 335
Query: 413 HGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYT 472
H +E + F +++ +PD ++ SA+ A GS++ D ++ + + T
Sbjct: 336 HAEEAVNLFHYMISRNIKPDSVTVRSAVLASAQVGSLELAQWMDDYVSKSNYGSDIFVNT 395
Query: 473 CMVDLLSRAGELGEAYEFIKKI---PMAPDSVMWGALLGGCVSHGN 515
++D+ ++ G + EF +++ D VMW A++ G HG
Sbjct: 396 SLIDMYAKCGSV----EFARRVFDRNSDKDVVMWSAMIMGYGLHGQ 437
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 97/413 (23%), Positives = 163/413 (39%), Gaps = 83/413 (20%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KCG + AK VF + R VSW S+++ A NG +EAL
Sbjct: 198 LYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALR---------------- 241
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
M +M+ G++P+ L S+L A + L G+ HG++
Sbjct: 242 --------------------MFSQMRNNGVKPDWIALVSILRAYTDVDDLEQGRSIHGFV 281
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G P ++ L Y +CG + A F + N + N +I GY +NG+ EA
Sbjct: 282 IKMGLEDEPALLISLTAFYAKCGLVTVAKSFFDQMKTTNVIMWNAMISGYAKNGHAEEAV 341
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LF M IS N I+P S T S ++A
Sbjct: 342 NLFHYM---------ISRN---------------------------IKPDSVTVRSAVLA 365
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
A + SL + + SD FV +L++MY + + A+ FD + + ++
Sbjct: 366 SAQVGSLELAQWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARRVFDRNSDKDVVMW 425
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G+ + W A+ L+ M + P+ T +L+AC+ ++ G ++
Sbjct: 426 SAMIMGYGLHGQGWEAINLYHVMKQAGVFPNDVTFIGLLTACNHSGLVKEGWEL----FH 481
Query: 361 CGYDSDV-----HIGTALVDMYAKCGSLKHARLAYKRIST-PDLVSQNAMLTA 407
C D ++ H + +VD+ + G L A +I P + A+L+A
Sbjct: 482 CMKDFEIVPRNEHY-SCVVDLLGRAGYLGEACAFIMKIPIEPGVSVWGALLSA 533
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 152/329 (46%), Gaps = 47/329 (14%)
Query: 14 VFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNG 73
V KM E + S+ A GLV A ++M +T N++ W+A+I G+ +NG
Sbjct: 281 VIKMGLEDEPALLISLTAFYAKCGLVTVAKSFFDQM-----KTTNVIMWNAMISGYAKNG 335
Query: 74 YDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVN 133
+ EEA+ + M + ++P++ T+ S + A A++ L L + Y++++ + S+ FV
Sbjct: 336 HAEEAVNLFHYMISRNIKPDSVTVRSAVLASAQVGSLELAQWMDDYVSKSNYGSDIFVNT 395
Query: 134 GLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQR 193
L+D+Y +CG + A ++F + S K+ V + +I+GY +G EA L+ M+ GV
Sbjct: 396 SLIDMYAKCGSVEFARRVFDRNSDKDVVMWSAMIMGYGLHGQGWEAINLYHVMKQAGVFP 455
Query: 194 GIISWNSMISGYVDNSLYDEAFSMFR------------------DLLMRDG--------- 226
+++ +++ + L E + +F DLL R G
Sbjct: 456 NDVTFIGLLTACNHSGLVKEGWELFHCMKDFEIVPRNEHYSCVVDLLGRAGYLGEACAFI 515
Query: 227 ----IEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDL 282
IEP +G++L AC + G+ +L D + G V++ +L
Sbjct: 516 MKIPIEPGVSVWGALLSACKIYRCVTLGEYAANKLFSL----DPYNTGHYVQL----SNL 567
Query: 283 VAAQMAFDEIENIENLLGKMKEDGFEPNV 311
A+ +D + ++ L M+E G ++
Sbjct: 568 YASSCLWDCVAHVRVL---MREKGLNKDL 593
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 120/284 (42%), Gaps = 29/284 (10%)
Query: 248 RKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGF 307
R +IH + GLQ + F+ LV + A+ FDE
Sbjct: 70 RHLDQIHNRLVISGLQHNGFLMTKLVNGSSNLGQICYARKLFDEF--------------C 115
Query: 308 EPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ 353
P+V+ WNA+ +++ M + PD +T +L AC+ L
Sbjct: 116 YPDVFMWNAIIRSYSRNNMYRDTVEMYRWMRWTGVHPDGFTFPYVLKACTELLDFGLSCI 175
Query: 354 VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGH 413
+H I+ G+ SDV + LV +YAKCG + A++ + + +VS ++++ YA +G
Sbjct: 176 IHGQIIKYGFGSDVFVQNGLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGK 235
Query: 414 GKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTC 473
E + F ++ +G +PD I+ +S L A ++ G + ++
Sbjct: 236 AVEALRMFSQMRNNGVKPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLIS 295
Query: 474 MVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
+ ++ G + A F ++ + +MW A++ G +G+ E
Sbjct: 296 LTAFYAKCGLVTVAKSFFDQMK-TTNVIMWNAMISGYAKNGHAE 338
>gi|224116778|ref|XP_002331875.1| predicted protein [Populus trichocarpa]
gi|222875393|gb|EEF12524.1| predicted protein [Populus trichocarpa]
Length = 675
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 184/556 (33%), Positives = 299/556 (53%), Gaps = 32/556 (5%)
Query: 56 TPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKE 115
+PNL ++ +I G+T+N +A+ + RM + + +S++ C L +
Sbjct: 40 SPNLHLYTKMIAGYTRNDRLCDALKLFDRMSVR----DVVSWNSMIKGCLDCGNLGMATR 95
Query: 116 FHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGN 175
+ +S +VNG Y + G + A ++F +K+ + N ++ GY ENG
Sbjct: 96 LFDEMPEKNVISWTTMVNG----YLKFGRVELAQRLFLDMHVKDVAAWNAMVHGYFENGR 151
Query: 176 VAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFG 235
V E LF++M R +ISW SMI G N +EA +F+ +L R G+EPT TF
Sbjct: 152 VEEGVRLFEEMP----VRDVISWTSMIGGLDLNGKSEEALFVFKKML-RSGVEPTWSTFA 206
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI--E 293
VL ACA+ G ++H + LG F+ +L+ Y + A F+E +
Sbjct: 207 CVLSACANAVEFNLGVQVHGHVVKLGCFFHEFISVSLITFYANCMKIEHAHKIFNETLTK 266
Query: 294 NIENLLGKMKEDGFEPNVYTWN-----AMQLFSEMLSLDLTPDIYTVGIILSACSSLATM 348
N+ + Y WN A+++F +M + P+ T I L AC L +
Sbjct: 267 NVVKWTALL-------TAYVWNNKHQDALRVFGDMTKMGALPNQSTFSITLKACCGLEAL 319
Query: 349 ERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAY 408
++GK++H AI+ G ++DV +G +LV MY +CG++ A ++ I+ D+VS N+++
Sbjct: 320 DKGKEIHTMAIKLGLETDVFVGNSLVVMYTECGNVNSAVAVFRNINEKDIVSWNSIIVGS 379
Query: 409 AMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYD---VK 465
A HG G + F +++ G P+ I+F LSAC +G + G FF+ ++ Y ++
Sbjct: 380 AQHGFGLWALIFFNQMIRRGVDPNEITFTGLLSACSRSGMLLKGRCFFEYISRYKSNVLR 439
Query: 466 PSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADR 525
P +HY CMVD+L R G+L EA E ++ +P+ +S++W ALL C H NLE + AA
Sbjct: 440 P--QHYACMVDILGRCGKLDEAEELVRYMPVKANSMIWLALLSACRVHSNLEVAERAAKH 497
Query: 526 LIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRA 585
+++LEPN + YV+L+N++A AGRW+D++R R KMK + K PG SW+ R + H+F +
Sbjct: 498 ILDLEPNCSSAYVLLSNIYASAGRWADVSRMRVKMKQGGLVKQPGSSWVVLRGKKHEFLS 557
Query: 586 SDRSHDRSEEIYTIID 601
+DRSH SE IY +D
Sbjct: 558 ADRSHPLSERIYEKLD 573
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 116/459 (25%), Positives = 175/459 (38%), Gaps = 126/459 (27%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSS---------- 51
Y + L DA K+F M RD VSWNS++ C G + A + M
Sbjct: 53 YTRNDRLCDALKLFDRMSVRDVVSWNSMIKGCLDCGNLGMATRLFDEMPEKNVISWTTMV 112
Query: 52 ----------------LDNETPNLVSWSA------------------------------- 64
LD ++ +W+A
Sbjct: 113 NGYLKFGRVELAQRLFLDMHVKDVAAWNAMVHGYFENGRVEEGVRLFEEMPVRDVISWTS 172
Query: 65 VIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNG 124
+IGG NG EEA+ + +M G+EP T + VL ACA + +LG + HG++ + G
Sbjct: 173 MIGGLDLNGKSEEALFVFKKMLRSGVEPTWSTFACVLSACANAVEFNLGVQVHGHVVKLG 232
Query: 125 FMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFD 184
+ F+ L+ Y C + A KIF++ KN V ++ Y N +A +F
Sbjct: 233 CFFHEFISVSLITFYANCMKIEHAHKIFNETLTKNVVKWTALLTAYVWNNKHQDALRVFG 292
Query: 185 QMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADM 244
M +G P TF L AC +
Sbjct: 293 DMTKMGAL------------------------------------PNQSTFSITLKACCGL 316
Query: 245 NSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKE 304
+L KGKEIH +AI LGL++D FVG +LV MY ++ +A F I
Sbjct: 317 EALDKGKEIHTMAIKLGLETDVFVGNSLVVMYTECGNVNSAVAVFRNIN----------- 365
Query: 305 DGFEPNVYTWN--------------AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMER 350
E ++ +WN A+ F++M+ + P+ T +LSACS + +
Sbjct: 366 ---EKDIVSWNSIIVGSAQHGFGLWALIFFNQMIRRGVDPNEITFTGLLSACSRSGMLLK 422
Query: 351 GKQVHAYAIRCGYDSDV---HIGTALVDMYAKCGSLKHA 386
G+ Y R Y S+V +VD+ +CG L A
Sbjct: 423 GRCFFEYISR--YKSNVLRPQHYACMVDILGRCGKLDEA 459
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 91/385 (23%), Positives = 162/385 (42%), Gaps = 18/385 (4%)
Query: 151 IFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSL 210
IF K N +I GY N + +A +LFD+M R ++SWNSMI G +D
Sbjct: 34 IFDKIPSPNLHLYTKMIAGYTRNDRLCDALKLFDRMS----VRDVVSWNSMIKGCLDCGN 89
Query: 211 YDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQ-SDTFVG 269
A +F ++ ++ I T+ G L+ G+ A + L + D
Sbjct: 90 LGMATRLFDEMPEKNVISWTTMVNG----------YLKFGRVELAQRLFLDMHVKDVAAW 139
Query: 270 GALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLT 329
A+V Y + F+E+ + + G + N + A+ +F +ML +
Sbjct: 140 NAMVHGYFENGRVEEGVRLFEEMPVRDVISWTSMIGGLDLNGKSEEALFVFKKMLRSGVE 199
Query: 330 PDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLA 389
P T +LSAC++ G QVH + ++ G I +L+ YA C ++HA
Sbjct: 200 PTWSTFACVLSACANAVEFNLGVQVHGHVVKLGCFFHEFISVSLITFYANCMKIEHAHKI 259
Query: 390 YKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSI 449
+ T ++V A+LTAY + ++ + F + G P+ +F L AC ++
Sbjct: 260 FNETLTKNVVKWTALLTAYVWNNKHQDALRVFGDMTKMGALPNQSTFSITLKACCGLEAL 319
Query: 450 KTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
G E + ++ + +V + + G + A + I D V W +++ G
Sbjct: 320 DKGKEIHTMAIKLGLETDVFVGNSLVVMYTECGNVNSAVAVFRNIN-EKDIVSWNSIIVG 378
Query: 510 CVSHGNLEFGQIAADRLIE--LEPN 532
HG + I +++I ++PN
Sbjct: 379 SAQHGFGLWALIFFNQMIRRGVDPN 403
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 71/161 (44%), Gaps = 41/161 (25%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +CG+++ A VF+ + E+D VSWNS++ A +G L
Sbjct: 347 MYTECGNVNSAVAVFRNINEKDIVSWNSIIVGSAQHGFGL-------------------- 386
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
W+ + F Q M G++PN T + +L AC+R L G+ F YI
Sbjct: 387 -WALIF--FNQ-------------MIRRGVDPNEITFTGLLSACSRSGMLLKGRCFFEYI 430
Query: 121 TRNGFMSN---PFVVNGLVDVYRRCGDMLSALKIFSKFSIK 158
+R + SN P +VD+ RCG + A ++ +K
Sbjct: 431 SR--YKSNVLRPQHYACMVDILGRCGKLDEAEELVRYMPVK 469
>gi|414884271|tpg|DAA60285.1| TPA: hypothetical protein ZEAMMB73_421255 [Zea mays]
Length = 686
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 189/572 (33%), Positives = 299/572 (52%), Gaps = 31/572 (5%)
Query: 46 LERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRM-QAEGLEPNARTLSSVLPAC 104
L SSL + + ++ +I +G A+ +M + + P+A T VL AC
Sbjct: 110 LPTASSLAAGSTSPEPYNVLISACLNHGLPRHALAAYQKMVDKDAVPPDAFTYPKVLRAC 169
Query: 105 ARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCN 164
A L LG+ H G + F N LV +Y +CGD+ +A ++F ++ VS N
Sbjct: 170 AETADLVLGRAVHVRAAAAGMDGHLFFQNALVSMYAKCGDLAAARRVFDGMDNRDVVSWN 229
Query: 165 TIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMR 224
++I GY +G EA ELF QM+ G + ++WN++ GY+ Y A + RD++ R
Sbjct: 230 SMISGYAASGQWREAVELFRQMQAEGAEANSVTWNTIAGGYIQMRDYRAALGLIRDMV-R 288
Query: 225 DGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVA 284
G E T AC+ LR GKEIH LA+ + V A++ MY R D+
Sbjct: 289 GGAEVDFVTLVIGSNACSRAGWLRLGKEIHGLAVRMQCHEIDSVVNAVITMYARCNDMER 348
Query: 285 AQMAFDEIENIENLLGKMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTP 330
A M F + P + WN M +LF EM+ D+ P
Sbjct: 349 ALMLFRTMRC--------------PGLVAWNTMLAGFALLDDAEAASRLFREMVCSDVQP 394
Query: 331 DIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAY 390
+ TV L+ C+ +A ++ G+++HA+ IR G+ + +L+DMY+K G L A+ +
Sbjct: 395 NYVTVVTYLALCARVANLQHGQELHAHIIRQGFKRYCLLWNSLIDMYSKSGRLSVAQNVF 454
Query: 391 KRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIK 450
+ D++S +M+ Y M G G + F++++ SG PD I ++ LSAC H+G +
Sbjct: 455 DTMDDRDMISFTSMIAGYGMQGKGIVSLRFFKQMIDSGIMPDAIIMVTVLSACSHSGLVD 514
Query: 451 TGSEFFDLM-AYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
G E FD M + Y +KP ++HY+CMVDL +RAG L +A E + + P P S M AL+G
Sbjct: 515 EGEELFDKMVSSYGIKPQMEHYSCMVDLYARAGLLEKAEELLNQTPFPPTSTMVAALVGA 574
Query: 510 CVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSP 569
C GN+ G+ +A RL+E++ N G+YV++AN++A AG W++LA R+ M+D + K+P
Sbjct: 575 CHEQGNVIIGERSARRLLEMKTENAGHYVLIANMYAAAGCWNELATVRKLMRDMGVMKAP 634
Query: 570 GCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
G +W + + F DRS+ + EIY ++D
Sbjct: 635 GLAWADLGNGFTPFLVGDRSNPLAPEIYEVLD 666
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 123/432 (28%), Positives = 194/432 (44%), Gaps = 49/432 (11%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG L A++VF M RD VSWNS+++ AA+G EA+E +M + E N V
Sbjct: 203 MYAKCGDLAAARRVFDGMDNRDVVSWNSMISGYAASGQWREAVELFRQMQAEGAEA-NSV 261
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+ + GG+ Q A+G++ M G E + TL AC+R L LGKE HG
Sbjct: 262 TWNTIAGGYIQMRDYRAALGLIRDMVRGGAEVDFVTLVIGSNACSRAGWLRLGKEIHGLA 321
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R VVN ++ +Y RC DM AL +F V+ NT++ G+
Sbjct: 322 VRMQCHEIDSVVNAVITMYARCNDMERALMLFRTMRCPGLVAWNTMLAGFA--------- 372
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
L D E A +FR+++ D ++P T + L
Sbjct: 373 -LLDDAE-------------------------AASRLFREMVCSD-VQPNYVTVVTYLAL 405
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA + +L+ G+E+HA I G + + +L++MY + L AQ FD +++ + +
Sbjct: 406 CARVANLQHGQELHAHIIRQGFKRYCLLWNSLIDMYSKSGRLSVAQNVFDTMDDRDMISF 465
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG-----KQVH 355
G+ +++ F +M+ + PD + +LSACS ++ G K V
Sbjct: 466 TSMIAGYGMQGKGIVSLRFFKQMIDSGIMPDAIIMVTVLSACSHSGLVDEGEELFDKMVS 525
Query: 356 AYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGK 415
+Y I+ + + +VD+YA+ G L+ A + P + A L A H G
Sbjct: 526 SYGIK----PQMEHYSCMVDLYARAGLLEKAEELLNQTPFPPTSTMVAALVG-ACHEQGN 580
Query: 416 EGIAH--FRRIL 425
I RR+L
Sbjct: 581 VIIGERSARRLL 592
>gi|296089484|emb|CBI39303.3| unnamed protein product [Vitis vinifera]
Length = 723
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 203/610 (33%), Positives = 298/610 (48%), Gaps = 82/610 (13%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG +D A+ VF+ E D VS
Sbjct: 85 MYCKCGRIDWARLVFESADELDSVS----------------------------------- 109
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACAR--LQKLSLGKEFHG 118
W+++I G+ + G ++E + +L +M GL N+ L S L AC + GK HG
Sbjct: 110 -WNSLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHG 168
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
+ G + V L+D Y + GD+ A KIF N V N +I G
Sbjct: 169 CAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAG--------- 219
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
F QME + + +EA +F ++ R G++P+ FTF S+L
Sbjct: 220 ----FLQMETMA-----------------DEFANEAMYLFFEMQSR-GMKPSEFTFSSIL 257
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAF------DEI 292
AC+ + + GK+IHA LQSD F+G ALVE+Y + F D +
Sbjct: 258 KACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVV 317
Query: 293 ENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGK 352
++G ++ FE + LF E+L PD +T+ I+LSAC++LA ++ G+
Sbjct: 318 SWTSLIVGHVQNGQFE------GGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGE 371
Query: 353 QVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHG 412
Q+HAYAI+ G + I + + MYAKCG + A + +K PD+VS + M+++ A HG
Sbjct: 372 QIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHG 431
Query: 413 HGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHY 471
KE + F + SG P+HI+FL L AC H G ++ G +F++M + + P++KH
Sbjct: 432 CAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHS 491
Query: 472 TCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEP 531
C+VDLL RAG L EA FI D VMW +LL C H + G+ A+R+IELEP
Sbjct: 492 ACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVHKATDTGKRVAERVIELEP 551
Query: 532 NNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHD 591
+YV+L N++ AG R MKDR + K PG SWIE + +H F A DRSH
Sbjct: 552 EAAASYVLLYNIYNDAGIQMPATEIRNLMKDRGVKKEPGLSWIEVGNVVHSFVAGDRSHP 611
Query: 592 RSEEIYTIID 601
S+ IY ++
Sbjct: 612 NSQVIYVQLE 621
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 128/468 (27%), Positives = 211/468 (45%), Gaps = 52/468 (11%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
N+VSW+++I G+TQ G+ E + + + L + T S+ L C R L LG+ H
Sbjct: 5 NVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLGRLIH 64
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
IT +G + N L+D+Y +CG + A +F + VS N++I GY G+
Sbjct: 65 ALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIGSND 124
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
E L +M +R G+ S+ GS
Sbjct: 125 EMLRLLVKM------------------------------------LRHGLNLNSYALGSA 148
Query: 238 LIACAD--MNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
L AC +S+ GK +H A+ LGL D VG AL++ Y + DL A F + +
Sbjct: 149 LKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDP 208
Query: 296 ENLLGKMKEDGF-----EPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMER 350
++ GF + + AM LF EM S + P +T IL ACS++ E
Sbjct: 209 NVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFEC 268
Query: 351 GKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAM 410
GKQ+HA + SD IG ALV++Y+ GS++ + D+VS +++ +
Sbjct: 269 GKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQ 328
Query: 411 HGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKH 470
+G + G+ F +L SG +PD + LSAC + ++K+G + + Y +K + +
Sbjct: 329 NGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQ----IHAYAIKTGIGN 384
Query: 471 YTCM----VDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
+T + + + ++ G++ A K+ PD V W ++ HG
Sbjct: 385 FTIIQNSQICMYAKCGDIDSANMTFKETK-NPDIVSWSVMISSNAQHG 431
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/335 (28%), Positives = 163/335 (48%), Gaps = 9/335 (2%)
Query: 192 QRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGK 251
+R ++SWNS+ISGY Y E ++F++ M D + FTF + L C LR G+
Sbjct: 3 KRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSD-LRLDKFTFSNALSVCGRTLDLRLGR 61
Query: 252 EIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNV 311
IHAL GL + +L++MYC+ + A++ F+ + ++++ G+
Sbjct: 62 LIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIG 121
Query: 312 YTWNAMQLFSEMLSLDLTPDIYTVGIILSACSS--LATMERGKQVHAYAIRCGYDSDVHI 369
++L +ML L + Y +G L AC S +++E GK +H A++ G D DV +
Sbjct: 122 SNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVV 181
Query: 370 GTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAM-----HGHGKEGIAHFRRI 424
GTAL+D YAK G L+ A +K + P++V NAM+ + E + F +
Sbjct: 182 GTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEM 241
Query: 425 LASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGEL 484
+ G +P +F S L AC + + G + + Y+++ +V+L S +G +
Sbjct: 242 QSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSI 301
Query: 485 GEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFG 519
+ + P D V W +L+ G V +G E G
Sbjct: 302 EDGLKCFHSTPKL-DVVSWTSLIVGHVQNGQFEGG 335
>gi|147855060|emb|CAN82371.1| hypothetical protein VITISV_027622 [Vitis vinifera]
Length = 697
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 193/582 (33%), Positives = 312/582 (53%), Gaps = 55/582 (9%)
Query: 27 NSVVTACAANGLVLEALECLERMSSLDNETP--NLVSWSAVIGGFTQNGYDEEAIGMLFR 84
NS++ A GL+ +A + + TP N+VSW+ +I G +N EAI +
Sbjct: 60 NSLMNAYVYCGLLADAKQIF-------HHTPCKNVVSWTILISGLAKNDCFVEAIDVFRE 112
Query: 85 MQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGD 144
M +PNA T+SSVLPA A L + + K H + R GF N FV LVD+Y
Sbjct: 113 MTMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVETALVDMY----- 167
Query: 145 MLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISG 204
SKF G + AR+LF+ M +R ++SWN+++SG
Sbjct: 168 --------SKF------------------GCMGVARQLFESMS----ERNVVSWNAIVSG 197
Query: 205 YVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQS 264
Y D+ +EA +F +L+ R G+ +T S++ A + L+ G IH I G ++
Sbjct: 198 YSDHGFSEEAIDLF-NLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYEN 256
Query: 265 DTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEML 324
D + AL+++Y + + A F E+ + + GF + A++ F++ML
Sbjct: 257 DKHIKTALMDIYVSHNCVDDAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKML 316
Query: 325 SL-DLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSL 383
+ +L D + ILS+CS +++G++VHA AI+ + +++ +G+A++DMYA CG+L
Sbjct: 317 GIQNLKLDSIVLMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNL 376
Query: 384 KHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSAC 443
+ A+ + + D+V NAM+ M+G+G + I F ++ SG PD +F+S L AC
Sbjct: 377 EDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYAC 436
Query: 444 VHAGSIKTGSEFFDLMAYYDVK-----PSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAP 498
HAG + G + F Y+ VK P+L+HY C++D+L RAG+L AY FI +P P
Sbjct: 437 SHAGMVYEGLQIF----YHMVKTSHDIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQP 492
Query: 499 DSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQ 558
D ++ LLG C HGN++ G + ++ E+EPN+ G YV+L+N++A AG W + TR
Sbjct: 493 DFDVYSTLLGACRIHGNIKLGHEISQKIFEMEPNDAGYYVLLSNMYALAGNWEGVKMTRA 552
Query: 559 KMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTII 600
++ +R+ K PG S IE EI+ F A ++ H + +I I+
Sbjct: 553 SLRSKRLKKDPGFSSIEINQEIYTFMAGEKDHPQYFKIEGIL 594
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 109/445 (24%), Positives = 197/445 (44%), Gaps = 44/445 (9%)
Query: 87 AEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDML 146
+ L P A++ +S+L +L+ L ++ H I +G N F+ N L++ Y CG +
Sbjct: 17 TQRLCPLAQSHASIL---RKLKDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLA 73
Query: 147 SALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYV 206
A +IF KN VS +I G +N EA ++F +M
Sbjct: 74 DAKQIFHHTPCKNVVSWTILISGLAKNDCFVEAIDVFREMT------------------- 114
Query: 207 DNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDT 266
+P + T SVL A A++ +R K +H + G + +
Sbjct: 115 -----------------MGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNV 157
Query: 267 FVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSL 326
FV ALV+MY ++ + A+ F+ + + G+ + ++ A+ LF+ M
Sbjct: 158 FVETALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSDHGFSEEAIDLFNLMRRK 217
Query: 327 DLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHA 386
L D YT+ ++ A S+ ++ G +H + IR GY++D HI TAL+D+Y + A
Sbjct: 218 GLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDA 277
Query: 387 RLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILA-SGFRPDHISFLSALSACVH 445
+ + D+ + MLT ++ H I HF ++L + D I + LS+C H
Sbjct: 278 HRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIVLMGILSSCSH 337
Query: 446 AGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGA 505
+G+++ G L ++ + ++D+ + G L +A F + D V W A
Sbjct: 338 SGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMG-EKDVVCWNA 396
Query: 506 LLGGCVSHGNLEFGQIAADRLIELE 530
++ G +G +G A D ++++
Sbjct: 397 MIAGNGMNG---YGTDAIDLFLQMK 418
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 99/422 (23%), Positives = 182/422 (43%), Gaps = 79/422 (18%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G + A+++F+ M ER+ VSWN++V+
Sbjct: 166 MYSKFGCMGVARQLFESMSERNVVSWNAIVS----------------------------- 196
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
G++ +G+ EEAI + M+ +GL + T+ S++PA + L +G HG+I
Sbjct: 197 -------GYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFI 249
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R G+ ++ + L+D+Y + A ++FS+ +K+
Sbjct: 250 IRTGYENDKHIKTALMDIYVSHNCVDDAHRVFSEMFVKD--------------------- 288
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+ +W M++G+ +D A F +L ++ S +L +
Sbjct: 289 --------------VAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIVLMGILSS 334
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C+ +L++G+ +HALAI ++ FVG A+++MY +L A+ F + + +
Sbjct: 335 CSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCW 394
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G N Y +A+ LF +M L PD T +L ACS + G Q+ + ++
Sbjct: 395 NAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVK 454
Query: 361 CGYD-SDVHIGTALVDMYAKCGSLKHARLAYKRIST----PDLVSQNAMLTAYAMHGHGK 415
+D ++ ++D+ + G L AY I+ PD + +L A +HG+ K
Sbjct: 455 TSHDIPNLQHYACVIDILGRAGQLD---AAYSFINNMPFQPDFDVYSTLLGACRIHGNIK 511
Query: 416 EG 417
G
Sbjct: 512 LG 513
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 80/184 (43%), Gaps = 38/184 (20%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY CG+L+DAK+ F M E+D V WN+++ A NG+
Sbjct: 369 MYANCGNLEDAKRFFYGMGEKDVVCWNAMI---AGNGM---------------------- 403
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKE-FHGY 119
NGY +AI + +M+ GL+P+ T SVL AC+ + G + F+
Sbjct: 404 -----------NGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHM 452
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCE-NGNVAE 178
+ + + N ++D+ R G + +A + + + + ++G C +GN+
Sbjct: 453 VKTSHDIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKL 512
Query: 179 AREL 182
E+
Sbjct: 513 GHEI 516
>gi|225450537|ref|XP_002277327.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570 [Vitis vinifera]
Length = 607
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 187/586 (31%), Positives = 303/586 (51%), Gaps = 44/586 (7%)
Query: 18 MPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEE 77
+P+ V +++ + GL+ EA + M D +V+W+ +I G+T
Sbjct: 38 IPKGPSVLATTLIKSYFGKGLIGEARTLFDEMPERD-----VVAWTVMIAGYTSCNNHTH 92
Query: 78 AIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVD 137
A + M E L+PNA T+SSVL AC ++ LS G+ HG ++G +V N L+D
Sbjct: 93 AWMVFCEMMNEELDPNAFTISSVLKACKGMKCLSYGRLVHGLAIKHGLDGFIYVDNALMD 152
Query: 138 VYRRCG-DMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGII 196
+Y C M A +F +KNEVS
Sbjct: 153 MYATCCVSMDDACMVFRGIHLKNEVS---------------------------------- 178
Query: 197 SWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHAL 256
W ++I+GY +FR +L+ + +E F+F + AC + S G+++HA
Sbjct: 179 -WTTLIAGYTHRDDGYGGLRVFRQMLLEE-VELNPFSFSIAVRACTSIGSHTFGEQLHAA 236
Query: 257 AIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNA 316
G +S+ V ++++MYCR A F E+ + + G+E + T +
Sbjct: 237 VTKHGFESNLPVMNSILDMYCRCSCFSEANRYFYEMNQRDLITWNTLIAGYERSNPT-ES 295
Query: 317 MQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDM 376
+ +FS M S +P+ +T I++AC++LA + G+Q+H IR G D ++ + AL+DM
Sbjct: 296 LYVFSMMESEGFSPNCFTFTSIMAACATLAFLNCGQQIHGRIIRRGLDGNLALSNALIDM 355
Query: 377 YAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISF 436
Y+KCG++ + + +S DLVS AM+ Y HG+G+E + F +++ SG RPD + F
Sbjct: 356 YSKCGNIADSHQVFGGMSRRDLVSWTAMMIGYGTHGYGEEAVELFDKMVRSGIRPDRVVF 415
Query: 437 LSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIP 495
++ LSAC HAG + G +F LM Y++ P + Y C+VDLL RAG++ EAYE I+ +P
Sbjct: 416 MAILSACSHAGLVDEGLRYFKLMVGDYNISPDQEIYGCVVDLLGRAGKVEEAYELIESMP 475
Query: 496 MAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLAR 555
PD +WG LG C +H G++AA R+++L P+ G YVML+N++A G+W + AR
Sbjct: 476 FKPDECVWGPFLGACKAHTFPNLGKLAAHRILDLRPHMAGTYVMLSNIYAADGKWGEFAR 535
Query: 556 TRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
R+ MK K G SW+E + ++ F D + E IY +++
Sbjct: 536 LRKLMKRMGNKKETGRSWVEVGNHVYSFVVGDEVGSKIEGIYQVLE 581
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 112/238 (47%), Gaps = 37/238 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +C +A + F M +RD ++WN+++ ER N T +L
Sbjct: 255 MYCRCSCFSEANRYFYEMNQRDLITWNTLIAG-------------YER----SNPTESLY 297
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+S M++EG PN T +S++ ACA L L+ G++ HG I
Sbjct: 298 VFSM--------------------MESEGFSPNCFTFTSIMAACATLAFLNCGQQIHGRI 337
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R G N + N L+D+Y +CG++ + ++F S ++ VS +++GY +G EA
Sbjct: 338 IRRGLDGNLALSNALIDMYSKCGNIADSHQVFGGMSRRDLVSWTAMMIGYGTHGYGEEAV 397
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
ELFD+M G++ + + +++S L DE F+ ++ I P +G V+
Sbjct: 398 ELFDKMVRSGIRPDRVVFMAILSACSHAGLVDEGLRYFKLMVGDYNISPDQEIYGCVV 455
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 66/316 (20%), Positives = 114/316 (36%), Gaps = 79/316 (25%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG++ D+ +VF M RD VSW +++ +G
Sbjct: 355 MYSKCGNIADSHQVFGGMSRRDLVSWTAMMIGYGTHG----------------------- 391
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
Y EEA+ + +M G+ P+ ++L AC+ + G + +
Sbjct: 392 -------------YGEEAVELFDKMVRSGIRPDRVVFMAILSACSHAGLVDEGLRYFKLM 438
Query: 121 TRNGFMSNPFVVNG-LVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ +S + G +VD+ R G + A ++ K + +G C+
Sbjct: 439 VGDYNISPDQEIYGCVVDLLGRAGKVEEAYELIESMPFKPDECVWGPFLGACK------- 491
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
F + L R I+ ++G + M ++ DG
Sbjct: 492 AHTFPNLGKLAAHR-ILDLRPHMAG---------TYVMLSNIYAADG------------- 528
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI---- 295
+ LRK L +G + +T G + VE+ V +IE I
Sbjct: 529 KWGEFARLRK------LMKRMGNKKET--GRSWVEVGNHVYSFVVGDEVGSKIEGIYQVL 580
Query: 296 ENLLGKMKEDGFEPNV 311
ENL+G MKE G+ P++
Sbjct: 581 ENLIGHMKESGYVPDL 596
>gi|226492710|ref|NP_001145953.1| uncharacterized protein LOC100279479 [Zea mays]
gi|219885099|gb|ACL52924.1| unknown [Zea mays]
Length = 530
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 166/430 (38%), Positives = 245/430 (56%), Gaps = 5/430 (1%)
Query: 170 YCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEP 229
YC+ G V++AR +FD+M R ++SW +I+GY N + EA + D+L R P
Sbjct: 2 YCKCGAVSDARHVFDKMP----SRDVVSWTYLIAGYAQNYMPAEAIGLLPDML-RARFRP 56
Query: 230 TSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAF 289
FTF S+L A G+++HALA+ D +VG AL++MY R + + A M F
Sbjct: 57 NGFTFTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVF 116
Query: 290 DEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATME 349
D + + + GF + F+EM +T + SA + + +E
Sbjct: 117 DRLVSKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALE 176
Query: 350 RGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYA 409
+G+ VHA+ I+ G +G ++ MYAK GS+ AR + R+ DLV+ N MLTA A
Sbjct: 177 QGRWVHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALA 236
Query: 410 MHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLK 469
+G GKE +AHF I G + + I+FLS L+AC H G +K G +FD+M Y+V+P +
Sbjct: 237 QYGLGKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMMKDYNVQPEID 296
Query: 470 HYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIEL 529
HY VDLL RAG L EA F+ K+PM P + +WGALLG C H N + GQ AAD + EL
Sbjct: 297 HYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAKMGQYAADHVFEL 356
Query: 530 EPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRS 589
+P++TG V+L N++A G+W+D AR R+ MK + K P CSW++ + +H F A D +
Sbjct: 357 DPDDTGPPVLLYNIYASTGKWNDAARVRKMMKATGVKKEPACSWVQIENSVHMFVADDDT 416
Query: 590 HDRSEEIYTI 599
H +S +IY +
Sbjct: 417 HPKSGDIYRM 426
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 107/425 (25%), Positives = 173/425 (40%), Gaps = 87/425 (20%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG++ DA+ VF MP RD +V
Sbjct: 1 MYCKCGAVSDARHVFDKMPSRD------------------------------------VV 24
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ +I G+ QN EAIG+L M PN T +S+L A S+G++ H
Sbjct: 25 SWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGACGGCSIGEQMHALA 84
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ + + +V + L+D+Y RC M A+ +F + KNEVS N +I G+ +
Sbjct: 85 VKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIAGFARKADGETTL 144
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
F +M+ R+G T FT+ S+ A
Sbjct: 145 MKFAEMQ------------------------------------RNGFGATHFTYSSMFSA 168
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE---- 296
A + +L +G+ +HA I G + FVG ++ MY + +V A+ FD ++ +
Sbjct: 169 FARIGALEQGRWVHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTW 228
Query: 297 -NLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVH 355
+L + + G A+ F E+ + + T +L+ACS ++ GK H
Sbjct: 229 NTMLTALAQYGLGK-----EAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGK--H 281
Query: 356 AYAIRCGYDSDVHIG--TALVDMYAKCGSLKHARL-AYKRISTPDLVSQNAMLTAYAMHG 412
+ + Y+ I + VD+ + G LK A + +K P A+L A MH
Sbjct: 282 YFDMMKDYNVQPEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHK 341
Query: 413 HGKEG 417
+ K G
Sbjct: 342 NAKMG 346
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 102/227 (44%), Gaps = 31/227 (13%)
Query: 56 TPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKE 115
+ N VSW+A+I GF + E + MQ G T SS+ A AR+ L G+
Sbjct: 121 SKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRW 180
Query: 116 FHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGN 175
H ++ ++G FV N ++ +Y + G M+ A K+F + ++ V+ NT++ + G
Sbjct: 181 VHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGL 240
Query: 176 VAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEA---FSM--------------- 217
EA F+++ G+Q I++ S+++ L E F M
Sbjct: 241 GKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMMKDYNVQPEIDHYVS 300
Query: 218 FRDLLMRDGI-------------EPTSFTFGSVLIACADMNSLRKGK 251
F DLL R G+ EPT+ +G++L AC + + G+
Sbjct: 301 FVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAKMGQ 347
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 85/191 (44%), Gaps = 9/191 (4%)
Query: 376 MYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHIS 435
MY KCG++ AR + ++ + D+VS ++ YA + E I +L + FRP+ +
Sbjct: 1 MYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFT 60
Query: 436 FLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIP 495
F S L A G G + L Y+ + + ++D+ +R ++ A ++
Sbjct: 61 FTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRL- 119
Query: 496 MAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLAR 555
++ + V W AL+ G + G+ + E++ N G A F Y+ +S AR
Sbjct: 120 VSKNEVSWNALIAGFARKAD---GETTLMKFAEMQRNGFG-----ATHFTYSSMFSAFAR 171
Query: 556 TRQKMKDRRMH 566
+ R +H
Sbjct: 172 IGALEQGRWVH 182
>gi|255559709|ref|XP_002520874.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540005|gb|EEF41583.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 833
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 212/733 (28%), Positives = 338/733 (46%), Gaps = 155/733 (21%)
Query: 1 MYGKCGSLDDAKKVFKMMPER-----DCVSWNSVVTACAANGLVLEALECLERMSS---- 51
+Y KCG+ DA KVF +P+ D WNS++ G + E + RM S
Sbjct: 97 IYVKCGTFTDAVKVFDQLPKSGVSVDDVTIWNSIIDGYFRFGQLEEGMVQFGRMQSSGYK 156
Query: 52 ------------LDNETP------------------------------NLVSWSAVIGGF 69
+ N P N+V+W+ +IGGF
Sbjct: 157 EGKQIHSYIVRNMLNFDPFLETALIDTYFKCGRPTEARYLFKKLKDRSNIVAWNVMIGGF 216
Query: 70 TQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNP 129
+NG E ++ + E ++ + + + L AC + + +S GK+ H + GF +P
Sbjct: 217 GENGLWENSLEYYLLAKTENVKVVSSSFTCTLSACGQGEFVSFGKQVHCDAIKVGFEDDP 276
Query: 130 FV-------------------------------VNGLVDVYRRCGDMLSALKIFSK---- 154
+V N L+ Y G AL+I+ +
Sbjct: 277 YVHTSLLTMYGKCQMIESAEKVFNEVPDKEIELWNALISAYVGNGYAYDALRIYKQMKLC 336
Query: 155 ------FSIKNEVSCNT-----------------------------IIVGYCENGNVAEA 179
F+I N ++ ++ ++ Y + G+ A
Sbjct: 337 TVLSDSFTILNVLTSSSMAGLYDLGRLIHTEIVKRPLQSSITIQSALLTMYSKFGDSNYA 396
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
+F M+ +R +++W S+ISG+ N Y EA FR + D ++P S S++
Sbjct: 397 NSIFSTMK----ERDVVAWGSVISGFCQNRKYKEALDFFRAM-EADLVKPDSDIMASIIS 451
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
AC + + G IH I GLQ D FV +L++MY ++ F E
Sbjct: 452 ACTGLEKVDLGCTIHGFVIKSGLQLDVFVASSLLDMYSKF--------GFPERA------ 497
Query: 300 GKMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSSL 345
G + D N+ WN++ LFS++L DL PD + +L+A SS+
Sbjct: 498 GNIFSDMPLKNLVAWNSIISCYCRNNLPDLSINLFSQVLRNDLYPDSVSFTSVLAAISSV 557
Query: 346 ATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAML 405
A + +GK VH Y +R D+ + L+DMY KCG LK+A+ ++RIS +LV+ N+M+
Sbjct: 558 AALLKGKSVHGYLVRLWIPFDLQVENTLIDMYIKCGLLKYAQHIFERISEKNLVAWNSMI 617
Query: 406 TAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDV 464
Y HG + I F + +SG +PD ++FLS LS+C H+G I+ G F++M + +
Sbjct: 618 GGYGSHGECSKAIELFDEMRSSGIKPDDVTFLSLLSSCNHSGLIEEGLHLFEMMKMKFGI 677
Query: 465 KPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAAD 524
+P ++HY +VDL RAG LG+AY F+K +P+ PD +W +LL C H NLE G++ A+
Sbjct: 678 EPRMEHYVNIVDLYGRAGCLGDAYSFVKNMPVEPDRSIWLSLLCSCKIHLNLELGEMVAN 737
Query: 525 RLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFR 584
+L+ +EP+ NYV L NL+ A W A R MK++ + K+PGCSWIE R+++ F
Sbjct: 738 KLLNMEPSKGSNYVQLLNLYGEAELWDRTANLRASMKEKGLKKTPGCSWIEVRNKVDVFY 797
Query: 585 ASDRSHDRSEEIY 597
+ D S + EIY
Sbjct: 798 SGDCSSPITTEIY 810
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/418 (22%), Positives = 184/418 (44%), Gaps = 59/418 (14%)
Query: 96 TLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKF 155
T S+L ACA L L GK H I G S+ ++ + L+++Y +CG A+K+
Sbjct: 55 TYPSLLKACASLSNLQYGKTIHSSIITTGLHSDQYITSSLINIYVKCGTFTDAVKV---- 110
Query: 156 SIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIIS-WNSMISGYVDNSLYDEA 214
FDQ+ GV ++ WNS+I GY
Sbjct: 111 ---------------------------FDQLPKSGVSVDDVTIWNSIIDGY--------- 134
Query: 215 FSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVE 274
FR + +G+ FG + + ++GK+IH+ + L D F+ AL++
Sbjct: 135 ---FRFGQLEEGM----VQFGRM-----QSSGYKEGKQIHSYIVRNMLNFDPFLETALID 182
Query: 275 MYCRYQDLVAAQMAFDEIENIENLLG-KMKEDGFEPNVYTWNAMQ--LFSEMLSLDLTPD 331
Y + A+ F ++++ N++ + GF N N+++ L ++ ++ +
Sbjct: 183 TYFKCGRPTEARYLFKKLKDRSNIVAWNVMIGGFGENGLWENSLEYYLLAKTENVKVVSS 242
Query: 332 IYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYK 391
+T LSAC + GKQVH AI+ G++ D ++ T+L+ MY KC ++ A +
Sbjct: 243 SFTC--TLSACGQGEFVSFGKQVHCDAIKVGFEDDPYVHTSLLTMYGKCQMIESAEKVFN 300
Query: 392 RISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKT 451
+ ++ NA+++AY +G+ + + ++++ D + L+ L++ AG
Sbjct: 301 EVPDKEIELWNALISAYVGNGYAYDALRIYKQMKLCTVLSDSFTILNVLTSSSMAGLYDL 360
Query: 452 GSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
G + ++ S+ + ++ + S+ G+ A + D V WG+++ G
Sbjct: 361 GRLIHTEIVKRPLQSSITIQSALLTMYSKFGDSNYANSIFSTMK-ERDVVAWGSVISG 417
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 138/330 (41%), Gaps = 53/330 (16%)
Query: 202 ISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALG 261
I V Y EA ++ + + T FT+ S+L ACA +++L+ GK IH+ I G
Sbjct: 28 IKSLVQQRQYIEALKLYT----KSPVYTTRFTYPSLLKACASLSNLQYGKTIHSSIITTG 83
Query: 262 LQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFS 321
L SD ++ +L+ +Y + A FD++ K +V WN+
Sbjct: 84 LHSDQYITSSLINIYVKCGTFTDAVKVFDQLP---------KSGVSVDDVTIWNS----- 129
Query: 322 EMLSLDLTPDIYTVGIILSACSSLATME-----RGKQVHAYAIRCGYDSDVHIGTALVDM 376
+ + G + M+ GKQ+H+Y +R + D + TAL+D
Sbjct: 130 ------IIDGYFRFGQLEEGMVQFGRMQSSGYKEGKQIHSYIVRNMLNFDPFLETALIDT 183
Query: 377 YAKCGSLKHARLAYKRIS-TPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHIS 435
Y KCG AR +K++ ++V+ N M+ + +G + + ++ + S
Sbjct: 184 YFKCGRPTEARYLFKKLKDRSNIVAWNVMIGGFGENGLWENSLEYYLLAKTENVKVVSSS 243
Query: 436 FLSALSAC-----------VHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGEL 484
F LSAC VH +IK G ++ P + +T ++ + + +
Sbjct: 244 FTCTLSACGQGEFVSFGKQVHCDAIKVG---------FEDDPYV--HTSLLTMYGKCQMI 292
Query: 485 GEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
A + ++P + +W AL+ V +G
Sbjct: 293 ESAEKVFNEVP-DKEIELWNALISAYVGNG 321
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 94/207 (45%), Gaps = 29/207 (14%)
Query: 320 FSEMLSLDLTPDIYTVGI----ILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVD 375
+ E L L +YT +L AC+SL+ ++ GK +H+ I G SD +I ++L++
Sbjct: 37 YIEALKLYTKSPVYTTRFTYPSLLKACASLSNLQYGKTIHSSIITTGLHSDQYITSSLIN 96
Query: 376 MYAKCGSLKHA-----RLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFR 430
+Y KCG+ A +L +S D+ N+++ Y G +EG+ F R+ +SG++
Sbjct: 97 IYVKCGTFTDAVKVFDQLPKSGVSVDDVTIWNSIIDGYFRFGQLEEGMVQFGRMQSSGYK 156
Query: 431 PDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEF 490
+H+ ++ F P L+ T ++D + G EA
Sbjct: 157 E---------GKQIHSYIVRNMLNF---------DPFLE--TALIDTYFKCGRPTEARYL 196
Query: 491 IKKIPMAPDSVMWGALLGGCVSHGNLE 517
KK+ + V W ++GG +G E
Sbjct: 197 FKKLKDRSNIVAWNVMIGGFGENGLWE 223
>gi|449437737|ref|XP_004136647.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Cucumis sativus]
Length = 649
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 194/616 (31%), Positives = 318/616 (51%), Gaps = 88/616 (14%)
Query: 3 GKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSW 62
GK G + +A++VF+ MP+RD VSW +V+T G++ EA +R ++ N+V+W
Sbjct: 77 GKEGKIGEARQVFEEMPDRDVVSWTAVITGYIKCGMIEEAKTLFDR----NDAIKNVVTW 132
Query: 63 SAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITR 122
+A++ G+ + EEA R L +P
Sbjct: 133 TALVSGYVRWNRIEEA----------------RRLFDAMP-------------------- 156
Query: 123 NGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAREL 182
+ N N +++ Y R G + AL +F K +N VS NT+I + + V EA+EL
Sbjct: 157 ---VKNVISWNTMIEGYARKGWIDQALDLFEKMPERNVVSWNTVITAFMQRRRVDEAQEL 213
Query: 183 FDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACA 242
F++M +R +ISW +M++G N D+A +F + +R+ + ++ +++I A
Sbjct: 214 FNRMP----ERDVISWTTMVAGLSKNGRIDDARLLFDKMPVRNVV-----SWNTMIIGYA 264
Query: 243 DMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKM 302
L + ++ L S + ++ + ++E + KM
Sbjct: 265 QNMRLDEAFKLFEQMPERELSS--------------WNTMITGFIQNGKLERAVDFFYKM 310
Query: 303 KEDGFEPNVYTWNA--------------MQLFSEMLSLD-LTPDIYTVGIILSACSSLAT 347
NV TW A +++FSEM + + + P+ T +L ACS LA
Sbjct: 311 SN----KNVVTWTAVISGHVQDGRSEEALKIFSEMQAANNVKPNEGTFVSVLGACSKLAA 366
Query: 348 MERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYK--RISTPDLVSQNAML 405
+ G+Q+H + Y + +AL++MY+KCG L+ AR + I D+VS N M+
Sbjct: 367 LCEGQQIHQIISKTVYQEVADVVSALINMYSKCGELELARKIFDDGSIGHRDVVSWNGMI 426
Query: 406 TAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFD-LMAYYDV 464
AYA HGHG + I+ F + A GFRPD++++++ LSAC HAG + G + F+ L+ +
Sbjct: 427 AAYAHHGHGHKAISLFDEMQALGFRPDNVTYIALLSACSHAGLVDEGLKLFENLVRDRSI 486
Query: 465 KPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAAD 524
K H+TC+VDL RAG L EA++FIK + + P + +W ALL GC HG+++ G++ A+
Sbjct: 487 KLREDHFTCLVDLFGRAGRLQEAFDFIKGLEVKPSASVWAALLAGCNVHGHIDLGKLTAE 546
Query: 525 RLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFR 584
+L+E EP N G Y++L+N++A G+W + A R KMKD+ + K PGCSWIE + +H F
Sbjct: 547 KLLETEPENAGTYLVLSNIYASTGKWREAAGVRMKMKDKGLKKQPGCSWIEVGNTVHVFV 606
Query: 585 ASDRSHDRSEEIYTII 600
D SH E IY ++
Sbjct: 607 VGDNSHREFENIYLLL 622
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 113/431 (26%), Positives = 199/431 (46%), Gaps = 51/431 (11%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y + +++A+++F MP ++ +SWN+++ A G + +AL+ E+M N+VS
Sbjct: 139 YVRWNRIEEARRLFDAMPVKNVISWNTMIEGYARKGWIDQALDLFEKMPE-----RNVVS 193
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W+ VI F Q +EA + RM + + T+ + L R+ L F
Sbjct: 194 WNTVITAFMQRRRVDEAQELFNRMPERDV-ISWTTMVAGLSKNGRIDDARL--LFDKMPV 250
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
RN N ++ Y + + A K+F + + S NT+I G+ +NG + A +
Sbjct: 251 RNVVSWNTMIIG-----YAQNMRLDEAFKLFEQMPERELSSWNTMITGFIQNGKLERAVD 305
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
F +M + + +++W ++ISG+V + +EA +F ++ + ++P TF SVL AC
Sbjct: 306 FFYKMSN----KNVVTWTAVISGHVQDGRSEEALKIFSEMQAANNVKPNEGTFVSVLGAC 361
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK 301
+ + +L +G++IH + Q V AL+ MY + +L A+ FD+ G
Sbjct: 362 SKLAALCEGQQIHQIISKTVYQEVADVVSALINMYSKCGELELARKIFDD--------GS 413
Query: 302 MKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSSLAT 347
+ +V +WN M LF EM +L PD T +LSACS
Sbjct: 414 IG----HRDVVSWNGMIAAYAHHGHGHKAISLFDEMQALGFRPDNVTYIALLSACSHAGL 469
Query: 348 MERGKQVHAYAIRCGYDSDVHIG----TALVDMYAKCGSLKHARLAYKRIST-PDLVSQN 402
++ G ++ +R D + + T LVD++ + G L+ A K + P
Sbjct: 470 VDEGLKLFENLVR---DRSIKLREDHFTCLVDLFGRAGRLQEAFDFIKGLEVKPSASVWA 526
Query: 403 AMLTAYAMHGH 413
A+L +HGH
Sbjct: 527 ALLAGCNVHGH 537
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 92/476 (19%), Positives = 190/476 (39%), Gaps = 87/476 (18%)
Query: 127 SNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQM 186
SN N L+ + G + A ++F + ++ VS +I GY + G + EA+ LFD+
Sbjct: 64 SNVARSNWLITQLGKEGKIGEARQVFEEMPDRDVVSWTAVITGYIKCGMIEEAKTLFDRN 123
Query: 187 EHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNS 246
+ + + +++W +++SGYV + +EA +F + +++ I + G
Sbjct: 124 DAI---KNVVTWTALVSGYVRWNRIEEARRLFDAMPVKNVISWNTMIEGYA--------- 171
Query: 247 LRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDG 306
RKG AL + + V + ++ A M ++ + L +M
Sbjct: 172 -RKGWIDQALDLFEKMPERNVVS---------WNTVITAFMQRRRVDEAQELFNRMP--- 218
Query: 307 FEPNVYTWNAM--------QLFSEMLSLDLTPDIYTVG---IILSACSSLATMERGKQVH 355
E +V +W M ++ L D P V +I+ ++ E K
Sbjct: 219 -ERDVISWTTMVAGLSKNGRIDDARLLFDKMPVRNVVSWNTMIIGYAQNMRLDEAFKLFE 277
Query: 356 AYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGK 415
R ++ ++ + + G L+ A + ++S ++V+ A+++ + G +
Sbjct: 278 QMPER-----ELSSWNTMITGFIQNGKLERAVDFFYKMSNKNVVTWTAVISGHVQDGRSE 332
Query: 416 EGIAHFRRI-LASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCM 474
E + F + A+ +P+ +F+S L AC ++ G + +++ + + +
Sbjct: 333 EALKIFSEMQAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVSAL 392
Query: 475 VDLLSRAGELGEA------------------------------------YEFIKKIPMAP 498
+++ S+ GEL A ++ ++ + P
Sbjct: 393 INMYSKCGELELARKIFDDGSIGHRDVVSWNGMIAAYAHHGHGHKAISLFDEMQALGFRP 452
Query: 499 DSVMWGALLGGC-----VSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGR 549
D+V + ALL C V G F + DR I+L + ++ L +LF AGR
Sbjct: 453 DNVTYIALLSACSHAGLVDEGLKLFENLVRDRSIKLRED---HFTCLVDLFGRAGR 505
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 63/174 (36%), Gaps = 39/174 (22%)
Query: 1 MYGKCGSLDDAKKVFK--MMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPN 58
MY KCG L+ A+K+F + RD VSWN ++ A
Sbjct: 395 MYSKCGELELARKIFDDGSIGHRDVVSWNGMIAA-------------------------- 428
Query: 59 LVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLG-KEFH 117
+ +G+ +AI + MQA G P+ T ++L AC+ + G K F
Sbjct: 429 ----------YAHHGHGHKAISLFDEMQALGFRPDNVTYIALLSACSHAGLVDEGLKLFE 478
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYC 171
+ LVD++ R G + A +K S ++ C
Sbjct: 479 NLVRDRSIKLREDHFTCLVDLFGRAGRLQEAFDFIKGLEVKPSASVWAALLAGC 532
>gi|125527494|gb|EAY75608.1| hypothetical protein OsI_03512 [Oryza sativa Indica Group]
Length = 608
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 175/552 (31%), Positives = 296/552 (53%), Gaps = 9/552 (1%)
Query: 51 SLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKL 110
++ TP L +I ++ +E + + G + + V+ +CA L
Sbjct: 44 AVPRPTPALCG--TLISALSRLCSHQELLDAFSSLHRRGSDVPPGCVPLVVKSCAILAAS 101
Query: 111 SLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGY 170
GK+ H + G + + FV LVD Y + GDM A+K+F + +K+ + N +I GY
Sbjct: 102 RQGKQVHCHAIVRGLLGDIFVQTALVDFYAKNGDMDCAVKVFDEMPVKDPIPMNCLITGY 161
Query: 171 CENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPT 230
++G+V +AR LFD M V+R SWNSMI+ Y Y EA +FR +L +G P
Sbjct: 162 SKSGDVVKARRLFDGM----VRRTSASWNSMIACYAHGGEYQEALRLFRRML-SEGARPN 216
Query: 231 SFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFD 290
+ T ++ CA L GK +L LQ + V AL+EMY + Q + A+ FD
Sbjct: 217 AITIATMFSICAKTGDLETGKWARSLIAEQDLQ-NMIVHTALMEMYVKCQAIDEARREFD 275
Query: 291 EIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMER 350
++ + + G+ N +++LF M + P+ T+ +LSAC+ L + E
Sbjct: 276 RMQQRDVVAWSTMIAGYAQNGRPHESLELFERMKATSCKPNEVTLVGVLSACAQLGSDEL 335
Query: 351 GKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAM 410
G Q+ ++ ++G+AL+DMY KCG + AR + R+ +++ N+M+ A+
Sbjct: 336 GGQIGSHVESQNLPLTSYLGSALIDMYTKCGHVGRARSVFNRMEHKVVITWNSMMRGLAL 395
Query: 411 HGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFF-DLMAYYDVKPSLK 469
+G ++ I ++ + +P+ I+F++ L+AC HAG + G FF ++ + V P ++
Sbjct: 396 NGFAQDAITLYKEMTEEDVQPNEITFVALLTACTHAGLVDQGMSFFKEMKTIHHVSPQVE 455
Query: 470 HYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIEL 529
H C+VDLL ++G L EAY+FI + + P++V+W LL C +H ++E ++AA +L+ L
Sbjct: 456 HCACIVDLLCKSGRLREAYKFICDMEVEPNAVIWSTLLSACRAHADVELAKLAASKLLVL 515
Query: 530 EPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRS 589
EP+N+ YV+L+N++A AG W D+ R M+ + + K SWIE E+HKF D
Sbjct: 516 EPDNSSIYVLLSNIYADAGLWGDVREIRDLMRSKNVQKLSAYSWIELDGEVHKFLVQDTY 575
Query: 590 HDRSEEIYTIID 601
H +S EI+ ++D
Sbjct: 576 HPKSAEIFNVVD 587
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 128/512 (25%), Positives = 219/512 (42%), Gaps = 75/512 (14%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y K G +D A KVF MP +D + N ++T + +G V++A + M + S
Sbjct: 130 YAKNGDMDCAVKVFDEMPVKDPIPMNCLITGYSKSGDVVKARRLFDGMVRRTS-----AS 184
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W+++I + G +EA+ + RM +EG PNA T++++ CA+ L GK I
Sbjct: 185 WNSMIACYAHGGEYQEALRLFRRMLSEGARPNAITIATMFSICAKTGDLETGKWARSLIA 244
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
+ N V L+++Y +C + A + F + ++ V+ +T+I GY +NG E+ E
Sbjct: 245 EQD-LQNMIVHTALMEMYVKCQAIDEARREFDRMQQRDVVAWSTMIAGYAQNGRPHESLE 303
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
LF++M+ + P T VL AC
Sbjct: 304 LFERMKATSCK------------------------------------PNEVTLVGVLSAC 327
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK 301
A + S G +I + + L +++G AL++MY + + A+ F+ +E+ +
Sbjct: 328 AQLGSDELGGQIGSHVESQNLPLTSYLGSALIDMYTKCGHVGRARSVFNRMEHKVVITWN 387
Query: 302 MKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG-------KQV 354
G N + +A+ L+ EM D+ P+ T +L+AC+ +++G K +
Sbjct: 388 SMMRGLALNGFAQDAITLYKEMTEEDVQPNEITFVALLTACTHAGLVDQGMSFFKEMKTI 447
Query: 355 HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS----TPDLVSQNAMLTAYAM 410
H + V +VD+ K G L R AYK I P+ V + +L+A
Sbjct: 448 HHVS------PQVEHCACIVDLLCKSGRL---REAYKFICDMEVEPNAVIWSTLLSACRA 498
Query: 411 HGHGKEGIAHFRRILASGFRPDHISFLSALSAC-VHAGSIKTGSEFFDLMAYYDVKPSLK 469
H + ++L PD+ S LS AG E DLM +V+ L
Sbjct: 499 HADVELAKLAASKLLV--LEPDNSSIYVLLSNIYADAGLWGDVREIRDLMRSKNVQ-KLS 555
Query: 470 HYTCMVDLLSRAGEL-GEAYEFIKKIPMAPDS 500
Y+ + EL GE ++F+ + P S
Sbjct: 556 AYSWI--------ELDGEVHKFLVQDTYHPKS 579
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 102/229 (44%), Gaps = 36/229 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC ++D+A++ F M +RD V+W++++ A NG E+LE ERM + + PN V
Sbjct: 260 MYVKCQAIDEARREFDRMQQRDVVAWSTMIAGYAQNGRPHESLELFERMKATSCK-PNEV 318
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+ V+ Q G DE LG + ++
Sbjct: 319 TLVGVLSACAQLGSDE-----------------------------------LGGQIGSHV 343
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
++ + L+D+Y +CG + A +F++ K ++ N+++ G NG +A
Sbjct: 344 ESQNLPLTSYLGSALIDMYTKCGHVGRARSVFNRMEHKVVITWNSMMRGLALNGFAQDAI 403
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEP 229
L+ +M VQ I++ ++++ L D+ S F+++ + P
Sbjct: 404 TLYKEMTEEDVQPNEITFVALLTACTHAGLVDQGMSFFKEMKTIHHVSP 452
>gi|125543632|gb|EAY89771.1| hypothetical protein OsI_11313 [Oryza sativa Indica Group]
Length = 798
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 188/605 (31%), Positives = 317/605 (52%), Gaps = 34/605 (5%)
Query: 3 GKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSW 62
+ G+++ A+ F+ MP R S+N+++ N L AL RM S D L S+
Sbjct: 28 ARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRD-----LASY 82
Query: 63 SAVIGGFT---QNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
+A+I G + Q D A + + P+ + +S+L R L+
Sbjct: 83 NALISGLSLRRQTLPDAAAA-----LASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQ 137
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ +S ++ GL+D G + A ++F + ++ V+ ++ GYC+ G + EA
Sbjct: 138 MPERNHVSYTVLLGGLLD----AGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEA 193
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
R LFD+M +R ++SW +MISGY N + A +F + R+ + T+ G +
Sbjct: 194 RALFDEMP----KRNVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAMLVGYIQA 249
Query: 240 A-CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
D L H +A A++ + + + AA+ F+++ ++
Sbjct: 250 GHVEDAAELFNAMPEHPVAAC----------NAMMVGFGQRGMVDAAKTVFEKMRERDDG 299
Query: 299 LGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYA 358
+E N + A+ F EML + P+ +V IL+ C++LA ++ G++VHA
Sbjct: 300 TWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAM 359
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGI 418
+RC +D DV +AL+ MY KCG+L A+ + D+V N+M+T YA HG G++ +
Sbjct: 360 LRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQAL 419
Query: 419 AHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDL 477
F + +G PD I+++ AL+AC + G +K G E F+ M ++P +HY+CMVDL
Sbjct: 420 GIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDL 479
Query: 478 LSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNY 537
L R+G + EA++ IK +P+ PD+V+WGAL+G C H N E ++AA +L+ELEP N G Y
Sbjct: 480 LGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIAEVAAKKLLELEPGNAGPY 539
Query: 538 VMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASD-RSHDRSEEI 596
V+L++++ GRW D ++ R+ + R ++KSPGCSWIE +H F + D +H I
Sbjct: 540 VLLSHIYTSVGRWEDASKMRKFISSRNLNKSPGCSWIEYDKRVHLFTSGDVLAHPEHAAI 599
Query: 597 YTIID 601
I++
Sbjct: 600 LRILE 604
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 103/412 (25%), Positives = 193/412 (46%), Gaps = 20/412 (4%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y + G L DA ++F+ MPER+ VS+ ++ G V EA + M D +V+
Sbjct: 122 YVRHGLLADAIRLFQQMPERNHVSYTVLLGGLLDAGRVNEARRLFDEMPDRD-----VVA 176
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W+A++ G+ Q G EA + M N + ++++ A+ +++L ++ +
Sbjct: 177 WTAMLSGYCQAGRITEARALFDEMPKR----NVVSWTAMISGYAQNGEVNLARKLFEVMP 232
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
+S ++ G Y + G + A ++F+ +CN ++VG+ + G V A+
Sbjct: 233 ERNEVSWTAMLVG----YIQAGHVEDAAELFNAMPEHPVAACNAMMVGFGQRGMVDAAKT 288
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
+F++M +R +W++MI Y N EA S FR++L R G+ P + S+L C
Sbjct: 289 VFEKMR----ERDDGTWSAMIKAYEQNEFLMEALSTFREMLWR-GVRPNYPSVISILTVC 343
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK 301
A + L G+E+HA + D F AL+ MY + +L A+ F E + ++
Sbjct: 344 AALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWN 403
Query: 302 MKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV-HAYAIR 360
G+ + A+ +F +M ++PD T L+ACS ++ G+++ ++ +
Sbjct: 404 SMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVN 463
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST-PDLVSQNAMLTAYAMH 411
+ +VD+ + G ++ A K + PD V A++ A MH
Sbjct: 464 SSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMH 515
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 78/190 (41%), Gaps = 42/190 (22%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG+LD AK+VF +D V WNS++T
Sbjct: 377 MYIKCGNLDKAKRVFHTFEPKDIVMWNSMIT----------------------------- 407
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
G+ Q+G E+A+G+ M+ G+ P+ T L AC+ K+ G+E +
Sbjct: 408 -------GYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSM 460
Query: 121 TRN-GFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYC---ENGNV 176
T N + +VD+ R G + A + ++ + ++G C N +
Sbjct: 461 TVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEI 520
Query: 177 AE--ARELFD 184
AE A++L +
Sbjct: 521 AEVAAKKLLE 530
>gi|225440783|ref|XP_002275884.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570 [Vitis vinifera]
Length = 561
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 175/521 (33%), Positives = 280/521 (53%), Gaps = 46/521 (8%)
Query: 56 TPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKE 115
+P+ V W+ I G+++N + + RM+ P+ T S++ AC+++ + G
Sbjct: 85 SPSTVLWNTYIKGYSENYSVSLTVSLFIRMKRSDAVPDKFTYPSLIKACSKVCGVKEGVA 144
Query: 116 FHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGN 175
FHG R G + FV+ L+D+Y +CG++L A K+F + +N VS +I GY +
Sbjct: 145 FHGSAVRCGVGGDVFVMTSLIDLYGKCGEILCARKVFDEMGERNVVSWTAMIAGYASFSD 204
Query: 176 VAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFG 235
+ EAR+LFD+M ++ +SWN++ISGYV A MF ++ R+ + SFT
Sbjct: 205 LVEARKLFDEMP----EKNAVSWNAIISGYVKCGDLRSARKMFDEMPHRNVV---SFT-- 255
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
+++ Y + D+ +A+ F+E
Sbjct: 256 -----------------------------------TMIDGYAKSGDMASARFVFEEAPER 280
Query: 296 ENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVH 355
+ + G+ N A+++F EM S ++ PD + + ++SACS + ++E K V
Sbjct: 281 DVVAWSALISGYVQNGQPNEAVKIFLEMCSRNVKPDEFIMVSLMSACSQMGSLELAKWVD 340
Query: 356 AYAIRCGYD-SDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHG 414
Y + D H+ AL+DM AKCGS+ A ++ + DL+S +M+ ++HG G
Sbjct: 341 DYVRKSSIDVHRAHVIAALIDMNAKCGSMDRATKLFEEMPKRDLISYCSMMQGLSIHGCG 400
Query: 415 KEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTC 473
+ ++ F R+L G PD ++F L+AC AG + G +F+ M Y + PS HY C
Sbjct: 401 PQAVSLFSRMLNEGLTPDDVAFTVILTACSRAGLVDEGCYYFESMKTDYSIVPSPDHYAC 460
Query: 474 MVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNN 533
MVDLL RAG L EAYE +K +P+ P + WGALLG C H ++E G++ AD+L ELEP N
Sbjct: 461 MVDLLGRAGRLKEAYELLKSMPVEPHAGAWGALLGACKLHCDIELGEVVADQLFELEPQN 520
Query: 534 TGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWI 574
GNYV+L+N++A A +W D++ R KM++R + K PGCSWI
Sbjct: 521 AGNYVLLSNIYAAAEQWLDVSLLRNKMRERGIRKIPGCSWI 561
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 133/286 (46%), Gaps = 12/286 (4%)
Query: 230 TSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAF 289
T+ + ++L AC ++L +++HA I GL D F+ + + + F
Sbjct: 24 TTSSISTLLKACTTTSTL---EQVHARIIRKGLHQDHFIISQFLTLCNSLSNFSYTTSVF 80
Query: 290 DEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATME 349
+ + + +L G+ N + LF M D PD +T ++ ACS + ++
Sbjct: 81 NGVSSPSTVLWNTYIKGYSENYSVSLTVSLFIRMKRSDAVPDKFTYPSLIKACSKVCGVK 140
Query: 350 RGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYA 409
G H A+RCG DV + T+L+D+Y KCG + AR + + ++VS AM+ YA
Sbjct: 141 EGVAFHGSAVRCGVGGDVFVMTSLIDLYGKCGEILCARKVFDEMGERNVVSWTAMIAGYA 200
Query: 410 MHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLK 469
E R++ + +S+ + +S V G +++ + FD M + +V
Sbjct: 201 SFSDLVEA----RKLFDEMPEKNAVSWNAIISGYVKCGDLRSARKMFDEMPHRNV----V 252
Query: 470 HYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
+T M+D +++G++ A ++ P D V W AL+ G V +G
Sbjct: 253 SFTTMIDGYAKSGDMASARFVFEEAP-ERDVVAWSALISGYVQNGQ 297
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/434 (21%), Positives = 180/434 (41%), Gaps = 77/434 (17%)
Query: 96 TLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKF 155
++S++L AC L ++ H I R G + F+++ + + + +F+
Sbjct: 27 SISTLLKACTTTSTL---EQVHARIIRKGLHQDHFIISQFLTLCNSLSNFSYTTSVFNGV 83
Query: 156 SIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAF 215
S + V NT I GY EN +V+ LF +M+
Sbjct: 84 SSPSTVLWNTYIKGYSENYSVSLTVSLFIRMK---------------------------- 115
Query: 216 SMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEM 275
R P FT+ S++ AC+ + +++G H A+ G+ D FV +L+++
Sbjct: 116 --------RSDAVPDKFTYPSLIKACSKVCGVKEGVAFHGSAVRCGVGGDVFVMTSLIDL 167
Query: 276 YCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAM----QLFSEMLS----LD 327
Y + +++ A+ FDE+ E NV +W AM FS+++ D
Sbjct: 168 YGKCGEILCARKVFDEMG--------------ERNVVSWTAMIAGYASFSDLVEARKLFD 213
Query: 328 LTPDIYTVG--IILSACSSLATMERGKQVHAYAIRCGYDSDVHIG----TALVDMYAKCG 381
P+ V I+S + +++ +D H T ++D YAK G
Sbjct: 214 EMPEKNAVSWNAIISGYVKCGDLRSARKM--------FDEMPHRNVVSFTTMIDGYAKSG 265
Query: 382 SLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALS 441
+ AR ++ D+V+ +A+++ Y +G E + F + + +PD +S +S
Sbjct: 266 DMASARFVFEEAPERDVVAWSALISGYVQNGQPNEAVKIFLEMCSRNVKPDEFIMVSLMS 325
Query: 442 ACVHAGSIKTGSEFFDLMAYYDVKPSLKHY-TCMVDLLSRAGELGEAYEFIKKIPMAPDS 500
AC GS++ D + + H ++D+ ++ G + A + +++P D
Sbjct: 326 ACSQMGSLELAKWVDDYVRKSSIDVHRAHVIAALIDMNAKCGSMDRATKLFEEMP-KRDL 384
Query: 501 VMWGALLGGCVSHG 514
+ + +++ G HG
Sbjct: 385 ISYCSMMQGLSIHG 398
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 146/302 (48%), Gaps = 14/302 (4%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y KCG L A+K+F MP R+ VS+ +++ A +G + A E D +V+
Sbjct: 230 YVKCGDLRSARKMFDEMPHRNVVSFTTMIDGYAKSGDMASARFVFEEAPERD-----VVA 284
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
WSA+I G+ QNG EA+ + M + ++P+ + S++ AC+++ L L K Y+
Sbjct: 285 WSALISGYVQNGQPNEAVKIFLEMCSRNVKPDEFIMVSLMSACSQMGSLELAKWVDDYVR 344
Query: 122 RNGF-MSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
++ + V+ L+D+ +CG M A K+F + ++ +S +++ G +G +A
Sbjct: 345 KSSIDVHRAHVIAALIDMNAKCGSMDRATKLFEEMPKRDLISYCSMMQGLSIHGCGPQAV 404
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LF +M + G+ +++ +++ L DE F + I P+ + ++
Sbjct: 405 SLFSRMLNEGLTPDDVAFTVILTACSRAGLVDEGCYYFESMKTDYSIVPSPDHYACMVDL 464
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALV---EMYCRYQ--DLVAAQMAFDEIENI 295
L KE + L ++ ++ GAL+ +++C + ++VA Q+ E +N
Sbjct: 465 LGRAGRL---KEAYELLKSMPVEPHAGAWGALLGACKLHCDIELGEVVADQLFELEPQNA 521
Query: 296 EN 297
N
Sbjct: 522 GN 523
>gi|357461615|ref|XP_003601089.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355490137|gb|AES71340.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 745
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 179/562 (31%), Positives = 302/562 (53%), Gaps = 38/562 (6%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGSL DA++VF +P ++ SWN+++ A GL+ +A++ ++M P++V
Sbjct: 149 MYVKCGSLRDAQRVFCEIPCKNATSWNTLILGYAKQGLIDDAMKLFDKMPE-----PDIV 203
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+++I G N A+ + M +GL+ + T SVL AC +L LG+E H YI
Sbjct: 204 SWNSIIAGLVDNA-SSRALRFVSMMHGKGLKMDEFTFPSVLKACGCSDELMLGREIHCYI 262
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
++GF S+ + ++ L+D+Y C + A KIF + Y N +V+E+
Sbjct: 263 IKSGFESSCYCISALIDMYSSCKLLSEATKIFDQ---------------YFRNSSVSESL 307
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
L WNSM+SG+V N Y EA SM + R G+ +TF VL
Sbjct: 308 AL---------------WNSMLSGHVVNGDYVEALSMISHM-HRSGVRFDFYTFSIVLKI 351
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C + ++L ++H I G + D VG L+++Y + + A F+ + + + +
Sbjct: 352 CMNFDNLSLASQVHGFVITSGYELDCVVGSILIDIYAKQGSINNALRLFERLPDKDVVAW 411
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G A LF +M+ L L D + + I+L ACSSLA+ + GKQVH+ ++
Sbjct: 412 SSLITGCARFGSDKLAFSLFMDMIHLGLQIDHFVISIVLKACSSLASHQHGKQVHSLCLK 471
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
GY+S+ + TAL+DMYAKCG ++ A + +S D +S +++ A +G +E I+
Sbjct: 472 KGYESEGVVTTALIDMYAKCGDIEDALSLFGCLSEIDTMSWTSIIVGCAQNGRAEEAISL 531
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFD-LMAYYDVKPSLKHYTCMVDLLS 479
+++ SG +P+ I+ L L+AC H+G ++ + F+ + + + P +HY CMVD+L
Sbjct: 532 LHKMIESGTKPNKITILGVLTACRHSGLVEEAWDVFNSIETNHGLIPCPEHYNCMVDILG 591
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
+AG EA + I ++P PD +W +LLG C ++ N + I A+ L+ P + Y+M
Sbjct: 592 QAGRFEEAVKLISEMPFKPDKTIWSSLLGACGTYKNRDLANIVAEHLLATSPEDVSVYIM 651
Query: 540 LANLFAYAGRWSDLARTRQKMK 561
L+N++A G W +++ R+ +K
Sbjct: 652 LSNVYAALGMWDSVSKVRETVK 673
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 147/549 (26%), Positives = 250/549 (45%), Gaps = 69/549 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KC S+ DA+ +F MP R N+V
Sbjct: 47 VYSKCSSIIDARNMFDEMPHR------------------------------------NIV 70
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLE-PNARTLSSVLPACARLQKLSLGKEFHGY 119
SW+ ++ T + EA+ + M +E PN S+VL AC ++ + LGK H +
Sbjct: 71 SWTTMVSVLTNSSMPHEALSLYNEMIESKIEQPNQFLYSAVLKACGLVRNVELGKMVHYH 130
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
I + + ++N L+D+Y +CG + A ++F + KN S NT+I+GY + G + +A
Sbjct: 131 IFQAKLDVDIVLMNALLDMYVKCGSLRDAQRVFCEIPCKNATSWNTLILGYAKQGLIDDA 190
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
+LFD+M + I+SWNS+I+G VDN+ F ++ G++ FTF SVL
Sbjct: 191 MKLFDKMP----EPDIVSWNSIIAGLVDNA--SSRALRFVSMMHGKGLKMDEFTFPSVLK 244
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
AC + L G+EIH I G +S + AL++MY + L A FD+
Sbjct: 245 ACGCSDELMLGREIHCYIIKSGFESSCYCISALIDMYSSCKLLSEATKIFDQY------- 297
Query: 300 GKMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSSL 345
+ ++ WN+M + S M + D YT I+L C +
Sbjct: 298 --FRNSSVSESLALWNSMLSGHVVNGDYVEALSMISHMHRSGVRFDFYTFSIVLKICMNF 355
Query: 346 ATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAML 405
+ QVH + I GY+ D +G+ L+D+YAK GS+ +A ++R+ D+V+ ++++
Sbjct: 356 DNLSLASQVHGFVITSGYELDCVVGSILIDIYAKQGSINNALRLFERLPDKDVVAWSSLI 415
Query: 406 TAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVK 465
T A G K + F ++ G + DH L AC S + G + L +
Sbjct: 416 TGCARFGSDKLAFSLFMDMIHLGLQIDHFVISIVLKACSSLASHQHGKQVHSLCLKKGYE 475
Query: 466 PSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADR 525
T ++D+ ++ G++ +A + D++ W +++ GC +G E +
Sbjct: 476 SEGVVTTALIDMYAKCGDIEDALSLFGCLS-EIDTMSWTSIIVGCAQNGRAEEAISLLHK 534
Query: 526 LIE--LEPN 532
+IE +PN
Sbjct: 535 MIESGTKPN 543
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 109/449 (24%), Positives = 205/449 (45%), Gaps = 75/449 (16%)
Query: 104 CARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSC 163
C R + + K H +I ++GF ++ F++N ++ VY +C ++
Sbjct: 13 CIRFRSIKNAKSLHSHIIKSGFCNHIFILNNMISVYSKCSSII----------------- 55
Query: 164 NTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLM 223
+AR +FD+M H R I+SW +M+S ++S+ EA S++ +++
Sbjct: 56 --------------DARNMFDEMPH----RNIVSWTTMVSVLTNSSMPHEALSLYNEMIE 97
Query: 224 RDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLV 283
+P F + +VL AC + ++ GK +H L D + AL++MY + L
Sbjct: 98 SKIEQPNQFLYSAVLKACGLVRNVELGKMVHYHIFQAKLDVDIVLMNALLDMYVKCGSLR 157
Query: 284 AAQMAFDEI--ENIEN----LLGKMKE----DGF-------EPNVYTWN----------- 315
AQ F EI +N + +LG K+ D EP++ +WN
Sbjct: 158 DAQRVFCEIPCKNATSWNTLILGYAKQGLIDDAMKLFDKMPEPDIVSWNSIIAGLVDNAS 217
Query: 316 --AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTAL 373
A++ S M L D +T +L AC + G+++H Y I+ G++S + +AL
Sbjct: 218 SRALRFVSMMHGKGLKMDEFTFPSVLKACGCSDELMLGREIHCYIIKSGFESSCYCISAL 277
Query: 374 VDMYAKCGSLKHARLAYKRISTPDLVSQ-----NAMLTAYAMHGHGKEGIAHFRRILASG 428
+DMY+ C L A + + VS+ N+ML+ + ++G E ++ + SG
Sbjct: 278 IDMYSSCKLLSEATKIFDQYFRNSSVSESLALWNSMLSGHVVNGDYVEALSMISHMHRSG 337
Query: 429 FRPDHISFLSALSACVHAGSIKTGSEF--FDLMAYYDVKPSLKHYTCMVDLLSRAGELGE 486
R D +F L C++ ++ S+ F + + Y++ + + ++D+ ++ G +
Sbjct: 338 VRFDFYTFSIVLKICMNFDNLSLASQVHGFVITSGYELDCVVG--SILIDIYAKQGSINN 395
Query: 487 AYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
A +++P D V W +L+ GC G+
Sbjct: 396 ALRLFERLP-DKDVVAWSSLITGCARFGS 423
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/201 (19%), Positives = 90/201 (44%), Gaps = 6/201 (2%)
Query: 331 DIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAY 390
D+ + I C +++ K +H++ I+ G+ + + I ++ +Y+KC S+ AR +
Sbjct: 2 DLNHIQIAFRYCIRFRSIKNAKSLHSHIIKSGFCNHIFILNNMISVYSKCSSIIDARNMF 61
Query: 391 KRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGF-RPDHISFLSALSACVHAGSI 449
+ ++VS M++ E ++ + ++ S +P+ + + L AC ++
Sbjct: 62 DEMPHRNIVSWTTMVSVLTNSSMPHEALSLYNEMIESKIEQPNQFLYSAVLKACGLVRNV 121
Query: 450 KTGS--EFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALL 507
+ G + A DV L + ++D+ + G L +A +IP ++ W L+
Sbjct: 122 ELGKMVHYHIFQAKLDVDIVLMN--ALLDMYVKCGSLRDAQRVFCEIP-CKNATSWNTLI 178
Query: 508 GGCVSHGNLEFGQIAADRLIE 528
G G ++ D++ E
Sbjct: 179 LGYAKQGLIDDAMKLFDKMPE 199
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 104/267 (38%), Gaps = 62/267 (23%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG ++DA +F + E D +SW S++ CA NG EA+ L +M PN +
Sbjct: 487 MYAKCGDIEDALSLFGCLSEIDTMSWTSIIVGCAQNGRAEEAISLLHKMIE-SGTKPNKI 545
Query: 61 SWSAVI-----GGFTQNGYD-------------------------------EEAIGMLFR 84
+ V+ G + +D EEA+ ++
Sbjct: 546 TILGVLTACRHSGLVEEAWDVFNSIETNHGLIPCPEHYNCMVDILGQAGRFEEAVKLISE 605
Query: 85 MQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNG--------FMSNPFVVNGLV 136
M +P+ SS+L AC + L ++ +SN + G+
Sbjct: 606 MP---FKPDKTIWSSLLGACGTYKNRDLANIVAEHLLATSPEDVSVYIMLSNVYAALGMW 662
Query: 137 DVYRRCGDMLSAL------KIFSKFSIKNEVSCNTIIVGYCENG-NVAEARELFDQMEHL 189
D + + + + KIF + K + +G+ + G N + ++ +E
Sbjct: 663 DSVSKVRETVKKIGKKRAGKIFYEIPFKFYFM-EHLHLGHAKQGLNGGVVKVIYPILE-- 719
Query: 190 GVQRGIISWNSMISGYVDN-SLYDEAF 215
++SWN++I+G DN S Y+ F
Sbjct: 720 ---PDLVSWNNVIAGLADNASPYEMQF 743
>gi|225460338|ref|XP_002280412.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Vitis vinifera]
Length = 802
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 203/610 (33%), Positives = 298/610 (48%), Gaps = 82/610 (13%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG +D A+ VF+ E D VS
Sbjct: 164 MYCKCGRIDWARLVFESADELDSVS----------------------------------- 188
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACAR--LQKLSLGKEFHG 118
W+++I G+ + G ++E + +L +M GL N+ L S L AC + GK HG
Sbjct: 189 -WNSLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHG 247
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
+ G + V L+D Y + GD+ A KIF N V N +I G
Sbjct: 248 CAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAG--------- 298
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
F QME + + +EA +F ++ R G++P+ FTF S+L
Sbjct: 299 ----FLQMETMA-----------------DEFANEAMYLFFEMQSR-GMKPSEFTFSSIL 336
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAF------DEI 292
AC+ + + GK+IHA LQSD F+G ALVE+Y + F D +
Sbjct: 337 KACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVV 396
Query: 293 ENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGK 352
++G ++ FE + LF E+L PD +T+ I+LSAC++LA ++ G+
Sbjct: 397 SWTSLIVGHVQNGQFE------GGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGE 450
Query: 353 QVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHG 412
Q+HAYAI+ G + I + + MYAKCG + A + +K PD+VS + M+++ A HG
Sbjct: 451 QIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHG 510
Query: 413 HGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHY 471
KE + F + SG P+HI+FL L AC H G ++ G +F++M + + P++KH
Sbjct: 511 CAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHS 570
Query: 472 TCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEP 531
C+VDLL RAG L EA FI D VMW +LL C H + G+ A+R+IELEP
Sbjct: 571 ACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVHKATDTGKRVAERVIELEP 630
Query: 532 NNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHD 591
+YV+L N++ AG R MKDR + K PG SWIE + +H F A DRSH
Sbjct: 631 EAAASYVLLYNIYNDAGIQMPATEIRNLMKDRGVKKEPGLSWIEVGNVVHSFVAGDRSHP 690
Query: 592 RSEEIYTIID 601
S+ IY ++
Sbjct: 691 NSQVIYVQLE 700
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 141/525 (26%), Positives = 226/525 (43%), Gaps = 88/525 (16%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG D AKK+F MP+R N+V
Sbjct: 63 MYCKCGETDVAKKLFDRMPKR------------------------------------NVV 86
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+++I G+TQ G+ E + + + L + T S+ L C R L LG+ H I
Sbjct: 87 SWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLGRLIHALI 146
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
T +G + N L+D+Y +CG + A +F + VS N++I GY G+ E
Sbjct: 147 TVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIGSNDEML 206
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
L +M +R G+ S+ GS L A
Sbjct: 207 RLLVKM------------------------------------LRHGLNLNSYALGSALKA 230
Query: 241 CAD--MNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
C +S+ GK +H A+ LGL D VG AL++ Y + DL A F + + +
Sbjct: 231 CGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVV 290
Query: 299 LGKMKEDGF-----EPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ 353
+ GF + + AM LF EM S + P +T IL ACS++ E GKQ
Sbjct: 291 MYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQ 350
Query: 354 VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGH 413
+HA + SD IG ALV++Y+ GS++ + D+VS +++ + +G
Sbjct: 351 IHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQ 410
Query: 414 GKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTC 473
+ G+ F +L SG +PD + LSAC + ++K+G + + Y +K + ++T
Sbjct: 411 FEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQ----IHAYAIKTGIGNFTI 466
Query: 474 M----VDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
+ + + ++ G++ A K+ PD V W ++ HG
Sbjct: 467 IQNSQICMYAKCGDIDSANMTFKETK-NPDIVSWSVMISSNAQHG 510
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 105/363 (28%), Positives = 178/363 (49%), Gaps = 13/363 (3%)
Query: 164 NTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLM 223
N ++ YC+ G A++LFD+M +R ++SWNS+ISGY Y E ++F++ M
Sbjct: 58 NNLLYMYCKCGETDVAKKLFDRMP----KRNVVSWNSLISGYTQMGFYHEVMNLFKEARM 113
Query: 224 RDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLV 283
D + FTF + L C LR G+ IHAL GL + +L++MYC+ +
Sbjct: 114 SD-LRLDKFTFSNALSVCGRTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRID 172
Query: 284 AAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACS 343
A++ F+ + ++++ G+ ++L +ML L + Y +G L AC
Sbjct: 173 WARLVFESADELDSVSWNSLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACG 232
Query: 344 S--LATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQ 401
S +++E GK +H A++ G D DV +GTAL+D YAK G L+ A +K + P++V
Sbjct: 233 SNFSSSIECGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMY 292
Query: 402 NAMLTAYAM-----HGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFF 456
NAM+ + E + F + + G +P +F S L AC + + G +
Sbjct: 293 NAMIAGFLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIH 352
Query: 457 DLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNL 516
+ Y+++ +V+L S +G + + + P D V W +L+ G V +G
Sbjct: 353 AQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKL-DVVSWTSLIVGHVQNGQF 411
Query: 517 EFG 519
E G
Sbjct: 412 EGG 414
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 121/286 (42%), Gaps = 3/286 (1%)
Query: 226 GIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAA 285
G+ S T+ ++ SL GK H I + F+ L+ MYC+ + A
Sbjct: 14 GLPLDSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDVA 73
Query: 286 QMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSL 345
+ FD + + G+ + M LF E DL D +T LS C
Sbjct: 74 KKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRT 133
Query: 346 ATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAML 405
+ G+ +HA G V + +L+DMY KCG + ARL ++ D VS N+++
Sbjct: 134 LDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLI 193
Query: 406 TAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSAC--VHAGSIKTGSEFFDLMAYYD 463
Y G E + ++L G + + SAL AC + SI+ G
Sbjct: 194 AGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLG 253
Query: 464 VKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
+ + T ++D ++ G+L +A + K +P P+ VM+ A++ G
Sbjct: 254 LDLDVVVGTALLDTYAKIGDLEDATKIFKLMP-DPNVVMYNAMIAG 298
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 83/190 (43%), Gaps = 1/190 (0%)
Query: 326 LDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKH 385
L L D T ++ + ++ GK H + I+ + + + L+ MY KCG
Sbjct: 13 LGLPLDSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDV 72
Query: 386 ARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVH 445
A+ + R+ ++VS N++++ Y G E + F+ S R D +F +ALS C
Sbjct: 73 AKKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGR 132
Query: 446 AGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGA 505
++ G L+ + + ++D+ + G + A + + DSV W +
Sbjct: 133 TLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWA-RLVFESADELDSVSWNS 191
Query: 506 LLGGCVSHGN 515
L+ G V G+
Sbjct: 192 LIAGYVRIGS 201
>gi|449475140|ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449522468|ref|XP_004168248.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 574
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 179/508 (35%), Positives = 288/508 (56%), Gaps = 50/508 (9%)
Query: 98 SSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSI 157
+S+L +C + + GK+ H I + G NP + LV++Y C + +A +F + S
Sbjct: 5 ASLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRIS- 63
Query: 158 KNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSM 217
+R + WN MI GY N Y+ A S+
Sbjct: 64 ----------------------------------KRNLFLWNVMIRGYAWNGPYELAISL 89
Query: 218 FRDLLMRD-GIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMY 276
+ MRD G+ P FTF VL AC+ ++++ +GK+IH I GL+SD FVG AL++MY
Sbjct: 90 YYQ--MRDYGLVPDKFTFPFVLKACSALSAMEEGKKIHKDVIRSGLESDVFVGAALIDMY 147
Query: 277 CRYQDLVAAQMAFDEIENIE-----NLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPD 331
+ + +A+ FD+I+ + ++L ++G +P+ ++ L M L P
Sbjct: 148 AKCGCVESARQVFDKIDERDVVCWNSMLATYSQNG-QPD----ESLALCRVMAFNGLKPT 202
Query: 332 IYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYK 391
T I ++A + + +GK++H Y+ R G++S+ + TAL+DMYAK GS+ AR ++
Sbjct: 203 EGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDKVKTALMDMYAKSGSVNVARSLFE 262
Query: 392 RISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKT 451
+ +VS NAM+T YAMHGH E + F+ + PDHI+F+ L+AC H G +
Sbjct: 263 LLEEKRVVSWNAMITGYAMHGHANEALDLFKE-MKGKVLPDHITFVGVLAACSHGGLLNE 321
Query: 452 GS-EFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGC 510
G F +++ +++ P+++HYTCM+DLL G L EAY+ I ++ + PD+ +WGALL C
Sbjct: 322 GKMHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEEAYKLIMEMRVEPDAGVWGALLHSC 381
Query: 511 VSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPG 570
HGN+E G++A ++L+ELEP++ GNYV+L+N++A AG+W +AR R M ++ + KS
Sbjct: 382 KIHGNVEMGELALEKLVELEPDDGGNYVILSNMYAQAGKWDGVARLRDLMMNKGLKKSIA 441
Query: 571 CSWIEDRDEIHKFRASDRSHDRSEEIYT 598
CSWIE +++H F + D SH +SE IY
Sbjct: 442 CSWIEVGNKVHAFLSEDTSHPKSEAIYA 469
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 145/287 (50%), Gaps = 11/287 (3%)
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
+ S+L +C ++ GK++HA +G+ + + LV +YC L A + FD I
Sbjct: 4 YASLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRIS 63
Query: 294 NIENLLGKMKEDGFEPNVYTWN-----AMQLFSEMLSLDLTPDIYTVGIILSACSSLATM 348
L + G Y WN A+ L+ +M L PD +T +L ACS+L+ M
Sbjct: 64 KRNLFLWNVMIRG-----YAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAM 118
Query: 349 ERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAY 408
E GK++H IR G +SDV +G AL+DMYAKCG ++ AR + +I D+V N+ML Y
Sbjct: 119 EEGKKIHKDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATY 178
Query: 409 AMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSL 468
+ +G E +A R + +G +P +F+ +++A G + G E + + +
Sbjct: 179 SQNGQPDESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESND 238
Query: 469 KHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
K T ++D+ +++G + A + + V W A++ G HG+
Sbjct: 239 KVKTALMDMYAKSGSVNVARSLFELLE-EKRVVSWNAMITGYAMHGH 284
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 111/417 (26%), Positives = 191/417 (45%), Gaps = 48/417 (11%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
NL W+ +I G+ NG E AI + ++M+ GL P+ T VL AC+ L + GK+ H
Sbjct: 66 NLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKKIH 125
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
+ R+G S+ FV L+D+Y +CG + SA ++F K ++ V N+++ Y +NG
Sbjct: 126 KDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNGQP- 184
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
DE+ ++ R ++ +G++PT TF
Sbjct: 185 ----------------------------------DESLALCR-VMAFNGLKPTEGTFVIS 209
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
+ A AD L +GKE+H + G +S+ V AL++MY + + A+ F+ +E
Sbjct: 210 IAASADNGLLPQGKELHGYSWRHGFESNDKVKTALMDMYAKSGSVNVARSLFELLEEKRV 269
Query: 298 LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAY 357
+ G+ + + A+ LF EM + PD T +L+ACS + GK +H
Sbjct: 270 VSWNAMITGYAMHGHANEALDLFKEMKG-KVLPDHITFVGVLAACSHGGLLNEGK-MHFR 327
Query: 358 AIRCGYD--SDVHIGTALVDMYAKCGSLKHA-RLAYKRISTPDLVSQNAMLTAYAMHGHG 414
++ ++ V T ++D+ CG L+ A +L + PD A+L + +HG+
Sbjct: 328 SMISDFNIWPTVQHYTCMIDLLGHCGRLEEAYKLIMEMRVEPDAGVWGALLHSCKIHGNV 387
Query: 415 KEGIAHFRRILASGFRPD---HISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSL 468
+ G +++ PD + LS + A AG + DLM +K S+
Sbjct: 388 EMGELALEKLVE--LEPDDGGNYVILSNMYA--QAGKWDGVARLRDLMMNKGLKKSI 440
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 131/296 (44%), Gaps = 40/296 (13%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG ++ A++VF + ERD V WN
Sbjct: 146 MYAKCGCVESARQVFDKIDERDVVCWN--------------------------------- 172
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+++ ++QNG +E++ + M GL+P T + A A L GKE HGY
Sbjct: 173 ---SMLATYSQNGQPDESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYS 229
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R+GF SN V L+D+Y + G + A +F K VS N +I GY +G+ EA
Sbjct: 230 WRHGFESNDKVKTALMDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHANEAL 289
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+LF +M+ V I++ +++ L +E FR ++ I PT + ++
Sbjct: 290 DLFKEMKG-KVLPDHITFVGVLAACSHGGLLNEGKMHFRSMISDFNIWPTVQHYTCMIDL 348
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
L +E + L + + ++ D V GAL+ + ++ ++A +++ +E
Sbjct: 349 LGHCGRL---EEAYKLIMEMRVEPDAGVWGALLHSCKIHGNVEMGELALEKLVELE 401
>gi|15223594|ref|NP_176062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173061|sp|Q9FXB9.1|PPR84_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g56690, mitochondrial; Flags: Precursor
gi|9954744|gb|AAG09095.1|AC009323_6 Hypothetical protein [Arabidopsis thaliana]
gi|332195302|gb|AEE33423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 704
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 181/602 (30%), Positives = 317/602 (52%), Gaps = 59/602 (9%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y G +A+++F M ER+ VSWN +V+ N +++EA E M N+VS
Sbjct: 58 YFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPE-----RNVVS 112
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W+A++ G+ Q G EA + +RM ++S F G I
Sbjct: 113 WTAMVKGYMQEGMVGEAESLFWRMPER-------------------NEVSWTVMFGGLID 153
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
+G +D R+ DM+ +K+ V+ +I G C G V EAR
Sbjct: 154 -----------DGRIDKARKLYDMMP---------VKDVVASTNMIGGLCREGRVDEARL 193
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
+FD+M +R +++W +MI+GY N+ D A +F + + + TS G L
Sbjct: 194 IFDEMR----ERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTL--S 247
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK 301
+ + E+ + + A++ + ++ A+ FD +E+ +N +
Sbjct: 248 GRIEDAEEFFEVMPMKPVIACN-------AMIVGFGEVGEISKARRVFDLMEDRDNATWR 300
Query: 302 MKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRC 361
+E + A+ LF++M + P ++ ILS C++LA+++ G+QVHA+ +RC
Sbjct: 301 GMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRC 360
Query: 362 GYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHF 421
+D DV++ + L+ MY KCG L A+L + R S+ D++ N++++ YA HG G+E + F
Sbjct: 361 QFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIF 420
Query: 422 RRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMVDLLSR 480
+ +SG P+ ++ ++ L+AC +AG ++ G E F+ M + + V P+++HY+C VD+L R
Sbjct: 421 HEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGR 480
Query: 481 AGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVML 540
AG++ +A E I+ + + PD+ +WGALLG C +H L+ ++AA +L E EP+N G YV+L
Sbjct: 481 AGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLL 540
Query: 541 ANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKF-RASDRSHDRSEEIYTI 599
+++ A +W D+A R+ M+ + K PGCSWIE ++H F R ++H I +
Sbjct: 541 SSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMM 600
Query: 600 ID 601
++
Sbjct: 601 LE 602
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 90/464 (19%), Positives = 170/464 (36%), Gaps = 109/464 (23%)
Query: 161 VSCNTIIVGYCENGNVAEARELFDQMEHLGV---------------------------QR 193
V+C+ I G + EAR+ FD ++ + +R
Sbjct: 18 VNCSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSER 77
Query: 194 GIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFG------------------ 235
++SWN ++SGY+ N + EA ++F + R+ + T+ G
Sbjct: 78 NVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMP 137
Query: 236 -------SVLI-ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQM 287
+V+ D + K ++++ + + + T + G L CR + A++
Sbjct: 138 ERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGL----CREGRVDEARL 193
Query: 288 AFDEIENIENLLGKMKEDGFEPNVYTWNAMQL-FSEMLSLDLTPDIYTVGIILSACSSLA 346
FDE+ E NV TW M + + +D+ ++ V
Sbjct: 194 IFDEMR--------------ERNVVTWTTMITGYRQNNRVDVARKLFEV----------- 228
Query: 347 TMERGKQVHAYAIRCGYDSDVHIG-----------------TALVDMYAKCGSLKHARLA 389
M +V ++ GY I A++ + + G + AR
Sbjct: 229 -MPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRV 287
Query: 390 YKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSI 449
+ + D + M+ AY G E + F ++ G RP S +S LS C S+
Sbjct: 288 FDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASL 347
Query: 450 KTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
+ G + + + + ++ + + GEL +A + + D +MW +++ G
Sbjct: 348 QYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFS-SKDIIMWNSIISG 406
Query: 510 CVSHGNLEFGQIAADRLIELEPNNT-GNYVMLANLF---AYAGR 549
SHG G+ A E+ + T N V L + +YAG+
Sbjct: 407 YASHG---LGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGK 447
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 81/192 (42%), Gaps = 44/192 (22%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG L AK VF +D + WNS+++ A++GL EAL+ M S
Sbjct: 375 MYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPS--------- 425
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
G PN TL ++L AC+ KL G E +
Sbjct: 426 ---------------------------SGTMPNKVTLIAILTACSYAGKLEEGLEIFESM 458
Query: 121 TRNGFMSNPFV--VNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG---N 175
+ F P V + VD+ R G + A+++ +IK + + ++G C+ +
Sbjct: 459 -ESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLD 517
Query: 176 VAE--ARELFDQ 185
+AE A++LF+
Sbjct: 518 LAEVAAKKLFEN 529
>gi|297740651|emb|CBI30833.3| unnamed protein product [Vitis vinifera]
Length = 709
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 175/561 (31%), Positives = 289/561 (51%), Gaps = 74/561 (13%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
N+ +++A+I GF NG+ EE +M+ EG+ P+ T + AC + ++ K+ H
Sbjct: 103 NVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKACLDVLEI---KKIH 159
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
G + + G + F+ + LV+ Y + G M A F + I
Sbjct: 160 GLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPI-------------------- 199
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
R ++ WN+M++GY ++ FR + + + P+ FT V
Sbjct: 200 ---------------RDVVLWNAMVNGYAQIGQFEMVLETFRRM-NDESVVPSRFTVTGV 243
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
L A M L G+ IH A+ +G S V +L++MY + + IE+
Sbjct: 244 LSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKC----------IEDALE 293
Query: 298 LLGKMKEDGFEPNVYTWNA--------------MQLFSEMLSLDLTPDIYTVGIILSACS 343
+ M+E ++++WN+ ++L ML + PD+ TV +L ACS
Sbjct: 294 IFEMMREK----DIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACS 349
Query: 344 SLATMERGKQVHAYAIRCGYDSD------VHIGTALVDMYAKCGSLKHARLAYKRISTPD 397
LA + G+++H Y I G D V + A++DMYAKCGS++ A L ++R+S D
Sbjct: 350 HLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKD 409
Query: 398 LVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFD 457
+ S N M+ Y MHG+G E + F R+ +PD ++F+ LSAC HAG + G F
Sbjct: 410 VASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLV 469
Query: 458 LM-AYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNL 516
M + YDV P+++HYTC++D+L RAG+L EAYE +P+ + V+W ALL C H +
Sbjct: 470 QMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALLAACRLHKHA 529
Query: 517 EFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIED 576
++AA R+ ELEP + G+YV+++N++ GR+ ++ R M+ + + K+PGCSWIE
Sbjct: 530 VLAEVAAQRVFELEPEHCGSYVLMSNVYGAVGRYEEVLEVRHTMRQQNVRKTPGCSWIEL 589
Query: 577 RDEIHKFRASDRSHDRSEEIY 597
++ +H F ++DR+H + IY
Sbjct: 590 KNGVHVFVSADRAHPEAHSIY 610
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 120/483 (24%), Positives = 219/483 (45%), Gaps = 56/483 (11%)
Query: 93 NARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIF 152
N T + L A A + LS GKE H Y+ NGF+++P + L+++Y +C M AL IF
Sbjct: 36 NLTTCIASLQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSLINMYSKCNQMNFALSIF 95
Query: 153 SKFSIK-NEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLY 211
S + + N + N II G+ NG E E + +M +
Sbjct: 96 SDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRN----------------------- 132
Query: 212 DEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGA 271
+G+ P FTF + AC D+ ++K IH L GL+ D F+G A
Sbjct: 133 -------------EGVIPDKFTFPCAIKACLDVLEIKK---IHGLLFKFGLELDVFIGSA 176
Query: 272 LVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPD 331
LV Y ++ + AQ+AF+E+ + +L +G+ ++ F M + P
Sbjct: 177 LVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPS 236
Query: 332 IYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYK 391
+TV +LS + + + G+ +H +A++ GYDS V + +L+DMY KC ++ A ++
Sbjct: 237 RFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFE 296
Query: 392 RISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKT 451
+ D+ S N++++ + G + R+L +G +PD ++ + L AC H ++
Sbjct: 297 MMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMH 356
Query: 452 GSEFFDLMAYYDVKPSLKHY------TCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGA 505
G E M + K ++D+ ++ G + +A+ +++ D W
Sbjct: 357 GREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMS-NKDVASWNI 415
Query: 506 LLGGCVSHGNLEFGQIAADRL-----IELEPNNTGNYVMLANLFAYAGRWSDLARTRQKM 560
++ G HG +G A + ++L+P+ +V + + ++AG S +M
Sbjct: 416 MIMGYGMHG---YGNEALEMFSRMCEVQLKPDEV-TFVGVLSACSHAGFVSQGRNFLVQM 471
Query: 561 KDR 563
K +
Sbjct: 472 KSK 474
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 113/442 (25%), Positives = 187/442 (42%), Gaps = 57/442 (12%)
Query: 5 CGSLDDAKKV----FKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
C + + KK+ FK E D +++V GL+ A E + D +V
Sbjct: 149 CLDVLEIKKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRD-----VV 203
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
W+A++ G+ Q G E + RM E + P+ T++ VL A + L+ G+ HG+
Sbjct: 204 LWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFA 263
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G+ S V N L+D+Y +C + AL+IF K+ S N+I+ + + G+
Sbjct: 264 MKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTL 323
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
L D+M LG GI+P T +VL A
Sbjct: 324 RLLDRM--LGA----------------------------------GIQPDLVTVTTVLPA 347
Query: 241 CADMNSLRKGKEIHALAIALGLQS------DTFVGGALVEMYCRYQDLVAAQMAFDEIEN 294
C+ + +L G+EIH I GL D + A+++MY + + A + F+ + N
Sbjct: 348 CSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSN 407
Query: 295 IENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV 354
+ + G+ + Y A+++FS M + L PD T +LSACS + +G+
Sbjct: 408 KDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNF 467
Query: 355 HAYAIRCGYDSDVHIG--TALVDMYAKCGSLKHA-RLAYKRISTPDLVSQNAMLTAYAMH 411
++ YD I T ++DM + G L A LA + V A+L A +H
Sbjct: 468 -LVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALLAACRLH 526
Query: 412 GHGKEGIAHFRRILASGFRPDH 433
H +R+ P+H
Sbjct: 527 KHAVLAEVAAQRVFE--LEPEH 546
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 143/304 (47%), Gaps = 49/304 (16%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKC ++DA ++F+MM E+D +
Sbjct: 281 MYGKCKCIEDALEIFEMMREKD------------------------------------IF 304
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW++++ Q G + + +L RM G++P+ T+++VLPAC+ L L G+E HGY+
Sbjct: 305 SWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYM 364
Query: 121 TRNGF------MSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
+G + + + N ++D+Y +CG M A +F + S K+ S N +I+GY +G
Sbjct: 365 IVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMGYGMHG 424
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTF 234
EA E+F +M + ++ +++ ++S + + + + + PT +
Sbjct: 425 YGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQMKSKYDVAPTIEHY 484
Query: 235 GSVLIACADMNSLRKGK--EIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI 292
V+ DM R G+ E + LA+ + ++++ V AL+ ++ V A++A +
Sbjct: 485 TCVI----DMLG-RAGQLDEAYELALTMPIEANPVVWRALLAACRLHKHAVLAEVAAQRV 539
Query: 293 ENIE 296
+E
Sbjct: 540 FELE 543
>gi|240255401|ref|NP_189042.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332643322|gb|AEE76843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 665
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 181/521 (34%), Positives = 275/521 (52%), Gaps = 41/521 (7%)
Query: 81 MLFRMQAEGLE-----PNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGL 135
+L R + LE + R +++L C + L G+ H +I ++ F + + N L
Sbjct: 42 LLLRTSSNDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTL 101
Query: 136 VDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGI 195
+++Y +CG + EAR++F++M QR
Sbjct: 102 LNMYAKCGSL-------------------------------EEARKVFEKMP----QRDF 126
Query: 196 ISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHA 255
++W ++ISGY + +A F +L R G P FT SV+ A A G ++H
Sbjct: 127 VTWTTLISGYSQHDRPCDALLFFNQML-RFGYSPNEFTLSSVIKAAAAERRGCCGHQLHG 185
Query: 256 LAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWN 315
+ G S+ VG AL+++Y RY + AQ+ FD +E+ ++ G T
Sbjct: 186 FCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEK 245
Query: 316 AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVD 375
A++LF ML P ++ + ACSS +E+GK VHAY I+ G G L+D
Sbjct: 246 ALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLD 305
Query: 376 MYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHIS 435
MYAK GS+ AR + R++ D+VS N++LTAYA HG GKE + F + G RP+ IS
Sbjct: 306 MYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEIS 365
Query: 436 FLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIP 495
FLS L+AC H+G + G +++LM + P HY +VDLL RAG+L A FI+++P
Sbjct: 366 FLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMP 425
Query: 496 MAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLAR 555
+ P + +W ALL C H N E G AA+ + EL+P++ G +V+L N++A GRW+D AR
Sbjct: 426 IEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAAR 485
Query: 556 TRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEI 596
R+KMK+ + K P CSW+E + IH F A+D H + EEI
Sbjct: 486 VRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEI 526
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 110/423 (26%), Positives = 176/423 (41%), Gaps = 83/423 (19%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGSL++A+KVF+ MP+RD V
Sbjct: 104 MYAKCGSLEEARKVFEKMPQRD------------------------------------FV 127
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+ +I G++Q+ +A+ +M G PN TLSSV+ A A ++ G + HG+
Sbjct: 128 TWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFC 187
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ GF SN V + L+D+Y R G M A +F +N+VS N +I G+ +A
Sbjct: 188 VKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKAL 247
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
ELF M +RDG P+ F++ S+ A
Sbjct: 248 ELFQGM------------------------------------LRDGFRPSHFSYASLFGA 271
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFD-----EIENI 295
C+ L +GK +HA I G + F G L++MY + + A+ FD ++ +
Sbjct: 272 CSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSW 331
Query: 296 ENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVH 355
+LL + GF W F EM + + P+ + +L+ACS ++ G +
Sbjct: 332 NSLLTAYAQHGFGKEAVWW-----FEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYY 386
Query: 356 AYAIRCGYDSDVHIGTALVDMYAKCGSLKHA-RLAYKRISTPDLVSQNAMLTAYAMHGHG 414
+ G + +VD+ + G L A R + P A+L A MH +
Sbjct: 387 ELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNT 446
Query: 415 KEG 417
+ G
Sbjct: 447 ELG 449
>gi|356544234|ref|XP_003540559.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Glycine max]
Length = 916
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 191/600 (31%), Positives = 305/600 (50%), Gaps = 77/600 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G+L +A K F+ M RD +SWN
Sbjct: 362 MYAKAGALKEAGKHFEHMTYRDHISWN--------------------------------- 388
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
A+I G+ Q + A + RM +G+ P+ +L+S+L AC ++ L G++FH
Sbjct: 389 ---AIIVGYVQEEVEAGAFSLFRRMILDGIVPDEVSLASILSACGNIKVLEAGQQFHCLS 445
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G +N F + L+D+Y +CGD+ A K +S ++ VS N +I GY N E+
Sbjct: 446 VKLGLETNLFAGSSLIDMYSKCGDIKDAHKTYSSMPERSVVSVNALIAGYALK-NTKESI 504
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
L +M+ LG ++P+ TF S++
Sbjct: 505 NLLHEMQILG------------------------------------LKPSEITFASLIDV 528
Query: 241 CADMNSLRKGKEIHALAIALGLQSDT-FVGGALVEMYCRYQDLVAAQMAFDEIENIENL- 298
C + G +IH + GL + F+G +L+ MY Q L A + F E +++++
Sbjct: 529 CKGSAKVILGLQIHCAIVKRGLLCGSEFLGTSLLGMYMDSQRLADANILFSEFSSLKSIV 588
Query: 299 LGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYA 358
+ G N + A+ L+ EM +++PD T +L AC+ L+++ G+++H+
Sbjct: 589 MWTALISGHIQNECSDVALNLYREMRDNNISPDQATFVTVLQACALLSSLHDGREIHSLI 648
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST-PDLVSQNAMLTAYAMHGHGKEG 417
G+D D +ALVDMYAKCG +K + ++ ++T D++S N+M+ +A +G+ K
Sbjct: 649 FHTGFDLDELTSSALVDMYAKCGDVKSSVQVFEELATKKDVISWNSMIVGFAKNGYAKCA 708
Query: 418 IAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVD 476
+ F + S PD ++FL L+AC HAG + G + FD+M YY ++P + HY CMVD
Sbjct: 709 LKVFDEMTQSCITPDDVTFLGVLTACSHAGWVYEGRQIFDVMVNYYGIEPRVDHYACMVD 768
Query: 477 LLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGN 536
LL R G L EA EFI K+ + P++++W LLG C HG+ + GQ AA +LIELEP ++
Sbjct: 769 LLGRWGFLKEAEEFIDKLEVEPNAMIWANLLGACRIHGDEKRGQRAAKKLIELEPQSSSP 828
Query: 537 YVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEI 596
YV+L+N++A +G W + R+ M + + K PGCSWI E + F A D SH +EI
Sbjct: 829 YVLLSNMYAASGNWDEARSLRRTMIKKDIQKIPGCSWIVVGQETNLFVAGDISHSSYDEI 888
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 135/473 (28%), Positives = 228/473 (48%), Gaps = 46/473 (9%)
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W+ + G T++ E + G P+ T + L ACA+LQ L LG+ H +
Sbjct: 16 WNWRVQG-TKHYSSERVLQFYASFMNSGHSPDQFTFAVTLSACAKLQNLHLGRAVHSCVI 74
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSK--FSIKNEVSCNTIIVGYCENGNVAEA 179
++G S F L+ +Y +C + A IF+ F + VS +I GY + G EA
Sbjct: 75 KSGLESTSFCQGALIHLYAKCNSLTCARTIFASAPFPHLHTVSWTALISGYVQAGLPHEA 134
Query: 180 RELFDQMEHLGVQ--------------------------------RGIISWNSMISGYVD 207
+FD+M + V R +++WN MISG+
Sbjct: 135 LHIFDKMRNSAVPDQVALVTVLNAYISLGKLDDACQLFQQMPIPIRNVVAWNVMISGHAK 194
Query: 208 NSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTF 267
+ Y+EA + F + + G++ + T SVL A A + +L G +HA AI G +S +
Sbjct: 195 TAHYEEALAFFHQM-SKHGVKSSRSTLASVLSAIASLAALNHGLLVHAHAIKQGFESSIY 253
Query: 268 VGGALVEMYCRYQDLVAAQMAFDEIEN-----IENLLGKMKEDGFEPNVYTWNAMQLFSE 322
V +L+ MY + Q A+ FD I +LG ++GF NV M+LF +
Sbjct: 254 VASSLINMYGKCQMPDDARQVFDAISQKNMIVWNAMLGVYSQNGFLSNV-----MELFLD 308
Query: 323 MLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGS 382
M+S + PD +T ILS C+ +E G+Q+H+ I+ + S++ + AL+DMYAK G+
Sbjct: 309 MISCGIHPDEFTYTSILSTCACFEYLEVGRQLHSAIIKKRFTSNLFVNNALIDMYAKAGA 368
Query: 383 LKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSA 442
LK A ++ ++ D +S NA++ Y + FRR++ G PD +S S LSA
Sbjct: 369 LKEAGKHFEHMTYRDHISWNAIIVGYVQEEVEAGAFSLFRRMILDGIVPDEVSLASILSA 428
Query: 443 CVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIP 495
C + ++ G +F L ++ +L + ++D+ S+ G++ +A++ +P
Sbjct: 429 CGNIKVLEAGQQFHCLSVKLGLETNLFAGSSLIDMYSKCGDIKDAHKTYSSMP 481
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 147/581 (25%), Positives = 247/581 (42%), Gaps = 102/581 (17%)
Query: 1 MYGKCGSLDDAKKVFKM--MPERDCVSWNSVVTACAANGLVLEALECLERMSS------- 51
+Y KC SL A+ +F P VSW ++++ GL EAL ++M +
Sbjct: 91 LYAKCNSLTCARTIFASAPFPHLHTVSWTALISGYVQAGLPHEALHIFDKMRNSAVPDQV 150
Query: 52 --------------------LDNETP----NLVSWSAVIGGFTQNGYDEEAIGMLFRMQA 87
L + P N+V+W+ +I G + + EEA+ +M
Sbjct: 151 ALVTVLNAYISLGKLDDACQLFQQMPIPIRNVVAWNVMISGHAKTAHYEEALAFFHQMSK 210
Query: 88 EGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLS 147
G++ + TL+SVL A A L L+ G H + + GF S+ +V + L+++Y +C
Sbjct: 211 HGVKSSRSTLASVLSAIASLAALNHGLLVHAHAIKQGFESSIYVASSLINMYGKCQMPDD 270
Query: 148 ALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVD 207
A ++F S KN + N ++ Y +NG ++ ELF M
Sbjct: 271 ARQVFDAISQKNMIVWNAMLGVYSQNGFLSNVMELFLDM--------------------- 309
Query: 208 NSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTF 267
+ GI P FT+ S+L CA L G+++H+ I S+ F
Sbjct: 310 ---------------ISCGIHPDEFTYTSILSTCACFEYLEVGRQLHSAIIKKRFTSNLF 354
Query: 268 VGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLD 327
V AL++MY + L A F+ + +++ G+ A LF M+
Sbjct: 355 VNNALIDMYAKAGALKEAGKHFEHMTYRDHISWNAIIVGYVQEEVEAGAFSLFRRMILDG 414
Query: 328 LTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHAR 387
+ PD ++ ILSAC ++ +E G+Q H +++ G ++++ G++L+DMY+KCG +K A
Sbjct: 415 IVPDEVSLASILSACGNIKVLEAGQQFHCLSVKLGLETNLFAGSSLIDMYSKCGDIKDAH 474
Query: 388 LAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSAC---- 443
Y + +VS NA++ YA+ + KE I + G +P I+F S + C
Sbjct: 475 KTYSSMPERSVVSVNALIAGYALK-NTKESINLLHEMQILGLKPSEITFASLIDVCKGSA 533
Query: 444 -------VHAGSIK----TGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIK 492
+H +K GSEF T ++ + + L +A
Sbjct: 534 KVILGLQIHCAIVKRGLLCGSEFLG--------------TSLLGMYMDSQRLADANILFS 579
Query: 493 KIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNN 533
+ VMW AL+ G H E +A + E+ NN
Sbjct: 580 EFSSLKSIVMWTALISG---HIQNECSDVALNLYREMRDNN 617
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 122/519 (23%), Positives = 229/519 (44%), Gaps = 81/519 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKC DDA++VF + ++ N++
Sbjct: 261 MYGKCQMPDDARQVFDAISQK------------------------------------NMI 284
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
W+A++G ++QNG+ + + M + G+ P+ T +S+L CA + L +G++ H I
Sbjct: 285 VWNAMLGVYSQNGFLSNVMELFLDMISCGIHPDEFTYTSILSTCACFEYLEVGRQLHSAI 344
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ F SN FV N L+D+Y + G + A K F + ++ +S N IIVGY +
Sbjct: 345 IKKRFTSNLFVNNALIDMYAKAGALKEAGKHFEHMTYRDHISWNAIIVGYVQE------- 397
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
V+ G AFS+FR +++ DGI P + S+L A
Sbjct: 398 ---------EVEAG-------------------AFSLFRRMIL-DGIVPDEVSLASILSA 428
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C ++ L G++ H L++ LGL+++ F G +L++MY + D+ A + + +
Sbjct: 429 CGNIKVLEAGQQFHCLSVKLGLETNLFAGSSLIDMYSKCGDIKDAHKTYSSMPERSVVSV 488
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G+ T ++ L EM L L P T ++ C A + G Q+H ++
Sbjct: 489 NALIAGYALK-NTKESINLLHEMQILGLKPSEITFASLIDVCKGSAKVILGLQIHCAIVK 547
Query: 361 ----CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST-PDLVSQNAMLTAYAMHGHGK 415
CG + +GT+L+ MY L A + + S+ +V A+++ + +
Sbjct: 548 RGLLCGSE---FLGTSLLGMYMDSQRLADANILFSEFSSLKSIVMWTALISGHIQNECSD 604
Query: 416 EGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMV 475
+ +R + + PD +F++ L AC S+ G E L+ + + +V
Sbjct: 605 VALNLYREMRDNNISPDQATFVTVLQACALLSSLHDGREIHSLIFHTGFDLDELTSSALV 664
Query: 476 DLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
D+ ++ G++ + + +++ D + W +++ G +G
Sbjct: 665 DMYAKCGDVKSSVQVFEELATKKDVISWNSMIVGFAKNG 703
>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 763
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 187/593 (31%), Positives = 315/593 (53%), Gaps = 29/593 (4%)
Query: 11 AKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFT 70
A+ +F MPERD SWN ++T N + EA + + M D +VSW+A++ G+
Sbjct: 96 ARDLFDKMPERDLFSWNVMLTGYVRNRRLGEAHKLFDLMPKKD-----VVSWNAMLSGYA 150
Query: 71 QNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPF 130
QNG+ +EA + +M N+ + + +L A +L + + +S
Sbjct: 151 QNGFVDEAREVFNKMPHR----NSISWNGLLAAYVHNGRLKEARRLFESQSNWELIS--- 203
Query: 131 VVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLG 190
N L+ Y + + A ++F + +++ +S NT+I GY + G++++A+ LF++
Sbjct: 204 -WNCLMGGYVKRNMLGDARQLFDRMPVRDVISWNTMISGYAQVGDLSQAKRLFNE----S 258
Query: 191 VQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKG 250
R + +W +M+SGYV N + DEA F ++ +++ I ++ ++L +
Sbjct: 259 PIRDVFTWTAMVSGYVQNGMVDEARKYFDEMPVKNEI-----SYNAMLAGYVQYKKMVIA 313
Query: 251 KEIHALAIALGLQS-DTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEP 309
E+ + S +T + G Y + + A+ FD + + + G+
Sbjct: 314 GELFEAMPCRNISSWNTMITG-----YGQNGGIAQARKLFDMMPQRDCVSWAAIISGYAQ 368
Query: 310 NVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHI 369
N + A+ +F EM + + T LS C+ +A +E GKQVH ++ G+++ +
Sbjct: 369 NGHYEEALNMFVEMKRDGESSNRSTFSCALSTCADIAALELGKQVHGQVVKAGFETGCFV 428
Query: 370 GTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGF 429
G AL+ MY KCGS A ++ I D+VS N M+ YA HG G++ + F + +G
Sbjct: 429 GNALLGMYFKCGSTDEANDVFEGIEEKDVVSWNTMIAGYARHGFGRQALVLFESMKKAGV 488
Query: 430 RPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAY 488
+PD I+ + LSAC H+G I G+E+F M Y+VKP+ KHYTCM+DLL RAG L EA
Sbjct: 489 KPDEITMVGVLSACSHSGLIDRGTEYFYSMDRDYNVKPTSKHYTCMIDLLGRAGRLEEAE 548
Query: 489 EFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAG 548
++ +P P + WGALLG HGN E G+ AA+ + ++EP N+G YV+L+NL+A +G
Sbjct: 549 NLMRNMPFDPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASG 608
Query: 549 RWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
RW D+ + R KM++ + K G SW+E +++IH F D H + IY ++
Sbjct: 609 RWVDVGKMRSKMREAGVQKVTGYSWVEVQNKIHTFSVGDCFHPEKDRIYAFLE 661
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 131/447 (29%), Positives = 219/447 (48%), Gaps = 47/447 (10%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y + G +D+A++VF MP R+ +SWN ++ A NG + EA E S+ + L+S
Sbjct: 149 YAQNGFVDEAREVFNKMPHRNSISWNGLLAAYVHNGRLKEARRLFESQSNWE-----LIS 203
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKE-FHGYI 120
W+ ++GG+ + +A + RM + + ++++ A++ LS K F+
Sbjct: 204 WNCLMGGYVKRNMLGDARQLFDRMPVR----DVISWNTMISGYAQVGDLSQAKRLFNESP 259
Query: 121 TRNGF----MSNPFVVNGLVDVYRRCGD----------------------MLSALKIFSK 154
R+ F M + +V NG+VD R+ D M+ A ++F
Sbjct: 260 IRDVFTWTAMVSGYVQNGMVDEARKYFDEMPVKNEISYNAMLAGYVQYKKMVIAGELFEA 319
Query: 155 FSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEA 214
+N S NT+I GY +NG +A+AR+LFD M QR +SW ++ISGY N Y+EA
Sbjct: 320 MPCRNISSWNTMITGYGQNGGIAQARKLFDMMP----QRDCVSWAAIISGYAQNGHYEEA 375
Query: 215 FSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVE 274
+MF + + RDG TF L CAD+ +L GK++H + G ++ FVG AL+
Sbjct: 376 LNMFVE-MKRDGESSNRSTFSCALSTCADIAALELGKQVHGQVVKAGFETGCFVGNALLG 434
Query: 275 MYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYT 334
MY + A F+ IE + + G+ + + A+ LF M + PD T
Sbjct: 435 MYFKCGSTDEANDVFEGIEEKDVVSWNTMIAGYARHGFGRQALVLFESMKKAGVKPDEIT 494
Query: 335 VGIILSACSSLATMERGKQVHAYAIRCGYD---SDVHIGTALVDMYAKCGSLKHARLAYK 391
+ +LSACS ++RG + + Y++ Y+ + H T ++D+ + G L+ A +
Sbjct: 495 MVGVLSACSHSGLIDRGTE-YFYSMDRDYNVKPTSKHY-TCMIDLLGRAGRLEEAENLMR 552
Query: 392 RIS-TPDLVSQNAMLTAYAMHGHGKEG 417
+ P S A+L A +HG+ + G
Sbjct: 553 NMPFDPGAASWGALLGASRIHGNTELG 579
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 108/475 (22%), Positives = 199/475 (41%), Gaps = 37/475 (7%)
Query: 50 SSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQK 109
SS+ + P++V+W+ I +NG+ + A+ + M ++ + ++++ R K
Sbjct: 37 SSVKFKDPDIVTWNKAISSHMRNGHCDSALRVFNSMPRR----SSVSYNAMISGYLRNAK 92
Query: 110 LSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVG 169
SL ++ + S ++ G V RR G+ A K+F K+ VS N ++ G
Sbjct: 93 FSLARDLFDKMPERDLFSWNVMLTGYVR-NRRLGE---AHKLFDLMPKKDVVSWNAMLSG 148
Query: 170 YCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEP 229
Y +NG V EARE+F++M H R ISWN +++ YV N EA +F + I
Sbjct: 149 YAQNGFVDEAREVFNKMPH----RNSISWNGLLAAYVHNGRLKEARRLFESQSNWELISW 204
Query: 230 TSFTFGSVLIACADMNSLRKGKEIH-ALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMA 288
G V N L +++ + + + +T + G Y + DL A+
Sbjct: 205 NCLMGGYV-----KRNMLGDARQLFDRMPVRDVISWNTMISG-----YAQVGDLSQAKRL 254
Query: 289 FDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEM-LSLDLTPDIYTVGIILSACSSLAT 347
F+E + G+ N A + F EM + +++ + G + +A
Sbjct: 255 FNESPIRDVFTWTAMVSGYVQNGMVDEARKYFDEMPVKNEISYNAMLAGYVQYKKMVIA- 313
Query: 348 MERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTA 407
G+ A R ++ ++ Y + G + AR + + D VS A+++
Sbjct: 314 ---GELFEAMPCR-----NISSWNTMITGYGQNGGIAQARKLFDMMPQRDCVSWAAIISG 365
Query: 408 YAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPS 467
YA +GH +E + F + G + +F ALS C +++ G + + +
Sbjct: 366 YAQNGHYEEALNMFVEMKRDGESSNRSTFSCALSTCADIAALELGKQVHGQVVKAGFETG 425
Query: 468 LKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIA 522
++ + + G EA + + I D V W ++ G HG FG+ A
Sbjct: 426 CFVGNALLGMYFKCGSTDEANDVFEGIE-EKDVVSWNTMIAGYARHG---FGRQA 476
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 56/111 (50%), Gaps = 2/111 (1%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGS D+A VF+ + E+D VSWN+++ A +G +AL E M + P+ +
Sbjct: 435 MYFKCGSTDEANDVFEGIEEKDVVSWNTMIAGYARHGFGRQALVLFESMKKAGVK-PDEI 493
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKL 110
+ V+ + +G + + M + ++P ++ + ++ R +L
Sbjct: 494 TMVGVLSACSHSGLIDRGTEYFYSMDRDYNVKPTSKHYTCMIDLLGRAGRL 544
>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
Length = 1725
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 177/553 (32%), Positives = 296/553 (53%), Gaps = 44/553 (7%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
N+ SW++VI + G EA+ ++ GL P + + +C+ L L G+ H
Sbjct: 1106 NVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSH 1165
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
GF ++ FV + L+D+Y +CG +
Sbjct: 1166 QQAFVFGFETDLFVSSALIDMYSKCGQL-------------------------------K 1194
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLL-----MRDG--IEPT 230
+AR LFD++ R ++SW SMI+GYV N D A +F+D L + DG +
Sbjct: 1195 DARALFDEIP----LRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLD 1250
Query: 231 SFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFD 290
S SVL AC+ ++ + +H + G VG L++ Y + + ++ FD
Sbjct: 1251 SVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFD 1310
Query: 291 EIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLS-LDLTPDIYTVGIILSACSSLATME 349
+E +++ + + + A+++F M+ + + + T+ +L AC+ +
Sbjct: 1311 WMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALR 1370
Query: 350 RGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYA 409
GK +H I+ + +V +GT+++DMY KCG ++ A+ + R+ ++ S AM+ Y
Sbjct: 1371 AGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYG 1430
Query: 410 MHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSL 468
MHG KE + F +++ +G +P++I+F+S L+AC HAG ++ G +F+ M + YD++P +
Sbjct: 1431 MHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGI 1490
Query: 469 KHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIE 528
+HY CMVDL RAG L EAY IK++ M PD V+WG+LLG C H N++ G+IAA +L E
Sbjct: 1491 EHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFE 1550
Query: 529 LEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDR 588
L+P+N G YV+L+NL+A AGRW+D+ R R MK+R++ K PG S +E + +H F D+
Sbjct: 1551 LDPDNCGYYVLLSNLYADAGRWADVERMRMLMKNRQLVKPPGFSLVELKGRVHVFLVGDK 1610
Query: 589 SHDRSEEIYTIID 601
H E IY ++
Sbjct: 1611 EHPHHEMIYKYLE 1623
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 104/357 (29%), Positives = 180/357 (50%), Gaps = 37/357 (10%)
Query: 170 YCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEP 229
Y +G +A A LF Q+++ +WN +I N L ++A ++++++ + GI
Sbjct: 69 YSTHGRIAYAILLFYQIQNPCT----FTWNLIIRANTINGLSEQALMLYKNMVCQ-GIAA 123
Query: 230 TSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMY--CRYQ------- 280
FTF V+ AC + S+ GK +H I G D FV L++ Y C +
Sbjct: 124 DKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVF 183
Query: 281 ----------------------DLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQ 318
DL A+ FDEI + + +G+ N A++
Sbjct: 184 EKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALE 243
Query: 319 LFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYA 378
LF M + ++ P+ YT+ ++ AC+ + + G+ +H YAI+ + V++GTAL+DMY+
Sbjct: 244 LFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYS 303
Query: 379 KCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLS 438
KCGS+K A ++ + L + N+M+T+ +HG G+E + F + +PD I+F+
Sbjct: 304 KCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIG 363
Query: 439 ALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKI 494
L ACVH ++K G +F M +Y + P +HY CM +L +R+ L EA++ K++
Sbjct: 364 VLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEAFKSTKEV 420
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 171/349 (48%), Gaps = 44/349 (12%)
Query: 55 ETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGK 114
+ P +W+ +I T NG E+A+ + M +G+ + T V+ AC + LGK
Sbjct: 86 QNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGK 145
Query: 115 EFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
HG + + GF + FV N L+D Y +CG ALK+F K ++N VS T+I G G
Sbjct: 146 VVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCG 205
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTF 234
++ EAR +FD++ + ++SW +MI+GY+ N +EA +F+ + + I P +T
Sbjct: 206 DLQEARRIFDEIP----SKNVVSWTAMINGYIRNQQPEEALELFKR-MQAENIFPNEYTM 260
Query: 235 GSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIEN 294
S++ AC +M L G+ IH AI ++ ++G AL++MY + + D IE
Sbjct: 261 VSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIK------DAIEV 314
Query: 295 IENLLGKMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILS 340
E + K ++ TWN+M LFSEM +++ PD T +L
Sbjct: 315 FETMPRK--------SLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLC 366
Query: 341 ACSSLATMERGKQVHAYAIRCGYDSDV--HIGTALVDMYAKCGSLKHAR 387
AC + ++ G C Y + + H G A + + +C + +AR
Sbjct: 367 ACVHIKNVKEG---------CAYFTRMTQHYGIAPIPEHYECMTELYAR 406
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 116/441 (26%), Positives = 189/441 (42%), Gaps = 121/441 (27%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG L DA+ +F +P R N+V
Sbjct: 1186 MYSKCGQLKDARALFDEIPLR------------------------------------NVV 1209
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFR--MQAE-------GLEPNARTLSSVLPACARLQKLS 111
SW+++I G+ QN + A+ +LF+ ++ E + ++ + SVL AC+R+
Sbjct: 1210 SWTSMITGYVQNEQADNAL-LLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKG 1268
Query: 112 LGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYC 171
+ + HG++ + GF + V N L+D Y +CG L + K+F K+++S N++I Y
Sbjct: 1269 ITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYA 1328
Query: 172 ENGNVAEARELFDQM-EHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPT 230
++G EA E+F M H+GV+ +
Sbjct: 1329 QSGLSGEALEVFHGMVRHVGVRYNAV---------------------------------- 1354
Query: 231 SFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFD 290
T +VL+ACA +LR GK IH I + L+ + VG ++++MYC+ + A+ FD
Sbjct: 1355 --TLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFD 1412
Query: 291 EIENIENLLGKMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVG 336
+MKE NV +W AM +F +M+ + P+ T
Sbjct: 1413 ----------RMKEK----NVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFV 1458
Query: 337 IILSACSSLATMERG-----KQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYK 391
+L+ACS +E G H Y I G + H G +VD++ + G L A K
Sbjct: 1459 SVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIE---HYG-CMVDLFGRAGCLNEAYNLIK 1514
Query: 392 RIS-TPDLVSQNAMLTAYAMH 411
R+ PD V ++L A +H
Sbjct: 1515 RMKMKPDFVVWGSLLGACRIH 1535
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 131/261 (50%), Gaps = 9/261 (3%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
Y KCG A KVF+ M R+ VSW +V++ + G + EA + + S N+V
Sbjct: 169 FYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPS-----KNVV 223
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A+I G+ +N EEA+ + RMQAE + PN T+ S++ AC + L+LG+ H Y
Sbjct: 224 SWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYA 283
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+N ++ L+D+Y +CG + A+++F K+ + N++I +G EA
Sbjct: 284 IKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEAL 343
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LF +ME + V+ I++ ++ V E + F + GI P + +
Sbjct: 344 NLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTEL 403
Query: 241 CADMNSL----RKGKEIHALA 257
A N+L + KE+ +LA
Sbjct: 404 YARSNNLDEAFKSTKEVGSLA 424
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 128/270 (47%), Gaps = 15/270 (5%)
Query: 27 NSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRM- 85
N+++ A A G L + + + M D+ +SW+++I + Q+G EA+ + M
Sbjct: 1290 NTLMDAYAKCGQPLVSKKVFDWMEEKDD-----ISWNSMIAVYAQSGLSGEALEVFHGMV 1344
Query: 86 QAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDM 145
+ G+ NA TLS+VL ACA L GK H + + N V ++D+Y +CG +
Sbjct: 1345 RHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRV 1404
Query: 146 LSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGY 205
A K F + KN S ++ GY +G EA ++F +M GV+ I++ S+++
Sbjct: 1405 EMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAAC 1464
Query: 206 VDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSD 265
L +E + F + + IEP +G ++ L E + L + ++ D
Sbjct: 1465 SHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCL---NEAYNLIKRMKMKPD 1521
Query: 266 TFVGGALVEMYCRYQ---DL--VAAQMAFD 290
V G+L+ CR DL +AAQ F+
Sbjct: 1522 FVVWGSLLGA-CRIHKNVDLGEIAAQKLFE 1550
>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 805
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 187/600 (31%), Positives = 303/600 (50%), Gaps = 75/600 (12%)
Query: 4 KCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWS 63
K G + +A++VF MP +D V WN
Sbjct: 177 KFGKIGEAQRVFDGMPNKDVVCWN------------------------------------ 200
Query: 64 AVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRN 123
++IGG+ Q G + A + F M G++P+ T++S++ AC + L LGK HGY+
Sbjct: 201 SIIGGYVQAGCFDVAFQLFFEMHGSGIKPSPITMTSLIQACGGIGNLKLGKCMHGYVLGL 260
Query: 124 GFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELF 183
G ++ V+ VD+Y + GD+ SA +F K
Sbjct: 261 GLGNDILVLTSFVDMYSKMGDIESARWVFYKMP--------------------------- 293
Query: 184 DQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACAD 243
R ++SWN+MISG V N L E+F +F L+ G + T S+L C+
Sbjct: 294 --------TRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFDLT-TIVSLLQGCSQ 344
Query: 244 MNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMK 303
SL GK +H AI +S+ + A+V++Y + L A F+ +++ +
Sbjct: 345 TASLATGKILHGCAIR-SFESNLILSTAIVDLYSKCGSLKQATFVFNRMKDRNVITWTAM 403
Query: 304 EDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGY 363
G N + +A++LF++M + + T ++ +C+ L +++RG+ +H + R G+
Sbjct: 404 LVGLAQNGHAEDALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHLFRLGF 463
Query: 364 DSDVHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNAMLTAYAMHGHGKEGIAHFR 422
D+ TALVDMYAKCG + A + S + D+V N+M+T Y MHGHG + + +
Sbjct: 464 AFDIVNMTALVDMYAKCGKINLAERIFSHGSISKDVVLWNSMITGYGMHGHGYQAVGIYH 523
Query: 423 RILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRA 481
+++ G +P+ +FLS LSAC H+ ++ G F+ M ++++P KHY C+VDLLSRA
Sbjct: 524 KMIEEGLKPNQTTFLSLLSACSHSRLVEQGISLFNSMERDHNIRPIEKHYACLVDLLSRA 583
Query: 482 GELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLA 541
G EA I+K+P P + + ALL GC +H N+ G +D+L+ L+ N G Y+ML+
Sbjct: 584 GRFEEAQALIEKMPFQPGTAVLEALLSGCRTHKNINLGIQTSDKLLALDAMNPGIYIMLS 643
Query: 542 NLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
N++A A RW + R M++R + K+PG S +E + +H F A D SH EEIY ++
Sbjct: 644 NIYAEARRWDKVDYIRGLMRNRGLKKTPGYSLVETGNWVHTFFAGDNSHPNWEEIYHFLE 703
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 122/494 (24%), Positives = 223/494 (45%), Gaps = 67/494 (13%)
Query: 57 PNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEF 116
P + +A++ G+ Q+G E + + M++ LE ++ + + L ACA +G E
Sbjct: 93 PKGLLCNAMLCGYLQSGRYRETLELFGLMRSRNLEVDSCSCTFALKACASSLDYEMGMEI 152
Query: 117 HGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNV 176
G N FV + ++ + G + A ++F K+ V N+II GY + G
Sbjct: 153 ISSAVEKGMEKNRFVGSSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCF 212
Query: 177 AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGS 236
A +LF +M GI+P+ T S
Sbjct: 213 DVAFQLFFEMH------------------------------------GSGIKPSPITMTS 236
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
++ AC + +L+ GK +H + LGL +D V + V+MY + D+ +A+ F ++
Sbjct: 237 LIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLTSFVDMYSKMGDIESARWVFYKMPT-- 294
Query: 297 NLLGKMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSAC 342
N+ +WNAM LF ++ D+ T+ +L C
Sbjct: 295 ------------RNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFDLTTIVSLLQGC 342
Query: 343 SSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQN 402
S A++ GK +H AIR ++S++ + TA+VD+Y+KCGSLK A + R+ ++++
Sbjct: 343 SQTASLATGKILHGCAIR-SFESNLILSTAIVDLYSKCGSLKQATFVFNRMKDRNVITWT 401
Query: 403 AMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYY 462
AML A +GH ++ + F ++ G + ++F+S + +C H GS+K G +
Sbjct: 402 AMLVGLAQNGHAEDALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHLFRL 461
Query: 463 DVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIA 522
+ + T +VD+ ++ G++ A ++ D V+W +++ G HG+
Sbjct: 462 GFAFDIVNMTALVDMYAKCGKINLAERIFSHGSISKDVVLWNSMITGYGMHGHGYQAVGI 521
Query: 523 ADRLIE--LEPNNT 534
++IE L+PN T
Sbjct: 522 YHKMIEEGLKPNQT 535
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 104/398 (26%), Positives = 183/398 (45%), Gaps = 12/398 (3%)
Query: 125 FMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIV-----GYCENGNVAEA 179
F P +++ + + R L +K I N +S + + Y + ++ A
Sbjct: 24 FNQLPTIIHNFLSLLRESSKNLIWVKSTHAQIITNSLSTDQFVATKLVKAYSDLRSLEAA 83
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
R +FDQ +G++ N+M+ GY+ + Y E +F L+ +E S + L
Sbjct: 84 RYVFDQFFQ---PKGLLC-NAMLCGYLQSGRYRETLELF-GLMRSRNLEVDSCSCTFALK 138
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
ACA G EI + A+ G++ + FVG +++ ++ + AQ FD + N + +
Sbjct: 139 ACASSLDYEMGMEIISSAVEKGMEKNRFVGSSMISFLVKFGKIGEAQRVFDGMPNKDVVC 198
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
G+ A QLF EM + P T+ ++ AC + ++ GK +H Y +
Sbjct: 199 WNSIIGGYVQAGCFDVAFQLFFEMHGSGIKPSPITMTSLIQACGGIGNLKLGKCMHGYVL 258
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
G +D+ + T+ VDMY+K G ++ AR + ++ T +LVS NAM++ +G E
Sbjct: 259 GLGLGNDILVLTSFVDMYSKMGDIESARWVFYKMPTRNLVSWNAMISGCVRNGLVGESFD 318
Query: 420 HFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLS 479
F R++ S D + +S L C S+ TG + A + +L T +VDL S
Sbjct: 319 LFHRLVRSSGGFDLTTIVSLLQGCSQTASLATG-KILHGCAIRSFESNLILSTAIVDLYS 377
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
+ G L +A F+ + + W A+L G +G+ E
Sbjct: 378 KCGSLKQA-TFVFNRMKDRNVITWTAMLVGLAQNGHAE 414
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 109/429 (25%), Positives = 186/429 (43%), Gaps = 76/429 (17%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G ++ A+ VF MP R+ VSWN++++ C NGLV E+ + R LV
Sbjct: 275 MYSKMGDIESARWVFYKMPTRNLVSWNAMISGCVRNGLVGESFDLFHR----------LV 324
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
S GGF + T+ S+L C++ L+ GK HG
Sbjct: 325 RSS---GGF-----------------------DLTTIVSLLQGCSQTASLATGKILHGCA 358
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R+ F SN + +VD+Y +CG + A +F++ +N ++ ++VG +NG+ +A
Sbjct: 359 IRS-FESNLILSTAIVDLYSKCGSLKQATFVFNRMKDRNVITWTAMLVGLAQNGHAEDAL 417
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LF QM+ +GI S TF S++ +
Sbjct: 418 RLFAQMQ------------------------------------EEGIAANSVTFVSLVHS 441
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE-NIENLL 299
CA + SL++G+ IH LG D ALV+MY + + A+ F + + +L
Sbjct: 442 CAHLGSLKRGRSIHGHLFRLGFAFDIVNMTALVDMYAKCGKINLAERIFSHGSISKDVVL 501
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
G+ + + + A+ ++ +M+ L P+ T +LSACS +E+G +
Sbjct: 502 WNSMITGYGMHGHGYQAVGIYHKMIEEGLKPNQTTFLSLLSACSHSRLVEQGISLFNSME 561
Query: 360 RCGYDSDVHIGTA-LVDMYAKCGSLKHARLAYKRIS-TPDLVSQNAMLTAYAMHGHGKEG 417
R + A LVD+ ++ G + A+ +++ P A+L+ H + G
Sbjct: 562 RDHNIRPIEKHYACLVDLLSRAGRFEEAQALIEKMPFQPGTAVLEALLSGCRTHKNINLG 621
Query: 418 IAHFRRILA 426
I ++LA
Sbjct: 622 IQTSDKLLA 630
>gi|147780302|emb|CAN70248.1| hypothetical protein VITISV_032008 [Vitis vinifera]
Length = 679
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 185/570 (32%), Positives = 301/570 (52%), Gaps = 55/570 (9%)
Query: 85 MQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVY----- 139
M A G P+ SVL +C ++ L G+ HG I R G + + N L+++Y
Sbjct: 1 MLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWS 60
Query: 140 -------RRC-GDMLSAL---KIFSKFSIKNEVSC--NTIIVGYCENGNVAEA------- 179
R C ML + + K S +++ C + + G +NG++ +
Sbjct: 61 LEEGGVQRFCDSKMLGGIPEPREIGKCSNSHDLPCELDERVAGIDQNGDLNQMSNILYQV 120
Query: 180 ---RELFDQME-------------HLGV---------QRGIISWNSMISGYVDNSLYDEA 214
+++FD+ + +LG +R I+SWN++ISG N ++++A
Sbjct: 121 NTYKKVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDA 180
Query: 215 FSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVE 274
M R++ D + P SFT SVL A+ +L KGKEIH AI G +D F+G +L++
Sbjct: 181 LMMVREMGNAD-LRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLID 239
Query: 275 MYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYT 334
MY + + + F + + + G N ++ F +ML + P+ +
Sbjct: 240 MYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVS 299
Query: 335 VGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS 394
I+ AC+ L T+ GKQ+H Y IR +D +V I +ALVDMYAKCG+++ AR + ++
Sbjct: 300 FSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKME 359
Query: 395 TPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSE 454
D+VS AM+ YA+HGH + I+ F+R+ G +P++++F++ L+AC HAG + +
Sbjct: 360 LYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWK 419
Query: 455 FFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSH 513
+F+ M Y + P L+HY + DLL R G L EAYEFI + + P +W LL C H
Sbjct: 420 YFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAACRVH 479
Query: 514 GNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSW 573
N+E + + +L ++P N G YV+L+N+++ AGRW D + R M+D+ M K P CSW
Sbjct: 480 KNIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAGRWKDARKLRIAMRDKGMKKKPACSW 539
Query: 574 IEDRDEIHKFRASDRSH---DRSEEIYTII 600
IE ++++H F A D+SH DR E ++
Sbjct: 540 IEIKNKVHAFVAGDKSHPYYDRINEALKVL 569
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 150/336 (44%), Gaps = 72/336 (21%)
Query: 8 LDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIG 67
L +KVF+MMP+RD +VSW+ VI
Sbjct: 146 LGSLRKVFEMMPKRD------------------------------------IVSWNTVIS 169
Query: 68 GFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMS 127
G QNG E+A+ M+ M L P++ TLSSVLP A L GKE HGY RNG+ +
Sbjct: 170 GNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDA 229
Query: 128 NPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQME 187
+ F+ + L+D+Y +C + + ++F + +S N+II G +NG E + F QM
Sbjct: 230 DVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQM- 288
Query: 188 HLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSL 247
L+ + I+P +F S++ ACA + +L
Sbjct: 289 ---------------------------------LIAK--IKPNHVSFSSIMPACAHLTTL 313
Query: 248 RKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGF 307
GK++H I + F+ ALV+MY + ++ A+ FD++E + + G+
Sbjct: 314 HLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGY 373
Query: 308 EPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACS 343
+ + ++A+ LF M + P+ +L+ACS
Sbjct: 374 ALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACS 409
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 127/273 (46%), Gaps = 68/273 (24%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC +DD+ +VF M+P+ D +S
Sbjct: 240 MYAKCTRVDDSCRVFYMLPQHDGIS----------------------------------- 264
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
W+++I G QNG +E + +M ++PN + SS++PACA L L LGK+ HGYI
Sbjct: 265 -WNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYI 323
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R+ F N F+ + LVD+Y +CG++ +A IF K + + VS +I+GY +G+ +A
Sbjct: 324 IRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAI 383
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFR-------------------DL 221
LF +ME GV+ +++ ++++ L DEA+ F DL
Sbjct: 384 SLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADL 443
Query: 222 LMRDG-------------IEPTSFTFGSVLIAC 241
L R G IEPT + ++L AC
Sbjct: 444 LGRVGRLEEAYEFISDMHIEPTGSVWSTLLAAC 476
>gi|449440359|ref|XP_004137952.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37310-like [Cucumis sativus]
Length = 595
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 193/616 (31%), Positives = 309/616 (50%), Gaps = 101/616 (16%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
Y K GS+ DA VF +P ++ SWN+++ + + + + L+ SSL N
Sbjct: 47 FYSKSGSIRDAYNVFGKIPRKNIFSWNALLISYTLHNM---HTDLLKLFSSLVNS----- 98
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLS-LGKEFHGY 119
+ ++P+ T++ L A A L S L KE H +
Sbjct: 99 -------------------------NSTDVKPDRFTVTCALKALASLFSNSGLAKEVHSF 133
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
I R G + FVVN L+ Y RC +++ A
Sbjct: 134 ILRRGLEYDIFVVNALITFYSRCDELVLA------------------------------- 162
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
R +FD+M +R I+SWN+M++GY Y++ +FR +L ++P + T SVL
Sbjct: 163 RIMFDRMP----ERDIVSWNAMLAGYSQGGSYEKCKELFRVMLSSLEVKPNALTAVSVLQ 218
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE--- 296
ACA N L G E+H ++ D + A++ +Y + L A+ F+E+ +
Sbjct: 219 ACAQSNDLIFGIEVHRFVNESQIKMDVSLWNAVIGLYAKCGSLDYARELFEEMLEKDAIT 278
Query: 297 --NLLGKMKEDGF------------EPNVYTWNAM--------------QLFSEMLSLDL 328
+++ GF P + TWNA+ +F M S
Sbjct: 279 YCSMISGYMVHGFVNQAMDLFREQERPRLPTWNAVISGLVQNNRQEGAVDIFRAMQSHGC 338
Query: 329 TPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARL 388
P+ T+ IL S +T++ GK++H YAIR YD ++++ TA++D YAKCG L A+L
Sbjct: 339 RPNTVTLASILPVFSHFSTLKGGKEIHGYAIRNTYDRNIYVATAIIDSYAKCGYLHGAQL 398
Query: 389 AYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGS 448
+ +I L++ ++++AYA+HG ++ F +L +G +PD ++F S L+AC H+G
Sbjct: 399 VFDQIKGRSLIAWTSIISAYAVHGDANVALSLFYEMLTNGIQPDQVTFTSVLAACAHSGE 458
Query: 449 IKTGSEFFD-LMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALL 507
+ + F+ L+ Y ++P ++HY CMV +LSRAG+L +A EFI K+P+ P + +WGALL
Sbjct: 459 LDEAWKIFNVLLPEYGIQPLVEHYACMVGVLSRAGKLSDAVEFISKMPLEPTAKVWGALL 518
Query: 508 GGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHK 567
G G++E G+ DRL E+EP NTGNYV++ANL++ +GRW D R MK+ R+ K
Sbjct: 519 NGASVAGDVELGKYVFDRLFEIEPENTGNYVIMANLYSQSGRWKDADTIRDLMKEVRLKK 578
Query: 568 SPGCSWIEDRDEIHKF 583
PG SWIE + +F
Sbjct: 579 IPGNSWIETSGGMQRF 594
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 147/300 (49%), Gaps = 34/300 (11%)
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
+G ++ C D R GK++HA + + D F+G L+ Y + I
Sbjct: 6 YGRLIQHCTDHLFFRVGKQLHARLVLSSVVPDNFLGSKLISFYSKS----------GSIR 55
Query: 294 NIENLLGKMKEDGFEPNVYTWNA--------------MQLFSEML---SLDLTPDIYTVG 336
+ N+ GK+ N+++WNA ++LFS ++ S D+ PD +TV
Sbjct: 56 DAYNVFGKIPRK----NIFSWNALLISYTLHNMHTDLLKLFSSLVNSNSTDVKPDRFTVT 111
Query: 337 IILSACSSL-ATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST 395
L A +SL + K+VH++ +R G + D+ + AL+ Y++C L AR+ + R+
Sbjct: 112 CALKALASLFSNSGLAKEVHSFILRRGLEYDIFVVNALITFYSRCDELVLARIMFDRMPE 171
Query: 396 PDLVSQNAMLTAYAMHGHGKEGIAHFRRILAS-GFRPDHISFLSALSACVHAGSIKTGSE 454
D+VS NAML Y+ G ++ FR +L+S +P+ ++ +S L AC + + G E
Sbjct: 172 RDIVSWNAMLAGYSQGGSYEKCKELFRVMLSSLEVKPNALTAVSVLQACAQSNDLIFGIE 231
Query: 455 FFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
+ +K + + ++ L ++ G L A E +++ + D++ + +++ G + HG
Sbjct: 232 VHRFVNESQIKMDVSLWNAVIGLYAKCGSLDYARELFEEM-LEKDAITYCSMISGYMVHG 290
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 86/189 (45%), Gaps = 11/189 (5%)
Query: 336 GIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST 395
G ++ C+ GKQ+HA + D +G+ L+ Y+K GS++ A + +I
Sbjct: 7 GRLIQHCTDHLFFRVGKQLHARLVLSSVVPDNFLGSKLISFYSKSGSIRDAYNVFGKIPR 66
Query: 396 PDLVSQNAMLTAYAMHGHGKEGIAHFRRILASG---FRPDHISFLSALSACVHAGSIKTG 452
++ S NA+L +Y +H + + F ++ S +PD + AL A S+ +
Sbjct: 67 KNIFSWNALLISYTLHNMHTDLLKLFSSLVNSNSTDVKPDRFTVTCALKAL---ASLFSN 123
Query: 453 SEFFDLMAYYDVKPSLKHYTCMVDLL----SRAGELGEAYEFIKKIPMAPDSVMWGALLG 508
S + + ++ L++ +V+ L SR EL A ++P D V W A+L
Sbjct: 124 SGLAKEVHSFILRRGLEYDIFVVNALITFYSRCDELVLARIMFDRMP-ERDIVSWNAMLA 182
Query: 509 GCVSHGNLE 517
G G+ E
Sbjct: 183 GYSQGGSYE 191
>gi|75273443|sp|Q9LIQ7.1|PP252_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g24000, mitochondrial; Flags: Precursor
gi|9294669|dbj|BAB03018.1| unnamed protein product [Arabidopsis thaliana]
Length = 633
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 181/521 (34%), Positives = 275/521 (52%), Gaps = 41/521 (7%)
Query: 81 MLFRMQAEGLE-----PNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGL 135
+L R + LE + R +++L C + L G+ H +I ++ F + + N L
Sbjct: 42 LLLRTSSNDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTL 101
Query: 136 VDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGI 195
+++Y +CG + EAR++F++M QR
Sbjct: 102 LNMYAKCGSL-------------------------------EEARKVFEKMP----QRDF 126
Query: 196 ISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHA 255
++W ++ISGY + +A F +L R G P FT SV+ A A G ++H
Sbjct: 127 VTWTTLISGYSQHDRPCDALLFFNQML-RFGYSPNEFTLSSVIKAAAAERRGCCGHQLHG 185
Query: 256 LAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWN 315
+ G S+ VG AL+++Y RY + AQ+ FD +E+ ++ G T
Sbjct: 186 FCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEK 245
Query: 316 AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVD 375
A++LF ML P ++ + ACSS +E+GK VHAY I+ G G L+D
Sbjct: 246 ALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLD 305
Query: 376 MYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHIS 435
MYAK GS+ AR + R++ D+VS N++LTAYA HG GKE + F + G RP+ IS
Sbjct: 306 MYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEIS 365
Query: 436 FLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIP 495
FLS L+AC H+G + G +++LM + P HY +VDLL RAG+L A FI+++P
Sbjct: 366 FLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMP 425
Query: 496 MAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLAR 555
+ P + +W ALL C H N E G AA+ + EL+P++ G +V+L N++A GRW+D AR
Sbjct: 426 IEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAAR 485
Query: 556 TRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEI 596
R+KMK+ + K P CSW+E + IH F A+D H + EEI
Sbjct: 486 VRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEI 526
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 110/423 (26%), Positives = 176/423 (41%), Gaps = 83/423 (19%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGSL++A+KVF+ MP+RD V
Sbjct: 104 MYAKCGSLEEARKVFEKMPQRD------------------------------------FV 127
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+ +I G++Q+ +A+ +M G PN TLSSV+ A A ++ G + HG+
Sbjct: 128 TWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFC 187
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ GF SN V + L+D+Y R G M A +F +N+VS N +I G+ +A
Sbjct: 188 VKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKAL 247
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
ELF M +RDG P+ F++ S+ A
Sbjct: 248 ELFQGM------------------------------------LRDGFRPSHFSYASLFGA 271
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFD-----EIENI 295
C+ L +GK +HA I G + F G L++MY + + A+ FD ++ +
Sbjct: 272 CSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSW 331
Query: 296 ENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVH 355
+LL + GF W F EM + + P+ + +L+ACS ++ G +
Sbjct: 332 NSLLTAYAQHGFGKEAVWW-----FEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYY 386
Query: 356 AYAIRCGYDSDVHIGTALVDMYAKCGSLKHA-RLAYKRISTPDLVSQNAMLTAYAMHGHG 414
+ G + +VD+ + G L A R + P A+L A MH +
Sbjct: 387 ELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNT 446
Query: 415 KEG 417
+ G
Sbjct: 447 ELG 449
>gi|38344863|emb|CAE01289.2| OSJNBa0020P07.6 [Oryza sativa Japonica Group]
Length = 854
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 195/584 (33%), Positives = 310/584 (53%), Gaps = 49/584 (8%)
Query: 25 SWNSVVTACAANGLVLEALECLERMSSLDNETP---NLVSWSAVIGGFTQNGYDEEAIGM 81
++N++++ A GLV +A +R+ TP ++V+W+ ++ Q+G +EA+
Sbjct: 205 AFNALLSMYARLGLVADA----QRL--FAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQT 258
Query: 82 LFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNG-FMSNPFVVNGLVDVYR 140
L+ M A G+ P+ T +S LPAC+RL+ L +G+E H Y+ ++ +N FV + LVD+
Sbjct: 259 LYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDM-- 316
Query: 141 RCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNS 200
Y + V +AR++FD + G Q G+ WN+
Sbjct: 317 -----------------------------YATHEQVGKARQVFDMVPDSGKQLGM--WNA 345
Query: 201 MISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIAL 260
MI GY + +EA +F + G P T SVL ACA + + +H +
Sbjct: 346 MICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKR 405
Query: 261 GLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLF 320
G+ + FV AL++MY R A+ F ++ + + G + +A QL
Sbjct: 406 GMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLA 465
Query: 321 SEMLSLD---LTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMY 377
EM L+ + P+ T+ +L C+ LA RGK++H YA+R D+DV +G+ALVDMY
Sbjct: 466 REMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMY 525
Query: 378 AKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASG-FRPDHISF 436
AKCG L +R + R+ + ++ N ++ AY MHG G E F R+ ASG RP+ ++F
Sbjct: 526 AKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTF 585
Query: 437 LSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIP 495
++AL+AC H+G + G + F M + V+P+ C+VD+L RAG L EAY + +
Sbjct: 586 MAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSME 645
Query: 496 MAPDSV-MWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLA 554
V W +LG C H N+ G+IA +RL+ELEP +YV+L N+++ AG+W+ A
Sbjct: 646 TGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQWTRAA 705
Query: 555 RTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYT 598
R +M+ R + K PGCSWIE IH+F A + +H SEE++
Sbjct: 706 EVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVHA 749
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 120/465 (25%), Positives = 187/465 (40%), Gaps = 81/465 (17%)
Query: 96 TLSSVLPACARLQKLSLGKEFHGYITRNGFM--SNPFVVNGLVDVYRRCGDMLSALKIFS 153
L + + A L+ + H R G + +P V N L+ Y RCG + +AL++F
Sbjct: 59 ALPPAIKSAAALRDARSARAIHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALEVFG 118
Query: 154 KF--SIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLY 211
S + VS N++I C LF + +H
Sbjct: 119 SISDSAHDAVSFNSLISALC----------LFRRWDHA---------------------- 146
Query: 212 DEAFSMFRDLLMRDGIEPTSFTFGSVLIACADM----NSLRKGKEIHALAIALGL--QSD 265
++ G TSFT SVL A + + ++R G+E HA A+ GL
Sbjct: 147 ----LAALRAMLAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQ 202
Query: 266 TFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAM-------- 317
F AL+ MY R + AQ F G G +V TWN M
Sbjct: 203 RFAFNALLSMYARLGLVADAQRLF---------AGATPGRG---DVVTWNTMVSVLVQSG 250
Query: 318 ------QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCG-YDSDVHIG 370
Q +M++L + PD T L ACS L ++ G+++HAY I+ ++ +
Sbjct: 251 MFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVA 310
Query: 371 TALVDMYAKCGSLKHARLAYKRISTPDLVSQ----NAMLTAYAMHGHGKEGIAHFRRILA 426
+ALVDMYA + AR + + PD Q NAM+ YA G +E + F R+ A
Sbjct: 311 SALVDMYATHEQVGKARQVFDMV--PDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEA 368
Query: 427 -SGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELG 485
+GF P + S L AC + + + + + ++D+ +R G+
Sbjct: 369 EAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTD 428
Query: 486 EAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELE 530
A + + PD V W L+ GCV G++ A + +LE
Sbjct: 429 VARRIFAMVDL-PDVVSWNTLITGCVVQGHVADAFQLAREMQQLE 472
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 109/239 (45%), Gaps = 34/239 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY + G D A+++F M+ D VSWN+++T C G V +A + M L+
Sbjct: 420 MYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEE------ 473
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
G+ PNA TL ++LP CA L + GKE HGY
Sbjct: 474 ---------------------------GGVVPNAITLMTLLPGCAILAAPARGKEIHGYA 506
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R+ ++ V + LVD+Y +CG + + +F + +N ++ N +I+ Y +G EA
Sbjct: 507 VRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEAT 566
Query: 181 ELFDQMEHLGVQR-GIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
LFD+M G R +++ + ++ + + D +F + G+EPT V+
Sbjct: 567 VLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVV 625
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 58/111 (52%), Gaps = 1/111 (0%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG L ++ VF +P R+ ++WN ++ A +GL EA +RM++ PN V
Sbjct: 524 MYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEV 583
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKL 110
++ A + + +G + + + M+ + G+EP L+ V+ R +L
Sbjct: 584 TFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRL 634
>gi|296082276|emb|CBI21281.3| unnamed protein product [Vitis vinifera]
Length = 785
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 194/635 (30%), Positives = 331/635 (52%), Gaps = 47/635 (7%)
Query: 4 KCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWS 63
K G L A+++F+ MP ++ VS N +++ +G + EA + + M V+W+
Sbjct: 59 KNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGNLGEARKLFDGMVE-----RTAVTWT 113
Query: 64 AVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRN 123
+IGG++Q +EA + +MQ G EP+ T ++L C + + + I +
Sbjct: 114 ILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKL 173
Query: 124 GFMSNPFVVNGLVDVYRRCGDMLSALKIFSK----------------------------- 154
G+ S V N LVD Y + + A ++F +
Sbjct: 174 GYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSFTFAAVLCANIGLDDIVLGQQIH 233
Query: 155 -FSIK-----NEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDN 208
F IK N N ++ Y ++ +V +AR+LFD+M Q G+ S+N +ISGY +
Sbjct: 234 SFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPE---QDGV-SYNVIISGYAWD 289
Query: 209 SLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFV 268
+ AF +FR+L + F F ++L ++ G++IHA I S+ V
Sbjct: 290 GKHKYAFDLFRELQF-TAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILV 348
Query: 269 GGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDL 328
G +LV+MY + A+M F + + + + + +QLF++M +
Sbjct: 349 GNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASV 408
Query: 329 TPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARL 388
D T +L A +S+A++ GKQ+H++ I+ G+ S+V G+AL+D+YAKCGS+K A
Sbjct: 409 IADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQ 468
Query: 389 AYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGS 448
++ + ++VS NAM++AYA +G + + F+ ++ SG +PD +SFL LSAC H+G
Sbjct: 469 TFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGL 528
Query: 449 IKTGSEFFDLMA-YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALL 507
++ G F+ M Y + P +HY +VD+L R+G EA + + ++P+ PD +MW ++L
Sbjct: 529 VEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVL 588
Query: 508 GGCVSHGNLEFGQIAADRLIELEP-NNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMH 566
C H N E + AAD+L +E + YV ++N++A AG+W ++++ + M+DR +
Sbjct: 589 NACRIHKNQELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVHKAMRDRGVK 648
Query: 567 KSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
K P SW+E + E H F A+DR H + EEI ID
Sbjct: 649 KLPAYSWVEIKHETHMFSANDRCHPQIEEIRKKID 683
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 127/498 (25%), Positives = 216/498 (43%), Gaps = 76/498 (15%)
Query: 90 LEPNARTLSSVLPACARLQ----KLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDM 145
PNA + L + A LQ +L++ I + GF + N V + + G++
Sbjct: 4 FRPNALQNLTSLTSLASLQSPKLRLNVVNNIDARIVKTGFDPDTSRSNFRVGNFLKNGEL 63
Query: 146 LSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGY 205
A ++F K KN VS N +I GY ++GN+ EAR+LFD M V+R ++W +I GY
Sbjct: 64 SQARQLFEKMPHKNTVSTNMMISGYVKSGNLGEARKLFDGM----VERTAVTWTILIGGY 119
Query: 206 VDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSD 265
+ + EAF +F + R G EP TF ++L C + ++ I LG S
Sbjct: 120 SQLNQFKEAFELFVQ-MQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSR 178
Query: 266 TFVGGALVEMYCRYQDLVAAQMAFDEIENIEN----------------LLGK-----MKE 304
VG LV+ YC+ L A F E+ I++ +LG+ + +
Sbjct: 179 LIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSFTFAAVLCANIGLDDIVLGQQIHSFVIK 238
Query: 305 DGFEPNVYTWNAM--------------QLFSEM----------------------LSLDL 328
F NV+ NA+ +LF EM + DL
Sbjct: 239 TNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDL 298
Query: 329 TPDI---------YTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAK 379
++ + +LS S+ E G+Q+HA I DS++ +G +LVDMYAK
Sbjct: 299 FRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAK 358
Query: 380 CGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSA 439
CG + A + + ++ V AM++AY G +EG+ F ++ + D +F S
Sbjct: 359 CGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASL 418
Query: 440 LSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPD 499
L A S+ G + + ++ + ++D+ ++ G + +A + +++P +
Sbjct: 419 LRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMP-DRN 477
Query: 500 SVMWGALLGGCVSHGNLE 517
V W A++ +G E
Sbjct: 478 IVSWNAMISAYAQNGEAE 495
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 139/301 (46%), Gaps = 45/301 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG ++A+ +F + R V W ++++A
Sbjct: 355 MYAKCGKFEEAEMIFTNLTHRSAVPWTAMISA---------------------------- 386
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+ Q G+ EE + + +M+ + + T +S+L A A + LSLGK+ H +I
Sbjct: 387 --------YVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFI 438
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
++GFMSN F + L+DVY +CG + A++ F + +N VS N +I Y +NG
Sbjct: 439 IKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATL 498
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+ F +M G+Q +S+ ++S + L +E F + ++P + SV+
Sbjct: 499 KSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVV-- 556
Query: 241 CADMNSLRKGK--EIHALAIALGLQSDTFVGGALVEMYCR-YQDLVAAQMAFDEIENIEN 297
DM R G+ E L + + D + +++ CR +++ A+ A D++ N+E
Sbjct: 557 --DM-LCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNA-CRIHKNQELARRAADQLFNMEE 612
Query: 298 L 298
L
Sbjct: 613 L 613
>gi|297602077|ref|NP_001052059.2| Os04g0118700 [Oryza sativa Japonica Group]
gi|222628272|gb|EEE60404.1| hypothetical protein OsJ_13579 [Oryza sativa Japonica Group]
gi|255675134|dbj|BAF13973.2| Os04g0118700 [Oryza sativa Japonica Group]
Length = 856
Score = 324 bits (831), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 195/584 (33%), Positives = 310/584 (53%), Gaps = 49/584 (8%)
Query: 25 SWNSVVTACAANGLVLEALECLERMSSLDNETP---NLVSWSAVIGGFTQNGYDEEAIGM 81
++N++++ A GLV +A +R+ TP ++V+W+ ++ Q+G +EA+
Sbjct: 207 AFNALLSMYARLGLVADA----QRL--FAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQT 260
Query: 82 LFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNG-FMSNPFVVNGLVDVYR 140
L+ M A G+ P+ T +S LPAC+RL+ L +G+E H Y+ ++ +N FV + LVD+
Sbjct: 261 LYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDM-- 318
Query: 141 RCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNS 200
Y + V +AR++FD + G Q G+ WN+
Sbjct: 319 -----------------------------YATHEQVGKARQVFDMVPDSGKQLGM--WNA 347
Query: 201 MISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIAL 260
MI GY + +EA +F + G P T SVL ACA + + +H +
Sbjct: 348 MICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKR 407
Query: 261 GLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLF 320
G+ + FV AL++MY R A+ F ++ + + G + +A QL
Sbjct: 408 GMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLA 467
Query: 321 SEMLSLD---LTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMY 377
EM L+ + P+ T+ +L C+ LA RGK++H YA+R D+DV +G+ALVDMY
Sbjct: 468 REMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMY 527
Query: 378 AKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASG-FRPDHISF 436
AKCG L +R + R+ + ++ N ++ AY MHG G E F R+ ASG RP+ ++F
Sbjct: 528 AKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTF 587
Query: 437 LSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIP 495
++AL+AC H+G + G + F M + V+P+ C+VD+L RAG L EAY + +
Sbjct: 588 MAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSME 647
Query: 496 MAPDSV-MWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLA 554
V W +LG C H N+ G+IA +RL+ELEP +YV+L N+++ AG+W+ A
Sbjct: 648 TGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQWTRAA 707
Query: 555 RTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYT 598
R +M+ R + K PGCSWIE IH+F A + +H SEE++
Sbjct: 708 EVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVHA 751
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 120/465 (25%), Positives = 187/465 (40%), Gaps = 81/465 (17%)
Query: 96 TLSSVLPACARLQKLSLGKEFHGYITRNGFM--SNPFVVNGLVDVYRRCGDMLSALKIFS 153
L + + A L+ + H R G + +P V N L+ Y RCG + +AL++F
Sbjct: 61 ALPPAIKSAAALRDARSARAIHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALEVFG 120
Query: 154 KF--SIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLY 211
S + VS N++I C LF + +H
Sbjct: 121 SISDSAHDAVSFNSLISALC----------LFRRWDHA---------------------- 148
Query: 212 DEAFSMFRDLLMRDGIEPTSFTFGSVLIACADM----NSLRKGKEIHALAIALGL--QSD 265
++ G TSFT SVL A + + ++R G+E HA A+ GL
Sbjct: 149 ----LAALRAMLAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQ 204
Query: 266 TFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAM-------- 317
F AL+ MY R + AQ F G G +V TWN M
Sbjct: 205 RFAFNALLSMYARLGLVADAQRLF---------AGATPGRG---DVVTWNTMVSVLVQSG 252
Query: 318 ------QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCG-YDSDVHIG 370
Q +M++L + PD T L ACS L ++ G+++HAY I+ ++ +
Sbjct: 253 MFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVA 312
Query: 371 TALVDMYAKCGSLKHARLAYKRISTPDLVSQ----NAMLTAYAMHGHGKEGIAHFRRILA 426
+ALVDMYA + AR + + PD Q NAM+ YA G +E + F R+ A
Sbjct: 313 SALVDMYATHEQVGKARQVFDMV--PDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEA 370
Query: 427 -SGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELG 485
+GF P + S L AC + + + + + ++D+ +R G+
Sbjct: 371 EAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTD 430
Query: 486 EAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELE 530
A + + PD V W L+ GCV G++ A + +LE
Sbjct: 431 VARRIFAMVDL-PDVVSWNTLITGCVVQGHVADAFQLAREMQQLE 474
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 109/239 (45%), Gaps = 34/239 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY + G D A+++F M+ D VSWN+++T C G V +A + M L+
Sbjct: 422 MYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEE------ 475
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
G+ PNA TL ++LP CA L + GKE HGY
Sbjct: 476 ---------------------------GGVVPNAITLMTLLPGCAILAAPARGKEIHGYA 508
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R+ ++ V + LVD+Y +CG + + +F + +N ++ N +I+ Y +G EA
Sbjct: 509 VRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEAT 568
Query: 181 ELFDQMEHLGVQR-GIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
LFD+M G R +++ + ++ + + D +F + G+EPT V+
Sbjct: 569 VLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVV 627
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 58/111 (52%), Gaps = 1/111 (0%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG L ++ VF +P R+ ++WN ++ A +GL EA +RM++ PN V
Sbjct: 526 MYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEV 585
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKL 110
++ A + + +G + + + M+ + G+EP L+ V+ R +L
Sbjct: 586 TFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRL 636
>gi|116308873|emb|CAH66009.1| H0613H07.7 [Oryza sativa Indica Group]
gi|116317921|emb|CAH65944.1| H0716A07.2 [Oryza sativa Indica Group]
Length = 854
Score = 324 bits (831), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 195/584 (33%), Positives = 310/584 (53%), Gaps = 49/584 (8%)
Query: 25 SWNSVVTACAANGLVLEALECLERMSSLDNETP---NLVSWSAVIGGFTQNGYDEEAIGM 81
++N++++ A GLV +A +R+ TP ++V+W+ ++ Q+G +EA+
Sbjct: 205 AFNALLSMYARLGLVADA----QRL--FAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQT 258
Query: 82 LFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNG-FMSNPFVVNGLVDVYR 140
L+ M A G+ P+ T +S LPAC+RL+ L +G+E H Y+ ++ +N FV + LVD+
Sbjct: 259 LYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDM-- 316
Query: 141 RCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNS 200
Y + V +AR++FD + G Q G+ WN+
Sbjct: 317 -----------------------------YATHEQVGKARQVFDMVPDSGKQLGM--WNA 345
Query: 201 MISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIAL 260
MI GY + +EA +F + G P T SVL ACA + + +H +
Sbjct: 346 MICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKR 405
Query: 261 GLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLF 320
G+ + FV AL++MY R A+ F ++ + + G + +A QL
Sbjct: 406 GMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLA 465
Query: 321 SEMLSLD---LTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMY 377
EM L+ + P+ T+ +L C+ LA RGK++H YA+R D+DV +G+ALVDMY
Sbjct: 466 REMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMY 525
Query: 378 AKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASG-FRPDHISF 436
AKCG L +R + R+ + ++ N ++ AY MHG G E F R+ ASG RP+ ++F
Sbjct: 526 AKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTF 585
Query: 437 LSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIP 495
++AL+AC H+G + G + F M + V+P+ C+VD+L RAG L EAY + +
Sbjct: 586 MAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSME 645
Query: 496 MAPDSV-MWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLA 554
V W +LG C H N+ G+IA +RL+ELEP +YV+L N+++ AG+W+ A
Sbjct: 646 AGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQWTRAA 705
Query: 555 RTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYT 598
R +M+ R + K PGCSWIE IH+F A + +H SEE++
Sbjct: 706 EVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVHA 749
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 120/465 (25%), Positives = 187/465 (40%), Gaps = 81/465 (17%)
Query: 96 TLSSVLPACARLQKLSLGKEFHGYITRNGFM--SNPFVVNGLVDVYRRCGDMLSALKIFS 153
L + + A L+ + H R G + +P V N L+ Y RCG + +AL++F
Sbjct: 59 ALPPAIKSAAALRDARSARAIHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALEVFG 118
Query: 154 KF--SIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLY 211
S + VS N++I C LF + +H
Sbjct: 119 SISDSAHDAVSFNSLISALC----------LFRRWDHA---------------------- 146
Query: 212 DEAFSMFRDLLMRDGIEPTSFTFGSVLIACADM----NSLRKGKEIHALAIALGL--QSD 265
++ G TSFT SVL A + + ++R G+E HA A+ GL
Sbjct: 147 ----LAALRAMLAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQ 202
Query: 266 TFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAM-------- 317
F AL+ MY R + AQ F G G +V TWN M
Sbjct: 203 RFAFNALLSMYARLGLVADAQRLF---------AGATPGRG---DVVTWNTMVSVLVQSG 250
Query: 318 ------QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCG-YDSDVHIG 370
Q +M++L + PD T L ACS L ++ G+++HAY I+ ++ +
Sbjct: 251 MFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVA 310
Query: 371 TALVDMYAKCGSLKHARLAYKRISTPDLVSQ----NAMLTAYAMHGHGKEGIAHFRRILA 426
+ALVDMYA + AR + + PD Q NAM+ YA G +E + F R+ A
Sbjct: 311 SALVDMYATHEQVGKARQVFDMV--PDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEA 368
Query: 427 -SGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELG 485
+GF P + S L AC + + + + + ++D+ +R G+
Sbjct: 369 EAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTD 428
Query: 486 EAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELE 530
A + + PD V W L+ GCV G++ A + +LE
Sbjct: 429 VARRIFAMVDL-PDVVSWNTLITGCVVQGHVADAFQLAREMQQLE 472
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 109/239 (45%), Gaps = 34/239 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY + G D A+++F M+ D VSWN+++T C G V +A + M L+
Sbjct: 420 MYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEE------ 473
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
G+ PNA TL ++LP CA L + GKE HGY
Sbjct: 474 ---------------------------GGVVPNAITLMTLLPGCAILAAPARGKEIHGYA 506
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R+ ++ V + LVD+Y +CG + + +F + +N ++ N +I+ Y +G EA
Sbjct: 507 VRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEAT 566
Query: 181 ELFDQMEHLGVQR-GIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
LFD+M G R +++ + ++ + + D +F + G+EPT V+
Sbjct: 567 VLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVV 625
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 58/111 (52%), Gaps = 1/111 (0%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG L ++ VF +P R+ ++WN ++ A +GL EA +RM++ PN V
Sbjct: 524 MYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEV 583
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKL 110
++ A + + +G + + + M+ + G+EP L+ V+ R +L
Sbjct: 584 TFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRL 634
>gi|297804022|ref|XP_002869895.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315731|gb|EFH46154.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 853
Score = 324 bits (831), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 188/613 (30%), Positives = 304/613 (49%), Gaps = 102/613 (16%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG DDA K+F+MM D V+
Sbjct: 279 MYSKCGRFDDAIKLFRMMSRADTVT----------------------------------- 303
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
W+ +I G+ Q+G EE++ + M + G+ P+A T SS+LP+ ++ + L ++ H YI
Sbjct: 304 -WNCMISGYVQSGLMEESLIFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCRQIHCYI 362
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R+ + F+ + L+D Y +C + A KIFS+ CN++
Sbjct: 363 MRHSISLDIFLTSALIDAYFKCRGVSMAQKIFSQ--------CNSV-------------- 400
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
++ + +MISGY+ N L +A MFR L++ I P T S+L
Sbjct: 401 -------------DVVVFTAMISGYLHNGLNIDALEMFR-WLVKVKISPNEITLVSILPV 446
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
+ +L+ G+E+H I G + +G A+++MY + + +A++ + G
Sbjct: 447 IGGLLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRM---NLAYE-------IFG 496
Query: 301 KMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSSLA 346
++ + ++ +WN+M +F +M + D ++ LSAC++L
Sbjct: 497 RLSKR----DIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICFDCVSISAALSACANLP 552
Query: 347 TMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLT 406
+ GK +H + I+ DV+ + L+DMYAKCG+LK A + + ++VS N+++
Sbjct: 553 SESFGKAIHGFMIKHSLALDVYSESTLIDMYAKCGNLKAAMNVFDTMKEKNIVSWNSIIA 612
Query: 407 AYAMHGHGKEGIAHFRRIL-ASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDV 464
AY HG K+ + F ++ SG RPD I+FL +S C H G + G FF M Y +
Sbjct: 613 AYGNHGKLKDSLCLFHEMVEKSGNRPDQITFLEIISLCCHVGDVDEGVRFFRSMTQDYGI 672
Query: 465 KPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAAD 524
+P +HY C+VDL RAG L EAYE +K +P PD+ +WG LLG H N+E ++A+
Sbjct: 673 QPQQEHYACVVDLFGRAGRLSEAYETVKSMPFPPDAGVWGTLLGASRLHKNVELAKVASS 732
Query: 525 RLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFR 584
RL++L+P N+G YV+++N A G W + + R MK+R + K PG SWIE H F
Sbjct: 733 RLMDLDPWNSGYYVLISNAHANTGEWESVTKVRSLMKEREVQKIPGYSWIEINKITHLFV 792
Query: 585 ASDRSHDRSEEIY 597
+ D +H S IY
Sbjct: 793 SGDVNHPESSHIY 805
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 112/458 (24%), Positives = 214/458 (46%), Gaps = 37/458 (8%)
Query: 60 VSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
V W+ ++ G+ + G + I M+ + + PNA T VL CA + LG + HG
Sbjct: 201 VIWNVMLNGYAKCGASDSVIKGFSLMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGL 260
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ +G + N L+ +Y +CG A+K+F S + V+ N +I GY ++G + E+
Sbjct: 261 VVVSGLDFEGSIKNSLLSMYSKCGRFDDAIKLFRMMSRADTVTWNCMISGYVQSGLMEES 320
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
F +M + G+ P + TF S+L
Sbjct: 321 LIFFYEM------------------------------------ISSGVLPDAITFSSLLP 344
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
+ + +L ++IH + + D F+ AL++ Y + + + AQ F + +++ ++
Sbjct: 345 SVSKFENLEYCRQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQKIFSQCNSVDVVV 404
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
G+ N +A+++F ++ + ++P+ T+ IL L ++ G+++H + I
Sbjct: 405 FTAMISGYLHNGLNIDALEMFRWLVKVKISPNEITLVSILPVIGGLLALKLGRELHGFII 464
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
+ G+D+ +IG A++DMYAKCG + A + R+S D+VS N+M+T A + I
Sbjct: 465 KKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFGRLSKRDIVSWNSMITRCAQSDNPSAAID 524
Query: 420 HFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLS 479
FR++ SG D +S +ALSAC + S G M + + + + ++D+ +
Sbjct: 525 IFRQMGVSGICFDCVSISAALSACANLPSESFGKAIHGFMIKHSLALDVYSESTLIDMYA 584
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
+ G L A + + V W +++ +HG L+
Sbjct: 585 KCGNLKAAMNVFDTMK-EKNIVSWNSIIAAYGNHGKLK 621
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 159/352 (45%), Gaps = 34/352 (9%)
Query: 91 EPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALK 150
E R LS +L C+ L L GK+ H ++ N + + ++ +Y CG + K
Sbjct: 28 ETLPRRLSLLLQDCSNLTLLRQGKQVHAFVIVNRISGDSYTDERILGMYAMCGSFSNCGK 87
Query: 151 IFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSL 210
+F + + + +S I WNS+IS +V L
Sbjct: 88 MF--YRLDSRLS-------------------------------SIRPWNSIISSFVRMGL 114
Query: 211 YDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGG 270
++A + + +L G+ P TF ++ AC + + + + + +LG+ + FV
Sbjct: 115 LNQALAFYFKMLCF-GVSPDVSTFPCLVKACVALKNFKGIEFLSDTVSSLGMDCNEFVAS 173
Query: 271 ALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTP 330
+L++ Y Y + A FD + + ++ + +G+ + + ++ FS M ++P
Sbjct: 174 SLIKAYLEYGKIDVAGKLFDRVLQKDCVIWNVMLNGYAKCGASDSVIKGFSLMRMDQISP 233
Query: 331 DIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAY 390
+ T +LS C+S ++ G Q+H + G D + I +L+ MY+KCG A +
Sbjct: 234 NAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGLDFEGSIKNSLLSMYSKCGRFDDAIKLF 293
Query: 391 KRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSA 442
+ +S D V+ N M++ Y G +E + F +++SG PD I+F S L +
Sbjct: 294 RMMSRADTVTWNCMISGYVQSGLMEESLIFFYEMISSGVLPDAITFSSLLPS 345
>gi|413923916|gb|AFW63848.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1174
Score = 324 bits (831), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 190/606 (31%), Positives = 295/606 (48%), Gaps = 76/606 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y +C A+ VF MP RD +V
Sbjct: 144 LYIRCARFGPARNVFAKMPMRD------------------------------------VV 167
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEG-LEPNARTLSSVLPACARLQKLSLGKEFHGY 119
+W+A++ G+ +G AI L MQ G L PNA TL S+LP A+ L G H Y
Sbjct: 168 AWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAY 227
Query: 120 ITRNGFMSNP---FVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNV 176
R N + L+D+Y +C ++ A ++F ++N+V+
Sbjct: 228 CLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVT-------------- 273
Query: 177 AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGS 236
W+++I G+V EAF++F+D+L+ ++ + S
Sbjct: 274 ---------------------WSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVAS 312
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
L CA + L G ++HAL G+ +D +L+ MY + + A M FDEI +
Sbjct: 313 ALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKD 372
Query: 297 NLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHA 356
+ G N A +F +M + ++ PDI T+ ++ ACS LA ++ GK H
Sbjct: 373 TISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHG 432
Query: 357 YAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKE 416
I G + I +L+DMYAKCG + +R + ++ D+VS N M+ Y +HG GKE
Sbjct: 433 SVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKE 492
Query: 417 GIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMV 475
F + GF PD ++F+ ++AC H+G + G +FD M + Y + P ++HY CMV
Sbjct: 493 ATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMV 552
Query: 476 DLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTG 535
DLL+R G L EAY+FI+ +P+ D +WGALLG C H N++ G+ + + +L P TG
Sbjct: 553 DLLARGGLLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKLGPEGTG 612
Query: 536 NYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEE 595
N+V+L+N+F+ AGR+ + A R K + KSPG SWIE +H F D+SH S +
Sbjct: 613 NFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGYSWIEINGSLHAFVGGDQSHPCSRD 672
Query: 596 IYTIID 601
IY +D
Sbjct: 673 IYHELD 678
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 117/498 (23%), Positives = 211/498 (42%), Gaps = 45/498 (9%)
Query: 21 RDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIG 80
+D W + + G + A + +R+ + P+ +++A+I ++ G AI
Sbjct: 32 KDKKQWQQELEQHISRGQLALARQVFDRIPA-----PDARAYNALIRAYSWLGPFHAAID 86
Query: 81 MLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYR 140
+ M + PN T VL AC+ L L G+ H + G ++ FV L+D+Y
Sbjct: 87 LYRSMLRFRVAPNKYTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYI 146
Query: 141 RCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNS 200
RC A +F+K +++ V+ N ++ GY +G
Sbjct: 147 RCARFGPARNVFAKMPMRDVVAWNAMLAGYANHG-------------------------- 180
Query: 201 MISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIAL 260
+Y A + D+ G+ P + T S+L A +L +G IHA +
Sbjct: 181 ---------MYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRA 231
Query: 261 GLQSD---TFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAM 317
L+ + +G AL++MY + + LV A F + ++ GF A
Sbjct: 232 CLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAF 291
Query: 318 QLFSEMLSLDLT-PDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDM 376
LF +ML L +V L C+SLA + G Q+HA + G +D+ +L+ M
Sbjct: 292 NLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSM 351
Query: 377 YAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISF 436
YAK G + A + + I+ D +S A+L+ +G +E F+++ A PD +
Sbjct: 352 YAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATM 411
Query: 437 LSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPM 496
+S + AC H +++ G + + ++D+ ++ G++ + + K+P
Sbjct: 412 VSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMP- 470
Query: 497 APDSVMWGALLGGCVSHG 514
A D V W ++ G HG
Sbjct: 471 ARDVVSWNTMIAGYGIHG 488
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 102/382 (26%), Positives = 177/382 (46%), Gaps = 39/382 (10%)
Query: 155 FSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEA 214
+ +K++ + + G +A AR++FD++ + ++N++I Y + A
Sbjct: 29 YEVKDKKQWQQELEQHISRGQLALARQVFDRIPAPDAR----AYNALIRAYSWLGPFHAA 84
Query: 215 FSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVE 274
++R +L R + P +TF VL AC+ + LR G+ IHA A A GL +D FV AL++
Sbjct: 85 IDLYRSML-RFRVAPNKYTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALID 143
Query: 275 MYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAM-----------QLFSEM 323
+Y R A+ N+ KM +V WNAM + +
Sbjct: 144 LYIRCARFGPAR----------NVFAKMPMR----DVVAWNAMLAGYANHGMYHHAIAHL 189
Query: 324 LSLD----LTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSD---VHIGTALVDM 376
L + L P+ T+ +L + + +G +HAY +R + + V IGTAL+DM
Sbjct: 190 LDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDM 249
Query: 377 YAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGF-RPDHIS 435
YAKC L +A + + + V+ +A++ + + E F+ +L G S
Sbjct: 250 YAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATS 309
Query: 436 FLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIP 495
SAL C + G++ L+A + L ++ + ++AG + EA F +I
Sbjct: 310 VASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIA 369
Query: 496 MAPDSVMWGALLGGCVSHGNLE 517
+ D++ +GALL GCV +G E
Sbjct: 370 VK-DTISYGALLSGCVQNGKAE 390
>gi|225448607|ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 820
Score = 324 bits (831), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 191/603 (31%), Positives = 295/603 (48%), Gaps = 72/603 (11%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K GS++D+ VF MM E N V
Sbjct: 265 MYAKLGSIEDSYWVFNMMTEH------------------------------------NQV 288
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A+I G T NG EA + RM+ PN TL SV A +L +++GKE
Sbjct: 289 SWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCA 348
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G N V L+D+Y +CG + A +F N ++C
Sbjct: 349 SELGIEGNVLVGTALIDMYSKCGSLHDARSVFDT----NFINC----------------- 387
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
GV WN+MISGY + EA ++ + ++GI +T+ SV A
Sbjct: 388 ---------GVN---TPWNAMISGYSQSGCSQEALELYVQMC-QNGITSDLYTYCSVFNA 434
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTF-VGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
A SL+ G+ +H + + GL V A+ + Y + L + FD +E + +
Sbjct: 435 IAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDVRKVFDRMEERDIVS 494
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
+ + A+ F M P+ +T +L +C+SL +E G+QVH
Sbjct: 495 WTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGRQVHGLLC 554
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
+ G D++ I +AL+DMYAKCGS+ A + +IS PD+VS A+++ YA HG ++ +
Sbjct: 555 KAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPDIVSWTAIISGYAQHGLVEDALQ 614
Query: 420 HFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLL 478
FRR+ SG + + ++ L L AC H G ++ G +F M Y V P ++HY C++DLL
Sbjct: 615 LFRRMELSGIKANAVTLLCVLFACSHGGMVEEGLFYFQQMEDGYGVVPEMEHYACIIDLL 674
Query: 479 SRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYV 538
R G L +A EFI+K+PM P+ ++W LLGGC HGN+E G+IAA +++ + P + YV
Sbjct: 675 GRVGRLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGNVELGEIAARKILSIRPEYSATYV 734
Query: 539 MLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYT 598
+L+N + G + D R MKD+ + K PG SWI + +HKF + D+ H + +EIY
Sbjct: 735 LLSNTYIETGSYEDGLSLRNVMKDQGVKKEPGYSWISVKGRVHKFYSGDQQHPQKKEIYV 794
Query: 599 IID 601
++
Sbjct: 795 KLE 797
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 145/551 (26%), Positives = 249/551 (45%), Gaps = 65/551 (11%)
Query: 21 RDCVSWNSVVTACAANGLVLEA------------------LECLERMSS--LDNETP--N 58
RDC S+ A A +GLVL++ +C E ++ + +E P N
Sbjct: 126 RDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMPQRN 185
Query: 59 LVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHG 118
+ SW+ +I G T++G + M G+ P+ S+++ +C L L LGK H
Sbjct: 186 VFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKMVHA 245
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
I GF ++ FV L+++Y + G + + +F+ + N+VS N +I G NG
Sbjct: 246 QIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNG---- 301
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDG-IEPTSFTFGSV 237
L+ EAF +F + M++G P +T SV
Sbjct: 302 -------------------------------LHLEAFDLF--VRMKNGACTPNMYTLVSV 328
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDE--IENI 295
A + + GKE+ A LG++ + VG AL++MY + L A+ FD I
Sbjct: 329 SKAVGKLVDVNMGKEVQNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCG 388
Query: 296 ENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVH 355
N G+ + + A++L+ +M +T D+YT + +A ++ +++ G+ VH
Sbjct: 389 VNTPWNAMISGYSQSGCSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVH 448
Query: 356 AYAIRCGYD-SDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHG 414
++CG D V + A+ D Y+KCG L+ R + R+ D+VS ++TAY+ G
Sbjct: 449 GMVLKCGLDLMVVSVNNAIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLG 508
Query: 415 KEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCM 474
+E +A F + GF P+ +F S L +C ++ G + L+ + + +
Sbjct: 509 EEALATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESAL 568
Query: 475 VDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNT 534
+D+ ++ G + EA + KI PD V W A++ G HG +E + R +EL
Sbjct: 569 IDMYAKCGSITEAGKVFDKIS-NPDIVSWTAIISGYAQHGLVE-DALQLFRRMELSGIKA 626
Query: 535 GNYVMLANLFA 545
+L LFA
Sbjct: 627 NAVTLLCVLFA 637
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 160/370 (43%), Gaps = 48/370 (12%)
Query: 91 EPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVV--NGLVDVYRRCGDMLSA 148
+ + L VL CA + K HG + ++ F +V N VY +C + +A
Sbjct: 115 QTQVQDLIDVLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAA 174
Query: 149 LKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDN 208
+F D+M QR + SW MI G ++
Sbjct: 175 CGVF-------------------------------DEMP----QRNVFSWTVMIVGSTEH 199
Query: 209 SLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFV 268
L+ + F F ++L GI P F + +++ +C ++SL GK +HA + G + FV
Sbjct: 200 GLFFDGFKFFCEML-NSGILPDKFAYSAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFV 258
Query: 269 GGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDL 328
+L+ MY + + + F+ + + G N A LF M +
Sbjct: 259 STSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGAC 318
Query: 329 TPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARL 388
TP++YT+ + A L + GK+V A G + +V +GTAL+DMY+KCGSL AR
Sbjct: 319 TPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGTALIDMYSKCGSLHDARS 378
Query: 389 AYKR------ISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSA 442
+ ++TP NAM++ Y+ G +E + + ++ +G D ++ S +A
Sbjct: 379 VFDTNFINCGVNTP----WNAMISGYSQSGCSQEALELYVQMCQNGITSDLYTYCSVFNA 434
Query: 443 CVHAGSIKTG 452
+ S++ G
Sbjct: 435 IAASKSLQFG 444
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/347 (21%), Positives = 149/347 (42%), Gaps = 39/347 (11%)
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTF--VGGALVEMYCRYQDLVAAQMAFDEIEN 294
VL CA+ S+R+ K +H L + + + +Y + + AA FDE+
Sbjct: 124 VLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMP- 182
Query: 295 IENLLGKMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILS 340
+ NV++W M + F EML+ + PD + I+
Sbjct: 183 -------------QRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQ 229
Query: 341 ACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVS 400
+C L ++E GK VHA + G+ + + + T+L++MYAK GS++ + + ++ + VS
Sbjct: 230 SCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVS 289
Query: 401 QNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA 460
NAM++ +G E F R+ P+ + +S A + G E + +
Sbjct: 290 WNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCAS 349
Query: 461 YYDVKPSLKHYTCMVDLLSRAGELGEAYE-FIKKIPMAPDSVMWGALLGGCVSHGNLEFG 519
++ ++ T ++D+ S+ G L +A F + W A++ G G
Sbjct: 350 ELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGC---S 406
Query: 520 QIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMH 566
Q A + +++ N + ++L+ Y ++ +A ++ R +H
Sbjct: 407 QEALELYVQMCQNG-----ITSDLYTYCSVFNAIAASKSLQFGRVVH 448
>gi|125547017|gb|EAY92839.1| hypothetical protein OsI_14639 [Oryza sativa Indica Group]
Length = 702
Score = 324 bits (831), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 195/584 (33%), Positives = 310/584 (53%), Gaps = 49/584 (8%)
Query: 25 SWNSVVTACAANGLVLEALECLERMSSLDNETP---NLVSWSAVIGGFTQNGYDEEAIGM 81
++N++++ A GLV +A +R+ TP ++V+W+ ++ Q+G +EA+
Sbjct: 53 AFNALLSMYARLGLVADA----QRL--FAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQT 106
Query: 82 LFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNG-FMSNPFVVNGLVDVYR 140
L+ M A G+ P+ T +S LPAC+RL+ L +G+E H Y+ ++ +N FV + LVD+
Sbjct: 107 LYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDM-- 164
Query: 141 RCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNS 200
Y + V +AR++FD + G Q G+ WN+
Sbjct: 165 -----------------------------YATHEQVGKARQVFDMVPDSGKQLGM--WNA 193
Query: 201 MISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIAL 260
MI GY + +EA +F + G P T SVL ACA + + +H +
Sbjct: 194 MICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKR 253
Query: 261 GLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLF 320
G+ + FV AL++MY R A+ F ++ + + G + +A QL
Sbjct: 254 GMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLA 313
Query: 321 SEMLSLD---LTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMY 377
EM L+ + P+ T+ +L C+ LA RGK++H YA+R D+DV +G+ALVDMY
Sbjct: 314 REMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMY 373
Query: 378 AKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASG-FRPDHISF 436
AKCG L +R + R+ + ++ N ++ AY MHG G E F R+ ASG RP+ ++F
Sbjct: 374 AKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTF 433
Query: 437 LSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIP 495
++AL+AC H+G + G + F M + V+P+ C+VD+L RAG L EAY + +
Sbjct: 434 MAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSME 493
Query: 496 MAPDSV-MWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLA 554
V W +LG C H N+ G+IA +RL+ELEP +YV+L N+++ AG+W+ A
Sbjct: 494 AGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQWTRAA 553
Query: 555 RTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYT 598
R +M+ R + K PGCSWIE IH+F A + +H SEE++
Sbjct: 554 EVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVHA 597
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 109/239 (45%), Gaps = 34/239 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY + G D A+++F M+ D VSWN+++T C G V +A + M L+
Sbjct: 268 MYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEE------ 321
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
G+ PNA TL ++LP CA L + GKE HGY
Sbjct: 322 ---------------------------GGVVPNAITLMTLLPGCAILAAPARGKEIHGYA 354
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R+ ++ V + LVD+Y +CG + + +F + +N ++ N +I+ Y +G EA
Sbjct: 355 VRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEAT 414
Query: 181 ELFDQMEHLGVQR-GIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
LFD+M G R +++ + ++ + + D +F + G+EPT V+
Sbjct: 415 VLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVV 473
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 94/335 (28%), Positives = 145/335 (43%), Gaps = 41/335 (12%)
Query: 222 LMRDGIEPTSFTFGSVLIACADMNS----LRKGKEIHALAIALGL--QSDTFVGGALVEM 275
++ G TSFT SVL A + + + +R G+E HA A+ GL F AL+ M
Sbjct: 1 MLAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSM 60
Query: 276 YCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAM--------------QLFS 321
Y R + AQ F G G +V TWN M Q
Sbjct: 61 YARLGLVADAQRLF---------AGATPGRG---DVVTWNTMVSVLVQSGMFDEAVQTLY 108
Query: 322 EMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCG-YDSDVHIGTALVDMYAKC 380
+M++L + PD T L ACS L ++ G+++HAY I+ ++ + +ALVDMYA
Sbjct: 109 DMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATH 168
Query: 381 GSLKHARLAYKRISTPDLVSQ----NAMLTAYAMHGHGKEGIAHFRRILA-SGFRPDHIS 435
+ AR + + PD Q NAM+ YA G +E + F R+ A +GF P +
Sbjct: 169 EQVGKARQVFDMV--PDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETT 226
Query: 436 FLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIP 495
S L AC + + + + + ++D+ +R G+ A +
Sbjct: 227 MASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVD 286
Query: 496 MAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELE 530
+ PD V W L+ GCV G++ A + +LE
Sbjct: 287 L-PDVVSWNTLITGCVVQGHVADAFQLAREMQQLE 320
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 58/111 (52%), Gaps = 1/111 (0%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG L ++ VF +P R+ ++WN ++ A +GL EA +RM++ PN V
Sbjct: 372 MYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEV 431
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKL 110
++ A + + +G + + + M+ + G+EP L+ V+ R +L
Sbjct: 432 TFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRL 482
>gi|413923915|gb|AFW63847.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1274
Score = 324 bits (831), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 190/606 (31%), Positives = 295/606 (48%), Gaps = 76/606 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y +C A+ VF MP RD +V
Sbjct: 144 LYIRCARFGPARNVFAKMPMRD------------------------------------VV 167
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEG-LEPNARTLSSVLPACARLQKLSLGKEFHGY 119
+W+A++ G+ +G AI L MQ G L PNA TL S+LP A+ L G H Y
Sbjct: 168 AWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAY 227
Query: 120 ITRNGFMSNP---FVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNV 176
R N + L+D+Y +C ++ A ++F ++N+V+
Sbjct: 228 CLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVT-------------- 273
Query: 177 AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGS 236
W+++I G+V EAF++F+D+L+ ++ + S
Sbjct: 274 ---------------------WSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVAS 312
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
L CA + L G ++HAL G+ +D +L+ MY + + A M FDEI +
Sbjct: 313 ALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKD 372
Query: 297 NLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHA 356
+ G N A +F +M + ++ PDI T+ ++ ACS LA ++ GK H
Sbjct: 373 TISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHG 432
Query: 357 YAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKE 416
I G + I +L+DMYAKCG + +R + ++ D+VS N M+ Y +HG GKE
Sbjct: 433 SVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKE 492
Query: 417 GIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMV 475
F + GF PD ++F+ ++AC H+G + G +FD M + Y + P ++HY CMV
Sbjct: 493 ATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMV 552
Query: 476 DLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTG 535
DLL+R G L EAY+FI+ +P+ D +WGALLG C H N++ G+ + + +L P TG
Sbjct: 553 DLLARGGLLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKLGPEGTG 612
Query: 536 NYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEE 595
N+V+L+N+F+ AGR+ + A R K + KSPG SWIE +H F D+SH S +
Sbjct: 613 NFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGYSWIEINGSLHAFVGGDQSHPCSRD 672
Query: 596 IYTIID 601
IY +D
Sbjct: 673 IYHELD 678
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 117/498 (23%), Positives = 211/498 (42%), Gaps = 45/498 (9%)
Query: 21 RDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIG 80
+D W + + G + A + +R+ + P+ +++A+I ++ G AI
Sbjct: 32 KDKKQWQQELEQHISRGQLALARQVFDRIPA-----PDARAYNALIRAYSWLGPFHAAID 86
Query: 81 MLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYR 140
+ M + PN T VL AC+ L L G+ H + G ++ FV L+D+Y
Sbjct: 87 LYRSMLRFRVAPNKYTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYI 146
Query: 141 RCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNS 200
RC A +F+K +++ V+ N ++ GY +G
Sbjct: 147 RCARFGPARNVFAKMPMRDVVAWNAMLAGYANHG-------------------------- 180
Query: 201 MISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIAL 260
+Y A + D+ G+ P + T S+L A +L +G IHA +
Sbjct: 181 ---------MYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRA 231
Query: 261 GLQSD---TFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAM 317
L+ + +G AL++MY + + LV A F + ++ GF A
Sbjct: 232 CLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAF 291
Query: 318 QLFSEMLSLDLT-PDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDM 376
LF +ML L +V L C+SLA + G Q+HA + G +D+ +L+ M
Sbjct: 292 NLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSM 351
Query: 377 YAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISF 436
YAK G + A + + I+ D +S A+L+ +G +E F+++ A PD +
Sbjct: 352 YAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATM 411
Query: 437 LSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPM 496
+S + AC H +++ G + + ++D+ ++ G++ + + K+P
Sbjct: 412 VSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMP- 470
Query: 497 APDSVMWGALLGGCVSHG 514
A D V W ++ G HG
Sbjct: 471 ARDVVSWNTMIAGYGIHG 488
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 102/382 (26%), Positives = 177/382 (46%), Gaps = 39/382 (10%)
Query: 155 FSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEA 214
+ +K++ + + G +A AR++FD++ + ++N++I Y + A
Sbjct: 29 YEVKDKKQWQQELEQHISRGQLALARQVFDRIPAPDAR----AYNALIRAYSWLGPFHAA 84
Query: 215 FSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVE 274
++R +L R + P +TF VL AC+ + LR G+ IHA A A GL +D FV AL++
Sbjct: 85 IDLYRSML-RFRVAPNKYTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALID 143
Query: 275 MYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAM-----------QLFSEM 323
+Y R A+ N+ KM +V WNAM + +
Sbjct: 144 LYIRCARFGPAR----------NVFAKMPMR----DVVAWNAMLAGYANHGMYHHAIAHL 189
Query: 324 LSLD----LTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSD---VHIGTALVDM 376
L + L P+ T+ +L + + +G +HAY +R + + V IGTAL+DM
Sbjct: 190 LDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDM 249
Query: 377 YAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGF-RPDHIS 435
YAKC L +A + + + V+ +A++ + + E F+ +L G S
Sbjct: 250 YAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATS 309
Query: 436 FLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIP 495
SAL C + G++ L+A + L ++ + ++AG + EA F +I
Sbjct: 310 VASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIA 369
Query: 496 MAPDSVMWGALLGGCVSHGNLE 517
+ D++ +GALL GCV +G E
Sbjct: 370 VK-DTISYGALLSGCVQNGKAE 390
>gi|359477376|ref|XP_002280144.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 642
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 186/577 (32%), Positives = 304/577 (52%), Gaps = 47/577 (8%)
Query: 57 PNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEF 116
PN W+++I G+ +N +EA + +M+ E + T+SSVL A ARL + G+
Sbjct: 64 PNAYLWTSLIHGYVENRQYDEAFSLFIQMRREPISVLNFTISSVLKALARLTRFKGGQAV 123
Query: 117 HGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNV 176
+G++ + GF + V N ++D++ RC + +A + F + K+ VS N +I GY N V
Sbjct: 124 YGFVLKYGFAFDLIVQNSVLDLFMRCRKVDTARQAFDEMCEKDIVSWNMMISGYGNNDRV 183
Query: 177 AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGS 236
AR+ FD+M +R ++SW SMI GYV EA +F + ++D G
Sbjct: 184 DIARKFFDRMP----ERNVVSWTSMICGYVKAGDMAEAQVLFDSMPVKDLASWNVMVSGY 239
Query: 237 VLIA-CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
+ I C + + IH DT ++ +C+ +L +A+ FD + N
Sbjct: 240 MDIGDCVNARIIFGKMPIH----------DTGSWNIMISGFCKAGELESAKDFFDRMPNK 289
Query: 296 ENLLGKMKEDGF-----------------EPNVYTWN--------------AMQLFSEML 324
+ + DG+ N+ TW+ A++LF
Sbjct: 290 NVISWGIMLDGYIKNGDTNGARCLFDQMPMKNLVTWSTMIGGYARNGQPLKALELFERFK 349
Query: 325 SLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLK 384
D+ PD + I+SACS L ++ + + + SD+ + T+L+DMYAKCGS++
Sbjct: 350 EQDIKPDETFILGIISACSQLGIIDAAESIIHNYVGPSLLSDLRVFTSLIDMYAKCGSIE 409
Query: 385 HARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACV 444
A ++ DL+ + M+ A A HG G++ I F ++ + +PD ++FL L+AC
Sbjct: 410 KALQMFEMAHPKDLLCYSTMIAALANHGLGRDAIFLFDKMQRANIKPDSVTFLGVLTACN 469
Query: 445 HAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMW 503
H G + G ++F M + ++PS KHY C+VDLL R G L EAY I+ +P+AP SV+W
Sbjct: 470 HGGLVDEGRKYFKQMTEEFGIQPSEKHYACVVDLLGRVGCLEEAYNLIRNMPIAPHSVVW 529
Query: 504 GALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDR 563
GALL C H N++ ++AA L ++EP+N+GNY++L+N++A AGRW +A+ R K+++
Sbjct: 530 GALLAACRVHCNVQLAEVAAAELFKIEPDNSGNYILLSNIYAAAGRWGSVAKVRAKIREH 589
Query: 564 RMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTII 600
R+ K+ G SWIE +H+F D SH S+ I I+
Sbjct: 590 RVRKNRGSSWIELSHVVHEFVMGDMSHTDSDSISLIL 626
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 99/419 (23%), Positives = 183/419 (43%), Gaps = 32/419 (7%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
++ +C +D A++ F M E+D VSWN +++ N V A + +RM N+V
Sbjct: 145 LFMRCRKVDTARQAFDEMCEKDIVSWNMMISGYGNNDRVDIARKFFDRMPE-----RNVV 199
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPA--CARLQKLSLGKEFHG 118
SW+++I G+ + G EA + M + L +S + C + + H
Sbjct: 200 SWTSMICGYVKAGDMAEAQVLFDSMPVKDLASWNVMVSGYMDIGDCVNARIIFGKMPIHD 259
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
+ N +S + + G++ SA F + KN +S ++ GY +NG+
Sbjct: 260 TGSWNIMISG----------FCKAGELESAKDFFDRMPNKNVISWGIMLDGYIKNGDTNG 309
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
AR LFDQM + +++W++MI GY N +A +F +D +F G ++
Sbjct: 310 ARCLFDQMP----MKNLVTWSTMIGGYARNGQPLKALELFERFKEQDIKPDETFILG-II 364
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
AC+ + + + I + L SD V +L++MY + + A F+ + L
Sbjct: 365 SACSQLGIIDAAESIIHNYVGPSLLSDLRVFTSLIDMYAKCGSIEKALQMFEMAHPKDLL 424
Query: 299 LGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ----- 353
+ +A+ LF +M ++ PD T +L+AC+ ++ G++
Sbjct: 425 CYSTMIAALANHGLGRDAIFLFDKMQRANIKPDSVTFLGVLTACNHGGLVDEGRKYFKQM 484
Query: 354 VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNAMLTAYAMH 411
+ I+ S+ H +VD+ + G L+ A + + P V A+L A +H
Sbjct: 485 TEEFGIQ---PSEKHYA-CVVDLLGRVGCLEEAYNLIRNMPIAPHSVVWGALLAACRVH 539
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 99/480 (20%), Positives = 172/480 (35%), Gaps = 111/480 (23%)
Query: 93 NARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIF 152
N +TL S+ ARL + + S+ FV+N L+ +Y R G A K+F
Sbjct: 11 NCKTLKSLKSIHARL------------LIESSVASSEFVINKLLRLYSRFGATDYAHKVF 58
Query: 153 SKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYD 212
+ + N ++I GY EN EA LF QM
Sbjct: 59 DEITQPNAYLWTSLIHGYVENRQYDEAFSLFIQMR------------------------- 93
Query: 213 EAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGAL 272
R+ I +FT SVL A A + + G+ ++ + G D V ++
Sbjct: 94 -----------REPISVLNFTISSVLKALARLTRFKGGQAVYGFVLKYGFAFDLIVQNSV 142
Query: 273 VEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGF-----------------EPNVYTWN 315
++++ R + + A+ AFDE+ + + M G+ E NV +W
Sbjct: 143 LDLFMRCRKVDTARQAFDEMCEKDIVSWNMMISGYGNNDRVDIARKFFDRMPERNVVSWT 202
Query: 316 AM--------------QLFSEMLSLDLTP---------------------------DIYT 334
+M LF M DL D +
Sbjct: 203 SMICGYVKAGDMAEAQVLFDSMPVKDLASWNVMVSGYMDIGDCVNARIIFGKMPIHDTGS 262
Query: 335 VGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS 394
I++S +E K + R + + G L D Y K G AR + ++
Sbjct: 263 WNIMISGFCKAGELESAKD---FFDRMPNKNVISWGIML-DGYIKNGDTNGARCLFDQMP 318
Query: 395 TPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSE 454
+LV+ + M+ YA +G + + F R +PD L +SAC G I
Sbjct: 319 MKNLVTWSTMIGGYARNGQPLKALELFERFKEQDIKPDETFILGIISACSQLGIIDAAES 378
Query: 455 FFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
+ L+ +T ++D+ ++ G + +A + ++ D + + ++ +HG
Sbjct: 379 IIHNYVGPSLLSDLRVFTSLIDMYAKCGSIEKALQMF-EMAHPKDLLCYSTMIAALANHG 437
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 122/284 (42%), Gaps = 14/284 (4%)
Query: 246 SLRKGKEIHA-LAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKE 304
+L+ K IHA L I + S FV L+ +Y R+ A FDEI L
Sbjct: 14 TLKSLKSIHARLLIESSVASSEFVINKLLRLYSRFGATDYAHKVFDEITQPNAYLWTSLI 73
Query: 305 DGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYD 364
G+ N A LF +M ++ +T+ +L A + L + G+ V+ + ++ G+
Sbjct: 74 HGYVENRQYDEAFSLFIQMRREPISVLNFTISSVLKALARLTRFKGGQAVYGFVLKYGFA 133
Query: 365 SDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRI 424
D+ + +++D++ +C + AR A+ + D+VS N M++ Y + F R+
Sbjct: 134 FDLIVQNSVLDLFMRCRKVDTARQAFDEMCEKDIVSWNMMISGYGNNDRVDIARKFFDRM 193
Query: 425 LASGFRPDH--ISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAG 482
P+ +S+ S + V AG + FD M D L + MV G
Sbjct: 194 ------PERNVVSWTSMICGYVKAGDMAEAQVLFDSMPVKD----LASWNVMVSGYMDIG 243
Query: 483 ELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRL 526
+ A K+P+ D+ W ++ G G LE + DR+
Sbjct: 244 DCVNARIIFGKMPIH-DTGSWNIMISGFCKAGELESAKDFFDRM 286
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 81/170 (47%), Gaps = 6/170 (3%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGS++ A ++F+M +D + +++++ A A +GL +A+ ++M N P+ V
Sbjct: 401 MYAKCGSIEKALQMFEMAHPKDLLCYSTMIAALANHGLGRDAIFLFDKMQRA-NIKPDSV 459
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
++ V+ G +E +M E G++P+ + + V+ R+ L +E +
Sbjct: 460 TFLGVLTACNHGGLVDEGRKYFKQMTEEFGIQPSEKHYACVVDLLGRVGCL---EEAYNL 516
Query: 120 ITRNGFMSNPFVVNGLVDVYR-RCGDMLSALKIFSKFSIKNEVSCNTIIV 168
I + V L+ R C L+ + F I+ + S N I++
Sbjct: 517 IRNMPIAPHSVVWGALLAACRVHCNVQLAEVAAAELFKIEPDNSGNYILL 566
>gi|356577722|ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Glycine max]
Length = 820
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 172/549 (31%), Positives = 300/549 (54%), Gaps = 41/549 (7%)
Query: 55 ETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGK 114
+ NLV+W+ +I ++Q G ++A+ + R+ P+ TL+S+L AC L+ SLGK
Sbjct: 209 QHKNLVTWTLMITRYSQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGK 268
Query: 115 EFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
+ H ++ R+G S+ FV LVD+Y + +
Sbjct: 269 QLHSWVIRSGLASDVFVGCTLVDMYAK-------------------------------SA 297
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTF 234
V +R++F+ M H ++SW ++ISGYV + EA +F ++L + P FTF
Sbjct: 298 AVENSRKIFNTMLH----HNVMSWTALISGYVQSRQEQEAIKLFCNML-HGHVTPNCFTF 352
Query: 235 GSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIEN 294
SVL ACA + GK++H I LGL + VG +L+ MY R + A+ AF+ +
Sbjct: 353 SSVLKACASLPDFGIGKQLHGQTIKLGLSTINCVGNSLINMYARSGTMECARKAFNILFE 412
Query: 295 IENLLGKMKEDGFEPNVYTWNAMQLFS-EMLSLDLTPDIYTVGIILSACSSLATMERGKQ 353
+NL+ + N ++ + F+ E+ + +T +LS + + T+ +G+Q
Sbjct: 413 -KNLISY--NTAADANAKALDSDESFNHEVEHTGVGASPFTYACLLSGAACIGTIVKGEQ 469
Query: 354 VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGH 413
+HA ++ G+ +++ I AL+ MY+KCG+ + A + + ++++ ++++ +A HG
Sbjct: 470 IHALIVKSGFGTNLCINNALISMYSKCGNKEAALQVFNDMGYRNVITWTSIISGFAKHGF 529
Query: 414 GKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYT 472
+ + F +L G +P+ +++++ LSAC H G I + F+ M Y + + P ++HY
Sbjct: 530 ATKALELFYEMLEIGVKPNEVTYIAVLSACSHVGLIDEAWKHFNSMHYNHSISPRMEHYA 589
Query: 473 CMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPN 532
CMVDLL R+G L EA EFI +P D+++W LG C H N + G+ AA +++E EP+
Sbjct: 590 CMVDLLGRSGLLLEAIEFINSMPFDADALVWRTFLGSCRVHRNTKLGEHAAKKILEREPH 649
Query: 533 NTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDR 592
+ Y++L+NL+A GRW D+A R+ MK +++ K G SWIE +++HKF D SH +
Sbjct: 650 DPATYILLSNLYASEGRWDDVAALRKSMKQKKLIKETGYSWIEVDNQVHKFHVGDTSHPQ 709
Query: 593 SEEIYTIID 601
+ +IY +D
Sbjct: 710 ARKIYDELD 718
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 122/498 (24%), Positives = 216/498 (43%), Gaps = 47/498 (9%)
Query: 22 DCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGM 81
D V NS++T + G AL M + +LVSWSA+I F N + A+
Sbjct: 73 DSVLLNSLITLYSKCGDWENALSIFRNMG---HHKRDLVSWSAIISCFANNSMESRALLT 129
Query: 82 LFRM---QAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVN-GLVD 137
M + PN +++L +C+ + G ++ + G+ + V L+D
Sbjct: 130 FLHMLQCSRNIIYPNEYCFTALLRSCSNPLFFTTGLAIFAFLLKTGYFDSHVCVGCALID 189
Query: 138 VYRRCG-DMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGII 196
++ + G D+ SA +F K KN V+ +I Y + G + +A +LF ++
Sbjct: 190 MFTKGGLDIQSARMVFDKMQHKNLVTWTLMITRYSQLGLLDDAVDLFCRL---------- 239
Query: 197 SWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHAL 256
++S Y P FT S+L AC ++ GK++H+
Sbjct: 240 ----LVSEYT----------------------PDKFTLTSLLSACVELEFFSLGKQLHSW 273
Query: 257 AIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNA 316
I GL SD FVG LV+MY + + ++ F+ + + + G+ + A
Sbjct: 274 VIRSGLASDVFVGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQSRQEQEA 333
Query: 317 MQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDM 376
++LF ML +TP+ +T +L AC+SL GKQ+H I+ G + +G +L++M
Sbjct: 334 IKLFCNMLHGHVTPNCFTFSSVLKACASLPDFGIGKQLHGQTIKLGLSTINCVGNSLINM 393
Query: 377 YAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISF 436
YA+ G+++ AR A+ + +L+S N A A E H G P +
Sbjct: 394 YARSGTMECARKAFNILFEKNLISYNTAADANAKALDSDESFNHEVEHTGVGASPFTYAC 453
Query: 437 LSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPM 496
L + +AC+ G+I G + L+ +L ++ + S+ G A + +
Sbjct: 454 LLSGAACI--GTIVKGEQIHALIVKSGFGTNLCINNALISMYSKCGNKEAALQVFNDMGY 511
Query: 497 APDSVMWGALLGGCVSHG 514
+ + W +++ G HG
Sbjct: 512 R-NVITWTSIISGFAKHG 528
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/395 (26%), Positives = 184/395 (46%), Gaps = 45/395 (11%)
Query: 98 SSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSI 157
S +L AC R L LGK H + +G + ++N L+ +Y +CGD +AL IF
Sbjct: 43 SLLLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSLITLYSKCGDWENALSIFR---- 98
Query: 158 KNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSM 217
M H +R ++SW+++IS + +NS+ A
Sbjct: 99 ---------------------------NMGHH--KRDLVSWSAIISCFANNSMESRALLT 129
Query: 218 FRDLLM--RDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALG-LQSDTFVGGALVE 274
F +L R+ I P + F ++L +C++ G I A + G S VG AL++
Sbjct: 130 FLHMLQCSRNIIYPNEYCFTALLRSCSNPLFFTTGLAIFAFLLKTGYFDSHVCVGCALID 189
Query: 275 MYCR-YQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIY 333
M+ + D+ +A+M FD++++ + + + +A+ LF +L + TPD +
Sbjct: 190 MFTKGGLDIQSARMVFDKMQHKNLVTWTLMITRYSQLGLLDDAVDLFCRLLVSEYTPDKF 249
Query: 334 TVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRI 393
T+ +LSAC L GKQ+H++ IR G SDV +G LVDMYAK +++++R + +
Sbjct: 250 TLTSLLSACVELEFFSLGKQLHSWVIRSGLASDVFVGCTLVDMYAKSAAVENSRKIFNTM 309
Query: 394 STPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGS 453
+++S A+++ Y +E I F +L P+ +F S L AC G
Sbjct: 310 LHHNVMSWTALISGYVQSRQEQEAIKLFCNMLHGHVTPNCFTFSSVLKACASLPDFGIGK 369
Query: 454 EFFDLMAYYDVKPSLKHYTC----MVDLLSRAGEL 484
+ +K L C ++++ +R+G +
Sbjct: 370 QLHG----QTIKLGLSTINCVGNSLINMYARSGTM 400
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG+ + A +VF M R+ ++W S+++ A +G +ALE M + + PN V
Sbjct: 492 MYSKCGNKEAALQVFNDMGYRNVITWTSIISGFAKHGFATKALELFYEMLEIGVK-PNEV 550
Query: 61 SWSAVIGGFTQNGYDEEA 78
++ AV+ + G +EA
Sbjct: 551 TYIAVLSACSHVGLIDEA 568
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 94/236 (39%), Gaps = 44/236 (18%)
Query: 324 LSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSL 383
L L T + ++L AC +E GK +H I G D + +L+ +Y+KCG
Sbjct: 31 LDLTTTSPLIKSSLLLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSLITLYSKCGDW 90
Query: 384 KHARLAYKRIS--TPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASG---FRPDHISFLS 438
++A ++ + DLVS +A+++ +A + + F +L P+ F +
Sbjct: 91 ENALSIFRNMGHHKRDLVSWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPNEYCFTA 150
Query: 439 ALSACVHAGSIKTGSEFFDLM---AYYD-------------------------VKPSLKH 470
L +C + TG F + Y+D V ++H
Sbjct: 151 LLRSCSNPLFFTTGLAIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQH 210
Query: 471 -----YTCMVDLLSRAGELGEAYEFIKKIPMA---PDSVMWGALLGGCVSHGNLEF 518
+T M+ S+ G L +A + ++ ++ PD +LL CV LEF
Sbjct: 211 KNLVTWTLMITRYSQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACV---ELEF 263
>gi|356570738|ref|XP_003553542.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Glycine max]
Length = 777
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 196/604 (32%), Positives = 311/604 (51%), Gaps = 71/604 (11%)
Query: 14 VFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNG 73
V K + ++ N++++ G + A + +S T +L+SW+++I GFTQ G
Sbjct: 207 VIKSGYDHHLIAQNALISMYTKFGQIAHASDVFTMIS-----TKDLISWASMITGFTQLG 261
Query: 74 YDEEAIGMLFRMQAEGL-EPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVV 132
Y+ EA+ + M +G+ +PN SV AC L K G++ G + G N F
Sbjct: 262 YEIEALYLFRDMFRQGVYQPNEFIFGSVFSACRSLLKPEFGRQIQGMCAKFGLGRNVFAG 321
Query: 133 NGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQ 192
L D+Y + G + SA + F + E+ +L
Sbjct: 322 CSLCDMYAKFGFLPSAKRAFYQI----------------------ESPDL---------- 349
Query: 193 RGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKE 252
+SWN++I+ + NS +EA F ++ G+ P TF ++L AC +L +G +
Sbjct: 350 ---VSWNAIIAA-LANSDVNEAIYFFCQMIHM-GLMPDDITFLNLLCACGSPMTLNQGMQ 404
Query: 253 IHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVY 312
IH+ I +GL V +L+ MY + +L A F +I E+G N+
Sbjct: 405 IHSYIIKMGLDKVAAVCNSLLTMYTKCSNLHDAFNVFKDIS----------ENG---NLV 451
Query: 313 TWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYA 358
+WNA+ +LF ML + PD T+ IL C+ L ++E G QVH ++
Sbjct: 452 SWNAILSACSQHKQPGEAFRLFKLMLFSENKPDNITITTILGTCAELVSLEVGNQVHCFS 511
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGI 418
++ G DV + L+DMYAKCG LKHAR + PD+VS ++++ YA G G+E +
Sbjct: 512 VKSGLVVDVSVSNRLIDMYAKCGLLKHARYVFDSTQNPDIVSWSSLIVGYAQFGLGQEAL 571
Query: 419 AHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDL 477
FR + G +P+ +++L LSAC H G ++ G ++ M + P+ +H +CMVDL
Sbjct: 572 NLFRMMRNLGVQPNEVTYLGVLSACSHIGLVEEGWHLYNTMEIELGIPPTREHVSCMVDL 631
Query: 478 LSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNY 537
L+RAG L EA FIKK PD MW LL C +HGN++ + AA+ +++L+P+N+
Sbjct: 632 LARAGCLYEAENFIKKTGFDPDITMWKTLLASCKTHGNVDIAERAAENILKLDPSNSAAL 691
Query: 538 VMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
V+L+N+ A AG W ++AR R MK + K PG SWIE +D+IH F + D SH + IY
Sbjct: 692 VLLSNIHASAGNWKEVARLRNLMKQMGVQKVPGQSWIEVKDQIHVFFSEDSSHPQRGNIY 751
Query: 598 TIID 601
T+++
Sbjct: 752 TMLE 755
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 150/553 (27%), Positives = 249/553 (45%), Gaps = 112/553 (20%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKCGSL DA+K F M R ++V
Sbjct: 124 MYGKCGSLKDARKAFDTMQLR------------------------------------SVV 147
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ +I G++QNG + +AI M +M G P+ T S++ AC + LG + HG++
Sbjct: 148 SWTIMISGYSQNGQENDAIIMYIQMLRSGYFPDQLTFGSIIKACCIAGDIDLGGQLHGHV 207
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
++G+ + N L+ +Y + G + A +F+ S K+ +S ++I G+ + G EA
Sbjct: 208 IKSGYDHHLIAQNALISMYTKFGQIAHASDVFTMISTKDLISWASMITGFTQLGYEIEA- 266
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LY +FRD+ + +P F FGSV A
Sbjct: 267 -----------------------------LY-----LFRDMFRQGVYQPNEFIFGSVFSA 292
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C + G++I + GL + F G +L +MY ++ L +A+ AF +IE+
Sbjct: 293 CRSLLKPEFGRQIQGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAKRAFYQIES------ 346
Query: 301 KMKEDGFEPNVYTWN-------------AMQLFSEMLSLDLTPDIYTVGIILSACSSLAT 347
P++ +WN A+ F +M+ + L PD T +L AC S T
Sbjct: 347 --------PDLVSWNAIIAALANSDVNEAIYFFCQMIHMGLMPDDITFLNLLCACGSPMT 398
Query: 348 MERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNAMLT 406
+ +G Q+H+Y I+ G D + +L+ MY KC +L A +K IS +LVS NA+L+
Sbjct: 399 LNQGMQIHSYIIKMGLDKVAAVCNSLLTMYTKCSNLHDAFNVFKDISENGNLVSWNAILS 458
Query: 407 AYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEF--FDLMAYYDV 464
A + H E F+ +L S +PD+I+ + L C S++ G++ F + + V
Sbjct: 459 ACSQHKQPGEAFRLFKLMLFSENKPDNITITTILGTCAELVSLEVGNQVHCFSVKSGLVV 518
Query: 465 KPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAAD 524
S+ + ++D+ ++ G L A ++ PD V W +L+ G G GQ A +
Sbjct: 519 DVSVSNR--LIDMYAKCGLLKHA-RYVFDSTQNPDIVSWSSLIVGYAQFG---LGQEALN 572
Query: 525 -----RLIELEPN 532
R + ++PN
Sbjct: 573 LFRMMRNLGVQPN 585
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 149/317 (47%), Gaps = 2/317 (0%)
Query: 194 GIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEI 253
G +S NS I+ Y EA F L I+ T+ ++++AC ++ SL+ GK I
Sbjct: 43 GELSTNSYINLMCKQQHYREALDTFNFHLKNSSIQLEPSTYVNLILACTNVRSLKYGKRI 102
Query: 254 HALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYT 313
H + Q D + ++ MY + L A+ AFD ++ + + G+ N
Sbjct: 103 HDHILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQLRSVVSWTIMISGYSQNGQE 162
Query: 314 WNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTAL 373
+A+ ++ +ML PD T G I+ AC ++ G Q+H + I+ GYD + AL
Sbjct: 163 NDAIIMYIQMLRSGYFPDQLTFGSIIKACCIAGDIDLGGQLHGHVIKSGYDHHLIAQNAL 222
Query: 374 VDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASG-FRPD 432
+ MY K G + HA + IST DL+S +M+T + G+ E + FR + G ++P+
Sbjct: 223 ISMYTKFGQIAHASDVFTMISTKDLISWASMITGFTQLGYEIEALYLFRDMFRQGVYQPN 282
Query: 433 HISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIK 492
F S SAC + G + + A + + ++ + D+ ++ G L A
Sbjct: 283 EFIFGSVFSACRSLLKPEFGRQIQGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAKRAFY 342
Query: 493 KIPMAPDSVMWGALLGG 509
+I +PD V W A++
Sbjct: 343 QIE-SPDLVSWNAIIAA 358
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 98/190 (51%), Gaps = 3/190 (1%)
Query: 325 SLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLK 384
S+ L P Y V +IL AC+++ +++ GK++H + ++ D+ + +++MY KCGSLK
Sbjct: 75 SIQLEPSTY-VNLIL-ACTNVRSLKYGKRIHDHILKSNCQPDLVLQNHILNMYGKCGSLK 132
Query: 385 HARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACV 444
AR A+ + +VS M++ Y+ +G + I + ++L SG+ PD ++F S + AC
Sbjct: 133 DARKAFDTMQLRSVVSWTIMISGYSQNGQENDAIIMYIQMLRSGYFPDQLTFGSIIKACC 192
Query: 445 HAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWG 504
AG I G + + L ++ + ++ G++ A + I D + W
Sbjct: 193 IAGDIDLGGQLHGHVIKSGYDHHLIAQNALISMYTKFGQIAHASDVFTMIS-TKDLISWA 251
Query: 505 ALLGGCVSHG 514
+++ G G
Sbjct: 252 SMITGFTQLG 261
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 87/205 (42%), Gaps = 24/205 (11%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG L A+ VF D VSW+S++ A GL EAL M +L + PN V
Sbjct: 529 MYAKCGLLKHARYVFDSTQNPDIVSWSSLIVGYAQFGLGQEALNLFRMMRNLGVQ-PNEV 587
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
++ V+ + G EE + M+ E G+ P +S ++ AR L E +
Sbjct: 588 TYLGVLSACSHIGLVEEGWHLYNTMEIELGIPPTREHVSCMVDLLARAGCL---YEAENF 644
Query: 120 ITRNGFMSNPFV-----------VNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIV 168
I + GF +P + +G VD+ R + + K N + +
Sbjct: 645 IKKTGF--DPDITMWKTLLASCKTHGNVDIAERAAENI------LKLDPSNSAALVLLSN 696
Query: 169 GYCENGNVAEARELFDQMEHLGVQR 193
+ GN E L + M+ +GVQ+
Sbjct: 697 IHASAGNWKEVARLRNLMKQMGVQK 721
>gi|147765322|emb|CAN64903.1| hypothetical protein VITISV_019802 [Vitis vinifera]
Length = 625
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 179/552 (32%), Positives = 299/552 (54%), Gaps = 41/552 (7%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
N+ W+++I G +N EA + +M + + P+ TLS++ + L L GK H
Sbjct: 88 NVFLWNSLINGCVKNRLYNEAFQLFNQMCSSDVLPDDFTLSTLSKVSSELGALFSGKSIH 147
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
G R GF+S+ V N ++ +Y +CG+ + K+F + +I+N S N +I GY +GN
Sbjct: 148 GKSIRTGFVSDTVVANSIMSMYCKCGNFDESRKVFDEMTIRNSGSWNVLIAGYAVSGNC- 206
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
+ +E + + + M D + P ++T S+
Sbjct: 207 -------------------------------NFREETWEFVKQMQM-DEVRPDAYTISSL 234
Query: 238 LIAC-ADMNSLRKGKEIHALAI----ALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI 292
L C DM G+E+H + LGL SD +G L++MY R +V + FD +
Sbjct: 235 LPLCDGDMGKWDYGRELHCYIVKNELVLGLDSDVHLGCCLIDMYSRSNKVVVGRRVFDRM 294
Query: 293 ENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLD-LTPDIYTVGIILSACSSLATMERG 351
+ +G+ N + A+ LF +M +D + P+ ++ +L ACSS + + G
Sbjct: 295 KCRNVFSWTAMINGYVENGDSDEALSLFRDMQVIDGVEPNRVSLVSVLPACSSFSGLLSG 354
Query: 352 KQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNAMLTAYAM 410
+Q+H +A+R +++V + AL+DMY+KCGSL AR ++ S D +S ++M++ Y +
Sbjct: 355 RQIHGFAVRKELNNEVSLCNALIDMYSKCGSLDSARRVFEDDSLCKDAISWSSMISGYGL 414
Query: 411 HGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFF-DLMAYYDVKPSLK 469
HG G+E I + ++L +G RPD I+ + LSAC +G + G + ++ Y ++P+L+
Sbjct: 415 HGKGQEAILLYDKMLQAGIRPDMITTVGILSACGRSGLVNEGLNIYSSVINDYGIEPTLE 474
Query: 470 HYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIEL 529
C+VD+L RAG+L A +FIK IP+ P +WGAL+ + HG+LE ++A LI+L
Sbjct: 475 ICACIVDMLGRAGQLDRALDFIKAIPVEPGPSVWGALVSCSIIHGDLEMQELAYRFLIQL 534
Query: 530 EPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRS 589
EP N NYV ++NL+A + RW +A R+ MKD+R+ K PGCSWI ++ H F +D++
Sbjct: 535 EPKNPSNYVSISNLYASSRRWDAVAEVRRMMKDKRLRKVPGCSWISINNKTHCFYVADKA 594
Query: 590 HDRSEEIYTIID 601
H S IY ++D
Sbjct: 595 HPSSTSIYNMLD 606
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 96/384 (25%), Positives = 181/384 (47%), Gaps = 22/384 (5%)
Query: 158 KNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSM 217
+N +I Y + +R +FD ++H + + WNS+I+G V N LY+EAF +
Sbjct: 56 QNSFLATKLIFAYAICQHPYHSRLVFDSLQH----KNVFLWNSLINGCVKNRLYNEAFQL 111
Query: 218 FRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYC 277
F + D + P FT ++ +++ +L GK IH +I G SDT V +++ MYC
Sbjct: 112 FNQMCSSD-VLPDDFTLSTLSKVSSELGALFSGKSIHGKSIRTGFVSDTVVANSIMSMYC 170
Query: 278 RYQDLVAAQMAFDEIENIEN-------LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTP 330
+ + ++ FDE+ I N + G TW + +M ++ P
Sbjct: 171 KCGNFDESRKVFDEM-TIRNSGSWNVLIAGYAVSGNCNFREETW---EFVKQMQMDEVRP 226
Query: 331 DIYTVGIILSACS-SLATMERGKQVHAYAIR----CGYDSDVHIGTALVDMYAKCGSLKH 385
D YT+ +L C + + G+++H Y ++ G DSDVH+G L+DMY++ +
Sbjct: 227 DAYTISSLLPLCDGDMGKWDYGRELHCYIVKNELVLGLDSDVHLGCCLIDMYSRSNKVVV 286
Query: 386 ARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRI-LASGFRPDHISFLSALSACV 444
R + R+ ++ S AM+ Y +G E ++ FR + + G P+ +S +S L AC
Sbjct: 287 GRRVFDRMKCRNVFSWTAMINGYVENGDSDEALSLFRDMQVIDGVEPNRVSLVSVLPACS 346
Query: 445 HAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWG 504
+ +G + ++ + ++D+ S+ G L A + + D++ W
Sbjct: 347 SFSGLLSGRQIHGFAVRKELNNEVSLCNALIDMYSKCGSLDSARRVFEDDSLCKDAISWS 406
Query: 505 ALLGGCVSHGNLEFGQIAADRLIE 528
+++ G HG + + D++++
Sbjct: 407 SMISGYGLHGKGQEAILLYDKMLQ 430
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 108/420 (25%), Positives = 181/420 (43%), Gaps = 76/420 (18%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG+ D+++KVF M R+ SWN ++ A +G C
Sbjct: 168 MYCKCGNFDESRKVFDEMTIRNSGSWNVLIAGYAVSG------NC--------------- 206
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPAC-ARLQKLSLGKEFHGY 119
+ EE + +MQ + + P+A T+SS+LP C + K G+E H Y
Sbjct: 207 ------------NFREETWEFVKQMQMDEVRPDAYTISSLLPLCDGDMGKWDYGRELHCY 254
Query: 120 ITRN----GFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGN 175
I +N G S+ + L+D+Y R ++ ++F + +N S +I GY ENG+
Sbjct: 255 IVKNELVLGLDSDVHLGCCLIDMYSRSNKVVVGRRVFDRMKCRNVFSWTAMINGYVENGD 314
Query: 176 VAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFG 235
EA S+FRD+ + DG+EP +
Sbjct: 315 SDEA-----------------------------------LSLFRDMQVIDGVEPNRVSLV 339
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
SVL AC+ + L G++IH A+ L ++ + AL++MY + L +A+ F++
Sbjct: 340 SVLPACSSFSGLLSGRQIHGFAVRKELNNEVSLCNALIDMYSKCGSLDSARRVFEDDSLC 399
Query: 296 ENLLG-KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV 354
++ + G+ + A+ L+ +ML + PD+ T ILSAC + G +
Sbjct: 400 KDAISWSSMISGYGLHGKGQEAILLYDKMLQAGIRPDMITTVGILSACGRSGLVNEGLNI 459
Query: 355 HAYAIR-CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST-PDLVSQNAMLTAYAMHG 412
++ I G + + I +VDM + G L A K I P A+++ +HG
Sbjct: 460 YSSVINDYGIEPTLEICACIVDMLGRAGQLDRALDFIKAIPVEPGPSVWGALVSCSIIHG 519
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 145/321 (45%), Gaps = 10/321 (3%)
Query: 246 SLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKED 305
SL+ ++ H+ ++LGL ++F+ L+ Y Q +++ FD +++ L +
Sbjct: 38 SLKLTRQSHSRILSLGLSQNSFLATKLIFAYAICQHPYHSRLVFDSLQHKNVFLWNSLIN 97
Query: 306 GFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDS 365
G N A QLF++M S D+ PD +T+ + S L + GK +H +IR G+ S
Sbjct: 98 GCVKNRLYNEAFQLFNQMCSSDVLPDDFTLSTLSKVSSELGALFSGKSIHGKSIRTGFVS 157
Query: 366 DVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGH---GKEGIAHFR 422
D + +++ MY KCG+ +R + ++ + S N ++ YA+ G+ +E +
Sbjct: 158 DTVVANSIMSMYCKCGNFDESRKVFDEMTIRNSGSWNVLIAGYAVSGNCNFREETWEFVK 217
Query: 423 RILASGFRPDHISFLSALSACV-HAGSIKTGSEFFDLMAYYDVKPSLKHYT----CMVDL 477
++ RPD + S L C G G E + ++ L C++D+
Sbjct: 218 QMQMDEVRPDAYTISSLLPLCDGDMGKWDYGRELHCYIVKNELVLGLDSDVHLGCCLIDM 277
Query: 478 LSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNY 537
SR+ ++ ++ + W A++ G V +G+ + ++ R +++ N
Sbjct: 278 YSRSNKVVVGRRVFDRMK-CRNVFSWTAMINGYVENGDSD-EALSLFRDMQVIDGVEPNR 335
Query: 538 VMLANLFAYAGRWSDLARTRQ 558
V L ++ +S L RQ
Sbjct: 336 VSLVSVLPACSSFSGLLSGRQ 356
>gi|449518887|ref|XP_004166467.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g35030, mitochondrial-like [Cucumis sativus]
Length = 649
Score = 324 bits (830), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 193/602 (32%), Positives = 318/602 (52%), Gaps = 60/602 (9%)
Query: 3 GKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSW 62
GK G + +A++VF+ MP+RD VSW +V+T G++ EA +R ++ N+V+W
Sbjct: 77 GKEGKIGEARQVFEEMPDRDVVSWTAVITGYIKCGMIEEAKTLFDR----NDAIKNVVTW 132
Query: 63 SAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITR 122
+A++ G+ + EEA + M + N + ++++ AR + + +
Sbjct: 133 TALVSGYVRWNRIEEARRLFDAMPVK----NVISWNTMIEGYARKGWIDQALDLFEXMPE 188
Query: 123 NGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAREL 182
+S V+ + RR D A ++F++ ++ +S T++ G +NG + +AR L
Sbjct: 189 RNVVSWNTVITAFMQ--RRRVD--EAQELFNRMPERDVISWTTMVAGLSKNGRIDDARLL 244
Query: 183 FDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACA 242
FD+M R ++SWN+MI GY N DEAF +F + R+ + G +
Sbjct: 245 FDKMP----VRNVVSWNTMIIGYAQNMRLDEAFKLFEQMPERELSSWNTMITGFI----- 295
Query: 243 DMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKM 302
+ GK A+ + + V V + QD G+
Sbjct: 296 -----QNGKLERAVDFFYKMSNKNVVTWTAV-ISGHVQD------------------GRS 331
Query: 303 KEDGFEPNVYTWNAMQLFSEMLSLD-LTPDIYTVGIILSACSSLATMERGKQVHAYAIRC 361
+E A+++FSEM + + + P+ T +L ACS LA + G+Q+H +
Sbjct: 332 EE-----------ALKIFSEMQAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQIISKT 380
Query: 362 GYDSDVHIGTALVDMYAKCGSLKHARLAYK--RISTPDLVSQNAMLTAYAMHGHGKEGIA 419
Y + +AL++MY+KCG L+ AR + I D+VS N M+ AYA HGHG + I+
Sbjct: 381 VYQEVADVVSALINMYSKCGELELARKIFDDGSIGHRDVVSWNGMIAAYAHHGHGHKAIS 440
Query: 420 HFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFD-LMAYYDVKPSLKHYTCMVDLL 478
F + A GFRPD++++++ LSAC HAG + G + F+ L+ +K H+TC+VDL
Sbjct: 441 LFDEMQALGFRPDNVTYIALLSACSHAGLVDEGLKLFENLVRDRSIKLREDHFTCLVDLF 500
Query: 479 SRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYV 538
RAG L EA++FIK + + P + +W ALL GC HG+++ G++ A++L+E EP N G Y+
Sbjct: 501 GRAGRLQEAFDFIKGLEVKPSASVWAALLAGCNVHGHIDLGKLTAEKLLETEPENAGTYL 560
Query: 539 MLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYT 598
+L+N++A G+W + A R KMKD+ + K PGCSWIE + +H F D SH E IY
Sbjct: 561 VLSNIYASTGKWREAAGVRMKMKDKGLKKQPGCSWIEVGNTVHVFVVGDNSHREFENIYL 620
Query: 599 II 600
++
Sbjct: 621 LL 622
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 113/431 (26%), Positives = 198/431 (45%), Gaps = 51/431 (11%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y + +++A+++F MP ++ +SWN+++ A G + +AL+ E M N+VS
Sbjct: 139 YVRWNRIEEARRLFDAMPVKNVISWNTMIEGYARKGWIDQALDLFEXMPE-----RNVVS 193
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W+ VI F Q +EA + RM + + T+ + L R+ L F
Sbjct: 194 WNTVITAFMQRRRVDEAQELFNRMPERDV-ISWTTMVAGLSKNGRIDDARL--LFDKMPV 250
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
RN N ++ Y + + A K+F + + S NT+I G+ +NG + A +
Sbjct: 251 RNVVSWNTMIIG-----YAQNMRLDEAFKLFEQMPERELSSWNTMITGFIQNGKLERAVD 305
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
F +M + + +++W ++ISG+V + +EA +F ++ + ++P TF SVL AC
Sbjct: 306 FFYKMSN----KNVVTWTAVISGHVQDGRSEEALKIFSEMQAANNVKPNEGTFVSVLGAC 361
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK 301
+ + +L +G++IH + Q V AL+ MY + +L A+ FD+ G
Sbjct: 362 SKLAALCEGQQIHQIISKTVYQEVADVVSALINMYSKCGELELARKIFDD--------GS 413
Query: 302 MKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSSLAT 347
+ +V +WN M LF EM +L PD T +LSACS
Sbjct: 414 IG----HRDVVSWNGMIAAYAHHGHGHKAISLFDEMQALGFRPDNVTYIALLSACSHAGL 469
Query: 348 MERGKQVHAYAIRCGYDSDVHIG----TALVDMYAKCGSLKHARLAYKRIST-PDLVSQN 402
++ G ++ +R D + + T LVD++ + G L+ A K + P
Sbjct: 470 VDEGLKLFENLVR---DRSIKLREDHFTCLVDLFGRAGRLQEAFDFIKGLEVKPSASVWA 526
Query: 403 AMLTAYAMHGH 413
A+L +HGH
Sbjct: 527 ALLAGCNVHGH 537
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 92/476 (19%), Positives = 190/476 (39%), Gaps = 87/476 (18%)
Query: 127 SNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQM 186
SN N L+ + G + A ++F + ++ VS +I GY + G + EA+ LFD+
Sbjct: 64 SNVARSNWLITQLGKEGKIGEARQVFEEMPDRDVVSWTAVITGYIKCGMIEEAKTLFDRN 123
Query: 187 EHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNS 246
+ + + +++W +++SGYV + +EA +F + +++ I + G
Sbjct: 124 DAI---KNVVTWTALVSGYVRWNRIEEARRLFDAMPVKNVISWNTMIEGYA--------- 171
Query: 247 LRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDG 306
RKG AL + + V + ++ A M ++ + L +M
Sbjct: 172 -RKGWIDQALDLFEXMPERNVVS---------WNTVITAFMQRRRVDEAQELFNRMP--- 218
Query: 307 FEPNVYTWNAM--------QLFSEMLSLDLTPDIYTVG---IILSACSSLATMERGKQVH 355
E +V +W M ++ L D P V +I+ ++ E K
Sbjct: 219 -ERDVISWTTMVAGLSKNGRIDDARLLFDKMPVRNVVSWNTMIIGYAQNMRLDEAFKLFE 277
Query: 356 AYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGK 415
R ++ ++ + + G L+ A + ++S ++V+ A+++ + G +
Sbjct: 278 QMPER-----ELSSWNTMITGFIQNGKLERAVDFFYKMSNKNVVTWTAVISGHVQDGRSE 332
Query: 416 EGIAHFRRI-LASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCM 474
E + F + A+ +P+ +F+S L AC ++ G + +++ + + +
Sbjct: 333 EALKIFSEMQAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVSAL 392
Query: 475 VDLLSRAGELGEA------------------------------------YEFIKKIPMAP 498
+++ S+ GEL A ++ ++ + P
Sbjct: 393 INMYSKCGELELARKIFDDGSIGHRDVVSWNGMIAAYAHHGHGHKAISLFDEMQALGFRP 452
Query: 499 DSVMWGALLGGC-----VSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGR 549
D+V + ALL C V G F + DR I+L + ++ L +LF AGR
Sbjct: 453 DNVTYIALLSACSHAGLVDEGLKLFENLVRDRSIKLRED---HFTCLVDLFGRAGR 505
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 63/174 (36%), Gaps = 39/174 (22%)
Query: 1 MYGKCGSLDDAKKVFK--MMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPN 58
MY KCG L+ A+K+F + RD VSWN ++ A
Sbjct: 395 MYSKCGELELARKIFDDGSIGHRDVVSWNGMIAA-------------------------- 428
Query: 59 LVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLG-KEFH 117
+ +G+ +AI + MQA G P+ T ++L AC+ + G K F
Sbjct: 429 ----------YAHHGHGHKAISLFDEMQALGFRPDNVTYIALLSACSHAGLVDEGLKLFE 478
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYC 171
+ LVD++ R G + A +K S ++ C
Sbjct: 479 NLVRDRSIKLREDHFTCLVDLFGRAGRLQEAFDFIKGLEVKPSASVWAALLAGC 532
>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
Length = 672
Score = 324 bits (830), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 180/549 (32%), Positives = 302/549 (55%), Gaps = 14/549 (2%)
Query: 57 PNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEF 116
PN + W+ + G + A+ + M + GL PN T +L +CA+ + G++
Sbjct: 38 PNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKSCAKSKTFKEGQQI 97
Query: 117 HGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNV 176
HG++ + GF + +V L+ +Y + G + A K+F + S ++ VS +I GY G +
Sbjct: 98 HGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSYTALITGYASRGYI 157
Query: 177 AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGS 236
A+++FD++ + ++SWN+MISGY + Y +A +F+++ M+ ++P T +
Sbjct: 158 ESAQKMFDEIP----IKDVVSWNAMISGYAETGNYKKALELFKEM-MKTNVKPDESTMAT 212
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
V+ ACA S+ G+++H+ G S+ + AL+++Y + ++ A + + N +
Sbjct: 213 VVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACELLEGLSNKD 272
Query: 297 NLLGKMKEDGF-EPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVH 355
+ G+ N+Y A+ LF EML TP+ T+ IL AC+ L ++ G+ +H
Sbjct: 273 VISWNTLIGGYTHMNLYK-EALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIH 331
Query: 356 AYAIR----CGYDSDVHIGTALVDMYAKCGSLKHA-RLAYKRISTPDLVSQNAMLTAYAM 410
Y + + + T+L+DMYAKCG + A +++ L + NAM+ +AM
Sbjct: 332 VYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNAMIFGFAM 391
Query: 411 HGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLK 469
HG F R+ +G PD I+F+ LSAC H+G + G F M Y++ P L+
Sbjct: 392 HGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMRQDYNITPKLE 451
Query: 470 HYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIEL 529
HY CM+DLL +G EA E I +PM PD V+W +LL C HGNLE G+ A +LI++
Sbjct: 452 HYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKI 511
Query: 530 EPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKS-PGCSWIEDRDEIHKFRASDR 588
EP N G+YV+L+N++A AG+W+++ + R + D+ M K PGCS IE +H+F D+
Sbjct: 512 EPENPGSYVLLSNIYATAGKWNEVXKIRTLLNDKGMKKKVPGCSSIEIDSVVHEFIIGDK 571
Query: 589 SHDRSEEIY 597
H ++ EIY
Sbjct: 572 LHPQNREIY 580
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 117/447 (26%), Positives = 210/447 (46%), Gaps = 78/447 (17%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY + G L+DA+KVF RD VS+ +++T A+ G + A + + + D +V
Sbjct: 119 MYAQNGRLEDAQKVFDRSSHRDVVSYTALITGYASRGYIESAQKMFDEIPIKD-----VV 173
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A+I G+ + G ++A+ + M ++P+ T+++V+ ACA+ + LG++ H +I
Sbjct: 174 SWNAMISGYAETGNYKKALELFKEMMKTNVKPDESTMATVVSACAQSGSIELGRQVHSWI 233
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+GF SN +VN L+D+Y +CG++ +A ++ S K+ +S NT+I GY
Sbjct: 234 NDHGFGSNLKIVNALIDLYSKCGEVETACELLEGLSNKDVISWNTLIGGYT--------- 284
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
H+ +LY EA +F+++L R G P T S+L A
Sbjct: 285 -------HM-------------------NLYKEALLLFQEML-RSGETPNDVTMLSILPA 317
Query: 241 CADMNSLRKGKEIHALA----IALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
CA + ++ G+ IH + + + + + +L++MY + D+ AA D
Sbjct: 318 CAHLGAIDIGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSD------ 371
Query: 297 NLLGKMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSAC 342
F ++ TWNAM +FS M + PD T +LSAC
Sbjct: 372 -------SSAFNRSLSTWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSAC 424
Query: 343 SSLATMERGKQVHAYAIRCGYDSDV---HIGTALVDMYAKCGSLKHARLAYKRIST-PDL 398
S ++ G+ + ++R Y+ H G ++D+ G K A + PD
Sbjct: 425 SHSGMLDLGRNIFR-SMRQDYNITPKLEHYG-CMIDLLGHSGLFKEAEEMINTMPMEPDG 482
Query: 399 VSQNAMLTAYAMHGHGKEGIAHFRRIL 425
V ++L A +HG+ + G + ++++
Sbjct: 483 VIWCSLLKACKIHGNLELGESFAKKLI 509
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 124/254 (48%), Gaps = 47/254 (18%)
Query: 308 EPNVYTWN--------------AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ 353
EPN WN A++L+ M+SL L P+ +T +L +C+ T + G+Q
Sbjct: 37 EPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKSCAKSKTFKEGQQ 96
Query: 354 VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKR--------------------- 392
+H + ++ G+D D+++ T+L+ MYA+ G L+ A+ + R
Sbjct: 97 IHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSYTALITGYASRGY 156
Query: 393 ----------ISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSA 442
I D+VS NAM++ YA G+ K+ + F+ ++ + +PD + + +SA
Sbjct: 157 IESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVKPDESTMATVVSA 216
Query: 443 CVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVM 502
C +GSI+ G + + + +LK ++DL S+ GE+ A E ++ + D +
Sbjct: 217 CAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACELLEGLS-NKDVIS 275
Query: 503 WGALLGGCVSHGNL 516
W L+GG +H NL
Sbjct: 276 WNTLIGG-YTHMNL 288
>gi|449508637|ref|XP_004163369.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570-like [Cucumis sativus]
Length = 594
Score = 324 bits (830), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 191/600 (31%), Positives = 300/600 (50%), Gaps = 74/600 (12%)
Query: 19 PERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETP--NLVSWSAVIGGFTQNGYDE 76
PE V +++ + GL EA +L NE P ++V+W+A+I GFT +
Sbjct: 39 PEGPSVWATNLIKSYFDKGLTREA-------CNLFNEIPERDVVTWTAMIVGFTSCNHYH 91
Query: 77 EAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLV 136
+A M M ++PNA T+SSVL AC ++ LS G H T++G + +V N L+
Sbjct: 92 QAWTMFSEMLRSEVQPNAFTMSSVLKACKGMKALSCGALAHSLATKHGIDRSVYVQNALL 151
Query: 137 DVYR-RCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGI 195
D+Y C M AL +F+ +K VS
Sbjct: 152 DMYAASCATMDDALSVFNDIPLKTAVS--------------------------------- 178
Query: 196 ISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHA 255
W ++I+G+ FR +L+ D + P SF+F ACA ++S GK+IHA
Sbjct: 179 --WTTLIAGFTHRGDGYSGLLAFRQMLLED-VGPNSFSFSIAARACASISSYSCGKQIHA 235
Query: 256 LAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWN 315
GL D V ++++MYCR L A+ F E+ E N+ TWN
Sbjct: 236 AVTKYGLHCDAPVMNSILDMYCRCNYLCDAKRCFGELT--------------EKNLITWN 281
Query: 316 -------------AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCG 362
++ LF +M S P+ +T I +AC++LA + G+QVH +R G
Sbjct: 282 TLIAGYERSDSSESLSLFFQMGSEGYKPNCFTFTSITAACANLAVLSCGQQVHGGIVRRG 341
Query: 363 YDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFR 422
+D +V + +L+DMYAKCGS+ + + + DLVS M+ Y HG+GKE + F
Sbjct: 342 FDKNVALINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMIGYGAHGYGKEAVKLFD 401
Query: 423 RILASGFRPDHISFLSALSACVHAGSIKTGSEFF-DLMAYYDVKPSLKHYTCMVDLLSRA 481
++ SG +PD I F+ L C HAG + G ++F ++ Y++ P + Y C+VDLL RA
Sbjct: 402 EMVQSGIQPDRIVFMGVLCGCSHAGLVDKGLKYFRSMLEDYNINPDQEIYRCVVDLLGRA 461
Query: 482 GELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLA 541
G + EA++ ++ +P PD +WGALLG C ++ G +AA R+++ PN G Y++L+
Sbjct: 462 GRVEEAFQLVENMPFEPDESVWGALLGACKAYKLSNLGNLAAQRVLDRRPNMAGTYLLLS 521
Query: 542 NLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
++A G+W + A+ R+ MK K G SWIE R+E++ F + E ++ +ID
Sbjct: 522 KIYAAEGKWGEFAKMRKLMKGMNKKKEVGKSWIEIRNEVYSFVVGAKMGPHIEWVHKVID 581
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/423 (22%), Positives = 169/423 (39%), Gaps = 75/423 (17%)
Query: 5 CGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSA 64
C ++DDA VF +P + VSW +
Sbjct: 158 CATMDDALSVFNDIPLKTAVSWTT------------------------------------ 181
Query: 65 VIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNG 124
+I GFT G + +M E + PN+ + S ACA + S GK+ H +T+ G
Sbjct: 182 LIAGFTHRGDGYSGLLAFRQMLLEDVGPNSFSFSIAARACASISSYSCGKQIHAAVTKYG 241
Query: 125 FMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFD 184
+ V+N ++D+Y RC + A + F + + KN ++ NT+I GY E + +E+ LF
Sbjct: 242 LHCDAPVMNSILDMYCRCNYLCDAKRCFGELTEKNLITWNTLIAGY-ERSDSSESLSLFF 300
Query: 185 QMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADM 244
QM +G +P FTF S+ ACA++
Sbjct: 301 QMG------------------------------------SEGYKPNCFTFTSITAACANL 324
Query: 245 NSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKE 304
L G+++H + G + + +L++MY + + + F ++ + +
Sbjct: 325 AVLSCGQQVHGGIVRRGFDKNVALINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMM 384
Query: 305 DGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG-KQVHAYAIRCGY 363
G+ + Y A++LF EM+ + PD +L CS +++G K +
Sbjct: 385 IGYGAHGYGKEAVKLFDEMVQSGIQPDRIVFMGVLCGCSHAGLVDKGLKYFRSMLEDYNI 444
Query: 364 DSDVHIGTALVDMYAKCGSLKHA-RLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFR 422
+ D I +VD+ + G ++ A +L PD A+L A + G +
Sbjct: 445 NPDQEIYRCVVDLLGRAGRVEEAFQLVENMPFEPDESVWGALLGACKAYKLSNLGNLAAQ 504
Query: 423 RIL 425
R+L
Sbjct: 505 RVL 507
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 73/189 (38%), Gaps = 43/189 (22%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGS+ D+ K+F MP RD VSW +++
Sbjct: 355 MYAKCGSISDSHKLFCDMPGRDLVSWTTMMI----------------------------- 385
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLG-KEFHGY 119
G+ +GY +EA+ + M G++P+ VL C+ + G K F
Sbjct: 386 -------GYGAHGYGKEAVKLFDEMVQSGIQPDRIVFMGVLCGCSHAGLVDKGLKYFRSM 438
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCEN------ 173
+ + + +VD+ R G + A ++ + + S ++G C+
Sbjct: 439 LEDYNINPDQEIYRCVVDLLGRAGRVEEAFQLVENMPFEPDESVWGALLGACKAYKLSNL 498
Query: 174 GNVAEAREL 182
GN+A R L
Sbjct: 499 GNLAAQRVL 507
>gi|224112156|ref|XP_002316102.1| predicted protein [Populus trichocarpa]
gi|222865142|gb|EEF02273.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 324 bits (830), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 184/538 (34%), Positives = 290/538 (53%), Gaps = 44/538 (8%)
Query: 53 DNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSL 112
+N N+ SWS++I G+ QN ++ + + RM+ E +E N TL ++ AC +L L
Sbjct: 162 ENLDRNVFSWSSMIAGYVQNNLAQDGLVLFNRMREELIEANQITLGILVHACKKLGALHQ 221
Query: 113 GKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCE 172
GK HGY+ + G ++V L+D+Y +CG
Sbjct: 222 GKWLHGYLIKCGIELGSYLVTALLDLYAKCG----------------------------- 252
Query: 173 NGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIE--PT 230
V +AR +FD++ + I+SW +MI GY N +EA +F L ++ + P
Sbjct: 253 --VVRDARSVFDELHGID----IVSWTAMIVGYTQNGCPEEALKLF---LQKEQVAVLPN 303
Query: 231 SFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFD 290
T SV +C+ + +L G+ IH L+I LG D V +LV+ Y + Q A+ F+
Sbjct: 304 DVTIASVFSSCSQLLNLNLGRSIHGLSIKLG-SRDPIVTNSLVDFYAKCQMNRDARYVFE 362
Query: 291 EIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMER 350
I + + + F N + A++LF +M + PD T+ +LSAC+SL ++
Sbjct: 363 TISDRDVVAWNSIISAFSQNGSAYEALELFHQMRMGSVLPDAVTLVSVLSACASLNALQV 422
Query: 351 GKQVHAYAIRCGY-DSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYA 409
G HAYA++ G S+V++GTAL+ YAKCG + AR+ + + V+ +AM++ Y
Sbjct: 423 GSSFHAYAVKRGLLSSNVYVGTALLTFYAKCGDAESARVIFDGMDQKSTVTWSAMISGYG 482
Query: 410 MHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSL 468
+ G+G+ ++ F +L + +P+ F S LSAC H G I G F ++ Y++ PS
Sbjct: 483 IQGNGRGSLSIFGDMLKAELKPNEEIFTSILSACSHTGMIGEGWRLFTMICQDYNLVPST 542
Query: 469 KHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIE 528
KHYTCMVDLL+RAG L EA +FI+K+P+ PD ++GA L GC H + G++A R++E
Sbjct: 543 KHYTCMVDLLARAGRLKEALDFIQKMPVQPDVSLFGAFLHGCGLHSRFDLGELAIKRMLE 602
Query: 529 LEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRAS 586
L P + YV++ NL+A RWS + + R+ MK R + K+PGCS +E D H F S
Sbjct: 603 LHPGDACYYVLMCNLYASDARWSKVKQVRELMKQRGLMKTPGCSLME-MDVDHDFSFS 659
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 102/231 (44%), Gaps = 37/231 (16%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y KC DA+ VF+ + +RD V+WNS+++A + NG EALE
Sbjct: 348 YAKCQMNRDARYVFETISDRDVVAWNSIISAFSQNGSAYEALE----------------- 390
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
+ +M+ + P+A TL SVL ACA L L +G FH Y
Sbjct: 391 -------------------LFHQMRMGSVLPDAVTLVSVLSACASLNALQVGSSFHAYAV 431
Query: 122 RNGFM-SNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G + SN +V L+ Y +CGD SA IF K+ V+ + +I GY GN +
Sbjct: 432 KRGLLSSNVYVGTALLTFYAKCGDAESARVIFDGMDQKSTVTWSAMISGYGIQGNGRGSL 491
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTS 231
+F M ++ + S++S + E + +F + + P++
Sbjct: 492 SIFGDMLKAELKPNEEIFTSILSACSHTGMIGEGWRLFTMICQDYNLVPST 542
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 122/274 (44%), Gaps = 5/274 (1%)
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C ++N+L E+HA + GL D LV +Y + L A++ FD I + + L
Sbjct: 15 CDNINTL---MEMHAYLVVQGLTRDLSCSTKLVSLYGSFGRLDLARLVFDTIPHPDFLSW 71
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
K+ + N + + ++ M D +L ACS + G++VH ++
Sbjct: 72 KVIIRWYFLNSEFRDIVGFYNRMRVCLKECDNVVFSHVLKACSESRNFDEGRKVHCQIVK 131
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
G + D + T LVDMYAKCG ++ +R + ++ S ++M+ Y + ++G+
Sbjct: 132 FG-NPDSFVFTGLVDMYAKCGEIECSRSVFDENLDRNVFSWSSMIAGYVQNNLAQDGLVL 190
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSR 480
F R+ + I+ + AC G++ G + ++ T ++DL ++
Sbjct: 191 FNRMREELIEANQITLGILVHACKKLGALHQGKWLHGYLIKCGIELGSYLVTALLDLYAK 250
Query: 481 AGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
G + +A ++ D V W A++ G +G
Sbjct: 251 CGVVRDARSVFDELH-GIDIVSWTAMIVGYTQNG 283
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 85/189 (44%), Gaps = 5/189 (2%)
Query: 340 SACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLV 399
S C ++ T+ ++HAY + G D+ T LV +Y G L ARL + I PD +
Sbjct: 13 SLCDNINTL---MEMHAYLVVQGLTRDLSCSTKLVSLYGSFGRLDLARLVFDTIPHPDFL 69
Query: 400 SQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM 459
S ++ Y ++ ++ + + R+ D++ F L AC + + G + +
Sbjct: 70 SWKVIIRWYFLNSEFRDIVGFYNRMRVCLKECDNVVFSHVLKACSESRNFDEGRKVHCQI 129
Query: 460 AYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFG 519
+ P +T +VD+ ++ GE+ E + + + W +++ G V + + G
Sbjct: 130 VKFG-NPDSFVFTGLVDMYAKCGEI-ECSRSVFDENLDRNVFSWSSMIAGYVQNNLAQDG 187
Query: 520 QIAADRLIE 528
+ +R+ E
Sbjct: 188 LVLFNRMRE 196
>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
Length = 2598
Score = 324 bits (830), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 177/553 (32%), Positives = 296/553 (53%), Gaps = 44/553 (7%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
N+ SW++VI + G EA+ ++ GL P + + +C+ L L G+ H
Sbjct: 1979 NVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSH 2038
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
GF ++ FV + L+D+Y +CG +
Sbjct: 2039 QQAFVFGFETDLFVSSALIDMYSKCGQL-------------------------------K 2067
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLL-----MRDG--IEPT 230
+AR LFD++ R ++SW SMI+GYV N D A +F+D L + DG +
Sbjct: 2068 DARALFDEIP----LRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLD 2123
Query: 231 SFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFD 290
S SVL AC+ ++ + +H + G VG L++ Y + + ++ FD
Sbjct: 2124 SVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFD 2183
Query: 291 EIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLS-LDLTPDIYTVGIILSACSSLATME 349
+E +++ + + + A+++F M+ + + + T+ +L AC+ +
Sbjct: 2184 WMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALR 2243
Query: 350 RGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYA 409
GK +H I+ + +V +GT+++DMY KCG ++ A+ + R+ ++ S AM+ Y
Sbjct: 2244 AGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYG 2303
Query: 410 MHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSL 468
MHG KE + F +++ +G +P++I+F+S L+AC HAG ++ G +F+ M + YD++P +
Sbjct: 2304 MHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGI 2363
Query: 469 KHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIE 528
+HY CMVDL RAG L EAY IK++ M PD V+WG+LLG C H N++ G+IAA +L E
Sbjct: 2364 EHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFE 2423
Query: 529 LEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDR 588
L+P+N G YV+L+NL+A AGRW+D+ R R MK+R++ K PG S +E + +H F D+
Sbjct: 2424 LDPDNCGYYVLLSNLYADAGRWADVERMRMLMKNRQLVKPPGFSLVELKGRVHVFLVGDK 2483
Query: 589 SHDRSEEIYTIID 601
H E IY ++
Sbjct: 2484 EHPHHEMIYKYLE 2496
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 104/357 (29%), Positives = 180/357 (50%), Gaps = 37/357 (10%)
Query: 170 YCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEP 229
Y +G +A A LF Q+++ +WN +I N L ++A ++++++ + GI
Sbjct: 69 YSTHGRIAYAILLFYQIQNPCT----FTWNLIIRANTINGLSEQALMLYKNMVCQ-GIAA 123
Query: 230 TSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMY--CRYQ------- 280
FTF V+ AC + S+ GK +H I G D FV L++ Y C +
Sbjct: 124 DKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVF 183
Query: 281 ----------------------DLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQ 318
DL A+ FDEI + + +G+ N A++
Sbjct: 184 EKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALE 243
Query: 319 LFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYA 378
LF M + ++ P+ YT+ ++ AC+ + + G+ +H YAI+ + V++GTAL+DMY+
Sbjct: 244 LFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYS 303
Query: 379 KCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLS 438
KCGS+K A ++ + L + N+M+T+ +HG G+E + F + +PD I+F+
Sbjct: 304 KCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIG 363
Query: 439 ALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKI 494
L ACVH ++K G +F M +Y + P +HY CM +L +R+ L EA++ K++
Sbjct: 364 VLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEAFKSTKEV 420
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 171/349 (48%), Gaps = 44/349 (12%)
Query: 55 ETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGK 114
+ P +W+ +I T NG E+A+ + M +G+ + T V+ AC + LGK
Sbjct: 86 QNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGK 145
Query: 115 EFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
HG + + GF + FV N L+D Y +CG ALK+F K ++N VS T+I G G
Sbjct: 146 VVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCG 205
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTF 234
++ EAR +FD++ + ++SW +MI+GY+ N +EA +F+ + + I P +T
Sbjct: 206 DLQEARRIFDEIP----SKNVVSWTAMINGYIRNQQPEEALELFKR-MQAENIFPNEYTM 260
Query: 235 GSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIEN 294
S++ AC +M L G+ IH AI ++ ++G AL++MY + + D IE
Sbjct: 261 VSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIK------DAIEV 314
Query: 295 IENLLGKMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILS 340
E + K ++ TWN+M LFSEM +++ PD T +L
Sbjct: 315 FETMPRK--------SLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLC 366
Query: 341 ACSSLATMERGKQVHAYAIRCGYDSDV--HIGTALVDMYAKCGSLKHAR 387
AC + ++ G C Y + + H G A + + +C + +AR
Sbjct: 367 ACVHIKNVKEG---------CAYFTRMTQHYGIAPIPEHYECMTELYAR 406
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 114/441 (25%), Positives = 188/441 (42%), Gaps = 121/441 (27%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG L DA+ +F +P R N+V
Sbjct: 2059 MYSKCGQLKDARALFDEIPLR------------------------------------NVV 2082
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFR--MQAE-------GLEPNARTLSSVLPACARLQKLS 111
SW+++I G+ QN + A+ +LF+ ++ E + ++ + SVL AC+R+
Sbjct: 2083 SWTSMITGYVQNEQADNAL-LLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKG 2141
Query: 112 LGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYC 171
+ + HG++ + GF + V N L+D Y +CG L + K+F K+++S N++I Y
Sbjct: 2142 ITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYA 2201
Query: 172 ENGNVAEARELFDQM-EHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPT 230
++G EA E+F M H+GV+ +
Sbjct: 2202 QSGLSGEALEVFHGMVRHVGVRYNAV---------------------------------- 2227
Query: 231 SFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFD 290
T +VL+ACA +LR GK IH I + L+ + VG ++++MYC+ + A+ FD
Sbjct: 2228 --TLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFD 2285
Query: 291 EIENIENLLGKMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVG 336
++ E NV +W AM +F +M+ + P+ T
Sbjct: 2286 RMK--------------EKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFV 2331
Query: 337 IILSACSSLATMERG-----KQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYK 391
+L+ACS +E G H Y I G + H G +VD++ + G L A K
Sbjct: 2332 SVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIE---HYG-CMVDLFGRAGCLNEAYNLIK 2387
Query: 392 RIS-TPDLVSQNAMLTAYAMH 411
R+ PD V ++L A +H
Sbjct: 2388 RMKMKPDFVVWGSLLGACRIH 2408
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 131/261 (50%), Gaps = 9/261 (3%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
Y KCG A KVF+ M R+ VSW +V++ + G + EA + + S N+V
Sbjct: 169 FYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPS-----KNVV 223
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A+I G+ +N EEA+ + RMQAE + PN T+ S++ AC + L+LG+ H Y
Sbjct: 224 SWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYA 283
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+N ++ L+D+Y +CG + A+++F K+ + N++I +G EA
Sbjct: 284 IKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEAL 343
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LF +ME + V+ I++ ++ V E + F + GI P + +
Sbjct: 344 NLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTEL 403
Query: 241 CADMNSL----RKGKEIHALA 257
A N+L + KE+ +LA
Sbjct: 404 YARSNNLDEAFKSTKEVGSLA 424
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 128/270 (47%), Gaps = 15/270 (5%)
Query: 27 NSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRM- 85
N+++ A A G L + + + M D+ +SW+++I + Q+G EA+ + M
Sbjct: 2163 NTLMDAYAKCGQPLVSKKVFDWMEEKDD-----ISWNSMIAVYAQSGLSGEALEVFHGMV 2217
Query: 86 QAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDM 145
+ G+ NA TLS+VL ACA L GK H + + N V ++D+Y +CG +
Sbjct: 2218 RHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRV 2277
Query: 146 LSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGY 205
A K F + KN S ++ GY +G EA ++F +M GV+ I++ S+++
Sbjct: 2278 EMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAAC 2337
Query: 206 VDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSD 265
L +E + F + + IEP +G ++ L E + L + ++ D
Sbjct: 2338 SHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCL---NEAYNLIKRMKMKPD 2394
Query: 266 TFVGGALVEMYCRYQ---DL--VAAQMAFD 290
V G+L+ CR DL +AAQ F+
Sbjct: 2395 FVVWGSLLGA-CRIHKNVDLGEIAAQKLFE 2423
>gi|297835482|ref|XP_002885623.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331463|gb|EFH61882.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 324 bits (830), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 175/502 (34%), Positives = 269/502 (53%), Gaps = 36/502 (7%)
Query: 95 RTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSK 154
R +++L C + L+ G+ HG++ ++ F + + N L+++Y +CG +
Sbjct: 52 RFYNTLLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGSL--------- 102
Query: 155 FSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEA 214
EAR++FD+M +R ++W ++ISGY + +A
Sbjct: 103 ----------------------EEARKVFDKMP----ERDFVTWTTLISGYSQHDRPFDA 136
Query: 215 FSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVE 274
+F +L R G P FT SV+ A A G ++H + G S+ VG AL++
Sbjct: 137 LVLFNQML-RFGFSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLD 195
Query: 275 MYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYT 334
+Y RY + AQ+ FD +E+ ++ G T A++LF ML P ++
Sbjct: 196 LYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRCGTEKALELFQGMLREGFRPSHFS 255
Query: 335 VGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS 394
+ ACSS +E+GK VHAY I+ G G L+DMYAK GS+ AR + R++
Sbjct: 256 YASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLA 315
Query: 395 TPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSE 454
D+VS N++LTAYA HG G E + F + G RP+ ISFLS L+AC H+G + G
Sbjct: 316 KRDVVSWNSLLTAYAQHGFGNEAVCWFEEMRRGGIRPNEISFLSVLTACSHSGLLDEGWH 375
Query: 455 FFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
+++LM + HY +VDLL RAG+L A FI+++P+ P + +W ALL C H
Sbjct: 376 YYELMKKDGIVLEAWHYVTIVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHK 435
Query: 515 NLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWI 574
N E G AA+ + EL+P++ G +V+L N++A GRW+D AR R+KMK+ + K P CSW+
Sbjct: 436 NTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWV 495
Query: 575 EDRDEIHKFRASDRSHDRSEEI 596
E + IH F A+D H + EEI
Sbjct: 496 EIENAIHMFVANDERHPQREEI 517
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 110/423 (26%), Positives = 175/423 (41%), Gaps = 83/423 (19%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGSL++A+KVF MPERD V
Sbjct: 95 MYAKCGSLEEARKVFDKMPERD------------------------------------FV 118
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+ +I G++Q+ +A+ + +M G PN TLSSV+ A A ++ G + HG+
Sbjct: 119 TWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAERRGCCGHQLHGFC 178
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ GF SN V + L+D+Y R G M A +F +N+VS N +I G+ +A
Sbjct: 179 VKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRCGTEKAL 238
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
ELF M +R+G P+ F++ S+ A
Sbjct: 239 ELFQGM------------------------------------LREGFRPSHFSYASLFGA 262
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFD-----EIENI 295
C+ L +GK +HA I G + F G L++MY + + A+ FD ++ +
Sbjct: 263 CSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSW 322
Query: 296 ENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVH 355
+LL + GF W F EM + P+ + +L+ACS ++ G +
Sbjct: 323 NSLLTAYAQHGFGNEAVCW-----FEEMRRGGIRPNEISFLSVLTACSHSGLLDEGWHYY 377
Query: 356 AYAIRCGYDSDVHIGTALVDMYAKCGSLKHA-RLAYKRISTPDLVSQNAMLTAYAMHGHG 414
+ G + +VD+ + G L A R + P A+L A MH +
Sbjct: 378 ELMKKDGIVLEAWHYVTIVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNT 437
Query: 415 KEG 417
+ G
Sbjct: 438 ELG 440
>gi|297847764|ref|XP_002891763.1| hypothetical protein ARALYDRAFT_314676 [Arabidopsis lyrata subsp.
lyrata]
gi|297337605|gb|EFH68022.1| hypothetical protein ARALYDRAFT_314676 [Arabidopsis lyrata subsp.
lyrata]
Length = 828
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 192/659 (29%), Positives = 318/659 (48%), Gaps = 77/659 (11%)
Query: 6 GSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAV 65
G+L +A+ +F+ M R VSWN++++A A NG + +A + + M S++A+
Sbjct: 64 GNLQEAEAIFRQMSHRSIVSWNAMISAYAENGKMSKAWQVFDEMP-----VRATTSYNAM 118
Query: 66 IGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGF 125
I +N D +G + + + E NA + ++++ R + + +
Sbjct: 119 ITAMIKNKCD---LGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAECLYAETPVK-- 173
Query: 126 MSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQ 185
+P N L+ Y R G A+++F ++K VS ++++ GYC+ G + +AR LFD+
Sbjct: 174 FRDPVASNVLLSGYLRVGKWNEAVRVFEGMAVKEVVSYSSMVDGYCKMGRILDARSLFDR 233
Query: 186 MEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMN 245
M +R +I+W +MI GY +++ F +F + + S T + AC D
Sbjct: 234 MP----ERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVRVNSNTLAVMFRACRDFF 289
Query: 246 SLRKGKEIHALAIALGLQSDTFVGGALVEMYCR--------------------------- 278
R+G +IH L + L+ D F+G +L+ MY +
Sbjct: 290 RYREGSQIHGLLSRMPLEFDLFLGNSLISMYSKLGYMGEAKAVFGVMKYKDSVSWNSLIT 349
Query: 279 -------------------------YQDLVAAQMAFDEIENIENLLGKMKE--------- 304
+ D++ EI L G M E
Sbjct: 350 GLVQREQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDDITWTAM 409
Query: 305 -DGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGY 363
F N Y A+ F +ML + P+ YT +LSA +SLA + G Q+H ++
Sbjct: 410 ISAFVSNGYYEEALCWFHKMLRKQVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNM 469
Query: 364 DSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRR 423
+D+ + +LV MY KCG+ A + IS P++VS N M++ ++ +G GKE + F
Sbjct: 470 ANDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGFSYNGFGKEAVKLFSM 529
Query: 424 ILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAG 482
+ ++G P+ ++FL+ LSACVH G + G ++F M + Y ++P HY CMVDL R+G
Sbjct: 530 LESTGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKFSYGIEPGPDHYACMVDLFGRSG 589
Query: 483 ELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLAN 542
L EAY I +P P S +WG+LL +H ++ ++AA +LIELEP++ YV+L+
Sbjct: 590 LLDEAYNLISTMPCEPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYVVLSQ 649
Query: 543 LFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
L++ G+ SD R K +R+ K PG SWI + ++H F A D SH EEI +D
Sbjct: 650 LYSMVGKNSDCDRIMNIKKSKRIKKDPGSSWIILKGQVHNFLAGDESHLNLEEIAFTLD 708
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 83/255 (32%), Positives = 124/255 (48%), Gaps = 26/255 (10%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNET---- 56
MY K G + +AK VF +M +D VSWNS++T + EA E E+M D +
Sbjct: 319 MYSKLGYMGEAKAVFGVMKYKDSVSWNSLITGLVQREQISEAYELFEKMPGKDMVSWTDM 378
Query: 57 ----------------------PNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNA 94
+ ++W+A+I F NGY EEA+ +M + + PN+
Sbjct: 379 IKGFSGKGEISKCVELFGMMPEKDDITWTAMISAFVSNGYYEEALCWFHKMLRKQVCPNS 438
Query: 95 RTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSK 154
T SSVL A A L L G + HG + + ++ V N LV +Y +CG+ A KIFS
Sbjct: 439 YTFSSVLSATASLADLIEGLQIHGRVVKMNMANDLSVQNSLVSMYCKCGNTNDAYKIFSC 498
Query: 155 FSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEA 214
S N VS NT+I G+ NG EA +LF +E G + +++ +++S V D
Sbjct: 499 ISEPNIVSYNTMISGFSYNGFGKEAVKLFSMLESTGKEPNGVTFLALLSACVHVGYVDLG 558
Query: 215 FSMFRDLLMRDGIEP 229
+ F+ + GIEP
Sbjct: 559 WKYFKSMKFSYGIEP 573
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 95/433 (21%), Positives = 174/433 (40%), Gaps = 41/433 (9%)
Query: 130 FVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHL 189
F N + R G++ A IF + S ++ VS N +I Y ENG +++A ++FD+M
Sbjct: 51 FQCNSQISKLARNGNLQEAEAIFRQMSHRSIVSWNAMISAYAENGKMSKAWQVFDEMP-- 108
Query: 190 GVQRGIISWNSMISGYVDNSL-YDEAFSMFRDLLMRDGIEPTSFTFGSVLIACAD----- 243
R S+N+MI+ + N +A+ +F D+ ++ + + G V D
Sbjct: 109 --VRATTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAECL 166
Query: 244 ------------------MNSLRKGKEIHALAIALGLQSDTFVG-GALVEMYCRYQDLVA 284
LR GK A+ + G+ V ++V+ YC+ ++
Sbjct: 167 YAETPVKFRDPVASNVLLSGYLRVGKWNEAVRVFEGMAVKEVVSYSSMVDGYCKMGRILD 226
Query: 285 AQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSL-DLTPDIYTVGIILSACS 343
A+ FD + + DG+ + + LF M D+ + T+ ++ AC
Sbjct: 227 ARSLFDRMPERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVRVNSNTLAVMFRACR 286
Query: 344 SLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNA 403
G Q+H R + D+ +G +L+ MY+K G + A+ + + D VS N+
Sbjct: 287 DFFRYREGSQIHGLLSRMPLEFDLFLGNSLISMYSKLGYMGEAKAVFGVMKYKDSVSWNS 346
Query: 404 MLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYD 463
++T E F ++ D +S+ + G I E F +M D
Sbjct: 347 LITGLVQREQISEAYELFEKMPGK----DMVSWTDMIKGFSGKGEISKCVELFGMMPEKD 402
Query: 464 VKPSLKHYTCMVDLLSRAGELGEAYEFIKKI---PMAPDSVMWGALLGGCVSHGNLEFGQ 520
+T M+ G EA + K+ + P+S + ++L S +L G
Sbjct: 403 DIT----WTAMISAFVSNGYYEEALCWFHKMLRKQVCPNSYTFSSVLSATASLADLIEGL 458
Query: 521 IAADRLIELEPNN 533
R++++ N
Sbjct: 459 QIHGRVVKMNMAN 471
>gi|356540844|ref|XP_003538894.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 748
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 193/628 (30%), Positives = 319/628 (50%), Gaps = 81/628 (12%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y K G +DAKKVF+ MP +D VS+NS++ NG + AL+ E M+ N+VS
Sbjct: 152 YAKKGQFNDAKKVFEQMPAKDLVSYNSMLAGYTQNGKMHLALQFFESMTE-----RNVVS 206
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W+ ++ G+ ++G D + LF + PNA + ++L A+ K++ +E +
Sbjct: 207 WNLMVAGYVKSG-DLSSAWQLFE---KIPNPNAVSWVTMLCGLAKYGKMAEARELFDRMP 262
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
+S N ++ Y + + A+K+F K K+ VS TII GY G + EAR+
Sbjct: 263 SKNVVS----WNAMIATYVQDLQVDEAVKLFKKMPHKDSVSWTTIINGYIRVGKLDEARQ 318
Query: 182 LFDQM--EHLGVQRGIIS-------------------------WNSMISGYVDNSLYDEA 214
+++QM + + Q ++S WNSMI+GY + DEA
Sbjct: 319 VYNQMPCKDITAQTALMSGLIQNGRIDEADQMFSRIGAHDVVCWNSMIAGYSRSGRMDEA 378
Query: 215 FSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVE 274
++FR + +++ + + G + G+ A I ++ V
Sbjct: 379 LNLFRQMPIKNSVSWNTMISGYA----------QAGQMDRATEIFQAMREKNIVS----- 423
Query: 275 MYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYT 334
+ L+A GF N +A++ M PD T
Sbjct: 424 ----WNSLIA---------------------GFLQNNLYLDALKSLVMMGKEGKKPDQST 458
Query: 335 VGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS 394
LSAC++LA ++ G Q+H Y ++ GY +D+ +G AL+ MYAKCG ++ A ++ I
Sbjct: 459 FACTLSACANLAALQVGNQLHEYILKSGYMNDLFVGNALIAMYAKCGRVQSAEQVFRDIE 518
Query: 395 TPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSE 454
DL+S N++++ YA++G+ + F ++ + PD ++F+ LSAC HAG G +
Sbjct: 519 CVDLISWNSLISGYALNGYANKAFKAFEQMSSERVVPDEVTFIGMLSACSHAGLANQGLD 578
Query: 455 FFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSH 513
F M + ++P +HY+C+VDLL R G L EA+ ++ + + ++ +WG+LLG C H
Sbjct: 579 IFKCMIEDFAIEPLAEHYSCLVDLLGRVGRLEEAFNTVRGMKVKANAGLWGSLLGACRVH 638
Query: 514 GNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSW 573
NLE G+ AA+RL ELEP+N NY+ L+N+ A AGRW ++ R R M+ +R K PGCSW
Sbjct: 639 KNLELGRFAAERLFELEPHNASNYITLSNMHAEAGRWEEVERVRMLMRGKRAGKQPGCSW 698
Query: 574 IEDRDEIHKFRASDRSHDRSEEIYTIID 601
IE +++I F + D + R + I I++
Sbjct: 699 IEVQNQIQHFLSHDPAKLRPKNIQIILN 726
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 102/463 (22%), Positives = 200/463 (43%), Gaps = 49/463 (10%)
Query: 109 KLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIV 168
KL LG G ++ F N ++ + G + A++IF + KN V+ N++I
Sbjct: 2 KLKLGIRSIGEAGKHAFNHNRQIIQ-----LGKLGKVEEAIRIFFNMTHKNLVTYNSMIS 56
Query: 169 GYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIE 228
+N + +AR+LFDQM R ++SWN+MI+GY+ N++ +EA +F + RD
Sbjct: 57 VLAKNARIRDARQLFDQMS----LRNLVSWNTMIAGYLHNNMVEEASELFDVMPERD--- 109
Query: 229 PTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMA 288
+F++ ++ L K +E+ L + + DT A++ Y + A+
Sbjct: 110 --NFSWALMITCYTRKGKLEKARELLEL---VPDKLDTACWNAMIAGYAKKGQFNDAKKV 164
Query: 289 FDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEM-----LSLDLTPDIYT-VGIILSAC 342
F+++ + + G+ N A+Q F M +S +L Y G + SA
Sbjct: 165 FEQMPAKDLVSYNSMLAGYTQNGKMHLALQFFESMTERNVVSWNLMVAGYVKSGDLSSAW 224
Query: 343 SSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQN 402
+ V + CG AK G + AR + R+ + ++VS N
Sbjct: 225 QLFEKIPNPNAVSWVTMLCG--------------LAKYGKMAEARELFDRMPSKNVVSWN 270
Query: 403 AMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYY 462
AM+ Y E + F+++ D +S+ + ++ + G + + ++ M
Sbjct: 271 AMIATYVQDLQVDEAVKLFKKMP----HKDSVSWTTIINGYIRVGKLDEARQVYNQMPCK 326
Query: 463 DVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIA 522
D+ T ++ L + G + EA + +I A D V W +++ G G ++ A
Sbjct: 327 DITAQ----TALMSGLIQNGRIDEADQMFSRIG-AHDVVCWNSMIAGYSRSGRMDE---A 378
Query: 523 ADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRM 565
+ ++ N+ ++ + + +A AG+ Q M+++ +
Sbjct: 379 LNLFRQMPIKNSVSWNTMISGYAQAGQMDRATEIFQAMREKNI 421
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 60/112 (53%), Gaps = 4/112 (3%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG + A++VF+ + D +SWNS+++ A NG +A + E+MSS + P+ V
Sbjct: 500 MYAKCGRVQSAEQVFRDIECVDLISWNSLISGYALNGYANKAFKAFEQMSS-ERVVPDEV 558
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE--GLEPNARTLSSVLPACARLQKL 110
++ ++ + G + + +F+ E +EP A S ++ R+ +L
Sbjct: 559 TFIGMLSACSHAGLANQGLD-IFKCMIEDFAIEPLAEHYSCLVDLLGRVGRL 609
>gi|297736528|emb|CBI25399.3| unnamed protein product [Vitis vinifera]
Length = 846
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 191/603 (31%), Positives = 295/603 (48%), Gaps = 72/603 (11%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K GS++D+ VF MM E N V
Sbjct: 211 MYAKLGSIEDSYWVFNMMTEH------------------------------------NQV 234
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A+I G T NG EA + RM+ PN TL SV A +L +++GKE
Sbjct: 235 SWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCA 294
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G N V L+D+Y +CG + A +F N ++C
Sbjct: 295 SELGIEGNVLVGTALIDMYSKCGSLHDARSVFDT----NFINC----------------- 333
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
GV WN+MISGY + EA ++ + ++GI +T+ SV A
Sbjct: 334 ---------GVNT---PWNAMISGYSQSGCSQEALELYVQMC-QNGITSDLYTYCSVFNA 380
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTF-VGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
A SL+ G+ +H + + GL V A+ + Y + L + FD +E + +
Sbjct: 381 IAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDVRKVFDRMEERDIVS 440
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
+ + A+ F M P+ +T +L +C+SL +E G+QVH
Sbjct: 441 WTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGRQVHGLLC 500
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
+ G D++ I +AL+DMYAKCGS+ A + +IS PD+VS A+++ YA HG ++ +
Sbjct: 501 KAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPDIVSWTAIISGYAQHGLVEDALQ 560
Query: 420 HFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLL 478
FRR+ SG + + ++ L L AC H G ++ G +F M Y V P ++HY C++DLL
Sbjct: 561 LFRRMELSGIKANAVTLLCVLFACSHGGMVEEGLFYFQQMEDGYGVVPEMEHYACIIDLL 620
Query: 479 SRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYV 538
R G L +A EFI+K+PM P+ ++W LLGGC HGN+E G+IAA +++ + P + YV
Sbjct: 621 GRVGRLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGNVELGEIAARKILSIRPEYSATYV 680
Query: 539 MLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYT 598
+L+N + G + D R MKD+ + K PG SWI + +HKF + D+ H + +EIY
Sbjct: 681 LLSNTYIETGSYEDGLSLRNVMKDQGVKKEPGYSWISVKGRVHKFYSGDQQHPQKKEIYV 740
Query: 599 IID 601
++
Sbjct: 741 KLE 743
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 145/551 (26%), Positives = 249/551 (45%), Gaps = 65/551 (11%)
Query: 21 RDCVSWNSVVTACAANGLVLEA------------------LECLERMSS--LDNETP--N 58
RDC S+ A A +GLVL++ +C E ++ + +E P N
Sbjct: 72 RDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMPQRN 131
Query: 59 LVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHG 118
+ SW+ +I G T++G + M G+ P+ S+++ +C L L LGK H
Sbjct: 132 VFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKMVHA 191
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
I GF ++ FV L+++Y + G + + +F+ + N+VS N +I G NG
Sbjct: 192 QIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNG---- 247
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDG-IEPTSFTFGSV 237
L+ EAF +F + M++G P +T SV
Sbjct: 248 -------------------------------LHLEAFDLF--VRMKNGACTPNMYTLVSV 274
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDE--IENI 295
A + + GKE+ A LG++ + VG AL++MY + L A+ FD I
Sbjct: 275 SKAVGKLVDVNMGKEVQNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCG 334
Query: 296 ENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVH 355
N G+ + + A++L+ +M +T D+YT + +A ++ +++ G+ VH
Sbjct: 335 VNTPWNAMISGYSQSGCSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVH 394
Query: 356 AYAIRCGYD-SDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHG 414
++CG D V + A+ D Y+KCG L+ R + R+ D+VS ++TAY+ G
Sbjct: 395 GMVLKCGLDLMVVSVNNAIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLG 454
Query: 415 KEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCM 474
+E +A F + GF P+ +F S L +C ++ G + L+ + + +
Sbjct: 455 EEALATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESAL 514
Query: 475 VDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNT 534
+D+ ++ G + EA + KI PD V W A++ G HG +E + R +EL
Sbjct: 515 IDMYAKCGSITEAGKVFDKIS-NPDIVSWTAIISGYAQHGLVE-DALQLFRRMELSGIKA 572
Query: 535 GNYVMLANLFA 545
+L LFA
Sbjct: 573 NAVTLLCVLFA 583
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 160/370 (43%), Gaps = 48/370 (12%)
Query: 91 EPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVV--NGLVDVYRRCGDMLSA 148
+ + L VL CA + K HG + ++ F +V N VY +C + +A
Sbjct: 61 QTQVQDLIDVLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAA 120
Query: 149 LKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDN 208
+F D+M QR + SW MI G ++
Sbjct: 121 CGVF-------------------------------DEMP----QRNVFSWTVMIVGSTEH 145
Query: 209 SLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFV 268
L+ + F F ++L GI P F + +++ +C ++SL GK +HA + G + FV
Sbjct: 146 GLFFDGFKFFCEML-NSGILPDKFAYSAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFV 204
Query: 269 GGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDL 328
+L+ MY + + + F+ + + G N A LF M +
Sbjct: 205 STSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGAC 264
Query: 329 TPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARL 388
TP++YT+ + A L + GK+V A G + +V +GTAL+DMY+KCGSL AR
Sbjct: 265 TPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGTALIDMYSKCGSLHDARS 324
Query: 389 AYKR------ISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSA 442
+ ++TP NAM++ Y+ G +E + + ++ +G D ++ S +A
Sbjct: 325 VFDTNFINCGVNTP----WNAMISGYSQSGCSQEALELYVQMCQNGITSDLYTYCSVFNA 380
Query: 443 CVHAGSIKTG 452
+ S++ G
Sbjct: 381 IAASKSLQFG 390
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/347 (21%), Positives = 149/347 (42%), Gaps = 39/347 (11%)
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTF--VGGALVEMYCRYQDLVAAQMAFDEIEN 294
VL CA+ S+R+ K +H L + + + +Y + + AA FDE+
Sbjct: 70 VLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMP- 128
Query: 295 IENLLGKMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILS 340
+ NV++W M + F EML+ + PD + I+
Sbjct: 129 -------------QRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQ 175
Query: 341 ACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVS 400
+C L ++E GK VHA + G+ + + + T+L++MYAK GS++ + + ++ + VS
Sbjct: 176 SCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVS 235
Query: 401 QNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA 460
NAM++ +G E F R+ P+ + +S A + G E + +
Sbjct: 236 WNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCAS 295
Query: 461 YYDVKPSLKHYTCMVDLLSRAGELGEAYE-FIKKIPMAPDSVMWGALLGGCVSHGNLEFG 519
++ ++ T ++D+ S+ G L +A F + W A++ G G
Sbjct: 296 ELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSG---CS 352
Query: 520 QIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMH 566
Q A + +++ N + ++L+ Y ++ +A ++ R +H
Sbjct: 353 QEALELYVQMCQNG-----ITSDLYTYCSVFNAIAASKSLQFGRVVH 394
>gi|449435950|ref|XP_004135757.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570-like [Cucumis sativus]
Length = 606
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 191/600 (31%), Positives = 300/600 (50%), Gaps = 74/600 (12%)
Query: 19 PERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETP--NLVSWSAVIGGFTQNGYDE 76
PE V +++ + GL EA +L NE P ++V+W+A+I GFT +
Sbjct: 39 PEGPSVWATNLIKSYFDKGLTREA-------CNLFNEIPERDVVTWTAMIVGFTSCNHYH 91
Query: 77 EAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLV 136
+A M M ++PNA T+SSVL AC ++ LS G H T++G + +V N L+
Sbjct: 92 QAWTMFSEMLRSEVQPNAFTMSSVLKACKGMKALSCGALAHSLATKHGIDRSVYVQNALL 151
Query: 137 DVYR-RCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGI 195
D+Y C M AL +F+ +K VS
Sbjct: 152 DMYAASCATMDDALSVFNDIPLKTAVS--------------------------------- 178
Query: 196 ISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHA 255
W ++I+G+ FR +L+ D + P SF+F ACA ++S GK+IHA
Sbjct: 179 --WTTLIAGFTHRGDGYSGLLAFRQMLLED-VGPNSFSFSIAARACASISSYSCGKQIHA 235
Query: 256 LAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWN 315
GL D V ++++MYCR L A+ F E+ E N+ TWN
Sbjct: 236 AVTKYGLHCDAPVMNSILDMYCRCNYLCDAKRCFGELT--------------EKNLITWN 281
Query: 316 -------------AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCG 362
++ LF +M S P+ +T I +AC++LA + G+QVH +R G
Sbjct: 282 TLIAGYERSDSSESLSLFFQMGSEGYKPNCFTFTSITAACANLAVLSCGQQVHGGIVRRG 341
Query: 363 YDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFR 422
+D +V + +L+DMYAKCGS+ + + + DLVS M+ Y HG+GKE + F
Sbjct: 342 FDKNVALINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMIGYGAHGYGKEAVKLFD 401
Query: 423 RILASGFRPDHISFLSALSACVHAGSIKTGSEFF-DLMAYYDVKPSLKHYTCMVDLLSRA 481
++ SG +PD I F+ L C HAG + G ++F ++ Y++ P + Y C+VDLL RA
Sbjct: 402 EMVQSGIQPDRIVFMGVLCGCSHAGLVDKGLKYFRSMLEDYNINPDQEIYRCVVDLLGRA 461
Query: 482 GELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLA 541
G + EA++ ++ +P PD +WGALLG C ++ G +AA R+++ PN G Y++L+
Sbjct: 462 GRVEEAFQLVENMPFEPDESVWGALLGACKAYKLSNLGNLAAQRVLDRRPNMAGTYLLLS 521
Query: 542 NLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
++A G+W + A+ R+ MK K G SWIE R+E++ F + E ++ +ID
Sbjct: 522 KIYAAEGKWGEFAKMRKLMKGMNKKKEVGKSWIEIRNEVYSFVVGAKMGPHIEWVHKVID 581
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 96/423 (22%), Positives = 169/423 (39%), Gaps = 75/423 (17%)
Query: 5 CGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSA 64
C ++DDA VF +P + VSW +
Sbjct: 158 CATMDDALSVFNDIPLKTAVSWTT------------------------------------ 181
Query: 65 VIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNG 124
+I GFT G + +M E + PN+ + S ACA + S GK+ H +T+ G
Sbjct: 182 LIAGFTHRGDGYSGLLAFRQMLLEDVGPNSFSFSIAARACASISSYSCGKQIHAAVTKYG 241
Query: 125 FMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFD 184
+ V+N ++D+Y RC + A + F + + KN ++ NT+I GY E + +E+ LF
Sbjct: 242 LHCDAPVMNSILDMYCRCNYLCDAKRCFGELTEKNLITWNTLIAGY-ERSDSSESLSLFF 300
Query: 185 QMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADM 244
QM +G +P FTF S+ ACA++
Sbjct: 301 QMG------------------------------------SEGYKPNCFTFTSITAACANL 324
Query: 245 NSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKE 304
L G+++H + G + + +L++MY + + + F ++ + +
Sbjct: 325 AVLSCGQQVHGGIVRRGFDKNVALINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMM 384
Query: 305 DGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG-KQVHAYAIRCGY 363
G+ + Y A++LF EM+ + PD +L CS +++G K +
Sbjct: 385 IGYGAHGYGKEAVKLFDEMVQSGIQPDRIVFMGVLCGCSHAGLVDKGLKYFRSMLEDYNI 444
Query: 364 DSDVHIGTALVDMYAKCGSLKHA-RLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFR 422
+ D I +VD+ + G ++ A +L PD A+L A + G +
Sbjct: 445 NPDQEIYRCVVDLLGRAGRVEEAFQLVENMPFEPDESVWGALLGACKAYKLSNLGNLAAQ 504
Query: 423 RIL 425
R+L
Sbjct: 505 RVL 507
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 73/189 (38%), Gaps = 43/189 (22%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGS+ D+ K+F MP RD VSW +++
Sbjct: 355 MYAKCGSISDSHKLFCDMPGRDLVSWTTMMI----------------------------- 385
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLG-KEFHGY 119
G+ +GY +EA+ + M G++P+ VL C+ + G K F
Sbjct: 386 -------GYGAHGYGKEAVKLFDEMVQSGIQPDRIVFMGVLCGCSHAGLVDKGLKYFRSM 438
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCEN------ 173
+ + + +VD+ R G + A ++ + + S ++G C+
Sbjct: 439 LEDYNINPDQEIYRCVVDLLGRAGRVEEAFQLVENMPFEPDESVWGALLGACKAYKLSNL 498
Query: 174 GNVAEAREL 182
GN+A R L
Sbjct: 499 GNLAAQRVL 507
>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 867
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 176/575 (30%), Positives = 313/575 (54%), Gaps = 46/575 (8%)
Query: 26 WNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRM 85
+NS+++ + G++ +A + ++M E + V+W+++I G+ +NG D E + +M
Sbjct: 232 FNSLISLYSRLGMLRDARDVFDKM-----EIRDWVTWNSMIAGYVRNGQDLEVFEIFNKM 286
Query: 86 QAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDM 145
Q G++P T +SV+ +CA L++L+L K ++GF ++ V+ L+ +C +M
Sbjct: 287 QLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVALSKCKEM 346
Query: 146 LSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGY 205
AL +FS E G + ++SW +MISG
Sbjct: 347 DDALSLFS----------------LMEEG------------------KNVVSWTAMISGC 372
Query: 206 VDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSD 265
+ N D+A ++F + R+G++P FT+ ++L + E+HA I +
Sbjct: 373 LQNGGNDQAVNLFSQM-RREGVKPNHFTYSAILTVHYPVFV----SEMHAEVIKTNYERS 427
Query: 266 TFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLS 325
+ VG AL++ Y + + + A F+ IE + + G+ T A +LF +++
Sbjct: 428 SSVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQTGETEEAAKLFHQLIK 487
Query: 326 LDLTPDIYTVGIILSACSS-LATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLK 384
+ P+ +T +++AC+S A E+GKQ HAYAI+ ++ + + +ALV MYAK G++
Sbjct: 488 EGIKPNEFTFSSVINACASPTAAAEQGKQFHAYAIKMRLNNALCVSSALVTMYAKRGNID 547
Query: 385 HARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACV 444
A +KR DLVS N+M++ Y+ HG K+ + F + D ++F+ ++AC
Sbjct: 548 SAHEVFKRQKERDLVSWNSMISGYSQHGQAKKALEVFDEMQKRNMDVDAVTFIGVITACT 607
Query: 445 HAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMW 503
HAG ++ G ++F+ M + + P++KHY+CM+DL SRAG L +A I ++P P + +W
Sbjct: 608 HAGLVEKGQKYFNSMINDHHINPTMKHYSCMIDLYSRAGMLEKAMGIINEMPFPPGATVW 667
Query: 504 GALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDR 563
LLG H N+E G++AA++LI L+P ++ YV+L+N++A AG W + R+ M R
Sbjct: 668 RTLLGAARVHRNVELGELAAEKLISLQPEDSAAYVLLSNMYAAAGNWQERTNVRKLMDKR 727
Query: 564 RMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYT 598
++ K PG SWIE +++ + F A D +H S +IY+
Sbjct: 728 KVKKEPGYSWIEVKNKTYSFLAGDLTHPLSNQIYS 762
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 126/518 (24%), Positives = 219/518 (42%), Gaps = 82/518 (15%)
Query: 69 FTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSN 128
++++ +EA+ + + L+P+ TLS V CA LG++ H + G + +
Sbjct: 68 YSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNICAGSLDGKLGRQVHCQCVKFGLVDH 127
Query: 129 PFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEH 188
V LVD+Y + ++ ++F + +N VS +++ GY NG ELF QM++
Sbjct: 128 VSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWNGLYGYVWELFCQMQY 187
Query: 189 LGV-----------------------------------QRGIISWNSMIS---------- 203
GV + I +NS+IS
Sbjct: 188 EGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRD 247
Query: 204 ---------------------GYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACA 242
GYV N E F +F + + G++PT TF SV+ +CA
Sbjct: 248 ARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLA-GVKPTHMTFASVIKSCA 306
Query: 243 DMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG-K 301
+ L K + A+ G +D V AL+ + +++ A F +E +N++
Sbjct: 307 SLRELALVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSLFSLMEEGKNVVSWT 366
Query: 302 MKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRC 361
G N A+ LFS+M + P+ +T IL+ + E +HA I+
Sbjct: 367 AMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAILTVHYPVFVSE----MHAEVIKT 422
Query: 362 GYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHF 421
Y+ +GTAL+D Y K G+ A ++ I DL++ +AML YA G +E F
Sbjct: 423 NYERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQTGETEEAAKLF 482
Query: 422 RRILASGFRPDHISFLSALSACVH-AGSIKTGSEFFDLMAYYDVKPSLKHYTC----MVD 476
+++ G +P+ +F S ++AC + + G +F Y +K L + C +V
Sbjct: 483 HQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQFHA----YAIKMRLNNALCVSSALVT 538
Query: 477 LLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
+ ++ G + A+E K+ D V W +++ G HG
Sbjct: 539 MYAKRGNIDSAHEVFKR-QKERDLVSWNSMISGYSQHG 575
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 159/347 (45%), Gaps = 25/347 (7%)
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
A LFD++ H + N ++ Y + EA ++F LL ++P T V
Sbjct: 44 AHNLFDKIPHRPTT--LKEHNQLLFSYSRDKQTKEALNLFVSLL-HSSLQPDESTLSCVF 100
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI--ENIE 296
CA + G+++H + GL VG +LV+MY + +++ + FDE+ N+
Sbjct: 101 NICAGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVV 160
Query: 297 NLLGKMKEDGFEPNVYTWNAM-----QLFSEMLSLDLTPDIYTVGIILSACSSLATMERG 351
+ + Y+WN + +LF +M + P+ YTV +++A + + G
Sbjct: 161 SWTSLLAG-------YSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIG 213
Query: 352 KQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMH 411
QVHA ++ G++ + + +L+ +Y++ G L+ AR + ++ D V+ N+M+ Y +
Sbjct: 214 LQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRN 273
Query: 412 GHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKH- 470
G E F ++ +G +P H++F S + +C + LM +K
Sbjct: 274 GQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCASLRELA----LVKLMQCKALKSGFTTD 329
Query: 471 ---YTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
T ++ LS+ E+ +A + + V W A++ GC+ +G
Sbjct: 330 QIVITALMVALSKCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNG 376
>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial [Vitis vinifera]
Length = 623
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 183/513 (35%), Positives = 279/513 (54%), Gaps = 43/513 (8%)
Query: 85 MQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGD 144
M+ G+ +A T S ++ C+ + GK H +I G+ FVVN L+++Y
Sbjct: 46 MERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLLNMY----- 100
Query: 145 MLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISG 204
KF++ + EA +LFD+M +R ++SW +MIS
Sbjct: 101 --------VKFNL------------------LEEAEDLFDEMP----ERNVVSWTTMISA 130
Query: 205 YVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQS 264
Y N L D+A L+ R+G+ P FT+ SVL AC + +LR ++H I GL+S
Sbjct: 131 Y-SNKLNDKALKCL-ILMFREGVRPNMFTYSSVLRACDGLPNLR---QLHCGIIKTGLES 185
Query: 265 DTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEML 324
D FV AL+++Y ++ DL A FDE+ + ++ GF N A+ LF M
Sbjct: 186 DVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRMK 245
Query: 325 SLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLK 384
D T+ +L AC+ LA +E G+QVH + ++ +D D+ + AL+DMY KCGSL+
Sbjct: 246 RAGFLADQATLTSVLRACTGLALLELGRQVHVHVLK--FDQDLILNNALIDMYCKCGSLE 303
Query: 385 HARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACV 444
A A+ R+ D++S + M+ A +G+ ++ + F + SG RP++I+ L L AC
Sbjct: 304 DANSAFSRMVEKDVISWSTMVAGLAQNGYSRQALELFESMKESGSRPNYITVLGVLFACS 363
Query: 445 HAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMW 503
HAG ++ G +F M + V P +HY C++DLL RAG L EA + I ++ PDSV W
Sbjct: 364 HAGLVEKGWYYFRSMKKLFGVDPGREHYGCLIDLLGRAGRLDEAVKLIHEMECEPDSVTW 423
Query: 504 GALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDR 563
LLG C H N++ AA ++IELEP + G Y++L+N++A RW D+A R+ M +R
Sbjct: 424 RTLLGACRVHRNVDLAIYAAKKIIELEPEDAGTYILLSNIYANTQRWEDVAEVRKTMTNR 483
Query: 564 RMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEI 596
+ K+PGCSWIE +IH F D SH + EEI
Sbjct: 484 GIRKTPGCSWIEVDKQIHVFILGDTSHPKIEEI 516
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 139/295 (47%), Gaps = 7/295 (2%)
Query: 220 DLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRY 279
D + R G+ + T+ ++ C+ ++++GK +H G + FV L+ MY ++
Sbjct: 44 DAMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLLNMYVKF 103
Query: 280 QDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIIL 339
L A+ FDE+ N++ N A++ M + P+++T +L
Sbjct: 104 NLLEEAEDLFDEMPE-RNVVSWTTMISAYSNKLNDKALKCLILMFREGVRPNMFTYSSVL 162
Query: 340 SACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLV 399
AC L + +Q+H I+ G +SDV + +AL+D+Y+K L +A + + T DLV
Sbjct: 163 RACDGLPNL---RQLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLV 219
Query: 400 SQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM 459
N+++ +A + G E + F+R+ +GF D + S L AC ++ G + +
Sbjct: 220 VWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQVHVHV 279
Query: 460 AYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
+D L + ++D+ + G L +A ++ + D + W ++ G +G
Sbjct: 280 LKFDQDLILNN--ALIDMYCKCGSLEDANSAFSRM-VEKDVISWSTMVAGLAQNG 331
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 135/299 (45%), Gaps = 63/299 (21%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTA-----------C---------------- 33
MY K L++A+ +F MPER+ VSW ++++A C
Sbjct: 99 MYVKFNLLEEAEDLFDEMPERNVVSWTTMISAYSNKLNDKALKCLILMFREGVRPNMFTY 158
Query: 34 -----AANGLV-LEALEC--------------------LERMSSLDN--------ETPNL 59
A +GL L L C + S LDN T +L
Sbjct: 159 SSVLRACDGLPNLRQLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDL 218
Query: 60 VSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
V W+++IGGF QN EA+ + RM+ G + TL+SVL AC L L LG++ H +
Sbjct: 219 VVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQVHVH 278
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ + F + + N L+D+Y +CG + A FS+ K+ +S +T++ G +NG +A
Sbjct: 279 VLK--FDQDLILNNALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQNGYSRQA 336
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
ELF+ M+ G + I+ ++ L ++ + FR + G++P +G ++
Sbjct: 337 LELFESMKESGSRPNYITVLGVLFACSHAGLVEKGWYYFRSMKKLFGVDPGREHYGCLI 395
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 91/202 (45%), Gaps = 21/202 (10%)
Query: 316 AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVD 375
AM+ M + D T ++ CS+ ++ GK+VH + GY+ + + L++
Sbjct: 39 AMRAMDAMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLLN 98
Query: 376 MYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHIS 435
MY K L+ A + + ++VS M++AY+ + K + + G RP+ +
Sbjct: 99 MYVKFNLLEEAEDLFDEMPERNVVSWTTMISAYSNKLNDK-ALKCLILMFREGVRPNMFT 157
Query: 436 FLSALSAC--------VHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEA 487
+ S L AC +H G IKTG E + + ++D+ S+ +L A
Sbjct: 158 YSSVLRACDGLPNLRQLHCGIIKTGLE-----------SDVFVRSALIDVYSKWSDLDNA 206
Query: 488 YEFIKKIPMAPDSVMWGALLGG 509
++P D V+W +++GG
Sbjct: 207 LGVFDEMP-TRDLVVWNSIIGG 227
>gi|357507741|ref|XP_003624159.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87162577|gb|ABD28372.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499174|gb|AES80377.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 755
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 181/567 (31%), Positives = 299/567 (52%), Gaps = 33/567 (5%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFR-MQAEGLEPNARTLSSVLPACARLQKLSLGKEF 116
N +W+ +I GF + E + LFR MQA+G PN TLSSVL C+R + GK
Sbjct: 97 NTQTWTILISGFARAAGSSELVFSLFREMQADGACPNQYTLSSVLKCCSRENNIQFGKGI 156
Query: 117 HGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNV 176
H +I RNG + + N ++D+Y +C + A F K+ VS N +I Y G+V
Sbjct: 157 HAWILRNGVGGDVVLENSILDLYLKCKEFEYAESFFELMIEKDVVSWNIMIGAYLREGDV 216
Query: 177 AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGS 236
++ E+F + + ++SWN++I G + A ++ G E + TF
Sbjct: 217 EKSLEMFRNFPN----KDVVSWNTIIDGLIQCGYERLALEQLY-CMVAHGTEFSPVTFSI 271
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
LI + ++ + G+++H + GL SD ++ +LVEMY + + A ++
Sbjct: 272 ALILVSSLSLVEVGRQLHGRVLTFGLNSDGYIRSSLVEMYGKCGRMDKASTILKDVP--- 328
Query: 297 NLLGKMKEDGF-----EPNV-----------YTWNA-----MQLFSEMLSLDLTPDIYTV 335
L +++ F EP Y WN M+ F M+ + DI TV
Sbjct: 329 --LNFLRKGNFGVTCKEPKARMVSWSSMVSGYVWNGKYEDGMKTFRSMVCELIVVDIRTV 386
Query: 336 GIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST 395
I+SAC++ +E GKQ+HAY + G D ++G++L+DMY+K GSL A + +++I
Sbjct: 387 ATIISACANAGILEFGKQIHAYIQKIGLRIDAYVGSSLIDMYSKSGSLDDALMIFEQIKE 446
Query: 396 PDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEF 455
P++V +M++ A+HG GKE I+ F +L G P+ ++F+ L+AC H G I+ G +
Sbjct: 447 PNVVLWTSMISGCALHGQGKEAISLFEGMLNLGIIPNEVTFVGVLNACSHVGLIEEGCRY 506
Query: 456 FDLMA-YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
F +M Y + P ++HYT MV+L RAG L EA FI + ++ + +W + L C H
Sbjct: 507 FRMMKDTYHINPEVEHYTSMVNLYGRAGHLIEAKNFIFENSISHFTSVWRSFLSSCRLHK 566
Query: 515 NLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWI 574
N G+ ++ L++ P++ Y++L+N+ + +W + A R M R + K PG SW+
Sbjct: 567 NFNMGKSVSEMLLQSAPSDPDAYILLSNMCSSNHQWDEAAIVRSLMYQRGVKKQPGQSWV 626
Query: 575 EDRDEIHKFRASDRSHDRSEEIYTIID 601
+ +D+IH F DRSH + +EIY+ +D
Sbjct: 627 QLKDQIHSFTVGDRSHPQDKEIYSYLD 653
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 117/407 (28%), Positives = 193/407 (47%), Gaps = 64/407 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KC + A+ F++M E+D VSWN ++ A G V ++LE + D +V
Sbjct: 178 LYLKCKEFEYAESFFELMIEKDVVSWNIMIGAYLREGDVEKSLEMFRNFPNKD-----VV 232
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ +I G Q GY+ A+ L+ M A G E + T S L + L + +G++ HG +
Sbjct: 233 SWNTIIDGLIQCGYERLALEQLYCMVAHGTEFSPVTFSIALILVSSLSLVEVGRQLHGRV 292
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNV-AEA 179
G S+ ++ + LV++Y +CG M A I + + + GN
Sbjct: 293 LTFGLNSDGYIRSSLVEMYGKCGRMDKASTILKD-----------VPLNFLRKGNFGVTC 341
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
+E +M +SW+SM+SGYV N Y++ FR ++ + I T +++
Sbjct: 342 KEPKARM---------VSWSSMVSGYVWNGKYEDGMKTFRSMVC-ELIVVDIRTVATIIS 391
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
ACA+ L GK+IHA +GL+ D +VG +L++MY + L A M F++I+
Sbjct: 392 ACANAGILEFGKQIHAYIQKIGLRIDAYVGSSLIDMYSKSGSLDDALMIFEQIK------ 445
Query: 300 GKMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSSL 345
EPNV W +M LF ML+L + P+ T +L+ACS +
Sbjct: 446 --------EPNVVLWTSMISGCALHGQGKEAISLFEGMLNLGIIPNEVTFVGVLNACSHV 497
Query: 346 ATMERGKQVH-----AYAIRCGYDSDVHIGTALVDMYAKCGSLKHAR 387
+E G + Y I + +V T++V++Y + G L A+
Sbjct: 498 GLIEEGCRYFRMMKDTYHI----NPEVEHYTSMVNLYGRAGHLIEAK 540
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 116/470 (24%), Positives = 225/470 (47%), Gaps = 62/470 (13%)
Query: 152 FSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLY 211
F K S++ S N ++ Y ++ N+ A +LFD++ H Q +W +ISG+ +
Sbjct: 59 FKKGSLQILNSANYLLTLYVKSSNLDHAHKLFDEITHKNTQ----TWTILISGFARAAGS 114
Query: 212 DE-AFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGG 270
E FS+FR+ + DG P +T SVL C+ N+++ GK IHA + G+ D +
Sbjct: 115 SELVFSLFRE-MQADGACPNQYTLSSVLKCCSRENNIQFGKGIHAWILRNGVGGDVVLEN 173
Query: 271 ALVEMYCRYQDLVAAQMAFD-----EIENIENLLGK-MKEDGFE---------PN--VYT 313
+++++Y + ++ A+ F+ ++ + ++G ++E E PN V +
Sbjct: 174 SILDLYLKCKEFEYAESFFELMIEKDVVSWNIMIGAYLREGDVEKSLEMFRNFPNKDVVS 233
Query: 314 WNA-----MQLFSEMLSL-----------DLTPDIYTVGIILSACSSLATMERGKQVHAY 357
WN +Q E L+L + +P +++ +IL SSL+ +E G+Q+H
Sbjct: 234 WNTIIDGLIQCGYERLALEQLYCMVAHGTEFSPVTFSIALIL--VSSLSLVEVGRQLHGR 291
Query: 358 AIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRI----------------STPDLVSQ 401
+ G +SD +I ++LV+MY KCG + A K + +VS
Sbjct: 292 VLTFGLNSDGYIRSSLVEMYGKCGRMDKASTILKDVPLNFLRKGNFGVTCKEPKARMVSW 351
Query: 402 NAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY 461
++M++ Y +G ++G+ FR ++ D + + +SAC +AG ++ G + +
Sbjct: 352 SSMVSGYVWNGKYEDGMKTFRSMVCELIVVDIRTVATIISACANAGILEFGKQIHAYIQK 411
Query: 462 YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQI 521
++ + ++D+ S++G L +A ++I P+ V+W +++ GC HG +
Sbjct: 412 IGLRIDAYVGSSLIDMYSKSGSLDDALMIFEQIK-EPNVVLWTSMISGCALHGQGKEAIS 470
Query: 522 AADRLIELE--PNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSP 569
+ ++ L PN +V + N ++ G + R + MKD H +P
Sbjct: 471 LFEGMLNLGIIPNEV-TFVGVLNACSHVGLIEEGCRYFRMMKD-TYHINP 518
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 57/118 (48%), Gaps = 4/118 (3%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K GSLDDA +F+ + E + V W S+++ CA +G EA+ E M +L PN V
Sbjct: 427 MYSKSGSLDDALMIFEQIKEPNVVLWTSMISGCALHGQGKEAISLFEGMLNL-GIIPNEV 485
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEG--LEPNARTLSSVLPACARLQKLSLGKEF 116
++ V+ + G EE FRM + + P +S++ R L K F
Sbjct: 486 TFVGVLNACSHVGLIEEGC-RYFRMMKDTYHINPEVEHYTSMVNLYGRAGHLIEAKNF 542
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 35/180 (19%), Positives = 76/180 (42%), Gaps = 2/180 (1%)
Query: 339 LSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDL 398
L + +S+ + + +H + + G ++ L+ +Y K +L HA + I+ +
Sbjct: 39 LHSTTSIGSPPSLRALHGHYFKKGSLQILNSANYLLTLYVKSSNLDHAHKLFDEITHKNT 98
Query: 399 VSQNAMLTAYAMHGHGKEGI-AHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFD 457
+ +++ +A E + + FR + A G P+ + S L C +I+ G
Sbjct: 99 QTWTILISGFARAAGSSELVFSLFREMQADGACPNQYTLSSVLKCCSRENNIQFGKGIHA 158
Query: 458 LMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
+ V + ++DL + E A F ++ + D V W ++G + G++E
Sbjct: 159 WILRNGVGGDVVLENSILDLYLKCKEFEYAESFF-ELMIEKDVVSWNIMIGAYLREGDVE 217
>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1291
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 188/573 (32%), Positives = 312/573 (54%), Gaps = 47/573 (8%)
Query: 31 TACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRM-QAEG 89
+ C G L+ E +R P+ V W++++ G+ QN EEA+ + +M +
Sbjct: 150 SKCGQMGEALKVFEEFQR--------PDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDC 201
Query: 90 LEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSAL 149
+ + TL SV+ ACA+L + G HG + R F + +VN L+++Y + G
Sbjct: 202 VVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTG------ 255
Query: 150 KIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNS 209
C I A LF +M ++ +ISW++MI+ Y +N
Sbjct: 256 -------------CEKI------------AANLFSKMP----EKDVISWSTMIACYANNE 286
Query: 210 LYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVG 269
+EA ++F +++ + EP S T S L ACA +L +GK+IH +A+ G + D V
Sbjct: 287 AANEALNLFHEMIEKR-FEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVS 345
Query: 270 GALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLT 329
AL++MY + A F + + + G+ N + +M +F MLS +
Sbjct: 346 TALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQ 405
Query: 330 PDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLA 389
PD V IL+A S L ++ +H Y +R G++S+V +G +L+++Y+KCGSL A
Sbjct: 406 PDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKL 465
Query: 390 YKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILA-SGFRPDHISFLSALSACVHAGS 448
+K + D+V ++M+ AY +HG G E + F +++ S RP++++FLS LSAC HAG
Sbjct: 466 FKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRPNNVTFLSILSACSHAGL 525
Query: 449 IKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALL 507
++ G + FD M + Y ++P +H+ MVDLL R G+LG+A + I ++P+ +WGALL
Sbjct: 526 VEEGLKIFDRMVHDYQLRPDSEHFGIMVDLLGRIGQLGKAMDIINRMPIPAGPHVWGALL 585
Query: 508 GGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHK 567
G C H N+E G+ AA L L+P++ G Y++L+N++A G+W ++A R ++K+R + K
Sbjct: 586 GACRIHHNIEMGEAAAKNLFWLDPSHAGYYILLSNIYAVDGKWDNVAELRTRIKERGLKK 645
Query: 568 SPGCSWIEDRDEIHKFRASDRSHDRSEEIYTII 600
G S +E R +H F ASDR H S++IY ++
Sbjct: 646 MFGQSMVEVRGGVHSFLASDRFHPDSQKIYELL 678
Score = 298 bits (763), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 143/405 (35%), Positives = 241/405 (59%), Gaps = 2/405 (0%)
Query: 198 WNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALA 257
WN MI G+ + + + ++ + M G++P F F L +CA ++ L++GK IH
Sbjct: 786 WNVMIRGFATDGRFLSSLELYSKM-MEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHL 844
Query: 258 IALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAM 317
+ G +D FV ALV+MY + D+ AA++ FD++ + + G+ N Y +
Sbjct: 845 VCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETL 904
Query: 318 QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMY 377
F M S + P+ ++ +L AC +L + +G+ H+Y I+ G++ D+ + TA++DMY
Sbjct: 905 GFFDLMRSSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMY 964
Query: 378 AKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFL 437
+KCGSL AR + + DLV +AM+ +Y +HGHG++ I F +++ +G RP H++F
Sbjct: 965 SKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFT 1024
Query: 438 SALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPM 496
LSAC H+G ++ G +F LM + + L +Y CMVDLL RAG+L EA + I+ +P+
Sbjct: 1025 CVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPV 1084
Query: 497 APDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLART 556
PD+ +WG+LLG C H NL+ + AD L L+P + G +V+L+N++A RW+++ +
Sbjct: 1085 EPDASIWGSLLGACRIHNNLDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKV 1144
Query: 557 RQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
R+ M R +K G S +E +++HKF DRSH + E++Y ++
Sbjct: 1145 RKMMARRGANKIQGFSLVEYDNQVHKFGVGDRSHPQWEKLYAKLE 1189
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 150/587 (25%), Positives = 252/587 (42%), Gaps = 114/587 (19%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KC SL A+KVF P PN+
Sbjct: 45 LYAKCASLQAARKVFDETPH------------------------------------PNVH 68
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQ-AEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
W++ + + + EE + + M G P+ T+ L ACA L+ L LGK HG+
Sbjct: 69 LWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGF 128
Query: 120 ITRNGFM-SNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
+N + S+ FV + LV++Y +CG M ALK+F +F + V +++ GY +N + E
Sbjct: 129 AKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEE 188
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
A LF QM +M D + T SV+
Sbjct: 189 ALALFSQM-----------------------------------VMMDCVVLDPVTLVSVV 213
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
ACA + +++ G +H L I D + +L+ +Y A+ ++I NL
Sbjct: 214 SACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLY--------AKTGCEKIA--ANL 263
Query: 299 LGKMKEDGFEPNVYTWN--------------AMQLFSEMLSLDLTPDIYTVGIILSACSS 344
KM E +V +W+ A+ LF EM+ P+ TV L AC+
Sbjct: 264 FSKMPEK----DVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAV 319
Query: 345 LATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAM 404
+E GK++H A+ G++ D + TAL+DMY KC A ++R+ D+VS A+
Sbjct: 320 SRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVAL 379
Query: 405 LTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDV 464
L+ YA +G + + FR +L+ G +PD ++ + L+A G + +
Sbjct: 380 LSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGF 439
Query: 465 KPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN----LE-FG 519
++ +++L S+ G LG+A + K + + D V+W +++ HG LE F
Sbjct: 440 NSNVFVGASLIELYSKCGSLGDAVKLFKGM-IVRDVVIWSSMIAAYGIHGRGGEALEIFD 498
Query: 520 QIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMH 566
Q+ + + PNN ++ + + ++AG L K+ DR +H
Sbjct: 499 QMVKNSTV--RPNNV-TFLSILSACSHAG----LVEEGLKIFDRMVH 538
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 105/387 (27%), Positives = 188/387 (48%), Gaps = 13/387 (3%)
Query: 135 LVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVG-----YCENGNVAEARELFDQMEHL 189
LVD+++ C + S ++ S+ K + +T Y + ++ AR++FD+ H
Sbjct: 7 LVDLFQACNNGRSVSQLHSQV-FKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHP 65
Query: 190 GVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRK 249
V WNS + Y ++E +F ++ G P +FT L ACA + L
Sbjct: 66 NVHL----WNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLEL 121
Query: 250 GKEIHALAIALG-LQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFE 308
GK IH A + SD FVG ALVE+Y + + A F+E + + +L G++
Sbjct: 122 GKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQ 181
Query: 309 PNVYTWNAMQLFSEMLSLD-LTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDV 367
N A+ LFS+M+ +D + D T+ ++SAC+ L ++ G VH IR +D D+
Sbjct: 182 QNNDPEEALALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDL 241
Query: 368 HIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILAS 427
+ +L+++YAK G K A + ++ D++S + M+ YA + E + F ++
Sbjct: 242 PLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEK 301
Query: 428 GFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEA 487
F P+ ++ +SAL AC + +++ G + + + + T ++D+ + EA
Sbjct: 302 RFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEA 361
Query: 488 YEFIKKIPMAPDSVMWGALLGGCVSHG 514
+ +++P D V W ALL G +G
Sbjct: 362 VDLFQRLP-KKDVVSWVALLSGYAQNG 387
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 138/566 (24%), Positives = 253/566 (44%), Gaps = 68/566 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNS-------------------------------- 28
+Y KCGSL DA K+FK M RD V W+S
Sbjct: 452 LYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRPNNV 511
Query: 29 ----VVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFR 84
+++AC+ GLV E L+ +RM P+ + ++ + G +A+ ++ R
Sbjct: 512 TFLSILSACSHAGLVEEGLKIFDRMVHDYQLRPDSEHFGIMVDLLGRIGQLGKAMDIINR 571
Query: 85 MQAEGLEPNARTLSSVLPACARLQKLSLGKE-----FHGYITRNGF---MSNPFVVNGLV 136
M + ++L AC + +G+ F + G+ +SN + V+G
Sbjct: 572 MP---IPAGPHVWGALLGACRIHHNIEMGEAAAKNLFWLDPSHAGYYILLSNIYAVDGKW 628
Query: 137 DVYRRCGDMLSAL---KIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQR 193
D + K+F + ++ ++ + + +++++++ + L Q
Sbjct: 629 DNVAELRTRIKERGLKKMFGQSMVEVRGGVHSFLA---SDRFHPDSQKIYELLRKLEAQM 685
Query: 194 GIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV----LIACADMNSLRK 249
G + +D L+D ++ + E T GS I+C + L+K
Sbjct: 686 G----KEVYIPDLDFLLHDTG-AVLQFWQRIKATESKYKTIGSAPGTDTISC--FSCLKK 738
Query: 250 GKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEP 309
HA A GLQ D+ + MY + + AA + F++I N + L + GF
Sbjct: 739 ---THAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFAT 795
Query: 310 NVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHI 369
+ ++++L+S+M+ L PD + L +C+ L+ ++RGK +H + + CG +D+ +
Sbjct: 796 DGRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFV 855
Query: 370 GTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGF 429
ALVDMYAKCG ++ ARL + +++ DLVS +M++ YA +G+ E + F + +SG
Sbjct: 856 DAALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGV 915
Query: 430 RPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYE 489
P+ +S LS L AC + G+++ G F + + + T ++D+ S+ G L A
Sbjct: 916 IPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARC 975
Query: 490 FIKKIPMAPDSVMWGALLGGCVSHGN 515
+ D V W A++ HG+
Sbjct: 976 LFDETA-GKDLVCWSAMIASYGIHGH 1000
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 136/300 (45%), Gaps = 38/300 (12%)
Query: 55 ETPNLVS--WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSL 112
+ PN S W+ +I GF +G ++ + +M +GL+P+ L +CA L L
Sbjct: 777 DIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQR 836
Query: 113 GKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCE 172
GK H ++ G ++ FV LVD+Y +CGD
Sbjct: 837 GKVIHQHLVCCGCSNDLFVDAALVDMYAKCGD---------------------------- 868
Query: 173 NGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSF 232
+ AR +FD+M R ++SW SMISGY N E F DL+ G+ P
Sbjct: 869 ---IEAARLVFDKM----AVRDLVSWTSMISGYAHNGYNSETLGFF-DLMRSSGVIPNRV 920
Query: 233 TFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI 292
+ SVL+AC ++ +LRKG+ H+ I G + D V A+++MY + L A+ FDE
Sbjct: 921 SILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDET 980
Query: 293 ENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGK 352
+ + + + + A+ LF +M+ + P T +LSACS +E GK
Sbjct: 981 AGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGK 1040
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 111/468 (23%), Positives = 189/468 (40%), Gaps = 112/468 (23%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNS-------------------------------- 28
+Y KCG + +A KVF+ D V W S
Sbjct: 148 LYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCVVLDPV 207
Query: 29 ----VVTACA----------ANGLVLE------------------ALECLERMSSLDNET 56
VV+ACA +GLV+ C + ++L ++
Sbjct: 208 TLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAANLFSKM 267
Query: 57 P--NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGK 114
P +++SWS +I + N EA+ + M + EPN+ T+ S L ACA + L GK
Sbjct: 268 PEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGK 327
Query: 115 EFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
+ H GF + V L+D+Y +C A+ +F + K+ VS ++ GY +NG
Sbjct: 328 KIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVALLSGYAQNG 387
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTF 234
+++ SM +FR++L DGI+P +
Sbjct: 388 ---------------------MAYKSM--------------GVFRNML-SDGIQPDAVAV 411
Query: 235 GSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIEN 294
+L A +++ ++ +H + G S+ FVG +L+E+Y + L A F +
Sbjct: 412 VKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIV 471
Query: 295 IENLLGKMKEDGFEPNVYTWNAMQLFSEML-SLDLTPDIYTVGIILSACSSLATMERG-- 351
+ ++ + + A+++F +M+ + + P+ T ILSACS +E G
Sbjct: 472 RDVVIWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRPNNVTFLSILSACSHAGLVEEGLK 531
Query: 352 ---KQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTP 396
+ VH Y +R DS+ H G +VD+ + G L A R+ P
Sbjct: 532 IFDRMVHDYQLR--PDSE-HFGI-MVDLLGRIGQLGKAMDIINRMPIP 575
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 149/342 (43%), Gaps = 79/342 (23%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG ++ A+ VF M RD LV
Sbjct: 862 MYAKCGDIEAARLVFDKMAVRD------------------------------------LV 885
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+++I G+ NGY+ E +G M++ G+ PN ++ SVL AC L L G+ FH Y+
Sbjct: 886 SWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKGEWFHSYV 945
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ GF + V ++D+Y +CG + A +F + + K+ V + +I Y +G+ +A
Sbjct: 946 IQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAI 1005
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFR-------------------DL 221
+LFDQM GV+ +++ ++S + L +E F+ DL
Sbjct: 1006 DLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDL 1065
Query: 222 LMRDG-------------IEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFV 268
L R G +EP + +GS+L AC N+L ++I L D
Sbjct: 1066 LGRAGQLSEAVDLIENMPVEPDASIWGSLLGACRIHNNLDLAEKIADHLFHL----DPVH 1121
Query: 269 GGALVEMYCRYQDLVAAQMAFDEIENIENLL---GKMKEDGF 307
G V + ++ AA+ ++E+E + ++ G K GF
Sbjct: 1122 AGYHVLL----SNIYAAKSRWNEVEKVRKMMARRGANKIQGF 1159
>gi|147853412|emb|CAN82303.1| hypothetical protein VITISV_013933 [Vitis vinifera]
Length = 549
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 172/562 (30%), Positives = 287/562 (51%), Gaps = 74/562 (13%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
N+ +++A+I GF NG+ EE +M+ EG+ P+ T + AC + ++ K+ H
Sbjct: 23 NVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKFTFPCAIKACLDVLEI---KKIH 79
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
G + + G + F+ + LV+ Y + G M A F + I
Sbjct: 80 GLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPI-------------------- 119
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
R ++ WN+M++GY ++ FR + + + P+ FT +
Sbjct: 120 ---------------RDVVLWNAMVNGYAQIGQFEMVLETFRRM-NDESVVPSRFTVTGI 163
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
L A M L G+ IH A+ +G S V +L++MY + + + A F+ +
Sbjct: 164 LSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMR---- 219
Query: 298 LLGKMKEDGFEPNVYTWNA--------------MQLFSEMLSLDLTPDIYTVGIILSACS 343
E ++++WN+ ++L ML + PD+ TV +L ACS
Sbjct: 220 ----------EKDIFSWNSIXSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACS 269
Query: 344 SLATMERGKQVHAYAIRCGYDSD------VHIGTALVDMYAKCGSLKHARLAYKRISTPD 397
LA + G+++H Y I G D V + A++DMYAKCGS++ A L ++R+ D
Sbjct: 270 HLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMXNKD 329
Query: 398 LVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFD 457
+ S N M+ Y MHG+G E + F R+ +PD ++F+ LSAC HAG + G F
Sbjct: 330 VASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLA 389
Query: 458 LM-AYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNL 516
M + YDV P+++HYTC++D+L RAG+L EAYE +P+ + V+W ALL C H +
Sbjct: 390 QMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALLAACRLHKHA 449
Query: 517 EFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIED 576
++AA R+ ELEP + G+YV+++N++ GR+ ++ R M+ + + K+PGCSWIE
Sbjct: 450 VLAEVAAQRVFELEPEHCGSYVLMSNVYGAVGRYEEVLEVRHTMRQQNVRKTPGCSWIEL 509
Query: 577 RDEIHKFRASDRSHDRSEEIYT 598
++ +H F ++DR+H + IY
Sbjct: 510 KNGVHVFVSADRAHPEAYSIYA 531
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 113/442 (25%), Positives = 187/442 (42%), Gaps = 57/442 (12%)
Query: 5 CGSLDDAKKV----FKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
C + + KK+ FK E D +++V GL+ A E + D +V
Sbjct: 69 CLDVLEIKKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRD-----VV 123
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
W+A++ G+ Q G E + RM E + P+ T++ +L A + L+ G+ HG+
Sbjct: 124 LWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGILSVFAVMGDLNNGRIIHGFA 183
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G+ S V N L+D+Y +C + AL+IF K+ S N+I + + G+
Sbjct: 184 MKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIXSVHEQCGDHDGTL 243
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
L D+M LG GI+P T +VL A
Sbjct: 244 RLLDRM--LGA----------------------------------GIQPDLVTVTTVLPA 267
Query: 241 CADMNSLRKGKEIHALAIALGLQS------DTFVGGALVEMYCRYQDLVAAQMAFDEIEN 294
C+ + +L G+EIH I GL D + A+++MY + + A + F+ + N
Sbjct: 268 CSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMXN 327
Query: 295 IENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV 354
+ + G+ + Y A+++FS M + L PD T +LSACS + +G+
Sbjct: 328 KDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNF 387
Query: 355 HAYAIRCGYDSDVHIG--TALVDMYAKCGSLKHA-RLAYKRISTPDLVSQNAMLTAYAMH 411
A ++ YD I T ++DM + G L A LA + V A+L A +H
Sbjct: 388 LA-QMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALLAACRLH 446
Query: 412 GHGKEGIAHFRRILASGFRPDH 433
H +R+ P+H
Sbjct: 447 KHAVLAEVAAQRVFE--LEPEH 466
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 141/304 (46%), Gaps = 49/304 (16%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKC ++DA ++F+MM E+D +
Sbjct: 201 MYGKCKCIEDALEIFEMMREKD------------------------------------IF 224
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+++ Q G + + +L RM G++P+ T+++VLPAC+ L L G+E HGY+
Sbjct: 225 SWNSIXSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYM 284
Query: 121 TRNGF------MSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
+G + + + N ++D+Y +CG M A +F + K+ S N +I+GY +G
Sbjct: 285 IVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMXNKDVASWNIMIMGYGMHG 344
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTF 234
EA E+F +M + ++ +++ ++S + + + + + PT +
Sbjct: 345 YGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLAQMKSKYDVAPTIEHY 404
Query: 235 GSVLIACADMNSLRKGK--EIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI 292
V+ DM R G+ E + LA+ + ++++ V AL+ ++ V A++A +
Sbjct: 405 TCVI----DMLG-RAGQLDEAYELALTMPIEANPVVWRALLAACRLHKHAVLAEVAAQRV 459
Query: 293 ENIE 296
+E
Sbjct: 460 FELE 463
Score = 46.2 bits (108), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 69/146 (47%), Gaps = 11/146 (7%)
Query: 376 MYAKCGSLKHARLAYKRISTP----DLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRP 431
MY+KC + A S P ++ + NA+++ + +G +EG ++++ G P
Sbjct: 1 MYSKCNQMN---FALSIFSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVMP 57
Query: 432 DHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFI 491
D +F A+ AC+ IK + L+ + ++ + + +V+ + G + A
Sbjct: 58 DKFTFPCAIKACLDVLEIK---KIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAF 114
Query: 492 KKIPMAPDSVMWGALLGGCVSHGNLE 517
+++P+ D V+W A++ G G E
Sbjct: 115 EELPIR-DVVLWNAMVNGYAQIGQFE 139
>gi|115485519|ref|NP_001067903.1| Os11g0482400 [Oryza sativa Japonica Group]
gi|77550880|gb|ABA93677.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
gi|113645125|dbj|BAF28266.1| Os11g0482400 [Oryza sativa Japonica Group]
Length = 770
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 181/614 (29%), Positives = 307/614 (50%), Gaps = 87/614 (14%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y +C + DA+++F MPER N+V+
Sbjct: 123 YMRCSAARDARRLFDGMPER------------------------------------NVVT 146
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W+A++ G+T N + + M G P+ TL + L AC + LGK+ HGY
Sbjct: 147 WTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGKQVHGYAI 206
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
+ G S + N L +Y + G + SAL+ F + KN
Sbjct: 207 KYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKN---------------------- 244
Query: 182 LFDQMEHLGVQRGIISWNSMISGYV-DNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+I+W +MIS D + S+F D+LM DG+ P FT SV+
Sbjct: 245 -------------VITWTTMISACAEDEECVELGMSLFIDMLM-DGVMPNEFTLTSVMSL 290
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE---- 296
C L GK++ A + +G +++ V + + +Y R + A F+++E+
Sbjct: 291 CGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITW 350
Query: 297 --------NLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATM 348
++ K+D + + A+ +F ++ + PD++T ILS CS++ +
Sbjct: 351 NAMISGYAQIMDSAKDD-LQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMAL 409
Query: 349 ERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAY 408
E+G+Q+HA I+ G+ SDV + +ALV+MY KCG ++ A A+ + T V+ +M++ Y
Sbjct: 410 EQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGY 469
Query: 409 AMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPS 467
+ HG +E I F + +G RP+ I+F+S LSAC +AG ++ +FD+M Y ++P
Sbjct: 470 SQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPV 529
Query: 468 LKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLI 527
+ HY CM+D+ R G + +A+ FIK+ P+ +W +L+ GC SHGN+E AAD+L+
Sbjct: 530 VDHYGCMIDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLL 589
Query: 528 ELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASD 587
EL+P Y++L N++ RW D+AR R+ MK + SWI +D+++ FRA+D
Sbjct: 590 ELKPKGIETYILLLNMYISTERWQDVARVRKLMKQEDVGILRDRSWITIKDKVYFFRAND 649
Query: 588 RSHDRSEEIYTIID 601
R+H ++ E+Y +++
Sbjct: 650 RTHPQATELYQLLE 663
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 118/501 (23%), Positives = 214/501 (42%), Gaps = 84/501 (16%)
Query: 76 EEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGL 135
+EA+ ML EG + +L C L + HG++ + G ++ FV L
Sbjct: 64 QEAMTML----TEGKAVQSAMYVPLLHRCVETGSLGAARAVHGHMAKTGASADMFVATSL 119
Query: 136 VDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGI 195
V+ Y RC SA + +AR LFD M +R +
Sbjct: 120 VNAYMRC----SAAR---------------------------DARRLFDGMP----ERNV 144
Query: 196 ISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHA 255
++W ++++GY NS +F ++L G P+ +T G+ L AC + GK++H
Sbjct: 145 VTWTALVTGYTLNSQPALGLEVFVEML-EMGRYPSHYTLGATLNACLASCDVDLGKQVHG 203
Query: 256 LAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWN 315
AI G +S T +G +L +Y + L +A AF I E NV TW
Sbjct: 204 YAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIP--------------EKNVITWT 249
Query: 316 A---------------MQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
M LF +ML + P+ +T+ ++S C + + GKQV A++ +
Sbjct: 250 TMISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFK 309
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAM---------- 410
G ++++ + + + +Y + G A ++++ +++ NAM++ YA
Sbjct: 310 IGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQ 369
Query: 411 -HGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLK 469
G + + FR + S +PD +F S LS C +++ G + +
Sbjct: 370 ARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVV 429
Query: 470 HYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN-LEFGQIAAD-RLI 527
+ +V++ ++ G + +A + ++P V W +++ G HG E Q+ + RL
Sbjct: 430 VNSALVNMYNKCGCIQDANKAFLEMP-TRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLA 488
Query: 528 ELEPNNTGNYVMLANLFAYAG 548
+ PN +V L + +YAG
Sbjct: 489 GVRPNEI-TFVSLLSACSYAG 508
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 116/430 (26%), Positives = 186/430 (43%), Gaps = 92/430 (21%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y K GSLD A + F +PE++ ++W ++++ACA E EC+E
Sbjct: 223 LYAKLGSLDSALRAFWRIPEKNVITWTTMISACA------EDEECVEL------------ 264
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+ + M +G+ PN TL+SV+ C L+LGK+ +
Sbjct: 265 -----------------GMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFS 307
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G +N V N + +Y R G+ A+++F
Sbjct: 308 FKIGCETNLPVKNSTMYLYLRKGETDEAMRLF---------------------------- 339
Query: 181 ELFDQMEHLGVQRGIISWNSMISGY---VDNSLYD--------EAFSMFRDLLMRDGIEP 229
+QME II+WN+MISGY +D++ D +A ++FRD L R ++P
Sbjct: 340 ---EQME----DASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRD-LKRSVMKP 391
Query: 230 TSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAF 289
FTF S+L C+ M +L +G++IHA I G SD V ALV MY + + A AF
Sbjct: 392 DLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAF 451
Query: 290 DEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATME 349
E+ + G+ + A+QLF EM + P+ T +LSACS +E
Sbjct: 452 LEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVE 511
Query: 350 RGKQV-----HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNA 403
+ Y I D H G ++DM+ + G ++ A KR P+ ++
Sbjct: 512 EAEHYFDMMKKEYCIEPVVD---HYG-CMIDMFVRLGRVEDAFSFIKRTGFEPNEAIWSS 567
Query: 404 MLTAYAMHGH 413
++ HG+
Sbjct: 568 LVAGCRSHGN 577
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 90/200 (45%), Gaps = 12/200 (6%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG + DA K F MP R V+W S+++ + +G EA++ E M L PN +
Sbjct: 437 MYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEM-RLAGVRPNEI 495
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
++ +++ + G EEA M+ E +EP ++ RL ++ ++ +
Sbjct: 496 TFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRV---EDAFSF 552
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKF------SIKNEVSCNTIIVGYCEN 173
I R GF N + + LV R G+M A K I+ + + +
Sbjct: 553 IKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLELKPKGIETYILLLNMYISTERW 612
Query: 174 GNVAEARELFDQMEHLGVQR 193
+VA R+L Q E +G+ R
Sbjct: 613 QDVARVRKLMKQ-EDVGILR 631
>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 905
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 198/610 (32%), Positives = 310/610 (50%), Gaps = 75/610 (12%)
Query: 8 LDDAKKVFKMMPER----DCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWS 63
LD+ K++ K+ E D ++VT C G V A + + ++ D +V ++
Sbjct: 245 LDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRD-----VVVYN 299
Query: 64 AVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRN 123
A+I Q+G++ EA +RM+++G+ N T S+L AC+ + L GK H +I+ +
Sbjct: 300 ALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISED 359
Query: 124 GFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELF 183
G S+ + N L+ +Y RCGD+ A ++F ++ +S N II GY + EA L+
Sbjct: 360 GHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLY 419
Query: 184 DQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACAD 243
QM+ GV+ G +++ ++S ++S Y +
Sbjct: 420 KQMQSEGVKPGRVTFLHLLSACANSSAYAD------------------------------ 449
Query: 244 MNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMK 303
GK IH + G++S+ + AL+ MY R L+ AQ F+ G
Sbjct: 450 ------GKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFE---------GTQA 494
Query: 304 EDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSSLATME 349
D V +WN+M +LF EM + +L PD T +LS C + +E
Sbjct: 495 RD-----VISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALE 549
Query: 350 RGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYA 409
GKQ+H G DV++G AL++MY +CGSL+ AR + + D++S AM+ A
Sbjct: 550 LGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCA 609
Query: 410 MHGHGKEGIAHFRRILASGFR-PDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPS 467
G + I F ++ GFR PD +F S LSAC HAG + G + F M + Y V P+
Sbjct: 610 DQGEDMKAIELFWQMQNEGFRPPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPT 669
Query: 468 LKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLI 527
++HY C+V LL RA EA I ++P PD+ +W LLG C HGN+ + AA+ +
Sbjct: 670 IEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLLGACRIHGNIALAEHAANNAL 729
Query: 528 ELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASD 587
+L N Y++L+N++A AGRW D+A+ R+ M+ R + K PG SWIE + IH+F A+D
Sbjct: 730 KLNARNPAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAAD 789
Query: 588 RSHDRSEEIY 597
RSH + EIY
Sbjct: 790 RSHPETAEIY 799
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 148/538 (27%), Positives = 245/538 (45%), Gaps = 81/538 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC S+ DA +VFK MP RD ++
Sbjct: 71 MYVKCRSVLDAHQVFKEMPRRD------------------------------------VI 94
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+++I + Q G+ ++A + MQ G PN T S+L AC +L GK+ H I
Sbjct: 95 SWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQI 154
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G+ +P V N L+ +Y +CGD+ A ++F+ S ++ VS NT++ Y + V E
Sbjct: 155 IKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECL 214
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LF QM G+ +++ +++ + S+ DE
Sbjct: 215 GLFGQMSSEGISPDKVTYINLLDAFTTPSMLDE--------------------------- 247
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
GK IH L + GL SD VG ALV M R D+ +A+ AF I + + ++
Sbjct: 248 ---------GKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVY 298
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
+ + A + + M S + + T IL+ACS+ +E GK +H++
Sbjct: 299 NALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISE 358
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
G+ SDV IG AL+ MYA+CG L AR + + DL+S NA++ YA E +
Sbjct: 359 DGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRL 418
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSR 480
++++ + G +P ++FL LSAC ++ + G + + +K + ++++ R
Sbjct: 419 YKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRR 478
Query: 481 AGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE-----FGQIAADRLIELEPNN 533
G L EA + A D + W +++ G HG+ E F ++ + ELEP+N
Sbjct: 479 CGSLMEAQNVFEGT-QARDVISWNSMIAGHAQHGSYETAYKLFQEMQNE---ELEPDN 532
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 139/293 (47%), Gaps = 11/293 (3%)
Query: 228 EPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQM 287
E T+ ++L C L + K IHA + G+ D F+ L+ MY + + ++ A
Sbjct: 24 ETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQ 83
Query: 288 AFDEIENIE-----NLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSAC 342
F E+ + +L+ + GF+ A QLF EM + P+ T IL+AC
Sbjct: 84 VFKEMPRRDVISWNSLISCYAQQGFKKK-----AFQLFEEMQNAGFIPNKITYISILTAC 138
Query: 343 SSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQN 402
S A +E GK++H+ I+ GY D + +L+ MY KCG L AR + IS D+VS N
Sbjct: 139 YSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYN 198
Query: 403 AMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYY 462
ML YA + KE + F ++ + G PD +++++ L A + G L
Sbjct: 199 TMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEE 258
Query: 463 DVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
+ ++ T +V + R G++ A + K I D V++ AL+ HG+
Sbjct: 259 GLNSDIRVGTALVTMCVRCGDVDSAKQAFKGI-ADRDVVVYNALIAALAQHGH 310
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 108/239 (45%), Gaps = 37/239 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +CGSL +A+ VF+ RD +SWNS++ A +G A + + M
Sbjct: 475 MYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEM----------- 523
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
Q E LEP+ T +SVL C + L LGK+ HG I
Sbjct: 524 -------------------------QNEELEPDNITFASVLSGCKNPEALELGKQIHGRI 558
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
T +G + + N L+++Y RCG + A +F ++ +S +I G + G +A
Sbjct: 559 TESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAI 618
Query: 181 ELFDQMEHLGVQRGIIS-WNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
ELF QM++ G + S + S++S L E + +F + G+ PT +G ++
Sbjct: 619 ELFWQMQNEGFRPPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLV 677
>gi|357477865|ref|XP_003609218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510273|gb|AES91415.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1134
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 193/603 (32%), Positives = 305/603 (50%), Gaps = 79/603 (13%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKC ++D+A VF++MP +D VS
Sbjct: 500 MYGKCTAIDNACSVFQLMPSKDTVS----------------------------------- 524
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
W+++I G N EEA+ M+ G+ P+ ++ S L +C+ L L+LG++ HG
Sbjct: 525 -WNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQIHG-- 581
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSC-NTIIVGYCENGNVAEA 179
GF K+ + +VS N ++ Y E ++ E
Sbjct: 582 --EGF----------------------------KWGLDLDVSVSNALLTLYAETDSINEC 611
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVD-NSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
+++F QM + +SWNS I + +A F ++ M+ G P TF ++L
Sbjct: 612 QKVFFQMP----EYDQVSWNSFIGALAKYEASVLQALKYFLEM-MQAGWRPNRVTFINIL 666
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI-ENIEN 297
A + + L G +IHAL + + D + AL+ Y + + + ++ F + E +
Sbjct: 667 AAVSSFSVLGLGHQIHALILKYSVADDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDE 726
Query: 298 LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAY 357
+ G+ + AM L M+ D +T +LSAC+S+AT+ERG +VHA
Sbjct: 727 VSWNSMISGYLHSGILHKAMDLVWPMMQRGQKLDGFTFATVLSACASVATLERGMEVHAC 786
Query: 358 AIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEG 417
A+R +SDV +G+ALVDMYAKCG + +A ++ + ++ S N+M++ YA HGHG++
Sbjct: 787 AVRACLESDVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGQKA 846
Query: 418 IAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVD 476
+ F R+ G PDH++F+ LSAC H G + G + F M Y + P ++H++CMVD
Sbjct: 847 LKIFTRMKQHGQSPDHVTFVGVLSACSHVGLVDEGYKHFKSMGEVYGLSPRIEHFSCMVD 906
Query: 477 LLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG--NLEFGQIAADRLIELEPNNT 534
LL RAG++ + +FIK +PM P+ ++W +LG C N E GQ AA LIELEP N
Sbjct: 907 LLGRAGDVKKIEDFIKTMPMDPNILIWRTVLGACCRANGRNTELGQRAAKMLIELEPQNA 966
Query: 535 GNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSE 594
NYV+L+N+ A G W D+ R M+ + K GCSW+ +D +H F A D++H E
Sbjct: 967 VNYVLLSNMHAAGGNWEDVVEARLAMRKAAVKKDAGCSWVNMKDGVHLFVAGDQTHPEKE 1026
Query: 595 EIY 597
+IY
Sbjct: 1027 KIY 1029
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 125/472 (26%), Positives = 215/472 (45%), Gaps = 50/472 (10%)
Query: 52 LDNETP--NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARL-- 107
L +E P NLVSWS +I G+TQN +EA + + + GL PN + S L AC +
Sbjct: 197 LFDEMPQKNLVSWSCLISGYTQNRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCGS 256
Query: 108 QKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRC-GDMLSALKIFSKFSIKNEVSCNTI 166
+ LG + H +I + +S+ + N L+ +Y C G + A ++F + +N V+ N+I
Sbjct: 257 TGIKLGMQIHAFICKLPCVSDMILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSI 316
Query: 167 IVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDN--SLYDEAFSMFRDLLMR 224
I YC G+ A +LF M+ GV+ + + V SL D + +L R
Sbjct: 317 ISVYCRRGDAVSAFKLFSVMQMEGVELNLRPNEYTLCSLVTAACSLADCGLVLLEQMLTR 376
Query: 225 DGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVA 284
IE + F LR D +VG ALV + RY +
Sbjct: 377 --IEKSGF--------------LR----------------DLYVGSALVNGFARYGLMDC 404
Query: 285 AQMAFDEI--ENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSAC 342
A+M F ++ N + G M G A ++F EM L + + ++ ++LS
Sbjct: 405 AKMIFKQMYDRNAVTMNGLMV--GLARQHQGEEAAKVFKEMKDL-VEINSESLVVLLSTF 461
Query: 343 SSLATMERGK----QVHAYAIRCGY-DSDVHIGTALVDMYAKCGSLKHARLAYKRISTPD 397
+ + ++ GK +VHAY R G D+ + IG ALV+MY KC ++ +A ++ + + D
Sbjct: 462 TEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMPSKD 521
Query: 398 LVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFD 457
VS N+M++ + +E ++ F + +G P + S +S LS+C G + G +
Sbjct: 522 TVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQIHG 581
Query: 458 LMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
+ + + ++ L + + E + ++P D V W + +G
Sbjct: 582 EGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMP-EYDQVSWNSFIGA 632
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 102/425 (24%), Positives = 178/425 (41%), Gaps = 80/425 (18%)
Query: 113 GKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCE 172
H + + GF + F N L+++Y R G+++SA K+F + KN VS + +I GY +
Sbjct: 159 ANHLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQ 218
Query: 173 NGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSF 232
N EA LF +G+IS G+ P F
Sbjct: 219 NRMPDEACSLF---------KGVIS---------------------------SGLLPNHF 242
Query: 233 TFGSVLIACADMNS--LRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLV-AAQMAF 289
GS L AC S ++ G +IHA L SD + L+ MY + A F
Sbjct: 243 AVGSALRACQQCGSTGIKLGMQIHAFICKLPCVSDMILSNVLMSMYSDCSGSIDDAHRVF 302
Query: 290 DEIENIENLLGKMKEDGFEPNVYTWN--------------AMQLFSEM----LSLDLTPD 331
DEI+ F +V TWN A +LFS M + L+L P+
Sbjct: 303 DEIK-------------FRNSV-TWNSIISVYCRRGDAVSAFKLFSVMQMEGVELNLRPN 348
Query: 332 IYTVGIILSACSSLAT--MERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLA 389
YT+ +++A SLA + +Q+ + G+ D+++G+ALV+ +A+ G + A++
Sbjct: 349 EYTLCSLVTAACSLADCGLVLLEQMLTRIEKSGFLRDLYVGSALVNGFARYGLMDCAKMI 408
Query: 390 YKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSI 449
+K++ + V+ N ++ A G+E F+ + + S + LS ++
Sbjct: 409 FKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKE-MKDLVEINSESLVVLLSTFTEFSNL 467
Query: 450 KTGSEFFDLMAYYDVKPSLKHY-----TCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWG 504
K G + Y + L +V++ + + A + +P + D+V W
Sbjct: 468 KEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMP-SKDTVSWN 526
Query: 505 ALLGG 509
+++ G
Sbjct: 527 SMISG 531
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 89/205 (43%), Gaps = 7/205 (3%)
Query: 245 NSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKE 304
+SL +H G D F L+ +Y R +LV+A+ FDE+ +
Sbjct: 154 SSLYDANHLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLI 213
Query: 305 DGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLAT--MERGKQVHAYAIRCG 362
G+ N A LF ++S L P+ + VG L AC + ++ G Q+HA+ +
Sbjct: 214 SGYTQNRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLP 273
Query: 363 YDSDVHIGTALVDMYAKC-GSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHF 421
SD+ + L+ MY+ C GS+ A + I + V+ N++++ Y G F
Sbjct: 274 CVSDMILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLF 333
Query: 422 RRILASG----FRPDHISFLSALSA 442
+ G RP+ + S ++A
Sbjct: 334 SVMQMEGVELNLRPNEYTLCSLVTA 358
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 78/165 (47%), Gaps = 4/165 (2%)
Query: 346 ATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAML 405
+++ +H + G+ DV L+++Y + G+L AR + + +LVS + ++
Sbjct: 154 SSLYDANHLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLI 213
Query: 406 TAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGS--IKTGSEFFDLMAYYD 463
+ Y + E + F+ +++SG P+H + SAL AC GS IK G + +
Sbjct: 214 SGYTQNRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLP 273
Query: 464 VKPSLKHYTCMVDLLSR-AGELGEAYEFIKKIPMAPDSVMWGALL 507
+ ++ + S +G + +A+ +I +SV W +++
Sbjct: 274 CVSDMILSNVLMSMYSDCSGSIDDAHRVFDEIKFR-NSVTWNSII 317
>gi|449458231|ref|XP_004146851.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g17630-like [Cucumis sativus]
gi|449522932|ref|XP_004168479.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g17630-like [Cucumis sativus]
Length = 705
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 188/626 (30%), Positives = 317/626 (50%), Gaps = 76/626 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y + G + DA+KVF P EC N +
Sbjct: 79 IYSRYGLVSDARKVFGSAP-----------------------FECYS----------NFL 105
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
W+++I +GY EA+ + +M+ G+ + T +L A + L ++ K H ++
Sbjct: 106 LWNSIIRANVYHGYCIEALQLYGKMRNYGVLGDGFTFPLLLRASSNLGAFNMCKNLHCHV 165
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ GF ++ V N L+ +Y + M A K+F K IK+ VS NT++ GY N +V A
Sbjct: 166 VQFGFQNHLHVGNELIGMYAKLERMDDARKVFDKMRIKSVVSWNTMVSGYAYNYDVNGAS 225
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+F QME GV+ ++W S++S + +E +F + M+ G+ PT+ VL
Sbjct: 226 RMFHQMELEGVEPNPVTWTSLLSSHARCGHLEETMVLFCKMRMK-GVGPTAEMLAVVLSV 284
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL-- 298
CAD+ +L G+ IH + G F AL+ +Y + + A+ F E++ ++NL
Sbjct: 285 CADLATLNSGQMIHGYMVKGGFNDYLFAKNALITLYGKGGGVGDAEKLFHEMK-VKNLVS 343
Query: 299 ----LGKMKEDG--------------------FEPNVYTWNA--------------MQLF 320
+ E G +PNV TW+A +++F
Sbjct: 344 WNALISSFAESGVYDKALELLSQLEKMEAYPEMKPNVITWSAIICGFASKGLGEESLEVF 403
Query: 321 SEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKC 380
+M ++ + T+ +LS C+ LA + G+++H + IR D +V +G L++MY KC
Sbjct: 404 RKMQLANVKANSVTIASVLSICAMLAALNLGREMHGHVIRARMDDNVLVGNGLINMYTKC 463
Query: 381 GSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSAL 440
GS K + ++++ D +S N+M+ Y HG GK+ +A F ++ SG+RPD ++F++AL
Sbjct: 464 GSFKPGFMVFEKLENRDSISWNSMIAGYGTHGLGKDALATFNHMIKSGYRPDGVTFIAAL 523
Query: 441 SACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPD 499
SAC HAG + G F M + ++P ++HY CMVDLL RAG + EA IK +PM P+
Sbjct: 524 SACSHAGLVAEGHWLFSQMRQNFKIEPEIEHYACMVDLLGRAGLVEEASNIIKGMPMEPN 583
Query: 500 SVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQK 559
+ +W +LL C H + + + AA ++ L TG++++L+N+FA + RW D AR R
Sbjct: 584 AYIWSSLLNSCRMHKDTDLAEEAAAKISNLNSKITGSHMLLSNIFAASCRWEDSARVRIS 643
Query: 560 MKDRRMHKSPGCSWIEDRDEIHKFRA 585
+ + + K PG SWIE + +++ F+A
Sbjct: 644 ARAKGLKKVPGWSWIEVKKKVYMFKA 669
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 112/262 (42%), Gaps = 25/262 (9%)
Query: 211 YDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGG 270
YDE F D L+R N ++ K++H+ + G FV
Sbjct: 33 YDEDLPDFFDHLLRQ------------------CNGIQHSKQVHSATVVTGAYCSAFVSA 74
Query: 271 ALVEMYCRYQDLVAAQMAFDE--IENIENLLGKMKEDGFEPNV---YTWNAMQLFSEMLS 325
LV +Y RY + A+ F E N L + NV Y A+QL+ +M +
Sbjct: 75 RLVSIYSRYGLVSDARKVFGSAPFECYSNFL--LWNSIIRANVYHGYCIEALQLYGKMRN 132
Query: 326 LDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKH 385
+ D +T ++L A S+L K +H + ++ G+ + +H+G L+ MYAK +
Sbjct: 133 YGVLGDGFTFPLLLRASSNLGAFNMCKNLHCHVVQFGFQNHLHVGNELIGMYAKLERMDD 192
Query: 386 ARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVH 445
AR + ++ +VS N M++ YA + F ++ G P+ +++ S LS+
Sbjct: 193 ARKVFDKMRIKSVVSWNTMVSGYAYNYDVNGASRMFHQMELEGVEPNPVTWTSLLSSHAR 252
Query: 446 AGSIKTGSEFFDLMAYYDVKPS 467
G ++ F M V P+
Sbjct: 253 CGHLEETMVLFCKMRMKGVGPT 274
>gi|224122892|ref|XP_002318942.1| predicted protein [Populus trichocarpa]
gi|222857318|gb|EEE94865.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 186/596 (31%), Positives = 307/596 (51%), Gaps = 73/596 (12%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y K G + +A+K+F MPER+ VSW ++++
Sbjct: 157 YCKVGCVFEARKLFDRMPERNLVSWTTMIS------------------------------ 186
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
G+ +EA+G+ M+ N +SVL A + + GK+ H +
Sbjct: 187 ------GYASKQMAKEALGVFGLMRLVEGNLNEFVFTSVLSALVCPEFVDSGKQVHCVVV 240
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
+NG + V+N LV +Y +CG++ +L +F S KN ++ + +I GY + G+ +A +
Sbjct: 241 KNGVLEFVSVLNALVTMYAKCGNLNYSLMLFEMCSDKNAITWSALITGYSQAGDSHKALK 300
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
LF +M + +G+V P+ FT VL AC
Sbjct: 301 LFSKMHY--------------AGFV----------------------PSEFTLVGVLKAC 324
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK 301
+D+ ++ +GK+ H + G ++ + ALV+MY ++ A+ FD + + +L
Sbjct: 325 SDVAAIEEGKQTHGYLLKSGYETQIYTATALVDMYAKFGFTGDARKGFDFLLEPDLVLWT 384
Query: 302 MKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRC 361
G+ N A+ ++ M + P+ T+ +L ACS+LA +E+GKQ+HA I+
Sbjct: 385 SIIAGYVQNGKNEEALSMYGRMQMRKILPNELTMASVLKACSNLAALEQGKQIHARTIKY 444
Query: 362 GYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHF 421
G ++ I +AL MYAKCGSL+ L ++R+ D+VS NAM++ + +GHG+E + F
Sbjct: 445 GLGPELSIRSALSTMYAKCGSLEEGVLIFRRMLQRDIVSWNAMISGLSQNGHGREALELF 504
Query: 422 RRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLLSR 480
+ G +PDHI+F++ LSAC H G +K G +F++M + + P ++HY CMVD+LSR
Sbjct: 505 EEMRLEGTKPDHITFVTVLSACSHMGIVKRGWAYFNMMFDEFCLVPRVEHYACMVDVLSR 564
Query: 481 AGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVML 540
AG+L EA EFI+ + +W LL C +H N E G A ++L+EL + YV+L
Sbjct: 565 AGKLNEAKEFIESAIIDHGMCLWRILLPACRNHCNYELGAYAGEKLMELGSRESSAYVLL 624
Query: 541 ANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEI 596
++++ GR +D+ R R+ MK R + K GCSWIE + +H F D+ H + EEI
Sbjct: 625 SSIYTAMGRLADVVRVRRMMKVRGVRKETGCSWIELKSHVHVFVVGDQIHPQIEEI 680
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 104/431 (24%), Positives = 191/431 (44%), Gaps = 43/431 (9%)
Query: 92 PNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSN-PFVVNGLVDVYRRCGDMLSALK 150
P R+ ++L A + L G+ H +I + ++S+ ++ N L+ Y +CG + A
Sbjct: 5 PQNRSFYNLLIQYADQKSLKKGQILHAHIIKIPYLSSCNYLANNLIKFYAKCGHLHGAKL 64
Query: 151 IFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSL 210
+F KN VS N +I G NG S S +V
Sbjct: 65 VFENLKHKNVVSYNCLIHGLSHNG-------------------------SKGSNFV---- 95
Query: 211 YDEAFSMFRDLLMRDGIEPTSFTFGSVLIACA-DMNSLRKGKEIHALAIALGLQSDTFVG 269
+FR ++ + I P + TF V A A ++ +++H L I D FVG
Sbjct: 96 ----LELFRRMIA-NNILPDAHTFPGVFTAAALNLGCNFDARQVHVLGIKTASIDDVFVG 150
Query: 270 GALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLT 329
+LV YC+ + A+ FD + + G+ A+ +F M ++
Sbjct: 151 SSLVNFYCKVGCVFEARKLFDRMPERNLVSWTTMISGYASKQMAKEALGVFGLMRLVEGN 210
Query: 330 PDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLA 389
+ + +LSA ++ GKQVH ++ G V + ALV MYAKCG+L ++ +
Sbjct: 211 LNEFVFTSVLSALVCPEFVDSGKQVHCVVVKNGVLEFVSVLNALVTMYAKCGNLNYSLML 270
Query: 390 YKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSI 449
++ S + ++ +A++T Y+ G + + F ++ +GF P + + L AC +I
Sbjct: 271 FEMCSDKNAITWSALITGYSQAGDSHKALKLFSKMHYAGFVPSEFTLVGVLKACSDVAAI 330
Query: 450 KTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEA---YEFIKKIPMAPDSVMWGAL 506
+ G + + + + T +VD+ ++ G G+A ++F+ + PD V+W ++
Sbjct: 331 EEGKQTHGYLLKSGYETQIYTATALVDMYAKFGFTGDARKGFDFL----LEPDLVLWTSI 386
Query: 507 LGGCVSHGNLE 517
+ G V +G E
Sbjct: 387 IAGYVQNGKNE 397
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 98/250 (39%), Gaps = 72/250 (28%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G DA+K F + E D V W S++ NG
Sbjct: 358 MYAKFGFTGDARKGFDFLLEPDLVLWTSIIAGYVQNG----------------------- 394
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+EEA+ M RMQ + PN T++SVL AC+ L L GK+ H
Sbjct: 395 -------------KNEEALSMYGRMQMRKILPNELTMASVLKACSNLAALEQGKQIHART 441
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G + + L +Y +CG + + IF + ++ VS N +I G +NG+ EA
Sbjct: 442 IKYGLGPELSIRSALSTMYAKCGSLEEGVLIFRRMLQRDIVSWNAMISGLSQNGHGREAL 501
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
ELF++M +G +P TF +VL A
Sbjct: 502 ELFEEMR------------------------------------LEGTKPDHITFVTVLSA 525
Query: 241 CADMNSLRKG 250
C+ M +++G
Sbjct: 526 CSHMGIVKRG 535
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 60/117 (51%), Gaps = 2/117 (1%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGSL++ +F+ M +RD VSWN++++ + NG EALE E M L+ P+ +
Sbjct: 459 MYAKCGSLEEGVLIFRRMLQRDIVSWNAMISGLSQNGHGREALELFEEM-RLEGTKPDHI 517
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEF 116
++ V+ + G + M E L P + ++ +R KL+ KEF
Sbjct: 518 TFVTVLSACSHMGIVKRGWAYFNMMFDEFCLVPRVEHYACMVDVLSRAGKLNEAKEF 574
>gi|357119036|ref|XP_003561252.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g71490-like [Brachypodium distachyon]
Length = 692
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 180/569 (31%), Positives = 307/569 (53%), Gaps = 34/569 (5%)
Query: 50 SSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQK 109
SSL + + ++ +I ++G+ A+ +M + P+A T SVL ACA
Sbjct: 118 SSLAADATCPLPYNILISSCLRHGFPRHALAAYQQMARSAVLPDAFTYPSVLRACAEAGD 177
Query: 110 LSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVG 169
L+LG+ H + G + F N LV +Y + GD+++A K+F + K+ VS N++I
Sbjct: 178 LALGRAVHLHGLATGVGGHLFFQNALVSMYAKSGDLVAARKVFEGMAQKDVVSWNSMISA 237
Query: 170 YCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDG--I 227
Y G +A ELF++M + ++WN++ Y++ + A + R+++ DG +
Sbjct: 238 YVAVGQWVQAVELFERMRAEEAEVNSVTWNTIAGVYINTRDHRAAVGLIREMV-SDGAAV 296
Query: 228 EPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQM 287
+ + GS AC+ + LR GKEIH LA+ + V AL+ MY R + + +A +
Sbjct: 297 DFVTLVIGSN--ACSRVGWLRLGKEIHGLAVRMNCDGVESVANALITMYARCKHMDSACL 354
Query: 288 AFDEIENIENLLGKMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIY 333
F + P V TWN M +L EM+ + P+
Sbjct: 355 LFKMLAC--------------PGVVTWNTMIASFALSDEAEEASRLVHEMVGAGVQPNYV 400
Query: 334 TVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRI 393
TV +L+ C+ +A ++ G+++H++ ++ G+ + +L+DMY+K G L A+ + +
Sbjct: 401 TVVTLLALCARVANLQHGQELHSHIVKNGFKGYRLLWNSLIDMYSKSGXLSVAQNVFDTM 460
Query: 394 STPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGS 453
D++S M+ Y M G G + F +++ SG +PDHIS ++ LSAC H+G + G
Sbjct: 461 DDRDMISYTXMIAGYGMQGKGTIALRLFDQMIDSGIKPDHISMVTVLSACSHSGLVTEGE 520
Query: 454 EFFDLM-AYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVS 512
+ FD M + Y +KP ++HY+CMVDL +R+G L +A + + P S+MW AL+G C
Sbjct: 521 KLFDKMTSSYGIKPQMEHYSCMVDLYARSGLLEKAEGMLNESSSPPTSMMWAALVGACHD 580
Query: 513 HGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCS 572
GN+ G+ AA RL+E++ N G+YV++AN++A AG W +LA R+ M+D + K+PG +
Sbjct: 581 RGNIIIGERAARRLLEMKTENAGHYVLIANMYAAAGCWDELATVRKLMRDLGVTKAPGLA 640
Query: 573 WIEDRDEIHKFRASDRSHDRSEEIYTIID 601
W++ R+ F DRS+ + EIY ++D
Sbjct: 641 WVDLRNGFAPFLVGDRSNPLAPEIYEVLD 669
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 110/401 (27%), Positives = 182/401 (45%), Gaps = 46/401 (11%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G L A+KVF+ M ++D VSWNS+++A A G ++A+E ERM + + E N V
Sbjct: 206 MYAKSGDLVAARKVFEGMAQKDVVSWNSMISAYVAVGQWVQAVELFERMRAEEAEV-NSV 264
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+ + G + A+G++ M ++G + TL AC+R+ L LGKE HG
Sbjct: 265 TWNTIAGVYINTRDHRAAVGLIREMVSDGAAVDFVTLVIGSNACSRVGWLRLGKEIHGLA 324
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R V N L+ +Y RC M SA +F + V+ NT+I + + EA
Sbjct: 325 VRMNCDGVESVANALITMYARCKHMDSACLLFKMLACPGVVTWNTMIASFALSDEAEEAS 384
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
L +M GVQ P T ++L
Sbjct: 385 RLVHEMVGAGVQ------------------------------------PNYVTVVTLLAL 408
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA + +L+ G+E+H+ + G + + +L++MY + L AQ FD +++ + +
Sbjct: 409 CARVANLQHGQELHSHIVKNGFKGYRLLWNSLIDMYSKSGXLSVAQNVFDTMDDRDMISY 468
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG-----KQVH 355
G+ A++LF +M+ + PD ++ +LSACS + G K
Sbjct: 469 TXMIAGYGMQGKGTIALRLFDQMIDSGIKPDHISMVTVLSACSHSGLVTEGEKLFDKMTS 528
Query: 356 AYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTP 396
+Y I+ + + +VD+YA+ G L+ A S+P
Sbjct: 529 SYGIK----PQMEHYSCMVDLYARSGLLEKAEGMLNESSSP 565
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 75/350 (21%), Positives = 135/350 (38%), Gaps = 51/350 (14%)
Query: 245 NSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLV--AAQMAFDEIENIEN--LLG 300
+ LR G ++H L+++LGL + L+ +Y L+ A+ +A D + L+
Sbjct: 76 SDLRLGVQLHGLSLSLGLSRHPLLLPRLLSLYSSQPYLLPFASSLAADATCPLPYNILIS 135
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
GF +A+ + +M + PD +T +L AC+ + G+ VH + +
Sbjct: 136 SCLRHGFPR-----HALAAYQQMARSAVLPDAFTYPSVLRACAEAGDLALGRAVHLHGLA 190
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
G + ALV MYAK G L AR ++ ++ D+VS N+M++AY G + +
Sbjct: 191 TGVGGHLFFQNALVSMYAKSGDLVAARKVFEGMAQKDVVSWNSMISAYVAVGQWVQAVEL 250
Query: 421 F-----------------------------------RRILASGFRPDHISFLSALSACVH 445
F R +++ G D ++ + +AC
Sbjct: 251 FERMRAEEAEVNSVTWNTIAGVYINTRDHRAAVGLIREMVSDGAAVDFVTLVIGSNACSR 310
Query: 446 AGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGA 505
G ++ G E L + ++ + +R + A K + P V W
Sbjct: 311 VGWLRLGKEIHGLAVRMNCDGVESVANALITMYARCKHMDSACLLFKMLA-CPGVVTWNT 369
Query: 506 LLGGCVSHGNLEFGQIAADRLIE--LEPNNTGNYVMLANLFAYAGRWSDL 553
++ E A RL+ + NYV + L A R ++L
Sbjct: 370 MIASFALSDEAE----EASRLVHEMVGAGVQPNYVTVVTLLALCARVANL 415
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 59/139 (42%), Gaps = 38/139 (27%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWN--------------------------------- 27
MY K G L A+ VF M +RD +S+
Sbjct: 443 MYSKSGXLSVAQNVFDTMDDRDMISYTXMIAGYGMQGKGTIALRLFDQMIDSGIKPDHIS 502
Query: 28 --SVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRM 85
+V++AC+ +GLV E + ++M+S P + +S ++ + ++G E+A GML
Sbjct: 503 MVTVLSACSHSGLVTEGEKLFDKMTSSYGIKPQMEHYSCMVDLYARSGLLEKAEGMLNES 562
Query: 86 QAEGLEPNARTLSSVLPAC 104
+ P + ++++ AC
Sbjct: 563 SS---PPTSMMWAALVGAC 578
>gi|225456517|ref|XP_002281018.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 624
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 179/543 (32%), Positives = 279/543 (51%), Gaps = 35/543 (6%)
Query: 57 PNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEF 116
PN+ SW+ + ++++ + E I + M G P+ + VL ACARL L G+E
Sbjct: 90 PNVFSWNFMFRAYSRSSFPAETIALYNLMLRNGTLPDNYSFPFVLKACARLSLLHKGREI 149
Query: 117 HGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNV 176
H + G + FV N L+ + CG V
Sbjct: 150 HSSTLKLGVHLDVFVQNALISAFSSCG-------------------------------AV 178
Query: 177 AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGS 236
AR +FD + L R ++SWNSMISGY+ + Y+ A +F +LL + P T S
Sbjct: 179 EAARAVFDMLPAL--VRDVVSWNSMISGYLQSHRYELALKVFWELLGDGSLSPDEVTLVS 236
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
L C + L GK+IH L G D FVG +L++MY + + A+ FD I +
Sbjct: 237 ALSVCGRLGLLDLGKKIHGLFTGSGFVLDVFVGSSLIDMYSKCGQIEDARKVFDRIPHRN 296
Query: 297 NLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHA 356
+ G+ + A++LF EM D T+ +LSAC + +G+ +H
Sbjct: 297 TVCWTSMIAGYAQSDLFKEAIELFREMQIGGFAADAATIACVLSACGHWGALAQGRWIHL 356
Query: 357 YAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKE 416
Y R + D++ AL+ MY+KCG ++ A + ++ PD+ S +A+++ AM+G +
Sbjct: 357 YCERNSIEMDLNARNALIGMYSKCGDIQKALEIFHGLTQPDIFSWSAVISGLAMNGESDK 416
Query: 417 GIAHFRRI-LASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCM 474
+ F ++ + S RP+ I+FL L AC H G + G +F+ M Y++ P ++HY CM
Sbjct: 417 ALHLFSQMEMISDIRPNEITFLGVLCACNHGGFVDKGLYYFNAMTQIYNLTPGIEHYGCM 476
Query: 475 VDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNT 534
VDLL RA L EA +FI+ +P+ PD V+W +LL C +HGN+E + AA ++ ELEP
Sbjct: 477 VDLLGRANLLVEAEKFIRTLPIQPDVVIWRSLLFACRNHGNIELAEFAAKQIEELEPRRC 536
Query: 535 GNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSE 594
G V+L+N++A A RW D+ R R+ M +R+ K PGCS++E +H+ +DRSH
Sbjct: 537 GARVLLSNVYASASRWGDVKRVRKDMATQRIKKQPGCSFVEIDGLVHELFVADRSHPEMG 596
Query: 595 EIY 597
IY
Sbjct: 597 AIY 599
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 106/369 (28%), Positives = 176/369 (47%), Gaps = 33/369 (8%)
Query: 161 VSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRD 220
VS + + + A +R LF Q+ + + SWN M Y +S E +++ +
Sbjct: 62 VSSKLLYYSLSHDHDFAFSRTLFFQIH----KPNVFSWNFMFRAYSRSSFPAETIALY-N 116
Query: 221 LLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQ 280
L++R+G P +++F VL ACA ++ L KG+EIH+ + LG+ D FV AL+ +
Sbjct: 117 LMLRNGTLPDNYSFPFVLKACARLSLLHKGREIHSSTLKLGVHLDVFVQNALISAFSSCG 176
Query: 281 DLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAM--------------QLFSEMLS- 325
+ AA+ FD +L + D V +WN+M ++F E+L
Sbjct: 177 AVEAARAVFD-------MLPALVRD-----VVSWNSMISGYLQSHRYELALKVFWELLGD 224
Query: 326 LDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKH 385
L+PD T+ LS C L ++ GK++H G+ DV +G++L+DMY+KCG ++
Sbjct: 225 GSLSPDEVTLVSALSVCGRLGLLDLGKKIHGLFTGSGFVLDVFVGSSLIDMYSKCGQIED 284
Query: 386 ARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVH 445
AR + RI + V +M+ YA KE I FR + GF D + LSAC H
Sbjct: 285 ARKVFDRIPHRNTVCWTSMIAGYAQSDLFKEAIELFREMQIGGFAADAATIACVLSACGH 344
Query: 446 AGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGA 505
G++ G ++ L ++ + S+ G++ +A E + PD W A
Sbjct: 345 WGALAQGRWIHLYCERNSIEMDLNARNALIGMYSKCGDIQKALEIFHGLTQ-PDIFSWSA 403
Query: 506 LLGGCVSHG 514
++ G +G
Sbjct: 404 VISGLAMNG 412
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 106/416 (25%), Positives = 183/416 (43%), Gaps = 53/416 (12%)
Query: 14 VFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNG 73
K+ D N++++A ++ G V A + + +L ++VSW+++I G+ Q+
Sbjct: 153 TLKLGVHLDVFVQNALISAFSSCGAVEAARAVFDMLPAL---VRDVVSWNSMISGYLQSH 209
Query: 74 YDEEAIGMLFRMQAEG-LEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVV 132
E A+ + + + +G L P+ TL S L C RL L LGK+ HG T +GF+ + FV
Sbjct: 210 RYELALKVFWELLGDGSLSPDEVTLVSALSVCGRLGLLDLGKKIHGLFTGSGFVLDVFVG 269
Query: 133 NGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQ 192
+ L+D+Y +CG + A K+F + +N V ++I GY ++ EA ELF +M+
Sbjct: 270 SSLIDMYSKCGQIEDARKVFDRIPHRNTVCWTSMIAGYAQSDLFKEAIELFREMQ----- 324
Query: 193 RGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKE 252
I G+ ++ T VL AC +L +G+
Sbjct: 325 ---------IGGFAADAA----------------------TIACVLSACGHWGALAQGRW 353
Query: 253 IHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVY 312
IH ++ D AL+ MY + D+ A F + + G N
Sbjct: 354 IHLYCERNSIEMDLNARNALIGMYSKCGDIQKALEIFHGLTQPDIFSWSAVISGLAMNGE 413
Query: 313 TWNAMQLFSEMLSL-DLTPDIYTVGIILSACSSLATMERG-----KQVHAYAIRCGYDSD 366
+ A+ LFS+M + D+ P+ T +L AC+ +++G Y + G +
Sbjct: 414 SDKALHLFSQMEMISDIRPNEITFLGVLCACNHGGFVDKGLYYFNAMTQIYNLTPGIE-- 471
Query: 367 VHIGTALVDMYAKCGSLKHARLAYKRIST-PDLVSQNAMLTAYAMHGHGKEGIAHF 421
H G +VD+ + L A + + PD+V ++L +A HG +A F
Sbjct: 472 -HYG-CMVDLLGRANLLVEAEKFIRTLPIQPDVVIWRSLL--FACRNHGNIELAEF 523
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 130/303 (42%), Gaps = 52/303 (17%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG ++DA+KVF +P R+ V W S++ A + L EA+E
Sbjct: 275 MYSKCGQIEDARKVFDRIPHRNTVCWTSMIAGYAQSDLFKEAIE---------------- 318
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFR-MQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
LFR MQ G +A T++ VL AC L+ G+ H Y
Sbjct: 319 ---------------------LFREMQIGGFAADAATIACVLSACGHWGALAQGRWIHLY 357
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
RN + N L+ +Y +CGD+ AL+IF + + S + +I G NG +A
Sbjct: 358 CERNSIEMDLNARNALIGMYSKCGDIQKALEIFHGLTQPDIFSWSAVISGLAMNGESDKA 417
Query: 180 RELFDQMEHLG-VQRGIISWNSMI-----SGYVDNSLYDEAFSMFRDLLMRDGIEPTSFT 233
LF QME + ++ I++ ++ G+VD LY F + + P
Sbjct: 418 LHLFSQMEMISDIRPNEITFLGVLCACNHGGFVDKGLY-----YFNAMTQIYNLTPGIEH 472
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
+G ++ N L + ++ L +Q D + +L+ + ++ A+ A +IE
Sbjct: 473 YGCMVDLLGRANLLVEAEK---FIRTLPIQPDVVIWRSLLFACRNHGNIELAEFAAKQIE 529
Query: 294 NIE 296
+E
Sbjct: 530 ELE 532
>gi|449480326|ref|XP_004155862.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 939
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 179/616 (29%), Positives = 317/616 (51%), Gaps = 103/616 (16%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K L +A++VF M +D V+WN+
Sbjct: 266 MYFKFERLREARRVFSKMAVKDSVTWNT-------------------------------- 293
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+I G+ Q G E ++ + M +G P+ +++S + AC + L +GK H Y+
Sbjct: 294 ----MICGYAQLGRHEASVKLFMDM-IDGFVPDMLSITSTIRACGQSGDLQVGKFVHKYL 348
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+GF + N L+D+Y +CGD+L+A ++F K+ V+ N++I GY ++G E
Sbjct: 349 IGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGL 408
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
E F M+ ++R +P S TF +L
Sbjct: 409 ESFKMMK---MER----------------------------------KPDSVTFVLLLSI 431
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
+ + + +G+ IH I G +++ +G +L+++Y + E++++ +
Sbjct: 432 FSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKC----------GEMDDLLKVFS 481
Query: 301 KMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSSLA 346
M ++ +WN + Q+ +EM + L PD TV IL CS LA
Sbjct: 482 YMSAH----DIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLA 537
Query: 347 TMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLT 406
+GK++H Y + G++S+V IG AL++MY+KCGSL++ +K + D+V+ A+++
Sbjct: 538 VRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALIS 597
Query: 407 AYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVK 465
A+ M+G GK+ + F+ + SG PD ++F++ + AC H+G +K G FFD M Y+++
Sbjct: 598 AFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFDRMKTDYNLE 657
Query: 466 PSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADR 525
P ++HY C+VDLL+R+G L +A EFI +PM PD+ +WGALL C + GN Q + +
Sbjct: 658 PRMEHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACRARGNTNIAQRVSKK 717
Query: 526 LIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRA 585
++EL ++TG YV+++N++A G+W + R MK + + K PG SWIE + ++ FR
Sbjct: 718 ILELNSDDTGYYVLVSNIYATLGKWDQVKTVRNSMKTKGLKKEPGSSWIEIQKRVYVFRT 777
Query: 586 SDRSHDRSEEIYTIID 601
D+S ++ +++ +++
Sbjct: 778 GDKSFEQYDKVKDLLE 793
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 126/514 (24%), Positives = 224/514 (43%), Gaps = 75/514 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY + LD+A+ VF+ M RD VSWNS+++ +NG
Sbjct: 165 MYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGF---------------------- 202
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
W E+A+ M + + G+ P+ T+SSVL AC L + G HG I
Sbjct: 203 -W-------------EDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVI 248
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G + + NGL+ +Y + + A ++FSK ++K+ V+ NT+I GY + G
Sbjct: 249 EKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGR----- 303
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
++ + +F D++ DG P + S + A
Sbjct: 304 ------------------------------HEASVKLFMDMI--DGFVPDMLSITSTIRA 331
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C L+ GK +H I G + DT L++MY + DL+AAQ FD + +++
Sbjct: 332 CGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTW 391
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
+G+ + Y ++ F +M+ ++ PD T ++LS S LA + +G+ +H I+
Sbjct: 392 NSLINGYTQSGYYKEGLESF-KMMKMERKPDSVTFVLLLSIFSQLADINQGRGIHCDVIK 450
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
G+++++ IG +L+D+YAKCG + + +S D++S N ++ + G
Sbjct: 451 FGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQM 510
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSR 480
+ G PD + L L C + G E + + ++ ++++ S+
Sbjct: 511 INEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSK 570
Query: 481 AGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
G L + K + D V W AL+ +G
Sbjct: 571 CGSLENCIKVFKYMK-EKDVVTWTALISAFGMYG 603
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 122/501 (24%), Positives = 219/501 (43%), Gaps = 75/501 (14%)
Query: 19 PERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEA 78
P + WNS++ A NGL FTQ A
Sbjct: 82 PTNNVYLWNSIIRALTHNGL------------------------------FTQ------A 105
Query: 79 IGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDV 138
+G M+ + L+P+A T SV+ +CAR+ L LG H + GF S+ ++ N L+D+
Sbjct: 106 LGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYIGNALIDM 165
Query: 139 YRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISW 198
Y R D+ +A +F + S ++ VS N++I GYC NG
Sbjct: 166 YSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNG------------------------ 201
Query: 199 NSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAI 258
+++A M+ M G+ P FT SVL+AC + ++++G +H +
Sbjct: 202 -----------FWEDALDMYHKFRMT-GMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIE 249
Query: 259 ALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQ 318
+G+ D +G L+ MY +++ L A+ F ++ +++ G+ +++
Sbjct: 250 KIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVK 309
Query: 319 LFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYA 378
LF +M+ PD+ ++ + AC ++ GK VH Y I G++ D L+DMYA
Sbjct: 310 LFMDMID-GFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYA 368
Query: 379 KCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLS 438
KCG L A+ + D V+ N+++ Y G+ KEG+ F +++ +PD ++F+
Sbjct: 369 KCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESF-KMMKMERKPDSVTFVL 427
Query: 439 ALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAP 498
LS I G + + + L ++D+ ++ GE+ + + + A
Sbjct: 428 LLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMS-AH 486
Query: 499 DSVMWGALLGGCVSHGNLEFG 519
D + W ++ V + G
Sbjct: 487 DIISWNTVIASSVHFDDCTVG 507
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 112/457 (24%), Positives = 209/457 (45%), Gaps = 40/457 (8%)
Query: 91 EPNARTL-SSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSAL 149
EP+ L SS+L + + + H I +G + L+ Y + D +S++
Sbjct: 15 EPSQEFLRSSLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSV 74
Query: 150 KIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNS 209
+F S N V WNS+I N
Sbjct: 75 SVFRSISPTNNVYL----------------------------------WNSIIRALTHNG 100
Query: 210 LYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVG 269
L+ +A + ++ + ++P +FTF SV+ +CA + L G +H A+ +G +SD ++G
Sbjct: 101 LFTQALGYYTEMREKK-LQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYIG 159
Query: 270 GALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLT 329
AL++MY R+ DL A+ F+E+ N +++ G+ N + +A+ ++ + +
Sbjct: 160 NALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMV 219
Query: 330 PDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLA 389
PD +T+ +L AC SL ++ G VH + G DV IG L+ MY K L+ AR
Sbjct: 220 PDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRV 279
Query: 390 YKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSI 449
+ +++ D V+ N M+ YA G + + F ++ GF PD +S S + AC +G +
Sbjct: 280 FSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMI-DGFVPDMLSITSTIRACGQSGDL 338
Query: 450 KTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
+ G + + ++D+ ++ G+L A E DSV W +L+ G
Sbjct: 339 QVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTK-CKDSVTWNSLING 397
Query: 510 CVSHGNLEFGQIAADRLIELEPN-NTGNYVMLANLFA 545
G + G + + +++++E ++ +V+L ++F+
Sbjct: 398 YTQSGYYKEG-LESFKMMKMERKPDSVTFVLLLSIFS 433
>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
Length = 837
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 183/598 (30%), Positives = 302/598 (50%), Gaps = 73/598 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K GS+D A++VF + +RD ++N
Sbjct: 206 MYVKGGSMDGARQVFDGLYKRDVSTFN--------------------------------- 232
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+IGG+ ++G E+A + +RMQ EG +PN + S+L C+ + L+ GK H
Sbjct: 233 ---VMIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQC 289
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
G + + V L+ +Y CG ++ AR
Sbjct: 290 MNTGLVDDVRVATALIRMYMGCG-------------------------------SIEGAR 318
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+FD+M+ R ++SW MI GY +NS ++AF +F + +GI+P T+ ++ A
Sbjct: 319 RVFDKMK----VRDVVSWTVMIRGYAENSNIEDAFGLFATM-QEEGIQPDRITYIHIINA 373
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA L +EIH+ + G +D V ALV MY + + A+ FD + + +
Sbjct: 374 CASSADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQVFDAMSRRDVVSW 433
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
+ N A + F M ++ PD+ T +L+AC L ++ G +++ AI+
Sbjct: 434 SAMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYINLLNACGHLGALDLGMEIYTQAIK 493
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
S + +G AL++M K GS++ AR ++ + D+V+ N M+ Y++HG+ +E +
Sbjct: 494 ADLVSHIPVGNALINMNVKHGSIERARYIFENMVQRDVVTWNVMIGGYSLHGNAREALDL 553
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFD-LMAYYDVKPSLKHYTCMVDLLS 479
F R+L FRP+ ++F+ LSAC AG ++ G FF L+ + P+++ Y CMVDLL
Sbjct: 554 FDRMLKERFRPNSVTFVGVLSACSRAGFVEEGRRFFSYLLDGRGIVPTMELYGCMVDLLG 613
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
RAGEL EA I ++P+ P+S +W LL C +GNL+ + AA+R + EP + YV
Sbjct: 614 RAGELDEAELLINRMPLKPNSSIWSTLLAACRIYGNLDVAERAAERCLMSEPYDGAVYVQ 673
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
L++++A AG W ++A+ R+ M+ R + K GC+WIE ++H F DRSH ++ EIY
Sbjct: 674 LSHMYAAAGMWENVAKVRKVMESRGVRKEQGCTWIEVEGKLHTFVVEDRSHPQAGEIY 731
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 139/494 (28%), Positives = 247/494 (50%), Gaps = 41/494 (8%)
Query: 43 LECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLP 102
LE + S++N+T +V+W+A+I G+ Q G+ +EA + +M E +EP+ T VL
Sbjct: 113 LEARQTFDSVENKT--VVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLD 170
Query: 103 ACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVS 162
AC+ L LGKEFH + + GF+S+ + LV +Y + G M A ++F ++ +
Sbjct: 171 ACSSPAGLKLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVST 230
Query: 163 CNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLL 222
N +I GY ++G+ +A +LF +M+
Sbjct: 231 FNVMIGGYAKSGDGEKAFQLFYRMQ----------------------------------- 255
Query: 223 MRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDL 282
++G +P +F S+L C+ +L GK +HA + GL D V AL+ MY +
Sbjct: 256 -QEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRVATALIRMYMGCGSI 314
Query: 283 VAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSAC 342
A+ FD+++ + + + G+ N +A LF+ M + PD T I++AC
Sbjct: 315 EGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHIINAC 374
Query: 343 SSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQN 402
+S A + +++H+ +R G+ +D+ + TALV MYAKCG++K AR + +S D+VS +
Sbjct: 375 ASSADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQVFDAMSRRDVVSWS 434
Query: 403 AMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYY 462
AM+ AY +G G+E F + + PD +++++ L+AC H G++ G E +
Sbjct: 435 AMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYINLLNACGHLGALDLGMEIYTQAIKA 494
Query: 463 DVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIA 522
D+ + ++++ + G + E +I + + D V W ++GG HGN
Sbjct: 495 DLVSHIPVGNALINMNVKHGSI-ERARYIFENMVQRDVVTWNVMIGGYSLHGNAREALDL 553
Query: 523 ADRLIE--LEPNNT 534
DR+++ PN+
Sbjct: 554 FDRMLKERFRPNSV 567
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 114/422 (27%), Positives = 196/422 (46%), Gaps = 37/422 (8%)
Query: 93 NARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIF 152
++RT + C L+ LGK+ +I ++G N + +N L+ ++ CG+ML
Sbjct: 60 DSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNML------ 113
Query: 153 SKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYD 212
EAR+ FD +E+ + +++WN++I+GY
Sbjct: 114 -------------------------EARQTFDSVEN----KTVVTWNAIIAGYAQLGHVK 144
Query: 213 EAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGAL 272
EAF++FR ++ + +EP+ TF VL AC+ L+ GKE HA I +G SD +G AL
Sbjct: 145 EAFALFRQMV-DEAMEPSIITFLIVLDACSSPAGLKLGKEFHAQVIKVGFVSDFRIGTAL 203
Query: 273 VEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDI 332
V MY + + A+ FD + + + G+ + A QLF M P+
Sbjct: 204 VSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNR 263
Query: 333 YTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKR 392
+ IL CS+ + GK VHA + G DV + TAL+ MY CGS++ AR + +
Sbjct: 264 ISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRVATALIRMYMGCGSIEGARRVFDK 323
Query: 393 ISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTG 452
+ D+VS M+ YA + + ++ F + G +PD I+++ ++AC + +
Sbjct: 324 MKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHIINACASSADLSLA 383
Query: 453 SEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVS 512
E + L T +V + ++ G + +A + + D V W A++G V
Sbjct: 384 REIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQVFDAMSR-RDVVSWSAMIGAYVE 442
Query: 513 HG 514
+G
Sbjct: 443 NG 444
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 154/330 (46%), Gaps = 7/330 (2%)
Query: 231 SFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFD 290
S T+ + C + GK++ I G Q + + L++++ +++ A+ FD
Sbjct: 61 SRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQTFD 120
Query: 291 EIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMER 350
+EN + G+ + A LF +M+ + P I T I+L ACSS A ++
Sbjct: 121 SVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLKL 180
Query: 351 GKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAM 410
GK+ HA I+ G+ SD IGTALV MY K GS+ AR + + D+ + N M+ YA
Sbjct: 181 GKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAK 240
Query: 411 HGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKH 470
G G++ F R+ GF+P+ ISFLS L C ++ G + ++
Sbjct: 241 SGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRV 300
Query: 471 YTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE--FGQIAADRLIE 528
T ++ + G + A K+ + D V W ++ G + N+E FG A +
Sbjct: 301 ATALIRMYMGCGSIEGARRVFDKMKV-RDVVSWTVMIRGYAENSNIEDAFGLFATMQEEG 359
Query: 529 LEPNNTGNYVMLANLFAYAGRWSDLARTRQ 558
++P+ Y+ + N A + +DL+ R+
Sbjct: 360 IQPDRI-TYIHIINACASS---ADLSLARE 385
>gi|115439575|ref|NP_001044067.1| Os01g0715900 [Oryza sativa Japonica Group]
gi|20160882|dbj|BAB89820.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113533598|dbj|BAF05981.1| Os01g0715900 [Oryza sativa Japonica Group]
gi|125571815|gb|EAZ13330.1| hypothetical protein OsJ_03251 [Oryza sativa Japonica Group]
Length = 608
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 174/552 (31%), Positives = 296/552 (53%), Gaps = 9/552 (1%)
Query: 51 SLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKL 110
++ TP L +I ++ +E + + G + + V+ +CA L
Sbjct: 44 AVPRPTPALCG--TLISALSRLCSHQELLDAFSSLHRRGSDVPPGCVPLVVKSCAILAAS 101
Query: 111 SLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGY 170
GK+ H + G + + FV LVD Y + GDM A+K+F + +K+ + N +I GY
Sbjct: 102 RQGKQVHCHAIVRGLLGDIFVQTALVDFYAKNGDMDCAVKVFDEMPVKDPIPMNCLITGY 161
Query: 171 CENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPT 230
++G+V +AR LFD M V+R SWNSMI+ Y Y EA +FR +L +G P
Sbjct: 162 SKSGDVVKARRLFDGM----VRRTSASWNSMIACYAHGGEYQEALRLFRRML-SEGARPN 216
Query: 231 SFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFD 290
+ T ++ CA L GK +L LQ + V AL+EMY + + + A+ FD
Sbjct: 217 AITIATMFSICAKTGDLETGKWARSLIAEQDLQ-NMIVHTALMEMYVKCRAIDEARREFD 275
Query: 291 EIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMER 350
++ + + G+ N +++LF M + P+ T+ +LSAC+ L + E
Sbjct: 276 RMQQRDVVAWSTMIAGYAQNGRPHESLELFERMKATSCKPNEVTLVGVLSACAQLGSDEL 335
Query: 351 GKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAM 410
G Q+ ++ ++G+AL+DMY KCG + AR + R+ +++ N+M+ A+
Sbjct: 336 GGQIGSHVESQNLPLTSYLGSALIDMYTKCGHVGRARSVFNRMEHKVVITWNSMMRGLAL 395
Query: 411 HGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFF-DLMAYYDVKPSLK 469
+G ++ I ++ + +P+ I+F++ L+AC HAG + G FF ++ + V P ++
Sbjct: 396 NGFAQDAITLYKEMTEEDVQPNEITFVALLTACTHAGLVDQGMSFFKEMKTIHHVSPQVE 455
Query: 470 HYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIEL 529
H C+VDLL ++G L EAY+FI + + P++V+W LL C +H ++E ++AA +L+ L
Sbjct: 456 HCACIVDLLCKSGRLREAYKFICDMEVEPNAVIWSTLLSACRAHADVELAKLAASKLLVL 515
Query: 530 EPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRS 589
EP+N+ YV+L+N++A AG W D+ R M+ + + K SWIE E+HKF D
Sbjct: 516 EPDNSSIYVLLSNIYADAGLWGDVREIRDLMRSKNVQKLSAYSWIELDGEVHKFLVQDTY 575
Query: 590 HDRSEEIYTIID 601
H +S EI+ ++D
Sbjct: 576 HPKSAEIFNVVD 587
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 128/512 (25%), Positives = 219/512 (42%), Gaps = 75/512 (14%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y K G +D A KVF MP +D + N ++T + +G V++A + M + S
Sbjct: 130 YAKNGDMDCAVKVFDEMPVKDPIPMNCLITGYSKSGDVVKARRLFDGMVRRTS-----AS 184
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W+++I + G +EA+ + RM +EG PNA T++++ CA+ L GK I
Sbjct: 185 WNSMIACYAHGGEYQEALRLFRRMLSEGARPNAITIATMFSICAKTGDLETGKWARSLIA 244
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
+ N V L+++Y +C + A + F + ++ V+ +T+I GY +NG E+ E
Sbjct: 245 EQD-LQNMIVHTALMEMYVKCRAIDEARREFDRMQQRDVVAWSTMIAGYAQNGRPHESLE 303
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
LF++M+ + P T VL AC
Sbjct: 304 LFERMKATSCK------------------------------------PNEVTLVGVLSAC 327
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK 301
A + S G +I + + L +++G AL++MY + + A+ F+ +E+ +
Sbjct: 328 AQLGSDELGGQIGSHVESQNLPLTSYLGSALIDMYTKCGHVGRARSVFNRMEHKVVITWN 387
Query: 302 MKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG-------KQV 354
G N + +A+ L+ EM D+ P+ T +L+AC+ +++G K +
Sbjct: 388 SMMRGLALNGFAQDAITLYKEMTEEDVQPNEITFVALLTACTHAGLVDQGMSFFKEMKTI 447
Query: 355 HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS----TPDLVSQNAMLTAYAM 410
H + V +VD+ K G L R AYK I P+ V + +L+A
Sbjct: 448 HHVS------PQVEHCACIVDLLCKSGRL---REAYKFICDMEVEPNAVIWSTLLSACRA 498
Query: 411 HGHGKEGIAHFRRILASGFRPDHISFLSALSAC-VHAGSIKTGSEFFDLMAYYDVKPSLK 469
H + ++L PD+ S LS AG E DLM +V+ L
Sbjct: 499 HADVELAKLAASKLLV--LEPDNSSIYVLLSNIYADAGLWGDVREIRDLMRSKNVQ-KLS 555
Query: 470 HYTCMVDLLSRAGEL-GEAYEFIKKIPMAPDS 500
Y+ + EL GE ++F+ + P S
Sbjct: 556 AYSWI--------ELDGEVHKFLVQDTYHPKS 579
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 102/229 (44%), Gaps = 36/229 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC ++D+A++ F M +RD V+W++++ A NG E+LE ERM + + PN V
Sbjct: 260 MYVKCRAIDEARREFDRMQQRDVVAWSTMIAGYAQNGRPHESLELFERMKATSCK-PNEV 318
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+ V+ Q G DE LG + ++
Sbjct: 319 TLVGVLSACAQLGSDE-----------------------------------LGGQIGSHV 343
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
++ + L+D+Y +CG + A +F++ K ++ N+++ G NG +A
Sbjct: 344 ESQNLPLTSYLGSALIDMYTKCGHVGRARSVFNRMEHKVVITWNSMMRGLALNGFAQDAI 403
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEP 229
L+ +M VQ I++ ++++ L D+ S F+++ + P
Sbjct: 404 TLYKEMTEEDVQPNEITFVALLTACTHAGLVDQGMSFFKEMKTIHHVSP 452
>gi|297841915|ref|XP_002888839.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297334680|gb|EFH65098.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 682
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 187/567 (32%), Positives = 298/567 (52%), Gaps = 18/567 (3%)
Query: 46 LERMSSLDNETPNLV---SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLP 102
L R + NE +++ W+ +I + +N EE + RM ++G+ P+A T SVL
Sbjct: 94 LHREAQSINENSDILHPLPWNVLIASYAKNELFEEVVAAYKRMVSKGIRPDAFTYPSVLK 153
Query: 103 ACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVS 162
AC ++ G+ HG I + + + +V N L+ +Y+R G++ A ++F S ++ VS
Sbjct: 154 ACGETLDVASGRVVHGSIEVSSYKCSLYVCNALISMYKRFGNVGIARRLFDHMSERDAVS 213
Query: 163 CNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLL 222
N +I Y G +EA ELFD+M GV+ +I+WN + GY+ Y A +
Sbjct: 214 WNAVINCYASVGMWSEAFELFDKMRFSGVEVSVITWNIISGGYLHTGNYVGALGLISR-- 271
Query: 223 MRD---GIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRY 279
MR+ ++P + G L AC+ + ++R GKEIH LAI V L+ MY +
Sbjct: 272 MRNFPTSLDPVAMIIG--LKACSLIGAIRLGKEIHGLAIHRSYDGIDNVRNTLITMYSKC 329
Query: 280 QDLVAAQMAFDEIENIENLLGKMKE--DGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGI 337
DL A + F + E EN L G+ + A L EML P+ T+
Sbjct: 330 DDLRNAFIVFQKTE--ENSLCTWNSIISGYAQVNKSEEASYLLREMLLAGFQPNFITLAS 387
Query: 338 ILSACSSLATMERGKQVHAYAIR--CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST 395
IL C+ +A ++ GK+ H Y +R C D + + +LVD+YAK G + A+ +S
Sbjct: 388 ILPLCARIANLQHGKEFHCYILRRKCFKDYTM-LWNSLVDVYAKSGKIVAAKQVSNLMSE 446
Query: 396 PDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEF 455
D V+ +++ Y G G+ +A F ++ SG +PD ++ ++ LSAC H+ + G
Sbjct: 447 IDEVTYTSLIDGYGNQGEGRVALALFDEMIRSGIKPDPVTMVAVLSACSHSKLVHEGQRL 506
Query: 456 F-DLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
F + Y ++P L+H++CMVDL RAG L +A + I ++P P W LL C HG
Sbjct: 507 FMKMQPKYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHRMPYEPSGATWATLLNACHIHG 566
Query: 515 NLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWI 574
N E G+ AA++L+E++P N G YV++AN++A AG WS LA R M+D + K PGC+WI
Sbjct: 567 NTEIGKWAAEKLLEMKPENPGYYVLIANMYATAGSWSKLAEVRTIMRDLGVRKDPGCAWI 626
Query: 575 EDRDEIHKFRASDRSHDRSEEIYTIID 601
F D S+ ++ + Y ++D
Sbjct: 627 NTDSGFSLFSVGDTSNPQACDTYPLLD 653
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 110/422 (26%), Positives = 191/422 (45%), Gaps = 44/422 (10%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY + G++ A+++F M ERD VSWN+V+ A+ G+ EA E ++M E +++
Sbjct: 189 MYKRFGNVGIARRLFDHMSERDAVSWNAVINCYASVGMWSEAFELFDKMRFSGVEV-SVI 247
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQ--AEGLEPNARTLSSVLPACARLQKLSLGKEFHG 118
+W+ + GG+ G A+G++ RM+ L+P A + L AC+ + + LGKE HG
Sbjct: 248 TWNIISGGYLHTGNYVGALGLISRMRNFPTSLDPVAMIIG--LKACSLIGAIRLGKEIHG 305
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
+ V N L+ +Y +C D+ +A +F K + + N+II GY + E
Sbjct: 306 LAIHRSYDGIDNVRNTLITMYSKCDDLRNAFIVFQKTEENSLCTWNSIISGYAQVNKSEE 365
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
A L +M + G +P T S+L
Sbjct: 366 ASYLLREM------------------------------------LLAGFQPNFITLASIL 389
Query: 239 IACADMNSLRKGKEIHALAIALGLQSD-TFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
CA + +L+ GKE H + D T + +LV++Y + +VAA+ + + I+
Sbjct: 390 PLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSNLMSEIDE 449
Query: 298 LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVH-A 356
+ DG+ A+ LF EM+ + PD T+ +LSACS + G+++
Sbjct: 450 VTYTSLIDGYGNQGEGRVALALFDEMIRSGIKPDPVTMVAVLSACSHSKLVHEGQRLFMK 509
Query: 357 YAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNAMLTAYAMHGHGK 415
+ G + + +VD+Y + G L A+ R+ P + +L A +HG+ +
Sbjct: 510 MQPKYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHRMPYEPSGATWATLLNACHIHGNTE 569
Query: 416 EG 417
G
Sbjct: 570 IG 571
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 102/241 (42%), Gaps = 5/241 (2%)
Query: 213 EAFSMFRDLLMRDGIEPTS-----FTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTF 267
+AF F L ++ S + S+L AC D+ + G +IHA ++ G++ +
Sbjct: 21 DAFKTFSLLRLQSSPSAVSGDVVLHSAASLLSACVDVLAFVPGLQIHAHCVSSGVEYHSA 80
Query: 268 VGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLD 327
+ LV Y + AQ + + + L + + N + + M+S
Sbjct: 81 LVPKLVTFYSAFNLHREAQSINENSDILHPLPWNVLIASYAKNELFEEVVAAYKRMVSKG 140
Query: 328 LTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHAR 387
+ PD +T +L AC + G+ VH Y +++ AL+ MY + G++ AR
Sbjct: 141 IRPDAFTYPSVLKACGETLDVASGRVVHGSIEVSSYKCSLYVCNALISMYKRFGNVGIAR 200
Query: 388 LAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAG 447
+ +S D VS NA++ YA G E F ++ SG I++ +H G
Sbjct: 201 RLFDHMSERDAVSWNAVINCYASVGMWSEAFELFDKMRFSGVEVSVITWNIISGGYLHTG 260
Query: 448 S 448
+
Sbjct: 261 N 261
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 99/224 (44%), Gaps = 2/224 (0%)
Query: 292 IENIENLLGKMKEDGFEPNVY-TWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMER 350
IE++ LG + G + + T++ ++L S ++ +++ +LSAC +
Sbjct: 3 IESLFKSLGHLASHGHLHDAFKTFSLLRLQSSPSAVSGDVVLHSAASLLSACVDVLAFVP 62
Query: 351 GKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAM 410
G Q+HA+ + G + + LV Y+ + A+ + + N ++ +YA
Sbjct: 63 GLQIHAHCVSSGVEYHSALVPKLVTFYSAFNLHREAQSINENSDILHPLPWNVLIASYAK 122
Query: 411 HGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKH 470
+ +E +A ++R+++ G RPD ++ S L AC + +G + K SL
Sbjct: 123 NELFEEVVAAYKRMVSKGIRPDAFTYPSVLKACGETLDVASGRVVHGSIEVSSYKCSLYV 182
Query: 471 YTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
++ + R G +G A + D+V W A++ S G
Sbjct: 183 CNALISMYKRFGNVGIARRLFDHMS-ERDAVSWNAVINCYASVG 225
>gi|225468012|ref|XP_002270478.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 602
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 179/523 (34%), Positives = 280/523 (53%), Gaps = 39/523 (7%)
Query: 77 EAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLV 136
EA+ +RM G +P L + L +CA+L LG + H I + GF N F+ + LV
Sbjct: 84 EALESFWRMNTSGTKPTKFILCTALNSCAKLLNWGLGVQIHARIIQTGFEDNLFLNSALV 143
Query: 137 DVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGII 196
D+Y +C + +A+ +FD ME + +
Sbjct: 144 DLYAKCD-------------------------------AIVDAKRVFDGME----KHDQV 168
Query: 197 SWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSL-RKGKEIHA 255
SW S+ISG+ N EA F+++L I+P T+ SV+ AC + ++ + +HA
Sbjct: 169 SWTSIISGFSKNGRGKEAILFFKEMLGSQ-IKPNCVTYVSVISACTGLETIFDQCALLHA 227
Query: 256 LAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWN 315
+ LG TFV L++ Y + + A + F +N+L G+ N++
Sbjct: 228 HVVKLGFGVKTFVVSCLIDCYSKCGRIDQAVLLFGTTIERDNILFNSMISGYSQNLFGEE 287
Query: 316 AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVD 375
A++LF EM + L P +T+ IL+AC SL +++G+QVH+ + G +S+V + +AL+D
Sbjct: 288 ALKLFVEMRNNGLNPTDHTLTSILNACGSLTILQQGRQVHSLVAKMGSESNVFVVSALLD 347
Query: 376 MYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILAS-GFRPDHI 434
MY+KCGS+ AR + + + V +M+T YA G G EG+ F R++ GF PDHI
Sbjct: 348 MYSKCGSIDEARCVFDQAVEKNTVLWTSMITGYAQSGRGPEGLGLFERLVTEEGFTPDHI 407
Query: 435 SFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKK 493
F + L+AC HAG + G ++F+ M Y + P L Y C+VDL R G L +A E ++
Sbjct: 408 CFTAVLTACNHAGFLDKGIDYFNQMRRDYGLVPDLDQYACLVDLYVRNGHLRKAKELMEA 467
Query: 494 IPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDL 553
IP P+SVMWG+ L C +G E G+ AAD+L ++EP +T YV +A+++A AG WS++
Sbjct: 468 IPCEPNSVMWGSFLSSCKLYGEAELGREAADKLFKMEPCSTAPYVAMASIYAQAGLWSEV 527
Query: 554 ARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEI 596
R+ MK + + KS G SW+E +H F +D SH RS +I
Sbjct: 528 VEIRKLMKQKGLRKSAGWSWVEVDKRVHVFLVADASHPRSRDI 570
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 103/421 (24%), Positives = 183/421 (43%), Gaps = 76/421 (18%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KC ++ DAK+VF M + D V
Sbjct: 145 LYAKCDAIVDAKRVFDGMEKHD------------------------------------QV 168
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKL-SLGKEFHGY 119
SW+++I GF++NG +EAI M ++PN T SV+ AC L+ + H +
Sbjct: 169 SWTSIISGFSKNGRGKEAILFFKEMLGSQIKPNCVTYVSVISACTGLETIFDQCALLHAH 228
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ + GF FVV+ L+D Y +CG + A+ +F ++ + N++I GY +N EA
Sbjct: 229 VVKLGFGVKTFVVSCLIDCYSKCGRIDQAVLLFGTTIERDNILFNSMISGYSQNLFGEEA 288
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
+LF +M + +G+ PT T S+L
Sbjct: 289 LKLFVEMRN------------------------------------NGLNPTDHTLTSILN 312
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
AC + L++G+++H+L +G +S+ FV AL++MY + + A+ FD+ +L
Sbjct: 313 ACGSLTILQQGRQVHSLVAKMGSESNVFVVSALLDMYSKCGSIDEARCVFDQAVEKNTVL 372
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLD-LTPDIYTVGIILSACSSLATMERGKQVHAYA 358
G+ + + LF +++ + TPD +L+AC+ +++G
Sbjct: 373 WTSMITGYAQSGRGPEGLGLFERLVTEEGFTPDHICFTAVLTACNHAGFLDKGIDYFNQM 432
Query: 359 IR-CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST-PDLVSQNAMLTAYAMHGHGKE 416
R G D+ LVD+Y + G L+ A+ + I P+ V + L++ ++G +
Sbjct: 433 RRDYGLVPDLDQYACLVDLYVRNGHLRKAKELMEAIPCEPNSVMWGSFLSSCKLYGEAEL 492
Query: 417 G 417
G
Sbjct: 493 G 493
>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
Length = 891
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 192/601 (31%), Positives = 313/601 (52%), Gaps = 51/601 (8%)
Query: 5 CGSLDDAKKV----FKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETP--N 58
CG+L D +++ FK+ WN V A + + R SL ++ P +
Sbjct: 228 CGTLVDGRRIHCWAFKL-----GFQWNVFVAASLIHMYSRFGFTGIAR--SLFDDMPFRD 280
Query: 59 LVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHG 118
+ SW+A+I G QNG +A+ +L M+ EG++ N T+ S+LP C +L +S H
Sbjct: 281 MGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHL 340
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
Y+ ++G + FV N L+++Y +KF GN+ +
Sbjct: 341 YVIKHGLEFDLFVSNALINMY-------------AKF------------------GNLED 369
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
AR+ F QM ++SWNS+I+ Y N A F + + +G +P T S+
Sbjct: 370 ARKAFQQM----FITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQL-NGFQPDLLTLVSLA 424
Query: 239 IACADMNSLRKGKEIHALAIALG-LQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
A + + +H + G L D +G A+V+MY + L +A F+ I +
Sbjct: 425 SIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIILVKDV 484
Query: 298 LLGKMKEDGFEPNVYTWNAMQLFSEMLSL-DLTPDIYTVGIILSACSSLATMERGKQVHA 356
+ G+ N A++++ M ++ P+ T IL A + + +++G ++H
Sbjct: 485 ISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMRIHG 544
Query: 357 YAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKE 416
I+ DV + T L+D+Y KCG L A + ++ V+ NA+++ + +HGH ++
Sbjct: 545 RVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEK 604
Query: 417 GIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVD 476
+ F +L G +PDH++F+S LSAC H+G ++ G F LM Y +KPSLKHY CMVD
Sbjct: 605 TLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGCMVD 664
Query: 477 LLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGN 536
LL RAG L AY FIK +P+ PD+ +WGALLG C HGN+E G+ A+DRL E++ N G
Sbjct: 665 LLGRAGYLEMAYGFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGY 724
Query: 537 YVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEI 596
YV+L+N++A G+W + + R ++R + K+PG S IE ++ F ++SH + +EI
Sbjct: 725 YVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEI 784
Query: 597 Y 597
Y
Sbjct: 785 Y 785
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 111/402 (27%), Positives = 188/402 (46%), Gaps = 15/402 (3%)
Query: 170 YCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEP 229
Y G+V+ +R FDQ+ Q+ + +WNSMIS YV N + EA F LL+ I P
Sbjct: 161 YANLGDVSLSRCTFDQIP----QKDVYTWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRP 216
Query: 230 TSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAF 289
+TF VL AC +L G+ IH A LG Q + FV +L+ MY R+ A+ F
Sbjct: 217 DFYTFPPVLKACG---TLVDGRRIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLF 273
Query: 290 DEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATME 349
D++ + G N A+ + EM + + TV IL C L +
Sbjct: 274 DDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDIS 333
Query: 350 RGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYA 409
+H Y I+ G + D+ + AL++MYAK G+L+ AR A++++ D+VS N+++ AY
Sbjct: 334 TAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYE 393
Query: 410 MHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFD-LMAYYDVKPSL 468
+ F ++ +GF+PD ++ +S S + K +M + +
Sbjct: 394 QNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDV 453
Query: 469 KHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLI- 527
+VD+ ++ G L A++ + +I + D + W L+ G +G L I +++
Sbjct: 454 VIGNAVVDMYAKLGLLDSAHK-VFEIILVKDVISWNTLITGYAQNG-LASEAIEVYKMME 511
Query: 528 ---ELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMH 566
E+ PN G +V + +A+ G R ++ +H
Sbjct: 512 ECKEIIPNQ-GTWVSILPAYAHVGALQQGMRIHGRVIKTNLH 552
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 111/419 (26%), Positives = 173/419 (41%), Gaps = 73/419 (17%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G+L+DA+K F+ M D VSWNS++ A
Sbjct: 360 MYAKFGNLEDARKAFQQMFITDVVSWNSIIAA---------------------------- 391
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+ QN A G +MQ G +P+ TL S+ A+ + + HG+I
Sbjct: 392 --------YEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFI 443
Query: 121 TRNGFMSNPFVV-NGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
R G++ V+ N +VD+Y + G + SA K+F +K+ +S NT+I GY +NG +EA
Sbjct: 444 MRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIILVKDVISWNTLITGYAQNGLASEA 503
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
E++ ME I P T+ S+L
Sbjct: 504 IEVYKMMEEC-----------------------------------KEIIPNQGTWVSILP 528
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
A A + +L++G IH I L D FV L+++Y + LV A F ++ ++
Sbjct: 529 AYAHVGALQQGMRIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVT 588
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
+ + ++LF EML + PD T +LSACS +E GK
Sbjct: 589 WNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQ 648
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNAMLTAYAMHGHGKEG 417
G + +VD+ + G L+ A K + PD A+L A +HG+ + G
Sbjct: 649 EYGIKPSLKHYGCMVDLLGRAGYLEMAYGFIKDMPLQPDASIWGALLGACRIHGNIELG 707
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 123/279 (44%), Gaps = 41/279 (14%)
Query: 250 GKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEP 309
K +HAL + G F+ LV +Y D+ ++ FD+I +
Sbjct: 135 AKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIP--------------QK 180
Query: 310 NVYTWNAMQ---------------LFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV 354
+VYTWN+M + +L ++ PD YT +L AC +L G+++
Sbjct: 181 DVYTWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRRI 237
Query: 355 HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHG 414
H +A + G+ +V + +L+ MY++ G AR + + D+ S NAM++ +G+
Sbjct: 238 HCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNA 297
Query: 415 KEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKH---- 470
+ + + G + + ++ +S L C G I T L+ Y +K L+
Sbjct: 298 AQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAM----LIHLYVIKHGLEFDLFV 353
Query: 471 YTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
++++ ++ G L +A + +++ D V W +++
Sbjct: 354 SNALINMYAKFGNLEDARKAFQQM-FITDVVSWNSIIAA 391
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 79/174 (45%), Gaps = 21/174 (12%)
Query: 351 GKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAM 410
K +HA + G + I T LV++YA G + +R + +I D+ + N+M++AY
Sbjct: 135 AKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVH 194
Query: 411 HGHGKEGIAHFRR-ILASGFRPDHISFLSALSAC--------VHAGSIKTGSEFFDLMAY 461
+GH E I F + +L S RPD +F L AC +H + K G ++ +A
Sbjct: 195 NGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVDGRRIHCWAFKLGFQWNVFVA- 253
Query: 462 YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
++ + SR G G A +P D W A++ G + +GN
Sbjct: 254 ----------ASLIHMYSRFGFTGIARSLFDDMPFR-DMGSWNAMISGLIQNGN 296
>gi|356554981|ref|XP_003545819.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Glycine max]
Length = 705
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 188/599 (31%), Positives = 306/599 (51%), Gaps = 74/599 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKC + + A +F MPE+D AC
Sbjct: 150 MYGKCNAFEKAIWLFNEMPEKD--------VAC--------------------------- 174
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
W+ VI + Q+G ++A+ M+ G EPN+ T+++ + +CARL L+ G E H +
Sbjct: 175 -WNTVISCYYQSGNFKDALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEEL 233
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+GF+ + F+ + LVD+Y +CG + A+
Sbjct: 234 INSGFLLDSFISSALVDMYGKCGHLEMAI------------------------------- 262
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
E+F+QM ++ +++WNSMISGY +F+ + +G++PT T S+++
Sbjct: 263 EIFEQMP----KKTVVAWNSMISGYGLKGDIISCIQLFKRM-YNEGVKPTLTTLSSLIMV 317
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C+ L +GK +H I +Q D FV +L+++Y + + A+ F I + +
Sbjct: 318 CSRSARLLEGKFVHGYTIRNRIQPDVFVNSSLMDLYFKCGKVELAEKIFKLIPKSKVVSW 377
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
+ G+ + A+ LFSEM + D T +L+ACS LA +E+GK++H I
Sbjct: 378 NVMISGYVAEGKLFEALGLFSEMRKSYVESDAITFTSVLTACSQLAALEKGKEIHNLIIE 437
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
D++ + AL+DMYAKCG++ A +K + DLVS +M+TAY HGH +
Sbjct: 438 KKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMITAYGSHGHAYGALEL 497
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLLS 479
F +L S +PD ++FL+ LSAC HAG + G +F+ M Y + P ++HY+C++DLL
Sbjct: 498 FAEMLQSNVKPDRVAFLAILSACGHAGLVDEGCYYFNQMINVYGIIPRVEHYSCLIDLLG 557
Query: 480 RAGELGEAYEFIKKIPMAPDSV-MWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYV 538
RAG L EAYE +++ P D V + L C H N++ G A LI+ +P+++ Y+
Sbjct: 558 RAGRLHEAYEILQQNPEIRDDVELLSTLFSACRLHRNIDLGAEIARTLIDKDPDDSSTYI 617
Query: 539 MLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
+L+N++A A +W ++ R KMK+ + K+PGCSWIE +I F D SH E ++
Sbjct: 618 LLSNMYASAHKWDEVRVVRSKMKELGLKKNPGCSWIEINQKILPFFVEDNSHLHLELVF 676
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 127/467 (27%), Positives = 216/467 (46%), Gaps = 40/467 (8%)
Query: 52 LDN-ETPNLVS-WSAVIGGFTQNGYDEEAIGMLFRM-QAEGLEPNARTLSSVLPACARLQ 108
DN E P +S W+ ++ G+T+N EA+ + ++ L+P++ T SV AC L
Sbjct: 61 FDNMENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVFKACGGLH 120
Query: 109 KLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIV 168
+ LGK H + + G M + V + LV +Y +C A+ +F++ K+ NT+I
Sbjct: 121 RYVLGKMIHTCLIKTGLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMPEKDVACWNTVIS 180
Query: 169 GYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIE 228
Y ++GN +A +E+ G+ R R G E
Sbjct: 181 CYYQSGNFKDA------LEYFGLMR------------------------------RFGFE 204
Query: 229 PTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMA 288
P S T + + +CA + L +G EIH I G D+F+ ALV+MY + L A
Sbjct: 205 PNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFISSALVDMYGKCGHLEMAIEI 264
Query: 289 FDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATM 348
F+++ + G+ + +QLF M + + P + T+ ++ CS A +
Sbjct: 265 FEQMPKKTVVAWNSMISGYGLKGDIISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARL 324
Query: 349 ERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAY 408
GK VH Y IR DV + ++L+D+Y KCG ++ A +K I +VS N M++ Y
Sbjct: 325 LEGKFVHGYTIRNRIQPDVFVNSSLMDLYFKCGKVELAEKIFKLIPKSKVVSWNVMISGY 384
Query: 409 AMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSL 468
G E + F + S D I+F S L+AC +++ G E +L+ + +
Sbjct: 385 VAEGKLFEALGLFSEMRKSYVESDAITFTSVLTACSQLAALEKGKEIHNLIIEKKLDNNE 444
Query: 469 KHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
++D+ ++ G + EA+ K +P D V W +++ SHG+
Sbjct: 445 VVMGALLDMYAKCGAVDEAFSVFKCLP-KRDLVSWTSMITAYGSHGH 490
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 112/438 (25%), Positives = 185/438 (42%), Gaps = 63/438 (14%)
Query: 93 NARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIF 152
+ R L +L AC + L GK H + G ++ F+ L++ Y C
Sbjct: 2 DTRKLLPLLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKTLINQYLSC---------- 51
Query: 153 SKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYD 212
+ + C +FD ME+ I WN +++GY N +Y
Sbjct: 52 ---HLYDHAKC------------------VFDNMEN---PCEISLWNGLMAGYTKNYMYV 87
Query: 213 EAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGAL 272
EA +F LL ++P S+T+ SV AC ++ GK IH I GL D VG +L
Sbjct: 88 EALELFEKLLHYPYLKPDSYTYPSVFKACGGLHRYVLGKMIHTCLIKTGLMMDIVVGSSL 147
Query: 273 VEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWN--------------AMQ 318
V MY + A F+E+ E +V WN A++
Sbjct: 148 VGMYGKCNAFEKAIWLFNEMP--------------EKDVACWNTVISCYYQSGNFKDALE 193
Query: 319 LFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYA 378
F M P+ T+ +S+C+ L + RG ++H I G+ D I +ALVDMY
Sbjct: 194 YFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFISSALVDMYG 253
Query: 379 KCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLS 438
KCG L+ A ++++ +V+ N+M++ Y + G I F+R+ G +P + S
Sbjct: 254 KCGHLEMAIEIFEQMPKKTVVAWNSMISGYGLKGDIISCIQLFKRMYNEGVKPTLTTLSS 313
Query: 439 ALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAP 498
+ C + + G ++P + + ++DL + G++ A + K IP +
Sbjct: 314 LIMVCSRSARLLEGKFVHGYTIRNRIQPDVFVNSSLMDLYFKCGKVELAEKIFKLIPKS- 372
Query: 499 DSVMWGALLGGCVSHGNL 516
V W ++ G V+ G L
Sbjct: 373 KVVSWNVMISGYVAEGKL 390
>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 895
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 178/616 (28%), Positives = 317/616 (51%), Gaps = 103/616 (16%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K L +A++VF M +D V+WN+++
Sbjct: 266 MYFKFERLREARRVFSKMAVKDSVTWNTMIC----------------------------- 296
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
G+ Q G E ++ + M +G P+ +++S + AC + L +GK H Y+
Sbjct: 297 -------GYAQLGRHEASVKLFMDM-IDGFVPDMLSITSTIRACGQSGDLQVGKFVHKYL 348
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+GF + N L+D+Y +CGD+L+A ++F K+ V+ N++I GY ++G E
Sbjct: 349 IGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGL 408
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
E F M+ ++R +P S TF +L
Sbjct: 409 ESFKMMK---MER----------------------------------KPDSVTFVLLLSI 431
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
+ + + +G+ IH I G +++ +G +L+++Y + E++++ +
Sbjct: 432 FSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKC----------GEMDDLLKVFS 481
Query: 301 KMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSSLA 346
M ++ +WN + Q+ +EM + L PD TV IL CS LA
Sbjct: 482 YMSAH----DIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLA 537
Query: 347 TMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLT 406
+GK++H Y + G++S+V IG AL++MY+KCGSL++ +K + D+V+ A+++
Sbjct: 538 VRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALIS 597
Query: 407 AYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVK 465
A+ M+G GK+ + F+ + SG PD ++F++ + AC H+G +K G FFD M Y+++
Sbjct: 598 AFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFDRMKTDYNLE 657
Query: 466 PSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADR 525
P ++HY C+VDLL+R+G L +A EFI +PM PD+ +WGALL C + GN Q + +
Sbjct: 658 PRMEHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACRARGNTNIAQRVSKK 717
Query: 526 LIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRA 585
++EL ++TG YV+++N++A G+W + R MK + + K PG SWIE + ++ FR
Sbjct: 718 ILELNSDDTGYYVLVSNIYATLGKWDQVKTVRNSMKTKGLKKEPGSSWIEIQKRVYVFRT 777
Query: 586 SDRSHDRSEEIYTIID 601
D+S ++ +++ +++
Sbjct: 778 GDKSFEQYDKVKDLLE 793
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 125/507 (24%), Positives = 222/507 (43%), Gaps = 75/507 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY + LD+A+ VF+ M RD VSWNS+++ +NG
Sbjct: 165 MYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGF---------------------- 202
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
W E+A+ M + + G+ P+ T+SSVL AC L + G HG I
Sbjct: 203 -W-------------EDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVI 248
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G + + NGL+ +Y + + A ++FSK ++K+ V+ NT+I GY + G
Sbjct: 249 EKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGR----- 303
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
++ + +F D++ DG P + S + A
Sbjct: 304 ------------------------------HEASVKLFMDMI--DGFVPDMLSITSTIRA 331
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C L+ GK +H I G + DT L++MY + DL+AAQ FD + +++
Sbjct: 332 CGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTW 391
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
+G+ + Y ++ F +M+ ++ PD T ++LS S LA + +G+ +H I+
Sbjct: 392 NSLINGYTQSGYYKEGLESF-KMMKMERKPDSVTFVLLLSIFSQLADINQGRGIHCDVIK 450
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
G+++++ IG +L+D+YAKCG + + +S D++S N ++ + G
Sbjct: 451 FGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQM 510
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSR 480
+ G PD + L L C + G E + + ++ ++++ S+
Sbjct: 511 INEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSK 570
Query: 481 AGELGEAYEFIKKIPMAPDSVMWGALL 507
G L + K + D V W AL+
Sbjct: 571 CGSLENCIKVFKYMK-EKDVVTWTALI 596
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 122/501 (24%), Positives = 219/501 (43%), Gaps = 75/501 (14%)
Query: 19 PERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEA 78
P + WNS++ A NGL FTQ A
Sbjct: 82 PTNNVYLWNSIIRALTHNGL------------------------------FTQ------A 105
Query: 79 IGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDV 138
+G M+ + L+P+A T SV+ +CAR+ L LG H + GF S+ ++ N L+D+
Sbjct: 106 LGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYIGNALIDM 165
Query: 139 YRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISW 198
Y R D+ +A +F + S ++ VS N++I GYC NG
Sbjct: 166 YSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNG------------------------ 201
Query: 199 NSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAI 258
+++A M+ M G+ P FT SVL+AC + ++++G +H +
Sbjct: 202 -----------FWEDALDMYHKFRMT-GMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIE 249
Query: 259 ALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQ 318
+G+ D +G L+ MY +++ L A+ F ++ +++ G+ +++
Sbjct: 250 KIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVK 309
Query: 319 LFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYA 378
LF +M+ PD+ ++ + AC ++ GK VH Y I G++ D L+DMYA
Sbjct: 310 LFMDMID-GFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYA 368
Query: 379 KCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLS 438
KCG L A+ + D V+ N+++ Y G+ KEG+ F +++ +PD ++F+
Sbjct: 369 KCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESF-KMMKMERKPDSVTFVL 427
Query: 439 ALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAP 498
LS I G + + + L ++D+ ++ GE+ + + + A
Sbjct: 428 LLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMS-AH 486
Query: 499 DSVMWGALLGGCVSHGNLEFG 519
D + W ++ V + G
Sbjct: 487 DIISWNTVIASSVHFDDCTVG 507
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 112/457 (24%), Positives = 209/457 (45%), Gaps = 40/457 (8%)
Query: 91 EPNARTL-SSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSAL 149
EP+ L SS+L + + + H I +G + L+ Y + D +S++
Sbjct: 15 EPSQEFLRSSLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSV 74
Query: 150 KIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNS 209
+F S N V WNS+I N
Sbjct: 75 SVFRSISPTNNVYL----------------------------------WNSIIRALTHNG 100
Query: 210 LYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVG 269
L+ +A + ++ + ++P +FTF SV+ +CA + L G +H A+ +G +SD ++G
Sbjct: 101 LFTQALGYYTEMREKK-LQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYIG 159
Query: 270 GALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLT 329
AL++MY R+ DL A+ F+E+ N +++ G+ N + +A+ ++ + +
Sbjct: 160 NALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMV 219
Query: 330 PDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLA 389
PD +T+ +L AC SL ++ G VH + G DV IG L+ MY K L+ AR
Sbjct: 220 PDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRV 279
Query: 390 YKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSI 449
+ +++ D V+ N M+ YA G + + F ++ GF PD +S S + AC +G +
Sbjct: 280 FSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMI-DGFVPDMLSITSTIRACGQSGDL 338
Query: 450 KTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
+ G + + ++D+ ++ G+L A E DSV W +L+ G
Sbjct: 339 QVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTK-CKDSVTWNSLING 397
Query: 510 CVSHGNLEFGQIAADRLIELEPN-NTGNYVMLANLFA 545
G + G + + +++++E ++ +V+L ++F+
Sbjct: 398 YTQSGYYKEG-LESFKMMKMERKPDSVTFVLLLSIFS 433
>gi|147804706|emb|CAN64870.1| hypothetical protein VITISV_041329 [Vitis vinifera]
Length = 629
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 173/562 (30%), Positives = 288/562 (51%), Gaps = 74/562 (13%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
N+ +++A+I GF NG+ EE +M+ EG+ P+ T + AC + ++ K+ H
Sbjct: 103 NVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKFTFPCAIKACLDVLEI---KKIH 159
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
G + + G + F+ + LV+ Y + G M A F + I
Sbjct: 160 GLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPI-------------------- 199
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
R ++ WN+M++GY ++ FR + + + P+ FT
Sbjct: 200 ---------------RDVVLWNAMVNGYAQIGQFEMVLETFRRM-NDESVVPSRFTVTGX 243
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
L A M L G+ IH A+ +G S V +L++MY + + IE+
Sbjct: 244 LSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKC----------IEDALE 293
Query: 298 LLGKMKEDGFEPNVYTWNA--------------MQLFSEMLSLDLTPDIYTVGIILSACS 343
+ M+E ++++WN+ ++L ML + PD+ TV +L ACS
Sbjct: 294 IFEMMREK----DIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACS 349
Query: 344 SLATMERGKQVHAYAIRCGYDSD------VHIGTALVDMYAKCGSLKHARLAYKRISTPD 397
LA + G+++H Y I G D V + A++DMYAKCGS++ A L ++R+S D
Sbjct: 350 HLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKD 409
Query: 398 LVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFF- 456
+ S N M+ Y MHG+G E + F R+ +PD ++F+ LSAC HAG + G F
Sbjct: 410 VASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLV 469
Query: 457 DLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNL 516
+ + YDV P+++HYTC++D+L RAG+L EAYE +P+ + V+W ALL C H +
Sbjct: 470 QMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALLAACRLHKHA 529
Query: 517 EFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIED 576
++AA R+ ELEP + G+YV+++N++ GR+ ++ R M+ + + K+PGCSWIE
Sbjct: 530 VLAEVAAQRVFELEPEHCGSYVLMSNVYGAVGRYEEVLEVRHTMRQQNVRKTPGCSWIEL 589
Query: 577 RDEIHKFRASDRSHDRSEEIYT 598
++ +H F ++DR+H + IY
Sbjct: 590 KNGVHVFVSADRAHPEAXSIYA 611
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 112/442 (25%), Positives = 186/442 (42%), Gaps = 57/442 (12%)
Query: 5 CGSLDDAKKV----FKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
C + + KK+ FK E D +++V GL+ A E + D +V
Sbjct: 149 CLDVLEIKKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRD-----VV 203
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
W+A++ G+ Q G E + RM E + P+ T++ L A + L+ G+ HG+
Sbjct: 204 LWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGXLSVFAVMGDLNNGRIIHGFA 263
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G+ S V N L+D+Y +C + AL+IF K+ S N+I+ + + G+
Sbjct: 264 MKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTL 323
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
L D+M LG GI+P T +VL A
Sbjct: 324 RLLDRM--LGA----------------------------------GIQPDLVTVTTVLPA 347
Query: 241 CADMNSLRKGKEIHALAIALGLQS------DTFVGGALVEMYCRYQDLVAAQMAFDEIEN 294
C+ + +L G+EIH I GL D + A+++MY + + A + F+ + N
Sbjct: 348 CSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSN 407
Query: 295 IENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV 354
+ + G+ + Y A+++FS M + L PD T +LSACS + +G+
Sbjct: 408 KDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNF 467
Query: 355 HAYAIRCGYDSDVHIG--TALVDMYAKCGSLKHA-RLAYKRISTPDLVSQNAMLTAYAMH 411
++ YD I T ++DM + G L A LA + V A+L A +H
Sbjct: 468 -LVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALLAACRLH 526
Query: 412 GHGKEGIAHFRRILASGFRPDH 433
H +R+ P+H
Sbjct: 527 KHAVLAEVAAQRVFE--LEPEH 546
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 139/302 (46%), Gaps = 45/302 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKC ++DA ++F+MM E+D +
Sbjct: 281 MYGKCKCIEDALEIFEMMREKD------------------------------------IF 304
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW++++ Q G + + +L RM G++P+ T+++VLPAC+ L L G+E HGY+
Sbjct: 305 SWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYM 364
Query: 121 TRNGF------MSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
+G + + + N ++D+Y +CG M A +F + S K+ S N +I+GY +G
Sbjct: 365 IVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMGYGMHG 424
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTF 234
EA E+F +M + ++ +++ ++S + + + + + PT +
Sbjct: 425 YGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQMKSKYDVAPTIEHY 484
Query: 235 GSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIEN 294
V+ L E + LA+ + ++++ V AL+ ++ V A++A +
Sbjct: 485 TCVIDMLGRAGQL---DEAYELALTMPIEANPVVWRALLAACRLHKHAVLAEVAAQRVFE 541
Query: 295 IE 296
+E
Sbjct: 542 LE 543
>gi|356524187|ref|XP_003530713.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Glycine max]
Length = 705
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 187/599 (31%), Positives = 306/599 (51%), Gaps = 74/599 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC + + A +F MPE+D AC
Sbjct: 150 MYAKCNAFEKAIWLFNEMPEKD--------VAC--------------------------- 174
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
W+ VI + Q+G +EA+ M+ G EPN+ T+++ + +CARL L+ G E H +
Sbjct: 175 -WNTVISCYYQSGNFKEALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEEL 233
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+GF+ + F+ + LVD+Y +CG + A+
Sbjct: 234 INSGFLLDSFISSALVDMYGKCGHLEMAI------------------------------- 262
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
E+F+QM ++ +++WNSMISGY +F+ + +G++PT T S+++
Sbjct: 263 EVFEQMP----KKTVVAWNSMISGYGLKGDSISCIQLFKRM-YNEGVKPTLTTLSSLIMV 317
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C+ L +GK +H I +QSD F+ +L+++Y + + A+ F I + +
Sbjct: 318 CSRSARLLEGKFVHGYTIRNRIQSDVFINSSLMDLYFKCGKVELAENIFKLIPKSKVVSW 377
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
+ G+ + A+ LFSEM + PD T +L+ACS LA +E+G+++H I
Sbjct: 378 NVMISGYVAEGKLFEALGLFSEMRKSYVEPDAITFTSVLTACSQLAALEKGEEIHNLIIE 437
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
D++ + AL+DMYAKCG++ A +K + DLVS +M+TAY HG +
Sbjct: 438 KKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMITAYGSHGQAYVALEL 497
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLLS 479
F +L S +PD ++FL+ LSAC HAG + G +F+ M Y + P ++HY+C++DLL
Sbjct: 498 FAEMLQSNMKPDRVTFLAILSACGHAGLVDEGCYYFNQMVNVYGIIPRVEHYSCLIDLLG 557
Query: 480 RAGELGEAYEFIKKIPMAPDSV-MWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYV 538
RAG L EAYE +++ P D V + L C H N++ G A LI+ +P+++ Y+
Sbjct: 558 RAGRLHEAYEILQQNPEIRDDVELLSTLFSACRLHRNIDLGAEIARTLIDKDPDDSSTYI 617
Query: 539 MLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
+L+N++A A +W ++ R KMK+ + K+PGCSWIE +I F D SH E ++
Sbjct: 618 LLSNMYASAHKWDEVRVVRSKMKELGLKKNPGCSWIEINQKILPFFVEDNSHLHLELVF 676
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 133/467 (28%), Positives = 219/467 (46%), Gaps = 40/467 (8%)
Query: 52 LDN-ETPNLVS-WSAVIGGFTQNGYDEEAIGMLFRM-QAEGLEPNARTLSSVLPACARLQ 108
DN E P +S W+ ++ G+T+N EA+ + ++ L+P++ T SVL AC L
Sbjct: 61 FDNMENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKACGGLY 120
Query: 109 KLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIV 168
K LGK H + + G M + V + LV +Y +C A+ +F++ K+ NT+I
Sbjct: 121 KYVLGKMIHTCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMPEKDVACWNTVIS 180
Query: 169 GYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIE 228
Y ++GN EA +E+ G+ R R G E
Sbjct: 181 CYYQSGNFKEA------LEYFGLMR------------------------------RFGFE 204
Query: 229 PTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMA 288
P S T + + +CA + L +G EIH I G D+F+ ALV+MY + L A
Sbjct: 205 PNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFISSALVDMYGKCGHLEMAIEV 264
Query: 289 FDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATM 348
F+++ + G+ + + +QLF M + + P + T+ ++ CS A +
Sbjct: 265 FEQMPKKTVVAWNSMISGYGLKGDSISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARL 324
Query: 349 ERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAY 408
GK VH Y IR SDV I ++L+D+Y KCG ++ A +K I +VS N M++ Y
Sbjct: 325 LEGKFVHGYTIRNRIQSDVFINSSLMDLYFKCGKVELAENIFKLIPKSKVVSWNVMISGY 384
Query: 409 AMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSL 468
G E + F + S PD I+F S L+AC +++ G E +L+ + +
Sbjct: 385 VAEGKLFEALGLFSEMRKSYVEPDAITFTSVLTACSQLAALEKGEEIHNLIIEKKLDNNE 444
Query: 469 KHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
++D+ ++ G + EA+ K +P D V W +++ SHG
Sbjct: 445 VVMGALLDMYAKCGAVDEAFSVFKCLP-KRDLVSWTSMITAYGSHGQ 490
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 115/456 (25%), Positives = 191/456 (41%), Gaps = 65/456 (14%)
Query: 93 NARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIF 152
+ R L +L AC + L GK H + G ++ F+ L+++Y C
Sbjct: 2 DTRKLLPLLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKNLINLYLSC---------- 51
Query: 153 SKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYD 212
+ + C +FD ME+ I WN +++GY N +Y
Sbjct: 52 ---HLYDHAKC------------------VFDNMEN---PCEISLWNGLMAGYTKNYMYV 87
Query: 213 EAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGAL 272
EA +F LL ++P S+T+ SVL AC + GK IH + GL D VG +L
Sbjct: 88 EALELFEKLLHYPYLKPDSYTYPSVLKACGGLYKYVLGKMIHTCLVKTGLMMDIVVGSSL 147
Query: 273 VEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWN--------------AMQ 318
V MY + A F+E+ E +V WN A++
Sbjct: 148 VGMYAKCNAFEKAIWLFNEMP--------------EKDVACWNTVISCYYQSGNFKEALE 193
Query: 319 LFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYA 378
F M P+ T+ +S+C+ L + RG ++H I G+ D I +ALVDMY
Sbjct: 194 YFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFISSALVDMYG 253
Query: 379 KCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLS 438
KCG L+ A ++++ +V+ N+M++ Y + G I F+R+ G +P + S
Sbjct: 254 KCGHLEMAIEVFEQMPKKTVVAWNSMISGYGLKGDSISCIQLFKRMYNEGVKPTLTTLSS 313
Query: 439 ALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAP 498
+ C + + G ++ + + ++DL + G++ A K IP +
Sbjct: 314 LIMVCSRSARLLEGKFVHGYTIRNRIQSDVFINSSLMDLYFKCGKVELAENIFKLIPKS- 372
Query: 499 DSVMWGALLGGCVSHGNL--EFGQIAADRLIELEPN 532
V W ++ G V+ G L G + R +EP+
Sbjct: 373 KVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVEPD 408
>gi|224121686|ref|XP_002318647.1| predicted protein [Populus trichocarpa]
gi|222859320|gb|EEE96867.1| predicted protein [Populus trichocarpa]
Length = 744
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 184/602 (30%), Positives = 306/602 (50%), Gaps = 68/602 (11%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG + +A+ VF+ + + + V N V
Sbjct: 186 MYMKCGDIKNAENVFERIRDNELVGRNMAV------------------------------ 215
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
W+ +I G+ N A+ + M G+ P++ T+ VL C++L L++GK+ HG I
Sbjct: 216 -WNVMILGYVSNECLSLALELFVEMLELGISPDSSTVVVVLVLCSQLLDLAVGKQIHGLI 274
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
G + V L+++Y +CGD ++L+IF + +N N
Sbjct: 275 LGLGLDDDVRVGTALMEMYFKCGDPETSLQIFKR----------------SQNHN----- 313
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
++ W S++ N +EA F + ++ G P + L A
Sbjct: 314 --------------LVMWGSVMLNCAQNGYPNEALEFFSEFMLDCGF-PDPVILLAALRA 358
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C+ ++ +G IH AI +G SD FVGGALV+ Y + D+ AQ F + + +
Sbjct: 359 CSFLSLKPRGMAIHGFAIKMGFDSDVFVGGALVDFYGKCGDMEYAQQVFYGLSTRDLVSW 418
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
GF N A++ F +M S + P+ T+ ILS C+ L+ M K+VH Y +R
Sbjct: 419 NALISGFAQNKCADEALKAFRDMQSKQIKPNTVTMACILSVCTHLSVMILCKEVHCYLLR 478
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
++++ + +L+ YAKCG + +R ++++ + V+ N++L + MHG E A
Sbjct: 479 HWFETNALVNNSLISAYAKCGDIHSSRTVFEKLPVRNEVTWNSILLGFGMHGRTDEMFAT 538
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFD-LMAYYDVKPSLKHYTCMVDLLS 479
F ++ + +PDH +F S LS+C H+G + G ++F+ +M Y+++P ++ YTCMVDLL
Sbjct: 539 FEKMKEANIKPDHGTFTSLLSSCSHSGKVDAGWKYFNSMMEDYNLEPRVEQYTCMVDLLG 598
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
RAG L +AY+ I +P +PD +WG+LL C +HGN + ++ A+ + EL+ ++ G V+
Sbjct: 599 RAGNLNQAYDLIMSMPCSPDDRIWGSLLASCKNHGNTKLAEVVANHIFELDASSVGYRVL 658
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTI 599
LANL+ +G +++ R R +K + K PGCSWIE + IH F A D SHDRS +IY
Sbjct: 659 LANLYEDSGNLNEVFRVRTDIKQMGLKKQPGCSWIEVDNSIHIFVAGDYSHDRSGDIYAT 718
Query: 600 ID 601
I+
Sbjct: 719 IE 720
Score = 201 bits (511), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 149/558 (26%), Positives = 255/558 (45%), Gaps = 83/558 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG+ +A +F+ M ERD VSWN++++
Sbjct: 83 MYWKCGAGGNAVDMFERMEERDSVSWNTMIS----------------------------- 113
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE--GLEPNARTLSSVLPACARLQKLSLGKEFHG 118
GF Q+G +++ M RM E G N + L +CA ++ L+ G E HG
Sbjct: 114 -------GFCQSGDYVKSLVMFRRMVKECGGSYHNRVACLAALSSCASIKCLTHGLEIHG 166
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSI-----KNEVSCNTIIVGYCEN 173
++ + G S+ F+V+ L+++Y +CGD+ +A +F + +N N +I+GY N
Sbjct: 167 FLVKKGVDSDEFLVSALIEMYMKCGDIKNAENVFERIRDNELVGRNMAVWNVMILGYVSN 226
Query: 174 GNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFT 233
++ A ELF +M L GI P S T
Sbjct: 227 ECLSLALELFVEMLEL------------------------------------GISPDSST 250
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
VL+ C+ + L GK+IH L + LGL D VG AL+EMY + D + F +
Sbjct: 251 VVVVLVLCSQLLDLAVGKQIHGLILGLGLDDDVRVGTALMEMYFKCGDPETSLQIFKRSQ 310
Query: 294 NIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ 353
N ++ N Y A++ FSE + PD + L ACS L+ RG
Sbjct: 311 NHNLVMWGSVMLNCAQNGYPNEALEFFSEFMLDCGFPDPVILLAALRACSFLSLKPRGMA 370
Query: 354 VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGH 413
+H +AI+ G+DSDV +G ALVD Y KCG +++A+ + +ST DLVS NA+++ +A +
Sbjct: 371 IHGFAIKMGFDSDVFVGGALVDFYGKCGDMEYAQQVFYGLSTRDLVSWNALISGFAQNKC 430
Query: 414 GKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTC 473
E + FR + + +P+ ++ LS C H + E + + + +
Sbjct: 431 ADEALKAFRDMQSKQIKPNTVTMACILSVCTHLSVMILCKEVHCYLLRHWFETNALVNNS 490
Query: 474 MVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE--FGQIAADRLIELEP 531
++ ++ G++ + +K+P+ + V W ++L G HG + F + ++P
Sbjct: 491 LISAYAKCGDIHSSRTVFEKLPVR-NEVTWNSILLGFGMHGRTDEMFATFEKMKEANIKP 549
Query: 532 NNTGNYVMLANLFAYAGR 549
++ G + L + +++G+
Sbjct: 550 DH-GTFTSLLSSCSHSGK 566
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 131/467 (28%), Positives = 212/467 (45%), Gaps = 83/467 (17%)
Query: 70 TQNGYDEEAIGMLFRMQAEGLEPNA-RTLSSVLPACARLQKLSLGKEFHGYITRNGFMSN 128
T++G+ E+AI + G R ++ A L ++ GK+ HG++ + GF+ +
Sbjct: 14 TEDGFFEDAIRVYLDFIECGFPVEEFRFFPCLIKAFGGLYDVNKGKQIHGHLLKFGFLQD 73
Query: 129 PFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEH 188
FV N L+ +Y +CG GN A ++F++ME
Sbjct: 74 IFVKNSLLGMYWKCG----------------------------AGGN---AVDMFERME- 101
Query: 189 LGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMR-DGIEPTSFTFGSVLIACADMNSL 247
+R +SWN+MISG+ + Y ++ MFR ++ G + L +CA + L
Sbjct: 102 ---ERDSVSWNTMISGFCQSGDYVKSLVMFRRMVKECGGSYHNRVACLAALSSCASIKCL 158
Query: 248 RKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGF 307
G EIH + G+ SD F+ AL+EMY + D+ A+ F+ I + E L+G+
Sbjct: 159 THGLEIHGFLVKKGVDSDEFLVSALIEMYMKCGDIKNAENVFERIRDNE-LVGR------ 211
Query: 308 EPNVYTWN--------------AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ 353
N+ WN A++LF EML L ++PD TV ++L CS L + GKQ
Sbjct: 212 --NMAVWNVMILGYVSNECLSLALELFVEMLELGISPDSSTVVVVLVLCSQLLDLAVGKQ 269
Query: 354 VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGH 413
+H + G D DV +GTAL++MY KCG + + +KR +LV +++ A +G+
Sbjct: 270 IHGLILGLGLDDDVRVGTALMEMYFKCGDPETSLQIFKRSQNHNLVMWGSVMLNCAQNGY 329
Query: 414 GKEGIAHFRRILASGFRPDHISFLSALSAC-----------VHAGSIKTGSEFFDLMAYY 462
E + F + PD + L+AL AC +H +IK G FD +
Sbjct: 330 PNEALEFFSEFMLDCGFPDPVILLAALRACSFLSLKPRGMAIHGFAIKMG---FDSDVFV 386
Query: 463 DVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
+VD + G++ A + + D V W AL+ G
Sbjct: 387 G--------GALVDFYGKCGDMEYAQQVFYGLS-TRDLVSWNALISG 424
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 146/324 (45%), Gaps = 10/324 (3%)
Query: 199 NSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI-ACADMNSLRKGKEIHALA 257
N MI ++ +++A ++ D + G F F LI A + + KGK+IH
Sbjct: 7 NRMIKECTEDGFFEDAIRVYLDFI-ECGFPVEEFRFFPCLIKAFGGLYDVNKGKQIHGHL 65
Query: 258 IALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAM 317
+ G D FV +L+ MY + A F+ +E +++ GF + ++
Sbjct: 66 LKFGFLQDIFVKNSLLGMYWKCGAGGNAVDMFERMEERDSVSWNTMISGFCQSGDYVKSL 125
Query: 318 QLFSEMLSLDLTPDIYTVGII--LSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVD 375
+F M+ V + LS+C+S+ + G ++H + ++ G DSD + +AL++
Sbjct: 126 VMFRRMVKECGGSYHNRVACLAALSSCASIKCLTHGLEIHGFLVKKGVDSDEFLVSALIE 185
Query: 376 MYAKCGSLKHARLAYKRISTPDLVSQ-----NAMLTAYAMHGHGKEGIAHFRRILASGFR 430
MY KCG +K+A ++RI +LV + N M+ Y + + F +L G
Sbjct: 186 MYMKCGDIKNAENVFERIRDNELVGRNMAVWNVMILGYVSNECLSLALELFVEMLELGIS 245
Query: 431 PDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEF 490
PD + + L C + G + L+ + ++ T ++++ + G+ + +
Sbjct: 246 PDSSTVVVVLVLCSQLLDLAVGKQIHGLILGLGLDDDVRVGTALMEMYFKCGDPETSLQI 305
Query: 491 IKKIPMAPDSVMWGALLGGCVSHG 514
K+ + VMWG+++ C +G
Sbjct: 306 FKR-SQNHNLVMWGSVMLNCAQNG 328
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/246 (19%), Positives = 114/246 (46%), Gaps = 12/246 (4%)
Query: 291 EIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTV-GIILSACSSLATME 349
++ + ++ + EDGF + A++++ + + + + ++ A L +
Sbjct: 2 DVSKVNRMIKECTEDGFFED-----AIRVYLDFIECGFPVEEFRFFPCLIKAFGGLYDVN 56
Query: 350 RGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYA 409
+GKQ+H + ++ G+ D+ + +L+ MY KCG+ +A ++R+ D VS N M++ +
Sbjct: 57 KGKQIHGHLLKFGFLQDIFVKNSLLGMYWKCGAGGNAVDMFERMEERDSVSWNTMISGFC 116
Query: 410 MHGHGKEGIAHFRRIL--ASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPS 467
G + + FRR++ G + ++ L+ALS+C + G E + V
Sbjct: 117 QSGDYVKSLVMFRRMVKECGGSYHNRVACLAALSSCASIKCLTHGLEIHGFLVKKGVDSD 176
Query: 468 LKHYTCMVDLLSRAGELGEAYEFIKKIP----MAPDSVMWGALLGGCVSHGNLEFGQIAA 523
+ ++++ + G++ A ++I + + +W ++ G VS+ L
Sbjct: 177 EFLVSALIEMYMKCGDIKNAENVFERIRDNELVGRNMAVWNVMILGYVSNECLSLALELF 236
Query: 524 DRLIEL 529
++EL
Sbjct: 237 VEMLEL 242
>gi|297743264|emb|CBI36131.3| unnamed protein product [Vitis vinifera]
Length = 550
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 158/381 (41%), Positives = 235/381 (61%), Gaps = 15/381 (3%)
Query: 227 IEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQ 286
+ PT + S+L +C +++ GK++HA G DT + LV +YC L +A+
Sbjct: 71 LTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSAR 130
Query: 287 MAFDEIENIENLLGKMKEDGFEPNVYTWN-----AMQLFSEMLSLDLTPDIYTVGIILSA 341
+ FD I L + G Y WN A+QL+ +M L PD +T +L A
Sbjct: 131 LLFDRIPKHNIFLWNVLIRG-----YAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKA 185
Query: 342 CSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPD---L 398
C++L+ +E G+++H + ++ G++ DV +G AL+DMYAKCG + AR + +I D +
Sbjct: 186 CAALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLV 245
Query: 399 VSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDL 458
VS NAM+T YAMHGH E + F + +PDHI+F+ LSAC H G ++ G FF+
Sbjct: 246 VSWNAMITGYAMHGHATEALDLFEEMNRVA-KPDHITFVGVLSACSHGGLLEEGWMFFET 304
Query: 459 MAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
M Y + P+++HYTCMVDLL +G L EAY I ++ + PDS +WGALL C H N+E
Sbjct: 305 MIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSGVWGALLNSCKIHANVE 364
Query: 518 FGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDR 577
G+IA +RLIELEP++ GNYV+L+N++A AG+W +A+ R+ M DRR+ KS CSWIE +
Sbjct: 365 LGEIALERLIELEPDDAGNYVILSNIYAQAGKWEGVAKLRKLMTDRRLKKSIACSWIEVK 424
Query: 578 DEIHKFRASDRSHDRSEEIYT 598
+++H F + D SH S+EIY+
Sbjct: 425 NKVHAFLSGDTSHPLSDEIYS 445
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 106/389 (27%), Positives = 167/389 (42%), Gaps = 47/389 (12%)
Query: 51 SLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEG--LEPNARTLSSVLPACARLQ 108
SL ++PN S+++ F N +AI AE L P +S+L +C +
Sbjct: 31 SLQYQSPN-PSFTSSAPQFDNNQTHLKAIPSCSNPHAESTCLTPTYSNYASLLQSCIARK 89
Query: 109 KLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIV 168
+ GK+ H + GF + + LV++Y C D LS+
Sbjct: 90 AIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVC-DSLSS-------------------- 128
Query: 169 GYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIE 228
AR LFD++ + I WN +I GY N Y+ A ++ + G+
Sbjct: 129 ----------ARLLFDRIP----KHNIFLWNVLIRGYAWNGPYEAAVQLYYQMF-DYGLV 173
Query: 229 PTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMA 288
P +FTF VL ACA ++++ G+EIH + G + D FVG AL++MY + + +A+
Sbjct: 174 PDNFTFPFVLKACAALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREV 233
Query: 289 FDEIENIENLL---GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSL 345
FD+I + +L G+ + + A+ LF EM + PD T +LSACS
Sbjct: 234 FDKILVRDAVLVVSWNAMITGYAMHGHATEALDLFEEMNRV-AKPDHITFVGVLSACSHG 292
Query: 346 ATMERGKQVHAYAIR-CGYDSDVHIGTALVDMYAKCGSLKHA-RLAYKRISTPDLVSQNA 403
+E G IR D V T +VD+ G L A L + PD A
Sbjct: 293 GLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSGVWGA 352
Query: 404 MLTAYAMHGHGKEGIAHFRRILASGFRPD 432
+L + +H + + G R++ PD
Sbjct: 353 LLNSCKIHANVELGEIALERLIE--LEPD 379
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 7/86 (8%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCV---SWNSVVTACAANGLVLEALECLERMSSLDNETP 57
MY KCG + A++VF + RD V SWN+++T A +G EAL+ E M+ + P
Sbjct: 220 MYAKCGCVGSAREVFDKILVRDAVLVVSWNAMITGYAMHGHATEALDLFEEMNRV--AKP 277
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLF 83
+ +++ V+ + G EE G +F
Sbjct: 278 DHITFVGVLSACSHGGLLEE--GWMF 301
>gi|356531902|ref|XP_003534515.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 1011
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 185/618 (29%), Positives = 320/618 (51%), Gaps = 58/618 (9%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y K ++D A+K+F +P+R N
Sbjct: 333 LYVKSSNMDHARKLFDEIPQR------------------------------------NTQ 356
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+ +I GF++ G E + M+A+G PN TLSS+ C+ L LGK H ++
Sbjct: 357 TWTILISGFSRAGSSEVVFKLFREMRAKGACPNQYTLSSLFKCCSLDINLQLGKGVHAWM 416
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
RNG ++ + N ++D+Y +C A ++F + + VS N +I Y G+V ++
Sbjct: 417 LRNGIDADVVLGNSILDLYLKCKVFEYAERVFELMNEGDVVSWNIMISAYLRAGDVEKSL 476
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
++F ++ + + ++SWN+++ G + +A ++ G E + TF LI
Sbjct: 477 DMFRRLPY----KDVVSWNTIVDGLMQFGYERQALEQLY-CMVECGTEFSVVTFSIALIL 531
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCR-----YQDLVAAQMAFDEIEN- 294
+ ++ + G+++H + + G D F+ +LVEMYC+ +V + D ++N
Sbjct: 532 SSSLSLVELGRQLHGMVLKFGFCRDGFIRSSLVEMYCKCGRMDNASIVLKDVPLDFLKNG 591
Query: 295 -----IENLLGKMKEDGFEPNVYTWNA-----MQLFSEMLSLDLTPDIYTVGIILSACSS 344
+ L + G + Y WN ++ F M+ + DI TV I+SAC++
Sbjct: 592 NAGVTCKELKAGIVSWGLMVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISACAN 651
Query: 345 LATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAM 404
+E G+ VHAY + G+ D ++G++L+DMY+K GSL A +++ + P++V +M
Sbjct: 652 AGILEFGRHVHAYNHKIGHRIDAYVGSSLIDMYSKSGSLDDAWTIFRQTNEPNIVFWTSM 711
Query: 405 LTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYD 463
++ A+HG GK+ I F +L G P+ ++FL L+AC HAG ++ G +F +M Y
Sbjct: 712 ISGCALHGQGKQAICLFEEMLNQGIIPNEVTFLGVLNACCHAGLLEEGCRYFRMMKDAYC 771
Query: 464 VKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAA 523
+ P ++H T MVDL RAG L E FI + ++ + +W + L C H N+E G+ +
Sbjct: 772 INPGVEHCTSMVDLYGRAGHLTETKNFIFENGISHLTSVWKSFLSSCRLHKNVEMGKWVS 831
Query: 524 DRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKF 583
+ L+++ P++ G YV+L+N+ A RW + AR R M R + K PG SWI+ +D+IH F
Sbjct: 832 EMLLQVAPSDPGAYVLLSNMCASNHRWDEAARVRSLMHQRGIKKQPGQSWIQLKDQIHTF 891
Query: 584 RASDRSHDRSEEIYTIID 601
DRSH + EEIY+ +D
Sbjct: 892 IMGDRSHPQDEEIYSYLD 909
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 102/500 (20%), Positives = 209/500 (41%), Gaps = 95/500 (19%)
Query: 116 FHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGN 175
H +NG + N L+ +Y + +M A K+F + +N + +I G+ G+
Sbjct: 311 LHALSVKNGSLQTLNSANYLLTLYVKSSNMDHARKLFDEIPQRNTQTWTILISGFSRAGS 370
Query: 176 VAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFG 235
+ F +FR++ + G P +T
Sbjct: 371 -----------------------------------SEVVFKLFREMRAK-GACPNQYTLS 394
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE-- 293
S+ C+ +L+ GK +HA + G+ +D +G +++++Y + + A+ F+ +
Sbjct: 395 SLFKCCSLDINLQLGKGVHAWMLRNGIDADVVLGNSILDLYLKCKVFEYAERVFELMNEG 454
Query: 294 ----------------NIENLLGKMKEDGFEPNVYTWNA-----MQLFSEMLSLDLTPDI 332
++E L + ++ +V +WN MQ E +L+ +
Sbjct: 455 DVVSWNIMISAYLRAGDVEKSLDMFRRLPYK-DVVSWNTIVDGLMQFGYERQALEQLYCM 513
Query: 333 YTVGIILSACS---------SLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSL 383
G S + SL+ +E G+Q+H ++ G+ D I ++LV+MY KCG +
Sbjct: 514 VECGTEFSVVTFSIALILSSSLSLVELGRQLHGMVLKFGFCRDGFIRSSLVEMYCKCGRM 573
Query: 384 KHARLAYKRISTPDLVSQNA----------------MLTAYAMHGHGKEGIAHFRRILAS 427
+A + K + L + NA M++ Y +G ++G+ FR ++
Sbjct: 574 DNASIVLKDVPLDFLKNGNAGVTCKELKAGIVSWGLMVSGYVWNGKYEDGLKTFRLMVRE 633
Query: 428 GFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHY--TCMVDLLSRAGEL 484
D + + +SAC +AG ++ G + AY + + + Y + ++D+ S++G L
Sbjct: 634 LVVVDIRTVTTIISACANAGILEFGRH---VHAYNHKIGHRIDAYVGSSLIDMYSKSGSL 690
Query: 485 GEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIE--LEPNNTGNYVMLAN 542
+A+ ++ P+ V W +++ GC HG + + ++ + PN ++ + N
Sbjct: 691 DDAWTIFRQTN-EPNIVFWTSMISGCALHGQGKQAICLFEEMLNQGIIPNEV-TFLGVLN 748
Query: 543 LFAYAGRWSDLARTRQKMKD 562
+AG + R + MKD
Sbjct: 749 ACCHAGLLEEGCRYFRMMKD 768
>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 879
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 198/649 (30%), Positives = 321/649 (49%), Gaps = 84/649 (12%)
Query: 27 NSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQ 86
N++V G V EA + + N VSW+ ++ F +N +A+ + M
Sbjct: 139 NALVAMYGGFGFVDEARRVFDEAA----RDRNAVSWNGMMSAFVKNDRCSDAVELFGEMV 194
Query: 87 AEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDML 146
G+ PN S V+ AC + L G++ H + R G+ + F N LVD+Y + GD+
Sbjct: 195 WSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDIH 254
Query: 147 SALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNS------ 200
A +F K + VS N I G +G+ A EL QM+ G+ + + +S
Sbjct: 255 MAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACA 314
Query: 201 -------------------------------MISGYVDNSLYDEAFSMF-----RDLLM- 223
++ Y L D+A +F +DLL+
Sbjct: 315 GAGAGAFALGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDARKVFEWIPRKDLLLW 374
Query: 224 ------------------------RDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIA 259
++G + T +VL + A + ++ ++HALA
Sbjct: 375 NALISGCSHGGCHGESLSLFCRMRKEGSDINRTTLAAVLKSTASLEAISDTTQVHALAEK 434
Query: 260 LGLQSDTFVGGALVEMY-----CRYQDLVAAQMAFDEIENIENLLGKMKE-DGFEPNVYT 313
+G SD+ V L++ Y RY + V + + D I +++ + + D E
Sbjct: 435 IGFLSDSHVVNGLIDSYWKCNCLRYANKVFEEHSSDNIIAFTSMITALSQCDHGE----- 489
Query: 314 WNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTAL 373
+A++LF EML L PD + + +L+AC+SL+ E+GKQVHA+ I+ + +DV G AL
Sbjct: 490 -DAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRKFMTDVFAGNAL 548
Query: 374 VDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDH 433
V YAKCGS++ A LA+ + +VS +AM+ A HGHGK + FRR++ P+H
Sbjct: 549 VYTYAKCGSIEDADLAFSGLPDKGVVSWSAMIGGLAQHGHGKRALDVFRRMVDERIAPNH 608
Query: 434 ISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIK 492
I+ S L AC HAG + +F M + + + +HY+CM+DLL RAG+L +A E +
Sbjct: 609 ITLTSVLCACNHAGLVDEAKGYFSSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVN 668
Query: 493 KIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSD 552
+P ++ +WGALL H + E G++AA++L LEP +G +V+LAN +A AG W +
Sbjct: 669 SMPFEANAAVWGALLAASRVHRDPELGKLAAEKLFVLEPEKSGTHVLLANTYASAGMWDE 728
Query: 553 LARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
+A+ R+ MKD ++ K P SW+E +D +H F D+SH R+ +IY ++
Sbjct: 729 VAKVRKLMKDSKVKKEPAMSWVELKDRVHTFIVGDKSHPRARDIYAKLE 777
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 120/435 (27%), Positives = 201/435 (46%), Gaps = 72/435 (16%)
Query: 96 TLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKF 155
++S +L A Q L LG H ++ ++G + N L+ Y +C SA ++F +
Sbjct: 6 SISPLLTRYAATQSLFLGAHIHAHLLKSGLLHA--FRNHLLSFYSKCRLPGSARRVFDE- 62
Query: 156 SIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAF 215
C+ +SW+S+++ Y +N+L EA
Sbjct: 63 ---TPDPCH-------------------------------VSWSSLVTAYSNNALPREAL 88
Query: 216 SMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEM 275
+ FR + R G+ F +++ CA L G ++HA+A++ GL D FV ALV M
Sbjct: 89 AAFRAMRAR-GVRCNEFAL-PIVLKCAPDAGL--GVQVHAVAVSTGLSGDIFVANALVAM 144
Query: 276 YCRYQDLVAAQMAFDEIENIENLL---GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDI 332
Y + + A+ FDE N + G M F N +A++LF EM+ + P+
Sbjct: 145 YGGFGFVDEARRVFDEAARDRNAVSWNGMMS--AFVKNDRCSDAVELFGEMVWSGVRPNE 202
Query: 333 YTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKR 392
+ +++AC+ +E G++VHA +R GYD DV ALVDMY+K G + A L + +
Sbjct: 203 FGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMAALVFGK 262
Query: 393 ISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSAC--------- 443
+ D+VS NA ++ +HGH + + ++ +SG P+ + S L AC
Sbjct: 263 VPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGAGAGAFA 322
Query: 444 ----VHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPD 499
+H IK ++ D + +VD+ ++ G L +A + + IP D
Sbjct: 323 LGRQIHGFMIKACADSDDYIG-----------VALVDMYAKYGLLDDARKVFEWIPR-KD 370
Query: 500 SVMWGALLGGCVSHG 514
++W AL+ GC SHG
Sbjct: 371 LLLWNALISGC-SHG 384
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 107/380 (28%), Positives = 175/380 (46%), Gaps = 44/380 (11%)
Query: 54 NETPNL--VSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLS 111
+ETP+ VSWS+++ ++ N EA+ M+A G+ N L VL CA
Sbjct: 61 DETPDPCHVSWSSLVTAYSNNALPREALAAFRAMRARGVRCNEFALPIVLK-CA--PDAG 117
Query: 112 LGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSI-KNEVSCNTIIVGY 170
LG + H G + FV N LV +Y G + A ++F + + +N VS N ++ +
Sbjct: 118 LGVQVHAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAF 177
Query: 171 CENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPT 230
+N ++A ELF +M W+ G+ P
Sbjct: 178 VKNDRCSDAVELFGEM----------VWS--------------------------GVRPN 201
Query: 231 SFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFD 290
F F V+ AC L G+++HA+ + G D F ALV+MY + D+ A + F
Sbjct: 202 EFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMAALVFG 261
Query: 291 EIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILS--ACSSLATM 348
++ + + G + + +A++L +M S L P+++T+ IL A +
Sbjct: 262 KVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGAGAGAF 321
Query: 349 ERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAY 408
G+Q+H + I+ DSD +IG ALVDMYAK G L AR ++ I DL+ NA+++
Sbjct: 322 ALGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDARKVFEWIPRKDLLLWNALISGC 381
Query: 409 AMHGHGKEGIAHFRRILASG 428
+ G E ++ F R+ G
Sbjct: 382 SHGGCHGESLSLFCRMRKEG 401
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 104/455 (22%), Positives = 179/455 (39%), Gaps = 106/455 (23%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G + A VF +P+ D VSWN+ ++ C +G ALE L
Sbjct: 246 MYSKLGDIHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELL-------------- 291
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLP--ACARLQKLSLGKEFHG 118
+M++ GL PN TLSS+L A A +LG++ HG
Sbjct: 292 ----------------------LQMKSSGLVPNVFTLSSILKACAGAGAGAFALGRQIHG 329
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
++ + S+ ++ LVD+Y + G + A K+F K+ + N +I G G E
Sbjct: 330 FMIKACADSDDYIGVALVDMYAKYGLLDDARKVFEWIPRKDLLLWNALISGCSHGGCHGE 389
Query: 179 ARELF-------------------------------DQMEHLGVQRGIISWNSMISGYVD 207
+ LF Q+ L + G +S + +++G +D
Sbjct: 390 SLSLFCRMRKEGSDINRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLSDSHVVNGLID 449
Query: 208 -----------NSLYDE------------------------AFSMFRDLLMRDGIEPTSF 232
N +++E A +F ++L R G+EP F
Sbjct: 450 SYWKCNCLRYANKVFEEHSSDNIIAFTSMITALSQCDHGEDAIKLFMEML-RKGLEPDPF 508
Query: 233 TFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI 292
S+L ACA +++ +GK++HA I +D F G ALV Y + + A +AF +
Sbjct: 509 VLSSLLNACASLSAYEQGKQVHAHLIKRKFMTDVFAGNALVYTYAKCGSIEDADLAFSGL 568
Query: 293 ENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGK 352
+ + G + + A+ +F M+ + P+ T+ +L AC+ ++ K
Sbjct: 569 PDKGVVSWSAMIGGLAQHGHGKRALDVFRRMVDERIAPNHITLTSVLCACNHAGLVDEAK 628
Query: 353 QVHAYAIRC-GYDSDVHIGTALVDMYAKCGSLKHA 386
+ G D + ++D+ + G L A
Sbjct: 629 GYFSSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDA 663
>gi|57899090|dbj|BAD86909.1| putative PPR986-12 [Oryza sativa Japonica Group]
Length = 560
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 187/574 (32%), Positives = 291/574 (50%), Gaps = 64/574 (11%)
Query: 27 NSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQ 86
+++++ + G V A + M D +V+W+A++ G+ NG EA+ + RM
Sbjct: 7 TTLISSLCSRGAVCHARALFDEMPERD-----VVAWTAMLSGYASNGLRREALDVFRRMV 61
Query: 87 AEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDML 146
A G PN TLSSVL AC ++ H R G P+VVN L+D Y +
Sbjct: 62 AAGAAPNEYTLSSVLTACRGPCAPAMAMPLHAVAVRRGVDRMPYVVNALIDSYASLAE-- 119
Query: 147 SALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYV 206
V +AR LFD LG R SW SMI+GY
Sbjct: 120 ----------------------------GVVDARRLFDA---LGSGRTAASWTSMIAGYA 148
Query: 207 DNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDT 266
+F+ +L +DG+E ++F L AC + L G+++H I L +
Sbjct: 149 RWGQERTGLRLFKTML-KDGVELSTFACSIALHACTLVIDLCLGQQLHLQCIKKALDVNL 207
Query: 267 FVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAM--------- 317
V +L++MYC ++ A+ FD E N+ TWN M
Sbjct: 208 AVVNSLIDMYCTCARILDARSLFDGTP--------------ERNLITWNTMIAGYSQCDP 253
Query: 318 -QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDM 376
+L ++ P+ +T+ I SAC+ LA + GKQVH +R Y D+ +G ALVDM
Sbjct: 254 LMALQLLLEMNDEPNCFTLTSITSACADLAALRCGKQVHGAVLRRSYSDDLQMGNALVDM 313
Query: 377 YAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISF 436
Y+KCGS+ +A+ + R+ D S +M+ Y M+G+G E + F ++ +G PDH+ F
Sbjct: 314 YSKCGSITNAKNVFDRMGCKDKFSWTSMIAGYGMNGYGNEAVQLFSSMIHAGVHPDHVVF 373
Query: 437 LSALSACVHAGSIKTGSEFF-DLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIP 495
LS +S+C HAG + G FF ++ Y+++P+ + Y +V+LL+RAG L EA + I +P
Sbjct: 374 LSLISSCSHAGLVDEGWNFFRSMINEYNLQPNKEVYGSVVNLLARAGRLREALDLIDTMP 433
Query: 496 MAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLAR 555
APD +WGALLG H N+E G++AA ++ E+ P++ NY+MLA+++A +W + A
Sbjct: 434 FAPDEYVWGALLGASKMHNNVEMGRLAARKITEINPDDVKNYIMLASIYAAGSKWGEYAF 493
Query: 556 TRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRS 589
TR+ ++ K G SWIE D+++ F A+D S
Sbjct: 494 TRRSLRGIGSRKEAGISWIEVMDKMYSFTAADSS 527
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 2/111 (1%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGS+ +AK VF M +D SW S++ NG EA++ M P+ V
Sbjct: 313 MYSKCGSITNAKNVFDRMGCKDKFSWTSMIAGYGMNGYGNEAVQLFSSMIHAGVH-PDHV 371
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKL 110
+ ++I + G +E M E L+PN SV+ AR +L
Sbjct: 372 VFLSLISSCSHAGLVDEGWNFFRSMINEYNLQPNKEVYGSVVNLLARAGRL 422
>gi|15240444|ref|NP_198063.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635756|sp|O04659.2|PP398_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g27110
gi|332006268|gb|AED93651.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 691
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 191/601 (31%), Positives = 302/601 (50%), Gaps = 78/601 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K +++ +VF MPERD +
Sbjct: 151 MYAKFNLFENSLQVFDEMPERD------------------------------------VA 174
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ VI F Q+G E+A+ + RM++ G EPN+ +L+ + AC+RL L GKE H
Sbjct: 175 SWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKC 234
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ GF + +V + LVD+Y +C D L AR
Sbjct: 235 VKKGFELDEYVNSALVDMYGKC-DCLEV------------------------------AR 263
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
E+F +M ++ +++WNSMI GYV + +++ +G P+ T S+L+A
Sbjct: 264 EVFQKMP----RKSLVAWNSMIKGYVAKGDSKSCVEILNRMII-EGTRPSQTTLTSILMA 318
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE-NIENLL 299
C+ +L GK IH I + +D +V +L+++Y + + A+ F + + ++
Sbjct: 319 CSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESW 378
Query: 300 GKMKEDGFEPNVYTW-NAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYA 358
M +V W A++++ +M+S+ + PD+ T +L ACS LA +E+GKQ+H
Sbjct: 379 NVMISSYI--SVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSI 436
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGI 418
++D + +AL+DMY+KCG+ K A + I D+VS M++AY HG +E +
Sbjct: 437 SESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREAL 496
Query: 419 AHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMVDL 477
F + G +PD ++ L+ LSAC HAG I G +FF M + Y ++P ++HY+CM+D+
Sbjct: 497 YQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDI 556
Query: 478 LSRAGELGEAYEFIKKIPMAPDSV-MWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGN 536
L RAG L EAYE I++ P D+ + L C H G A L+E P++
Sbjct: 557 LGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDAST 616
Query: 537 YVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEI 596
Y++L NL+A W R R KMK+ + K PGCSWIE D++ F A DRSH R+E +
Sbjct: 617 YMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFFAEDRSHLRAENV 676
Query: 597 Y 597
Y
Sbjct: 677 Y 677
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 112/434 (25%), Positives = 182/434 (41%), Gaps = 64/434 (14%)
Query: 97 LSSVLPACARLQK-LSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKF 155
L S+L C K L K H I G + + L++VY C D SA +F F
Sbjct: 6 LLSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENF 65
Query: 156 SIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAF 215
I+++ + WNS++SGY NS++ +
Sbjct: 66 DIRSD----------------------------------VYIWNSLMSGYSKNSMFHDTL 91
Query: 216 SMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEM 275
+F+ LL P SFTF +V+ A + G+ IH L + G D V +LV M
Sbjct: 92 EVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGM 151
Query: 276 YCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWN--------------AMQLFS 321
Y ++ + FDE+ E +V +WN A++LF
Sbjct: 152 YAKFNLFENSLQVFDEMP--------------ERDVASWNTVISCFYQSGEAEKALELFG 197
Query: 322 EMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCG 381
M S P+ ++ + +SACS L +ERGK++H ++ G++ D ++ +ALVDMY KC
Sbjct: 198 RMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCD 257
Query: 382 SLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALS 441
L+ AR ++++ LV+ N+M+ Y G K + R++ G RP + S L
Sbjct: 258 CLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILM 317
Query: 442 ACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSV 501
AC + ++ G + V + ++DL + GE A K +
Sbjct: 318 ACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSK-TQKDVAE 376
Query: 502 MWGALLGGCVSHGN 515
W ++ +S GN
Sbjct: 377 SWNVMISSYISVGN 390
>gi|413942600|gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
Length = 693
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 195/603 (32%), Positives = 311/603 (51%), Gaps = 80/603 (13%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC DA++VF MP RD V
Sbjct: 60 MYFKCRRPADARRVFDRMPSRD------------------------------------RV 83
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE--GLEPNARTLSSVLPACARLQKLSLGKEFHG 118
+W+AV+ G+ +NG A+ + RMQ E G P++ TL SVLPACA + L +E H
Sbjct: 84 AWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADARALHACREVHA 143
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
+ R G + LV+V ++ YC+ G V
Sbjct: 144 FALRAGL-------DELVNV------------------------STAVLDAYCKCGAVEA 172
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
AR +FD M R +SWN+MI GY DN EA ++F ++ ++G++ T + + L
Sbjct: 173 ARAVFDCMP----VRNSVSWNAMIDGYADNGNATEAMALFWRMV-QEGVDVTDASVLAAL 227
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMY--CRYQDLVAAQMAFDEIENIE 296
AC ++ L + + +H L + +GL S+ V AL+ Y C+ DL AAQ+ F+E+ N +
Sbjct: 228 QACGELGYLDEVRRVHELLVRVGLSSNVSVTNALITTYAKCKRADL-AAQV-FNELGNKK 285
Query: 297 NLLG-KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVH 355
+ GF N +A +LF+ M ++ PD +T+ ++ A + ++ + + +H
Sbjct: 286 TRISWNAMILGFTQNECPEDAERLFARMQLENVRPDSFTLVSVIPAVADISDPLQARWIH 345
Query: 356 AYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGK 415
Y+IR D DV++ TAL+DMY+KCG + AR + +++ NAM+ Y HG G+
Sbjct: 346 GYSIRHQLDQDVYVLTALIDMYSKCGRVSIARRLFDSARDRHVITWNAMIHGYGSHGFGQ 405
Query: 416 EGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCM 474
+ F + +G P+ +FLS L+AC HAG + G ++F M Y ++P ++HY M
Sbjct: 406 AAVELFEEMKGTGSLPNETTFLSVLAACSHAGLVDEGQKYFASMKKDYGLEPGMEHYGTM 465
Query: 475 VDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNT 534
VDLL RAG+L EA+ FIK +P+ P ++GA+LG C H N+E + +A + EL P
Sbjct: 466 VDLLGRAGKLDEAWSFIKNMPIEPGISVYGAMLGACKLHKNVELAEESAQIIFELGPEEG 525
Query: 535 GNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSE 594
+V+LAN++A A W D+AR R M+ + + K+PG S I+ ++E+H F + +H ++
Sbjct: 526 VYHVLLANIYANASMWKDVARVRTAMEKKGLQKTPGWSIIQLKNEVHTFYSGSTNHQHAK 585
Query: 595 EIY 597
+IY
Sbjct: 586 DIY 588
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 112/458 (24%), Positives = 185/458 (40%), Gaps = 48/458 (10%)
Query: 92 PNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKI 151
P RT +++L CA L+ G+ H + G S L ++Y +C A ++
Sbjct: 14 PVLRTFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRV 73
Query: 152 FSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLY 211
F + ++ V+ N ++ GY NG + A E +M+ + G
Sbjct: 74 FDRMPSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQG---EEG----------------- 113
Query: 212 DEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGA 271
G P S T SVL ACAD +L +E+HA A+ GL V A
Sbjct: 114 --------------GERPDSVTLVSVLPACADARALHACREVHAFALRAGLDELVNVSTA 159
Query: 272 LVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPD 331
+++ YC+ + AA+ FD + ++ DG+ N AM LF M+ +
Sbjct: 160 VLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMIDGYADNGNATEAMALFWRMVQEGVDVT 219
Query: 332 IYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYK 391
+V L AC L ++ ++VH +R G S+V + AL+ YAKC A +
Sbjct: 220 DASVLAALQACGELGYLDEVRRVHELLVRVGLSSNVSVTNALITTYAKCKRADLAAQVFN 279
Query: 392 RISTPDL-VSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIK 450
+ +S NAM+ + + ++ F R+ RPD + +S + A
Sbjct: 280 ELGNKKTRISWNAMILGFTQNECPEDAERLFARMQLENVRPDSFTLVSVIPAVADISDPL 339
Query: 451 TGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDS--VMWGALLG 508
+ + + T ++D+ S+ G + A A D + W A++
Sbjct: 340 QARWIHGYSIRHQLDQDVYVLTALIDMYSKCGRVSIARRLFDS---ARDRHVITWNAMIH 396
Query: 509 GCVSHGNLEFGQIAADRLIELE-----PNNTGNYVMLA 541
G SHG FGQ A + E++ PN T +LA
Sbjct: 397 GYGSHG---FGQAAVELFEEMKGTGSLPNETTFLSVLA 431
>gi|297722071|ref|NP_001173399.1| Os03g0317100 [Oryza sativa Japonica Group]
gi|255674461|dbj|BAH92127.1| Os03g0317100 [Oryza sativa Japonica Group]
Length = 706
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 188/605 (31%), Positives = 316/605 (52%), Gaps = 34/605 (5%)
Query: 3 GKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSW 62
+ G+++ A+ F+ MP R S+N+++ N L AL RM S D L S+
Sbjct: 28 ARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRD-----LASY 82
Query: 63 SAVIGGFT---QNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
+A+I G + Q D A + + P+ + +S+L R L+
Sbjct: 83 NALISGLSLRRQTLPDAAAA-----LASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQ 137
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ +S ++ GL+D G + A ++F + ++ V+ ++ GYC+ G + EA
Sbjct: 138 MPERNHVSYTVLLGGLLD----AGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEA 193
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
R LFD+M +R ++SW +MISGY N + A +F + R+ + T+ G +
Sbjct: 194 RALFDEMP----KRNVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAMLVGYIQA 249
Query: 240 A-CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
D L H +A A++ + + + AA+ F+++ ++
Sbjct: 250 GHVEDAAELFNAMPEHPVAAC----------NAMMVGFGQRGMVDAAKTVFEKMCERDDG 299
Query: 299 LGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYA 358
+E N + A+ F EML + P+ +V IL+ C++LA ++ G++VHA
Sbjct: 300 TWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAM 359
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGI 418
+RC +D DV +AL+ MY KCG+L A+ + D+V N+M+T YA HG G++ +
Sbjct: 360 LRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQAL 419
Query: 419 AHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDL 477
F + +G PD I+++ AL+AC + G +K G E F+ M ++P +HY+CMVDL
Sbjct: 420 GIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDL 479
Query: 478 LSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNY 537
L R+G + EA++ IK +P+ PD+V+WGAL+G C H N E + AA +L+ELEP N G Y
Sbjct: 480 LGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIAEFAAKKLLELEPGNAGPY 539
Query: 538 VMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASD-RSHDRSEEI 596
V+L++++ GRW D ++ R+ + R ++KSPGCSWIE +H F + D +H I
Sbjct: 540 VLLSHIYTSVGRWEDASKMRKFISSRNLNKSPGCSWIEYDKRVHLFTSGDVLAHPEHAAI 599
Query: 597 YTIID 601
I++
Sbjct: 600 LRILE 604
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 106/422 (25%), Positives = 198/422 (46%), Gaps = 22/422 (5%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y + G L DA ++F+ MPER+ VS+ ++ G V EA + M D +V+
Sbjct: 122 YVRHGLLADAIRLFQQMPERNHVSYTVLLGGLLDAGRVNEARRLFDEMPDRD-----VVA 176
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W+A++ G+ Q G EA + M N + ++++ A+ +++L ++ +
Sbjct: 177 WTAMLSGYCQAGRITEARALFDEMPKR----NVVSWTAMISGYAQNGEVNLARKLFEVMP 232
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
+S ++ G Y + G + A ++F+ +CN ++VG+ + G V A+
Sbjct: 233 ERNEVSWTAMLVG----YIQAGHVEDAAELFNAMPEHPVAACNAMMVGFGQRGMVDAAKT 288
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
+F++M +R +W++MI Y N EA S FR++L R G+ P + S+L C
Sbjct: 289 VFEKM----CERDDGTWSAMIKAYEQNEFLMEALSTFREMLWR-GVRPNYPSVISILTVC 343
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK 301
A + L G+E+HA + D F AL+ MY + +L A+ F E + ++
Sbjct: 344 AALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWN 403
Query: 302 MKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV-HAYAIR 360
G+ + A+ +F +M ++PD T L+ACS ++ G+++ ++ +
Sbjct: 404 SMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVN 463
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST-PDLVSQNAMLTAYAMHGHGKEGIA 419
+ +VD+ + G ++ A K + PD V A++ A MH + + IA
Sbjct: 464 SSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAE--IA 521
Query: 420 HF 421
F
Sbjct: 522 EF 523
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 78/190 (41%), Gaps = 42/190 (22%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG+LD AK+VF +D V WNS++T
Sbjct: 377 MYIKCGNLDKAKRVFHTFEPKDIVMWNSMIT----------------------------- 407
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
G+ Q+G E+A+G+ M+ G+ P+ T L AC+ K+ G+E +
Sbjct: 408 -------GYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSM 460
Query: 121 TRN-GFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYC---ENGNV 176
T N + +VD+ R G + A + ++ + ++G C N +
Sbjct: 461 TVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEI 520
Query: 177 AE--ARELFD 184
AE A++L +
Sbjct: 521 AEFAAKKLLE 530
>gi|297816218|ref|XP_002875992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321830|gb|EFH52251.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 721
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 193/602 (32%), Positives = 312/602 (51%), Gaps = 48/602 (7%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KCG L A+ F E + S+N +V A A + + A + + +N P+ V
Sbjct: 52 LYSKCGCLSYARAAFDSTEEPNVFSYNVIVKAYAKDSKIHIARQLFD-----ENPQPDTV 106
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
S++ +I G+ A+ + RM+ G E + TLS ++ AC ++ L K+ H +
Sbjct: 107 SYNTLISGYADARETVAAMVLFKRMRELGFEVDGFTLSGLIAACC--DRVDLIKQLHCFA 164
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
GF S V N V Y + G + EA
Sbjct: 165 VSGGFDSYSSVNNAFVTYYSK-------------------------------GGLLREAV 193
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+F M+ L R +SWNSMI Y + +A +++++++ + G + FT SVL A
Sbjct: 194 SVFYGMDGL---RDEVSWNSMIVAYGQHKEGAKALALYKEMIFK-GFKIDMFTLASVLNA 249
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMY--CRYQD-LVAAQMAFDEIENIEN 297
++ L G++ H I G ++ VG L++ Y C +D + ++ F EI + +
Sbjct: 250 LTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGRDGMSDSEKVFQEILSPDL 309
Query: 298 LLGKMKEDGFEPNV-YTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHA 356
+L G+ N ++ A++ F +M + PD + + SACS+L++ +GKQ+H
Sbjct: 310 VLWNTMISGYSMNEEHSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQGKQIHG 369
Query: 357 YAIRCGYDSD-VHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGK 415
AI+ S+ + + AL+ +Y K G+L AR + R+ + VS N M+ YA HGHG
Sbjct: 370 LAIKSNIPSNRISVNNALISLYYKSGNLLDARRVFDRMPELNAVSFNCMIKGYAQHGHGT 429
Query: 416 EGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCM 474
E + ++R+L SG P++I+F++ LSAC H G + G ++F+ M + ++P +HY+CM
Sbjct: 430 EALRLYQRMLDSGIAPNNITFVAILSACAHCGKVDEGQKYFNTMKETFKIEPEAEHYSCM 489
Query: 475 VDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNT 534
+DLL RAG+L EA FI +P P SV W ALLG C H N+ + AA L+ ++P
Sbjct: 490 IDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAAKELMVMQPLAA 549
Query: 535 GNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSE 594
YVMLAN++A AG+W ++A R+ M+ +R+ K PGCSWIE + + H F A D SH
Sbjct: 550 TPYVMLANMYADAGKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIR 609
Query: 595 EI 596
E+
Sbjct: 610 EV 611
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 130/498 (26%), Positives = 225/498 (45%), Gaps = 69/498 (13%)
Query: 110 LSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVG 169
L GK H ++ S+ ++ N V++Y +CG + A F N S N I+
Sbjct: 24 LFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGCLSYARAAFDSTEEPNVFSYNVIVKA 83
Query: 170 YCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRD-GIE 228
Y ++ + AR+LFD+ Q +S+N++ISGY D A +F+ MR+ G E
Sbjct: 84 YAKDSKIHIARQLFDE----NPQPDTVSYNTLISGYADARETVAAMVLFKR--MRELGFE 137
Query: 229 PTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMA 288
FT ++ AC D L K++H A++ G S + V A V Y + L A
Sbjct: 138 VDGFTLSGLIAACCDRVDLI--KQLHCFAVSGGFDSYSSVNNAFVTYYSKGGLLREAVSV 195
Query: 289 FDEIENIENLL---------GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIIL 339
F ++ + + + G+ KE A+ L+ EM+ D++T+ +L
Sbjct: 196 FYGMDGLRDEVSWNSMIVAYGQHKEGA--------KALALYKEMIFKGFKIDMFTLASVL 247
Query: 340 SACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCG---SLKHARLAYKRISTP 396
+A +SL + G+Q H I+ G+ + H+G+ L+D Y+KCG + + ++ I +P
Sbjct: 248 NALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGRDGMSDSEKVFQEILSP 307
Query: 397 DLVSQNAMLTAYAMH-GHGKEGIAHFRRILASGFRPDHISFLSALSAC-----------V 444
DLV N M++ Y+M+ H +E + FR++ G RPD SF+ SAC +
Sbjct: 308 DLVLWNTMISGYSMNEEHSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQGKQI 367
Query: 445 HAGSIKTG-------------------SEFFDLMAYYDVKPSLK--HYTCMVDLLSRAGE 483
H +IK+ D +D P L + CM+ ++ G
Sbjct: 368 HGLAIKSNIPSNRISVNNALISLYYKSGNLLDARRVFDRMPELNAVSFNCMIKGYAQHGH 427
Query: 484 LGEAYEFIKKI---PMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIE---LEPNNTGNY 537
EA +++ +AP+++ + A+L C G ++ GQ + + E +EP +Y
Sbjct: 428 GTEALRLYQRMLDSGIAPNNITFVAILSACAHCGKVDEGQKYFNTMKETFKIEP-EAEHY 486
Query: 538 VMLANLFAYAGRWSDLAR 555
+ +L AG+ + R
Sbjct: 487 SCMIDLLGRAGKLEEAER 504
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 142/330 (43%), Gaps = 54/330 (16%)
Query: 215 FSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVE 274
F FRDLL++ E FT GK +HAL + + S T++ V
Sbjct: 8 FKSFRDLLLKSVAERDLFT----------------GKSLHALYVKSIVASSTYLSNHFVN 51
Query: 275 MYCRYQDLVAAQMAFDEIENIE-----------------NLLGKMKEDGFEPNVYTWN-- 315
+Y + L A+ AFD E ++ ++ ++ +P+ ++N
Sbjct: 52 LYSKCGCLSYARAAFDSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDENPQPDTVSYNTL 111
Query: 316 ------------AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGY 363
AM LF M L D +T+ +++AC + KQ+H +A+ G+
Sbjct: 112 ISGYADARETVAAMVLFKRMRELGFEVDGFTLSGLIAACCDRVDLI--KQLHCFAVSGGF 169
Query: 364 DSDVHIGTALVDMYAKCGSLKHA-RLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFR 422
DS + A V Y+K G L+ A + Y D VS N+M+ AY H G + +A ++
Sbjct: 170 DSYSSVNNAFVTYYSKGGLLREAVSVFYGMDGLRDEVSWNSMIVAYGQHKEGAKALALYK 229
Query: 423 RILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAG 482
++ GF+ D + S L+A + G +F + + + ++D S+ G
Sbjct: 230 EMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCG 289
Query: 483 ---ELGEAYEFIKKIPMAPDSVMWGALLGG 509
+ ++ + ++I ++PD V+W ++ G
Sbjct: 290 GRDGMSDSEKVFQEI-LSPDLVLWNTMISG 318
>gi|49387750|dbj|BAD26238.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|218190136|gb|EEC72563.1| hypothetical protein OsI_05996 [Oryza sativa Indica Group]
Length = 803
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 179/627 (28%), Positives = 310/627 (49%), Gaps = 77/627 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGS+ DA ++F M PN V
Sbjct: 185 MYTKCGSVGDAVRLFYGMAR------------------------------------PNEV 208
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARL--------QKLSL 112
S++A++GG Q G ++A+ + RM G+ + ++SSVL ACA+ + L
Sbjct: 209 SFTAMMGGLAQTGSIDDALRLFARMCRSGVPVDPVSVSSVLGACAQACATDYSVARAFRL 268
Query: 113 GKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCE 172
G+ H + R GF S+ V N L+D+Y +C +M A+K+F VS N +I G+ +
Sbjct: 269 GQAIHALVVRKGFGSDQHVGNSLIDMYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQ 328
Query: 173 NGNVAEARELFDQMEHLGVQRG-------------------------------IISWNSM 201
G+ A+A E+ M+ G + + +WN++
Sbjct: 329 EGSCAKAVEVLSLMQEAGFEPNEVTYSNLLASCIKARDVHSARAMFDKISRPSVTTWNTL 388
Query: 202 ISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALG 261
+SGY + + +FR + ++ ++P T +L +C+ + L G+++H+ ++
Sbjct: 389 LSGYCQEEQHQDTIELFRRMQHQN-VQPDRTTLAVILSSCSKLGILDFGRQVHSASVRFL 447
Query: 262 LQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFS 321
L +D FV LV+MY + + A+ F+++ + + G + A F
Sbjct: 448 LHNDMFVASGLVDMYSKCGQIGIARSIFNKMTERDVVCWNSIISGLTIHSLNKEAFDFFK 507
Query: 322 EMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCG 381
+M + P + ++++CS L+++ G+Q+HA ++ GYD +V++G+AL+DMYAKCG
Sbjct: 508 QMRENGIMPTESSYASMINSCSRLSSIPHGRQIHAQVMKDGYDQNVYVGSALIDMYAKCG 567
Query: 382 SLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALS 441
++ ARL + + ++V+ N M+ YA +G G + + F +L + +PD ++F++ L+
Sbjct: 568 NMDDARLFFDTMMMKNIVAWNEMIHGYAQNGLGDKAVELFEYMLTTEQKPDAVTFIAVLT 627
Query: 442 ACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDS 500
C H+G + FF+ M Y + P +HYTC++D L RAG E I K+P D
Sbjct: 628 GCSHSGLVDKAMAFFNSMENSYGIIPLAEHYTCLIDALGRAGRFVEVEALIHKMPCKDDP 687
Query: 501 VMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKM 560
++W LL CV H N E G+ AA+ L ++P N YV+L+N++A GR D + R M
Sbjct: 688 IIWEVLLAACVVHHNAELGKCAAEHLFRIDPKNPSPYVLLSNIYASLGRHGDASAVRALM 747
Query: 561 KDRRMHKSPGCSWIEDRDEIHKFRASD 587
+R + K G SWI+ +D + F +D
Sbjct: 748 SNRGVVKGRGYSWIDQKDGVRAFMVAD 774
Score = 201 bits (511), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 152/589 (25%), Positives = 259/589 (43%), Gaps = 117/589 (19%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y + G A F+ +P + S+N+ ++A G + A + L M N V
Sbjct: 52 LYSRAGLPRHALLAFRALPSPNDYSYNAALSAACRAGDLDAARDLLGGMPRR-----NAV 106
Query: 61 SWSAVIGGFTQN-GYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
SW+ VI ++ G EA+ M RM+AEGL P TL+SVL AC L L G+ HG
Sbjct: 107 SWNTVISALARSPGDGGEAVEMYGRMRAEGLLPTHFTLASVLSACGGLAALGDGRRCHGV 166
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ G +N FV N L+ +Y +CG + A+++F + NEVS ++ G + G++ +A
Sbjct: 167 AVKVGLDANQFVENALLGMYTKCGSVGDAVRLFYGMARPNEVSFTAMMGGLAQTGSIDDA 226
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
LF +M GV ++P S + SVL
Sbjct: 227 LRLFARMCRSGVP----------------------------------VDPVSVS--SVLG 250
Query: 240 ACAD--------MNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDE 291
ACA + R G+ IHAL + G SD VG +L++MY + ++ A F+
Sbjct: 251 ACAQACATDYSVARAFRLGQAIHALVVRKGFGSDQHVGNSLIDMYTKCVEMDEAVKVFES 310
Query: 292 IENIE---------------------NLLGKMKEDGFEPN-------------------- 310
+ ++ +L M+E GFEPN
Sbjct: 311 LPSVTIVSWNILITGFGQEGSCAKAVEVLSLMQEAGFEPNEVTYSNLLASCIKARDVHSA 370
Query: 311 -----------VYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSSL 345
V TWN + +LF M ++ PD T+ +ILS+CS L
Sbjct: 371 RAMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQNVQPDRTTLAVILSSCSKL 430
Query: 346 ATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAML 405
++ G+QVH+ ++R +D+ + + LVDMY+KCG + AR + +++ D+V N+++
Sbjct: 431 GILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARSIFNKMTERDVVCWNSII 490
Query: 406 TAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVK 465
+ +H KE F+++ +G P S+ S +++C SI G + +
Sbjct: 491 SGLTIHSLNKEAFDFFKQMRENGIMPTESSYASMINSCSRLSSIPHGRQIHAQVMKDGYD 550
Query: 466 PSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
++ + ++D+ ++ G + +A F + M + V W ++ G +G
Sbjct: 551 QNVYVGSALIDMYAKCGNMDDARLFFDTM-MMKNIVAWNEMIHGYAQNG 598
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 138/341 (40%), Gaps = 55/341 (16%)
Query: 263 QSDTFVGGALVEMYCR---------------------YQDLVAAQMAFDEIENIENLLGK 301
+DTF+ LVE+Y R Y ++A +++ +LLG
Sbjct: 40 AADTFLANRLVELYSRAGLPRHALLAFRALPSPNDYSYNAALSAACRAGDLDAARDLLGG 99
Query: 302 MKEDGFEPNVYTWN---------------AMQLFSEMLSLDLTPDIYTVGIILSACSSLA 346
M N +WN A++++ M + L P +T+ +LSAC LA
Sbjct: 100 MPRR----NAVSWNTVISALARSPGDGGEAVEMYGRMRAEGLLPTHFTLASVLSACGGLA 155
Query: 347 TMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLT 406
+ G++ H A++ G D++ + AL+ MY KCGS+ A + ++ P+ VS AM+
Sbjct: 156 ALGDGRRCHGVAVKVGLDANQFVENALLGMYTKCGSVGDAVRLFYGMARPNEVSFTAMMG 215
Query: 407 AYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVH--------AGSIKTGSEFFDL 458
A G + + F R+ SG D +S S L AC A + + G L
Sbjct: 216 GLAQTGSIDDALRLFARMCRSGVPVDPVSVSSVLGACAQACATDYSVARAFRLGQAIHAL 275
Query: 459 MAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEF 518
+ ++D+ ++ E+ EA + + +P + V W L+ G G+
Sbjct: 276 VVRKGFGSDQHVGNSLIDMYTKCVEMDEAVKVFESLP-SVTIVSWNILITGFGQEGSCAK 334
Query: 519 GQIAADRLIE--LEPNNTGNYVMLANLFAYAGRWSDLARTR 557
+ E EPN V +NL A + D+ R
Sbjct: 335 AVEVLSLMQEAGFEPNE----VTYSNLLASCIKARDVHSAR 371
>gi|242043708|ref|XP_002459725.1| hypothetical protein SORBIDRAFT_02g009440 [Sorghum bicolor]
gi|241923102|gb|EER96246.1| hypothetical protein SORBIDRAFT_02g009440 [Sorghum bicolor]
Length = 691
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 185/561 (32%), Positives = 302/561 (53%), Gaps = 9/561 (1%)
Query: 46 LERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRM-QAEGLEPNARTLSSVLPAC 104
L SSL + + ++ +I +G A+ M + + P+A T VL AC
Sbjct: 110 LPAASSLAAGSTSPEPYNVLISACLSHGLPRHALAAYQEMIDKDAVPPDAFTYPKVLRAC 169
Query: 105 ARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCN 164
A L+LG+ H G + F N LV +Y +CGD+++A +F ++ VS N
Sbjct: 170 AETANLALGRAVHVRAADAGMDGHLFCQNALVSMYAKCGDVVAARGVFEGMEHRDVVSWN 229
Query: 165 TIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMR 224
++I GY +G EA ELF +M+ G + ++WN++ GY+ Y A + RD++ R
Sbjct: 230 SMISGYAASGQWREAVELFRRMQAEGAEVNSVTWNTIAGGYIQMHDYRAAVGLIRDMV-R 288
Query: 225 DGIEPTSFTFGSVLI---ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQD 281
G S F +++I AC+ LR GKEIH LA+ + V A++ MY R D
Sbjct: 289 GG---ASIDFVTLVIGSNACSRAGWLRLGKEIHGLAVRMQCHEIDSVINAVITMYARCND 345
Query: 282 LVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSA 341
+ A M F + + GF + A ++F EM+ D+ P+ TV L+
Sbjct: 346 MEHALMLFRMMRCPGLVAWNTMIAGFALSDDAEAASRIFREMVCSDVQPNYVTVVTYLAL 405
Query: 342 CSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQ 401
C+ +A ++ G+++H + I+ G+ + +L+DMY+K G L A+ + + D++S
Sbjct: 406 CARVANLQHGRELHTHIIKQGFKGYRLLWNSLIDMYSKSGRLSVAQNVFDTMDDHDMISF 465
Query: 402 NAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY 461
+M+ + M G G + F+R++ SG PD I ++ LSAC H+G + G E FD M
Sbjct: 466 TSMIAGFGMQGKGIVSLRFFKRMIDSGIMPDAIIMVTVLSACSHSGLVDEGEELFDKMVK 525
Query: 462 -YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQ 520
Y +KP ++HY+CMVDL +RAG L +A E + + P P S M AL+G C GN+ G+
Sbjct: 526 SYGIKPQMEHYSCMVDLYARAGLLEKAEELLNQTPFPPTSTMVAALVGACHEQGNIIIGE 585
Query: 521 IAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEI 580
+A RL+E++ +N G+YV++AN++A AG W++LA R+ M+D + K+PG +W + +
Sbjct: 586 RSARRLLEMKTDNAGHYVLIANMYAAAGCWNELATVRKLMRDLGVMKAPGLAWADLGNGF 645
Query: 581 HKFRASDRSHDRSEEIYTIID 601
F DRS+ + EIY ++D
Sbjct: 646 TPFLVGDRSNPLAPEIYEVLD 666
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 115/416 (27%), Positives = 188/416 (45%), Gaps = 39/416 (9%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG + A+ VF+ M RD VSWNS+++ AA+G EA+E RM + E N V
Sbjct: 203 MYAKCGDVVAARGVFEGMEHRDVVSWNSMISGYAASGQWREAVELFRRMQAEGAEV-NSV 261
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+ + GG+ Q A+G++ M G + TL AC+R L LGKE HG
Sbjct: 262 TWNTIAGGYIQMHDYRAAVGLIRDMVRGGASIDFVTLVIGSNACSRAGWLRLGKEIHGLA 321
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R V+N ++ +Y RC DM AL +F V+ NT+I G+ + + AEA
Sbjct: 322 VRMQCHEIDSVINAVITMYARCNDMEHALMLFRMMRCPGLVAWNTMIAGFALSDD-AEA- 379
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
A +FR+++ D ++P T + L
Sbjct: 380 ---------------------------------ASRIFREMVCSD-VQPNYVTVVTYLAL 405
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA + +L+ G+E+H I G + + +L++MY + L AQ FD +++ + +
Sbjct: 406 CARVANLQHGRELHTHIIKQGFKGYRLLWNSLIDMYSKSGRLSVAQNVFDTMDDHDMISF 465
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
GF +++ F M+ + PD + +LSACS ++ G+++ ++
Sbjct: 466 TSMIAGFGMQGKGIVSLRFFKRMIDSGIMPDAIIMVTVLSACSHSGLVDEGEELFDKMVK 525
Query: 361 C-GYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGK 415
G + + +VD+YA+ G L+ A + P + A L A H G
Sbjct: 526 SYGIKPQMEHYSCMVDLYARAGLLEKAEELLNQTPFPPTSTMVAALVG-ACHEQGN 580
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 93/396 (23%), Positives = 157/396 (39%), Gaps = 71/396 (17%)
Query: 214 AFSMFRDLLMRDGIEPTSFTFGSVLIACADM-----NSLRKGKEIHALAIALGLQSDTFV 268
AFS R LL P + G +L A + + LR G ++H L+++LGL + +
Sbjct: 42 AFSQLRHLL------PPAAATGLLLRPIASLLHLHRSDLRVGLQLHGLSLSLGLSRFSLL 95
Query: 269 GGALVEMYCRYQDLVAAQMAF----DEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEML 324
L+ Y + + A + E L+ G +A+ + EM+
Sbjct: 96 LPRLLSFYSNHPSFLPAASSLAAGSTSPEPYNVLISACLSHGLPR-----HALAAYQEMI 150
Query: 325 SLD-LTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSL 383
D + PD +T +L AC+ A + G+ VH A G D + ALV MYAKCG +
Sbjct: 151 DKDAVPPDAFTYPKVLRACAETANLALGRAVHVRAADAGMDGHLFCQNALVSMYAKCGDV 210
Query: 384 KHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASG--------------- 428
AR ++ + D+VS N+M++ YA G +E + FRR+ A G
Sbjct: 211 VAARGVFEGMEHRDVVSWNSMISGYAASGQWREAVELFRRMQAEGAEVNSVTWNTIAGGY 270
Query: 429 -----FRP---------------DHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSL 468
+R D ++ + +AC AG ++ G E L
Sbjct: 271 IQMHDYRAAVGLIRDMVRGGASIDFVTLVIGSNACSRAGWLRLGKEIHGLAVRMQCHEID 330
Query: 469 KHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLI- 527
++ + +R ++ A + + P V W ++ G + E AA R+
Sbjct: 331 SVINAVITMYARCNDMEHALMLFRMM-RCPGLVAWNTMIAGFALSDDAE----AASRIFR 385
Query: 528 -----ELEPNNTGNYVMLANLFAYAGRWSDLARTRQ 558
+++P NYV + A R ++L R+
Sbjct: 386 EMVCSDVQP----NYVTVVTYLALCARVANLQHGRE 417
>gi|218184996|gb|EEC67423.1| hypothetical protein OsI_34621 [Oryza sativa Indica Group]
Length = 799
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 191/614 (31%), Positives = 306/614 (49%), Gaps = 60/614 (9%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKC SLDDA F MPER N V
Sbjct: 193 MYGKCRSLDDALCFFYGMPER------------------------------------NWV 216
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW + I G QN + + MQ GL + + +S +CA + L+ G++ H +
Sbjct: 217 SWGSAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHA 276
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEV--SCNTIIVGY-----CEN 173
+N F S+ V +VDVY + + A + F F + N + N ++VG
Sbjct: 277 IKNKFSSDRVVGTAIVDVYAKANSLTDARRAF--FGLPNHTVETSNAMMVGLFMIRSSIR 334
Query: 174 GNVAEARELFDQMEHL-----GVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIE 228
+V +F G Q ++ S++ Y EA+ +F+ + +D +
Sbjct: 335 FDVVSLSGVFSACAETKGYFPGQQVHCLAIKSVLDLYGKCKALMEAYLIFQGMKQKDSVS 394
Query: 229 PTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMA 288
+ +IA + N +H + L+ D FV +V+MYC+ + AQ
Sbjct: 395 ------WNAIIAALEQNGHYDDTILHFNEM---LRFDAFVASTVVDMYCKCGIIDEAQKL 445
Query: 289 FDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATM 348
D I + + GF N + A + FSEML + L PD +T +L C++LAT+
Sbjct: 446 HDRIGGQQVVSWNAILSGFSLNKESEAAQKFFSEMLDMGLKPDHFTFATVLDTCANLATI 505
Query: 349 ERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAY 408
E GKQ+H I+ D +I + LVDMYAKCG + + L ++++ D VS NAM+ Y
Sbjct: 506 ELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGY 565
Query: 409 AMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPS 467
A+HG G E + F R+ P+H +F++ L AC H G G +F LM +Y ++P
Sbjct: 566 ALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQ 625
Query: 468 LKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLI 527
L+H+ CMVD+L R+ EA +FI +P D+V+W LL C ++E ++AA ++
Sbjct: 626 LEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEIAELAASNVL 685
Query: 528 ELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASD 587
L+P+++ Y++L+N++A +G+W+D++RTR+ +K R+ K PGCSWIE + E+H F D
Sbjct: 686 LLDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWIEAQSEMHGFLVGD 745
Query: 588 RSHDRSEEIYTIID 601
++H RS E+Y +++
Sbjct: 746 KAHPRSGELYEMLN 759
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 140/565 (24%), Positives = 242/565 (42%), Gaps = 107/565 (18%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +C A++VF MP RD VSWN+++TA + G + A+ + M P++V
Sbjct: 61 MYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPD-----PDVV 115
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A++ G+ Q G +E++ + M G+ P+ T + +L +C+ L++LSLG + H
Sbjct: 116 SWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALA 175
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G + + LVD+Y +C + AL F +N VS + I G +N
Sbjct: 176 VKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGSAIAGCVQNEQYVRGL 235
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
ELF +M+ LG+ G+ S + S +
Sbjct: 236 ELFIEMQRLGL----------------------------------GVSQPS--YASAFRS 259
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA M+ L G+++HA AI SD VG A+V++Y + L A+ AF + N
Sbjct: 260 CAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPN------ 313
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
V T NAM + M+ + D+ ++ + SAC+ G+QVH AI+
Sbjct: 314 --------HTVETSNAMMVGLFMIRSSIRFDVVSLSGVFSACAETKGYFPGQQVHCLAIK 365
Query: 361 CGYD---------------------------------------------------SDVHI 369
D D +
Sbjct: 366 SVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFDAFV 425
Query: 370 GTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGF 429
+ +VDMY KCG + A+ + RI +VS NA+L+ ++++ + F +L G
Sbjct: 426 ASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEAAQKFFSEMLDMGL 485
Query: 430 RPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYE 489
+PDH +F + L C + +I+ G + + ++ + +VD+ ++ G++ ++
Sbjct: 486 KPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLL 545
Query: 490 FIKKIPMAPDSVMWGALLGGCVSHG 514
+K+ D V W A++ G HG
Sbjct: 546 VFEKVE-KRDFVSWNAMICGYALHG 569
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 120/436 (27%), Positives = 201/436 (46%), Gaps = 33/436 (7%)
Query: 84 RMQAEGLEPNARTLSSVLPACARL--QKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRR 141
+ Q + P T S V +CA+ + L+ G+ H + +GF+ FV N L+ +Y R
Sbjct: 5 QQQPPPVAPARVTFSRVFQSCAQAGREALAAGRAAHARMVVSGFVPTAFVSNCLLQMYAR 64
Query: 142 CGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSM 201
C A ++F ++ VS NT++ Y G+++ A LFD M ++SWN++
Sbjct: 65 CAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMP----DPDVVSWNAL 120
Query: 202 ISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALG 261
+SGY ++ E+ +F + + R G+ P TF +L +C+ + L G ++HALA+ G
Sbjct: 121 VSGYCQRGMFQESVDLFVE-MARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTG 179
Query: 262 LQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFS 321
L+ D G ALV+MY + + L A F + + G N ++LF
Sbjct: 180 LEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGSAIAGCVQNEQYVRGLELFI 239
Query: 322 EMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCG 381
EM L L + +C++++ + G+Q+HA+AI+ + SD +GTA+VD+YAK
Sbjct: 240 EMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKAN 299
Query: 382 SLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALS 441
SL AR A+ + + + NAM+ M + S R D +S S
Sbjct: 300 SLTDARRAFFGLPNHTVETSNAMMVGLFM--------------IRSSIRFDVVSLSGVFS 345
Query: 442 ACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSV 501
AC G + L ++DL + L EAY + + DSV
Sbjct: 346 ACAETKGYFPGQQVHCLA-----------IKSVLDLYGKCKALMEAYLIFQGMKQK-DSV 393
Query: 502 MWGALLGGCVSHGNLE 517
W A++ +G+ +
Sbjct: 394 SWNAIIAALEQNGHYD 409
>gi|108707831|gb|ABF95626.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586055|gb|EAZ26719.1| hypothetical protein OsJ_10627 [Oryza sativa Japonica Group]
Length = 798
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 188/605 (31%), Positives = 316/605 (52%), Gaps = 34/605 (5%)
Query: 3 GKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSW 62
+ G+++ A+ F+ MP R S+N+++ N L AL RM S D L S+
Sbjct: 28 ARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRD-----LASY 82
Query: 63 SAVIGGFT---QNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
+A+I G + Q D A + + P+ + +S+L R L+
Sbjct: 83 NALISGLSLRRQTLPDAAAA-----LASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQ 137
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ +S ++ GL+D G + A ++F + ++ V+ ++ GYC+ G + EA
Sbjct: 138 MPERNHVSYTVLLGGLLD----AGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEA 193
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
R LFD+M +R ++SW +MISGY N + A +F + R+ + T+ G +
Sbjct: 194 RALFDEMP----KRNVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAMLVGYIQA 249
Query: 240 A-CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
D L H +A A++ + + + AA+ F+++ ++
Sbjct: 250 GHVEDAAELFNAMPEHPVAAC----------NAMMVGFGQRGMVDAAKTVFEKMCERDDG 299
Query: 299 LGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYA 358
+E N + A+ F EML + P+ +V IL+ C++LA ++ G++VHA
Sbjct: 300 TWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAM 359
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGI 418
+RC +D DV +AL+ MY KCG+L A+ + D+V N+M+T YA HG G++ +
Sbjct: 360 LRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQAL 419
Query: 419 AHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDL 477
F + +G PD I+++ AL+AC + G +K G E F+ M ++P +HY+CMVDL
Sbjct: 420 GIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDL 479
Query: 478 LSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNY 537
L R+G + EA++ IK +P+ PD+V+WGAL+G C H N E + AA +L+ELEP N G Y
Sbjct: 480 LGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIAEFAAKKLLELEPGNAGPY 539
Query: 538 VMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASD-RSHDRSEEI 596
V+L++++ GRW D ++ R+ + R ++KSPGCSWIE +H F + D +H I
Sbjct: 540 VLLSHIYTSVGRWEDASKMRKFISSRNLNKSPGCSWIEYDKRVHLFTSGDVLAHPEHAAI 599
Query: 597 YTIID 601
I++
Sbjct: 600 LRILE 604
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 106/422 (25%), Positives = 198/422 (46%), Gaps = 22/422 (5%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y + G L DA ++F+ MPER+ VS+ ++ G V EA + M D +V+
Sbjct: 122 YVRHGLLADAIRLFQQMPERNHVSYTVLLGGLLDAGRVNEARRLFDEMPDRD-----VVA 176
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W+A++ G+ Q G EA + M N + ++++ A+ +++L ++ +
Sbjct: 177 WTAMLSGYCQAGRITEARALFDEMPKR----NVVSWTAMISGYAQNGEVNLARKLFEVMP 232
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
+S ++ G Y + G + A ++F+ +CN ++VG+ + G V A+
Sbjct: 233 ERNEVSWTAMLVG----YIQAGHVEDAAELFNAMPEHPVAACNAMMVGFGQRGMVDAAKT 288
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
+F++M +R +W++MI Y N EA S FR++L R G+ P + S+L C
Sbjct: 289 VFEKM----CERDDGTWSAMIKAYEQNEFLMEALSTFREMLWR-GVRPNYPSVISILTVC 343
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK 301
A + L G+E+HA + D F AL+ MY + +L A+ F E + ++
Sbjct: 344 AALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWN 403
Query: 302 MKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV-HAYAIR 360
G+ + A+ +F +M ++PD T L+ACS ++ G+++ ++ +
Sbjct: 404 SMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVN 463
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST-PDLVSQNAMLTAYAMHGHGKEGIA 419
+ +VD+ + G ++ A K + PD V A++ A MH + + IA
Sbjct: 464 SSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAE--IA 521
Query: 420 HF 421
F
Sbjct: 522 EF 523
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 78/190 (41%), Gaps = 42/190 (22%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG+LD AK+VF +D V WNS++T
Sbjct: 377 MYIKCGNLDKAKRVFHTFEPKDIVMWNSMIT----------------------------- 407
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
G+ Q+G E+A+G+ M+ G+ P+ T L AC+ K+ G+E +
Sbjct: 408 -------GYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSM 460
Query: 121 TRN-GFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYC---ENGNV 176
T N + +VD+ R G + A + ++ + ++G C N +
Sbjct: 461 TVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEI 520
Query: 177 AE--ARELFD 184
AE A++L +
Sbjct: 521 AEFAAKKLLE 530
>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Glycine max]
Length = 780
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 178/559 (31%), Positives = 298/559 (53%), Gaps = 64/559 (11%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
++VSW+ ++ + +N E+++ + +M+ G PN T+S+ L +C L+ +GK H
Sbjct: 169 DMVSWTGMVACYAENYCHEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKVGKSVH 228
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
G + + + +V L+++Y + +G +A
Sbjct: 229 GCALKVCYDRDLYVGIALLELYTK-------------------------------SGEIA 257
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
EA++ F++M + +I W+ MIS Y + EA +F + + P +FTF SV
Sbjct: 258 EAQQFFEEMP----KDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASV 313
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
L ACA + L G +IH+ + +GL S+ FV AL+++Y + EIEN
Sbjct: 314 LQACASLVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAK----------CGEIENSVK 363
Query: 298 LLGKMKEDGFEPNVYTWN--------------AMQLFSEMLSLDLTPDIYTVGIILSACS 343
L E N WN A+ LFS ML LD+ P T +L A +
Sbjct: 364 LF----TGSTEKNEVAWNTIIVGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRASA 419
Query: 344 SLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNA 403
SL +E G+Q+H+ I+ Y+ D + +L+DMYAKCG + ARL + ++ D VS NA
Sbjct: 420 SLVALEPGRQIHSLTIKTMYNKDSVVANSLIDMYAKCGRIDDARLTFDKMDKQDEVSWNA 479
Query: 404 MLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTG-SEFFDLMAYY 462
++ Y++HG G E + F + S +P+ ++F+ LSAC +AG + G + F ++ Y
Sbjct: 480 LICGYSIHGLGMEALNLFDMMQQSNSKPNKLTFVGVLSACSNAGLLDKGRAHFKSMLQDY 539
Query: 463 DVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIA 522
++P ++HYTCMV LL R+G+ EA + I +IP P ++W ALLG CV H NL+ G++
Sbjct: 540 GIEPCIEHYTCMVWLLGRSGQFDEAVKLIGEIPFQPSVMVWRALLGACVIHKNLDLGKVC 599
Query: 523 ADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHK 582
A R++E+EP + +V+L+N++A A RW ++A R+ MK +++ K PG SW+E++ +H
Sbjct: 600 AQRVLEMEPQDDATHVLLSNMYATAKRWDNVAYVRKNMKKKKVKKEPGLSWVENQGVVHY 659
Query: 583 FRASDRSHDRSEEIYTIID 601
F D SH + I+ +++
Sbjct: 660 FTVGDTSHPNIKLIFAMLE 678
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 116/472 (24%), Positives = 214/472 (45%), Gaps = 40/472 (8%)
Query: 46 LERMSSLDNETP--NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPA 103
LE S L +E P N VS+ + GF+++ + A +L R+ EG E N +++L
Sbjct: 54 LEDASKLFDEMPLTNTVSFVTLAQGFSRSHQFQRARRLLLRLFREGYEVNQFVFTTLLKL 113
Query: 104 CARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSC 163
+ H Y+ + G ++ FV L+D Y CG++ +A ++F K+ VS
Sbjct: 114 LVSMDLADTCLSVHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSW 173
Query: 164 NTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLM 223
++ Y EN ++ LF QM I GY
Sbjct: 174 TGMVACYAENYCHEDSLLLFCQMR--------------IMGY------------------ 201
Query: 224 RDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLV 283
P +FT + L +C + + + GK +H A+ + D +VG AL+E+Y + ++
Sbjct: 202 ----RPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGIALLELYTKSGEIA 257
Query: 284 AAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEM-LSLDLTPDIYTVGIILSAC 342
AQ F+E+ + + + + + + A++LF M S + P+ +T +L AC
Sbjct: 258 EAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQAC 317
Query: 343 SSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQN 402
+SL + G Q+H+ ++ G DS+V + AL+D+YAKCG ++++ + + + V+ N
Sbjct: 318 ASLVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCGEIENSVKLFTGSTEKNEVAWN 377
Query: 403 AMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYY 462
++ Y G G++ + F +L +P +++ S L A +++ G + L
Sbjct: 378 TIIVGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRASASLVALEPGRQIHSLTIKT 437
Query: 463 DVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
++D+ ++ G + +A K+ D V W AL+ G HG
Sbjct: 438 MYNKDSVVANSLIDMYAKCGRIDDARLTFDKMD-KQDEVSWNALICGYSIHG 488
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 114/414 (27%), Positives = 197/414 (47%), Gaps = 44/414 (10%)
Query: 15 FKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGY 74
K+ +RD +++ +G + EA + E M D L+ WS +I + Q+
Sbjct: 232 LKVCYDRDLYVGIALLELYTKSGEIAEAQQFFEEMPKDD-----LIPWSLMISRYAQSDK 286
Query: 75 DEEAIGMLFRM-QAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVN 133
+EA+ + RM Q+ + PN T +SVL ACA L L+LG + H + + G SN FV N
Sbjct: 287 SKEALELFCRMRQSSVVVPNNFTFASVLQACASLVLLNLGNQIHSCVLKVGLDSNVFVSN 346
Query: 134 GLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQR 193
L+DVY +CG++ +++K+F+ + KNEV+ NTIIVGY + G+ +A LF M L +Q
Sbjct: 347 ALMDVYAKCGEIENSVKLFTGSTEKNEVAWNTIIVGYVQLGDGEKALNLFSNMLGLDIQ- 405
Query: 194 GIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEI 253
PT T+ SVL A A + +L G++I
Sbjct: 406 -----------------------------------PTEVTYSSVLRASASLVALEPGRQI 430
Query: 254 HALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYT 313
H+L I D+ V +L++MY + + A++ FD+++ + + G+ +
Sbjct: 431 HSLTIKTMYNKDSVVANSLIDMYAKCGRIDDARLTFDKMDKQDEVSWNALICGYSIHGLG 490
Query: 314 WNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR-CGYDSDVHIGTA 372
A+ LF M + P+ T +LSACS+ +++G+ ++ G + + T
Sbjct: 491 MEALNLFDMMQQSNSKPNKLTFVGVLSACSNAGLLDKGRAHFKSMLQDYGIEPCIEHYTC 550
Query: 373 LVDMYAKCGSLKHA-RLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRIL 425
+V + + G A +L + P ++ A+L A +H + G +R+L
Sbjct: 551 MVWLLGRSGQFDEAVKLIGEIPFQPSVMVWRALLGACVIHKNLDLGKVCAQRVL 604
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 165/355 (46%), Gaps = 7/355 (1%)
Query: 164 NTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLM 223
N ++ Y G + +A +LFD+M +S+ ++ G+ + + + L
Sbjct: 42 NILLNTYVHFGFLEDASKLFDEMP----LTNTVSFVTLAQGFSRSHQF-QRARRLLLRLF 96
Query: 224 RDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLV 283
R+G E F F ++L M+ +HA LG Q+D FVG AL++ Y ++
Sbjct: 97 REGYEVNQFVFTTLLKLLVSMDLADTCLSVHAYVYKLGHQADAFVGTALIDAYSVCGNVD 156
Query: 284 AAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACS 343
AA+ FD I + + + N +++ LF +M + P+ +T+ L +C+
Sbjct: 157 AARQVFDGIYFKDMVSWTGMVACYAENYCHEDSLLLFCQMRIMGYRPNNFTISAALKSCN 216
Query: 344 SLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNA 403
L + GK VH A++ YD D+++G AL+++Y K G + A+ ++ + DL+ +
Sbjct: 217 GLEAFKVGKSVHGCALKVCYDRDLYVGIALLELYTKSGEIAEAQQFFEEMPKDDLIPWSL 276
Query: 404 MLTAYAMHGHGKEGIAHFRRILASG-FRPDHISFLSALSACVHAGSIKTGSEFFDLMAYY 462
M++ YA KE + F R+ S P++ +F S L AC + G++ +
Sbjct: 277 MISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQACASLVLLNLGNQIHSCVLKV 336
Query: 463 DVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
+ ++ ++D+ ++ GE+ + + + V W ++ G V G+ E
Sbjct: 337 GLDSNVFVSNALMDVYAKCGEIENSVKLFTG-STEKNEVAWNTIIVGYVQLGDGE 390
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 104/229 (45%), Gaps = 36/229 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KCG ++++ K+F E++ V+WN+++
Sbjct: 351 VYAKCGEIENSVKLFTGSTEKNEVAWNTIIV----------------------------- 381
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
G+ Q G E+A+ + M ++P T SSVL A A L L G++ H
Sbjct: 382 -------GYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRASASLVALEPGRQIHSLT 434
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ + + V N L+D+Y +CG + A F K ++EVS N +I GY +G EA
Sbjct: 435 IKTMYNKDSVVANSLIDMYAKCGRIDDARLTFDKMDKQDEVSWNALICGYSIHGLGMEAL 494
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEP 229
LFD M+ + +++ ++S + L D+ + F+ +L GIEP
Sbjct: 495 NLFDMMQQSNSKPNKLTFVGVLSACSNAGLLDKGRAHFKSMLQDYGIEP 543
>gi|357483943|ref|XP_003612258.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513593|gb|AES95216.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 907
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 194/603 (32%), Positives = 322/603 (53%), Gaps = 31/603 (5%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y K G DDA+KVF+ MP +D VS+NS++ NG + A++ ERM+ N+VS
Sbjct: 152 YAKKGRFDDAEKVFEKMPVKDLVSYNSMLAGYTQNGKMGLAMKFFERMAE-----RNVVS 206
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W+ ++ GF N +G + + + +PNA + ++L AR K+ ++ +
Sbjct: 207 WNLMVAGFVNNC----DLGSAWELFEKIPDPNAVSWVTMLCGFARHGKIVEARKLFDRMP 262
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
+S N ++ Y + + A+K+F + K+ VS T+I GY G + EARE
Sbjct: 263 CKNVVS----WNAMIAAYVQDLQIDEAVKLFKETPYKDCVSWTTMINGYVRVGKLDEARE 318
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
+++QM + + + + +++SG + N DEA +F L RD I S G
Sbjct: 319 VYNQMPY----KDVAAKTALMSGLIQNGRIDEASQVFSQLNKRDAICWNSMIAGYC---- 370
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVG-GALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
+ G+ AL + + V ++ Y + ++ A F+ + + N++
Sbjct: 371 ------QSGRMSEALNLFRQMPVKNAVSWNTMISGYAQAGEMDRATEIFEAM-GVRNVIS 423
Query: 301 -KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
GF N +A++ M PD T LS+C++LA ++ GKQ+H +
Sbjct: 424 WNSLITGFLQNGLYLDALKSLVLMGQEGKKPDQSTFACSLSSCANLAALQVGKQLHELIL 483
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
+ GY +D+ + AL+ MYAKCG ++ A +K I DL+S N++++ YA++G+ E
Sbjct: 484 KSGYINDLFVSNALIAMYAKCGGVQSAEKVFKDIEGVDLISWNSLISGYALNGYANEAFW 543
Query: 420 HFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLL 478
F ++ + G PD ++F+ LSAC HAG G + F M + ++P +HY+C+VDLL
Sbjct: 544 AFEQMSSEGTVPDEVTFIGMLSACSHAGLTNQGVDLFKCMIEGFAIEPLAEHYSCLVDLL 603
Query: 479 SRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYV 538
R G L EA+ ++ + + ++ +WG+LL C H N+E G+IAA RL+ELEP+N NY+
Sbjct: 604 GRMGRLEEAFNIVRGMKVKANAGLWGSLLAACRVHKNMELGKIAALRLLELEPHNASNYI 663
Query: 539 MLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYT 598
L+N+ A AGRW D+ R R M++RR K PGCSWIE +++I F + D R+E I
Sbjct: 664 TLSNMHAEAGRWEDVERLRVLMRERRAGKLPGCSWIEVQNQIQNFVSDDPGKLRTESIKI 723
Query: 599 IID 601
I++
Sbjct: 724 ILN 726
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/389 (22%), Positives = 173/389 (44%), Gaps = 29/389 (7%)
Query: 128 NPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQME 187
N F N + + G + A ++FS KN + N+++ + +NG V++AR+LFD+M
Sbjct: 16 NVFNQNKKIIYLGKQGKIDEAKRVFSNVIHKNHATYNSMVTVFAKNGRVSDARQLFDKMS 75
Query: 188 HLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSL 247
QR ++SWN+MI+GY+ N++ +EA +F + RD +F++ ++ L
Sbjct: 76 ----QRNLVSWNTMIAGYLHNNMVEEAHKLFDLMAERD-----NFSWALMITCYTRKGML 126
Query: 248 RKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGF 307
K +E+ L + DT A++ Y + A+ F+++ + + G+
Sbjct: 127 EKARELFELVPD---KLDTACWNAMIAGYAKKGRFDDAEKVFEKMPVKDLVSYNSMLAGY 183
Query: 308 EPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDV 367
N AM+ F M ++ V ++ C + E +++ D +
Sbjct: 184 TQNGKMGLAMKFFERMAERNVVSWNLMVAGFVNNCDLGSAWELFEKIP--------DPNA 235
Query: 368 HIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILAS 427
++ +A+ G + AR + R+ ++VS NAM+ AY E + F+
Sbjct: 236 VSWVTMLCGFARHGKIVEARKLFDRMPCKNVVSWNAMIAAYVQDLQIDEAVKLFKETPYK 295
Query: 428 GFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEA 487
D +S+ + ++ V G + E ++ M Y DV T ++ L + G + EA
Sbjct: 296 ----DCVSWTTMINGYVRVGKLDEAREVYNQMPYKDVAAK----TALMSGLIQNGRIDEA 347
Query: 488 YEFIKKIPMAPDSVMWGALLGGCVSHGNL 516
+ ++ D++ W +++ G G +
Sbjct: 348 SQVFSQLN-KRDAICWNSMIAGYCQSGRM 375
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 60/112 (53%), Gaps = 4/112 (3%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG + A+KVFK + D +SWNS+++ A NG EA E+MSS + P+ V
Sbjct: 500 MYAKCGGVQSAEKVFKDIEGVDLISWNSLISGYALNGYANEAFWAFEQMSS-EGTVPDEV 558
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEG--LEPNARTLSSVLPACARLQKL 110
++ ++ + G + + LF+ EG +EP A S ++ R+ +L
Sbjct: 559 TFIGMLSACSHAGLTNQGVD-LFKCMIEGFAIEPLAEHYSCLVDLLGRMGRL 609
>gi|356532944|ref|XP_003535029.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Glycine max]
Length = 813
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 196/598 (32%), Positives = 305/598 (51%), Gaps = 73/598 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG+L A+K+F MP+ D V+W NGL
Sbjct: 257 MYSKCGNLLYARKLFNTMPQTDTVTW---------NGL---------------------- 285
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
I G+ QNG+ +EA + M + G++P++ T +S LP+ L KE H YI
Sbjct: 286 -----IAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYI 340
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R+ + ++ + L+DVY + GD+ A KIF + + + C
Sbjct: 341 VRHRVPFDVYLKSALIDVYFKGGDVEMARKIFQQNILVDVAVCT---------------- 384
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+MISGYV + L +A + FR L+++G+ S T SVL A
Sbjct: 385 -------------------AMISGYVLHGLNIDAINTFR-WLIQEGMVTNSLTMASVLPA 424
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA + +L+ GKE+H + L++ VG A+ +MY + L A F + + +++
Sbjct: 425 CAAVAALKPGKELHCHILKKRLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSDRDSVCW 484
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
F N A+ LF +M D ++ LSA ++L + GK++H Y IR
Sbjct: 485 NSMISSFSQNGKPEIAIDLFRQMGMSGAKFDSVSLSSALSAAANLPALYYGKEMHGYVIR 544
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
+ SD + + L+DMY+KCG+L A + + + VS N+++ AY HG +E +
Sbjct: 545 NAFSSDTFVASTLIDMYSKCGNLALAWCVFNLMDGKNEVSWNSIIAAYGNHGCPRECLDL 604
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLS 479
+ +L +G PDH++FL +SAC HAG + G +F M Y + ++HY CMVDL
Sbjct: 605 YHEMLRAGIHPDHVTFLVIISACGHAGLVDEGIHYFHCMTREYGIGARMEHYACMVDLYG 664
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
RAG + EA++ IK +P PD+ +WG LLG C HGN+E ++A+ L+EL+P N+G YV+
Sbjct: 665 RAGRVHEAFDTIKSMPFTPDAGVWGTLLGACRLHGNVELAKLASRHLLELDPKNSGYYVL 724
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
L+N+ A AG W+ + + R MK++ + K PG SWI+ H F A+D +H S EIY
Sbjct: 725 LSNVHADAGEWASVLKVRSLMKEKGVQKIPGYSWIDVNGGTHMFSAADGNHPESVEIY 782
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 127/514 (24%), Positives = 235/514 (45%), Gaps = 73/514 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y G + DA++VF +P RD + WN
Sbjct: 156 LYADNGYIRDARRVFDELPLRDTILWN--------------------------------- 182
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
++ G+ ++G + AIG M+ N+ T + +L CA G + HG +
Sbjct: 183 ---VMLRGYVKSGDFDNAIGTFCEMRTSYSMVNSVTYTCILSICATRGNFCAGTQLHGLV 239
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+GF +P V N LV +Y +CG++L A K+F+ + V+ N +I GY +NG EA
Sbjct: 240 IGSGFEFDPQVANTLVAMYSKCGNLLYARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAA 299
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LF N+MIS G++P S TF S L +
Sbjct: 300 PLF---------------NAMISA---------------------GVKPDSVTFASFLPS 323
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
+ SLR KE+H+ + + D ++ AL+++Y + D+ A+ F + ++ +
Sbjct: 324 ILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDVYFKGGDVEMARKIFQQNILVDVAVC 383
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G+ + +A+ F ++ + + T+ +L AC+++A ++ GK++H + ++
Sbjct: 384 TAMISGYVLHGLNIDAINTFRWLIQEGMVTNSLTMASVLPACAAVAALKPGKELHCHILK 443
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
++ V++G+A+ DMYAKCG L A ++R+S D V N+M+++++ +G + I
Sbjct: 444 KRLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSDRDSVCWNSMISSFSQNGKPEIAIDL 503
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSR 480
FR++ SG + D +S SALSA + ++ G E + + ++D+ S+
Sbjct: 504 FRQMGMSGAKFDSVSLSSALSAAANLPALYYGKEMHGYVIRNAFSSDTFVASTLIDMYSK 563
Query: 481 AGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
G L A+ + + V W +++ +HG
Sbjct: 564 CGNLALAWCVFNLMD-GKNEVSWNSIIAAYGNHG 596
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 113/458 (24%), Positives = 203/458 (44%), Gaps = 37/458 (8%)
Query: 60 VSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
+ W+ +I G G+ + A+ F+M + P+ T V+ AC L + L H
Sbjct: 78 LPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHDT 137
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
GF + F + L+ +Y +NG + +A
Sbjct: 138 ARSLGFHVDLFAGSALIKLY-------------------------------ADNGYIRDA 166
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
R +FD++ R I WN M+ GYV + +D A F ++ + S T+ +L
Sbjct: 167 RRVFDELP----LRDTILWNVMLRGYVKSGDFDNAIGTFCEMRTSYSMV-NSVTYTCILS 221
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
CA + G ++H L I G + D V LV MY + +L+ A+ F+ + + +
Sbjct: 222 ICATRGNFCAGTQLHGLVIGSGFEFDPQVANTLVAMYSKCGNLLYARKLFNTMPQTDTVT 281
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
G+ N +T A LF+ M+S + PD T L + ++ K+VH+Y +
Sbjct: 282 WNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIV 341
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
R DV++ +AL+D+Y K G ++ AR +++ D+ AM++ Y +HG + I
Sbjct: 342 RHRVPFDVYLKSALIDVYFKGGDVEMARKIFQQNILVDVAVCTAMISGYVLHGLNIDAIN 401
Query: 420 HFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLS 479
FR ++ G + ++ S L AC ++K G E + ++ + + + D+ +
Sbjct: 402 TFRWLIQEGMVTNSLTMASVLPACAAVAALKPGKELHCHILKKRLENIVNVGSAITDMYA 461
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
+ G L AYEF +++ DSV W +++ +G E
Sbjct: 462 KCGRLDLAYEFFRRMS-DRDSVCWNSMISSFSQNGKPE 498
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 164/345 (47%), Gaps = 6/345 (1%)
Query: 170 YCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEP 229
Y G +A LF ++E R + WN MI G +D A +F ++ + P
Sbjct: 56 YVLCGRFRDAGNLFFELE----LRYALPWNWMIRGLYMLGWFDFAL-LFYFKMLGSNVSP 110
Query: 230 TSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAF 289
+TF V+ AC +N++ +H A +LG D F G AL+++Y + A+ F
Sbjct: 111 DKYTFPYVIKACGGLNNVPLCMVVHDTARSLGFHVDLFAGSALIKLYADNGYIRDARRVF 170
Query: 290 DEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATME 349
DE+ + +L + G+ + NA+ F EM + + T ILS C++
Sbjct: 171 DELPLRDTILWNVMLRGYVKSGDFDNAIGTFCEMRTSYSMVNSVTYTCILSICATRGNFC 230
Query: 350 RGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYA 409
G Q+H I G++ D + LV MY+KCG+L +AR + + D V+ N ++ Y
Sbjct: 231 AGTQLHGLVIGSGFEFDPQVANTLVAMYSKCGNLLYARKLFNTMPQTDTVTWNGLIAGYV 290
Query: 410 MHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLK 469
+G E F ++++G +PD ++F S L + + +GS++ E + + V +
Sbjct: 291 QNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVY 350
Query: 470 HYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
+ ++D+ + G++ A + ++ + D + A++ G V HG
Sbjct: 351 LKSALIDVYFKGGDVEMARKIFQQNILV-DVAVCTAMISGYVLHG 394
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 126/284 (44%), Gaps = 11/284 (3%)
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYC---RYQDLVAAQMAFDEI 292
S+ AC+D + +++ +++H I G+ ++ +Y R++D A F E+
Sbjct: 16 SLFRACSDASMVQQARQVHTQVIVGGMGDVCAPSSRVLGLYVLCGRFRD---AGNLFFEL 72
Query: 293 ENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGK 352
E L G + A+ + +ML +++PD YT ++ AC L +
Sbjct: 73 ELRYALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCM 132
Query: 353 QVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHG 412
VH A G+ D+ G+AL+ +YA G ++ AR + + D + N ML Y G
Sbjct: 133 VVHDTARSLGFHVDLFAGSALIKLYADNGYIRDARRVFDELPLRDTILWNVMLRGYVKSG 192
Query: 413 HGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM--AYYDVKPSLKH 470
I F + S + +++ LS C G+ G++ L+ + ++ P + +
Sbjct: 193 DFDNAIGTFCEMRTSYSMVNSVTYTCILSICATRGNFCAGTQLHGLVIGSGFEFDPQVAN 252
Query: 471 YTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
+V + S+ G L A + +P D+V W L+ G V +G
Sbjct: 253 --TLVAMYSKCGNLLYARKLFNTMPQT-DTVTWNGLIAGYVQNG 293
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/180 (19%), Positives = 73/180 (40%), Gaps = 1/180 (0%)
Query: 338 ILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPD 397
+ ACS + +++ +QVH I G + ++ +Y CG + A + +
Sbjct: 17 LFRACSDASMVQQARQVHTQVIVGGMGDVCAPSSRVLGLYVLCGRFRDAGNLFFELELRY 76
Query: 398 LVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFD 457
+ N M+ M G + + ++L S PD +F + AC ++ D
Sbjct: 77 ALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHD 136
Query: 458 LMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
L + ++ L + G + +A ++P+ D+++W +L G V G+ +
Sbjct: 137 TARSLGFHVDLFAGSALIKLYADNGYIRDARRVFDELPLR-DTILWNVMLRGYVKSGDFD 195
>gi|125525521|gb|EAY73635.1| hypothetical protein OsI_01524 [Oryza sativa Indica Group]
Length = 560
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 185/552 (33%), Positives = 285/552 (51%), Gaps = 61/552 (11%)
Query: 51 SLDNETP--NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQ 108
+L +E P ++V+W+A++ G+ NG EA+ + RM A G PN TLSSVL AC
Sbjct: 24 ALFDEMPERDVVAWTAMLSGYASNGLRREALDVFRRMVAAGAAPNEYTLSSVLTACRGPC 83
Query: 109 KLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIV 168
++ H R G P+VVN L+D Y +
Sbjct: 84 APAMAMPLHAVAVRRGVDRMPYVVNALIDSYASLAE------------------------ 119
Query: 169 GYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIE 228
V +AR LFD LG R SW SMI+GY +F+ +L +DG+E
Sbjct: 120 ------GVVDARRLFDA---LGSGRTAASWTSMIAGYARWGQERTGLRLFKTML-KDGVE 169
Query: 229 PTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMA 288
++F L AC + L G+++H I L + V +L++MYC ++ A+
Sbjct: 170 LSTFACSIALHACTLVIDLCLGQQLHLQCIKKALDVNLAVVNSLIDMYCTCARILDARSL 229
Query: 289 FDEIENIENLLGKMKEDGFEPNVYTWNAM----------QLFSEMLSLDLTPDIYTVGII 338
FD E N+ TWN M +L ++ P+ +T+ I
Sbjct: 230 FDGTP--------------ERNLITWNTMIAGYSQCDPLMALQLLLEMNDEPNCFTLTSI 275
Query: 339 LSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDL 398
SAC+ LA + GKQVH +R Y D+ +G ALVDMY+KCGS+ +A+ + R+ D
Sbjct: 276 TSACADLAALRCGKQVHGAVLRRSYSDDLQMGNALVDMYSKCGSITNAKNVFDRMGCKDK 335
Query: 399 VSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFF-D 457
S +M+ Y M+G+G E + F ++ +G PDH+ FLS +S+C HAG + G FF
Sbjct: 336 FSWTSMIAGYGMNGYGNEAVQLFSSMIHAGVHPDHVVFLSLISSCSHAGLVDEGWNFFRS 395
Query: 458 LMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
++ Y+++P+ + Y +V+LL+RAG L EA + I +P APD +WGALLG H N+E
Sbjct: 396 MINEYNLQPNKEVYGSVVNLLARAGRLREALDLIDTMPFAPDEYVWGALLGASKMHNNVE 455
Query: 518 FGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDR 577
G++AA ++ E+ P++ NY+MLA+++A +W + A TR+ ++ K G SWIE
Sbjct: 456 MGRLAARKITEINPDDVKNYIMLASIYAAGSKWGEYAFTRRSLRGIGSRKEAGISWIEVM 515
Query: 578 DEIHKFRASDRS 589
D+++ F A+D S
Sbjct: 516 DKMYSFTAADSS 527
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 155/353 (43%), Gaps = 22/353 (6%)
Query: 164 NTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLM 223
T I C G V AR LFD+M +R +++W +M+SGY N L EA +FR ++
Sbjct: 7 TTFISSLCSRGAVCHARALFDEMP----ERDVVAWTAMLSGYASNGLRREALDVFRRMVA 62
Query: 224 RDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQD-L 282
G P +T SVL AC + +HA+A+ G+ +V AL++ Y + +
Sbjct: 63 A-GAAPNEYTLSSVLTACRGPCAPAMAMPLHAVAVRRGVDRMPYVVNALIDSYASLAEGV 121
Query: 283 VAAQMAFDEI------ENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVG 336
V A+ FD + + +++ G E ++LF ML + +
Sbjct: 122 VDARRLFDALGSGRTAASWTSMIAGYARWGQER-----TGLRLFKTMLKDGVELSTFACS 176
Query: 337 IILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTP 396
I L AC+ + + G+Q+H I+ D ++ + +L+DMY C + AR +
Sbjct: 177 IALHACTLVIDLCLGQQLHLQCIKKALDVNLAVVNSLIDMYCTCARILDARSLFDGTPER 236
Query: 397 DLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFF 456
+L++ N M+ Y+ + + + +L P+ + S SAC +++ G +
Sbjct: 237 NLITWNTMIAGYSQ----CDPLMALQLLLEMNDEPNCFTLTSITSACADLAALRCGKQVH 292
Query: 457 DLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
+ L+ +VD+ S+ G + A ++ D W +++ G
Sbjct: 293 GAVLRRSYSDDLQMGNALVDMYSKCGSITNAKNVFDRMG-CKDKFSWTSMIAG 344
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 2/111 (1%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGS+ +AK VF M +D SW S++ NG EA++ M P+ V
Sbjct: 313 MYSKCGSITNAKNVFDRMGCKDKFSWTSMIAGYGMNGYGNEAVQLFSSMIHAGVH-PDHV 371
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKL 110
+ ++I + G +E M E L+PN SV+ AR +L
Sbjct: 372 VFLSLISSCSHAGLVDEGWNFFRSMINEYNLQPNKEVYGSVVNLLARAGRL 422
>gi|357521373|ref|XP_003630975.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524997|gb|AET05451.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 701
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 171/549 (31%), Positives = 289/549 (52%), Gaps = 34/549 (6%)
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+WS++I +T + + M++ + PN S+L A L+ L H
Sbjct: 77 AWSSIIKCYTSHSLLHLSFSSFNSMRSLSVPPNRHVFPSLLKASTLLKHHKLAHSLHACT 136
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R G S+ ++ N L++ Y + +A K+F F + E + + +
Sbjct: 137 VRLGLDSDLYIANALINTYAK---FHNAGKVFDVFPKRGESGIDCV-------------K 180
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
++FD M R ++SWN++I+G+ N +Y EA M R++ ++P SFT S+L
Sbjct: 181 KVFDMMP----VRDVVSWNTVIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPI 236
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAF------DEIEN 294
A+ + KGKEIH A+ G D F+G +L++MY + L + AF D I
Sbjct: 237 FAEHVDVNKGKEIHGYAVRNGFDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISW 296
Query: 295 IENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV 354
+ G ++ F+ + F ML ++ P + ++ AC+ L + G+Q+
Sbjct: 297 NSIIAGCVQNGEFD------RGLGFFRRMLKENVKPMAVSFSSVIPACAHLTALSLGRQL 350
Query: 355 HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHG 414
H +R G+D + I ++LVDMYAKCG++K AR + RI D+V+ A++ AMHGH
Sbjct: 351 HGCIVRLGFDDNEFIASSLVDMYAKCGNIKMARYVFDRIDKRDMVAWTAIIMGCAMHGHA 410
Query: 415 KEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTC 473
+ ++ F +L G RP +++F++ L+AC HAG + G +F+ M + + P L+HY
Sbjct: 411 LDAVSLFENMLEDGVRPCYVAFMAVLTACSHAGLVDEGWRYFNSMERDFGIAPGLEHYAA 470
Query: 474 MVDLLSRAGELGEAYEFIKKIP-MAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPN 532
+ DLL RAG L EAY+FI + + P +W LL C +H ++E + D+L+ ++
Sbjct: 471 VADLLGRAGRLEEAYDFISNMRGVQPTGSVWSILLAACRAHKSVELAEKVLDKLLSVDSE 530
Query: 533 NTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDR 592
N G YV+++N+++ A RW D AR R M+ + + K+P CSWIE +++H F A D+SH
Sbjct: 531 NMGAYVLMSNIYSAAQRWKDAARLRIHMRKKGLKKTPACSWIEVGNQVHTFMAGDKSHPY 590
Query: 593 SEEIYTIID 601
++I +D
Sbjct: 591 YDKINKALD 599
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 95/344 (27%), Positives = 157/344 (45%), Gaps = 71/344 (20%)
Query: 8 LDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIG 67
+D KKVF MMP RD VSWN+V+ A NG+ +EAL+ + M
Sbjct: 176 IDCVKKVFDMMPVRDVVSWNTVIAGFAQNGMYVEALDMVREMG----------------- 218
Query: 68 GFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMS 127
+NG L+P++ TLSS+LP A ++ GKE HGY RNGF
Sbjct: 219 ---KNG---------------KLKPDSFTLSSILPIFAEHVDVNKGKEIHGYAVRNGFDG 260
Query: 128 NPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQME 187
+ F+ + L+D+Y +C + +L+ F K+ +S N+II G +NG
Sbjct: 261 DVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNSIIAGCVQNGE------------ 308
Query: 188 HLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSL 247
+D FR +L ++ ++P + +F SV+ ACA + +L
Sbjct: 309 -----------------------FDRGLGFFRRML-KENVKPMAVSFSSVIPACAHLTAL 344
Query: 248 RKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGF 307
G+++H + LG + F+ +LV+MY + ++ A+ FD I+ + + G
Sbjct: 345 SLGRQLHGCIVRLGFDDNEFIASSLVDMYAKCGNIKMARYVFDRIDKRDMVAWTAIIMGC 404
Query: 308 EPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG 351
+ + +A+ LF ML + P +L+ACS ++ G
Sbjct: 405 AMHGHALDAVSLFENMLEDGVRPCYVAFMAVLTACSHAGLVDEG 448
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 111/229 (48%), Gaps = 36/229 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC L+ + + F ++P +D +S
Sbjct: 271 MYAKCNRLECSLRAFYILPRKDAIS----------------------------------- 295
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
W+++I G QNG + +G RM E ++P A + SSV+PACA L LSLG++ HG I
Sbjct: 296 -WNSIIAGCVQNGEFDRGLGFFRRMLKENVKPMAVSFSSVIPACAHLTALSLGRQLHGCI 354
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R GF N F+ + LVD+Y +CG++ A +F + ++ V+ II+G +G+ +A
Sbjct: 355 VRLGFDDNEFIASSLVDMYAKCGNIKMARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAV 414
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEP 229
LF+ M GV+ +++ ++++ L DE + F + GI P
Sbjct: 415 SLFENMLEDGVRPCYVAFMAVLTACSHAGLVDEGWRYFNSMERDFGIAP 463
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 57/117 (48%), Gaps = 2/117 (1%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG++ A+ VF + +RD V+W +++ CA +G L+A+ E M D P V
Sbjct: 372 MYAKCGNIKMARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVSLFENMLE-DGVRPCYV 430
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEF 116
++ AV+ + G +E M+ + G+ P ++V R +L +F
Sbjct: 431 AFMAVLTACSHAGLVDEGWRYFNSMERDFGIAPGLEHYAAVADLLGRAGRLEEAYDF 487
>gi|218546768|sp|Q8S9M4.2|PP198_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g41080
Length = 650
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 177/517 (34%), Positives = 279/517 (53%), Gaps = 21/517 (4%)
Query: 93 NARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIF 152
N + + +C Q L GK+ H + +GF S+ F+ N L+ +Y + GD SA+ ++
Sbjct: 43 NTSLFTPFIQSCTTRQSLPSGKQLHCLLVVSGFSSDKFICNHLMSMYSKLGDFPSAVAVY 102
Query: 153 SKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYD 212
+ KN +S N +I GY G++ AR++FD+M R + +WN+MI+G + +
Sbjct: 103 GRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMP----DRKLTTWNAMIAGLIQFEFNE 158
Query: 213 EAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGAL 272
E S+FR++ G P +T GSV A + S+ G++IH I GL+ D V +L
Sbjct: 159 EGLSLFREM-HGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSL 217
Query: 273 VEMYCRYQDLVAAQMAFDEIENIENL-------LGKMKEDGFEPNVYTWNAMQLFSEMLS 325
MY R L ++ + + NL +G + E +Y + M++
Sbjct: 218 AHMYMRNGKLQDGEIVIRSMP-VRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISG---- 272
Query: 326 LDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKH 385
P+ T +LS+CS LA +G+Q+HA AI+ G S V + ++L+ MY+KCG L
Sbjct: 273 --CRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGD 330
Query: 386 ARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRIL-ASGFRPDHISFLSALSACV 444
A A+ D V ++M++AY HG G E I F + + + ++FL+ L AC
Sbjct: 331 AAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACS 390
Query: 445 HAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMW 503
H+G G E FD+M Y KP LKHYTC+VDLL RAG L +A I+ +P+ D V+W
Sbjct: 391 HSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIW 450
Query: 504 GALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDR 563
LL C H N E Q +++++PN++ YV+LAN+ A A RW D++ R+ M+D+
Sbjct: 451 KTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDK 510
Query: 564 RMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTII 600
+ K G SW E + E+H+F+ DRS +S+EIY+ +
Sbjct: 511 NVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYL 547
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 104/429 (24%), Positives = 184/429 (42%), Gaps = 46/429 (10%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G A V+ M +++ +S N ++ G ++ A + + M L
Sbjct: 88 MYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPD-----RKLT 142
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+A+I G Q ++EE + + M G P+ TL SV A L+ +S+G++ HGY
Sbjct: 143 TWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYT 202
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G + V + L +Y R G + + ++N V+ NT+I+G +NG
Sbjct: 203 IKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVL 262
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
L+ M+ IS G P TF +VL +
Sbjct: 263 YLYKMMK--------IS----------------------------GCRPNKITFVTVLSS 286
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C+D+ +G++IHA AI +G S V +L+ MY + L A AF E E+ + ++
Sbjct: 287 CSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMW 346
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGI--ILSACSSLATMERGKQVHAYA 358
+ + A++LF+ M +I V +L ACS ++G ++
Sbjct: 347 SSMISAYGFHGQGDEAIELFNTMAE-QTNMEINEVAFLNLLYACSHSGLKDKGLELFDMM 405
Query: 359 I-RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNAMLTAYAMHGHGKE 416
+ + G+ + T +VD+ + G L A + + D+V +L+A +H + +
Sbjct: 406 VEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEM 465
Query: 417 GIAHFRRIL 425
F+ IL
Sbjct: 466 AQRVFKEIL 474
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 117/240 (48%), Gaps = 4/240 (1%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
NLV+W+ +I G QNG E + + M+ G PN T +VL +C+ L G++ H
Sbjct: 241 NLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIH 300
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
+ G S VV+ L+ +Y +CG + A K FS+ ++EV +++I Y +G
Sbjct: 301 AEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGD 360
Query: 178 EARELFDQM-EHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGS 236
EA ELF+ M E ++ +++ +++ + L D+ +F ++ + G +P +
Sbjct: 361 EAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTC 420
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
V+ L + + A+ ++ +++D + L+ +++ AQ F EI I+
Sbjct: 421 VVDLLGRAGCLDQAE---AIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQID 477
>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
Length = 920
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 188/636 (29%), Positives = 332/636 (52%), Gaps = 75/636 (11%)
Query: 2 YGKCGSLDDAKKVFKMMP----ERDCVSWNSVVTACAANG----------LVLEA----- 42
+ +CG + A ++F M DCV+ S++ ACA+ G +L+A
Sbjct: 220 HAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFD 279
Query: 43 ----------------LECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQ 86
+E + +L + T N+V W+ ++ + Q ++ + +MQ
Sbjct: 280 YITEGSLLDLYVKCGDIETAHDIFNLGDRT-NVVLWNLMLVAYGQISDLAKSFEIFGQMQ 338
Query: 87 AEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDML 146
A G+ PN T +L C ++ LG++ H +NGF S+ +V L+D+Y
Sbjct: 339 ATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMY------- 391
Query: 147 SALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYV 206
SK+ G + +AR++ + +E +R ++SW SMI+GYV
Sbjct: 392 ------SKY------------------GCLDKARKILEMLE----KRDVVSWTSMIAGYV 423
Query: 207 DNSLYDEAFSMFRDLLMRD-GIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSD 265
+ +EA + F++ M+D G+ P + S ACA + ++R+G +IHA G +D
Sbjct: 424 QHDFCEEALATFKE--MQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAAD 481
Query: 266 TFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLS 325
+ LV +Y R A F EIE+ + + GF + A+ +F +M
Sbjct: 482 ISIWNTLVNLYARCGRSEEAFSLFREIEHKDEITWNGLISGFGQSRLYKQALMVFMKMGQ 541
Query: 326 LDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKH 385
+++T +SA ++LA +++GKQVH A++ G+ S+ + AL+ +Y KCGS++
Sbjct: 542 AGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIED 601
Query: 386 ARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVH 445
A++ + +S + VS N ++T+ + HG G E + F ++ G +P+ ++F+ L+AC H
Sbjct: 602 AKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSH 661
Query: 446 AGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWG 504
G ++ G +F M+ Y + P HY C+VD+L RAG+L A F+ ++P+ ++++W
Sbjct: 662 VGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWR 721
Query: 505 ALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRR 564
LL C H N+E G++AA L+ELEP+++ +YV+L+N +A G+W++ + R+ MKDR
Sbjct: 722 TLLSACKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMKDRG 781
Query: 565 MHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTII 600
+ K PG SWIE ++ +H F DR H S++IY +
Sbjct: 782 IRKEPGRSWIEVKNAVHAFFVGDRLHPLSDQIYKFL 817
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 143/554 (25%), Positives = 248/554 (44%), Gaps = 78/554 (14%)
Query: 27 NSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQ 86
N ++ A NGLV +A + + +SS D+ VSW A++ G+ Q+G +EA + +M
Sbjct: 82 NLLIDLYAKNGLVWQARQVFKELSSRDH-----VSWVAMLSGYAQSGLGKEAFRLYSQMH 136
Query: 87 AEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDML 146
+ P LSSVL AC + + + G+ H + + F S FV N L+ +Y G
Sbjct: 137 WTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFK 196
Query: 147 SALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYV 206
A ++F + V+ NT+I G+ + G+ A ++FD+M+
Sbjct: 197 LAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQ------------------- 237
Query: 207 DNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDT 266
G+ P T S+L ACA + L+KGK++H+ + G+ D
Sbjct: 238 -----------------LSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDY 280
Query: 267 FVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAM--------- 317
G+L+++Y + D+ A +I NL G NV WN M
Sbjct: 281 ITEGSLLDLYVKCGDIETAH-------DIFNL-------GDRTNVVLWNLMLVAYGQISD 326
Query: 318 -----QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTA 372
++F +M + + P+ +T IL C+ +E G+Q+H+ +I+ G++SD+++
Sbjct: 327 LAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGV 386
Query: 373 LVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPD 432
L+DMY+K G L AR + + D+VS +M+ Y H +E +A F+ + G PD
Sbjct: 387 LIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPD 446
Query: 433 HISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIK 492
+I SA SAC +++ G + + + + +V+L +R G EA+ +
Sbjct: 447 NIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFR 506
Query: 493 KIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSD 552
+I D + W L+ G FGQ + + G N+F + S
Sbjct: 507 EIEH-KDEITWNGLISG--------FGQSRLYKQALMVFMKMGQAGAKYNVFTFISAISA 557
Query: 553 LARTRQKMKDRRMH 566
LA + +++H
Sbjct: 558 LANLADIKQGKQVH 571
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 118/456 (25%), Positives = 215/456 (47%), Gaps = 39/456 (8%)
Query: 60 VSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
V+++ +I G Q G+ E A+ + MQ GL P+ T++S+L ACA + L GK+ H Y
Sbjct: 211 VTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSY 270
Query: 120 ITRNGFMSNPFVVNG-LVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
+ + G MS ++ G L+D+Y +CGD+ +A IF+ N V N ++V Y + ++A+
Sbjct: 271 LLKAG-MSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAK 329
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
+ E+F QM+ GI P FT+ +L
Sbjct: 330 SFEIFGQMQ------------------------------------ATGIHPNQFTYPCIL 353
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
C + G++IH+L+I G +SD +V G L++MY +Y L A+ + +E + +
Sbjct: 354 RTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVV 413
Query: 299 LGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYA 358
G+ + + A+ F EM + PD + SAC+ + M +G Q+HA
Sbjct: 414 SWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARV 473
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGI 418
GY +D+ I LV++YA+CG + A ++ I D ++ N +++ + K+ +
Sbjct: 474 YVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIEHKDEITWNGLISGFGQSRLYKQAL 533
Query: 419 AHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLL 478
F ++ +G + + +F+SA+SA + IK G + + ++ L
Sbjct: 534 MVFMKMGQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLY 593
Query: 479 SRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
+ G + +A ++ + + V W ++ C HG
Sbjct: 594 GKCGSIEDAKMIFSEMSLR-NEVSWNTIITSCSQHG 628
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 145/314 (46%), Gaps = 21/314 (6%)
Query: 234 FGSVLIACADMNSLRKGK------EIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQM 287
GS + CA +G EIHA ++ GL +D +G L+++Y + + A+
Sbjct: 40 LGSADLTCALQACRGRGNRWPLVLEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQ 99
Query: 288 AFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLAT 347
F E+ + +++ G+ + A +L+S+M + P Y + +LSAC+
Sbjct: 100 VFKELSSRDHVSWVAMLSGYAQSGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKL 159
Query: 348 MERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTA 407
+G+ +HA + + S+ +G AL+ +Y GS K A + + D V+ N +++
Sbjct: 160 FAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISG 219
Query: 408 YAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPS 467
+A GHG+ + F + SG RPD ++ S L+AC G ++ G + + +
Sbjct: 220 HAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFD 279
Query: 468 LKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE--------FG 519
++DL + G++ A++ I + + V+W +L V++G + FG
Sbjct: 280 YITEGSLLDLYVKCGDIETAHD-IFNLGDRTNVVLWNLML---VAYGQISDLAKSFEIFG 335
Query: 520 QIAADRLIELEPNN 533
Q+ A + PN
Sbjct: 336 QMQA---TGIHPNQ 346
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 122/303 (40%), Gaps = 65/303 (21%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSS--------- 51
MY K G LD A+K+ +M+ +RD VSW S++ + EAL + M
Sbjct: 390 MYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIG 449
Query: 52 -------------------------LDNETPNLVSWSAVIGGFTQNGYDEEAIGM----- 81
+ ++ W+ ++ + + G EEA +
Sbjct: 450 LASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIE 509
Query: 82 --------------------------LFRMQAEGLEPNARTLSSVLPACARLQKLSLGKE 115
+M G + N T S + A A L + GK+
Sbjct: 510 HKDEITWNGLISGFGQSRLYKQALMVFMKMGQAGAKYNVFTFISAISALANLADIKQGKQ 569
Query: 116 FHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGN 175
HG + G S V N L+ +Y +CG + A IFS+ S++NEVS NTII ++G
Sbjct: 570 VHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGR 629
Query: 176 VAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFG 235
EA +LFDQM+ G++ +++ +++ L +E S F+ + G+ P +
Sbjct: 630 GLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYA 689
Query: 236 SVL 238
V+
Sbjct: 690 CVV 692
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 63/117 (53%), Gaps = 2/117 (1%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+YGKCGS++DAK +F M R+ VSWN+++T+C+ +G LEAL+ ++M + PN V
Sbjct: 592 LYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQ-EGLKPNDV 650
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRM-QAEGLEPNARTLSSVLPACARLQKLSLGKEF 116
++ V+ + G EE + M GL P + V+ R +L + F
Sbjct: 651 TFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRF 707
>gi|357518009|ref|XP_003629293.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355523315|gb|AET03769.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 672
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 200/639 (31%), Positives = 334/639 (52%), Gaps = 70/639 (10%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALEC--------------- 45
+Y + GSL DA K+F MP+ + SWN+++ A G ++LE
Sbjct: 39 LYSRRGSLHDASKLFDEMPQPNPFSWNTLIEAHINLGHRNKSLELFHAMPHKTHYSWNLI 98
Query: 46 ---------LERMSSLDNETP--NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEP-- 92
L++ +L N P N + W+++I G++++GY ++ + M + LE
Sbjct: 99 VSTLSKSGDLQQAQALFNAMPMKNPLVWNSMIHGYSRHGYPRNSLLLFKEMNLDPLETVH 158
Query: 93 -NARTLSSVLPACARLQKLSLGKEFHGYITRNG--FMSNPFVVNGLVDVYRRCGDMLSAL 149
+A LS+V ACA L L GK+ H + +G F + + + +V+ Y +CGD+ SA
Sbjct: 159 RDAFVLSTVFGACADLFALDCGKQVHARVFIDGFEFEQDKVLCSSIVNFYGKCGDLDSAA 218
Query: 150 KIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNS 209
++ ++ S + ++ GY G +++AR++FD V + WNS+ISGYV N
Sbjct: 219 RVVGFVKEVDDFSLSALVSGYANAGRMSDARKVFDN----KVDPCSVLWNSIISGYVSNG 274
Query: 210 LYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVG 269
EA ++F + R+G+ ++L + + ++ K++H A +G D V
Sbjct: 275 EEMEALALFNK-MRRNGVWGDFSAVANILSISSSLLNVELVKQMHDHAFKIGATHDIVVA 333
Query: 270 GALVEMYCRYQDLVAAQMAFDEIENIENLL-----------GKMKEDGFE-----PN--V 311
L++ Y + Q + F E++ + +L G++ ED E PN +
Sbjct: 334 STLLDAYSKCQHPHDSCKLFHELKVYDAILLNTMITVYCNCGRV-EDAKEVFNSMPNKTL 392
Query: 312 YTWN--------------AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAY 357
+WN A+ FS M LD+ D ++ ++SAC+ +++E G+Q+
Sbjct: 393 ISWNSILVGLTQNACPSEALDTFSMMNKLDVKMDKFSFASVISACAIKSSLELGEQLFGK 452
Query: 358 AIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEG 417
AI G +SD I T+LVD Y KCG ++ R + + D VS N ML YA +G+G E
Sbjct: 453 AITLGLESDQIICTSLVDFYCKCGLVEMGRKVFDGMIKTDEVSWNTMLMGYATNGYGIEA 512
Query: 418 IAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVD 476
+ F + SG RP I+F LSAC H G ++ G + F M + YD+ P ++HY+CMVD
Sbjct: 513 LTLFNEMGYSGVRPSAITFTGILSACDHCGLVEEGRDLFRTMKHDYDINPGIEHYSCMVD 572
Query: 477 LLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGN 536
L +R G GEA I+++P D+ MW ++L GCVSHGN G++AA+++I+L+P N+G
Sbjct: 573 LFARVGCFGEAMYLIEEMPFQADANMWLSVLRGCVSHGNKTIGKMAAEKIIQLDPGNSGA 632
Query: 537 YVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIE 575
Y+ L+N+ A + W A R+ M+++ + K PGCSW++
Sbjct: 633 YIQLSNILATSEDWEGSAEVRELMRNKNVQKIPGCSWMD 671
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 107/496 (21%), Positives = 193/496 (38%), Gaps = 95/496 (19%)
Query: 113 GKEFHGYITRNGFM-SNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYC 171
++ H + + G + S+ N L+ +Y R G + A K+F + N S NT+I +
Sbjct: 13 ARQLHLSLLKTGNLHSSVITTNRLLQLYSRRGSLHDASKLFDEMPQPNPFSWNTLIEAHI 72
Query: 172 ENGNVAEARELFDQMEHLG---------------------------VQRGIISWNSMISG 204
G+ ++ ELF M H + + WNSMI G
Sbjct: 73 NLGHRNKSLELFHAMPHKTHYSWNLIVSTLSKSGDLQQAQALFNAMPMKNPLVWNSMIHG 132
Query: 205 YVDNSLYDEAFSMFRDLLMR--DGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALG- 261
Y + + +F+++ + + + +F +V ACAD+ +L GK++HA G
Sbjct: 133 YSRHGYPRNSLLLFKEMNLDPLETVHRDAFVLSTVFGACADLFALDCGKQVHARVFIDGF 192
Query: 262 -LQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL-----------LGKMK------ 303
+ D + ++V Y + DL +A ++ +++ G+M
Sbjct: 193 EFEQDKVLCSSIVNFYGKCGDLDSAARVVGFVKEVDDFSLSALVSGYANAGRMSDARKVF 252
Query: 304 EDGFEPNVYTWN--------------AMQLFSEMLSLDLTPDIYTVGIILSACSSLATME 349
++ +P WN A+ LF++M + D V ILS SSL +E
Sbjct: 253 DNKVDPCSVLWNSIISGYVSNGEEMEALALFNKMRRNGVWGDFSAVANILSISSSLLNVE 312
Query: 350 RGKQVHAYAIRCGYDSDVHIGTALVDMYAK------------------------------ 379
KQ+H +A + G D+ + + L+D Y+K
Sbjct: 313 LVKQMHDHAFKIGATHDIVVASTLLDAYSKCQHPHDSCKLFHELKVYDAILLNTMITVYC 372
Query: 380 -CGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLS 438
CG ++ A+ + + L+S N++L + E + F + + D SF S
Sbjct: 373 NCGRVEDAKEVFNSMPNKTLISWNSILVGLTQNACPSEALDTFSMMNKLDVKMDKFSFAS 432
Query: 439 ALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAP 498
+SAC S++ G + F ++ T +VD + G L E + +
Sbjct: 433 VISACAIKSSLELGEQLFGKAITLGLESDQIICTSLVDFYCKCG-LVEMGRKVFDGMIKT 491
Query: 499 DSVMWGALLGGCVSHG 514
D V W +L G ++G
Sbjct: 492 DEVSWNTMLMGYATNG 507
>gi|449451271|ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 623
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 177/527 (33%), Positives = 280/527 (53%), Gaps = 37/527 (7%)
Query: 77 EAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLV 136
+A+ + +M G PNA T L +CA L LG +FHG IT+ G + PFV GL+
Sbjct: 32 QALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQITKVGCVFEPFVQTGLI 91
Query: 137 DVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGII 196
+Y C+ V AR++F++ H ++ +
Sbjct: 92 SMY-------------------------------CKGSLVDNARKVFEENFH--SRKLTV 118
Query: 197 SWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHAL 256
+N+++SGYV NS EA +FR + +G+ S T ++ AC +L G +H
Sbjct: 119 CYNALVSGYVSNSKCSEAVLLFRQM-NEEGVPVNSVTLLGLIPACVSPINLELGSSLHCS 177
Query: 257 AIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG-KMKEDGFEPNVYTWN 315
+ G SD V + MY + + AQ FDE+ ++ L+ G+ N N
Sbjct: 178 TLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEMP-VKGLISWNAMVSGYAQNGLATN 236
Query: 316 AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVD 375
++L+ M + PD T+ +LS+C++L G +V G+ S+ + AL++
Sbjct: 237 VLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALIN 296
Query: 376 MYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHIS 435
MYA+CG+L A+ + + LVS A++ Y MHGHG+ + F+ ++ SG PD +
Sbjct: 297 MYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTA 356
Query: 436 FLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKI 494
F+ LSAC HAG G E+F +M Y ++P +HY+CMVDLL RAG L EA I+ +
Sbjct: 357 FVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESM 416
Query: 495 PMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLA 554
P+ PD +WGALLG C H N+E ++A +R+IELEP N G YV+L+N+++ A +
Sbjct: 417 PIKPDGAVWGALLGACKIHKNVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVL 476
Query: 555 RTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
R R MK++++ K PGCS++E + +H F DR+H +S+EIY +++
Sbjct: 477 RIRIMMKEKKLKKDPGCSYVELKGRVHPFIVGDRNHLQSDEIYRVLE 523
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 102/382 (26%), Positives = 178/382 (46%), Gaps = 18/382 (4%)
Query: 198 WNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALA 257
WN+ + + +A S++ +L R G P +FTF L +CA ++ G + H
Sbjct: 17 WNTQLRELAKRCQFLQALSLYPQML-RHGDRPNAFTFPFALKSCAALSLPILGSQFHGQI 75
Query: 258 IALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKE--DGFEPNVYTWN 315
+G + FV L+ MYC+ + A+ F+E + L G+ N
Sbjct: 76 TKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSE 135
Query: 316 AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVD 375
A+ LF +M + + T+ ++ AC S +E G +H ++ G+DSDV + +
Sbjct: 136 AVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFIT 195
Query: 376 MYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHIS 435
MY KCGS+ +A+ + + L+S NAM++ YA +G + +R + +G PD ++
Sbjct: 196 MYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVT 255
Query: 436 FLSALSACVHAGSIKTGSEF-FDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKK 493
+ LS+C + G+ G E F + A + P L + ++++ +R G L +A
Sbjct: 256 LVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNN--ALINMYARCGNLTKAQAVFDG 313
Query: 494 IPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIEL-----EPNNTGNYVMLANLFAYAG 548
+P V W A++GG HG+ G+IA E+ EP+ T +V + + ++AG
Sbjct: 314 MP-ERTLVSWTAIIGGYGMHGH---GEIAVQLFKEMIRSGIEPDGTA-FVCVLSACSHAG 368
Query: 549 RWSDLARTRQKMKDRRMHKSPG 570
+D KM R PG
Sbjct: 369 -LTDQGLEYFKMMKRNYQLEPG 389
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 99/387 (25%), Positives = 167/387 (43%), Gaps = 46/387 (11%)
Query: 60 VSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
V ++A++ G+ N EA+ + +M EG+ N+ TL ++PAC L LG H
Sbjct: 118 VCYNALVSGYVSNSKCSEAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCS 177
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ GF S+ VVN + +Y +CG + A K+F + +K +S N ++ GY +NG
Sbjct: 178 TLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNV 237
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
EL+ M+ +G+ P T VL
Sbjct: 238 LELYRNMD------------------------------------MNGVHPDPVTLVGVLS 261
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
+CA++ + G E+ A G S+ F+ AL+ MY R +L AQ FD + +
Sbjct: 262 SCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVS 321
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
G+ + + A+QLF EM+ + PD +LSACS ++G +
Sbjct: 322 WTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMK 381
Query: 360 RCGYDSDVHIG----TALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNAMLTAYAMHGHG 414
R + + G + +VD+ + G LK A+ + + PD A+L A +H +
Sbjct: 382 R---NYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHKNV 438
Query: 415 KEGIAHFRRILASGFRPDHISFLSALS 441
+ F R++ P++I + LS
Sbjct: 439 ELAELAFERVIE--LEPENIGYYVLLS 463
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 134/296 (45%), Gaps = 39/296 (13%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGS++ A+K+F MP + L+
Sbjct: 196 MYMKCGSVNYAQKLFDEMPVK------------------------------------GLI 219
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A++ G+ QNG + + M G+ P+ TL VL +CA L S+G E I
Sbjct: 220 SWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKI 279
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+GF SNPF+ N L+++Y RCG++ A +F + VS II GY +G+ A
Sbjct: 280 QASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAV 339
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+LF +M G++ ++ ++S L D+ F+ + +EP + ++
Sbjct: 340 QLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDL 399
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
L KE L ++ ++ D V GAL+ ++++ A++AF+ + +E
Sbjct: 400 LGRAGRL---KEAQTLIESMPIKPDGAVWGALLGACKIHKNVELAELAFERVIELE 452
>gi|115464255|ref|NP_001055727.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|53749358|gb|AAU90217.1| unknow protein [Oryza sativa Japonica Group]
gi|113579278|dbj|BAF17641.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|222631826|gb|EEE63958.1| hypothetical protein OsJ_18783 [Oryza sativa Japonica Group]
Length = 874
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 191/614 (31%), Positives = 312/614 (50%), Gaps = 107/614 (17%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG ++DAK VF M RD VSWN+++ N LEAL+ L +E+
Sbjct: 245 MYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQ-------LFHES---- 293
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
A +G TQ+ Y ++V+ CA L++L+L ++ H +
Sbjct: 294 --RATMGKMTQSTY-----------------------ATVIKLCANLKQLALARQLHSCV 328
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFS-IKNEVSCNTIIVGYCENGNVAEA 179
++GF V+ L D Y +CG++ AL IFS + +N VS II G +NG++ A
Sbjct: 329 LKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLA 388
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
LF +M D + P FT+ ++L
Sbjct: 389 VVLFSRMR------------------------------------EDRVMPNEFTYSAMLK 412
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
A + +IHA I Q FVG AL+ Y ++ A F IE
Sbjct: 413 ASLSILP----PQIHAQVIKTNYQHIPFVGTALLASYSKFGSTEDALSIFKMIE------ 462
Query: 300 GKMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACS-S 344
+ +V W+AM LF++M + P+ +T+ ++ AC+
Sbjct: 463 --------QKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACP 514
Query: 345 LATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAM 404
A +++G+Q HA +I+ Y + + +ALV MY++ G++ A++ ++R + DLVS N+M
Sbjct: 515 SAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSM 574
Query: 405 LTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YD 463
++ YA HG+ + I FR++ ASG + D ++FL+ + C H G + G ++FD M +
Sbjct: 575 ISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHK 634
Query: 464 VKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAA 523
+ P+++HY CMVDL SRAG+L E I+ +P +++W LLG C H N+E G+ +A
Sbjct: 635 INPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGACRVHKNVELGKFSA 694
Query: 524 DRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKF 583
D+L+ LEP+++ YV+L+N++A AG+W + R+ M R++ K GCSWI+ ++++H F
Sbjct: 695 DKLLSLEPHDSSTYVLLSNIYAAAGKWKERDEVRKLMDYRKVKKEAGCSWIQIKNKVHSF 754
Query: 584 RASDRSHDRSEEIY 597
A D+SH S++IY
Sbjct: 755 IAFDKSHPMSDQIY 768
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 108/463 (23%), Positives = 190/463 (41%), Gaps = 59/463 (12%)
Query: 65 VIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNG 124
V+ + + G E + + G+ ++ TLS VL AC + LG++ H + G
Sbjct: 70 VLFDYARRGMVLEVLDQFSVARRGGVLVDSATLSCVLKACRSVPDRVLGEQLHCLCVKCG 129
Query: 125 FMSNPFVV-NGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELF 183
LVD+Y +CG + +++F KN V
Sbjct: 130 HDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVV---------------------- 167
Query: 184 DQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMR-DGIEPTSFTFGSVLIACA 242
+W S+++G ++ E ++F MR +GI P FTF SVL A A
Sbjct: 168 -------------TWTSLLTGCAHAQMHSEVMALF--FRMRAEGIWPNPFTFASVLSAVA 212
Query: 243 DMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKM 302
+L G+ +HA ++ G +S FV +L+ MY + + A+ F+ +E + +
Sbjct: 213 SQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNT 272
Query: 303 KEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCG 362
G + N A+QLF E + T ++ C++L + +Q+H+ ++ G
Sbjct: 273 LMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHG 332
Query: 363 YDSDVHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNAMLTAYAMHGHGKEGIAHF 421
+ ++ TAL D Y+KCG L A + + + ++VS A+++ +G + F
Sbjct: 333 FHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLF 392
Query: 422 RRILASGFRPDHISF-------LSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCM 474
R+ P+ ++ LS L +HA IKT + + T +
Sbjct: 393 SRMREDRVMPNEFTYSAMLKASLSILPPQIHAQVIKTNYQHIPFVG-----------TAL 441
Query: 475 VDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
+ S+ G +A K I D V W A+L G+ E
Sbjct: 442 LASYSKFGSTEDALSIFKMIEQK-DVVAWSAMLSCHAQAGDCE 483
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 159/359 (44%), Gaps = 32/359 (8%)
Query: 199 NSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAI 258
N ++ Y + E F + R G+ S T VL AC + G+++H L +
Sbjct: 68 NRVLFDYARRGMVLEVLDQF-SVARRGGVLVDSATLSCVLKACRSVPDRVLGEQLHCLCV 126
Query: 259 ALGL-QSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAM 317
G + + G +LV+MY + + E IE G K+ NV TW ++
Sbjct: 127 KCGHDRGEVSAGTSLVDMYMKCGSVC---------EGIEVFEGMPKK-----NVVTWTSL 172
Query: 318 -------QLFSEMLSL-------DLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGY 363
Q+ SE+++L + P+ +T +LSA +S ++ G++VHA +++ G
Sbjct: 173 LTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGC 232
Query: 364 DSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRR 423
S V + +L++MYAKCG ++ A+ + + T D+VS N ++ ++ E + F
Sbjct: 233 RSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHE 292
Query: 424 ILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGE 483
A+ + ++ + + C + + + + + + T + D S+ GE
Sbjct: 293 SRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGE 352
Query: 484 LGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIE--LEPNNTGNYVML 540
L +A + + V W A++ GC+ +G++ + R+ E + PN ML
Sbjct: 353 LADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAML 411
>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
Length = 924
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 179/559 (32%), Positives = 290/559 (51%), Gaps = 48/559 (8%)
Query: 48 RMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEG--LEPNARTLSSVLPACA 105
+MS + N N+VSW+ +I F+ G EA +L MQ +G ++ N T+ +VLPAC
Sbjct: 303 QMSFVKNNNKNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMKANEVTILNVLPACL 362
Query: 106 RLQKLSLGKEFHGYITRNGF----MSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEV 161
+L KE HGY R+ F +SN F++ Y +CG + SA K+F K
Sbjct: 363 DKLQLRSLKELHGYSFRHCFQHVELSNAFIL-----AYAKCGALNSAEKVFHGIGDKT-- 415
Query: 162 SCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDL 221
+ SWN++I G+ N +A + +
Sbjct: 416 ---------------------------------VSSWNALIGGHAQNGDPRKALHLLFQM 442
Query: 222 LMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQD 281
G +P FT S+L+ACA + SL+ GKEIH + GL++D FVG +L+ Y
Sbjct: 443 -TYSGQQPDWFTISSLLLACAHLKSLQYGKEIHGYVLRNGLETDFFVGTSLLSHYIHCGK 501
Query: 282 LVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSA 341
+A++ FD +++ + G+ N + ++ LF + LS + + + A
Sbjct: 502 ASSARVLFDRMKDKNLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQSHEIAIVSVFGA 561
Query: 342 CSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQ 401
CS L+ + GK+ H Y ++ D +G +++DMYAK G +K +R + + ++ S
Sbjct: 562 CSQLSALRLGKEAHGYVLKALQTEDAFVGCSIIDMYAKSGCIKESRKVFDGLKDKNVASW 621
Query: 402 NAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY 461
NA++ A+ +HGHGKE I + R+ G PD +++ L AC HAG ++ G ++F M
Sbjct: 622 NAIIVAHGIHGHGKEAIELYERMKKVGQMPDRFTYIGILMACGHAGLVEEGLKYFKEMQN 681
Query: 462 YD-VKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQ 520
++ ++P L+HY C++D+L+RAG L +A + ++P D+ +W +LL C + G LE G+
Sbjct: 682 FNLIEPKLEHYACLIDMLARAGRLDDALRLVNEMPEEADNRIWSSLLRSCRTFGALEIGE 741
Query: 521 IAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEI 580
A +L+ELEP+ NYV+L+NL+A G+W + R RQ MK+ + K GCSWIE +
Sbjct: 742 KVAKKLLELEPDKAENYVLLSNLYAGLGKWDGVRRVRQMMKEIGLQKDAGCSWIEVGGRV 801
Query: 581 HKFRASDRSHDRSEEIYTI 599
+ F D +S EI I
Sbjct: 802 YSFVVGDSLQPKSAEIRVI 820
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 159/607 (26%), Positives = 258/607 (42%), Gaps = 124/607 (20%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKCG++D+A KVF MPE NLV
Sbjct: 190 MYGKCGAVDEAMKVFDFMPE------------------------------------TNLV 213
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
SW+++I F++NG+ ++ +L M E GL P+ T+ ++LP CA ++ +G HG
Sbjct: 214 SWNSMICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGL 273
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ G V N +V +Y +CG + A F K + KN VS NT+I + G+V EA
Sbjct: 274 AVKLGLSEEVMVNNAMVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEGDVNEA 333
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
L +M+ G + ++ T +VL
Sbjct: 334 FNLLQEMQIQG----------------------------------EEMKANEVTILNVLP 359
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAF-----DEIEN 294
AC D LR KE+H + Q + A + Y + L +A+ F + +
Sbjct: 360 ACLDKLQLRSLKELHGYSFRHCFQH-VELSNAFILAYAKCGALNSAEKVFHGIGDKTVSS 418
Query: 295 IENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV 354
L+G ++G +P A+ L +M PD +T+ +L AC+ L +++ GK++
Sbjct: 419 WNALIGGHAQNG-DPR----KALHLLFQMTYSGQQPDWFTISSLLLACAHLKSLQYGKEI 473
Query: 355 HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHG 414
H Y +R G ++D +GT+L+ Y CG AR+ + R+ +LVS NAM++ Y+ +G
Sbjct: 474 HGYVLRNGLETDFFVGTSLLSHYIHCGKASSARVLFDRMKDKNLVSWNAMISGYSQNGLP 533
Query: 415 KEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSE-------------------F 455
E +A FR+ L+ G + I+ +S AC +++ G E
Sbjct: 534 YESLALFRKSLSEGIQSHEIAIVSVFGACSQLSALRLGKEAHGYVLKALQTEDAFVGCSI 593
Query: 456 FDLMAYYD-VKPSLKHYTCMVD--------------LLSRAGELGEAYEFIKKIPMAPDS 500
D+ A +K S K + + D + E E YE +KK+ PD
Sbjct: 594 IDMYAKSGCIKESRKVFDGLKDKNVASWNAIIVAHGIHGHGKEAIELYERMKKVGQMPDR 653
Query: 501 VMWGALLGGCVSHGNLE-----FGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLAR 555
+ +L C G +E F ++ LIE + +Y L ++ A AGR D R
Sbjct: 654 FTYIGILMACGHAGLVEEGLKYFKEMQNFNLIEPKLE---HYACLIDMLARAGRLDDALR 710
Query: 556 TRQKMKD 562
+M +
Sbjct: 711 LVNEMPE 717
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 123/473 (26%), Positives = 211/473 (44%), Gaps = 70/473 (14%)
Query: 55 ETPNLVSWSAVIGGFTQNG-----YDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQK 109
ET NL + +I +QN +EAIG+L L AC +
Sbjct: 17 ETDNLTTALILIQSHSQNAAFISLQAKEAIGLL------------------LQACGNQKD 58
Query: 110 LSLGKEFHGYITRNGFMSNPFVVNG-LVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIV 168
+ G+ H +++ + N +V+N L+ +Y CG L
Sbjct: 59 IETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGSPL---------------------- 96
Query: 169 GYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIE 228
++R +FD ME + +I WN+++SGY N LY + +F DL+ +
Sbjct: 97 ---------DSRLVFDNME----TKNLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQ 143
Query: 229 PTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMA 288
P +FTF SV+ AC + +R G+ IH + I +GL D FVG ALV MY + + A
Sbjct: 144 PDNFTFPSVIKACGGILDVRLGEVIHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKV 203
Query: 289 FDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLD-LTPDIYTVGIILSACSSLAT 347
FD + + F N ++ ++ L EML + L PD+ TV IL C+
Sbjct: 204 FDFMPETNLVSWNSMICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGE 263
Query: 348 MERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTA 407
++ G +H A++ G +V + A+V MY+KCG L A++++ + + ++VS N M++A
Sbjct: 264 VDIGMGIHGLAVKLGLSEEVMVNNAMVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISA 323
Query: 408 YAMHGHGKEGIAHFRRILASG--FRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVK 465
+++ G E + + G + + ++ L+ L AC+ +++ E Y +
Sbjct: 324 FSLEGDVNEAFNLLQEMQIQGEEMKANEVTILNVLPACLDKLQLRSLKELHG----YSFR 379
Query: 466 PSLKHY---TCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
+H + ++ G L A + I S W AL+GG +G+
Sbjct: 380 HCFQHVELSNAFILAYAKCGALNSAEKVFHGIGDKTVS-SWNALIGGHAQNGD 431
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 125/531 (23%), Positives = 213/531 (40%), Gaps = 104/531 (19%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALEC-LERMSSLDNETPNL 59
MY CGS D++ VF M ++ + WN++V+ NGL + ++ ++ +S D + N
Sbjct: 88 MYAMCGSPLDSRLVFDNMETKNLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNF 147
Query: 60 VSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
T SV+ AC + + LG+ HG
Sbjct: 148 ------------------------------------TFPSVIKACGGILDVRLGEVIHGM 171
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ + G + + FV N LV +Y +CG + A+K+F N VS N++I + ENG
Sbjct: 172 VIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAFSENG----- 226
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
++F + ++L +G+ P T ++L
Sbjct: 227 ------------------------------FSRDSFDLLMEMLGEEGLLPDVVTVVTILP 256
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
CA + G IH LA+ LGL + V A+V MY + L AQM+F + N
Sbjct: 257 VCAGEGEVDIGMGIHGLAVKLGLSEEVMVNNAMVYMYSKCGYLNEAQMSFVKNNN----- 311
Query: 300 GKMKEDGFEPNVYTWNAM--------------QLFSEM--LSLDLTPDIYTVGIILSACS 343
NV +WN M L EM ++ + T+ +L AC
Sbjct: 312 ---------KNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMKANEVTILNVLPACL 362
Query: 344 SLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNA 403
+ K++H Y+ R + V + A + YAKCG+L A + I + S NA
Sbjct: 363 DKLQLRSLKELHGYSFRHCFQH-VELSNAFILAYAKCGALNSAEKVFHGIGDKTVSSWNA 421
Query: 404 MLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYD 463
++ +A +G ++ + ++ SG +PD + S L AC H S++ G E +
Sbjct: 422 LIGGHAQNGDPRKALHLLFQMTYSGQQPDWFTISSLLLACAHLKSLQYGKEIHGYVLRNG 481
Query: 464 VKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
++ T ++ G+ A ++ + V W A++ G +G
Sbjct: 482 LETDFFVGTSLLSHYIHCGKASSARVLFDRMK-DKNLVSWNAMISGYSQNG 531
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 99/197 (50%), Gaps = 6/197 (3%)
Query: 335 VGIILSACSSLATMERGKQVHAY-AIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRI 393
+G++L AC + +E G+++H + + Y +D + T L+ MYA CGS +RL + +
Sbjct: 46 IGLLLQACGNQKDIETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGSPLDSRLVFDNM 105
Query: 394 STPDLVSQNAMLTAYAMHGHGKEGIAHFRRILA-SGFRPDHISFLSALSACVHAGSIKTG 452
T +L+ NA+++ Y +G + + F +++ + F+PD+ +F S + AC ++ G
Sbjct: 106 ETKNLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDVRLG 165
Query: 453 SEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVS 512
++ + + +V + + G + EA + +P + V W +++
Sbjct: 166 EVIHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMP-ETNLVSWNSMICAFSE 224
Query: 513 HGNLEFGQIAADRLIEL 529
+G F + + D L+E+
Sbjct: 225 NG---FSRDSFDLLMEM 238
>gi|255551961|ref|XP_002517025.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543660|gb|EEF45188.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 640
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 184/573 (32%), Positives = 309/573 (53%), Gaps = 29/573 (5%)
Query: 53 DNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSL 112
+ PN W+A+I GFT+N E A +M E + P T++SVL A +RL ++
Sbjct: 61 ETPEPNSFLWTALIHGFTENNQYENAFAFFIKMHRENIVPLNFTIASVLKAVSRLGRIKD 120
Query: 113 GKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCE 172
G +G R G+ + V N +++++ RCG+M SA ++F + ++ VS N++I GY
Sbjct: 121 GDLVYGLAVRCGYEFDLVVKNVMIELFMRCGEMGSARQMFDEMEERDAVSWNSMITGYGN 180
Query: 173 NGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRD----GIE 228
NG V AR+LFD+ME +R +ISW SMI GYV EA +F + +D +
Sbjct: 181 NGRVDIARKLFDRME----ERNVISWTSMIQGYVKAGDLLEARVLFERMPEKDLASWKVM 236
Query: 229 PTSFTFGSVLIACADMNSLR----------------KGKEIHALAIALGLQSDTFVGG-- 270
+++ L+A ++ L K E+ A + V
Sbjct: 237 VSAYMSVGNLVAARNLFELMPIHDVGTWNLMISGCCKAGEMDAAKEFFDRMQERNVASWV 296
Query: 271 ALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTP 330
+++ Y + D+ AA+ FD++ + G+ + +++++L+ + P
Sbjct: 297 MIIDGYIKVGDVDAARSVFDQMPEKNLVAWSTMIGGYAKTGHPYSSLKLYKTFKEQGIKP 356
Query: 331 D-IYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLA 389
D + +GII SACS L + + V + ++ + T+L+DMYAKCG+++ A
Sbjct: 357 DETFALGII-SACSQLGVPDTAESVICDFVGPSLFPNLQVVTSLIDMYAKCGNIERAVQV 415
Query: 390 YKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSI 449
++ + DL + ++TA+A HG ++ I+ F + + +PD ++FL L+AC H G +
Sbjct: 416 FEMVDQKDLHCYSTVITAFANHGLSEDAISLFSEMQKANIKPDGVAFLGVLTACNHGGLV 475
Query: 450 KTGSEFF-DLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLG 508
G F ++ Y ++PS KHY CMVD+L RAG L EA+ I +P+AP++ +WGALL
Sbjct: 476 GEGRRLFRQMIDEYGIQPSEKHYACMVDILGRAGCLEEAHSLICSMPVAPNATVWGALLS 535
Query: 509 GCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKS 568
C H N++ + AA L ++EPNN+GNYV+L N++A AG+W D ++ R +++ R+ K+
Sbjct: 536 ACRVHLNVQLAEAAATELFQIEPNNSGNYVLLFNIYADAGQWDDFSKVRAMIRENRVRKN 595
Query: 569 PGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
G SWIE IH+F D+SH SE I+ +++
Sbjct: 596 RGSSWIELGSVIHEFVMGDKSHFDSERIFFMLE 628
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 105/422 (24%), Positives = 194/422 (45%), Gaps = 38/422 (9%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
++ +CG + A+++F M ERD VSWNS++T NG V A + +RM E N++
Sbjct: 146 LFMRCGEMGSARQMFDEMEERDAVSWNSMITGYGNNGRVDIARKLFDRM-----EERNVI 200
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+++I G+ + G EA + RM + L +S+ +S+G
Sbjct: 201 SWTSMIQGYVKAGDLLEARVLFERMPEKDLASWKVMVSAY---------MSVGNLVAA-- 249
Query: 121 TRNGFMSNPF----VVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNV 176
RN F P N ++ + G+M +A + F + +N S II GY + G+V
Sbjct: 250 -RNLFELMPIHDVGTWNLMISGCCKAGEMDAAKEFFDRMQERNVASWVMIIDGYIKVGDV 308
Query: 177 AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEP-TSFTFG 235
AR +FDQM ++ +++W++MI GY + +++ GI+P +F G
Sbjct: 309 DAARSVFDQMP----EKNLVAWSTMIGGYAKTGHPYSSLKLYKT-FKEQGIKPDETFALG 363
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
++ AC+ + + + + L + V +L++MY + ++ A F+ ++
Sbjct: 364 -IISACSQLGVPDTAESVICDFVGPSLFPNLQVVTSLIDMYAKCGNIERAVQVFEMVDQK 422
Query: 296 ENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ-- 353
+ F + + +A+ LFSEM ++ PD +L+AC+ + G++
Sbjct: 423 DLHCYSTVITAFANHGLSEDAISLFSEMQKANIKPDGVAFLGVLTACNHGGLVGEGRRLF 482
Query: 354 ---VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHAR-LAYKRISTPDLVSQNAMLTAYA 409
+ Y I+ S+ H +VD+ + G L+ A L P+ A+L+A
Sbjct: 483 RQMIDEYGIQ---PSEKHYA-CMVDILGRAGCLEEAHSLICSMPVAPNATVWGALLSACR 538
Query: 410 MH 411
+H
Sbjct: 539 VH 540
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 140/312 (44%), Gaps = 14/312 (4%)
Query: 246 SLRKGKEIHA-LAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKE 304
SL+ IHA L I+ + S L+ +Y ++ + A FDE + L
Sbjct: 15 SLKTLTTIHAHLLISGSIASSDLTLNKLLRLYSKFGAVSYAHKLFDETPEPNSFLWTALI 74
Query: 305 DGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYD 364
GF N NA F +M ++ P +T+ +L A S L ++ G V+ A+RCGY+
Sbjct: 75 HGFTENNQYENAFAFFIKMHRENIVPLNFTIASVLKAVSRLGRIKDGDLVYGLAVRCGYE 134
Query: 365 SDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRI 424
D+ + +++++ +CG + AR + + D VS N+M+T Y +G+ IA R++
Sbjct: 135 FDLVVKNVMIELFMRCGEMGSARQMFDEMEERDAVSWNSMITGYG--NNGRVDIA--RKL 190
Query: 425 LASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGEL 484
+ IS+ S + V AG + F+ M D L + MV G L
Sbjct: 191 FDRMEERNVISWTSMIQGYVKAGDLLEARVLFERMPEKD----LASWKVMVSAYMSVGNL 246
Query: 485 GEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLF 544
A + +P+ D W ++ GC G ++ + DR+ E N ++VM+ + +
Sbjct: 247 VAARNLFELMPIH-DVGTWNLMISGCCKAGEMDAAKEFFDRMQE---RNVASWVMIIDGY 302
Query: 545 AYAGRWSDLART 556
G D AR+
Sbjct: 303 IKVGD-VDAARS 313
>gi|414866530|tpg|DAA45087.1| TPA: hypothetical protein ZEAMMB73_840863 [Zea mays]
Length = 851
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 188/588 (31%), Positives = 310/588 (52%), Gaps = 29/588 (4%)
Query: 3 GKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSW 62
+ G+++ A+ F+ MP R S+N+++ N L AL RM + D L S+
Sbjct: 28 ARTGNMEGARATFEAMPLRTTASYNALLAGYFRNHLPDAALRVFHRMPTRD-----LASY 82
Query: 63 SAVIGGFTQNGYD-EEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
+A+I G + + +A L + P+ + +S+L R L+ + +
Sbjct: 83 NALISGLSLRRHTLPDAAAALATIP---YPPSVVSFTSLLRGYVRHGLLADAIQLFRQMP 139
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
+S ++ G +D G + A K+F + K+ V+ ++ GYC+ G V EAR
Sbjct: 140 ERNHISYTVLLGGFLD----AGRVDEARKLFDEMPAKDVVAWTAMLSGYCQVGRVDEART 195
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA- 240
LFD+M +R ++SW +M+SGY N + A +F + R+ + T+ FG +
Sbjct: 196 LFDEMP----KRNVVSWTAMVSGYAQNGQVNLARKLFEVMPERNEVSWTAMLFGYIQAGR 251
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
D L H LA G+ VG + + + AA+ FD + ++
Sbjct: 252 IEDAEELFNAMPDHPLAACNGM----IVG------FGQQGMVDAAKSVFDRMCERDDGTW 301
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
+E N + A+ F EML + + P+ +V IL+ C++LA ++ G++VH +R
Sbjct: 302 SAIIKAYEQNEFLMEALSTFREMLHIGIRPNYPSVISILTVCAALAVLDYGREVHGAMLR 361
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
+D D++ +AL+ MY KCG+L A+ + D+V N+M+T YA HG G+E +
Sbjct: 362 RSFDMDIYAVSALITMYIKCGNLDKAKRVFHMFEPKDVVMWNSMITGYAQHGLGEEALHI 421
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYD-VKPSLKHYTCMVDLLS 479
F + +G PD I+++ AL+AC + G +K G + F+ M +KP L+HY CMVDLL
Sbjct: 422 FDDMRLAGMVPDGITYIGALTACSYTGKVKEGRDIFNSMRTKSGIKPGLEHYACMVDLLG 481
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
RAG + EA IK +P+ PD+V+WGAL+G C H N E +I+A +L+ELEP N G YV+
Sbjct: 482 RAGLVDEALYLIKTMPVEPDAVIWGALMGACRMHKNAEIAEISAKKLLELEPGNAGPYVL 541
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASD 587
L++++ +GRW D + R+ + R ++KS GCSWIE +H F++ D
Sbjct: 542 LSHIYTSSGRWEDASNMRKFISSRHLNKSLGCSWIEYDKRVHLFKSGD 589
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 102/412 (24%), Positives = 192/412 (46%), Gaps = 20/412 (4%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y + G L DA ++F+ MPER+ +S+ ++ G V EA + + M + D +V+
Sbjct: 122 YVRHGLLADAIQLFRQMPERNHISYTVLLGGFLDAGRVDEARKLFDEMPAKD-----VVA 176
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W+A++ G+ Q G +EA + M N + ++++ A+ +++L ++ +
Sbjct: 177 WTAMLSGYCQVGRVDEARTLFDEMPKR----NVVSWTAMVSGYAQNGQVNLARKLFEVMP 232
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
+S ++ G Y + G + A ++F+ +CN +IVG+ + G V A+
Sbjct: 233 ERNEVSWTAMLFG----YIQAGRIEDAEELFNAMPDHPLAACNGMIVGFGQQGMVDAAKS 288
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
+FD+M +R +W+++I Y N EA S FR++L GI P + S+L C
Sbjct: 289 VFDRM----CERDDGTWSAIIKAYEQNEFLMEALSTFREML-HIGIRPNYPSVISILTVC 343
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK 301
A + L G+E+H + D + AL+ MY + +L A+ F E + ++
Sbjct: 344 AALAVLDYGREVHGAMLRRSFDMDIYAVSALITMYIKCGNLDKAKRVFHMFEPKDVVMWN 403
Query: 302 MKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV-HAYAIR 360
G+ + A+ +F +M + PD T L+ACS ++ G+ + ++ +
Sbjct: 404 SMITGYAQHGLGEEALHIFDDMRLAGMVPDGITYIGALTACSYTGKVKEGRDIFNSMRTK 463
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST-PDLVSQNAMLTAYAMH 411
G + +VD+ + G + A K + PD V A++ A MH
Sbjct: 464 SGIKPGLEHYACMVDLLGRAGLVDEALYLIKTMPVEPDAVIWGALMGACRMH 515
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 81/190 (42%), Gaps = 42/190 (22%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG+LD AK+VF M +D V WNS++T A +GL
Sbjct: 377 MYIKCGNLDKAKRVFHMFEPKDVVMWNSMITGYAQHGL---------------------- 414
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKE-FHGY 119
EEA+ + M+ G+ P+ T L AC+ K+ G++ F+
Sbjct: 415 --------------GEEALHIFDDMRLAGMVPDGITYIGALTACSYTGKVKEGRDIFNSM 460
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYC---ENGNV 176
T++G +VD+ R G + AL + ++ + ++G C +N +
Sbjct: 461 RTKSGIKPGLEHYACMVDLLGRAGLVDEALYLIKTMPVEPDAVIWGALMGACRMHKNAEI 520
Query: 177 AE--ARELFD 184
AE A++L +
Sbjct: 521 AEISAKKLLE 530
>gi|242064134|ref|XP_002453356.1| hypothetical protein SORBIDRAFT_04g004500 [Sorghum bicolor]
gi|241933187|gb|EES06332.1| hypothetical protein SORBIDRAFT_04g004500 [Sorghum bicolor]
Length = 807
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 177/627 (28%), Positives = 311/627 (49%), Gaps = 77/627 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGS+ DA ++F M +PN V
Sbjct: 186 MYTKCGSVADAVRLFDWM------------------------------------SSPNEV 209
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARL--------QKLSL 112
S++A++GG Q+G ++A+ + RM + + +SSVL ACA+ + + L
Sbjct: 210 SFTAMMGGLAQSGAVDDALRLFARMSRSAIRVDPVAVSSVLGACAQACAGDYNVARAIRL 269
Query: 113 GKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCE 172
+ H + R GF S+ V N L+D+Y + M A+K+F S + VS N ++ GY +
Sbjct: 270 AQSIHALVVRKGFDSDQHVGNSLIDMYAKGMKMDEAMKVFESMSSVSIVSWNILVTGYGQ 329
Query: 173 NGNVAEARELFDQMEHLGVQRG-------------------------------IISWNSM 201
G A E+ D M+ G + + +WN++
Sbjct: 330 LGCYERALEVLDLMQESGFEPNEVTYSNMLASCIKARDVPSARAMFDKISKPSVTTWNTL 389
Query: 202 ISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALG 261
+SGY L+ + +FR + ++ ++P T +L C+ + L GK++H+ ++ L
Sbjct: 390 LSGYGQEELHQDTIELFRRMQHQN-VQPDRTTLAVILSTCSRLGILELGKQVHSASVKLL 448
Query: 262 LQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFS 321
L +D FV L++MY + + AQ+ F+ + + + G + A F
Sbjct: 449 LHNDMFVASGLIDMYSKCGQVGIAQIIFNMMTERDVVCWNSMISGLAIHSLNEEAFDFFK 508
Query: 322 EMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCG 381
+M + P + ++++C+ L+++ +G+Q+HA ++ GYD +V++G++L+DMYAKCG
Sbjct: 509 QMRENGMFPTESSYASMINSCARLSSIPQGRQIHAQVLKDGYDQNVYVGSSLIDMYAKCG 568
Query: 382 SLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALS 441
++ ARL + + ++V+ N M+ YA +G G++ + F +L + +PD ++F++ L+
Sbjct: 569 NMDDARLFFNCMIVKNIVAWNEMIHGYAQNGFGEKAVELFEYMLTTKQKPDSVTFIAVLT 628
Query: 442 ACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDS 500
C H+G + +F+ M + Y ++P ++HYTC++D L RAG E I K+P D+
Sbjct: 629 GCSHSGLVDEAIAYFNSMESNYGIRPLVEHYTCLIDALGRAGRFAEVVAVIDKMPYKDDA 688
Query: 501 VMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKM 560
++W LL CV H N E G+ AA L L+P N YV+L+N++A GR D + R M
Sbjct: 689 ILWEVLLAACVVHHNAELGEFAAKHLFRLDPKNPSPYVLLSNIYATLGRHGDASAVRALM 748
Query: 561 KDRRMHKSPGCSWIEDRDEIHKFRASD 587
R + K G SW+ +D F +D
Sbjct: 749 SSRGVVKGRGYSWVNHKDGARAFMVAD 775
Score = 205 bits (522), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 168/674 (24%), Positives = 283/674 (41%), Gaps = 159/674 (23%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y G A + F+ +P + S+N+ ++A G + A + L RM N V
Sbjct: 54 LYSLSGLPCHALRAFRALPRPNVYSYNAAISAACRAGDLAAARDLLGRMPD-----RNAV 108
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ VI ++ EA+ M M EGL P TL+SVL AC + L G+ HG
Sbjct: 109 SWNTVIAAVARSDSPGEALEMYRGMLQEGLAPTNFTLASVLSACGAVAALDDGRRCHGLA 168
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G N FV NGL+ +Y +CG + A+++F S NEVS ++ G ++G V +A
Sbjct: 169 VKVGLDGNQFVENGLLGMYTKCGSVADAVRLFDWMSSPNEVSFTAMMGGLAQSGAVDDAL 228
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LF +M ++ ++P + + SVL A
Sbjct: 229 RLFARMSRSAIR----------------------------------VDPVAVS--SVLGA 252
Query: 241 CA-----DMN---SLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI 292
CA D N ++R + IHAL + G SD VG +L++MY + + A F+ +
Sbjct: 253 CAQACAGDYNVARAIRLAQSIHALVVRKGFDSDQHVGNSLIDMYAKGMKMDEAMKVFESM 312
Query: 293 ENIE---------------------NLLGKMKEDGFEPN--------------------- 310
++ +L M+E GFEPN
Sbjct: 313 SSVSIVSWNILVTGYGQLGCYERALEVLDLMQESGFEPNEVTYSNMLASCIKARDVPSAR 372
Query: 311 ----------VYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSSLA 346
V TWN + +LF M ++ PD T+ +ILS CS L
Sbjct: 373 AMFDKISKPSVTTWNTLLSGYGQEELHQDTIELFRRMQHQNVQPDRTTLAVILSTCSRLG 432
Query: 347 TMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLT 406
+E GKQVH+ +++ +D+ + + L+DMY+KCG + A++ + ++ D+V N+M++
Sbjct: 433 ILELGKQVHSASVKLLLHNDMFVASGLIDMYSKCGQVGIAQIIFNMMTERDVVCWNSMIS 492
Query: 407 AYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKP 466
A+H +E F+++ +G P S+ S +++C SI G + +
Sbjct: 493 GLAIHSLNEEAFDFFKQMRENGMFPTESSYASMINSCARLSSIPQGRQIHAQVLKDGYDQ 552
Query: 467 SLKHYTCMVDLLSRAGELGEA----------------------------------YEFIK 492
++ + ++D+ ++ G + +A +E++
Sbjct: 553 NVYVGSSLIDMYAKCGNMDDARLFFNCMIVKNIVAWNEMIHGYAQNGFGEKAVELFEYML 612
Query: 493 KIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTG------NYVMLANLFAY 546
PDSV + A+L GC SH L IA +E +N G +Y L +
Sbjct: 613 TTKQKPDSVTFIAVLTGC-SHSGLVDEAIAYFNSME---SNYGIRPLVEHYTCLIDALGR 668
Query: 547 AGRWSDLARTRQKM 560
AGR++++ KM
Sbjct: 669 AGRFAEVVAVIDKM 682
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 138/330 (41%), Gaps = 50/330 (15%)
Query: 258 IALGLQSDTFVGGALVEMYC---------------------RYQDLVAAQMAFDEIENIE 296
+A GL +DTF+ LVE+Y Y ++A ++
Sbjct: 37 LAAGLAADTFLLNRLVELYSLSGLPCHALRAFRALPRPNVYSYNAAISAACRAGDLAAAR 96
Query: 297 NLLGKMKEDGFEPNVYTWN--------------AMQLFSEMLSLDLTPDIYTVGIILSAC 342
+LLG+M + N +WN A++++ ML L P +T+ +LSAC
Sbjct: 97 DLLGRMPDR----NAVSWNTVIAAVARSDSPGEALEMYRGMLQEGLAPTNFTLASVLSAC 152
Query: 343 SSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQN 402
++A ++ G++ H A++ G D + + L+ MY KCGS+ A + +S+P+ VS
Sbjct: 153 GAVAALDDGRRCHGLAVKVGLDGNQFVENGLLGMYTKCGSVADAVRLFDWMSSPNEVSFT 212
Query: 403 AMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVH--------AGSIKTGSE 454
AM+ A G + + F R+ S R D ++ S L AC A +I+
Sbjct: 213 AMMGGLAQSGAVDDALRLFARMSRSAIRVDPVAVSSVLGACAQACAGDYNVARAIRLAQS 272
Query: 455 FFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
L+ ++D+ ++ ++ EA + + + + V W L+ G G
Sbjct: 273 IHALVVRKGFDSDQHVGNSLIDMYAKGMKMDEAMKVFESMS-SVSIVSWNILVTGYGQLG 331
Query: 515 NLEFGQIAADRLIE--LEPNNTGNYVMLAN 542
E D + E EPN MLA+
Sbjct: 332 CYERALEVLDLMQESGFEPNEVTYSNMLAS 361
>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 783
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 182/602 (30%), Positives = 308/602 (51%), Gaps = 73/602 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y K + A+KVF MPERD V WN++
Sbjct: 152 LYCKFSRVVYARKVFDGMPERDTVLWNTM------------------------------- 180
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
I G +N +++I + M A+G+ ++ T+++VLPA A LQ+L +G
Sbjct: 181 -----INGLVKNCCFDDSIQLFREMVADGVRVDSSTVTAVLPAAAELQELKVGMGIQCLA 235
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ GF +V+ GL+ +Y +CGD+ +A +F + + + ++ N +I G+ NG +
Sbjct: 236 LKIGFGFCDYVLTGLISLYSKCGDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECSV 295
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+LF ++ G + +S ++++ G+ P FG + +A
Sbjct: 296 KLFRELLFSGER---VSSSTIV-----------------------GLIPLHSPFGHLHLA 329
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C+ IH + G+ + V A +Y + ++ A+ FDE +
Sbjct: 330 CS----------IHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKTVVAW 379
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G+ N T A+ LF EM+ + TP+ T+ ILSAC+ L ++ GK VH
Sbjct: 380 NAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKWVHHLIKS 439
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
+ ++++ TALVDMYAKCG++ A + +S + V+ N M+ Y +HG+G E +
Sbjct: 440 ENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGYGLHGYGHEALKL 499
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFF-DLMAYYDVKPSLKHYTCMVDLLS 479
+ +L G+ P ++FLS L AC HAG + G E F +++ Y ++P ++HY CMVD+L
Sbjct: 500 YNEMLHLGYNPSAVTFLSVLYACSHAGLVGEGEEIFHNMVNKYRIEPLIEHYACMVDILG 559
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
R+G+L +A EFIKK+P+ P +WG LLG C+ H + + ++A++RL EL+P + G YV+
Sbjct: 560 RSGQLEKALEFIKKMPVEPGPAVWGTLLGACMIHKDTDIARLASERLFELDPGSVGYYVL 619
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTI 599
L+N+++ + A RQ +K R++ KSPGC+ IE H F + DRSH + +IY
Sbjct: 620 LSNIYSVERNFPKAASIRQVVKKRKLAKSPGCTLIEVNGTPHVFVSGDRSHSHATDIYAK 679
Query: 600 ID 601
++
Sbjct: 680 LE 681
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 103/459 (22%), Positives = 206/459 (44%), Gaps = 41/459 (8%)
Query: 57 PNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKE 115
P++ ++ ++ GF+ N +I + ++ L P+ T + + AC+ + L L
Sbjct: 73 PDIFLFNVLVRGFSLNDSPSSSISLYTHLRRNTNLSPDNFTYAFAVAACSNDKHLML--- 129
Query: 116 FHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGN 175
H + +G+ SN FV + LVD+Y + ++ A K+F ++ V NT+I G +N
Sbjct: 130 LHAHSIIDGYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMINGLVKN-- 187
Query: 176 VAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFG 235
+D++ +FR+++ DG+ S T
Sbjct: 188 ---------------------------------CCFDDSIQLFREMVA-DGVRVDSSTVT 213
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
+VL A A++ L+ G I LA+ +G +V L+ +Y + D+ A++ F I
Sbjct: 214 AVLPAAAELQELKVGMGIQCLALKIGFGFCDYVLTGLISLYSKCGDVNTARLLFRRINRP 273
Query: 296 ENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVH 355
+ + GF N T +++LF E+L T+ ++ S + +H
Sbjct: 274 DLIAYNAMISGFTANGGTECSVKLFRELLFSGERVSSSTIVGLIPLHSPFGHLHLACSIH 333
Query: 356 AYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGK 415
+ ++ G + + TA +Y K + AR + +V+ NAM++ Y +G +
Sbjct: 334 GFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKTVVAWNAMISGYTQNGSTE 393
Query: 416 EGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMV 475
I+ F+ ++ + F P+ ++ + LSAC GS+ G L+ +++P++ T +V
Sbjct: 394 TAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKWVHHLIKSENLEPNIYVSTALV 453
Query: 476 DLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
D+ ++ G + EA++ + ++V W ++ G HG
Sbjct: 454 DMYAKCGNISEAWQLFDSMS-EKNTVTWNTMIFGYGLHG 491
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 114/425 (26%), Positives = 198/425 (46%), Gaps = 50/425 (11%)
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
AR LF + + I +N ++ G+ N + S++ L + P +FT+
Sbjct: 62 HARALFFSVP----KPDIFLFNVLVRGFSLNDSPSSSISLYTHLRRNTNLSPDNFTYAFA 117
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
+ AC++ L +HA +I G S+ FVG ALV++YC++ +V A+ FD + +
Sbjct: 118 VAACSNDKHLML---LHAHSIIDGYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPERDT 174
Query: 298 LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAY 357
+L +G N +++QLF EM++ + D TV +L A + L ++ G +
Sbjct: 175 VLWNTMINGLVKNCCFDDSIQLFREMVADGVRVDSSTVTAVLPAAAELQELKVGMGIQCL 234
Query: 358 AIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEG 417
A++ G+ ++ T L+ +Y+KCG + ARL ++RI+ PDL++ NAM++ + +G +
Sbjct: 235 ALKIGFGFCDYVLTGLISLYSKCGDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECS 294
Query: 418 IAHFRRILASGFR----------PDHISFLSALSAC-VHAGSIKTG-------SEFF--- 456
+ FR +L SG R P H F AC +H +K+G S F
Sbjct: 295 VKLFRELLFSGERVSSSTIVGLIPLHSPFGHLHLACSIHGFCVKSGIILNPTVSTAFTAI 354
Query: 457 -------DLMAY-YDVKP--SLKHYTCMVDLLSRAGELGEAYEFIK---KIPMAPDSVMW 503
DL + +D P ++ + M+ ++ G A K K P++V
Sbjct: 355 YNKLNEIDLARHLFDESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTI 414
Query: 504 GALLGGCVSHGNLEFGQIAADRLIE---LEPNNTGNYV--MLANLFAYAGRWSDLARTRQ 558
+L C G+L FG+ LI+ LEPN YV L +++A G S+ +
Sbjct: 415 TTILSACAQLGSLSFGK-WVHHLIKSENLEPN---IYVSTALVDMYAKCGNISEAWQLFD 470
Query: 559 KMKDR 563
M ++
Sbjct: 471 SMSEK 475
Score = 45.8 bits (107), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 76/187 (40%), Gaps = 29/187 (15%)
Query: 338 ILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPD 397
+ S + +T Q HA I GY D+ T L + +HAR + + PD
Sbjct: 15 LFSLINKASTFPHLAQTHAQFILNGYRFDLATLTKLTQKLFDFSATRHARALFFSVPKPD 74
Query: 398 LVSQNAMLTAYAMHGHGKEGIA---HFRRILASGFRPDHISFLSALSAC--------VHA 446
+ N ++ ++++ I+ H RR + PD+ ++ A++AC +HA
Sbjct: 75 IFLFNVLVRGFSLNDSPSSSISLYTHLRR--NTNLSPDNFTYAFAVAACSNDKHLMLLHA 132
Query: 447 GSI--KTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWG 504
SI GS F A +VDL + + A + +P D+V+W
Sbjct: 133 HSIIDGYGSNVFVGSA-------------LVDLYCKFSRVVYARKVFDGMP-ERDTVLWN 178
Query: 505 ALLGGCV 511
++ G V
Sbjct: 179 TMINGLV 185
>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Vitis vinifera]
Length = 1053
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 173/522 (33%), Positives = 276/522 (52%), Gaps = 39/522 (7%)
Query: 82 LFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRR 141
L M +GLE + SVL C + G+ H ++ + + ++ L+ +Y +
Sbjct: 465 LLEMGIQGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNK 524
Query: 142 CGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSM 201
C C + +AR + D+M +R ++SW +M
Sbjct: 525 C-------------------RC------------LGDARRVLDEMP----ERNVVSWTAM 549
Query: 202 ISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALG 261
ISGY EA +F ++LM G P FTF +VL +C + + G++IH+L I
Sbjct: 550 ISGYSQRGYASEALHLFVEMLM-SGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTS 608
Query: 262 LQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFS 321
+S FVG +L++MY + + A+ FD + + + G+ A+ LF
Sbjct: 609 FESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFR 668
Query: 322 EMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCG 381
+ + + T +L+A S LA ++ G+QVH++ +R V + +L+DMY+KCG
Sbjct: 669 RLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCG 728
Query: 382 SLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASG-FRPDHISFLSAL 440
SL ++R + + ++S NAML Y+ HG G+E + F+ + +PD ++FL+ L
Sbjct: 729 SLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVL 788
Query: 441 SACVHAGSIKTGSE-FFDLMAYYD-VKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAP 498
S C H G G E F++++ D +P ++HY C+VDL RAG + EA+EFIKK+P P
Sbjct: 789 SGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEP 848
Query: 499 DSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQ 558
+ +WG+LLG C H N+ G+ A RL+E+E N GNYV+L+NL+A AGRW D+ R+
Sbjct: 849 TAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAGRWDDVRTVRE 908
Query: 559 KMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTII 600
MK++ + K PG SWIE +H F ASDRSH R EE++ +
Sbjct: 909 LMKEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKEEVFAKV 950
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 101/429 (23%), Positives = 182/429 (42%), Gaps = 76/429 (17%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KC L DA++V MPER N+V
Sbjct: 521 LYNKCRCLGDARRVLDEMPER------------------------------------NVV 544
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A+I G++Q GY EA+ + M G PN T ++VL +C LG++ H +
Sbjct: 545 SWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLV 604
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ F S+ FV + L+D+Y + G + A ++F ++ VSC II GY + G EA
Sbjct: 605 IKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEAL 664
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+LF +++ R+G+ T+ SVL A
Sbjct: 665 DLFRRLQ------------------------------------REGMRSNYVTYASVLTA 688
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
+ + +L G+++H+ + L + +L++MY + L ++ FD + +
Sbjct: 689 LSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISW 748
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLD-LTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
G+ + A++LF M + + PD T +LS CS +RG ++ +
Sbjct: 749 NAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMV 808
Query: 360 --RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNAMLTAYAMHGHGKE 416
+ G++ ++ +VD++ + G ++ A K++ P ++L A +H +
Sbjct: 809 NQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHI 868
Query: 417 GIAHFRRIL 425
G RR+L
Sbjct: 869 GEFVARRLL 877
>gi|297805814|ref|XP_002870791.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316627|gb|EFH47050.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 674
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 181/530 (34%), Positives = 282/530 (53%), Gaps = 51/530 (9%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
+++SW+ +I G+ +NGY +A+ M M EG++P+ T+ S+LP C L+ L +G+ H
Sbjct: 182 DVISWNTMISGYYRNGYMNDALMMFDWMVNEGVDPDHATIVSMLPVCGHLKGLEMGRNVH 241
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
+ V N LV++Y +CG M
Sbjct: 242 KLVEEKRLGDKIEVKNALVNMYLKCGRM-------------------------------D 270
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
EAR +F +ME +R +I+W MI+GY+++ + A + R L+ +G+ P + T S+
Sbjct: 271 EARFVFGRME----RRDVITWTCMINGYIEDGDVENALELCR-LMQFEGVRPNAVTIASL 325
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMY--CRYQDL---VAAQMAFDEI 292
+ AC D L GK +H AI + SD + +L+ MY C++ DL V + + +
Sbjct: 326 VSACGDALKLNDGKCLHGWAIRQKVCSDIIIETSLISMYAKCKHIDLCFRVFSGASRNHT 385
Query: 293 ENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGK 352
++ G N +A+ LF M D+ P+I T+ +L A ++LA + +
Sbjct: 386 GPWSAIIA-----GCVQNELVRDALDLFKRMRREDVEPNIATLNSLLPAYATLADLRQTM 440
Query: 353 QVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS----TPDLVSQNAMLTAY 408
+H Y + G+ S + T LV +Y+KCG+L+ A + I + D+V A+++ Y
Sbjct: 441 NIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGY 500
Query: 409 AMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPS 467
MHG G + F ++ SG P+ I+F SAL+AC H+G ++ G F M +Y
Sbjct: 501 GMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFSFMLEHYKTLAR 560
Query: 468 LKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLI 527
HYTC+VDLL RAG L EAY I IP P S +WGALL CV+H N++ G++AA++L
Sbjct: 561 SNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTIWGALLAACVTHENVQLGEMAANKLF 620
Query: 528 ELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDR 577
ELEP NTGNYV+LAN++A GRW D+ + R M++ + K PG S IE R
Sbjct: 621 ELEPENTGNYVLLANIYAALGRWKDMEKVRNMMENVGLRKKPGHSTIEIR 670
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 104/407 (25%), Positives = 185/407 (45%), Gaps = 29/407 (7%)
Query: 164 NTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLM 223
+T+ V Y G++A AR+LFD+M Q ++S+N +I YV + LY +A ++F ++
Sbjct: 53 STLSVTYALCGHIAYARKLFDEMP----QSSLLSYNIVIRMYVRDGLYHDAINVFIRMV- 107
Query: 224 RDGIE--PTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQD 281
+GI+ P +T+ V A ++ S+ G IH + D +V AL+ MY +
Sbjct: 108 SEGIKCVPDGYTYPFVAKAAGELKSISLGLVIHGRILRSWFGMDKYVQNALLAMYMNFGR 167
Query: 282 LVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSA 341
+ A+ FD ++N + + G+ N Y +A+ +F M++ + PD T+ +L
Sbjct: 168 VEMARNVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNEGVDPDHATIVSMLPV 227
Query: 342 CSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQ 401
C L +E G+ VH + + ALV+MY KCG + AR + R+ D+++
Sbjct: 228 CGHLKGLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFGRMERRDVITW 287
Query: 402 NAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY 461
M+ Y G + + R + G RP+ ++ S +SAC A + G
Sbjct: 288 TCMINGYIEDGDVENALELCRLMQFEGVRPNAVTIASLVSACGDALKLNDGKCLHGWAIR 347
Query: 462 YDVKPSLKHYTCMVDLLSRAGELGEAYEFI---KKIPMAPDSVMWGALLGGCVSHGNLEF 518
V + T ++ + ++ + + + P W A++ GCV + E
Sbjct: 348 QKVCSDIIIETSLISMYAKCKHIDLCFRVFSGASRNHTGP----WSAIIAGCVQN---EL 400
Query: 519 GQIAAD-----RLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKM 560
+ A D R ++EPN +A L + ++ LA RQ M
Sbjct: 401 VRDALDLFKRMRREDVEPN-------IATLNSLLPAYATLADLRQTM 440
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 103/421 (24%), Positives = 168/421 (39%), Gaps = 86/421 (20%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG +D+A+ VF M RD ++
Sbjct: 262 MYLKCGRMDEARFVFGRMERRD------------------------------------VI 285
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+ +I G+ ++G E A+ + MQ EG+ PNA T++S++ AC KL+ GK HG+
Sbjct: 286 TWTCMINGYIEDGDVENALELCRLMQFEGVRPNAVTIASLVSACGDALKLNDGKCLHGWA 345
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R S+ + L+ +Y +C + ++FS S + + II G +N V +A
Sbjct: 346 IRQKVCSDIIIETSLISMYAKCKHIDLCFRVFSGASRNHTGPWSAIIAGCVQNELVRDAL 405
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+LF +M V+ I + NS++ Y
Sbjct: 406 DLFKRMRREDVEPNIATLNSLLPAY----------------------------------- 430
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN--- 297
A + LR+ IH G S LV +Y + L +A F+ I+
Sbjct: 431 -ATLADLRQTMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKD 489
Query: 298 -LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHA 356
+L G+ + NA+Q+F EM+ +TP+ T L+ACS +E G + +
Sbjct: 490 VVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFS 549
Query: 357 YAIRCGYDSDVHIG--TALVDMYAKCGSLKHARLAYKRIST----PDLVSQNAMLTAYAM 410
+ + Y + T +VD+ + G L AY I+T P A+L A
Sbjct: 550 FMLE-HYKTLARSNHYTCIVDLLGRAGRLDE---AYNLITTIPFEPTSTIWGALLAACVT 605
Query: 411 H 411
H
Sbjct: 606 H 606
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 54/117 (46%), Gaps = 3/117 (2%)
Query: 338 ILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPD 397
+L+ ++ ++ + K +H + I G S HI + L YA CG + +AR + +
Sbjct: 21 LLNHYAATQSISKTKALHCHVITGGRVSG-HILSTLSVTYALCGHIAYARKLFDEMPQSS 79
Query: 398 LVSQNAMLTAYAMHGHGKEGIAHFRRILASGFR--PDHISFLSALSACVHAGSIKTG 452
L+S N ++ Y G + I F R+++ G + PD ++ A SI G
Sbjct: 80 LLSYNIVIRMYVRDGLYHDAINVFIRMVSEGIKCVPDGYTYPFVAKAAGELKSISLG 136
>gi|280967731|gb|ACZ98537.1| PPR motif protein [Malus x domestica]
Length = 751
Score = 321 bits (823), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 196/616 (31%), Positives = 315/616 (51%), Gaps = 111/616 (18%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
N V+W+++I G+ QNG +EEAI + + M+ EG+EP TLSS L A A L L GK+ H
Sbjct: 164 NAVAWNSMIVGYVQNGLNEEAIEVFYEMREEGVEPTQVTLSSFLSASANLGALQDGKQGH 223
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
G + + L++ Y + G + A +FS+
Sbjct: 224 AIAVICGIEMTTNLGSSLINFYSKVGLIEDAESVFSRM---------------------- 261
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMR-DGIEPTSFTFGS 236
+++ +++WN +ISGYV D+A +M LMR + + S T +
Sbjct: 262 -------------LEKDVVTWNLLISGYVQIGEVDKALNMCH--LMRLENLRFDSVTLAT 306
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
++ A ADM +L+ GKE H I L+SD V ++V+MY + + + A+ F+ +
Sbjct: 307 LMSAFADMRNLKLGKEGHCYCIRNNLESDVVVVSSIVDMYAKCEKIGCARRVFNSSITKD 366
Query: 297 ---------------------NLLGKMKEDGFEPNVYTWNAMQL--------------FS 321
NL +M+ + PNV +WN++ L F
Sbjct: 367 LILWNTMLAAFAELGHSGEALNLFYQMQLESVPPNVISWNSLILGFLNSGQVNEAKDMFL 426
Query: 322 EMLSLDLTPDIYT------------------------------------VGIILSACSSL 345
+M SL + P++ T +G++L AC +L
Sbjct: 427 QMQSLGVQPNLVTWTTLISGLARSGFGYEAILTFQRMQEAGVKPNVVSIIGVLL-ACINL 485
Query: 346 ATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAML 405
A+++ G+ +H Y IR + I T+LVDMYAKCG A+ + I +L NAM+
Sbjct: 486 ASLQIGRALHGYLIRHSLYLSIPIATSLVDMYAKCGDRDQAKRVFDMIPDKELPIYNAMI 545
Query: 406 TAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFF-DLMAYYDV 464
+ +A+HG E +A +R + G +PD+I+F +AL AC HA + G E F D+++ +++
Sbjct: 546 SGFALHGQAVEALALYRCLKEEGLKPDNITFTNALYACSHAMMVSEGLELFVDMVSNHNI 605
Query: 465 KPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAAD 524
PS++HY CMV LLSR G+L EA+ I +P PD + G+LL C H +E + ++
Sbjct: 606 NPSIEHYGCMVSLLSRCGDLDEAFGLISAMPYKPDVQILGSLLAACREHNKIELEEYLSN 665
Query: 525 RLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFR 584
+L++L+P+N+GNYV ++N +A AGRW ++ + RQ MK+R + K PGCSWI+ +E++ F
Sbjct: 666 QLLKLQPDNSGNYVAMSNAYAAAGRWDEVKKVRQLMKERGLRKIPGCSWIQVGEELNVFV 725
Query: 585 ASDRSHDRSEEIYTII 600
A D+SH +EEIYT +
Sbjct: 726 AGDKSHPETEEIYTTL 741
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 131/487 (26%), Positives = 225/487 (46%), Gaps = 81/487 (16%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
N+ SW+AVIG + G+ +EA+ MQ GL P+ L +VL AC L+ + +GK H
Sbjct: 77 NVFSWAAVIGLNCRKGFYQEALLGFKEMQENGLLPDNFVLPNVLKACGGLEWIRIGKVVH 136
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
G ++ G++ + K +N V+ N++IVGY +NG
Sbjct: 137 GLVS-CGYV-------------WKMWGGGGCKKGVCGMPQRNAVAWNSMIVGYVQNGLNE 182
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
EA E+F +M +G+EPT T S
Sbjct: 183 EAIEVFYEMRE------------------------------------EGVEPTQVTLSSF 206
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
L A A++ +L+ GK+ HA+A+ G++ T +G +L+ Y + IE+ E+
Sbjct: 207 LSASANLGALQDGKQGHAIAVICGIEMTTNLGSSLINFYSK----------VGLIEDAES 256
Query: 298 LLGKMKEDGFEPNVYTWN--------------AMQLFSEMLSLDLTPDIYTVGIILSACS 343
+ +M E +V TWN A+ + M +L D T+ ++SA +
Sbjct: 257 VFSRM----LEKDVVTWNLLISGYVQIGEVDKALNMCHLMRLENLRFDSVTLATLMSAFA 312
Query: 344 SLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNA 403
+ ++ GK+ H Y IR +SDV + +++VDMYAKC + AR + T DL+ N
Sbjct: 313 DMRNLKLGKEGHCYCIRNNLESDVVVVSSIVDMYAKCEKIGCARRVFNSSITKDLILWNT 372
Query: 404 MLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYD 463
ML A+A GH E + F ++ P+ IS+ S + +++G + + F M
Sbjct: 373 MLAAFAELGHSGEALNLFYQMQLESVPPNVISWNSLILGFLNSGQVNEAKDMFLQMQSLG 432
Query: 464 VKPSLKHYTCMVDLLSRAGELGEA---YEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQ 520
V+P+L +T ++ L+R+G EA ++ +++ + P+ V +L C++ +L+ G+
Sbjct: 433 VQPNLVTWTTLISGLARSGFGYEAILTFQRMQEAGVKPNVVSIIGVLLACINLASLQIGR 492
Query: 521 IAADRLI 527
LI
Sbjct: 493 ALHGYLI 499
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 115/451 (25%), Positives = 195/451 (43%), Gaps = 82/451 (18%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y K G ++DA+ VF M E+D V+WN
Sbjct: 245 YSKVGLIEDAESVFSRMLEKDVVTWN---------------------------------- 270
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
+I G+ Q G ++A+ M M+ E L ++ TL++++ A A ++ L LGKE H Y
Sbjct: 271 --LLISGYVQIGEVDKALNMCHLMRLENLRFDSVTLATLMSAFADMRNLKLGKEGHCYCI 328
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIK----------------------- 158
RN S+ VV+ +VD+Y +C + A ++F+ K
Sbjct: 329 RNNLESDVVVVSSIVDMYAKCEKIGCARRVFNSSITKDLILWNTMLAAFAELGHSGEALN 388
Query: 159 ------------NEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYV 206
N +S N++I+G+ +G V EA+++F QM+ LGVQ +++W ++ISG
Sbjct: 389 LFYQMQLESVPPNVISWNSLILGFLNSGQVNEAKDMFLQMQSLGVQPNLVTWTTLISGLA 448
Query: 207 DNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDT 266
+ EA F+ + G++P + VL+AC ++ SL+ G+ +H I L
Sbjct: 449 RSGFGYEAILTFQR-MQEAGVKPNVVSIIGVLLACINLASLQIGRALHGYLIRHSLYLSI 507
Query: 267 FVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSL 326
+ +LV+MY + D A+ FD I + E + GF + A+ L+ +
Sbjct: 508 PIATSLVDMYAKCGDRDQAKRVFDMIPDKELPIYNAMISGFALHGQAVEALALYRCLKEE 567
Query: 327 DLTPDIYTVGIILSACSSLATMERGKQVHAYAI-RCGYDSDVHIGTALVDMYAKCGSLKH 385
L PD T L ACS + G ++ + + + +V + ++CG L
Sbjct: 568 GLKPDNITFTNALYACSHAMMVSEGLELFVDMVSNHNINPSIEHYGCMVSLLSRCGDLDE 627
Query: 386 A-----RLAYKRISTPDLVSQNAMLTAYAMH 411
A + YK PD+ ++L A H
Sbjct: 628 AFGLISAMPYK----PDVQILGSLLAACREH 654
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 141/287 (49%), Gaps = 17/287 (5%)
Query: 22 DCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGM 81
+ +SWNS++ +G V EA + +M SL + PNLV+W+ +I G ++G+ EAI
Sbjct: 401 NVISWNSLILGFLNSGQVNEAKDMFLQMQSLGVQ-PNLVTWTTLISGLARSGFGYEAILT 459
Query: 82 LFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRR 141
RMQ G++PN ++ VL AC L L +G+ HGY+ R+ + + LVD+Y +
Sbjct: 460 FQRMQEAGVKPNVVSIIGVLLACINLASLQIGRALHGYLIRHSLYLSIPIATSLVDMYAK 519
Query: 142 CGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSM 201
CGD A ++F K N +I G+ +G EA L+ ++ G++ I++ +
Sbjct: 520 CGDRDQAKRVFDMIPDKELPIYNAMISGFALHGQAVEALALYRCLKEEGLKPDNITFTNA 579
Query: 202 ISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFG---SVLIACADMNSLRKGKEIHALAI 258
+ + E +F D++ I P+ +G S+L C D++ E L
Sbjct: 580 LYACSHAMMVSEGLELFVDMVSNHNINPSIEHYGCMVSLLSRCGDLD------EAFGLIS 633
Query: 259 ALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKED 305
A+ + D + G+L+ CR + + + E + N L K++ D
Sbjct: 634 AMPYKPDVQILGSLLAA-CREHNKIELE------EYLSNQLLKLQPD 673
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 69/141 (48%), Gaps = 4/141 (2%)
Query: 322 EMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCG--YDSDVHIGTALVDMYAK 379
E+ +L + P++Y G +L C + G+Q+HA ++ G + + +I T LV YAK
Sbjct: 2 ELKNLRIGPEVY--GELLQGCVYERALHTGRQIHAQIVKKGAIFAMNEYIETKLVIFYAK 59
Query: 380 CGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSA 439
C + + + ++R+ ++ S A++ G +E + F+ + +G PD+ +
Sbjct: 60 CDNPEASNSLFRRVRLKNVFSWAAVIGLNCRKGFYQEALLGFKEMQENGLLPDNFVLPNV 119
Query: 440 LSACVHAGSIKTGSEFFDLMA 460
L AC I+ G L++
Sbjct: 120 LKACGGLEWIRIGKVVHGLVS 140
>gi|357480155|ref|XP_003610363.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511418|gb|AES92560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 734
Score = 321 bits (823), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 185/597 (30%), Positives = 304/597 (50%), Gaps = 73/597 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G + DA+K+F MPER N V
Sbjct: 162 MYCKTGFVFDARKLFDRMPER------------------------------------NTV 185
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ +I G+ + ++A+ + M+ E N L+SVL A + G++ H
Sbjct: 186 SWATMISGYASSDIADKAVEVFELMRREEEIQNEFALTSVLSALTSDVFVYTGRQVHSLA 245
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+NG ++ V N LV +Y +CG + A++ F KN
Sbjct: 246 IKNGLLAIVSVANALVTMYAKCGSLDDAVRTFEFSGDKNS-------------------- 285
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
I+W++M++GY D+A +F + G+ P+ FT V+ A
Sbjct: 286 ---------------ITWSAMVTGYAQGGDSDKALKLFNKM-HSSGVLPSEFTLVGVINA 329
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C+D+ ++ +GK++H+ A LG +V A+V+MY + L A+ F+ ++ + +L
Sbjct: 330 CSDLCAVVEGKQMHSFAFKLGFGLQLYVLSAVVDMYAKCGSLADARKGFECVQQPDVVLW 389
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G+ N + L+ +M + P+ T+ +L ACSSLA +++GKQ+HA I+
Sbjct: 390 TSIITGYVQNGDYEGGLNLYGKMQMERVIPNELTMASVLRACSSLAALDQGKQMHARIIK 449
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
G+ +V IG+AL MY KCGSL L + R+ + D++S NAM++ + +GHG + +
Sbjct: 450 YGFKLEVPIGSALSAMYTKCGSLDDGYLIFWRMPSRDVISWNAMISGLSQNGHGNKALEL 509
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMVDLLS 479
F ++L G +PD ++F++ LSAC H G + G E+F +M +++ P ++HY CMVD+LS
Sbjct: 510 FEKMLLEGIKPDPVTFVNLLSACSHMGLVDRGWEYFKMMFDEFNIAPMVEHYACMVDILS 569
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
RAG+L EA EFI+ + +W LLG C +H N E G A ++L+EL + YV+
Sbjct: 570 RAGKLNEAKEFIESATVDHGLCLWRILLGACKNHRNYELGVYAGEKLVELGSPESSAYVL 629
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEI 596
L++++ G ++ R R+ MK R ++K PGCSWIE + +H F D H + +EI
Sbjct: 630 LSSIYTALGDRENVERVRRIMKARGVNKEPGCSWIELKGLVHVFVVGDNQHPQVDEI 686
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 107/450 (23%), Positives = 205/450 (45%), Gaps = 48/450 (10%)
Query: 92 PNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKI 151
P R L L C + + G+ H I + G +S+ +V N +++Y + + AL +
Sbjct: 9 PQHRQLLQDLIECTHNKNILKGRTLHARILKTGSISSIYVTNTFLNLYAKTNHLSHALTL 68
Query: 152 FSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLY 211
F N N + +SWNS+I+ + N
Sbjct: 69 FDSI-----------------NDN----------------DKDDVSWNSLINAFSQNHSS 95
Query: 212 DE---AFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFV 268
A S+FR ++ + + P + T V A ++++ + GK+ H++A+ G D +V
Sbjct: 96 SSSSFAISLFRRMMRANNVIPNAHTLAGVFSAASNLSDVVAGKQAHSVAVKTGCSGDVYV 155
Query: 269 GGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDL 328
G +L+ MYC+ + A+ FD + + G+ + A+++F M +
Sbjct: 156 GSSLLNMYCKTGFVFDARKLFDRMPERNTVSWATMISGYASSDIADKAVEVFELMRREEE 215
Query: 329 TPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARL 388
+ + + +LSA +S + G+QVH+ AI+ G + V + ALV MYAKCGSL A
Sbjct: 216 IQNEFALTSVLSALTSDVFVYTGRQVHSLAIKNGLLAIVSVANALVTMYAKCGSLDDAVR 275
Query: 389 AYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGS 448
++ + ++ +AM+T YA G + + F ++ +SG P + + ++AC +
Sbjct: 276 TFEFSGDKNSITWSAMVTGYAQGGDSDKALKLFNKMHSSGVLPSEFTLVGVINACSDLCA 335
Query: 449 IKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEA---YEFIKKIPMAPDSVMWGA 505
+ G + L + +VD+ ++ G L +A +E +++ PD V+W +
Sbjct: 336 VVEGKQMHSFAFKLGFGLQLYVLSAVVDMYAKCGSLADARKGFECVQQ----PDVVLWTS 391
Query: 506 LLGGCVSHGNLE-----FGQIAADRLIELE 530
++ G V +G+ E +G++ +R+I E
Sbjct: 392 IITGYVQNGDYEGGLNLYGKMQMERVIPNE 421
>gi|449433085|ref|XP_004134328.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Cucumis sativus]
Length = 601
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 187/552 (33%), Positives = 284/552 (51%), Gaps = 50/552 (9%)
Query: 55 ETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGK 114
+ PN+ ++ +I + N +A F MQ +G + T +L C L + +
Sbjct: 79 QYPNVHLYNTMIRAHSHNSQPSQAFATFFAMQRDGHYADNFTFPFLLKVCTGNVWLPVIE 138
Query: 115 EFHGYITRNGFMSNPFVVNGLVDVYRRCGD--MLSALKIFSKFSIKNEV-SCNTIIVGYC 171
H I + GFMS+ FV N L+D Y +CG + +A K+F + +V S N++I G
Sbjct: 139 SVHAQIEKFGFMSDVFVPNSLIDSYSKCGSCGISAAKKLFVSMGARRDVVSWNSMISGLA 198
Query: 172 ENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTS 231
+ G EAR++FD+M ++ ISWN+M+ GYV D+AF +F ++ R+ + ++
Sbjct: 199 KGGLYEEARKVFDEMP----EKDGISWNTMLDGYVKVGKMDDAFKLFDEMPERNVVSWST 254
Query: 232 FTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDE 291
G YC+ D+ A+M FD+
Sbjct: 255 MVLG----------------------------------------YCKAGDMEMARMLFDK 274
Query: 292 IENIENLLG-KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMER 350
+ ++NL+ + GF A+ LF +M L D TV IL+AC+ +
Sbjct: 275 MP-VKNLVSWTIIVSGFAEKGLAREAISLFDQMEKACLKLDNGTVMSILAACAESGLLGL 333
Query: 351 GKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAM 410
G+++HA + I ALVDMYAKCG L A + I D+VS NAML AM
Sbjct: 334 GEKIHASIKNNNFKCTTEISNALVDMYAKCGRLNIAYDVFNDIKNKDVVSWNAMLQGLAM 393
Query: 411 HGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLK 469
HGHG + + F+R+ GF P+ ++ + L AC HAG I G +F M Y + P ++
Sbjct: 394 HGHGVKALELFKRMKEEGFSPNKVTMIGVLCACTHAGLIDDGIRYFSTMERDYTLVPEVE 453
Query: 470 HYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIEL 529
HY CMVDLL R G L EA I+ +PMAP++++WG LLG C H +E + D L+EL
Sbjct: 454 HYGCMVDLLGRKGRLEEAIRLIRNMPMAPNAIIWGTLLGACRMHNAVELAREVLDHLVEL 513
Query: 530 EPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRS 589
EP ++GN+ ML+N++A AG W+ +A TR +M+ K G S IE +E+H+F DRS
Sbjct: 514 EPTDSGNFSMLSNIYAAAGDWNCVANTRLRMRSIGTKKPSGASSIEVNNEVHEFTVFDRS 573
Query: 590 HDRSEEIYTIID 601
H +S+ IY +I+
Sbjct: 574 HPKSDNIYQVIN 585
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 131/284 (46%), Gaps = 37/284 (13%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y K G +DDA K+F MPER+ VSW+++V G + A ++M NLVS
Sbjct: 228 YVKVGKMDDAFKLFDEMPERNVVSWSTMVLGYCKAGDMEMARMLFDKMP-----VKNLVS 282
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W+ ++ GF + G EAI + +M+ L+ + T+ S+L ACA L LG++ H I
Sbjct: 283 WTIIVSGFAEKGLAREAISLFDQMEKACLKLDNGTVMSILAACAESGLLGLGEKIHASIK 342
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
N F + N LVD+Y +CG + A +F+ K+ VS N ++ G +G+ +A E
Sbjct: 343 NNNFKCTTEISNALVDMYAKCGRLNIAYDVFNDIKNKDVVSWNAMLQGLAMHGHGVKALE 402
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFR-------------------DLL 222
LF +M+ G ++ ++ L D+ F DLL
Sbjct: 403 LFKRMKEEGFSPNKVTMIGVLCACTHAGLIDDGIRYFSTMERDYTLVPEVEHYGCMVDLL 462
Query: 223 MRDG-------------IEPTSFTFGSVLIACADMNSLRKGKEI 253
R G + P + +G++L AC N++ +E+
Sbjct: 463 GRKGRLEEAIRLIRNMPMAPNAIIWGTLLGACRMHNAVELAREV 506
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 126/296 (42%), Gaps = 43/296 (14%)
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
S L C ++N + K++HA + L D FV L+ + + ++ A AF++++
Sbjct: 25 SDLHKCTNLNQV---KQLHAQILKSNLHVDLFVVPKLISAFSLCRQMLLATNAFNQVQ-- 79
Query: 296 ENLLGKMKEDGFEPNVYTWNAM-----------QLFSEMLSLDLT---PDIYTVGIILSA 341
PNV+ +N M Q F+ ++ D +T +L
Sbjct: 80 ------------YPNVHLYNTMIRAHSHNSQPSQAFATFFAMQRDGHYADNFTFPFLLKV 127
Query: 342 CSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSL---KHARLAYKRISTPDL 398
C+ + + VHA + G+ SDV + +L+D Y+KCGS +L + D+
Sbjct: 128 CTGNVWLPVIESVHAQIEKFGFMSDVFVPNSLIDSYSKCGSCGISAAKKLFVSMGARRDV 187
Query: 399 VSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDL 458
VS N+M++ A G +E R++ D IS+ + L V G + + FD
Sbjct: 188 VSWNSMISGLAKGGLYEEA----RKVFDEMPEKDGISWNTMLDGYVKVGKMDDAFKLFDE 243
Query: 459 MAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
M +V ++ MV +AG++ A K+P+ + V W ++ G G
Sbjct: 244 MPERNVVS----WSTMVLGYCKAGDMEMARMLFDKMPVK-NLVSWTIIVSGFAEKG 294
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 75/191 (39%), Gaps = 38/191 (19%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG L+ A VF + +D VSWN+++ A +G ++ALE +RM
Sbjct: 359 MYAKCGRLNIAYDVFNDIKNKDVVSWNAMLQGLAMHGHGVKALELFKRM----------- 407
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+ EG PN T+ VL AC + G + +
Sbjct: 408 -------------------------KEEGFSPNKVTMIGVLCACTHAGLIDDGIRYFSTM 442
Query: 121 TRNGFMSNPFVVNG-LVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE- 178
R+ + G +VD+ R G + A+++ + ++G C N E
Sbjct: 443 ERDYTLVPEVEHYGCMVDLLGRKGRLEEAIRLIRNMPMAPNAIIWGTLLGACRMHNAVEL 502
Query: 179 ARELFDQMEHL 189
ARE+ D + L
Sbjct: 503 AREVLDHLVEL 513
Score = 46.2 bits (108), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 77/198 (38%), Gaps = 14/198 (7%)
Query: 339 LSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDL 398
LS + + KQ+HA ++ D+ + L+ ++ C + A A+ ++ P++
Sbjct: 24 LSDLHKCTNLNQVKQLHAQILKSNLHVDLFVVPKLISAFSLCRQMLLATNAFNQVQYPNV 83
Query: 399 VSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVH------AGSIKTG 452
N M+ A++ + + A F + G D+ +F L C S+
Sbjct: 84 HLYNTMIRAHSHNSQPSQAFATFFAMQRDGHYADNFTFPFLLKVCTGNVWLPVIESVHAQ 143
Query: 453 SEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELG--EAYEFIKKIPMAPDSVMWGALLGGC 510
E F M+ V SL +D S+ G G A + + D V W +++ G
Sbjct: 144 IEKFGFMSDVFVPNSL------IDSYSKCGSCGISAAKKLFVSMGARRDVVSWNSMISGL 197
Query: 511 VSHGNLEFGQIAADRLIE 528
G E + D + E
Sbjct: 198 AKGGLYEEARKVFDEMPE 215
>gi|255584337|ref|XP_002532904.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527338|gb|EEF29484.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 181/549 (32%), Positives = 283/549 (51%), Gaps = 47/549 (8%)
Query: 55 ETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGK 114
+ PN+ ++ +I QN +A F MQ GL + T +L AC L +
Sbjct: 82 QDPNVHLYNTLIRAHVQNSQSLKAFATFFDMQKNGLFADNFTYPFLLKACNGKGWLPTVQ 141
Query: 115 EFHGYITRNGFMSNPFVVNGLVDVYRRCG--DMLSALKIFSKFSIKNEVSCNTIIVGYCE 172
H ++ + GF + FV N L+D Y +CG + A+K+F + K+ VS N++I G +
Sbjct: 142 MIHCHVEKYGFFGDLFVPNSLIDSYSKCGLLGVNYAMKLFMEMGEKDLVSWNSMIGGLVK 201
Query: 173 NGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSF 232
G++ AR+LFD+M +R +SWN+++ GYV +AF++F + R+ + ++
Sbjct: 202 AGDLGRARKLFDEM----AERDAVSWNTILDGYVKAGEMSQAFNLFEKMPERNVVSWSTM 257
Query: 233 TFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI 292
G YC+ D+ A+M FD++
Sbjct: 258 VSG----------------------------------------YCKTGDMEMARMLFDKM 277
Query: 293 ENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGK 352
+ + GF A L+++M + L PD T+ IL+AC+ + GK
Sbjct: 278 PFKNLVTWTIIISGFAEKGLAKEATTLYNQMEAAGLKPDDGTLISILAACAESGLLVLGK 337
Query: 353 QVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHG 412
+VHA + V++ ALVDMYAKCG + A + +S DLVS N ML AMHG
Sbjct: 338 KVHASIKKIRIKCSVNVSNALVDMYAKCGRVDKALSIFNEMSMRDLVSWNCMLQGLAMHG 397
Query: 413 HGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHY 471
HG++ I F ++ GF+PD ++ ++ L AC HAG + G +F+ M + + P ++HY
Sbjct: 398 HGEKAIQLFSKMQQEGFKPDKVTLIAILCACTHAGFVDQGLSYFNSMERDHGIVPHIEHY 457
Query: 472 TCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEP 531
CM+DLL R G L EA+ ++ +PM P+ V+WG LLG C H + + DRLI LE
Sbjct: 458 GCMIDLLGRGGRLEEAFRLVQSMPMEPNDVIWGTLLGACRVHNAVPLAEKVLDRLITLEQ 517
Query: 532 NNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHD 591
++ GNY ML+N+FA AG W+ +A R +MK + K G S IE DE+H+F D+SH
Sbjct: 518 SDPGNYSMLSNIFAAAGDWNSVANMRLQMKSTGVQKPSGASSIELDDEVHEFTVFDKSHP 577
Query: 592 RSEEIYTII 600
+++IY I+
Sbjct: 578 ETDKIYQIL 586
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 149/297 (50%), Gaps = 10/297 (3%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y K G + A +F+ MPER+ VSW+++V+ G + A ++M NLV+
Sbjct: 230 YVKAGEMSQAFNLFEKMPERNVVSWSTMVSGYCKTGDMEMARMLFDKMP-----FKNLVT 284
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W+ +I GF + G +EA + +M+A GL+P+ TL S+L ACA L LGK+ H I
Sbjct: 285 WTIIISGFAEKGLAKEATTLYNQMEAAGLKPDDGTLISILAACAESGLLVLGKKVHASIK 344
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
+ + V N LVD+Y +CG + AL IF++ S+++ VS N ++ G +G+ +A +
Sbjct: 345 KIRIKCSVNVSNALVDMYAKCGRVDKALSIFNEMSMRDLVSWNCMLQGLAMHGHGEKAIQ 404
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
LF +M+ G + ++ +++ D+ S F + GI P +G ++
Sbjct: 405 LFSKMQQEGFKPDKVTLIAILCACTHAGFVDQGLSYFNSMERDHGIVPHIEHYGCMIDLL 464
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVA-AQMAFDEIENIEN 297
L +E L ++ ++ + + G L+ CR + V A+ D + +E
Sbjct: 465 GRGGRL---EEAFRLVQSMPMEPNDVIWGTLLGA-CRVHNAVPLAEKVLDRLITLEQ 517
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 92/215 (42%), Gaps = 4/215 (1%)
Query: 352 KQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMH 411
K+VHA I+ +D+++ L+ ++ C + A + +I P++ N ++ A+ +
Sbjct: 40 KEVHAQIIKRNLHNDLYVAPKLISAFSLCHQMNLAVNVFNQIQDPNVHLYNTLIRAHVQN 99
Query: 412 GHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHY 471
+ A F + +G D+ ++ L AC G + T + Y L
Sbjct: 100 SQSLKAFATFFDMQKNGLFADNFTYPFLLKACNGKGWLPTVQMIHCHVEKYGFFGDLFVP 159
Query: 472 TCMVDLLSRAGELGEAYEFIKKIPMA-PDSVMWGALLGGCVSHGNLEFGQIAADRLIELE 530
++D S+ G LG Y + M D V W +++GG V G+L + D + E
Sbjct: 160 NSLIDSYSKCGLLGVNYAMKLFMEMGEKDLVSWNSMIGGLVKAGDLGRARKLFDEMAE-- 217
Query: 531 PNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRM 565
+ ++ + + + AG S +KM +R +
Sbjct: 218 -RDAVSWNTILDGYVKAGEMSQAFNLFEKMPERNV 251
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 81/189 (42%), Gaps = 40/189 (21%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG +D A +F M RD VSWN C GL +
Sbjct: 361 MYAKCGRVDKALSIFNEMSMRDLVSWN-----CMLQGLAM-------------------- 395
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+G+ E+AI + +MQ EG +P+ TL ++L AC + G + +
Sbjct: 396 -----------HGHGEKAIQLFSKMQQEGFKPDKVTLIAILCACTHAGFVDQGLSYFNSM 444
Query: 121 TRN-GFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIK-NEVSCNTIIVGYCENGN-VA 177
R+ G + + ++D+ R G + A ++ ++ N+V T++ G C N V
Sbjct: 445 ERDHGIVPHIEHYGCMIDLLGRGGRLEEAFRLVQSMPMEPNDVIWGTLL-GACRVHNAVP 503
Query: 178 EARELFDQM 186
A ++ D++
Sbjct: 504 LAEKVLDRL 512
>gi|356558562|ref|XP_003547574.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Glycine max]
Length = 846
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 199/598 (33%), Positives = 309/598 (51%), Gaps = 73/598 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG+L DA+K+F MP+ D V+W NGL
Sbjct: 290 MYSKCGNLFDARKLFNTMPQTDTVTW---------NGL---------------------- 318
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
I G+ QNG+ +EA + M + G++P++ T +S LP+ L KE H YI
Sbjct: 319 -----IAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYI 373
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R+ + ++ + L+D+Y + GD+ A KIF + ++ + C
Sbjct: 374 VRHRVPFDVYLKSALIDIYFKGGDVEMARKIFQQNTLVDVAVCT---------------- 417
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+MISGYV + L +A + FR L+++G+ P S T SVL A
Sbjct: 418 -------------------AMISGYVLHGLNIDAINTFR-WLIQEGMVPNSLTMASVLPA 457
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA + +L+ GKE+H + L++ VG A+ +MY + L A F + +++
Sbjct: 458 CAALAALKLGKELHCDILKKQLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSETDSICW 517
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
F N A+ LF +M D ++ LS+ ++L + GK++H Y IR
Sbjct: 518 NSMISSFSQNGKPEMAVDLFRQMGMSGAKFDSVSLSSALSSAANLPALYYGKEMHGYVIR 577
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
+ SD + +AL+DMY+KCG L AR + ++ + VS N+++ AY HG +E +
Sbjct: 578 NAFSSDTFVASALIDMYSKCGKLALARCVFNLMAGKNEVSWNSIIAAYGNHGCARECLDL 637
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLS 479
F +L +G PDH++FL +SAC HAG + G +F M Y + ++HY CMVDL
Sbjct: 638 FHEMLRAGVHPDHVTFLVIISACGHAGLVGEGIHYFHCMTREYGIGARMEHYACMVDLYG 697
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
RAG L EA++ IK +P PD+ +WG LLG C HGN+E ++A+ L+EL+P N+G YV+
Sbjct: 698 RAGRLHEAFDAIKSMPFTPDAGVWGTLLGACRLHGNVELAKLASRHLLELDPKNSGYYVL 757
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
L+N+ A AG W + + R+ MK++ + K PG SWI+ H F A++ +H S EIY
Sbjct: 758 LSNVHADAGEWGSVLKVRRLMKEKGVQKIPGYSWIDVNGGTHMFSAAEGNHPESVEIY 815
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 125/492 (25%), Positives = 215/492 (43%), Gaps = 44/492 (8%)
Query: 32 ACAANGLVLEALECLERMSSLDN-----ETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQ 86
CA + VL R+S N E N + W+ +I G G+ + A+ F+M
Sbjct: 78 VCALSSRVLGLYVLCGRISDGGNLFFGLELCNALPWNWMIRGLYMLGWFDFALLFYFKML 137
Query: 87 AEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDML 146
+ P+ T V+ AC L + L H GF + FV + L+ +Y
Sbjct: 138 GSNVSPDKYTFPYVIKACGGLNNVPLCMVVHNTARSLGFHVDLFVGSALIKLY------- 190
Query: 147 SALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYV 206
+NG + +AR +FD++ QR I WN M+ GYV
Sbjct: 191 ------------------------ADNGYICDARRVFDELP----QRDTILWNVMLHGYV 222
Query: 207 DNSLYDEAFSMFRDLLMRDGIE-PTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSD 265
+ ++ A F MR S T+ +L CA G ++H L I G + D
Sbjct: 223 KSGDFNNAMGTFCG--MRTSYSMVNSVTYTCILSICATRGKFCLGTQVHGLVIGSGFEFD 280
Query: 266 TFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLS 325
V LV MY + +L A+ F+ + + + G+ N +T A LF+ M+S
Sbjct: 281 PQVANTLVAMYSKCGNLFDARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMIS 340
Query: 326 LDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKH 385
+ PD T L + ++ K+VH+Y +R DV++ +AL+D+Y K G ++
Sbjct: 341 AGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDIYFKGGDVEM 400
Query: 386 ARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVH 445
AR +++ + D+ AM++ Y +HG + I FR ++ G P+ ++ S L AC
Sbjct: 401 ARKIFQQNTLVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVPNSLTMASVLPACAA 460
Query: 446 AGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGA 505
++K G E + ++ + + + D+ ++ G L AYEF +++ DS+ W +
Sbjct: 461 LAALKLGKELHCDILKKQLENIVNVGSAITDMYAKCGRLDLAYEFFRRMS-ETDSICWNS 519
Query: 506 LLGGCVSHGNLE 517
++ +G E
Sbjct: 520 MISSFSQNGKPE 531
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 121/488 (24%), Positives = 235/488 (48%), Gaps = 42/488 (8%)
Query: 27 NSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQ 86
++++ A NG + +A + + D + W+ ++ G+ ++G A+G M+
Sbjct: 184 SALIKLYADNGYICDARRVFDELPQRDT-----ILWNVMLHGYVKSGDFNNAMGTFCGMR 238
Query: 87 AEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDML 146
N+ T + +L CA K LG + HG + +GF +P V N LV +Y +CG++
Sbjct: 239 TSYSMVNSVTYTCILSICATRGKFCLGTQVHGLVIGSGFEFDPQVANTLVAMYSKCGNLF 298
Query: 147 SALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYV 206
A K+F+ + V+ N +I GY +NG EA LF N+MIS
Sbjct: 299 DARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLF---------------NAMISA-- 341
Query: 207 DNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDT 266
G++P S TF S L + + SLR KE+H+ + + D
Sbjct: 342 -------------------GVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDV 382
Query: 267 FVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSL 326
++ AL+++Y + D+ A+ F + ++ + G+ + +A+ F ++
Sbjct: 383 YLKSALIDIYFKGGDVEMARKIFQQNTLVDVAVCTAMISGYVLHGLNIDAINTFRWLIQE 442
Query: 327 DLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHA 386
+ P+ T+ +L AC++LA ++ GK++H ++ ++ V++G+A+ DMYAKCG L A
Sbjct: 443 GMVPNSLTMASVLPACAALAALKLGKELHCDILKKQLENIVNVGSAITDMYAKCGRLDLA 502
Query: 387 RLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHA 446
++R+S D + N+M+++++ +G + + FR++ SG + D +S SALS+ +
Sbjct: 503 YEFFRRMSETDSICWNSMISSFSQNGKPEMAVDLFRQMGMSGAKFDSVSLSSALSSAANL 562
Query: 447 GSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGAL 506
++ G E + + ++D+ S+ G+L A + + + V W ++
Sbjct: 563 PALYYGKEMHGYVIRNAFSSDTFVASALIDMYSKCGKLALA-RCVFNLMAGKNEVSWNSI 621
Query: 507 LGGCVSHG 514
+ +HG
Sbjct: 622 IAAYGNHG 629
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/403 (24%), Positives = 188/403 (46%), Gaps = 17/403 (4%)
Query: 123 NGFMSNP----FVVNGLVDVYRRCGD---MLSALKIFSKF---SIKNEVSCNTIIVG-YC 171
N MS P ++ L ++R C D + A ++ ++ + + + ++ ++G Y
Sbjct: 31 NNVMSKPETQDYLTTQLESLFRACSDASVVQQARQVHTQIIVGGMSDVCALSSRVLGLYV 90
Query: 172 ENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTS 231
G +++ LF +E + WN MI G +D A +F ++ + P
Sbjct: 91 LCGRISDGGNLFFGLELCNA----LPWNWMIRGLYMLGWFDFAL-LFYFKMLGSNVSPDK 145
Query: 232 FTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDE 291
+TF V+ AC +N++ +H A +LG D FVG AL+++Y + A+ FDE
Sbjct: 146 YTFPYVIKACGGLNNVPLCMVVHNTARSLGFHVDLFVGSALIKLYADNGYICDARRVFDE 205
Query: 292 IENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG 351
+ + +L + G+ + NAM F M + + T ILS C++ G
Sbjct: 206 LPQRDTILWNVMLHGYVKSGDFNNAMGTFCGMRTSYSMVNSVTYTCILSICATRGKFCLG 265
Query: 352 KQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMH 411
QVH I G++ D + LV MY+KCG+L AR + + D V+ N ++ Y +
Sbjct: 266 TQVHGLVIGSGFEFDPQVANTLVAMYSKCGNLFDARKLFNTMPQTDTVTWNGLIAGYVQN 325
Query: 412 GHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHY 471
G E F ++++G +PD ++F S L + + +GS++ E + + V +
Sbjct: 326 GFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLK 385
Query: 472 TCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
+ ++D+ + G++ A + ++ + D + A++ G V HG
Sbjct: 386 SALIDIYFKGGDVEMARKIFQQNTLV-DVAVCTAMISGYVLHG 427
>gi|449523219|ref|XP_004168621.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 755
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 177/614 (28%), Positives = 307/614 (50%), Gaps = 86/614 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KCG ++ A KVF +P R N+
Sbjct: 108 VYSKCGVMESAHKVFDNLPRR------------------------------------NVN 131
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+ ++ G+ QN + A+ + +M G P+ TL VL AC+ LQ + GK+ H Y+
Sbjct: 132 AWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHAYL 191
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ + + N L Y + + A+K F
Sbjct: 192 IKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIK------------------------ 227
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
++ +ISW S+IS DN + S F D+L DG++P +T SVL A
Sbjct: 228 -----------EKDVISWTSVISSCCDNGQAARSLSFFMDML-SDGMKPNEYTLTSVLSA 275
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C M +L G +IH+L+I LG S + +++ +Y + L+ AQ F+ +E + NL+
Sbjct: 276 CCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETL-NLVT 334
Query: 301 ------------KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATM 348
+ ED + A+ +F ++ + PD++T +LS CS+L +
Sbjct: 335 WNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVAL 394
Query: 349 ERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAY 408
E+G+Q+H I+ G +DV +GTALV MY KCGS+ A A+ + + ++S +M+T +
Sbjct: 395 EQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGF 454
Query: 409 AMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPS 467
A HG ++ + F + G +P+ ++F+ LSAC HAG +F+LM Y++KP
Sbjct: 455 ARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLADEALYYFELMQKQYNIKPV 514
Query: 468 LKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLI 527
+ H+ C++D+ R G + EA++ + K+ P+ +W L+ GC SHG + G AA++L+
Sbjct: 515 MDHFACLIDMYLRLGRVEEAFDVVHKMNFEPNETIWSMLIAGCRSHGKSDLGFYAAEQLL 574
Query: 528 ELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASD 587
+L+P + YV L N+ AGRW D+++ R+ MK+ ++ K SWI +++++ F+ +D
Sbjct: 575 KLKPKDVETYVSLLNMHISAGRWKDVSKVRKLMKEEKVGKLKDWSWISIKEKVYSFKPND 634
Query: 588 RSHDRSEEIYTIID 601
+SH +S E+Y +++
Sbjct: 635 KSHCQSLEMYKLLE 648
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 141/300 (47%), Gaps = 1/300 (0%)
Query: 226 GIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAA 285
G S + +L C D N + + IH + G D FV LV +Y + + +A
Sbjct: 59 GTRIESSYYFPLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESA 118
Query: 286 QMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSL 345
FD + G+ N + A+QLF +ML P YT+GI+L+ACSSL
Sbjct: 119 HKVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSL 178
Query: 346 ATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAML 405
++E GKQVHAY I+ D D IG +L Y+K L+ A A+K I D++S +++
Sbjct: 179 QSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVI 238
Query: 406 TAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVK 465
++ +G ++ F +L+ G +P+ + S LSAC ++ G++ L
Sbjct: 239 SSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYG 298
Query: 466 PSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADR 525
S+ ++ L + G L EA + + + + V W A++ G +L +AA +
Sbjct: 299 SSILIKNSIMYLYLKCGWLIEAQKLFEGMETL-NLVTWNAMIAGHAKMMDLAEDDVAAHK 357
>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
Length = 705
Score = 321 bits (822), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 179/527 (33%), Positives = 289/527 (54%), Gaps = 43/527 (8%)
Query: 85 MQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGD 144
M+ +E ++ + SVL AC+++ +GKE HG+ +NG +S+ FVVN L+ +Y CG
Sbjct: 100 MRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQMYSECGS 159
Query: 145 MLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISG 204
++SA +F K S ++ VS +T+I Y LF QR I+SW +MI+G
Sbjct: 160 LVSARLLFDKMSERDVVSWSTMIRAYI---------TLFYGFS----QRSIVSWTAMIAG 206
Query: 205 YVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQS 264
Y+ + +E +F ++ + + P T S++I+C + +++ GK +HA + G
Sbjct: 207 YIRCNDLEEGERLFVRMI-EENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGM 265
Query: 265 DTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAM------- 317
+ ALV+MY + ++ +A+ FD ++N +V TW AM
Sbjct: 266 SLALATALVDMYGKCGEIRSARAIFDSMKN--------------KDVMTWTAMISAYAQA 311
Query: 318 -------QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIG 370
QLF +M + P+ T+ +LS C+ ++ GK HAY + G + DV +
Sbjct: 312 NCIDYAFQLFVQMRDNGVRPNELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILK 371
Query: 371 TALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFR 430
TAL+DMYAKCG + A+ + D+ + N M+ Y MHG+G++ + F + G +
Sbjct: 372 TALIDMYAKCGDISGAQRLFSEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVK 431
Query: 431 PDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYE 489
P+ I+F+ AL AC HAG + G F+ M + + + P ++HY CMVDLL RAG L EAY+
Sbjct: 432 PNDITFIGALHACSHAGLVVEGKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYK 491
Query: 490 FIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGR 549
I+ +P+ P+ +WGA+L C H N G++AA L+ LEP N G V+++N++A A R
Sbjct: 492 MIESMPVTPNIAIWGAMLAACKIHKNSNMGELAARELLALEPQNCGYKVLMSNIYAAANR 551
Query: 550 WSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEI 596
W+D+A R+ +KD + K PG S IE +H F+ D +H E+I
Sbjct: 552 WNDVAGMRKAVKDTGIKKEPGMSSIEVNGLVHDFKMGDTAHPLIEKI 598
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 124/431 (28%), Positives = 191/431 (44%), Gaps = 58/431 (13%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +CGSL A+ +F M ERD VSW++++ A + + S +V
Sbjct: 153 MYSECGSLVSARLLFDKMSERDVVSWSTMIRA------YITLFYGFSQRS--------IV 198
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A+I G+ + EE + RM E + PN T+ S++ +C + + LGK H YI
Sbjct: 199 SWTAMIAGYIRCNDLEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYI 258
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
RNGF + + LVD+Y +CG++ SA IF K+ ++ +I Y + + A
Sbjct: 259 LRNGFGMSLALATALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAF 318
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+LF QM RD +G+ P T S+L
Sbjct: 319 QLFVQM--------------------------------RD----NGVRPNELTMVSLLSL 342
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA +L GK HA G++ D + AL++MY + D+ AQ F E + +
Sbjct: 343 CAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFSEAIDRDICTW 402
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
+ G+ + Y A++LF+EM +L + P+ T L ACS + GK + I
Sbjct: 403 NVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACSHAGLVVEGKGLFEKMIH 462
Query: 361 -CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS----TPDLVSQNAMLTAYAMHGHGK 415
G V +VD+ + G L AYK I TP++ AML A +H +
Sbjct: 463 DFGLVPKVEHYGCMVDLLGRAGLLDE---AYKMIESMPVTPNIAIWGAMLAACKIHKNSN 519
Query: 416 EGIAHFRRILA 426
G R +LA
Sbjct: 520 MGELAARELLA 530
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 102/216 (47%), Gaps = 23/216 (10%)
Query: 316 AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVD 375
A+ ++ M LD+ D + + +L ACS ++ GK++H ++++ G SDV + AL+
Sbjct: 93 ALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQ 152
Query: 376 MYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHG--------------------- 414
MY++CGSL ARL + ++S D+VS + M+ AY +G
Sbjct: 153 MYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCND 212
Query: 415 -KEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTC 473
+EG F R++ P+ I+ LS + +C G+++ G + SL T
Sbjct: 213 LEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLALATA 272
Query: 474 MVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
+VD+ + GE+ A + D + W A++
Sbjct: 273 LVDMYGKCGEIRSARAIFDSMK-NKDVMTWTAMISA 307
>gi|297740913|emb|CBI31095.3| unnamed protein product [Vitis vinifera]
Length = 768
Score = 321 bits (822), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 198/668 (29%), Positives = 325/668 (48%), Gaps = 83/668 (12%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGL--VLEALECLERMSS------LD 53
Y K L+DA +F MPER+ VSWN++++A NG L +EC R LD
Sbjct: 81 YCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGACGALVDVECGRRCHGISIKIGLD 140
Query: 54 NET----------------------------PNLVSWSAVIGGFTQNGYDEEAIGMLFRM 85
N PN VS++A++GG + EA + M
Sbjct: 141 NNIYVGNALLGMYAKCRCIGDAIQAFGDVPEPNEVSFTAMMGGLADSDQVNEAFRLFRLM 200
Query: 86 QAEGLEPNARTLSSVLPACAR--------------LQKLSLGKEFHGYITRNGFMSNPFV 131
+ ++ +LSSVL C+R L G++ H ++GF S+ +
Sbjct: 201 LRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSDVHGQQVHCLTIKHGFESDLHL 260
Query: 132 VNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLG- 190
N L+D+Y + G+M SA IF + VS N +I GY + ++A E +M++ G
Sbjct: 261 NNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQKSQSSKAIEYLQRMQYHGF 320
Query: 191 --------------VQRGII----------------SWNSMISGYVDNSLYDEAFSMFRD 220
++ G I SWN+++SGY N + EA +FR+
Sbjct: 321 EPDEITYVNMLVACIKSGDIEAGRQMFDGMSSPSLSSWNTILSGYSQNENHKEAVKLFRE 380
Query: 221 LLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQ 280
+ R + P T +L + A M L G+++HA++ ++D ++ L+ MY +
Sbjct: 381 MQFR-SVHPDRTTLAIILSSLAGMMLLEGGRQVHAVSQKAVFRTDIYLASGLIGMYSKCG 439
Query: 281 DLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILS 340
+ A+ FD I ++ + G N A F +M + P ++ +LS
Sbjct: 440 KVEMAKRIFDRIAELDIVCWNSMMAGLSLNSLDKEAFTFFKKMREKGMFPSQFSYATVLS 499
Query: 341 ACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVS 400
C+ L+++ +G+QVH+ R GY +D +G+AL+DMY+KCG + AR + + + V+
Sbjct: 500 CCAKLSSLSQGRQVHSQIAREGYMNDAFVGSALIDMYSKCGDVDAARWVFDMMLGKNTVT 559
Query: 401 QNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA 460
N M+ YA +G G E + + ++ SG +PD I+F++ L+AC H+G + TG + F+ M
Sbjct: 560 WNEMIHGYAQNGCGDEAVLLYEDMIGSGEKPDGITFVAVLTACSHSGLVDTGIKIFNSMQ 619
Query: 461 Y-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFG 519
+ V+P + HYTC++D L RAG L EA I K+P D ++W LL C + ++
Sbjct: 620 QEHGVEPLVDHYTCIIDSLGRAGRLHEAEVLIDKMPCKYDPIIWEVLLSSCRVYADVSLA 679
Query: 520 QIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDE 579
+ AA+ L L+P N+ YV+LAN+++ GRW D R+ M ++ K PG SWIE ++
Sbjct: 680 RRAAEELFHLDPQNSAPYVLLANIYSSLGRWDDAKAVRELMSYNQVVKDPGYSWIEHKNG 739
Query: 580 IHKFRASD 587
+ F D
Sbjct: 740 MQAFMVDD 747
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 136/596 (22%), Positives = 249/596 (41%), Gaps = 157/596 (26%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTA-CAANGLVLEALECLERMSSLDNETP--N 58
Y KC ++D ++++F MP+RD +WN+++ A C A+ LE L E P N
Sbjct: 50 YAKCNAIDASRRLFDQMPKRDIYTWNAILGAYCKASE--------LEDAHVLFAEMPERN 101
Query: 59 LVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHG 118
+VSW+ +I T+NG AC L + G+ HG
Sbjct: 102 IVSWNTLISALTRNG-----------------------------ACGALVDVECGRRCHG 132
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
+ G +N +V N L+ +Y +C + A++ F NEVS ++ G ++ V
Sbjct: 133 ISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGDVPEPNEVSFTAMMGGLADSDQV-- 190
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
+EAF +FR L++R+ I S + SVL
Sbjct: 191 ---------------------------------NEAFRLFR-LMLRNRIHVDSVSLSSVL 216
Query: 239 IACAD--------------MNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVA 284
C+ ++S G+++H L I G +SD + +L++MY + ++ +
Sbjct: 217 GVCSRGGCGEFGLHDSNDVLSSDVHGQQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDS 276
Query: 285 AQMAFDEIENIE---------------------NLLGKMKEDGFEPNVYT---------- 313
A+M F + + L +M+ GFEP+ T
Sbjct: 277 AEMIFVNMPEVSVVSWNVMIAGYGQKSQSSKAIEYLQRMQYHGFEPDEITYVNMLVACIK 336
Query: 314 ---------------------WN--------------AMQLFSEMLSLDLTPDIYTVGII 338
WN A++LF EM + PD T+ II
Sbjct: 337 SGDIEAGRQMFDGMSSPSLSSWNTILSGYSQNENHKEAVKLFREMQFRSVHPDRTTLAII 396
Query: 339 LSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDL 398
LS+ + + +E G+QVHA + + + +D+++ + L+ MY+KCG ++ A+ + RI+ D+
Sbjct: 397 LSSLAGMMLLEGGRQVHAVSQKAVFRTDIYLASGLIGMYSKCGKVEMAKRIFDRIAELDI 456
Query: 399 VSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDL 458
V N+M+ +++ KE F+++ G P S+ + LS C S+ G +
Sbjct: 457 VCWNSMMAGLSLNSLDKEAFTFFKKMREKGMFPSQFSYATVLSCCAKLSSLSQGRQVHSQ 516
Query: 459 MAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
+A + ++D+ S+ G++ +A ++ + + ++V W ++ G +G
Sbjct: 517 IAREGYMNDAFVGSALIDMYSKCGDV-DAARWVFDMMLGKNTVTWNEMIHGYAQNG 571
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 110/448 (24%), Positives = 204/448 (45%), Gaps = 55/448 (12%)
Query: 90 LEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSAL 149
+E L+S+L C + GK H ++ R+ + F+ N L++ Y +C + ++
Sbjct: 1 METKTTYLASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASR 60
Query: 150 KIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNS 209
++F + ++ + N I+ YC+ + +A LF +M +R I+SWN++IS
Sbjct: 61 RLFDQMPKRDIYTWNAILGAYCKASELEDAHVLFAEMP----ERNIVSWNTLISA----- 111
Query: 210 LYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVG 269
L R+G AC + + G+ H ++I +GL ++ +VG
Sbjct: 112 ------------LTRNG-------------ACGALVDVECGRRCHGISIKIGLDNNIYVG 146
Query: 270 GALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLT 329
AL+ MY + + + A AF ++ + G + A +LF ML +
Sbjct: 147 NALLGMYAKCRCIGDAIQAFGDVPEPNEVSFTAMMGGLADSDQVNEAFRLFRLMLRNRIH 206
Query: 330 PDIYTVGIILSACSS--------------LATMERGKQVHAYAIRCGYDSDVHIGTALVD 375
D ++ +L CS L++ G+QVH I+ G++SD+H+ +L+D
Sbjct: 207 VDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSDVHGQQVHCLTIKHGFESDLHLNNSLLD 266
Query: 376 MYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHIS 435
MYAK G++ A + + + +VS N M+ Y + I + +R+ GF PD I+
Sbjct: 267 MYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQKSQSSKAIEYLQRMQYHGFEPDEIT 326
Query: 436 FLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKI- 494
+++ L AC+ +G I+ G + FD M+ PSL + ++ S+ EA + +++
Sbjct: 327 YVNMLVACIKSGDIEAGRQMFDGMS----SPSLSSWNTILSGYSQNENHKEAVKLFREMQ 382
Query: 495 --PMAPDSVMWGALLGGCVSHGNLEFGQ 520
+ PD +L LE G+
Sbjct: 383 FRSVHPDRTTLAIILSSLAGMMLLEGGR 410
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 105/424 (24%), Positives = 193/424 (45%), Gaps = 67/424 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMS---------- 50
MY K G++D A+ +F MPE VSWN ++ +A+E L+RM
Sbjct: 267 MYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQKSQSSKAIEYLQRMQYHGFEPDEIT 326
Query: 51 ----------SLDNE----------TPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGL 90
S D E +P+L SW+ ++ G++QN +EA+ + MQ +
Sbjct: 327 YVNMLVACIKSGDIEAGRQMFDGMSSPSLSSWNTILSGYSQNENHKEAVKLFREMQFRSV 386
Query: 91 EPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALK 150
P+ TL+ +L + A + L G++ H + F ++ ++ +GL+ +Y +CG + A +
Sbjct: 387 HPDRTTLAIILSSLAGMMLLEGGRQVHAVSQKAVFRTDIYLASGLIGMYSKCGKVEMAKR 446
Query: 151 IFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSL 210
IF + + + V N+++ G N SL
Sbjct: 447 IFDRIAELDIVCWNSMMAGLSLN-----------------------------------SL 471
Query: 211 YDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGG 270
EAF+ F+ + + G+ P+ F++ +VL CA ++SL +G+++H+ G +D FVG
Sbjct: 472 DKEAFTFFKKMREK-GMFPSQFSYATVLSCCAKLSSLSQGRQVHSQIAREGYMNDAFVGS 530
Query: 271 ALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTP 330
AL++MY + D+ AA+ FD + + G+ N A+ L+ +M+ P
Sbjct: 531 ALIDMYSKCGDVDAARWVFDMMLGKNTVTWNEMIHGYAQNGCGDEAVLLYEDMIGSGEKP 590
Query: 331 DIYTVGIILSACSSLATMERGKQV-HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLA 389
D T +L+ACS ++ G ++ ++ G + V T ++D + G L A +
Sbjct: 591 DGITFVAVLTACSHSGLVDTGIKIFNSMQQEHGVEPLVDHYTCIIDSLGRAGRLHEAEVL 650
Query: 390 YKRI 393
++
Sbjct: 651 IDKM 654
>gi|224098357|ref|XP_002311156.1| predicted protein [Populus trichocarpa]
gi|222850976|gb|EEE88523.1| predicted protein [Populus trichocarpa]
Length = 535
Score = 321 bits (822), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 190/576 (32%), Positives = 279/576 (48%), Gaps = 74/576 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +CG +D AK++F+ + RD LV
Sbjct: 32 MYARCGEVDTAKQLFQEIKGRD------------------------------------LV 55
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+WSA+I F Q+GY +EA+ + MQ EGL+ N L S LPACA + L LGK H
Sbjct: 56 AWSAIIAAFVQSGYPQEALSLFRSMQNEGLQANKVILLSSLPACAEVSSLKLGKSMHCCA 115
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ + V LV +Y +CG AL +F++ K+ V+ N +I GY + G A
Sbjct: 116 VKANVDLDISVGTALVSMYAKCGFFALALTLFNRMPCKDVVTWNAMINGYAQIGEPFPAL 175
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
E+F +++ + P S T +L A
Sbjct: 176 EMFHKLQ------------------------------------LSELNPNSGTMVGLLPA 199
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE-NIENLL 299
A +N L +G IH I G +S+ V AL++MY + L A+ F + +
Sbjct: 200 FALLNDLDQGSCIHGKIIKCGFESECHVKTALIDMYAKCGSLSGAEFLFHRTGCRKDEVS 259
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
+ G+ + + +A F +M ++ P+I T+ +L A + L+ + G +HAY I
Sbjct: 260 WNVMIAGYMHSGHAIDAFSAFCQMKLENIQPNIVTIVTVLPAVAHLSALRAGMTLHAYVI 319
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
R G+ S +G L+DMYAKCG L H+ + + D VS N ML YA+HG G I
Sbjct: 320 RMGFQSKTPVGNCLIDMYAKCGWLDHSEKIFHEMKNKDTVSWNVMLAGYAVHGRGSCAIE 379
Query: 420 HFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLL 478
F R+ S R D SF++ LSAC HAG I G + FD M+ + ++P L+HY CM DLL
Sbjct: 380 LFSRMQDSEIRLDSFSFINVLSACRHAGLIGEGRKIFDSMSKQHQLEPDLEHYACMADLL 439
Query: 479 SRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYV 538
RAG E + IK +PM PD+ +WGALLG H N++ + A L +LE N +Y
Sbjct: 440 GRAGLFNEVLDLIKSMPMEPDAGVWGALLGASTMHSNVQLAEFALHHLDKLEHKNLTHYA 499
Query: 539 MLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWI 574
L+N +A +GRW+D+ TR K+ + KSPG SW+
Sbjct: 500 ALSNTYARSGRWADVGNTRSKITKTGLRKSPGYSWV 535
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 135/302 (44%), Gaps = 24/302 (7%)
Query: 244 MNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMK 303
M +L +G EIH A G+ SD V ++ MY R ++ A+ F EI+ + +
Sbjct: 1 MRALGRGTEIHDFARQQGIDSDVAVATPIMTMYARCGEVDTAKQLFQEIKGRDLVAWSAI 60
Query: 304 EDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGY 363
F + Y A+ LF M + L + + L AC+ +++++ GK +H A++
Sbjct: 61 IAAFVQSGYPQEALSLFRSMQNEGLQANKVILLSSLPACAEVSSLKLGKSMHCCAVKANV 120
Query: 364 DSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRR 423
D D+ +GTALV MYAKCG A + R+ D+V+ NAM+ YA G + F +
Sbjct: 121 DLDISVGTALVSMYAKCGFFALALTLFNRMPCKDVVTWNAMINGYAQIGEPFPALEMFHK 180
Query: 424 ILASGFRPDHISFLSALSA-----------CVHAGSIKTGSEFFDLMAYYDVKPSLKHYT 472
+ S P+ + + L A C+H IK G E + VK T
Sbjct: 181 LQLSELNPNSGTMVGLLPAFALLNDLDQGSCIHGKIIKCGFE-----SECHVK------T 229
Query: 473 CMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNL--EFGQIAADRLIELE 530
++D+ ++ G L A + D V W ++ G + G+ F +L ++
Sbjct: 230 ALIDMYAKCGSLSGAEFLFHRTGCRKDEVSWNVMIAGYMHSGHAIDAFSAFCQMKLENIQ 289
Query: 531 PN 532
PN
Sbjct: 290 PN 291
>gi|224145066|ref|XP_002325515.1| predicted protein [Populus trichocarpa]
gi|222862390|gb|EEE99896.1| predicted protein [Populus trichocarpa]
Length = 683
Score = 321 bits (822), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 177/555 (31%), Positives = 296/555 (53%), Gaps = 6/555 (1%)
Query: 51 SLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKL 110
+++++ N + W+ +I + NG EA+ M +G+ P+ T SVL AC L
Sbjct: 99 TVNSDIVNPLPWNLLISSYVNNGLHGEALSAYREMVHKGVRPDNFTYPSVLKACGEKLDL 158
Query: 111 SLGKEFHGYITRN-GFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVG 169
G+E H I G N +V N LV +Y + G++ +A ++F++ ++ VS N II
Sbjct: 159 DFGREVHESINAAYGHRWNLYVHNSLVSMYGKFGELDAARRLFNQMPERDAVSWNGIISN 218
Query: 170 YCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRD-GIE 228
Y G EA ELF++M G + II+WN++ G V + A + + D ++
Sbjct: 219 YASRGLWKEAFELFEEMRLAGAEVNIITWNTIAGGCVQTRNFKGALELLSQMRRCDIDLD 278
Query: 229 PTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMA 288
P + G L AC+ + +++ G IHA AI V AL+ MY R +DL A +
Sbjct: 279 PVAMIIG--LGACSHIGAIKLGTVIHASAIRSCFDGFDNVRNALITMYSRCKDLRHADIL 336
Query: 289 FDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATM 348
F I+ G+ + A LF EML + P+ T+ IL C+ +A +
Sbjct: 337 FKSIKTKSLTTWNSMLSGYTHMDRSEEASFLFREMLFSGIEPNYVTIASILPHCARVANL 396
Query: 349 ERGKQVHAYAIRC-GYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTA 407
++GK+ H Y +R G++ + + +LV+MYA+ G + A+ + + D V+ +++
Sbjct: 397 QQGKEFHCYIMRREGFEDYLLLWNSLVEMYARSGKVLSAKRVFDSLRRRDKVTYTSLIAG 456
Query: 408 YAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKP 466
Y + G GK + F ++ +PD ++ ++ LSAC H+G + G+ F+ M+ Y + P
Sbjct: 457 YGIQGEGKTALKLFDEMIKHRIKPDQVTMVAVLSACSHSGLVTEGNVLFEKMSTLYGIVP 516
Query: 467 SLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRL 526
+++H++CMVDL RAG L +A + I +P P + MW L+G C HGN E G+ AA++L
Sbjct: 517 AVEHFSCMVDLFGRAGLLNKAKKVITSMPYRPTTAMWATLVGACRIHGNTEIGEWAAEKL 576
Query: 527 IELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRAS 586
+E++P N G YV++AN+ A AGRWS LA R M+D + K+PGC+W++ F
Sbjct: 577 LEMKPENPGYYVLIANMHAAAGRWSKLAEVRTYMRDLGVRKAPGCTWVDVGSGFSPFVVG 636
Query: 587 DRSHDRSEEIYTIID 601
D S S ++Y +++
Sbjct: 637 DTSKHNSNDLYELLE 651
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 123/467 (26%), Positives = 207/467 (44%), Gaps = 76/467 (16%)
Query: 82 LFRMQAEGLEPNA--RTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVY 139
L ++ A +A ++SS+L +C L+ L GK+ H + GF ++ +V LV Y
Sbjct: 27 LIKLHASSANRDAILHSISSLLYSCTNLKSLPQGKQLHAHTISLGFENHLVLVPKLVTFY 86
Query: 140 RRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWN 199
+ A I I N + N +I Y NG EA + +M H GV+
Sbjct: 87 SSFSLLADAHTITVNSDIVNPLPWNLLISSYVNNGLHGEALSAYREMVHKGVR------- 139
Query: 200 SMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIH-ALAI 258
P +FT+ SVL AC + L G+E+H ++
Sbjct: 140 -----------------------------PDNFTYPSVLKACGEKLDLDFGREVHESINA 170
Query: 259 ALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIEN---------IEN------------ 297
A G + + +V +LV MY ++ +L AA+ F+++ I N
Sbjct: 171 AYGHRWNLYVHNSLVSMYGKFGELDAARRLFNQMPERDAVSWNGIISNYASRGLWKEAFE 230
Query: 298 LLGKMKEDGFEPNVYTWN--------------AMQLFSEMLSLDLTPDIYTVGIILSACS 343
L +M+ G E N+ TWN A++L S+M D+ D + I L ACS
Sbjct: 231 LFEEMRLAGAEVNIITWNTIAGGCVQTRNFKGALELLSQMRRCDIDLDPVAMIIGLGACS 290
Query: 344 SLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNA 403
+ ++ G +HA AIR +D ++ AL+ MY++C L+HA + +K I T L + N+
Sbjct: 291 HIGAIKLGTVIHASAIRSCFDGFDNVRNALITMYSRCKDLRHADILFKSIKTKSLTTWNS 350
Query: 404 MLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFF-DLMAYY 462
ML+ Y +E FR +L SG P++++ S L C +++ G EF +M
Sbjct: 351 MLSGYTHMDRSEEASFLFREMLFSGIEPNYVTIASILPHCARVANLQQGKEFHCYIMRRE 410
Query: 463 DVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
+ L + +V++ +R+G++ A + D V + +L+ G
Sbjct: 411 GFEDYLLLWNSLVEMYARSGKVLSAKRVFDSL-RRRDKVTYTSLIAG 456
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 112/420 (26%), Positives = 186/420 (44%), Gaps = 40/420 (9%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGK G LD A+++F MPERD VSWN +++ A+ GL EA E E M L N++
Sbjct: 187 MYGKFGELDAARRLFNQMPERDAVSWNGIISNYASRGLWKEAFELFEEM-RLAGAEVNII 245
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+ + GG Q + A+ +L +M+ ++ + + L AC+ + + LG H
Sbjct: 246 TWNTIAGGCVQTRNFKGALELLSQMRRCDIDLDPVAMIIGLGACSHIGAIKLGTVIHASA 305
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R+ F V N L+ +Y RC D+ A +F K+ + N+++ GY EA
Sbjct: 306 IRSCFDGFDNVRNALITMYSRCKDLRHADILFKSIKTKSLTTWNSMLSGYTHMDRSEEAS 365
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LF +M + GIEP T S+L
Sbjct: 366 FLFREM------------------------------------LFSGIEPNYVTIASILPH 389
Query: 241 CADMNSLRKGKEIHALAIAL-GLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
CA + +L++GKE H + G + + +LVEMY R +++A+ FD + + +
Sbjct: 390 CARVANLQQGKEFHCYIMRREGFEDYLLLWNSLVEMYARSGKVLSAKRVFDSLRRRDKVT 449
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV-HAYA 358
G+ A++LF EM+ + PD T+ +LSACS + G + +
Sbjct: 450 YTSLIAGYGIQGEGKTALKLFDEMIKHRIKPDQVTMVAVLSACSHSGLVTEGNVLFEKMS 509
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNAMLTAYAMHGHGKEG 417
G V + +VD++ + G L A+ + P ++ A +HG+ + G
Sbjct: 510 TLYGIVPAVEHFSCMVDLFGRAGLLNKAKKVITSMPYRPTTAMWATLVGACRIHGNTEIG 569
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 113/253 (44%), Gaps = 1/253 (0%)
Query: 213 EAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGAL 272
E FS+ + + + S+L +C ++ SL +GK++HA I+LG ++ + L
Sbjct: 23 ETFSLIKLHASSANRDAILHSISSLLYSCTNLKSLPQGKQLHAHTISLGFENHLVLVPKL 82
Query: 273 VEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDI 332
V Y + L A + + L + + N A+ + EM+ + PD
Sbjct: 83 VTFYSSFSLLADAHTITVNSDIVNPLPWNLLISSYVNNGLHGEALSAYREMVHKGVRPDN 142
Query: 333 YTVGIILSACSSLATMERGKQVH-AYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYK 391
+T +L AC ++ G++VH + G+ ++++ +LV MY K G L AR +
Sbjct: 143 FTYPSVLKACGEKLDLDFGREVHESINAAYGHRWNLYVHNSLVSMYGKFGELDAARRLFN 202
Query: 392 RISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKT 451
++ D VS N +++ YA G KE F + +G + I++ + CV + K
Sbjct: 203 QMPERDAVSWNGIISNYASRGLWKEAFELFEEMRLAGAEVNIITWNTIAGGCVQTRNFKG 262
Query: 452 GSEFFDLMAYYDV 464
E M D+
Sbjct: 263 ALELLSQMRRCDI 275
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 110/225 (48%), Gaps = 5/225 (2%)
Query: 292 IENIENLLGKMKEDGFEPNVY-TWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMER 350
I+N+ N L + G + T++ ++L + + D ++++ +L +C++L ++ +
Sbjct: 2 IDNLFNSLKDLARKGHLLKAFETFSLIKLHASSANRDAI--LHSISSLLYSCTNLKSLPQ 59
Query: 351 GKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAM 410
GKQ+HA+ I G+++ + + LV Y+ L A + + N ++++Y
Sbjct: 60 GKQLHAHTISLGFENHLVLVPKLVTFYSSFSLLADAHTITVNSDIVNPLPWNLLISSYVN 119
Query: 411 HGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFD-LMAYYDVKPSLK 469
+G E ++ +R ++ G RPD+ ++ S L AC + G E + + A Y + +L
Sbjct: 120 NGLHGEALSAYREMVHKGVRPDNFTYPSVLKACGEKLDLDFGREVHESINAAYGHRWNLY 179
Query: 470 HYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
+ +V + + GEL A ++P D+V W ++ S G
Sbjct: 180 VHNSLVSMYGKFGELDAARRLFNQMP-ERDAVSWNGIISNYASRG 223
>gi|224090525|ref|XP_002309013.1| predicted protein [Populus trichocarpa]
gi|222854989|gb|EEE92536.1| predicted protein [Populus trichocarpa]
Length = 583
Score = 321 bits (822), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 196/616 (31%), Positives = 303/616 (49%), Gaps = 105/616 (17%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KC L +A++VF M ER NLV
Sbjct: 47 LYAKCRKLREARQVFDEMSER------------------------------------NLV 70
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SWSA+I G+ Q G A+G+ ++ + PN +SV+ ACA L+ L GK+ HG
Sbjct: 71 SWSAMISGYEQIGEPISALGLFSKLN---IVPNEYVYASVISACASLKGLVQGKQIHGQA 127
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G S FV N L+ +Y +CG C+ ++ Y EA
Sbjct: 128 LKFGLDSVSFVSNALITMYMKCG------------------KCSDALLAY------NEAL 163
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
EL +++N++I+G+V+N D+ F + R ++ +DG P FTF +L
Sbjct: 164 EL-----------NPVAYNALITGFVENQQPDKGFEVLR-MMYQDGFFPDRFTFVGLLGT 211
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C + L++G+ +H I L L S F+G ++ MY + L A+ AF IE
Sbjct: 212 CNSRDDLKRGELLHCQTIKLKLNSTAFIGNLIITMYSKLNLLEEAEKAFRSIE------- 264
Query: 301 KMKEDGFEPNVYTWN--------------AMQLFSEMLS-LDLTPDIYTVGIILSACSSL 345
E ++ +WN A++ F EML+ + PD +T L+ACS L
Sbjct: 265 -------EKDLISWNTFISSCSHCNDHEKALEAFKEMLNECRVRPDEFTFASALAACSGL 317
Query: 346 ATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAML 405
A+M GKQ+H + IR DV G AL++MYAKCG + A + ++ +LVS N M+
Sbjct: 318 ASMCNGKQIHGHLIRTRLYQDVGAGNALINMYAKCGCIAKAYYIFSKMEHQNLVSWNTMI 377
Query: 406 TAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDV 464
+ HG G + F ++ G +PD ++F+ L+A HAG + G +F+ M Y +
Sbjct: 378 AGFGNHGFGGKAFELFAKMKTMGVKPDSVTFVGLLTASNHAGLVDEGLVYFNSMEETYGI 437
Query: 465 KPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAAD 524
P ++H++C++DLL RAG L EA E++KK P D+V+ G+LL C HG+++ G+ A
Sbjct: 438 SPEIEHFSCLIDLLGRAGRLNEAKEYMKKFPFGHDTVVLGSLLSACRLHGDVDTGKCFAR 497
Query: 525 RLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFR 584
+L++L+P T YV+L+NL+A W +A + +K + K PG S IE KF
Sbjct: 498 QLLKLQPATTSPYVLLSNLYASDEMWDGVAEAWKLLKGSGLKKEPGHSLIEVNGTFEKFT 557
Query: 585 ASDRSHDRSEEIYTII 600
D SH R EEI ++
Sbjct: 558 VVDFSHSRIEEIMDML 573
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 102/419 (24%), Positives = 187/419 (44%), Gaps = 41/419 (9%)
Query: 97 LSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFS 156
+ S++ C++ + L G H + S+ V N ++++Y +C +
Sbjct: 6 VGSLIHQCSKTKALRQGLPLHAIAIKTATRSDVIVSNHILNLYAKCRKL----------- 54
Query: 157 IKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFS 216
EAR++FD+M +R ++SW++MISGY A
Sbjct: 55 --------------------REARQVFDEMS----ERNLVSWSAMISGYEQIGEPISALG 90
Query: 217 MFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMY 276
+F L I P + + SV+ ACA + L +GK+IH A+ GL S +FV AL+ MY
Sbjct: 91 LFSKL----NIVPNEYVYASVISACASLKGLVQGKQIHGQALKFGLDSVSFVSNALITMY 146
Query: 277 CRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVG 336
+ A +A++E + + GF N ++ M PD +T
Sbjct: 147 MKCGKCSDALLAYNEALELNPVAYNALITGFVENQQPDKGFEVLRMMYQDGFFPDRFTFV 206
Query: 337 IILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTP 396
+L C+S ++RG+ +H I+ +S IG ++ MY+K L+ A A++ I
Sbjct: 207 GLLGTCNSRDDLKRGELLHCQTIKLKLNSTAFIGNLIITMYSKLNLLEEAEKAFRSIEEK 266
Query: 397 DLVSQNAMLTAYAMHGHGKEGIAHFRRILAS-GFRPDHISFLSALSACVHAGSIKTGSEF 455
DL+S N +++ + ++ + F+ +L RPD +F SAL+AC S+ G +
Sbjct: 267 DLISWNTFISSCSHCNDHEKALEAFKEMLNECRVRPDEFTFASALAACSGLASMCNGKQI 326
Query: 456 FDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
+ + + ++++ ++ G + +AY K+ + V W ++ G +HG
Sbjct: 327 HGHLIRTRLYQDVGAGNALINMYAKCGCIAKAYYIFSKME-HQNLVSWNTMIAGFGNHG 384
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 137/285 (48%), Gaps = 13/285 (4%)
Query: 235 GSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIEN 294
GS++ C+ +LR+G +HA+AI +SD V ++ +Y + + L A+ FDE+
Sbjct: 7 GSLIHQCSKTKALRQGLPLHAIAIKTATRSDVIVSNHILNLYAKCRKLREARQVFDEMSE 66
Query: 295 IENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV 354
+ G+E +A+ LFS+ L++ P+ Y ++SAC+SL + +GKQ+
Sbjct: 67 RNLVSWSAMISGYEQIGEPISALGLFSK---LNIVPNEYVYASVISACASLKGLVQGKQI 123
Query: 355 HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHG 414
H A++ G DS + AL+ MY KCG A LAY + V+ NA++T + +
Sbjct: 124 HGQALKFGLDSVSFVSNALITMYMKCGKCSDALLAYNEALELNPVAYNALITGFVENQQP 183
Query: 415 KEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCM 474
+G R + GF PD +F+ L C +K G +L+ +K L +
Sbjct: 184 DKGFEVLRMMYQDGFFPDRFTFVGLLGTCNSRDDLKRG----ELLHCQTIKLKLNSTAFI 239
Query: 475 VDLL----SRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
+L+ S+ L EA + + I D + W + C SH N
Sbjct: 240 GNLIITMYSKLNLLEEAEKAFRSIE-EKDLISWNTFISSC-SHCN 282
>gi|413952893|gb|AFW85542.1| hypothetical protein ZEAMMB73_270374 [Zea mays]
Length = 716
Score = 321 bits (822), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 187/575 (32%), Positives = 290/575 (50%), Gaps = 73/575 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K L+ A+KVF+ +P+R N+V
Sbjct: 209 MYAKAEDLECARKVFERIPDR------------------------------------NVV 232
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+++I G QNG+ + + + +M+ + + P+ T+++V+ AC+ L L G+ HG +
Sbjct: 233 SWTSMISGCVQNGFASDGLLLFNKMRQDNVPPSEYTIATVITACSALFGLHQGRWMHGSV 292
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G MSN F+ L+D+Y +CG++ A +F + S + V T+IVGY +NGN +A
Sbjct: 293 IKQGLMSNSFISAALLDMYVKCGELDHARCVFDELSYIDLVLWTTMIVGYTQNGNPLDAL 352
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LF D+ F+ I P S T +VL A
Sbjct: 353 RLF---------------------------LDKRFA---------NIAPNSVTTATVLSA 376
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
A + L GK IH LA+ LGL VG ALV+MY + Q + A F I N + +
Sbjct: 377 SAQLRDLSLGKSIHGLAVKLGLVEYNVVGNALVDMYAKCQAVSEADRIFGRISNKDVVAW 436
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G+ N +A+ LF +M +PD +V LSA L + GK +H YA++
Sbjct: 437 NSMISGYAENNMGDDALMLFKQMSLQGSSPDAISVVNALSASVCLGDLLIGKSIHGYAVK 496
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
+ S++++ TAL+++Y KCG L AR + ++ + V+ AM+ Y M G I
Sbjct: 497 HAFVSNIYVDTALLNLYNKCGDLLSARRVFDEMNDRNSVTWCAMIGGYGMQGDSAGSIHL 556
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLLS 479
F +L G P+ I+F S LS C H+G + G +FD MA ++++ PS+KHY CMVD+L+
Sbjct: 557 FGEMLKDGVYPNDIAFTSILSTCSHSGMVTAGKRYFDSMAQHFNITPSMKHYACMVDVLA 616
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
RAG L +A EFI +PM D+ +WGA L GC H L+F + A R++ L P YV+
Sbjct: 617 RAGNLEDALEFIDNMPMQADTSVWGAFLHGCELHSRLQFAEEAIKRMMVLHPERPDLYVL 676
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWI 574
++NL+ G W R+ M+++ + K PGCS +
Sbjct: 677 ISNLYTSNGMWDKSLAIRRWMQEKGLVKLPGCSSV 711
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 128/465 (27%), Positives = 222/465 (47%), Gaps = 41/465 (8%)
Query: 48 RMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNAR---TLSSVLPAC 104
RM P+ S+ A++ Q +A+ + M+ P A+ LS L AC
Sbjct: 117 RMVFDGTPRPDAYSYGAMLWCLVQTERHADAVALHHDMRRRRPCPEAQDDFVLSLALKAC 176
Query: 105 ARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCN 164
R + S G+ H + G ++ FV+N LVD+Y + D+ A K+F + +N
Sbjct: 177 IRSAEYSYGRSLHCDAIKVGG-ADGFVMNSLVDMYAKAEDLECARKVFERIPDRN----- 230
Query: 165 TIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMR 224
++SW SMISG V N + +F + +
Sbjct: 231 ------------------------------VVSWTSMISGCVQNGFASDGLLLFNKM-RQ 259
Query: 225 DGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVA 284
D + P+ +T +V+ AC+ + L +G+ +H I GL S++F+ AL++MY + +L
Sbjct: 260 DNVPPSEYTIATVITACSALFGLHQGRWMHGSVIKQGLMSNSFISAALLDMYVKCGELDH 319
Query: 285 AQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSS 344
A+ FDE+ I+ +L G+ N +A++LF + ++ P+ T +LSA +
Sbjct: 320 ARCVFDELSYIDLVLWTTMIVGYTQNGNPLDALRLFLDKRFANIAPNSVTTATVLSASAQ 379
Query: 345 LATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAM 404
L + GK +H A++ G +G ALVDMYAKC ++ A + RIS D+V+ N+M
Sbjct: 380 LRDLSLGKSIHGLAVKLGLVEYNVVGNALVDMYAKCQAVSEADRIFGRISNKDVVAWNSM 439
Query: 405 LTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDV 464
++ YA + G + + F+++ G PD IS ++ALSA V G + G +
Sbjct: 440 ISGYAENNMGDDALMLFKQMSLQGSSPDAISVVNALSASVCLGDLLIGKSIHGYAVKHAF 499
Query: 465 KPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
++ T +++L ++ G+L A ++ +SV W A++GG
Sbjct: 500 VSNIYVDTALLNLYNKCGDLLSARRVFDEMN-DRNSVTWCAMIGG 543
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 157/347 (45%), Gaps = 18/347 (5%)
Query: 170 YCENGNVAEARELFDQMEHLGVQR-GIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIE 228
Y G++A AR +FD G R S+ +M+ V + +A ++ D+ R
Sbjct: 107 YAALGDLASARMVFD-----GTPRPDAYSYGAMLWCLVQTERHADAVALHHDMRRRRPCP 161
Query: 229 PTS--FTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQ 286
F L AC G+ +H AI +G +D FV +LV+MY + +DL A+
Sbjct: 162 EAQDDFVLSLALKACIRSAEYSYGRSLHCDAIKVG-GADGFVMNSLVDMYAKAEDLECAR 220
Query: 287 MAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLA 346
F+ I + + G N + + + LF++M ++ P YT+ +++ACS+L
Sbjct: 221 KVFERIPDRNVVSWTSMISGCVQNGFASDGLLLFNKMRQDNVPPSEYTIATVITACSALF 280
Query: 347 TMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLT 406
+ +G+ +H I+ G S+ I AL+DMY KCG L HAR + +S DLV M+
Sbjct: 281 GLHQGRWMHGSVIKQGLMSNSFISAALLDMYVKCGELDHARCVFDELSYIDLVLWTTMIV 340
Query: 407 AYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKP 466
Y +G+ + + F + P+ ++ + LSA + G L VK
Sbjct: 341 GYTQNGNPLDALRLFLDKRFANIAPNSVTTATVLSASAQLRDLSLGKSIHGLA----VKL 396
Query: 467 SLKHY----TCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
L Y +VD+ ++ + EA +I D V W +++ G
Sbjct: 397 GLVEYNVVGNALVDMYAKCQAVSEADRIFGRIS-NKDVVAWNSMISG 442
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 75/200 (37%), Gaps = 33/200 (16%)
Query: 371 TALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA---HFRRILAS 427
T L+ YA G L AR+ + PD S AML + +A RR
Sbjct: 101 TKLLSCYAALGDLASARMVFDGTPRPDAYSYGAMLWCLVQTERHADAVALHHDMRRRRPC 160
Query: 428 GFRPDHISFLSALSACV-----------HAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVD 476
D AL AC+ H +IK G +M +VD
Sbjct: 161 PEAQDDFVLSLALKACIRSAEYSYGRSLHCDAIKVGGADGFVM------------NSLVD 208
Query: 477 LLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCV-----SHGNLEFGQIAADRLIELEP 531
+ ++A +L A + ++IP + V W +++ GCV S G L F ++ D + E
Sbjct: 209 MYAKAEDLECARKVFERIP-DRNVVSWTSMISGCVQNGFASDGLLLFNKMRQDNVPPSEY 267
Query: 532 NNTGNYVMLANLFA-YAGRW 550
+ LF + GRW
Sbjct: 268 TIATVITACSALFGLHQGRW 287
>gi|224119830|ref|XP_002318172.1| predicted protein [Populus trichocarpa]
gi|222858845|gb|EEE96392.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 321 bits (822), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 182/550 (33%), Positives = 301/550 (54%), Gaps = 42/550 (7%)
Query: 57 PNLVSWSAVIGGF--TQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGK 114
PN+ +++ ++ G T YD + + +++++ GL+ N T + AC ++ L GK
Sbjct: 90 PNIYAFNVMLRGLATTWKKYDF-CVELYYKLKSLGLKANNFTYPFLFIACGNVRGLVHGK 148
Query: 115 EFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
H + + G + +V + L+ +Y RCG+M G+
Sbjct: 149 IGHCLVFKAGLDGDEYVNHSLITMYARCGEM-----------------------GF---- 181
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTF 234
AR++FD+M R ++SWNSMISGY EA +F ++ +G EP T
Sbjct: 182 ----ARKVFDEMG----DRDLVSWNSMISGYSKMGFTKEAIGLFMEM-REEGFEPDEMTL 232
Query: 235 GSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIEN 294
SVL AC D+ L G+ + + ++ ++++G AL++MY + DL++A+ FD + N
Sbjct: 233 VSVLGACGDLGDLGLGRWVEGFVLEKKMEVNSYMGSALIDMYGKCGDLISARRVFDSMPN 292
Query: 295 IENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV 354
+ + G+ N + A+ LF+ M PD T+ +LSACS++ ++ GK V
Sbjct: 293 KDVVTWNAIITGYAQNGASNEAIVLFNGMREAGPHPDRVTMIEVLSACSTIGALDLGKWV 352
Query: 355 HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHG 414
+A G DV++ +AL+DMYAKCGSL A ++ + + VS NAM++A A HG
Sbjct: 353 ETHASEKGLQHDVYVASALIDMYAKCGSLDDAVRVFESMPHKNEVSWNAMISALAFHGQA 412
Query: 415 KEGIAHFRRILASG--FRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHY 471
+E ++ FRR+ +P+ I+F+ LSACVHAG + G + F+ M + + P ++HY
Sbjct: 413 QEALSLFRRMSKDNGTVQPNDITFIGVLSACVHAGLVDEGRQLFESMNLSFGLVPKVEHY 472
Query: 472 TCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEP 531
+CMVDL +RAG L EA++ IKK+P PD ++ G+LLG C N + G+ +E+E
Sbjct: 473 SCMVDLCARAGLLYEAWDLIKKMPGKPDEIVLGSLLGACQRRRNADVGERVIQLFLEMEL 532
Query: 532 NNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHD 591
+N+GNYV+ + ++A RW D A+ R M+ + K+PGCSWI+ +H+F A D H+
Sbjct: 533 SNSGNYVISSKIYANMRRWDDSAKMRVLMRQCGVSKTPGCSWIDIGAHVHEFHAGDSLHN 592
Query: 592 RSEEIYTIID 601
S IY +++
Sbjct: 593 HSMNIYQLLN 602
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/384 (25%), Positives = 182/384 (47%), Gaps = 7/384 (1%)
Query: 135 LVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRG 194
L+ + ++C +I ++ I + N ++ + ++A A +F+Q+ +
Sbjct: 36 LLSLIKQCKSKNLLKQIHAQMLINSIPKPNFLLSKIIDLKDLAYASLVFNQL----TKPN 91
Query: 195 IISWNSMISGYVDN-SLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEI 253
I ++N M+ G YD ++ L G++ +FT+ + IAC ++ L GK
Sbjct: 92 IYAFNVMLRGLATTWKKYDFCVELYYKL-KSLGLKANNFTYPFLFIACGNVRGLVHGKIG 150
Query: 254 HALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYT 313
H L GL D +V +L+ MY R ++ A+ FDE+ + + + G+ +T
Sbjct: 151 HCLVFKAGLDGDEYVNHSLITMYARCGEMGFARKVFDEMGDRDLVSWNSMISGYSKMGFT 210
Query: 314 WNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTAL 373
A+ LF EM PD T+ +L AC L + G+ V + + + + ++G+AL
Sbjct: 211 KEAIGLFMEMREEGFEPDEMTLVSVLGACGDLGDLGLGRWVEGFVLEKKMEVNSYMGSAL 270
Query: 374 VDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDH 433
+DMY KCG L AR + + D+V+ NA++T YA +G E I F + +G PD
Sbjct: 271 IDMYGKCGDLISARRVFDSMPNKDVVTWNAIITGYAQNGASNEAIVLFNGMREAGPHPDR 330
Query: 434 ISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKK 493
++ + LSAC G++ G + ++ + + ++D+ ++ G L +A +
Sbjct: 331 VTMIEVLSACSTIGALDLGKWVETHASEKGLQHDVYVASALIDMYAKCGSLDDAVRVFES 390
Query: 494 IPMAPDSVMWGALLGGCVSHGNLE 517
+P + V W A++ HG +
Sbjct: 391 MP-HKNEVSWNAMISALAFHGQAQ 413
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 113/411 (27%), Positives = 175/411 (42%), Gaps = 76/411 (18%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +CG + A+KVF M +RD LV
Sbjct: 172 MYARCGEMGFARKVFDEMGDRD------------------------------------LV 195
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+++I G+++ G+ +EAIG+ M+ EG EP+ TL SVL AC L L LG+ G++
Sbjct: 196 SWNSMISGYSKMGFTKEAIGLFMEMREEGFEPDEMTLVSVLGACGDLGDLGLGRWVEGFV 255
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
N ++ + L+D+Y +CGD++SA ++F K+ V+ N II GY +NG EA
Sbjct: 256 LEKKMEVNSYMGSALIDMYGKCGDLISARRVFDSMPNKDVVTWNAIITGYAQNGASNEAI 315
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LF+ M G P T VL A
Sbjct: 316 VLFNGMREAGPH------------------------------------PDRVTMIEVLSA 339
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C+ + +L GK + A GLQ D +V AL++MY + L A F+ + + +
Sbjct: 340 CSTIGALDLGKWVETHASEKGLQHDVYVASALIDMYAKCGSLDDAVRVFESMPHKNEVSW 399
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLT--PDIYTVGIILSACSSLATMERGKQV-HAY 357
+ A+ LF M + T P+ T +LSAC ++ G+Q+ +
Sbjct: 400 NAMISALAFHGQAQEALSLFRRMSKDNGTVQPNDITFIGVLSACVHAGLVDEGRQLFESM 459
Query: 358 AIRCGYDSDVHIGTALVDMYAKCGSLKHA-RLAYKRISTPDLVSQNAMLTA 407
+ G V + +VD+ A+ G L A L K PD + ++L A
Sbjct: 460 NLSFGLVPKVEHYSCMVDLCARAGLLYEAWDLIKKMPGKPDEIVLGSLLGA 510
>gi|449461407|ref|XP_004148433.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 749
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 177/614 (28%), Positives = 307/614 (50%), Gaps = 86/614 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KCG ++ A KVF +P R N+
Sbjct: 102 VYSKCGVMESAHKVFDNLPRR------------------------------------NVN 125
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+ ++ G+ QN + A+ + +M G P+ TL VL AC+ LQ + GK+ H Y+
Sbjct: 126 AWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHAYL 185
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ + + N L Y + + A+K F
Sbjct: 186 IKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIK------------------------ 221
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
++ +ISW S+IS DN + S F D+L DG++P +T SVL A
Sbjct: 222 -----------EKDVISWTSVISSCCDNGQAARSLSFFMDML-SDGMKPNEYTLTSVLSA 269
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C M +L G +IH+L+I LG S + +++ +Y + L+ AQ F+ +E + NL+
Sbjct: 270 CCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETL-NLVT 328
Query: 301 ------------KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATM 348
+ ED + A+ +F ++ + PD++T +LS CS+L +
Sbjct: 329 WNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVAL 388
Query: 349 ERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAY 408
E+G+Q+H I+ G +DV +GTALV MY KCGS+ A A+ + + ++S +M+T +
Sbjct: 389 EQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGF 448
Query: 409 AMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPS 467
A HG ++ + F + G +P+ ++F+ LSAC HAG +F+LM Y++KP
Sbjct: 449 ARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLADEALYYFELMQKQYNIKPV 508
Query: 468 LKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLI 527
+ H+ C++D+ R G + EA++ + K+ P+ +W L+ GC SHG + G AA++L+
Sbjct: 509 MDHFACLIDMYLRLGRVEEAFDVVHKMNFEPNETIWSMLIAGCRSHGKSDLGFYAAEQLL 568
Query: 528 ELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASD 587
+L+P + YV L N+ AGRW D+++ R+ MK+ ++ K SWI +++++ F+ +D
Sbjct: 569 KLKPKDVETYVSLLNMHISAGRWKDVSKVRKLMKEEKVGKLKDWSWISIKEKVYSFKPND 628
Query: 588 RSHDRSEEIYTIID 601
+SH +S E+Y +++
Sbjct: 629 KSHCQSLEMYKLLE 642
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 141/300 (47%), Gaps = 1/300 (0%)
Query: 226 GIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAA 285
G S + +L C D N + + IH + G D FV LV +Y + + +A
Sbjct: 53 GTRIESSYYFPLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESA 112
Query: 286 QMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSL 345
FD + G+ N + A+QLF +ML P YT+GI+L+ACSSL
Sbjct: 113 HKVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSL 172
Query: 346 ATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAML 405
++E GKQVHAY I+ D D IG +L Y+K L+ A A+K I D++S +++
Sbjct: 173 QSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVI 232
Query: 406 TAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVK 465
++ +G ++ F +L+ G +P+ + S LSAC ++ G++ L
Sbjct: 233 SSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYG 292
Query: 466 PSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADR 525
S+ ++ L + G L EA + + + + V W A++ G +L +AA +
Sbjct: 293 SSILIKNSIMYLYLKCGWLIEAQKLFEGME-TLNLVTWNAMIAGHAKMMDLAEDDVAAHK 351
>gi|449443642|ref|XP_004139586.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
gi|449492832|ref|XP_004159115.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 663
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 184/637 (28%), Positives = 318/637 (49%), Gaps = 81/637 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC ++ A++VF + + SWN ++ + + A++ +M D+ V
Sbjct: 37 MYIKCDAIYAAEQVFLRIEKPSLFSWNCMIYGYSKLHEMGRAIDTFRQMPERDS-----V 91
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ +I F+ +G +++G M +G +PN+ T +SVL ACA + GK H I
Sbjct: 92 SWNTIISAFSHHGLHIQSLGTFVEMWIQGCQPNSMTYASVLSACANIYDFQWGKHLHARI 151
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R + V NGLVD+Y +CG + ++ ++F+ N V+ ++I G
Sbjct: 152 VRVEPFLDVLVGNGLVDMYAKCGLIDASKRVFNTLREHNVVTWTSLISG----------- 200
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+ H G Q +YD + M +D ++ D +F ++L
Sbjct: 201 -----IAHFGSQE---------------EVYDIFYQMRKDCVIMD-----NFILATILGV 235
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFD---------- 290
C ++ G+++H + G+ S VG A + MY + D A +AF+
Sbjct: 236 CEGETNISIGEQLHGFTVKTGMNSSVPVGNATLSMYAKCGDFEKASLAFETMAAHDVISW 295
Query: 291 -----------EIENIENLLGKMKEDGFEPNVYTWNAM--------------QLFSEMLS 325
+E + +M E NV +WNAM +L+ ML
Sbjct: 296 TTMITSFSHSGNVERARDYFNRMPE----RNVISWNAMLGAYCQNSFWEEGLKLYILMLR 351
Query: 326 LDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKH 385
++ PD T ++ ACS LA + G Q+ + A++ G SDV + + + +Y++CG ++
Sbjct: 352 QEVRPDWITFVTMIGACSELAISKLGTQILSQAVKVGLGSDVSVVNSAITLYSRCGRIEE 411
Query: 386 ARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVH 445
A+ + I +L+S N+++ YA +G G + I F+ +L +G +PDHI++++ LS C H
Sbjct: 412 AQNLFDSIQEKNLISWNSIMGGYAQNGEGMKVIEIFQNMLMAGCKPDHITYIAILSGCSH 471
Query: 446 AGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWG 504
+G +K F+ M + + +L+H+ CMVDL RAG L A + I ++P P++ +WG
Sbjct: 472 SGLVKEAKYHFNSMTKDFGISVTLEHFVCMVDLFGRAGLLKLALDMIDQMPFKPNASIWG 531
Query: 505 ALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRR 564
ALL C H + E ++A L+EL N +Y++LAN ++ GR ++ RQ MK++R
Sbjct: 532 ALLSACRIHHDTEMAELAMKNLLELNTENFESYILLANTYSSFGRLECVSEVRQVMKEKR 591
Query: 565 MHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
+ K PGCSWIE + +H F A+D SH + ++IY ++
Sbjct: 592 VQKDPGCSWIEVCNRVHVFTANDTSHPQVKDIYKALE 628
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 111/448 (24%), Positives = 207/448 (46%), Gaps = 47/448 (10%)
Query: 103 ACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVS 162
AC+ + + + + HG + GF +N + N ++D+Y +C + +A ++F + + S
Sbjct: 2 ACSSVGYIRIAHQLHGLSEKYGFGNNKVIQNSIIDMYIKCDAIYAAEQVFLRIEKPSLFS 61
Query: 163 CNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLL 222
N +I GY + + A + F QM +R +SWN++IS + + L+ ++ F ++
Sbjct: 62 WNCMIYGYSKLHEMGRAIDTFRQMP----ERDSVSWNTIISAFSHHGLHIQSLGTFVEMW 117
Query: 223 MRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDL 282
++ G +P S T+ SVL ACA++ + GK +HA + + D VG LV+MY + +
Sbjct: 118 IQ-GCQPNSMTYASVLSACANIYDFQWGKHLHARIVRVEPFLDVLVGNGLVDMYAKCGLI 176
Query: 283 VAAQMAFDEIE-----NIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGI 337
A++ F+ + +L+ + G + VY +F +M + D + +
Sbjct: 177 DASKRVFNTLREHNVVTWTSLISGIAHFGSQEEVY-----DIFYQMRKDCVIMDNFILAT 231
Query: 338 ILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPD 397
IL C + G+Q+H + ++ G +S V +G A + MYAKCG + A LA++ ++ D
Sbjct: 232 ILGVCEGETNISIGEQLHGFTVKTGMNSSVPVGNATLSMYAKCGDFEKASLAFETMAAHD 291
Query: 398 -------------------------------LVSQNAMLTAYAMHGHGKEGIAHFRRILA 426
++S NAML AY + +EG+ + +L
Sbjct: 292 VISWTTMITSFSHSGNVERARDYFNRMPERNVISWNAMLGAYCQNSFWEEGLKLYILMLR 351
Query: 427 SGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGE 486
RPD I+F++ + AC K G++ + + + L SR G + E
Sbjct: 352 QEVRPDWITFVTMIGACSELAISKLGTQILSQAVKVGLGSDVSVVNSAITLYSRCGRIEE 411
Query: 487 AYEFIKKIPMAPDSVMWGALLGGCVSHG 514
A I + + W +++GG +G
Sbjct: 412 AQNLFDSIQ-EKNLISWNSIMGGYAQNG 438
>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 736
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 179/542 (33%), Positives = 290/542 (53%), Gaps = 38/542 (7%)
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W+ +I G+ NG +++ + M G + T VL AC L + +G+ H +
Sbjct: 129 WNFMIRGYASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLLVEIGRRVHSEVV 188
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
G S+ +V N L+ +Y + GDM AR
Sbjct: 189 VCGLESDIYVGNSLLAMYAKFGDM-------------------------------GTARM 217
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
+FD+M +R + SWN+MISGY N+ AF +F DL+ + G+ T +L AC
Sbjct: 218 VFDRM----AERDLTSWNTMISGYAKNADSGTAFLVF-DLMGKAGLFADCTTLLGLLSAC 272
Query: 242 ADMNSLRKGKEIHALAIALGLQS-DTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
AD+ ++++GK IH A+ + + + F +L+EMYC +V A+ F+ + + +
Sbjct: 273 ADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSLIEMYCNCNCMVDARRLFERVRWKDTVSW 332
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G+ N + +++LF M PD T +L AC +A + G +H+Y ++
Sbjct: 333 NSMILGYARNGDAFESLRLFRRMALDGSGPDQVTFIAVLGACDQIAALRYGMSIHSYLVK 392
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
G+D++ +GTALVDMY+KCGSL +R + + LVS +AM+ Y +HG G+E I+
Sbjct: 393 KGFDANTIVGTALVDMYSKCGSLACSRRVFDEMPDKSLVSWSAMVAGYGLHGRGREAISI 452
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSE-FFDLMAYYDVKPSLKHYTCMVDLLS 479
+ A+ PD+ F S LSAC HAG + G E F+ + Y+VKP+L HY+CMVDLL
Sbjct: 453 LDGMKANSVIPDNGVFTSILSACSHAGLVVEGKEIFYKMEKEYNVKPALSHYSCMVDLLG 512
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
RAG L EAY I+ + + P S +W ALL H N++ +I+A ++ ++ P +Y+
Sbjct: 513 RAGHLDEAYVIIRTMEIKPTSDIWAALLTASRLHKNIKLAEISAQKVFDMNPKVVSSYIC 572
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTI 599
L+N++A RW D+ R R ++ + + KSPGCS+IE + +H+F D+SH ++E+IY
Sbjct: 573 LSNIYAAEKRWDDVERVRAMVRRKGLKKSPGCSFIELDNMVHRFLVGDKSHQQTEDIYAK 632
Query: 600 ID 601
++
Sbjct: 633 LN 634
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 105/363 (28%), Positives = 178/363 (49%), Gaps = 9/363 (2%)
Query: 155 FSI-KNEVSCNTIIVG-YCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYD 212
FSI +N NT + Y G +++A +FD + V + WN MI GY N L
Sbjct: 88 FSILENNTYLNTKLAAFYAGCGLMSQAEVIFDGI----VLKNSFLWNFMIRGYASNGLPM 143
Query: 213 EAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGAL 272
++ ++R++L G +FT+ VL AC D+ + G+ +H+ + GL+SD +VG +L
Sbjct: 144 KSLVLYREMLCF-GQRADNFTYPFVLKACGDLLLVEIGRRVHSEVVVCGLESDIYVGNSL 202
Query: 273 VEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDI 332
+ MY ++ D+ A+M FD + + G+ N + A +F M L D
Sbjct: 203 LAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNADSGTAFLVFDLMGKAGLFADC 262
Query: 333 YTVGIILSACSSLATMERGKQVHAYAIRCGY-DSDVHIGTALVDMYAKCGSLKHARLAYK 391
T+ +LSAC+ L ++ GK +H YA+R + + +L++MY C + AR ++
Sbjct: 263 TTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSLIEMYCNCNCMVDARRLFE 322
Query: 392 RISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKT 451
R+ D VS N+M+ YA +G E + FRR+ G PD ++F++ L AC +++
Sbjct: 323 RVRWKDTVSWNSMILGYARNGDAFESLRLFRRMALDGSGPDQVTFIAVLGACDQIAALRY 382
Query: 452 GSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCV 511
G + + T +VD+ S+ G L + ++P V W A++ G
Sbjct: 383 GMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACSRRVFDEMP-DKSLVSWSAMVAGYG 441
Query: 512 SHG 514
HG
Sbjct: 442 LHG 444
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 168/377 (44%), Gaps = 45/377 (11%)
Query: 230 TSFTFGSVLIACADMNSLRKGKEIHALAIALG-LQSDTFVGGALVEMYCRYQDLVAAQMA 288
TS G++L + + S ++G+++HA I+ L+++T++ L Y + A++
Sbjct: 58 TSLQCGALLQSFTNTKSFKQGQQLHAHMISFSILENNTYLNTKLAAFYAGCGLMSQAEVI 117
Query: 289 FDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATM 348
FD I + L G+ N ++ L+ EML D +T +L AC L +
Sbjct: 118 FDGIVLKNSFLWNFMIRGYASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLLV 177
Query: 349 ERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAY 408
E G++VH+ + CG +SD+++G +L+ MYAK G + AR+ + R++ DL S N M++ Y
Sbjct: 178 EIGRRVHSEVVVCGLESDIYVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGY 237
Query: 409 AMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSL 468
A + F + +G D + L LSAC ++K G ++ Y V+ S+
Sbjct: 238 AKNADSGTAFLVFDLMGKAGLFADCTTLLGLLSACADLKAVKEGK----VIHGYAVRNSI 293
Query: 469 KHY---------------TCMVDL---------------------LSRAGELGEAYEFIK 492
+Y CMVD +R G+ E+ +
Sbjct: 294 GNYNKFFTNSLIEMYCNCNCMVDARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFR 353
Query: 493 KIPM---APDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPN-NTGNYVMLANLFAYAG 548
++ + PD V + A+LG C L +G L++ + NT L ++++ G
Sbjct: 354 RMALDGSGPDQVTFIAVLGACDQIAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCG 413
Query: 549 RWSDLARTRQKMKDRRM 565
+ R +M D+ +
Sbjct: 414 SLACSRRVFDEMPDKSL 430
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 101/221 (45%), Gaps = 42/221 (19%)
Query: 33 CAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEP 92
C N +V +A ER+ D VSW+++I G+ +NG E++ + RM +G P
Sbjct: 309 CNCNCMV-DARRLFERVRWKDT-----VSWNSMILGYARNGDAFESLRLFRRMALDGSGP 362
Query: 93 NARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIF 152
+ T +VL AC ++ L G H Y+ + GF +N V LVD+Y +CG + + ++F
Sbjct: 363 DQVTFIAVLGACDQIAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACSRRVF 422
Query: 153 SKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYD 212
+ K+ VS + ++ GY +G EA + D M+ NS+I
Sbjct: 423 DEMPDKSLVSWSAMVAGYGLHGRGREAISILDGMKA----------NSVI---------- 462
Query: 213 EAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEI 253
P + F S+L AC+ + +GKEI
Sbjct: 463 ----------------PDNGVFTSILSACSHAGLVVEGKEI 487
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 65/144 (45%), Gaps = 39/144 (27%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWN--------------------------------- 27
MY KCGSL +++VF MP++ VSW+
Sbjct: 408 MYSKCGSLACSRRVFDEMPDKSLVSWSAMVAGYGLHGRGREAISILDGMKANSVIPDNGV 467
Query: 28 --SVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRM 85
S+++AC+ GLV+E E +M N P L +S ++ + G+ +EA ++ M
Sbjct: 468 FTSILSACSHAGLVVEGKEIFYKMEKEYNVKPALSHYSCMVDLLGRAGHLDEAYVIIRTM 527
Query: 86 QAEGLEPNARTLSSVLPACARLQK 109
+ ++P + +++L A +RL K
Sbjct: 528 E---IKPTSDIWAALLTA-SRLHK 547
>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1092
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 197/600 (32%), Positives = 313/600 (52%), Gaps = 48/600 (8%)
Query: 5 CGSLDDAKKV----FKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
C SL D KKV FKM E D S+V + G++ A + +D ++
Sbjct: 134 CVSLVDGKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVF-----VDMPVKDVG 188
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A+I GF QNG A+G+L RM+ EG++ + T++S+LP CA+ + G H ++
Sbjct: 189 SWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHV 248
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
++G S+ FV N L+++Y SKF G + +A+
Sbjct: 249 LKHGLDSDVFVSNALINMY-------------SKF------------------GRLQDAQ 277
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+FDQME R ++SWNS+I+ Y N+ A F+ + + GI P T S+
Sbjct: 278 MVFDQME----VRDLVSWNSIIAAYEQNNDPSTALRFFKGMQL-GGIRPDLLTVVSLTSI 332
Query: 241 CADMNSLRKGKEIHALAIALG-LQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
+ ++ R + I I L D +G ALV MY + + A FD++ + +
Sbjct: 333 FSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTIS 392
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSL-DLTPDIYTVGIILSACSSLATMERGKQVHAYA 358
G+ N A+ ++ M D P+ T I+ A S + +++G ++HA
Sbjct: 393 WNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKL 452
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGI 418
I+ DV + T L+D+Y KCG L+ A + I V NA++ + +HG G+E +
Sbjct: 453 IKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEAL 512
Query: 419 AHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDL 477
F+ +LA + DHI+F+S LSAC H+G + G + FD+M Y +KPSLKHY CMVDL
Sbjct: 513 QLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDL 572
Query: 478 LSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNY 537
L RAG L +AYE ++ +P+ PD+ +WGALL C +GN E G +A+DRL+E++ N G Y
Sbjct: 573 LGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLLEVDSENVGYY 632
Query: 538 VMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
V+L+N++A +W + + R +DR + K+PG S + + F +++H + EIY
Sbjct: 633 VLLSNIYANTEKWEGVIKVRSLARDRGLRKTPGWSSVVVGSKAEVFYTGNQTHPKYTEIY 692
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/361 (26%), Positives = 166/361 (45%), Gaps = 12/361 (3%)
Query: 158 KNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSM 217
+N V +I Y +G+++ +R FD + ++ I SWNS+IS YV Y EA +
Sbjct: 52 QNIVLSTKLINLYVTHGDISLSRSTFDYIH----KKNIFSWNSIISAYVRFGKYHEAMNC 107
Query: 218 FRDLLMRDG---IEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVE 274
L G + P +TF +L AC SL GK++H +G + D FV +LV
Sbjct: 108 VNQLFSMCGGGHLRPDFYTFPPILKACV---SLVDGKKVHCCVFKMGFEDDVFVAASLVH 164
Query: 275 MYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYT 334
+Y RY L A F ++ + GF N A+ + + M + D T
Sbjct: 165 LYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTIT 224
Query: 335 VGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS 394
V IL C+ + G +H + ++ G DSDV + AL++MY+K G L+ A++ + ++
Sbjct: 225 VASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQME 284
Query: 395 TPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSE 454
DLVS N+++ AY + + F+ + G RPD ++ +S S +
Sbjct: 285 VRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRS 344
Query: 455 FFDLMAYYD-VKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSH 513
+ + + + +V++ ++ G + A+ ++P D++ W L+ G +
Sbjct: 345 ILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRK-DTISWNTLVTGYTQN 403
Query: 514 G 514
G
Sbjct: 404 G 404
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 109/432 (25%), Positives = 178/432 (41%), Gaps = 82/432 (18%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G L DA+ VF M RD VSWNS++ A
Sbjct: 266 MYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAA---------------------------- 297
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+ QN A+ MQ G+ P+ T+ S+ ++L + + G++
Sbjct: 298 --------YEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFV 349
Query: 121 TRNGFMSNPFVV-NGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
R ++ V+ N LV++Y + G M A +F + K+ +S NT++ GY +NG +EA
Sbjct: 350 IRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEA 409
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
+ ++ ME RD I P T+ S++
Sbjct: 410 IDAYNMMEE----------------------------------CRDTI-PNQGTWVSIIP 434
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
A + + +L++G +IHA I L D FV L+++Y + L A F EI ++
Sbjct: 435 AYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVP 494
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV----- 354
+ A+QLF +ML+ + D T +LSACS ++ G++
Sbjct: 495 WNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQ 554
Query: 355 HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHA-RLAYKRISTPDLVSQNAMLTAYAMHGH 413
Y I+ S H G +VD+ + G L+ A L PD A+L+A ++G+
Sbjct: 555 KEYGIK---PSLKHYG-CMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGN 610
Query: 414 GKEGIAHFRRIL 425
+ G R+L
Sbjct: 611 AELGTLASDRLL 622
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 123/297 (41%), Gaps = 38/297 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G ++ A VF +P +D +SWN++VT NGL EA++ M + PN
Sbjct: 368 MYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQG 427
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W S++PA + + L G + H +
Sbjct: 428 TW-----------------------------------VSIIPAYSHVGALQQGMKIHAKL 452
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+N + FV L+D+Y +CG + A+ +F + V N II +G EA
Sbjct: 453 IKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEAL 512
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+LF M V+ I++ S++S + L DE F + GI+P+ +G ++
Sbjct: 513 QLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDL 572
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
L K E L + +Q D + GAL+ Y + +A D + +++
Sbjct: 573 LGRAGYLEKAYE---LVRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLLEVDS 626
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 128/294 (43%), Gaps = 39/294 (13%)
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
F ++ +C ++N+ +K +HAL + G + + L+ +Y + D+ ++ FD I
Sbjct: 25 FNALFNSCVNVNATKK---LHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIH 81
Query: 294 NIENLLGKMKEDGFEPNVYTWNAM------------------QLFSEMLSLDLTPDIYTV 335
+ N+++WN++ QLFS L PD YT
Sbjct: 82 --------------KKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTF 127
Query: 336 GIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST 395
IL AC SL GK+VH + G++ DV + +LV +Y++ G L A + +
Sbjct: 128 PPILKACVSLVD---GKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPV 184
Query: 396 PDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEF 455
D+ S NAM++ + +G+ + R+ G + D I+ S L C + + G
Sbjct: 185 KDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLI 244
Query: 456 FDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
+ + + + ++++ S+ G L +A ++ + D V W +++
Sbjct: 245 HLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVR-DLVSWNSIIAA 297
>gi|125577145|gb|EAZ18367.1| hypothetical protein OsJ_33897 [Oryza sativa Japonica Group]
Length = 730
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 172/558 (30%), Positives = 293/558 (52%), Gaps = 51/558 (9%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
N+V+W+A++ G+T N + + M G P+ TL + L AC + LGK+ H
Sbjct: 103 NVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGKQVH 162
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
GY + G S + N L +Y + G + SAL+ F + KN
Sbjct: 163 GYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKN------------------ 204
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYV-DNSLYDEAFSMFRDLLMRDGIEPTSFTFGS 236
+I+W +MIS D + S+F D+LM DG+ P FT S
Sbjct: 205 -----------------VITWTTMISACAEDEECVELGMSLFIDMLM-DGVMPNEFTLTS 246
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
V+ C L GK++ A + +G +++ V + + +Y R + A F+++E+
Sbjct: 247 VMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDAS 306
Query: 297 ------------NLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSS 344
++ K+D + + A+ +F ++ + PD++T ILS CS+
Sbjct: 307 IITWNAMISGYAQIMDSAKDD-LQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSA 365
Query: 345 LATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAM 404
+ +E+G+Q+HA I+ G+ SDV + +ALV+MY KCG ++ A A+ + T V+ +M
Sbjct: 366 MMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSM 425
Query: 405 LTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YD 463
++ Y+ HG +E I F + +G RP+ I+F+S LSAC +AG ++ +FD+M Y
Sbjct: 426 ISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYC 485
Query: 464 VKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAA 523
++P + HY CM+D+ R G + +A+ FIK+ P+ +W +L+ GC SHGN+E AA
Sbjct: 486 IEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAA 545
Query: 524 DRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKF 583
D+L+EL+P Y++L N++ RW D+AR R+ MK + SWI +D+++ F
Sbjct: 546 DKLLELKPKGIETYILLLNMYISTERWQDVARVRKLMKQEDVGILRDRSWITIKDKVYFF 605
Query: 584 RASDRSHDRSEEIYTIID 601
RA+DR+H ++ E+Y +++
Sbjct: 606 RANDRTHPQATELYQLLE 623
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 116/430 (26%), Positives = 186/430 (43%), Gaps = 92/430 (21%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y K GSLD A + F +PE++ ++W ++++ACA E EC+E
Sbjct: 183 LYAKLGSLDSALRAFWRIPEKNVITWTTMISACA------EDEECVEL------------ 224
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+ + M +G+ PN TL+SV+ C L+LGK+ +
Sbjct: 225 -----------------GMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFS 267
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G +N V N + +Y R G+ A+++F
Sbjct: 268 FKIGCETNLPVKNSTMYLYLRKGETDEAMRLF---------------------------- 299
Query: 181 ELFDQMEHLGVQRGIISWNSMISGY---VDNSLYD--------EAFSMFRDLLMRDGIEP 229
+QME II+WN+MISGY +D++ D +A ++FRD L R ++P
Sbjct: 300 ---EQME----DASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRD-LKRSVMKP 351
Query: 230 TSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAF 289
FTF S+L C+ M +L +G++IHA I G SD V ALV MY + + A AF
Sbjct: 352 DLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAF 411
Query: 290 DEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATME 349
E+ + G+ + A+QLF EM + P+ T +LSACS +E
Sbjct: 412 LEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVE 471
Query: 350 RGKQV-----HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNA 403
+ Y I D H G ++DM+ + G ++ A KR P+ ++
Sbjct: 472 EAEHYFDMMKKEYCIEPVVD---HYG-CMIDMFVRLGRVEDAFSFIKRTGFEPNEAIWSS 527
Query: 404 MLTAYAMHGH 413
++ HG+
Sbjct: 528 LVAGCRSHGN 537
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 97/399 (24%), Positives = 181/399 (45%), Gaps = 49/399 (12%)
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
+AR LFD M +R +++W ++++GY NS +F ++L G P+ +T G+
Sbjct: 91 DARRLFDGMP----ERNVVTWTALVTGYTLNSQPALGLEVFVEML-EMGRYPSHYTLGAT 145
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
L AC + GK++H AI G +S T +G +L +Y + L +A AF I
Sbjct: 146 LNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIP---- 201
Query: 298 LLGKMKEDGFEPNVYTWNA---------------MQLFSEMLSLDLTPDIYTVGIILSAC 342
E NV TW M LF +ML + P+ +T+ ++S C
Sbjct: 202 ----------EKNVITWTTMISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLC 251
Query: 343 SSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQN 402
+ + GKQV A++ + G ++++ + + + +Y + G A ++++ +++ N
Sbjct: 252 GTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWN 311
Query: 403 AMLTAYAM-----------HGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKT 451
AM++ YA G + + FR + S +PD +F S LS C +++
Sbjct: 312 AMISGYAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQ 371
Query: 452 GSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCV 511
G + + + +V++ ++ G + +A + ++P V W +++ G
Sbjct: 372 GEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMP-TRTFVTWTSMISGYS 430
Query: 512 SHGN-LEFGQIAAD-RLIELEPNNTGNYVMLANLFAYAG 548
HG E Q+ + RL + PN +V L + +YAG
Sbjct: 431 QHGQPQEAIQLFEEMRLAGVRPNEI-TFVSLLSACSYAG 468
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 90/200 (45%), Gaps = 12/200 (6%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG + DA K F MP R V+W S+++ + +G EA++ E M L PN +
Sbjct: 397 MYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEM-RLAGVRPNEI 455
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
++ +++ + G EEA M+ E +EP ++ RL ++ ++ +
Sbjct: 456 TFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRV---EDAFSF 512
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKF------SIKNEVSCNTIIVGYCEN 173
I R GF N + + LV R G+M A K I+ + + +
Sbjct: 513 IKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLELKPKGIETYILLLNMYISTERW 572
Query: 174 GNVAEARELFDQMEHLGVQR 193
+VA R+L Q E +G+ R
Sbjct: 573 QDVARVRKLMKQ-EDVGILR 591
Score = 42.7 bits (99), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 25/127 (19%), Positives = 53/127 (41%), Gaps = 1/127 (0%)
Query: 384 KHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSAC 443
+ AR + + ++V+ A++T Y ++ G+ F +L G P H + + L+AC
Sbjct: 90 RDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNAC 149
Query: 444 VHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMW 503
+ + + G + Y + + L ++ G L A +IP + + W
Sbjct: 150 LASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIP-EKNVITW 208
Query: 504 GALLGGC 510
++ C
Sbjct: 209 TTMISAC 215
>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
Length = 920
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 187/638 (29%), Positives = 330/638 (51%), Gaps = 79/638 (12%)
Query: 2 YGKCGSLDDAKKVFKMMP----ERDCVSWNSVVTACAANG----------LVLEA----- 42
+ +CG + A ++F M DCV+ S++ ACA+ G +L+A
Sbjct: 220 HAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFD 279
Query: 43 ----------------LECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQ 86
+E + +L + T N+V W+ ++ + Q ++ + +MQ
Sbjct: 280 YITEGSLLDLYVKCGDIETAHDIFNLGDRT-NVVLWNLMLVAYGQISDLAKSFEIFGQMQ 338
Query: 87 AEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYR--RCGD 144
A G+ PN T +L C ++ LG++ H +NGF S+ +V L+D+Y RC D
Sbjct: 339 ATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLD 398
Query: 145 MLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISG 204
+AR++ + +E +R ++SW SMI+G
Sbjct: 399 ---------------------------------KARKILEMLE----KRDVVSWTSMIAG 421
Query: 205 YVDNSLYDEAFSMFRDLLMRD-GIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQ 263
YV + +EA + F++ M+D G+ P + S ACA + ++R+G +IHA G
Sbjct: 422 YVQHDFCEEALATFKE--MQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYA 479
Query: 264 SDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEM 323
+D + LV +Y R A F EI++ + + GF + A+ +F +M
Sbjct: 480 ADISIWNTLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRLYEQALMVFMKM 539
Query: 324 LSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSL 383
+++T +SA ++LA +++GKQVH A++ G+ S+ + AL+ +Y KCGS+
Sbjct: 540 SQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSI 599
Query: 384 KHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSAC 443
+ A++ + +S + VS N ++T+ + HG G E + F ++ G +P+ ++F+ L+AC
Sbjct: 600 EDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAAC 659
Query: 444 VHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVM 502
H G ++ G +F M+ Y + P HY C+VD+L RAG+L A F+ ++P+ ++++
Sbjct: 660 SHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMI 719
Query: 503 WGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKD 562
W LL C H N+E G++AA L+ELEP+++ +YV+L+N +A G+W++ + R+ MKD
Sbjct: 720 WRTLLSACKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMKD 779
Query: 563 RRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTII 600
R + K PG SWIE ++ +H F DR H S++IY +
Sbjct: 780 RGIRKEPGRSWIEVKNAVHAFFVGDRLHPLSDQIYKFL 817
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 132/497 (26%), Positives = 228/497 (45%), Gaps = 70/497 (14%)
Query: 27 NSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQ 86
N ++ A NGLV +A + + +SS D+ VSW A++ G+ Q G +EA + +M
Sbjct: 82 NLLIDLYAKNGLVWQARQVFKELSSRDH-----VSWVAMLSGYAQRGLGKEAFRLYSQMH 136
Query: 87 AEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDML 146
+ P LSSVL AC + + + G+ H + + F S FV N L+ +Y G
Sbjct: 137 WTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFK 196
Query: 147 SALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYV 206
A ++F + V+ NT+I G+ + G+ A ++FD+M+
Sbjct: 197 LAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQ------------------- 237
Query: 207 DNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDT 266
G+ P T S+L ACA + L+KGK++H+ + G+ D
Sbjct: 238 -----------------LSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDY 280
Query: 267 FVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAM--------- 317
G+L+++Y + D+ A +I NL G NV WN M
Sbjct: 281 ITEGSLLDLYVKCGDIETAH-------DIFNL-------GDRTNVVLWNLMLVAYGQISD 326
Query: 318 -----QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTA 372
++F +M + + P+ +T IL C+ +E G+Q+H+ +I+ G++SD+++
Sbjct: 327 LAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGV 386
Query: 373 LVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPD 432
L+DMY+K L AR + + D+VS +M+ Y H +E +A F+ + G PD
Sbjct: 387 LIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPD 446
Query: 433 HISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIK 492
+I SA SAC +++ G + + + + +V+L +R G EA+ +
Sbjct: 447 NIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFR 506
Query: 493 KIPMAPDSVMWGALLGG 509
+I D + W L+ G
Sbjct: 507 EIDH-KDEITWNGLISG 522
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 117/456 (25%), Positives = 216/456 (47%), Gaps = 39/456 (8%)
Query: 60 VSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
V+++ +I G Q G+ E A+ + MQ GL P+ T++S+L ACA + L GK+ H Y
Sbjct: 211 VTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSY 270
Query: 120 ITRNGFMSNPFVVNG-LVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
+ + G MS ++ G L+D+Y +CGD+ +A IF+ N V N ++V Y + ++A+
Sbjct: 271 LLKAG-MSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAK 329
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
+ E+F QM+ GI P FT+ +L
Sbjct: 330 SFEIFGQMQ------------------------------------ATGIHPNKFTYPCIL 353
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
C + G++IH+L+I G +SD +V G L++MY +Y+ L A+ + +E + +
Sbjct: 354 RTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVV 413
Query: 299 LGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYA 358
G+ + + A+ F EM + PD + SAC+ + M +G Q+HA
Sbjct: 414 SWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARV 473
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGI 418
GY +D+ I LV++YA+CG + A ++ I D ++ N +++ + ++ +
Sbjct: 474 YVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRLYEQAL 533
Query: 419 AHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLL 478
F ++ +G + + +F+SA+SA + IK G + + ++ L
Sbjct: 534 MVFMKMSQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLY 593
Query: 479 SRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
+ G + +A ++ + + V W ++ C HG
Sbjct: 594 GKCGSIEDAKMIFSEMSLR-NEVSWNTIITSCSQHG 628
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 141/304 (46%), Gaps = 18/304 (5%)
Query: 234 FGSVLIACADMNSLRKGK------EIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQM 287
GS + CA +G EIHA ++ GL +D +G L+++Y + + A+
Sbjct: 40 LGSADLTCALQACRGRGNRWPLVLEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQ 99
Query: 288 AFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLAT 347
F E+ + +++ G+ A +L+S+M + P Y + +LSAC+
Sbjct: 100 VFKELSSRDHVSWVAMLSGYAQRGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKL 159
Query: 348 MERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTA 407
+G+ +HA + + S+ +G AL+ +Y GS K A + + D V+ N +++
Sbjct: 160 FAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISG 219
Query: 408 YAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPS 467
+A GHG+ + F + SG RPD ++ S L+AC G ++ G + + +
Sbjct: 220 HAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFD 279
Query: 468 LKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE--------FG 519
++DL + G++ A++ I + + V+W +L V++G + FG
Sbjct: 280 YITEGSLLDLYVKCGDIETAHD-IFNLGDRTNVVLWNLML---VAYGQISDLAKSFEIFG 335
Query: 520 QIAA 523
Q+ A
Sbjct: 336 QMQA 339
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 121/303 (39%), Gaps = 65/303 (21%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSS--------- 51
MY K LD A+K+ +M+ +RD VSW S++ + EAL + M
Sbjct: 390 MYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIG 449
Query: 52 -------------------------LDNETPNLVSWSAVIGGFTQNGYDEEAIGM----- 81
+ ++ W+ ++ + + G EEA +
Sbjct: 450 LASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREID 509
Query: 82 --------------------------LFRMQAEGLEPNARTLSSVLPACARLQKLSLGKE 115
+M G + N T S + A A L + GK+
Sbjct: 510 HKDEITWNGLISGFGQSRLYEQALMVFMKMSQAGAKYNVFTFISAISALANLADIKQGKQ 569
Query: 116 FHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGN 175
HG + G S V N L+ +Y +CG + A IFS+ S++NEVS NTII ++G
Sbjct: 570 VHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGR 629
Query: 176 VAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFG 235
EA +LFDQM+ G++ +++ +++ L +E S F+ + G+ P +
Sbjct: 630 GLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYA 689
Query: 236 SVL 238
V+
Sbjct: 690 CVV 692
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 63/117 (53%), Gaps = 2/117 (1%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+YGKCGS++DAK +F M R+ VSWN+++T+C+ +G LEAL+ ++M + PN V
Sbjct: 592 LYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQ-EGLKPNDV 650
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRM-QAEGLEPNARTLSSVLPACARLQKLSLGKEF 116
++ V+ + G EE + M GL P + V+ R +L + F
Sbjct: 651 TFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRF 707
>gi|449500331|ref|XP_004161068.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g33680-like [Cucumis sativus]
Length = 710
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 187/597 (31%), Positives = 304/597 (50%), Gaps = 73/597 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G + DA+KVF +PER N V
Sbjct: 157 MYCKIGCMLDARKVFDTIPER------------------------------------NTV 180
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ +I G+ EA + M+ E + +SVL A + GK+ H
Sbjct: 181 SWATIISGYAMERMAFEAWELFXLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLA 240
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+NG +S V N LV +Y +CG + ALK F K++
Sbjct: 241 LKNGLLSIASVGNALVTMYGKCGCLDDALKTFELSGDKDD-------------------- 280
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
I+W++MI+GY EA ++F ++ + +G +P+ FTF V+ A
Sbjct: 281 ---------------ITWSAMITGYAQAGDSHEALNLFYNMHL-NGNKPSEFTFVGVINA 324
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C+D+ +L +GK+IH ++ G + + ALV+MY + LV A+ FD ++ + +L
Sbjct: 325 CSDIGALEEGKQIHGYSLKAGYECQIYFMTALVDMYAKCGSLVDARKGFDYLKEPDIVLW 384
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G+ N A+ L+ M + P T+ +L ACSSLA +E+GKQ+HA I+
Sbjct: 385 TSMISGYAQNGENETALTLYCRMQMERIMPHELTMASVLRACSSLAALEQGKQIHAQTIK 444
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
G+ +V IG+AL MYAKCGSL+ L ++R+ + D+++ NAM++ + +G G + +
Sbjct: 445 YGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSRDIMTWNAMISGLSQNGEGLKALEL 504
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLLS 479
F + +PD+++F++ LSAC H G ++ G +F +M + + P ++HY CMVD+LS
Sbjct: 505 FEELRHGTTKPDYVTFVNVLSACSHMGLVERGKVYFRMMLDEFGIVPRVEHYACMVDILS 564
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
RAG+L E EFI+ + +W LLG C ++ N E G A ++L+EL + Y++
Sbjct: 565 RAGKLHETKEFIESATIDHGMCLWRILLGACRNYRNYELGAYAGEKLMELGSQESSAYIL 624
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEI 596
L++++ GR D+ R R+ MK R ++K PGCSWIE + ++H F D+ H + +I
Sbjct: 625 LSSIYTALGRSDDVERVRRLMKLRGVNKEPGCSWIELKSQVHVFVVGDQIHPQIVKI 681
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 141/522 (27%), Positives = 241/522 (46%), Gaps = 48/522 (9%)
Query: 27 NSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGM-LF-R 84
NS+V A G +++A E +++ D +VSW+ +I G++Q G + M LF R
Sbjct: 49 NSLVNLYAKCGSIVKAKLVFESITNKD-----VVSWNCLINGYSQKGTVGYSFVMELFQR 103
Query: 85 MQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGD 144
M+AE PN T S V A + + G + H + + FV + L+++Y + G
Sbjct: 104 MRAENTLPNGHTFSGVFTAASSSPETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGC 163
Query: 145 MLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISG 204
ML +AR++FD + +R +SW ++ISG
Sbjct: 164 ML-------------------------------DARKVFDTIP----ERNTVSWATIISG 188
Query: 205 YVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQS 264
Y + EA+ +F L+ R+ F + SVL A + + GK+IH LA+ GL S
Sbjct: 189 YAMERMAFEAWELFX-LMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLS 247
Query: 265 DTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEML 324
VG ALV MY + L A F+ + +++ G+ + A+ LF M
Sbjct: 248 IASVGNALVTMYGKCGCLDDALKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMH 307
Query: 325 SLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLK 384
P +T +++ACS + +E GKQ+H Y+++ GY+ ++ TALVDMYAKCGSL
Sbjct: 308 LNGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFMTALVDMYAKCGSLV 367
Query: 385 HARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACV 444
AR + + PD+V +M++ YA +G + + + R+ P ++ S L AC
Sbjct: 368 DARKGFDYLKEPDIVLWTSMISGYAQNGENETALTLYCRMQMERIMPHELTMASVLRACS 427
Query: 445 HAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWG 504
+++ G + Y + + + + ++ G L + +++P + D + W
Sbjct: 428 SLAALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMP-SRDIMTWN 486
Query: 505 ALLGGCVSHGNLEFGQIAADRLIELEPNNTG-NYVMLANLFA 545
A++ G +G G A + EL T +YV N+ +
Sbjct: 487 AMISGLSQNGE---GLKALELFEELRHGTTKPDYVTFVNVLS 525
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 119/435 (27%), Positives = 198/435 (45%), Gaps = 49/435 (11%)
Query: 90 LEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSAL 149
L P R+ +L C R + L GK H + R G S+ ++ N LV++Y +CG ++ A
Sbjct: 6 LPPQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAK 65
Query: 150 KIFSKFSIKNEVSCNTIIVGYCENGNVAEA--RELFDQMEHLGVQRGIISWNSMISGYVD 207
+F + K+ VS N +I GY + G V + ELF +M +
Sbjct: 66 LVFESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMR------------------AE 107
Query: 208 NSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTF 267
N+L P TF V A + G + HALAI D F
Sbjct: 108 NTL------------------PNGHTFSGVFTAASSSPETFGGLQAHALAIKTSNFYDVF 149
Query: 268 VGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLD 327
VG +L+ MYC+ ++ A+ FD I + G+ + A +LF M +
Sbjct: 150 VGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYAMERMAFEAWELFXLMRREE 209
Query: 328 LTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHAR 387
D + +LSA + + GKQ+H A++ G S +G ALV MY KCG L A
Sbjct: 210 GAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIASVGNALVTMYGKCGCLDDAL 269
Query: 388 LAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAG 447
++ D ++ +AM+T YA G E + F + +G +P +F+ ++AC G
Sbjct: 270 KTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNGNKPSEFTFVGVINACSDIG 329
Query: 448 SIKTGSEF--FDLMAYYDVKPSLKHYTCMVDLLSRAGELGEA---YEFIKKIPMAPDSVM 502
+++ G + + L A Y+ + + T +VD+ ++ G L +A ++++K+ PD V+
Sbjct: 330 ALEEGKQIHGYSLKAGYECQ--IYFMTALVDMYAKCGSLVDARKGFDYLKE----PDIVL 383
Query: 503 WGALLGGCVSHGNLE 517
W +++ G +G E
Sbjct: 384 WTSMISGYAQNGENE 398
>gi|15217514|ref|NP_177305.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169720|sp|Q9C9I6.1|PP116_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g71490
gi|12323739|gb|AAG51835.1|AC016163_24 unknown protein; 40702-42747 [Arabidopsis thaliana]
gi|56381899|gb|AAV85668.1| At1g71490 [Arabidopsis thaliana]
gi|56790238|gb|AAW30036.1| At1g71490 [Arabidopsis thaliana]
gi|332197086|gb|AEE35207.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 681
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 183/550 (33%), Positives = 288/550 (52%), Gaps = 15/550 (2%)
Query: 60 VSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
+ W+ +I + +N EE I RM ++G+ P+A T SVL AC ++ G+ HG
Sbjct: 110 LPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGS 169
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
I + + S+ +V N L+ +Y+R +M A ++F + ++ VS N +I Y G +EA
Sbjct: 170 IEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEA 229
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRD---GIEPTSFTFGS 236
ELFD+M GV+ +I+WN + G + Y A + MR+ ++P + G
Sbjct: 230 FELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISR--MRNFPTSLDPVAMIIG- 286
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
L AC+ + ++R GKEIH LAI V L+ MY + +DL A + F + E E
Sbjct: 287 -LKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTE--E 343
Query: 297 NLLGKMKE--DGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV 354
N L G+ + A L EML P+ T+ IL C+ +A ++ GK+
Sbjct: 344 NSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEF 403
Query: 355 HAYAIR--CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHG 412
H Y +R C D + + +LVD+YAK G + A+ +S D V+ +++ Y G
Sbjct: 404 HCYILRRKCFKDYTM-LWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQG 462
Query: 413 HGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFF-DLMAYYDVKPSLKHY 471
G +A F+ + SG +PDH++ ++ LSAC H+ + G F + Y ++P L+H+
Sbjct: 463 EGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHF 522
Query: 472 TCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEP 531
+CMVDL RAG L +A + I +P P W LL C HGN + G+ AA++L+E++P
Sbjct: 523 SCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKP 582
Query: 532 NNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHD 591
N G YV++AN++A AG WS LA R M+D + K PGC+WI+ F D S
Sbjct: 583 ENPGYYVLIANMYAAAGSWSKLAEVRTIMRDLGVKKDPGCAWIDTDSGFSLFSVGDTSSP 642
Query: 592 RSEEIYTIID 601
+ Y ++D
Sbjct: 643 EACNTYPLLD 652
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 112/423 (26%), Positives = 192/423 (45%), Gaps = 46/423 (10%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY + ++ A+++F M ERD VSWN+V+ A+ G+ EA E ++M E +++
Sbjct: 188 MYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEV-SVI 246
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQ--AEGLEPNARTLSSVLPACARLQKLSLGKEFHG 118
+W+ + GG Q G A+G++ RM+ L+P A + L AC+ + + LGKE HG
Sbjct: 247 TWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIG--LKACSLIGAIRLGKEIHG 304
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
+ + V N L+ +Y +C D+ AL +F + + + N+II GY + E
Sbjct: 305 LAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEE 364
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
A L +M + G +P S T S+L
Sbjct: 365 ASHLLREM------------------------------------LVAGFQPNSITLASIL 388
Query: 239 IACADMNSLRKGKEIHALAIALGLQSD-TFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
CA + +L+ GKE H + D T + +LV++Y + +VAA+ D + +
Sbjct: 389 PLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDE 448
Query: 298 LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAY 357
+ DG+ A+ LF EM + PD TV +LSACS + G+++
Sbjct: 449 VTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFM- 507
Query: 358 AIRCGYDSD--VHIGTALVDMYAKCGSLKHAR-LAYKRISTPDLVSQNAMLTAYAMHGHG 414
++C Y + + +VD+Y + G L A+ + + P + +L A +HG+
Sbjct: 508 KMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNT 567
Query: 415 KEG 417
+ G
Sbjct: 568 QIG 570
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 93/214 (43%)
Query: 235 GSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIEN 294
S+L AC D+ + G ++HA I+ G++ + + LV Y + AQ + +
Sbjct: 47 ASLLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDI 106
Query: 295 IENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV 354
+ L + + N + + M+S + PD +T +L AC + G+ V
Sbjct: 107 LHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVV 166
Query: 355 HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHG 414
H Y S +++ AL+ MY + ++ AR + R+ D VS NA++ YA G
Sbjct: 167 HGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMW 226
Query: 415 KEGIAHFRRILASGFRPDHISFLSALSACVHAGS 448
E F ++ SG I++ C+ G+
Sbjct: 227 SEAFELFDKMWFSGVEVSVITWNIISGGCLQTGN 260
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 98/224 (43%), Gaps = 5/224 (2%)
Query: 293 ENIENLLGKMKEDGFEPNVY-TWNAMQL-FSEMLSLDLTPDIYTVGIILSACSSLATMER 350
E++ LG + G + + T++ ++L S +S DL +++ +LSAC +
Sbjct: 4 ESLFKSLGHLASHGHLHDAFKTFSLLRLQSSSAVSDDLV--LHSAASLLSACVDVRAFLA 61
Query: 351 GKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAM 410
G QVHA+ I G + + LV Y+ A+ + + N ++ +YA
Sbjct: 62 GVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAK 121
Query: 411 HGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKH 470
+ +E IA ++R+++ G RPD ++ S L AC + G + K SL
Sbjct: 122 NELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYV 181
Query: 471 YTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
++ + R +G A ++ D+V W A++ S G
Sbjct: 182 CNALISMYKRFRNMGIARRLFDRM-FERDAVSWNAVINCYASEG 224
>gi|225439799|ref|XP_002273893.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37310-like [Vitis vinifera]
Length = 667
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 192/580 (33%), Positives = 300/580 (51%), Gaps = 71/580 (12%)
Query: 58 NLVSWSAVIGGFTQNG---YDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLS-LG 113
N+ SW+A++ G++ + + + L + L+P+ T++ VL A + L S L
Sbjct: 99 NIFSWNAMLIGYSIHNMHVHTLNLLSSLLPSYSLTLKPDNFTITCVLKALSVLFPDSILA 158
Query: 114 KEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCEN 173
KE ++ R+GF S+ FVVN L+ Y RC ++ I
Sbjct: 159 KEVQCFVLRHGFDSDIFVVNALITYYSRC----------DEYGI---------------- 192
Query: 174 GNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFT 233
AR LFD+M R I+SWNSMI+GY Y++ ++R +L G+ P T
Sbjct: 193 -----ARILFDRMH----DRDIVSWNSMIAGYSQGGFYEDCKELYRKMLDSTGLRPNGVT 243
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
SVL ACA N L G ++H I ++ D +L+ +Y + L A+ F+E+
Sbjct: 244 VVSVLQACAQTNDLVFGMKVHQFIIERKVEMDVSAHNSLIGLYAKCGSLDYARELFNEMS 303
Query: 294 NIE-----NLLGKMKEDGF------------EPNVYTWNA--------------MQLFSE 322
N + +++ GF P + TWNA ++L E
Sbjct: 304 NKDEVTYGSIVSGYMTHGFVDKAMDLFREMKNPRLSTWNAVISGLVQNNCNEGILELVQE 363
Query: 323 MLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGS 382
M P+ T+ IL S + ++ GK +HAYAIR GY ++++ T+++D YAK G
Sbjct: 364 MQEFGFRPNAVTLSSILPTFSCFSNLKGGKAIHAYAIRNGYAHNIYVATSIIDAYAKLGF 423
Query: 383 LKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSA 442
L+ A+ + + L+ A+++AY+ HG + F +L++G +PD ++F + L+A
Sbjct: 424 LRGAQWVFDQSKDRSLIVWTAIISAYSAHGDANAALRLFGDMLSNGTQPDPVTFTAVLAA 483
Query: 443 CVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSV 501
C H+G + + FD M Y +P ++HY CMV +LSRAG L EA EFI K+P+ P++
Sbjct: 484 CAHSGMVNEAWKIFDEMFLKYGFQPCVEHYACMVGVLSRAGMLSEAAEFICKMPIEPNAK 543
Query: 502 MWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMK 561
+WGALL G G++E G+ D L +EP NTGNYV++ANL++ AGRW + R+KMK
Sbjct: 544 VWGALLNGVSVSGDVELGKFVCDHLFNMEPENTGNYVIMANLYSQAGRWEEAENIREKMK 603
Query: 562 DRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
+ K PG SWIE + F A D S +RSEEIY +++
Sbjct: 604 KIGLKKIPGTSWIETSGGLRSFIARDVSSERSEEIYGMLE 643
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 102/387 (26%), Positives = 180/387 (46%), Gaps = 43/387 (11%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y +C A+ +F M +RD VSWNS
Sbjct: 184 YSRCDEYGIARILFDRMHDRDIVSWNS--------------------------------- 210
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRM-QAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+I G++Q G+ E+ + +M + GL PN T+ SVL ACA+ L G + H +I
Sbjct: 211 ---MIAGYSQGGFYEDCKELYRKMLDSTGLRPNGVTVVSVLQACAQTNDLVFGMKVHQFI 267
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ N L+ +Y +CG + A ++F++ S K+EV+ +I+ GY +G V +A
Sbjct: 268 IERKVEMDVSAHNSLIGLYAKCGSLDYARELFNEMSNKDEVTYGSIVSGYMTHGFVDKAM 327
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+LF +M++ + +WN++ISG V N+ + + ++ + G P + T S+L
Sbjct: 328 DLFREMKNPRLS----TWNAVISGLVQNNCNEGILELVQE-MQEFGFRPNAVTLSSILPT 382
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
+ ++L+ GK IHA AI G + +V ++++ Y + L AQ FD+ ++ ++
Sbjct: 383 FSCFSNLKGGKAIHAYAIRNGYAHNIYVATSIIDAYAKLGFLRGAQWVFDQSKDRSLIVW 442
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACS-SLATMERGKQVHAYAI 359
+ + A++LF +MLS PD T +L+AC+ S E K +
Sbjct: 443 TAIISAYSAHGDANAALRLFGDMLSNGTQPDPVTFTAVLAACAHSGMVNEAWKIFDEMFL 502
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHA 386
+ G+ V +V + ++ G L A
Sbjct: 503 KYGFQPCVEHYACMVGVLSRAGMLSEA 529
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 146/296 (49%), Gaps = 8/296 (2%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KCGSLD A+++F M +D V++ S+V+ +G V +A++ M + P L
Sbjct: 285 LYAKCGSLDYARELFNEMSNKDEVTYGSIVSGYMTHGFVDKAMDLFREM-----KNPRLS 339
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+AVI G QN +E + ++ MQ G PNA TLSS+LP + L GK H Y
Sbjct: 340 TWNAVISGLVQNNCNEGILELVQEMQEFGFRPNAVTLSSILPTFSCFSNLKGGKAIHAYA 399
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
RNG+ N +V ++D Y + G + A +F + ++ + II Y +G+ A
Sbjct: 400 IRNGYAHNIYVATSIIDAYAKLGFLRGAQWVFDQSKDRSLIVWTAIISAYSAHGDANAAL 459
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LF M G Q +++ ++++ + + +EA+ +F ++ ++ G +P + ++
Sbjct: 460 RLFGDMLSNGTQPDPVTFTAVLAACAHSGMVNEAWKIFDEMFLKYGFQPCVEHYACMVGV 519
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
+ L + E + ++ + V GAL+ D+ + D + N+E
Sbjct: 520 LSRAGMLSEAAE---FICKMPIEPNAKVWGALLNGVSVSGDVELGKFVCDHLFNME 572
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 142/300 (47%), Gaps = 34/300 (11%)
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
FG ++ C+D LR+ K++HA + L D F+ L+ Y + L A FD+I
Sbjct: 37 FGRLIQHCSDHRLLRQAKQLHARIVLSSLTPDNFLASKLITFYSKSNHLYEAHKVFDKI- 95
Query: 294 NIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDL-----------------TPDIYTVG 336
+ N+++WNAM + + ++ + PD +T+
Sbjct: 96 -------------LDKNIFSWNAMLIGYSIHNMHVHTLNLLSSLLPSYSLTLKPDNFTIT 142
Query: 337 IILSACSSLATME-RGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST 395
+L A S L K+V + +R G+DSD+ + AL+ Y++C AR+ + R+
Sbjct: 143 CVLKALSVLFPDSILAKEVQCFVLRHGFDSDIFVVNALITYYSRCDEYGIARILFDRMHD 202
Query: 396 PDLVSQNAMLTAYAMHGHGKEGIAHFRRIL-ASGFRPDHISFLSALSACVHAGSIKTGSE 454
D+VS N+M+ Y+ G ++ +R++L ++G RP+ ++ +S L AC + G +
Sbjct: 203 RDIVSWNSMIAGYSQGGFYEDCKELYRKMLDSTGLRPNGVTVVSVLQACAQTNDLVFGMK 262
Query: 455 FFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
+ V+ + + ++ L ++ G L A E ++ D V +G+++ G ++HG
Sbjct: 263 VHQFIIERKVEMDVSAHNSLIGLYAKCGSLDYARELFNEMS-NKDEVTYGSIVSGYMTHG 321
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 141/289 (48%), Gaps = 11/289 (3%)
Query: 141 RCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNS 200
R L A + S + N ++ + +I Y ++ ++ EA ++FD++ + + I SWN+
Sbjct: 51 RQAKQLHARIVLSSLTPDNFLA-SKLITFYSKSNHLYEAHKVFDKI----LDKNIFSWNA 105
Query: 201 MISGYVDNSL--YDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADM--NSLRKGKEIHAL 256
M+ GY +++ + ++P +FT VL A + + +S+ KE+
Sbjct: 106 MLIGYSIHNMHVHTLNLLSSLLPSYSLTLKPDNFTITCVLKALSVLFPDSIL-AKEVQCF 164
Query: 257 AIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNA 316
+ G SD FV AL+ Y R + A++ FD + + + + G+ + +
Sbjct: 165 VLRHGFDSDIFVVNALITYYSRCDEYGIARILFDRMHDRDIVSWNSMIAGYSQGGFYEDC 224
Query: 317 MQLFSEML-SLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVD 375
+L+ +ML S L P+ TV +L AC+ + G +VH + I + DV +L+
Sbjct: 225 KELYRKMLDSTGLRPNGVTVVSVLQACAQTNDLVFGMKVHQFIIERKVEMDVSAHNSLIG 284
Query: 376 MYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRI 424
+YAKCGSL +AR + +S D V+ ++++ Y HG + + FR +
Sbjct: 285 LYAKCGSLDYARELFNEMSNKDEVTYGSIVSGYMTHGFVDKAMDLFREM 333
Score = 45.4 bits (106), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 74/185 (40%), Gaps = 9/185 (4%)
Query: 331 DIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAY 390
D G ++ CS + + KQ+HA + D + + L+ Y+K L A +
Sbjct: 33 DYGAFGRLIQHCSDHRLLRQAKQLHARIVLSSLTPDNFLASKLITFYSKSNHLYEAHKVF 92
Query: 391 KRISTPDLVSQNAMLTAYA---MHGHGKEGIAHFRRILASGFRPDHISF---LSALSACV 444
+I ++ S NAML Y+ MH H ++ + +PD+ + L ALS
Sbjct: 93 DKILDKNIFSWNAMLIGYSIHNMHVHTLNLLSSLLPSYSLTLKPDNFTITCVLKALSVLF 152
Query: 445 HAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWG 504
+ + F L +D + ++ SR E G A ++ D V W
Sbjct: 153 PDSILAKEVQCFVLRHGFD--SDIFVVNALITYYSRCDEYGIARILFDRM-HDRDIVSWN 209
Query: 505 ALLGG 509
+++ G
Sbjct: 210 SMIAG 214
>gi|449482345|ref|XP_004156253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 614
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 176/527 (33%), Positives = 280/527 (53%), Gaps = 37/527 (7%)
Query: 77 EAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLV 136
+A+ + +M G PNA T L +CA L LG +FHG IT+ G + PFV GL+
Sbjct: 23 QALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQITKVGCVFEPFVQTGLI 82
Query: 137 DVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGII 196
+Y C+ V AR++F++ H ++ +
Sbjct: 83 SMY-------------------------------CKGSLVDNARKVFEENFH--SRKLTV 109
Query: 197 SWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHAL 256
+N+++SGYV NS +A +FR + +G+ S T ++ AC +L G +H
Sbjct: 110 CYNALVSGYVSNSKCSDAVLLFRQM-NEEGVPVNSVTLLGLIPACVSPINLELGSSLHCS 168
Query: 257 AIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG-KMKEDGFEPNVYTWN 315
+ G SD V + MY + + AQ FDE+ ++ L+ G+ N N
Sbjct: 169 TLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEMP-VKGLISWNAMVSGYAQNGLATN 227
Query: 316 AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVD 375
++L+ M + PD T+ +LS+C++L G +V G+ S+ + AL++
Sbjct: 228 VLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNALIN 287
Query: 376 MYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHIS 435
MYA+CG+L A+ + + LVS A++ Y MHGHG+ + F+ ++ SG PD +
Sbjct: 288 MYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTA 347
Query: 436 FLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKI 494
F+ LSAC HAG G E+F +M Y ++P +HY+CMVDLL RAG L EA I+ +
Sbjct: 348 FVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESM 407
Query: 495 PMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLA 554
P+ PD +WGALLG C H N+E ++A +R+IELEP N G YV+L+N+++ A +
Sbjct: 408 PIKPDGAVWGALLGACKIHKNVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVL 467
Query: 555 RTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
R R MK++++ K PGCS++E + +H F DR+H +S+EIY +++
Sbjct: 468 RIRIMMKEKKLKKDPGCSYVELKGRVHPFIVGDRNHLQSDEIYRVLE 514
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/382 (26%), Positives = 179/382 (46%), Gaps = 18/382 (4%)
Query: 198 WNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALA 257
WN+ + + +A S++ +L R G P +FTF L +CA ++ G + H
Sbjct: 8 WNTQLRELAKRCQFLQALSLYPQML-RHGDRPNAFTFPFALKSCAALSLPILGSQFHGQI 66
Query: 258 IALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKE--DGFEPNVYTWN 315
+G + FV L+ MYC+ + A+ F+E + L G+ N +
Sbjct: 67 TKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSD 126
Query: 316 AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVD 375
A+ LF +M + + T+ ++ AC S +E G +H ++ G+DSDV + +
Sbjct: 127 AVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFIT 186
Query: 376 MYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHIS 435
MY KCGS+ +A+ + + L+S NAM++ YA +G + +R + +G PD ++
Sbjct: 187 MYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVT 246
Query: 436 FLSALSACVHAGSIKTGSEF-FDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKK 493
+ LS+C + G+ G E F + A + P L + ++++ +R G L +A
Sbjct: 247 LVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNN--ALINMYARCGNLTKAQAVFDG 304
Query: 494 IPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIEL-----EPNNTGNYVMLANLFAYAG 548
+P V W A++GG HG+ G+IA E+ EP+ T +V + + ++AG
Sbjct: 305 MP-ERTLVSWTAIIGGYGMHGH---GEIAVQLFKEMIRSGIEPDGTA-FVCVLSACSHAG 359
Query: 549 RWSDLARTRQKMKDRRMHKSPG 570
+D KM R PG
Sbjct: 360 -LTDQGLEYFKMMKRNYQLEPG 380
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/387 (25%), Positives = 167/387 (43%), Gaps = 46/387 (11%)
Query: 60 VSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
V ++A++ G+ N +A+ + +M EG+ N+ TL ++PAC L LG H
Sbjct: 109 VCYNALVSGYVSNSKCSDAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCS 168
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ GF S+ VVN + +Y +CG + A K+F + +K +S N ++ GY +NG
Sbjct: 169 TLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNV 228
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
EL+ M+ +G+ P T VL
Sbjct: 229 LELYRNMD------------------------------------MNGVHPDPVTLVGVLS 252
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
+CA++ + G E+ A G S+ F+ AL+ MY R +L AQ FD + +
Sbjct: 253 SCANLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVS 312
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
G+ + + A+QLF EM+ + PD +LSACS ++G +
Sbjct: 313 WTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMK 372
Query: 360 RCGYDSDVHIG----TALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNAMLTAYAMHGHG 414
R + + G + +VD+ + G LK A+ + + PD A+L A +H +
Sbjct: 373 R---NYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHKNV 429
Query: 415 KEGIAHFRRILASGFRPDHISFLSALS 441
+ F R++ P++I + LS
Sbjct: 430 ELAELAFERVIE--LEPENIGYYVLLS 454
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 134/296 (45%), Gaps = 39/296 (13%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGS++ A+K+F MP + L+
Sbjct: 187 MYMKCGSVNYAQKLFDEMPVK------------------------------------GLI 210
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A++ G+ QNG + + M G+ P+ TL VL +CA L S+G E +
Sbjct: 211 SWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKM 270
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+GF SNPF+ N L+++Y RCG++ A +F + VS II GY +G+ A
Sbjct: 271 QASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAV 330
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+LF +M G++ ++ ++S L D+ F+ + +EP + ++
Sbjct: 331 QLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDL 390
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
L KE L ++ ++ D V GAL+ ++++ A++AF+ + +E
Sbjct: 391 LGRAGRL---KEAQTLIESMPIKPDGAVWGALLGACKIHKNVELAELAFERVIELE 443
>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 1083
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 197/600 (32%), Positives = 313/600 (52%), Gaps = 48/600 (8%)
Query: 5 CGSLDDAKKV----FKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
C SL D KKV FKM E D S+V + G++ A + +D ++
Sbjct: 134 CVSLVDGKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVF-----VDMPVKDVG 188
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A+I GF QNG A+G+L RM+ EG++ + T++S+LP CA+ + G H ++
Sbjct: 189 SWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHV 248
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
++G S+ FV N L+++Y SKF G + +A+
Sbjct: 249 LKHGLDSDVFVSNALINMY-------------SKF------------------GRLQDAQ 277
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+FDQME R ++SWNS+I+ Y N+ A F+ + + GI P T S+
Sbjct: 278 MVFDQME----VRDLVSWNSIIAAYEQNNDPSTALRFFKGMQL-GGIRPDLLTVVSLTSI 332
Query: 241 CADMNSLRKGKEIHALAIALG-LQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
+ ++ R + I I L D +G ALV MY + + A FD++ + +
Sbjct: 333 FSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTIS 392
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSL-DLTPDIYTVGIILSACSSLATMERGKQVHAYA 358
G+ N A+ ++ M D P+ T I+ A S + +++G ++HA
Sbjct: 393 WNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKL 452
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGI 418
I+ DV + T L+D+Y KCG L+ A + I V NA++ + +HG G+E +
Sbjct: 453 IKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEAL 512
Query: 419 AHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDL 477
F+ +LA + DHI+F+S LSAC H+G + G + FD+M Y +KPSLKHY CMVDL
Sbjct: 513 QLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDL 572
Query: 478 LSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNY 537
L RAG L +AYE ++ +P+ PD+ +WGALL C +GN E G +A+DRL+E++ N G Y
Sbjct: 573 LGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLLEVDSENVGYY 632
Query: 538 VMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
V+L+N++A +W + + R +DR + K+PG S + + F +++H + EIY
Sbjct: 633 VLLSNIYANTEKWEGVIKVRSLARDRGLRKTPGWSSVVVGSKAEVFYTGNQTHPKYTEIY 692
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/361 (26%), Positives = 166/361 (45%), Gaps = 12/361 (3%)
Query: 158 KNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSM 217
+N V +I Y +G+++ +R FD + ++ I SWNS+IS YV Y EA +
Sbjct: 52 QNIVLSTKLINLYVTHGDISLSRSTFDYIH----KKNIFSWNSIISAYVRFGKYHEAMNC 107
Query: 218 FRDLLMRDG---IEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVE 274
L G + P +TF +L AC SL GK++H +G + D FV +LV
Sbjct: 108 VNQLFSMCGGGHLRPDFYTFPPILKACV---SLVDGKKVHCCVFKMGFEDDVFVAASLVH 164
Query: 275 MYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYT 334
+Y RY L A F ++ + GF N A+ + + M + D T
Sbjct: 165 LYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTIT 224
Query: 335 VGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS 394
V IL C+ + G +H + ++ G DSDV + AL++MY+K G L+ A++ + ++
Sbjct: 225 VASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQME 284
Query: 395 TPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSE 454
DLVS N+++ AY + + F+ + G RPD ++ +S S +
Sbjct: 285 VRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRS 344
Query: 455 FFDLMAYYD-VKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSH 513
+ + + + +V++ ++ G + A+ ++P D++ W L+ G +
Sbjct: 345 ILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRK-DTISWNTLVTGYTQN 403
Query: 514 G 514
G
Sbjct: 404 G 404
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 109/432 (25%), Positives = 178/432 (41%), Gaps = 82/432 (18%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G L DA+ VF M RD VSWNS++ A
Sbjct: 266 MYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAA---------------------------- 297
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+ QN A+ MQ G+ P+ T+ S+ ++L + + G++
Sbjct: 298 --------YEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFV 349
Query: 121 TRNGFMSNPFVV-NGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
R ++ V+ N LV++Y + G M A +F + K+ +S NT++ GY +NG +EA
Sbjct: 350 IRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEA 409
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
+ ++ ME RD I P T+ S++
Sbjct: 410 IDAYNMMEEC----------------------------------RDTI-PNQGTWVSIIP 434
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
A + + +L++G +IHA I L D FV L+++Y + L A F EI ++
Sbjct: 435 AYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVP 494
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV----- 354
+ A+QLF +ML+ + D T +LSACS ++ G++
Sbjct: 495 WNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQ 554
Query: 355 HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHA-RLAYKRISTPDLVSQNAMLTAYAMHGH 413
Y I+ S H G +VD+ + G L+ A L PD A+L+A ++G+
Sbjct: 555 KEYGIK---PSLKHYG-CMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGN 610
Query: 414 GKEGIAHFRRIL 425
+ G R+L
Sbjct: 611 AELGTLASDRLL 622
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 123/297 (41%), Gaps = 38/297 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G ++ A VF +P +D +SWN++VT NGL EA++ M + PN
Sbjct: 368 MYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQG 427
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W S++PA + + L G + H +
Sbjct: 428 TW-----------------------------------VSIIPAYSHVGALQQGMKIHAKL 452
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+N + FV L+D+Y +CG + A+ +F + V N II +G EA
Sbjct: 453 IKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEAL 512
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+LF M V+ I++ S++S + L DE F + GI+P+ +G ++
Sbjct: 513 QLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDL 572
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
L K E L + +Q D + GAL+ Y + +A D + +++
Sbjct: 573 LGRAGYLEKAYE---LVRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLLEVDS 626
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 128/294 (43%), Gaps = 39/294 (13%)
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
F ++ +C ++N+ +K +HAL + G + + L+ +Y + D+ ++ FD I
Sbjct: 25 FNALFNSCVNVNATKK---LHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIH 81
Query: 294 NIENLLGKMKEDGFEPNVYTWNAM------------------QLFSEMLSLDLTPDIYTV 335
+ N+++WN++ QLFS L PD YT
Sbjct: 82 --------------KKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTF 127
Query: 336 GIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST 395
IL AC SL GK+VH + G++ DV + +LV +Y++ G L A + +
Sbjct: 128 PPILKACVSLVD---GKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPV 184
Query: 396 PDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEF 455
D+ S NAM++ + +G+ + R+ G + D I+ S L C + + G
Sbjct: 185 KDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLI 244
Query: 456 FDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
+ + + + ++++ S+ G L +A ++ + D V W +++
Sbjct: 245 HLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVR-DLVSWNSIIAA 297
>gi|449440387|ref|XP_004137966.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Cucumis sativus]
Length = 792
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 187/620 (30%), Positives = 313/620 (50%), Gaps = 77/620 (12%)
Query: 5 CGSLDDAK-------KVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETP 57
C LDD K V K D ++ N++++ + +A+ R+ D
Sbjct: 209 CSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKD---- 264
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGL-EPNARTLSSVLPACARLQKLSLGKEF 116
L+SW ++I GF+Q GY+ EA+ M ++ + +PN S AC++L + G++
Sbjct: 265 -LISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQI 323
Query: 117 HGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNV 176
HG + G S+ F L D+Y +CG + SA
Sbjct: 324 HGLCIKFGLGSDLFAGCSLCDMYAKCGFLESA---------------------------- 355
Query: 177 AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGS 236
R +F +E + +++WN++I+G+ S E+ S F + G+ P T S
Sbjct: 356 ---RTVFYHIE----KPDLVAWNAIIAGFASVSNAKESSSFFSQM-RHTGLVPNDVTVLS 407
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
+L AC++ L G ++H+ + +G D V +L+ MY + +L A F++I N
Sbjct: 408 LLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFEDIGN-- 465
Query: 297 NLLGKMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSAC 342
+ ++ +WN + +L M + + PD T+ +L +
Sbjct: 466 -----------KADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSS 514
Query: 343 SSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQN 402
+A+ E G Q+H + ++ G + D+ + AL++MY KCGSL+ AR + I PD++S +
Sbjct: 515 GQIASYEVGSQIHCFIMKSGLNLDISVSNALINMYTKCGSLECARKMFDSIGNPDIISWS 574
Query: 403 AMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY- 461
+++ YA G GKE FR + G +P+ I+F+ L+AC H G ++ G + + M
Sbjct: 575 SLIVGYAQAGCGKEAFELFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYRTMQED 634
Query: 462 YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQI 521
Y + P+ +H +CMVDLL+RAG L A +FIK++P PD V+W LL C HGNLE G+
Sbjct: 635 YRISPTKEHCSCMVDLLARAGCLDVAEDFIKQMPFVPDVVVWKTLLAACKVHGNLEVGKR 694
Query: 522 AADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIH 581
AA+ +++++P+N+ VML N+ A +G W D AR R M+ + K PG SWIE +D++H
Sbjct: 695 AAENVLKIDPSNSAAVVMLCNIHASSGHWKDFARLRSSMRRMDVGKVPGQSWIEIKDKVH 754
Query: 582 KFRASDRSHDRSEEIYTIID 601
F A D H +IYT+++
Sbjct: 755 VFLAEDNLHPERGKIYTMLE 774
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 133/524 (25%), Positives = 233/524 (44%), Gaps = 101/524 (19%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKCGSL +A+ +F MP + N+V
Sbjct: 142 MYGKCGSLKEARNMFDSMPLK------------------------------------NVV 165
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+++I G+++ G ++ AI + +M G P+ T S++ +C+ L L ++ H ++
Sbjct: 166 SWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDFKLARQLHAHV 225
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
++ F ++ N L+ +Y + M A+ +FS+ IK+ +S ++I G+ + G
Sbjct: 226 LKSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGFSQLG-----Y 280
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
EL EA FR++L + +P F FGS A
Sbjct: 281 EL------------------------------EALCHFREMLSQSVYQPNEFVFGSAFSA 310
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C+ + G++IH L I GL SD F G +L +MY + L +A+ F IE
Sbjct: 311 CSKLLEPDCGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIE------- 363
Query: 301 KMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSSLA 346
+P++ WNA+ FS+M L P+ TV +L ACS
Sbjct: 364 -------KPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPV 416
Query: 347 TMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRI-STPDLVSQNAML 405
+ G QVH+Y ++ G++ D+ + +L+ MY+KC +L A ++ I + D+VS N +L
Sbjct: 417 MLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLL 476
Query: 406 TAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVK 465
TA E + + + AS +PDH++ + L + S + GS+ + +
Sbjct: 477 TACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKSGLN 536
Query: 466 PSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
+ ++++ ++ G L A + I PD + W +L+ G
Sbjct: 537 LDISVSNALINMYTKCGSLECARKMFDSIG-NPDIISWSSLIVG 579
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 117/457 (25%), Positives = 204/457 (44%), Gaps = 43/457 (9%)
Query: 96 TLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKF 155
T + ++ AC+ L+ L G++ H ++ + + + N ++ +Y +CG + A +F
Sbjct: 100 TYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHILSMYGKCGSLKEARNMFDSM 159
Query: 156 SIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAF 215
+KN VS ++I GY G A L+ QM
Sbjct: 160 PLKNVVSWTSMISGYSRYGEEDNAITLYVQM----------------------------- 190
Query: 216 SMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEM 275
+R G P FTFGS++ +C+ ++ + +++HA + +D AL+ M
Sbjct: 191 -------LRSGHIPDHFTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISM 243
Query: 276 YCRYQDLVAAQMAFDEIENIENLL--GKMKEDGFEPNVYTWNAMQLFSEMLSLDL-TPDI 332
Y ++ + A F I I++L+ G M GF Y A+ F EMLS + P+
Sbjct: 244 YTKFSQMADAINVFSRII-IKDLISWGSMIA-GFSQLGYELEALCHFREMLSQSVYQPNE 301
Query: 333 YTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKR 392
+ G SACS L + G+Q+H I+ G SD+ G +L DMYAKCG L+ AR +
Sbjct: 302 FVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYH 361
Query: 393 ISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTG 452
I PDLV+ NA++ +A + KE + F ++ +G P+ ++ LS L AC + G
Sbjct: 362 IEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHG 421
Query: 453 SEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVS 512
+ + + ++ + S+ L +A + + I D V W LL C+
Sbjct: 422 IQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQ 481
Query: 513 HGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGR 549
+ G++ + ++V L N+ +G+
Sbjct: 482 QN--QAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQ 516
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 155/334 (46%), Gaps = 14/334 (4%)
Query: 209 SLYDEAFSMFRDLLMRDGIEP-TSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTF 267
+L+ EA F D+ + P S T+ ++ AC+ + SL G++IH + Q D
Sbjct: 76 NLHREALKAF-DIFQKCSSSPLKSVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMI 134
Query: 268 VGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKE-DGFEPNVYTWNAMQLFSEMLSL 326
+ ++ MY + L A+ FD + ++N++ G+ NA+ L+ +ML
Sbjct: 135 LQNHILSMYGKCGSLKEARNMFDSMP-LKNVVSWTSMISGYSRYGEEDNAITLYVQMLRS 193
Query: 327 DLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHA 386
PD +T G I+ +CS L + +Q+HA+ ++ + +D+ AL+ MY K + A
Sbjct: 194 GHIPDHFTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADA 253
Query: 387 RLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILA-SGFRPDHISFLSALSACVH 445
+ RI DL+S +M+ ++ G+ E + HFR +L+ S ++P+ F SA SAC
Sbjct: 254 INVFSRIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSK 313
Query: 446 AGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGA 505
G + L + + L + D+ ++ G L A I PD V W A
Sbjct: 314 LLEPDCGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIE-KPDLVAWNA 372
Query: 506 LLGGCVSHGNLE-----FGQIAADRLIELEPNNT 534
++ G S N + F Q+ R L PN+
Sbjct: 373 IIAGFASVSNAKESSSFFSQM---RHTGLVPNDV 403
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 110/231 (47%), Gaps = 37/231 (16%)
Query: 1 MYGKCGSLDDAKKVFKMMPER-DCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNL 59
MY KC +L+DA +VF+ + + D VSWN+++TAC E L R++ L
Sbjct: 446 MYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVL----RLTKL------- 494
Query: 60 VSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
M A ++P+ TL++VL + ++ +G + H +
Sbjct: 495 -------------------------MFASRIKPDHVTLTNVLVSSGQIASYEVGSQIHCF 529
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
I ++G + V N L+++Y +CG + A K+F + +S +++IVGY + G EA
Sbjct: 530 IMKSGLNLDISVSNALINMYTKCGSLECARKMFDSIGNPDIISWSSLIVGYAQAGCGKEA 589
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPT 230
ELF M LGV+ I++ +++ + +E ++R + I PT
Sbjct: 590 FELFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEDYRISPT 640
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 58/117 (49%), Gaps = 2/117 (1%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGSL+ A+K+F + D +SW+S++ A G EA E M L + PN +
Sbjct: 548 MYTKCGSLECARKMFDSIGNPDIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVK-PNEI 606
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEF 116
++ ++ + G EE + + MQ + + P S ++ AR L + ++F
Sbjct: 607 TFVGILTACSHIGMVEEGLKLYRTMQEDYRISPTKEHCSCMVDLLARAGCLDVAEDF 663
>gi|359483391|ref|XP_003632946.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Vitis vinifera]
Length = 732
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 189/601 (31%), Positives = 295/601 (49%), Gaps = 73/601 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KCG ++DA+ +F++M RD ++
Sbjct: 190 VYCKCGRVEDAQALFELMDARD------------------------------------VI 213
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW++++ G+ Q G E + +L RM+ +G+EP+ +T S++ A A KL +GK HG+I
Sbjct: 214 SWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHGHI 273
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R G + + L+ +Y +CG NV A
Sbjct: 274 LRAGLEQDSHIETSLIGMYLKCG-------------------------------NVNSAF 302
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+F+ M H + +ISW +MISG V N D A ++FR +L + + P++ T SVL A
Sbjct: 303 RIFEGMMH----KDVISWTAMISGLVQNDCADMAVTVFRRML-KSRVMPSTATIASVLAA 357
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA++ S G +H + ++ D +LV MY + L + FD + + +
Sbjct: 358 CAELGSFPLGTSVHGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSW 417
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G N + A+ LF+EM PD TV +L AC+S+ + +GK +H + +
Sbjct: 418 NAIVSGHAQNGHLCKALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWIHNFVTK 477
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
+ I TALVDMY+KCG L A+ + R+ DLVS ++++ Y HG G+ +
Sbjct: 478 SCLGPCILIDTALVDMYSKCGDLGSAQKCFDRMPQQDLVSWSSIIAGYGSHGKGETALRM 537
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLS 479
+ L +G +P+H+ +LS LSAC H G + G FF M + ++P L+H C+VDLLS
Sbjct: 538 YSDFLHTGIQPNHVIYLSILSACSHNGLVDQGLSFFHSMTKDFGIEPRLEHRACIVDLLS 597
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
RAG + EAY F K++ P + G LL C + GN+E G I A ++ L+P N GNYV
Sbjct: 598 RAGRVEEAYSFYKRMFPKPSMDVLGILLDACRTTGNVELGDIVAREIVILKPANAGNYVQ 657
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTI 599
LA+ +A RW + +MK + K PG S+IE I F SH + EEI +
Sbjct: 658 LAHSYASMKRWDGVGEVWTQMKSLHLKKLPGWSFIELHGTITTFFTDHSSHPQFEEIMLV 717
Query: 600 I 600
+
Sbjct: 718 L 718
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 114/460 (24%), Positives = 207/460 (45%), Gaps = 40/460 (8%)
Query: 57 PNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEF 116
P S++A+I + G + + M + P+A T S++ AC L S G F
Sbjct: 11 PATKSYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSF 70
Query: 117 HGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNV 176
H + +G+ S+ ++ L++ Y SKF G+
Sbjct: 71 HQRVIVDGYSSDSYIATSLINFY-------------SKF------------------GHN 99
Query: 177 AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGS 236
AR++FD M+ R ++ W +MI Y +D AFSM+ +++ R GI+P+S T
Sbjct: 100 QSARKVFDTMD----DRNVVPWTTMIGCYTRAGEHDVAFSMY-NIMRRQGIQPSSVTMLG 154
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
+L ++ L+ +HA I G SD + +++ +YC+ + AQ F+ ++ +
Sbjct: 155 LLSGVLELVHLQC---LHACVIQYGFGSDVALANSMLNVYCKCGRVEDAQALFELMDARD 211
Query: 297 NLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHA 356
+ G+ +QL M + + PD T G ++SA + + + GK VH
Sbjct: 212 VISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHG 271
Query: 357 YAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKE 416
+ +R G + D HI T+L+ MY KCG++ A ++ + D++S AM++ +
Sbjct: 272 HILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQNDCADM 331
Query: 417 GIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVD 476
+ FRR+L S P + S L+AC GS G+ + +K + +V
Sbjct: 332 AVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGTSVHGYILRQRIKLDIPSQNSLVT 391
Query: 477 LLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNL 516
+ ++ G L ++ ++ D V W A++ G +G+L
Sbjct: 392 MYAKCGHLEQSCSVFDRMSRR-DIVSWNAIVSGHAQNGHL 430
>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
Length = 784
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 172/519 (33%), Positives = 275/519 (52%), Gaps = 39/519 (7%)
Query: 85 MQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGD 144
M +GLE + SVL C + G+ H ++ + + ++ L+ +Y +C
Sbjct: 1 MGIQGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKC-- 58
Query: 145 MLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISG 204
C + +AR + D+M +R ++SW +MISG
Sbjct: 59 -----------------RC------------LGDARRVLDEMP----ERNVVSWTAMISG 85
Query: 205 YVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQS 264
Y EA +F ++LM G P FTF +VL +C + + G++IH+L I +S
Sbjct: 86 YSQRGYASEALHLFVEMLM-SGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFES 144
Query: 265 DTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEML 324
FVG +L++MY + + A+ FD + + + G+ A+ LF +
Sbjct: 145 HIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQ 204
Query: 325 SLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLK 384
+ + T +L+A S LA ++ G+QVH++ +R V + +L+DMY+KCGSL
Sbjct: 205 REGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLT 264
Query: 385 HARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASG-FRPDHISFLSALSAC 443
++R + + ++S NAML Y+ HG G+E + F+ + +PD ++FL+ LS C
Sbjct: 265 YSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGC 324
Query: 444 VHAGSIKTGSE-FFDLMAYYD-VKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSV 501
H G G E F++++ D +P ++HY C+VDL RAG + EA+EFIKK+P P +
Sbjct: 325 SHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAA 384
Query: 502 MWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMK 561
+WG+LLG C H N+ G+ A RL+E+E N GNYV+L+NL+A AGRW D+ R+ MK
Sbjct: 385 IWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAGRWDDVRTVRELMK 444
Query: 562 DRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTII 600
++ + K PG SWIE +H F ASDRSH R EE++ +
Sbjct: 445 EKAVIKEPGRSWIELDQTLHTFHASDRSHPRKEEVFAKV 483
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 101/429 (23%), Positives = 182/429 (42%), Gaps = 76/429 (17%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KC L DA++V MPER N+V
Sbjct: 54 LYNKCRCLGDARRVLDEMPER------------------------------------NVV 77
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A+I G++Q GY EA+ + M G PN T ++VL +C LG++ H +
Sbjct: 78 SWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLV 137
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ F S+ FV + L+D+Y + G + A ++F ++ VSC II GY + G EA
Sbjct: 138 IKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEAL 197
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+LF +++ R+G+ T+ SVL A
Sbjct: 198 DLFRRLQ------------------------------------REGMRSNYVTYASVLTA 221
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
+ + +L G+++H+ + L + +L++MY + L ++ FD + +
Sbjct: 222 LSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISW 281
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLD-LTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
G+ + A++LF M + + PD T +LS CS +RG ++ +
Sbjct: 282 NAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMV 341
Query: 360 --RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNAMLTAYAMHGHGKE 416
+ G++ ++ +VD++ + G ++ A K++ P ++L A +H +
Sbjct: 342 NQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHI 401
Query: 417 GIAHFRRIL 425
G RR+L
Sbjct: 402 GEFVARRLL 410
>gi|195651407|gb|ACG45171.1| CRR4 [Zea mays]
Length = 601
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 170/504 (33%), Positives = 277/504 (54%), Gaps = 8/504 (1%)
Query: 100 VLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKN 159
VL +CA G + H + G + + FV LVD Y + G+M SA+ F + IK+
Sbjct: 84 VLKSCALSAASCQGTQTHCHALVRGMLGDVFVQTALVDFYAKNGNMDSAVMAFEEMPIKD 143
Query: 160 EVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFR 219
+ N +I+GY +G+V EAR LFD M ++ SWNSMI+ Y + EA ++F
Sbjct: 144 PIPMNCLIIGYSRSGDVEEARRLFDSMP----RKTSASWNSMIACYAHGGEFQEALTLF- 198
Query: 220 DLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRY 279
D ++R+G P + T +V CA L G+ A LQ + V AL+EMY +
Sbjct: 199 DQMLREGASPNAITITTVFSICAKTGDLETGRRAKAWVSEEDLQ-NVIVHTALMEMYVKC 257
Query: 280 QDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIIL 339
+ + A+ FD + + + G+ N +++LF M + + P+ T+ +L
Sbjct: 258 RAIDEARREFDRMPRRDVVAWSTMIAGYSHNGRPHESLELFERMKATNCKPNEVTLVGVL 317
Query: 340 SACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLV 399
SAC+ L + E G+Q+ +Y ++G+AL+DMY KCG + AR + R+ ++
Sbjct: 318 SACAQLGSDELGEQIGSYIESQTLPLTSYLGSALIDMYTKCGHVARARDVFHRMEQKVVI 377
Query: 400 SQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM 459
+ N+M+ A++G ++ IA + ++ G +P+ I+FL+ L+AC HAG + G FF M
Sbjct: 378 AWNSMIRGLALNGFAEDAIALYGEMVGDGVQPNEITFLALLTACTHAGLVDKGMAFFQEM 437
Query: 460 AY--YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
P ++H C+VDLL ++G L EAY+FI + + P++V+W LL C +H ++E
Sbjct: 438 KKNKQHASPQVEHCACIVDLLCKSGRLWEAYKFICDMEVEPNAVIWTTLLSACRAHADVE 497
Query: 518 FGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDR 577
++AA +L+ LEPN++ YV+L+N++A AG W D+ R M+ + + K SWIE
Sbjct: 498 LAKLAAGKLVVLEPNSSSIYVLLSNIYADAGLWGDVREIRDLMRSKNLQKLSAYSWIELD 557
Query: 578 DEIHKFRASDRSHDRSEEIYTIID 601
E+H+F D H RS EIY ++D
Sbjct: 558 GEVHRFLVQDTYHPRSAEIYNVVD 581
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 100/422 (23%), Positives = 180/422 (42%), Gaps = 61/422 (14%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y K G++D A F+ MP +D + N ++ + +G V EA + M + S
Sbjct: 123 YAKNGNMDSAVMAFEEMPIKDPIPMNCLIIGYSRSGDVEEARRLFDSMPRKTS-----AS 177
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W+++I + G +EA+ + +M EG PNA T+++V CA+ L G+ +++
Sbjct: 178 WNSMIACYAHGGEFQEALTLFDQMLREGASPNAITITTVFSICAKTGDLETGRRAKAWVS 237
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
+ N V L+++Y +C + A + F + ++ V+ +T+I GY NG E+ E
Sbjct: 238 EED-LQNVIVHTALMEMYVKCRAIDEARREFDRMPRRDVVAWSTMIAGYSHNGRPHESLE 296
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
LF++M+ + P T VL AC
Sbjct: 297 LFERMKATNCK------------------------------------PNEVTLVGVLSAC 320
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK 301
A + S G++I + + L +++G AL++MY + + A+ F +E +
Sbjct: 321 AQLGSDELGEQIGSYIESQTLPLTSYLGSALIDMYTKCGHVARARDVFHRMEQKVVIAWN 380
Query: 302 MKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG-------KQV 354
G N + +A+ L+ EM+ + P+ T +L+AC+ +++G K+
Sbjct: 381 SMIRGLALNGFAEDAIALYGEMVGDGVQPNEITFLALLTACTHAGLVDKGMAFFQEMKKN 440
Query: 355 HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS----TPDLVSQNAMLTAYAM 410
+A V +VD+ K G L AYK I P+ V +L+A
Sbjct: 441 KQHA-----SPQVEHCACIVDLLCKSGRLWE---AYKFICDMEVEPNAVIWTTLLSACRA 492
Query: 411 HG 412
H
Sbjct: 493 HA 494
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 101/221 (45%), Gaps = 36/221 (16%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC ++D+A++ F MP RD V+W++++ + NG E+LE ERM + N PN V
Sbjct: 253 MYVKCRAIDEARREFDRMPRRDVVAWSTMIAGYSHNGRPHESLELFERMKA-TNCKPNEV 311
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+ V+ Q G DE LG++ YI
Sbjct: 312 TLVGVLSACAQLGSDE-----------------------------------LGEQIGSYI 336
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
++ + L+D+Y +CG + A +F + K ++ N++I G NG +A
Sbjct: 337 ESQTLPLTSYLGSALIDMYTKCGHVARARDVFHRMEQKVVIAWNSMIRGLALNGFAEDAI 396
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDL 221
L+ +M GVQ I++ ++++ L D+ + F+++
Sbjct: 397 ALYGEMVGDGVQPNEITFLALLTACTHAGLVDKGMAFFQEM 437
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 93/211 (44%), Gaps = 33/211 (15%)
Query: 335 VGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS 394
+ ++L +C+ A +G Q H +A+ G DV + TALVD YAK G++ A +A++ +
Sbjct: 81 IPLVLKSCALSAASCQGTQTHCHALVRGMLGDVFVQTALVDFYAKNGNMDSAVMAFEEMP 140
Query: 395 TPDLV-------------------------------SQNAMLTAYAMHGHGKEGIAHFRR 423
D + S N+M+ YA G +E + F +
Sbjct: 141 IKDPIPMNCLIIGYSRSGDVEEARRLFDSMPRKTSASWNSMIACYAHGGEFQEALTLFDQ 200
Query: 424 ILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGE 483
+L G P+ I+ + S C G ++TG ++ D++ + H T ++++ +
Sbjct: 201 MLREGASPNAITITTVFSICAKTGDLETGRRAKAWVSEEDLQNVIVH-TALMEMYVKCRA 259
Query: 484 LGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
+ EA ++P D V W ++ G +G
Sbjct: 260 IDEARREFDRMPRR-DVVAWSTMIAGYSHNG 289
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 68/173 (39%), Gaps = 38/173 (21%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG + A+ VF M ++ ++WNS++ A NG
Sbjct: 354 MYTKCGHVARARDVFHRMEQKVVIAWNSMIRGLALNG----------------------- 390
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+ E+AI + M +G++PN T ++L AC + G F +
Sbjct: 391 -------------FAEDAIALYGEMVGDGVQPNEITFLALLTACTHAGLVDKGMAFFQEM 437
Query: 121 TRNGFMSNPFVVN--GLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYC 171
+N ++P V + +VD+ + G + A K ++ T ++ C
Sbjct: 438 KKNKQHASPQVEHCACIVDLLCKSGRLWEAYKFICDMEVEPNAVIWTTLLSAC 490
>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 173/546 (31%), Positives = 294/546 (53%), Gaps = 39/546 (7%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLE-PNARTLSSVLPACARLQKLSLGKEF 116
++++W++++ F + A+ M P+ T S+L CA L + +GK
Sbjct: 42 DVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVL 101
Query: 117 HGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNV 176
HG + + S+ ++ L+++Y CGD+ SA
Sbjct: 102 HGQVVKYMLHSDLYIETTLLNMYAACGDLKSA---------------------------- 133
Query: 177 AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGS 236
R LF++M H R + W SMISGY+ N +EA +++ + DG P T +
Sbjct: 134 ---RFLFERMGH----RNKVVWTSMISGYMKNHCPNEALLLYKKM-EEDGFSPDEVTMAT 185
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
++ ACA++ L G ++H+ + ++ +G ALV MY + DL A+ FD++ + +
Sbjct: 186 LVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDKLSDKD 245
Query: 297 NLLGKMKEDGFEPNVYTWNAMQLFSEMLS-LDLTPDIYTVGIILSACSSLATMERGKQVH 355
G+ N + A+QLF E+ ++ P+ T+ ++SAC+ L +E G+ VH
Sbjct: 246 VYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVH 305
Query: 356 AYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGK 415
Y R V + +L+DM++KCG + A+ + +S DL+S N+M+ +A+HG G+
Sbjct: 306 DYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGFALHGLGR 365
Query: 416 EGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSE-FFDLMAYYDVKPSLKHYTCM 474
E +A FR + + +PD I+F+ L+AC HAG ++ G + F+++ A Y V+ +HY CM
Sbjct: 366 EALAQFRLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCM 425
Query: 475 VDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNT 534
VDLL RAG L EA EFI+ +P+ PD +WG++LG C + NLE G+ AA L++LEP N
Sbjct: 426 VDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGACRVYNNLELGEEAARFLLKLEPTND 485
Query: 535 GNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSE 594
G Y++L+N++A W+++ + R+ M ++ + K+PGCS + + H F A D SH
Sbjct: 486 GVYILLSNIYAKRKMWNEVKKVRELMNEKGIQKTPGCSSVVIDNIAHSFLAGDCSHPEIA 545
Query: 595 EIYTII 600
EI ++
Sbjct: 546 EISIML 551
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 101/382 (26%), Positives = 185/382 (48%), Gaps = 12/382 (3%)
Query: 157 IKNEVSCNTIIVGYCENGN--VAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEA 214
I ++ S N +I G+ V A +F L V ++WNSM+ +V++++ A
Sbjct: 7 IHHKPSLNKLIAHVLSMGSLGVGYAYSVFAHTRELDV----LTWNSMLRAFVNSNMPRRA 62
Query: 215 FSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVE 274
+ ++L R P FTF S+L CA + + GK +H + L SD ++ L+
Sbjct: 63 LQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLN 122
Query: 275 MYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYT 334
MY DL +A+ F+ + + ++ G+ N A+ L+ +M +PD T
Sbjct: 123 MYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVT 182
Query: 335 VGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS 394
+ ++SAC+ L + G ++H++ +G+ALV+MYAKCG LK AR + ++S
Sbjct: 183 MATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDKLS 242
Query: 395 TPDLVSQNAMLTAYAMHGHGKEGIAHFRRIL-ASGFRPDHISFLSALSACVHAGSIKTGS 453
D+ + +A++ Y + E + FR + S RP+ ++ L+ +SAC G ++TG
Sbjct: 243 DKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGR 302
Query: 454 EFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSH 513
D + S+ ++D+ S+ G++ A + D + W +++ G H
Sbjct: 303 WVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSY-KDLISWNSMVNGFALH 361
Query: 514 GNLEFGQIAADRLIE---LEPN 532
G L +A RL++ L+P+
Sbjct: 362 G-LGREALAQFRLMQTTDLQPD 382
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 94/378 (24%), Positives = 167/378 (44%), Gaps = 45/378 (11%)
Query: 13 KVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQN 72
+V K M D +++ AA G + A ERM N V W+++I G+ +N
Sbjct: 104 QVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGH-----RNKVVWTSMISGYMKN 158
Query: 73 GYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVV 132
EA+ + +M+ +G P+ T+++++ ACA L+ L +G + H +I +
Sbjct: 159 HCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLG 218
Query: 133 NGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQ 192
+ LV++Y +CGD+ +A ++F K S K+ + + +I GY +N EA +L
Sbjct: 219 SALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQL---------- 268
Query: 193 RGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKE 252
FR++ + P T +V+ ACA + L G+
Sbjct: 269 -------------------------FREVAGGSNMRPNEVTILAVISACAQLGDLETGRW 303
Query: 253 IHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVY 312
+H + +L++M+ + D+ AA+ FD + + + +GF +
Sbjct: 304 VHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGFALHGL 363
Query: 313 TWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDV---HI 369
A+ F M + DL PD T +L+ACS ++ GK++ Y I Y + H
Sbjct: 364 GREALAQFRLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLF-YEIEALYGVRLKSEHY 422
Query: 370 GTALVDMYAKCGSLKHAR 387
G +VD+ + G L AR
Sbjct: 423 G-CMVDLLCRAGLLAEAR 439
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 145/342 (42%), Gaps = 82/342 (23%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG L A++VF + ++D +
Sbjct: 224 MYAKCGDLKTARQVFDKLSDKD------------------------------------VY 247
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEG--LEPNARTLSSVLPACARLQKLSLGKEFHG 118
+WSA+I G+ +N EA+ LFR A G + PN T+ +V+ ACA+L L G+ H
Sbjct: 248 AWSALIFGYVKNNRSTEAL-QLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHD 306
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
YITR + + N L+D++ +CGD+ +A +IF S K+ +S N+++ G+ +G E
Sbjct: 307 YITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGFALHGLGRE 366
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFR------------------- 219
A F M+ +Q I++ +++ L E +F
Sbjct: 367 ALAQFRLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMV 426
Query: 220 DLLMRDG-------------IEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDT 266
DLL R G ++P +GS+L AC N+L G+E + L +D
Sbjct: 427 DLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGACRVYNNLELGEEAARFLLKLEPTNDG 486
Query: 267 FVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFE 308
+Y ++ A + ++E++ + L M E G +
Sbjct: 487 --------VYILLSNIYAKRKMWNEVKKVREL---MNEKGIQ 517
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 113/272 (41%), Gaps = 57/272 (20%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
M+ KCG +D AK++F M +D +SWNS+V A +GL EAL M + D + P+ +
Sbjct: 326 MFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTDLQ-PDEI 384
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQA--------------------EGLEPNARTLSSV 100
++ V+ + G +E + + ++A GL AR V
Sbjct: 385 TFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRV 444
Query: 101 LP-------------ACARLQKLSLGKEFHGYI-----TRNG---FMSNPFVVNGLVDVY 139
+P AC L LG+E ++ T +G +SN + + +
Sbjct: 445 MPLQPDGAIWGSMLGACRVYNNLELGEEAARFLLKLEPTNDGVYILLSNIYAKRKMWNEV 504
Query: 140 RRCGDMLSALKIFSKFSIKNEVSCNTIIV---------GYCENGNVAEARELFDQMEHLG 190
++ +++ ++ I+ C+++++ G C + +AE + Q+
Sbjct: 505 KKVRELM------NEKGIQKTPGCSSVVIDNIAHSFLAGDCSHPEIAEISIMLRQVREKL 558
Query: 191 VQRGIISWNSMISGYVDNSLYDEAFSMFRDLL 222
G ++ S + +D++ +E+ S + L
Sbjct: 559 KLAGYVADTSEVLLNIDDNKKEESVSQHSEKL 590
>gi|302144099|emb|CBI23204.3| unnamed protein product [Vitis vinifera]
Length = 907
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 189/597 (31%), Positives = 295/597 (49%), Gaps = 73/597 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KCG ++DA+ +F++M RD ++
Sbjct: 190 VYCKCGRVEDAQALFELMDARD------------------------------------VI 213
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW++++ G+ Q G E + +L RM+ +G+EP+ +T S++ A A KL +GK HG+I
Sbjct: 214 SWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHGHI 273
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R G + + L+ +Y +CG++ SA +I
Sbjct: 274 LRAGLEQDSHIETSLIGMYLKCGNVNSAFRI----------------------------- 304
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
F+ M H + +ISW +MISG V N D A ++FR +L + + P++ T SVL A
Sbjct: 305 --FEGMMH----KDVISWTAMISGLVQNDCADMAVTVFRRML-KSRVMPSTATIASVLAA 357
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA++ S G +H + ++ D +LV MY + L + FD + + +
Sbjct: 358 CAELGSFPLGTSVHGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSW 417
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G N + A+ LF+EM PD TV +L AC+S+ + +GK +H + +
Sbjct: 418 NAIVSGHAQNGHLCKALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWIHNFVTK 477
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
+ I TALVDMY+KCG L A+ + R+ DLVS ++++ Y HG G+ +
Sbjct: 478 SCLGPCILIDTALVDMYSKCGDLGSAQKCFDRMPQQDLVSWSSIIAGYGSHGKGETALRM 537
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLS 479
+ L +G +P+H+ +LS LSAC H G + G FF M + ++P L+H C+VDLLS
Sbjct: 538 YSDFLHTGIQPNHVIYLSILSACSHNGLVDQGLSFFHSMTKDFGIEPRLEHRACIVDLLS 597
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
RAG + EAY F K++ P + G LL C + GN+E G I A ++ L+P N GNYV
Sbjct: 598 RAGRVEEAYSFYKRMFPKPSMDVLGILLDACRTTGNVELGDIVAREIVILKPANAGNYVQ 657
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEI 596
LA+ +A RW + +MK + K PG S+IE I F SH + EEI
Sbjct: 658 LAHSYASMKRWDGVGEVWTQMKSLHLKKLPGWSFIELHGTITTFFTDHSSHPQFEEI 714
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 114/460 (24%), Positives = 207/460 (45%), Gaps = 40/460 (8%)
Query: 57 PNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEF 116
P S++A+I + G + + M + P+A T S++ AC L S G F
Sbjct: 11 PATKSYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSF 70
Query: 117 HGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNV 176
H + +G+ S+ ++ L++ Y SKF G+
Sbjct: 71 HQRVIVDGYSSDSYIATSLINFY-------------SKF------------------GHN 99
Query: 177 AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGS 236
AR++FD M+ R ++ W +MI Y +D AFSM+ +++ R GI+P+S T
Sbjct: 100 QSARKVFDTMD----DRNVVPWTTMIGCYTRAGEHDVAFSMY-NIMRRQGIQPSSVTMLG 154
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
+L ++ L+ +HA I G SD + +++ +YC+ + AQ F+ ++ +
Sbjct: 155 LLSGVLELVHLQC---LHACVIQYGFGSDVALANSMLNVYCKCGRVEDAQALFELMDARD 211
Query: 297 NLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHA 356
+ G+ +QL M + + PD T G ++SA + + + GK VH
Sbjct: 212 VISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHG 271
Query: 357 YAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKE 416
+ +R G + D HI T+L+ MY KCG++ A ++ + D++S AM++ +
Sbjct: 272 HILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQNDCADM 331
Query: 417 GIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVD 476
+ FRR+L S P + S L+AC GS G+ + +K + +V
Sbjct: 332 AVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGTSVHGYILRQRIKLDIPSQNSLVT 391
Query: 477 LLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNL 516
+ ++ G L ++ ++ D V W A++ G +G+L
Sbjct: 392 MYAKCGHLEQSCSVFDRMSRR-DIVSWNAIVSGHAQNGHL 430
>gi|224096616|ref|XP_002310672.1| predicted protein [Populus trichocarpa]
gi|222853575|gb|EEE91122.1| predicted protein [Populus trichocarpa]
Length = 551
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 182/575 (31%), Positives = 300/575 (52%), Gaps = 74/575 (12%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y K G A+KVF MPER +VS
Sbjct: 42 YSKLGDTVSARKVFDRMPER------------------------------------TVVS 65
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
WSA I G++QNG ++A+ + M G + N T SVL AC L+ L G + G +
Sbjct: 66 WSAQISGYSQNGCYQDALLVFLDMLRAGFKANQFTYGSVLRACTGLRCLQRGMQIQGCLE 125
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
++ F SN V + L+D++ +CG M +A
Sbjct: 126 KSRFASNLIVQSALLDLHSKCGKM-------------------------------EDASY 154
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
LF ME +R ++SWN++I Y ++F MFR + M++G+ P FTFGSVL A
Sbjct: 155 LFGMME----ERDVVSWNAIIGAYAVQGFSGDSFRMFRSM-MQEGMSPDLFTFGSVLKAS 209
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK 301
+ + + +IH L I LG S + G+L++ Y + + L +A + + + +
Sbjct: 210 GMASDVIRVCQIHQLIIQLGYGSHISLSGSLIDAYAKCESLASAHCLYKSMPMKDMISCT 269
Query: 302 MKEDGFEPNV-YTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G+ + Y+ A+ LF E+ + + D + + + C++++++ G+Q+HA A++
Sbjct: 270 ALMTGYARDSNYSSKALDLFKEIQQMHMKIDDVILCSMFNICANISSLSVGRQIHALALK 329
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
C DV +G AL+DMYAK G +K A A+ + +++S +++T Y HGHG E IA
Sbjct: 330 CKPTYDVAMGNALIDMYAKSGEIKDANRAFNEMEEKNVISWTSLITGYGSHGHGHEAIAL 389
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFD-LMAYYDVKPSLKHYTCMVDLLS 479
F+++ G +P+ I+FLS L AC H G G E F+ +++ Y++ P +H++CMVDL +
Sbjct: 390 FKKMEYEGLKPNDITFLSLLFACNHCGLTGEGWECFNNMISKYNILPRAEHFSCMVDLFA 449
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
R G L EAY I K+ + P++ +WGA+LG C +GN+ + AA L +++P N+ NYV+
Sbjct: 450 RGGLLEEAYNLINKMNIKPNASLWGAILGACYIYGNMPLAEEAAIHLFKMDPENSVNYVV 509
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWI 574
LA+++A AG W + + R+ M++R + K+PG S+I
Sbjct: 510 LADIYAAAGSWDNAWKMRKLMEERNLKKAPGYSFI 544
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 114/460 (24%), Positives = 197/460 (42%), Gaps = 67/460 (14%)
Query: 101 LPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNE 160
L C + G H I NGF SN + L+ Y + GD +SA K+F + +
Sbjct: 4 LQLCIETKAKKPGHLIHNQILTNGFASNIHLSTKLIIFYSKLGDTVSARKVFDRMPERTV 63
Query: 161 VSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRD 220
VS + I GY +NG Y +A +F D
Sbjct: 64 VSWSAQISGYSQNG-----------------------------------CYQDALLVFLD 88
Query: 221 LLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQ 280
+L R G + FT+GSVL AC + L++G +I S+ V AL++++ +
Sbjct: 89 ML-RAGFKANQFTYGSVLRACTGLRCLQRGMQIQGCLEKSRFASNLIVQSALLDLHSK-- 145
Query: 281 DLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAM--------------QLFSEMLSL 326
++E+ L G M+E +V +WNA+ ++F M+
Sbjct: 146 --------CGKMEDASYLFGMMEER----DVVSWNAIIGAYAVQGFSGDSFRMFRSMMQE 193
Query: 327 DLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHA 386
++PD++T G +L A + + R Q+H I+ GY S + + +L+D YAKC SL A
Sbjct: 194 GMSPDLFTFGSVLKASGMASDVIRVCQIHQLIIQLGYGSHISLSGSLIDAYAKCESLASA 253
Query: 387 RLAYKRISTPDLVSQNAMLTAYAM-HGHGKEGIAHFRRILASGFRPDHISFLSALSACVH 445
YK + D++S A++T YA + + + F+ I + D + S + C +
Sbjct: 254 HCLYKSMPMKDMISCTALMTGYARDSNYSSKALDLFKEIQQMHMKIDDVILCSMFNICAN 313
Query: 446 AGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGA 505
S+ G + L + ++D+ +++GE+ +A ++ + + W +
Sbjct: 314 ISSLSVGRQIHALALKCKPTYDVAMGNALIDMYAKSGEIKDANRAFNEME-EKNVISWTS 372
Query: 506 LLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFA 545
L+ G SHG+ IA + +E E + L+ LFA
Sbjct: 373 LITGYGSHGH-GHEAIALFKKMEYEGLKPNDITFLSLLFA 411
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 145/319 (45%), Gaps = 4/319 (1%)
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C + + + G IH + G S+ + L+ Y + D V+A+ FD + +
Sbjct: 7 CIETKAKKPGHLIHNQILTNGFASNIHLSTKLIIFYSKLGDTVSARKVFDRMPERTVVSW 66
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
+ G+ N +A+ +F +ML + +T G +L AC+ L ++RG Q+ +
Sbjct: 67 SAQISGYSQNGCYQDALLVFLDMLRAGFKANQFTYGSVLRACTGLRCLQRGMQIQGCLEK 126
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
+ S++ + +AL+D+++KCG ++ A + + D+VS NA++ AYA+ G +
Sbjct: 127 SRFASNLIVQSALLDLHSKCGKMEDASYLFGMMEERDVVSWNAIIGAYAVQGFSGDSFRM 186
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSR 480
FR ++ G PD +F S L A A + + L+ + ++D ++
Sbjct: 187 FRSMMQEGMSPDLFTFGSVLKASGMASDVIRVCQIHQLIIQLGYGSHISLSGSLIDAYAK 246
Query: 481 AGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTG-NYVM 539
L A+ K +PM D + AL+ G N + A D E++ + + V+
Sbjct: 247 CESLASAHCLYKSMPM-KDMISCTALMTGYARDSN--YSSKALDLFKEIQQMHMKIDDVI 303
Query: 540 LANLFAYAGRWSDLARTRQ 558
L ++F S L+ RQ
Sbjct: 304 LCSMFNICANISSLSVGRQ 322
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 78/183 (42%), Gaps = 38/183 (20%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G + DA + F M E++ +SW S++T
Sbjct: 345 MYAKSGEIKDANRAFNEMEEKNVISWTSLIT----------------------------- 375
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKE-FHGY 119
G+ +G+ EAI + +M+ EGL+PN T S+L AC G E F+
Sbjct: 376 -------GYGSHGHGHEAIALFKKMEYEGLKPNDITFLSLLFACNHCGLTGEGWECFNNM 428
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCE-NGNVAE 178
I++ + + +VD++ R G + A + +K +IK S I+G C GN+
Sbjct: 429 ISKYNILPRAEHFSCMVDLFARGGLLEEAYNLINKMNIKPNASLWGAILGACYIYGNMPL 488
Query: 179 ARE 181
A E
Sbjct: 489 AEE 491
>gi|15223562|ref|NP_176050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173051|sp|Q9FXA9.1|PPR83_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g56570
gi|9954755|gb|AAG09106.1|AC009323_17 Hypothetical protein [Arabidopsis thaliana]
gi|332195289|gb|AEE33410.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 611
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 183/599 (30%), Positives = 310/599 (51%), Gaps = 72/599 (12%)
Query: 19 PERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEA 78
P++ + +++ + GLV EA + M D +V+W+A+I G+ + Y+ A
Sbjct: 41 PKKHHILATNLIVSYFEKGLVEEARSLFDEMPDRD-----VVAWTAMITGYASSNYNARA 95
Query: 79 IGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDV 138
M +G PN TLSSVL +C ++ L+ G HG + + G + +V N ++++
Sbjct: 96 WECFHEMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNM 155
Query: 139 YRRCG-DMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIIS 197
Y C M +A IF +KN+V+ T+I G+ HLG G
Sbjct: 156 YATCSVTMEAACLIFRDIKVKNDVTWTTLITGFT----------------HLGDGIG--- 196
Query: 198 WNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALA 257
M++ +L+ + E T + + A A ++S+ GK+IHA
Sbjct: 197 ----------------GLKMYKQMLLENA-EVTPYCITIAVRASASIDSVTTGKQIHASV 239
Query: 258 IALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWN-- 315
I G QS+ V +++++YCR L A+ F E+E + ++ TWN
Sbjct: 240 IKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEME--------------DKDLITWNTL 285
Query: 316 -----------AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYD 364
A+ +F S P+ YT +++AC+++A + G+Q+H R G++
Sbjct: 286 ISELERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFN 345
Query: 365 SDVHIGTALVDMYAKCGSLKHARLAYKRI-STPDLVSQNAMLTAYAMHGHGKEGIAHFRR 423
+V + AL+DMYAKCG++ ++ + I +LVS +M+ Y HG+G E + F +
Sbjct: 346 KNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDK 405
Query: 424 ILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMVDLLSRAG 482
+++SG RPD I F++ LSAC HAG ++ G ++F++M + Y + P Y C+VDLL RAG
Sbjct: 406 MVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAG 465
Query: 483 ELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG-NLEFGQIAADRLIELEPNNTGNYVMLA 541
++GEAYE ++++P PD WGA+LG C +H N ++AA +++EL+P G YVML+
Sbjct: 466 KIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVMLS 525
Query: 542 NLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTII 600
++A G+W D AR R+ M+ K G SWI +++ F SD+ + +Y+++
Sbjct: 526 YIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSDKMCPNASSVYSVL 584
>gi|297828580|ref|XP_002882172.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297328012|gb|EFH58431.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 638
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 181/550 (32%), Positives = 291/550 (52%), Gaps = 40/550 (7%)
Query: 55 ETPNLVSWSAVIGGFTQNGYDEEAIGMLFRM-QAEGLEPNARTLSSVLPACARLQKLSLG 113
E P++V+WS+++ GF +NG +A+ RM A + P+ TL +++ AC +L LG
Sbjct: 104 EKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMATASDVTPDRVTLITLVSACTKLSNSRLG 163
Query: 114 KEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCEN 173
+ HG++ R GF ++ +VN L++ Y + A+ +F + K+ +S +T+I Y +N
Sbjct: 164 RCVHGFVMRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMMAEKDVISWSTVIACYVQN 223
Query: 174 GNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFT 233
G AEA +F++M + DG EP T
Sbjct: 224 GAAAEALRVFNEM------------------------------------IDDGTEPNVAT 247
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
VL ACA N L +G++ H LAI GL+++ V ALV+MY + A F I
Sbjct: 248 VLCVLQACAAANDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIP 307
Query: 294 NIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLT-PDIYTVGIILSACSSLATMERGK 352
+ + GF N +++ FS ML + T PD + +L +CS L +++ +
Sbjct: 308 KKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMLKVLGSCSELGFLKQAE 367
Query: 353 QVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHG 412
H+Y I+ G+DS+ IG +LV++Y++CGSL +A + I+ D V +++T Y +HG
Sbjct: 368 CFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNEIALKDTVVWTSLITGYGIHG 427
Query: 413 HGKEGIAHFRRIL-ASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKH 470
G + + F ++ +S +P+ ++FLS LSAC HAG I G F+LM Y + P+L+H
Sbjct: 428 KGTKALETFNHMVRSSEVKPNEVTFLSILSACSHAGLIHEGLRIFELMVNDYRLAPNLEH 487
Query: 471 YTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELE 530
Y +VDLL R GEL A E K++P +P + G LLG C H N E + A +L ELE
Sbjct: 488 YAVLVDLLGRVGELDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKQLFELE 547
Query: 531 PNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSH 590
N+ G Y++++N++ G W ++ + R +K R + K S IE R ++HKF A D H
Sbjct: 548 SNHAGYYMLMSNMYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHKFVADDDLH 607
Query: 591 DRSEEIYTII 600
E +Y ++
Sbjct: 608 PEKEPVYGLL 617
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 181/370 (48%), Gaps = 8/370 (2%)
Query: 191 VQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKG 250
+R + WN+++ + +++ F + RD +P +FT L AC ++ ++ G
Sbjct: 2 TKRTLYQWNTLLKSLSRDKHWEQVMCHFSQMF-RDEEKPDNFTLPVALKACGELREVKYG 60
Query: 251 KEIHA-LAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEP 309
+ IH L + L SD +VG +L+ MY + + A F+E+E + + GFE
Sbjct: 61 EMIHGFLKKNVTLGSDLYVGSSLIYMYVKCGRMTEALRMFNELEKPDIVTWSSMVSGFEK 120
Query: 310 NVYTWNAMQLFSEMLSL-DLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVH 368
N + A++ F M + D+TPD T+ ++SAC+ L+ G+ VH + +R G+ +D+
Sbjct: 121 NGSPYQAVEFFRRMATASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVMRRGFSNDLS 180
Query: 369 IGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASG 428
+ +L++ YAK + K A +K ++ D++S + ++ Y +G E + F ++ G
Sbjct: 181 LVNSLLNCYAKSRAFKEAVNLFKMMAEKDVISWSTVIACYVQNGAAAEALRVFNEMIDDG 240
Query: 429 FRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAY 488
P+ + L L AC A ++ G + +L ++ +K T +VD+ + EAY
Sbjct: 241 TEPNVATVLCVLQACAAANDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAY 300
Query: 489 EFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAG 548
+IP D V W AL+ G +G + I ++ LE N + +++ + G
Sbjct: 301 AVFSRIP-KKDVVSWVALISGFTLNG-MAHRSIEEFSIMLLENNTRPDAILMLKVL---G 355
Query: 549 RWSDLARTRQ 558
S+L +Q
Sbjct: 356 SCSELGFLKQ 365
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 104/394 (26%), Positives = 173/394 (43%), Gaps = 47/394 (11%)
Query: 27 NSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQ 86
NS++ A + EA+ + M+ D ++SWS VI + QNG EA+ + M
Sbjct: 183 NSLLNCYAKSRAFKEAVNLFKMMAEKD-----VISWSTVIACYVQNGAAAEALRVFNEMI 237
Query: 87 AEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDML 146
+G EPN T+ VL ACA L G++ H R G + V LVD+Y +C
Sbjct: 238 DDGTEPNVATVLCVLQACAAANDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPE 297
Query: 147 SALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYV 206
A +FS+ K+ VS +I G+ NG M H +
Sbjct: 298 EAYAVFSRIPKKDVVSWVALISGFTLNG-----------MAHRSI--------------- 331
Query: 207 DNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDT 266
E FS+ +L+ + P + VL +C+++ L++ + H+ I G S+
Sbjct: 332 ------EEFSI---MLLENNTRPDAILMLKVLGSCSELGFLKQAECFHSYVIKYGFDSNP 382
Query: 267 FVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEML-S 325
F+G +LVE+Y R L A F+EI + ++ G+ + A++ F+ M+ S
Sbjct: 383 FIGASLVELYSRCGSLGNASKVFNEIALKDTVVWTSLITGYGIHGKGTKALETFNHMVRS 442
Query: 326 LDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR-CGYDSDVHIGTALVDMYAKCGSLK 384
++ P+ T ILSACS + G ++ + ++ LVD+ + G L
Sbjct: 443 SEVKPNEVTFLSILSACSHAGLIHEGLRIFELMVNDYRLAPNLEHYAVLVDLLGRVGELD 502
Query: 385 HARLAYKRI---STPDLVSQNAMLTAYAMHGHGK 415
A KR+ TP ++ +L A +H +G+
Sbjct: 503 TAIEITKRMPFSPTPQILG--TLLGACRIHQNGE 534
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 109/226 (48%), Gaps = 37/226 (16%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC S ++A VF +P++D VSW ++++ NG+ ++E M +N P
Sbjct: 289 MYMKCFSPEEAYAVFSRIPKKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRP--- 345
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+AI ML VL +C+ L L + FH Y+
Sbjct: 346 ----------------DAILML----------------KVLGSCSELGFLKQAECFHSYV 373
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ GF SNPF+ LV++Y RCG + +A K+F++ ++K+ V ++I GY +G +A
Sbjct: 374 IKYGFDSNPFIGASLVELYSRCGSLGNASKVFNEIALKDTVVWTSLITGYGIHGKGTKAL 433
Query: 181 ELFDQMEHLG-VQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRD 225
E F+ M V+ +++ S++S L E +F +L++ D
Sbjct: 434 ETFNHMVRSSEVKPNEVTFLSILSACSHAGLIHEGLRIF-ELMVND 478
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 62/141 (43%), Gaps = 4/141 (2%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y +CGSL +A KVF + +D V W S++T +G +ALE M PN V
Sbjct: 391 LYSRCGSLGNASKVFNEIALKDTVVWTSLITGYGIHGKGTKALETFNHMVRSSEVKPNEV 450
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
++ +++ + G E + + M + L PN + ++ R+ +L E
Sbjct: 451 TFLSILSACSHAGLIHEGLRIFELMVNDYRLAPNLEHYAVLVDLLGRVGELDTAIEI--- 507
Query: 120 ITRNGFMSNPFVVNGLVDVYR 140
R F P ++ L+ R
Sbjct: 508 TKRMPFSPTPQILGTLLGACR 528
>gi|224125246|ref|XP_002319538.1| predicted protein [Populus trichocarpa]
gi|222857914|gb|EEE95461.1| predicted protein [Populus trichocarpa]
Length = 577
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 188/603 (31%), Positives = 301/603 (49%), Gaps = 76/603 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G L DA K+F MP RD V
Sbjct: 1 MYAKNGVLTDAAKLFDEMPMRDTV------------------------------------ 24
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGL-EPNARTLSSVLPACARLQKLSLGKEFHGY 119
SW+ +I GF ++G + G +MQ+ G + TL+++L AC R + + K H
Sbjct: 25 SWNIMISGFLKDGSFDVGFGFFKQMQSLGFYRLDQATLTTILSACDRPELGFVNKMVHCL 84
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
NGF V N L+ Y +CG S +++
Sbjct: 85 AVLNGFQREISVGNALITSYFKCGFSSSGMQV---------------------------- 116
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDG-IEPTSFTFGSVL 238
FD+M ++R +I+W ++ISG V + LY ++ +F + M +G +EP S T+ S L
Sbjct: 117 ---FDEM----LERNVITWTAIISGLVQSELYRDSLRLFVE--MTNGLVEPNSLTYLSSL 167
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
+AC+ + +LR+G +IH LGLQSD V AL++MY + + F+ ++ +
Sbjct: 168 MACSGLQALREGCQIHGRVWKLGLQSDFCVESALMDMYSKCGSMGDTLQIFESAGQLDKV 227
Query: 299 LGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYA 358
+ GF N + AMQ F +ML D V +L + ++ G+Q+H+
Sbjct: 228 SMTIILAGFAQNGFEEEAMQFFVKMLEAGTEIDSNMVSAVLGVFGADTSLGLGQQIHSLV 287
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGI 418
I+ + S+ +G L++MY+KCG L+ + + R+ + VS N+M+ A+A HG G +
Sbjct: 288 IKRSFGSNPFVGNGLINMYSKCGDLEDSTKVFSRMPCMNSVSWNSMIAAFARHGDGSRAL 347
Query: 419 AHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDL 477
++ + G P ++FLS L AC H G ++ G EF M + + P ++HY C+VD+
Sbjct: 348 QLYKEMRLKGVEPTDVTFLSLLHACSHVGLVEKGMEFLKSMTEVHKLTPRMEHYACVVDM 407
Query: 478 LSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNY 537
L RAG L EA FI+ +P+ PD ++W ALLG C HG+ E G+ AA+ LI P Y
Sbjct: 408 LGRAGLLNEAKTFIEGLPIKPDVLVWQALLGACGIHGDPEMGKYAAEHLILSAPEKPSPY 467
Query: 538 VMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
++LAN+++ GRW + A+T ++MK+ + K G SWIE + +H F D+ H ++E IY
Sbjct: 468 ILLANIYSSKGRWKERAKTIKRMKEMCVAKETGISWIEIENNLHSFVVEDKMHPQAEIIY 527
Query: 598 TII 600
++
Sbjct: 528 GVL 530
>gi|224057446|ref|XP_002299231.1| predicted protein [Populus trichocarpa]
gi|222846489|gb|EEE84036.1| predicted protein [Populus trichocarpa]
Length = 668
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 191/586 (32%), Positives = 310/586 (52%), Gaps = 71/586 (12%)
Query: 45 CLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPA 103
C++ +++L N PN+ SW+AVI G ++ ++ + + RM G P+ T S +
Sbjct: 106 CIKILNNLQN--PNVFSWNAVIRGCVESENPQKGLVLYKRMLTRAGCRPDNYTYSFLFKV 163
Query: 104 CARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSC 163
CA L +G E G + + GF + ++ NG++ + G+ S L
Sbjct: 164 CANLVLSYMGFEILGQVLKMGFDKDMYLYNGIIHMLVSVGE--SGL-------------- 207
Query: 164 NTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLM 223
A ++FD+ G R ++SWNS+I+GYV EA +++ ++
Sbjct: 208 ---------------AHKVFDE----GCVRDLVSWNSLINGYVRRRQPREAMGIYQQMI- 247
Query: 224 RDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLV 283
+ ++P T V+ ACA + SL+ G+EIH GL + AL++MY + DL
Sbjct: 248 TEHVKPDEVTMIGVVSACAQLESLKLGREIHRYIEESGLNLKISLVNALMDMYVKCGDLE 307
Query: 284 AAQMAFDEIEN-----------------IENLLGKMKEDGFEPNVYTWNAM--------- 317
A ++ FD + + ++ GK+ D E NV WNAM
Sbjct: 308 AGKVLFDNMRKKTVVSWTTMIVGYAKNGLLDMAGKLFHDMPEKNVVAWNAMIGSCVQANL 367
Query: 318 -----QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTA 372
+LF EM ++ PD T+ LSACS L ++ G H Y + DV +GTA
Sbjct: 368 SFEALELFREMQWSNMKPDKVTMLHCLSACSQLGALDTGMWTHNYIKKHNLSLDVALGTA 427
Query: 373 LVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPD 432
L+DMYAKCG++ A + + + ++ A++ A++G+ + I +F +++ SG PD
Sbjct: 428 LIDMYAKCGNMTKALQVFNEMPRRNSLTWTAIIGGLALYGNVNDAIFYFSKMIDSGLMPD 487
Query: 433 HISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMVDLLSRAGELGEAYEFI 491
I+FL L+AC H G ++ G ++FD M + +++ P KHY+CMV+LL RAG L EA E I
Sbjct: 488 EITFLGVLTACCHGGLVEEGRKYFDQMKSRFNLSPQPKHYSCMVNLLGRAGLLEEAEELI 547
Query: 492 KKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWS 551
K +PM D+++WGAL C H NL G+ AA +L++L+P+++G YV+LAN++ AG+W
Sbjct: 548 KTMPMEADAMVWGALFFACGIHRNLLIGERAASKLLDLDPHDSGIYVLLANMYREAGKWE 607
Query: 552 DLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
+ R+ M +R + K+PG S IE I++F D+SH +SE+IY
Sbjct: 608 EAQNIRKMMMERGVEKTPGSSSIEVNGIINEFIVRDKSHPQSEQIY 653
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 159/343 (46%), Gaps = 41/343 (11%)
Query: 11 AKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFT 70
A KVF RD VSWNS +I G+
Sbjct: 208 AHKVFDEGCVRDLVSWNS------------------------------------LINGYV 231
Query: 71 QNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPF 130
+ EA+G+ +M E ++P+ T+ V+ ACA+L+ L LG+E H YI +G
Sbjct: 232 RRRQPREAMGIYQQMITEHVKPDEVTMIGVVSACAQLESLKLGREIHRYIEESGLNLKIS 291
Query: 131 VVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLG 190
+VN L+D+Y +CGD+ + +F K VS T+IVGY +NG + A +LF M
Sbjct: 292 LVNALMDMYVKCGDLEAGKVLFDNMRKKTVVSWTTMIVGYAKNGLLDMAGKLFHDMP--- 348
Query: 191 VQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKG 250
++ +++WN+MI V +L EA +FR++ + ++P T L AC+ + +L G
Sbjct: 349 -EKNVVAWNAMIGSCVQANLSFEALELFREMQWSN-MKPDKVTMLHCLSACSQLGALDTG 406
Query: 251 KEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPN 310
H L D +G AL++MY + ++ A F+E+ +L G
Sbjct: 407 MWTHNYIKKHNLSLDVALGTALIDMYAKCGNMTKALQVFNEMPRRNSLTWTAIIGGLALY 466
Query: 311 VYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ 353
+A+ FS+M+ L PD T +L+AC +E G++
Sbjct: 467 GNVNDAIFYFSKMIDSGLMPDEITFLGVLTACCHGGLVEEGRK 509
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 144/298 (48%), Gaps = 12/298 (4%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETP--N 58
MY KCG L+ K +F M ++ VSW +++ A NGL L+ L ++ P N
Sbjct: 299 MYVKCGDLEAGKVLFDNMRKKTVVSWTTMIVGYAKNGL-------LDMAGKLFHDMPEKN 351
Query: 59 LVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHG 118
+V+W+A+IG Q EA+ + MQ ++P+ T+ L AC++L L G H
Sbjct: 352 VVAWNAMIGSCVQANLSFEALELFREMQWSNMKPDKVTMLHCLSACSQLGALDTGMWTHN 411
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
YI ++ + + L+D+Y +CG+M AL++F++ +N ++ II G GNV +
Sbjct: 412 YIKKHNLSLDVALGTALIDMYAKCGNMTKALQVFNEMPRRNSLTWTAIIGGLALYGNVND 471
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
A F +M G+ I++ +++ L +E F + R + P + ++
Sbjct: 472 AIFYFSKMIDSGLMPDEITFLGVLTACCHGGLVEEGRKYFDQMKSRFNLSPQPKHYSCMV 531
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
L + +E L + +++D V GAL +++L+ + A ++ +++
Sbjct: 532 NLLGRAGLLEEAEE---LIKTMPMEADAMVWGALFFACGIHRNLLIGERAASKLLDLD 586
>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 833
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 203/675 (30%), Positives = 331/675 (49%), Gaps = 88/675 (13%)
Query: 1 MYGKCGSLDDAK-------KVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLD 53
++ +C L DA + + + + N+++ + G V EA + + S++
Sbjct: 63 LFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEARQIFD---SVE 119
Query: 54 NETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLG 113
N+T +V+W+A+I G+ Q G+ +EA + +M EGLEP+ T SVL AC+ L+ G
Sbjct: 120 NKT--VVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGLNWG 177
Query: 114 KEFHGYITRNGFMSNPFVVNGLVDV-------------------------------YRRC 142
KE H + GF+S+ + LV + Y +
Sbjct: 178 KEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYAKS 237
Query: 143 GDMLSALKIFSKFS----IKNEVSCNTIIVG----------------------------- 169
GD A ++F + N++S +I+ G
Sbjct: 238 GDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIRVA 297
Query: 170 ------YCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLM 223
Y G++ AR +FD M+ R ++SW MI GY +N ++AF +F +
Sbjct: 298 TSLIRMYTTCGSIEGARRVFDNMK----VRDVVSWTVMIEGYAENGNIEDAFGLFATM-Q 352
Query: 224 RDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLV 283
+GI+P T+ ++ ACA +L +EIH+ G +D V ALV MY + +
Sbjct: 353 EEGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCGAIK 412
Query: 284 AAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACS 343
A+ FD + + + + N Y A + F M ++ PD T +L+AC
Sbjct: 413 DARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGVTYINLLNACG 472
Query: 344 SLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNA 403
L ++ G +++ AI+ S V +G AL+ M AK GS++ AR + + D+++ NA
Sbjct: 473 HLGALDVGMEIYTQAIKADLVSHVPLGNALIIMNAKHGSVERARYIFDTMVRRDVITWNA 532
Query: 404 MLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFD-LMAYY 462
M+ Y++HG+ +E + F R+L FRP+ ++F+ LSAC AG + G FF L+
Sbjct: 533 MIGGYSLHGNAREALYLFDRMLKERFRPNSVTFVGVLSACSRAGFVDEGRRFFTYLLEGR 592
Query: 463 DVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIA 522
+ P++K Y CMVDLL RAGEL EA IK +P+ P S +W +LL C HGNL+ + A
Sbjct: 593 GIVPTVKLYGCMVDLLGRAGELDEAELLIKSMPVKPTSSIWSSLLVACRIHGNLDVAERA 652
Query: 523 ADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHK 582
A+R + ++P + YV L++++A AG W ++A+ R+ M+ R + K GC+WIE ++H
Sbjct: 653 AERCLMIDPYDGAVYVQLSHMYAAAGMWENVAKVRKVMESRGIRKEQGCTWIEVAGKVHT 712
Query: 583 FRASDRSHDRSEEIY 597
F DRSH EIY
Sbjct: 713 FVVEDRSHPLVGEIY 727
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 134/521 (25%), Positives = 234/521 (44%), Gaps = 68/521 (13%)
Query: 81 MLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYR 140
+L R+ G ++RT + C L+ +LGK+ +I + G N + +N L+ +Y
Sbjct: 44 VLQRLGEGGNHIDSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYS 103
Query: 141 RCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISW-- 198
CG++ A +IF K V+ N +I GY + G+V EA LF QM G++ II++
Sbjct: 104 ICGNVTEARQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLS 163
Query: 199 ---------------------------------NSMISGYVDNSLYDEAFSMFRDLLMRD 225
+++S YV D+A +F L +RD
Sbjct: 164 VLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRD 223
Query: 226 ------------------------------GIEPTSFTFGSVLIACADMNSLRKGKEIHA 255
G++P +F S+L C +L GK +HA
Sbjct: 224 VSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHA 283
Query: 256 LAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWN 315
+ GL D V +L+ MY + A+ FD ++ + + + +G+ N +
Sbjct: 284 QCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIED 343
Query: 316 AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVD 375
A LF+ M + PD T I++AC+ A + +++H+ G+ +D+ + TALV
Sbjct: 344 AFGLFATMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVSTALVH 403
Query: 376 MYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHIS 435
MYAKCG++K AR + + D+VS +AM+ AY +G+G E F + S PD ++
Sbjct: 404 MYAKCGAIKDARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGVT 463
Query: 436 FLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIP 495
+++ L+AC H G++ G E + D+ + ++ + ++ G + E +I
Sbjct: 464 YINLLNACGHLGALDVGMEIYTQAIKADLVSHVPLGNALIIMNAKHGSV-ERARYIFDTM 522
Query: 496 MAPDSVMWGALLGGCVSHGNLEFGQIAADRLIE--LEPNNT 534
+ D + W A++GG HGN DR+++ PN+
Sbjct: 523 VRRDVITWNAMIGGYSLHGNAREALYLFDRMLKERFRPNSV 563
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 144/318 (45%), Gaps = 6/318 (1%)
Query: 220 DLLMR---DGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMY 276
D+L R G S T+ + C ++ GK++ I G Q + + L+++Y
Sbjct: 43 DVLQRLGEGGNHIDSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLY 102
Query: 277 CRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVG 336
++ A+ FD +EN + G+ + A LF +M+ L P I T
Sbjct: 103 SICGNVTEARQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFL 162
Query: 337 IILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTP 396
+L ACSS A + GK+VHA + G+ SD IGTALV MY K GS+ AR + +
Sbjct: 163 SVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIR 222
Query: 397 DLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFF 456
D+ + N M+ YA G ++ F R+ G +P+ ISFLS L C ++ G
Sbjct: 223 DVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVH 282
Query: 457 DLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNL 516
+ ++ T ++ + + G + A + + D V W ++ G +GN+
Sbjct: 283 AQCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVR-DVVSWTVMIEGYAENGNI 341
Query: 517 E--FGQIAADRLIELEPN 532
E FG A + ++P+
Sbjct: 342 EDAFGLFATMQEEGIQPD 359
>gi|115462637|ref|NP_001054918.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|48475165|gb|AAT44234.1| unknown protein, contains PPR repeat [Oryza sativa Japonica Group]
gi|113578469|dbj|BAF16832.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|215695208|dbj|BAG90399.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222630605|gb|EEE62737.1| hypothetical protein OsJ_17540 [Oryza sativa Japonica Group]
Length = 822
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 170/545 (31%), Positives = 300/545 (55%), Gaps = 43/545 (7%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
+V W+ +I + Q EEA+ + +G EP+ T+SS++ AC L + LG + H
Sbjct: 218 TVVVWTLLISRYVQGECAEEAVEIFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLH 277
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
R GF S+ V GLVD+Y +K +I+ +
Sbjct: 278 SLALRMGFASDACVSCGLVDMY-------------AKSNIEQAMD--------------- 309
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
A ++F++M + +ISW ++ISGYV + + + + ++ + I+P T+ S+
Sbjct: 310 YANKVFERMR----KNDVISWTALISGYVQSGVQENKVMVLFGEMLNESIKPNHITYSSI 365
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
L ACA+++ G+++HA I + VG ALV MY + A+ F+++ +
Sbjct: 366 LKACANISDHDSGRQVHAHVIKSNQAAAHTVGNALVSMYAESGCMEEARRVFNQLYE-RS 424
Query: 298 LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAY 357
++ + E P L + +D+ T ++SA +S+ + +G+Q+HA
Sbjct: 425 MISCITEGRDAP---------LDHRIGRMDMGISSSTFASLISAAASVGMLTKGQQLHAM 475
Query: 358 AIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEG 417
++ G+ SD + +LV MY++CG L+ A ++ + +++S +M++ A HG+ +
Sbjct: 476 TLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERA 535
Query: 418 IAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVD 476
++ F ++ +G +P+ +++++ LSAC H G ++ G E+F M + + P ++HY CMVD
Sbjct: 536 LSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYACMVD 595
Query: 477 LLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGN 536
LL+R+G + EA EFI ++P+ D+++W LLG C SH N+E G+IAA +IELEP +
Sbjct: 596 LLARSGLVKEALEFINEMPLKADALVWKTLLGACRSHDNIEVGEIAAKNVIELEPRDPAP 655
Query: 537 YVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEI 596
YV+L+NL+A AG W ++AR R M+D ++K G SW+E + H+FRA D SH R+++I
Sbjct: 656 YVLLSNLYADAGLWDEVARIRSAMRDNNLNKETGLSWMEVENTTHEFRAGDTSHPRAQDI 715
Query: 597 YTIID 601
Y +D
Sbjct: 716 YGKLD 720
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 108/451 (23%), Positives = 199/451 (44%), Gaps = 59/451 (13%)
Query: 158 KNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSM 217
++ V N+++ Y G VA AR +FD M L R I+SW +M S N E+ +
Sbjct: 82 RDAVVANSLLTLYSRCGAVASARNVFDGMRGL---RDIVSWTAMASCLARNGAERESLLL 138
Query: 218 FRDLLMRDGIEPTSFTFGSVLIACAD-----MNSLRKGKEIHALAIALGLQSDTFVGGAL 272
++L G+ P ++T +V AC + +H + + +D VG AL
Sbjct: 139 IGEML-ESGLLPNAYTLCAVAHACFPHELYCLVGGVVLGLVHKMGL---WGTDIAVGSAL 194
Query: 273 VEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDI 332
++M R DL +A+ FD + ++ + + A+++F + L PD
Sbjct: 195 IDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVEIFLDFLEDGFEPDR 254
Query: 333 YTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCG---SLKHARLA 389
YT+ ++SAC+ L ++ G Q+H+ A+R G+ SD + LVDMYAK ++ +A
Sbjct: 255 YTMSSMISACTELGSVRLGLQLHSLALRMGFASDACVSCGLVDMYAKSNIEQAMDYANKV 314
Query: 390 YKRISTPDLVSQNAMLTAYAMHGHGKEGI-AHFRRILASGFRPDHISFLSALSACVHAGS 448
++R+ D++S A+++ Y G + + F +L +P+HI++ S L AC +
Sbjct: 315 FERMRKNDVISWTALISGYVQSGVQENKVMVLFGEMLNESIKPNHITYSSILKACANISD 374
Query: 449 IKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEA-------YE------------ 489
+G + + + + +V + + +G + EA YE
Sbjct: 375 HDSGRQVHAHVIKSNQAAAHTVGNALVSMYAESGCMEEARRVFNQLYERSMISCITEGRD 434
Query: 490 -----FIKKIPMAPDSVMWGALLGGCVSHGNLEFGQ----------IAADRLIELEPNNT 534
I ++ M S + +L+ S G L GQ +DR + +N+
Sbjct: 435 APLDHRIGRMDMGISSSTFASLISAAASVGMLTKGQQLHAMTLKAGFGSDRFV----SNS 490
Query: 535 GNYVMLANLFAYAGRWSDLARTRQKMKDRRM 565
L ++++ G D R+ ++KDR +
Sbjct: 491 -----LVSMYSRCGYLEDACRSFNELKDRNV 516
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 110/447 (24%), Positives = 182/447 (40%), Gaps = 98/447 (21%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
M + G L A+KVF + E+ +V
Sbjct: 197 MLARNGDLASARKVFDGLIEK------------------------------------TVV 220
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
W+ +I + Q EEA+ + +G EP+ T+SS++ AC L + LG + H
Sbjct: 221 VWTLLISRYVQGECAEEAVEIFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLA 280
Query: 121 TRNGFMSNPFVVNGLVDVYRRCG---DMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
R GF S+ V GLVD+Y + M A K+F + + +S +I GY ++G V
Sbjct: 281 LRMGFASDACVSCGLVDMYAKSNIEQAMDYANKVFERMRKNDVISWTALISGYVQSG-VQ 339
Query: 178 EAR--ELFDQMEHLGVQRGIISW-----------------------------------NS 200
E + LF +M + ++ I++ N+
Sbjct: 340 ENKVMVLFGEMLNESIKPNHITYSSILKACANISDHDSGRQVHAHVIKSNQAAAHTVGNA 399
Query: 201 MISGYVDNSLYDEAFSMFRDLLMRDGIE--------P------------TSFTFGSVLIA 240
++S Y ++ +EA +F L R I P +S TF S++ A
Sbjct: 400 LVSMYAESGCMEEARRVFNQLYERSMISCITEGRDAPLDHRIGRMDMGISSSTFASLISA 459
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
A + L KG+++HA+ + G SD FV +LV MY R L A +F+E+++ +
Sbjct: 460 AASVGMLTKGQQLHAMTLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISW 519
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G + Y A+ LF +M+ + P+ T +LSACS + + GK+ R
Sbjct: 520 TSMISGLAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQR 579
Query: 361 -CGYDSDVHIGTALVDMYAKCGSLKHA 386
G + +VD+ A+ G +K A
Sbjct: 580 DHGLIPRMEHYACMVDLLARSGLVKEA 606
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 129/303 (42%), Gaps = 23/303 (7%)
Query: 247 LRKGKEIHA-LAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG-KMKE 304
LR G+ +H L L D V +L+ +Y R + +A+ FD + + +++
Sbjct: 64 LRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMA 123
Query: 305 DGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSS-----LATMERGKQVHAYAI 359
N ++ L EML L P+ YT+ + AC L VH +
Sbjct: 124 SCLARNGAERESLLLIGEMLESGLLPNAYTLCAVAHACFPHELYCLVGGVVLGLVHKMGL 183
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
+ +D+ +G+AL+DM A+ G L AR + + +V +++ Y +E +
Sbjct: 184 ---WGTDIAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVE 240
Query: 420 HFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLS 479
F L GF PD + S +SAC GS++ G + L +VD+ +
Sbjct: 241 IFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGFASDACVSCGLVDMYA 300
Query: 480 RAGELGEAYEFIKKI---PMAPDSVMWGALLGGCVSHGNLE------FGQIAADRLIELE 530
++ + +A ++ K+ D + W AL+ G V G E FG++ + ++
Sbjct: 301 KSN-IEQAMDYANKVFERMRKNDVISWTALISGYVQSGVQENKVMVLFGEMLNE---SIK 356
Query: 531 PNN 533
PN+
Sbjct: 357 PNH 359
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 91/214 (42%), Gaps = 37/214 (17%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +CG L+DA + F + +R N++
Sbjct: 494 MYSRCGYLEDACRSFNELKDR------------------------------------NVI 517
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+++I G ++GY E A+ + M G++PN T +VL AC+ + + GKE+ +
Sbjct: 518 SWTSMISGLAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSM 577
Query: 121 TRN-GFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
R+ G + +VD+ R G + AL+ ++ +K + ++G C + + E
Sbjct: 578 QRDHGLIPRMEHYACMVDLLARSGLVKEALEFINEMPLKADALVWKTLLGACRSHDNIEV 637
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDE 213
E+ + R + + + Y D L+DE
Sbjct: 638 GEIAAKNVIELEPRDPAPYVLLSNLYADAGLWDE 671
>gi|449518693|ref|XP_004166371.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Cucumis sativus]
Length = 792
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 186/620 (30%), Positives = 313/620 (50%), Gaps = 77/620 (12%)
Query: 5 CGSLDDAK-------KVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETP 57
C LDD K V K D ++ N++++ + +A+ R+ D
Sbjct: 209 CSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKD---- 264
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGL-EPNARTLSSVLPACARLQKLSLGKEF 116
L+SW ++I GF+Q GY+ EA+ M ++ + +PN S AC++L + G++
Sbjct: 265 -LISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQI 323
Query: 117 HGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNV 176
HG + G S+ F L D+Y +CG + SA
Sbjct: 324 HGLCIKFGLGSDLFAGCSLCDMYAKCGFLESA---------------------------- 355
Query: 177 AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGS 236
R +F +E + +++WN++I+G+ S E+ S F + G+ P T S
Sbjct: 356 ---RTVFYHIE----KPDLVAWNAIIAGFASVSNAKESSSFFSQM-RHTGLVPNDVTVLS 407
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
+L AC++ L G ++H+ + +G D V +L+ MY + +L A F++I N
Sbjct: 408 LLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFEDIGN-- 465
Query: 297 NLLGKMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSAC 342
+ ++ +WN + +L M + + PD T+ +L +
Sbjct: 466 -----------KADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSS 514
Query: 343 SSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQN 402
+A+ E G Q+H + ++ G + D+ + AL++MY KCGSL+ AR + I PD++S +
Sbjct: 515 GQIASYEVGSQIHCFIMKSGLNLDISVSNALINMYTKCGSLECARKMFDSIGNPDIISWS 574
Query: 403 AMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY- 461
+++ YA G GKE FR + G +P+ I+F+ L+AC H G ++ G + + M
Sbjct: 575 SLIVGYAQAGCGKEAFELFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYRTMQED 634
Query: 462 YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQI 521
Y + P+ +H +CMVDLL+RAG L A +FI+++P PD V+W LL C HGNLE G+
Sbjct: 635 YRISPTKEHCSCMVDLLARAGCLDVAEDFIRQMPFVPDVVVWKTLLAACKVHGNLEVGKR 694
Query: 522 AADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIH 581
AA+ +++++P+N+ VML N+ A +G W D AR R M+ + K PG SWIE +D++H
Sbjct: 695 AAENVLKIDPSNSAAVVMLCNIHASSGHWKDFARLRSSMRRMDVGKVPGQSWIEIKDKVH 754
Query: 582 KFRASDRSHDRSEEIYTIID 601
F A D H +IYT+++
Sbjct: 755 VFLAEDNLHPERGKIYTMLE 774
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 133/524 (25%), Positives = 233/524 (44%), Gaps = 101/524 (19%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKCGSL +A+ +F MP + N+V
Sbjct: 142 MYGKCGSLKEARNMFDSMPLK------------------------------------NVV 165
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+++I G+++ G ++ AI + +M G P+ T S++ +C+ L L ++ H ++
Sbjct: 166 SWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDFKLARQLHAHV 225
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
++ F ++ N L+ +Y + M A+ +FS+ IK+ +S ++I G+ + G
Sbjct: 226 LKSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGFSQLG-----Y 280
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
EL EA FR++L + +P F FGS A
Sbjct: 281 EL------------------------------EALCHFREMLSQSVYQPNEFVFGSAFSA 310
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C+ + G++IH L I GL SD F G +L +MY + L +A+ F IE
Sbjct: 311 CSKLLEPDCGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIE------- 363
Query: 301 KMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSSLA 346
+P++ WNA+ FS+M L P+ TV +L ACS
Sbjct: 364 -------KPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPV 416
Query: 347 TMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRI-STPDLVSQNAML 405
+ G QVH+Y ++ G++ D+ + +L+ MY+KC +L A ++ I + D+VS N +L
Sbjct: 417 MLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLL 476
Query: 406 TAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVK 465
TA E + + + AS +PDH++ + L + S + GS+ + +
Sbjct: 477 TACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKSGLN 536
Query: 466 PSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
+ ++++ ++ G L A + I PD + W +L+ G
Sbjct: 537 LDISVSNALINMYTKCGSLECARKMFDSIG-NPDIISWSSLIVG 579
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 117/457 (25%), Positives = 204/457 (44%), Gaps = 43/457 (9%)
Query: 96 TLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKF 155
T + ++ AC+ L+ L G++ H ++ + + + N ++ +Y +CG + A +F
Sbjct: 100 TYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHILSMYGKCGSLKEARNMFDSM 159
Query: 156 SIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAF 215
+KN VS ++I GY G A L+ QM
Sbjct: 160 PLKNVVSWTSMISGYSRYGEEDNAITLYVQM----------------------------- 190
Query: 216 SMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEM 275
+R G P FTFGS++ +C+ ++ + +++HA + +D AL+ M
Sbjct: 191 -------LRSGHIPDHFTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISM 243
Query: 276 YCRYQDLVAAQMAFDEIENIENLL--GKMKEDGFEPNVYTWNAMQLFSEMLSLDL-TPDI 332
Y ++ + A F I I++L+ G M GF Y A+ F EMLS + P+
Sbjct: 244 YTKFSQMADAINVFSRII-IKDLISWGSMIA-GFSQLGYELEALCHFREMLSQSVYQPNE 301
Query: 333 YTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKR 392
+ G SACS L + G+Q+H I+ G SD+ G +L DMYAKCG L+ AR +
Sbjct: 302 FVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYH 361
Query: 393 ISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTG 452
I PDLV+ NA++ +A + KE + F ++ +G P+ ++ LS L AC + G
Sbjct: 362 IEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHG 421
Query: 453 SEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVS 512
+ + + ++ + S+ L +A + + I D V W LL C+
Sbjct: 422 IQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQ 481
Query: 513 HGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGR 549
+ G++ + ++V L N+ +G+
Sbjct: 482 QN--QAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQ 516
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 155/334 (46%), Gaps = 14/334 (4%)
Query: 209 SLYDEAFSMFRDLLMRDGIEP-TSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTF 267
+L+ EA F D+ + P S T+ ++ AC+ + SL G++IH + Q D
Sbjct: 76 NLHREALKAF-DIFQKCSSSPLKSVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMI 134
Query: 268 VGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKE-DGFEPNVYTWNAMQLFSEMLSL 326
+ ++ MY + L A+ FD + ++N++ G+ NA+ L+ +ML
Sbjct: 135 LQNHILSMYGKCGSLKEARNMFDSMP-LKNVVSWTSMISGYSRYGEEDNAITLYVQMLRS 193
Query: 327 DLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHA 386
PD +T G I+ +CS L + +Q+HA+ ++ + +D+ AL+ MY K + A
Sbjct: 194 GHIPDHFTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADA 253
Query: 387 RLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILA-SGFRPDHISFLSALSACVH 445
+ RI DL+S +M+ ++ G+ E + HFR +L+ S ++P+ F SA SAC
Sbjct: 254 INVFSRIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSK 313
Query: 446 AGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGA 505
G + L + + L + D+ ++ G L A I PD V W A
Sbjct: 314 LLEPDCGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIE-KPDLVAWNA 372
Query: 506 LLGGCVSHGNLE-----FGQIAADRLIELEPNNT 534
++ G S N + F Q+ R L PN+
Sbjct: 373 IIAGFASVSNAKESSSFFSQM---RHTGLVPNDV 403
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 110/231 (47%), Gaps = 37/231 (16%)
Query: 1 MYGKCGSLDDAKKVFKMMPER-DCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNL 59
MY KC +L+DA +VF+ + + D VSWN+++TAC E L R++ L
Sbjct: 446 MYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVL----RLTKL------- 494
Query: 60 VSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
M A ++P+ TL++VL + ++ +G + H +
Sbjct: 495 -------------------------MFASRIKPDHVTLTNVLVSSGQIASYEVGSQIHCF 529
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
I ++G + V N L+++Y +CG + A K+F + +S +++IVGY + G EA
Sbjct: 530 IMKSGLNLDISVSNALINMYTKCGSLECARKMFDSIGNPDIISWSSLIVGYAQAGCGKEA 589
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPT 230
ELF M LGV+ I++ +++ + +E ++R + I PT
Sbjct: 590 FELFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEDYRISPT 640
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 58/117 (49%), Gaps = 2/117 (1%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGSL+ A+K+F + D +SW+S++ A G EA E M L + PN +
Sbjct: 548 MYTKCGSLECARKMFDSIGNPDIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVK-PNEI 606
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEF 116
++ ++ + G EE + + MQ + + P S ++ AR L + ++F
Sbjct: 607 TFVGILTACSHIGMVEEGLKLYRTMQEDYRISPTKEHCSCMVDLLARAGCLDVAEDF 663
>gi|297739912|emb|CBI30094.3| unnamed protein product [Vitis vinifera]
Length = 614
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 197/604 (32%), Positives = 318/604 (52%), Gaps = 71/604 (11%)
Query: 7 SLDDAKKVFKMMPERD------CVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
S++D + +P +D N ++T + +G ++EA + M P+++
Sbjct: 45 SINDYRTAKISIPRKDFTVDGNVARCNWMITNLSKDGRIMEARRLFDEMRE-----PDVI 99
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+ VI G+ + G EEA + R+ A+ N T ++++ R K+S ++ +
Sbjct: 100 TWTTVISGYIKCGMIEEARRLFDRVDAK---KNVVTWTAMVGGYIRSNKISDAEKLFNEM 156
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+S N ++D Y + G + SA+ +F K +N VS NT++ + G + EAR
Sbjct: 157 PNKNVVS----WNTMIDGYAQNGRIDSAMYLFEKMPERNVVSWNTVMSMLAQCGRIEEAR 212
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LFD+M +R +ISW +MI+G L DEA +F + RD P+ T + LI
Sbjct: 213 RLFDRMP----ERDVISWTAMIAG-----LLDEALDLFERMPERD--LPSWNTMITGLIQ 261
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
D+ RK + + + T + G + E G
Sbjct: 262 NGDLRRARK--LFNEMPKKNVISWTTMITGCVQE-------------------------G 294
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLD-LTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
+ +E A+++FS MLS + P+ T +L ACS+LA + G+QVH
Sbjct: 295 ESEE-----------ALKIFSRMLSTNGAKPNQGTFVSVLGACSNLAGLGEGQQVHQIIS 343
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYK--RISTPDLVSQNAMLTAYAMHGHGKEG 417
+ Y + +AL++MY+KCG L AR + S DLVS N ++ AYA HG+GKE
Sbjct: 344 KTVYQDSTFVVSALINMYSKCGELGTARKMFDDGMTSQRDLVSWNGIIAAYAHHGYGKEA 403
Query: 418 IAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFD-LMAYYDVKPSLKHYTCMVD 476
I F+ + SGF+PD ++++ LSAC HAG ++ G ++FD L+ + HY C+VD
Sbjct: 404 INFFKEMRKSGFKPDDVTYVGLLSACSHAGLVEEGLKYFDELVKDRSILVREDHYACLVD 463
Query: 477 LLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGN 536
L RAG L EA+ FI+++ P + +WGALL GC H N++ G+ AA +L+E+EP N G
Sbjct: 464 LCGRAGRLKEAFGFIERLETKPSARVWGALLAGCNVHANVKIGKQAAKKLLEVEPENAGT 523
Query: 537 YVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEI 596
Y++L+N++A G+W + AR R KMKD+ + K PGCSWIE + +H F D+SH +S+ I
Sbjct: 524 YLLLSNIYASTGKWREAARVRLKMKDKGLKKQPGCSWIEVGNRVHVFVVGDKSHSQSKLI 583
Query: 597 YTII 600
Y+++
Sbjct: 584 YSLL 587
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 122/456 (26%), Positives = 210/456 (46%), Gaps = 54/456 (11%)
Query: 4 KCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSS------------ 51
K G + +A+++F M E D ++W +V++ G++ EA +R+ +
Sbjct: 79 KDGRIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEARRLFDRVDAKKNVVTWTAMVG 138
Query: 52 -------------LDNETP--NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNART 96
L NE P N+VSW+ +I G+ QNG + A+ LF E + T
Sbjct: 139 GYIRSNKISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAM-YLFEKMPERNVVSWNT 197
Query: 97 LSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFS 156
+ S+L C R+++ + + +S ++ GL+D AL +F +
Sbjct: 198 VMSMLAQCGRIEE---ARRLFDRMPERDVISWTAMIAGLLD---------EALDLFERMP 245
Query: 157 IKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFS 216
++ S NT+I G +NG++ AR+LF++M ++ +ISW +MI+G V +EA
Sbjct: 246 ERDLPSWNTMITGLIQNGDLRRARKLFNEMP----KKNVISWTTMITGCVQEGESEEALK 301
Query: 217 MFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMY 276
+F +L +G +P TF SVL AC+++ L +G+++H + Q TFV AL+ MY
Sbjct: 302 IFSRMLSTNGAKPNQGTFVSVLGACSNLAGLGEGQQVHQIISKTVYQDSTFVVSALINMY 361
Query: 277 CRYQDLVAAQMAFDEIENIENLLGKMKE--DGFEPNVYTWNAMQLFSEMLSLDLTPDIYT 334
+ +L A+ FD+ + L + + Y A+ F EM PD T
Sbjct: 362 SKCGELGTARKMFDDGMTSQRDLVSWNGIIAAYAHHGYGKEAINFFKEMRKSGFKPDDVT 421
Query: 335 VGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIG----TALVDMYAKCGSLKHARLAY 390
+LSACS +E G + ++ D + + LVD+ + G LK A
Sbjct: 422 YVGLLSACSHAGLVEEGLKYFDELVK---DRSILVREDHYACLVDLCGRAGRLKEAFGFI 478
Query: 391 KRIST-PDLVSQNAMLTAYAMHGHGKEGIAHFRRIL 425
+R+ T P A+L +H + K G +++L
Sbjct: 479 ERLETKPSARVWGALLAGCNVHANVKIGKQAAKKLL 514
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/251 (31%), Positives = 127/251 (50%), Gaps = 34/251 (13%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLD------- 53
M +CG +++A+++F MPERD +SW +++ GL+ EAL+ ERM D
Sbjct: 201 MLAQCGRIEEARRLFDRMPERDVISWTAMIA-----GLLDEALDLFERMPERDLPSWNTM 255
Query: 54 -----------------NETP--NLVSWSAVIGGFTQNGYDEEAIGMLFRM-QAEGLEPN 93
NE P N++SW+ +I G Q G EEA+ + RM G +PN
Sbjct: 256 ITGLIQNGDLRRARKLFNEMPKKNVISWTTMITGCVQEGESEEALKIFSRMLSTNGAKPN 315
Query: 94 ARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFS 153
T SVL AC+ L L G++ H I++ + + FVV+ L+++Y +CG++ +A K+F
Sbjct: 316 QGTFVSVLGACSNLAGLGEGQQVHQIISKTVYQDSTFVVSALINMYSKCGELGTARKMFD 375
Query: 154 K--FSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLY 211
S ++ VS N II Y +G EA F +M G + +++ ++S L
Sbjct: 376 DGMTSQRDLVSWNGIIAAYAHHGYGKEAINFFKEMRKSGFKPDDVTYVGLLSACSHAGLV 435
Query: 212 DEAFSMFRDLL 222
+E F +L+
Sbjct: 436 EEGLKYFDELV 446
>gi|302773622|ref|XP_002970228.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
gi|300161744|gb|EFJ28358.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
Length = 936
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 193/603 (32%), Positives = 307/603 (50%), Gaps = 75/603 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +C S +DA +VF M + NL+
Sbjct: 305 MYARCRSPEDAAQVFGRMKQ------------------------------------TNLI 328
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+WSA+I F +G+ EA+ MQ EG+ PN T S+L L H I
Sbjct: 329 TWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLI 388
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
T +G + N LV+VY G CE+ + +AR
Sbjct: 389 TEHGLDDTTTMRNALVNVY-----------------------------GRCESPD--DAR 417
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+FDQ+E +ISWNSMI YV +D+A +FR + + GI+P F ++L A
Sbjct: 418 TVFDQLE----LPNLISWNSMIGIYVQCERHDDALQLFRTM-QQQGIQPDRVNFMTILGA 472
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C + R K +H GL V +LV MY + +L A++ E++ +
Sbjct: 473 CTIGSHGRTRKLVHQCVEESGLGGSPLVQTSLVNMYAKAGELDVAEVILQEMDEQQITAW 532
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTP-DIYTVGIILSACSSLATMERGKQVHAYAI 359
+ +G+ + + A++ + + L L+ P D T +L+AC+S ++ GK +H+ A+
Sbjct: 533 NVLINGYALHGRSREALEAYQK-LQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAV 591
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
CG DSDV + AL +MY+KCGS+++AR + + VS N ML AYA HG +E +
Sbjct: 592 ECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLK 651
Query: 420 HFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLL 478
R++ G + + I+F+S LS+C HAG I G ++F + + ++ +HY C+VDLL
Sbjct: 652 LIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLL 711
Query: 479 SRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYV 538
RAG+L EA ++I K+P+ P V W +LLG C +L+ G++AA +L+EL+P N+ V
Sbjct: 712 GRAGKLQEAEKYISKMPLEPGIVTWASLLGACRVQKDLDRGKLAAGKLLELDPGNSSASV 771
Query: 539 MLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYT 598
+L+N+++ G W + A+ R+ M RR+ K PG S I+ ++++H+FR D SH R+ EIY
Sbjct: 772 VLSNIYSERGDWKNAAKLRRAMASRRVKKVPGISSIQVKNKVHEFRVRDTSHPRAAEIYD 831
Query: 599 IID 601
++
Sbjct: 832 KVE 834
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 128/523 (24%), Positives = 220/523 (42%), Gaps = 102/523 (19%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +CGSL DA F + R N+V
Sbjct: 1 MYSRCGSLGDAVAAFGKIRAR------------------------------------NVV 24
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ +I ++ +EA+ + M EG+ PNA TL +VL +C ++L G H
Sbjct: 25 SWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAITLVAVLNSCGSFRELRDGILVHALS 84
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
GF N V L+++Y +CG +L A +F + + KN
Sbjct: 85 LERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMAEKN--------------------- 123
Query: 181 ELFDQMEHLGVQRGIISWNSMISGY-VDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
+++WN+M+ Y + + A +F +L+ +G++ TF +VL
Sbjct: 124 --------------VVTWNAMLGVYSLQGCCWKLAVELFTRMLL-EGVKANVITFLNVLN 168
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
+ D ++LRKGK IH+ D FV ALV Y + L A+ FD +
Sbjct: 169 SVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPC----- 223
Query: 300 GKMKEDGFEPNVYTWNAMQ--------------LFSEMLSLDLTPDIYTVGIILSACSSL 345
+V TWN+M +F M D T IL AC +
Sbjct: 224 ---------RSVGTWNSMISAYSISERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNP 274
Query: 346 ATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAML 405
T++ GK V ++ D+ +GTAL+ MYA+C S + A + R+ +L++ +A++
Sbjct: 275 ETLQHGKHVRESISETSFELDLFVGTALITMYARCRSPEDAAQVFGRMKQTNLITWSAII 334
Query: 406 TAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVK 465
TA+A HGH E + +FR + G P+ ++F+S L+ ++ S L+ + +
Sbjct: 335 TAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLD 394
Query: 466 PSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLG 508
+ +V++ R +A ++ + P+ + W +++G
Sbjct: 395 DTTTMRNALVNVYGRCESPDDARTVFDQLEL-PNLISWNSMIG 436
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 125/515 (24%), Positives = 217/515 (42%), Gaps = 74/515 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKCG+L DA+ VF+ M E+ N+V
Sbjct: 102 MYGKCGTLLDAQSVFEEMAEK------------------------------------NVV 125
Query: 61 SWSAVIGGFTQNGYDEE-AIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
+W+A++G ++ G + A+ + RM EG++ N T +VL + L GK H
Sbjct: 126 TWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSC 185
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ + + FV LV+ Y +CG + +A
Sbjct: 186 VRESEHSLDVFVNTALVNTYTKCGSL-------------------------------TDA 214
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
R++FD M R + +WNSMIS Y + EAF +F+ + ++G TF S+L
Sbjct: 215 RKVFDGMP----CRSVGTWNSMISAYSISERSGEAFFIFQRM-QQEGERCDRVTFLSILD 269
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
AC + +L+ GK + + D FVG AL+ MY R + A F ++ +
Sbjct: 270 ACVNPETLQHGKHVRESISETSFELDLFVGTALITMYARCRSPEDAAQVFGRMKQTNLIT 329
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
F + + A++ F M + P+ T +L+ ++ + +E ++H
Sbjct: 330 WSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLIT 389
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
G D + ALV++Y +C S AR + ++ P+L+S N+M+ Y + +
Sbjct: 390 EHGLDDTTTMRNALVNVYGRCESPDDARTVFDQLELPNLISWNSMIGIYVQCERHDDALQ 449
Query: 420 HFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLS 479
FR + G +PD ++F++ L AC +T + + S T +V++ +
Sbjct: 450 LFRTMQQQGIQPDRVNFMTILGACTIGSHGRTRKLVHQCVEESGLGGSPLVQTSLVNMYA 509
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
+AGEL A ++++ W L+ G HG
Sbjct: 510 KAGELDVAEVILQEMD-EQQITAWNVLINGYALHG 543
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 97/361 (26%), Positives = 172/361 (47%), Gaps = 35/361 (9%)
Query: 170 YCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEP 229
Y G++ +A F ++ R ++SWN MIS Y + EA ++F +L+ +G+ P
Sbjct: 2 YSRCGSLGDAVAAFGKIR----ARNVVSWNVMISAYSSYKSFQEALALFHAMLL-EGVAP 56
Query: 230 TSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAF 289
+ T +VL +C LR G +HAL++ G +T V AL+ MY + L+ AQ F
Sbjct: 57 NAITLVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVF 116
Query: 290 DEIENIENLLGKMKEDGFEPNVYTWNAM---------------QLFSEMLSLDLTPDIYT 334
+E+ E NV TWNAM +LF+ ML + ++ T
Sbjct: 117 EEMA--------------EKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVIT 162
Query: 335 VGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS 394
+L++ + +GK +H+ + DV + TALV+ Y KCGSL AR + +
Sbjct: 163 FLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMP 222
Query: 395 TPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSE 454
+ + N+M++AY++ E F+R+ G R D ++FLS L ACV+ +++ G
Sbjct: 223 CRSVGTWNSMISAYSISERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKH 282
Query: 455 FFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
+ ++ + L T ++ + +R +A + ++ + + W A++ HG
Sbjct: 283 VRESISETSFELDLFVGTALITMYARCRSPEDAAQVFGRMKQT-NLITWSAIITAFADHG 341
Query: 515 N 515
+
Sbjct: 342 H 342
>gi|356536685|ref|XP_003536866.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71490-like [Glycine max]
Length = 723
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 186/580 (32%), Positives = 294/580 (50%), Gaps = 37/580 (6%)
Query: 38 LVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTL 97
L+++A E ++LD + W+ +I + +NG+ EA+ + M + +EP+ T
Sbjct: 131 LLVDAQFVTESSNTLDP-----LHWNLLISAYVRNGFFVEALCVYKNMLNKKIEPDEYTY 185
Query: 98 SSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSI 157
SVL AC + G E H I + + FV N LV +Y R G + A +F
Sbjct: 186 PSVLKACGESLDFNSGLEVHRSIEASSMEWSLFVHNALVSMYGRFGKLEIARHLFDNMPR 245
Query: 158 KNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSM 217
++ VS NTII Y G EA +LF M+ GV+ +I WN++ G + + + A +
Sbjct: 246 RDSVSWNTIISCYASRGIWKEAFQLFGSMQEEGVEMNVIIWNTIAGGCLHSGNFRGALQL 305
Query: 218 FRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYC 277
MR I + L AC+ + +++ GKEIH A+ V AL+ MY
Sbjct: 306 ISQ--MRTSIHLDAIAMVVGLNACSHIGAIKLGKEIHGHAVRTCFDVFDNVKNALITMYS 363
Query: 278 RYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQ--------------LFSEM 323
R +DL A + F E E + TWNAM LF EM
Sbjct: 364 RCRDLGHAFILFHRTE--------------EKGLITWNAMLSGYAHMDRYEEVTFLFREM 409
Query: 324 LSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCG-YDSDVHIGTALVDMYAKCGS 382
L + P+ T+ +L C+ +A ++ GK+ H Y ++ ++ + + ALVDMY++ G
Sbjct: 410 LQEGMEPNYVTIASVLPLCARIANLQHGKEFHCYIMKHKQFEEYLLLWNALVDMYSRSGR 469
Query: 383 LKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSA 442
+ AR + ++ D V+ +M+ Y M G G+ + F + +PDH++ ++ L+A
Sbjct: 470 VLEARKVFDSLTKRDEVTYTSMILGYGMKGEGETTLKLFEEMCKLEIKPDHVTMVAVLTA 529
Query: 443 CVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSV 501
C H+G + G F M + + P L+HY CM DL RAG L +A EFI +P P S
Sbjct: 530 CSHSGLVAQGQVLFKRMIDVHGIVPRLEHYACMADLFGRAGLLNKAKEFITGMPYKPTSA 589
Query: 502 MWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMK 561
MW LLG C HGN E G+ AA +L+E++P+++G YV++AN++A AG W LA R M+
Sbjct: 590 MWATLLGACRIHGNTEMGEWAAGKLLEMKPDHSGYYVLIANMYAAAGSWRKLAEVRTYMR 649
Query: 562 DRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
+ + K+PGC+W++ E F D S+ + EIY ++D
Sbjct: 650 NLGVRKAPGCAWVDVGSEFSPFLVGDSSNPHASEIYPLMD 689
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 141/560 (25%), Positives = 234/560 (41%), Gaps = 113/560 (20%)
Query: 64 AVIGGFTQNGYDEEAIGMLFRMQAEGLEPNA--RTLSSVLPACARLQKLSLGKEFHGYIT 121
A + F +G+ A F++Q + + S+L AC + LS GK+ H +
Sbjct: 49 ASLKDFVTHGHLTNAFKTFFQIQHHAASSHLLLHPIGSLLLACTHFKSLSQGKQLHAQVI 108
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
G NP +V+ LV+ Y ++ A + + + + N +I Y NG
Sbjct: 109 SLGLDQNPILVSRLVNFYTNVNLLVDAQFVTESSNTLDPLHWNLLISAYVRNG------- 161
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
+ EA +++++L + IEP +T+ SVL AC
Sbjct: 162 ----------------------------FFVEALCVYKNMLNKK-IEPDEYTYPSVLKAC 192
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN---- 297
+ G E+H A ++ FV ALV MY R+ L A+ FD + ++
Sbjct: 193 GESLDFNSGLEVHRSIEASSMEWSLFVHNALVSMYGRFGKLEIARHLFDNMPRRDSVSWN 252
Query: 298 -----------------LLGKMKEDGFEPNVYTWN--------------AMQLFSEM-LS 325
L G M+E+G E NV WN A+QL S+M S
Sbjct: 253 TIISCYASRGIWKEAFQLFGSMQEEGVEMNVIIWNTIAGGCLHSGNFRGALQLISQMRTS 312
Query: 326 LDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKH 385
+ L VG L+ACS + ++ GK++H +A+R +D ++ AL+ MY++C L H
Sbjct: 313 IHLDAIAMVVG--LNACSHIGAIKLGKEIHGHAVRTCFDVFDNVKNALITMYSRCRDLGH 370
Query: 386 ARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVH 445
A + + R L++ NAML+ YA +E FR +L G P++++ S L C
Sbjct: 371 AFILFHRTEEKGLITWNAMLSGYAHMDRYEEVTFLFREMLQEGMEPNYVTIASVLPLCAR 430
Query: 446 AGSIKTGSEFF-DLMAYYDVKPSLKHYTCMVDLLSRAGELGEA----------------- 487
+++ G EF +M + + L + +VD+ SR+G + EA
Sbjct: 431 IANLQHGKEFHCYIMKHKQFEEYLLLWNALVDMYSRSGRVLEARKVFDSLTKRDEVTYTS 490
Query: 488 -----------------YEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELE 530
+E + K+ + PD V A+L C G + GQ+ R+I++
Sbjct: 491 MILGYGMKGEGETTLKLFEEMCKLEIKPDHVTMVAVLTACSHSGLVAQGQVLFKRMIDVH 550
Query: 531 --PNNTGNYVMLANLFAYAG 548
+Y +A+LF AG
Sbjct: 551 GIVPRLEHYACMADLFGRAG 570
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 114/440 (25%), Positives = 199/440 (45%), Gaps = 51/440 (11%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYG+ G L+ A+ +F MP RD VSWN++++ A+ G+ EA + M E N++
Sbjct: 226 MYGRFGKLEIARHLFDNMPRRDSVSWNTIISCYASRGIWKEAFQLFGSMQEEGVEM-NVI 284
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
W+ + GG +G A+ ++ +M+ + +A + L AC+ + + LGKE HG+
Sbjct: 285 IWNTIAGGCLHSGNFRGALQLISQMRT-SIHLDAIAMVVGLNACSHIGAIKLGKEIHGHA 343
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R F V N L+ +Y RC D+ A +F + K ++ N ++ GY
Sbjct: 344 VRTCFDVFDNVKNALITMYSRCRDLGHAFILFHRTEEKGLITWNAMLSGY---------- 393
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
++D Y+E +FR++L ++G+EP T SVL
Sbjct: 394 -----------------------AHMDR--YEEVTFLFREML-QEGMEPNYVTIASVLPL 427
Query: 241 CADMNSLRKGKEIHALAIA-LGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
CA + +L+ GKE H + + + ALV+MY R ++ A+ FD + + +
Sbjct: 428 CARIANLQHGKEFHCYIMKHKQFEEYLLLWNALVDMYSRSGRVLEARKVFDSLTKRDEVT 487
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
G+ ++LF EM L++ PD T+ +L+ACS + +G+ + I
Sbjct: 488 YTSMILGYGMKGEGETTLKLFEEMCKLEIKPDHVTMVAVLTACSHSGLVAQGQVLFKRMI 547
Query: 360 RC-GYDSDVHIGTALVDMYAKCGSLKHAR-----LAYKRISTPDLVSQNAMLTAYAMHGH 413
G + + D++ + G L A+ + YK P +L A +HG+
Sbjct: 548 DVHGIVPRLEHYACMADLFGRAGLLNKAKEFITGMPYK----PTSAMWATLLGACRIHGN 603
Query: 414 GKEGIAHFRRILASGFRPDH 433
+ G ++L +PDH
Sbjct: 604 TEMGEWAAGKLLE--MKPDH 621
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 150/362 (41%), Gaps = 45/362 (12%)
Query: 235 GSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIEN 294
GS+L+AC SL +GK++HA I+LGL + + LV Y LV AQ +
Sbjct: 85 GSLLLACTHFKSLSQGKQLHAQVISLGLDQNPILVSRLVNFYTNVNLLVDAQFVTESSNT 144
Query: 295 IENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV 354
++ L + + N + A+ ++ ML+ + PD YT +L AC G +V
Sbjct: 145 LDPLHWNLLISAYVRNGFFVEALCVYKNMLNKKIEPDEYTYPSVLKACGESLDFNSGLEV 204
Query: 355 HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHG 414
H + + + ALV MY + G L+ AR + + D VS N +++ YA G
Sbjct: 205 HRSIEASSMEWSLFVHNALVSMYGRFGKLEIARHLFDNMPRRDSVSWNTIISCYASRGIW 264
Query: 415 KEGIAHFRRILASG--------------------FRP--------------DHISFLSAL 440
KE F + G FR D I+ + L
Sbjct: 265 KEAFQLFGSMQEEGVEMNVIIWNTIAGGCLHSGNFRGALQLISQMRTSIHLDAIAMVVGL 324
Query: 441 SACVHAGSIKTGSEFFD--LMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAP 498
+AC H G+IK G E + +DV ++K ++ + SR +LG A+ +
Sbjct: 325 NACSHIGAIKLGKEIHGHAVRTCFDVFDNVK--NALITMYSRCRDLGHAFILFHRTE-EK 381
Query: 499 DSVMWGALLGGCVSHGNLEFGQIAADRLIE--LEPNNTGNYVMLANLFAYAGRWSDLART 556
+ W A+L G E +++ +EP NYV +A++ R ++L
Sbjct: 382 GLITWNAMLSGYAHMDRYEEVTFLFREMLQEGMEP----NYVTIASVLPLCARIANLQHG 437
Query: 557 RQ 558
++
Sbjct: 438 KE 439
>gi|357130409|ref|XP_003566841.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 815
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 176/549 (32%), Positives = 293/549 (53%), Gaps = 40/549 (7%)
Query: 40 LEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSS 99
L A E E +D P++V SA+I F ++ EA+ + +M G++PN
Sbjct: 301 LSAEEAYEVFIRIDE--PDVVHCSAMISCFDRHDMAWEALDLFVKMSGMGVKPNHYIFVG 358
Query: 100 VLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKN 159
+ +R +L + H YI ++GF ++ G+ D
Sbjct: 359 IAGVASRTGDANLCRSVHAYIVKSGFA----MLKGVGD---------------------- 392
Query: 160 EVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFR 219
I+ Y + G V +A FD + + SWN+++S + S ++ +F+
Sbjct: 393 -----AILNMYVKVGAVQDATVTFDLIH----EPDTFSWNTILSAFYSGSNCEQGLRIFK 443
Query: 220 DLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRY 279
+ +G +T+ SVL C + +LR G ++HA + GLQ+DT V LV+MY +
Sbjct: 444 QMAC-EGFSANKYTYVSVLRCCTSLMNLRFGTQVHACILKSGLQNDTDVSRMLVDMYAQS 502
Query: 280 QDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIIL 339
+A + F++++ + + G+ ++ F ML ++ P T+ + L
Sbjct: 503 GCFTSACLVFEQLKERDAFSWTVIMSGYAKTEEAEKVVEYFRSMLRENIRPSDATLAVSL 562
Query: 340 SACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLV 399
S CS +A++ G Q+H++AI+ G++S V + ALVDMY KCG++ A + + T D V
Sbjct: 563 SVCSDMASLGSGLQLHSWAIKSGWNSSV-VSGALVDMYVKCGNIADAEMLFHESETRDQV 621
Query: 400 SQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFF-DL 458
+ N ++ Y+ HGHG + + F++++ G RPD I+F+ LSAC HAG + G ++F L
Sbjct: 622 AWNTIICGYSQHGHGYKALDAFKQMVDEGKRPDGITFVGVLSACSHAGLLNEGRKYFKSL 681
Query: 459 MAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEF 518
+ Y + P+++HY CMVD+LS+AG L EA I ++P+APDS +W +LG C H N+E
Sbjct: 682 SSIYGITPTMEHYACMVDILSKAGRLVEAESLINQMPLAPDSSIWRTILGACRIHRNIEI 741
Query: 519 GQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRD 578
+ AA+RL ELEP++ + ++L+N++A GRWSD+ R R + D + K PGCSWIE
Sbjct: 742 AERAAERLFELEPHDASSSILLSNIYADLGRWSDVTRVRNILLDHGVKKEPGCSWIEING 801
Query: 579 EIHKFRASD 587
+IH F + D
Sbjct: 802 QIHMFLSQD 810
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 122/509 (23%), Positives = 223/509 (43%), Gaps = 73/509 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG L DA++VF MP RD +V
Sbjct: 94 MYCKCGRLVDARRVFDGMPHRD------------------------------------IV 117
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+A+I T G ++A+ M RM EG+ PN TL+SVL AC+ + HG +
Sbjct: 118 AWTAMISAHTAAGDSDQALDMFARMNQEGIAPNGFTLASVLKACSGGSHSKFTHQVHGQV 177
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ + +P+V + LV+ Y CG++ +A T+++G E +V
Sbjct: 178 VKLNGLDDPYVGSSLVEAYTSCGELDAA---------------ETVLLGLPERSDV---- 218
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
SWN++++GY + Y + L+ G E + +T +VL
Sbjct: 219 ----------------SWNALLNGYARHGDYRRVMIIIEKLVA-SGDEISKYTLPTVLKC 261
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C ++ + G+ +HA I GL++D + LVEMY R A F I+ + +
Sbjct: 262 CMELGLAKYGQSVHASVIKRGLETDNVLNSCLVEMYSRCLSAEEAYEVFIRIDEPDVVHC 321
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
F+ + W A+ LF +M + + P+ Y I S + VHAY ++
Sbjct: 322 SAMISCFDRHDMAWEALDLFVKMSGMGVKPNHYIFVGIAGVASRTGDANLCRSVHAYIVK 381
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
G+ +G A+++MY K G+++ A + + I PD S N +L+A+ + ++G+
Sbjct: 382 SGFAMLKGVGDAILNMYVKVGAVQDATVTFDLIHEPDTFSWNTILSAFYSGSNCEQGLRI 441
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSR 480
F+++ GF + +++S L C +++ G++ + ++ +VD+ ++
Sbjct: 442 FKQMACEGFSANKYTYVSVLRCCTSLMNLRFGTQVHACILKSGLQNDTDVSRMLVDMYAQ 501
Query: 481 AGELGEAYEFIKKIPMAPDSVMWGALLGG 509
+G A +++ D+ W ++ G
Sbjct: 502 SGCFTSACLVFEQLK-ERDAFSWTVIMSG 529
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 115/504 (22%), Positives = 216/504 (42%), Gaps = 71/504 (14%)
Query: 95 RTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSK 154
R ++ L CA + L G+E H + R+ + F+++ L+++Y +CG ++
Sbjct: 51 RLHAAALQDCAVRRTLRRGQELHARLLRSALHPDTFLLDSLLNMYCKCGRLV-------- 102
Query: 155 FSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEA 214
+AR +FD M H R I++W +MIS + D+A
Sbjct: 103 -----------------------DARRVFDGMPH----RDIVAWTAMISAHTAAGDSDQA 135
Query: 215 FSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVE 274
MF + ++GI P FT SVL AC+ + + ++H + L D +VG +LVE
Sbjct: 136 LDMFAR-MNQEGIAPNGFTLASVLKACSGGSHSKFTHQVHGQVVKLNGLDDPYVGSSLVE 194
Query: 275 MYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYT 334
Y +L AA+ + ++ +G+ + M + ++++ YT
Sbjct: 195 AYTSCGELDAAETVLLGLPERSDVSWNALLNGYARHGDYRRVMIIIEKLVASGDEISKYT 254
Query: 335 VGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS 394
+ +L C L + G+ VHA I+ G ++D + + LV+MY++C S + A + RI
Sbjct: 255 LPTVLKCCMELGLAKYGQSVHASVIKRGLETDNVLNSCLVEMYSRCLSAEEAYEVFIRID 314
Query: 395 TPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFL-----------SALSAC 443
PD+V +AM++ + H E + F ++ G +P+H F+ + L
Sbjct: 315 EPDVVHCSAMISCFDRHDMAWEALDLFVKMSGMGVKPNHYIFVGIAGVASRTGDANLCRS 374
Query: 444 VHAGSIKTGSEFF------------------DLMAYYDV--KPSLKHYTCMVDLLSRAGE 483
VHA +K+G D +D+ +P + ++
Sbjct: 375 VHAYIVKSGFAMLKGVGDAILNMYVKVGAVQDATVTFDLIHEPDTFSWNTILSAFYSGSN 434
Query: 484 LGEAYEFIKKIP---MAPDSVMWGALLGGCVSHGNLEFG-QIAADRLIELEPNNTGNYVM 539
+ K++ + + + ++L C S NL FG Q+ A L N+T M
Sbjct: 435 CEQGLRIFKQMACEGFSANKYTYVSVLRCCTSLMNLRFGTQVHACILKSGLQNDTDVSRM 494
Query: 540 LANLFAYAGRWSDLARTRQKMKDR 563
L +++A +G ++ +++K+R
Sbjct: 495 LVDMYAQSGCFTSACLVFEQLKER 518
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 81/170 (47%), Gaps = 7/170 (4%)
Query: 26 WNSVVTACAANGLVLEALECLE-RMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFR 84
WNS V + A + ++ + M ++ET + V+W+ +I G++Q+G+ +A+ +
Sbjct: 586 WNSSVVSGALVDMYVKCGNIADAEMLFHESETRDQVAWNTIICGYSQHGHGYKALDAFKQ 645
Query: 85 MQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITR-NGFMSNPFVVNGLVDVYRRCG 143
M EG P+ T VL AC+ L+ G+++ ++ G +VD+ + G
Sbjct: 646 MVDEGKRPDGITFVGVLSACSHAGLLNEGRKYFKSLSSIYGITPTMEHYACMVDILSKAG 705
Query: 144 DMLSALKIFSKFSIKNEVSCNTIIVGYC---ENGNVAE--ARELFDQMEH 188
++ A + ++ + + S I+G C N +AE A LF+ H
Sbjct: 706 RLVEAESLINQMPLAPDSSIWRTILGACRIHRNIEIAERAAERLFELEPH 755
>gi|359485832|ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1736
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 193/575 (33%), Positives = 297/575 (51%), Gaps = 44/575 (7%)
Query: 27 NSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQ 86
N +V A +G + +A E M D+ VSW+++I G QN E+A RM+
Sbjct: 426 NGLVNMYAKSGAIADACSVFELMVEKDS-----VSWNSLISGLDQNECSEDAAESFHRMR 480
Query: 87 AEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDML 146
G P+ TL S L +CA L + LG++ H + G ++ V N L+ +Y G
Sbjct: 481 RTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFT 540
Query: 147 SALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYV 206
LK+FS +DQ +SWNS+I
Sbjct: 541 ECLKVFSLMP-------------------------EYDQ----------VSWNSVIGALS 565
Query: 207 DNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDT 266
D+ + +MR G + TF ++L A + ++ +IHAL + L DT
Sbjct: 566 DSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDT 625
Query: 267 FVGGALVEMYCRYQDLVAAQMAFDEI-ENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLS 325
+G AL+ Y + ++ + F + E + + G+ N AM L M+
Sbjct: 626 AIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQ 685
Query: 326 LDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKH 385
D +T ILSAC+S+AT+ERG +VHA IR +SDV +G+ALVDMY+KCG + +
Sbjct: 686 KGQRLDSFTFATILSACASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDY 745
Query: 386 ARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVH 445
A ++ + ++ S N+M++ YA HGHG++ + F R++ G PDH++F+ LSAC H
Sbjct: 746 ASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSH 805
Query: 446 AGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWG 504
G ++ G E F M+ Y + P ++H++CMVDLL RAG+L E +FI +PM P+ ++W
Sbjct: 806 VGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWR 865
Query: 505 ALLGGCVSHG--NLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKD 562
+LG C N E G+ AA+ L+ELEP N NYV+LAN++A +W D+A+ R MK+
Sbjct: 866 TVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLANMYASGEKWEDVAKARTAMKE 925
Query: 563 RRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
+ K GCSW+ +D +H F A D+ H + IY
Sbjct: 926 AAVKKEAGCSWVTMKDGVHVFVAGDKLHPEKDLIY 960
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 124/539 (23%), Positives = 222/539 (41%), Gaps = 91/539 (16%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACAR--LQKLSLGKE 115
NLV+W+ +I G+TQNG +EA M G PN S L AC LG +
Sbjct: 136 NLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQ 195
Query: 116 FHGYITRNGFMSNPFVVN--------------------------------GLVDVYRRCG 143
HG I++ + S+ V N ++ VY R G
Sbjct: 196 IHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRG 255
Query: 144 DMLSALKIFSK-------FSIK-NEVSCNTIIVGYCEN---------------------- 173
D +SA +FS FS K NE + ++I C +
Sbjct: 256 DAVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITTACSSVDFGLCVLEQMLARVEKSGFLQ 315
Query: 174 ---------------GNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMF 218
G +A+ +F+QM GV R ++S N ++ G V + A +F
Sbjct: 316 DLYVSSALVSGFARFGLTDDAKNIFEQM---GV-RNVVSMNGLMVGLVKQKQGEAAAKVF 371
Query: 219 RDLLMRDGIEPTSFTFGSVLIACADMNSL----RKGKEIHALAIALGLQSDTF-VGGALV 273
+ M+D + S ++ +L A ++ + L RKG+E+HA I GL + +G LV
Sbjct: 372 HE--MKDLVGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLV 429
Query: 274 EMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIY 333
MY + + A F+ + +++ G + N + +A + F M P +
Sbjct: 430 NMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFHRMRRTGSMPSNF 489
Query: 334 TVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRI 393
T+ LS+C+SL + G+Q+H ++ G D+DV + AL+ +YA+ G + +
Sbjct: 490 TLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLM 549
Query: 394 STPDLVSQNAMLTAYA-MHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTG 452
D VS N+++ A + + + +F +++ G+ ++F++ LSA +
Sbjct: 550 PEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVS 609
Query: 453 SEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCV 511
+ L+ Y + ++ + GE+ E + ++ D V W +++ G +
Sbjct: 610 HQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYI 668
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 141/603 (23%), Positives = 248/603 (41%), Gaps = 131/603 (21%)
Query: 1 MYGKC-GSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNE---- 55
MYG C S +DA+ VF + R+ +SWNS+++ + G +A+ + SS+ E
Sbjct: 218 MYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRG---DAVSAYDLFSSMQKEGLGF 274
Query: 56 --TPNLVSW-------------------------------------SAVIGGFTQNGYDE 76
PN ++ SA++ GF + G +
Sbjct: 275 SFKPNEYTFGSLITTACSSVDFGLCVLEQMLARVEKSGFLQDLYVSSALVSGFARFGLTD 334
Query: 77 EA-------------------IGMLFRMQAEGLEP-----------NARTLSSVLPACAR 106
+A +G++ + Q E N+ + +L A +
Sbjct: 335 DAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGINSDSYVVLLSAFSE 394
Query: 107 LQKLS----LGKEFHGYITRNGFMSNPFVV-NGLVDVYRRCGDMLSALKIFSKFSIKNEV 161
L G+E H ++ R G N + NGLV++Y + G + A +F K+ V
Sbjct: 395 FSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSV 454
Query: 162 SCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDL 221
S N++I G +N +A E F +M G SM
Sbjct: 455 SWNSLISGLDQNECSEDAAESFHRMRRTG---------SM-------------------- 485
Query: 222 LMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMY----C 277
P++FT S L +CA + + G++IH + LGL +D V AL+ +Y C
Sbjct: 486 -------PSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGC 538
Query: 278 RYQDLVAAQM--AFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTV 335
+ L + +D++ + +++G + + E +V A++ F +M+ T
Sbjct: 539 FTECLKVFSLMPEYDQV-SWNSVIGALSDS--EASVS--QAVKYFLQMMRGGWGLSRVTF 593
Query: 336 GIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS- 394
ILSA SSL+ E Q+HA ++ D IG AL+ Y KCG + + R+S
Sbjct: 594 INILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSE 653
Query: 395 TPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSE 454
T D VS N+M++ Y + + + ++ G R D +F + LSAC +++ G E
Sbjct: 654 TRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGME 713
Query: 455 FFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
++ + + +VD+ S+ G + A F + +P+ + W +++ G HG
Sbjct: 714 VHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMPLR-NVYSWNSMISGYARHG 772
Query: 515 NLE 517
+ E
Sbjct: 773 HGE 775
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 108/423 (25%), Positives = 181/423 (42%), Gaps = 76/423 (17%)
Query: 113 GKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCE 172
+E H + GF+ N F+ N L+++Y R GD+ SA K+F + S +N V+ +I GY +
Sbjct: 90 ARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQ 149
Query: 173 NGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSF 232
NG DEA + FRD++ R G P +
Sbjct: 150 NGKP-----------------------------------DEACARFRDMV-RAGFIPNHY 173
Query: 233 TFGSVLIACADM--NSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVA-AQMAF 289
FGS L AC + + + G +IH L SD V L+ MY D A+ F
Sbjct: 174 AFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVF 233
Query: 290 DEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEM----LSLDLTPDIYTVG-IILSACSS 344
D I ++ + +A LFS M L P+ YT G +I +ACSS
Sbjct: 234 DGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITTACSS 293
Query: 345 ----LATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVS 400
L +E Q+ A + G+ D+++ +ALV +A+ G A+ ++++ ++VS
Sbjct: 294 VDFGLCVLE---QMLARVEKSGFLQDLYVSSALVSGFARFGLTDDAKNIFEQMGVRNVVS 350
Query: 401 QNAMLTAYAMHGHGKEG--IAHFRRILASGFRPDHISFLSALSAC------------VHA 446
N ++ G+ + H + L ++ LSA S VHA
Sbjct: 351 MNGLMVGLVKQKQGEAAAKVFHEMKDLVGINSDSYVVLLSAFSEFSVLEEGRRKGREVHA 410
Query: 447 GSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGAL 506
I+TG D K ++ + +V++ +++G + +A + ++ + DSV W +L
Sbjct: 411 HVIRTGLN--------DNKVAIGN--GLVNMYAKSGAIADACS-VFELMVEKDSVSWNSL 459
Query: 507 LGG 509
+ G
Sbjct: 460 ISG 462
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 136/327 (41%), Gaps = 73/327 (22%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
YGKCG +++ +K+F M +ET + VS
Sbjct: 635 YGKCGEMNECEKIFARM-----------------------------------SETRDEVS 659
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W+++I G+ N +A+ +++ M +G ++ T +++L ACA + L G E H
Sbjct: 660 WNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHACGI 719
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
R S+ V + LVD+Y +CG + A + F ++N S N++I GY +G+ +A +
Sbjct: 720 RACLESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALK 779
Query: 182 LFDQM-------------------EHLG-VQRGIISWNSMISGYVDNSLYDEAFSMFRDL 221
LF +M H+G V+ G + SM Y S E FS DL
Sbjct: 780 LFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEGFEHFKSMSEVY-RLSPRVEHFSCMVDL 838
Query: 222 LMRDG-------------IEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFV 268
L R G ++P + +VL AC N A + L L+ V
Sbjct: 839 LGRAGKLDEVGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAV 898
Query: 269 GGALV-EMYC---RYQDLVAAQMAFDE 291
L+ MY +++D+ A+ A E
Sbjct: 899 NYVLLANMYASGEKWEDVAKARTAMKE 925
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 138/330 (41%), Gaps = 19/330 (5%)
Query: 249 KGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFE 308
+ +E+H +I G + F+ L+ +Y R DL +AQ FDE+ N + G+
Sbjct: 89 EARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYT 148
Query: 309 PNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSAC--SSLATMERGKQVHAYAIRCGYDSD 366
N A F +M+ P+ Y G L AC S + + G Q+H + Y SD
Sbjct: 149 QNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSD 208
Query: 367 VHIGTALVDMYAKC-GSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRIL 425
V + L+ MY C S AR + I + +S N++++ Y+ G F +
Sbjct: 209 VVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQ 268
Query: 426 ASG----FRPDHISFLSAL-SACVHAGSIKTGSEFFDLMAYYDVKP----SLKHYTCMVD 476
G F+P+ +F S + +AC S+ G + M K L + +V
Sbjct: 269 KEGLGFSFKPNEYTFGSLITTAC---SSVDFGLCVLEQMLARVEKSGFLQDLYVSSALVS 325
Query: 477 LLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGN 536
+R G +A +++ + + V L+ G V E + +L N+ +
Sbjct: 326 GFARFGLTDDAKNIFEQMGVR-NVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGINSDS 384
Query: 537 YVMLANLFAYAGRWSDLARTRQKMKDRRMH 566
YV+L + F+ +S L R+K ++ H
Sbjct: 385 YVVLLSAFS---EFSVLEEGRRKGREVHAH 411
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 57/99 (57%)
Query: 349 ERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAY 408
E +++H +I+ G+ ++ + L+++Y + G L A+ + +S +LV+ +++ Y
Sbjct: 88 EEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGY 147
Query: 409 AMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAG 447
+G E A FR ++ +GF P+H +F SAL AC +G
Sbjct: 148 TQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESG 186
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 57/111 (51%), Gaps = 2/111 (1%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG +D A + F++MP R+ SWNS+++ A +G +AL+ RM LD + P+ V
Sbjct: 736 MYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRM-MLDGQPPDHV 794
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRM-QAEGLEPNARTLSSVLPACARLQKL 110
++ V+ + G+ EE M + L P S ++ R KL
Sbjct: 795 TFVGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKL 845
>gi|449442815|ref|XP_004139176.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g05340-like [Cucumis sativus]
Length = 838
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 175/566 (30%), Positives = 305/566 (53%), Gaps = 30/566 (5%)
Query: 52 LDNETPNLVSW-----SAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACAR 106
+ +L SW S F QN + E + + L+P S +L C R
Sbjct: 7 FQKRSSHLPSWVTSLISPFRNQFHQNPFPETSSTFVLNH----LDP-----SFLLSICGR 57
Query: 107 LQKLSLGKEFHGYITRNGFMSNPF----VVNGLVDVYRRCGDMLSALKIFSKFSIKNEVS 162
L LG H I ++ +SN + ++N L+ +Y RCG + A+K+F + ++ +S
Sbjct: 58 EGNLHLGSSLHASIIKSFELSNHYNGVVIMNSLISMYDRCGKLPDAVKVFDEMITRDTIS 117
Query: 163 CNTIIVGYCENGN-------VAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAF 215
N +I G+ NGN V ++F +M +R +I+W ++ISG N ++ +
Sbjct: 118 WNALIGGFVRNGNSYFKCGCVGLGMQVFYEMG----ERNVITWTAVISGLAQNGYHEHSL 173
Query: 216 SMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEM 275
+F++++ +EP S T+ S+L AC+ + +L++G +IH L + LG+QSD +G AL++M
Sbjct: 174 KLFKEMMSYGSVEPNSLTYLSLLTACSGLEALKEGCQIHGLIMKLGIQSDLCIGSALMDM 233
Query: 276 YCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTV 335
Y + + A F+ E ++ + + GF N A+Q+F +ML + + D V
Sbjct: 234 YSKSGRIGEAWKIFELAEELDMVSLTVILAGFTHNGCEEEAIQIFLKMLKMGIEIDGNVV 293
Query: 336 GIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST 395
++L + ++ G+QVH++ ++ + + + L++MY+KCG+L + + R+
Sbjct: 294 SVVLGVFGADTSLRLGQQVHSFVVKKNFICNPFVSNGLINMYSKCGALDESMKVFDRMRE 353
Query: 396 PDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEF 455
+ V+ N+M+ A+A HG + + + + G +P ++FLS L AC HAG +K G EF
Sbjct: 354 RNSVTWNSMIAAFARHGDALKALQLYEDMQLEGAKPTDVTFLSLLHACSHAGLVKKGMEF 413
Query: 456 FDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
M + + P +H+ C+VD+L RAG L EA FI+K+P P ++W ALLG C +G
Sbjct: 414 LKSMTKDHGMNPRSEHHACVVDMLGRAGMLSEARNFIEKLPEQPGLLVWQALLGACSLYG 473
Query: 515 NLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWI 574
+ + G+ AA+ L P++ YV+LAN+++ G W + ART +KMK+ K G SWI
Sbjct: 474 DSKIGKYAAEHLFSETPDSPVPYVLLANIYSSEGNWKERARTIRKMKEVGTAKETGISWI 533
Query: 575 EDRDEIHKFRASDRSHDRSEEIYTII 600
E ++H F D+ H ++E IY ++
Sbjct: 534 EIDKKVHSFTVGDKMHPQTEMIYGVL 559
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 113/422 (26%), Positives = 189/422 (44%), Gaps = 41/422 (9%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNET--PN 58
MY +CG L DA KVF M RD +SWN+++ NG C+ + E N
Sbjct: 93 MYDRCGKLPDAVKVFDEMITRDTISWNALIGGFVRNGNSYFKCGCVGLGMQVFYEMGERN 152
Query: 59 LVSWSAVIGGFTQNGYDEEAIGMLFRMQAEG-LEPNARTLSSVLPACARLQKLSLGKEFH 117
+++W+AVI G QNGY E ++ + M + G +EPN+ T S+L AC+ L+ L G + H
Sbjct: 153 VITWTAVISGLAQNGYHEHSLKLFKEMMSYGSVEPNSLTYLSLLTACSGLEALKEGCQIH 212
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
G I + G S+ + + L+D+Y + G + A KIF + VS I+ G+ NG
Sbjct: 213 GLIMKLGIQSDLCIGSALMDMYSKSGRIGEAWKIFELAEELDMVSLTVILAGFTHNGCEE 272
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
EA ++F +M +G++ +D ++ +F
Sbjct: 273 EAIQIFLKMLKMGIE-------------IDGNVVSVVLGVFG------------------ 301
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
AD SLR G+++H+ + + FV L+ MY + L + FD + +
Sbjct: 302 ----AD-TSLRLGQQVHSFVVKKNFICNPFVSNGLINMYSKCGALDESMKVFDRMRERNS 356
Query: 298 LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ-VHA 356
+ F + A+QL+ +M P T +L ACS +++G + + +
Sbjct: 357 VTWNSMIAAFARHGDALKALQLYEDMQLEGAKPTDVTFLSLLHACSHAGLVKKGMEFLKS 416
Query: 357 YAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNAMLTAYAMHGHGK 415
G + +VDM + G L AR +++ P L+ A+L A +++G K
Sbjct: 417 MTKDHGMNPRSEHHACVVDMLGRAGMLSEARNFIEKLPEQPGLLVWQALLGACSLYGDSK 476
Query: 416 EG 417
G
Sbjct: 477 IG 478
>gi|225446691|ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
[Vitis vinifera]
Length = 657
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 168/507 (33%), Positives = 273/507 (53%), Gaps = 8/507 (1%)
Query: 91 EPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALK 150
EP+ S +L +C LSLGK+ H I +G S+ F+ N L+++Y +CG + +A+
Sbjct: 51 EPS--LFSHLLQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAIT 108
Query: 151 IFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSL 210
+F KN +SCN +I GY +G+ AR++FD+M +R + +WN+M++G +
Sbjct: 109 LFGVMPRKNIMSCNILINGYFRSGDWVTARKMFDEMP----ERNVATWNAMVAGLIQFEF 164
Query: 211 YDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGG 270
+E +F + G P F GSVL CA + +L G+++H G + + V
Sbjct: 165 NEEGLGLF-SRMNELGFLPDEFALGSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVS 223
Query: 271 ALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTP 330
+L MY + L + + + + G N Y + ++ M P
Sbjct: 224 SLAHMYMKCGSLGEGERLIRAMPSQNVVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRP 283
Query: 331 DIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAY 390
D T ++S+CS LAT+ +G+Q+HA I+ G V + ++L+ MY++CG L+++ +
Sbjct: 284 DKITFVSVISSCSELATLGQGQQIHAEVIKAGASLIVSVISSLISMYSRCGCLEYSLKVF 343
Query: 391 KRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIK 450
D+V ++M+ AY HG G E I F ++ + ++FLS L AC H G +
Sbjct: 344 LECENGDVVCWSSMIAAYGFHGRGVEAIDLFNQMEQEKLEANDVTFLSLLYACSHCGLKE 403
Query: 451 TGSEFFDLMA-YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
G +FFDLM Y VKP L+HYTCMVDLL R G + EA I+ +P+ D + W LL
Sbjct: 404 KGIKFFDLMVEKYGVKPRLEHYTCMVDLLGRYGSVEEAEALIRSMPVKADVITWKTLLSA 463
Query: 510 CVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSP 569
C H E + ++ + L+P + YV+L+N+ A RW D++ R+ M+DR++ K P
Sbjct: 464 CKIHKKTEMARRISEEVFRLDPRDPVPYVLLSNIHASDKRWDDVSDVRKAMRDRKLKKEP 523
Query: 570 GCSWIEDRDEIHKFRASDRSHDRSEEI 596
G SW+E +++IH+F D+SH +S EI
Sbjct: 524 GISWLEVKNQIHQFCMGDKSHPKSVEI 550
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 113/434 (26%), Positives = 194/434 (44%), Gaps = 47/434 (10%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KCG LD A +F +MP ++ +S N ++ +G + A + + M N+
Sbjct: 96 LYSKCGQLDTAITLFGVMPRKNIMSCNILINGYFRSGDWVTARKMFDEMPE-----RNVA 150
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+A++ G Q ++EE +G+ RM G P+ L SVL CA L+ L G++ HGY+
Sbjct: 151 TWNAMVAGLIQFEFNEEGLGLFSRMNELGFLPDEFALGSVLRGCAGLRALVAGRQVHGYV 210
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ GF N VV+ L +Y +CG + ++ +N V+ NT+I G +NG E
Sbjct: 211 RKCGFEFNLVVVSSLAHMYMKCGSLGEGERLIRAMPSQNVVAWNTLIAGRAQNGYPEEVL 270
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+ ++ M+ G FR P TF SV+ +
Sbjct: 271 DQYNMMKMAG---------------------------FR---------PDKITFVSVISS 294
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C+++ +L +G++IHA I G V +L+ MY R L + F E EN + +
Sbjct: 295 CSELATLGQGQQIHAEVIKAGASLIVSVISSLISMYSRCGCLEYSLKVFLECENGDVVCW 354
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI- 359
+ + A+ LF++M L + T +L ACS E+G + +
Sbjct: 355 SSMIAAYGFHGRGVEAIDLFNQMEQEKLEANDVTFLSLLYACSHCGLKEKGIKFFDLMVE 414
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTP-DLVSQNAMLTAYAMHGHGKEGI 418
+ G + T +VD+ + GS++ A + + D+++ +L+A +H +
Sbjct: 415 KYGVKPRLEHYTCMVDLLGRYGSVEEAEALIRSMPVKADVITWKTLLSACKIHKKTEMA- 473
Query: 419 AHFRRILASGFRPD 432
RRI FR D
Sbjct: 474 ---RRISEEVFRLD 484
>gi|226530385|ref|NP_001145846.1| CRR4 [Zea mays]
gi|219884683|gb|ACL52716.1| unknown [Zea mays]
gi|414878658|tpg|DAA55789.1| TPA: CRR4 [Zea mays]
Length = 601
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 170/504 (33%), Positives = 276/504 (54%), Gaps = 8/504 (1%)
Query: 100 VLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKN 159
VL +CA G + H + G + + FV LVD Y + G+M SA+ F + IK+
Sbjct: 84 VLKSCALSAASCQGTQTHCHALVRGMLGDVFVQTALVDFYAKNGNMDSAVMAFEEMPIKD 143
Query: 160 EVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFR 219
+ N +I GY +G+V EAR LFD M ++ SWNSMI+ Y + EA ++F
Sbjct: 144 PIPMNCLITGYSRSGDVEEARRLFDSMP----RKTSASWNSMIACYAHGGEFQEALTLF- 198
Query: 220 DLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRY 279
D ++R+G P + T +V CA L G+ A LQ + V AL+EMY +
Sbjct: 199 DQMLREGASPNAITITTVFSICAKTGDLETGRRAKAWVSEEDLQ-NVIVHTALMEMYVKC 257
Query: 280 QDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIIL 339
+ + A+ FD + + + G+ N +++LF M + + P+ T+ +L
Sbjct: 258 RAIDEARREFDRMPRRDVVAWSTMIAGYSHNGRPHESLELFERMKATNCKPNEVTLVGVL 317
Query: 340 SACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLV 399
SAC+ L + E G+Q+ +Y ++G+AL+DMY KCG + AR + R+ ++
Sbjct: 318 SACAQLGSDELGEQIGSYIESQTLPLTSYLGSALIDMYTKCGHVARARDVFHRMEQKVVI 377
Query: 400 SQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM 459
+ N+M+ A++G ++ IA + ++ G +P+ I+FL+ L+AC HAG + G FF M
Sbjct: 378 AWNSMIRGLALNGFAEDAIALYGEMVGDGVQPNEITFLALLTACTHAGLVDKGMAFFQEM 437
Query: 460 AY--YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
P ++H C+VDLL ++G L EAY+FI + + P++V+W LL C +H ++E
Sbjct: 438 KKNKQHASPQVEHCACIVDLLCKSGRLWEAYKFICDMEVEPNAVIWTTLLSACRAHADVE 497
Query: 518 FGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDR 577
++AA +L+ LEPN++ YV+L+N++A AG W D+ R M+ + + K SWIE
Sbjct: 498 LAKLAAGKLVVLEPNSSSIYVLLSNIYADAGLWGDVREIRDLMRSKNLQKLSAYSWIELD 557
Query: 578 DEIHKFRASDRSHDRSEEIYTIID 601
E+H+F D H RS EIY ++D
Sbjct: 558 GEVHRFLVQDTYHPRSAEIYNVVD 581
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 101/422 (23%), Positives = 181/422 (42%), Gaps = 61/422 (14%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y K G++D A F+ MP +D + N ++T + +G V EA + M + S
Sbjct: 123 YAKNGNMDSAVMAFEEMPIKDPIPMNCLITGYSRSGDVEEARRLFDSMPRKTS-----AS 177
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W+++I + G +EA+ + +M EG PNA T+++V CA+ L G+ +++
Sbjct: 178 WNSMIACYAHGGEFQEALTLFDQMLREGASPNAITITTVFSICAKTGDLETGRRAKAWVS 237
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
+ N V L+++Y +C + A + F + ++ V+ +T+I GY NG E+ E
Sbjct: 238 EED-LQNVIVHTALMEMYVKCRAIDEARREFDRMPRRDVVAWSTMIAGYSHNGRPHESLE 296
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
LF++M+ + P T VL AC
Sbjct: 297 LFERMKATNCK------------------------------------PNEVTLVGVLSAC 320
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK 301
A + S G++I + + L +++G AL++MY + + A+ F +E +
Sbjct: 321 AQLGSDELGEQIGSYIESQTLPLTSYLGSALIDMYTKCGHVARARDVFHRMEQKVVIAWN 380
Query: 302 MKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG-------KQV 354
G N + +A+ L+ EM+ + P+ T +L+AC+ +++G K+
Sbjct: 381 SMIRGLALNGFAEDAIALYGEMVGDGVQPNEITFLALLTACTHAGLVDKGMAFFQEMKKN 440
Query: 355 HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS----TPDLVSQNAMLTAYAM 410
+A V +VD+ K G L AYK I P+ V +L+A
Sbjct: 441 KQHA-----SPQVEHCACIVDLLCKSGRLWE---AYKFICDMEVEPNAVIWTTLLSACRA 492
Query: 411 HG 412
H
Sbjct: 493 HA 494
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 101/221 (45%), Gaps = 36/221 (16%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC ++D+A++ F MP RD V+W++++ + NG E+LE ERM + N PN V
Sbjct: 253 MYVKCRAIDEARREFDRMPRRDVVAWSTMIAGYSHNGRPHESLELFERMKA-TNCKPNEV 311
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+ V+ Q G DE LG++ YI
Sbjct: 312 TLVGVLSACAQLGSDE-----------------------------------LGEQIGSYI 336
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
++ + L+D+Y +CG + A +F + K ++ N++I G NG +A
Sbjct: 337 ESQTLPLTSYLGSALIDMYTKCGHVARARDVFHRMEQKVVIAWNSMIRGLALNGFAEDAI 396
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDL 221
L+ +M GVQ I++ ++++ L D+ + F+++
Sbjct: 397 ALYGEMVGDGVQPNEITFLALLTACTHAGLVDKGMAFFQEM 437
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 94/211 (44%), Gaps = 33/211 (15%)
Query: 335 VGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS 394
+ ++L +C+ A +G Q H +A+ G DV + TALVD YAK G++ A +A++ +
Sbjct: 81 IPLVLKSCALSAASCQGTQTHCHALVRGMLGDVFVQTALVDFYAKNGNMDSAVMAFEEMP 140
Query: 395 TPDLVSQNAMLTAY----------------------------AMHGHG---KEGIAHFRR 423
D + N ++T Y A + HG +E + F +
Sbjct: 141 IKDPIPMNCLITGYSRSGDVEEARRLFDSMPRKTSASWNSMIACYAHGGEFQEALTLFDQ 200
Query: 424 ILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGE 483
+L G P+ I+ + S C G ++TG ++ D++ + H T ++++ +
Sbjct: 201 MLREGASPNAITITTVFSICAKTGDLETGRRAKAWVSEEDLQNVIVH-TALMEMYVKCRA 259
Query: 484 LGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
+ EA ++P D V W ++ G +G
Sbjct: 260 IDEARREFDRMPRR-DVVAWSTMIAGYSHNG 289
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 68/173 (39%), Gaps = 38/173 (21%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG + A+ VF M ++ ++WNS++ A NG
Sbjct: 354 MYTKCGHVARARDVFHRMEQKVVIAWNSMIRGLALNG----------------------- 390
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+ E+AI + M +G++PN T ++L AC + G F +
Sbjct: 391 -------------FAEDAIALYGEMVGDGVQPNEITFLALLTACTHAGLVDKGMAFFQEM 437
Query: 121 TRNGFMSNPFVVN--GLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYC 171
+N ++P V + +VD+ + G + A K ++ T ++ C
Sbjct: 438 KKNKQHASPQVEHCACIVDLLCKSGRLWEAYKFICDMEVEPNAVIWTTLLSAC 490
>gi|225433310|ref|XP_002282466.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Vitis vinifera]
Length = 625
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 179/554 (32%), Positives = 298/554 (53%), Gaps = 45/554 (8%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
N+ W+++I G+ +N EA + +M + + P+ TLS++ + L L GK H
Sbjct: 88 NVFLWNSLINGYAKNRLYNEAFQLFNQMCSSDVLPDDFTLSTLSKVSSELGALFSGKSIH 147
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
G R GF+S+ V N ++ +Y C+ GN
Sbjct: 148 GKSIRIGFVSDTVVANSIMSMY-------------------------------CKCGNFE 176
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYV--DNSLYDEAFSMFRDLLMRDGIEPTSFTFG 235
E+R++FD+M R SWN +I+GY N + E F + D + P ++T
Sbjct: 177 ESRKVFDEM----TIRNSGSWNVLIAGYAVSGNCNFREETWEFVKQMQMDEVRPDAYTIS 232
Query: 236 SVLIAC-ADMNSLRKGKEIHALAI----ALGLQSDTFVGGALVEMYCRYQDLVAAQMAFD 290
S+L C D G+E+H + LGL SD +G L++MY R +V + FD
Sbjct: 233 SLLPLCDGDKGKWDYGRELHCYIVKNELVLGLDSDVHLGCCLIDMYSRSNKVVVGRRVFD 292
Query: 291 EIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLD-LTPDIYTVGIILSACSSLATME 349
++ +G+ N + A+ LF +M +D + P+ ++ +L ACSS + +
Sbjct: 293 RMKCRNVFSWTAMINGYVENGDSDEALSLFRDMQVIDGIEPNRVSLVSVLPACSSFSGLL 352
Query: 350 RGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNAMLTAY 408
G+Q+H +A+R +++V + AL+DMY+KCGSL AR ++ S D +S ++M++ Y
Sbjct: 353 SGRQIHGFAVRKELNNEVSLCNALIDMYSKCGSLDSARRVFEDDSLCKDAISWSSMISGY 412
Query: 409 AMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFD-LMAYYDVKPS 467
+HG G+E I + ++L +G RPD I+ + LSAC +G + G + ++ Y ++P+
Sbjct: 413 GLHGKGQEAILLYDKMLQAGIRPDMITTVGILSACSRSGLVNEGLNIYSSVINDYGIEPT 472
Query: 468 LKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLI 527
L+ + C+VD+L RAG+L A +FIK +P+ P +WGAL+ + HG+LE ++A LI
Sbjct: 473 LEIFACIVDMLGRAGQLDPALDFIKAMPVEPGPSVWGALVSCSIIHGDLEMQELAYRFLI 532
Query: 528 ELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASD 587
+LEP N NYV ++NL+A + RW +A R+ MKD+R+ K PGCSWI ++ H F +D
Sbjct: 533 QLEPENPSNYVSISNLYASSRRWDAVAEVRRMMKDKRLRKVPGCSWISINNKTHCFYVAD 592
Query: 588 RSHDRSEEIYTIID 601
++H + IY ++D
Sbjct: 593 KAHPSATSIYNMLD 606
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 96/384 (25%), Positives = 182/384 (47%), Gaps = 22/384 (5%)
Query: 158 KNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSM 217
+N + +I Y + +R +FD ++H + + WNS+I+GY N LY+EAF +
Sbjct: 56 QNSLLATKLIFAYAICQHPYHSRLVFDSLQH----KNVFLWNSLINGYAKNRLYNEAFQL 111
Query: 218 FRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYC 277
F + D + P FT ++ +++ +L GK IH +I +G SDT V +++ MYC
Sbjct: 112 FNQMCSSD-VLPDDFTLSTLSKVSSELGALFSGKSIHGKSIRIGFVSDTVVANSIMSMYC 170
Query: 278 RYQDLVAAQMAFDEIENIEN-------LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTP 330
+ + ++ FDE+ I N + G TW + +M ++ P
Sbjct: 171 KCGNFEESRKVFDEM-TIRNSGSWNVLIAGYAVSGNCNFREETW---EFVKQMQMDEVRP 226
Query: 331 DIYTVGIILSACS-SLATMERGKQVHAYAIR----CGYDSDVHIGTALVDMYAKCGSLKH 385
D YT+ +L C + G+++H Y ++ G DSDVH+G L+DMY++ +
Sbjct: 227 DAYTISSLLPLCDGDKGKWDYGRELHCYIVKNELVLGLDSDVHLGCCLIDMYSRSNKVVV 286
Query: 386 ARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRI-LASGFRPDHISFLSALSACV 444
R + R+ ++ S AM+ Y +G E ++ FR + + G P+ +S +S L AC
Sbjct: 287 GRRVFDRMKCRNVFSWTAMINGYVENGDSDEALSLFRDMQVIDGIEPNRVSLVSVLPACS 346
Query: 445 HAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWG 504
+ +G + ++ + ++D+ S+ G L A + + D++ W
Sbjct: 347 SFSGLLSGRQIHGFAVRKELNNEVSLCNALIDMYSKCGSLDSARRVFEDDSLCKDAISWS 406
Query: 505 ALLGGCVSHGNLEFGQIAADRLIE 528
+++ G HG + + D++++
Sbjct: 407 SMISGYGLHGKGQEAILLYDKMLQ 430
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 108/420 (25%), Positives = 181/420 (43%), Gaps = 76/420 (18%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG+ ++++KVF M R+ SWN ++ A +G C
Sbjct: 168 MYCKCGNFEESRKVFDEMTIRNSGSWNVLIAGYAVSG------NC--------------- 206
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPAC-ARLQKLSLGKEFHGY 119
+ EE + +MQ + + P+A T+SS+LP C K G+E H Y
Sbjct: 207 ------------NFREETWEFVKQMQMDEVRPDAYTISSLLPLCDGDKGKWDYGRELHCY 254
Query: 120 ITRN----GFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGN 175
I +N G S+ + L+D+Y R ++ ++F + +N S +I GY ENG+
Sbjct: 255 IVKNELVLGLDSDVHLGCCLIDMYSRSNKVVVGRRVFDRMKCRNVFSWTAMINGYVENGD 314
Query: 176 VAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFG 235
EA S+FRD+ + DGIEP +
Sbjct: 315 SDEA-----------------------------------LSLFRDMQVIDGIEPNRVSLV 339
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
SVL AC+ + L G++IH A+ L ++ + AL++MY + L +A+ F++
Sbjct: 340 SVLPACSSFSGLLSGRQIHGFAVRKELNNEVSLCNALIDMYSKCGSLDSARRVFEDDSLC 399
Query: 296 ENLLG-KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV 354
++ + G+ + A+ L+ +ML + PD+ T ILSACS + G +
Sbjct: 400 KDAISWSSMISGYGLHGKGQEAILLYDKMLQAGIRPDMITTVGILSACSRSGLVNEGLNI 459
Query: 355 HAYAIR-CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST-PDLVSQNAMLTAYAMHG 412
++ I G + + I +VDM + G L A K + P A+++ +HG
Sbjct: 460 YSSVINDYGIEPTLEIFACIVDMLGRAGQLDPALDFIKAMPVEPGPSVWGALVSCSIIHG 519
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 146/321 (45%), Gaps = 10/321 (3%)
Query: 246 SLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKED 305
SL+ ++ H+ ++LGL ++ + L+ Y Q +++ FD +++ L +
Sbjct: 38 SLKLTRQSHSRILSLGLSQNSLLATKLIFAYAICQHPYHSRLVFDSLQHKNVFLWNSLIN 97
Query: 306 GFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDS 365
G+ N A QLF++M S D+ PD +T+ + S L + GK +H +IR G+ S
Sbjct: 98 GYAKNRLYNEAFQLFNQMCSSDVLPDDFTLSTLSKVSSELGALFSGKSIHGKSIRIGFVS 157
Query: 366 DVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGH---GKEGIAHFR 422
D + +++ MY KCG+ + +R + ++ + S N ++ YA+ G+ +E +
Sbjct: 158 DTVVANSIMSMYCKCGNFEESRKVFDEMTIRNSGSWNVLIAGYAVSGNCNFREETWEFVK 217
Query: 423 RILASGFRPDHISFLSALSACV-HAGSIKTGSEFFDLMAYYDVKPSLKHYT----CMVDL 477
++ RPD + S L C G G E + ++ L C++D+
Sbjct: 218 QMQMDEVRPDAYTISSLLPLCDGDKGKWDYGRELHCYIVKNELVLGLDSDVHLGCCLIDM 277
Query: 478 LSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNY 537
SR+ ++ ++ + W A++ G V +G+ + ++ R +++ N
Sbjct: 278 YSRSNKVVVGRRVFDRMK-CRNVFSWTAMINGYVENGDSD-EALSLFRDMQVIDGIEPNR 335
Query: 538 VMLANLFAYAGRWSDLARTRQ 558
V L ++ +S L RQ
Sbjct: 336 VSLVSVLPACSSFSGLLSGRQ 356
>gi|449457327|ref|XP_004146400.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Cucumis sativus]
Length = 720
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 192/602 (31%), Positives = 317/602 (52%), Gaps = 50/602 (8%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KC L A++VF + + S+N++++A A V A + + M P+ V
Sbjct: 52 LYSKCRRLSAARRVFDHTHDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQ-----PDSV 106
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
S++ +I + + G + A + M+ L+ + TLS ++ AC + L ++ H
Sbjct: 107 SYNTLIAAYARRGDTQPAFQLFLEMREAFLDMDGFTLSGIITACG--INVGLIRQLHALS 164
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
VV GL D Y G N +I Y +NG + EAR
Sbjct: 165 ----------VVTGL-DSYVSVG--------------------NALITSYSKNGFLKEAR 193
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+F L R +SWNSM+ Y+ + +A ++ ++ +R G+ FT SVL A
Sbjct: 194 RIFHW---LSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVR-GLIVDIFTLASVLTA 249
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQD-LVAAQMAFDEIENIENLL 299
++ L G + HA I G ++ VG L+++Y + ++ + FDEI N + +L
Sbjct: 250 FTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVL 309
Query: 300 GKMKEDGFEPNVY---TWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHA 356
G+ ++Y + A++ F ++ + PD ++ ++SACS++++ +G+QVH
Sbjct: 310 WNTMISGY--SLYEDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQGRQVHG 367
Query: 357 YAIRCGYDSD-VHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGK 415
A++ S+ + + AL+ MY+KCG+L+ A+ + + + VS N+M+ YA HG G
Sbjct: 368 LALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGF 427
Query: 416 EGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCM 474
+ + F+R+L GF P +I+F+S L+AC H G ++ G +F++M + ++P H++CM
Sbjct: 428 QSLHLFQRMLEMGFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFSCM 487
Query: 475 VDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNT 534
+DLL RAG+L EA I+ IP P W ALLG C HGN+E AA+RL++L+P N
Sbjct: 488 IDLLGRAGKLSEAERLIETIPFDPGFFFWSALLGACRIHGNVELAIKAANRLLQLDPLNA 547
Query: 535 GNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSE 594
YVMLAN+++ GR D A R+ M+DR + K PGCSWIE IH F A D H +
Sbjct: 548 APYVMLANIYSDNGRLQDAASVRKLMRDRGVKKKPGCSWIEVNRRIHIFVAEDTFHPMIK 607
Query: 595 EI 596
+I
Sbjct: 608 KI 609
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 126/461 (27%), Positives = 222/461 (48%), Gaps = 21/461 (4%)
Query: 101 LPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNE 160
L C + L GK H ++ ++ ++ N + +Y +C + +A ++F N
Sbjct: 15 LKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHTHDCNV 74
Query: 161 VSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRD 220
S NT+I Y + V A +LFD+M Q +S+N++I+ Y AF +F
Sbjct: 75 FSFNTLISAYAKESYVEVAHQLFDEMP----QPDSVSYNTLIAAYARRGDTQPAFQLF-- 128
Query: 221 LLMRDG-IEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRY 279
L MR+ ++ FT ++ AC L +++HAL++ GL S VG AL+ Y +
Sbjct: 129 LEMREAFLDMDGFTLSGIITACGINVGLI--RQLHALSVVTGLDSYVSVGNALITSYSKN 186
Query: 280 QDLVAAQMAFDEI-ENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGII 338
L A+ F + E+ + + + + A++L+ EM L DI+T+ +
Sbjct: 187 GFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASV 246
Query: 339 LSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGS-LKHARLAYKRISTPD 397
L+A +++ + G Q HA I+ GY + H+G+ L+D+Y+KCG + R + IS PD
Sbjct: 247 LTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPD 306
Query: 398 LVSQNAMLTAYAMHGH-GKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFF 456
LV N M++ Y+++ E + FR++ G RPD S + +SAC + S G +
Sbjct: 307 LVLWNTMISGYSLYEDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQGRQVH 366
Query: 457 DLMAYYDVKPS--LKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
L D+ PS + ++ + S+ G L +A +P ++V + +++ G HG
Sbjct: 367 GLALKLDI-PSNRISVNNALIAMYSKCGNLRDAKTLFDTMP-EHNTVSYNSMIAGYAQHG 424
Query: 515 NLEFGQIAA-DRLIEL--EPNNTGNYVMLANLFAYAGRWSD 552
+ F + R++E+ P N +LA A+ GR D
Sbjct: 425 -MGFQSLHLFQRMLEMGFTPTNITFISVLAAC-AHTGRVED 463
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 134/313 (42%), Gaps = 42/313 (13%)
Query: 233 TFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI 292
F L C LR GK +HAL I + + T++ + +Y + + L AA+ FD
Sbjct: 10 NFRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHT 69
Query: 293 EN-----IENLLGKMKEDGF------------EPNVYTWN--------------AMQLFS 321
+ L+ ++ + +P+ ++N A QLF
Sbjct: 70 HDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFL 129
Query: 322 EMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCG 381
EM L D +T+ I++AC + R Q+HA ++ G DS V +G AL+ Y+K G
Sbjct: 130 EMREAFLDMDGFTLSGIITACGINVGLIR--QLHALSVVTGLDSYVSVGNALITSYSKNG 187
Query: 382 SLKHARLAYKRISTP-DLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSAL 440
LK AR + +S D VS N+M+ AY H G + + + + G D + S L
Sbjct: 188 FLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVL 247
Query: 441 SACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAG----ELGEAYEFIKKIPM 496
+A + + G +F + + + ++DL S+ G + + ++ I
Sbjct: 248 TAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISN--- 304
Query: 497 APDSVMWGALLGG 509
PD V+W ++ G
Sbjct: 305 -PDLVLWNTMISG 316
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 124/282 (43%), Gaps = 23/282 (8%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG+L DAK +F MPE + VS+NS++ A +G+ ++L +RM + TP +
Sbjct: 388 MYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEM-GFTPTNI 446
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRM--QAEGLEPNARTLSSVLPACARLQKLSLGKEFHG 118
++ +V+ G E+ + F M Q G+EP A S ++ R KLS E
Sbjct: 447 TFISVLAACAHTGRVEDG-KIYFNMMKQKFGIEPEAGHFSCMIDLLGRAGKLS---EAER 502
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIV---GYCENGN 175
I F F + L+ R G++ A+K ++ + ++ ++ Y +NG
Sbjct: 503 LIETIPFDPGFFFWSALLGACRIHGNVELAIKAANRLLQLDPLNAAPYVMLANIYSDNGR 562
Query: 176 VAEARELFDQMEHLGVQRGI-ISW---NSMISGYVDNSLYDEAFSMFRDLL--MRDGIEP 229
+ +A + M GV++ SW N I +V + ++ L M I+
Sbjct: 563 LQDAASVRKLMRDRGVKKKPGCSWIEVNRRIHIFVAEDTFHPMIKKIQEYLEEMMRKIKK 622
Query: 230 TSFT--FGSVLIACADM-----NSLRKGKEIHALAIALGLQS 264
+T S L+ D LR G LA++ GL S
Sbjct: 623 VGYTPEVRSALVGGDDRVWQREEELRLGHHSEKLAVSFGLMS 664
>gi|225435444|ref|XP_002282803.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g40720-like [Vitis vinifera]
Length = 854
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 191/602 (31%), Positives = 315/602 (52%), Gaps = 79/602 (13%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY GSL+ + ++F+ +P RD WNS+
Sbjct: 299 MYSNNGSLESSHQLFESVPNRDAPLWNSM------------------------------- 327
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQK-LSLGKEFHGY 119
I + G EEA+ + RMQ+EG++ + RT+ +L C L L GK H +
Sbjct: 328 -----ISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHAH 382
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ ++G + + N L+ +Y E++C V
Sbjct: 383 VIKSGMRIDASLGNALLSMY-------------------TELNC------------VESV 411
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDG-IEPTSFTFGSVL 238
+++FD+M+ GV IISWN+MI N+L +A +F MR+ I+P S+T S+L
Sbjct: 412 QKIFDRMK--GVD--IISWNTMILALARNTLRAQACELFER--MRESEIKPNSYTIISIL 465
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
AC D+ L G+ IH + ++ + + AL +MY D A+ F+ + + +
Sbjct: 466 AACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALADMYMNCGDEATARDLFEGCPDRDLI 525
Query: 299 LGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYA 358
+ N A+ LF M+S + P+ T+ +LS+ + LAT+ +G+ +HAY
Sbjct: 526 SWNAMIASYVKNNQAHKALLLFHRMIS-EAEPNSVTIINVLSSFTHLATLPQGQSLHAYV 584
Query: 359 IRCGYDS--DVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKE 416
R G+ D+ + A + MYA+CGSL+ A +K + +++S NAM+ Y M+G G +
Sbjct: 585 TRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLPKRNIISWNAMIAGYGMNGRGSD 644
Query: 417 GIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMV 475
+ F ++L GFRP+ ++F+S LSAC H+G I+ G + F M ++V P L HY+C+V
Sbjct: 645 AMLAFSQMLEDGFRPNGVTFVSVLSACSHSGFIEMGLQLFHSMVQDFNVTPELVHYSCIV 704
Query: 476 DLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTG 535
DLL+R G + EA EFI +P+ PD+ +W ALL C ++ + + + ++L +LEP N G
Sbjct: 705 DLLARGGCIDEAREFIDSMPIEPDASVWRALLSSCRAYSDAKQAKTIFEKLDKLEPMNAG 764
Query: 536 NYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEE 595
NYV+L+N++A AG W ++ R R +K++ + K PG SWI ++++H F A DRSH +S++
Sbjct: 765 NYVLLSNVYATAGLWLEVRRIRTWLKEKGLRKPPGISWIIVKNQVHCFSAGDRSHPQSDK 824
Query: 596 IY 597
IY
Sbjct: 825 IY 826
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 147/536 (27%), Positives = 231/536 (43%), Gaps = 77/536 (14%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y KCG ++DA+ VF M +RD V WN
Sbjct: 98 YCKCGFVEDARCVFDAMSDRDVVLWN---------------------------------- 123
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
A++ G+ G EEA+ ++ M E L PN+RT+ ++L AC +L LG+ HGY
Sbjct: 124 --AMVYGYVGWGCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCL 181
Query: 122 RNG-FMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
RNG F SNP V L+ Y R DM +F ++N VS N +I GY + G+ +A
Sbjct: 182 RNGMFDSNPHVATALIGFYLRF-DMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKAL 240
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
ELF QM VD +D T + A
Sbjct: 241 ELFVQM------------------LVDEVKFD------------------CVTMLVAVQA 264
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA++ SL+ GK+IH LAI D ++ AL+ MY L ++ F+ + N + L
Sbjct: 265 CAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNRDAPLW 324
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLAT-MERGKQVHAYAI 359
+ AM LF M S + D TV I+LS C LA+ + +GK +HA+ I
Sbjct: 325 NSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHAHVI 384
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
+ G D +G AL+ MY + ++ + + R+ D++S N M+ A A + +
Sbjct: 385 KSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMILALARNTLRAQACE 444
Query: 420 HFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLS 479
F R+ S +P+ + +S L+AC + G + + ++ + T + D+
Sbjct: 445 LFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALADMYM 504
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLI-ELEPNNT 534
G+ A + + P D + W A++ V + + R+I E EPN+
Sbjct: 505 NCGDEATARDLFEGCP-DRDLISWNAMIASYVKNNQAHKALLLFHRMISEAEPNSV 559
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 128/501 (25%), Positives = 225/501 (44%), Gaps = 85/501 (16%)
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W++VI D+ + +M++ G+ PN TL VL ACA + GK H I
Sbjct: 21 WNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERGKSIHRSIQ 80
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
M + V +VD Y +CG V +AR
Sbjct: 81 GTDLMDDVRVGTAVVDFYCKCG-------------------------------FVEDARC 109
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
+FD M R ++ WN+M+ GYV Y+EA + R++ R+ + P S T ++L+AC
Sbjct: 110 VFDAMS----DRDVVLWNAMVYGYVGWGCYEEAMLLVREM-GRENLRPNSRTMVALLLAC 164
Query: 242 ADMNSLRKGKEIHALAIALGL-QSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL- 299
+ LR G+ +H + G+ S+ V AL+ Y R+ D+ + FD + + N++
Sbjct: 165 EGASELRLGRGVHGYCLRNGMFDSNPHVATALIGFYLRF-DMRVLPLLFD-LMVVRNIVS 222
Query: 300 -GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYA 358
M ++ Y + A++LF +ML ++ D T+ + + AC+ L +++ GKQ+H A
Sbjct: 223 WNAMISGYYDVGDY-FKALELFVQMLVDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLA 281
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGI 418
I+ + D++I AL++MY+ GSL+ + ++ + D N+M++AYA G +E +
Sbjct: 282 IKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAM 341
Query: 419 AHFRRILASGFRPDHISFLSALSAC------------VHAGSIKTG-------------- 452
F R+ + G + D + + LS C +HA IK+G
Sbjct: 342 DLFIRMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHAHVIKSGMRIDASLGNALLSM 401
Query: 453 ----------SEFFDLMAYYDVKPSLKHYTCMVDLLSR---AGELGEAYEFIKKIPMAPD 499
+ FD M D+ + M+ L+R + E +E +++ + P+
Sbjct: 402 YTELNCVESVQKIFDRMKGVDIIS----WNTMILALARNTLRAQACELFERMRESEIKPN 457
Query: 500 SVMWGALLGGCVSHGNLEFGQ 520
S ++L C L+FG+
Sbjct: 458 SYTIISILAACEDVTCLDFGR 478
>gi|242091211|ref|XP_002441438.1| hypothetical protein SORBIDRAFT_09g026705 [Sorghum bicolor]
gi|241946723|gb|EES19868.1| hypothetical protein SORBIDRAFT_09g026705 [Sorghum bicolor]
Length = 771
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 184/587 (31%), Positives = 289/587 (49%), Gaps = 73/587 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGK G L+ + +VF M E++ VSWNS
Sbjct: 257 MYGKFGDLESSMRVFNGMQEKNEVSWNS-------------------------------- 284
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+G F G+ E+ + M M + P + TLSS+LPA L LGKE HGY
Sbjct: 285 ----ALGCFAHAGFHEDVLEMFRVMSEHEVTPGSVTLSSLLPALVDLGYFHLGKEVHGYS 340
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R S+ F+ N L+D+Y + G + A IF +N VS N +I +NG EA
Sbjct: 341 IRRAMESDIFIANSLMDMYAKFGCLEKASAIFENIEGRNVVSWNAMIANLAQNGAETEAF 400
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
L +M+ ++G P SFT ++L A
Sbjct: 401 SLVIEMQ------------------------------------KNGECPNSFTLVNLLPA 424
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C+ + S++ GK+IHA +I L SD FV AL+++Y + L AQ FD E +++
Sbjct: 425 CSRVASVKMGKQIHAWSIHRSLMSDLFVSNALIDVYAKCGQLSVAQDIFDRSEK-DDVSY 483
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G+ + + ++ LF +M S + D + LSAC++L+ ++GK++H +R
Sbjct: 484 NTLIVGYSQSQCCFESLHLFQQMRSAGIEYDAVSFMGCLSACANLSAFKQGKEIHGVLVR 543
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
++ + +L+D+Y K G L A + RI+ D+ S N M+ Y MHG
Sbjct: 544 RLLNTHPFLANSLLDLYTKGGMLATASKIFNRITRKDVASWNTMILGYGMHGQIDVAFEL 603
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSR 480
F + G DH+S+++ LSAC H G + G ++F M ++KP HY CMVDLL R
Sbjct: 604 FDLMKDDGVDYDHVSYIAVLSACSHGGLVDRGKKYFSQMIAQNIKPQQMHYACMVDLLGR 663
Query: 481 AGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVML 540
AG+L E+ E I +P +S +WGALLG C HG++E ++AA+ L EL+P ++G Y +L
Sbjct: 664 AGQLSESVEIITNMPFPANSDVWGALLGSCRIHGDIELARLAAEHLFELKPEHSGYYTLL 723
Query: 541 ANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASD 587
N+++ +G W++ + MK R++ K+P SW++ +++ F D
Sbjct: 724 RNMYSESGMWNEANEIKTLMKSRKVQKNPAYSWVQSGNKLQAFLVGD 770
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 120/458 (26%), Positives = 200/458 (43%), Gaps = 52/458 (11%)
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKL-----SLGKEF 116
W+++ G EA+ + M G+ P+ RT L A A + G E
Sbjct: 74 WNSLSRALASAGLPSEALRVYNCMVRSGVRPDDRTFPFALHAAAAAVVAEAEHPAKGAEL 133
Query: 117 HGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNV 176
H R G + L DV+ + NT++ Y G
Sbjct: 134 HAAALRRGLL--------LADVF----------------------AGNTLVTFYAARGRA 163
Query: 177 AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGS 236
A+AR +FD+M R I+SWNS++S + N + ++A + MR GI + S
Sbjct: 164 ADARRVFDEMP----ARDIVSWNSLVSALLTNGMLEDAKRAVVGM-MRSGIPVNVASLVS 218
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
V+ AC G +H L + GL S +G ALV+MY ++ DL ++ F+ ++
Sbjct: 219 VVPACGTERDEGFGLSVHGLVLKSGLDSVVNLGNALVDMYGKFGDLESSMRVFNGMQEKN 278
Query: 297 NL-----LGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG 351
+ LG GF +V +++F M ++TP T+ +L A L G
Sbjct: 279 EVSWNSALGCFAHAGFHEDV-----LEMFRVMSEHEVTPGSVTLSSLLPALVDLGYFHLG 333
Query: 352 KQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMH 411
K+VH Y+IR +SD+ I +L+DMYAK G L+ A ++ I ++VS NAM+ A +
Sbjct: 334 KEVHGYSIRRAMESDIFIANSLMDMYAKFGCLEKASAIFENIEGRNVVSWNAMIANLAQN 393
Query: 412 GHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHY 471
G E + + +G P+ + ++ L AC S+K G + + + L
Sbjct: 394 GAETEAFSLVIEMQKNGECPNSFTLVNLLPACSRVASVKMGKQIHAWSIHRSLMSDLFVS 453
Query: 472 TCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
++D+ ++ G+L A + + D V + L+ G
Sbjct: 454 NALIDVYAKCGQLSVAQDIFDR--SEKDDVSYNTLIVG 489
>gi|357125908|ref|XP_003564631.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Brachypodium distachyon]
Length = 647
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 170/508 (33%), Positives = 279/508 (54%), Gaps = 9/508 (1%)
Query: 90 LEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSAL 149
L +A S + AC + + L ++ H + +G ++ F N L+ Y GD+ +A
Sbjct: 41 LWSDASLFSHIFRAC---RAIPLLRQLHAFAATSGAAADRFTTNNLLLAYADLGDLPTAR 97
Query: 150 KIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNS 209
+F S +N +S N +I G +NG++ ARELFD+M R + +WN+M++G +
Sbjct: 98 HLFEGISKRNVMSWNILIGGCIKNGDLGSARELFDKMP----TRNVATWNAMVAGLTNVG 153
Query: 210 LYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVG 269
L +++ F + R+G+ P F GSV CA + + G+++HA + G+ SD VG
Sbjct: 154 LDEDSLQFFL-AMRREGMHPDEFGLGSVFRCCAGLLDVVSGRQVHAYVVRSGMDSDMCVG 212
Query: 270 GALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLT 329
+L MY R L + + ++ + G N + A++ FS M +++
Sbjct: 213 NSLAHMYMRCGCLAEGEAVLRALPSLTIVSFNTTIAGRTQNGDSEGALEYFSMMRGVEVA 272
Query: 330 PDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLA 389
PD+ T +S CS LA + +G+QVHA I+ G D V + T+LV MY++CG L +
Sbjct: 273 PDVVTFVSAISCCSDLAALAQGQQVHAQVIKAGVDKVVPVITSLVHMYSRCGCLGDSERV 332
Query: 390 YKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSI 449
Y DL +AM++A HG G + + F++++ G P+ ++FL+ L AC H+G
Sbjct: 333 YDGYCGLDLFLLSAMISACGFHGQGHKAVELFKQMMNGGAEPNEVTFLALLYACSHSGLK 392
Query: 450 KTGSEFFDLMA-YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLG 508
G EFF+LM Y +PS+KHY C+VDLL R+G L EA I +P+ D V+W LL
Sbjct: 393 DEGLEFFELMTKTYGFQPSVKHYNCIVDLLGRSGCLDEAEALILSMPVRADGVIWKTLLS 452
Query: 509 GCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKS 568
C + N + + A+R+IE +P ++ YV+L+N+ A + RW D+ R+ M+++ + K
Sbjct: 453 ACKTQKNFDMAERIAERVIESDPRDSAPYVLLSNIRATSKRWGDVTEVRKIMREKDIRKE 512
Query: 569 PGCSWIEDRDEIHKFRASDRSHDRSEEI 596
PG SW+E + ++H+F D+SH R EI
Sbjct: 513 PGVSWVEHKGQVHQFCTGDKSHPRQGEI 540
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 102/388 (26%), Positives = 169/388 (43%), Gaps = 46/388 (11%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y G L A+ +F+ + +R+ +SWN ++ C NG + A E ++M T N+ +
Sbjct: 87 YADLGDLPTARHLFEGISKRNVMSWNILIGGCIKNGDLGSARELFDKMP-----TRNVAT 141
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W+A++ G T G DE+++ M+ EG+ P+ L SV CA L + G++ H Y+
Sbjct: 142 WNAMVAGLTNVGLDEDSLQFFLAMRREGMHPDEFGLGSVFRCCAGLLDVVSGRQVHAYVV 201
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
R+G S+ V N L +Y RCG + + VS NT I G +NG+ A E
Sbjct: 202 RSGMDSDMCVGNSLAHMYMRCGCLAEGEAVLRALPSLTIVSFNTTIAGRTQNGDSEGALE 261
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
F M RG+ + P TF S + C
Sbjct: 262 YFSMM------RGV------------------------------EVAPDVVTFVSAISCC 285
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL-- 299
+D+ +L +G+++HA I G+ V +LV MY R L ++ +D ++ L
Sbjct: 286 SDLAALAQGQQVHAQVIKAGVDKVVPVITSLVHMYSRCGCLGDSERVYDGYCGLDLFLLS 345
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
+ GF + A++LF +M++ P+ T +L ACS + G +
Sbjct: 346 AMISACGFHGQGH--KAVELFKQMMNGGAEPNEVTFLALLYACSHSGLKDEGLEFFELMT 403
Query: 360 RC-GYDSDVHIGTALVDMYAKCGSLKHA 386
+ G+ V +VD+ + G L A
Sbjct: 404 KTYGFQPSVKHYNCIVDLLGRSGCLDEA 431
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 107/238 (44%), Gaps = 6/238 (2%)
Query: 45 CLERMSSLDNETPNL--VSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLP 102
CL ++ P+L VS++ I G TQNG E A+ M+ + P+ T S +
Sbjct: 224 CLAEGEAVLRALPSLTIVSFNTTIAGRTQNGDSEGALEYFSMMRGVEVAPDVVTFVSAIS 283
Query: 103 ACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVS 162
C+ L L+ G++ H + + G V+ LV +Y RCG + + +++ + +
Sbjct: 284 CCSDLAALAQGQQVHAQVIKAGVDKVVPVITSLVHMYSRCGCLGDSERVYDGYCGLDLFL 343
Query: 163 CNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLL 222
+ +I +G +A ELF QM + G + +++ +++ + L DE F +
Sbjct: 344 LSAMISACGFHGQGHKAVELFKQMMNGGAEPNEVTFLALLYACSHSGLKDEGLEFFELMT 403
Query: 223 MRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQ 280
G +P+ + ++ L E AL +++ +++D + L+ C+ Q
Sbjct: 404 KTYGFQPSVKHYNCIVDLLGRSGCL---DEAEALILSMPVRADGVIWKTLLSA-CKTQ 457
Score = 39.7 bits (91), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 56/107 (52%), Gaps = 2/107 (1%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +CG L D+++V+ D +++++AC +G +A+E ++M + E PN V
Sbjct: 319 MYSRCGCLGDSERVYDGYCGLDLFLLSAMISACGFHGQGHKAVELFKQMMNGGAE-PNEV 377
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRM-QAEGLEPNARTLSSVLPACAR 106
++ A++ + +G +E + M + G +P+ + + ++ R
Sbjct: 378 TFLALLYACSHSGLKDEGLEFFELMTKTYGFQPSVKHYNCIVDLLGR 424
>gi|356540339|ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g22690-like [Glycine max]
Length = 836
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 190/632 (30%), Positives = 308/632 (48%), Gaps = 104/632 (16%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y +CG +D +K+F M ER N+VS
Sbjct: 175 YAECGKVDLGRKLFDGMLER------------------------------------NVVS 198
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W+++I G++ +EA+ + F+M G+EPN T+ V+ ACA+L+ L LGK+ YI+
Sbjct: 199 WTSLINGYSGRDLSKEAVSLFFQMGEAGVEPNPVTMVCVISACAKLKDLELGKKVCSYIS 258
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
G + +VN LVD+Y +CGD+ +A +IF + + KN V NTI+ Y + ++
Sbjct: 259 ELGMELSTIMVNALVDMYMKCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLV 318
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
+ D+M ++ G P T S + AC
Sbjct: 319 ILDEM------------------------------------LQKGPRPDKVTMLSTIAAC 342
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIEN-----IE 296
A + L GK HA + GL+ + A+++MY + AA F+ + N
Sbjct: 343 AQLGDLSVGKSSHAYVLRNGLEGWDNISNAIIDMYMKCGKREAACKVFEHMPNKTVVTWN 402
Query: 297 NLLGKMKEDG------------FEPNVYTWNAM--------------QLFSEMLSLDLTP 330
+L+ + DG E ++ +WN M +LF EM + +
Sbjct: 403 SLIAGLVRDGDMELAWRIFDEMLERDLVSWNTMIGALVQVSMFEEAIELFREMQNQGIPG 462
Query: 331 DIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAY 390
D T+ I SAC L ++ K V Y + D+ +GTALVDM+++CG A +
Sbjct: 463 DRVTMVGIASACGYLGALDLAKWVCTYIEKNDIHVDLQLGTALVDMFSRCGDPSSAMHVF 522
Query: 391 KRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIK 450
KR+ D+ + A + AM G+ + I F +L +PD + F++ L+AC H GS+
Sbjct: 523 KRMEKRDVSAWTAAIGVMAMEGNTEGAIELFNEMLEQKVKPDDVVFVALLTACSHGGSVD 582
Query: 451 TGSE-FFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
G + F+ + + ++P + HY CMVDLL RAG L EA + I+ +P+ P+ V+WG+LL
Sbjct: 583 QGRQLFWSMEKAHGIRPHIVHYGCMVDLLGRAGLLEEAVDLIQSMPIEPNDVVWGSLLAA 642
Query: 510 CVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSP 569
C H N+E AA++L +L P G +V+L+N++A AG+W+D+AR R +MK++ + K P
Sbjct: 643 CRKHKNVELAHYAAEKLTQLAPERVGIHVLLSNIYASAGKWTDVARVRLQMKEKGVQKVP 702
Query: 570 GCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
G S IE + IH+F + D SH + I +++
Sbjct: 703 GSSSIEVQGLIHEFTSGDESHAENTHIGLMLE 734
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 127/496 (25%), Positives = 204/496 (41%), Gaps = 68/496 (13%)
Query: 53 DNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSL 112
D +L ++ +I G+ G ++AI + +M G+ P+ T +L AC+++ LS
Sbjct: 89 DGNMASLFMYNCLIRGYASAGLGDQAILLYVQMLVMGIVPDKYTFPFLLSACSKILALSE 148
Query: 113 GKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCE 172
G + HG + + G + FV N L+ Y CG + K+F +N VS ++I GY
Sbjct: 149 GVQVHGAVLKMGLEGDIFVSNSLIHFYAECGKVDLGRKLFDGMLERNVVSWTSLINGYSG 208
Query: 173 NGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSF 232
EA LF QM GV EP
Sbjct: 209 RDLSKEAVSLFFQMGEAGV------------------------------------EPNPV 232
Query: 233 TFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI 292
T V+ ACA + L GK++ + LG++ T + ALV+MY + D+ AA+ FDE
Sbjct: 233 TMVCVISACAKLKDLELGKKVCSYISELGMELSTIMVNALVDMYMKCGDICAARQIFDEC 292
Query: 293 ENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGK 352
N ++ + + + + + + EML PD T+ ++AC+ L + GK
Sbjct: 293 ANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPRPDKVTMLSTIAACAQLGDLSVGK 352
Query: 353 QVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTP---------------- 396
HAY +R G + +I A++DMY KCG + A ++ +
Sbjct: 353 SSHAYVLRNGLEGWDNISNAIIDMYMKCGKREAACKVFEHMPNKTVVTWNSLIAGLVRDG 412
Query: 397 ---------------DLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALS 441
DLVS N M+ A +E I FR + G D ++ + S
Sbjct: 413 DMELAWRIFDEMLERDLVSWNTMIGALVQVSMFEEAIELFREMQNQGIPGDRVTMVGIAS 472
Query: 442 ACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSV 501
AC + G++ + D+ L+ T +VD+ SR G+ A K++ D
Sbjct: 473 ACGYLGALDLAKWVCTYIEKNDIHVDLQLGTALVDMFSRCGDPSSAMHVFKRME-KRDVS 531
Query: 502 MWGALLGGCVSHGNLE 517
W A +G GN E
Sbjct: 532 AWTAAIGVMAMEGNTE 547
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 112/438 (25%), Positives = 205/438 (46%), Gaps = 21/438 (4%)
Query: 98 SSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVN--GLVDVYR-RCGDMLSALKIFSK 154
+++ P+ L SL KE + ITRN S+ +VN L ++ + C M L
Sbjct: 3 TTLFPSSTLLVPASL-KEANP-ITRNS--SSKLLVNCKTLKELKQLHCDMMKKGLLCHKP 58
Query: 155 FSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEA 214
S N++ +++ +G E+ + AR F + G + +N +I GY L D+A
Sbjct: 59 ASNLNKLIASSVQIGTLES--LDYARNAFGDDD--GNMASLFMYNCLIRGYASAGLGDQA 114
Query: 215 FSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVE 274
++ +L+ GI P +TF +L AC+ + +L +G ++H + +GL+ D FV +L+
Sbjct: 115 ILLYVQMLVM-GIVPDKYTFPFLLSACSKILALSEGVQVHGAVLKMGLEGDIFVSNSLIH 173
Query: 275 MYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYT 334
Y + + FD + + +G+ + A+ LF +M + P+ T
Sbjct: 174 FYAECGKVDLGRKLFDGMLERNVVSWTSLINGYSGRDLSKEAVSLFFQMGEAGVEPNPVT 233
Query: 335 VGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS 394
+ ++SAC+ L +E GK+V +Y G + + ALVDMY KCG + AR + +
Sbjct: 234 MVCVISACAKLKDLELGKKVCSYISELGMELSTIMVNALVDMYMKCGDICAARQIFDECA 293
Query: 395 TPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSE 454
+LV N +++ Y H + + +L G RPD ++ LS ++AC G + G
Sbjct: 294 NKNLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPRPDKVTMLSTIAACAQLGDLSVGKS 353
Query: 455 FFDLMAYYDVKPSLKHY----TCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGC 510
Y ++ L+ + ++D+ + G+ A + + +P V W +L+ G
Sbjct: 354 SH----AYVLRNGLEGWDNISNAIIDMYMKCGKREAACKVFEHMP-NKTVVTWNSLIAGL 408
Query: 511 VSHGNLEFGQIAADRLIE 528
V G++E D ++E
Sbjct: 409 VRDGDMELAWRIFDEMLE 426
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 139/296 (46%), Gaps = 10/296 (3%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG + A KVF+ MP + V+WNS++ +G + A + M D LV
Sbjct: 376 MYMKCGKREAACKVFEHMPNKTVVTWNSLIAGLVRDGDMELAWRIFDEMLERD-----LV 430
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ +IG Q EEAI + MQ +G+ + T+ + AC L L L K YI
Sbjct: 431 SWNTMIGALVQVSMFEEAIELFREMQNQGIPGDRVTMVGIASACGYLGALDLAKWVCTYI 490
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCE-NGNVAEA 179
+N + + LVD++ RCGD SA+ +F + K +VS T +G GN A
Sbjct: 491 EKNDIHVDLQLGTALVDMFSRCGDPSSAMHVFKRME-KRDVSAWTAAIGVMAMEGNTEGA 549
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
ELF++M V+ + + ++++ D+ +F + GI P +G ++
Sbjct: 550 IELFNEMLEQKVKPDDVVFVALLTACSHGGSVDQGRQLFWSMEKAHGIRPHIVHYGCMVD 609
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
L + + L ++ ++ + V G+L+ +++++ A A +++ +
Sbjct: 610 LLGRAGLLEEAVD---LIQSMPIEPNDVVWGSLLAACRKHKNVELAHYAAEKLTQL 662
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 107/216 (49%), Gaps = 7/216 (3%)
Query: 315 NAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALV 374
A+ L+ +ML + + PD YT +LSACS + + G QVH ++ G + D+ + +L+
Sbjct: 113 QAILLYVQMLVMGIVPDKYTFPFLLSACSKILALSEGVQVHGAVLKMGLEGDIFVSNSLI 172
Query: 375 DMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHI 434
YA+CG + R + + ++VS +++ Y+ KE ++ F ++ +G P+ +
Sbjct: 173 HFYAECGKVDLGRKLFDGMLERNVVSWTSLINGYSGRDLSKEAVSLFFQMGEAGVEPNPV 232
Query: 435 SFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKI 494
+ + +SAC ++ G + ++ ++ S +VD+ + G++ A + +
Sbjct: 233 TMVCVISACAKLKDLELGKKVCSYISELGMELSTIMVNALVDMYMKCGDICAARQIFDEC 292
Query: 495 PMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELE 530
+ VM+ ++ V H + A+D L+ L+
Sbjct: 293 A-NKNLVMYNTIMSNYVHH------EWASDVLVILD 321
>gi|356514087|ref|XP_003525738.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g01580-like [Glycine max]
Length = 701
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 187/603 (31%), Positives = 311/603 (51%), Gaps = 75/603 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KCG ++DA KVF P+ P++V
Sbjct: 148 LYSKCGQMNDAVKVFTEYPK------------------------------------PDVV 171
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQA-EGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
W+++I G+ QNG E A+ RM E + P+ TL S ACA+L +LG+ HG+
Sbjct: 172 LWTSIITGYEQNGSPELALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFNLGRSVHGF 231
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ R GF + + N ++++Y + G++ A
Sbjct: 232 VKRRGFDTKLCLANSILNLYGK-------------------------------TGSIRIA 260
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
LF +M + + IISW+SM++ Y DN A ++F +++ + IE T S L
Sbjct: 261 ANLFREMPY----KDIISWSSMVACYADNGAETNALNLFNEMIDKR-IELNRVTVISALR 315
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
ACA ++L +GK+IH LA+ G + D V AL++MY + A F+ + + +
Sbjct: 316 ACASSSNLEEGKQIHKLAVNYGFELDITVSTALMDMYLKCFSPENAIELFNRMPKKDVVS 375
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
+ G+ ++ +F MLS PD + IL+A S L +++ +HA+
Sbjct: 376 WAVLFSGYAEIGMAHKSLGVFCNMLSNGTRPDAIALVKILAASSELGIVQQALCLHAFVT 435
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
+ G+D++ IG +L+++YAKC S+ +A +K + D+V+ ++++ AY HG G+E +
Sbjct: 436 KSGFDNNEFIGASLIELYAKCSSIDNANKVFKGLRHTDVVTWSSIIAAYGFHGQGEEALK 495
Query: 420 HFRRILA-SGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDL 477
++ S +P+ ++F+S LSAC HAG I+ G + F +M Y + P+++HY MVDL
Sbjct: 496 LSHQMSNHSDVKPNDVTFVSILSACSHAGLIEEGIKMFHVMVNEYQLMPNIEHYGIMVDL 555
Query: 478 LSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNY 537
L R GEL +A + I +PM +WGALLG C H N++ G++AA L L+PN+ G Y
Sbjct: 556 LGRMGELDKALDMINNMPMQAGPHVWGALLGACRIHQNIKIGELAALNLFLLDPNHAGYY 615
Query: 538 VMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
+L+N++ W D A+ R +K+ R+ K G S +E ++E+H F ASDR H S++IY
Sbjct: 616 TLLSNIYCVDKNWHDAAKLRTLIKENRLKKIVGQSMVEIKNEVHSFIASDRFHGESDQIY 675
Query: 598 TII 600
++
Sbjct: 676 EML 678
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/416 (23%), Positives = 180/416 (43%), Gaps = 43/416 (10%)
Query: 97 LSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFS 156
L +L C K+S+ + H + G + FVV L +Y R + A K+F
Sbjct: 7 LVKLLETCC--SKISI-TQLHSQCLKVGLALDSFVVTKLNVLYARYASLCHAHKLFE--- 60
Query: 157 IKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFS 216
E C T+ + WN+++ Y + E S
Sbjct: 61 ---ETPCKTVYL-----------------------------WNALLRSYFLEGKWVETLS 88
Query: 217 MFRDLLMRDGIE--PTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVE 274
+F + E P ++T L +C+ + L GK IH + + SD FVG AL+E
Sbjct: 89 LFHQMNADAVTEERPDNYTVSIALKSCSGLQKLELGKMIHGF-LKKKIDSDMFVGSALIE 147
Query: 275 MYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLD-LTPDIY 333
+Y + + A F E + +L G+E N A+ FS M+ L+ ++PD
Sbjct: 148 LYSKCGQMNDAVKVFTEYPKPDVVLWTSIITGYEQNGSPELALAFFSRMVVLEQVSPDPV 207
Query: 334 TVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRI 393
T+ SAC+ L+ G+ VH + R G+D+ + + +++++Y K GS++ A ++ +
Sbjct: 208 TLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCLANSILNLYGKTGSIRIAANLFREM 267
Query: 394 STPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGS 453
D++S ++M+ YA +G + F ++ + ++ +SAL AC + +++ G
Sbjct: 268 PYKDIISWSSMVACYADNGAETNALNLFNEMIDKRIELNRVTVISALRACASSSNLEEGK 327
Query: 454 EFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
+ L Y + + T ++D+ + A E ++P D V W L G
Sbjct: 328 QIHKLAVNYGFELDITVSTALMDMYLKCFSPENAIELFNRMP-KKDVVSWAVLFSG 382
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 109/242 (45%), Gaps = 12/242 (4%)
Query: 335 VGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS 394
V ++ + CS ++ Q+H+ ++ G D + T L +YA+ SL HA ++
Sbjct: 8 VKLLETCCSKISI----TQLHSQCLKVGLALDSFVVTKLNVLYARYASLCHAHKLFEETP 63
Query: 395 TPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGF---RPDHISFLSALSACVHAGSIKT 451
+ NA+L +Y + G E ++ F ++ A RPD+ + AL +C ++
Sbjct: 64 CKTVYLWNALLRSYFLEGKWVETLSLFHQMNADAVTEERPDNYTVSIALKSCSGLQKLEL 123
Query: 452 GSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCV 511
G + + + + +++L S+ G++ +A + + P PD V+W +++ G
Sbjct: 124 GKMIHGFLKK-KIDSDMFVGSALIELYSKCGQMNDAVKVFTEYP-KPDVVLWTSIITGYE 181
Query: 512 SHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSD--LARTRQKMKDRRMHKSP 569
+G+ E R++ LE + + V L + + + SD L R+ RR +
Sbjct: 182 QNGSPELALAFFSRMVVLE-QVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTK 240
Query: 570 GC 571
C
Sbjct: 241 LC 242
>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 173/546 (31%), Positives = 292/546 (53%), Gaps = 39/546 (7%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLE-PNARTLSSVLPACARLQKLSLGKEF 116
++++W++++ F + A+ M P+ T S+L CA L + +GK
Sbjct: 42 DVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVL 101
Query: 117 HGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNV 176
HG + + S+ ++ L+++Y CGD+ SA
Sbjct: 102 HGQVVKYMLHSDLYIETTLLNMYAACGDLKSA---------------------------- 133
Query: 177 AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGS 236
R LF++M H R + W SMISGY+ N +EA +++ + DG P T +
Sbjct: 134 ---RFLFERMGH----RNKVVWTSMISGYMKNHCPNEALLLYKKM-EEDGFSPDEVTMAT 185
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
++ ACA++ L G ++H+ + ++ +G ALV MY + DL A+ FD++ + +
Sbjct: 186 LVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKD 245
Query: 297 NLLGKMKEDGFEPNVYTWNAMQLFSEMLS-LDLTPDIYTVGIILSACSSLATMERGKQVH 355
G+ N + A+QLF E+ ++ P+ T+ ++SAC+ L +E G+ VH
Sbjct: 246 VYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVH 305
Query: 356 AYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGK 415
Y R V + +L+DM++KCG + A+ + +S DL+S N+M+ A+HG G+
Sbjct: 306 DYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGLALHGLGR 365
Query: 416 EGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSE-FFDLMAYYDVKPSLKHYTCM 474
E +A F + + +PD I+F+ L+AC HAG ++ G + F+++ A Y V+ +HY CM
Sbjct: 366 EALAQFHLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCM 425
Query: 475 VDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNT 534
VDLL RAG L EA EFI+ +P+ PD +WG++LG C + NLE G+ AA L+ELEP N
Sbjct: 426 VDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGACRVYNNLELGEEAARCLLELEPTND 485
Query: 535 GNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSE 594
G Y++L+N++A W+++ + R+ M ++ + K+PGCS + + H F A D SH
Sbjct: 486 GVYILLSNIYARRKMWNEVKKVRELMNEKGIQKTPGCSSVVIDNIAHSFLAGDCSHPEIA 545
Query: 595 EIYTII 600
EI ++
Sbjct: 546 EISIML 551
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 92/378 (24%), Positives = 166/378 (43%), Gaps = 45/378 (11%)
Query: 13 KVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQN 72
+V K M D +++ AA G + A ERM N V W+++I G+ +N
Sbjct: 104 QVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGH-----RNKVVWTSMISGYMKN 158
Query: 73 GYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVV 132
EA+ + +M+ +G P+ T+++++ ACA L+ L +G + H +I +
Sbjct: 159 HCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLG 218
Query: 133 NGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQ 192
+ LV++Y +CGD+ +A ++F + S K+ + + +I GY +N EA +L
Sbjct: 219 SALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQL---------- 268
Query: 193 RGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKE 252
FR++ + P T +V+ ACA + L G+
Sbjct: 269 -------------------------FREVAGGSNMRPNEVTILAVISACAQLGDLETGRW 303
Query: 253 IHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVY 312
+H + +L++M+ + D+ AA+ FD + + + +G +
Sbjct: 304 VHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGLALHGL 363
Query: 313 TWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDV---HI 369
A+ F M + DL PD T +L+ACS ++ GK++ Y I Y + H
Sbjct: 364 GREALAQFHLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLF-YEIEALYGVRLKSEHY 422
Query: 370 GTALVDMYAKCGSLKHAR 387
G +VD+ + G L AR
Sbjct: 423 G-CMVDLLCRAGLLAEAR 439
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 144/342 (42%), Gaps = 82/342 (23%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG L A++VF + ++D +
Sbjct: 224 MYAKCGDLKTARQVFDQLSDKD------------------------------------VY 247
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEG--LEPNARTLSSVLPACARLQKLSLGKEFHG 118
+WSA+I G+ +N EA+ LFR A G + PN T+ +V+ ACA+L L G+ H
Sbjct: 248 AWSALIFGYVKNNRSTEAL-QLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHD 306
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
YITR + + N L+D++ +CGD+ +A +IF S K+ +S N+++ G +G E
Sbjct: 307 YITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGLALHGLGRE 366
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFR------------------- 219
A F M+ +Q I++ +++ L E +F
Sbjct: 367 ALAQFHLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMV 426
Query: 220 DLLMRDG-------------IEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDT 266
DLL R G ++P +GS+L AC N+L G+E + L +D
Sbjct: 427 DLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGACRVYNNLELGEEAARCLLELEPTNDG 486
Query: 267 FVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFE 308
+Y ++ A + ++E++ + L M E G +
Sbjct: 487 --------VYILLSNIYARRKMWNEVKKVREL---MNEKGIQ 517
>gi|449438512|ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Cucumis sativus]
gi|449526872|ref|XP_004170437.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Cucumis sativus]
Length = 667
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 172/507 (33%), Positives = 283/507 (55%), Gaps = 18/507 (3%)
Query: 97 LSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFS 156
S +L +C +L L GK+ H I +G + F+ N L++ Y + G S+L +FS
Sbjct: 65 FSHLLQSCIKLGSLFGGKQVHSLIITSGGSKDKFISNHLLNFYSKLGQFKSSLVLFSNMP 124
Query: 157 IKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFS 216
+N +S N +I GY + G++ A++LFD+M +R I +WN+MI+G +A S
Sbjct: 125 RRNVMSFNILINGYLQLGDLESAQKLFDEMS----ERNIATWNAMIAGLTQFEFNKQALS 180
Query: 217 MFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMY 276
+F+++ G P FT GSVL CA + SL G+E+HA + G + + VG +L MY
Sbjct: 181 LFKEMYGL-GFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMY 239
Query: 277 CRYQDL-----VAAQMAFDEIENIENLLGKMKEDGFEPNVYT-WNAMQLFSEMLSLDLTP 330
+ L + M + L+ ++G V +N M++ P
Sbjct: 240 IKSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKM------AGFRP 293
Query: 331 DIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAY 390
D T +LSACS LAT+ +G+Q+HA I+ G S + + ++L+ MY++ G L+ + A+
Sbjct: 294 DKITFVSVLSACSELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAF 353
Query: 391 KRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIK 450
D+V ++M+ AY HG G+E + F ++ + ++FLS L AC H+G +
Sbjct: 354 VDRENFDVVLWSSMIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSGLKE 413
Query: 451 TGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
G+E+FDLM Y +KP ++HYTC+VDLL RAG L EA I+ +P+ PD ++W LL
Sbjct: 414 KGTEYFDLMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTLLAA 473
Query: 510 CVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSP 569
C H E + ++ +I+L+P + +YV+L+N+ A A W ++++ R+ M+DR + K P
Sbjct: 474 CKLHKEAEMAERISEEIIKLDPLDAASYVLLSNIHASARNWLNVSQIRKAMRDRSVRKEP 533
Query: 570 GCSWIEDRDEIHKFRASDRSHDRSEEI 596
G SW+E ++ +H+F D+SH + EI
Sbjct: 534 GISWLELKNLVHQFSMGDKSHPQYFEI 560
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 108/416 (25%), Positives = 181/416 (43%), Gaps = 51/416 (12%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y K G + +F MP R+ +S+N ++ G + A + + MS N+ +
Sbjct: 107 YSKLGQFKSSLVLFSNMPRRNVMSFNILINGYLQLGDLESAQKLFDEMSE-----RNIAT 161
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W+A+I G TQ ++++A+ + M G P+ TL SVL CA L+ L G+E H +
Sbjct: 162 WNAMIAGLTQFEFNKQALSLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLL 221
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
+ GF + V + L +Y + G + K+ I+ V+ NT+I G +NG E
Sbjct: 222 KCGFELSSVVGSSLAHMYIKSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLN 281
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
++ M+ G FR P TF SVL AC
Sbjct: 282 QYNMMKMAG---------------------------FR---------PDKITFVSVLSAC 305
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK 301
+++ +L +G++IHA I G S V +L+ MY R L + AF + EN + +L
Sbjct: 306 SELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDRENFDVVLWS 365
Query: 302 MKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ-----VHA 356
+ + A++LF +M L + + T +L ACS E+G + V
Sbjct: 366 SMIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGTEYFDLMVKK 425
Query: 357 YAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST-PDLVSQNAMLTAYAMH 411
Y ++ + T +VD+ + G L+ A + + PD + +L A +H
Sbjct: 426 YKLK----PRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTLLAACKLH 477
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 101/229 (44%), Gaps = 36/229 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K GSL D +K+ K MP R V+WN++
Sbjct: 238 MYIKSGSLSDGEKLIKSMPIRTVVAWNTL------------------------------- 266
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
I G QNG EE + M+ G P+ T SVL AC+ L L G++ H +
Sbjct: 267 -----IAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFVSVLSACSELATLGQGQQIHAEV 321
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G S VV+ L+ +Y R G + ++K F + V +++I Y +G EA
Sbjct: 322 IKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDRENFDVVLWSSMIAAYGFHGRGEEAL 381
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEP 229
ELF QME L ++ +++ S++ + L ++ F ++ + ++P
Sbjct: 382 ELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGTEYFDLMVKKYKLKP 430
>gi|22093801|dbj|BAC07088.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 643
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 175/540 (32%), Positives = 288/540 (53%), Gaps = 21/540 (3%)
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNAR---TLSSVLPACARLQKLSLGKEFH 117
SW+ I G AI + +M+A + P + +L + L +CA L +L H
Sbjct: 14 SWAYQIRMAASQGQFLHAISLFLQMRAS-VAPRSSVPASLPAALKSCAGLGLCTLAASLH 72
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
R+G ++ F N L+++ C + F E G E+
Sbjct: 73 ALAIRSGSFADRFTANALLNL---CIKLPGFHHPFGTNGPSGE--------GGLESAAYE 121
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
R++FD+M ++R +SWN++I G ++ + EA SM R++ RDG P +FT +V
Sbjct: 122 SMRKVFDEM----LERDAVSWNTLILGCAEHKRHQEALSMVREMW-RDGFMPDTFTLSTV 176
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
L A+ +++G +H AI G +D FVG +L++MY + + FD + +
Sbjct: 177 LPIFAECADIKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDA 236
Query: 298 LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAY 357
+L G+ N A+ +F ML + P T ++ A +L+ + GKQ+HAY
Sbjct: 237 VLWNSMLAGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAY 296
Query: 358 AIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEG 417
IR ++ ++ I ++L+DMY KCG++ AR + I +PD+VS AM+ YA+HG E
Sbjct: 297 LIRARFNDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEA 356
Query: 418 IAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVD 476
F R+ +P+HI+FL+ L+AC HAG + G ++F+ M+ Y PSL+H + D
Sbjct: 357 FVLFERMELGNVKPNHITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAALAD 416
Query: 477 LLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGN 536
L RAG+L EAY FI ++ + P S +W LL C H N + A ++ ELEP + G+
Sbjct: 417 TLGRAGDLDEAYNFISEMKIKPTSSVWSTLLRACRVHKNTVLAEEVAKKIFELEPKSMGS 476
Query: 537 YVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEI 596
+V+L+N+++ +GRW++ A+ R+ M+ + M K P CSWIE ++++H F A D+SH + I
Sbjct: 477 HVILSNMYSASGRWNEAAQLRKSMRIKGMKKEPACSWIEVKNKLHVFIAHDKSHPWYDRI 536
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 156/328 (47%), Gaps = 37/328 (11%)
Query: 60 VSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
VSW+ +I G ++ +EA+ M+ M +G P+ TLS+VLP A + G HGY
Sbjct: 136 VSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMVVHGY 195
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+NGF ++ FV + L+D+Y C M ++K+F FS + V N+++ GY +NG+V EA
Sbjct: 196 AIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQNGSVEEA 255
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
+F +M GV+ P TF S++
Sbjct: 256 LGIFRRMLQAGVR------------------------------------PVPVTFSSLIP 279
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
A +++ LR GK++HA I + F+ +L++MYC+ ++ A+ F+ I++ + +
Sbjct: 280 AFGNLSLLRLGKQLHAYLIRARFNDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVS 339
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG-KQVHAYA 358
G+ + T A LF M ++ P+ T +L+ACS ++ G K ++ +
Sbjct: 340 WTAMIMGYALHGPTTEAFVLFERMELGNVKPNHITFLAVLTACSHAGLVDNGWKYFNSMS 399
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHA 386
+ G+ + AL D + G L A
Sbjct: 400 NQYGFVPSLEHCAALADTLGRAGDLDEA 427
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 104/230 (45%), Gaps = 36/230 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY C +D + KVF + D V WNS++ A NG V EAL
Sbjct: 214 MYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQNGSVEEAL----------------- 256
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
G+ RM G+ P T SS++PA L L LGK+ H Y+
Sbjct: 257 -------------------GIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYL 297
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R F N F+ + L+D+Y +CG++ A ++F+ + VS +I+GY +G EA
Sbjct: 298 IRARFNDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAF 357
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPT 230
LF++ME V+ I++ ++++ L D + F + + G P+
Sbjct: 358 VLFERMELGNVKPNHITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPS 407
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 107/245 (43%), Gaps = 19/245 (7%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG++D A++VF + D VSW +++ A +G EA ERM L N PN +
Sbjct: 315 MYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERM-ELGNVKPNHI 373
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
++ AV+ + G + M + G P+ +++ R L E + +
Sbjct: 374 TFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAALADTLGRAGDLD---EAYNF 430
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSK-FSIKNEVSCNTIIVG--YCENGNV 176
I+ V + L+ R + + A ++ K F ++ + + +I+ Y +G
Sbjct: 431 ISEMKIKPTSSVWSTLLRACRVHKNTVLAEEVAKKIFELEPKSMGSHVILSNMYSASGRW 490
Query: 177 AEARELFDQMEHLGVQR-GIISW-------NSMISGYVDNSLYD---EAFSMFRDLLMRD 225
EA +L M G+++ SW + I+ + YD +A +++ + ++R
Sbjct: 491 NEAAQLRKSMRIKGMKKEPACSWIEVKNKLHVFIAHDKSHPWYDRIIDALNVYSEQMIRQ 550
Query: 226 GIEPT 230
G P
Sbjct: 551 GYVPN 555
>gi|326522845|dbj|BAJ88468.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 776
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 186/615 (30%), Positives = 308/615 (50%), Gaps = 87/615 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y +C S DA+++F MP++ N+V
Sbjct: 120 VYMRCASSRDARRLFDGMPDK------------------------------------NVV 143
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+A+I G T N A+ + M G P+ TL +L AC+ +++ LG++ HGY
Sbjct: 144 TWTALITGHTLNSEPALALEVFVEMLELGRYPSHYTLGGMLSACSAARRIDLGQQVHGYS 203
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G + + N L +Y + GD+ S L+ F KN
Sbjct: 204 IKYGADTITSMGNSLCRLYCKSGDLESGLRAFKGTPDKN--------------------- 242
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLY-DEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
+I+W +MIS ++ Y D S+F D+L G+ P FT SV+
Sbjct: 243 --------------VITWTTMISSCAEDENYLDLGLSLFLDML-EGGVMPNEFTLTSVMS 287
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDE-------- 291
C + GK++ A +G +++ V + + +Y R + A F+E
Sbjct: 288 LCGARLDMSLGKQVQAFCYKVGCEANLPVKNSTMYLYLRKGETDEAMRLFEEMDSSSIIT 347
Query: 292 ----IENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLAT 347
I ++ K+D + A++LF +++ +L PD++T ILS CS++
Sbjct: 348 WNAMISGYAQIMDSAKDD-LHARSRGFQALKLFRDLVRSELKPDLFTFSSILSVCSAMMA 406
Query: 348 MERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTA 407
+E+G+Q+HA I+ G SDV + +ALV+MY KCGS++ A A+ + T V+ +M++
Sbjct: 407 LEQGEQIHANTIKTGCLSDVVVNSALVNMYNKCGSIECATKAFVEMPTRTPVTWTSMISG 466
Query: 408 YAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKP 466
Y+ HG ++ I F ++ SG RP+ I+F+S LSAC +AG ++ +FD+M Y ++P
Sbjct: 467 YSQHGRSQDAIQLFEDMVLSGARPNEITFVSLLSACSYAGLVEEAERYFDMMRNEYHIEP 526
Query: 467 SLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRL 526
+ HY CMVD+ R G L +A+ FIK+ P+ +W +L+ GC SHGN+E AADRL
Sbjct: 527 LVDHYGCMVDMFVRLGRLDDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADRL 586
Query: 527 IELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRAS 586
+EL+P YV+L N++ GRW D+AR R+ K + SWI RD+++ FRA
Sbjct: 587 LELKPKVIETYVLLLNMYISTGRWRDVARVRKLAKHEDVGVLRDRSWIAIRDKVYFFRAD 646
Query: 587 DRSHDRSEEIYTIID 601
D +H ++ E+Y +++
Sbjct: 647 DMTHPQATELYQLLE 661
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 119/512 (23%), Positives = 220/512 (42%), Gaps = 78/512 (15%)
Query: 76 EEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGL 135
+EA+GML +G + +L C L + HG++ + G ++ FV L
Sbjct: 62 QEAMGML----RDGQTVQSAMYVPLLHRCVEAGGLGAARALHGHMVKTGTAADMFVATSL 117
Query: 136 VDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGI 195
V+VY RC A ++F KN V+ +I G+ N A A E+F +M LG
Sbjct: 118 VNVYMRCASSRDARRLFDGMPDKNVVTWTALITGHTLNSEPALALEVFVEMLELGRY--- 174
Query: 196 ISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHA 255
P+ +T G +L AC+ + G+++H
Sbjct: 175 ---------------------------------PSHYTLGGMLSACSAARRIDLGQQVHG 201
Query: 256 LAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL--GKMKEDGFEPNVYT 313
+I G + T +G +L +YC+ DL + AF + +N++ M E Y
Sbjct: 202 YSIKYGADTITSMGNSLCRLYCKSGDLESGLRAFKGTPD-KNVITWTTMISSCAEDENYL 260
Query: 314 WNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTAL 373
+ LF +ML + P+ +T+ ++S C + M GKQV A+ + G ++++ + +
Sbjct: 261 DLGLSLFLDMLEGGVMPNEFTLTSVMSLCGARLDMSLGKQVQAFCYKVGCEANLPVKNST 320
Query: 374 VDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYA---------MHG--HGKEGIAHFR 422
+ +Y + G A ++ + + +++ NAM++ YA +H G + + FR
Sbjct: 321 MYLYLRKGETDEAMRLFEEMDSSSIITWNAMISGYAQIMDSAKDDLHARSRGFQALKLFR 380
Query: 423 RILASGFRPDHISFLSALSAC-----------VHAGSIKTGSEFFDLMAYYDVKPSLKHY 471
++ S +PD +F S LS C +HA +IKTG D++
Sbjct: 381 DLVRSELKPDLFTFSSILSVCSAMMALEQGEQIHANTIKTGC-LSDVVV----------N 429
Query: 472 TCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFG-QIAADRLIELE 530
+ +V++ ++ G + A + ++P V W +++ G HG + Q+ D ++
Sbjct: 430 SALVNMYNKCGSIECATKAFVEMPTR-TPVTWTSMISGYSQHGRSQDAIQLFEDMVLSGA 488
Query: 531 PNNTGNYVMLANLFAYAGRWSDLARTRQKMKD 562
N +V L + +YAG + R M++
Sbjct: 489 RPNEITFVSLLSACSYAGLVEEAERYFDMMRN 520
>gi|297736478|emb|CBI25349.3| unnamed protein product [Vitis vinifera]
Length = 1241
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 188/606 (31%), Positives = 307/606 (50%), Gaps = 83/606 (13%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K GS++DAKKVF + L++ L N
Sbjct: 693 MYAKSGSVEDAKKVFD---------------------------QVLDKEVELRN------ 719
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
A+I F NG +A+G+ +M+A ++ T+SS+L C+ + G+ H +
Sbjct: 720 ---AMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEV 776
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ SN + + L+ +Y +CG A +F +++K
Sbjct: 777 IKRSMQSNVAIQSALLTMYYKCGSTEDADSVF--YTMK---------------------- 812
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+R +++W SMI+G+ N + +A +FR + ++G++ S SV+ A
Sbjct: 813 -----------ERDVVAWGSMIAGFCQNRRFKDALDLFRAM-EKEGVKADSDVMTSVISA 860
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
+ ++ G IH AI GL+SD FV +LV+MY ++ +A+M F + N +NL+
Sbjct: 861 GLGLENVELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMPN-KNLVA 919
Query: 301 KMKEDGFEPNVYTWN-----AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVH 355
+ Y+WN ++ L ++L D ++ +L A SS+A + +GK +H
Sbjct: 920 W----NSMISCYSWNGLPEMSINLLPQILQHGFYLDSVSITTVLVAVSSVAALLKGKTLH 975
Query: 356 AYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGK 415
AY IR SD+ + AL+DMY KCG LK+A+L ++ + +LV+ N+M+ Y HG+ +
Sbjct: 976 AYQIRLQIPSDLQVENALIDMYVKCGCLKYAQLIFENMPRRNLVTWNSMIAGYGSHGNCE 1035
Query: 416 EGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCM 474
E + F+ + S PD ++FL+ +++C H+G ++ G F LM Y V+P ++HY +
Sbjct: 1036 EAVRLFKEMKRSETAPDEVTFLALITSCSHSGMVEEGLNLFQLMRIEYGVEPRMEHYASV 1095
Query: 475 VDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNT 534
VDLL RAG L +AY FI+ +P+ D +W LL C +H N+E G++ AD L+++EP
Sbjct: 1096 VDLLGRAGRLDDAYSFIRGMPIDADRSVWLCLLFACRAHRNMELGELVADNLLKMEPARG 1155
Query: 535 GNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSE 594
NYV L NL+ W A R MK R + KSPGCSWIE ++ + F + D S R
Sbjct: 1156 SNYVPLLNLYGEVEMWDRAANLRASMKGRGLKKSPGCSWIEVKNRVDVFFSGDSSSTRRI 1215
Query: 595 EIYTII 600
EIY +
Sbjct: 1216 EIYKTL 1221
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 122/480 (25%), Positives = 224/480 (46%), Gaps = 37/480 (7%)
Query: 37 GLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNART 96
GL+ AL+ ++MS + P++ W+ VI G+ + G+ EE + RMQ G+ P+ +
Sbjct: 490 GLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYGHFEEGLAQFCRMQELGIRPDGYS 549
Query: 97 LSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFS 156
LS VL C RL G++ HGYI RN F +P++ L+ +Y C + A +F K
Sbjct: 550 LSIVLGICNRLSWYMAGRQIHGYIIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKL- 608
Query: 157 IKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFS 216
EN + I++WN MI G+V+N +++++
Sbjct: 609 ---------------EN------------------RSNIVAWNVMIGGFVENGMWEKSLE 635
Query: 217 MFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMY 276
++ L + + S +F AC+ L G+++H I + Q D +V +L+ MY
Sbjct: 636 LY-SLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMY 694
Query: 277 CRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVG 336
+ + A+ FD++ + E L F N ++A+ L+++M + + D +T+
Sbjct: 695 AKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTIS 754
Query: 337 IILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTP 396
+LS CS + + + G+ VHA I+ S+V I +AL+ MY KCGS + A + +
Sbjct: 755 SLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKER 814
Query: 397 DLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFF 456
D+V+ +M+ + + K+ + FR + G + D S +SA + +++ G
Sbjct: 815 DVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHLIH 874
Query: 457 DLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNL 516
++ + +VD+ S+ G E+ E + + V W +++ C S L
Sbjct: 875 GFAIKRGLESDVFVACSLVDMYSKFG-FAESAEMVFSSMPNKNLVAWNSMI-SCYSWNGL 932
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 99/413 (23%), Positives = 167/413 (40%), Gaps = 62/413 (15%)
Query: 202 ISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALG 261
I V Y +A + + FTF S+L CA +++L G+ IHA + +G
Sbjct: 413 IKALVQQGKYSQALELHSKT-PHSALTTAKFTFPSLLKTCASLSNLYHGRTIHASIVTMG 471
Query: 262 LQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKED-GFEPNVYTWN----- 315
LQSD ++ +L+ MY + L +A FD KM E P++ WN
Sbjct: 472 LQSDPYIATSLINMYVKCGLLGSALQVFD----------KMSESRDSAPDITVWNPVIDG 521
Query: 316 ---------AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSD 366
+ F M L + PD Y++ I+L C+ L+ G+Q+H Y IR ++ D
Sbjct: 522 YFKYGHFEEGLAQFCRMQELGIRPDGYSLSIVLGICNRLSWYMAGRQIHGYIIRNMFEGD 581
Query: 367 VHIGTALVDMYAKCGSLKHARLAYKRIST-PDLVSQNAMLTAYAMHGHGKEGIAHFRRIL 425
++ TAL+ MY+ C A + ++ ++V+ N M+ + +G ++ + +
Sbjct: 582 PYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKSLELYSLAK 641
Query: 426 ASGFRPDHISFLSALSACVHAGSIKTGSE---------FFD-------LMAYYDVKPSLK 469
+ SF A +AC H + G + F D L+ Y S++
Sbjct: 642 NENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVE 701
Query: 470 HYTCMVD-LLSRAGEL-----------GEAYEFI------KKIPMAPDSVMWGALLGGCV 511
+ D +L + EL G AY+ + K DS +LL GC
Sbjct: 702 DAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCS 761
Query: 512 SHGNLEFGQIAADRLIELE-PNNTGNYVMLANLFAYAGRWSDLARTRQKMKDR 563
G+ +FG+ +I+ +N L ++ G D MK+R
Sbjct: 762 VVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKER 814
>gi|6016735|gb|AAF01561.1|AC009325_31 hypothetical protein [Arabidopsis thaliana]
Length = 641
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 184/568 (32%), Positives = 297/568 (52%), Gaps = 45/568 (7%)
Query: 37 GLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRM-QAEGLEPNAR 95
G ++EAL + + E P++V+WS+++ GF +NG +A+ RM A + P+
Sbjct: 91 GRMIEALRMFDEL-----EKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRV 145
Query: 96 TLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKF 155
TL +++ AC +L LG+ HG++ R GF ++ +VN L++ Y + A+ +F
Sbjct: 146 TLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMI 205
Query: 156 SIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAF 215
+ ++ +ISW+++I+ YV N EA
Sbjct: 206 A-----------------------------------EKDVISWSTVIACYVQNGAAAEAL 230
Query: 216 SMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEM 275
+F D+ M DG EP T VL ACA + L +G++ H LAI GL+++ V ALV+M
Sbjct: 231 LVFNDM-MDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDM 289
Query: 276 YCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLT-PDIYT 334
Y + A F I + + GF N +++ FS ML + T PD
Sbjct: 290 YMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAIL 349
Query: 335 VGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS 394
+ +L +CS L +E+ K H+Y I+ G+DS+ IG +LV++Y++CGSL +A + I+
Sbjct: 350 MVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIA 409
Query: 395 TPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASG-FRPDHISFLSALSACVHAGSIKTGS 453
D V +++T Y +HG G + + F ++ S +P+ ++FLS LSAC HAG I G
Sbjct: 410 LKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGL 469
Query: 454 EFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVS 512
F LM Y + P+L+HY +VDLL R G+L A E K++P +P + G LLG C
Sbjct: 470 RIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRI 529
Query: 513 HGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCS 572
H N E + A +L ELE N+ G Y++++N++ G W ++ + R +K R + K S
Sbjct: 530 HQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAES 589
Query: 573 WIEDRDEIHKFRASDRSHDRSEEIYTII 600
IE R ++H+F A D H E +Y ++
Sbjct: 590 LIEIRRKVHRFVADDELHPEKEPVYGLL 617
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 179/369 (48%), Gaps = 8/369 (2%)
Query: 192 QRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGK 251
+R + WN+++ ++E F + RD +P +FT L AC ++ + G+
Sbjct: 3 KRSLYQWNTLLKSLSREKQWEEVLYHFSHMF-RDEEKPDNFTLPVALKACGELREVNYGE 61
Query: 252 EIHALAIA-LGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPN 310
IH + L SD +VG +L+ MY + ++ A FDE+E + + GFE N
Sbjct: 62 MIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKN 121
Query: 311 VYTWNAMQLFSEM-LSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHI 369
+ A++ F M ++ D+TPD T+ ++SAC+ L+ G+ VH + IR G+ +D+ +
Sbjct: 122 GSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSL 181
Query: 370 GTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGF 429
+L++ YAK + K A +K I+ D++S + ++ Y +G E + F ++ G
Sbjct: 182 VNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGT 241
Query: 430 RPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYE 489
P+ + L L AC A ++ G + +L ++ +K T +VD+ + EAY
Sbjct: 242 EPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYA 301
Query: 490 FIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGR 549
+IP D V W AL+ G +G + I ++ LE N + +++ + G
Sbjct: 302 VFSRIP-RKDVVSWVALISGFTLNG-MAHRSIEEFSIMLLENNTRPDAILMVKVL---GS 356
Query: 550 WSDLARTRQ 558
S+L Q
Sbjct: 357 CSELGFLEQ 365
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 103/394 (26%), Positives = 171/394 (43%), Gaps = 47/394 (11%)
Query: 27 NSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQ 86
NS++ A + EA+ + ++ D ++SWS VI + QNG EA+ + M
Sbjct: 183 NSLLNCYAKSRAFKEAVNLFKMIAEKD-----VISWSTVIACYVQNGAAAEALLVFNDMM 237
Query: 87 AEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDML 146
+G EPN T+ VL ACA L G++ H R G + V LVD+Y +C
Sbjct: 238 DDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPE 297
Query: 147 SALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYV 206
A +FS+ K+ VS +I G+ NG M H +
Sbjct: 298 EAYAVFSRIPRKDVVSWVALISGFTLNG-----------MAHRSI--------------- 331
Query: 207 DNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDT 266
E FS+ +L+ + P + VL +C+++ L + K H+ I G S+
Sbjct: 332 ------EEFSI---MLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNP 382
Query: 267 FVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEML-S 325
F+G +LVE+Y R L A F+ I + ++ G+ + A++ F+ M+ S
Sbjct: 383 FIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKS 442
Query: 326 LDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR-CGYDSDVHIGTALVDMYAKCGSLK 384
++ P+ T ILSACS + G ++ + ++ LVD+ + G L
Sbjct: 443 SEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLD 502
Query: 385 HARLAYKRI---STPDLVSQNAMLTAYAMHGHGK 415
A KR+ TP ++ +L A +H +G+
Sbjct: 503 TAIEITKRMPFSPTPQIL--GTLLGACRIHQNGE 534
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 108/226 (47%), Gaps = 37/226 (16%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC S ++A VF +P +D VSW ++++ NG+ ++E M +N P+ +
Sbjct: 289 MYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAI 348
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
V+G ++ G+ E+A K FH Y+
Sbjct: 349 LMVKVLGSCSELGFLEQA-----------------------------------KCFHSYV 373
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ GF SNPF+ LV++Y RCG + +A K+F+ ++K+ V ++I GY +G +A
Sbjct: 374 IKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKAL 433
Query: 181 ELFDQM-EHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRD 225
E F+ M + V+ +++ S++S L E +F+ L++ D
Sbjct: 434 ETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFK-LMVND 478
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 81/191 (42%), Gaps = 43/191 (22%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y +CGSL +A KVF + +D V W S++T +G +ALE M PN V
Sbjct: 391 LYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEV 450
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEG--LEPNARTLSSVLPACARLQKLSLGKEFHG 118
++ +++ + G E + +F++ L PN L+ ++
Sbjct: 451 TFLSILSACSHAGLIHEGL-RIFKLMVNDYRLAPN-------------LEHYAV------ 490
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYC---ENGN 175
LVD+ R GD+ +A++I + ++G C +NG
Sbjct: 491 ----------------LVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGE 534
Query: 176 VAE--ARELFD 184
+AE A++LF+
Sbjct: 535 MAETVAKKLFE 545
>gi|87241511|gb|ABD33369.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 609
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 179/549 (32%), Positives = 296/549 (53%), Gaps = 39/549 (7%)
Query: 57 PNLVSWSAVIGGFTQNGYDEEAIGMLF-RMQAEGLEPNARTLSSVLPACARLQKLSLGKE 115
PN +++ ++ T +D L+ +M+ + PN T V ACA L+++ + +
Sbjct: 79 PNDYAFNIMLRATTTTWHDYPLTLHLYHQMKTLNISPNNFTFPFVFLACANLEEIRMARL 138
Query: 116 FHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGN 175
H + + G ++ VN +V +Y RCG ENG
Sbjct: 139 AHCEVFKLGLDNDHHTVNSMVTMYFRCG----------------------------ENG- 169
Query: 176 VAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFG 235
AR++FD++ ++ ++SWNS++SGY EA +F L G EP +
Sbjct: 170 --VARKVFDEI----TEKDLVSWNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEMSLV 223
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
SVL AC ++ L G+ + + G++ ++++G AL+ MY + +LV+++ FD + +
Sbjct: 224 SVLGACGELGDLELGRWVEGFVVERGMKVNSYIGSALISMYSKCGELVSSRRIFDGMPSR 283
Query: 296 ENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVH 355
+ + + N A+ LF M + P+ T+ +LSAC+S+ ++ GKQ+
Sbjct: 284 DFITWNAAISAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALDLGKQMD 343
Query: 356 AYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGK 415
YA G D+ + TAL+DMYAKCGSL+ A+ + + + S NAM++A A HG K
Sbjct: 344 EYATHRGLQHDIFVATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISALASHGKAK 403
Query: 416 EGIAHFRRILASG--FRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYT 472
E ++ F R+ G RP+ I+F+S LSACVHAG + G FD+M+ + + P ++HY+
Sbjct: 404 EALSLFERMSDEGGSARPNDITFVSLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYS 463
Query: 473 CMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPN 532
CMVDLLSRAG L EA++ I+K+P PD+V GAL C N++ G+ L+EL+P+
Sbjct: 464 CMVDLLSRAGHLYEAWDVIEKMPEKPDNVTLGALHSACQRKKNVDIGERVIQMLLELDPS 523
Query: 533 NTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDR 592
N+GNY++ + ++ W D AR R M++ + K+PGCSWIE +++ +F + D
Sbjct: 524 NSGNYIISSKIYENLNMWDDAARMRALMRENGVTKTPGCSWIEVGNQLREFLSGDGLTLD 583
Query: 593 SEEIYTIID 601
S ++ IID
Sbjct: 584 SIDVRNIID 592
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 107/418 (25%), Positives = 189/418 (45%), Gaps = 59/418 (14%)
Query: 5 CGSLDDAK-------KVFKMMPERDCVSWNSVVTA---CAANGLVLEALECLERMSSLDN 54
C +L++ + +VFK+ + D + NS+VT C NG+ A + + ++ D
Sbjct: 127 CANLEEIRMARLAHCEVFKLGLDNDHHTVNSMVTMYFRCGENGV---ARKVFDEITEKD- 182
Query: 55 ETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLG 113
LVSW++++ G+ + G+ EA+ + R++ E G EP+ +L SVL AC L L LG
Sbjct: 183 ----LVSWNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELG 238
Query: 114 KEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCEN 173
+ G++ G N ++ + L+ +Y +CG+++S+ +IF ++ ++ N I Y +N
Sbjct: 239 RWVEGFVVERGMKVNSYIGSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQN 298
Query: 174 GNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFT 233
G EA LF M+ +G++P T
Sbjct: 299 GMADEAISLFHSMK------------------------------------ENGVDPNKVT 322
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
+VL ACA + +L GK++ A GLQ D FV AL++MY + L +AQ F+++
Sbjct: 323 LTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDMYAKCGSLESAQRVFNDMP 382
Query: 294 NIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSL--DLTPDIYTVGIILSACSSLATMERG 351
+ + A+ LF M P+ T +LSAC ++ G
Sbjct: 383 RKNDASWNAMISALASHGKAKEALSLFERMSDEGGSARPNDITFVSLLSACVHAGLVDEG 442
Query: 352 KQV-HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHA-RLAYKRISTPDLVSQNAMLTA 407
++ + G + + +VD+ ++ G L A + K PD V+ A+ +A
Sbjct: 443 YRLFDMMSTLFGLVPKIEHYSCMVDLLSRAGHLYEAWDVIEKMPEKPDNVTLGALHSA 500
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 109/231 (47%), Gaps = 38/231 (16%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG L ++++F MP RD +
Sbjct: 263 MYSKCGELVSSRRIFDGMPSRD------------------------------------FI 286
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+A I + QNG +EAI + M+ G++PN TL++VL ACA + L LGK+ Y
Sbjct: 287 TWNAAISAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALDLGKQMDEYA 346
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
T G + FV L+D+Y +CG + SA ++F+ KN+ S N +I +G EA
Sbjct: 347 THRGLQHDIFVATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISALASHGKAKEAL 406
Query: 181 ELFDQMEHLG--VQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEP 229
LF++M G + I++ S++S V L DE + +F + G+ P
Sbjct: 407 SLFERMSDEGGSARPNDITFVSLLSACVHAGLVDEGYRLFDMMSTLFGLVP 457
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNET-PNL 59
MY KCGSL+ A++VF MP ++ SWN++++A A++G EAL ERMS PN
Sbjct: 364 MYAKCGSLESAQRVFNDMPRKNDASWNAMISALASHGKAKEALSLFERMSDEGGSARPND 423
Query: 60 VSWSAVIGGFTQNGYDEEAIGMLFRMQAE--GLEPNARTLSSVLPACAR 106
+++ +++ G +E LF M + GL P S ++ +R
Sbjct: 424 ITFVSLLSACVHAGLVDEGY-RLFDMMSTLFGLVPKIEHYSCMVDLLSR 471
>gi|356514095|ref|XP_003525742.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g01580-like [Glycine max]
Length = 700
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 189/603 (31%), Positives = 310/603 (51%), Gaps = 75/603 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KCG ++DA KVF P++D +V
Sbjct: 149 LYSKCGQMNDAVKVFTEYPKQD------------------------------------VV 172
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQA-EGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
W+++I G+ QNG E A+ RM E + P+ TL S ACA+L +LG+ HG+
Sbjct: 173 LWTSIITGYEQNGSPELALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFNLGRSVHGF 232
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ R GF + + N ++++Y + G + S A
Sbjct: 233 VKRRGFDTKLCLANSILNLYGKTGSIRS-------------------------------A 261
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
LF +M + + IISW+SM++ Y DN A ++F +++ + IE T S L
Sbjct: 262 ANLFREMPY----KDIISWSSMVACYADNGAETNALNLFNEMIDKR-IELNRVTVISALR 316
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
ACA ++L +GK IH LA+ G + D V AL++MY + A F+ + + +
Sbjct: 317 ACASSSNLEEGKHIHKLAVNYGFELDITVSTALMDMYMKCFSPKNAIDLFNRMPKKDVVS 376
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
+ G+ ++ +F MLS PD + IL+A S L +++ +HA+
Sbjct: 377 WAVLFSGYAEIGMAHKSLGVFCNMLSYGTRPDAIALVKILAASSELGIVQQALCLHAFVS 436
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
+ G+D++ IG +L+++YAKC S+ +A +K + D+V+ ++++ AY HG G+E +
Sbjct: 437 KSGFDNNEFIGASLIELYAKCSSIDNANKVFKGMRRKDVVTWSSIIAAYGFHGQGEEALK 496
Query: 420 HFRRILA-SGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDL 477
F ++ S +P+ ++F+S LSAC HAG I+ G + F +M Y + P+ +HY MVDL
Sbjct: 497 LFYQMSNHSDVKPNDVTFVSILSACSHAGLIEEGIKMFHVMVNEYQLMPNTEHYGIMVDL 556
Query: 478 LSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNY 537
L R GEL +A + I ++PM +WGALLG C H N++ G++AA L L+PN+ G Y
Sbjct: 557 LGRMGELDKALDMINEMPMQAGPHVWGALLGACRIHQNIKIGELAALNLFLLDPNHAGYY 616
Query: 538 VMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
+L+N++ W D A+ R +K+ R K G S +E ++E+H F ASDR H S++IY
Sbjct: 617 TLLSNIYCVDKNWHDAAKLRTLIKENRFKKIVGQSMVEIKNEVHSFIASDRFHGESDQIY 676
Query: 598 TII 600
++
Sbjct: 677 GML 679
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 98/417 (23%), Positives = 179/417 (42%), Gaps = 44/417 (10%)
Query: 97 LSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFS 156
L +L C K+S+ + H + G + FVV L +Y R + A K+F
Sbjct: 7 LVKLLETCC--SKISI-PQLHSQCLKVGLAHDSFVVTKLNVLYARYASLCHAHKLFE--- 60
Query: 157 IKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFS 216
E C T+ + WN+++ Y + E S
Sbjct: 61 ---ETPCKTVYL-----------------------------WNALLRSYFLEGKWVETLS 88
Query: 217 MFRDLLMRDGI---EPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALV 273
+F + D I P ++T L +C+ + L GK IH + +D FVG AL+
Sbjct: 89 LFHQM-NADAITEERPDNYTVSIALKSCSGLQKLELGKMIHGFLKKKKIDNDMFVGSALI 147
Query: 274 EMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLD-LTPDI 332
E+Y + + A F E + +L G+E N A+ FS M+ L+ ++PD
Sbjct: 148 ELYSKCGQMNDAVKVFTEYPKQDVVLWTSIITGYEQNGSPELALAFFSRMVVLEQVSPDP 207
Query: 333 YTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKR 392
T+ SAC+ L+ G+ VH + R G+D+ + + +++++Y K GS++ A ++
Sbjct: 208 VTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCLANSILNLYGKTGSIRSAANLFRE 267
Query: 393 ISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTG 452
+ D++S ++M+ YA +G + F ++ + ++ +SAL AC + +++ G
Sbjct: 268 MPYKDIISWSSMVACYADNGAETNALNLFNEMIDKRIELNRVTVISALRACASSSNLEEG 327
Query: 453 SEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
L Y + + T ++D+ + A + ++P D V W L G
Sbjct: 328 KHIHKLAVNYGFELDITVSTALMDMYMKCFSPKNAIDLFNRMP-KKDVVSWAVLFSG 383
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 124/281 (44%), Gaps = 33/281 (11%)
Query: 252 EIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNV 311
++H+ + +GL D+FV L +Y RY L A F+E V
Sbjct: 22 QLHSQCLKVGLAHDSFVVTKLNVLYARYASLCHAHKLFEETPC--------------KTV 67
Query: 312 YTWNA--------------MQLFSEMLSLDLT---PDIYTVGIILSACSSLATMERGKQV 354
Y WNA + LF +M + +T PD YTV I L +CS L +E GK +
Sbjct: 68 YLWNALLRSYFLEGKWVETLSLFHQMNADAITEERPDNYTVSIALKSCSGLQKLELGKMI 127
Query: 355 HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHG 414
H + + D+D+ +G+AL+++Y+KCG + A + D+V +++T Y +G
Sbjct: 128 HGFLKKKKIDNDMFVGSALIELYSKCGQMNDAVKVFTEYPKQDVVLWTSIITGYEQNGSP 187
Query: 415 KEGIAHFRR-ILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTC 473
+ +A F R ++ PD ++ +SA SAC G + L
Sbjct: 188 ELALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCLANS 247
Query: 474 MVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
+++L + G + A +++P D + W +++ +G
Sbjct: 248 ILNLYGKTGSIRSAANLFREMPY-KDIISWSSMVACYADNG 287
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 108/242 (44%), Gaps = 11/242 (4%)
Query: 335 VGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS 394
V ++ + CS ++ Q+H+ ++ G D + T L +YA+ SL HA ++
Sbjct: 8 VKLLETCCSKISI----PQLHSQCLKVGLAHDSFVVTKLNVLYARYASLCHAHKLFEETP 63
Query: 395 TPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGF---RPDHISFLSALSACVHAGSIKT 451
+ NA+L +Y + G E ++ F ++ A RPD+ + AL +C ++
Sbjct: 64 CKTVYLWNALLRSYFLEGKWVETLSLFHQMNADAITEERPDNYTVSIALKSCSGLQKLEL 123
Query: 452 GSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCV 511
G + + + + +++L S+ G++ +A + + P D V+W +++ G
Sbjct: 124 GKMIHGFLKKKKIDNDMFVGSALIELYSKCGQMNDAVKVFTEYP-KQDVVLWTSIITGYE 182
Query: 512 SHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSD--LARTRQKMKDRRMHKSP 569
+G+ E R++ LE + + V L + + + SD L R+ RR +
Sbjct: 183 QNGSPELALAFFSRMVVLE-QVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTK 241
Query: 570 GC 571
C
Sbjct: 242 LC 243
>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 868
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 167/546 (30%), Positives = 297/546 (54%), Gaps = 41/546 (7%)
Query: 54 NETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLG 113
E ++V+W+++I G+ NG D EA+GM + M+ + + + +SV+ CA L++L
Sbjct: 255 TEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFT 314
Query: 114 KEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCEN 173
++ H + + GF+ + + L+ Y +C ML AL++F E+ C
Sbjct: 315 EQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLF------KEIGCV--------- 359
Query: 174 GNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFT 233
GNV +SW +MISG++ N +EA +F ++ R G+ P FT
Sbjct: 360 GNV-------------------VSWTAMISGFLQNDGKEEAVDLFSEM-KRKGVRPNEFT 399
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
+ +L A ++ E+HA + + + VG AL++ Y + + A F I+
Sbjct: 400 YSVILTALPVISP----SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGID 455
Query: 294 NIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSL-ATMERGK 352
+ + + G+ T A+++F E+ + P+ +T IL+ C++ A+M +GK
Sbjct: 456 DKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGK 515
Query: 353 QVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHG 412
Q H +AI+ DS + + +AL+ MYAK G+++ A +KR DLVS N+M++ YA HG
Sbjct: 516 QFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHG 575
Query: 413 HGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHY 471
+ + F+ + + D ++F+ +AC HAG ++ G ++FD+M + P+ +H
Sbjct: 576 QAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHN 635
Query: 472 TCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEP 531
+CMVDL SRAG+L +A + I+ +P S +W +L C H E G++AA+++I ++P
Sbjct: 636 SCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKP 695
Query: 532 NNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHD 591
++ YV+L+N++A +G W + A+ R+ M +R + K PG SWIE +++ + F A DRSH
Sbjct: 696 EDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHP 755
Query: 592 RSEEIY 597
++IY
Sbjct: 756 LKDQIY 761
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 117/511 (22%), Positives = 215/511 (42%), Gaps = 71/511 (13%)
Query: 35 ANGLVLEALECLERMSS--------LDNETP--NLVSWSAVIGGFTQNGYDEEAIGMLFR 84
ANG+ + C +SS L +++P + S+ +++ GF+++G +EA +
Sbjct: 24 ANGVAQVRIYCFGTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLN 83
Query: 85 MQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGD 144
+ G+E + SSVL A L G++ H + GF+ + V LVD Y + +
Sbjct: 84 IHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSN 143
Query: 145 MLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISG 204
K+F + +N V+ T+I GY N E LF +M++
Sbjct: 144 FKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQN---------------- 187
Query: 205 YVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQS 264
+G +P SFTF + L A+ +G ++H + + GL
Sbjct: 188 --------------------EGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDK 227
Query: 265 DTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEML 324
V +L+ +Y + ++ A++ FD+ E + G+ N A+ +F M
Sbjct: 228 TIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMR 287
Query: 325 SLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLK 384
+ + ++ C++L + +Q+H ++ G+ D +I TAL+ Y+KC ++
Sbjct: 288 LNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAML 347
Query: 385 HARLAYKRIS-TPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSAC 443
A +K I ++VS AM++ + + +E + F + G RP+ ++ L+A
Sbjct: 348 DALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTAL 407
Query: 444 -------VHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPM 496
VHA +KT E + T ++D + G++ EA + I
Sbjct: 408 PVISPSEVHAQVVKTNYERSSTVG-----------TALLDAYVKLGKVEEAAKVFSGID- 455
Query: 497 APDSVMWGALLGGCVSHGNLE-----FGQIA 522
D V W A+L G G E FG++
Sbjct: 456 DKDIVAWSAMLAGYAQTGETEAAIKMFGELT 486
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G+++ A++VFK E+D VSWNS+++ A +G ++AL+ + M + V
Sbjct: 539 MYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDG-V 597
Query: 61 SWSAVIGGFTQNGYDEE 77
++ V T G EE
Sbjct: 598 TFIGVFAACTHAGLVEE 614
>gi|125563252|gb|EAZ08632.1| hypothetical protein OsI_30906 [Oryza sativa Indica Group]
Length = 755
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 191/596 (32%), Positives = 309/596 (51%), Gaps = 58/596 (9%)
Query: 7 SLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVI 66
SL DA+ +F MP RD V++N ++++ A +GLV A + D VSW+ ++
Sbjct: 115 SLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHYFDLAPEKD-----AVSWNGML 169
Query: 67 GGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFM 126
+ +NG EEA G LF + E +A + ++++ + K+S +E + +
Sbjct: 170 AAYVRNGRVEEARG-LFNSRTEW---DAISWNALMSGYVQWGKMSEARELFDRMPGRDVV 225
Query: 127 SNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQM 186
S +V+G Y R GDM+ A ++F +++ + ++ GY +NG + EAR +FD M
Sbjct: 226 SWNIMVSG----YARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAM 281
Query: 187 EHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNS 246
+R +SWN+M++ Y+ + DEA +F + R+ ++ ++L A
Sbjct: 282 P----ERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRN-----VASWNTMLTGYAQAGM 332
Query: 247 LRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDG 306
L + K + Q D A++ Y + G E+
Sbjct: 333 LEEAKAVFDTMP----QKDAVSWAAMLAAYSQ---------------------GGCSEE- 366
Query: 307 FEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSD 366
+QLF EM + +LS C+ +A +E G Q+H IR GY
Sbjct: 367 ---------TLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVG 417
Query: 367 VHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILA 426
+G AL+ MY KCG+++ AR A++ + D+VS N M+ YA HG GKE + F +
Sbjct: 418 CFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRT 477
Query: 427 SGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELG 485
+ +PD I+ + L+AC H+G ++ G +F M + + V +HYTCM+DLL RAG L
Sbjct: 478 TSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLA 537
Query: 486 EAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFA 545
EA++ +K +P PDS MWGALLG H N E G+ AA+++ ELEP N G YV+L+N++A
Sbjct: 538 EAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYA 597
Query: 546 YAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
+G+W D + R M++R + K PG SWIE ++++H F A D H E+IY ++
Sbjct: 598 SSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLE 653
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 97/200 (48%), Gaps = 14/200 (7%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG+++DA+ F+ M ERD VSWN+++ A +G EALE + M + + P+ +
Sbjct: 427 MYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTK-PDDI 485
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
+ V+ + +G E+ I + M + G+ + ++ R +L+ E H
Sbjct: 486 TLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLA---EAHDL 542
Query: 120 ITRNGFMSNPFVVNGLVDVYR--RCGDM--LSALKIFSKFSIKNEVSCNTIIVG--YCEN 173
+ F + + L+ R R ++ +A KI F ++ E + +++ Y +
Sbjct: 543 MKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKI---FELEPENAGMYVLLSNIYASS 599
Query: 174 GNVAEARELFDQMEHLGVQR 193
G +AR++ ME GV++
Sbjct: 600 GKWRDARKMRVMMEERGVKK 619
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 102/527 (19%), Positives = 183/527 (34%), Gaps = 120/527 (22%)
Query: 133 NGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG------------------ 174
N + + R G + A ++F+ ++ + N ++ GY NG
Sbjct: 42 NKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIPRPDNY 101
Query: 175 -------------NVAEARELFDQME---------------------------HLGVQRG 194
++A+AR LFD+M L ++
Sbjct: 102 SYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHYFDLAPEKD 161
Query: 195 IISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIH 254
+SWN M++ YV N +EA +F D I + G V + + +E+
Sbjct: 162 AVSWNGMLAAYVRNGRVEEARGLFNSRTEWDAISWNALMSGYV-----QWGKMSEARELF 216
Query: 255 ALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTW 314
D +V Y R D+V A+ FD + G+ N
Sbjct: 217 DRMPG----RDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLE 272
Query: 315 NAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALV 374
A ++F M + + +++A M+ K++ + C +V ++
Sbjct: 273 EARRVFDAMPERNAV----SWNAMVAAYIQRRMMDEAKELFNM-MPC---RNVASWNTML 324
Query: 375 DMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHI 434
YA+ G L+ A+ + + D VS AML AY+ G +E + F + G +
Sbjct: 325 TGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRS 384
Query: 435 SFLSALSACVHAGSIKTGSEFFD----------------LMAYY-------DVKPSLKH- 470
+F LS C +++ G + L+A Y D + + +
Sbjct: 385 AFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEM 444
Query: 471 -------YTCMVDLLSRAG---ELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE--- 517
+ M+ +R G E E ++ ++ PD + +L C G +E
Sbjct: 445 EERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGI 504
Query: 518 --FGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKD 562
F + D + +P +Y + +L AGR LA MKD
Sbjct: 505 SYFYSMHHDFGVTAKPE---HYTCMIDLLGRAGR---LAEAHDLMKD 545
>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
Length = 682
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 185/547 (33%), Positives = 286/547 (52%), Gaps = 41/547 (7%)
Query: 54 NETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLG 113
+ PN+ ++ +I G N +E+I + M+ EGL P++ T VL ACAR+ LG
Sbjct: 68 TKEPNIFLFNTMIRGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELG 127
Query: 114 KEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCEN 173
+ H + + G ++ FV L+++Y +CG + +A K+F KN
Sbjct: 128 VKMHSLVVKAGCEADAFVKISLINLYTKCGFIDNAFKVFDDIPDKN-------------- 173
Query: 174 GNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFT 233
SW + ISGYV EA MFR LL G+ P SF+
Sbjct: 174 ---------------------FASWTATISGYVGVGKCREAIDMFRRLL-EMGLRPDSFS 211
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI- 292
VL AC LR G+ I G+ + FV ALV+ Y + ++ A+ FD +
Sbjct: 212 LVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCGNMERARSVFDGML 271
Query: 293 -ENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG 351
+NI + ++ G+ N A+ LF +ML+ L PD Y + +L +C+ L +E G
Sbjct: 272 EKNIVSWSSMIQ--GYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLCSCARLGALELG 329
Query: 352 KQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMH 411
+ + +GTAL+DMYAKCG + A ++ + D V NA ++ AM
Sbjct: 330 DWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMRKKDRVVWNAAISGLAMS 389
Query: 412 GHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKH 470
GH K+ + F ++ SG +PD +F+ L AC HAG ++ G +F+ M + + P ++H
Sbjct: 390 GHVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHAGLVEEGRRYFNSMECVFTLTPEIEH 449
Query: 471 YTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELE 530
Y CMVDLL RAG L EA++ IK +PM ++++WGALLGGC H + + ++ +LI LE
Sbjct: 450 YGCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGALLGGCRLHRDTQLVEVVLKKLIALE 509
Query: 531 PNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSH 590
P ++GNYV+L+N++A + +W + A+ R M +R + K PG SWIE +H+F D SH
Sbjct: 510 PWHSGNYVLLSNIYAASHKWEEAAKIRSIMSERGVKKIPGYSWIEVDGVVHQFLVGDTSH 569
Query: 591 DRSEEIY 597
SE+IY
Sbjct: 570 PLSEKIY 576
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 100/414 (24%), Positives = 169/414 (40%), Gaps = 76/414 (18%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KCG +D+A KVF +P+++ SW + ++
Sbjct: 152 LYTKCGFIDNAFKVFDDIPDKNFASWTATIS----------------------------- 182
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
G+ G EAI M R+ GL P++ +L VL AC R L G+ YI
Sbjct: 183 -------GYVGVGKCREAIDMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYI 235
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
T NG + N FV LVD Y +CG+M A +F KN VS +++I GY NG EA
Sbjct: 236 TENGMVRNVFVATALVDFYGKCGNMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEAL 295
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+LF +M + +G++P + VL +
Sbjct: 296 DLFFKM------------------------------------LNEGLKPDCYAMVGVLCS 319
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA + +L G L ++ +G AL++MY + + A F + + ++
Sbjct: 320 CARLGALELGDWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMRKKDRVVW 379
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G + + +A+ LF +M + PD T +L AC+ +E G++ + ++
Sbjct: 380 NAAISGLAMSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHAGLVEEGRR-YFNSME 438
Query: 361 CGY--DSDVHIGTALVDMYAKCGSLKHARLAYKRIST-PDLVSQNAMLTAYAMH 411
C + ++ +VD+ + G L A K + + + A+L +H
Sbjct: 439 CVFTLTPEIEHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGALLGGCRLH 492
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 125/268 (46%), Gaps = 1/268 (0%)
Query: 247 LRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDG 306
L+ K IHA + LGL DT++ ++ + + + D+ + L G
Sbjct: 23 LKHLKHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLFNTMIRG 82
Query: 307 FEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSD 366
N +++++ M L+PD +T +L AC+ + E G ++H+ ++ G ++D
Sbjct: 83 LVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAGCEAD 142
Query: 367 VHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILA 426
+ +L+++Y KCG + +A + I + S A ++ Y G +E I FRR+L
Sbjct: 143 AFVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRLLE 202
Query: 427 SGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGE 486
G RPD S + LSAC G +++G + + + ++ T +VD + G +
Sbjct: 203 MGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCGNMER 262
Query: 487 AYEFIKKIPMAPDSVMWGALLGGCVSHG 514
A + + + V W +++ G S+G
Sbjct: 263 ARSVFDGM-LEKNIVSWSSMIQGYASNG 289
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/196 (18%), Positives = 76/196 (38%), Gaps = 1/196 (0%)
Query: 334 TVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRI 393
+ GI + ++ K +HA +R G D D ++ ++ G+ ++ +
Sbjct: 9 SAGIKNRLIQGFSCLKHLKHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQT 68
Query: 394 STPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGS 453
P++ N M+ ++ +E I + + G PD +F L AC + G
Sbjct: 69 KEPNIFLFNTMIRGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGV 128
Query: 454 EFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSH 513
+ L+ + +++L ++ G + A++ IP + W A + G V
Sbjct: 129 KMHSLVVKAGCEADAFVKISLINLYTKCGFIDNAFKVFDDIP-DKNFASWTATISGYVGV 187
Query: 514 GNLEFGQIAADRLIEL 529
G RL+E+
Sbjct: 188 GKCREAIDMFRRLLEM 203
>gi|449461477|ref|XP_004148468.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Cucumis sativus]
gi|449515698|ref|XP_004164885.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Cucumis sativus]
Length = 837
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 178/588 (30%), Positives = 309/588 (52%), Gaps = 41/588 (6%)
Query: 14 VFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNG 73
V + + D ++N ++ G V +R+ + N++SW+ +I G+ QN
Sbjct: 269 VLRSETKMDVSTYNVLIDFYTKCGRVKAGKALFDRL-----DVKNIISWTTMIAGYMQNS 323
Query: 74 YDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVN 133
YD EA+ ++ M G +P+ SSVL +C + L G++ H Y+ + + FV N
Sbjct: 324 YDWEAVELVGEMFRMGWKPDEYACSSVLTSCGSVDALQHGRQIHSYVIKVCLEHDNFVTN 383
Query: 134 GLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQR 193
L+D+Y +C + A ++F + V+C++++
Sbjct: 384 ALIDMYSKCNALDDAKRVF------DVVTCHSVVY------------------------- 412
Query: 194 GIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEI 253
+N+MI GY A +F+++ ++ + P+ TF S+L A + L+ K+I
Sbjct: 413 ----YNAMIEGYSRQGYLCGALEVFQEMRLKH-VSPSFLTFVSLLGLSAALLCLQLSKQI 467
Query: 254 HALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYT 313
H L I G D F AL+++Y + + A+ F+ N + ++ G+ + +
Sbjct: 468 HGLIIKYGFSLDKFTSSALIDVYSKCSCIRDARYVFEGTTNKDIVVWNSLFSGYNLQLKS 527
Query: 314 WNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTAL 373
A +L+S++ P+ +T + +A S LA++ G+Q H ++ G +SD I AL
Sbjct: 528 EEAFKLYSDLQLSRERPNEFTFAALTTAASILASLPHGQQFHNQVMKMGLESDPFITNAL 587
Query: 374 VDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDH 433
VDMYAKCGS++ A + D N+M++ YA HG +E + F ++++ P++
Sbjct: 588 VDMYAKCGSVEEAEKIFSSSVWKDTACWNSMISMYAQHGKVEEALRMFETMVSNNINPNY 647
Query: 434 ISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKK 493
++F+S LSAC H G ++ G + ++ MA Y ++P ++HY +V LL RAG L EA EFI+K
Sbjct: 648 VTFVSVLSACSHVGFVEDGLQHYNSMARYGIEPGIEHYASVVTLLGRAGRLTEAREFIEK 707
Query: 494 IPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDL 553
+ + P +++W +LL C GN+E + AA+ I ++P ++G+YVML+N+FA G W D+
Sbjct: 708 MTIRPAALVWRSLLSACRVFGNVELAKHAAEMAISIDPMDSGSYVMLSNIFASKGMWGDV 767
Query: 554 ARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
R R KM + K PG SWIE E+H F + D+ HD ++ IY +D
Sbjct: 768 KRLRLKMDVNGVVKEPGQSWIEVNGEVHIFVSRDKVHDETDLIYLALD 815
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 146/612 (23%), Positives = 259/612 (42%), Gaps = 109/612 (17%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEAL--------ECLERMSSL- 52
Y K GS+ DA +F MP R+ VSW+SVV+ G +AL C+++++
Sbjct: 85 YFKIGSVFDAGTLFDKMPNRNLVSWSSVVSMYTQLGYNEKALLYFLEFQRTCVDKLNEYI 144
Query: 53 -----------DNETPNLVSWSAVI-GGFTQNGYDEEAIGMLF---------RMQAEGLE 91
D P S VI GF ++ Y ++ +L+ R+ +GL
Sbjct: 145 LASIIRACVQRDGGEPGSQVHSYVIKSGFGEDVYVGTSLVVLYAKHGEIDKARLVFDGLV 204
Query: 92 ------------------------------------PNARTLSSVLPACARLQKLSLGKE 115
P+ LSS+L AC+ L L GK+
Sbjct: 205 LKTPVTWTAIITGYTKSGRSEVSLQLFNLMMESNVIPDKYVLSSILNACSVLGYLKGGKQ 264
Query: 116 FHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGN 175
H Y+ R+ + N L+D Y +CG + + +F + +KN +S T+I GY +N
Sbjct: 265 IHAYVLRSETKMDVSTYNVLIDFYTKCGRVKAGKALFDRLDVKNIISWTTMIAGYMQNSY 324
Query: 176 VAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFG 235
EA EL +M R G +P +
Sbjct: 325 DWEAVELVGEM------------------------------------FRMGWKPDEYACS 348
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
SVL +C +++L+ G++IH+ I + L+ D FV AL++MY + L A+ FD +
Sbjct: 349 SVLTSCGSVDALQHGRQIHSYVIKVCLEHDNFVTNALIDMYSKCNALDDAKRVFDVVTCH 408
Query: 296 ENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVH 355
+ +G+ Y A+++F EM ++P T +L ++L ++ KQ+H
Sbjct: 409 SVVYYNAMIEGYSRQGYLCGALEVFQEMRLKHVSPSFLTFVSLLGLSAALLCLQLSKQIH 468
Query: 356 AYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGK 415
I+ G+ D +AL+D+Y+KC ++ AR ++ + D+V N++ + Y + +
Sbjct: 469 GLIIKYGFSLDKFTSSALIDVYSKCSCIRDARYVFEGTTNKDIVVWNSLFSGYNLQLKSE 528
Query: 416 EGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMV 475
E + + S RP+ +F + +A S+ G +F + + ++ +V
Sbjct: 529 EAFKLYSDLQLSRERPNEFTFAALTTAASILASLPHGQQFHNQVMKMGLESDPFITNALV 588
Query: 476 DLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIE--LEPNN 533
D+ ++ G + EA E I + D+ W +++ HG +E A R+ E + N
Sbjct: 589 DMYAKCGSVEEA-EKIFSSSVWKDTACWNSMISMYAQHGKVE----EALRMFETMVSNNI 643
Query: 534 TGNYVMLANLFA 545
NYV ++ +
Sbjct: 644 NPNYVTFVSVLS 655
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 172/357 (48%), Gaps = 13/357 (3%)
Query: 164 NTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLM 223
N ++ Y + G+V +A LFD+M + R ++SW+S++S Y ++A F +
Sbjct: 79 NLLLHSYFKIGSVFDAGTLFDKMPN----RNLVSWSSVVSMYTQLGYNEKALLYFLEFQR 134
Query: 224 RDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLV 283
+ + S++ AC + G ++H+ I G D +VG +LV +Y ++ ++
Sbjct: 135 TCVDKLNEYILASIIRACVQRDGGEPGSQVHSYVIKSGFGEDVYVGTSLVVLYAKHGEID 194
Query: 284 AAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACS 343
A++ FD + + G+ + + ++QLF+ M+ ++ PD Y + IL+ACS
Sbjct: 195 KARLVFDGLVLKTPVTWTAIITGYTKSGRSEVSLQLFNLMMESNVIPDKYVLSSILNACS 254
Query: 344 SLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNA 403
L ++ GKQ+HAY +R DV L+D Y KCG +K + + R+ +++S
Sbjct: 255 VLGYLKGGKQIHAYVLRSETKMDVSTYNVLIDFYTKCGRVKAGKALFDRLDVKNIISWTT 314
Query: 404 MLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYD 463
M+ Y + + E + + G++PD + S L++C +++ G + Y
Sbjct: 315 MIAGYMQNSYDWEAVELVGEMFRMGWKPDEYACSSVLTSCGSVDALQHGRQIHS----YV 370
Query: 464 VKPSLKH----YTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNL 516
+K L+H ++D+ S+ L +A + + + V + A++ G G L
Sbjct: 371 IKVCLEHDNFVTNALIDMYSKCNALDDA-KRVFDVVTCHSVVYYNAMIEGYSRQGYL 426
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 124/278 (44%), Gaps = 4/278 (1%)
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
++L+A S+ +++H + GLQ D F+ L+ Y + + A FD++
Sbjct: 43 LANLLLAPVSNKSILYYRKVHCQVVLWGLQYDVFLSNLLLHSYFKIGSVFDAGTLFDKMP 102
Query: 294 NIENLLGKMKEDGFEPNV-YTWNAMQLFSEMLSLDLTP-DIYTVGIILSACSSLATMERG 351
N NL+ + Y A+ F E + + Y + I+ AC E G
Sbjct: 103 N-RNLVSWSSVVSMYTQLGYNEKALLYFLEFQRTCVDKLNEYILASIIRACVQRDGGEPG 161
Query: 352 KQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMH 411
QVH+Y I+ G+ DV++GT+LV +YAK G + ARL + + V+ A++T Y
Sbjct: 162 SQVHSYVIKSGFGEDVYVGTSLVVLYAKHGEIDKARLVFDGLVLKTPVTWTAIITGYTKS 221
Query: 412 GHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHY 471
G + + F ++ S PD S L+AC G +K G + + + K + Y
Sbjct: 222 GRSEVSLQLFNLMMESNVIPDKYVLSSILNACSVLGYLKGGKQIHAYVLRSETKMDVSTY 281
Query: 472 TCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
++D ++ G + ++ + + + W ++ G
Sbjct: 282 NVLIDFYTKCGRVKAGKALFDRLDV-KNIISWTTMIAG 318
>gi|413946633|gb|AFW79282.1| hypothetical protein ZEAMMB73_599854 [Zea mays]
Length = 863
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 206/667 (30%), Positives = 321/667 (48%), Gaps = 103/667 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
M + G A +VF MPERD SWN +V +GL+ EAL+ RM
Sbjct: 132 MLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKSGLLDEALDLYHRM----------- 180
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
W+ G+ P+ T VL +C + +G+E H ++
Sbjct: 181 MWA-------------------------GVRPDVYTFPCVLRSCGGVPDWRMGREVHAHV 215
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R GF V+N L+ +Y +CGD+++A K+F ++ + +S N +I G+ ENG
Sbjct: 216 LRFGFGEEVDVLNALMTMYAKCGDVMAARKVFDSMTVMDCISWNAMIAGHFENGECNAGL 275
Query: 181 ELFDQMEH-------------------------------LGVQRG----IISWNSMISGY 205
ELF M H L V+RG + NS+I Y
Sbjct: 276 ELFLTMLHDEVQPNLMTITSVTVASGLLSDVTFAKEMHGLAVKRGFAGDVAFCNSLIQMY 335
Query: 206 VDNSLYDEAFSMFRDLLMRDG------------------------------IEPTSFTFG 235
+ +A ++F + RD + P T
Sbjct: 336 ASLGMMRQARTVFSRMDTRDAMTWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDITIA 395
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
S L ACA + SL G ++H LA + G S V A++EMY + + + A F +
Sbjct: 396 SALAACACLGSLDVGVKLHELAESKGFISYIVVTNAILEMYAKSKRIDKAIEVFKCMHEK 455
Query: 296 ENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVH 355
+ + GF N + A+ F ML+ D+ P+ T L+AC++ + GK++H
Sbjct: 456 DVVSWSSMIAGFCFNHRNFEALYYFRHMLA-DVKPNSVTFIAALAACAATGALRSGKEIH 514
Query: 356 AYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGK 415
A+ +RCG + + ++ AL+D+Y KCG +A + D+VS N M+ + HGHG
Sbjct: 515 AHVLRCGIEYEGYLPNALIDLYVKCGQTGYAWAQFCAHGAKDVVSWNIMIAGFVAHGHGD 574
Query: 416 EGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCM 474
++ F +++ G PD ++F++ L AC G + G E F M Y + P+LKHY CM
Sbjct: 575 TALSFFNQMVKIGECPDEVTFVALLCACSRGGMVSEGWELFHSMTEKYSIVPNLKHYACM 634
Query: 475 VDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNT 534
VDLLSRAG+L EAY FI ++P+ PD+ +WGALL GC H ++E G++AA ++ LEPN+
Sbjct: 635 VDLLSRAGQLTEAYNFINEMPITPDAAVWGALLNGCRIHRHVELGELAAKYVLALEPNDA 694
Query: 535 GNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSE 594
G +V+L +L+A A W LAR R+ M+++ + GCSW+E + +H F D SH +
Sbjct: 695 GYHVLLCDLYADACLWDKLARVRKTMREKGLDHDSGCSWVEVKGVVHAFLTDDESHPQIR 754
Query: 595 EIYTIID 601
EI T+++
Sbjct: 755 EINTVLE 761
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 137/323 (42%), Gaps = 24/323 (7%)
Query: 212 DEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGA 271
D ++FR R +EP L ACA + + HA GL+ +G A
Sbjct: 89 DAYVALFRLCEWRRAVEPG-------LRACAHAD------DRHAW---FGLR----LGNA 128
Query: 272 LVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPD 331
++ M R+ + A F ++ + + G+ + A+ L+ M+ + PD
Sbjct: 129 MLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKSGLLDEALDLYHRMMWAGVRPD 188
Query: 332 IYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYK 391
+YT +L +C + G++VHA+ +R G+ +V + AL+ MYAKCG + AR +
Sbjct: 189 VYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMAARKVFD 248
Query: 392 RISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKT 451
++ D +S NAM+ + +G G+ F +L +P+ ++ S A +
Sbjct: 249 SMTVMDCISWNAMIAGHFENGECNAGLELFLTMLHDEVQPNLMTITSVTVASGLLSDVTF 308
Query: 452 GSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCV 511
E L + ++ + + G + +A ++ D++ W A++ G
Sbjct: 309 AKEMHGLAVKRGFAGDVAFCNSLIQMYASLGMMRQARTVFSRMD-TRDAMTWTAMISGYE 367
Query: 512 SHGNLEFGQIAADRLIELEPNNT 534
+G F A + +E NN
Sbjct: 368 KNG---FPDKALEVYALMEVNNV 387
>gi|357124213|ref|XP_003563798.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 637
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 182/509 (35%), Positives = 280/509 (55%), Gaps = 39/509 (7%)
Query: 92 PNA-RTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALK 150
PN+ +SVL +C + L G++ HG + +G + + LVD+Y CG
Sbjct: 59 PNSYHHYTSVLQSCVASRSLGTGRQLHGRLLVSGLGPDTVLATKLVDLYAACG------- 111
Query: 151 IFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSL 210
+VG+ AR LFD M +R + WN +I Y +
Sbjct: 112 ----------------LVGH--------ARRLFDGMP----KRNVFLWNVLIRAYARDGP 143
Query: 211 YDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGG 270
++ A ++R ++ G+EP +FT+ L ACA + L G+E+H + D FV
Sbjct: 144 HEVAIQLYRGMV-DYGVEPDNFTYPLALKACAALLDLETGREVHERVLGTHWGEDMFVCA 202
Query: 271 ALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTP 330
LV+MY + + A+ FD I ++++ + N A+ L +M + + P
Sbjct: 203 GLVDMYAKCGCVDDARAVFDRIRVRDSVVWNSMIAAYGQNGRPMEALSLCRDMAANGVGP 262
Query: 331 DIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAY 390
I T+ +SA + A + RG+++H + R G+D + T+LVDMYAK G ++ AR+ +
Sbjct: 263 TIATLVSTISAAADAAALPRGRELHGFGWRRGFDRQDKLKTSLVDMYAKSGWVQVARVLF 322
Query: 391 KRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRI-LASGFRPDHISFLSALSACVHAGSI 449
+++ +LVS NAM+ Y MHGH E + F ++ + + PD+I+F+ LSAC H G +
Sbjct: 323 EQLMKRELVSWNAMICGYGMHGHFDEALKLFNKMRVEAQVTPDNITFVGVLSACNHGGMV 382
Query: 450 KTGSEFFDLMA-YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLG 508
K EFF LM Y +KP+++H+TC+VD+L AG EAY+ IK +PM PDS +WGALL
Sbjct: 383 KEAKEFFGLMVDVYSIKPTVQHFTCLVDVLGHAGRFEEAYDLIKGMPMQPDSGIWGALLN 442
Query: 509 GCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKS 568
GC H N+E G++A +LIELEP + GNYV+L+N++A +G+W AR R+ M +R + K
Sbjct: 443 GCKIHKNVELGELALQKLIELEPEDAGNYVLLSNIYAQSGKWEKAARVRKLMTNRGLKKI 502
Query: 569 PGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
GCSWIE + + H F D SH RS EIY
Sbjct: 503 IGCSWIELKGKTHGFLVGDASHPRSAEIY 531
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 103/397 (25%), Positives = 170/397 (42%), Gaps = 52/397 (13%)
Query: 22 DCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGM 81
D V +V AA GLV A + M N+ W+ +I + ++G E AI +
Sbjct: 96 DTVLATKLVDLYAACGLVGHARRLFDGMPK-----RNVFLWNVLIRAYARDGPHEVAIQL 150
Query: 82 LFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRR 141
M G+EP+ T L ACA L L G+E H + + + FV GLVD+Y +
Sbjct: 151 YRGMVDYGVEPDNFTYPLALKACAALLDLETGREVHERVLGTHWGEDMFVCAGLVDMYAK 210
Query: 142 CGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSM 201
CG + A +F + +++ V N++I Y +NG E
Sbjct: 211 CGCVDDARAVFDRIRVRDSVVWNSMIAAYGQNGRPME----------------------- 247
Query: 202 ISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALG 261
A S+ RD+ +G+ PT T S + A AD +L +G+E+H G
Sbjct: 248 ------------ALSLCRDMAA-NGVGPTIATLVSTISAAADAAALPRGRELHGFGWRRG 294
Query: 262 LQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFS 321
+ +LV+MY + + A++ F+++ E + G+ + + A++LF+
Sbjct: 295 FDRQDKLKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHFDEALKLFN 354
Query: 322 EM-LSLDLTPDIYTVGIILSACSSLATMERGKQ-----VHAYAIRCGYDSDVHIGTALVD 375
+M + +TPD T +LSAC+ ++ K+ V Y+I+ V T LVD
Sbjct: 355 KMRVEAQVTPDNITFVGVLSACNHGGMVKEAKEFFGLMVDVYSIK----PTVQHFTCLVD 410
Query: 376 MYAKCGSLKHARLAYKRIS-TPDLVSQNAMLTAYAMH 411
+ G + A K + PD A+L +H
Sbjct: 411 VLGHAGRFEEAYDLIKGMPMQPDSGIWGALLNGCKIH 447
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 127/297 (42%), Gaps = 40/297 (13%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG +DDA+ VF + RD V WNS
Sbjct: 207 MYAKCGCVDDARAVFDRIRVRDSVVWNS-------------------------------- 234
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+I + QNG EA+ + M A G+ P TL S + A A L G+E HG+
Sbjct: 235 ----MIAAYGQNGRPMEALSLCRDMAANGVGPTIATLVSTISAAADAAALPRGRELHGFG 290
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R GF + LVD+Y + G + A +F + + VS N +I GY +G+ EA
Sbjct: 291 WRRGFDRQDKLKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHFDEAL 350
Query: 181 ELFDQME-HLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
+LF++M V I++ ++S + EA F ++ I+PT F ++
Sbjct: 351 KLFNKMRVEAQVTPDNITFVGVLSACNHGGMVKEAKEFFGLMVDVYSIKPTVQHFTCLVD 410
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
+E + L + +Q D+ + GAL+ ++++ ++A ++ +E
Sbjct: 411 VLGHAGRF---EEAYDLIKGMPMQPDSGIWGALLNGCKIHKNVELGELALQKLIELE 464
>gi|334185017|ref|NP_186807.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546765|sp|Q9SS97.2|PP205_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g01580
gi|332640170|gb|AEE73691.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 184/568 (32%), Positives = 297/568 (52%), Gaps = 45/568 (7%)
Query: 37 GLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRM-QAEGLEPNAR 95
G ++EAL + + E P++V+WS+++ GF +NG +A+ RM A + P+
Sbjct: 110 GRMIEALRMFDEL-----EKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRV 164
Query: 96 TLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKF 155
TL +++ AC +L LG+ HG++ R GF ++ +VN L++ Y + A+ +F
Sbjct: 165 TLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMI 224
Query: 156 SIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAF 215
+ ++ +ISW+++I+ YV N EA
Sbjct: 225 A-----------------------------------EKDVISWSTVIACYVQNGAAAEAL 249
Query: 216 SMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEM 275
+F D+ M DG EP T VL ACA + L +G++ H LAI GL+++ V ALV+M
Sbjct: 250 LVFNDM-MDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDM 308
Query: 276 YCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLT-PDIYT 334
Y + A F I + + GF N +++ FS ML + T PD
Sbjct: 309 YMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAIL 368
Query: 335 VGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS 394
+ +L +CS L +E+ K H+Y I+ G+DS+ IG +LV++Y++CGSL +A + I+
Sbjct: 369 MVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIA 428
Query: 395 TPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASG-FRPDHISFLSALSACVHAGSIKTGS 453
D V +++T Y +HG G + + F ++ S +P+ ++FLS LSAC HAG I G
Sbjct: 429 LKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGL 488
Query: 454 EFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVS 512
F LM Y + P+L+HY +VDLL R G+L A E K++P +P + G LLG C
Sbjct: 489 RIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRI 548
Query: 513 HGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCS 572
H N E + A +L ELE N+ G Y++++N++ G W ++ + R +K R + K S
Sbjct: 549 HQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAES 608
Query: 573 WIEDRDEIHKFRASDRSHDRSEEIYTII 600
IE R ++H+F A D H E +Y ++
Sbjct: 609 LIEIRRKVHRFVADDELHPEKEPVYGLL 636
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 105/394 (26%), Positives = 192/394 (48%), Gaps = 13/394 (3%)
Query: 168 VGYCEN-GNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDG 226
+G+C + +AR++F +M +R + WN+++ ++E F + RD
Sbjct: 1 MGFCRKFSSSVDARQMFGEM----TKRSLYQWNTLLKSLSREKQWEEVLYHFSHMF-RDE 55
Query: 227 IEPTSFTFGSVLIACADMNSLRKGKEIHALAIA-LGLQSDTFVGGALVEMYCRYQDLVAA 285
+P +FT L AC ++ + G+ IH + L SD +VG +L+ MY + ++ A
Sbjct: 56 EKPDNFTLPVALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEA 115
Query: 286 QMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEM-LSLDLTPDIYTVGIILSACSS 344
FDE+E + + GFE N + A++ F M ++ D+TPD T+ ++SAC+
Sbjct: 116 LRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTK 175
Query: 345 LATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAM 404
L+ G+ VH + IR G+ +D+ + +L++ YAK + K A +K I+ D++S + +
Sbjct: 176 LSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTV 235
Query: 405 LTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDV 464
+ Y +G E + F ++ G P+ + L L AC A ++ G + +L +
Sbjct: 236 IACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGL 295
Query: 465 KPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAAD 524
+ +K T +VD+ + EAY +IP D V W AL+ G +G + I
Sbjct: 296 ETEVKVSTALVDMYMKCFSPEEAYAVFSRIP-RKDVVSWVALISGFTLNG-MAHRSIEEF 353
Query: 525 RLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQ 558
++ LE N + +++ + G S+L Q
Sbjct: 354 SIMLLENNTRPDAILMVKVL---GSCSELGFLEQ 384
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 103/394 (26%), Positives = 171/394 (43%), Gaps = 47/394 (11%)
Query: 27 NSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQ 86
NS++ A + EA+ + ++ D ++SWS VI + QNG EA+ + M
Sbjct: 202 NSLLNCYAKSRAFKEAVNLFKMIAEKD-----VISWSTVIACYVQNGAAAEALLVFNDMM 256
Query: 87 AEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDML 146
+G EPN T+ VL ACA L G++ H R G + V LVD+Y +C
Sbjct: 257 DDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPE 316
Query: 147 SALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYV 206
A +FS+ K+ VS +I G+ NG M H +
Sbjct: 317 EAYAVFSRIPRKDVVSWVALISGFTLNG-----------MAHRSI--------------- 350
Query: 207 DNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDT 266
E FS+ +L+ + P + VL +C+++ L + K H+ I G S+
Sbjct: 351 ------EEFSI---MLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNP 401
Query: 267 FVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEML-S 325
F+G +LVE+Y R L A F+ I + ++ G+ + A++ F+ M+ S
Sbjct: 402 FIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKS 461
Query: 326 LDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR-CGYDSDVHIGTALVDMYAKCGSLK 384
++ P+ T ILSACS + G ++ + ++ LVD+ + G L
Sbjct: 462 SEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLD 521
Query: 385 HARLAYKRI---STPDLVSQNAMLTAYAMHGHGK 415
A KR+ TP ++ +L A +H +G+
Sbjct: 522 TAIEITKRMPFSPTPQIL--GTLLGACRIHQNGE 553
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 108/226 (47%), Gaps = 37/226 (16%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC S ++A VF +P +D VSW ++++ NG+ ++E M +N P+ +
Sbjct: 308 MYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAI 367
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
V+G ++ G+ E+A K FH Y+
Sbjct: 368 LMVKVLGSCSELGFLEQA-----------------------------------KCFHSYV 392
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ GF SNPF+ LV++Y RCG + +A K+F+ ++K+ V ++I GY +G +A
Sbjct: 393 IKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKAL 452
Query: 181 ELFDQM-EHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRD 225
E F+ M + V+ +++ S++S L E +F+ L++ D
Sbjct: 453 ETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFK-LMVND 497
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 81/191 (42%), Gaps = 43/191 (22%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y +CGSL +A KVF + +D V W S++T +G +ALE M PN V
Sbjct: 410 LYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEV 469
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEG--LEPNARTLSSVLPACARLQKLSLGKEFHG 118
++ +++ + G E + +F++ L PN L+ ++
Sbjct: 470 TFLSILSACSHAGLIHEGL-RIFKLMVNDYRLAPN-------------LEHYAV------ 509
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYC---ENGN 175
LVD+ R GD+ +A++I + ++G C +NG
Sbjct: 510 ----------------LVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGE 553
Query: 176 VAE--ARELFD 184
+AE A++LF+
Sbjct: 554 MAETVAKKLFE 564
>gi|255551609|ref|XP_002516850.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543938|gb|EEF45464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 623
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 187/609 (30%), Positives = 314/609 (51%), Gaps = 46/609 (7%)
Query: 27 NSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQ 86
S ++A ++G ++ A + + M + D V+W+++I ++Q G+ +EA+ + ++M+
Sbjct: 9 TSKISALGSSGYIVHARKLFDEMPNRDT-----VAWNSMITSYSQLGFHQEALSIFYQMR 63
Query: 87 AEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDML 146
+P+ T ++ L ACA G + H + G+ S+ V N L+D+Y +C D
Sbjct: 64 NTNTKPDHFTFTATLSACAGAGSFPFGTKIHALVIILGYHSSLPVNNSLIDMYGKCFDAF 123
Query: 147 SALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYV 206
SA ++F + NEVS +++ Y +G +EA E+F+ M ++ I+WN+MI+G
Sbjct: 124 SAGQVFKEMGDINEVSWCSLLFAYTNSGRFSEASEIFNLMP----RKFEIAWNTMIAGLG 179
Query: 207 DNSLYDEAFSMFRDLLMRDGI-EPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSD 265
+ MFR+ MR+ + EP +T+ +++ AC + G +H L I G S
Sbjct: 180 RYGEIELCLDMFRE--MRESLLEPDQWTYSALISACTESLEFLSGCMLHGLVIRSGWSSA 237
Query: 266 TFVGGALVEMYCRYQDLVAA-----------QMAFDEIENIENLLGKMKEDGF------E 308
+++ +Y ++ L A Q++++ I + +G + E E
Sbjct: 238 MEAKNSILSLYAKFGSLNDALKVVESTGRLTQVSWNAIIDAYMKVGYVNEAYLMFQSLPE 297
Query: 309 PNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV 354
N+ +W +M + F M S PD +T G +L ACSSLA + G+ V
Sbjct: 298 KNIVSWTSMITGYARNGYGEEALRFFVAMASNCFLPDDFTFGAVLHACSSLAVLGHGRMV 357
Query: 355 HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHG 414
H AIR G+ + +++G LV+MYAKCG L + LA+ I DLVS NA+L A+ +HG
Sbjct: 358 HGCAIRNGFSTYLYVGNGLVNMYAKCGDLDGSILAFHDICAKDLVSFNALLFAFGLHGKA 417
Query: 415 KEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTC 473
E + + ++ G +PD ++F+ L C H+G I+ G FF+ M + + + H C
Sbjct: 418 SEALQLYEDMMTCGTKPDKMTFIGLLMTCSHSGLIEEGRLFFNSMKSVHGLSYEADHVAC 477
Query: 474 MVDLLSRAGELGEAYEFIKKIPMAPD--SVMWGALLGGCVSHGNLEFGQIAADRLIELEP 531
MVD+L R G L EA E +KK D + ALLG C +HG +E G L LEP
Sbjct: 478 MVDMLGRGGYLAEAKELVKKYSKTSDVEASSCEALLGACSAHGEVEMGTYLGKTLKTLEP 537
Query: 532 NNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHD 591
N +YV+ +NL+ G+W + R+ M D + K PGCSWIE R+++ F A + +
Sbjct: 538 NKEISYVLQSNLYCVRGQWKEAEMVRKAMVDEGLKKMPGCSWIEVRNKVTAFVAGNHLYP 597
Query: 592 RSEEIYTII 600
++E+Y +
Sbjct: 598 YTDELYKTL 606
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 129/427 (30%), Positives = 200/427 (46%), Gaps = 26/427 (6%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKC A +VFK M + + VSW S++ A +G EA E M +
Sbjct: 115 MYGKCFDAFSAGQVFKEMGDINEVSWCSLLFAYTNSGRFSEASEIFNLMPRKFE-----I 169
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+ +I G + G E + M M+ LEP+ T S+++ AC + G HG +
Sbjct: 170 AWNTMIAGLGRYGEIELCLDMFREMRESLLEPDQWTYSALISACTESLEFLSGCMLHGLV 229
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R+G+ S N ++ +Y + G + ALK+ +VS N II Y + G V EA
Sbjct: 230 IRSGWSSAMEAKNSILSLYAKFGSLNDALKVVESTGRLTQVSWNAIIDAYMKVGYVNEAY 289
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+F + ++ I+SW SMI+GY N +EA F + + P FTFG+VL A
Sbjct: 290 LMFQSLP----EKNIVSWTSMITGYARNGYGEEALRFFVA-MASNCFLPDDFTFGAVLHA 344
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C+ + L G+ +H AI G + +VG LV MY + DL + +AF +I + +
Sbjct: 345 CSSLAVLGHGRMVHGCAIRNGFSTYLYVGNGLVNMYAKCGDLDGSILAFHDICAKDLVSF 404
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG-------KQ 353
F + A+QL+ +M++ PD T +L CS +E G K
Sbjct: 405 NALLFAFGLHGKASEALQLYEDMMTCGTKPDKMTFIGLLMTCSHSGLIEEGRLFFNSMKS 464
Query: 354 VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHAR---LAYKRISTPDLVSQNAMLTAYAM 410
VH + Y++D H+ +VDM + G L A+ Y + S + S A+L A +
Sbjct: 465 VHGLS----YEAD-HVA-CMVDMLGRGGYLAEAKELVKKYSKTSDVEASSCEALLGACSA 518
Query: 411 HGHGKEG 417
HG + G
Sbjct: 519 HGEVEMG 525
>gi|225438700|ref|XP_002277701.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial [Vitis vinifera]
Length = 1008
Score = 318 bits (814), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 184/588 (31%), Positives = 294/588 (50%), Gaps = 103/588 (17%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y CG L + K+F+ MP R N +S
Sbjct: 503 YSDCGKLSSSFKLFQKMPLR------------------------------------NAIS 526
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W+ +I G NG ++A+ +L +MQ E +E + TL S++P C + L G HGY
Sbjct: 527 WNTLISGCVHNGDTKKAVALLHKMQQEKMELDLVTLISIIPICRVAENLIQGMTLHGYAI 586
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
+ GF + +VN L+ +Y CGD + +
Sbjct: 587 KTGFACDVSLVNALISMYFNCGD-------------------------------INAGKF 615
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
LF+ M R I+SWN++I+GY + L +E + F ++ R+G +P T ++L +C
Sbjct: 616 LFEVMP----WRSIVSWNALITGYRFHYLQNEVMASFCQMI-REGQKPNYVTLLNLLPSC 670
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK 301
+L +GK IHA A+ G+ +T + +L+ MY R+ ENI + +
Sbjct: 671 ---RTLLQGKSIHAFAVRTGVIVETPIITSLISMYARF-------------ENINSFIF- 713
Query: 302 MKEDGFEPNVYTWNAMQ--------------LFSEMLSLDLTPDIYTVGIILSACSSLAT 347
+ E G + ++ WNA+ F E+L + PD T ++SAC L++
Sbjct: 714 LFEMGGKEDIALWNAIMSVYVQTKNAKESVTFFCELLHARVEPDYITFLSLISACVQLSS 773
Query: 348 MERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTA 407
+ V AY I+ G+D + I AL+D++A+CG++ A+ ++ +S+ D VS + M+
Sbjct: 774 LNLSNSVMAYVIQKGFDKHIVISNALIDLFARCGNISIAKKIFEGLSSKDAVSWSTMING 833
Query: 408 YAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPS 467
Y +HG + +A ++ SG +PD I++ S LSAC H G I G F+ M V
Sbjct: 834 YGLHGDSEAALALLSQMRLSGMKPDGITYASVLSACSHGGFIDQGWMIFNSMVEEGVPRR 893
Query: 468 LKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLI 527
++HY CMVDLL R G+L EAY+F++K+P P + +LLG C+ HGN++ G+ + L
Sbjct: 894 MEHYACMVDLLGRTGQLNEAYDFVEKLPCKPSVSLLESLLGACIIHGNVKLGEKISSLLF 953
Query: 528 ELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIE 575
EL+P N+G+YVML N++A AGRW D R R M++R++ K PG S +E
Sbjct: 954 ELDPKNSGSYVMLYNIYAAAGRWMDANRVRSDMEERQLRKIPGFSLVE 1001
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 138/531 (25%), Positives = 246/531 (46%), Gaps = 44/531 (8%)
Query: 14 VFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNG 73
V + E + V ++V A G +++A L+++S P+LV+W+A+I G++ NG
Sbjct: 181 VLRTSFEENLVIQTALVDFYAKTGRMVKARLVLDKISQ-----PDLVTWNALISGYSLNG 235
Query: 74 YDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVN 133
+D+E +L ++ GL+PN T +S++P C R++ L +GK HG++ ++GF S+ F+
Sbjct: 236 FDKEVFEVLRQINEMGLKPNVSTFASIIPLCTRMKCLDIGKSIHGFVVKSGFSSDEFLTP 295
Query: 134 GLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQR 193
L+ +Y GN+ AR+LFD ++
Sbjct: 296 ALISMY-------------------------------AGGGNLFIARDLFDS----AAEK 320
Query: 194 GIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEI 253
++ WNSMIS Y N EAF MF+ +L + ++P TF S++ C + + GK +
Sbjct: 321 NVVIWNSMISAYAQNQKSSEAFKMFQQML-KANMQPNVVTFVSIIPCCENSANFWYGKSL 379
Query: 254 HALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYT 313
HA + L S V AL+ MY + DL +A F ++ L G+ N
Sbjct: 380 HAHVMKYRLDSQLSVATALLSMYAKLGDLNSADFIFYQMPRRNLLSWNSMISGYGHNGLW 439
Query: 314 WNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTAL 373
+M F +M PD ++ ILSACS L + GK HA++ R +DS+++I AL
Sbjct: 440 EASMDAFCDMQFEGFDPDAISIVNILSACSKLEAILLGKAAHAFSFRKEFDSNLNISNAL 499
Query: 374 VDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDH 433
+ Y+ CG L + ++++ + +S N +++ +G K+ +A ++ D
Sbjct: 500 LAFYSDCGKLSSSFKLFQKMPLRNAISWNTLISGCVHNGDTKKAVALLHKMQQEKMELDL 559
Query: 434 ISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKK 493
++ +S + C A ++ G + ++ + G++ A +F+ +
Sbjct: 560 VTLISIIPICRVAENLIQGMTLHGYAIKTGFACDVSLVNALISMYFNCGDIN-AGKFLFE 618
Query: 494 IPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLF 544
+ V W AL+ G H L+ ++ A + NYV L NL
Sbjct: 619 VMPWRSIVSWNALITGYRFH-YLQ-NEVMASFCQMIREGQKPNYVTLLNLL 667
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 128/522 (24%), Positives = 229/522 (43%), Gaps = 52/522 (9%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVT----AC---AANGLVLEALECLERMSSLD 53
++ C ++++ K + ++ RD + VV +C A L L A E +E+
Sbjct: 63 LFDLCRNIENLKPLGSVLIVRDLMRDEYVVAEFIISCFHLGAPELALSAFEAIEK----- 117
Query: 54 NETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLG 113
P++ + +I +G E+ + + + + G + T V+ AC L + +
Sbjct: 118 ---PSVFLQNLMIRRLCDHGLFEDVLCVYLKCRVLGCPSDDFTFPFVIKACTALGAVWIA 174
Query: 114 KEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCEN 173
+ H + R F N + LVD Y + G M+ A + K S
Sbjct: 175 EGVHCIVLRTSFEENLVIQTALVDFYAKTGRMVKARLVLDKIS----------------- 217
Query: 174 GNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFT 233
Q +++WN++ISGY N E F + R + G++P T
Sbjct: 218 ------------------QPDLVTWNALISGYSLNGFDKEVFEVLRQI-NEMGLKPNVST 258
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
F S++ C M L GK IH + G SD F+ AL+ MY +L A+ FD
Sbjct: 259 FASIIPLCTRMKCLDIGKSIHGFVVKSGFSSDEFLTPALISMYAGGGNLFIARDLFDSAA 318
Query: 294 NIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ 353
++ + N + A ++F +ML ++ P++ T I+ C + A GK
Sbjct: 319 EKNVVIWNSMISAYAQNQKSSEAFKMFQQMLKANMQPNVVTFVSIIPCCENSANFWYGKS 378
Query: 354 VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGH 413
+HA+ ++ DS + + TAL+ MYAK G L A + ++ +L+S N+M++ Y +G
Sbjct: 379 LHAHVMKYRLDSQLSVATALLSMYAKLGDLNSADFIFYQMPRRNLLSWNSMISGYGHNGL 438
Query: 414 GKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTC 473
+ + F + GF PD IS ++ LSAC +I G + +L
Sbjct: 439 WEASMDAFCDMQFEGFDPDAISIVNILSACSKLEAILLGKAAHAFSFRKEFDSNLNISNA 498
Query: 474 MVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
++ S G+L +++ +K+P+ +++ W L+ GCV +G+
Sbjct: 499 LLAFYSDCGKLSSSFKLFQKMPLR-NAISWNTLISGCVHNGD 539
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 75/187 (40%), Gaps = 57/187 (30%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
++ +CG++ AKK+F+ + +D VSW
Sbjct: 802 LFARCGNISIAKKIFEGLSSKDAVSW---------------------------------- 827
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
S +I G+ +G E A+ +L +M+ G++P+ T +SVL AC+ G+I
Sbjct: 828 --STMINGYGLHGDSEAALALLSQMRLSGMKPDGITYASVLSACSH----------GGFI 875
Query: 121 TRNGFMSNPFVVNG----------LVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGY 170
+ + N V G +VD+ R G + A K K VS ++G
Sbjct: 876 DQGWMIFNSMVEEGVPRRMEHYACMVDLLGRTGQLNEAYDFVEKLPCKPSVSLLESLLGA 935
Query: 171 C-ENGNV 176
C +GNV
Sbjct: 936 CIIHGNV 942
>gi|357449413|ref|XP_003594983.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484031|gb|AES65234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 702
Score = 318 bits (814), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 179/549 (32%), Positives = 296/549 (53%), Gaps = 39/549 (7%)
Query: 57 PNLVSWSAVIGGFTQNGYDEEAIGMLF-RMQAEGLEPNARTLSSVLPACARLQKLSLGKE 115
PN +++ ++ T +D L+ +M+ + PN T V ACA L+++ + +
Sbjct: 79 PNDYAFNIMLRATTTTWHDYPLTLHLYHQMKTLNISPNNFTFPFVFLACANLEEIRMARL 138
Query: 116 FHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGN 175
H + + G ++ VN +V +Y RCG ENG
Sbjct: 139 AHCEVFKLGLDNDHHTVNSMVTMYFRCG----------------------------ENG- 169
Query: 176 VAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFG 235
AR++FD++ ++ ++SWNS++SGY EA +F L G EP +
Sbjct: 170 --VARKVFDEI----TEKDLVSWNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEMSLV 223
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
SVL AC ++ L G+ + + G++ ++++G AL+ MY + +LV+++ FD + +
Sbjct: 224 SVLGACGELGDLELGRWVEGFVVERGMKVNSYIGSALISMYSKCGELVSSRRIFDGMPSR 283
Query: 296 ENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVH 355
+ + + N A+ LF M + P+ T+ +LSAC+S+ ++ GKQ+
Sbjct: 284 DFITWNAAISAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALDLGKQMD 343
Query: 356 AYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGK 415
YA G D+ + TAL+DMYAKCGSL+ A+ + + + S NAM++A A HG K
Sbjct: 344 EYATHRGLQHDIFVATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISALASHGKAK 403
Query: 416 EGIAHFRRILASG--FRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYT 472
E ++ F R+ G RP+ I+F+S LSACVHAG + G FD+M+ + + P ++HY+
Sbjct: 404 EALSLFERMSDEGGSARPNDITFVSLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYS 463
Query: 473 CMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPN 532
CMVDLLSRAG L EA++ I+K+P PD+V GAL C N++ G+ L+EL+P+
Sbjct: 464 CMVDLLSRAGHLYEAWDVIEKMPEKPDNVTLGALHSACQRKKNVDIGERVIQMLLELDPS 523
Query: 533 NTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDR 592
N+GNY++ + ++ W D AR R M++ + K+PGCSWIE +++ +F + D
Sbjct: 524 NSGNYIISSKIYENLNMWDDAARMRALMRENGVTKTPGCSWIEVGNQLREFLSGDGLTLD 583
Query: 593 SEEIYTIID 601
S ++ IID
Sbjct: 584 SIDVRNIID 592
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 106/418 (25%), Positives = 190/418 (45%), Gaps = 59/418 (14%)
Query: 5 CGSLDDAK-------KVFKMMPERDCVSWNSVVTA---CAANGLVLEALECLERMSSLDN 54
C +L++ + +VFK+ + D + NS+VT C NG+ A + + ++ D
Sbjct: 127 CANLEEIRMARLAHCEVFKLGLDNDHHTVNSMVTMYFRCGENGV---ARKVFDEITEKD- 182
Query: 55 ETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLG 113
LVSW++++ G+ + G+ EA+ + R++ E G EP+ +L SVL AC L L LG
Sbjct: 183 ----LVSWNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELG 238
Query: 114 KEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCEN 173
+ G++ G N ++ + L+ +Y +CG+++S+ +IF ++ ++ N I Y +N
Sbjct: 239 RWVEGFVVERGMKVNSYIGSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQN 298
Query: 174 GNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFT 233
G EA LF M+ +G++P T
Sbjct: 299 GMADEAISLFHSMK------------------------------------ENGVDPNKVT 322
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
+VL ACA + +L GK++ A GLQ D FV AL++MY + L +AQ F+++
Sbjct: 323 LTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDMYAKCGSLESAQRVFNDMP 382
Query: 294 NIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSL--DLTPDIYTVGIILSACSSLATMERG 351
+ + A+ LF M P+ T +LSAC ++ G
Sbjct: 383 RKNDASWNAMISALASHGKAKEALSLFERMSDEGGSARPNDITFVSLLSACVHAGLVDEG 442
Query: 352 KQVH-AYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRI-STPDLVSQNAMLTA 407
++ + G + + +VD+ ++ G L A +++ PD V+ A+ +A
Sbjct: 443 YRLFDMMSTLFGLVPKIEHYSCMVDLLSRAGHLYEAWDVIEKMPEKPDNVTLGALHSA 500
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 109/231 (47%), Gaps = 38/231 (16%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG L ++++F MP RD ++WN
Sbjct: 263 MYSKCGELVSSRRIFDGMPSRDFITWN--------------------------------- 289
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
A I + QNG +EAI + M+ G++PN TL++VL ACA + L LGK+ Y
Sbjct: 290 ---AAISAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALDLGKQMDEYA 346
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
T G + FV L+D+Y +CG + SA ++F+ KN+ S N +I +G EA
Sbjct: 347 THRGLQHDIFVATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISALASHGKAKEAL 406
Query: 181 ELFDQMEHLG--VQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEP 229
LF++M G + I++ S++S V L DE + +F + G+ P
Sbjct: 407 SLFERMSDEGGSARPNDITFVSLLSACVHAGLVDEGYRLFDMMSTLFGLVP 457
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNET-PNL 59
MY KCGSL+ A++VF MP ++ SWN++++A A++G EAL ERMS PN
Sbjct: 364 MYAKCGSLESAQRVFNDMPRKNDASWNAMISALASHGKAKEALSLFERMSDEGGSARPND 423
Query: 60 VSWSAVIGGFTQNGYDEEAIGMLFRMQAE--GLEPNARTLSSVLPACAR 106
+++ +++ G +E LF M + GL P S ++ +R
Sbjct: 424 ITFVSLLSACVHAGLVDEGY-RLFDMMSTLFGLVPKIEHYSCMVDLLSR 471
>gi|15231798|ref|NP_190904.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174119|sp|Q9LFI1.1|PP280_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53360, mitochondrial; Flags: Precursor
gi|6729487|emb|CAB67643.1| putative protein [Arabidopsis thaliana]
gi|332645554|gb|AEE79075.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 768
Score = 318 bits (814), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 198/681 (29%), Positives = 319/681 (46%), Gaps = 130/681 (19%)
Query: 1 MYGKCGSLDDAKKVFKMMPER-----------------------------------DCVS 25
MYGKCGSL DA++VF MPER D +
Sbjct: 111 MYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFA 170
Query: 26 WNSVVTACAANGLVLEALECLERMSSLDNET----------------------------- 56
+ S++ ACA++ V + ++ L++ +
Sbjct: 171 FGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIP 230
Query: 57 -PNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGL-EPNARTLSSVLPACARLQKLSLGK 114
+L+SWS++I GF+Q G++ EA+ L M + G+ PN S L AC+ L + G
Sbjct: 231 MKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGS 290
Query: 115 EFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
+ HG ++ N L D+Y RCG + SA
Sbjct: 291 QIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSA-------------------------- 324
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTF 234
R +FDQ+E + SWN +I+G +N DEA S+F + G P + +
Sbjct: 325 -----RRVFDQIE----RPDTASWNVIIAGLANNGYADEAVSVFSQM-RSSGFIPDAISL 374
Query: 235 GSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIEN 294
S+L A +L +G +IH+ I G +D V +L+ MY DL F++ N
Sbjct: 375 RSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRN 434
Query: 295 IENLLGKMKEDGFEPNVYTWNA--------------MQLFSEMLSLDLTPDIYTVGIILS 340
+ +WN ++LF ML + PD T+G +L
Sbjct: 435 -------------NADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLR 481
Query: 341 ACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVS 400
C +++++ G QVH Y+++ G + I L+DMYAKCGSL AR + + D+VS
Sbjct: 482 GCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVS 541
Query: 401 QNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM- 459
+ ++ YA G G+E + F+ + ++G P+H++F+ L+AC H G ++ G + + M
Sbjct: 542 WSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQ 601
Query: 460 AYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFG 519
+ + P+ +H +C+VDLL+RAG L EA FI ++ + PD V+W LL C + GN+
Sbjct: 602 TEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLA 661
Query: 520 QIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDE 579
Q AA+ +++++P N+ +V+L ++ A +G W + A R MK + K PG SWIE D+
Sbjct: 662 QKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDK 721
Query: 580 IHKFRASDRSHDRSEEIYTII 600
IH F A D H ++IYT++
Sbjct: 722 IHIFFAEDIFHPERDDIYTVL 742
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 115/443 (25%), Positives = 192/443 (43%), Gaps = 37/443 (8%)
Query: 72 NGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFV 131
N Y E F + + RT S++ AC+ + L+ G++ H +I + + +
Sbjct: 45 NFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTIL 104
Query: 132 VNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGV 191
N ++ +Y +CG + A ++F +N VS ++I GY +NG AEA L+ +M
Sbjct: 105 NNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKM----- 159
Query: 192 QRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGK 251
+++ + P F FGS++ ACA + + GK
Sbjct: 160 -------------------------------LQEDLVPDQFAFGSIIKACASSSDVGLGK 188
Query: 252 EIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNV 311
++HA I L S AL+ MY R+ + A F I + + GF
Sbjct: 189 QLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLG 248
Query: 312 YTWNAMQLFSEMLSLDL-TPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIG 370
+ + A+ EMLS + P+ Y G L ACSSL + G Q+H I+ + G
Sbjct: 249 FEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAG 308
Query: 371 TALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFR 430
+L DMYA+CG L AR + +I PD S N ++ A +G+ E ++ F ++ +SGF
Sbjct: 309 CSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFI 368
Query: 431 PDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEF 490
PD IS S L A ++ G + + + L ++ + + +L +
Sbjct: 369 PDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNL 428
Query: 491 IKKIPMAPDSVMWGALLGGCVSH 513
+ DSV W +L C+ H
Sbjct: 429 FEDFRNNADSVSWNTILTACLQH 451
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 146/318 (45%), Gaps = 4/318 (1%)
Query: 199 NSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAI 258
N I+ ++ Y EA F + T+ S++ AC+ SL +G++IH +
Sbjct: 35 NDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHIL 94
Query: 259 ALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKE-DGFEPNVYTWNAM 317
+ DT + ++ MY + L A+ FD + NL+ G+ N A+
Sbjct: 95 NSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPE-RNLVSYTSVITGYSQNGQGAEAI 153
Query: 318 QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMY 377
+L+ +ML DL PD + G I+ AC+S + + GKQ+HA I+ S + AL+ MY
Sbjct: 154 RLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMY 213
Query: 378 AKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASG-FRPDHISF 436
+ + A + I DL+S ++++ ++ G E ++H + +L+ G F P+ F
Sbjct: 214 VRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIF 273
Query: 437 LSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPM 496
S+L AC GS+ L ++ + + D+ +R G L A +I
Sbjct: 274 GSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIE- 332
Query: 497 APDSVMWGALLGGCVSHG 514
PD+ W ++ G ++G
Sbjct: 333 RPDTASWNVIIAGLANNG 350
>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 766
Score = 318 bits (814), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 200/664 (30%), Positives = 323/664 (48%), Gaps = 95/664 (14%)
Query: 4 KCGSLDDAKKVFKMMPERDCVSW-------------------------------NSVVTA 32
K + + K + + D V W N++++
Sbjct: 30 KPSTRNQPKTTSSLATDADIVKWNIAITNHMRNGQCDSALRLFNSMPRRSSISWNAMISG 89
Query: 33 CAANGLVLEALECLERMSSLD------------------------NETP--NLVSWSAVI 66
C +N A + E+M + D ++ P ++VSW+A++
Sbjct: 90 CLSNDKFYLARQLFEKMPTRDLVSWNVMISGCVRYRNLRAARLLFDQMPERDVVSWNAML 149
Query: 67 GGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACAR------LQKLSLGKEFHGYI 120
G+ QNGY +EA + M + N+ + + +L A + ++L K I
Sbjct: 150 SGYAQNGYVKEAKEIFDEMPCK----NSISWNGMLAAYVQNGRIEDARRLFESKADWELI 205
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ N M N LVD A IF + ++EVS NT+I GY +NG + EA+
Sbjct: 206 SWNCMMGGYVKRNRLVD----------ARGIFDRMPERDEVSWNTMISGYAQNGELLEAQ 255
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGI-EPTSFTFGSVLI 239
LF++ R + +W +M+SGYV N + DEA +F DG+ E S ++ +++
Sbjct: 256 RLFEE----SPVRDVFTWTAMVSGYVQNGMLDEARRVF------DGMPEKNSVSWNAIIA 305
Query: 240 ACADMNSLRKGKEIHALAIALGLQS-DTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
+ + +E+ + S +T + G Y + D+ A+ FD + +++
Sbjct: 306 GYVQCKRMDQARELFEAMPCQNVSSWNTMITG-----YAQNGDIAQARNFFDRMPQRDSI 360
Query: 299 LGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYA 358
G+ + Y A+ LF EM + T LS C+ +A +E GKQVH
Sbjct: 361 SWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRV 420
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGI 418
++ G +S ++G AL+ MY KCG++ A + ++ I ++VS N M+ YA HG GKE +
Sbjct: 421 VKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEAL 480
Query: 419 AHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDL 477
F + +G PD ++ + LSAC H G + G+E+F M Y + + KHYTCM+DL
Sbjct: 481 MLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDL 540
Query: 478 LSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNY 537
L RAG L +A +K +P PD+ WGALLG HGN E G+ AA + E+EP+N+G Y
Sbjct: 541 LGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIFEMEPDNSGMY 600
Query: 538 VMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
V+L+NL+A +GRW D+ R R +M+DR + K PG SW+E +++IH F D H + IY
Sbjct: 601 VLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQNKIHTFTVGDSVHPERDRIY 660
Query: 598 TIID 601
T ++
Sbjct: 661 TFLE 664
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 138/479 (28%), Positives = 231/479 (48%), Gaps = 44/479 (9%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y + G + +AK++F MP ++ +SWN ++ A NG + +A E S D E L+S
Sbjct: 152 YAQNGYVKEAKEIFDEMPCKNSISWNGMLAAYVQNGRIEDARRLFE--SKADWE---LIS 206
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W+ ++GG+ + +A G+ RM E E + T+ S L L + F
Sbjct: 207 WNCMMGGYVKRNRLVDARGIFDRM-PERDEVSWNTMISGYAQNGEL--LEAQRLFEESPV 263
Query: 122 RNGF----MSNPFVVNGLVDVYRR----------------------CGDMLSALKIFSKF 155
R+ F M + +V NG++D RR C M A ++F
Sbjct: 264 RDVFTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAM 323
Query: 156 SIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAF 215
+N S NT+I GY +NG++A+AR FD+M QR ISW ++I+GY + +EA
Sbjct: 324 PCQNVSSWNTMITGYAQNGDIAQARNFFDRMP----QRDSISWAAIIAGYAQSGYGEEAL 379
Query: 216 SMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEM 275
+F + + RDG TF S L CA++ +L GK++H + GL+S +VG AL+ M
Sbjct: 380 HLFVE-MKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVM 438
Query: 276 YCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTV 335
YC+ ++ A + F+ IE E + G+ + + A+ LF M + PD T+
Sbjct: 439 YCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTM 498
Query: 336 GIILSACSSLATMERGKQ-VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS 394
+LSACS +++G + ++ G ++ T ++D+ + G L A+ K +
Sbjct: 499 VGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMP 558
Query: 395 -TPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTG 452
PD + A+L A +HG+ + G + I PD+ S + L + ++A S + G
Sbjct: 559 FEPDAATWGALLGASRIHGNTELGEKAAKMIFE--MEPDN-SGMYVLLSNLYAASGRWG 614
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 2/111 (1%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG++DDA VF+ + E++ VSWN+++ A +G EAL E M P+ V
Sbjct: 438 MYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKT-GILPDDV 496
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRM-QAEGLEPNARTLSSVLPACARLQKL 110
+ V+ + G ++ + M Q G+ N++ + ++ R +L
Sbjct: 497 TMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRL 547
>gi|356540705|ref|XP_003538826.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g50420-like [Glycine max]
Length = 715
Score = 317 bits (813), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 201/664 (30%), Positives = 318/664 (47%), Gaps = 102/664 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVV------------------TACAANGL---- 38
MY +CGSL D+ VF MP R VS+N+++ T NGL
Sbjct: 57 MYARCGSLTDSHLVFDKMPRRTIVSYNALLAAYSRASPNHAISALELYTQMVTNGLRPSS 116
Query: 39 -----VLEALECLER---------------------MSSLDNETPNL------------- 59
+L+A LE +SL N N
Sbjct: 117 TTFTSLLQASSLLEHWWFGSSLHAKGFKLGLNDICLQTSLLNMYSNCGDLSSAELVFWDM 176
Query: 60 -----VSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGK 114
V+W+++I G+ +N EE I + +M + G P T VL +C+RL+ G+
Sbjct: 177 VDRDHVAWNSLIMGYLKNNKIEEGIWLFIKMMSVGFAPTQFTYCMVLNSCSRLKDYRSGR 236
Query: 115 EFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
H ++ + + N LVD+Y C G
Sbjct: 237 LIHAHVIVRNVSLDLHLQNALVDMY-------------------------------CNAG 265
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTF 234
N+ A +F +ME+ ++SWNSMI+GY +N ++A ++F L +P +T+
Sbjct: 266 NMQTAYRIFSRMEN----PDLVSWNSMIAGYSENEDGEKAMNLFVQLQEMCFPKPDDYTY 321
Query: 235 GSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIEN 294
++ A S GK +HA I G + FVG LV MY + + AA F I
Sbjct: 322 AGIISATGVFPSSSYGKSLHAEVIKTGFERSVFVGSTLVSMYFKNHESDAAWRVFCSISV 381
Query: 295 IENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV 354
+ +L G+ A++ F +M+ D Y + +++AC++LA + +G+ +
Sbjct: 382 KDVVLWTEMITGYSKMTDGICAIRCFFQMVHEGHEVDDYVLSGVVNACANLAVLRQGEII 441
Query: 355 HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHG 414
H YA++ GYD ++ + +L+DMYAK GSL+ A L + ++S PDL N+ML Y+ HG
Sbjct: 442 HCYAVKLGYDVEMSVSGSLIDMYAKNGSLEAAYLVFSQVSEPDLKCWNSMLGGYSHHGMV 501
Query: 415 KEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCM 474
+E + F IL G PD ++FLS LSAC H+ ++ G ++ M + P LKHY+CM
Sbjct: 502 EEALQVFEEILKQGLIPDQVTFLSLLSACSHSRLVEQGKFLWNYMNSIGLIPGLKHYSCM 561
Query: 475 VDLLSRAGELGEAYEFIKKIPMAPDSV-MWGALLGGCVSHGNLEFGQIAADRLIELEPNN 533
V L SRA L EA E I K P D++ +W LL CV + N + G AA+ ++ L+ +
Sbjct: 562 VTLFSRAALLEEAEEIINKSPYIEDNLELWRTLLSACVINKNFKVGIHAAEEVLRLKAED 621
Query: 534 TGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRS 593
V+L+NL+A A +W +A R+ M+ + K PG SWIE +++IH F + D+SH ++
Sbjct: 622 GPTLVLLSNLYAAARKWDKVAEIRRNMRGLMLDKYPGLSWIEAKNDIHVFSSGDQSHPKA 681
Query: 594 EEIY 597
+E++
Sbjct: 682 DEVH 685
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 101/379 (26%), Positives = 178/379 (46%), Gaps = 66/379 (17%)
Query: 99 SVLPACARLQKLSLGKEFHGYI--TRNGFMS-NPFVVNGLVDVYRRCGDMLSALKIFSKF 155
S+L C+ + L ++ H I T F S +PFV N ++ +Y RCG +
Sbjct: 15 SLLQKCSTVTSLREARQLHALILTTTTAFTSQSPFVYNNILSMYARCGSL---------- 64
Query: 156 SIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAF 215
++ +FD+M +R I+S+N++++ Y S + A
Sbjct: 65 ---------------------TDSHLVFDKMP----RRTIVSYNALLAAYSRASP-NHAI 98
Query: 216 SMFR--DLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALV 273
S ++ +G+ P+S TF S+L A + + G +HA LGL +D + +L+
Sbjct: 99 SALELYTQMVTNGLRPSSTTFTSLLQASSLLEHWWFGSSLHAKGFKLGL-NDICLQTSLL 157
Query: 274 EMYCRYQDLVAAQMAF------DEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLD 327
MY DL +A++ F D + ++G +K + E ++ LF +M+S+
Sbjct: 158 NMYSNCGDLSSAELVFWDMVDRDHVAWNSLIMGYLKNNKIEEGIW------LFIKMMSVG 211
Query: 328 LTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHAR 387
P +T ++L++CS L G+ +HA+ I D+H+ ALVDMY G+++ A
Sbjct: 212 FAPTQFTYCMVLNSCSRLKDYRSGRLIHAHVIVRNVSLDLHLQNALVDMYCNAGNMQTAY 271
Query: 388 LAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGF-RPDHISFLSALSAC--- 443
+ R+ PDLVS N+M+ Y+ + G++ + F ++ F +PD ++ +SA
Sbjct: 272 RIFSRMENPDLVSWNSMIAGYSENEDGEKAMNLFVQLQEMCFPKPDDYTYAGIISATGVF 331
Query: 444 --------VHAGSIKTGSE 454
+HA IKTG E
Sbjct: 332 PSSSYGKSLHAEVIKTGFE 350
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 147/304 (48%), Gaps = 18/304 (5%)
Query: 236 SVLIACADMNSLRKGKEIHALAI----ALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDE 291
S+L C+ + SLR+ +++HAL + A QS FV ++ MY R L + + FD+
Sbjct: 15 SLLQKCSTVTSLREARQLHALILTTTTAFTSQS-PFVYNNILSMYARCGSLTDSHLVFDK 73
Query: 292 -----IENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLA 346
I + LL PN + +A++L+++M++ L P T +L A S L
Sbjct: 74 MPRRTIVSYNALLAAYSRAS--PN-HAISALELYTQMVTNGLRPSSTTFTSLLQASSLLE 130
Query: 347 TMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLT 406
G +HA + G + D+ + T+L++MY+ CG L A L + + D V+ N+++
Sbjct: 131 HWWFGSSLHAKGFKLGLN-DICLQTSLLNMYSNCGDLSSAELVFWDMVDRDHVAWNSLIM 189
Query: 407 AYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKP 466
Y + +EGI F ++++ GF P ++ L++C ++G + +V
Sbjct: 190 GYLKNNKIEEGIWLFIKMMSVGFAPTQFTYCMVLNSCSRLKDYRSGRLIHAHVIVRNVSL 249
Query: 467 SLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRL 526
L +VD+ AG + AY ++ PD V W +++ G + E G+ A +
Sbjct: 250 DLHLQNALVDMYCNAGNMQTAYRIFSRME-NPDLVSWNSMIAG---YSENEDGEKAMNLF 305
Query: 527 IELE 530
++L+
Sbjct: 306 VQLQ 309
>gi|449439011|ref|XP_004137281.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Cucumis sativus]
Length = 787
Score = 317 bits (813), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 182/555 (32%), Positives = 280/555 (50%), Gaps = 75/555 (13%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY CG + A++VF +M +R ++V
Sbjct: 228 MYMNCGKVGLARQVFNVMLKR------------------------------------SVV 251
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ +I G+ QNG EEA+ + M +EP++ T+ S LP+C L++L LG + H +
Sbjct: 252 SWNTMISGWFQNGRPEEALAVFNSMMDARVEPDSATIVSALPSCGHLKELELGIKVHKLV 311
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+N V N LVD+Y RCG M A +F AE +
Sbjct: 312 QKNHLQEKIEVRNALVDMYSRCGGMDEASLVF------------------------AETK 347
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
E + +I+W SMI+GY+ N A ++ + + DG+ P + T S+L A
Sbjct: 348 E-----------KDVITWTSMINGYIMNGNAKSALALCPAMQL-DGVVPNAVTLASLLSA 395
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA + L++GK +HA + L SD V AL++MY + + + F + +
Sbjct: 396 CASLCCLKQGKSLHAWVMRKKLDSDVLVVTALIDMYAKCNAVSYSFQVFAKTSMKRTVPW 455
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G N A+ LF ML ++ + T ++ A + LA +++ +H+Y +R
Sbjct: 456 NALLSGLIHNELAREAVGLFKSMLIEEVEANHATFNSVIPAYAILADLKQVMNLHSYLVR 515
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTP--DLVSQNAMLTAYAMHGHGKEGI 418
G+ S + + T L+DMY+KCGSL +A + I D++ + ++ Y MHGHG+ +
Sbjct: 516 SGFISKIAVITGLIDMYSKCGSLDYAHKIFDEIPNKEKDIIVWSVLIAGYGMHGHGETAV 575
Query: 419 AHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDL 477
F +++ SG +P+ I+F S L AC H G + G F M Y P HYTC+VDL
Sbjct: 576 LLFNQMVHSGMQPNEITFTSVLHACSHRGLVDDGLTLFKYMIENYPSSPLPNHYTCVVDL 635
Query: 478 LSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNY 537
L RAG L EAY+ IK +P + +WGALLG C+ H N+E G++AA+RL ELEP +TGNY
Sbjct: 636 LGRAGRLDEAYDLIKSMPFQQNHSIWGALLGACLIHQNVELGEVAAERLFELEPESTGNY 695
Query: 538 VMLANLFAYAGRWSD 552
++LAN++A GRW D
Sbjct: 696 ILLANIYAAVGRWKD 710
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 132/484 (27%), Positives = 227/484 (46%), Gaps = 40/484 (8%)
Query: 53 DNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEG-LEPNARTLSSVLPACARLQKLS 111
D P+L W+A+I + G+ +A+ + M G P+ T V+ AC+ + L+
Sbjct: 142 DLSDPSLFLWNAIIKMYVDKGFHFDALRVFDSMICSGKCWPDKYTFPLVIKACSVMSMLN 201
Query: 112 LGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYC 171
+G HG +GF SN FV N L+ +Y CG
Sbjct: 202 VGVLIHGRALVSGFSSNMFVQNSLLAMYMNCG---------------------------- 233
Query: 172 ENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTS 231
V AR++F+ M ++R ++SWN+MISG+ N +EA ++F + M +EP S
Sbjct: 234 ---KVGLARQVFNVM----LKRSVVSWNTMISGWFQNGRPEEALAVFNSM-MDARVEPDS 285
Query: 232 FTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDE 291
T S L +C + L G ++H L LQ V ALV+MY R + A + F E
Sbjct: 286 ATIVSALPSCGHLKELELGIKVHKLVQKNHLQEKIEVRNALVDMYSRCGGMDEASLVFAE 345
Query: 292 IENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG 351
+ + + +G+ N +A+ L M + P+ T+ +LSAC+SL +++G
Sbjct: 346 TKEKDVITWTSMINGYIMNGNAKSALALCPAMQLDGVVPNAVTLASLLSACASLCCLKQG 405
Query: 352 KQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMH 411
K +HA+ +R DSDV + TAL+DMYAKC ++ ++ + + S V NA+L+ +
Sbjct: 406 KSLHAWVMRKKLDSDVLVVTALIDMYAKCNAVSYSFQVFAKTSMKRTVPWNALLSGLIHN 465
Query: 412 GHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHY 471
+E + F+ +L +H +F S + A +K + +
Sbjct: 466 ELAREAVGLFKSMLIEEVEANHATFNSVIPAYAILADLKQVMNLHSYLVRSGFISKIAVI 525
Query: 472 TCMVDLLSRAGELGEAYEFIKKIP-MAPDSVMWGALLGGCVSHGNLEFGQIAADRLIE-- 528
T ++D+ S+ G L A++ +IP D ++W L+ G HG+ E + ++++
Sbjct: 526 TGLIDMYSKCGSLDYAHKIFDEIPNKEKDIIVWSVLIAGYGMHGHGETAVLLFNQMVHSG 585
Query: 529 LEPN 532
++PN
Sbjct: 586 MQPN 589
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/398 (26%), Positives = 178/398 (44%), Gaps = 15/398 (3%)
Query: 168 VGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGI 227
V Y G V AR+LFD + + WN++I YVD + +A +F ++
Sbjct: 125 VSYAFCGCVPLARKLFDDLS----DPSLFLWNAIIKMYVDKGFHFDALRVFDSMICSGKC 180
Query: 228 EPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQM 287
P +TF V+ AC+ M+ L G IH A+ G S+ FV +L+ MY + A+
Sbjct: 181 WPDKYTFPLVIKACSVMSMLNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGKVGLARQ 240
Query: 288 AFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLAT 347
F+ + + G+ N A+ +F+ M+ + PD T+ L +C L
Sbjct: 241 VFNVMLKRSVVSWNTMISGWFQNGRPEEALAVFNSMMDARVEPDSATIVSALPSCGHLKE 300
Query: 348 MERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTA 407
+E G +VH + + + ALVDMY++CG + A L + D+++ +M+
Sbjct: 301 LELGIKVHKLVQKNHLQEKIEVRNALVDMYSRCGGMDEASLVFAETKEKDVITWTSMING 360
Query: 408 YAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPS 467
Y M+G+ K +A + G P+ ++ S LSAC +K G + +
Sbjct: 361 YIMNGNAKSALALCPAMQLDGVVPNAVTLASLLSACASLCCLKQGKSLHAWVMRKKLDSD 420
Query: 468 LKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNL---EFGQIAAD 524
+ T ++D+ ++ + +++ K M +V W ALL G + H L G +
Sbjct: 421 VLVVTALIDMYAKCNAVSYSFQVFAKTSMK-RTVPWNALLSGLI-HNELAREAVGLFKSM 478
Query: 525 RLIELEPNN-TGN-----YVMLANLFAYAGRWSDLART 556
+ E+E N+ T N Y +LA+L S L R+
Sbjct: 479 LIEEVEANHATFNSVIPAYAILADLKQVMNLHSYLVRS 516
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 140/289 (48%), Gaps = 15/289 (5%)
Query: 236 SVLIACADMNSLRKGKEIHALAIALGL-QSDTFV--GGALVEMYCRYQDLVAAQMAFDEI 292
S+L A SL K K +H I GL S F+ L Y + A+ FD++
Sbjct: 84 SLLCHYAATRSLNKTKILHGHTITSGLLHSPNFIHLPSHLAVSYAFCGCVPLARKLFDDL 143
Query: 293 EN----IENLLGKMKED-GFEPNVYTWNAMQLFSEML-SLDLTPDIYTVGIILSACSSLA 346
+ + N + KM D GF ++A+++F M+ S PD YT +++ ACS ++
Sbjct: 144 SDPSLFLWNAIIKMYVDKGFH-----FDALRVFDSMICSGKCWPDKYTFPLVIKACSVMS 198
Query: 347 TMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLT 406
+ G +H A+ G+ S++ + +L+ MY CG + AR + + +VS N M++
Sbjct: 199 MLNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGKVGLARQVFNVMLKRSVVSWNTMIS 258
Query: 407 AYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKP 466
+ +G +E +A F ++ + PD + +SAL +C H ++ G + L+ ++
Sbjct: 259 GWFQNGRPEEALAVFNSMMDARVEPDSATIVSALPSCGHLKELELGIKVHKLVQKNHLQE 318
Query: 467 SLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
++ +VD+ SR G + EA + D + W +++ G + +GN
Sbjct: 319 KIEVRNALVDMYSRCGGMDEA-SLVFAETKEKDVITWTSMINGYIMNGN 366
>gi|125551253|gb|EAY96962.1| hypothetical protein OsI_18881 [Oryza sativa Indica Group]
Length = 822
Score = 317 bits (813), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 164/545 (30%), Positives = 291/545 (53%), Gaps = 43/545 (7%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
+V W+ +I + Q EEA+ + +G EP+ T+SS++ AC L + LG + H
Sbjct: 218 TVVVWTLLISRYVQGECAEEAVELFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLH 277
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
R G S+ V GLVD+Y + N+
Sbjct: 278 SLALRMGLASDACVSCGLVDMYAK--------------------------------SNIG 305
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
+A + +++ + +ISW ++ISGYV + + + ++ + I+P T+ S+
Sbjct: 306 QAMDYANKVFERMPKNDVISWTALISGYVQSGVQENKVMALFGEMLNESIKPNHITYSSI 365
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
L +CA ++ G+++HA I S VG ALV MY + A+ F++
Sbjct: 366 LKSCASISDHDSGRQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARRVFNQ------ 419
Query: 298 LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAY 357
+ E P + L ++ +D+ T ++SA +S+ + +G+Q+HA
Sbjct: 420 ----LYERSMIPCITEGRDFPLDHRIVRMDVGISSSTFASLISAAASVGMLTKGQQLHAM 475
Query: 358 AIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEG 417
+++ G+ SD + +LV MY++CG L+ A ++ + +++S +M++ A HG+ +
Sbjct: 476 SLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERA 535
Query: 418 IAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVD 476
++ F ++ +G +P+ +++++ LSAC H G ++ G E+F M + + P ++HY CMVD
Sbjct: 536 LSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYACMVD 595
Query: 477 LLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGN 536
LL+R+G + EA EFI ++P+ D+++W LLG C SH N+E G+I A ++ELEP +
Sbjct: 596 LLARSGIVKEALEFINEMPLKADALVWKTLLGACRSHDNIEVGEITAKNVVELEPRDPAP 655
Query: 537 YVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEI 596
YV+L+NL+A AG W ++AR R M+D ++K G SW+E + H+FRA D SH R+++I
Sbjct: 656 YVLLSNLYADAGLWDEVARIRSAMRDNNLNKETGLSWMEVENTTHEFRAGDTSHPRAQDI 715
Query: 597 YTIID 601
Y +D
Sbjct: 716 YGKLD 720
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 157/347 (45%), Gaps = 53/347 (15%)
Query: 42 ALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLF-RMQAEGLEPNARTLSSV 100
A + ERM D ++SW+A+I G+ Q+G E + LF M E ++PN T SS+
Sbjct: 311 ANKVFERMPKND-----VISWTALISGYVQSGVQENKVMALFGEMLNESIKPNHITYSSI 365
Query: 101 LPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNE 160
L +CA + G++ H ++ ++ S V N LV +Y G M A ++F++ ++
Sbjct: 366 LKSCASISDHDSGRQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARRVFNQLYERSM 425
Query: 161 VSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRD 220
+ C + E R+ ++H R
Sbjct: 426 IPC------------ITEGRDF--PLDH------------------------------RI 441
Query: 221 LLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQ 280
+ M GI +S TF S++ A A + L KG+++HA+++ G SD FV +LV MY R
Sbjct: 442 VRMDVGI--SSSTFASLISAAASVGMLTKGQQLHAMSLKAGFGSDRFVSNSLVSMYSRCG 499
Query: 281 DLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILS 340
L A +F+E+++ + G + Y A+ LF +M+ + P+ T +LS
Sbjct: 500 YLEDACRSFNELKDRNVISWTSMISGLAKHGYAERALSLFHDMILTGVKPNDVTYIAVLS 559
Query: 341 ACSSLATMERGKQVHAYAIR-CGYDSDVHIGTALVDMYAKCGSLKHA 386
ACS + + GK+ R G + +VD+ A+ G +K A
Sbjct: 560 ACSHVGLVREGKEYFRSMQRDHGLIPRMEHYACMVDLLARSGIVKEA 606
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 131/303 (43%), Gaps = 23/303 (7%)
Query: 247 LRKGKEIHA-LAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG-KMKE 304
LR G+ +H L L D V +L+ +Y R + +A+ FD + + +++
Sbjct: 64 LRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMA 123
Query: 305 DGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSS-----LATMERGKQVHAYAI 359
N ++ L EML L P+ YT+ AC L VH +
Sbjct: 124 SCLARNGAERGSLLLIGEMLESGLLPNAYTLCAAAHACFPHELYCLVGGVVLGLVHKMGL 183
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
+ +DV +G+AL+DM A+ G L AR + + +V +++ Y +E +
Sbjct: 184 ---WGTDVAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVE 240
Query: 420 HFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLS 479
F L GF PD + S +SAC GS++ G + L + +VD+ +
Sbjct: 241 LFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGLASDACVSCGLVDMYA 300
Query: 480 RAGELGEAYEFIKKI-PMAP--DSVMWGALLGGCVSHGNLE------FGQIAADRLIELE 530
++ +G+A ++ K+ P D + W AL+ G V G E FG++ + ++
Sbjct: 301 KS-NIGQAMDYANKVFERMPKNDVISWTALISGYVQSGVQENKVMALFGEMLNE---SIK 356
Query: 531 PNN 533
PN+
Sbjct: 357 PNH 359
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 123/290 (42%), Gaps = 63/290 (21%)
Query: 1 MYGKCG---SLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNET- 56
MY K ++D A KVF+ MP+ D +SW ++++ +G ++ + + + NE+
Sbjct: 298 MYAKSNIGQAMDYANKVFERMPKNDVISWTALISGYVQSG--VQENKVMALFGEMLNESI 355
Query: 57 -PNLVSWS-----------------------------------AVIGGFTQNGYDEEAIG 80
PN +++S A++ + ++G EEA
Sbjct: 356 KPNHITYSSILKSCASISDHDSGRQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARR 415
Query: 81 MLFRMQAEGLEP---------------------NARTLSSVLPACARLQKLSLGKEFHGY 119
+ ++ + P ++ T +S++ A A + L+ G++ H
Sbjct: 416 VFNQLYERSMIPCITEGRDFPLDHRIVRMDVGISSSTFASLISAAASVGMLTKGQQLHAM 475
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ GF S+ FV N LV +Y RCG + A + F++ +N +S ++I G ++G A
Sbjct: 476 SLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERA 535
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEP 229
LF M GV+ +++ +++S L E FR + G+ P
Sbjct: 536 LSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIP 585
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 91/214 (42%), Gaps = 37/214 (17%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +CG L+DA + F + +R N++
Sbjct: 494 MYSRCGYLEDACRSFNELKDR------------------------------------NVI 517
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+++I G ++GY E A+ + M G++PN T +VL AC+ + + GKE+ +
Sbjct: 518 SWTSMISGLAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSM 577
Query: 121 TRN-GFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
R+ G + +VD+ R G + AL+ ++ +K + ++G C + + E
Sbjct: 578 QRDHGLIPRMEHYACMVDLLARSGIVKEALEFINEMPLKADALVWKTLLGACRSHDNIEV 637
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDE 213
E+ + R + + + Y D L+DE
Sbjct: 638 GEITAKNVVELEPRDPAPYVLLSNLYADAGLWDE 671
>gi|359486457|ref|XP_002275344.2| PREDICTED: pentatricopeptide repeat-containing protein At2g40720
[Vitis vinifera]
Length = 836
Score = 317 bits (813), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 186/593 (31%), Positives = 310/593 (52%), Gaps = 52/593 (8%)
Query: 14 VFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNG 73
V KM + D S++T A +G V +A + +++ + E N A+I F NG
Sbjct: 270 VIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRN-----AMISAFIGNG 324
Query: 74 YDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVN 133
+A+G+ +M+A ++ T+SS+L C+ + G+ H + + SN + +
Sbjct: 325 RAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQS 384
Query: 134 GLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQR 193
L+ +Y +CG A +F +++K +R
Sbjct: 385 ALLTMYYKCGSTEDADSVF--YTMK---------------------------------ER 409
Query: 194 GIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEI 253
+++W SMI+G+ N + +A +FR + ++G++ S SV+ A + ++ G I
Sbjct: 410 DVVAWGSMIAGFCQNRRFKDALDLFR-AMEKEGVKADSDVMTSVISAGLGLENVELGHLI 468
Query: 254 HALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYT 313
H AI GL+SD FV +LV+MY ++ +A+M F + N +NL+ + Y+
Sbjct: 469 HGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMPN-KNLVAWNSM----ISCYS 523
Query: 314 WN-----AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVH 368
WN ++ L ++L D ++ +L A SS+A + +GK +HAY IR SD+
Sbjct: 524 WNGLPEMSINLLPQILQHGFYLDSVSITTVLVAVSSVAALLKGKTLHAYQIRLQIPSDLQ 583
Query: 369 IGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASG 428
+ AL+DMY KCG LK+A+L ++ + +LV+ N+M+ Y HG+ +E + F+ + S
Sbjct: 584 VENALIDMYVKCGCLKYAQLIFENMPRRNLVTWNSMIAGYGSHGNCEEAVRLFKEMKRSE 643
Query: 429 FRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEA 487
PD ++FL+ +++C H+G ++ G F LM Y V+P ++HY +VDLL RAG L +A
Sbjct: 644 TAPDEVTFLALITSCSHSGMVEEGLNLFQLMRIEYGVEPRMEHYASVVDLLGRAGRLDDA 703
Query: 488 YEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYA 547
Y FI+ +P+ D +W LL C +H N+E G++ AD L+++EP NYV L NL+
Sbjct: 704 YSFIRGMPIDADRSVWLCLLFACRAHRNMELGELVADNLLKMEPARGSNYVPLLNLYGEV 763
Query: 548 GRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTII 600
W A R MK R + KSPGCSWIE ++ + F + D S R EIY +
Sbjct: 764 EMWDRAANLRASMKGRGLKKSPGCSWIEVKNRVDVFFSGDSSSTRRIEIYKTL 816
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 133/570 (23%), Positives = 227/570 (39%), Gaps = 91/570 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPER-----DCVSWNSVVTACAANGLVLEALECLERMSSLD-- 53
MY KCG L A +VF M E D WN V+ G E L RM L
Sbjct: 99 MYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYGHFEEGLAQFCRMQELSWY 158
Query: 54 ---------------------------------------------NETPNLVSWSAVIGG 68
N+V+W+ +IGG
Sbjct: 159 MAGRQIHGYIIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGG 218
Query: 69 FTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSN 128
F +NG E+++ + + E + + + + AC+ + L G++ H + + F +
Sbjct: 219 FVENGMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDD 278
Query: 129 PFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEH 188
P+V L+ +Y + G + A K+F + K N +I + NG +A L+++
Sbjct: 279 PYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNK--- 335
Query: 189 LGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPT-SFTFGSVLIACADMNSL 247
M+ G P SFT S+L C+ + S
Sbjct: 336 ----------------------------------MKAGETPVDSFTISSLLSGCSVVGSY 361
Query: 248 RKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGF 307
G+ +HA I +QS+ + AL+ MY + A F ++ + + GF
Sbjct: 362 DFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGF 421
Query: 308 EPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDV 367
N +A+ LF M + D + ++SA L +E G +H +AI+ G +SDV
Sbjct: 422 CQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLESDV 481
Query: 368 HIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILAS 427
+ +LVDMY+K G + A + + + +LV+ N+M++ Y+ +G + I +IL
Sbjct: 482 FVACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQILQH 541
Query: 428 GFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEA 487
GF D +S + L A ++ G + L+ ++D+ + G L A
Sbjct: 542 GFYLDSVSITTVLVAVSSVAALLKGKTLHAYQIRLQIPSDLQVENALIDMYVKCGCLKYA 601
Query: 488 YEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
+ +P + V W +++ G SHGN E
Sbjct: 602 QLIFENMPRR-NLVTWNSMIAGYGSHGNCE 630
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 115/493 (23%), Positives = 218/493 (44%), Gaps = 62/493 (12%)
Query: 27 NSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQ 86
S++ GL+ AL+ ++MS + P++ W+ VI G+ + G+ EE +
Sbjct: 94 TSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYGHFEEGLAQF---- 149
Query: 87 AEGLEPNARTLSSVLPACARLQKLSL---GKEFHGYITRNGFMSNPFVVNGLVDVYRRCG 143
R+Q+LS G++ HGYI RN F +P++ L+ +Y C
Sbjct: 150 ------------------CRMQELSWYMAGRQIHGYIIRNMFEGDPYLETALIGMYSSCS 191
Query: 144 DMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMIS 203
+ A +F K EN + I++WN MI
Sbjct: 192 RPMEAWSLFGKL----------------EN------------------RSNIVAWNVMIG 217
Query: 204 GYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQ 263
G+V+N +++++ ++ L + + S +F AC+ L G+++H I + Q
Sbjct: 218 GFVENGMWEKSLELY-SLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQ 276
Query: 264 SDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEM 323
D +V +L+ MY + + A+ FD++ + E L F N ++A+ L+++M
Sbjct: 277 DDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKM 336
Query: 324 LSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSL 383
+ + D +T+ +LS CS + + + G+ VHA I+ S+V I +AL+ MY KCGS
Sbjct: 337 KAGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGST 396
Query: 384 KHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSAC 443
+ A + + D+V+ +M+ + + K+ + FR + G + D S +SA
Sbjct: 397 EDADSVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAG 456
Query: 444 VHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMW 503
+ +++ G ++ + +VD+ S+ G E+ E + + V W
Sbjct: 457 LGLENVELGHLIHGFAIKRGLESDVFVACSLVDMYSKFG-FAESAEMVFSSMPNKNLVAW 515
Query: 504 GALLGGCVSHGNL 516
+++ C S L
Sbjct: 516 NSMI-SCYSWNGL 527
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 111/238 (46%), Gaps = 36/238 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G + A+ VF MP ++ V+WNS+++
Sbjct: 490 MYSKFGFAESAEMVFSSMPNKNLVAWNSMISC---------------------------- 521
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
++ NG E +I +L ++ G ++ ++++VL A + + L GK H Y
Sbjct: 522 --------YSWNGLPEMSINLLPQILQHGFYLDSVSITTVLVAVSSVAALLKGKTLHAYQ 573
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R S+ V N L+D+Y +CG + A IF +N V+ N++I GY +GN EA
Sbjct: 574 IRLQIPSDLQVENALIDMYVKCGCLKYAQLIFENMPRRNLVTWNSMIAGYGSHGNCEEAV 633
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
LF +M+ +++ ++I+ + + +E ++F+ + + G+EP + SV+
Sbjct: 634 RLFKEMKRSETAPDEVTFLALITSCSHSGMVEEGLNLFQLMRIEYGVEPRMEHYASVV 691
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 94/410 (22%), Positives = 159/410 (38%), Gaps = 65/410 (15%)
Query: 197 SWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHAL 256
S NS I V Y +A + + FTF S+L CA +++L G+ IHA
Sbjct: 22 SINSKIKALVQQGKYSQALELHSKT-PHSALTTAKFTFPSLLKTCASLSNLYHGRTIHAS 80
Query: 257 AIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKED-GFEPNVYTWN 315
+ +GLQSD ++ +L+ MY + L +A FD KM E P++ WN
Sbjct: 81 IVTMGLQSDPYIATSLINMYVKCGLLGSALQVFD----------KMSESRDSAPDITVWN 130
Query: 316 AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMER------GKQVHAYAIRCGYDSDVHI 369
+ + G + M+ G+Q+H Y IR ++ D ++
Sbjct: 131 P-----------VIDGYFKYGHFEEGLAQFCRMQELSWYMAGRQIHGYIIRNMFEGDPYL 179
Query: 370 GTALVDMYAKCGSLKHARLAYKRIST-PDLVSQNAMLTAYAMHGHGKEGIAHFRRILASG 428
TAL+ MY+ C A + ++ ++V+ N M+ + +G ++ + +
Sbjct: 180 ETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKSLELYSLAKNEN 239
Query: 429 FRPDHISFLSALSACVHAGSIKTGSE---------FFD-------LMAYYDVKPSLKHYT 472
+ SF A +AC H + G + F D L+ Y S++
Sbjct: 240 CKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAK 299
Query: 473 CMVD-LLSRAGEL-----------GEAYEFI------KKIPMAPDSVMWGALLGGCVSHG 514
+ D +L + EL G AY+ + K DS +LL GC G
Sbjct: 300 KVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVG 359
Query: 515 NLEFGQIAADRLIELE-PNNTGNYVMLANLFAYAGRWSDLARTRQKMKDR 563
+ +FG+ +I+ +N L ++ G D MK+R
Sbjct: 360 SYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKER 409
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 60/111 (54%), Gaps = 2/111 (1%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG L A+ +F+ MP R+ V+WNS++ ++G EA+ + M + P+ V
Sbjct: 591 MYVKCGCLKYAQLIFENMPRRNLVTWNSMIAGYGSHGNCEEAVRLFKEMKRSET-APDEV 649
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKL 110
++ A+I + +G EE + + M+ E G+EP +SV+ R +L
Sbjct: 650 TFLALITSCSHSGMVEEGLNLFQLMRIEYGVEPRMEHYASVVDLLGRAGRL 700
>gi|147767158|emb|CAN71514.1| hypothetical protein VITISV_021786 [Vitis vinifera]
Length = 690
Score = 317 bits (813), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 199/630 (31%), Positives = 303/630 (48%), Gaps = 102/630 (16%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNL-- 59
Y K L ++VF + D SW ++++AC G + A L N+TP +
Sbjct: 104 YAKSKDLVSVQRVFNEIENPDVYSWTTLLSACTKLGQIGYACH-------LFNQTPRMIP 156
Query: 60 VSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
V W+A+I G +N + E A+ + M G+ + T +SVL C+ L+ L G+E H
Sbjct: 157 VVWNAIITGCAENKHTEIALNLFREMHQLGVRHDKYTFASVLSLCS-LELLDFGREVHTL 215
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ + GF+ V+N L+ +Y +G VA+A
Sbjct: 216 VIKTGFLVRASVINALLTMY-------------------------------FNSGKVADA 244
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
E+F++ E I++N MI G +EA MF+++ + PT TF SV+
Sbjct: 245 YEVFEEAE--STVHDDITFNVMIGGLASVGRDEEALIMFKEM-QEACLRPTELTFVSVMS 301
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL- 298
+C+ S R ++HA AI +G ++ T V A + MY +L A M FD + N L
Sbjct: 302 SCS---SARVSHQVHAQAIKMGFEACTPVSNAAMTMYSSCGNLHAVHMVFDRLGNFYRLA 358
Query: 299 ---LGKMKEDGFEPNVYT------------------------------------------ 313
+M+ G EP+ +T
Sbjct: 359 ILAFLQMQRAGIEPDEFTIGSLLASSESLEIVKMFQALVSKNGLNSKIEVSNALVSAFSK 418
Query: 314 -------WNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSD 366
+ ++ F E+L L P+ YT+ I+LS C+S++ + GKQ+H Y +R G S
Sbjct: 419 HGQIEQAYQGLEQFYELLMSTLKPNAYTLSIVLSICASISALRHGKQIHGYILRSGVFSV 478
Query: 367 VHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILA 426
+G AL+ MYAKCG L + + ++ D+VS NAM++AYA HG GKE + F+ +
Sbjct: 479 TSLGNALITMYAKCGDLDWSLRIFNVMNGRDIVSWNAMISAYAQHGKGKEAVHFFKAMQD 538
Query: 427 SG-FRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGEL 484
SG +PD +F + LSAC HAG + G+ F+ M Y +P H +C+VDLL RAG L
Sbjct: 539 SGGVKPDQATFTAVLSACSHAGLVDDGTRIFNSMVNDYGFEPGADHLSCIVDLLGRAGYL 598
Query: 485 GEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLF 544
EA I + S +W L C +HGNL G+I A L+E+E N+ YV+L+N++
Sbjct: 599 EEAERLINSKHLKIVSSIWWTLFSACAAHGNLRLGRIVAGFLLEIEQNDPAVYVLLSNIY 658
Query: 545 AYAGRWSDLARTRQKMKDRRMHKSPGCSWI 574
A AG+W + A TR M+ R+ K PGCSWI
Sbjct: 659 AAAGQWEEAANTRDLMQKTRVAKQPGCSWI 688
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 122/534 (22%), Positives = 230/534 (43%), Gaps = 78/534 (14%)
Query: 43 LECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEG-LEPNARTLSSVL 101
+E + + + N L+ + ++ T++ ++ ++ + ++ + L+P+ TLSS L
Sbjct: 7 MEYINIVKTTKNAAEQLIKINQLLAELTRSHHNSASVQLFVQIHSSNYLKPDHFTLSSTL 66
Query: 102 PACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEV 161
ACA L+ + G + H Y + G + V N L+ Y + D++S ++F++ +
Sbjct: 67 TACANLRYAASGNQLHAYSIQTGLKAYTHVGNTLLSFYAKSKDLVSVQRVFNEIENPDVY 126
Query: 162 SCNTIIVGYCENGNVAEARELFDQMEHLGVQRGI-ISWNSMISGYVDNSLYDEAFSMFRD 220
S T++ + G + A LF+Q R I + WN++I+G +N + A ++FR+
Sbjct: 127 SWTTLLSACTKLGQIGYACHLFNQ-----TPRMIPVVWNAIITGCAENKHTEIALNLFRE 181
Query: 221 LLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQ 280
+ + G+ +TF SVL C+ + L G+E+H L I G V AL+ MY
Sbjct: 182 -MHQLGVRHDKYTFASVLSLCS-LELLDFGREVHTLVIKTGFLVRASVINALLTMYFNSG 239
Query: 281 DLVAAQMAFDEIENIEN-------LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIY 333
+ A F+E E+ + ++G + G + A+ +F EM L P
Sbjct: 240 KVADAYEVFEEAESTVHDDITFNVMIGGLASVGRDE-----EALIMFKEMQEACLRPTEL 294
Query: 334 TVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRI 393
T ++S+CSS QVHA AI+ G+++ + A + MY+ CG+L + + R+
Sbjct: 295 TFVSVMSSCSS---ARVSHQVHAQAIKMGFEACTPVSNAAMTMYSSCGNLHAVHMVFDRL 351
Query: 394 ST------------------PD----------------------LVSQ----------NA 403
PD LVS+ NA
Sbjct: 352 GNFYRLAILAFLQMQRAGIEPDEFTIGSLLASSESLEIVKMFQALVSKNGLNSKIEVSNA 411
Query: 404 MLTAYAMHG---HGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA 460
+++A++ HG +G+ F +L S +P+ + LS C +++ G + +
Sbjct: 412 LVSAFSKHGQIEQAYQGLEQFYELLMSTLKPNAYTLSIVLSICASISALRHGKQIHGYIL 471
Query: 461 YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
V ++ + ++ G+L + I + D V W A++ HG
Sbjct: 472 RSGVFSVTSLGNALITMYAKCGDLDWSLR-IFNVMNGRDIVSWNAMISAYAQHG 524
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 121/286 (42%), Gaps = 60/286 (20%)
Query: 276 YCRYQDLV-AAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLD-LTPDIY 333
Y Y ++V + A +++ I LL ++ + ++QLF ++ S + L PD +
Sbjct: 6 YMEYINIVKTTKNAAEQLIKINQLLAELTRSH-----HNSASVQLFVQIHSSNYLKPDHF 60
Query: 334 TVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRI 393
T+ L+AC++L G Q+HAY+I+ G + H+G L+ YAK L + + I
Sbjct: 61 TLSSTLTACANLRYAASGNQLHAYSIQTGLKAYTHVGNTLLSFYAKSKDLVSVQRVFNEI 120
Query: 394 STPDLVSQNAMLTA--------YAMH-----------------------GHGKEGIAHFR 422
PD+ S +L+A YA H H + + FR
Sbjct: 121 ENPDVYSWTTLLSACTKLGQIGYACHLFNQTPRMIPVVWNAIITGCAENKHTEIALNLFR 180
Query: 423 RILASGFRPDHISFLSALSAC----------VHAGSIKTGSEFFDLMAYYDVKPSLKHYT 472
+ G R D +F S LS C VH IKTG + V+ S+
Sbjct: 181 EMHQLGVRHDKYTFASVLSLCSLELLDFGREVHTLVIKTG---------FLVRASV--IN 229
Query: 473 CMVDLLSRAGELGEAYE-FIKKIPMAPDSVMWGALLGGCVSHGNLE 517
++ + +G++ +AYE F + D + + ++GG S G E
Sbjct: 230 ALLTMYFNSGKVADAYEVFEEAESTVHDDITFNVMIGGLASVGRDE 275
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 56/107 (52%), Gaps = 1/107 (0%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG LD + ++F +M RD VSWN++++A A +G EA+ + M P+
Sbjct: 488 MYAKCGDLDWSLRIFNVMNGRDIVSWNAMISAYAQHGKGKEAVHFFKAMQDSGGVKPDQA 547
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACAR 106
+++AV+ + G ++ + M + G EP A LS ++ R
Sbjct: 548 TFTAVLSACSHAGLVDDGTRIFNSMVNDYGFEPGADHLSCIVDLLGR 594
>gi|356557279|ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 631
Score = 317 bits (813), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 169/501 (33%), Positives = 281/501 (56%), Gaps = 38/501 (7%)
Query: 98 SSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSI 157
+S+L +C + L GK+ H + + G N + LV+ Y C + +A +F K
Sbjct: 62 ASLLESCISAKALEPGKQLHARLCQLGIAYNLDLATKLVNFYSVCNSLRNAHHLFDKIPK 121
Query: 158 KNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSM 217
N + WN +I Y N ++ A S+
Sbjct: 122 GN-----------------------------------LFLWNVLIRAYAWNGPHETAISL 146
Query: 218 FRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYC 277
+ +L G++P +FT VL AC+ ++++ +G+ IH I G + D FVG ALV+MY
Sbjct: 147 YHQML-EYGLKPDNFTLPFVLKACSALSTIGEGRVIHERVIRSGWERDVFVGAALVDMYA 205
Query: 278 RYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGI 337
+ +V A+ FD+I + + +L + N + ++ L EM + + P T+
Sbjct: 206 KCGCVVDARHVFDKIVDRDAVLWNSMLAAYAQNGHPDESLSLCCEMAAKGVRPTEATLVT 265
Query: 338 ILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPD 397
++S+ + +A + G+++H + R G+ + + TAL+DMYAKCGS+K A + ++R+
Sbjct: 266 VISSSADIACLPHGREIHGFGWRHGFQYNDKVKTALIDMYAKCGSVKVACVLFERLREKR 325
Query: 398 LVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFD 457
+VS NA++T YAMHG E + F R++ +PDHI+F+ AL+AC + G ++
Sbjct: 326 VVSWNAIITGYAMHGLAVEALDLFERMMKEA-QPDHITFVGALAACSRGRLLDEGRALYN 384
Query: 458 LMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNL 516
LM + P+++HYTCMVDLL G+L EAY+ I+++ + PDS +WGALL C +HGN+
Sbjct: 385 LMVRDCRINPTVEHYTCMVDLLGHCGQLDEAYDLIRQMDVMPDSGVWGALLNSCKTHGNV 444
Query: 517 EFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIED 576
E ++A ++LIELEP+++GNYV+LAN++A +G+W +AR RQ M D+ + K+ CSWIE
Sbjct: 445 ELAEVALEKLIELEPDDSGNYVILANMYAQSGKWEGVARLRQLMIDKGIKKNIACSWIEV 504
Query: 577 RDEIHKFRASDRSHDRSEEIY 597
+++++ F + D SH S IY
Sbjct: 505 KNKVYAFLSGDVSHPNSGAIY 525
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/292 (30%), Positives = 143/292 (48%), Gaps = 19/292 (6%)
Query: 232 FTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDE 291
+ + S+L +C +L GK++HA LG+ + + LV Y L A FD+
Sbjct: 59 YYYASLLESCISAKALEPGKQLHARLCQLGIAYNLDLATKLVNFYSVCNSLRNAHHLFDK 118
Query: 292 IENIENLLGKMKEDGFEPNV----YTWN-----AMQLFSEMLSLDLTPDIYTVGIILSAC 342
I K + F NV Y WN A+ L+ +ML L PD +T+ +L AC
Sbjct: 119 IP---------KGNLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKAC 169
Query: 343 SSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQN 402
S+L+T+ G+ +H IR G++ DV +G ALVDMYAKCG + AR + +I D V N
Sbjct: 170 SALSTIGEGRVIHERVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKIVDRDAVLWN 229
Query: 403 AMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYY 462
+ML AYA +GH E ++ + A G RP + ++ +S+ + G E +
Sbjct: 230 SMLAAYAQNGHPDESLSLCCEMAAKGVRPTEATLVTVISSSADIACLPHGREIHGFGWRH 289
Query: 463 DVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
+ + K T ++D+ ++ G + A +++ V W A++ G HG
Sbjct: 290 GFQYNDKVKTALIDMYAKCGSVKVACVLFERL-REKRVVSWNAIITGYAMHG 340
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 160/358 (44%), Gaps = 39/358 (10%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
NL W+ +I + NG E AI + +M GL+P+ TL VL AC+ L + G+ H
Sbjct: 123 NLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALSTIGEGRVIH 182
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
+ R+G+ + FV LVD+Y +CG ++ A +F K ++ V N+++ Y +NG+
Sbjct: 183 ERVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKIVDRDAVLWNSMLAAYAQNGHP- 241
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
DE+ S+ ++ + G+ PT T +V
Sbjct: 242 ----------------------------------DESLSLCCEMAAK-GVRPTEATLVTV 266
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
+ + AD+ L G+EIH G Q + V AL++MY + + A + F+ +
Sbjct: 267 ISSSADIACLPHGREIHGFGWRHGFQYNDKVKTALIDMYAKCGSVKVACVLFERLREKRV 326
Query: 298 LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAY 357
+ G+ + A+ LF M+ + PD T L+ACS ++ G+ ++
Sbjct: 327 VSWNAIITGYAMHGLAVEALDLFERMMK-EAQPDHITFVGALAACSRGRLLDEGRALYNL 385
Query: 358 AIR-CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST-PDLVSQNAMLTAYAMHGH 413
+R C + V T +VD+ CG L A +++ PD A+L + HG+
Sbjct: 386 MVRDCRINPTVEHYTCMVDLLGHCGQLDEAYDLIRQMDVMPDSGVWGALLNSCKTHGN 443
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 138/297 (46%), Gaps = 42/297 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG + DA+ VF + +RD V WNS+
Sbjct: 203 MYAKCGCVVDARHVFDKIVDRDAVLWNSM------------------------------- 231
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+ + QNG+ +E++ + M A+G+ P TL +V+ + A + L G+E HG+
Sbjct: 232 -----LAAYAQNGHPDESLSLCCEMAAKGVRPTEATLVTVISSSADIACLPHGREIHGFG 286
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R+GF N V L+D+Y +CG + A +F + K VS N II GY +G EA
Sbjct: 287 WRHGFQYNDKVKTALIDMYAKCGSVKVACVLFERLREKRVVSWNAIITGYAMHGLAVEAL 346
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRD-GIEPTSFTFGSVLI 239
+LF++M Q I++ ++ L DE +++ +L++RD I PT + ++
Sbjct: 347 DLFERMMK-EAQPDHITFVGALAACSRGRLLDEGRALY-NLMVRDCRINPTVEHYTCMVD 404
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
L E + L + + D+ V GAL+ + ++ A++A +++ +E
Sbjct: 405 LLGHCGQL---DEAYDLIRQMDVMPDSGVWGALLNSCKTHGNVELAEVALEKLIELE 458
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 107/241 (44%), Gaps = 13/241 (5%)
Query: 287 MAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTP------------DIYT 334
M+F I + + F N++ + + + L P + Y
Sbjct: 1 MSFSSIRKTQETSRILSILSFSLNLFPVSPYYFLHQSFATQLIPQHKVDSFPSSPSNHYY 60
Query: 335 VGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS 394
+L +C S +E GKQ+HA + G ++ + T LV+ Y+ C SL++A + +I
Sbjct: 61 YASLLESCISAKALEPGKQLHARLCQLGIAYNLDLATKLVNFYSVCNSLRNAHHLFDKIP 120
Query: 395 TPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSE 454
+L N ++ AYA +G + I+ + ++L G +PD+ + L AC +I G
Sbjct: 121 KGNLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALSTIGEGRV 180
Query: 455 FFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
+ + + + +VD+ ++ G + +A KI + D+V+W ++L +G
Sbjct: 181 IHERVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKI-VDRDAVLWNSMLAAYAQNG 239
Query: 515 N 515
+
Sbjct: 240 H 240
>gi|296088765|emb|CBI38215.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 317 bits (813), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 192/610 (31%), Positives = 313/610 (51%), Gaps = 93/610 (15%)
Query: 5 CGSLDDAKKV----FKMMPERDC-VSWNSVVTACAANGLVLEALECLERMSSLDNETPNL 59
C S+ K++ K MP D ++ ++ ++A A L ++ L ++ L TPNL
Sbjct: 47 CKSIKGLKQIHASIIKTMPSPDAQLTISTRLSALCAQSLPIDPRYALSLLAQL--RTPNL 104
Query: 60 VSWSAVIGGF-TQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHG 118
++A+I G T N E + + +M ++G+ P+ T+ VL ACA + + G+E HG
Sbjct: 105 PLYNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKACAESRAVREGEEVHG 164
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
+ G S+ +V N L+ +Y C + SA K+F
Sbjct: 165 QAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDT------------------------ 200
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
QR ++SW +MI GYV E ++ +
Sbjct: 201 -----------SPQRDLVSWTTMIQGYVKMGFAREGVGLY-------------------I 230
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDE--IENI- 295
I +++N D FVG ALV+MY + D A+ F E ++N+
Sbjct: 231 IRNSNVNL------------------DVFVGNALVDMYLKCGDANFARKVFQEMPVKNVV 272
Query: 296 --ENLLGKMKEDG-FEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGK 352
+++ + + G F+ ++Y +F +M L + PD T+ +L++C++L +E GK
Sbjct: 273 SWNSMISGLAQKGQFKESLY------MFRKMQRLGVKPDDVTLVAVLNSCANLGVLELGK 326
Query: 353 QVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHG 412
VHAY R +D IG ALVDMYAKCGS+ A ++ ++ D+ S AM+ AMHG
Sbjct: 327 WVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQACWVFQAMNRKDVYSYTAMIVGLAMHG 386
Query: 413 HGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFF-DLMAYYDVKPSLKHY 471
G + + F + G PD ++F+ L+AC H G ++ G ++F D+ Y+++P L+HY
Sbjct: 387 QGGKALDLFSEMPKMGIEPDEVTFVGVLTACSHVGLVEEGRKYFEDMSTIYNLRPQLEHY 446
Query: 472 TCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEP 531
CMVDLL RAG + EA EFI+ +P+ PD+ + GALLG C HG +E G+ ++ ++EP
Sbjct: 447 GCMVDLLGRAGLINEAEEFIRNMPIEPDAFVLGALLGACKIHGKVELGESVMKKIEKIEP 506
Query: 532 NNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHD 591
G YV+++N+++ A RW D + R+ MK+R + K+PGCS IE IH+F+ D+SH
Sbjct: 507 RKDGAYVLMSNIYSSANRWRDALKLRKTMKERNLEKTPGCSSIELDGVIHEFQKGDKSHP 566
Query: 592 RSEEIYTIID 601
+ +EIY ++D
Sbjct: 567 KIKEIYKLLD 576
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 148/325 (45%), Gaps = 32/325 (9%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVT-------------------------ACAA 35
MY C + A+KVF P+RD VSW +++
Sbjct: 184 MYAVCDVIRSARKVFDTSPQRDLVSWTTMIQGYVKMGFAREGVGLYIIRNSNVNLDVFVG 243
Query: 36 NGLVLEALEC----LERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLE 91
N LV L+C R + N+VSW+++I G Q G +E++ M +MQ G++
Sbjct: 244 NALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVK 303
Query: 92 PNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKI 151
P+ TL +VL +CA L L LGK H Y+ RN ++ F+ N LVD+Y +CG + A +
Sbjct: 304 PDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQACWV 363
Query: 152 FSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLY 211
F + K+ S +IVG +G +A +LF +M +G++ +++ +++ L
Sbjct: 364 FQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTACSHVGLV 423
Query: 212 DEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGA 271
+E F D+ + P +G ++ + + +E + ++ D FV GA
Sbjct: 424 EEGRKYFEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAEE---FIRNMPIEPDAFVLGA 480
Query: 272 LVEMYCRYQDLVAAQMAFDEIENIE 296
L+ + + + +IE IE
Sbjct: 481 LLGACKIHGKVELGESVMKKIEKIE 505
>gi|255562697|ref|XP_002522354.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538432|gb|EEF40038.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 704
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 196/669 (29%), Positives = 321/669 (47%), Gaps = 116/669 (17%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY CGS DA+K+F MP ++ +S+N
Sbjct: 52 MYAHCGSRSDAQKLFDRMPRKNAISYN--------------------------------- 78
Query: 61 SWSAVIGGFTQNG-YDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
A+I + ++ Y+ + + M + L PN T +S+L C L+ LG HG
Sbjct: 79 ---ALIAAYCRDSSYETLSFKLFSDMGIQRLRPNGATFTSLLQVCCLLEDWFLGSTLHGQ 135
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTII------------ 167
+ + G++++ V L+ +Y CGD+ SA K+F K++V N++I
Sbjct: 136 VLQFGYVNDICVQTMLLGMYSDCGDLESACKVFGYAVEKDDVFWNSMISGYLKNDRIKES 195
Query: 168 ----------------------------VGYCENGNVAEAR--------------ELFDQ 185
+GY G + A+ L D
Sbjct: 196 LSLFGEMVRSGTIFTQFTCSMALNACSKLGYYSQGRIIHAQVIVSNILPDSALQNALLDM 255
Query: 186 MEHLGVQR------------GIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFT 233
G +R +ISWNSMIS + N ++A +F LL +P +T
Sbjct: 256 YYSCGDRRTALTLFSRIQIPSLISWNSMISWFAKNEEGEKAMGLFVKLLGMSTCKPDEYT 315
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
F +++ A + + G+ +HA I GLQ F+G AL+ MY R D+ AA+ F +E
Sbjct: 316 FTAIISATGEFRATDYGQPLHAQVIKAGLQWSVFIGNALLSMYFRNSDVEAARGVFSLME 375
Query: 294 N------IENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLAT 347
E ++G + E +A++LF +M D + + LS C+ LA
Sbjct: 376 EKDVVLWTEMIMGHCRLGDGE------SAIKLFCKMRQEGHKSDSFALSGALSVCADLAI 429
Query: 348 MERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTA 407
+++G+ +H A++ G ++++ + +LVDMYAK G+L+ A+L + ++ PDL N+M+
Sbjct: 430 LKQGQMLHTQAVKTGCEAEISVCGSLVDMYAKNGNLQAAQLIFSQVCNPDLKCWNSMIGG 489
Query: 408 YAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPS 467
Y+ HG +E + F +L G PD ++FLS LSAC H+G ++ G +D M + P
Sbjct: 490 YSHHGMAEEAVMLFAEVLECGLTPDQVTFLSLLSACNHSGLVEKGKFLWDYMKKNGITPG 549
Query: 468 LKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSV-MWGALLGGCVSHGNLEFGQIAADRL 526
KHY+CMV LLSRAG L EA E I + + + + +W LL CV+ NL G AA ++
Sbjct: 550 PKHYSCMVSLLSRAGLLDEAEELITESTCSEEHLKLWRTLLSSCVNRRNLTVGARAAKQV 609
Query: 527 IELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRAS 586
+ L+P ++ Y++L+NL+A GRW +A R+K++ + K PG SWIE +++IH F +
Sbjct: 610 LRLDPEDSATYILLSNLYAVTGRWDGVAELRKKIRGLMLEKDPGVSWIEAKNDIHVFSSD 669
Query: 587 DRSHDRSEE 595
D+S+ +E
Sbjct: 670 DQSNPVIDE 678
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/376 (24%), Positives = 164/376 (43%), Gaps = 53/376 (14%)
Query: 97 LSSVLPACARLQKLSLGKEFHGYI----TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIF 152
L +++ C + L ++ H I + +P++ N L+ +Y CG
Sbjct: 7 LEALIKKCTTINSLKKARQLHALILATTASTSYAQSPYLNNNLIAMYAHCGSR------- 59
Query: 153 SKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYD 212
++A++LFD+M ++ IS+N++I+ Y +S Y+
Sbjct: 60 ------------------------SDAQKLFDRMP----RKNAISYNALIAAYCRDSSYE 91
Query: 213 E-AFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGA 271
+F +F D+ ++ + P TF S+L C + G +H + G +D V
Sbjct: 92 TLSFKLFSDMGIQR-LRPNGATFTSLLQVCCLLEDWFLGSTLHGQVLQFGYVNDICVQTM 150
Query: 272 LVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPD 331
L+ MY DL +A F +++ G+ N ++ LF EM+
Sbjct: 151 LLGMYSDCGDLESACKVFGYAVEKDDVFWNSMISGYLKNDRIKESLSLFGEMVRSGTIFT 210
Query: 332 IYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYK 391
+T + L+ACS L +G+ +HA I D + AL+DMY CG + A +
Sbjct: 211 QFTCSMALNACSKLGYYSQGRIIHAQVIVSNILPDSALQNALLDMYYSCGDRRTALTLFS 270
Query: 392 RISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILA-SGFRPDHISFLSALSAC------- 443
RI P L+S N+M++ +A + G++ + F ++L S +PD +F + +SA
Sbjct: 271 RIQIPSLISWNSMISWFAKNEEGEKAMGLFVKLLGMSTCKPDEYTFTAIISATGEFRATD 330
Query: 444 ----VHAGSIKTGSEF 455
+HA IK G ++
Sbjct: 331 YGQPLHAQVIKAGLQW 346
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 120/281 (42%), Gaps = 14/281 (4%)
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSD----TFVGGALVEMYCRYQDLVAAQMAFDE 291
+++ C +NSL+K +++HAL +A + ++ L+ MY AQ FD
Sbjct: 9 ALIKKCTTINSLKKARQLHALILATTASTSYAQSPYLNNNLIAMYAHCGSRSDAQKLFDR 68
Query: 292 IE-----NIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLA 346
+ + L+ D + Y + +LFS+M L P+ T +L C L
Sbjct: 69 MPRKNAISYNALIAAYCRD----SSYETLSFKLFSDMGIQRLRPNGATFTSLLQVCCLLE 124
Query: 347 TMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLT 406
G +H ++ GY +D+ + T L+ MY+ CG L+ A + D V N+M++
Sbjct: 125 DWFLGSTLHGQVLQFGYVNDICVQTMLLGMYSDCGDLESACKVFGYAVEKDDVFWNSMIS 184
Query: 407 AYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKP 466
Y + KE ++ F ++ SG + AL+AC G G + ++ P
Sbjct: 185 GYLKNDRIKESLSLFGEMVRSGTIFTQFTCSMALNACSKLGYYSQGRIIHAQVIVSNILP 244
Query: 467 SLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALL 507
++D+ G+ A +I + P + W +++
Sbjct: 245 DSALQNALLDMYYSCGDRRTALTLFSRIQI-PSLISWNSMI 284
>gi|115471325|ref|NP_001059261.1| Os07g0239600 [Oryza sativa Japonica Group]
gi|33146689|dbj|BAC80084.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50510012|dbj|BAD30625.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610797|dbj|BAF21175.1| Os07g0239600 [Oryza sativa Japonica Group]
Length = 720
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 174/555 (31%), Positives = 297/555 (53%), Gaps = 12/555 (2%)
Query: 54 NETPNLVS--WSAVIGGFTQNGYDEEAIGMLFRMQAEG-LEPNARTLSSVLPACARLQKL 110
+E P + W+ I G + G + + M AEG PNA L++V+ CA + +
Sbjct: 69 DERPTRTAPVWTLTISGCARRGRYADGMRAFAEMLAEGEATPNAFVLAAVVRCCAGMGDV 128
Query: 111 SLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGY 170
GK HG++ RNG + + N ++D+Y +CG A ++F + ++ VS N I
Sbjct: 129 ESGKRVHGWMLRNGVHLDVVLCNAVLDMYAKCGQFERARRVFGAMAERDAVSWNIAIGAC 188
Query: 171 CENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPT 230
++G++ + +LFD+ R SWN++ISG + + +A S R + + G+
Sbjct: 189 IQSGDILGSMQLFDE----SPLRDTTSWNTIISGLMRSGHAADALSHLRRM-AQAGVVFN 243
Query: 231 SFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFD 290
+T+ + + + G+++H + L+ D FV +L++MYC+ L AA FD
Sbjct: 244 HYTYSTAFVLAGMLLLPDLGRQLHGRVLIAALEGDAFVRSSLMDMYCKCGLLEAAASVFD 303
Query: 291 EIENIE---NLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLAT 347
+ N G+ N A+ LF ML + D +T+ + +AC+++
Sbjct: 304 HWSPLTRDMNFAWSTMVAGYVQNGREEEALDLFRRMLREGVAADRFTLTSVAAACANVGM 363
Query: 348 MERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTA 407
+E+G+QVH + Y D + +A+VDMYAKCG+L+ AR + R T ++ +ML +
Sbjct: 364 VEQGRQVHGCVEKLWYKLDAPLASAIVDMYAKCGNLEDARSIFDRACTKNIAVWTSMLCS 423
Query: 408 YAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKP 466
YA HG G+ I F R+ A P+ I+ + LSAC H G + G +F M Y + P
Sbjct: 424 YASHGQGRIAIELFERMTAEKMTPNEITLVGVLSACSHVGLVSEGELYFKQMQEEYGIVP 483
Query: 467 SLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRL 526
S++HY C+VDL R+G L +A FI++ + ++++W LL C H + E+ ++A+++L
Sbjct: 484 SIEHYNCIVDLYGRSGLLDKAKNFIEENNINHEAIVWKTLLSACRLHQHNEYAKLASEKL 543
Query: 527 IELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRAS 586
++LE + G+YVML+N++A +W D R M++R++ K PG SWI ++ +H F A
Sbjct: 544 VQLEQCDAGSYVMLSNIYATNNKWHDTFELRVSMQERKVRKQPGRSWIHLKNTVHTFVAG 603
Query: 587 DRSHDRSEEIYTIID 601
D SH +S EIY ++
Sbjct: 604 DASHPQSAEIYAYLE 618
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 112/440 (25%), Positives = 193/440 (43%), Gaps = 86/440 (19%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETP--N 58
MY KCG + A++VF M ERD VSWN + AC +G +L +++ L +E+P +
Sbjct: 156 MYAKCGQFERARRVFGAMAERDAVSWNIAIGACIQSGDILGSMQ-------LFDESPLRD 208
Query: 59 LVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHG 118
SW+ +I G ++G+ +A+ L RM G+ N T S+ L LG++ HG
Sbjct: 209 TTSWNTIISGLMRSGHAADALSHLRRMAQAGVVFNHYTYSTAFVLAGMLLLPDLGRQLHG 268
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNE---VSCNTIIVGYCENGN 175
+ + FV + L+D+Y +CG + +A +F +S + +T++ GY +NG
Sbjct: 269 RVLIAALEGDAFVRSSLMDMYCKCGLLEAAASVFDHWSPLTRDMNFAWSTMVAGYVQNGR 328
Query: 176 VAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFG 235
EA +LF +M +R+G+ FT
Sbjct: 329 EEEALDLFRRM------------------------------------LREGVAADRFTLT 352
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
SV ACA++ + +G+++H L + D + A+V+MY + +L A+ FD
Sbjct: 353 SVAAACANVGMVEQGRQVHGCVEKLWYKLDAPLASAIVDMYAKCGNLEDARSIFDR---- 408
Query: 296 ENLLGKMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSA 341
N+ W +M +LF M + +TP+ T+ +LSA
Sbjct: 409 ----------ACTKNIAVWTSMLCSYASHGQGRIAIELFERMTAEKMTPNEITLVGVLSA 458
Query: 342 CSSLATMERG----KQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHAR--LAYKRIST 395
CS + + G KQ+ G + +VD+Y + G L A+ + I+
Sbjct: 459 CSHVGLVSEGELYFKQMQE---EYGIVPSIEHYNCIVDLYGRSGLLDKAKNFIEENNINH 515
Query: 396 PDLVSQNAMLTAYAMHGHGK 415
+V + +L+A +H H +
Sbjct: 516 EAIVWKT-LLSACRLHQHNE 534
>gi|449433319|ref|XP_004134445.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Cucumis sativus]
Length = 606
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 182/545 (33%), Positives = 288/545 (52%), Gaps = 38/545 (6%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
++V+W+A+I G QNG A+ M ++ + PN T VL A L+ + GK+ H
Sbjct: 72 SVVTWTALIAGSVQNGCFVSALLHFSDMLSDCVRPNDFTFPCVLKASTGLRMDTTGKQLH 131
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
+ G +++ FV + D+Y + G + A K+F
Sbjct: 132 ALAVKEGLINDVFVGCSVFDMYSKLGFLNDAYKVF------------------------- 166
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
D+M H R + +WN+ IS V + +++ F +LL R G +P S TF +
Sbjct: 167 ------DEMPH----RNLETWNAYISNSVLHGRPEDSVIAFIELL-RVGGKPDSITFCAF 215
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
L AC+D L G ++H I G + V L++ Y + ++ ++M FD + +
Sbjct: 216 LNACSDKLGLGPGCQLHGFIIRSGYGQNVSVSNGLIDFYGKCGEVECSEMVFDRMGERNS 275
Query: 298 LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAY 357
+ + N A LF D+ P + V +L AC+ L+ +E G+ V A
Sbjct: 276 VSWSSLIAAYVQNNEEEKASCLFLRARKEDIEPTDFMVSSVLCACAGLSEIEFGRSVQAL 335
Query: 358 AIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEG 417
A++ + ++ + +ALVDMY KCGS+ +A A+ + +LVS NA+L YA GH +
Sbjct: 336 AVKACVEQNIFVASALVDMYGKCGSIDNAEQAFNAMPERNLVSWNALLGGYAHQGHANKA 395
Query: 418 IAHFRRIL-ASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMV 475
+A + A+G P ++S + ALSAC AG +KTG + F+ M Y V+P +HY C+V
Sbjct: 396 VALLEEMTSAAGIVPSYVSLICALSACSRAGDLKTGMKIFESMKERYGVEPGPEHYACLV 455
Query: 476 DLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTG 535
DLL RAG + AY+FIK++P P +WGALLG C HG E G++AA++L EL+P ++G
Sbjct: 456 DLLGRAGMVECAYDFIKRMPFPPTISIWGALLGACRMHGKPELGKLAAEKLFELDPKDSG 515
Query: 536 NYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEE 595
N+V+L+N+FA GRW ++ R +MK+ + K G SWI IH F+A D+SH++ E
Sbjct: 516 NHVVLSNMFAATGRWEEVTVVRNEMKEVGIKKGAGFSWITVDSRIHMFQAKDKSHEKDPE 575
Query: 596 IYTII 600
I I+
Sbjct: 576 IQDIL 580
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 108/391 (27%), Positives = 173/391 (44%), Gaps = 40/391 (10%)
Query: 193 RGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKE 252
R +++W ++I+G V N + A F D+L D + P FTF VL A + GK+
Sbjct: 71 RSVVTWTALIAGSVQNGCFVSALLHFSDML-SDCVRPNDFTFPCVLKASTGLRMDTTGKQ 129
Query: 253 IHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVY 312
+HALA+ GL +D FVG ++ +MY + L A FDE+ + N+
Sbjct: 130 LHALAVKEGLINDVFVGCSVFDMYSKLGFLNDAYKVFDEMPH--------------RNLE 175
Query: 313 TWNA--------------MQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYA 358
TWNA + F E+L + PD T L+ACS + G Q+H +
Sbjct: 176 TWNAYISNSVLHGRPEDSVIAFIELLRVGGKPDSITFCAFLNACSDKLGLGPGCQLHGFI 235
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGI 418
IR GY +V + L+D Y KCG ++ + + + R+ + VS ++++ AY + ++
Sbjct: 236 IRSGYGQNVSVSNGLIDFYGKCGEVECSEMVFDRMGERNSVSWSSLIAAYVQNNEEEKAS 295
Query: 419 AHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLL 478
F R P S L AC I+ G L V+ ++ + +VD+
Sbjct: 296 CLFLRARKEDIEPTDFMVSSVLCACAGLSEIEFGRSVQALAVKACVEQNIFVASALVDMY 355
Query: 479 SRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTG--- 535
+ G + A + +P + V W ALLGG G+ A L+E + G
Sbjct: 356 GKCGSIDNAEQAFNAMP-ERNLVSWNALLGGYAHQGHAN----KAVALLEEMTSAAGIVP 410
Query: 536 NYVMLANLFAYAGRWSDLA---RTRQKMKDR 563
+YV L + R DL + + MK+R
Sbjct: 411 SYVSLICALSACSRAGDLKTGMKIFESMKER 441
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 100/229 (43%), Gaps = 37/229 (16%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
YGKCG ++ ++ VF M ER+ VSW+S++ A
Sbjct: 254 YGKCGEVECSEMVFDRMGERNSVSWSSLIAA----------------------------- 284
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
+ QN +E+A + R + E +EP +SSVL ACA L ++ G+
Sbjct: 285 -------YVQNNEEEKASCLFLRARKEDIEPTDFMVSSVLCACAGLSEIEFGRSVQALAV 337
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
+ N FV + LVD+Y +CG + +A + F+ +N VS N ++ GY G+ +A
Sbjct: 338 KACVEQNIFVASALVDMYGKCGSIDNAEQAFNAMPERNLVSWNALLGGYAHQGHANKAVA 397
Query: 182 LFDQMEH-LGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEP 229
L ++M G+ +S +S +F + R G+EP
Sbjct: 398 LLEEMTSAAGIVPSYVSLICALSACSRAGDLKTGMKIFESMKERYGVEP 446
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 8/203 (3%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKCGS+D+A++ F MPER+ VSWN+++ A G +A+ LE M+S P+ V
Sbjct: 354 MYGKCGSIDNAEQAFNAMPERNLVSWNALLGGYAHQGHANKAVALLEEMTSAAGIVPSYV 413
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
S + ++ G + + + M+ G+EP + ++ R + +F
Sbjct: 414 SLICALSACSRAGDLKTGMKIFESMKERYGVEPGPEHYACLVDLLGRAGMVECAYDF--- 470
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDM-LSALKIFSKFSIKNEVSCNTIIVG--YCENGNV 176
I R F + L+ R G L L F + + S N +++ + G
Sbjct: 471 IKRMPFPPTISIWGALLGACRMHGKPELGKLAAEKLFELDPKDSGNHVVLSNMFAATGRW 530
Query: 177 AEARELFDQMEHLGVQRGI-ISW 198
E + ++M+ +G+++G SW
Sbjct: 531 EEVTVVRNEMKEVGIKKGAGFSW 553
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 66/157 (42%), Gaps = 1/157 (0%)
Query: 373 LVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPD 432
LV+MYAK L A+L + +V+ A++ +G + HF +L+ RP+
Sbjct: 48 LVNMYAKLDHLNSAKLILELAPCRSVVTWTALIAGSVQNGCFVSALLHFSDMLSDCVRPN 107
Query: 433 HISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIK 492
+F L A TG + L + + + D+ S+ G L +AY+
Sbjct: 108 DFTFPCVLKASTGLRMDTTGKQLHALAVKEGLINDVFVGCSVFDMYSKLGFLNDAYKVFD 167
Query: 493 KIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIEL 529
++P + W A + V HG E IA L+ +
Sbjct: 168 EMPHR-NLETWNAYISNSVLHGRPEDSVIAFIELLRV 203
>gi|449523774|ref|XP_004168898.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g14850-like [Cucumis sativus]
Length = 606
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 182/545 (33%), Positives = 287/545 (52%), Gaps = 38/545 (6%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
++V+W+A+I G QNG A+ M ++ + PN T VL A L+ + GK+ H
Sbjct: 72 SVVTWTALIAGSVQNGCFVSALLHFSDMLSDCVRPNDFTFPCVLKASTGLRMDTTGKQLH 131
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
+ G +++ FV + D+Y + G + A K+F
Sbjct: 132 ALAVKEGLINDVFVGCSVFDMYSKLGFLNDAYKVF------------------------- 166
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
D+M H R + +WN+ IS V + +++ F +LL R G +P S TF
Sbjct: 167 ------DEMPH----RNLETWNAYISNSVLHGRPEDSVIAFIELL-RVGGKPDSITFCXF 215
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
L AC+D L G ++H I G + V L++ Y + ++ ++M FD + +
Sbjct: 216 LNACSDKLGLGPGCQLHGFIIRSGYGQNVSVSNGLIDFYGKCGEVECSEMVFDRMGERNS 275
Query: 298 LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAY 357
+ + N A LF D+ P + V +L AC+ L+ +E G+ V A
Sbjct: 276 VSWSSLIAAYVQNNEEEKASCLFLRARKEDIEPTDFMVSSVLCACAGLSEIEFGRSVQAL 335
Query: 358 AIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEG 417
A++ + ++ + +ALVDMY KCGS+ +A A+ + +LVS NA+L YA GH +
Sbjct: 336 AVKACVEQNIFVASALVDMYGKCGSIDNAEQAFNAMPERNLVSWNALLGGYAHQGHANKA 395
Query: 418 IAHFRRIL-ASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMV 475
+A + A+G P ++S + ALSAC AG +KTG + F+ M Y V+P +HY C+V
Sbjct: 396 VALLEEMTSAAGIVPSYVSLICALSACSRAGDLKTGMKIFESMKERYGVEPGPEHYACLV 455
Query: 476 DLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTG 535
DLL RAG + AY+FIK++P P +WGALLG C HG E G++AA++L EL+P ++G
Sbjct: 456 DLLGRAGMVECAYDFIKRMPFPPTISIWGALLGACRMHGKPELGKLAAEKLFELDPKDSG 515
Query: 536 NYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEE 595
N+V+L+N+FA GRW ++ R +MK+ + K G SWI IH F+A D+SH++ E
Sbjct: 516 NHVVLSNMFAATGRWEEVTVVRNEMKEVGIKKGAGFSWITVDSRIHMFQAKDKSHEKDPE 575
Query: 596 IYTII 600
I I+
Sbjct: 576 IQDIL 580
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/391 (27%), Positives = 173/391 (44%), Gaps = 40/391 (10%)
Query: 193 RGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKE 252
R +++W ++I+G V N + A F D+L D + P FTF VL A + GK+
Sbjct: 71 RSVVTWTALIAGSVQNGCFVSALLHFSDML-SDCVRPNDFTFPCVLKASTGLRMDTTGKQ 129
Query: 253 IHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVY 312
+HALA+ GL +D FVG ++ +MY + L A FDE+ + N+
Sbjct: 130 LHALAVKEGLINDVFVGCSVFDMYSKLGFLNDAYKVFDEMPH--------------RNLE 175
Query: 313 TWNA--------------MQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYA 358
TWNA + F E+L + PD T L+ACS + G Q+H +
Sbjct: 176 TWNAYISNSVLHGRPEDSVIAFIELLRVGGKPDSITFCXFLNACSDKLGLGPGCQLHGFI 235
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGI 418
IR GY +V + L+D Y KCG ++ + + + R+ + VS ++++ AY + ++
Sbjct: 236 IRSGYGQNVSVSNGLIDFYGKCGEVECSEMVFDRMGERNSVSWSSLIAAYVQNNEEEKAS 295
Query: 419 AHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLL 478
F R P S L AC I+ G L V+ ++ + +VD+
Sbjct: 296 CLFLRARKEDIEPTDFMVSSVLCACAGLSEIEFGRSVQALAVKACVEQNIFVASALVDMY 355
Query: 479 SRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTG--- 535
+ G + A + +P + V W ALLGG G+ A L+E + G
Sbjct: 356 GKCGSIDNAEQAFNAMP-ERNLVSWNALLGGYAHQGHAN----KAVALLEEMTSAAGIVP 410
Query: 536 NYVMLANLFAYAGRWSDLA---RTRQKMKDR 563
+YV L + R DL + + MK+R
Sbjct: 411 SYVSLICALSACSRAGDLKTGMKIFESMKER 441
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 100/229 (43%), Gaps = 37/229 (16%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
YGKCG ++ ++ VF M ER+ VSW+S++ A
Sbjct: 254 YGKCGEVECSEMVFDRMGERNSVSWSSLIAA----------------------------- 284
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
+ QN +E+A + R + E +EP +SSVL ACA L ++ G+
Sbjct: 285 -------YVQNNEEEKASCLFLRARKEDIEPTDFMVSSVLCACAGLSEIEFGRSVQALAV 337
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
+ N FV + LVD+Y +CG + +A + F+ +N VS N ++ GY G+ +A
Sbjct: 338 KACVEQNIFVASALVDMYGKCGSIDNAEQAFNAMPERNLVSWNALLGGYAHQGHANKAVA 397
Query: 182 LFDQMEH-LGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEP 229
L ++M G+ +S +S +F + R G+EP
Sbjct: 398 LLEEMTSAAGIVPSYVSLICALSACSRAGDLKTGMKIFESMKERYGVEP 446
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 8/203 (3%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKCGS+D+A++ F MPER+ VSWN+++ A G +A+ LE M+S P+ V
Sbjct: 354 MYGKCGSIDNAEQAFNAMPERNLVSWNALLGGYAHQGHANKAVALLEEMTSAAGIVPSYV 413
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
S + ++ G + + + M+ G+EP + ++ R + +F
Sbjct: 414 SLICALSACSRAGDLKTGMKIFESMKERYGVEPGPEHYACLVDLLGRAGMVECAYDF--- 470
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDM-LSALKIFSKFSIKNEVSCNTIIVG--YCENGNV 176
I R F + L+ R G L L F + + S N +++ + G
Sbjct: 471 IKRMPFPPTISIWGALLGACRMHGKPELGKLAAEKLFELDPKDSGNHVVLSNMFAATGRW 530
Query: 177 AEARELFDQMEHLGVQRGI-ISW 198
E + ++M+ +G+++G SW
Sbjct: 531 EEVTVVRNEMKEVGIKKGAGFSW 553
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 66/157 (42%), Gaps = 1/157 (0%)
Query: 373 LVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPD 432
LV+MYAK L A+L + +V+ A++ +G + HF +L+ RP+
Sbjct: 48 LVNMYAKLDHLNSAKLILELAPCRSVVTWTALIAGSVQNGCFVSALLHFSDMLSDCVRPN 107
Query: 433 HISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIK 492
+F L A TG + L + + + D+ S+ G L +AY+
Sbjct: 108 DFTFPCVLKASTGLRMDTTGKQLHALAVKEGLINDVFVGCSVFDMYSKLGFLNDAYKVFD 167
Query: 493 KIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIEL 529
++P + W A + V HG E IA L+ +
Sbjct: 168 EMPHR-NLETWNAYISNSVLHGRPEDSVIAFIELLRV 203
>gi|413918573|gb|AFW58505.1| hypothetical protein ZEAMMB73_474993 [Zea mays]
Length = 773
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 199/658 (30%), Positives = 304/658 (46%), Gaps = 129/658 (19%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +CG++ DA KVF+ MPERD V+W +V++ C NG E L L M
Sbjct: 159 MYARCGNVRDAVKVFEEMPERDVVAWTAVISGCVRNGESGEGLRYLVEM----------- 207
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEG-LEPNARTLSSVLPACARLQKLSLGKEFHGY 119
R+ +G + PN+RT+ S L AC L +L+ G+ HGY
Sbjct: 208 ----------------------VRLAGDGSVRPNSRTMESGLEACGVLDELNSGRCLHGY 245
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ + G +P V++ L +Y +C A +F + K+ VS ++I YC G + EA
Sbjct: 246 VVKVGIGDSPMVISALFSMYSKCYSTEDACALFLELPEKDVVSWTSLIGIYCRRGLITEA 305
Query: 180 RELFDQMEHLGVQR-----------------------------------GIISWNSMISG 204
ELF QM G+Q ++ N++IS
Sbjct: 306 MELFQQMMESGLQPDEILVSCVLSGLGNNGNVHGGKTFHAVITKRNFGDSVLIGNALISM 365
Query: 205 YVDNSLYDEAFSMFRDLLMRDGIEPTSFTFG----------------------------- 235
Y + D A +FR L RD G
Sbjct: 366 YGKFEMVDSAGRVFRLLHQRDADSWNLMVVGYCKAGCDVKCLELYREMQLRDKYEFWCVA 425
Query: 236 ----SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDE 291
S + +C+ + LR G+ H +I L D+ V L+ MY R A F
Sbjct: 426 DSLVSAISSCSRLAELRLGRSAHCYSIKHLLDEDSSVANVLIGMYGRCGKFDHACKIFG- 484
Query: 292 IENIENLLGKMKEDGFEPNVYTWN--------------AMQLFSEMLSLDLTPDIYTVGI 337
L K+K D V TWN AM L+ +ML LTP+ T+
Sbjct: 485 -------LAKLKGD-----VVTWNTLISSYAHLGHSNAAMSLYDQMLIEGLTPNSTTLIT 532
Query: 338 ILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPD 397
++SAC++L +ERG+++H+Y G+D DV I TAL+DMYAKCG L AR + + D
Sbjct: 533 VISACANLVALERGEKIHSYVKEMGWDYDVSINTALIDMYAKCGQLGIARRIFDSMLQHD 592
Query: 398 LVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFD 457
+V+ N M++ Y MHG K+ + F ++ +P+ ++FL+ LSA H+G ++ G + F
Sbjct: 593 VVAWNVMISGYGMHGEAKQALELFGKMEGGSIKPNGVTFLAILSALCHSGLLEEGRKVFT 652
Query: 458 LMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
M Y ++P+LKHY CMVDLL ++G L EA + + +P+ PD +WG LL C H N E
Sbjct: 653 RMGKYSLEPNLKHYACMVDLLGKSGHLQEAEDMVLAMPIEPDGGIWGTLLSACKLHDNFE 712
Query: 518 FGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIE 575
G A + +P N G Y++++N + A +W ++ + R+ MK+ + K G S ++
Sbjct: 713 MGLRIAKKAFASDPENEGYYILISNSYGGAKKWDEIEKLRETMKNLGVQKGVGWSAVD 770
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 113/468 (24%), Positives = 182/468 (38%), Gaps = 57/468 (12%)
Query: 84 RMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFM----SNPFVVNGLVDVY 139
RM A G P+ T A A L L +G H Y R G + + V + LV +Y
Sbjct: 101 RMLASGARPSPFTAPLAASASAELGALGVGAAVHAYCVRYGLLVGDGDSVAVASSLVYMY 160
Query: 140 RRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWN 199
RCG++ A+K+F + ++ V+ +I G NG E +M L
Sbjct: 161 ARCGNVRDAVKVFEEMPERDVVAWTAVISGCVRNGESGEGLRYLVEMVRLA--------- 211
Query: 200 SMISGYVDNSLYDEAFSMFRDLLMRDG-IEPTSFTFGSVLIACADMNSLRKGKEIHALAI 258
DG + P S T S L AC ++ L G+ +H +
Sbjct: 212 ------------------------GDGSVRPNSRTMESGLEACGVLDELNSGRCLHGYVV 247
Query: 259 ALGLQSDTFVGGALVEMYCR---YQDLVAAQMAFDEIENIE--NLLGKMKEDGFEPNVYT 313
+G+ V AL MY + +D A + E + + +L+G G
Sbjct: 248 KVGIGDSPMVISALFSMYSKCYSTEDACALFLELPEKDVVSWTSLIGIYCRRGL-----I 302
Query: 314 WNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTAL 373
AM+LF +M+ L PD V +LS + + GK HA + + V IG AL
Sbjct: 303 TEAMELFQQMMESGLQPDEILVSCVLSGLGNNGNVHGGKTFHAVITKRNFGDSVLIGNAL 362
Query: 374 VDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASG---FR 430
+ MY K + A ++ + D S N M+ Y G + + +R + F
Sbjct: 363 ISMYGKFEMVDSAGRVFRLLHQRDADSWNLMVVGYCKAGCDVKCLELYREMQLRDKYEFW 422
Query: 431 PDHISFLSALSACVHAGSIKTG--SEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAY 488
S +SA+S+C ++ G + + + D S+ + ++ + R G+ A
Sbjct: 423 CVADSLVSAISSCSRLAELRLGRSAHCYSIKHLLDEDSSVAN--VLIGMYGRCGKFDHAC 480
Query: 489 EFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADR-LIE-LEPNNT 534
+ + D V W L+ G+ D+ LIE L PN+T
Sbjct: 481 KIFGLAKLKGDVVTWNTLISSYAHLGHSNAAMSLYDQMLIEGLTPNST 528
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 118/266 (44%), Gaps = 9/266 (3%)
Query: 198 WNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALA 257
WNS+I + S + A S R +L G P+ FT A A++ +L G +HA
Sbjct: 79 WNSLIRTHHCASDFVAALSAHRRMLA-SGARPSPFTAPLAASASAELGALGVGAAVHAYC 137
Query: 258 IALGL----QSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYT 313
+ GL V +LV MY R ++ A F+E+ + + G N +
Sbjct: 138 VRYGLLVGDGDSVAVASSLVYMYARCGNVRDAVKVFEEMPERDVVAWTAVISGCVRNGES 197
Query: 314 WNAMQLFSEMLSL----DLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHI 369
++ EM+ L + P+ T+ L AC L + G+ +H Y ++ G +
Sbjct: 198 GEGLRYLVEMVRLAGDGSVRPNSRTMESGLEACGVLDELNSGRCLHGYVVKVGIGDSPMV 257
Query: 370 GTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGF 429
+AL MY+KC S + A + + D+VS +++ Y G E + F++++ SG
Sbjct: 258 ISALFSMYSKCYSTEDACALFLELPEKDVVSWTSLIGIYCRRGLITEAMELFQQMMESGL 317
Query: 430 RPDHISFLSALSACVHAGSIKTGSEF 455
+PD I LS + G++ G F
Sbjct: 318 QPDEILVSCVLSGLGNNGNVHGGKTF 343
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 86/378 (22%), Positives = 152/378 (40%), Gaps = 76/378 (20%)
Query: 253 IHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVY 312
+HALA+ GL + LV Y A +AF P+ +
Sbjct: 32 VHALAVTSGLYQRPDLAAKLVSAYSSAGRPGLAALAFSASP--------------RPDAF 77
Query: 313 TWN--------------AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYA 358
WN A+ ML+ P +T + SA + L + G VHAY
Sbjct: 78 LWNSLIRTHHCASDFVAALSAHRRMLASGARPSPFTAPLAASASAELGALGVGAAVHAYC 137
Query: 359 IRCGY---DSD-VHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHG 414
+R G D D V + ++LV MYA+CG+++ A ++ + D+V+ A+++ +G
Sbjct: 138 VRYGLLVGDGDSVAVASSLVYMYARCGNVRDAVKVFEEMPERDVVAWTAVISGCVRNGES 197
Query: 415 KEGIAHF---RRILASG-FRPDHISFLSALSA-----------CVHAGSIKTG------- 452
EG+ + R+ G RP+ + S L A C+H +K G
Sbjct: 198 GEGLRYLVEMVRLAGDGSVRPNSRTMESGLEACGVLDELNSGRCLHGYVVKVGIGDSPMV 257
Query: 453 -SEFF----------DLMAYYDVKPS--LKHYTCMVDLLSRAGELGEAYEFIKKI---PM 496
S F D A + P + +T ++ + R G + EA E +++ +
Sbjct: 258 ISALFSMYSKCYSTEDACALFLELPEKDVVSWTSLIGIYCRRGLITEAMELFQQMMESGL 317
Query: 497 APDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLAN-LFAYAGRWSDLAR 555
PD ++ +L G ++GN+ G+ + + N G+ V++ N L + G++ +
Sbjct: 318 QPDEILVSCVLSGLGNNGNVHGGKTFHAVITK---RNFGDSVLIGNALISMYGKFEMVDS 374
Query: 556 TRQKMKDRRMHKSPGCSW 573
+ R +H+ SW
Sbjct: 375 AGRVF--RLLHQRDADSW 390
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 97/217 (44%), Gaps = 28/217 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG L A+++F M + D V+WN +++ +G +ALE +M + PN V
Sbjct: 571 MYAKCGQLGIARRIFDSMLQHDVVAWNVMISGYGMHGEAKQALELFGKMEG-GSIKPNGV 629
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
++ A++ +G EE + RM LEPN + + ++ LGK H
Sbjct: 630 TFLAILSALCHSGLLEEGRKVFTRMGKYSLEPNLKHYACMVDL--------LGKSGHLQE 681
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSI-------------KNEVSCNTII 167
+ ++ P +G + G +LSA K+ F + +NE I
Sbjct: 682 AEDMVLAMPIEPDGGI-----WGTLLSACKLHDNFEMGLRIAKKAFASDPENEGYYILIS 736
Query: 168 VGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISG 204
Y E +L + M++LGVQ+G + W+++ G
Sbjct: 737 NSYGGAKKWDEIEKLRETMKNLGVQKG-VGWSAVDYG 772
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 74/166 (44%), Gaps = 5/166 (3%)
Query: 353 QVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHG 412
+VHA A+ G + LV Y+ G A LA+ PD N+++ +
Sbjct: 31 RVHALAVTSGLYQRPDLAAKLVSAYSSAGRPGLAALAFSASPRPDAFLWNSLIRTHHCAS 90
Query: 413 HGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDV----KPSL 468
++ RR+LASG RP + A SA G++ G+ Y + S+
Sbjct: 91 DFVAALSAHRRMLASGARPSPFTAPLAASASAELGALGVGAAVHAYCVRYGLLVGDGDSV 150
Query: 469 KHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
+ +V + +R G + +A + +++P D V W A++ GCV +G
Sbjct: 151 AVASSLVYMYARCGNVRDAVKVFEEMP-ERDVVAWTAVISGCVRNG 195
>gi|357132450|ref|XP_003567843.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Brachypodium distachyon]
Length = 868
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 198/602 (32%), Positives = 302/602 (50%), Gaps = 74/602 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG ++ A+KVF M DC+
Sbjct: 239 MYAKCGDVEAARKVFDGMSLTDCI------------------------------------ 262
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A+I G +N E + + M + +EPN T++SV A L L KE H
Sbjct: 263 SWNAMIAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVTVASGLLSDLDFAKEIHALA 322
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ GF + DV CN++I Y G + EA
Sbjct: 323 VKRGFAT---------DV----------------------AFCNSLIQMYSSLGRMGEAC 351
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+F +ME R +SW +MISGY N D+A ++ L+ + + P T S L A
Sbjct: 352 TVFSRME----TRDAMSWTAMISGYEKNGFPDKALEVYA-LMEVNNVSPDDVTVASALAA 406
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA + L G ++H LA + G V ALVEMY + + + A F + + + +
Sbjct: 407 CASLGRLDVGIKLHELATSKGFIRYIVVANALVEMYAKSKIIEKAIEVFKYMPDKDVISW 466
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
GF N + A+ F ML+ D+ P+ T L+AC++ ++ GK++HA+ +R
Sbjct: 467 SSMIAGFCFNHKNFEALYYFRHMLA-DVKPNSVTFIAALAACAATGSLRCGKEIHAHVLR 525
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
G S+ ++ AL+D+Y KCG +A + T D+VS N ML + HGHG ++
Sbjct: 526 QGIASEGYVPNALLDLYVKCGQTGYAWAQFGAHGTKDVVSWNIMLAGFVAHGHGDIALSF 585
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLLS 479
F +L +G PD ++F++ L C AG + G E F M Y + P+LKHY CMVDLLS
Sbjct: 586 FNEMLETGEHPDEVTFVALLCGCSRAGMVSQGWELFHSMTEKYSIVPNLKHYACMVDLLS 645
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
R G L E Y FI ++P+ PD+ +WGALL GC H N+E G++AA ++ELEPN+ G +V+
Sbjct: 646 RVGRLTEGYNFINRMPITPDAAVWGALLNGCRIHRNIELGELAAKIVLELEPNDAGYHVL 705
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTI 599
L++L+A AG W+++++ R+ M+ + + GCSW+E + IH F D SH + +EI +
Sbjct: 706 LSDLYADAGMWAEVSKVRKTMRVKGLEHDYGCSWVEVKGAIHAFLTDDESHPQIKEINDV 765
Query: 600 ID 601
+D
Sbjct: 766 LD 767
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 137/511 (26%), Positives = 239/511 (46%), Gaps = 49/511 (9%)
Query: 5 CGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSA 64
CG D A F + N++++ G A + +M D + SW+
Sbjct: 117 CGHADAAHGTFGLRLG------NAMLSMLVRFGETWHAWKVFAKMPERD-----VFSWNV 165
Query: 65 VIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNG 124
++GG+ + G+ EEA+ + RM G P+ T VL +C + L++G+E H ++ R G
Sbjct: 166 MVGGYGKAGFLEEALDLYHRMLWAGARPDVYTFPCVLRSCGGVPDLTMGREVHAHVLRFG 225
Query: 125 FMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFD 184
V+N LV +Y +CGD V AR++FD
Sbjct: 226 LGVEVDVLNALVTMYAKCGD-------------------------------VEAARKVFD 254
Query: 185 QMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADM 244
M ISWN+MI+G+ +N + +F +L D +EP T SV +A +
Sbjct: 255 GMS----LTDCISWNAMIAGHFENHECEAGLELFLHML-EDEVEPNLMTITSVTVASGLL 309
Query: 245 NSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKE 304
+ L KEIHALA+ G +D +L++MY + A F +E + +
Sbjct: 310 SDLDFAKEIHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMI 369
Query: 305 DGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYD 364
G+E N + A+++++ M +++PD TV L+AC+SL ++ G ++H A G+
Sbjct: 370 SGYEKNGFPDKALEVYALMEVNNVSPDDVTVASALAACASLGRLDVGIKLHELATSKGFI 429
Query: 365 SDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRI 424
+ + ALV+MYAK ++ A +K + D++S ++M+ + + E + +FR +
Sbjct: 430 RYIVVANALVEMYAKSKIIEKAIEVFKYMPDKDVISWSSMIAGFCFNHKNFEALYYFRHM 489
Query: 425 LASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGEL 484
LA +P+ ++F++AL+AC GS++ G E + + ++DL + G+
Sbjct: 490 LAD-VKPNSVTFIAALAACAATGSLRCGKEIHAHVLRQGIASEGYVPNALLDLYVKCGQT 548
Query: 485 GEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
G A+ D V W +L G V+HG+
Sbjct: 549 GYAWAQFGA-HGTKDVVSWNIMLAGFVAHGH 578
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 174/362 (48%), Gaps = 7/362 (1%)
Query: 174 GNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFT 233
G A ++F +M +R + SWN M+ GY +EA ++ +L G P +T
Sbjct: 143 GETWHAWKVFAKMP----ERDVFSWNVMVGGYGKAGFLEEALDLYHRMLWA-GARPDVYT 197
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
F VL +C + L G+E+HA + GL + V ALV MY + D+ AA+ FD +
Sbjct: 198 FPCVLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAARKVFDGMS 257
Query: 294 NIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ 353
+ + G N ++LF ML ++ P++ T+ + A L+ ++ K+
Sbjct: 258 LTDCISWNAMIAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVTVASGLLSDLDFAKE 317
Query: 354 VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGH 413
+HA A++ G+ +DV +L+ MY+ G + A + R+ T D +S AM++ Y +G
Sbjct: 318 IHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMISGYEKNGF 377
Query: 414 GKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTC 473
+ + + + + PD ++ SAL+AC G + G + +L +
Sbjct: 378 PDKALEVYALMEVNNVSPDDVTVASALAACASLGRLDVGIKLHELATSKGFIRYIVVANA 437
Query: 474 MVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG-CVSHGNLEFGQIAADRLIELEPN 532
+V++ +++ + +A E K +P D + W +++ G C +H N E L +++PN
Sbjct: 438 LVEMYAKSKIIEKAIEVFKYMP-DKDVISWSSMIAGFCFNHKNFEALYYFRHMLADVKPN 496
Query: 533 NT 534
+
Sbjct: 497 SV 498
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 117/267 (43%), Gaps = 4/267 (1%)
Query: 268 VGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLD 327
+G A++ M R+ + A F ++ + + G+ + A+ L+ ML
Sbjct: 131 LGNAMLSMLVRFGETWHAWKVFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRMLWAG 190
Query: 328 LTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHAR 387
PD+YT +L +C + + G++VHA+ +R G +V + ALV MYAKCG ++ AR
Sbjct: 191 ARPDVYTFPCVLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAAR 250
Query: 388 LAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAG 447
+ +S D +S NAM+ + + + G+ F +L P+ ++ S A
Sbjct: 251 KVFDGMSLTDCISWNAMIAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVTVASGLLS 310
Query: 448 SIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALL 507
+ E L + ++ + S G +GEA ++ D++ W A++
Sbjct: 311 DLDFAKEIHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETR-DAMSWTAMI 369
Query: 508 GGCVSHGNLEFGQIAADRLIELEPNNT 534
G +G F A + +E NN
Sbjct: 370 SGYEKNG---FPDKALEVYALMEVNNV 393
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 78/180 (43%), Gaps = 9/180 (5%)
Query: 361 CGYDSDVH------IGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHG 414
CG+ H +G A++ M + G HA + ++ D+ S N M+ Y G
Sbjct: 117 CGHADAAHGTFGLRLGNAMLSMLVRFGETWHAWKVFAKMPERDVFSWNVMVGGYGKAGFL 176
Query: 415 KEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCM 474
+E + + R+L +G RPD +F L +C + G E + + + + +
Sbjct: 177 EEALDLYHRMLWAGARPDVYTFPCVLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNAL 236
Query: 475 VDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLI--ELEPN 532
V + ++ G++ A + + + D + W A++ G + E G ++ E+EPN
Sbjct: 237 VTMYAKCGDVEAARKVFDGMSLT-DCISWNAMIAGHFENHECEAGLELFLHMLEDEVEPN 295
>gi|147770185|emb|CAN69881.1| hypothetical protein VITISV_024112 [Vitis vinifera]
Length = 734
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 166/526 (31%), Positives = 275/526 (52%), Gaps = 37/526 (7%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
NLVSW VI + +NG E+AI + MQA G+ PN+ S+L +C L LGK+ H
Sbjct: 152 NLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQMH 211
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
++ R +N V + ++Y RCG + A +F +N V+
Sbjct: 212 SHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVT--------------- 256
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
W ++ GY + A +F + M +G+E F F V
Sbjct: 257 --------------------WTGLMVGYTQAKKLEVALELFARMAM-EGVELDEFVFSIV 295
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
L C + GK+IH+ + LG +S+ VG LV+ Y + D+ +A +F I +
Sbjct: 296 LKVCCXLEDWDMGKQIHSHIVKLGXESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPND 355
Query: 298 LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAY 357
+ GF + + +++F+ + S + + + + AC++ A + G Q H
Sbjct: 356 VSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGD 415
Query: 358 AIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEG 417
AI+ G S ++ +A+V MY+KCG L +AR A++ I PD V+ A+++ YA HG+ E
Sbjct: 416 AIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEA 475
Query: 418 IAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVD 476
+ FRR+ + G RP+ ++F++ L+AC H+G + ++ M+ Y VKP++ HY CM+D
Sbjct: 476 LGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMID 535
Query: 477 LLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGN 536
SRAG L EA E I ++P PD++ W +LLGGC +H +L+ G+IAA+ L L+P +T
Sbjct: 536 TYSRAGLLXEALELINRMPFEPDAMSWKSLLGGCWAHCDLKLGKIAAENLFRLDPGDTAG 595
Query: 537 YVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHK 582
Y++L NL++ G+W + R+ M +R + K CSWI + ++H+
Sbjct: 596 YILLFNLYSAFGKWEEAGHVRKLMAERELKKEVSCSWISVKGQVHR 641
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 120/454 (26%), Positives = 212/454 (46%), Gaps = 51/454 (11%)
Query: 69 FTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSN 128
++ G +EA L M + + + AC +L+ L+ G+ H + R + N
Sbjct: 62 LSKQGKLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRT--VKN 119
Query: 129 PFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEH 188
P +G ++ N ++ YC+ G+ + +++FD+M
Sbjct: 120 P---SGSIE--------------------------NCLLRMYCDCGSXIDVQKVFDEM-- 148
Query: 189 LGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLR 248
+ + ++SW +IS Y N ++A +F D+ GI P S + S+L +C + L
Sbjct: 149 --LMKNLVSWVIVISAYAKNGELEKAIRLFSDM-QASGIRPNSAVYMSLLQSCLGPSFLE 205
Query: 249 KGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFD--EIENIENLLGKMKEDG 306
GK++H+ I L ++ V A+ MY R L A++ FD + +N G M G
Sbjct: 206 LGKQMHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMV--G 263
Query: 307 FEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSD 366
+ A++LF+ M + D + I+L C L + GKQ+H++ ++ G +S+
Sbjct: 264 YTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCXLEDWDMGKQIHSHIVKLGXESE 323
Query: 367 VHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILA 426
V +GT LVD Y KCG ++ A ++ RIS P+ VS +A+++ ++ G ++ I F + +
Sbjct: 324 VSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRS 383
Query: 427 SGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYD-VKPSLKHY----TCMVDLLSRA 481
G + + S AC ++ GS+ A+ D +K L Y + MV + S+
Sbjct: 384 EGVVLNSFIYTSVFQACAAQANLNMGSQ-----AHGDAIKRGLVSYLYGESAMVTMYSKC 438
Query: 482 GELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
G L A + I PD+V W A++ G HGN
Sbjct: 439 GRLDYARRAFESID-EPDAVAWTAIISGYAYHGN 471
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 156/365 (42%), Gaps = 38/365 (10%)
Query: 55 ETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGK 114
+ N V+W+ ++ G+TQ E A+ + RM EG+E + S VL C L+ +GK
Sbjct: 250 DAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCXLEDWDMGK 309
Query: 115 EFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
+ H +I + G S V LVD Y +CGD+ SA + F + S N+VS + +I G+ ++G
Sbjct: 310 QIHSHIVKLGXESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSG 369
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTF 234
+ + ++F L +G+ SF +
Sbjct: 370 RLEDCIKIFTS------------------------------------LRSEGVVLNSFIY 393
Query: 235 GSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIEN 294
SV ACA +L G + H AI GL S + A+V MY + L A+ AF+ I+
Sbjct: 394 TSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDE 453
Query: 295 IENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV 354
+ + G+ + A+ F M S + P+ T +L+ACS + KQ
Sbjct: 454 PDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQY 513
Query: 355 HAYAIR-CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNAMLTAYAMHG 412
R G + ++D Y++ G L A R+ PD +S ++L H
Sbjct: 514 LGSMSRDYGVKPTIDHYDCMIDTYSRAGLLXEALELINRMPFEPDAMSWKSLLGGCWAHC 573
Query: 413 HGKEG 417
K G
Sbjct: 574 DLKLG 578
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 127/292 (43%), Gaps = 3/292 (1%)
Query: 227 IEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQ 286
+ T ++ + AC + SL G+ IH + L+ MYC + Q
Sbjct: 83 VSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVKNPSGSIENCLLRMYCDCGSXIDVQ 142
Query: 287 MAFDEIENIENLLG-KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSL 345
FDE+ ++NL+ + + N A++LFS+M + + P+ +L +C
Sbjct: 143 KVFDEML-MKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNSAVYMSLLQSCLGP 201
Query: 346 ATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAML 405
+ +E GKQ+H++ IR ++++ + TA+ +MY +CG L+ A+L + + + V+ ++
Sbjct: 202 SFLELGKQMHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLM 261
Query: 406 TAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVK 465
Y + + F R+ G D F L C G + + +
Sbjct: 262 VGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCXLEDWDMGKQIHSHIVKLGXE 321
Query: 466 PSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
+ T +VD + G++ AY +I P+ V W AL+ G G LE
Sbjct: 322 SEVSVGTPLVDFYVKCGDIESAYRSFGRIS-EPNDVSWSALISGFSQSGRLE 372
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 94/218 (43%), Gaps = 12/218 (5%)
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
GK+KE A EM D++ ++ + AC L ++ G+ +H
Sbjct: 66 GKLKE-----------AHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLR 114
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
R + I L+ MY CGS + + + +LVS +++AYA +G ++ I
Sbjct: 115 RTVKNPSGSIENCLLRMYCDCGSXIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIR 174
Query: 420 HFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLS 479
F + ASG RP+ ++S L +C+ ++ G + + + ++ T + ++
Sbjct: 175 LFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQMHSHVIRAQLNANITVETAICNMYV 234
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
R G L E + + A ++V W L+ G LE
Sbjct: 235 RCGWL-EGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLE 271
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 102/252 (40%), Gaps = 62/252 (24%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVV------------------------------ 30
MY KCG LD A++ F+ + E D V+W +++
Sbjct: 434 MYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVT 493
Query: 31 -----TACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRM 85
TAC+ +GLV EA + L MS P + + +I +++ G EA+ ++ RM
Sbjct: 494 FIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLXEALELINRM 553
Query: 86 QAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNG---LVDVYRRC 142
EP+A + S+L C L LGK N F +P G L ++Y
Sbjct: 554 P---FEPDAMSWKSLLGGCWAHCDLKLGK----IAAENLFRLDPGDTAGYILLFNLYSAF 606
Query: 143 GDMLSA---LKIFSKFSIKNEVSCNTIIVG---------YCENGNV-----AEARELFDQ 185
G A K+ ++ +K EVSC+ I V E +V A +L D
Sbjct: 607 GKWEEAGHVRKLMAERELKKEVSCSWISVKGQVHRPVRLLNEEDDVSCSLPARKEQLLDH 666
Query: 186 MEHLGVQRGIIS 197
E L + G+IS
Sbjct: 667 SEKLAIAFGLIS 678
>gi|242088929|ref|XP_002440297.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
gi|241945582|gb|EES18727.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
Length = 869
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 193/602 (32%), Positives = 303/602 (50%), Gaps = 74/602 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG + A+KVF M DC+
Sbjct: 239 MYAKCGDVVAARKVFDSMAVMDCI------------------------------------ 262
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A+I G +NG + + M + ++PN T++SV A L ++ KE HG
Sbjct: 263 SWNAMIAGHFENGECNAGLELFLTMLQDEVQPNLMTITSVTVASGLLSDITFAKEMHGLA 322
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ GF ++ CN++I Y G + +AR
Sbjct: 323 VKRGFATDV-------------------------------AFCNSLIQMYASLGMMGQAR 351
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+F +M+ R +SW +MISGY N D+A ++ L+ + + P T S L A
Sbjct: 352 TVFSRMD----TRDAMSWTAMISGYEKNGFPDKALEVYA-LMEVNNVSPDDITIASALAA 406
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA + SL G ++H LA + G S V AL+EMY + + + A F + + +
Sbjct: 407 CACLGSLDVGVKLHELAESKGFMSYVVVTNALLEMYAKSKRIDKAIEVFKCMPEKDVVSW 466
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
GF N + A+ F ML+ D+ P+ T L+AC++ + GK++HA+ +R
Sbjct: 467 SSMIAGFCFNHRNFEALYYFRHMLA-DVKPNSVTFIAALAACAATGALRSGKEIHAHVLR 525
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
CG + ++ AL+D+Y KCG +A + D+VS N M+ + HG+G+ ++
Sbjct: 526 CGIAYEGYLPNALIDLYVKCGQTGYAWAQFCAHGAKDVVSWNIMIAGFVAHGNGETALSF 585
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLLS 479
F +++ G PD ++F++ L AC G + G E F M Y + P+LKHY CMVDLLS
Sbjct: 586 FNQMVKIGECPDEVTFVALLCACSRGGMVSEGWELFHSMTDKYSIVPNLKHYACMVDLLS 645
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
R G+L EAY FI ++P+ PD+ +WGALL GC H ++E G++AA ++ELEPN+ G +V+
Sbjct: 646 RVGQLTEAYNFINEMPITPDAAVWGALLNGCRIHRHVELGELAAKYVLELEPNDAGYHVL 705
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTI 599
L +L+A AG W LAR R+ M+++ + GCSW+E + +H F D SH + EI T+
Sbjct: 706 LCDLYADAGIWDKLARVRKTMREKGLDHDSGCSWVEVKGVVHAFLTDDESHPQIREINTV 765
Query: 600 ID 601
++
Sbjct: 766 LE 767
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 126/466 (27%), Positives = 232/466 (49%), Gaps = 50/466 (10%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
++ SW+ ++GG+ + G EEA+ + RM G+ P+ T VL +C + +G+E H
Sbjct: 159 DVFSWNVMVGGYGKAGLLEEALDLYHRMMWAGVRPDVYTFPCVLRSCGGVPDWRMGREVH 218
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
++ R GF V+N L+ +Y +CGD V
Sbjct: 219 AHVLRFGFAEEVDVLNALMTMYAKCGD-------------------------------VV 247
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
AR++FD M + ISWN+MI+G+ +N + +F +L +D ++P T SV
Sbjct: 248 AARKVFDSMAVMDC----ISWNAMIAGHFENGECNAGLELFLTML-QDEVQPNLMTITSV 302
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
+A ++ + KE+H LA+ G +D +L++MY + A+ F ++ +
Sbjct: 303 TVASGLLSDITFAKEMHGLAVKRGFATDVAFCNSLIQMYASLGMMGQARTVFSRMDTRDA 362
Query: 298 LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAY 357
+ G+E N + A+++++ M +++PD T+ L+AC+ L +++ G ++H
Sbjct: 363 MSWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHEL 422
Query: 358 AIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEG 417
A G+ S V + AL++MYAK + A +K + D+VS ++M+ + + E
Sbjct: 423 AESKGFMSYVVVTNALLEMYAKSKRIDKAIEVFKCMPEKDVVSWSSMIAGFCFNHRNFEA 482
Query: 418 IAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDL-----MAYYDVKPSLKHYT 472
+ +FR +LA +P+ ++F++AL+AC G++++G E +AY P+
Sbjct: 483 LYYFRHMLAD-VKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIAYEGYLPN----- 536
Query: 473 CMVDLLSRAGELGEAY-EFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
++DL + G+ G A+ +F A D V W ++ G V+HGN E
Sbjct: 537 ALIDLYVKCGQTGYAWAQFCAH--GAKDVVSWNIMIAGFVAHGNGE 580
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 97/362 (26%), Positives = 176/362 (48%), Gaps = 7/362 (1%)
Query: 174 GNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFT 233
G A +F +M +R + SWN M+ GY L +EA ++ + M G+ P +T
Sbjct: 143 GETWHAWRVFAKMP----ERDVFSWNVMVGGYGKAGLLEEALDLYHRM-MWAGVRPDVYT 197
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
F VL +C + R G+E+HA + G + V AL+ MY + D+VAA+ FD +
Sbjct: 198 FPCVLRSCGGVPDWRMGREVHAHVLRFGFAEEVDVLNALMTMYAKCGDVVAARKVFDSMA 257
Query: 294 NIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ 353
++ + G N ++LF ML ++ P++ T+ + A L+ + K+
Sbjct: 258 VMDCISWNAMIAGHFENGECNAGLELFLTMLQDEVQPNLMTITSVTVASGLLSDITFAKE 317
Query: 354 VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGH 413
+H A++ G+ +DV +L+ MYA G + AR + R+ T D +S AM++ Y +G
Sbjct: 318 MHGLAVKRGFATDVAFCNSLIQMYASLGMMGQARTVFSRMDTRDAMSWTAMISGYEKNGF 377
Query: 414 GKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTC 473
+ + + + + PD I+ SAL+AC GS+ G + +L +
Sbjct: 378 PDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFMSYVVVTNA 437
Query: 474 MVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG-CVSHGNLEFGQIAADRLIELEPN 532
++++ +++ + +A E K +P D V W +++ G C +H N E L +++PN
Sbjct: 438 LLEMYAKSKRIDKAIEVFKCMP-EKDVVSWSSMIAGFCFNHRNFEALYYFRHMLADVKPN 496
Query: 533 NT 534
+
Sbjct: 497 SV 498
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 137/323 (42%), Gaps = 24/323 (7%)
Query: 212 DEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGA 271
D ++FR R +EP L ACA + + HA GL+ +G A
Sbjct: 95 DAYVALFRLCEWRRAVEPG-------LRACAHAD------DRHAW---FGLR----LGNA 134
Query: 272 LVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPD 331
++ M R+ + A F ++ + + G+ A+ L+ M+ + PD
Sbjct: 135 MLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKAGLLEEALDLYHRMMWAGVRPD 194
Query: 332 IYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYK 391
+YT +L +C + G++VHA+ +R G+ +V + AL+ MYAKCG + AR +
Sbjct: 195 VYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFAEEVDVLNALMTMYAKCGDVVAARKVFD 254
Query: 392 RISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKT 451
++ D +S NAM+ + +G G+ F +L +P+ ++ S A I
Sbjct: 255 SMAVMDCISWNAMIAGHFENGECNAGLELFLTMLQDEVQPNLMTITSVTVASGLLSDITF 314
Query: 452 GSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCV 511
E L + ++ + + G +G+A ++ D++ W A++ G
Sbjct: 315 AKEMHGLAVKRGFATDVAFCNSLIQMYASLGMMGQARTVFSRMD-TRDAMSWTAMISGYE 373
Query: 512 SHGNLEFGQIAADRLIELEPNNT 534
+G F A + +E NN
Sbjct: 374 KNG---FPDKALEVYALMEVNNV 393
>gi|15226150|ref|NP_180924.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75101011|sp|P93005.1|PP181_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g33680
gi|1707007|gb|AAC69139.1| hypothetical protein [Arabidopsis thaliana]
gi|330253774|gb|AEC08868.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 727
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 197/670 (29%), Positives = 321/670 (47%), Gaps = 107/670 (15%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y KCG L A +F + +D VSWNS++T
Sbjct: 59 YAKCGKLAKAHSIFNAIICKDVVSWNSLIT------------------------------ 88
Query: 62 WSAVIGGFTQNG--YDEEAIGMLFR-MQAEGLEPNARTLSSVLPACARLQKLSLGKEFHG 118
G++QNG + LFR M+A+ + PNA TL+ + A + LQ ++G++ H
Sbjct: 89 ------GYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHA 142
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
+ + + +V LV +Y + G + LK+F+ +N + +T++ GY G V E
Sbjct: 143 LVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEE 202
Query: 179 ARELFD---------------------------------QMEHLGVQRGIISW----NSM 201
A ++F+ Q+ + ++ G++ + N++
Sbjct: 203 AIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNAL 262
Query: 202 ISGYVDNSLYDEAFSMFRDLLMRD------------------------------GIEPTS 231
++ Y +EA MF R+ GI+P+
Sbjct: 263 VTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSE 322
Query: 232 FTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDE 291
+T VL AC+D+ L +GK++H+ + LG + F ALV+MY + L A+ FD
Sbjct: 323 YTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDC 382
Query: 292 IENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG 351
++ + L G+ N A+ L+ M + + P+ T+ +L ACSSLAT+E G
Sbjct: 383 LQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELG 442
Query: 352 KQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMH 411
KQVH + I+ G+ +V IG+AL MY+KCGSL+ L ++R D+VS NAM++ + +
Sbjct: 443 KQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHN 502
Query: 412 GHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKH 470
G G E + F +LA G PD ++F++ +SAC H G ++ G +F++M+ + P + H
Sbjct: 503 GQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDH 562
Query: 471 YTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELE 530
Y CMVDLLSRAG+L EA EFI+ + +W LL C +HG E G A ++L+ L
Sbjct: 563 YACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALG 622
Query: 531 PNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSH 590
+ YV L+ ++ GR D+ R + M+ + K GCSWIE +++ H F D H
Sbjct: 623 SRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQYHVFVVGDTMH 682
Query: 591 DRSEEIYTII 600
EE ++
Sbjct: 683 PMIEETKDLV 692
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 110/463 (23%), Positives = 195/463 (42%), Gaps = 84/463 (18%)
Query: 90 LEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSAL 149
L P+ TL L ++ + L G+ HG I R G + N LV+ Y +CG + A
Sbjct: 10 LNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAH 69
Query: 150 KIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNS 209
IF N + C + ++SWNS+I+GY N
Sbjct: 70 SIF------NAIIC-----------------------------KDVVSWNSLITGYSQNG 94
Query: 210 LYDEAFS---MFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDT 266
+++ +FR++ +D I P ++T + A + + S G++ HAL + + D
Sbjct: 95 GISSSYTVMQLFREMRAQD-ILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDI 153
Query: 267 FVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGF-------EPNVYTWNAM-- 317
+V +LV MYC+ + EDG E N YTW+ M
Sbjct: 154 YVDTSLVGMYCK---------------------AGLVEDGLKVFAYMPERNTYTWSTMVS 192
Query: 318 ------------QLFSEML--SLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGY 363
++F+ L + + Y +LS+ ++ + G+Q+H I+ G
Sbjct: 193 GYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGL 252
Query: 364 DSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRR 423
V + ALV MY+KC SL A + + ++ +AM+T Y+ +G E + F R
Sbjct: 253 LGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSR 312
Query: 424 ILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGE 483
+ ++G +P + + L+AC ++ G + + + L T +VD+ ++AG
Sbjct: 313 MFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGC 372
Query: 484 LGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRL 526
L +A + + D +W +L+ G V + + E I R+
Sbjct: 373 LADARKGFDCLQ-ERDVALWTSLISGYVQNSDNEEALILYRRM 414
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 95/229 (41%), Gaps = 13/229 (5%)
Query: 327 DLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHA 386
+L P T+ L+ S + G+ VH IR G + + LV+ YAKCG L A
Sbjct: 9 ELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKA 68
Query: 387 RLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH-------FRRILASGFRPDHISFLSA 439
+ I D+VS N+++T Y+ +G GI+ FR + A P+ +
Sbjct: 69 HSIFNAIICKDVVSWNSLITGYSQNG----GISSSYTVMQLFREMRAQDILPNAYTLAGI 124
Query: 440 LSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPD 499
A S G + L+ + T +V + +AG + + + +P +
Sbjct: 125 FKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMP-ERN 183
Query: 500 SVMWGALLGGCVSHGNLEFG-QIAADRLIELEPNNTGNYVMLANLFAYA 547
+ W ++ G + G +E ++ L E E + +YV A L + A
Sbjct: 184 TYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLA 232
>gi|413932452|gb|AFW67003.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 719
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 183/601 (30%), Positives = 297/601 (49%), Gaps = 80/601 (13%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y +CGSL A++VF+ M E P++V
Sbjct: 180 LYSRCGSLRAAEEVFRRM------------------------------------EAPDVV 203
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+++++ +NG A+ +L +M +GL+PN T++S+L C R +G++ HGY+
Sbjct: 204 GYTSLVSALCRNGELARAVDVLCQMTRQGLQPNEHTMTSMLAECPR----GIGEQIHGYM 259
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ + + L+D Y R GD +A +F KN
Sbjct: 260 LKVMGSQSVYASTALIDFYSRYGDFGTAKTVFENLESKN--------------------- 298
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
++SW SM+ + + D+A +F +++ +G++P F F L A
Sbjct: 299 --------------VVSWCSMMQLCIRDGRLDDALRVFSEMI-SEGVQPNEFAFSIALSA 343
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C S+ G++IH AI L +D V AL+ MY R + + +IEN + +
Sbjct: 344 CG---SVCLGRQIHCSAIKRDLMTDIRVSNALLSMYGRSGFVSELEAVLGKIENPDLVSW 400
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
N ++ A+ L +M S TP+ Y LS+C+ LA + +G+Q+H A++
Sbjct: 401 TAAISANFQNGFSEKAVALLLQMHSEGFTPNDYAFSSGLSSCADLALLHQGRQLHCLALK 460
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
G D V G AL++MY+KCG + ARLA+ + T D++S N+++ A HG +
Sbjct: 461 LGCDFKVCTGNALINMYSKCGRIGSARLAFDVMDTHDVMSWNSLIHGLAQHGDANLALET 520
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLLS 479
F + +S +RPD +FLS L C HAG +K G FF M Y + P+ HY CM+D+L
Sbjct: 521 FSEMCSSDWRPDDSTFLSVLVGCNHAGLVKEGETFFRQMTDRYGLTPTPSHYACMIDMLG 580
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
R G EA I+ +P PD ++W LL C H NL+ G++AAD+L+EL ++ +YV+
Sbjct: 581 RNGRFAEALRMIENMPFEPDVLIWKTLLASCKLHRNLDIGKLAADKLMELSERDSASYVL 640
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTI 599
++NL+A W D R R++M + + K G SWIE ++E++ F A D SH S IY +
Sbjct: 641 MSNLYAMHEEWRDAERVRRRMDEIGVKKDAGWSWIEVKNEVNTFVAGDMSHPDSTSIYQM 700
Query: 600 I 600
+
Sbjct: 701 L 701
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 98/398 (24%), Positives = 186/398 (46%), Gaps = 21/398 (5%)
Query: 169 GYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIE 228
G ++G + +A +LFD+M ++ +++W + ISG N + A +MF D+L G+
Sbjct: 79 GLMKSGRLGDALDLFDRMP----RKNVVAWTTAISGCTRNGRPEAAATMFADML-ESGVA 133
Query: 229 PTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMA 288
P F + L ACA +L G+++H+LA+ G +D ++G L+E+Y R L AA+
Sbjct: 134 PNDFACNAALAACAAAGALGLGEQVHSLAVRAGFAADAWIGSCLIELYSRCGSLRAAEEV 193
Query: 289 FDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATM 348
F +E + + N A+ + +M L P+ +T+ +L+ C
Sbjct: 194 FRRMEAPDVVGYTSLVSALCRNGELARAVDVLCQMTRQGLQPNEHTMTSMLAECPR---- 249
Query: 349 ERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAY 408
G+Q+H Y ++ V+ TAL+D Y++ G A+ ++ + + ++VS +M+
Sbjct: 250 GIGEQIHGYMLKVMGSQSVYASTALIDFYSRYGDFGTAKTVFENLESKNVVSWCSMMQLC 309
Query: 409 AMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSL 468
G + + F +++ G +P+ +F ALSAC GS+ G + D+ +
Sbjct: 310 IRDGRLDDALRVFSEMISEGVQPNEFAFSIALSAC---GSVCLGRQIHCSAIKRDLMTDI 366
Query: 469 KHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIE 528
+ ++ + R+G + E + KI PD V W A + +G F + A L++
Sbjct: 367 RVSNALLSMYGRSGFVSELEAVLGKIE-NPDLVSWTAAISANFQNG---FSEKAVALLLQ 422
Query: 529 LEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMH 566
+ N +A++ S A + R++H
Sbjct: 423 MHSEG-----FTPNDYAFSSGLSSCADLALLHQGRQLH 455
>gi|449482847|ref|XP_004156421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 833
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 173/561 (30%), Positives = 303/561 (54%), Gaps = 25/561 (4%)
Query: 52 LDNETPNLVSW-----SAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACAR 106
+ +L SW S F QN + E + + L+P S +L C R
Sbjct: 7 FQKRSSHLPSWVTSLISPFRNQFHQNPFPETSSTFVLNH----LDP-----SFLLSICGR 57
Query: 107 LQKLSLGKEFHGYITRNGFMSNPF----VVNGLVDVYRRCGDMLSALKIFSKFSIKNEVS 162
L LG H I ++ +SN + ++N L+ +Y RCG + A+K+F + ++ +S
Sbjct: 58 EGNLHLGSSLHASIIKSFELSNHYNGVVIMNSLISMYDRCGKLPDAVKVFDEMVTRDTIS 117
Query: 163 CNTIIVGYCENGN--VAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRD 220
N +I G+ NG ++F +M +R +I+W ++ISG N ++ + +F++
Sbjct: 118 WNALIGGFVRNGKFFAGLGMQVFYEMG----ERNVITWTAVISGLAQNGYHEHSLKLFKE 173
Query: 221 LLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQ 280
++ +EP S T+ S+L AC+ + +L++G +IH L + LG+QSD +G AL++MY +
Sbjct: 174 MMSYGSVEPNSLTYLSLLTACSGLEALKEGCQIHGLIMKLGIQSDLCIGSALMDMYSKSG 233
Query: 281 DLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILS 340
+ A F+ E ++ + + GF N A+Q+F +ML + + D V ++L
Sbjct: 234 RIGEAWKIFELAEELDMVSLTVILAGFTHNGCEEEAIQIFLKMLKMGIEIDGNVVSVVLG 293
Query: 341 ACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVS 400
+ ++ G+QVH++ ++ + + + L++MY+KCG+L + + R+ + V+
Sbjct: 294 VFGADTSLRLGQQVHSFVVKRNFICNPFVSNGLINMYSKCGALDESMKVFDRMRERNSVT 353
Query: 401 QNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA 460
N+M+ A+A HG + + + + G +P ++FLS L AC HAG +K G EF M
Sbjct: 354 WNSMIAAFARHGDALKALQLYEDMQLEGAKPTDVTFLSLLHACSHAGLVKKGMEFLKSMT 413
Query: 461 Y-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFG 519
+ + P +H+ C+VD+L RAG L EA FI+K+P P ++W ALLG C +G+ + G
Sbjct: 414 KDHGMNPRSEHHACVVDMLGRAGMLSEARNFIEKLPEQPGLLVWQALLGACSLYGDSKIG 473
Query: 520 QIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDE 579
+ AA+ L P++ YV+LAN+++ G W + ART +KMK+ K G SWIE +
Sbjct: 474 KYAAEHLFSETPDSPVPYVLLANIYSSEGNWKERARTIRKMKEVGTAKETGISWIEIDKK 533
Query: 580 IHKFRASDRSHDRSEEIYTII 600
+H F D+ H ++E IY ++
Sbjct: 534 VHSFTVGDKMHPQTEMIYGVL 554
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 115/426 (26%), Positives = 189/426 (44%), Gaps = 54/426 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEAL------ECLERMSSLDN 54
MY +CG L DA KVF M RD +SWN+++ NG L E ER
Sbjct: 93 MYDRCGKLPDAVKVFDEMVTRDTISWNALIGGFVRNGKFFAGLGMQVFYEMGER------ 146
Query: 55 ETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEG-LEPNARTLSSVLPACARLQKLSLG 113
N+++W+AVI G QNGY E ++ + M + G +EPN+ T S+L AC+ L+ L G
Sbjct: 147 ---NVITWTAVISGLAQNGYHEHSLKLFKEMMSYGSVEPNSLTYLSLLTACSGLEALKEG 203
Query: 114 KEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCEN 173
+ HG I + G S+ + + L+D+Y + G + A KIF + VS I+ G+ N
Sbjct: 204 CQIHGLIMKLGIQSDLCIGSALMDMYSKSGRIGEAWKIFELAEELDMVSLTVILAGFTHN 263
Query: 174 GNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFT 233
G EA ++F +M +G++ +D ++ +F
Sbjct: 264 GCEEEAIQIFLKMLKMGIE-------------IDGNVVSVVLGVFG-------------- 296
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
AD SLR G+++H+ + + FV L+ MY + L + FD +
Sbjct: 297 --------AD-TSLRLGQQVHSFVVKRNFICNPFVSNGLINMYSKCGALDESMKVFDRMR 347
Query: 294 NIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ 353
++ F + A+QL+ +M P T +L ACS +++G +
Sbjct: 348 ERNSVTWNSMIAAFARHGDALKALQLYEDMQLEGAKPTDVTFLSLLHACSHAGLVKKGME 407
Query: 354 -VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRI-STPDLVSQNAMLTAYAMH 411
+ + G + +VDM + G L AR +++ P L+ A+L A +++
Sbjct: 408 FLKSMTKDHGMNPRSEHHACVVDMLGRAGMLSEARNFIEKLPEQPGLLVWQALLGACSLY 467
Query: 412 GHGKEG 417
G K G
Sbjct: 468 GDSKIG 473
>gi|356506884|ref|XP_003522204.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Glycine max]
Length = 752
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 176/602 (29%), Positives = 295/602 (49%), Gaps = 73/602 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G ++ +VFK M +R N+V
Sbjct: 201 MYMKVGKIEQGCRVFKKMTKR------------------------------------NVV 224
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A+I G GY+ EA+ M + ++ T + L A A L GK H
Sbjct: 225 SWTAIIAGLVHAGYNMEALLYFSEMWISKVGYDSHTFAIALKASADSSLLHHGKAIHTQT 284
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ GF + FV+N L +Y +CG +++F K + +
Sbjct: 285 IKQGFDESSFVINTLATMYNKCGKADYVMRLFEKMKMPD--------------------- 323
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
++SW ++I+ YV + A F+ + + + P +TF +V+ A
Sbjct: 324 --------------VVSWTTLITTYVQKGEEEHAVEAFKRM-RKSNVSPNKYTFAAVISA 368
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA++ + G++IH + LGL V ++V +Y + L +A + F I + +
Sbjct: 369 CANLAIAKWGEQIHGHVLRLGLVDALSVANSIVTLYSKSGLLKSASLVFHGITRKDIISW 428
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
+ Y A S M P+ + + +LS C S+A +E+GKQVHA+ +
Sbjct: 429 STIIAVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHVLC 488
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
G D + + +AL+ MY+KCGS++ A + + +++S AM+ YA HG+ +E I
Sbjct: 489 IGIDHEAMVHSALISMYSKCGSVEEASKIFNGMKINNIISWTAMINGYAEHGYSQEAINL 548
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLS 479
F +I + G +PD+++F+ L+AC HAG + G +F LM Y + PS +HY C++DLL
Sbjct: 549 FEKISSVGLKPDYVTFIGVLTACSHAGMVDLGFYYFMLMTNEYQISPSKEHYGCIIDLLC 608
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
RAG L EA I+ +P D V+W LL C HG+++ G+ A++L+ L+PN+ G ++
Sbjct: 609 RAGRLSEAEHMIRSMPCYTDDVVWSTLLRSCRVHGDVDRGRWTAEQLLRLDPNSAGTHIA 668
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTI 599
LAN++A GRW + A R+ MK + + K G SW+ D+++ F A D++H +SE I T+
Sbjct: 669 LANIYAAKGRWKEAAHIRKLMKSKGVIKERGWSWVNVNDKLNAFVAGDQAHPQSEHITTV 728
Query: 600 ID 601
++
Sbjct: 729 LE 730
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 118/494 (23%), Positives = 217/494 (43%), Gaps = 53/494 (10%)
Query: 27 NSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQ 86
NS + G + ++ ++M+ D +SW+ +I G+ EA+ + M
Sbjct: 94 NSELKQLVKQGQLCKSRYMFDKMTHRDE-----ISWTTLIAGYVNASDSYEALILFSNMW 148
Query: 87 AE-GLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDM 145
+ GL+ + +S L AC + G+ HG+ ++G +++ FV + L+D+Y + G +
Sbjct: 149 VQPGLQRDQFMISVALKACGLGVNICFGELLHGFSVKSGLINSVFVSSALIDMYMKVGKI 208
Query: 146 LSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGY 205
++F K + +N VS II G G EA F +M W S +
Sbjct: 209 EQGCRVFKKMTKRNVVSWTAIIAGLVHAGYNMEALLYFSEM-----------WISKVG-- 255
Query: 206 VDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSD 265
YD S TF L A AD + L GK IH I G
Sbjct: 256 -----YD------------------SHTFAIALKASADSSLLHHGKAIHTQTIKQGFDES 292
Query: 266 TFVGGALVEMY--CRYQDLVA---AQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLF 320
+FV L MY C D V +M ++ + L+ + G E +A++ F
Sbjct: 293 SFVINTLATMYNKCGKADYVMRLFEKMKMPDVVSWTTLITTYVQKGEEE-----HAVEAF 347
Query: 321 SEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKC 380
M +++P+ YT ++SAC++LA + G+Q+H + +R G + + ++V +Y+K
Sbjct: 348 KRMRKSNVSPNKYTFAAVISACANLAIAKWGEQIHGHVLRLGLVDALSVANSIVTLYSKS 407
Query: 381 GSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSAL 440
G LK A L + I+ D++S + ++ Y+ G+ KE + + G +P+ + S L
Sbjct: 408 GLLKSASLVFHGITRKDIISWSTIIAVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVL 467
Query: 441 SACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDS 500
S C ++ G + + + ++ ++ + S+ G + EA + + + +
Sbjct: 468 SVCGSMALLEQGKQVHAHVLCIGIDHEAMVHSALISMYSKCGSVEEASKIFNGMKI-NNI 526
Query: 501 VMWGALLGGCVSHG 514
+ W A++ G HG
Sbjct: 527 ISWTAMINGYAEHG 540
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 161/354 (45%), Gaps = 5/354 (1%)
Query: 155 FSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEA 214
+S+ N + N+ + + G + ++R +FD+M H R ISW ++I+GYV+ S EA
Sbjct: 85 YSVHNMLELNSELKQLVKQGQLCKSRYMFDKMTH----RDEISWTTLIAGYVNASDSYEA 140
Query: 215 FSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVE 274
+F ++ ++ G++ F L AC ++ G+ +H ++ GL + FV AL++
Sbjct: 141 LILFSNMWVQPGLQRDQFMISVALKACGLGVNICFGELLHGFSVKSGLINSVFVSSALID 200
Query: 275 MYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYT 334
MY + + F ++ + G Y A+ FSEM + D +T
Sbjct: 201 MYMKVGKIEQGCRVFKKMTKRNVVSWTAIIAGLVHAGYNMEALLYFSEMWISKVGYDSHT 260
Query: 335 VGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS 394
I L A + + + GK +H I+ G+D + L MY KCG + ++++
Sbjct: 261 FAIALKASADSSLLHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKADYVMRLFEKMK 320
Query: 395 TPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSE 454
PD+VS ++T Y G + + F+R+ S P+ +F + +SAC + K G +
Sbjct: 321 MPDVVSWTTLITTYVQKGEEEHAVEAFKRMRKSNVSPNKYTFAAVISACANLAIAKWGEQ 380
Query: 455 FFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLG 508
+ + +L +V L S++G L A I D + W ++
Sbjct: 381 IHGHVLRLGLVDALSVANSIVTLYSKSGLLKSASLVFHGITR-KDIISWSTIIA 433
>gi|326527617|dbj|BAK08083.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 642
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 168/502 (33%), Positives = 280/502 (55%), Gaps = 7/502 (1%)
Query: 100 VLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKN 159
V +CA G++ H + G + + FV+ LVD Y + GDM SA+ +F + +K+
Sbjct: 125 VFKSCALTASSCQGRQVHCHALVRGLLGDVFVLTALVDFYAKNGDMESAVSVFDEMPVKD 184
Query: 160 EVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFR 219
+ N +I GY + G+V +AR LFD ME +R SWNSMI+ Y + EA ++F
Sbjct: 185 PIPINCLITGYSKAGDVDKARRLFDGME----RRTSASWNSMIACYAHGGEFREALTLF- 239
Query: 220 DLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRY 279
D ++ +G P + T SV CA L GK + L LQ + V AL+EMY +
Sbjct: 240 DRMLSEGARPNAITITSVFSICAKSGDLDTGKRVRDLIGEDDLQ-NVIVHTALMEMYVKC 298
Query: 280 QDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIIL 339
+ + A+ FD + + + G+ N +++LF M + D P+ T+ ++
Sbjct: 299 RAIDDARREFDRMSQRDVVAWSTMIAGYAQNGRPLESLELFERMKATDCRPNEVTLVGVI 358
Query: 340 SACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLV 399
SAC+ L + E +Q+ YA ++G+AL+DMY +CG + AR + R+ ++
Sbjct: 359 SACAQLGSDELVEQIGNYAENQRLPLTSYLGSALIDMYTRCGHVGRARSVFSRMEQKGVI 418
Query: 400 SQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM 459
+ N+M+ AM+G ++ I+ + ++ +G +P+ I+F++ L+AC HAG + G FF+ M
Sbjct: 419 TWNSMIRGLAMNGFAEDAISLYEKMAENGVQPNEITFVALLAACTHAGLVDQGMAFFEEM 478
Query: 460 AY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEF 518
+ V P ++H C+VDLL ++G L EAY+FI + + P++V+W LL C +H ++E
Sbjct: 479 KREHLVSPQVEHCACIVDLLCKSGGLWEAYKFICDMEVEPNAVIWTTLLSSCRAHADVEL 538
Query: 519 GQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRD 578
++A+ +L+ +EP+N+ YV+L+N++A AG W D R M+ + + K SWI+
Sbjct: 539 AKLASRKLLAMEPDNSSIYVLLSNIYADAGLWGDAREIRDLMRSKNVQKLSAYSWIKLDG 598
Query: 579 EIHKFRASDRSHDRSEEIYTII 600
E+HKF D H RS EIY +I
Sbjct: 599 EVHKFLVQDTYHPRSAEIYDVI 620
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 119/470 (25%), Positives = 196/470 (41%), Gaps = 53/470 (11%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y K G ++ A VF MP +D + N ++T + G V +A + M E S
Sbjct: 164 YAKNGDMESAVSVFDEMPVKDPIPINCLITGYSKAGDVDKARRLFDGM-----ERRTSAS 218
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W+++I + G EA+ + RM +EG PNA T++SV CA+ L GK I
Sbjct: 219 WNSMIACYAHGGEFREALTLFDRMLSEGARPNAITITSVFSICAKSGDLDTGKRVRDLIG 278
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
+ + N V L+++Y +C + A + F + S ++ V+ +T+I GY +NG E+ E
Sbjct: 279 EDD-LQNVIVHTALMEMYVKCRAIDDARREFDRMSQRDVVAWSTMIAGYAQNGRPLESLE 337
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
LF++M+ + P T V+ AC
Sbjct: 338 LFERMKATDCR------------------------------------PNEVTLVGVISAC 361
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK 301
A + S ++I A L +++G AL++MY R + A+ F +E +
Sbjct: 362 AQLGSDELVEQIGNYAENQRLPLTSYLGSALIDMYTRCGHVGRARSVFSRMEQKGVITWN 421
Query: 302 MKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRC 361
G N + +A+ L+ +M + P+ T +L+AC+ +++G R
Sbjct: 422 SMIRGLAMNGFAEDAISLYEKMAENGVQPNEITFVALLAACTHAGLVDQGMAFFEEMKRE 481
Query: 362 GYDS-DVHIGTALVDMYAKCGSLKHARLAYKRIS----TPDLVSQNAMLTAYAMHGHGKE 416
S V +VD+ K G L AYK I P+ V +L++ H +
Sbjct: 482 HLVSPQVEHCACIVDLLCKSGGLWE---AYKFICDMEVEPNAVIWTTLLSSCRAHADVEL 538
Query: 417 GIAHFRRILASGFRPDHISFLSALSAC-VHAGSIKTGSEFFDLMAYYDVK 465
R++LA PD+ S LS AG E DLM +V+
Sbjct: 539 AKLASRKLLA--MEPDNSSIYVLLSNIYADAGLWGDAREIRDLMRSKNVQ 586
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 107/231 (46%), Gaps = 40/231 (17%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC ++DDA++ F M +RD V+W++++ A NG LE+LE ERM + D PN V
Sbjct: 294 MYVKCRAIDDARREFDRMSQRDVVAWSTMIAGYAQNGRPLESLELFERMKATDCR-PNEV 352
Query: 61 SWSAVIGGFTQNGYDE--EAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHG 118
+ VI Q G DE E IG A Q+L L
Sbjct: 353 TLVGVISACAQLGSDELVEQIGNY----------------------AENQRLPL------ 384
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
++ + L+D+Y RCG + A +FS+ K ++ N++I G NG +
Sbjct: 385 ---------TSYLGSALIDMYTRCGHVGRARSVFSRMEQKGVITWNSMIRGLAMNGFAED 435
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEP 229
A L+++M GVQ I++ ++++ L D+ + F ++ + P
Sbjct: 436 AISLYEKMAENGVQPNEITFVALLAACTHAGLVDQGMAFFEEMKREHLVSP 486
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 100/229 (43%), Gaps = 33/229 (14%)
Query: 317 MQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDM 376
+Q FS M V ++ +C+ A+ +G+QVH +A+ G DV + TALVD
Sbjct: 104 LQTFSSMHRKGAYVPSGCVPLVFKSCALTASSCQGRQVHCHALVRGLLGDVFVLTALVDF 163
Query: 377 YAKCGSLKHARLAYKRISTPDLVSQNAMLTAY---------------------------- 408
YAK G ++ A + + D + N ++T Y
Sbjct: 164 YAKNGDMESAVSVFDEMPVKDPIPINCLITGYSKAGDVDKARRLFDGMERRTSASWNSMI 223
Query: 409 AMHGHG---KEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVK 465
A + HG +E + F R+L+ G RP+ I+ S S C +G + TG DL+ D++
Sbjct: 224 ACYAHGGEFREALTLFDRMLSEGARPNAITITSVFSICAKSGDLDTGKRVRDLIGEDDLQ 283
Query: 466 PSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
+ H T ++++ + + +A ++ D V W ++ G +G
Sbjct: 284 NVIVH-TALMEMYVKCRAIDDARREFDRMSQR-DVVAWSTMIAGYAQNG 330
>gi|297609253|ref|NP_001062888.2| Os09g0327200 [Oryza sativa Japonica Group]
gi|255678787|dbj|BAF24802.2| Os09g0327200 [Oryza sativa Japonica Group]
Length = 739
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 190/596 (31%), Positives = 308/596 (51%), Gaps = 58/596 (9%)
Query: 7 SLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVI 66
SL DA+ +F MP RD V++N ++++ A +GLV A + D VSW+ ++
Sbjct: 115 SLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHYFDLAPEKD-----AVSWNGML 169
Query: 67 GGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFM 126
+ +NG EEA G LF + E + + ++++ + K+S +E + +
Sbjct: 170 AAYVRNGRVEEARG-LFNSRTEW---DVISWNALMSGYVQWGKMSEARELFDRMPGRDVV 225
Query: 127 SNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQM 186
S +V+G Y R GDM+ A ++F +++ + ++ GY +NG + EAR +FD M
Sbjct: 226 SWNIMVSG----YARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAM 281
Query: 187 EHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNS 246
+R +SWN+M++ Y+ + DEA +F + R+ ++ ++L A
Sbjct: 282 P----ERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRN-----VASWNTMLTGYAQAGM 332
Query: 247 LRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDG 306
L + K + Q D A++ Y + G E+
Sbjct: 333 LEEAKAVFDTMP----QKDAVSWAAMLAAYSQ---------------------GGCSEE- 366
Query: 307 FEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSD 366
+QLF EM + +LS C+ +A +E G Q+H IR GY
Sbjct: 367 ---------TLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVG 417
Query: 367 VHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILA 426
+G AL+ MY KCG+++ AR A++ + D+VS N M+ YA HG GKE + F +
Sbjct: 418 CFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRT 477
Query: 427 SGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELG 485
+ +PD I+ + L+AC H+G ++ G +F M + + V +HYTCM+DLL RAG L
Sbjct: 478 TSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLA 537
Query: 486 EAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFA 545
EA++ +K +P PDS MWGALLG H N E G+ AA+++ ELEP N G YV+L+N++A
Sbjct: 538 EAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYA 597
Query: 546 YAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
+G+W D + R M++R + K PG SWIE ++++H F A D H E+IY ++
Sbjct: 598 SSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLE 653
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 97/200 (48%), Gaps = 14/200 (7%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG+++DA+ F+ M ERD VSWN+++ A +G EALE + M + + P+ +
Sbjct: 427 MYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTK-PDDI 485
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
+ V+ + +G E+ I + M + G+ + ++ R +L+ E H
Sbjct: 486 TLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLA---EAHDL 542
Query: 120 ITRNGFMSNPFVVNGLVDVYR--RCGDM--LSALKIFSKFSIKNEVSCNTIIVG--YCEN 173
+ F + + L+ R R ++ +A KI F ++ E + +++ Y +
Sbjct: 543 MKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKI---FELEPENAGMYVLLSNIYASS 599
Query: 174 GNVAEARELFDQMEHLGVQR 193
G +AR++ ME GV++
Sbjct: 600 GKWRDARKMRVMMEERGVKK 619
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 102/527 (19%), Positives = 183/527 (34%), Gaps = 120/527 (22%)
Query: 133 NGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG------------------ 174
N + + R G + A ++F+ ++ + N ++ GY NG
Sbjct: 42 NKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIPRPDNY 101
Query: 175 -------------NVAEARELFDQME---------------------------HLGVQRG 194
++A+AR LFD+M L ++
Sbjct: 102 SYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHYFDLAPEKD 161
Query: 195 IISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIH 254
+SWN M++ YV N +EA +F D I + G V + + +E+
Sbjct: 162 AVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYV-----QWGKMSEARELF 216
Query: 255 ALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTW 314
D +V Y R D+V A+ FD + G+ N
Sbjct: 217 DRMPG----RDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLE 272
Query: 315 NAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALV 374
A ++F M + + +++A M+ K++ + C +V ++
Sbjct: 273 EARRVFDAMPERNAV----SWNAMVAAYIQRRMMDEAKELFNM-MPC---RNVASWNTML 324
Query: 375 DMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHI 434
YA+ G L+ A+ + + D VS AML AY+ G +E + F + G +
Sbjct: 325 TGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRS 384
Query: 435 SFLSALSACVHAGSIKTGSEFFD----------------LMAYY-------DVKPSLKH- 470
+F LS C +++ G + L+A Y D + + +
Sbjct: 385 AFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEM 444
Query: 471 -------YTCMVDLLSRAG---ELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE--- 517
+ M+ +R G E E ++ ++ PD + +L C G +E
Sbjct: 445 EERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGI 504
Query: 518 --FGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKD 562
F + D + +P +Y + +L AGR LA MKD
Sbjct: 505 SYFYSMHHDFGVTAKPE---HYTCMIDLLGRAGR---LAEAHDLMKD 545
>gi|222636858|gb|EEE66990.1| hypothetical protein OsJ_23896 [Oryza sativa Japonica Group]
Length = 659
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 179/532 (33%), Positives = 276/532 (51%), Gaps = 51/532 (9%)
Query: 85 MQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGD 144
M G+ P+ T SVL ACA ++L LG+ H + G N F N L+ +Y +CGD
Sbjct: 141 MGKNGVLPDVFTYPSVLRACAEARELVLGRAVHMHAAGAGMDGNLFFQNALMSMYAKCGD 200
Query: 145 MLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISG 204
+ SA K+F ++ VS N++I Y G AEA ELF +M G
Sbjct: 201 LASARKVFDGMVQRDVVSWNSMISSYAAVGQWAEAMELFRRMRDEGT------------- 247
Query: 205 YVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQS 264
E + R+++ R G E T L AC+ + LR GKEIH LA+ +
Sbjct: 248 --------EPVGLIREMV-RGGAEVDYVTLVIGLNACSRVGWLRLGKEIHGLAVRMCCDQ 298
Query: 265 DTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAM------- 317
V AL+ MY R +D+ A+M F +E P V TWN M
Sbjct: 299 VESVSNALITMYARCKDMECARMLFRMLEC--------------PGVVTWNTMLSSFALS 344
Query: 318 -------QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIG 370
+F EM+ + P+ TV L+ C+ +A ++ G+++H + ++ G+ +
Sbjct: 345 DCAEEASSIFREMICRGVKPNYVTVVTYLALCARVANLQHGQELHGHIVKHGFKGYRLLW 404
Query: 371 TALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFR 430
+L+DMY+K G L A+ + + D++S +M+ Y M G G + F +++ SG +
Sbjct: 405 NSLIDMYSKSGRLSVAQNVFDTMDDCDMISYTSMIAGYGMQGKGTVALRLFEQMIDSGIK 464
Query: 431 PDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYE 489
PDHI ++ LSAC H+G + G E F+ M Y +KP ++HY+CM+DL +RAG L +A E
Sbjct: 465 PDHIIMVTVLSACSHSGLVLEGEELFNKMVISYGIKPQMEHYSCMIDLYARAGLLEKAEE 524
Query: 490 FIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGR 549
+ P P S MW AL+G C GN+E G+ AA +L+E+ N G+YV++AN++A AG
Sbjct: 525 MLDHTPFPPTSTMWAALVGACHDRGNIEIGERAARKLLEMRTENAGHYVLIANMYAAAGC 584
Query: 550 WSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
W +LA R+ M+D + K+PG +W + + F DRS+ + EIY ++D
Sbjct: 585 WDELATVRKLMRDLGVTKAPGLAWTDLGNGFTPFLVGDRSNPLAPEIYVVLD 636
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 113/416 (27%), Positives = 180/416 (43%), Gaps = 60/416 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG L A+KVF M +RD VSWNS++++ AA G EA+E RM D T
Sbjct: 194 MYAKCGDLASARKVFDGMVQRDVVSWNSMISSYAAVGQWAEAMELFRRMR--DEGT---- 247
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
E +G++ M G E + TL L AC+R+ L LGKE HG
Sbjct: 248 ----------------EPVGLIREMVRGGAEVDYVTLVIGLNACSRVGWLRLGKEIHGLA 291
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R V N L+ +Y RC DM A +F V+ NT++
Sbjct: 292 VRMCCDQVESVSNALITMYARCKDMECARMLFRMLECPGVVTWNTML------------- 338
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
S + + +EA S+FR+++ R G++P T + L
Sbjct: 339 ----------------------SSFALSDCAEEASSIFREMICR-GVKPNYVTVVTYLAL 375
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA + +L+ G+E+H + G + + +L++MY + L AQ FD +++ + +
Sbjct: 376 CARVANLQHGQELHGHIVKHGFKGYRLLWNSLIDMYSKSGRLSVAQNVFDTMDDCDMISY 435
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV-HAYAI 359
G+ A++LF +M+ + PD + +LSACS + G+++ + I
Sbjct: 436 TSMIAGYGMQGKGTVALRLFEQMIDSGIKPDHIIMVTVLSACSHSGLVLEGEELFNKMVI 495
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGK 415
G + + ++D+YA+ G L+ A P + A L A H G
Sbjct: 496 SYGIKPQMEHYSCMIDLYARAGLLEKAEEMLDHTPFPPTSTMWAALVG-ACHDRGN 550
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 118/275 (42%), Gaps = 39/275 (14%)
Query: 247 LRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDG 306
LR G ++HAL+++LGL + L+ +Y + L+ + + +GK +G
Sbjct: 89 LRLGVQLHALSLSLGLSRHPILLPRLLSVYTSHPSLLPSAASVAAALAAYQEMGK---NG 145
Query: 307 FEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSD 366
P+V+T+ + +L AC+ + G+ VH +A G D +
Sbjct: 146 VLPDVFTYPS---------------------VLRACAEARELVLGRAVHMHAAGAGMDGN 184
Query: 367 VHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILA 426
+ AL+ MYAKCG L AR + + D+VS N+M+++YA G E + FRR+
Sbjct: 185 LFFQNALMSMYAKCGDLASARKVFDGMVQRDVVSWNSMISSYAAVGQWAEAMELFRRMRD 244
Query: 427 SGFRP--------------DHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYT 472
G P D+++ + L+AC G ++ G E L
Sbjct: 245 EGTEPVGLIREMVRGGAEVDYVTLVIGLNACSRVGWLRLGKEIHGLAVRMCCDQVESVSN 304
Query: 473 CMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALL 507
++ + +R ++ E + ++ P V W +L
Sbjct: 305 ALITMYARCKDM-ECARMLFRMLECPGVVTWNTML 338
>gi|449453750|ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
gi|449506934|ref|XP_004162888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1067
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 189/603 (31%), Positives = 307/603 (50%), Gaps = 79/603 (13%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG+++DA VF++M +D V+WN
Sbjct: 433 MYAKCGAINDACVVFRLMDNKDSVTWN--------------------------------- 459
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
++I G QN EA+ M+ L P+ T+ S L +CA L +S+G++ H
Sbjct: 460 ---SMITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMISALSSCASLGWISVGEQLHCEG 516
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G + V N L+ +Y CG + K FS
Sbjct: 517 LKLGLDLDVSVSNALLALYGECGYVKECQKAFS--------------------------- 549
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDN--SLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
L +H +SWNS+I D+ S+ + S ++MR G +P TF ++L
Sbjct: 550 -LMLDYDH-------VSWNSLIGALADSEPSMLEAVESFL--VMMRAGWDPNRVTFITIL 599
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
A + ++ GK+IHAL + + +DT + AL+ Y + D+ + F + + ++
Sbjct: 600 AAVSSLSLHELGKQIHALVLKRNVAADTAIENALLACYGKCGDMGYCENIFSRMSDRQDE 659
Query: 299 LG-KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAY 357
+ G+ N AM + M+ D +T +LSAC+++AT+ERG +VH
Sbjct: 660 VSWNSMISGYIHNELLPKAMDMVWFMMQKGQRLDGFTFATVLSACATVATLERGMEVHGC 719
Query: 358 AIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEG 417
++R +SD+ IG+ALVDMYAKCG + +A ++ + +L S N+M++ YA HGHG +
Sbjct: 720 SVRACLESDIVIGSALVDMYAKCGRIDYASRFFEMMPARNLYSWNSMISGYARHGHGTKS 779
Query: 418 IAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVD 476
+ F ++ G PDH++F+ LSAC HAG + G FD M+ Y + P ++H++CMVD
Sbjct: 780 LDLFAQMKLQGPLPDHVTFVGVLSACSHAGLVNEGFSHFDSMSEIYGLAPRMEHFSCMVD 839
Query: 477 LLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG--NLEFGQIAADRLIELEPNNT 534
LL R GEL + +F+ ++P+ P+ ++W +LG C N G+ AA+ L+E+EP N
Sbjct: 840 LLGRVGELNKMEDFLNQMPVKPNVLIWRTVLGACCRANGRNTALGRRAAEMLLEMEPTNA 899
Query: 535 GNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSE 594
NY++L+N++A G+W D+A+TR M+ + K GCSW+ +D +H F A D+SH +
Sbjct: 900 VNYILLSNMYASGGKWDDVAKTRVAMRKAFVKKEAGCSWVTMKDGVHVFVAGDKSHPEKD 959
Query: 595 EIY 597
IY
Sbjct: 960 LIY 962
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 138/530 (26%), Positives = 234/530 (44%), Gaps = 102/530 (19%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y + G L +KVF MP R NLV
Sbjct: 117 IYARVGDLGSGRKVFDEMPLR------------------------------------NLV 140
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQK--LSLGKEFHG 118
SWS +I G+T+N EA + +M ++G PN SV+ AC + L G + HG
Sbjct: 141 SWSCLISGYTRNRMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHG 200
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGDMLS-ALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
+++ ++++ N L+ +Y M+ A + F +N VS N++I YC+ G+
Sbjct: 201 LMSKTQYVNDVTASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAV 260
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
A ++F M+ +M DG++P +TFGS+
Sbjct: 261 SAFDIFSTMQ--------------------------------KEVMGDGLKPNEYTFGSL 288
Query: 238 LIA-CADMNS-LRKGKEIHALAIALGLQSDTFVGGALVEMYCR-----YQDLVAAQMAFD 290
+ A C+ NS L +++ G D +VG ALV + + Y + +M++
Sbjct: 289 ISATCSLANSGLVLLEQLLTRVEKSGFLHDLYVGSALVSGFAKAGSIGYAKNIFQKMSYR 348
Query: 291 EIENIENL-LGKMKEDGFEPNVYTWNAMQLFSEML-SLDLTPDIYTVGIILSACSSLATM 348
+ ++ L +G +++ E A++LF EM S++L P+ Y IIL+A +
Sbjct: 349 NVVSLNGLIIGLVRQKRGE------EAVELFMEMKDSVELNPNSYM--IILTAFPEFHVL 400
Query: 349 ERGK----QVHAYAIRCG-YDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNA 403
E GK +VHA+ IR G ++ + IG L++MYAKCG++ A + ++ + D V+ N+
Sbjct: 401 ENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDACVVFRLMDNKDSVTWNS 460
Query: 404 MLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFF--DLMAY 461
M+T + E + F+ + + P + + +SALS+C G I G + L
Sbjct: 461 MITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMISALSSCASLGWISVGEQLHCEGLKLG 520
Query: 462 YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAP--DSVMWGALLGG 509
D+ S+ + LL+ GE G E K + D V W +L+G
Sbjct: 521 LDLDVSVSN-----ALLALYGECGYVKECQKAFSLMLDYDHVSWNSLIGA 565
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 106/442 (23%), Positives = 201/442 (45%), Gaps = 64/442 (14%)
Query: 113 GKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCE 172
+E H + +NGF+++ F+ N L+++Y R GD+ S K+F + ++N VS + +I GY
Sbjct: 92 AEELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGYTR 151
Query: 173 NGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSF 232
N EA ELF +M + DG P +
Sbjct: 152 NRMPNEACELFRKM------------------------------------VSDGFMPNHY 175
Query: 233 TFGSVLIACADMNS--LRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLV-AAQMAF 289
FGSV+ AC + L+ G +IH L +D L+ MY +V A+ AF
Sbjct: 176 AFGSVIRACQECGEYGLKFGMQIHGLMSKTQYVNDVTASNVLISMYGNALGMVDYARRAF 235
Query: 290 DEI-----ENIENLLGKMKEDGFEPNVY-TWNAMQLFSEMLSLDLTPDIYTVGIILSACS 343
D I ++ +++ + G + + ++ MQ E++ L P+ YT G ++SA
Sbjct: 236 DSIWPRNLVSLNSMISVYCQRGDAVSAFDIFSTMQ--KEVMGDGLKPNEYTFGSLISATC 293
Query: 344 SLAT--MERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQ 401
SLA + +Q+ + G+ D+++G+ALV +AK GS+ +A+ ++++S ++VS
Sbjct: 294 SLANSGLVLLEQLLTRVEKSGFLHDLYVGSALVSGFAKAGSIGYAKNIFQKMSYRNVVSL 353
Query: 402 NAMLTAYAMHGHGKEGIAHFRRILAS-GFRPDHISFLSALSACVHAGSIKTGSEFFDLMA 460
N ++ G+E + F + S P+ S++ L+A ++ G +
Sbjct: 354 NGLIIGLVRQKRGEEAVELFMEMKDSVELNPN--SYMIILTAFPEFHVLENGKRKGSEVH 411
Query: 461 YYDVKPSLKHYTC-----MVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
+ ++ L + ++++ ++ G + +A + ++ DSV W +++ G N
Sbjct: 412 AFLIRSGLLNAQIAIGNGLINMYAKCGAINDAC-VVFRLMDNKDSVTWNSMITGL--DQN 468
Query: 516 LEFGQIAAD----RLIELEPNN 533
+F + R EL P+N
Sbjct: 469 KQFLEAVKTFQEMRRTELYPSN 490
>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 695
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 174/549 (31%), Positives = 291/549 (53%), Gaps = 39/549 (7%)
Query: 55 ETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGK 114
+ P +++ +I G + A+ + +M + ++ + T SSVL AC+R++ L G+
Sbjct: 82 DKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSRMKALREGE 141
Query: 115 EFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
+ H I ++GF SN FV N L+ +Y C G
Sbjct: 142 QVHALILKSGFKSNEFVENTLIQMYANC-------------------------------G 170
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLL-MRDGIEPTSFT 233
+ AR +FD M +R I++WNSM+SGY N L+DE +FR +L +R IE T
Sbjct: 171 QIGVARHVFDGMP----ERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELR--IEFDDVT 224
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
SVL+AC + +L G+ I ++ GL+ + + +L++MY + + A+ FDE++
Sbjct: 225 MISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMD 284
Query: 294 NIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ 353
+ + G+ A+ LF EM ++ P+ T+ +L +C+ L E GK
Sbjct: 285 KRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKW 344
Query: 354 VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGH 413
VH Y + V +GT L+D YAKCG + + +K +S ++ + A++ A +G
Sbjct: 345 VHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGE 404
Query: 414 GKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYT 472
GK + F +L + +P+ ++F+ LSAC HA + G F+ M +D++P ++HY
Sbjct: 405 GKMALEFFSSMLENDVKPNDVTFIGVLSACSHACLVDQGRHLFNSMRRDFDIEPRIEHYG 464
Query: 473 CMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPN 532
CMVD+L RAG L EAY+FI +P P++V+W LL C +H N+E + + + + LEP
Sbjct: 465 CMVDILGRAGFLEEAYQFIDNMPFPPNAVVWRTLLASCRAHKNIEMAEKSLEHITRLEPA 524
Query: 533 NTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDR 592
++G+Y++L+N +A GR D R R +K++ + K PGCS IE +H+F + D H
Sbjct: 525 HSGDYILLSNTYALVGRVEDAIRVRSLIKEKEIKKIPGCSLIELDGVVHEFFSEDGEHKH 584
Query: 593 SEEIYTIID 601
S+EI+ +D
Sbjct: 585 SKEIHDALD 593
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 110/439 (25%), Positives = 179/439 (40%), Gaps = 97/439 (22%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY CG + A+ VF MPER V+WNS+++ NGL
Sbjct: 165 MYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNGL---------------------- 202
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
W V+ LFR E +E + T+ SVL AC RL L +G+ Y
Sbjct: 203 -WDEVVK--------------LFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEY 247
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
I G N + L+D+Y +CG + +A K+F + ++ V+ + +I GY + EA
Sbjct: 248 IVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEA 307
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
LF +M Q+G + P T SVL
Sbjct: 308 LNLFHEM-----QKG-------------------------------NVYPNEVTMVSVLY 331
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMY--CRYQDL---VAAQMAFDEIEN 294
+CA + + GK +H ++ +G L++ Y C Y D V +M+F +
Sbjct: 332 SCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFT 391
Query: 295 IENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV 354
L+ G N A++ FS ML D+ P+ T +LSACS +++G+ +
Sbjct: 392 WTALI-----QGLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSACSHACLVDQGRHL 446
Query: 355 HAYAIRCGYDSDVHIGT--ALVDMYAKCGSLKHARLAYKRIST----PDLVSQNAMLTAY 408
++R +D + I +VD+ + G L+ AY+ I P+ V +L +
Sbjct: 447 FN-SMRRDFDIEPRIEHYGCMVDILGRAGFLEE---AYQFIDNMPFPPNAVVWRTLLASC 502
Query: 409 AMHGH---GKEGIAHFRRI 424
H + ++ + H R+
Sbjct: 503 RAHKNIEMAEKSLEHITRL 521
Score = 45.4 bits (106), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 36/181 (19%), Positives = 75/181 (41%), Gaps = 6/181 (3%)
Query: 336 GIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKC--GSLKHARLAYKRI 393
+IL C + ++ QVHA+ ++ D I A+++ A ++ +A + I
Sbjct: 25 SLILQQCKTPKDLQ---QVHAHLLKTRRLLDPIITEAVLESAALLLPDTIDYALSIFNHI 81
Query: 394 STPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGS 453
P+ + N M+ A + F+++ + D +F S L AC +++ G
Sbjct: 82 DKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSRMKALREGE 141
Query: 454 EFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSH 513
+ L+ K + ++ + + G++G A +P V W ++L G +
Sbjct: 142 QVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMP-ERSIVAWNSMLSGYTKN 200
Query: 514 G 514
G
Sbjct: 201 G 201
>gi|326495056|dbj|BAJ85624.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 673
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 187/575 (32%), Positives = 289/575 (50%), Gaps = 73/575 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G L++A+KVF + R N+V
Sbjct: 166 MYAKAGDLENARKVFDRILGR------------------------------------NVV 189
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW++++ G QNG+ EE + + M+ E + P+ T++SVL AC L L G+ HG +
Sbjct: 190 SWTSMLSGCLQNGFAEEGLALFNEMREERVLPSEYTMASVLMACTMLGSLHQGRWVHGSV 249
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
++G + NPF+ ++D+Y +CG+ V +AR
Sbjct: 250 IKHGMVFNPFITAAVLDMYVKCGE-------------------------------VEDAR 278
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LFD++ + ++ W +MI GY N +A +F D I P S T +VL A
Sbjct: 279 RLFDELGFVD----LVLWTTMIVGYTQNGSPLDALLLFSDKKFVH-IVPNSVTIATVLSA 333
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
A + +L G+ IHA+++ L + + V ALV+MY + + L A F I N + +
Sbjct: 334 SAQLRNLSLGRLIHAMSVKLLVIENDVVMNALVDMYAKCKALSEANGIFGRISNKDVVTW 393
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G+ N A+ LFS+M +PD ++ LSAC L + GK H YA++
Sbjct: 394 NSLIAGYVENDMGNEALMLFSQMRVQGSSPDAISIVNALSACVCLGDLLIGKCFHTYAVK 453
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
+ S+V++ TAL+++Y KC L A+ + +S + V+ AM+ Y M G I
Sbjct: 454 RAFLSNVYVNTALLNLYNKCADLPSAQRVFSEMSERNSVTWGAMIGGYGMQGDSAGSIDL 513
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLLS 479
++L +P+ + F S LS C H G + G FD MA Y+++ PS+KHY CMVD+L+
Sbjct: 514 LNKMLKDNIQPNEVVFTSILSTCSHTGMVSVGKMCFDSMAQYFNITPSMKHYACMVDVLA 573
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
RAG L EA EFI+K+PM D +WGA L GC H LEFG+ A +R++ L P+ YV+
Sbjct: 574 RAGNLEEALEFIQKMPMPADISIWGAFLHGCKLHSRLEFGEEAINRMMVLHPDKPDFYVL 633
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWI 574
++NL+ GRW R+ M++R + K PGCS +
Sbjct: 634 MSNLYTSYGRWDKSLAIRRLMQERGLVKLPGCSSV 668
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 122/459 (26%), Positives = 222/459 (48%), Gaps = 40/459 (8%)
Query: 53 DNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEP--NARTLSSVLPACARLQKL 110
+ P+ ++ +G G +A+ + M+ E + LS L A R
Sbjct: 80 ETPRPDPYTYRVALGWHAAAGRHADALALHRGMRRRCPEAHDDVVLLSLALKASVRSADF 139
Query: 111 SLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGY 170
G+ H + G ++ FV+N LVD+Y + GD+
Sbjct: 140 RYGRRLHCNAVKAGG-ADGFVMNCLVDMYAKAGDL------------------------- 173
Query: 171 CENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPT 230
EN AR++FD++ + R ++SW SM+SG + N +E ++F ++ + + P+
Sbjct: 174 -EN-----ARKVFDRI----LGRNVVSWTSMLSGCLQNGFAEEGLALFNEM-REERVLPS 222
Query: 231 SFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFD 290
+T SVL+AC + SL +G+ +H I G+ + F+ A+++MY + ++ A+ FD
Sbjct: 223 EYTMASVLMACTMLGSLHQGRWVHGSVIKHGMVFNPFITAAVLDMYVKCGEVEDARRLFD 282
Query: 291 EIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMER 350
E+ ++ +L G+ N +A+ LFS+ + + P+ T+ +LSA + L +
Sbjct: 283 ELGFVDLVLWTTMIVGYTQNGSPLDALLLFSDKKFVHIVPNSVTIATVLSASAQLRNLSL 342
Query: 351 GKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAM 410
G+ +HA +++ + + ALVDMYAKC +L A + RIS D+V+ N+++ Y
Sbjct: 343 GRLIHAMSVKLLVIENDVVMNALVDMYAKCKALSEANGIFGRISNKDVVTWNSLIAGYVE 402
Query: 411 HGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKH 470
+ G E + F ++ G PD IS ++ALSACV G + G F ++
Sbjct: 403 NDMGNEALMLFSQMRVQGSSPDAISIVNALSACVCLGDLLIGKCFHTYAVKRAFLSNVYV 462
Query: 471 YTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
T +++L ++ +L A ++ +SV WGA++GG
Sbjct: 463 NTALLNLYNKCADLPSAQRVFSEMS-ERNSVTWGAMIGG 500
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 145/325 (44%), Gaps = 13/325 (4%)
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
+L ACA + SLR +HA +A GL L+ Y DL +A+ DE +
Sbjct: 29 LLPACATLPSLRA---LHARLLAHGLLRALRARTKLLSCYAALGDLASARRVLDETPRPD 85
Query: 297 NLLGKMKEDGFEPNVYTWNAMQLFSEMLSL--DLTPDIYTVGIILSACSSLATMERGKQV 354
++ +A+ L M + D+ + + L A A G+++
Sbjct: 86 PYTYRVALGWHAAAGRHADALALHRGMRRRCPEAHDDVVLLSLALKASVRSADFRYGRRL 145
Query: 355 HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHG 414
H A++ G +D + LVDMYAK G L++AR + RI ++VS +ML+ +G
Sbjct: 146 HCNAVKAG-GADGFVMNCLVDMYAKAGDLENARKVFDRILGRNVVSWTSMLSGCLQNGFA 204
Query: 415 KEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCM 474
+EG+A F + P + S L AC GS+ G + + + + +
Sbjct: 205 EEGLALFNEMREERVLPSEYTMASVLMACTMLGSLHQGRWVHGSVIKHGMVFNPFITAAV 264
Query: 475 VDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN-LEFGQIAAD-RLIELEPN 532
+D+ + GE+ +A ++ D V+W ++ G +G+ L+ + +D + + + PN
Sbjct: 265 LDMYVKCGEVEDARRLFDELGFV-DLVLWTTMIVGYTQNGSPLDALLLFSDKKFVHIVPN 323
Query: 533 NTGNYVMLANLFAYAGRWSDLARTR 557
+ V +A + + + + +L+ R
Sbjct: 324 S----VTIATVLSASAQLRNLSLGR 344
>gi|147799847|emb|CAN66059.1| hypothetical protein VITISV_017037 [Vitis vinifera]
Length = 546
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 173/521 (33%), Positives = 276/521 (52%), Gaps = 61/521 (11%)
Query: 56 TPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKE 115
+P+ V W+ I G+++N + + RM+ P+ T S++ AC+++ + G
Sbjct: 85 SPSTVLWNTYIKGYSENYSVSLTVSLFIRMKRSDAVPDKFTYPSLIKACSKVCGVKEGVA 144
Query: 116 FHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGN 175
FHG R G + FV+ L+D+Y +CG++L A K+F + +N VS +I GY +
Sbjct: 145 FHGSAVRCGVGGDVFVMTSLIDLYGKCGEILCARKVFDEMGERNVVSWTAMIAGYASFSD 204
Query: 176 VAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFG 235
+ EAR+LFD+M ++ +SWN++ISGYV A MF ++ R+ + SFT
Sbjct: 205 LVEARKLFDEMP----EKNAVSWNAIISGYVKCGDLRSARKMFDEMPHRNVV---SFT-- 255
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
+++ Y + D+ +A+ F+E
Sbjct: 256 -----------------------------------TMIDGYAKSGDMASARFVFEEAP-- 278
Query: 296 ENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVH 355
E +V W+A+ +F ++ PD + + ++SACS + ++E K V
Sbjct: 279 ------------ERDVVAWSAL-IFRVCAEWNVKPDEFIMVSLMSACSQMGSLELAKWVD 325
Query: 356 AYAIRCGYD-SDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHG 414
Y + D H+ AL+DM AKCGS+ A ++ + DL+S +M+ ++HG G
Sbjct: 326 DYVRKSSIDVHRAHVIAALIDMNAKCGSMDRATKLFEEMPKRDLISYCSMMQGLSIHGCG 385
Query: 415 KEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTC 473
+ ++ F R+L G PD ++F L+AC AG + G +F+ M Y + PS HY C
Sbjct: 386 PQAVSLFSRMLNEGLTPDDVAFTVILTACSRAGLVDEGCYYFESMKTDYSIVPSPDHYAC 445
Query: 474 MVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNN 533
MVDLL RAG L EAYE +K +P+ P + WGALLG C H ++E G++ AD+L ELEP N
Sbjct: 446 MVDLLGRAGRLKEAYELLKSMPVEPHAGAWGALLGACKLHCDIELGEVVADQLFELEPQN 505
Query: 534 TGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWI 574
GNYV+L+N++A A +W D++ R KM++R + K PGCSWI
Sbjct: 506 AGNYVLLSNIYAAAEQWLDVSLLRNKMRERGIRKIPGCSWI 546
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 133/288 (46%), Gaps = 12/288 (4%)
Query: 230 TSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAF 289
T+ + ++L AC ++L +++HA I GL D F+ + + + F
Sbjct: 24 TTSSISTLLKACTTTSTL---EQVHARIIRKGLHQDHFLISQFLTLCNSLSNFSYTTSVF 80
Query: 290 DEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATME 349
+ + + +L G+ N + LF M D PD +T ++ ACS + ++
Sbjct: 81 NGVSSPSTVLWNTYIKGYSENYSVSLTVSLFIRMKRSDAVPDKFTYPSLIKACSKVCGVK 140
Query: 350 RGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYA 409
G H A+RCG DV + T+L+D+Y KCG + AR + + ++VS AM+ YA
Sbjct: 141 EGVAFHGSAVRCGVGGDVFVMTSLIDLYGKCGEILCARKVFDEMGERNVVSWTAMIAGYA 200
Query: 410 MHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLK 469
E R++ + +S+ + +S V G +++ + FD M + +V
Sbjct: 201 SFSDLVEA----RKLFDEMPEKNAVSWNAIISGYVKCGDLRSARKMFDEMPHRNV----V 252
Query: 470 HYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
+T M+D +++G++ A ++ P D V W AL+ + N++
Sbjct: 253 SFTTMIDGYAKSGDMASARFVFEEAP-ERDVVAWSALIFRVCAEWNVK 299
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 90/434 (20%), Positives = 173/434 (39%), Gaps = 92/434 (21%)
Query: 96 TLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKF 155
++S++L AC L ++ H I R G + F+++ + + + +F+
Sbjct: 27 SISTLLKACTTTSTL---EQVHARIIRKGLHQDHFLISQFLTLCNSLSNFSYTTSVFNGV 83
Query: 156 SIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAF 215
S + V NT I GY EN +V+ LF +M+
Sbjct: 84 SSPSTVLWNTYIKGYSENYSVSLTVSLFIRMK---------------------------- 115
Query: 216 SMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEM 275
R P FT+ S++ AC+ + +++G H A+ G+ D FV +L+++
Sbjct: 116 --------RSDAVPDKFTYPSLIKACSKVCGVKEGVAFHGSAVRCGVGGDVFVMTSLIDL 167
Query: 276 YCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAM----QLFSEMLS----LD 327
Y + +++ A+ FDE+ E NV +W AM FS+++ D
Sbjct: 168 YGKCGEILCARKVFDEMG--------------ERNVVSWTAMIAGYASFSDLVEARKLFD 213
Query: 328 LTPDIYTVG--IILSACSSLATMERGKQVHAYAIRCGYDSDVHIG----TALVDMYAKCG 381
P+ V I+S + +++ +D H T ++D YAK G
Sbjct: 214 EMPEKNAVSWNAIISGYVKCGDLRSARKM--------FDEMPHRNVVSFTTMIDGYAKSG 265
Query: 382 SLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALS 441
+ AR ++ D+V+ +A++ FR +PD +S +S
Sbjct: 266 DMASARFVFEEAPERDVVAWSALI---------------FRVCAEWNVKPDEFIMVSLMS 310
Query: 442 ACVHAGSIKTGSEFFDLMAYYDVKPSLKHY-TCMVDLLSRAGELGEAYEFIKKIPMAPDS 500
AC GS++ D + + H ++D+ ++ G + A + +++P D
Sbjct: 311 ACSQMGSLELAKWVDDYVRKSSIDVHRAHVIAALIDMNAKCGSMDRATKLFEEMP-KRDL 369
Query: 501 VMWGALLGGCVSHG 514
+ + +++ G HG
Sbjct: 370 ISYCSMMQGLSIHG 383
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 155/350 (44%), Gaps = 61/350 (17%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+YGKCG + A+KVF M ER+ VSW +++ A+ ++EA + + M N V
Sbjct: 167 LYGKCGEILCARKVFDEMGERNVVSWTAMIAGYASFSDLVEARKLFDEMPE-----KNAV 221
Query: 61 SWSAVIGGFTQNG--------YDE------------------------------EAI--- 79
SW+A+I G+ + G +DE EA
Sbjct: 222 SWNAIISGYVKCGDLRSARKMFDEMPHRNVVSFTTMIDGYAKSGDMASARFVFEEAPERD 281
Query: 80 -----GMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGF-MSNPFVV 132
++FR+ AE ++P+ + S++ AC+++ L L K Y+ ++ + V+
Sbjct: 282 VVAWSALIFRVCAEWNVKPDEFIMVSLMSACSQMGSLELAKWVDDYVRKSSIDVHRAHVI 341
Query: 133 NGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQ 192
L+D+ +CG M A K+F + ++ +S +++ G +G +A LF +M + G+
Sbjct: 342 AALIDMNAKCGSMDRATKLFEEMPKRDLISYCSMMQGLSIHGCGPQAVSLFSRMLNEGLT 401
Query: 193 RGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKE 252
+++ +++ L DE F + I P+ + ++ L KE
Sbjct: 402 PDDVAFTVILTACSRAGLVDEGCYYFESMKTDYSIVPSPDHYACMVDLLGRAGRL---KE 458
Query: 253 IHALAIALGLQSDTFVGGALV---EMYCRYQ--DLVAAQMAFDEIENIEN 297
+ L ++ ++ GAL+ +++C + ++VA Q+ E +N N
Sbjct: 459 AYELLKSMPVEPHAGAWGALLGACKLHCDIELGEVVADQLFELEPQNAGN 508
>gi|77554180|gb|ABA96976.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 780
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 193/642 (30%), Positives = 306/642 (47%), Gaps = 102/642 (15%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y CG DA++VF MPERD VSWNS+V+A
Sbjct: 164 YAACGKACDARRVFDEMPERDVVSWNSLVSA----------------------------- 194
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
F NG +A L M G N +L SV+PAC Q+ G H
Sbjct: 195 -------FLVNGMFHDARRALVSMMRSGFPLNVASLVSVVPACGTEQEEKFGLSIHALAV 247
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
+ G + + N LVD+Y + GD+ +++++F +NEVS N+ I + G +
Sbjct: 248 KVGLNTMVNLANALVDMYGKFGDVEASMQVFDGMLEQNEVSWNSAIGCFLNAGFYGDVLR 307
Query: 182 LFDQMEHLGVQRGIISWNSMISG--------------------------YVDNSLYD--- 212
+F +M V G I+ +S++ +V NSL D
Sbjct: 308 MFRKMSEHNVMPGSITLSSLLPALVELGSFDLGREVHGYSIKRAMDLDIFVANSLVDMYA 367
Query: 213 ------EAFSMFRDL--------------LMRDGIE----------------PTSFTFGS 236
+A ++F + L+++G E P S T +
Sbjct: 368 KFGSLEKASTIFEQMKDRNVVSWNAMIANLVQNGAETEAFRLVTDMQKSGECPNSITLVN 427
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
VL ACA M SL+ GK+IHA +I GL D F+ AL++MY + L A+ F+ E +
Sbjct: 428 VLPACARMASLKMGKQIHAWSIRRGLMFDLFISNALIDMYSKCGQLSLARNIFERSEK-D 486
Query: 297 NLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHA 356
++ G+ + + + ++ LF +M S+ + D + LSAC++L+ + GK++H
Sbjct: 487 DVSYNTLILGYSQSPWCFESLLLFKQMRSVGIDYDAVSFMGALSACTNLSVFKHGKEIHC 546
Query: 357 YAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKE 416
+R + +L+D+Y K G L A + +I+ D+ S N M+ Y MHG
Sbjct: 547 VLVRRLLSGHPFLSNSLLDLYTKGGMLVTASKIFNKITKKDVASWNTMILGYGMHGQIDI 606
Query: 417 GIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVD 476
F + G DH+S+++ L+AC H G + G ++F M +++P HY CMVD
Sbjct: 607 AFELFELMKGDGLDYDHVSYIAVLAACSHGGLVDKGKKYFSQMVAQNIEPQQMHYACMVD 666
Query: 477 LLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGN 536
LL RAG+L + E I+ +P +S +WGALLG C HGN+E Q AA+ L EL+P ++G
Sbjct: 667 LLGRAGQLSKCAEIIRDMPFPANSDVWGALLGACRIHGNIELAQWAAEHLFELKPEHSGY 726
Query: 537 YVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRD 578
Y ++ N++A GRW++ + R+ MK R++ K+P SW++D+D
Sbjct: 727 YTLMINMYAETGRWNEANKIRKLMKSRKVQKNPAYSWVQDQD 768
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 168/335 (50%), Gaps = 15/335 (4%)
Query: 164 NTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLM 223
NT++ Y G +AR +FD+M +R ++SWNS++S ++ N ++ +A + M
Sbjct: 158 NTLVAFYAACGKACDARRVFDEMP----ERDVVSWNSLVSAFLVNGMFHDARRALVSM-M 212
Query: 224 RDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLV 283
R G + SV+ AC + G IHALA+ +GL + + ALV+MY ++ D+
Sbjct: 213 RSGFPLNVASLVSVVPACGTEQEEKFGLSIHALAVKVGLNTMVNLANALVDMYGKFGDVE 272
Query: 284 AAQMAFD-EIENIE----NLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGII 338
A+ FD +E E + +G GF +V +++F +M ++ P T+ +
Sbjct: 273 ASMQVFDGMLEQNEVSWNSAIGCFLNAGFYGDV-----LRMFRKMSEHNVMPGSITLSSL 327
Query: 339 LSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDL 398
L A L + + G++VH Y+I+ D D+ + +LVDMYAK GSL+ A ++++ ++
Sbjct: 328 LPALVELGSFDLGREVHGYSIKRAMDLDIFVANSLVDMYAKFGSLEKASTIFEQMKDRNV 387
Query: 399 VSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDL 458
VS NAM+ +G E + SG P+ I+ ++ L AC S+K G +
Sbjct: 388 VSWNAMIANLVQNGAETEAFRLVTDMQKSGECPNSITLVNVLPACARMASLKMGKQIHAW 447
Query: 459 MAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKK 493
+ L ++D+ S+ G+L A ++
Sbjct: 448 SIRRGLMFDLFISNALIDMYSKCGQLSLARNIFER 482
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 109/428 (25%), Positives = 181/428 (42%), Gaps = 102/428 (23%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K GSL+ A +F+ M +R+ VSWN+++ NG
Sbjct: 365 MYAKFGSLEKASTIFEQMKDRNVVSWNAMIANLVQNG----------------------- 401
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+ EA ++ MQ G PN+ TL +VLPACAR+ L +GK+ H +
Sbjct: 402 -------------AETEAFRLVTDMQKSGECPNSITLVNVLPACARMASLKMGKQIHAWS 448
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R G M + F+ N L+D+Y +CG + A IF + S K++VS NT+I+GY ++ E+
Sbjct: 449 IRRGLMFDLFISNALIDMYSKCGQLSLARNIFER-SEKDDVSYNTLILGYSQSPWCFESL 507
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LF QM +G+ YD + +F L A
Sbjct: 508 LLFKQMRSVGID------------------YD------------------AVSFMGALSA 531
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C +++ + GKEIH + + L F+ +L+++Y + LV A F++I
Sbjct: 532 CTNLSVFKHGKEIHCVLVRRLLSGHPFLSNSLLDLYTKGGMLVTASKIFNKIT------- 584
Query: 301 KMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSSLA 346
+ +V +WN M +LF M L D + +L+ACS
Sbjct: 585 -------KKDVASWNTMILGYGMHGQIDIAFELFELMKGDGLDYDHVSYIAVLAACSHGG 637
Query: 347 TMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTP-DLVSQNAML 405
+++GK+ + + + +VD+ + G L + + P + A+L
Sbjct: 638 LVDKGKKYFSQMVAQNIEPQQMHYACMVDLLGRAGQLSKCAEIIRDMPFPANSDVWGALL 697
Query: 406 TAYAMHGH 413
A +HG+
Sbjct: 698 GACRIHGN 705
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 94/402 (23%), Positives = 171/402 (42%), Gaps = 20/402 (4%)
Query: 165 TIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMR 224
+++ Y ++A AR + H R WNS+ SL EA ++ +L++R
Sbjct: 54 ALLLSYAALSDLASARLVLRH--HPLRLRSAFLWNSLSRALSSASLPSEALRVY-NLMLR 110
Query: 225 DGIEP--TSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDL 282
+ P +F F A A ++ KG E+HA A+ G +D F G LV Y
Sbjct: 111 SAVRPDDRTFPFALHAAAAAVASAEDKGLELHASALRRGHLADVFTGNTLVAFYAACGKA 170
Query: 283 VAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSAC 342
A+ FDE+ + + F N +A + M+ ++ ++ ++ AC
Sbjct: 171 CDARRVFDEMPERDVVSWNSLVSAFLVNGMFHDARRALVSMMRSGFPLNVASLVSVVPAC 230
Query: 343 SSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQN 402
+ + G +HA A++ G ++ V++ ALVDMY K G ++ + + + + VS N
Sbjct: 231 GTEQEEKFGLSIHALAVKVGLNTMVNLANALVDMYGKFGDVEASMQVFDGMLEQNEVSWN 290
Query: 403 AMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYY 462
+ + + G + + FR++ P I+ S L A V GS G E Y
Sbjct: 291 SAIGCFLNAGFYGDVLRMFRKMSEHNVMPGSITLSSLLPALVELGSFDLGREVHG----Y 346
Query: 463 DVKPSLKH----YTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEF 518
+K ++ +VD+ ++ G L +A +++ + V W A++ V +G
Sbjct: 347 SIKRAMDLDIFVANSLVDMYAKFGSLEKASTIFEQMK-DRNVVSWNAMIANLVQNG---- 401
Query: 519 GQIAADRLIE--LEPNNTGNYVMLANLFAYAGRWSDLARTRQ 558
+ A RL+ + N + L N+ R + L +Q
Sbjct: 402 AETEAFRLVTDMQKSGECPNSITLVNVLPACARMASLKMGKQ 443
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 85/196 (43%), Gaps = 7/196 (3%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y K G L A K+F + ++D SWN+++ +G + A E E M D + V
Sbjct: 566 LYTKGGMLVTASKIFNKITKKDVASWNTMILGYGMHGQIDIAFELFELMKG-DGLDYDHV 624
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
S+ AV+ + G ++ +M A+ +EP + ++ R +LS E I
Sbjct: 625 SYIAVLAACSHGGLVDKGKKYFSQMVAQNIEPQQMHYACMVDLLGRAGQLSKCAEI---I 681
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDM-LSALKIFSKFSIKNEVS--CNTIIVGYCENGNVA 177
F +N V L+ R G++ L+ F +K E S +I Y E G
Sbjct: 682 RDMPFPANSDVWGALLGACRIHGNIELAQWAAEHLFELKPEHSGYYTLMINMYAETGRWN 741
Query: 178 EARELFDQMEHLGVQR 193
EA ++ M+ VQ+
Sbjct: 742 EANKIRKLMKSRKVQK 757
>gi|297604953|ref|NP_001056393.2| Os05g0574800 [Oryza sativa Japonica Group]
gi|255676596|dbj|BAF18307.2| Os05g0574800 [Oryza sativa Japonica Group]
Length = 857
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 191/601 (31%), Positives = 300/601 (49%), Gaps = 74/601 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG + A+KVF M DC+
Sbjct: 241 MYAKCGDIVAARKVFDGMAVTDCI------------------------------------ 264
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A+I G +N E + + M ++PN T++SV A L ++ KE HG+
Sbjct: 265 SWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFA 324
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ GF +DV CN++I Y G + +A
Sbjct: 325 VKRGFA---------IDV----------------------AFCNSLIQMYTSLGRMGDAG 353
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
++F +ME + +SW +MISGY N D+A ++ L+ + P T S L A
Sbjct: 354 KIFSRME----TKDAMSWTAMISGYEKNGFPDKALEVYA-LMELHNVSPDDVTIASALAA 408
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA + L G ++H LA G V AL+EMY + + + A F + + +
Sbjct: 409 CACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSW 468
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
GF N ++ A+ F ML + P+ T LSAC++ + GK++HAY +R
Sbjct: 469 SSMIAGFCFNHRSFEALYYFRYMLG-HVKPNSVTFIAALSACAATGALRSGKEIHAYVLR 527
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
CG S+ ++ AL+D+Y KCG +A + S D+VS N ML+ + HG G ++
Sbjct: 528 CGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSL 587
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLLS 479
F +++ G PD ++F++ L AC AG + G E F +M + + P+LKHY CMVDLLS
Sbjct: 588 FNQMVEMGEHPDEVTFVALLCACSRAGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLS 647
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
R G+L EAY I ++P+ PD+ +WGALL GC H ++E G++AA ++ELEPN+ +V+
Sbjct: 648 RVGKLTEAYNLINRMPIKPDAAVWGALLNGCRIHRHVELGELAAKVILELEPNDVAYHVL 707
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTI 599
L +L+ AG+W+ +AR R+ M+++ + + GCSW+E + H F D SH + +EI +
Sbjct: 708 LCDLYTDAGKWAQVARVRKTMREKGLEQDNGCSWVEVKGVTHAFLTDDESHPQIKEINVV 767
Query: 600 I 600
+
Sbjct: 768 L 768
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 122/503 (24%), Positives = 235/503 (46%), Gaps = 43/503 (8%)
Query: 27 NSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQ 86
N++++ G + A +M D + SW+ ++GG+ + G+ EEA+ + +RM
Sbjct: 135 NAMLSMLVRFGEIWHAWRVFAKMPERD-----VFSWNVMVGGYGKVGFLEEALDLYYRML 189
Query: 87 AEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDML 146
G+ P+ T VL C + +G+E H ++ R GF V+N LV +Y +C
Sbjct: 190 WAGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKC---- 245
Query: 147 SALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYV 206
G++ AR++FD M ISWN+MI+G+
Sbjct: 246 ---------------------------GDIVAARKVFDGM----AVTDCISWNAMIAGHF 274
Query: 207 DNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDT 266
+N + +F +L + ++P T SV +A ++ + KE+H A+ G D
Sbjct: 275 ENHECEAGLELFLTML-ENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAIDV 333
Query: 267 FVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSL 326
+L++MY + A F +E + + G+E N + A+++++ M
Sbjct: 334 AFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALMELH 393
Query: 327 DLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHA 386
+++PD T+ L+AC+ L ++ G ++H A G+ V + AL++MYAK + A
Sbjct: 394 NVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKA 453
Query: 387 RLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHA 446
+K ++ D+VS ++M+ + + E + +FR +L +P+ ++F++ALSAC
Sbjct: 454 IEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYMLGH-VKPNSVTFIAALSACAAT 512
Query: 447 GSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGAL 506
G++++G E + + ++DL + G+ A+ + D V W +
Sbjct: 513 GALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQF-SVHSEKDVVSWNIM 571
Query: 507 LGGCVSHGNLEFGQIAADRLIEL 529
L G V+HG + ++++E+
Sbjct: 572 LSGFVAHGLGDIALSLFNQMVEM 594
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 168/362 (46%), Gaps = 7/362 (1%)
Query: 174 GNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFT 233
G + A +F +M +R + SWN M+ GY +EA ++ +L G+ P +T
Sbjct: 145 GEIWHAWRVFAKMP----ERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWA-GMRPDVYT 199
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
F VL C + R G+E+HA + G + V ALV MY + D+VAA+ FD +
Sbjct: 200 FPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMA 259
Query: 294 NIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ 353
+ + G N ++LF ML ++ P++ T+ + A L+ + K+
Sbjct: 260 VTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKE 319
Query: 354 VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGH 413
+H +A++ G+ DV +L+ MY G + A + R+ T D +S AM++ Y +G
Sbjct: 320 MHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGF 379
Query: 414 GKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTC 473
+ + + + PD ++ SAL+AC G + G + +L +
Sbjct: 380 PDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANA 439
Query: 474 MVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG-CVSHGNLEFGQIAADRLIELEPN 532
++++ +++ + +A E K + D V W +++ G C +H + E L ++PN
Sbjct: 440 LLEMYAKSKHIDKAIEVFKFM-AEKDVVSWSSMIAGFCFNHRSFEALYYFRYMLGHVKPN 498
Query: 533 NT 534
+
Sbjct: 499 SV 500
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 112/247 (45%), Gaps = 1/247 (0%)
Query: 268 VGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLD 327
+G A++ M R+ ++ A F ++ + + G+ + A+ L+ ML
Sbjct: 133 LGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAG 192
Query: 328 LTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHAR 387
+ PD+YT +L C + G++VHA+ +R G+ +V + ALV MYAKCG + AR
Sbjct: 193 MRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAAR 252
Query: 388 LAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAG 447
+ ++ D +S NAM+ + + + G+ F +L + +P+ ++ S A
Sbjct: 253 KVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLS 312
Query: 448 SIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALL 507
+ E + ++ + + G +G+A + ++ D++ W A++
Sbjct: 313 EVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRME-TKDAMSWTAMI 371
Query: 508 GGCVSHG 514
G +G
Sbjct: 372 SGYEKNG 378
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 67/153 (43%), Gaps = 1/153 (0%)
Query: 367 VHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILA 426
+ +G A++ M + G + HA + ++ D+ S N M+ Y G +E + + R+L
Sbjct: 131 LRLGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLW 190
Query: 427 SGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGE 486
+G RPD +F L C + G E + + + +V + ++ G++
Sbjct: 191 AGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVA 250
Query: 487 AYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFG 519
A + + + D + W A++ G + E G
Sbjct: 251 ARKVFDGMAVT-DCISWNAMIAGHFENHECEAG 282
>gi|48716903|dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 755
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 190/596 (31%), Positives = 308/596 (51%), Gaps = 58/596 (9%)
Query: 7 SLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVI 66
SL DA+ +F MP RD V++N ++++ A +GLV A + D VSW+ ++
Sbjct: 115 SLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHYFDLAPEKD-----AVSWNGML 169
Query: 67 GGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFM 126
+ +NG EEA G LF + E + + ++++ + K+S +E + +
Sbjct: 170 AAYVRNGRVEEARG-LFNSRTEW---DVISWNALMSGYVQWGKMSEARELFDRMPGRDVV 225
Query: 127 SNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQM 186
S +V+G Y R GDM+ A ++F +++ + ++ GY +NG + EAR +FD M
Sbjct: 226 SWNIMVSG----YARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAM 281
Query: 187 EHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNS 246
+R +SWN+M++ Y+ + DEA +F + R+ ++ ++L A
Sbjct: 282 P----ERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRN-----VASWNTMLTGYAQAGM 332
Query: 247 LRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDG 306
L + K + Q D A++ Y + G E+
Sbjct: 333 LEEAKAVFDTMP----QKDAVSWAAMLAAYSQ---------------------GGCSEE- 366
Query: 307 FEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSD 366
+QLF EM + +LS C+ +A +E G Q+H IR GY
Sbjct: 367 ---------TLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVG 417
Query: 367 VHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILA 426
+G AL+ MY KCG+++ AR A++ + D+VS N M+ YA HG GKE + F +
Sbjct: 418 CFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRT 477
Query: 427 SGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELG 485
+ +PD I+ + L+AC H+G ++ G +F M + + V +HYTCM+DLL RAG L
Sbjct: 478 TSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLA 537
Query: 486 EAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFA 545
EA++ +K +P PDS MWGALLG H N E G+ AA+++ ELEP N G YV+L+N++A
Sbjct: 538 EAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYA 597
Query: 546 YAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
+G+W D + R M++R + K PG SWIE ++++H F A D H E+IY ++
Sbjct: 598 SSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLE 653
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 97/200 (48%), Gaps = 14/200 (7%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG+++DA+ F+ M ERD VSWN+++ A +G EALE + M + + P+ +
Sbjct: 427 MYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTK-PDDI 485
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
+ V+ + +G E+ I + M + G+ + ++ R +L+ E H
Sbjct: 486 TLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLA---EAHDL 542
Query: 120 ITRNGFMSNPFVVNGLVDVYR--RCGDM--LSALKIFSKFSIKNEVSCNTIIVG--YCEN 173
+ F + + L+ R R ++ +A KI F ++ E + +++ Y +
Sbjct: 543 MKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKI---FELEPENAGMYVLLSNIYASS 599
Query: 174 GNVAEARELFDQMEHLGVQR 193
G +AR++ ME GV++
Sbjct: 600 GKWRDARKMRVMMEERGVKK 619
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 102/527 (19%), Positives = 183/527 (34%), Gaps = 120/527 (22%)
Query: 133 NGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG------------------ 174
N + + R G + A ++F+ ++ + N ++ GY NG
Sbjct: 42 NKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIPRPDNY 101
Query: 175 -------------NVAEARELFDQME---------------------------HLGVQRG 194
++A+AR LFD+M L ++
Sbjct: 102 SYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHYFDLAPEKD 161
Query: 195 IISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIH 254
+SWN M++ YV N +EA +F D I + G V + + +E+
Sbjct: 162 AVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYV-----QWGKMSEARELF 216
Query: 255 ALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTW 314
D +V Y R D+V A+ FD + G+ N
Sbjct: 217 DRMPG----RDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLE 272
Query: 315 NAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALV 374
A ++F M + + +++A M+ K++ + C +V ++
Sbjct: 273 EARRVFDAMPERNAV----SWNAMVAAYIQRRMMDEAKELFNM-MPC---RNVASWNTML 324
Query: 375 DMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHI 434
YA+ G L+ A+ + + D VS AML AY+ G +E + F + G +
Sbjct: 325 TGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRS 384
Query: 435 SFLSALSACVHAGSIKTGSEFFD----------------LMAYY-------DVKPSLKH- 470
+F LS C +++ G + L+A Y D + + +
Sbjct: 385 AFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEM 444
Query: 471 -------YTCMVDLLSRAG---ELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE--- 517
+ M+ +R G E E ++ ++ PD + +L C G +E
Sbjct: 445 EERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGI 504
Query: 518 --FGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKD 562
F + D + +P +Y + +L AGR LA MKD
Sbjct: 505 SYFYSMHHDFGVTAKPE---HYTCMIDLLGRAGR---LAEAHDLMKD 545
>gi|357134267|ref|XP_003568739.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Brachypodium distachyon]
Length = 818
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 173/541 (31%), Positives = 302/541 (55%), Gaps = 43/541 (7%)
Query: 60 VSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
V W+ +I + Q G + + + M +G EP+ ++SS++ AC L + LG++ H
Sbjct: 212 VVWTLLITRYVQAGCASKVVELFLHMLDDGFEPDGYSMSSMISACTELGSVRLGQQLHSV 271
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
R G +S+ V GLVD+Y + +K E S + A
Sbjct: 272 ALRLGLVSDSCVSCGLVDMYAK---------------LKMERS-------------MEHA 303
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDE-AFSMFRDLLMRDGIEPTSFTFGSVL 238
R++F M + ++SW ++ISGYV + + + ++FR++L + I P T+ ++L
Sbjct: 304 RKVFKTMP----RHNVMSWTALISGYVQSGVQENNVMALFREML-NESIRPNHITYSNLL 358
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
ACA+++ G++IHA + + VG ALV MY + A+ AFD++ N+
Sbjct: 359 KACANLSDQDSGRQIHAHVLKTSIAHVNVVGNALVSMYAESGCMEEARKAFDQLYET-NI 417
Query: 299 LGKMKEDGFEPNVYT-WNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAY 357
L P+V T N S++ +D +T +LSA +S+ + +G+++HA
Sbjct: 418 LS------MSPDVETERNNASCSSKIEGMDDGVSTFTFASLLSAAASVGLLTKGQKLHAL 471
Query: 358 AIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEG 417
+++ G+ SD I +LV MYA+CG L+ A A+ + +++S ++++ A HG+ K+
Sbjct: 472 SMKAGFRSDQGISNSLVSMYARCGYLEDACRAFDEMKDHNVISWTSIISGLAKHGYAKQA 531
Query: 418 IAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVD 476
++ F ++ +G +P+ +++++ LSAC H G +K G E F M + + P ++HY C+VD
Sbjct: 532 LSMFHDMILAGVKPNDVTYIAVLSACSHVGLVKEGKEHFRSMQKDHGLLPRMEHYACIVD 591
Query: 477 LLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGN 536
LL+R+G + EA +FI ++P D+++W LL C ++GN E G+IAA+ +I LEP +
Sbjct: 592 LLARSGLVEEARQFINEMPCKADALVWKTLLSACRTYGNTEIGEIAANHVINLEPRDPAP 651
Query: 537 YVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEI 596
YV+L+NL+A AG W ++AR R M+D+ + K G SW++ + IH+FRA D SH + +I
Sbjct: 652 YVLLSNLYADAGLWDEVARIRSLMRDKNLSKETGLSWMDVGNTIHEFRAGDTSHPLAIDI 711
Query: 597 Y 597
Y
Sbjct: 712 Y 712
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 128/505 (25%), Positives = 220/505 (43%), Gaps = 79/505 (15%)
Query: 98 SSVLPACARLQKLSLGKEFHGYITRNGFM-SNPFVVNGLVDVYRRCGDMLSALKIFSKFS 156
+ +L + AR L LG+ H + R+ + ++ V N L+ +Y +C
Sbjct: 44 AKLLTSAARAGDLRLGRALHRRLLRSEILDTDAVVANSLLTMYSKC-------------- 89
Query: 157 IKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFS 216
G V AR +FDQM GV R ++SW +M S N E+
Sbjct: 90 -----------------GAVEAARRVFDQM--CGV-RDLVSWTAMASCLARNGAERESLR 129
Query: 217 MFRDLLMRDGIEPTSFTFGSVLIACADMNSLR-KGKEIHALAIALGLQ-SDTFVGGALVE 274
+ ++ G+ P +FT + AC R G + + G +D VG AL++
Sbjct: 130 LLG-EMLELGLRPNAFTLCAAARACFPQELFRLAGGVVLGFVLKTGFWGTDVSVGCALID 188
Query: 275 MYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYT 334
M+ R DLVAAQ FD + +++ + + ++LF ML PD Y+
Sbjct: 189 MFARNGDLVAAQRVFDGLIERTSVVWTLLITRYVQAGCASKVVELFLHMLDDGFEPDGYS 248
Query: 335 VGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCG---SLKHARLAYK 391
+ ++SAC+ L ++ G+Q+H+ A+R G SD + LVDMYAK S++HAR +K
Sbjct: 249 MSSMISACTELGSVRLGQQLHSVALRLGLVSDSCVSCGLVDMYAKLKMERSMEHARKVFK 308
Query: 392 RISTPDLVSQNAMLTAYAMHGHGKEGI-AHFRRILASGFRPDHISFLSALSACVHAGSIK 450
+ +++S A+++ Y G + + A FR +L RP+HI++ + L AC +
Sbjct: 309 TMPRHNVMSWTALISGYVQSGVQENNVMALFREMLNESIRPNHITYSNLLKACANLSDQD 368
Query: 451 TGSEFFDLMAYYDVKPSLKHY----TCMVDLLSRAGELGEAYEFIKK------IPMAPD- 499
+G + + +K S+ H +V + + +G + EA + + + M+PD
Sbjct: 369 SGRQIH----AHVLKTSIAHVNVVGNALVSMYAESGCMEEARKAFDQLYETNILSMSPDV 424
Query: 500 ---------------------SVMWGALLGGCVSHGNLEFGQ-IAADRLIELEPNNTGNY 537
+ + +LL S G L GQ + A + ++ G
Sbjct: 425 ETERNNASCSSKIEGMDDGVSTFTFASLLSAAASVGLLTKGQKLHALSMKAGFRSDQGIS 484
Query: 538 VMLANLFAYAGRWSDLARTRQKMKD 562
L +++A G D R +MKD
Sbjct: 485 NSLVSMYARCGYLEDACRAFDEMKD 509
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 122/296 (41%), Gaps = 77/296 (26%)
Query: 29 VVTACAANGLV-----LEALECLERMSSLDNETP--NLVSWSAVIGGFTQNGYDEEAIGM 81
V +C + GLV L+ +E + P N++SW+A+I G+ Q+G E +
Sbjct: 278 VSDSCVSCGLVDMYAKLKMERSMEHARKVFKTMPRHNVMSWTALISGYVQSGVQENNVMA 337
Query: 82 LFR-MQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYR 140
LFR M E + PN T S++L ACA L G++ H ++ + V N LV +Y
Sbjct: 338 LFREMLNESIRPNHITYSNLLKACANLSDQDSGRQIHAHVLKTSIAHVNVVGNALVSMYA 397
Query: 141 RCGDMLSALKIFSKF-------------SIKNEVSCNTIIVG------------------ 169
G M A K F + + +N SC++ I G
Sbjct: 398 ESGCMEEARKAFDQLYETNILSMSPDVETERNNASCSSKIEGMDDGVSTFTFASLLSAAA 457
Query: 170 ---------------------------------YCENGNVAEARELFDQMEHLGVQRGII 196
Y G + +A FD+M+ +I
Sbjct: 458 SVGLLTKGQKLHALSMKAGFRSDQGISNSLVSMYARCGYLEDACRAFDEMK----DHNVI 513
Query: 197 SWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKE 252
SW S+ISG + +A SMF D+++ G++P T+ +VL AC+ + +++GKE
Sbjct: 514 SWTSIISGLAKHGYAKQALSMFHDMILA-GVKPNDVTYIAVLSACSHVGLVKEGKE 568
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 100/259 (38%), Gaps = 40/259 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +CG L+DA + F M + N++
Sbjct: 490 MYARCGYLEDACRAFDEMKDH------------------------------------NVI 513
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKE-FHGY 119
SW+++I G ++GY ++A+ M M G++PN T +VL AC+ + + GKE F
Sbjct: 514 SWTSIISGLAKHGYAKQALSMFHDMILAGVKPNDVTYIAVLSACSHVGLVKEGKEHFRSM 573
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+G + +VD+ R G + A + ++ K + ++ C E
Sbjct: 574 QKDHGLLPRMEHYACIVDLLARSGLVEEARQFINEMPCKADALVWKTLLSACRTYGNTEI 633
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
E+ R + + + Y D L+DE + LMRD + T S +
Sbjct: 634 GEIAANHVINLEPRDPAPYVLLSNLYADAGLWDEVARIRS--LMRDK-NLSKETGLSWMD 690
Query: 240 ACADMNSLRKGKEIHALAI 258
++ R G H LAI
Sbjct: 691 VGNTIHEFRAGDTSHPLAI 709
>gi|297742226|emb|CBI34375.3| unnamed protein product [Vitis vinifera]
Length = 814
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 189/600 (31%), Positives = 297/600 (49%), Gaps = 80/600 (13%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +CGS DA K+F M E P++V
Sbjct: 263 MYSRCGSKSDAIKMFDEMTE------------------------------------PDVV 286
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEG-LEPNARTLSSVLPACARLQKLSLGKEFHGY 119
SW+ IG YD LFR+ G +E N L +VL A + L G++ G
Sbjct: 287 SWTERIGA----AYDAIEAFELFRLVLSGNMEVNEYMLINVLSAMREPKLLKSGRQIQGL 342
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ G++ V N L+ +Y +CG+M++A IF + + VS N++I GY ENG + +A
Sbjct: 343 CQKAGYLLVASVNNALIFMYGKCGEMVAARHIFDEMLCGDSVSWNSLIAGYAENGLMKQA 402
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
++F QM RD L+ +P +T S+L
Sbjct: 403 LKVFSQM--------------------------------RDYLL----QPNKYTLASILE 426
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL- 298
A+ N + +IH+ + LG D + L+ Y + + ++ + +I I L
Sbjct: 427 VAANSNFPEQAMQIHSYIVKLGFIVDDSMLSCLITAYGKCNMICESKRVYSDISQINVLH 486
Query: 299 LGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYA 358
L M + +A++LF L D T+ I+L AC +L +E G+ +H+ A
Sbjct: 487 LNAMAATLVHAGCHA-DALKLFQTGWRLHQEVDCITLSIVLKACGALTDLEYGRNIHSMA 545
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGI 418
++ G D + +A++D+Y KCG++ A + +S +LV+ NAM+ YA HG E
Sbjct: 546 LKSGMSQDNFVESAVIDVYCKCGTVDEAAKTFMNVSKNNLVAWNAMVMGYAQHGCYHEVF 605
Query: 419 AHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFF-DLMAYYDVKPSLKHYTCMVDL 477
F ++L G +PD I++L L++C HAG + + ++ + V P L+HY CM+DL
Sbjct: 606 ELFNKMLELGIQPDEITYLGVLNSCCHAGLVNEAHTYLSSMLELHGVVPCLEHYACMIDL 665
Query: 478 LSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNY 537
R G L +A I ++P+ PD+ +W LL GC HGN++ G++AA +LIEL+P N Y
Sbjct: 666 FGRVGLLEDAKRTIDQMPIMPDAQIWQILLSGCNIHGNVDLGEVAAKKLIELQPENDSAY 725
Query: 538 VMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
V+L+NL+A AGRW+ + + R+ MK + + K PG SWI+ R +H F ASD SH S+EIY
Sbjct: 726 VLLSNLYASAGRWNAVGKLRRVMKKKIICKEPGSSWIQVRGSVHYFFASDTSHPESKEIY 785
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 102/409 (24%), Positives = 182/409 (44%), Gaps = 70/409 (17%)
Query: 52 LDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLS 111
LD P+ VSW+++I G+ + + ++ GL P+ +LSS++ C L++
Sbjct: 79 LDTPYPDTVSWNSLISGYARFRQPGPVFDLFNGLRRSGLSPDEFSLSSLVKGCGVLEQNE 138
Query: 112 LGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYC 171
+ HG + G + N FVV+GL+D Y + GD+ SA K F +F I + V
Sbjct: 139 VA---HGVCLKMGLL-NGFVVSGLLDGYAKLGDVDSAEKCFKEFYIADSVV--------- 185
Query: 172 ENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLL-MRDGIEPT 230
W +M+ G+V N +++ +F ++ + G+E
Sbjct: 186 --------------------------WTAMVCGFVWNGEFEKGREVFVEMRGLGLGLELN 219
Query: 231 SFTFGSVLIACADMNSLRKGKEIHALAIALGL--QSDTFVGGALVEMYCRYQDLVAAQMA 288
F+ SVL A +D +R+G+++ L++ +GL + AL+ MY R A
Sbjct: 220 EFSLTSVLGALSD---VREGEQVFGLSVKMGLLCGCSIHLNNALMNMYSRCGSKSDAIKM 276
Query: 289 FDEIENIENLLGKMKEDGFEPNVYTWN-----------AMQLFSEMLSLDLTPDIYTVGI 337
FDE+ EP+V +W A +LF +LS ++ + Y +
Sbjct: 277 FDEMT--------------EPDVVSWTERIGAAYDAIEAFELFRLVLSGNMEVNEYMLIN 322
Query: 338 ILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPD 397
+LSA ++ G+Q+ + GY + AL+ MY KCG + AR + + D
Sbjct: 323 VLSAMREPKLLKSGRQIQGLCQKAGYLLVASVNNALIFMYGKCGEMVAARHIFDEMLCGD 382
Query: 398 LVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHA 446
VS N+++ YA +G K+ + F ++ +P+ + S L ++
Sbjct: 383 SVSWNSLIAGYAENGLMKQALKVFSQMRDYLLQPNKYTLASILEVAANS 431
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 80/190 (42%), Gaps = 21/190 (11%)
Query: 339 LSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDL 398
L A +SL Q +A ++ G+ D + + +V+ +A G AR PD
Sbjct: 27 LRASASLLHPPLTDQSYALFLKSGFALDAFLSSFIVNRFAISGDFARARRFLLDTPYPDT 86
Query: 399 VSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSAC--------VHAGSIK 450
VS N++++ YA F + SG PD S S + C H +K
Sbjct: 87 VSWNSLISGYARFRQPGPVFDLFNGLRRSGLSPDEFSLSSLVKGCGVLEQNEVAHGVCLK 146
Query: 451 TGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGC 510
G L+ + V L Y ++ G++ A + K+ +A DSV+W A++ G
Sbjct: 147 MG-----LLNGFVVSGLLDGY-------AKLGDVDSAEKCFKEFYIA-DSVVWTAMVCGF 193
Query: 511 VSHGNLEFGQ 520
V +G E G+
Sbjct: 194 VWNGEFEKGR 203
>gi|255539110|ref|XP_002510620.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551321|gb|EEF52807.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 708
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 187/601 (31%), Positives = 306/601 (50%), Gaps = 73/601 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G L +A++VF MPER+ V+W ++++ A L EA E E M
Sbjct: 155 MYCKAGLLFEAREVFDRMPERNEVTWATMISGYAIQRLAGEAFEVFELMRR--------- 205
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+EE + N +SVL A A + + GK+ H
Sbjct: 206 --------------EEEDV-------------NEFAFTSVLSALAVPEFVDSGKQIHCLA 238
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G + ++N LV +Y +CG + +L++F + KN ++ + +I GY ++G+ +A
Sbjct: 239 VKTGLLVFLSILNALVTMYAKCGSLDDSLQVFEMSNDKNSITWSAMITGYAQSGDSHKAL 298
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+LF +M H GI P+ FT VL A
Sbjct: 299 KLFSRM-HFA-----------------------------------GINPSEFTLVGVLNA 322
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C+D ++ +GK++H + LG +S ++ ALV+MY + A+ F+ ++ + +L
Sbjct: 323 CSDACAVEEGKQVHNYLLKLGFESQLYIMTALVDMYAKSGVTEDARKGFNYLQQPDLVLW 382
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G+ N +A+ L+ M + P+ T+ +L ACS+LA ++G+Q+HA I+
Sbjct: 383 TSMIAGYVQNGENEDALSLYCRMQMEGILPNELTMASVLKACSNLAAFDQGRQIHARTIK 442
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
G +V IG+AL MYAKCG+L+ + ++R+ D++S NAM++ + +G+GKE +
Sbjct: 443 YGLGLEVTIGSALSTMYAKCGNLEEGNIVFRRMPERDIISWNAMISGLSQNGYGKEALEL 502
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMVDLLS 479
F + +PD ++F++ LSAC H G + +G +F +M + + P ++HY CMVD+LS
Sbjct: 503 FEEMRQQDTKPDDVTFVNVLSACSHMGLVDSGWLYFRMMFDEFGLLPKVEHYACMVDVLS 562
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
RAG+L EA EFI+ + +W LLG C ++ N E G A ++L+EL + YV+
Sbjct: 563 RAGKLYEAKEFIESTTIDHGLCLWRILLGACRNYRNYELGAYAGEKLMELGSQESSAYVL 622
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTI 599
L+ ++ GR D+ R R MK R + K PGCSWIE + +H F D+ H EI T
Sbjct: 623 LSGIYTALGRPEDVERVRSMMKVRGVSKEPGCSWIELKSNVHVFVVGDQMHPCIGEIRTE 682
Query: 600 I 600
I
Sbjct: 683 I 683
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 178/355 (50%), Gaps = 6/355 (1%)
Query: 164 NTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLM 223
N++I Y + ++ +A+ +FD++ + + +ISWN +I+GY +F M M
Sbjct: 47 NSLINFYAKCCHLPKAKLVFDRIHN----KDVISWNCLINGYSQQGPTGSSFVMELFQRM 102
Query: 224 R-DGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDL 282
R D I P + TF + A ++++S+ G++ HA+AI + D FVG +L+ MYC+ L
Sbjct: 103 RADNILPNAHTFSGIFTAASNLSSIFFGQQAHAVAIKMACFYDVFVGSSLLNMYCKAGLL 162
Query: 283 VAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSAC 342
A+ FD + + G+ A ++F M + + + +LSA
Sbjct: 163 FEAREVFDRMPERNEVTWATMISGYAIQRLAGEAFEVFELMRREEEDVNEFAFTSVLSAL 222
Query: 343 SSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQN 402
+ ++ GKQ+H A++ G + I ALV MYAKCGSL + ++ + + ++ +
Sbjct: 223 AVPEFVDSGKQIHCLAVKTGLLVFLSILNALVTMYAKCGSLDDSLQVFEMSNDKNSITWS 282
Query: 403 AMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYY 462
AM+T YA G + + F R+ +G P + + L+AC A +++ G + + +
Sbjct: 283 AMITGYAQSGDSHKALKLFSRMHFAGINPSEFTLVGVLNACSDACAVEEGKQVHNYLLKL 342
Query: 463 DVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
+ L T +VD+ +++G +A + + PD V+W +++ G V +G E
Sbjct: 343 GFESQLYIMTALVDMYAKSGVTEDARKGFNYLQQ-PDLVLWTSMIAGYVQNGENE 396
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 139/292 (47%), Gaps = 4/292 (1%)
Query: 227 IEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSD-TFVGGALVEMYCRYQDLVAA 285
+ P + + + L+ SL+KG+ +HA I L S ++ +L+ Y + L A
Sbjct: 3 LHPQNLSSFNSLVQFTHQKSLQKGRALHAQIIKLASSSSCIYLANSLINFYAKCCHLPKA 62
Query: 286 QMAFDEIENIENLLGKMKEDGFEPNVYTWNA--MQLFSEMLSLDLTPDIYTVGIILSACS 343
++ FD I N + + +G+ T ++ M+LF M + ++ P+ +T I +A S
Sbjct: 63 KLVFDRIHNKDVISWNCLINGYSQQGPTGSSFVMELFQRMRADNILPNAHTFSGIFTAAS 122
Query: 344 SLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNA 403
+L+++ G+Q HA AI+ DV +G++L++MY K G L AR + R+ + V+
Sbjct: 123 NLSSIFFGQQAHAVAIKMACFYDVFVGSSLLNMYCKAGLLFEAREVFDRMPERNEVTWAT 182
Query: 404 MLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYD 463
M++ YA+ E F + + +F S LSA + +G + L
Sbjct: 183 MISGYAIQRLAGEAFEVFELMRREEEDVNEFAFTSVLSALAVPEFVDSGKQIHCLAVKTG 242
Query: 464 VKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
+ L +V + ++ G L ++ + + ++ +S+ W A++ G G+
Sbjct: 243 LLVFLSILNALVTMYAKCGSLDDSLQ-VFEMSNDKNSITWSAMITGYAQSGD 293
>gi|242092246|ref|XP_002436613.1| hypothetical protein SORBIDRAFT_10g005800 [Sorghum bicolor]
gi|241914836|gb|EER87980.1| hypothetical protein SORBIDRAFT_10g005800 [Sorghum bicolor]
Length = 683
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 185/575 (32%), Positives = 287/575 (49%), Gaps = 73/575 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G L+ A+KVF+ +P R N+V
Sbjct: 176 MYAKAGDLECARKVFERIPGR------------------------------------NVV 199
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW++++ G QNG+ + + + +M+ + + P+ T+++V+ AC+ L L G+ HG +
Sbjct: 200 SWTSMLSGCVQNGFAADGLLLFNKMRQDNVPPSEYTIATVITACSALIGLHQGRWMHGSV 259
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G MSN F+ L+D+Y +CG++ A +F + S + V T+IVGY +NGN +A
Sbjct: 260 IKQGLMSNSFISAALLDMYVKCGELEDAQCVFDELSYIDLVLWTTMIVGYTQNGNPLDAL 319
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LF D+ F+ I P S T +VL A
Sbjct: 320 RLF---------------------------LDKKFA---------NIVPNSVTIATVLSA 343
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
A + L G+ IH +A+ LGL T V ALV+MY + Q + A F I N + +
Sbjct: 344 SAQLRDLSLGRSIHGIAVKLGLVEYTVVVNALVDMYAKCQAVSEANRIFGSISNKDVVAW 403
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G+ N +A+ LF +M +PD +V LSA L + GK H YA++
Sbjct: 404 NSMLSGYAENNMCNDALMLFKQMSLKGPSPDAISVVHALSASVCLGDLLIGKSFHGYAVK 463
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
+ S++++ TAL+++Y KCG L AR + ++ + V+ AM+ Y M G I
Sbjct: 464 HAFLSNIYVSTALLNLYNKCGDLPSARRVFDEMNDRNSVTWCAMIGGYGMQGDSAGSIDL 523
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLLS 479
F +L G P+ ++F S LS C H G + +FD MA ++++ PS+KHY CMVD+L+
Sbjct: 524 FGEMLKDGVHPNDVAFTSILSTCSHTGMVTAAKRYFDSMAQHFNITPSMKHYACMVDVLA 583
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
RAG L EA EFI +PM D+ +WGA L GC H L+FG+ A R++ L P YV+
Sbjct: 584 RAGNLEEALEFIDNMPMQADTSVWGAFLHGCELHSRLQFGEEAIKRMMVLHPERPDLYVL 643
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWI 574
++NL+ G W R+ M+++ + K PG S I
Sbjct: 644 ISNLYTSNGMWEKSQAIRRWMQEKGLVKLPGYSSI 678
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 127/465 (27%), Positives = 220/465 (47%), Gaps = 41/465 (8%)
Query: 48 RMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNAR---TLSSVLPAC 104
RM P+ S+ ++ Q EA+ + M+ P A+ LS L AC
Sbjct: 84 RMVFDGTPRPDAYSYGVMLWCLVQAERHAEAVALHQDMRRRRPCPEAQDDFVLSLALKAC 143
Query: 105 ARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCN 164
R G H + G ++ FV+N LVD+Y + GD+ C
Sbjct: 144 IRSADYGYGTRLHCDAVKVGG-ADGFVMNSLVDMYAKAGDL----------------EC- 185
Query: 165 TIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMR 224
AR++F+++ R ++SW SM+SG V N + +F + +
Sbjct: 186 --------------ARKVFERIP----GRNVVSWTSMLSGCVQNGFAADGLLLFNKM-RQ 226
Query: 225 DGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVA 284
D + P+ +T +V+ AC+ + L +G+ +H I GL S++F+ AL++MY + +L
Sbjct: 227 DNVPPSEYTIATVITACSALIGLHQGRWMHGSVIKQGLMSNSFISAALLDMYVKCGELED 286
Query: 285 AQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSS 344
AQ FDE+ I+ +L G+ N +A++LF + ++ P+ T+ +LSA +
Sbjct: 287 AQCVFDELSYIDLVLWTTMIVGYTQNGNPLDALRLFLDKKFANIVPNSVTIATVLSASAQ 346
Query: 345 LATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAM 404
L + G+ +H A++ G + ALVDMYAKC ++ A + IS D+V+ N+M
Sbjct: 347 LRDLSLGRSIHGIAVKLGLVEYTVVVNALVDMYAKCQAVSEANRIFGSISNKDVVAWNSM 406
Query: 405 LTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDV 464
L+ YA + + + F+++ G PD IS + ALSA V G + G F +
Sbjct: 407 LSGYAENNMCNDALMLFKQMSLKGPSPDAISVVHALSASVCLGDLLIGKSFHGYAVKHAF 466
Query: 465 KPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
++ T +++L ++ G+L A ++ +SV W A++GG
Sbjct: 467 LSNIYVSTALLNLYNKCGDLPSARRVFDEMN-DRNSVTWCAMIGG 510
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 149/344 (43%), Gaps = 47/344 (13%)
Query: 237 VLIACADMNSLRKGKE---IHALAIALG-LQSDTFVGGALVEMYCRYQDLVAAQMAFDEI 292
+L +C + SLR H + LG L++ T L+ Y DL +A+M FD
Sbjct: 35 LLPSCGTLPSLRVLHARLLTHTQGLLLGSLRART----KLLSCYAALGDLASARMVFD-- 88
Query: 293 ENIENLLGKMKEDGFEPNVYTW---------NAMQLFSEMLSLDLTP---DIYTVGIILS 340
G + D + V W A+ L +M P D + + + L
Sbjct: 89 -------GTPRPDAYSYGVMLWCLVQAERHAEAVALHQDMRRRRPCPEAQDDFVLSLALK 141
Query: 341 ACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVS 400
AC A G ++H A++ G +D + +LVDMYAK G L+ AR ++RI ++VS
Sbjct: 142 ACIRSADYGYGTRLHCDAVKVG-GADGFVMNSLVDMYAKAGDLECARKVFERIPGRNVVS 200
Query: 401 QNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSAC-----VHAGSIKTGSEF 455
+ML+ +G +G+ F ++ P + + ++AC +H G GS
Sbjct: 201 WTSMLSGCVQNGFAADGLLLFNKMRQDNVPPSEYTIATVITACSALIGLHQGRWMHGSVI 260
Query: 456 FD-LMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
LM+ + +L +D+ + GEL +A ++ D V+W ++ G +G
Sbjct: 261 KQGLMSNSFISAAL------LDMYVKCGELEDAQCVFDELSYI-DLVLWTTMIVGYTQNG 313
Query: 515 N-LEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTR 557
N L+ ++ D+ N N V +A + + + + DL+ R
Sbjct: 314 NPLDALRLFLDKKFA---NIVPNSVTIATVLSASAQLRDLSLGR 354
>gi|359492337|ref|XP_002284789.2| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Vitis vinifera]
Length = 694
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 161/439 (36%), Positives = 259/439 (58%), Gaps = 5/439 (1%)
Query: 164 NTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLM 223
+ ++ Y + G +A+ LFD+M + + ++SWNS++SG + F +
Sbjct: 158 DRLVSMYFKLGYDEDAQRLFDEMPN----KDLVSWNSLMSGLSGRGYLGACLNAFCRMRT 213
Query: 224 RDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLV 283
G +P T SV+ ACADM +L +GK +H + + LG+ V +L+ MY + L
Sbjct: 214 ESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLD 273
Query: 284 AAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACS 343
AA F+E+ + N Y M LF+ M + PD T+ +L AC+
Sbjct: 274 AASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACT 333
Query: 344 SLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNA 403
+ + +HAY RCG+++D+ I TAL+++YAK G L + ++ I D ++ A
Sbjct: 334 DTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTA 393
Query: 404 MLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YY 462
ML YA+H G+E I F ++ G DH++F LSAC H+G ++ G ++F++M+ Y
Sbjct: 394 MLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVY 453
Query: 463 DVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIA 522
V+P L HY+CMVDLL R+G L +AYE IK +PM P S +WGALLG C +GN+E G+
Sbjct: 454 RVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEV 513
Query: 523 ADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHK 582
A++L+ L+P++ NY+ML+N+++ AG W D ++ R MK+RR+ ++PGCS+IE ++IH+
Sbjct: 514 AEQLLSLDPSDHRNYIMLSNIYSAAGLWRDASKVRALMKERRLTRNPGCSFIEHGNKIHR 573
Query: 583 FRASDRSHDRSEEIYTIID 601
F D+ H RS+EI+T ++
Sbjct: 574 FVVGDQLHPRSDEIHTKLE 592
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 173/380 (45%), Gaps = 48/380 (12%)
Query: 47 ERMSSLDNETPN--LVSWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPA 103
E L +E PN LVSW++++ G + GY + RM+ E G +PN TL SV+ A
Sbjct: 171 EDAQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSA 230
Query: 104 CARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSC 163
CA + L GK HG + + G VVN L+++Y + G + +A ++F + +++ VS
Sbjct: 231 CADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSW 290
Query: 164 NTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLM 223
N+++V + NG + +LF +L+
Sbjct: 291 NSMVVIHNHNGYAEKGMDLF------------------------------------NLMK 314
Query: 224 RDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLV 283
R GI P T ++L AC D R+ + IHA G +D + AL+ +Y + L
Sbjct: 315 RAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLN 374
Query: 284 AAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACS 343
A++ F+EI++ + + G+ + A++LF M+ + D T +LSACS
Sbjct: 375 ASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACS 434
Query: 344 SLATMERGK---QVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST-PDLV 399
+E GK ++ + R D + + +VD+ + G L+ A K + P
Sbjct: 435 HSGLVEEGKKYFEIMSEVYRVEPRLDHY--SCMVDLLGRSGRLEDAYELIKSMPMEPSSG 492
Query: 400 SQNAMLTAYAMHGH---GKE 416
A+L A ++G+ GKE
Sbjct: 493 VWGALLGACRVYGNVELGKE 512
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 123/280 (43%), Gaps = 2/280 (0%)
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
S++ A + S+ IHA I SD F+G LV MY + AQ FDE+ N
Sbjct: 124 SLVFAISSCTSVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNK 183
Query: 296 ENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLD-LTPDIYTVGIILSACSSLATMERGKQV 354
+ + G Y + F M + P+ T+ ++SAC+ + ++ GK +
Sbjct: 184 DLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSL 243
Query: 355 HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHG 414
H ++ G + +L++MY K G L A ++ + LVS N+M+ + +G+
Sbjct: 244 HGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYA 303
Query: 415 KEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCM 474
++G+ F + +G PD + ++ L AC G + + + T +
Sbjct: 304 EKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATAL 363
Query: 475 VDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
++L ++ G L + + ++I D + W A+L G H
Sbjct: 364 LNLYAKLGRLNASEDIFEEIK-DRDRIAWTAMLAGYAVHA 402
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 84/358 (23%), Positives = 145/358 (40%), Gaps = 98/358 (27%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNS-------------------------------- 28
MY K G +DA+++F MP +D VSWNS
Sbjct: 163 MYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEV 222
Query: 29 ----VVTACAANGLVLEA----------------------------LECLERMSSLDNET 56
VV+ACA G + E L L+ S L E
Sbjct: 223 TLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEM 282
Query: 57 P--NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGK 114
P +LVSW++++ NGY E+ + + M+ G+ P+ T+ ++L AC +
Sbjct: 283 PVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAE 342
Query: 115 EFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
H YI R GF ++ + L+++Y + G + ++ IF + ++ ++ ++ GY +
Sbjct: 343 SIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHA 402
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEA-------------------F 215
EA +LFD M GV+ +++ ++S + L +E +
Sbjct: 403 CGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHY 462
Query: 216 SMFRDLLMRDG-------------IEPTSFTFGSVLIACADMNSLRKGKEIHALAIAL 260
S DLL R G +EP+S +G++L AC ++ GKE+ ++L
Sbjct: 463 SCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLSL 520
>gi|50080253|gb|AAT69588.1| hypothetical protein [Oryza sativa Japonica Group]
gi|222632650|gb|EEE64782.1| hypothetical protein OsJ_19638 [Oryza sativa Japonica Group]
Length = 870
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 191/601 (31%), Positives = 300/601 (49%), Gaps = 74/601 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG + A+KVF M DC+
Sbjct: 241 MYAKCGDIVAARKVFDGMAVTDCI------------------------------------ 264
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A+I G +N E + + M ++PN T++SV A L ++ KE HG+
Sbjct: 265 SWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFA 324
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ GF +DV CN++I Y G + +A
Sbjct: 325 VKRGFA---------IDV----------------------AFCNSLIQMYTSLGRMGDAG 353
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
++F +ME + +SW +MISGY N D+A ++ L+ + P T S L A
Sbjct: 354 KIFSRME----TKDAMSWTAMISGYEKNGFPDKALEVYA-LMELHNVSPDDVTIASALAA 408
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA + L G ++H LA G V AL+EMY + + + A F + + +
Sbjct: 409 CACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSW 468
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
GF N ++ A+ F ML + P+ T LSAC++ + GK++HAY +R
Sbjct: 469 SSMIAGFCFNHRSFEALYYFRYMLG-HVKPNSVTFIAALSACAATGALRSGKEIHAYVLR 527
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
CG S+ ++ AL+D+Y KCG +A + S D+VS N ML+ + HG G ++
Sbjct: 528 CGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSL 587
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLLS 479
F +++ G PD ++F++ L AC AG + G E F +M + + P+LKHY CMVDLLS
Sbjct: 588 FNQMVEMGEHPDEVTFVALLCACSRAGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLS 647
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
R G+L EAY I ++P+ PD+ +WGALL GC H ++E G++AA ++ELEPN+ +V+
Sbjct: 648 RVGKLTEAYNLINRMPIKPDAAVWGALLNGCRIHRHVELGELAAKVILELEPNDVAYHVL 707
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTI 599
L +L+ AG+W+ +AR R+ M+++ + + GCSW+E + H F D SH + +EI +
Sbjct: 708 LCDLYTDAGKWAQVARVRKTMREKGLEQDNGCSWVEVKGVTHAFLTDDESHPQIKEINVV 767
Query: 600 I 600
+
Sbjct: 768 L 768
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 122/503 (24%), Positives = 235/503 (46%), Gaps = 43/503 (8%)
Query: 27 NSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQ 86
N++++ G + A +M D + SW+ ++GG+ + G+ EEA+ + +RM
Sbjct: 135 NAMLSMLVRFGEIWHAWRVFAKMPERD-----VFSWNVMVGGYGKVGFLEEALDLYYRML 189
Query: 87 AEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDML 146
G+ P+ T VL C + +G+E H ++ R GF V+N LV +Y +CG
Sbjct: 190 WAGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCG--- 246
Query: 147 SALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYV 206
++ AR++FD M ISWN+MI+G+
Sbjct: 247 ----------------------------DIVAARKVFDGM----AVTDCISWNAMIAGHF 274
Query: 207 DNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDT 266
+N + +F +L + ++P T SV +A ++ + KE+H A+ G D
Sbjct: 275 ENHECEAGLELFLTML-ENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAIDV 333
Query: 267 FVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSL 326
+L++MY + A F +E + + G+E N + A+++++ M
Sbjct: 334 AFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALMELH 393
Query: 327 DLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHA 386
+++PD T+ L+AC+ L ++ G ++H A G+ V + AL++MYAK + A
Sbjct: 394 NVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKA 453
Query: 387 RLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHA 446
+K ++ D+VS ++M+ + + E + +FR +L +P+ ++F++ALSAC
Sbjct: 454 IEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYMLGH-VKPNSVTFIAALSACAAT 512
Query: 447 GSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGAL 506
G++++G E + + ++DL + G+ A+ + D V W +
Sbjct: 513 GALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQF-SVHSEKDVVSWNIM 571
Query: 507 LGGCVSHGNLEFGQIAADRLIEL 529
L G V+HG + ++++E+
Sbjct: 572 LSGFVAHGLGDIALSLFNQMVEM 594
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 168/362 (46%), Gaps = 7/362 (1%)
Query: 174 GNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFT 233
G + A +F +M +R + SWN M+ GY +EA ++ +L G+ P +T
Sbjct: 145 GEIWHAWRVFAKMP----ERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWA-GMRPDVYT 199
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
F VL C + R G+E+HA + G + V ALV MY + D+VAA+ FD +
Sbjct: 200 FPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMA 259
Query: 294 NIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ 353
+ + G N ++LF ML ++ P++ T+ + A L+ + K+
Sbjct: 260 VTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKE 319
Query: 354 VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGH 413
+H +A++ G+ DV +L+ MY G + A + R+ T D +S AM++ Y +G
Sbjct: 320 MHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGF 379
Query: 414 GKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTC 473
+ + + + PD ++ SAL+AC G + G + +L +
Sbjct: 380 PDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANA 439
Query: 474 MVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG-CVSHGNLEFGQIAADRLIELEPN 532
++++ +++ + +A E K + D V W +++ G C +H + E L ++PN
Sbjct: 440 LLEMYAKSKHIDKAIEVFKFM-AEKDVVSWSSMIAGFCFNHRSFEALYYFRYMLGHVKPN 498
Query: 533 NT 534
+
Sbjct: 499 SV 500
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 112/247 (45%), Gaps = 1/247 (0%)
Query: 268 VGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLD 327
+G A++ M R+ ++ A F ++ + + G+ + A+ L+ ML
Sbjct: 133 LGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAG 192
Query: 328 LTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHAR 387
+ PD+YT +L C + G++VHA+ +R G+ +V + ALV MYAKCG + AR
Sbjct: 193 MRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAAR 252
Query: 388 LAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAG 447
+ ++ D +S NAM+ + + + G+ F +L + +P+ ++ S A
Sbjct: 253 KVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLS 312
Query: 448 SIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALL 507
+ E + ++ + + G +G+A + ++ D++ W A++
Sbjct: 313 EVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRME-TKDAMSWTAMI 371
Query: 508 GGCVSHG 514
G +G
Sbjct: 372 SGYEKNG 378
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 67/153 (43%), Gaps = 1/153 (0%)
Query: 367 VHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILA 426
+ +G A++ M + G + HA + ++ D+ S N M+ Y G +E + + R+L
Sbjct: 131 LRLGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLW 190
Query: 427 SGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGE 486
+G RPD +F L C + G E + + + +V + ++ G++
Sbjct: 191 AGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVA 250
Query: 487 AYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFG 519
A + + + D + W A++ G + E G
Sbjct: 251 ARKVFDGMAVT-DCISWNAMIAGHFENHECEAG 282
>gi|359481513|ref|XP_003632631.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Vitis vinifera]
Length = 755
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 182/584 (31%), Positives = 302/584 (51%), Gaps = 56/584 (9%)
Query: 24 VSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLF 83
++ N++++ + L+++AL+ RM++ D L+SW ++I GF+Q GY+ EA+
Sbjct: 200 IAQNALISMYTKSNLIIDALDVFSRMATRD-----LISWGSMIAGFSQLGYELEALCYFK 254
Query: 84 RMQAEGLE-PNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRC 142
M +G+ PN SV AC+ L + G++ HG + G + F L D+Y +C
Sbjct: 255 EMLHQGVYLPNEFIFGSVFSACSSLLQPEYGRQLHGMSIKFGLGRDVFAGCSLCDMYAKC 314
Query: 143 GDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMI 202
G + SC AR +F Q+ + +++WN++I
Sbjct: 315 GLL----------------SC---------------ARVVFYQIG----RPDLVAWNAII 339
Query: 203 SGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGL 262
+G+ EA + F + G+ P T S+L AC + L +G ++H +GL
Sbjct: 340 AGFAYGGDAKEAIAFFSQM-RHQGLIPDEITVRSLLCACTSPSELYQGMQVHGYINKMGL 398
Query: 263 QSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL-------GKMKEDGFEPNVYTWN 315
D V L+ MY + +L A F+E+ +L+ M+ D E
Sbjct: 399 DLDVPVCNTLLTMYAKCSELRDAIFFFEEMRCNADLVSWNAILTACMRHDQAE------E 452
Query: 316 AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVD 375
+L M PD T+ +L A + ++E G QVH YA++ G + D + L+D
Sbjct: 453 VFRLLKLMCISQHRPDYITLTNVLGASAETVSIEIGNQVHCYALKTGLNCDTSVTNGLID 512
Query: 376 MYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHIS 435
+YAKCGSLK A + + PD+VS ++++ YA G+G+E + F+ + +P+H++
Sbjct: 513 LYAKCGSLKTAHKIFDSMINPDVVSWSSLILGYAQFGYGEEALKLFKTMRRLDVKPNHVT 572
Query: 436 FLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKI 494
F+ L+AC H G ++ G + + M + + P+ +H +CMVDLL+RAG L EA FI ++
Sbjct: 573 FVGVLTACSHVGLVEEGWKLYGTMEKEFGIAPTREHCSCMVDLLARAGCLNEAEGFIHQM 632
Query: 495 PMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLA 554
PD V+W LL C +HGN++ G+ AA+ +++++P+N+ +V+L N++A G W D+A
Sbjct: 633 AFDPDIVVWKTLLAACKTHGNVDVGKRAAENILKIDPSNSAAHVLLCNIYASKGNWEDVA 692
Query: 555 RTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYT 598
R R MK R + K PG SWIE +D IH F D H +IYT
Sbjct: 693 RLRSLMKQRGVRKVPGQSWIEVKDRIHVFFVEDSLHPERNKIYT 736
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 156/544 (28%), Positives = 253/544 (46%), Gaps = 89/544 (16%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKC SL DA+KVF MPER N+V
Sbjct: 107 MYGKCKSLKDAQKVFDAMPER------------------------------------NVV 130
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW++VI G++QNG A+ F+M G+ P+ T S++ AC+ L + LG++ H ++
Sbjct: 131 SWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHV 190
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
++ F ++ N L+ +Y + ++ AL +FS+ + ++ +S ++I G+ + G EA
Sbjct: 191 LKSEFGAHIIAQNALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEAL 250
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
F +M H GV Y+ P F FGSV A
Sbjct: 251 CYFKEMLHQGV-------------YL----------------------PNEFIFGSVFSA 275
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C+ + G+++H ++I GL D F G +L +MY + L A++ F +I + +
Sbjct: 276 CSSLLQPEYGRQLHGMSIKFGLGRDVFAGCSLCDMYAKCGLLSCARVVFYQIGRPDLVAW 335
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
GF A+ FS+M L PD TV +L AC+S + + +G QVH Y +
Sbjct: 336 NAIIAGFAYGGDAKEAIAFFSQMRHQGLIPDEITVRSLLCACTSPSELYQGMQVHGYINK 395
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRI-STPDLVSQNAMLTAYAMHGHGKEGIA 419
G D DV + L+ MYAKC L+ A ++ + DLVS NA+LTA H +E
Sbjct: 396 MGLDLDVPVCNTLLTMYAKCSELRDAIFFFEEMRCNADLVSWNAILTACMRHDQAEEVFR 455
Query: 420 HFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTC----MV 475
+ + S RPD+I+ + L A SI+ G++ + Y +K L T ++
Sbjct: 456 LLKLMCISQHRPDYITLTNVLGASAETVSIEIGNQ----VHCYALKTGLNCDTSVTNGLI 511
Query: 476 DLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAAD-----RLIELE 530
DL ++ G L A++ + + PD V W +L+ G G +G+ A R ++++
Sbjct: 512 DLYAKCGSLKTAHKIFDSM-INPDVVSWSSLILGYAQFG---YGEEALKLFKTMRRLDVK 567
Query: 531 PNNT 534
PN+
Sbjct: 568 PNHV 571
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 124/477 (25%), Positives = 217/477 (45%), Gaps = 43/477 (9%)
Query: 71 QNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPF 130
Q ++E F + G T + ++ AC+ L+ L GK+ H ++ ++ +
Sbjct: 40 QKLFNEAIKAFEFLQKKTGFCLTLSTYAYLISACSYLRSLEHGKKIHDHMLKSKSHPDLT 99
Query: 131 VVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLG 190
+ N ++++Y +C + +A+++FD M
Sbjct: 100 LQNHILNMYGKCKSL-------------------------------KDAQKVFDAMP--- 125
Query: 191 VQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKG 250
+R ++SW S+I+GY N A + +L + G+ P FTFGS++ AC+ + + G
Sbjct: 126 -ERNVVSWTSVIAGYSQNGQGGNALEFYFQML-QSGVMPDQFTFGSIIKACSSLGDIGLG 183
Query: 251 KEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPN 310
+++HA + + AL+ MY + ++ A F + + + GF
Sbjct: 184 RQLHAHVLKSEFGAHIIAQNALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQL 243
Query: 311 VYTWNAMQLFSEMLSLDL-TPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHI 369
Y A+ F EML + P+ + G + SACSSL E G+Q+H +I+ G DV
Sbjct: 244 GYELEALCYFKEMLHQGVYLPNEFIFGSVFSACSSLLQPEYGRQLHGMSIKFGLGRDVFA 303
Query: 370 GTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGF 429
G +L DMYAKCG L AR+ + +I PDLV+ NA++ +A G KE IA F ++ G
Sbjct: 304 GCSLCDMYAKCGLLSCARVVFYQIGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGL 363
Query: 430 RPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYE 489
PD I+ S L AC + G + + + + ++ + ++ EL +A
Sbjct: 364 IPDEITVRSLLCACTSPSELYQGMQVHGYINKMGLDLDVPVCNTLLTMYAKCSELRDAIF 423
Query: 490 FIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELE--PNNTGNYVMLANLF 544
F +++ D V W A+L C+ H E RL++L + +Y+ L N+
Sbjct: 424 FFEEMRCNADLVSWNAILTACMRHDQAE----EVFRLLKLMCISQHRPDYITLTNVL 476
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 147/314 (46%), Gaps = 2/314 (0%)
Query: 197 SWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHAL 256
S N I+ L++EA F L + G T T+ ++ AC+ + SL GK+IH
Sbjct: 29 SSNEYITSLCKQKLFNEAIKAFEFLQKKTGFCLTLSTYAYLISACSYLRSLEHGKKIHDH 88
Query: 257 AIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNA 316
+ D + ++ MY + + L AQ FD + + G+ N NA
Sbjct: 89 MLKSKSHPDLTLQNHILNMYGKCKSLKDAQKVFDAMPERNVVSWTSVIAGYSQNGQGGNA 148
Query: 317 MQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDM 376
++ + +ML + PD +T G I+ ACSSL + G+Q+HA+ ++ + + + AL+ M
Sbjct: 149 LEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNALISM 208
Query: 377 YAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASG-FRPDHIS 435
Y K + A + R++T DL+S +M+ ++ G+ E + +F+ +L G + P+
Sbjct: 209 YTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVYLPNEFI 268
Query: 436 FLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIP 495
F S SAC + G + + + + + + D+ ++ G L A +I
Sbjct: 269 FGSVFSACSSLLQPEYGRQLHGMSIKFGLGRDVFAGCSLCDMYAKCGLLSCARVVFYQIG 328
Query: 496 MAPDSVMWGALLGG 509
PD V W A++ G
Sbjct: 329 -RPDLVAWNAIIAG 341
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 103/231 (44%), Gaps = 37/231 (16%)
Query: 1 MYGKCGSLDDAKKVFK-MMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNL 59
MY KC L DA F+ M D VSWN+++TAC + E L+ M
Sbjct: 411 MYAKCSELRDAIFFFEEMRCNADLVSWNAILTACMRHDQAEEVFRLLKLMC--------- 461
Query: 60 VSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
+Q+ P+ TL++VL A A + +G + H Y
Sbjct: 462 ---------ISQH------------------RPDYITLTNVLGASAETVSIEIGNQVHCY 494
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ G + V NGL+D+Y +CG + +A KIF + VS +++I+GY + G EA
Sbjct: 495 ALKTGLNCDTSVTNGLIDLYAKCGSLKTAHKIFDSMINPDVVSWSSLILGYAQFGYGEEA 554
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPT 230
+LF M L V+ +++ +++ L +E + ++ + GI PT
Sbjct: 555 LKLFKTMRRLDVKPNHVTFVGVLTACSHVGLVEEGWKLYGTMEKEFGIAPT 605
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 92/203 (45%), Gaps = 20/203 (9%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KCGSL A K+F M D VSW+S++ A G EAL+ + M LD + PN V
Sbjct: 513 LYAKCGSLKTAHKIFDSMINPDVVSWSSLILGYAQFGYGEEALKLFKTMRRLDVK-PNHV 571
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
++ V+ + G EE + M+ E G+ P S ++ AR L+ E G+
Sbjct: 572 TFVGVLTACSHVGLVEEGWKLYGTMEKEFGIAPTREHCSCMVDLLARAGCLN---EAEGF 628
Query: 120 ITRNGFMSNPFV---------VNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGY 170
I + F + V +G VDV +R + + LKI S + + CN Y
Sbjct: 629 IHQMAFDPDIVVWKTLLAACKTHGNVDVGKRAAE--NILKIDPSNSAAHVLLCNI----Y 682
Query: 171 CENGNVAEARELFDQMEHLGVQR 193
GN + L M+ GV++
Sbjct: 683 ASKGNWEDVARLRSLMKQRGVRK 705
>gi|297607519|ref|NP_001060096.2| Os07g0578800 [Oryza sativa Japonica Group]
gi|255677918|dbj|BAF22010.2| Os07g0578800 [Oryza sativa Japonica Group]
Length = 967
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 175/545 (32%), Positives = 290/545 (53%), Gaps = 21/545 (3%)
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNAR---TLSSVLPACARLQKLSLGKEFH 117
SW+ I G AI + +M+A + P + +L + L +CA L +L H
Sbjct: 331 SWAYQIRMAASQGQFLHAISLFLQMRAS-VAPRSSVPASLPAALKSCAGLGLCTLAASLH 389
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
R+G ++ F N L+++ C + F E G E+
Sbjct: 390 ALAIRSGSFADRFTANALLNL---CIKLPGFHHPFGTNGPSGE--------GGLESAAYE 438
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
R++FD+M ++R +SWN++I G ++ + EA SM R++ RDG P +FT +V
Sbjct: 439 SMRKVFDEM----LERDAVSWNTLILGCAEHKRHQEALSMVREM-WRDGFMPDTFTLSTV 493
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
L A+ +++G +H AI G +D FVG +L++MY + + FD + +
Sbjct: 494 LPIFAECADIKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDA 553
Query: 298 LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAY 357
+L G+ N A+ +F ML + P T ++ A +L+ + GKQ+HAY
Sbjct: 554 VLWNSMLAGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAY 613
Query: 358 AIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEG 417
IR ++ ++ I ++L+DMY KCG++ AR + I +PD+VS AM+ YA+HG E
Sbjct: 614 LIRARFNDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEA 673
Query: 418 IAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVD 476
F R+ +P+HI+FL+ L+AC HAG + G ++F+ M+ Y PSL+H + D
Sbjct: 674 FVLFERMELGNVKPNHITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAALAD 733
Query: 477 LLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGN 536
L RAG+L EAY FI ++ + P S +W LL C H N + A ++ ELEP + G+
Sbjct: 734 TLGRAGDLDEAYNFISEMKIKPTSSVWSTLLRACRVHKNTVLAEEVAKKIFELEPKSMGS 793
Query: 537 YVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEI 596
+V+L+N+++ +GRW++ A+ R+ M+ + M K P CSWIE ++++H F A D+SH + I
Sbjct: 794 HVILSNMYSASGRWNEAAQLRKSMRIKGMKKEPACSWIEVKNKLHVFIAHDKSHPWYDRI 853
Query: 597 YTIID 601
++
Sbjct: 854 IDALN 858
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 156/328 (47%), Gaps = 37/328 (11%)
Query: 60 VSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
VSW+ +I G ++ +EA+ M+ M +G P+ TLS+VLP A + G HGY
Sbjct: 453 VSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMVVHGY 512
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+NGF ++ FV + L+D+Y C M ++K+F FS + V N+++ GY +NG+V EA
Sbjct: 513 AIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQNGSVEEA 572
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
+F +M GV+ P TF S++
Sbjct: 573 LGIFRRMLQAGVR------------------------------------PVPVTFSSLIP 596
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
A +++ LR GK++HA I + F+ +L++MYC+ ++ A+ F+ I++ + +
Sbjct: 597 AFGNLSLLRLGKQLHAYLIRARFNDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVS 656
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG-KQVHAYA 358
G+ + T A LF M ++ P+ T +L+ACS ++ G K ++ +
Sbjct: 657 WTAMIMGYALHGPTTEAFVLFERMELGNVKPNHITFLAVLTACSHAGLVDNGWKYFNSMS 716
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHA 386
+ G+ + AL D + G L A
Sbjct: 717 NQYGFVPSLEHCAALADTLGRAGDLDEA 744
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 104/230 (45%), Gaps = 36/230 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY C +D + KVF + D V WNS++ A NG V EAL
Sbjct: 531 MYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQNGSVEEAL----------------- 573
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
G+ RM G+ P T SS++PA L L LGK+ H Y+
Sbjct: 574 -------------------GIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYL 614
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R F N F+ + L+D+Y +CG++ A ++F+ + VS +I+GY +G EA
Sbjct: 615 IRARFNDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAF 674
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPT 230
LF++ME V+ I++ ++++ L D + F + + G P+
Sbjct: 675 VLFERMELGNVKPNHITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPS 724
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 78/194 (40%), Gaps = 50/194 (25%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG++D A++VF + D VSW +++ A +G EA ERM L N PN +
Sbjct: 632 MYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERM-ELGNVKPNHI 690
Query: 61 SWSAVI-----GGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKE 115
++ AV+ G NG+ K
Sbjct: 691 TFLAVLTACSHAGLVDNGW---------------------------------------KY 711
Query: 116 FHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYC---E 172
F+ + GF+ + L D R GD+ A S+ IK S + ++ C +
Sbjct: 712 FNSMSNQYGFVPSLEHCAALADTLGRAGDLDEAYNFISEMKIKPTSSVWSTLLRACRVHK 771
Query: 173 NGNVAE--ARELFD 184
N +AE A+++F+
Sbjct: 772 NTVLAEEVAKKIFE 785
>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930 [Vitis vinifera]
Length = 724
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 183/581 (31%), Positives = 290/581 (49%), Gaps = 76/581 (13%)
Query: 57 PNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEF 116
PN W+ +I G+++ G A+ M M G+ P+ T +L R + G+E
Sbjct: 82 PNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCGREL 141
Query: 117 HGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNV 176
H +I + GF SN FV N L+ +Y G++ A +F + S + V+ N +I GY +
Sbjct: 142 HDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQF 201
Query: 177 AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGS 236
E+ +LFD+ME + V P+S T S
Sbjct: 202 DESMKLFDEMERMRVL------------------------------------PSSITLVS 225
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIEN-- 294
VL AC+ + L GK +H L ++ + AL++MY D+ A FD +++
Sbjct: 226 VLSACSKLKDLNVGKRVHRYVKDLKIEPVRVLENALIDMYAACGDMDTALGIFDNMKSRD 285
Query: 295 -------------------IENLLGKMKEDGFEPNVYTWNAM--------------QLFS 321
N KM E F +W AM LF
Sbjct: 286 VISWTAIVTGFTNLGQVGLARNYFDKMPERDF----VSWTAMIDGYLQVNRFKEVLSLFR 341
Query: 322 EMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCG 381
EM + ++ PD +T+ IL+AC+ L +E G+ + AY + D +G AL+DMY CG
Sbjct: 342 EMQAANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKNEIKIDSFVGNALIDMYFNCG 401
Query: 382 SLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALS 441
+++ A + + D +S A++ A++G+G+E + F ++L + PD ++ + L
Sbjct: 402 NVEKAIRIFNAMPHRDKISWTAVIFGLAINGYGEEALDMFSQMLKASITPDEVTCIGVLC 461
Query: 442 ACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDS 500
AC H+G + G +FF M + ++P++ HY CMVDLL RAG L EA+E IK +P+ P+S
Sbjct: 462 ACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGCMVDLLGRAGHLKEAHEVIKNMPVKPNS 521
Query: 501 VMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKM 560
++WG+LLG C H + E ++AA +++ELEP N YV+L N++A RW L R+ M
Sbjct: 522 IVWGSLLGACRVHRDEEMAEMAAQQILELEPENGAVYVLLCNIYAACNRWEKLHEVRKLM 581
Query: 561 KDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
DR + K+PGCS IE +H+F A D+ H +S+EIY+ +D
Sbjct: 582 MDRGIKKTPGCSLIEMNGSVHEFVAGDQVHPQSKEIYSKLD 622
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 146/296 (49%), Gaps = 8/296 (2%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY CG +D A +F M RD +SW ++VT G V A ++M D V
Sbjct: 264 MYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERD-----FV 318
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A+I G+ Q +E + + MQA ++P+ T+ S+L ACA L L LG+ YI
Sbjct: 319 SWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKAYI 378
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+N + FV N L+D+Y CG++ A++IF+ ++++S +I G NG EA
Sbjct: 379 DKNEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGYGEEAL 438
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
++F QM + ++ ++ + + D+ F + + GIEP +G ++
Sbjct: 439 DMFSQMLKASITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGCMVDL 498
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
L KE H + + ++ ++ V G+L+ ++D A+MA +I +E
Sbjct: 499 LGRAGHL---KEAHEVIKNMPVKPNSIVWGSLLGACRVHRDEEMAEMAAQQILELE 551
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 134/295 (45%), Gaps = 6/295 (2%)
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQ--DLVAAQMAFDEIE 293
S++ C M L K+IH+ I GL S+ V ++ C+++ D+ A+M FD +
Sbjct: 24 SLIKTCKSMAQL---KQIHSQTICTGLISNPIVPAQIIAFCCKHELGDMEYARMVFDTMP 80
Query: 294 NIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ 353
+ + G+ +A+ ++ EML + PD YT +L + ++ G++
Sbjct: 81 GPNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCGRE 140
Query: 354 VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGH 413
+H + ++ G+ S+V + AL+ +Y+ G + AR + R S D+V+ N M++ Y
Sbjct: 141 LHDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQ 200
Query: 414 GKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTC 473
E + F + P I+ +S LSAC + G + ++P
Sbjct: 201 FDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVLENA 260
Query: 474 MVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIE 528
++D+ + G++ A + + D + W A++ G + G + + D++ E
Sbjct: 261 LIDMYAACGDMDTALGIFDNMK-SRDVISWTAIVTGFTNLGQVGLARNYFDKMPE 314
>gi|302814190|ref|XP_002988779.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
gi|300143350|gb|EFJ10041.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
Length = 796
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 183/599 (30%), Positives = 301/599 (50%), Gaps = 76/599 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGSL+DAK++F+ M R VS
Sbjct: 166 MYAKCGSLEDAKRLFERMSGRRSVS----------------------------------- 190
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A+I + Q+G+ EEAI + M +EP+ RT +SVL AC+ L L G++ H I
Sbjct: 191 SWNAMIAAYAQSGHFEEAIRLYEDMD---VEPSVRTFTSVLSACSNLGLLDQGRKIHALI 247
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G + + N L+ +Y RC + A KIF +
Sbjct: 248 SSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLP------------------------ 283
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+R ++SW++MI+ + + L+DEA + + + +G+ P +TF SVL+A
Sbjct: 284 -----------RRDVVSWSAMIAAFAETDLFDEAIEFYSKMQL-EGVRPNYYTFASVLLA 331
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA + LR G+ +H + G + G ALV++Y Y L A+ FD+IEN + L
Sbjct: 332 CASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLW 391
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTV-GIILSACSSLATMERGKQVHAYAI 359
+ G+ + ++L+ EM + P + ++SAC+SL +Q H+
Sbjct: 392 TVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQAHSDIE 451
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
G SD + T+LV+MY++ G+L+ AR + ++S+ D ++ ++ YA HG +
Sbjct: 452 ADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALG 511
Query: 420 HFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFF-DLMAYYDVKPSLKHYTCMVDLL 478
++ + G P ++F+ L AC HAG + G + F + + Y + P++ HY+C++DLL
Sbjct: 512 LYKEMELEGAEPSELTFMVVLYACSHAGLQEQGKQLFISIQSDYAMHPNIAHYSCIIDLL 571
Query: 479 SRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYV 538
SRAG L +A E I +P+ P+ V W +LLG H +++ AA ++ +L+P + +YV
Sbjct: 572 SRAGRLSDAEELINAMPVEPNDVTWSSLLGASRIHKDVKRATHAAGQITKLDPVDPASYV 631
Query: 539 MLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
+L+N+ A G + +A R M R + K G SWIE D+IH+F D SH R +EI+
Sbjct: 632 LLSNVHAVTGNLAGMASVRNTMVARGVKKRRGSSWIEVADQIHEFNVGDNSHPRFQEIF 690
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 114/425 (26%), Positives = 194/425 (45%), Gaps = 66/425 (15%)
Query: 103 ACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVS 162
A + Q L ++ H I+ +N F+ N +V Y +CG + SA F + KN+ S
Sbjct: 33 ALRQCQDLESVRQIHDRIS-GAASANVFLGNEIVRAYGKCGSVASARVAFDAIARKNDYS 91
Query: 163 CNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLL 222
+++ Y +NG+ A +L+ +M+
Sbjct: 92 WGSMLTAYAQNGHYRAALDLYKRMD----------------------------------- 116
Query: 223 MRDGIEPTSFTFGSVLIACADMNSLRKGKEIHA-LAIALGLQSDTFVGGALVEMYCRYQD 281
++P + +VL ACA + +L +GK IH+ ++ GL+ D + +L+ MY +
Sbjct: 117 ----LQPNPVVYTTVLGACASIEALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGS 172
Query: 282 LVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQL-------FSEMLSL----DLTP 330
L A+ F E + G+ +V +WNAM F E + L D+ P
Sbjct: 173 LEDAKRLF------ERMSGRR-------SVSSWNAMIAAYAQSGHFEEAIRLYEDMDVEP 219
Query: 331 DIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAY 390
+ T +LSACS+L +++G+++HA G + D+ + AL+ MYA+C L A +
Sbjct: 220 SVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIF 279
Query: 391 KRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIK 450
+R+ D+VS +AM+ A+A E I + ++ G RP++ +F S L AC G ++
Sbjct: 280 QRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLR 339
Query: 451 TGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGC 510
G D + K +L + T +VDL + G L EA +I D +W L+GG
Sbjct: 340 AGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIE-NRDEGLWTVLIGGY 398
Query: 511 VSHGN 515
G+
Sbjct: 399 SKQGH 403
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 137/282 (48%), Gaps = 13/282 (4%)
Query: 230 TSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAF 289
+S + L C D+ S+R +IH I+ ++ F+G +V Y + + +A++AF
Sbjct: 26 SSGHYRDALRQCQDLESVR---QIHD-RISGAASANVFLGNEIVRAYGKCGSVASARVAF 81
Query: 290 DEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATME 349
D I + + N + A+ L+ M DL P+ +L AC+S+ +E
Sbjct: 82 DAIARKNDYSWGSMLTAYAQNGHYRAALDLYKRM---DLQPNPVVYTTVLGACASIEALE 138
Query: 350 RGKQVHA-YAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQ-NAMLTA 407
GK +H+ + G DV + +L+ MYAKCGSL+ A+ ++R+S VS NAM+ A
Sbjct: 139 EGKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRRSVSSWNAMIAA 198
Query: 408 YAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPS 467
YA GH +E I + + P +F S LSAC + G + G + L++ +
Sbjct: 199 YAQSGHFEEAIRLYEDM---DVEPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELD 255
Query: 468 LKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
L ++ + +R L +A + +++P D V W A++
Sbjct: 256 LSLQNALLTMYARCKCLDDAAKIFQRLPR-RDVVSWSAMIAA 296
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 82/171 (47%), Gaps = 5/171 (2%)
Query: 348 MERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTA 407
+E +Q+H I ++V +G +V Y KCGS+ AR+A+ I+ + S +MLTA
Sbjct: 40 LESVRQIHDR-ISGAASANVFLGNEIVRAYGKCGSVASARVAFDAIARKNDYSWGSMLTA 98
Query: 408 YAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKP 466
YA +GH + + ++R+ +P+ + + + L AC +++ G ++ +K
Sbjct: 99 YAQNGHYRAALDLYKRM---DLQPNPVVYTTVLGACASIEALEEGKAIHSRISGTKGLKL 155
Query: 467 SLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
+ ++ + ++ G L +A +++ W A++ G+ E
Sbjct: 156 DVILENSLLTMYAKCGSLEDAKRLFERMSGRRSVSSWNAMIAAYAQSGHFE 206
>gi|302141697|emb|CBI18900.3| unnamed protein product [Vitis vinifera]
Length = 637
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 161/439 (36%), Positives = 259/439 (58%), Gaps = 5/439 (1%)
Query: 164 NTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLM 223
+ ++ Y + G +A+ LFD+M + + ++SWNS++SG + F +
Sbjct: 101 DRLVSMYFKLGYDEDAQRLFDEMPN----KDLVSWNSLMSGLSGRGYLGACLNAFCRMRT 156
Query: 224 RDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLV 283
G +P T SV+ ACADM +L +GK +H + + LG+ V +L+ MY + L
Sbjct: 157 ESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLD 216
Query: 284 AAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACS 343
AA F+E+ + N Y M LF+ M + PD T+ +L AC+
Sbjct: 217 AASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACT 276
Query: 344 SLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNA 403
+ + +HAY RCG+++D+ I TAL+++YAK G L + ++ I D ++ A
Sbjct: 277 DTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTA 336
Query: 404 MLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YY 462
ML YA+H G+E I F ++ G DH++F LSAC H+G ++ G ++F++M+ Y
Sbjct: 337 MLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVY 396
Query: 463 DVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIA 522
V+P L HY+CMVDLL R+G L +AYE IK +PM P S +WGALLG C +GN+E G+
Sbjct: 397 RVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEV 456
Query: 523 ADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHK 582
A++L+ L+P++ NY+ML+N+++ AG W D ++ R MK+RR+ ++PGCS+IE ++IH+
Sbjct: 457 AEQLLSLDPSDHRNYIMLSNIYSAAGLWRDASKVRALMKERRLTRNPGCSFIEHGNKIHR 516
Query: 583 FRASDRSHDRSEEIYTIID 601
F D+ H RS+EI+T ++
Sbjct: 517 FVVGDQLHPRSDEIHTKLE 535
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 144/310 (46%), Gaps = 39/310 (12%)
Query: 47 ERMSSLDNETPN--LVSWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPA 103
E L +E PN LVSW++++ G + GY + RM+ E G +PN TL SV+ A
Sbjct: 114 EDAQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSA 173
Query: 104 CARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSC 163
CA + L GK HG + + G VVN L+++Y + G + +A ++F + +++ VS
Sbjct: 174 CADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSW 233
Query: 164 NTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLM 223
N+++V + NG + +LF+ M+
Sbjct: 234 NSMVVIHNHNGYAEKGMDLFNLMK------------------------------------ 257
Query: 224 RDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLV 283
R GI P T ++L AC D R+ + IHA G +D + AL+ +Y + L
Sbjct: 258 RAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLN 317
Query: 284 AAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACS 343
A++ F+EI++ + + G+ + A++LF M+ + D T +LSACS
Sbjct: 318 ASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACS 377
Query: 344 SLATMERGKQ 353
+E GK+
Sbjct: 378 HSGLVEEGKK 387
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 123/280 (43%), Gaps = 2/280 (0%)
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
S++ A + S+ IHA I SD F+G LV MY + AQ FDE+ N
Sbjct: 67 SLVFAISSCTSVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNK 126
Query: 296 ENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLD-LTPDIYTVGIILSACSSLATMERGKQV 354
+ + G Y + F M + P+ T+ ++SAC+ + ++ GK +
Sbjct: 127 DLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSL 186
Query: 355 HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHG 414
H ++ G + +L++MY K G L A ++ + LVS N+M+ + +G+
Sbjct: 187 HGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYA 246
Query: 415 KEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCM 474
++G+ F + +G PD + ++ L AC G + + + T +
Sbjct: 247 EKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATAL 306
Query: 475 VDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
++L ++ G L + + ++I D + W A+L G H
Sbjct: 307 LNLYAKLGRLNASEDIFEEIK-DRDRIAWTAMLAGYAVHA 345
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 142/351 (40%), Gaps = 98/351 (27%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNS-------------------------------- 28
MY K G +DA+++F MP +D VSWNS
Sbjct: 106 MYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEV 165
Query: 29 ----VVTACAANGLVLEA----------------------------LECLERMSSLDNET 56
VV+ACA G + E L L+ S L E
Sbjct: 166 TLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEM 225
Query: 57 P--NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGK 114
P +LVSW++++ NGY E+ + + M+ G+ P+ T+ ++L AC +
Sbjct: 226 PVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAE 285
Query: 115 EFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
H YI R GF ++ + L+++Y + G + ++ IF + ++ ++ ++ GY +
Sbjct: 286 SIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHA 345
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEA-------------------F 215
EA +LFD M GV+ +++ ++S + L +E +
Sbjct: 346 CGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHY 405
Query: 216 SMFRDLLMRDG-------------IEPTSFTFGSVLIACADMNSLRKGKEI 253
S DLL R G +EP+S +G++L AC ++ GKE+
Sbjct: 406 SCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEV 456
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 87/186 (46%), Gaps = 5/186 (2%)
Query: 326 LDLTPDIYTVGIILS---ACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGS 382
L+P I+ S A SS ++ +HA I+ SD IG LV MY K G
Sbjct: 53 FQLSPPFQVYSIVQSLVFAISSCTSVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGY 112
Query: 383 LKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILA-SGFRPDHISFLSALS 441
+ A+ + + DLVS N++++ + G+ + F R+ SG +P+ ++ LS +S
Sbjct: 113 DEDAQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVS 172
Query: 442 ACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSV 501
AC G++ G ++ + K ++++ + G L A + +++P+ V
Sbjct: 173 ACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVR-SLV 231
Query: 502 MWGALL 507
W +++
Sbjct: 232 SWNSMV 237
>gi|238478502|ref|NP_173097.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332191338|gb|AEE29459.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 937
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 181/593 (30%), Positives = 308/593 (51%), Gaps = 75/593 (12%)
Query: 27 NSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQ 86
N+++ A G +EA ++M T +L+SW++++ F +G +A+G+L M
Sbjct: 300 NTLLRMYAGAGRSVEANLVFKQMP-----TKDLISWNSLMASFVNDGRSLDALGLLCSMI 354
Query: 87 AEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDML 146
+ G N T +S L AC G+ HG + +G N + N LV +Y + G+M
Sbjct: 355 SSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEM- 413
Query: 147 SALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYV 206
+E+R + QM +R +++WN++I GY
Sbjct: 414 ------------------------------SESRRVLLQMP----RRDVVAWNALIGGYA 439
Query: 207 DNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC---ADMNSLRKGKEIHALAIALGLQ 263
++ D+A + F+ + + +G+ T SVL AC D+ L +GK +HA ++ G +
Sbjct: 440 EDEDPDKALAAFQTMRV-EGVSSNYITVVSVLSACLLPGDL--LERGKPLHAYIVSAGFE 496
Query: 264 SDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAM------ 317
SD V +L+ MY + DL ++Q F+ ++N N+ TWNAM
Sbjct: 497 SDEHVKNSLITMYAKCGDLSSSQDLFNGLDN--------------RNIITWNAMLAANAH 542
Query: 318 --------QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHI 369
+L S+M S ++ D ++ LSA + LA +E G+Q+H A++ G++ D I
Sbjct: 543 HGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFI 602
Query: 370 GTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGF 429
A DMY+KCG + L S N +++A HG+ +E A F +L G
Sbjct: 603 FNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGI 662
Query: 430 RPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAY 488
+P H++F+S L+AC H G + G ++D++A + ++P+++H C++DLL R+G L EA
Sbjct: 663 KPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAE 722
Query: 489 EFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAG 548
FI K+PM P+ ++W +LL C HGNL+ G+ AA+ L +LEP + YV+ +N+FA G
Sbjct: 723 TFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTG 782
Query: 549 RWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
RW D+ R++M + + K CSW++ +D++ F DR+H ++ EIY ++
Sbjct: 783 RWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLE 835
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 153/594 (25%), Positives = 253/594 (42%), Gaps = 125/594 (21%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+YG G + ++KVF+ MP+R N+V
Sbjct: 103 LYGVYGLVSCSRKVFEEMPDR------------------------------------NVV 126
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW++++ G++ G EE I + M+ EG+ N ++S V+ +C L+ SLG++ G +
Sbjct: 127 SWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQV 186
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
++G S V N L+ + G++ A IF + S ++ +S N+I Y +NG++ E+
Sbjct: 187 VKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESF 246
Query: 181 ELFDQME--HLGVQRGIIS-------------WNSMISGYVDNSLYD------------- 212
+F M H V +S W I G V +D
Sbjct: 247 RIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMY 306
Query: 213 -------EAFSMFRDLLMRDGIEPTSF------------------------------TFG 235
EA +F+ + +D I S TF
Sbjct: 307 AGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFT 366
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDL-----VAAQMAFD 290
S L AC + KG+ +H L + GL + +G ALV MY + ++ V QM
Sbjct: 367 SALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRR 426
Query: 291 EIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLA-TME 349
++ L+G ED +P+ A+ F M ++ + TV +LSAC +E
Sbjct: 427 DVVAWNALIGGYAEDE-DPD----KALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLE 481
Query: 350 RGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYA 409
RGK +HAY + G++SD H+ +L+ MYAKCG L ++ + + ++++ NAML A A
Sbjct: 482 RGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANA 541
Query: 410 MHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLK 469
HGHG+E + ++ + G D SF LSA ++ G + L VK +
Sbjct: 542 HHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLA----VKLGFE 597
Query: 470 H----YTCMVDLLSRAGELGEAYEFIKKIPMAPDSVM--WGALLGGCVSHGNLE 517
H + D+ S+ GE+GE +K +P + + + W L+ HG E
Sbjct: 598 HDSFIFNAAADMYSKCGEIGEV---VKMLPPSVNRSLPSWNILISALGRHGYFE 648
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 110/511 (21%), Positives = 220/511 (43%), Gaps = 76/511 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G + A+ +F +MP R N V
Sbjct: 1 MYTKFGRVKPARHLFDIMPVR------------------------------------NEV 24
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKL-SLGKEFHGY 119
SW+ ++ G + G E + +M G++P++ ++S++ AC R + G + HG+
Sbjct: 25 SWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGF 84
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ ++G +S+ +V ++ +Y + VSC +
Sbjct: 85 VAKSGLLSDVYVSTAILHLY----------------GVYGLVSC---------------S 113
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMR-DGIEPTSFTFGSVL 238
R++F++M R ++SW S++ GY D +E +++ MR +G+ + V+
Sbjct: 114 RKVFEEMP----DRNVVSWTSLMVGYSDKGEPEEVIDIYKG--MRGEGVGCNENSMSLVI 167
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
+C + G++I + GL+S V +L+ M ++ A FD++ + +
Sbjct: 168 SSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTI 227
Query: 299 LGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYA 358
+ N + + ++FS M + TV +LS + + G+ +H
Sbjct: 228 SWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLV 287
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGI 418
++ G+DS V + L+ MYA G A L +K++ T DL+S N+++ ++ G + +
Sbjct: 288 VKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDAL 347
Query: 419 AHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLL 478
+++SG ++++F SAL+AC + G L+ + + +V +
Sbjct: 348 GLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMY 407
Query: 479 SRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
+ GE+ E+ + ++P D V W AL+GG
Sbjct: 408 GKIGEMSESRRVLLQMP-RRDVVAWNALIGG 437
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 95/364 (26%), Positives = 164/364 (45%), Gaps = 43/364 (11%)
Query: 170 YCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEP 229
Y + G V AR LFD M R +SWN+M+SG V LY E FR + GI+P
Sbjct: 2 YTKFGRVKPARHLFDIMP----VRNEVSWNTMMSGIVRVGLYLEGMEFFRKMC-DLGIKP 56
Query: 230 TSFTFGSVLIACADMNSL-RKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMA 288
+SF S++ AC S+ R+G ++H GL SD +V A++ +Y Y + ++
Sbjct: 57 SSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKV 116
Query: 289 FDEIENIENLLGKMKEDGFEPNVYTWNAMQL-FSEMLSLDLTPDIY-------------T 334
F+E+ + NV +W ++ + +S+ + DIY +
Sbjct: 117 FEEMP--------------DRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENS 162
Query: 335 VGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS 394
+ +++S+C L G+Q+ ++ G +S + + +L+ M G++ +A + ++S
Sbjct: 163 MSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMS 222
Query: 395 TPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSE 454
D +S N++ AYA +GH +E F + + + + LS H K G
Sbjct: 223 ERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRG 282
Query: 455 FFDLMAYYDVKPSLKHYTCMVDLLSR----AGELGEAYEFIKKIPMAPDSVMWGALLGGC 510
L+ VK C+ + L R AG EA K++P D + W +L+
Sbjct: 283 IHGLV----VKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMP-TKDLISWNSLMASF 337
Query: 511 VSHG 514
V+ G
Sbjct: 338 VNDG 341
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 65/143 (45%), Gaps = 2/143 (1%)
Query: 376 MYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHIS 435
MY K G +K AR + + + VS N M++ G EG+ FR++ G +P
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 436 FLSALSACVHAGSI-KTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKI 494
S ++AC +GS+ + G + +A + + T ++ L G + + + +++
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 495 PMAPDSVMWGALLGGCVSHGNLE 517
P + V W +L+ G G E
Sbjct: 121 P-DRNVVSWTSLMVGYSDKGEPE 142
>gi|255542634|ref|XP_002512380.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548341|gb|EEF49832.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 736
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 158/465 (33%), Positives = 269/465 (57%), Gaps = 8/465 (1%)
Query: 138 VYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIIS 197
+Y +CG A+K+F ++ VS NT++ G+ NG++ R++FD+M ++R +I+
Sbjct: 1 MYFKCGVFSDAVKVFDDMPTRDTVSWNTMVSGFLRNGDLDTGRQVFDEM----LERNVIT 56
Query: 198 WNSMISGYVDNSLYDEAFSMFRDLLMRDG-IEPTSFTFGSVLIACADMNSLRKGKEIHAL 256
W ++ISG N +Y+++ +F + MR G IEP T+ S L AC+ + +L KG++IH L
Sbjct: 57 WTAIISGLSQNEMYEDSLGLF--VQMRCGLIEPNFLTYLSSLTACSGLQALEKGRQIHGL 114
Query: 257 AIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNA 316
LG+QS+ + AL+++Y + L A+ F+ ++ + + GF N + A
Sbjct: 115 VWKLGIQSNLCIESALMDLYSKCGSLEDARRVFESAVELDEVSMTVILVGFTQNGFEEEA 174
Query: 317 MQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDM 376
++ F +M+++ D V +L AC ++ GKQ+H+ I+ S+ +G L++M
Sbjct: 175 IEFFVKMVNIGTEVDPNMVSAVLGACGVDTSLGLGKQIHSLVIKRSLGSNPFVGNGLINM 234
Query: 377 YAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISF 436
Y+KCG L+ + + ++ + VS N+M+ A+A HG G + + ++ G P ++F
Sbjct: 235 YSKCGELQESIKVFNGLTCRNSVSWNSMIAAFARHGDGFRALRLYEEMIQEGAVPTDLTF 294
Query: 437 LSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIP 495
LS L AC H G + G +F M Y + P +HY C+VD+L RAG L EA I+++
Sbjct: 295 LSLLHACSHVGLVDKGMKFLKSMTKVYGISPRAEHYACVVDMLGRAGLLNEAKSLIERLS 354
Query: 496 MAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLAR 555
+ PD ++W ALLG C G+ E G+ AA++L+ LEP YV+LAN+++ GRW + AR
Sbjct: 355 IKPDVLIWQALLGACSIRGDTEIGKYAAEQLLLLEPKKPAPYVLLANIYSSKGRWDERAR 414
Query: 556 TRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTII 600
T ++MK+ + K G SWIE ++H F D+ H ++E IY ++
Sbjct: 415 TIKRMKEMGVAKETGISWIEIEKKVHSFVVEDKKHPQAEIIYGVL 459
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 122/419 (29%), Positives = 201/419 (47%), Gaps = 43/419 (10%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG DA KVF MP RD VSWN++V+ NG + + + M N++
Sbjct: 1 MYFKCGVFSDAVKVFDDMPTRDTVSWNTMVSGFLRNGDLDTGRQVFDEMLER-----NVI 55
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+A+I G +QN E+++G+ +M+ +EPN T S L AC+ LQ L G++ HG +
Sbjct: 56 TWTAIISGLSQNEMYEDSLGLFVQMRCGLIEPNFLTYLSSLTACSGLQALEKGRQIHGLV 115
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G SN + + L+D+Y +CG + A ++F +EVS I+VG+ +NG EA
Sbjct: 116 WKLGIQSNLCIESALMDLYSKCGSLEDARRVFESAVELDEVSMTVILVGFTQNGFEEEAI 175
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
E F +M ++G + ++P + +VL A
Sbjct: 176 EFFVKMVNIGTE----------------------------------VDPNMVS--AVLGA 199
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C SL GK+IH+L I L S+ FVG L+ MY + +L + F+ + ++
Sbjct: 200 CGVDTSLGLGKQIHSLVIKRSLGSNPFVGNGLINMYSKCGELQESIKVFNGLTCRNSVSW 259
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG-KQVHAYAI 359
F + + A++L+ EM+ P T +L ACS + +++G K + +
Sbjct: 260 NSMIAAFARHGDGFRALRLYEEMIQEGAVPTDLTFLSLLHACSHVGLVDKGMKFLKSMTK 319
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNAMLTAYAMHGHGKEG 417
G +VDM + G L A+ +R+S PD++ A+L A ++ G + G
Sbjct: 320 VYGISPRAEHYACVVDMLGRAGLLNEAKSLIERLSIKPDVLIWQALLGACSIRGDTEIG 378
>gi|449446125|ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 809
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 183/605 (30%), Positives = 307/605 (50%), Gaps = 68/605 (11%)
Query: 55 ETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGK 114
E N W+ +I + Q A + M + L + T ++ AC+ + K
Sbjct: 39 ENTNCFMWNMMIRAYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQACSIRRSEWEAK 98
Query: 115 EFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
+ H ++ + GF S+ +V N L++ + C +M A ++F++ S+ + VS N+I+ GY E G
Sbjct: 99 QVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIG 158
Query: 175 NVAEARELFDQMEHLGV---------------------------QRGIISWNSMISGYVD 207
NV EA+ ++ QM + ++ +++W+++I+ +
Sbjct: 159 NVEEAKHIYHQMPERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQ 218
Query: 208 NSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTF 267
N +Y+EA F + + G+ S L ACA++ + GK IH+L++ +G +S
Sbjct: 219 NEMYEEAIRTFVG-MHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYIN 277
Query: 268 VGGALVEMYCRYQDLVAAQMAFDE---------------------IENIENLLGKMKEDG 306
+ AL+ MY + D++ A+ FDE ++N + + M
Sbjct: 278 LQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMP--- 334
Query: 307 FEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGK 352
E +V +W++M LF EM PD T+ ++SAC+ LA +E+GK
Sbjct: 335 -EKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGK 393
Query: 353 QVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHG 412
VHAY R G +V +GT L+DMY KCG ++ A + + + + NA++ AM+G
Sbjct: 394 WVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNG 453
Query: 413 HGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGS-EFFDLMAYYDVKPSLKHY 471
+ + F + P+ I+F+ L AC H G + G F+ ++ + ++P++KHY
Sbjct: 454 LVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHY 513
Query: 472 TCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEP 531
CMVDLL RAG+L EA E + ++PM PD WGALLG C HG+ E G+ +LIEL+P
Sbjct: 514 GCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIELQP 573
Query: 532 NNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHD 591
++ G +V+L+N++A G+W D+ R M R+ K PGCS IE IH+F A D++H
Sbjct: 574 DHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRVLKIPGCSMIEANGVIHEFLAGDKTHP 633
Query: 592 RSEEI 596
+ I
Sbjct: 634 DMDAI 638
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 140/460 (30%), Positives = 227/460 (49%), Gaps = 50/460 (10%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y + G++++AK ++ MPER ++ NS++ GLV+EA + + M D +V+
Sbjct: 154 YIEIGNVEEAKHIYHQMPERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKD-----MVT 208
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
WSA+I F QN EEAI M G+ + S L ACA L +++GK H
Sbjct: 209 WSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSL 268
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
+ G S + N L+ +Y +CGD++ A K+F + + + +S N++I GY + V A+
Sbjct: 269 KIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKA 328
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
+FD M ++ ++SW+SMISGY N L+DE ++F+++ M G +P T SV+ AC
Sbjct: 329 IFDSMP----EKDVVSWSSMISGYAQNDLFDETLALFQEMQM-SGFKPDETTLVSVISAC 383
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK 301
A + +L +GK +HA GL + +G L++MY M +E +
Sbjct: 384 ARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMY----------MKCGCVETALEVFYG 433
Query: 302 MKEDGFEPNVYTWNAMQL--------------FSEMLSLDLTPDIYTVGIILSACSSLAT 347
M E G + TWNA+ L FS M +TP+ T +L AC +
Sbjct: 434 MIEKG----ISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGL 489
Query: 348 MERGKQ-----VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVSQ 401
++ G+ +H + I+ H G +VD+ + G L+ A R+ TPD+ +
Sbjct: 490 VDEGQHHFYSMIHDHKIQPNVK---HYG-CMVDLLGRAGKLQEAEELLNRMPMTPDVATW 545
Query: 402 NAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALS 441
A+L A HG + G R+++ +PDH F LS
Sbjct: 546 GALLGACKKHGDSEMGRRVGRKLIE--LQPDHDGFHVLLS 583
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 132/273 (48%), Gaps = 8/273 (2%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG + A+K+F D +SWNS+++ LV A + M D +V
Sbjct: 285 MYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKD-----VV 339
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SWS++I G+ QN +E + + MQ G +P+ TL SV+ ACARL L GK H YI
Sbjct: 340 SWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYI 399
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
RNG N + L+D+Y +CG + +AL++F K + N +I+G NG V +
Sbjct: 400 KRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSL 459
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
++F M+ V I++ ++ L DE F ++ I+P +G ++
Sbjct: 460 DMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDL 519
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALV 273
L++ +E L + + D GAL+
Sbjct: 520 LGRAGKLQEAEE---LLNRMPMTPDVATWGALL 549
>gi|326526103|dbj|BAJ93228.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 623
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 195/599 (32%), Positives = 309/599 (51%), Gaps = 60/599 (10%)
Query: 5 CGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSA 64
G + DA+++F P+RD VSW ++V A A G + EA L R + N+V+W+A
Sbjct: 52 AGRVPDARRLFDRTPDRDVVSWTAMVAAYARQGQLHEASALLHR----PDARRNVVTWTA 107
Query: 65 VIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLG-KEFHGYITRN 123
++ G+ + +EA + RM E N + +++L A A ++ F G R+
Sbjct: 108 LLSGYARARRVDEARALFDRMP----ERNVVSWNTMLEAYASAGRMGAACALFDGMPVRD 163
Query: 124 GFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELF 183
N ++ LV R G M A ++F + +N +S T+I G +G+ EAR LF
Sbjct: 164 AGSWN-ILLAALV----RSGTMDEARRLFERMPERNVMSWTTMISGLARSGSADEARALF 218
Query: 184 DQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACAD 243
D M +R ++SWN+MISGY N DEA +F ++ RD A
Sbjct: 219 DGMP----ERNVVSWNAMISGYARNLRIDEALDLFMNMPERD---------------VAS 259
Query: 244 MNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMK 303
N + G + + +DL AQ FDE+ +
Sbjct: 260 WNIMITG-------------------------FIQNKDLKKAQELFDEMPKRNVVSWTTM 294
Query: 304 EDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGY 363
+G + A+Q+F+ ML + P+ T + A S+LA + G+QVH + +
Sbjct: 295 MNGCLQGNESEMALQVFNGMLVDGIRPNQVTFLGAVDAGSNLAGLSEGQQVHQMICKTPF 354
Query: 364 DSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRR 423
D I ++L+ +YAKCG ++ AR + D++S N M+ AYA HG G E IA + +
Sbjct: 355 QFDNFIESSLMKLYAKCGEIRLARKVFDLSGEKDVISWNGMIAAYAHHGAGVEAIALYEK 414
Query: 424 ILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAG 482
+ + ++P+ ++++ LSAC H+G + G F+ MA + +HY+C++DL SRAG
Sbjct: 415 MQENRYKPNDVTYVGLLSACSHSGLVDEGLRIFEYMAKDKSIAVRDEHYSCLIDLCSRAG 474
Query: 483 ELGEAYEFIKKIPMAP-DSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLA 541
L +A I + + P S +W ALLGGC +HGN G +AA L+E EP+N G Y +L+
Sbjct: 475 RLDDAKRLINGLKLKPTSSTVWSALLGGCNAHGNESIGDLAARNLLEAEPDNAGTYTLLS 534
Query: 542 NLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTII 600
N++A AG+W + A+ R +M DR + K PGCSWIE +++H F A D+SH SE IY+++
Sbjct: 535 NIYASAGKWKEAAKIRSEMNDRGLKKQPGCSWIELANKVHVFVARDKSHSESELIYSLL 593
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 114/463 (24%), Positives = 210/463 (45%), Gaps = 63/463 (13%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y + +D+A+ +F MPER+ VSWN+++ A A+ G + A + M D S
Sbjct: 112 YARARRVDEARALFDRMPERNVVSWNTMLEAYASAGRMGAACALFDGMPVRDAG-----S 166
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKE-FHGYI 120
W+ ++ ++G +EA + RM E N + ++++ AR + F G
Sbjct: 167 WNILLAALVRSGTMDEARRLFERMP----ERNVMSWTTMISGLARSGSADEARALFDGMP 222
Query: 121 TRNGFMSNPFVV--NGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
RN VV N ++ Y R + AL +F ++ S N +I G+ +N ++ +
Sbjct: 223 ERN-------VVSWNAMISGYARNLRIDEALDLFMNMPERDVASWNIMITGFIQNKDLKK 275
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
A+ELFD+M +R ++SW +M++G + + + A +F +L+ DGI P TF +
Sbjct: 276 AQELFDEMP----KRNVVSWTTMMNGCLQGNESEMALQVFNGMLV-DGIRPNQVTFLGAV 330
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
A +++ L +G+++H + Q D F+ +L+++Y + ++ A+ FD L
Sbjct: 331 DAGSNLAGLSEGQQVHQMICKTPFQFDNFIESSLMKLYAKCGEIRLARKVFD-------L 383
Query: 299 LGKMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSS 344
G E +V +WN M L+ +M P+ T +LSACS
Sbjct: 384 SG-------EKDVISWNGMIAAYAHHGAGVEAIALYEKMQENRYKPNDVTYVGLLSACSH 436
Query: 345 LATMERGKQVHAYAIRCGYDSDVHIG----TALVDMYAKCGSLKHARLAYKRISTPDLVS 400
++ G ++ Y + D + + + L+D+ ++ G L A+ + S
Sbjct: 437 SGLVDEGLRIFEYMAK---DKSIAVRDEHYSCLIDLCSRAGRLDDAKRLINGLKLKPTSS 493
Query: 401 Q--NAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALS 441
+A+L HG+ G R +L + PD+ + LS
Sbjct: 494 TVWSALLGGCNAHGNESIGDLAARNLLEA--EPDNAGTYTLLS 534
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 60/117 (51%), Gaps = 2/117 (1%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KCG + A+KVF + E+D +SWN ++ A A +G +EA+ E+M + PN V
Sbjct: 367 LYAKCGEIRLARKVFDLSGEKDVISWNGMIAAYAHHGAGVEAIALYEKMQE-NRYKPNDV 425
Query: 61 SWSAVIGGFTQNGYDEEAIGML-FRMQAEGLEPNARTLSSVLPACARLQKLSLGKEF 116
++ ++ + +G +E + + + + + + S ++ C+R +L K
Sbjct: 426 TYVGLLSACSHSGLVDEGLRIFEYMAKDKSIAVRDEHYSCLIDLCSRAGRLDDAKRL 482
>gi|334182623|ref|NP_001185013.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332191339|gb|AEE29460.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 928
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 181/593 (30%), Positives = 308/593 (51%), Gaps = 75/593 (12%)
Query: 27 NSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQ 86
N+++ A G +EA ++M T +L+SW++++ F +G +A+G+L M
Sbjct: 283 NTLLRMYAGAGRSVEANLVFKQMP-----TKDLISWNSLMASFVNDGRSLDALGLLCSMI 337
Query: 87 AEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDML 146
+ G N T +S L AC G+ HG + +G N + N LV +Y + G+M
Sbjct: 338 SSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEM- 396
Query: 147 SALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYV 206
+E+R + QM +R +++WN++I GY
Sbjct: 397 ------------------------------SESRRVLLQMP----RRDVVAWNALIGGYA 422
Query: 207 DNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC---ADMNSLRKGKEIHALAIALGLQ 263
++ D+A + F+ + + +G+ T SVL AC D+ L +GK +HA ++ G +
Sbjct: 423 EDEDPDKALAAFQTMRV-EGVSSNYITVVSVLSACLLPGDL--LERGKPLHAYIVSAGFE 479
Query: 264 SDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAM------ 317
SD V +L+ MY + DL ++Q F+ ++N N+ TWNAM
Sbjct: 480 SDEHVKNSLITMYAKCGDLSSSQDLFNGLDN--------------RNIITWNAMLAANAH 525
Query: 318 --------QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHI 369
+L S+M S ++ D ++ LSA + LA +E G+Q+H A++ G++ D I
Sbjct: 526 HGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFI 585
Query: 370 GTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGF 429
A DMY+KCG + L S N +++A HG+ +E A F +L G
Sbjct: 586 FNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGI 645
Query: 430 RPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAY 488
+P H++F+S L+AC H G + G ++D++A + ++P+++H C++DLL R+G L EA
Sbjct: 646 KPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAE 705
Query: 489 EFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAG 548
FI K+PM P+ ++W +LL C HGNL+ G+ AA+ L +LEP + YV+ +N+FA G
Sbjct: 706 TFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTG 765
Query: 549 RWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
RW D+ R++M + + K CSW++ +D++ F DR+H ++ EIY ++
Sbjct: 766 RWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLE 818
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 153/594 (25%), Positives = 253/594 (42%), Gaps = 125/594 (21%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+YG G + ++KVF+ MP+R N+V
Sbjct: 86 LYGVYGLVSCSRKVFEEMPDR------------------------------------NVV 109
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW++++ G++ G EE I + M+ EG+ N ++S V+ +C L+ SLG++ G +
Sbjct: 110 SWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQV 169
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
++G S V N L+ + G++ A IF + S ++ +S N+I Y +NG++ E+
Sbjct: 170 VKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESF 229
Query: 181 ELFDQME--HLGVQRGIIS-------------WNSMISGYVDNSLYD------------- 212
+F M H V +S W I G V +D
Sbjct: 230 RIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMY 289
Query: 213 -------EAFSMFRDLLMRDGIEPTSF------------------------------TFG 235
EA +F+ + +D I S TF
Sbjct: 290 AGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFT 349
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDL-----VAAQMAFD 290
S L AC + KG+ +H L + GL + +G ALV MY + ++ V QM
Sbjct: 350 SALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRR 409
Query: 291 EIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLA-TME 349
++ L+G ED +P+ A+ F M ++ + TV +LSAC +E
Sbjct: 410 DVVAWNALIGGYAEDE-DPD----KALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLE 464
Query: 350 RGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYA 409
RGK +HAY + G++SD H+ +L+ MYAKCG L ++ + + ++++ NAML A A
Sbjct: 465 RGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANA 524
Query: 410 MHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLK 469
HGHG+E + ++ + G D SF LSA ++ G + L VK +
Sbjct: 525 HHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLA----VKLGFE 580
Query: 470 H----YTCMVDLLSRAGELGEAYEFIKKIPMAPDSVM--WGALLGGCVSHGNLE 517
H + D+ S+ GE+GE +K +P + + + W L+ HG E
Sbjct: 581 HDSFIFNAAADMYSKCGEIGEV---VKMLPPSVNRSLPSWNILISALGRHGYFE 631
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 101/454 (22%), Positives = 207/454 (45%), Gaps = 40/454 (8%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKL-SLGKEF 116
N VSW+ ++ G + G E + +M G++P++ ++S++ AC R + G +
Sbjct: 5 NEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQV 64
Query: 117 HGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNV 176
HG++ ++G +S+ +V ++ +Y + VSC
Sbjct: 65 HGFVAKSGLLSDVYVSTAILHLY----------------GVYGLVSC------------- 95
Query: 177 AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMR-DGIEPTSFTFG 235
+R++F++M R ++SW S++ GY D +E +++ MR +G+ +
Sbjct: 96 --SRKVFEEMP----DRNVVSWTSLMVGYSDKGEPEEVIDIYKG--MRGEGVGCNENSMS 147
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
V+ +C + G++I + GL+S V +L+ M ++ A FD++
Sbjct: 148 LVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSER 207
Query: 296 ENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVH 355
+ + + N + + ++FS M + TV +LS + + G+ +H
Sbjct: 208 DTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIH 267
Query: 356 AYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGK 415
++ G+DS V + L+ MYA G A L +K++ T DL+S N+++ ++ G
Sbjct: 268 GLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSL 327
Query: 416 EGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMV 475
+ + +++SG ++++F SAL+AC + G L+ + + +V
Sbjct: 328 DALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALV 387
Query: 476 DLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
+ + GE+ E+ + ++P D V W AL+GG
Sbjct: 388 SMYGKIGEMSESRRVLLQMPRR-DVVAWNALIGG 420
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 154/341 (45%), Gaps = 39/341 (11%)
Query: 193 RGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSL-RKGK 251
R +SWN+M+SG V LY E FR + GI+P+SF S++ AC S+ R+G
Sbjct: 4 RNEVSWNTMMSGIVRVGLYLEGMEFFRKMC-DLGIKPSSFVIASLVTACGRSGSMFREGV 62
Query: 252 EIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNV 311
++H GL SD +V A++ +Y Y + ++ F+E+ + NV
Sbjct: 63 QVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMP--------------DRNV 108
Query: 312 YTWNAMQL-FSEMLSLDLTPDIY-------------TVGIILSACSSLATMERGKQVHAY 357
+W ++ + +S+ + DIY ++ +++S+C L G+Q+
Sbjct: 109 VSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQ 168
Query: 358 AIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEG 417
++ G +S + + +L+ M G++ +A + ++S D +S N++ AYA +GH +E
Sbjct: 169 VVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEES 228
Query: 418 IAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDL 477
F + + + + LS H K G L+ VK C+ +
Sbjct: 229 FRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLV----VKMGFDSVVCVCNT 284
Query: 478 LSR----AGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
L R AG EA K++P D + W +L+ V+ G
Sbjct: 285 LLRMYAGAGRSVEANLVFKQMP-TKDLISWNSLMASFVNDG 324
>gi|297848206|ref|XP_002891984.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297337826|gb|EFH68243.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 611
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 181/599 (30%), Positives = 308/599 (51%), Gaps = 72/599 (12%)
Query: 19 PERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEA 78
P++ + +++ + GLV EA + M D +V+W+A+I G+ + Y+ A
Sbjct: 41 PKKHHILATNLIVSYFEKGLVEEARSLFDEMPERD-----VVAWTAMITGYASSNYNSCA 95
Query: 79 IGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDV 138
M +G PN TLSSVL +C ++ L+ G HG + + G + +V N L+++
Sbjct: 96 WECFHEMFKQGRSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNALMNM 155
Query: 139 YRRCG-DMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIIS 197
Y C M +A IF +KN+V+ T+I G+ HLG G
Sbjct: 156 YATCSVTMEAAFLIFRDIKVKNDVTWTTLITGFT----------------HLGDGIG--- 196
Query: 198 WNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALA 257
M++ +L+ + + T + + A A ++S+ GK+IHA
Sbjct: 197 ----------------GLKMYKQMLLENA-DVTPYCITIAVRASASIDSVTTGKQIHASV 239
Query: 258 IALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWN-- 315
+ G QS+ V ++++ YCR L A+ F E+E + ++ TWN
Sbjct: 240 VKRGFQSNLPVMNSILDFYCRCGYLSEAKRYFHEME--------------DKDLITWNTL 285
Query: 316 -----------AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYD 364
A+ +F S P+ YT +++AC+++A + G+Q+H R G++
Sbjct: 286 ISELERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIYRRGFN 345
Query: 365 SDVHIGTALVDMYAKCGSLKHARLAYKRISTP-DLVSQNAMLTAYAMHGHGKEGIAHFRR 423
+V + AL+DMYAKCG + + + I +LVS +M+ Y HG+G E + F +
Sbjct: 346 KNVELANALIDMYAKCGDIPDSERVFGEIEERRNLVSWTSMMIGYGSHGYGAEAVELFDK 405
Query: 424 ILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMVDLLSRAG 482
+++SG RPD I F++ LSAC HAG ++ G ++F++M + Y + P Y C+VDLL RAG
Sbjct: 406 MVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAG 465
Query: 483 ELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEF-GQIAADRLIELEPNNTGNYVMLA 541
++GEAYE ++++P PD WGA+LG C +H + ++AA +++EL+P G YVML+
Sbjct: 466 KIGEAYELVERMPFKPDESTWGAILGACKAHKHTGLISRLAAKKVMELKPRMVGTYVMLS 525
Query: 542 NLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTII 600
++A G+W + AR R+ M+ K G SWIE +++ F SD+ + +Y+++
Sbjct: 526 YIYAAEGKWVEFARVRKMMRMMGNKKEAGMSWIEVENQVFSFAVSDKMCPNASSVYSVL 584
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 59/118 (50%), Gaps = 3/118 (2%)
Query: 1 MYGKCGSLDDAKKVFKMMPE-RDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNL 59
MY KCG + D+++VF + E R+ VSW S++ ++G EA+E ++M S P+
Sbjct: 357 MYAKCGDIPDSERVFGEIEERRNLVSWTSMMIGYGSHGYGAEAVELFDKMVS-SGIRPDR 415
Query: 60 VSWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEF 116
+ + AV+ G E+ + M++E G+ P+ + V+ R K+ E
Sbjct: 416 IVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYEL 473
>gi|255558188|ref|XP_002520121.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540613|gb|EEF42176.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 589
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 188/595 (31%), Positives = 303/595 (50%), Gaps = 74/595 (12%)
Query: 22 DCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGM 81
D + N V+ + G V+ A + MS NLVSWSA+I G+ Q G A+ +
Sbjct: 37 DIIVSNHVINLYSKCGNVIFARRMFDEMSD-----RNLVSWSAIISGYDQTGQPLLALNL 91
Query: 82 LFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRR 141
+M+ + PN +SV+ ACA L LS G + H + G +S FV N L+ +Y +
Sbjct: 92 FSQMR---IVPNEYVFASVISACASLTALSQGLQVHAQSLKLGCVSVSFVSNALISMYMK 148
Query: 142 CGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSM 201
CG AL + + S N VS +N++
Sbjct: 149 CGLCTDALLVHNVMSEPNAVS-----------------------------------YNAL 173
Query: 202 ISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALG 261
I+G+V+N ++ F+ ++ + G P FTF +L C + +G ++H I L
Sbjct: 174 IAGFVENQQPEKGIEAFK-VMRQKGFAPDRFTFSGLLGICTSYDDFWRGMQLHCQMIKLN 232
Query: 262 LQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWN------ 315
L+ F+G ++ MY + F+ IE E + G +KE ++ +WN
Sbjct: 233 LEDSAFIGNVIITMYSK----------FNLIEEAEKVFGLIKEK----DLISWNTLVTAC 278
Query: 316 --------AMQLFSEMLSLDLT-PDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSD 366
A+++F +ML + PD +T +L+AC+ LA++ GKQ+H + IR D
Sbjct: 279 CFCKDHERALRVFRDMLDVCFVKPDDFTFAGVLAACAGLASIRHGKQIHGHLIRTRQYQD 338
Query: 367 VHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILA 426
V + ALV+MYAKCGS+K++ ++R S +LVS N ++ A+ HG G + HF ++
Sbjct: 339 VGVSNALVNMYAKCGSIKNSYDVFRRTSDRNLVSWNTIIAAFGNHGLGARALEHFEKMKT 398
Query: 427 SGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMVDLLSRAGELG 485
G PD ++F+ L+AC HAG ++ G +F+ M Y + P+++H++C++DLL RAG L
Sbjct: 399 VGIHPDSVTFVGLLTACNHAGLVEEGQVYFNSMEEAYGIFPNIEHFSCLIDLLGRAGRLQ 458
Query: 486 EAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFA 545
EA E+++K+P D ++ G+LL C HG++ G+ A +L++L+P T YV+L+NL+A
Sbjct: 459 EAEEYMEKLPFGHDPIILGSLLSACRLHGDMVIGEHLATQLLKLQPVTTSPYVLLSNLYA 518
Query: 546 YAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTII 600
W +A + +K + K PG S I+ KF D SH R EEI I
Sbjct: 519 SDEMWGGVAEAWKMLKYSGLKKEPGHSLIDVMGMFEKFTMGDLSHSRIEEIKDTI 573
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 122/506 (24%), Positives = 208/506 (41%), Gaps = 86/506 (16%)
Query: 97 LSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFS 156
+ S+L CA+++ G H + G +S+ V N ++++Y +CG+++ A ++F + S
Sbjct: 6 IGSLLHHCAKIKAFLHGLSLHAAALKTGMLSDIIVSNHVINLYSKCGNVIFARRMFDEMS 65
Query: 157 IKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFS 216
+N VS + II GY + G A LF QM
Sbjct: 66 DRNLVSWSAIISGYDQTGQPLLALNLFSQMR----------------------------- 96
Query: 217 MFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMY 276
I P + F SV+ ACA + +L +G ++HA ++ LG S +FV AL+ MY
Sbjct: 97 ----------IVPNEYVFASVISACASLTALSQGLQVHAQSLKLGCVSVSFVSNALISMY 146
Query: 277 CRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVG 336
+ A + + + + GF N ++ F M PD +T
Sbjct: 147 MKCGLCTDALLVHNVMSEPNAVSYNALIAGFVENQQPEKGIEAFKVMRQKGFAPDRFTFS 206
Query: 337 IILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTP 396
+L C+S RG Q+H I+ + IG ++ MY+K ++ A + I
Sbjct: 207 GLLGICTSYDDFWRGMQLHCQMIKLNLEDSAFIGNVIITMYSKFNLIEEAEKVFGLIKEK 266
Query: 397 DLVSQNAMLTAYAMHGHGKEGIAHFRRILASGF-RPDHISFLSALSACVHAGSIKTGSEF 455
DL+S N ++TA + + FR +L F +PD +F L+AC SI+ G +
Sbjct: 267 DLISWNTLVTACCFCKDHERALRVFRDMLDVCFVKPDDFTFAGVLAACAGLASIRHGKQI 326
Query: 456 FDLM----AYYDVKPSLKHYTCMVDLLSRAGELGEAY----------------------- 488
+ Y DV S +V++ ++ G + +Y
Sbjct: 327 HGHLIRTRQYQDVGVS----NALVNMYAKCGSIKNSYDVFRRTSDRNLVSWNTIIAAFGN 382
Query: 489 -----------EFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIE---LEPNNT 534
E +K + + PDSV + LL C G +E GQ+ + + E + P N
Sbjct: 383 HGLGARALEHFEKMKTVGIHPDSVTFVGLLTACNHAGLVEEGQVYFNSMEEAYGIFP-NI 441
Query: 535 GNYVMLANLFAYAGRWSDLARTRQKM 560
++ L +L AGR + +K+
Sbjct: 442 EHFSCLIDLLGRAGRLQEAEEYMEKL 467
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 117/254 (46%), Gaps = 39/254 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K +++A+KVF ++ E+D +SWN++VTAC C +
Sbjct: 246 MYSKFNLIEEAEKVFGLIKEKDLISWNTLVTAC-----------CFCK------------ 282
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFR--MQAEGLEPNARTLSSVLPACARLQKLSLGKEFHG 118
D E +FR + ++P+ T + VL ACA L + GK+ HG
Sbjct: 283 --------------DHERALRVFRDMLDVCFVKPDDFTFAGVLAACAGLASIRHGKQIHG 328
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
++ R + V N LV++Y +CG + ++ +F + S +N VS NTII + +G A
Sbjct: 329 HLIRTRQYQDVGVSNALVNMYAKCGSIKNSYDVFRRTSDRNLVSWNTIIAAFGNHGLGAR 388
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
A E F++M+ +G+ +++ +++ L +E F + GI P F ++
Sbjct: 389 ALEHFEKMKTVGIHPDSVTFVGLLTACNHAGLVEEGQVYFNSMEEAYGIFPNIEHFSCLI 448
Query: 239 IACADMNSLRKGKE 252
L++ +E
Sbjct: 449 DLLGRAGRLQEAEE 462
>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
[Vitis vinifera]
Length = 1580
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 184/577 (31%), Positives = 303/577 (52%), Gaps = 43/577 (7%)
Query: 27 NSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQ 86
NS+V + G A E M LD L+SW+++I Q+ +EE++ + +
Sbjct: 943 NSLVNMYSKMGCAYFAREVFNDMKHLD-----LISWNSMISSCAQSSLEEESVNLFIDLL 997
Query: 87 AEGLEPNARTLSSVLPACARL-QKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDM 145
EGL+P+ TL+SVL AC+ L L++ ++ H + + G +++ FV L+DVY + G M
Sbjct: 998 HEGLKPDHFTLASVLRACSSLIDGLNISRQIHVHALKTGNIADSFVATTLIDVYSKSGKM 1057
Query: 146 LSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGY 205
EA LF + L + WN+M+ GY
Sbjct: 1058 -------------------------------EEAEFLFQNKDDLD----LACWNAMMFGY 1082
Query: 206 VDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSD 265
+ + +A +F L+ + G + T + AC + L +GK+IHA AI G SD
Sbjct: 1083 IIGNDGKKALELF-SLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSD 1141
Query: 266 TFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLS 325
V +++MY + D+V A + F+ I +++ G N A++++ M
Sbjct: 1142 LHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQ 1201
Query: 326 LDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKH 385
+ PD YT ++ A S + +E+G+Q+HA I+ SD +GT+LVDMYAKCG+++
Sbjct: 1202 SRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIED 1261
Query: 386 ARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVH 445
A +K+++ ++ NAML A HG+ +E + F+ + + G PD +SF+ LSAC H
Sbjct: 1262 AYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSH 1321
Query: 446 AGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWG 504
AG E+ M Y ++P ++HY+C+VD L RAG + EA + I+ +P + +
Sbjct: 1322 AGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINR 1381
Query: 505 ALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRR 564
ALLG C G++E G+ A RL LEP ++ YV+L+N++A A RW D+ R+ MK +
Sbjct: 1382 ALLGACRIQGDVETGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKN 1441
Query: 565 MHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
+ K PG SWI+ ++ +H F DRSH +++ IY ++
Sbjct: 1442 VKKDPGFSWIDVKNMLHLFVVDDRSHPQADIIYDKVE 1478
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 142/533 (26%), Positives = 226/533 (42%), Gaps = 136/533 (25%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGSL A++VF PERD LV
Sbjct: 665 MYSKCGSLSSARQVFDTTPERD------------------------------------LV 688
Query: 61 SWSAVIGGF-----TQNGYDEEAIGMLFRMQAEGLEPNAR-TLSSVLPACARLQKLSLGK 114
+W+A++G + + +G +E + LFR+ L R TL+ VL C L +
Sbjct: 689 TWNAILGAYAASVDSNDGNAQEGL-HLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAE 747
Query: 115 EFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
HGY + G + FV LV++Y +CG M
Sbjct: 748 GVHGYAIKIGLEWDVFVSGALVNIYSKCGRM----------------------------- 778
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTF 234
+AR LFD M +R ++ WN M+ GYV L EAF +F + R G+ P F+
Sbjct: 779 --RDARLLFDWMR----ERDVVLWNMMLKGYVQLGLEKEAFQLFSEF-HRSGLRPDEFSV 831
Query: 235 GSVLIACADMNSLRKGK----EIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFD 290
+L +++N +GK ++ A A L L D +++C + L A D
Sbjct: 832 QLILNGVSEVN-WDEGKWLADQVQAYAAKLSLSDDN------PDVFCWNKKLSECLWAGD 884
Query: 291 EIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMER 350
W A++ F M L++ D T+ ++L+A + +E
Sbjct: 885 ----------------------NWGAIECFVNMNGLNIDYDAVTLLVVLAAVAGTDDLEL 922
Query: 351 GKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAM 410
GKQVH A++ G DSDV + +LV+MY+K G AR + + DL+S N+M+++ A
Sbjct: 923 GKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQ 982
Query: 411 HGHGKEGIAHFRRILASGFRPDHISFLSALSAC------------VHAGSIKTGSEFFDL 458
+E + F +L G +PDH + S L AC +H ++KTG+
Sbjct: 983 SSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQIHVHALKTGNIADSF 1042
Query: 459 MAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCV 511
+A T ++D+ S++G++ EA EF+ + D W A++ G +
Sbjct: 1043 VA-----------TTLIDVYSKSGKMEEA-EFLFQNKDDLDLACWNAMMFGYI 1083
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 108/229 (47%), Gaps = 36/229 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG + +A VF + D V+W S+++ C NG NE
Sbjct: 1151 MYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNG----------------NE----- 1189
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
++A+ + RM+ + P+ T ++++ A + + L G++ H +
Sbjct: 1190 ---------------DQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANV 1234
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ +S+PFV LVD+Y +CG++ A ++F K +++N N ++VG ++GN EA
Sbjct: 1235 IKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAV 1294
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEP 229
LF M+ G++ +S+ ++S L EA+ + GIEP
Sbjct: 1295 NLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEP 1343
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 93/413 (22%), Positives = 157/413 (38%), Gaps = 77/413 (18%)
Query: 108 QKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTII 167
L LGK H I +G + F+ N L+ +Y +CG + SA
Sbjct: 635 HNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSA------------------- 675
Query: 168 VGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYV-----DNSLYDEAFSMFRDLL 222
R++FD +R +++WN+++ Y ++ E +FR L
Sbjct: 676 ------------RQVFDTTP----ERDLVTWNAILGAYAASVDSNDGNAQEGLHLFR--L 717
Query: 223 MRDGIEPTS-FTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQD 281
+R + T+ T VL C + L + +H AI +GL+ D FV GALV +Y +
Sbjct: 718 LRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGR 777
Query: 282 LVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSA 341
+ A++ FD + + +L M G+ A QLFSE L PD ++V +IL+
Sbjct: 778 MRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNG 837
Query: 342 CSSLATMERGK----QVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPD 397
S + + GK QV AYA + D PD
Sbjct: 838 VSEV-NWDEGKWLADQVQAYAAKLSLSDD----------------------------NPD 868
Query: 398 LVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFD 457
+ N L+ G I F + D ++ L L+A ++ G +
Sbjct: 869 VFCWNKKLSECLWAGDNWGAIECFVNMNGLNIDYDAVTLLVVLAAVAGTDDLELGKQVHG 928
Query: 458 LMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGC 510
+ + + +V++ S+ G A E + D + W +++ C
Sbjct: 929 IAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHL-DLISWNSMISSC 980
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 83/183 (45%), Gaps = 34/183 (18%)
Query: 351 GKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAM 410
GK HA + G D + L+ MY+KCGSL AR + DLV+ NA+L AYA
Sbjct: 640 GKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAA 699
Query: 411 H-----GHGKEGIAHFRRILASGFRPDHISFLSALSAC-----------VHAGSIKTGSE 454
G+ +EG+ FR + AS ++ L C VH +IK G E
Sbjct: 700 SVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLE 759
Query: 455 FFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEA---YEFIKKIPMAPDSVMWGALLGGCV 511
+DV S +V++ S+ G + +A ++++++ D V+W +L G V
Sbjct: 760 -------WDVFVS----GALVNIYSKCGRMRDARLLFDWMRE----RDVVLWNMMLKGYV 804
Query: 512 SHG 514
G
Sbjct: 805 QLG 807
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 74/156 (47%), Gaps = 5/156 (3%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG+++DA ++FK M R+ WN+++ A +G EA+ + M S E P+ V
Sbjct: 1252 MYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIE-PDRV 1310
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
S+ ++ + G EA L M + G+EP S ++ A R L +E
Sbjct: 1311 SFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGR---AGLVQEADKV 1367
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKF 155
I F ++ + L+ R GD+ + ++ ++
Sbjct: 1368 IETMPFKASASINRALLGACRIQGDVETGKRVAARL 1403
>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 711
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 196/620 (31%), Positives = 311/620 (50%), Gaps = 81/620 (13%)
Query: 4 KCGSLDDAKKVFKMMPERDCV-----SWNSVVTACAANGLVLEALECLERMSSLDNETPN 58
KC ++ K++ M R C+ S + +V CA L L + N+ PN
Sbjct: 49 KCTTMSQLKQIHAQM-LRTCLFVDPFSASKIVAFCA-----LHDSGSLPYARLVFNQIPN 102
Query: 59 LVSWS--AVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEF 116
+++ ++I G+T +AI M +GL+P+ T S+ +C L + GK+
Sbjct: 103 PTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSCGVLCE---GKQL 159
Query: 117 HGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNV 176
H + T+ GF S+ ++ N L+++Y CG ++SA
Sbjct: 160 HCHSTKLGFASDAYIQNTLMNMYSNCGCLVSA---------------------------- 191
Query: 177 AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGS 236
R++FD+M V + ++SW +MI Y L EA +FR + + ++P T +
Sbjct: 192 ---RKVFDKM----VNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIA-SVKPNEITLVN 243
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
VL ACA L K++H G+ T + AL+++YC+ A+
Sbjct: 244 VLTACARSRDLETAKQVHKYIDETGIGFHTVLTSALMDVYCKCGCYPLAR---------- 293
Query: 297 NLLGKMKEDGFEPNVYTWN--------------AMQLFSEMLSLDLTPDIYTVGIILSAC 342
+L KM E N++ WN A+ LF+EM + D T+ +L AC
Sbjct: 294 DLFNKMPEK----NLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIAC 349
Query: 343 SSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQN 402
+ L +E GK +H Y + + DV +GTALVDMYAKCGS++ A ++ + D+++
Sbjct: 350 THLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWT 409
Query: 403 AMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-Y 461
A++ AM G G + + F + S +PD I+F+ L+AC HAG + G +F+ M
Sbjct: 410 ALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNK 469
Query: 462 YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQI 521
Y ++PS++HY CMVD+L RAG + EA + I+ +PMAPD + LL C HGNL +
Sbjct: 470 YGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHGNLVVAER 529
Query: 522 AADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIH 581
AA +LIEL+P N G YV+L+N+++ W + R+ M +R + K PGCS IE +H
Sbjct: 530 AAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERNIKKPPGCSAIEVGGVVH 589
Query: 582 KFRASDRSHDRSEEIYTIID 601
+F D SH +S EIY +D
Sbjct: 590 EFVKGDVSHPQSSEIYETLD 609
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 105/419 (25%), Positives = 181/419 (43%), Gaps = 47/419 (11%)
Query: 1 MYGKCGSLDDAKKVF----KMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNET 56
++ CG L + K++ K+ D N+++ + G ++ A + ++M +
Sbjct: 146 LFKSCGVLCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVN----- 200
Query: 57 PNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEF 116
++VSW+ +IG + Q EAI + RM+ ++PN TL +VL ACAR + L K+
Sbjct: 201 KSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQV 260
Query: 117 HGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNV 176
H YI G + + + L+DVY +CG A +F+K KN N +I G+ E+ +
Sbjct: 261 HKYIDETGIGFHTVLTSALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDY 320
Query: 177 AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGS 236
EA LF++M+ G++ T S
Sbjct: 321 EEALSLFNEMQ------------------------------------LSGVKGDKVTMAS 344
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
+LIAC + +L GK +H ++ D +G ALV+MY + + +A F E+ +
Sbjct: 345 LLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKD 404
Query: 297 NLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG-KQVH 355
+ G A++LF EM ++ PD T +L+ACS + G +
Sbjct: 405 VMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFN 464
Query: 356 AYAIRCGYDSDVHIGTALVDMYAKCGSLKHAR-LAYKRISTPDLVSQNAMLTAYAMHGH 413
+ + G + +VDM + G + A L PD +L+A +HG+
Sbjct: 465 SMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHGN 523
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 122/287 (42%), Gaps = 33/287 (11%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGS++ A +VF+ MPE+D ++W +++ A G L+ALE M + P+ +
Sbjct: 383 MYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEM-QMSEVKPDAI 441
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
++ V+ + G E I M + G++P+ ++ R +++ E
Sbjct: 442 TFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIA---EAEDL 498
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIV---GYCENGNV 176
I + FV+ GL+ R G+++ A + + + + T ++ Y N
Sbjct: 499 IQNMPMAPDYFVLVGLLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNW 558
Query: 177 AEARELFDQMEHLGVQR----------GIISWNSMISGYVDNSLYDEAFSMFRDLLMR-- 224
A+++ + M +++ G++ + + G V + E + D++ R
Sbjct: 559 EAAKKMRELMVERNIKKPPGCSAIEVGGVV--HEFVKGDVSHPQSSEIYETLDDMMRRLK 616
Query: 225 -DGIEPTSFTFGSVLIACADMNSLRKGKEI----HALAIALGLQSDT 266
G P VL DM+ K E+ LAIA GL S T
Sbjct: 617 SAGYVPDK---SEVLF---DMDEKEKENELSLHSEKLAIAFGLLSTT 657
>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 919
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 179/604 (29%), Positives = 315/604 (52%), Gaps = 49/604 (8%)
Query: 5 CGSLDDAKK-------VFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETP 57
C ++ D +K + K D + S++ +G + EAL+ + +
Sbjct: 254 CSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFD-----SGDRT 308
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
N+V W+ ++ + Q ++ + +RM A G+ PN T +L C ++ LG++ H
Sbjct: 309 NVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIH 368
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
+NGF S+ +V L+D+Y SK+ G +
Sbjct: 369 SLTIKNGFQSDMYVSGVLIDMY-------------SKY------------------GWLD 397
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
+A+ + D +E ++ ++SW SMI+GYV + EA F+++ GI P + S
Sbjct: 398 KAQRILDMIE----EKDVVSWTSMIAGYVQHEFCKEALETFKEM-QACGIWPDNIGLASA 452
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
+ ACA + ++ +G +IHA G +D + LV +Y R A +F+ IE+ E
Sbjct: 453 ISACAGIKAVHQGSQIHARVYVSGYSADVSIWNGLVYLYARCGISKEAFSSFEAIEHKEG 512
Query: 298 LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAY 357
+ GF + A+++F +M +++T +SA ++LA +++GKQ+HA
Sbjct: 513 ITWNGLISGFAQSGLYEEALKVFMKMDQAGAKYNVFTFVSSISASANLADIKQGKQIHAR 572
Query: 358 AIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEG 417
I+ GY S+ I AL+ +Y KCGS++ A++ + ++ + VS N ++T + HG G E
Sbjct: 573 VIKTGYTSETEISNALISLYGKCGSIEDAKMDFFEMTKRNEVSWNTIITCCSQHGRGLEA 632
Query: 418 IAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVD 476
+ F ++ G +P ++F+ L+AC H G ++ G +F M+ + + P HY C+VD
Sbjct: 633 LDLFDQMKQQGLKPSDVTFVGVLTACSHVGLVEEGLCYFKSMSNEHGIHPRPDHYACVVD 692
Query: 477 LLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGN 536
+L RAG+L A F++++P+ DS++W LL C H NLE G+ AA L+ELEP+++ +
Sbjct: 693 ILGRAGQLDRAKRFVEEMPIPADSMVWRTLLSACKVHKNLEIGEFAAKHLLELEPHDSAS 752
Query: 537 YVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEI 596
YV+L+N +A G+W+ + R+ MKDR + K PG SWIE ++ +H F DR H +++I
Sbjct: 753 YVLLSNAYAVTGKWASRDQIRKIMKDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLADQI 812
Query: 597 YTII 600
Y +
Sbjct: 813 YNFL 816
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 140/505 (27%), Positives = 223/505 (44%), Gaps = 70/505 (13%)
Query: 27 NSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQ 86
N ++ A G V A E +S DN VSW AV+ G+ QNG EEA+ + M
Sbjct: 81 NLLIDLYAKKGFVRRARRVFEELSVRDN-----VSWVAVLSGYAQNGLGEEAVRLYREMH 135
Query: 87 AEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDML 146
G+ P LSS+L AC + + LG+ H + + GF S FV N L+ +Y RC
Sbjct: 136 RSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNALISLYLRCRSFR 195
Query: 147 SALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYV 206
A ++F + V+ NT+I G+ + G+ A +FD+M+
Sbjct: 196 LADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQ------------------- 236
Query: 207 DNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDT 266
G+ P S T S+L AC+ + LRKGK++H+ + G+ D
Sbjct: 237 -----------------LSGLSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDY 279
Query: 267 FVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAM--------- 317
+ G+L+++Y + D+ A FD G NV WN M
Sbjct: 280 IMEGSLLDLYVKSGDIEEALQIFD--------------SGDRTNVVLWNLMLVAYGQIDD 325
Query: 318 -----QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTA 372
+F ML+ + P+ +T +L C+ + G+Q+H+ I+ G+ SD+++
Sbjct: 326 LAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVSGV 385
Query: 373 LVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPD 432
L+DMY+K G L A+ I D+VS +M+ Y H KE + F+ + A G PD
Sbjct: 386 LIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPD 445
Query: 433 HISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIK 492
+I SA+SAC ++ GS+ + + + +V L +R G EA+ +
Sbjct: 446 NIGLASAISACAGIKAVHQGSQIHARVYVSGYSADVSIWNGLVYLYARCGISKEAFSSFE 505
Query: 493 KIPMAPDSVMWGALLGGCVSHGNLE 517
I + + W L+ G G E
Sbjct: 506 AIEH-KEGITWNGLISGFAQSGLYE 529
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/433 (25%), Positives = 189/433 (43%), Gaps = 45/433 (10%)
Query: 108 QKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTII 167
++ L E H G + N L+D+Y + G + A ++F + S+++ VS ++
Sbjct: 56 RRWPLVPEIHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVL 115
Query: 168 VGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGI 227
GY +NG EA L+ +M R G+
Sbjct: 116 SGYAQNGLGEEAVRLYREMH------------------------------------RSGV 139
Query: 228 EPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQM 287
PT + S+L AC + G+ IH G S+TFVG AL+ +Y R + A
Sbjct: 140 VPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNALISLYLRCRSFRLADR 199
Query: 288 AFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLAT 347
F ++ +++ G + A+ +F EM L+PD T+ +L+ACS++
Sbjct: 200 VFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIASLLAACSAVGD 259
Query: 348 MERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTA 407
+ +GKQ+H+Y ++ G D + +L+D+Y K G ++ A + ++V N ML A
Sbjct: 260 LRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGDRTNVVLWNLMLVA 319
Query: 408 YAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPS 467
Y + F R+LA+G RP+ ++ L C H G I G + L +
Sbjct: 320 YGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSD 379
Query: 468 LKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLI 527
+ ++D+ S+ G L +A + I D V W +++ G V H EF + A +
Sbjct: 380 MYVSGVLIDMYSKYGWLDKAQRILDMIE-EKDVVSWTSMIAGYVQH---EFCKEALETFK 435
Query: 528 ELE-----PNNTG 535
E++ P+N G
Sbjct: 436 EMQACGIWPDNIG 448
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 98/416 (23%), Positives = 172/416 (41%), Gaps = 80/416 (19%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G LD A+++ M+ E+D VSW S++
Sbjct: 389 MYSKYGWLDKAQRILDMIEEKDVVSWTSMI------------------------------ 418
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
G+ Q+ + +EA+ MQA G+ P+ L+S + ACA ++ + G + H +
Sbjct: 419 ------AGYVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQIHARV 472
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+G+ ++ + NGLV +Y RCG A F K ++ N +I G+ ++G EA
Sbjct: 473 YVSGYSADVSIWNGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQSGLYEEAL 532
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
++F +M+ G + + FTF S + A
Sbjct: 533 KVFMKMDQAGAKYNV------------------------------------FTFVSSISA 556
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
A++ +++GK+IHA I G S+T + AL+ +Y + + A+M F E+ +
Sbjct: 557 SANLADIKQGKQIHARVIKTGYTSETEISNALISLYGKCGSIEDAKMDFFEMTKRNEVSW 616
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
+ A+ LF +M L P T +L+ACS + +E G Y
Sbjct: 617 NTIITCCSQHGRGLEALDLFDQMKQQGLKPSDVTFVGVLTACSHVGLVEEGL---CYFKS 673
Query: 361 CGYDSDVHIG----TALVDMYAKCGSLKHARLAYKRISTP-DLVSQNAMLTAYAMH 411
+ +H +VD+ + G L A+ + + P D + +L+A +H
Sbjct: 674 MSNEHGIHPRPDHYACVVDILGRAGQLDRAKRFVEEMPIPADSMVWRTLLSACKVH 729
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 150/331 (45%), Gaps = 16/331 (4%)
Query: 193 RGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGK- 251
RG S+N ++G++ ++ +F + G+V ACA G+
Sbjct: 4 RGAASFNRPLAGFLAPDDPEKLLPLFAAKCRQ------YMVLGAVDFACALRACRGSGRR 57
Query: 252 -----EIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDG 306
EIHA AI GL +G L+++Y + + A+ F+E+ +N+ G
Sbjct: 58 WPLVPEIHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSG 117
Query: 307 FEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSD 366
+ N A++L+ EM + P Y + ILSAC+ + G+ +H + G+ S+
Sbjct: 118 YAQNGLGEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSE 177
Query: 367 VHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILA 426
+G AL+ +Y +C S + A + + D V+ N +++ +A GHG + F +
Sbjct: 178 TFVGNALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQL 237
Query: 427 SGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGE 486
SG PD ++ S L+AC G ++ G + + + ++DL ++G++ E
Sbjct: 238 SGLSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEE 297
Query: 487 AYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
A + + V+W +L V++G ++
Sbjct: 298 ALQIFDSGDRT-NVVLWNLML---VAYGQID 324
>gi|326507322|dbj|BAJ95738.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 593
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 168/502 (33%), Positives = 279/502 (55%), Gaps = 7/502 (1%)
Query: 100 VLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKN 159
V +CA G++ H + G + + FV+ LVD Y + GDM SA+ F + +K+
Sbjct: 76 VFKSCALTASSCQGRQVHCHALVRGLLGDVFVLTALVDFYAKNGDMESAVSAFDEMPVKD 135
Query: 160 EVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFR 219
+ N +I GY + G+V +AR LFD ME +R SWNSMI+ Y + EA ++F
Sbjct: 136 PIPINCLITGYSKAGDVDKARRLFDGME----RRTSASWNSMIACYAHGGEFREALALF- 190
Query: 220 DLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRY 279
D ++ +G P + T SV CA L GK + L LQ + V AL+EMY +
Sbjct: 191 DRMLSEGARPNAITITSVFSICAKSGDLDTGKRVRDLIGEDDLQ-NVIVHTALMEMYVKC 249
Query: 280 QDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIIL 339
+ + A+ FD + + + G+ N +++LF M + D P+ T+ ++
Sbjct: 250 RAIDDARREFDRMSQRDVVAWSTMIAGYAQNGRPLESLELFERMKATDCRPNEVTLVGVI 309
Query: 340 SACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLV 399
SAC+ L + E +Q+ YA ++G+AL+DMY +CG + AR + R+ ++
Sbjct: 310 SACAQLGSDELVEQIGNYAENQRLPLTSYLGSALIDMYTRCGHVGRARSVFSRMEQKGVI 369
Query: 400 SQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM 459
+ N+M+ AM+G ++ I+ + ++ +G +P+ I+F++ L+AC HAG + G FF+ M
Sbjct: 370 TWNSMIRGLAMNGFAEDAISLYEKMAENGVQPNEITFVALLAACTHAGLVDQGMAFFEEM 429
Query: 460 AY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEF 518
+ V P ++H C+VDLL ++G L EAY+FI + + P++V+W LL C +H ++E
Sbjct: 430 KREHLVSPQVEHCACIVDLLCKSGGLWEAYKFICDMEVEPNAVIWTTLLSSCRAHADVEL 489
Query: 519 GQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRD 578
++A+ +L+ +EP+N+ YV+L+N++A AG W D R M+ + + K SWI+
Sbjct: 490 AKLASRKLLAMEPDNSSIYVLLSNIYADAGLWGDAREIRDLMRSKNVQKLSAYSWIKLDG 549
Query: 579 EIHKFRASDRSHDRSEEIYTII 600
E+HKF D H RS EIY +I
Sbjct: 550 EVHKFLVQDTYHPRSAEIYDVI 571
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 118/470 (25%), Positives = 195/470 (41%), Gaps = 53/470 (11%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y K G ++ A F MP +D + N ++T + G V +A + M E S
Sbjct: 115 YAKNGDMESAVSAFDEMPVKDPIPINCLITGYSKAGDVDKARRLFDGM-----ERRTSAS 169
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W+++I + G EA+ + RM +EG PNA T++SV CA+ L GK I
Sbjct: 170 WNSMIACYAHGGEFREALALFDRMLSEGARPNAITITSVFSICAKSGDLDTGKRVRDLIG 229
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
+ + N V L+++Y +C + A + F + S ++ V+ +T+I GY +NG E+ E
Sbjct: 230 EDD-LQNVIVHTALMEMYVKCRAIDDARREFDRMSQRDVVAWSTMIAGYAQNGRPLESLE 288
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
LF++M+ + P T V+ AC
Sbjct: 289 LFERMKATDCR------------------------------------PNEVTLVGVISAC 312
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK 301
A + S ++I A L +++G AL++MY R + A+ F +E +
Sbjct: 313 AQLGSDELVEQIGNYAENQRLPLTSYLGSALIDMYTRCGHVGRARSVFSRMEQKGVITWN 372
Query: 302 MKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRC 361
G N + +A+ L+ +M + P+ T +L+AC+ +++G R
Sbjct: 373 SMIRGLAMNGFAEDAISLYEKMAENGVQPNEITFVALLAACTHAGLVDQGMAFFEEMKRE 432
Query: 362 GYDS-DVHIGTALVDMYAKCGSLKHARLAYKRIS----TPDLVSQNAMLTAYAMHGHGKE 416
S V +VD+ K G L AYK I P+ V +L++ H +
Sbjct: 433 HLVSPQVEHCACIVDLLCKSGGLWE---AYKFICDMEVEPNAVIWTTLLSSCRAHADVEL 489
Query: 417 GIAHFRRILASGFRPDHISFLSALSAC-VHAGSIKTGSEFFDLMAYYDVK 465
R++LA PD+ S LS AG E DLM +V+
Sbjct: 490 AKLASRKLLA--MEPDNSSIYVLLSNIYADAGLWGDAREIRDLMRSKNVQ 537
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 107/231 (46%), Gaps = 40/231 (17%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC ++DDA++ F M +RD V+W++++ A NG LE+LE ERM + D PN V
Sbjct: 245 MYVKCRAIDDARREFDRMSQRDVVAWSTMIAGYAQNGRPLESLELFERMKATDCR-PNEV 303
Query: 61 SWSAVIGGFTQNGYDE--EAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHG 118
+ VI Q G DE E IG A Q+L L
Sbjct: 304 TLVGVISACAQLGSDELVEQIGNY----------------------AENQRLPL------ 335
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
++ + L+D+Y RCG + A +FS+ K ++ N++I G NG +
Sbjct: 336 ---------TSYLGSALIDMYTRCGHVGRARSVFSRMEQKGVITWNSMIRGLAMNGFAED 386
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEP 229
A L+++M GVQ I++ ++++ L D+ + F ++ + P
Sbjct: 387 AISLYEKMAENGVQPNEITFVALLAACTHAGLVDQGMAFFEEMKREHLVSP 437
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 102/229 (44%), Gaps = 33/229 (14%)
Query: 317 MQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDM 376
+Q FS M V ++ +C+ A+ +G+QVH +A+ G DV + TALVD
Sbjct: 55 LQTFSSMHRKGAYVPSGCVPLVFKSCALTASSCQGRQVHCHALVRGLLGDVFVLTALVDF 114
Query: 377 YAKCGSLKHARLAYKRISTPDLVSQNAMLTAY---------------------------- 408
YAK G ++ A A+ + D + N ++T Y
Sbjct: 115 YAKNGDMESAVSAFDEMPVKDPIPINCLITGYSKAGDVDKARRLFDGMERRTSASWNSMI 174
Query: 409 AMHGHG---KEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVK 465
A + HG +E +A F R+L+ G RP+ I+ S S C +G + TG DL+ D++
Sbjct: 175 ACYAHGGEFREALALFDRMLSEGARPNAITITSVFSICAKSGDLDTGKRVRDLIGEDDLQ 234
Query: 466 PSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
+ H T ++++ + + +A ++ D V W ++ G +G
Sbjct: 235 NVIVH-TALMEMYVKCRAIDDARREFDRMSQR-DVVAWSTMIAGYAQNG 281
>gi|297847366|ref|XP_002891564.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297337406|gb|EFH67823.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 596
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 182/566 (32%), Positives = 298/566 (52%), Gaps = 70/566 (12%)
Query: 55 ETPNLVSWSAVIGGFTQNGYDEEAIGMLF--RMQAEGLEPNARTLSSVLPACARLQKLSL 112
+TP++ W +++G F+ + L +M+ G+ P+ T +L A +L+ +
Sbjct: 63 QTPSIQLWDSLVGHFSGRVTLNRRLSFLSYRQMRRNGVVPSRHTFPPLLKAVFKLRDAN- 121
Query: 113 GKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCE 172
+FH +I + GF S+ FV N L+ Y CG +F E
Sbjct: 122 PFQFHAHILKFGFDSDLFVRNSLISGYSNCG-------LF-------------------E 155
Query: 173 NGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSF 232
G+ +FD E + ++SW +MI G+V N EA + F ++ R G+
Sbjct: 156 FGS-----RVFDGTE----DKDVVSWTAMIDGFVRNDSSLEAMTYFVEM-KRSGVAANEM 205
Query: 233 TFGSVLIACADMNSLRKGKEIHALAIALG-LQSDTFVGGALVEMYCRYQDLVAAQMAFDE 291
T SVL A +R G+ IH + G ++ D F+G +LV+MY + AQ FDE
Sbjct: 206 TVVSVLKATRKAEDVRFGRSIHGFYLEAGRVRCDVFIGSSLVDMYGKCGCYDDAQKVFDE 265
Query: 292 IENIENLLGKMKEDGFEPNVYTWNA--------------MQLFSEMLSLDLTPDIYTVGI 337
+ + NV TW A M +F EML D+ P+ T+
Sbjct: 266 MPS--------------RNVVTWTALIAGYVQGRCFEKGMFVFEEMLKSDVAPNEKTLSS 311
Query: 338 ILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPD 397
+LSAC+ + + RG++VH Y I+ + + +GT L+D YAKCG L+ A L ++R+ +
Sbjct: 312 VLSACAHVGALHRGRRVHCYVIKNSIEINTTVGTTLIDFYAKCGCLEEAILVFERLREKN 371
Query: 398 LVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFF- 456
+ + AM+ +A HG+ + F +L+S P+ ++F+ LSAC H G ++ G F
Sbjct: 372 VYTWTAMINGFAAHGYAIGAVDLFHTMLSSHVSPNEVTFIVVLSACAHGGLVEEGRRLFL 431
Query: 457 DLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNL 516
+ ++++P HY CMVDL R G L EA I+++PM P + +WGAL G C+ H +
Sbjct: 432 SMKERFNLEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNAVWGALFGSCLIHKDY 491
Query: 517 EFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIED 576
E G+ AA R+I+L+P+++G Y +LANL++ + W D+AR R++MKD+++ KSPGCSWIE
Sbjct: 492 ELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDDVARVRKQMKDQQVVKSPGCSWIEV 551
Query: 577 RDEIHKFRA-SDRSHDRSEEIYTIID 601
+ ++H+F A D+ S+++Y +D
Sbjct: 552 KGKLHEFIAFDDKKPLESDDLYKTLD 577
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 147/338 (43%), Gaps = 8/338 (2%)
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMR-DGIEPTSFTFGSV 237
AR L Q++ +Q W+S++ + + S MR +G+ P+ TF +
Sbjct: 55 ARRLLCQIQTPSIQL----WDSLVGHFSGRVTLNRRLSFLSYRQMRRNGVVPSRHTFPPL 110
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
L A + + HA + G SD FV +L+ Y FD E+ +
Sbjct: 111 LKAVFKLRDANPF-QFHAHILKFGFDSDLFVRNSLISGYSNCGLFEFGSRVFDGTEDKDV 169
Query: 298 LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAY 357
+ DGF N + AM F EM + + TV +L A + G+ +H +
Sbjct: 170 VSWTAMIDGFVRNDSSLEAMTYFVEMKRSGVAANEMTVVSVLKATRKAEDVRFGRSIHGF 229
Query: 358 AIRCG-YDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKE 416
+ G DV IG++LVDMY KCG A+ + + + ++V+ A++ Y ++
Sbjct: 230 YLEAGRVRCDVFIGSSLVDMYGKCGCYDDAQKVFDEMPSRNVVTWTALIAGYVQGRCFEK 289
Query: 417 GIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVD 476
G+ F +L S P+ + S LSAC H G++ G + ++ + T ++D
Sbjct: 290 GMFVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYVIKNSIEINTTVGTTLID 349
Query: 477 LLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
++ G L EA +++ + W A++ G +HG
Sbjct: 350 FYAKCGCLEEAILVFERL-REKNVYTWTAMINGFAAHG 386
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 119/274 (43%), Gaps = 43/274 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKCG DDA+KVF MP R N+V
Sbjct: 249 MYGKCGCYDDAQKVFDEMPSR------------------------------------NVV 272
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+A+I G+ Q E+ + + M + PN +TLSSVL ACA + L G+ H Y+
Sbjct: 273 TWTALIAGYVQGRCFEKGMFVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYV 332
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+N N V L+D Y +CG + A+ +F + KN + +I G+ +G A
Sbjct: 333 IKNSIEINTTVGTTLIDFYAKCGCLEEAILVFERLREKNVYTWTAMINGFAAHGYAIGAV 392
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+LF M V +++ ++S L +E +F + R +EP + + A
Sbjct: 393 DLFHTMLSSHVSPNEVTFIVVLSACAHGGLVEEGRRLFLSMKERFNLEPKADHY-----A 447
Query: 241 CADMNSLRKG--KEIHALAIALGLQSDTFVGGAL 272
C RKG +E AL + ++ V GAL
Sbjct: 448 CMVDLFGRKGLLEEAKALIERMPMEPTNAVWGAL 481
>gi|449480927|ref|XP_004156032.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49710-like [Cucumis sativus]
Length = 720
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 191/602 (31%), Positives = 316/602 (52%), Gaps = 50/602 (8%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KC L A++VF + + S+N++++A A V A + + M P+ V
Sbjct: 52 LYSKCRRLSAARRVFDHTHDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQ-----PDSV 106
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
S++ +I + + G + A + M+ L+ + TLS ++ AC + L ++ H
Sbjct: 107 SYNTLIAAYARRGDTQPAFQLFLEMREAFLDMDGFTLSGIITACG--INVGLIRQLHALS 164
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
VV GL D Y G N +I Y +NG + EAR
Sbjct: 165 ----------VVTGL-DSYVSVG--------------------NALITSYSKNGFLKEAR 193
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+F L R +SWNSM+ Y+ + +A ++ ++ +R G+ FT SVL A
Sbjct: 194 RIFHW---LSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVR-GLIVDIFTLASVLTA 249
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQD-LVAAQMAFDEIENIENLL 299
++ L G + HA I G ++ VG L+++Y + ++ + FDEI N + +L
Sbjct: 250 FTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVL 309
Query: 300 GKMKEDGFEPNVY---TWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHA 356
G+ ++Y + A++ F ++ + PD ++ ++SACS++++ +G+QVH
Sbjct: 310 WNTMISGY--SLYEDLSDEALECFRQLQGVGHRPDDCSLVCVISACSNMSSPSQGRQVHG 367
Query: 357 YAIRCGYDSD-VHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGK 415
A++ S+ + + AL+ MY+KCG+L+ A+ + + + VS N+M+ YA HG G
Sbjct: 368 LALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGF 427
Query: 416 EGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCM 474
+ + F+R+L F P +I+F+S L+AC H G ++ G +F++M + ++P H++CM
Sbjct: 428 QSLHLFQRMLEMDFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFSCM 487
Query: 475 VDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNT 534
+DLL RAG+L EA I+ IP P W ALLG C HGN+E AA+RL++L+P N
Sbjct: 488 IDLLGRAGKLSEAERLIETIPFDPGFFXWSALLGACRIHGNVELAIKAANRLLQLDPLNA 547
Query: 535 GNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSE 594
YVMLAN+++ GR D A R+ M+DR + K PGCSWIE IH F A D H +
Sbjct: 548 APYVMLANIYSDNGRLQDAASVRKLMRDRGVKKKPGCSWIEVNRRIHIFVAEDTFHPMIK 607
Query: 595 EI 596
+I
Sbjct: 608 KI 609
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 126/466 (27%), Positives = 224/466 (48%), Gaps = 21/466 (4%)
Query: 96 TLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKF 155
+ L C + L GK H ++ ++ ++ N + +Y +C + +A ++F
Sbjct: 10 SFRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHT 69
Query: 156 SIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAF 215
N S NT+I Y + V A +LFD+M Q +S+N++I+ Y AF
Sbjct: 70 HDCNVFSFNTLISAYAKESYVEVAHQLFDEMP----QPDSVSYNTLIAAYARRGDTQPAF 125
Query: 216 SMFRDLLMRDG-IEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVE 274
+F L MR+ ++ FT ++ AC L +++HAL++ GL S VG AL+
Sbjct: 126 QLF--LEMREAFLDMDGFTLSGIITACGINVGLI--RQLHALSVVTGLDSYVSVGNALIT 181
Query: 275 MYCRYQDLVAAQMAFDEI-ENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIY 333
Y + L A+ F + E+ + + + + A++L+ EM L DI+
Sbjct: 182 SYSKNGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIF 241
Query: 334 TVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGS-LKHARLAYKR 392
T+ +L+A +++ + G Q HA I+ GY + H+G+ L+D+Y+KCG + R +
Sbjct: 242 TLASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDE 301
Query: 393 ISTPDLVSQNAMLTAYAMHGH-GKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKT 451
IS PDLV N M++ Y+++ E + FR++ G RPD S + +SAC + S
Sbjct: 302 ISNPDLVLWNTMISGYSLYEDLSDEALECFRQLQGVGHRPDDCSLVCVISACSNMSSPSQ 361
Query: 452 GSEFFDLMAYYDVKPS--LKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
G + L D+ PS + ++ + S+ G L +A +P ++V + +++ G
Sbjct: 362 GRQVHGLALKLDI-PSNRISVNNALIAMYSKCGNLRDAKTLFDTMP-EHNTVSYNSMIAG 419
Query: 510 CVSHGNLEFGQIAA-DRLIELE--PNNTGNYVMLANLFAYAGRWSD 552
HG + F + R++E++ P N +LA A+ GR D
Sbjct: 420 YAQHG-MGFQSLHLFQRMLEMDFTPTNITFISVLAAC-AHTGRVED 463
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 124/282 (43%), Gaps = 23/282 (8%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG+L DAK +F MPE + VS+NS++ A +G+ ++L +RM +D TP +
Sbjct: 388 MYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMDF-TPTNI 446
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRM--QAEGLEPNARTLSSVLPACARLQKLSLGKEFHG 118
++ +V+ G E+ + F M Q G+EP A S ++ R KLS E
Sbjct: 447 TFISVLAACAHTGRVEDG-KIYFNMMKQKFGIEPEAGHFSCMIDLLGRAGKLS---EAER 502
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIV---GYCENGN 175
I F F + L+ R G++ A+K ++ + ++ ++ Y +NG
Sbjct: 503 LIETIPFDPGFFXWSALLGACRIHGNVELAIKAANRLLQLDPLNAAPYVMLANIYSDNGR 562
Query: 176 VAEARELFDQMEHLGVQRGI-ISW---NSMISGYVDNSLYDEAFSMFRDLL--MRDGIEP 229
+ +A + M GV++ SW N I +V + ++ L M I+
Sbjct: 563 LQDAASVRKLMRDRGVKKKPGCSWIEVNRRIHIFVAEDTFHPMIKKIQEYLEEMMRKIKK 622
Query: 230 TSFT--FGSVLIACADM-----NSLRKGKEIHALAIALGLQS 264
+T S + D LR G LA++ GL S
Sbjct: 623 VGYTPEVRSASVGGDDRVWQREEELRLGHHSEKLAVSFGLMS 664
>gi|218191314|gb|EEC73741.1| hypothetical protein OsI_08374 [Oryza sativa Indica Group]
Length = 667
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 177/525 (33%), Positives = 276/525 (52%), Gaps = 44/525 (8%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
+VSW+AVI G +NGY E A+ + M A+G+ + T+ SVLPACA+ + L+ G+ H
Sbjct: 173 TVVSWNAVIAGCVKNGYAERALEVFGEMAADGVGIDRATVVSVLPACAQAKDLNTGRAVH 232
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
+ G V N L+D+Y +C +
Sbjct: 233 RLVEDKGLGDYVAVKNALIDMYGKCRSL-------------------------------E 261
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
+AR +FD +H + ++SW +MI YV N EA S+ +LM P T +
Sbjct: 262 DARRVFDHCKH---DKDVVSWTAMIGAYVLNDRAFEAISLGCQMLMSGAAWPNGVTMVYL 318
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDE----IE 293
L ACA M S + K HAL I LGL+SD V AL++ Y R + ++ + E
Sbjct: 319 LSACASMPSGKHAKCTHALCIRLGLKSDIAVETALIDAYARCGKMKLMRLTLERGSWRAE 378
Query: 294 NIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ 353
L G E A++LF M++ + PD T+ IL A + A ++ GK
Sbjct: 379 TWNAALSGYTVSGREKK-----AIELFKRMIAESVRPDSATMASILPAYAESADLKEGKN 433
Query: 354 VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGH 413
+H + + G+ I T L+D+Y+K G L A ++ + D+V+ ++ Y++HGH
Sbjct: 434 IHCFLLTLGFLRSTEIATGLIDVYSKAGDLDAAWALFQWLPEKDVVAWTTIIAGYSIHGH 493
Query: 414 GKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFF-DLMAYYDVKPSLKHYT 472
+ I + R++ SG +P+ ++ + L AC HAG I G + F D+ + + P+ +HY+
Sbjct: 494 ARTAILLYDRMVESGGKPNTVTIATLLYACSHAGMIDEGIKVFKDMRNVHGLMPNGEHYS 553
Query: 473 CMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPN 532
C+VD+L RAG + EA+ I+ +P P + +WGALLG CV H N+EFG++AA RL +L+P
Sbjct: 554 CLVDMLGRAGRIEEAHRLIQDMPFEPSTSVWGALLGACVLHKNVEFGEVAAKRLFQLDPE 613
Query: 533 NTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDR 577
NTG+YV+L N++A A RW D+ R+ M +R + K PG S +E R
Sbjct: 614 NTGSYVLLGNIYAAADRWRDVQDVRRMMVERGLLKEPGSSLVEAR 658
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 138/491 (28%), Positives = 219/491 (44%), Gaps = 47/491 (9%)
Query: 57 PNLVSWS-AVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKE 115
P VS+S +++ +T G EA+ + M+A + T ACA L+ G+
Sbjct: 74 PPPVSFSNSLLRSYTGLGCHREALAVYSAMRAF----DHLTFPFAAKACAGLRLGRHGRA 129
Query: 116 FHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGN 175
H GF + +V N L+ +Y CGD+ +A +F + VS N +I G +NG
Sbjct: 130 VHCRALAAGFGGDTYVQNALISMYMSCGDVGAAEAVFGAMRNRTVVSWNAVIAGCVKNGY 189
Query: 176 VAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFG 235
A E+F +M DG+ T
Sbjct: 190 AERALEVFGEMA------------------------------------ADGVGIDRATVV 213
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
SVL ACA L G+ +H L GL V AL++MY + + L A+ FD ++
Sbjct: 214 SVLPACAQAKDLNTGRAVHRLVEDKGLGDYVAVKNALIDMYGKCRSLEDARRVFDHCKHD 273
Query: 296 ENLLGKMKEDG-FEPNVYTWNAMQLFSEML-SLDLTPDIYTVGIILSACSSLATMERGKQ 353
++++ G + N + A+ L +ML S P+ T+ +LSAC+S+ + + K
Sbjct: 274 KDVVSWTAMIGAYVLNDRAFEAISLGCQMLMSGAAWPNGVTMVYLLSACASMPSGKHAKC 333
Query: 354 VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGH 413
HA IR G SD+ + TAL+D YA+CG +K RL +R S + NA L+ Y + G
Sbjct: 334 THALCIRLGLKSDIAVETALIDAYARCGKMKLMRLTLERGSW-RAETWNAALSGYTVSGR 392
Query: 414 GKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTC 473
K+ I F+R++A RPD + S L A + +K G + S + T
Sbjct: 393 EKKAIELFKRMIAESVRPDSATMASILPAYAESADLKEGKNIHCFLLTLGFLRSTEIATG 452
Query: 474 MVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNN 533
++D+ S+AG+L A+ + +P D V W ++ G HG+ + DR++ E
Sbjct: 453 LIDVYSKAGDLDAAWALFQWLP-EKDVVAWTTIIAGYSIHGHARTAILLYDRMV--ESGG 509
Query: 534 TGNYVMLANLF 544
N V +A L
Sbjct: 510 KPNTVTIATLL 520
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/318 (28%), Positives = 143/318 (44%), Gaps = 12/318 (3%)
Query: 170 YCENGNVAEARELFDQMEHLGVQRGIISW-NSMISGYVDNSLYDEAFSMFRDLLMRDGIE 228
YC G + A L QM Q +S+ NS++ Y + EA +++ + D
Sbjct: 55 YCACGRPSSAHNLLAQMP----QPPPVSFSNSLLRSYTGLGCHREALAVYSAMRAFD--- 107
Query: 229 PTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMA 288
TF ACA + R G+ +H A+A G DT+V AL+ MY D+ AA+
Sbjct: 108 --HLTFPFAAKACAGLRLGRHGRAVHCRALAAGFGGDTYVQNALISMYMSCGDVGAAEAV 165
Query: 289 FDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATM 348
F + N + G N Y A+++F EM + + D TV +L AC+ +
Sbjct: 166 FGAMRNRTVVSWNAVIAGCVKNGYAERALEVFGEMAADGVGIDRATVVSVLPACAQAKDL 225
Query: 349 ERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNAMLTA 407
G+ VH G V + AL+DMY KC SL+ AR + D+VS AM+ A
Sbjct: 226 NTGRAVHRLVEDKGLGDYVAVKNALIDMYGKCRSLEDARRVFDHCKHDKDVVSWTAMIGA 285
Query: 408 YAMHGHGKEGIAHFRRILASGFR-PDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKP 466
Y ++ E I+ ++L SG P+ ++ + LSAC S K L +K
Sbjct: 286 YVLNDRAFEAISLGCQMLMSGAAWPNGVTMVYLLSACASMPSGKHAKCTHALCIRLGLKS 345
Query: 467 SLKHYTCMVDLLSRAGEL 484
+ T ++D +R G++
Sbjct: 346 DIAVETALIDAYARCGKM 363
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 106/434 (24%), Positives = 167/434 (38%), Gaps = 87/434 (20%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKC SL+DA++VF C ++V
Sbjct: 253 MYGKCRSLEDARRVFD---------------------------HC--------KHDKDVV 277
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLE-PNARTLSSVLPACARLQKLSLGKEFHGY 119
SW+A+IG + N EAI + +M G PN T+ +L ACA + K H
Sbjct: 278 SWTAMIGAYVLNDRAFEAISLGCQMLMSGAAWPNGVTMVYLLSACASMPSGKHAKCTHAL 337
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
R G S+ V L+D Y RCG M + S + E + N + GY +G +A
Sbjct: 338 CIRLGLKSDIAVETALIDAYARCGKMKLMRLTLERGSWRAE-TWNAALSGYTVSGREKKA 396
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
ELF +M + + + P S T S+L
Sbjct: 397 IELFKRM------------------------------------IAESVRPDSATMASILP 420
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
A A+ L++GK IH + LG T + L+++Y + DL AA F + + +
Sbjct: 421 AYAESADLKEGKNIHCFLLTLGFLRSTEIATGLIDVYSKAGDLDAAWALFQWLPEKDVVA 480
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG-------K 352
G+ + + A+ L+ M+ P+ T+ +L ACS ++ G +
Sbjct: 481 WTTIIAGYSIHGHARTAILLYDRMVESGGKPNTVTIATLLYACSHAGMIDEGIKVFKDMR 540
Query: 353 QVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHA-RLAYKRISTPDLVSQNAMLTAYAMH 411
VH G + + LVDM + G ++ A RL P A+L A +H
Sbjct: 541 NVH------GLMPNGEHYSCLVDMLGRAGRIEEAHRLIQDMPFEPSTSVWGALLGACVLH 594
Query: 412 GHGKEGIAHFRRIL 425
+ + G +R+
Sbjct: 595 KNVEFGEVAAKRLF 608
>gi|224082698|ref|XP_002306801.1| predicted protein [Populus trichocarpa]
gi|222856250|gb|EEE93797.1| predicted protein [Populus trichocarpa]
Length = 787
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 182/539 (33%), Positives = 288/539 (53%), Gaps = 38/539 (7%)
Query: 60 VSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
++W+++I GFTQNG EA+ +Q L+P+ +L S+L A RL L GKE H Y
Sbjct: 179 ITWNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAY 238
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+N SN + N L+D+Y +C C VA A
Sbjct: 239 AMKNWLDSNLRIGNTLIDMYSKC-------------------CC------------VAYA 267
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
+FD+M + + +ISW ++I+ Y N+ + EA + R + + G++ + GS L+
Sbjct: 268 GLVFDKM----INKDLISWTTVIAAYAQNNCHTEALKLLRKVQTK-GMDVDTMMIGSTLL 322
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
AC+ + L KE+H + GL SD + ++++Y ++ A F+ I+ + +
Sbjct: 323 ACSGLRCLSHAKEVHGYTLKRGL-SDLMMQNMIIDVYADCGNINYATRMFESIKCKDVVS 381
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
+ N A+ +F M + PD T+ ILSA +SL+ + +GK++H +
Sbjct: 382 WTSMISCYVHNGLANEALGVFYLMKETSVEPDSITLVSILSAAASLSALNKGKEIHGFIF 441
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
R G+ + +LVDMYA CGSL++A + + LV M+ AY MHG GK +
Sbjct: 442 RKGFMLEGSTVNSLVDMYACCGSLENAYKVFICTRSKSLVLWTTMINAYGMHGRGKAAVE 501
Query: 420 HFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMVDLL 478
F + PDHI+FL+ L AC H+G I G + M Y ++P +HY C+VDLL
Sbjct: 502 LFSIMEDQKLIPDHITFLALLYACSHSGLINEGKRLLETMKCKYQLEPWPEHYACLVDLL 561
Query: 479 SRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYV 538
RA L EAY F+K + + P + +W A LG C H N + G+IAA +L++L+P++ G+YV
Sbjct: 562 GRANHLEEAYHFVKSMQIEPTAEVWCAFLGACRIHSNKKLGEIAAQKLLDLDPDSPGSYV 621
Query: 539 MLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
+++N+FA +GRW D+ R +MK + K+PGCSWIE +++H F D+SH S +IY
Sbjct: 622 LISNVFAASGRWKDVEEVRMRMKGGGLKKNPGCSWIEVGNKVHTFLVRDKSHPESYKIY 680
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 129/462 (27%), Positives = 210/462 (45%), Gaps = 61/462 (13%)
Query: 85 MQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGD 144
M+ G+ ++ T VL AC ++ + G E HG I + G+ S FV N LV +Y +C D
Sbjct: 1 MRVLGVPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCND 60
Query: 145 MLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISG 204
+L A R+LFD+M + ++SWNS+IS
Sbjct: 61 ILGA-------------------------------RKLFDRMNE---RNDVVSWNSIISA 86
Query: 205 YVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQS 264
Y N EA +FR++ + G+ ++T + L AC D + + G EIHA +
Sbjct: 87 YSLNGQCMEALGLFREM-QKAGVGANTYTLVAALQACEDSSFKKLGMEIHAAILKSNQVL 145
Query: 265 DTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEML 324
D +V ALV M+ R+ + A FDE++ +N+ GF N A+Q F +
Sbjct: 146 DVYVANALVAMHVRFGKMSYAARIFDELDEKDNITWNSMIAGFTQNGLYNEALQFFCGLQ 205
Query: 325 SLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLK 384
+L PD ++ IL+A L + GK++HAYA++ DS++ IG L+DMY+KC +
Sbjct: 206 DANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMKNWLDSNLRIGNTLIDMYSKCCCVA 265
Query: 385 HARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSAC- 443
+A L + ++ DL+S ++ AYA + E + R++ G D + S L AC
Sbjct: 266 YAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALKLLRKVQTKGMDVDTMMIGSTLLACS 325
Query: 444 ----------VHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKK 493
VH ++K G DLM ++D+ + G + A +
Sbjct: 326 GLRCLSHAKEVHGYTLKRG--LSDLMM----------QNMIIDVYADCGNINYATRMFES 373
Query: 494 IPMAPDSVMWGALLGGCVSHG--NLEFGQIAADRLIELEPNN 533
I D V W +++ V +G N G + +EP++
Sbjct: 374 IK-CKDVVSWTSMISCYVHNGLANEALGVFYLMKETSVEPDS 414
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 143/542 (26%), Positives = 247/542 (45%), Gaps = 55/542 (10%)
Query: 27 NSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQ 86
NS+V+ A +L A + +RM NE ++VSW+++I ++ NG EA+G+ MQ
Sbjct: 49 NSLVSMYAKCNDILGARKLFDRM----NERNDVVSWNSIISAYSLNGQCMEALGLFREMQ 104
Query: 87 AEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDML 146
G+ N TL + L AC LG E H I ++ + + +V N LV ++ R G M
Sbjct: 105 KAGVGANTYTLVAALQACEDSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMS 164
Query: 147 SALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYV 206
A +IF + K+ ++ N++I G+ +NG
Sbjct: 165 YAARIFDELDEKDNITWNSMIAGFTQNG-------------------------------- 192
Query: 207 DNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDT 266
LY+EA F L ++P + S+L A + L GKEIHA A+ L S+
Sbjct: 193 ---LYNEALQFFCG-LQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMKNWLDSNL 248
Query: 267 FVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSL 326
+G L++MY + + A + FD++ N + + + N A++L ++ +
Sbjct: 249 RIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALKLLRKVQTK 308
Query: 327 DLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHA 386
+ D +G L ACS L + K+VH Y ++ G SD+ + ++D+YA CG++ +A
Sbjct: 309 GMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRGL-SDLMMQNMIIDVYADCGNINYA 367
Query: 387 RLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHA 446
++ I D+VS +M++ Y +G E + F + + PD I+ +S LSA
Sbjct: 368 TRMFESIKCKDVVSWTSMISCYVHNGLANEALGVFYLMKETSVEPDSITLVSILSAAASL 427
Query: 447 GSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYE-FIKKIPMAPDSVMWGA 505
++ G E + +VD+ + G L AY+ FI + V+W
Sbjct: 428 SALNKGKEIHGFIFRKGFMLEGSTVNSLVDMYACCGSLENAYKVFI--CTRSKSLVLWTT 485
Query: 506 LLGGCVSHGN----LEFGQIAADRLIELEPNNTGNYVMLANLFA--YAGRWSDLARTRQK 559
++ HG +E I D+ +L P++ LA L+A ++G ++ R +
Sbjct: 486 MINAYGMHGRGKAAVELFSIMEDQ--KLIPDHI---TFLALLYACSHSGLINEGKRLLET 540
Query: 560 MK 561
MK
Sbjct: 541 MK 542
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 111/429 (25%), Positives = 174/429 (40%), Gaps = 79/429 (18%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC + A VF M +D +SW +V+ A A N EAL+
Sbjct: 257 MYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALK---------------- 300
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+L ++Q +G++ + + S L AC+ L+ LS KE HGY
Sbjct: 301 --------------------LLRKVQTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYT 340
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G +S+ + N ++DVY CG++ A ++F K+ VS ++I Y NG
Sbjct: 341 LKRG-LSDLMMQNMIIDVYADCGNINYATRMFESIKCKDVVSWTSMISCYVHNG------ 393
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
L +EA +F L+ +EP S T S+L A
Sbjct: 394 -----------------------------LANEALGVFY-LMKETSVEPDSITLVSILSA 423
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
A +++L KGKEIH G + +LV+MY L A F + +L
Sbjct: 424 AASLSALNKGKEIHGFIFRKGFMLEGSTVNSLVDMYACCGSLENAYKVFICTRSKSLVLW 483
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
+ + + A++LFS M L PD T +L ACS + GK++ ++
Sbjct: 484 TTMINAYGMHGRGKAAVELFSIMEDQKLIPDHITFLALLYACSHSGLINEGKRL-LETMK 542
Query: 361 CGYDSDV---HIGTALVDMYAKCGSLKHARLAYKRIST-PDLVSQNAMLTAYAMHGHGKE 416
C Y + H LVD+ + L+ A K + P A L A +H + K
Sbjct: 543 CKYQLEPWPEHYA-CLVDLLGRANHLEEAYHFVKSMQIEPTAEVWCAFLGACRIHSNKKL 601
Query: 417 GIAHFRRIL 425
G +++L
Sbjct: 602 GEIAAQKLL 610
>gi|449463559|ref|XP_004149501.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
gi|449511944|ref|XP_004164096.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
Length = 566
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 169/555 (30%), Positives = 287/555 (51%), Gaps = 75/555 (13%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
N+ +++A+I GF NG + RM++ G+ P+ T V+ AC ++ ++ H
Sbjct: 41 NVFAYNAIIAGFVANGLAADGFQFYKRMRSVGVMPDKFTFPCVVRACCEFMEV---RKIH 97
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
G + + G N FV + LV+ Y + A K+F +
Sbjct: 98 GCLFKMGLELNVFVGSALVNTYLKVDGTEDAEKVFEELP--------------------- 136
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
+R ++ WN+MI+GY ++A +F+ + +GI + FT S+
Sbjct: 137 --------------ERDVVLWNAMINGYTKIGHLNKAVVVFKRM-GEEGISLSRFTTTSI 181
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
L M + G+ IH + +G S V AL++MY + + A M F+ I
Sbjct: 182 LSILTSMGDINNGRAIHGIVTKMGYSSCVAVSNALIDMYGKCKHTEDALMIFEMIN---- 237
Query: 298 LLGKMKEDGFEPNVYTWNA--------------MQLFSEMLSLDLTPDIYTVGIILSACS 343
E ++++WN+ ++LF +ML + PD+ T+ +L ACS
Sbjct: 238 ----------EKDLFSWNSIISAHEQCDDHDGTLRLFGKMLGSRVLPDVITITAVLPACS 287
Query: 344 SLATMERGKQVHAYAIRCGYDS-----DVHIGTALVDMYAKCGSLKHARLAYKRISTPDL 398
LA + G+++H Y I G DV + A++DMYAKCG +K+A + + + D+
Sbjct: 288 HLAALMHGREIHGYMIVNGLGKNENGDDVLLNNAIMDMYAKCGCMKNADIIFDLMRNKDV 347
Query: 399 VSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDL 458
S N M+ YAMHG+G E + F R+ + +PD ++F+ LSAC HAG + G F
Sbjct: 348 ASWNIMIMGYAMHGYGTEALDMFHRMCEAQIKPDVVTFVGVLSACSHAGFVHQGRSFLTR 407
Query: 459 MAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
M + V P+++HYTC++D+L RAG LGEAY+ ++IP+ + ++W ALLG C HGN E
Sbjct: 408 MELEFGVIPTIEHYTCIIDMLGRAGHLGEAYDLAQRIPLEDNLILWMALLGACRLHGNAE 467
Query: 518 FGQIAADRLIELEPNN--TGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIE 575
G + +++ +LEP + +G+Y+++++L+ GR+ + R+ MK++ + K+PGCSWIE
Sbjct: 468 LGNVVGEKITQLEPKHCGSGSYILMSSLYGVVGRYEEALEVRRTMKEQNVKKTPGCSWIE 527
Query: 576 DRDEIHKFRASDRSH 590
+D ++ F DR+H
Sbjct: 528 LKDGLYVFSMGDRTH 542
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/401 (24%), Positives = 178/401 (44%), Gaps = 46/401 (11%)
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ +GF+ P + L+++Y RC M A+ +F
Sbjct: 1 MVTSGFIHLPSSITSLINMYSRCNQMEEAVLVF--------------------------- 33
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRD-GIEPTSFTFGSVL 238
R+ + + R + ++N++I+G+V N L + F ++ MR G+ P FTF V+
Sbjct: 34 RDPYHE-------RNVFAYNAIIAGFVANGLAADGFQFYKR--MRSVGVMPDKFTFPCVV 84
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
AC + +RK IH +GL+ + FVG ALV Y + A+ F+E+ + +
Sbjct: 85 RACCEFMEVRK---IHGCLFKMGLELNVFVGSALVNTYLKVDGTEDAEKVFEELPERDVV 141
Query: 299 LGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYA 358
L +G+ + A+ +F M ++ +T ILS +S+ + G+ +H
Sbjct: 142 LWNAMINGYTKIGHLNKAVVVFKRMGEEGISLSRFTTTSILSILTSMGDINNGRAIHGIV 201
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGI 418
+ GY S V + AL+DMY KC + A + ++ I+ DL S N++++A+ +
Sbjct: 202 TKMGYSSCVAVSNALIDMYGKCKHTEDALMIFEMINEKDLFSWNSIISAHEQCDDHDGTL 261
Query: 419 AHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPS-----LKHYTC 473
F ++L S PD I+ + L AC H ++ G E M + + +
Sbjct: 262 RLFGKMLGSRVLPDVITITAVLPACSHLAALMHGREIHGYMIVNGLGKNENGDDVLLNNA 321
Query: 474 MVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
++D+ ++ G + A + I + D W ++ G HG
Sbjct: 322 IMDMYAKCGCMKNA-DIIFDLMRNKDVASWNIMIMGYAMHG 361
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 106/236 (44%), Gaps = 43/236 (18%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKC +DA +F+M+ E+D SWNS+++A
Sbjct: 219 MYGKCKHTEDALMIFEMINEKDLFSWNSIISA---------------------------- 250
Query: 61 SWSAVIGGFTQNGYDEEAIGMLF-RMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
+ D + LF +M + P+ T+++VLPAC+ L L G+E HGY
Sbjct: 251 ---------HEQCDDHDGTLRLFGKMLGSRVLPDVITITAVLPACSHLAALMHGREIHGY 301
Query: 120 ITRNGFMSNP-----FVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
+ NG N + N ++D+Y +CG M +A IF K+ S N +I+GY +G
Sbjct: 302 MIVNGLGKNENGDDVLLNNAIMDMYAKCGCMKNADIIFDLMRNKDVASWNIMIMGYAMHG 361
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPT 230
EA ++F +M ++ ++++ ++S + S + + G+ PT
Sbjct: 362 YGTEALDMFHRMCEAQIKPDVVTFVGVLSACSHAGFVHQGRSFLTRMELEFGVIPT 417
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 2/111 (1%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG + +A +F +M +D SWN ++ A +G EAL+ RM + P++V
Sbjct: 325 MYAKCGCMKNADIIFDLMRNKDVASWNIMIMGYAMHGYGTEALDMFHRMCEAQIK-PDVV 383
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKL 110
++ V+ + G+ + L RM+ E G+ P + ++ R L
Sbjct: 384 TFVGVLSACSHAGFVHQGRSFLTRMELEFGVIPTIEHYTCIIDMLGRAGHL 434
>gi|356564895|ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Glycine max]
Length = 778
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 184/607 (30%), Positives = 295/607 (48%), Gaps = 91/607 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y K + A+KVF MP+RD V WN+++T
Sbjct: 147 LYCKFSRVAYARKVFDKMPDRDTVLWNTMIT----------------------------- 177
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
G +N ++++ + M A+G+ ++ T+++VLPA A +Q++ +G
Sbjct: 178 -------GLVRNCCYDDSVQVFKDMVAQGVRLDSTTVATVLPAVAEMQEVKVGMGIQCLA 230
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ GF + +V+ GL+ V+ +C D V AR
Sbjct: 231 LKLGFHFDDYVLTGLISVFSKCED-------------------------------VDTAR 259
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRD---------GIEPTS 231
LF + + ++S+N++ISG+ N + A FR+LL+ G+ P S
Sbjct: 260 LLFGMIR----KPDLVSYNALISGFSCNGETECAVKYFRELLVSGQRVSSSTMVGLIPVS 315
Query: 232 FTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDE 291
FG + +AC I + G V AL +Y R ++ A+ FDE
Sbjct: 316 SPFGHLHLACC----------IQGFCVKSGTILQPSVSTALTTIYSRLNEIDLARQLFDE 365
Query: 292 IENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG 351
G+ + T A+ LF EM++ + TP+ T+ ILSAC+ L + G
Sbjct: 366 SSEKTVAAWNAMISGYAQSGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQLGALSFG 425
Query: 352 KQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMH 411
K VH + ++++ TAL+DMYAKCG++ A + S + V+ N M+ Y +H
Sbjct: 426 KSVHQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQLFDLTSEKNTVTWNTMIFGYGLH 485
Query: 412 GHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKH 470
G+G E + F +L GF+P ++FLS L AC HAG ++ G E F M Y ++P +H
Sbjct: 486 GYGDEALKLFNEMLHLGFQPSSVTFLSVLYACSHAGLVREGDEIFHAMVNKYRIEPLAEH 545
Query: 471 YTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELE 530
Y CMVD+L RAG+L +A EFI+K+P+ P +WG LLG C+ H + ++A++RL EL+
Sbjct: 546 YACMVDILGRAGQLEKALEFIRKMPVEPGPAVWGTLLGACMIHKDTNLARVASERLFELD 605
Query: 531 PNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSH 590
P N G YV+L+N+++ + A R+ +K R + K+PGC+ IE H F DRSH
Sbjct: 606 PGNVGYYVLLSNIYSVERNFPKAASVREAVKKRNLSKTPGCTLIEVNGTPHVFVCGDRSH 665
Query: 591 DRSEEIY 597
++ IY
Sbjct: 666 SQTTSIY 672
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 105/461 (22%), Positives = 204/461 (44%), Gaps = 46/461 (9%)
Query: 57 PNLVSWSAVIGGFTQNGYDEEAIGMLFR---MQAEGLEPNARTLSSVLPACARLQKLSLG 113
P++ ++ +I GF+ + +A + F ++ L P+ T + + A +LG
Sbjct: 69 PDIFLFNVLIKGFS---FSPDASSISFYTHLLKNTTLSPDNFTYAFAISASP---DDNLG 122
Query: 114 KEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCEN 173
H + +GF SN FV + LVD+Y + + A K+F K ++ V NT+I G
Sbjct: 123 MCLHAHAVVDGFDSNLFVASALVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITG---- 178
Query: 174 GNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFT 233
V N YD++ +F+D++ + G+ S T
Sbjct: 179 -------------------------------LVRNCCYDDSVQVFKDMVAQ-GVRLDSTT 206
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
+VL A A+M ++ G I LA+ LG D +V L+ ++ + +D+ A++ F I
Sbjct: 207 VATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYVLTGLISVFSKCEDVDTARLLFGMIR 266
Query: 294 NIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ 353
+ + GF N T A++ F E+L T+ ++ S +
Sbjct: 267 KPDLVSYNALISGFSCNGETECAVKYFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLACC 326
Query: 354 VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGH 413
+ + ++ G + TAL +Y++ + AR + S + + NAM++ YA G
Sbjct: 327 IQGFCVKSGTILQPSVSTALTTIYSRLNEIDLARQLFDESSEKTVAAWNAMISGYAQSGL 386
Query: 414 GKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTC 473
+ I+ F+ ++ + F P+ ++ S LSAC G++ G L+ +++ ++ T
Sbjct: 387 TEMAISLFQEMMTTEFTPNPVTITSILSACAQLGALSFGKSVHQLIKSKNLEQNIYVSTA 446
Query: 474 MVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
++D+ ++ G + EA + + ++V W ++ G HG
Sbjct: 447 LIDMYAKCGNISEASQLF-DLTSEKNTVTWNTMIFGYGLHG 486
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/418 (23%), Positives = 188/418 (44%), Gaps = 45/418 (10%)
Query: 174 GNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFT 233
G AR LF + + I +N +I G+ S + S + LL + P +FT
Sbjct: 54 GATRHARALFFSVP----KPDIFLFNVLIKGF-SFSPDASSISFYTHLLKNTTLSPDNFT 108
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
+ + A D N G +HA A+ G S+ FV ALV++YC++ + A+ FD++
Sbjct: 109 YAFAISASPDDN---LGMCLHAHAVVDGFDSNLFVASALVDLYCKFSRVAYARKVFDKMP 165
Query: 294 NIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ 353
+ + +L G N +++Q+F +M++ + D TV +L A + + ++ G
Sbjct: 166 DRDTVLWNTMITGLVRNCCYDDSVQVFKDMVAQGVRLDSTTVATVLPAVAEMQEVKVGMG 225
Query: 354 VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGH 413
+ A++ G+ D ++ T L+ +++KC + ARL + I PDLVS NA+++ ++ +G
Sbjct: 226 IQCLALKLGFHFDDYVLTGLISVFSKCEDVDTARLLFGMIRKPDLVSYNALISGFSCNGE 285
Query: 414 GKEGIAHFRRILASGFRPDHISFLSALSA----------------CVHAGSIKTGSEFFD 457
+ + +FR +L SG R + + + CV +G+I S
Sbjct: 286 TECAVKYFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLACCIQGFCVKSGTILQPSVSTA 345
Query: 458 LMAYY---------------DVKPSLKHYTCMVDLLSRAGELGEAYEFIKKI---PMAPD 499
L Y + ++ + M+ +++G A +++ P+
Sbjct: 346 LTTIYSRLNEIDLARQLFDESSEKTVAAWNAMISGYAQSGLTEMAISLFQEMMTTEFTPN 405
Query: 500 SVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYV--MLANLFAYAGRWSDLAR 555
V ++L C G L FG+ + +LI+ + YV L +++A G S+ ++
Sbjct: 406 PVTITSILSACAQLGALSFGK-SVHQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQ 462
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 79/183 (43%), Gaps = 22/183 (12%)
Query: 338 ILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPD 397
+L+ S T + HA IR GY D+ T L G+ +HAR + + PD
Sbjct: 11 LLALISKACTFPHLAETHAQLIRNGYQHDLATVTKLTQKLFDVGATRHARALFFSVPKPD 70
Query: 398 LVSQNAMLTAYAMHGHGKEGIAHFRRILA-SGFRPDHISFLSALSA--------CVHAGS 448
+ N ++ ++ I+ + +L + PD+ ++ A+SA C+HA +
Sbjct: 71 IFLFNVLIKGFSFSPDA-SSISFYTHLLKNTTLSPDNFTYAFAISASPDDNLGMCLHAHA 129
Query: 449 IKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLG 508
+ G FD +L + +VDL + + A + K+P D+V+W ++
Sbjct: 130 VVDG---FD--------SNLFVASALVDLYCKFSRVAYARKVFDKMP-DRDTVLWNTMIT 177
Query: 509 GCV 511
G V
Sbjct: 178 GLV 180
>gi|357436397|ref|XP_003588474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477522|gb|AES58725.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 668
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 172/514 (33%), Positives = 280/514 (54%), Gaps = 40/514 (7%)
Query: 90 LEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSAL 149
LEP+ + +L C L KL GK H ++ + F ++ + N ++ +Y +CG +L
Sbjct: 87 LEPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILFMYAKCG----SL 142
Query: 150 KIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDN- 208
+I AR++FD+M + +++W SMI+GY +
Sbjct: 143 EI---------------------------ARQVFDEM----CVKDVVTWTSMITGYSQDG 171
Query: 209 --SLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDT 266
S A +F +++ RDG+ P F S++ C + S GK+IH G Q +
Sbjct: 172 YASSATTALVLFLEMV-RDGLRPNEFALSSLVKCCGFLGSCVDGKQIHGCCWKYGFQENV 230
Query: 267 FVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSL 326
FVG +LV+MY R +L +++ FDE+E+ + GF A+ LF +M
Sbjct: 231 FVGSSLVDMYARCGELRESRLVFDELESKNEVSWNALISGFARKGEGEEALGLFVKMQRE 290
Query: 327 DLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHA 386
+T +L + S+ ++E+GK +HA+ ++ G ++G L+ MYAK G++ A
Sbjct: 291 GFGATEFTYSALLCSSSTTGSLEQGKWLHAHMMKSGKKLVGYVGNTLLHMYAKSGNICDA 350
Query: 387 RLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRI-LASGFRPDHISFLSALSACVH 445
+ + R+ D+VS N+ML YA HG GKE + F + L P+ I+FLS L+AC H
Sbjct: 351 KKVFDRLVKVDVVSCNSMLIGYAQHGLGKEAVELFEEMMLWVEIEPNDITFLSVLTACSH 410
Query: 446 AGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGA 505
AG + G +F+LM Y ++P L HYT +VDL RAG L +A FI+++P+ P++ +WGA
Sbjct: 411 AGLLDEGLYYFELMKKYGLEPKLSHYTTVVDLFGRAGLLDQAKSFIEEMPIEPNATIWGA 470
Query: 506 LLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRM 565
LLG H N E G AA +++EL+P G + +L+N++A AG+W D+A+ R++MKD +
Sbjct: 471 LLGASKMHKNTEMGAYAAQKVLELDPFYPGAHTLLSNIYASAGQWKDVAKVRKEMKDSGL 530
Query: 566 HKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTI 599
K P CSW+E + +H F A+D SH + ++Y +
Sbjct: 531 KKEPACSWVEIENSVHIFSANDISHPQKNKVYEM 564
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 117/448 (26%), Positives = 196/448 (43%), Gaps = 78/448 (17%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGSL+ A++VF M +D V+W S++T
Sbjct: 135 MYAKCGSLEIARQVFDEMCVKDVVTWTSMIT----------------------------- 165
Query: 61 SWSAVIGGFTQNGYDEE---AIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
G++Q+GY A+ + M +GL PN LSS++ C L GK+ H
Sbjct: 166 -------GYSQDGYASSATTALVLFLEMVRDGLRPNEFALSSLVKCCGFLGSCVDGKQIH 218
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
G + GF N FV + LVD+Y RCG++ + +F + KNEVS N +I G+ G
Sbjct: 219 GCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDELESKNEVSWNALISGFARKGEGE 278
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
EA LF +M+ R+G T FT+ ++
Sbjct: 279 EALGLFVKMQ------------------------------------REGFGATEFTYSAL 302
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
L + + SL +GK +HA + G + +VG L+ MY + ++ A+ FD + ++
Sbjct: 303 LCSSSTTGSLEQGKWLHAHMMKSGKKLVGYVGNTLLHMYAKSGNICDAKKVFDRLVKVDV 362
Query: 298 LLGKMKEDGFEPNVYTWNAMQLFSE-MLSLDLTPDIYTVGIILSACSSLATMERGKQVHA 356
+ G+ + A++LF E ML +++ P+ T +L+ACS ++ G
Sbjct: 363 VSCNSMLIGYAQHGLGKEAVELFEEMMLWVEIEPNDITFLSVLTACSHAGLLDEGLYYFE 422
Query: 357 YAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST-PDLVSQNAMLTAYAMHGHGK 415
+ G + + T +VD++ + G L A+ + + P+ A+L A MH + +
Sbjct: 423 LMKKYGLEPKLSHYTTVVDLFGRAGLLDQAKSFIEEMPIEPNATIWGALLGASKMHKNTE 482
Query: 416 EGIAHFRRILA-SGFRPDHISFLSALSA 442
G +++L F P + LS + A
Sbjct: 483 MGAYAAQKVLELDPFYPGAHTLLSNIYA 510
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 158/325 (48%), Gaps = 17/325 (5%)
Query: 220 DLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRY 279
DL+ +EP + +L C + L++GK +H + ++D + +++ MY +
Sbjct: 80 DLINNGSLEPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILFMYAKC 139
Query: 280 QDLVAAQMAFDE-----IENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYT 334
L A+ FDE + +++ +DG+ + T A+ LF EM+ L P+ +
Sbjct: 140 GSLEIARQVFDEMCVKDVVTWTSMITGYSQDGYASSATT--ALVLFLEMVRDGLRPNEFA 197
Query: 335 VGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS 394
+ ++ C L + GKQ+H + G+ +V +G++LVDMYA+CG L+ +RL + +
Sbjct: 198 LSSLVKCCGFLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDELE 257
Query: 395 TPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSE 454
+ + VS NA+++ +A G G+E + F ++ GF ++ + L + GS++ G
Sbjct: 258 SKNEVSWNALISGFARKGEGEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQGKW 317
Query: 455 FFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
M K ++ + +++G + +A + ++ + D V ++L G HG
Sbjct: 318 LHAHMMKSGKKLVGYVGNTLLHMYAKSGNICDAKKVFDRL-VKVDVVSCNSMLIGYAQHG 376
Query: 515 NLEFGQIAADRL------IELEPNN 533
G+ A + +E+EPN+
Sbjct: 377 ---LGKEAVELFEEMMLWVEIEPND 398
>gi|413946224|gb|AFW78873.1| hypothetical protein ZEAMMB73_227843 [Zea mays]
Length = 778
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 186/587 (31%), Positives = 287/587 (48%), Gaps = 73/587 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGK G L+ + VF M E++ VSWNS + A G + LE MS D
Sbjct: 264 MYGKFGDLESSMHVFNGMQEKNEVSWNSAIGCFAHAGFHEDVLEMFRLMSEHD------- 316
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+ P + TLSS+LPA L LGKE HGY
Sbjct: 317 -----------------------------VTPGSVTLSSLLPALVDLGYFHLGKELHGYS 347
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R S+ F+ N L+D+Y + G A IF ++N VS N +I +NG AEA
Sbjct: 348 IRRAVESDIFIANTLMDMYAKFGCSEKASAIFENIEVRNVVSWNAMIANLTQNGAEAEAF 407
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
L +M+ ++G P SFT ++L A
Sbjct: 408 RLVIEMQ------------------------------------KNGECPNSFTLVNLLPA 431
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C+ + S++ GK+IHA +I L SD FV AL+++Y + L A+ FD E + +
Sbjct: 432 CSRVASVKMGKQIHAWSIRRSLMSDLFVSNALIDVYAKCGQLNLARYIFDRSEK-DGVSY 490
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G+ + + ++ LF +M + D + LSACS+L+ ++GK++H ++
Sbjct: 491 NTLIVGYSQSQCCFESLHLFQQMRLAGIEHDAVSFMGCLSACSNLSAFKQGKEIHGVLVK 550
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
DS + +L+D+Y K G L A + RI+ D+ S N M+ Y MHG
Sbjct: 551 RLLDSHPFLANSLLDVYTKGGMLDTASKIFNRITQKDVASWNTMILGYGMHGQIDVAFEL 610
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSR 480
F + G DH+S+++ LS C H G + G ++F M ++KP HY CMVDLL R
Sbjct: 611 FDLMKDDGIEYDHVSYIAVLSVCSHGGLVDRGKKYFSQMIAQNIKPQQMHYACMVDLLGR 670
Query: 481 AGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVML 540
AG+L E+ E I+ +P +S +WGALLG C HG++E ++AA+ L EL+P N+G Y +L
Sbjct: 671 AGQLSESAEIIRNMPFRANSDVWGALLGSCRIHGDIELARLAAEHLFELKPENSGYYTLL 730
Query: 541 ANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASD 587
N+++ +G W++ ++ MK R++ K+P SW++ +++ F D
Sbjct: 731 RNMYSESGMWNEANGVKKLMKSRKVQKNPAYSWVQSGNKLQAFLVGD 777
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 110/434 (25%), Positives = 188/434 (43%), Gaps = 48/434 (11%)
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLS---SVLPACARLQKLSLGKEFHG 118
W+++ EA+ + RM G+ P+ RT A A+ + + G E H
Sbjct: 83 WNSLSRALASAALPCEALRVYNRMVRSGVRPDDRTFPFALHAAAAVAQAEHPAKGAELHA 142
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
R G + L DV+ + NT++ Y G A+
Sbjct: 143 AALRRGLL--------LADVF----------------------AGNTLVTFYAVCGRAAD 172
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
AR +FD+M R ++SWNS++S + N + ++A + MR G+ + S+L
Sbjct: 173 ARRVFDEMP----ARDVVSWNSLVSALLTNGMLEDAKRAVVGM-MRSGVPVNVASLVSIL 227
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
AC G +H L + GL S +G ALV+MY ++ DL ++ F+ ++ +
Sbjct: 228 PACGTERDEGFGLCVHGLVLKFGLNSVVNLGNALVDMYGKFGDLESSMHVFNGMQEKNEV 287
Query: 299 -----LGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ 353
+G GF +V +++F M D+TP T+ +L A L GK+
Sbjct: 288 SWNSAIGCFAHAGFHEDV-----LEMFRLMSEHDVTPGSVTLSSLLPALVDLGYFHLGKE 342
Query: 354 VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGH 413
+H Y+IR +SD+ I L+DMYAK G + A ++ I ++VS NAM+ +G
Sbjct: 343 LHGYSIRRAVESDIFIANTLMDMYAKFGCSEKASAIFENIEVRNVVSWNAMIANLTQNGA 402
Query: 414 GKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTC 473
E + +G P+ + ++ L AC S+K G + + L
Sbjct: 403 EAEAFRLVIEMQKNGECPNSFTLVNLLPACSRVASVKMGKQIHAWSIRRSLMSDLFVSNA 462
Query: 474 MVDLLSRAGELGEA 487
++D+ ++ G+L A
Sbjct: 463 LIDVYAKCGQLNLA 476
>gi|347954468|gb|AEP33734.1| chlororespiratory reduction 21, partial [Lepidium virginicum]
Length = 788
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 203/675 (30%), Positives = 330/675 (48%), Gaps = 148/675 (21%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKCG L+DA+KVF +PER N+V
Sbjct: 177 MYGKCGVLNDARKVFDKIPER------------------------------------NVV 200
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+A++ G+ QNG +EEAI +L M+ EG+EP T+S+ L A A ++ + GK+ H
Sbjct: 201 AWNALMVGYVQNGMNEEAIRLLSDMRKEGIEPTRVTVSTCLSASANIRGIEEGKQSHAIA 260
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+VNGL +M + + +I+ YC+ G V A
Sbjct: 261 ----------IVNGL--------EM-------------DNILGTSILNFYCKVGLVEYAE 289
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMR-DGIEPTSFTFGSVLI 239
+FD+M +++ +++WN +ISGYV L D+A M + LMR + + S T +++
Sbjct: 290 MIFDRM----IEKDVVTWNLLISGYVQQGLVDDAIHMCK--LMRLENLRYDSVTLSTLMS 343
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCR---------------YQDLV- 283
A A ++L+ GKE+ I +S+ + V+MY + +DL+
Sbjct: 344 AAARTHNLKLGKEVQCYCIRHCFESEIVLASTAVDMYAKCGSIVDAKKVFDSTVEKDLIL 403
Query: 284 ----------------AAQMAFD------------------------EIENIENLLGKMK 303
A ++ +D +++ + + +M+
Sbjct: 404 WNTLLAAYADSGLSGEALRLFYDMQLESVPPNMITWNSIILSLLRNGQVDEAKEMFLQMQ 463
Query: 304 EDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSSLATME 349
G PN+ +W M +M L P+ +++ + LSAC+ LA++
Sbjct: 464 SSGIFPNLISWTTMMNGLVQNGCSEEAINFLRKMQESGLRPNSFSITVALSACAHLASLN 523
Query: 350 RGKQVHAYAIR-CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAY 408
G+ +H Y IR + S V T+LVDMYAKCG + A A+ +L NAM++AY
Sbjct: 524 FGRSIHGYIIRNLQHSSSVSFVTSLVDMYAKCGDINQAEKAFGSKLYDELPLYNAMISAY 583
Query: 409 AMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFF-DLMAYYDVKPS 467
A++G+ KE IA +RR+ +PD I+F S LSAC HAG I F ++++ + +KP
Sbjct: 584 ALYGNMKEAIALYRRLEDMAIKPDSITFTSLLSACSHAGDIVQAINIFTEMVSKHGMKPC 643
Query: 468 LKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLI 527
L+HY MVDLL+ +GE +A E IK++P PD+ M +L+ E + +L+
Sbjct: 644 LEHYGLMVDLLASSGETNKALELIKEMPYKPDARMIQSLVASNNKQHKTELVDYLSKQLL 703
Query: 528 ELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDE--IHKFRA 585
E EP N+GNYV ++N FA G W ++ + R+ MK + + K PGCSWI+ + E +H F A
Sbjct: 704 ESEPENSGNYVTISNAFAIEGSWDEVVKMREMMKAKGLKKKPGCSWIQIKGEXGVHLFVA 763
Query: 586 SDRSHDRSEEIYTII 600
+D++H +++EI I+
Sbjct: 764 NDKTHIKNDEIQRIL 778
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 135/496 (27%), Positives = 233/496 (46%), Gaps = 41/496 (8%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
N+ SW+A+IG + G E A+ M G+ P+ + +V AC LQ G+ H
Sbjct: 97 NVFSWAAIIGLKCRIGLCEGALTGFVEMIENGVLPDNYVVPNVCKACGALQWTWFGRGVH 156
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
GY+ + G FV + L D+Y +CG + A K+F K +N V+ N ++VGY +NG
Sbjct: 157 GYLVKAGLHDCVFVASSLADMYGKCGVLNDARKVFDKIPERNVVAWNALMVGYVQNGMNE 216
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
EA L M ++GIEPT T +
Sbjct: 217 EAIRLLSDMR------------------------------------KEGIEPTRVTVSTC 240
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
L A A++ + +GK+ HA+AI GL+ D +G +++ YC+ + A+M FD + +
Sbjct: 241 LSASANIRGIEEGKQSHAIAIVNGLEMDNILGTSILNFYCKVGLVEYAEMIFDRMIEKDV 300
Query: 298 LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAY 357
+ + G+ +A+ + M +L D T+ ++SA + ++ GK+V Y
Sbjct: 301 VTWNLLISGYVQQGLVDDAIHMCKLMRLENLRYDSVTLSTLMSAAARTHNLKLGKEVQCY 360
Query: 358 AIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEG 417
IR ++S++ + + VDMYAKCGS+ A+ + DL+ N +L AYA G E
Sbjct: 361 CIRHCFESEIVLASTAVDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYADSGLSGEA 420
Query: 418 IAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDL 477
+ F + P+ I++ S + + + G + E F M + P+L +T M++
Sbjct: 421 LRLFYDMQLESVPPNMITWNSIILSLLRNGQVDEAKEMFLQMQSSGIFPNLISWTTMMNG 480
Query: 478 LSRAGELGEAYEFIKKIP---MAPDSVMWGALLGGCVSHGNLEFGQIAADRLIE-LEPNN 533
L + G EA F++K+ + P+S L C +L FG+ +I L+ ++
Sbjct: 481 LVQNGCSEEAINFLRKMQESGLRPNSFSITVALSACAHLASLNFGRSIHGYIIRNLQHSS 540
Query: 534 TGNYVM-LANLFAYAG 548
+ ++V L +++A G
Sbjct: 541 SVSFVTSLVDMYAKCG 556
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 107/488 (21%), Positives = 207/488 (42%), Gaps = 52/488 (10%)
Query: 66 IGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNG- 124
+ ++G EA+ ++ M+ + +L C + L G++ H I +NG
Sbjct: 2 VSSLCKHGEIREALRLVKEMEFRNVRIGPEIYGEILQGCVYERDLCTGQQIHARILKNGD 61
Query: 125 -FMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTII-----VGYCENGNVAE 178
+ N ++ L+ Y +C + A +FS+ ++N S II +G CE
Sbjct: 62 FYARNQYIETKLLIFYAKCDAIEVAQNLFSRLRVRNVFSWAAIIGLKCRIGLCEGA---- 117
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
++G+V+ ++ +G+ P ++ +V
Sbjct: 118 -----------------------LTGFVE--------------MIENGVLPDNYVVPNVC 140
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
AC + G+ +H + GL FV +L +MY + L A+ FD+I +
Sbjct: 141 KACGALQWTWFGRGVHGYLVKAGLHDCVFVASSLADMYGKCGVLNDARKVFDKIPERNVV 200
Query: 299 LGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYA 358
G+ N A++L S+M + P TV LSA +++ +E GKQ HA A
Sbjct: 201 AWNALMVGYVQNGMNEEAIRLLSDMRKEGIEPTRVTVSTCLSASANIRGIEEGKQSHAIA 260
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGI 418
I G + D +GT++++ Y K G +++A + + R+ D+V+ N +++ Y G + I
Sbjct: 261 IVNGLEMDNILGTSILNFYCKVGLVEYAEMIFDRMIEKDVVTWNLLISGYVQQGLVDDAI 320
Query: 419 AHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLL 478
+ + R D ++ + +SA ++K G E + + + + VD+
Sbjct: 321 HMCKLMRLENLRYDSVTLSTLMSAAARTHNLKLGKEVQCYCIRHCFESEIVLASTAVDMY 380
Query: 479 SRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG-NLEFGQIAADRLIELEPNN--TG 535
++ G + +A + + D ++W LL G + E ++ D +E P N T
Sbjct: 381 AKCGSIVDAKKVFDS-TVEKDLILWNTLLAAYADSGLSGEALRLFYDMQLESVPPNMITW 439
Query: 536 NYVMLANL 543
N ++L+ L
Sbjct: 440 NSIILSLL 447
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 154/359 (42%), Gaps = 38/359 (10%)
Query: 213 EAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGAL 272
EA + +++ R+ + +G +L C L G++IHA + G
Sbjct: 13 EALRLVKEMEFRN-VRIGPEIYGEILQGCVYERDLCTGQQIHARILKNG----------- 60
Query: 273 VEMYCRYQDLVAAQMAF----DEIENIENLLGKMKEDGFEPNVYTW-------------- 314
+ Y R Q + + F D IE +NL +++ NV++W
Sbjct: 61 -DFYARNQYIETKLLIFYAKCDAIEVAQNLFSRLRVR----NVFSWAAIIGLKCRIGLCE 115
Query: 315 NAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALV 374
A+ F EM+ + PD Y V + AC +L G+ VH Y ++ G V + ++L
Sbjct: 116 GALTGFVEMIENGVLPDNYVVPNVCKACGALQWTWFGRGVHGYLVKAGLHDCVFVASSLA 175
Query: 375 DMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHI 434
DMY KCG L AR + +I ++V+ NA++ Y +G +E I + G P +
Sbjct: 176 DMYGKCGVLNDARKVFDKIPERNVVAWNALMVGYVQNGMNEEAIRLLSDMRKEGIEPTRV 235
Query: 435 SFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKI 494
+ + LSA + I+ G + + ++ T +++ + G L E E I
Sbjct: 236 TVSTCLSASANIRGIEEGKQSHAIAIVNGLEMDNILGTSILNFYCKVG-LVEYAEMIFDR 294
Query: 495 PMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDL 553
+ D V W L+ G V G ++ I +L+ LE N + V L+ L + A R +L
Sbjct: 295 MIEKDVVTWNLLISGYVQQGLVD-DAIHMCKLMRLE-NLRYDSVTLSTLMSAAARTHNL 351
>gi|297808809|ref|XP_002872288.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318125|gb|EFH48547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 690
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 186/604 (30%), Positives = 300/604 (49%), Gaps = 84/604 (13%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K +D+ +VF MPERD +
Sbjct: 150 MYAKFNLFEDSVQVFDEMPERD------------------------------------VA 173
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ VI F Q G E+A+ + RM+ EPN+ +++ + AC+RL L GKE H
Sbjct: 174 SWNTVISSFYQRGDAEKALELFGRMERSDFEPNSVSITVAISACSRLLCLERGKEIHRKY 233
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ F + +V + LVD+Y RC D L AR
Sbjct: 234 LKKEFELDEYVNSALVDMYGRC-DFLEM------------------------------AR 262
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
E+F QM ++ +++WNSMI GYV + +++ +G P+ T S+L+A
Sbjct: 263 EVFQQMR----RKSLVAWNSMIRGYVARGDSKSCVELLNRMII-EGTRPSQTTLTSILMA 317
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAF-----DEIENI 295
C+ +L GK +H I + +D ++ +L+++Y + ++ A+ F D +E+
Sbjct: 318 CSRSRNLLHGKFVHGYVIRSVVDADIYINCSLIDLYFKCGEVKLAETVFLKTQKDVVESW 377
Query: 296 ENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVH 355
++ G+ + A+ ++ +M+S+ + PDI T +LS CS LA +E+GKQ+H
Sbjct: 378 NVMIS-----GYVSVGNWFKAVDVYDQMVSVGVQPDIVTFTSVLSTCSQLAALEKGKQIH 432
Query: 356 AYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGK 415
++D + +AL+DMY+KCG++K A + I D+VS M++AY HG +
Sbjct: 433 LSISESRLETDELLLSALLDMYSKCGNVKEASRIFNSIPKKDVVSWTVMISAYGSHGQPR 492
Query: 416 EGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCM 474
E + HF + G +PD ++FL+ LSAC HAG I G ++F M + Y ++ S++ Y+C+
Sbjct: 493 EALYHFDEMQKFGVKPDGVTFLAVLSACGHAGLIDEGVKYFSQMRSKYGIEASIEQYSCL 552
Query: 475 VDLLSRAGELGEAYEFIKKIPMAPDSV-MWGALLGGCVSHGNLEFGQIAADRLIELEPNN 533
+D+L RAG L EAY +++ P D+ + L C H + G A L+E P++
Sbjct: 553 IDILGRAGRLLEAYGILQQKPETRDNAELLSTLFCACCLHRDHLLGYTIAKLLVEKYPDD 612
Query: 534 TGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRS 593
Y +L NL+A W R R KMK+ M K PGCSWIE +++ F A DRSH ++
Sbjct: 613 ASTYTVLFNLYASGESWDAAKRVRLKMKEVGMRKKPGCSWIEMNEKVCHFFAEDRSHPQA 672
Query: 594 EEIY 597
E +Y
Sbjct: 673 ENVY 676
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 112/434 (25%), Positives = 186/434 (42%), Gaps = 65/434 (14%)
Query: 97 LSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFS 156
L S+L C + L K H I G S+ + L++VY C D SA +F
Sbjct: 6 LLSLLRECTNTKSLRQAKLVHQRILTVGLRSDVVLCKSLINVYFACKDHCSARLVFENID 65
Query: 157 IKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFS 216
I+++V WNS++SGY NS++ +
Sbjct: 66 IRSDVYI----------------------------------WNSLVSGYSKNSMFHDTLK 91
Query: 217 MFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMY 276
+F+ LL P SFT+ +V+ A + G+ IH + + G D V +LV MY
Sbjct: 92 VFKRLLNCPICVPDSFTYPNVIKAYGALGREFLGRMIHTVVVKSGHVCDVVVASSLVGMY 151
Query: 277 CRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWN--------------AMQLFSE 322
++ + FDE+ E +V +WN A++LF
Sbjct: 152 AKFNLFEDSVQVFDEMP--------------ERDVASWNTVISSFYQRGDAEKALELFGR 197
Query: 323 MLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGS 382
M D P+ ++ + +SACS L +ERGK++H ++ ++ D ++ +ALVDMY +C
Sbjct: 198 MERSDFEPNSVSITVAISACSRLLCLERGKEIHRKYLKKEFELDEYVNSALVDMYGRCDF 257
Query: 383 LKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSA 442
L+ AR ++++ LV+ N+M+ Y G K + R++ G RP + S L A
Sbjct: 258 LEMAREVFQQMRRKSLVAWNSMIRGYVARGDSKSCVELLNRMIIEGTRPSQTTLTSILMA 317
Query: 443 CVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYE-FIKKIPMAPDSV 501
C + ++ G + V + ++DL + GE+ A F+K +S
Sbjct: 318 CSRSRNLLHGKFVHGYVIRSVVDADIYINCSLIDLYFKCGEVKLAETVFLKTQKDVVES- 376
Query: 502 MWGALLGGCVSHGN 515
W ++ G VS GN
Sbjct: 377 -WNVMISGYVSVGN 389
>gi|356522600|ref|XP_003529934.1| PREDICTED: pentatricopeptide repeat-containing protein At2g46050,
mitochondrial-like [Glycine max]
Length = 644
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 182/615 (29%), Positives = 294/615 (47%), Gaps = 94/615 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KC DDA+K+F+ + R+ VSWN ++ G E
Sbjct: 94 VYLKCTEADDAEKLFEELSVRNVVSWNILIRGIVGCGDANE------------------- 134
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+ ++ RM E + P++ T + + C + + +G + H +
Sbjct: 135 ----------NDSNQQQCFSYFKRMLLELVVPDSTTFNGLFGVCVKFHDIDMGFQLHCFA 184
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G + FV + LVD+Y +CG V AR
Sbjct: 185 VKLGLDLDCFVGSVLVDLYAQCGL-------------------------------VENAR 213
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+F ++H R ++ WN MIS Y N L +EAF MF +L+ DG FTF ++L
Sbjct: 214 RVFLVVQH----RDLVVWNVMISCYALNCLPEEAFVMF-NLMRWDGANGDEFTFSNLLSI 268
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C + GK++H + L SD V AL+ MY + +++V A FD N++
Sbjct: 269 CDSLEYYDFGKQVHGHILRLSFDSDVLVASALINMYAKNENIVDAHRLFD------NMVI 322
Query: 301 KMKEDGFEPNVYTWNA--------------MQLFSEMLSLDLTPDIYTVGIILSACSSLA 346
+ NV WN M+L EML +PD T+ +S C ++
Sbjct: 323 R--------NVVAWNTIIVGYGNRREGNEVMKLLREMLREGFSPDELTISSTISLCGYVS 374
Query: 347 TMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLT 406
+ Q HA+A++ + + + +L+ Y+KCGS+ A ++ PDLVS +++
Sbjct: 375 AITETMQAHAFAVKSSFQEFLSVANSLISAYSKCGSITSACKCFRLTREPDLVSWTSLIN 434
Query: 407 AYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVK 465
AYA HG KE F ++L+ G PD ISFL LSAC H G + G +F+LM + Y +
Sbjct: 435 AYAFHGLAKEATEVFEKMLSCGIIPDQISFLGVLSACSHCGLVTKGLHYFNLMTSVYKIV 494
Query: 466 PSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADR 525
P HYTC+VDLL R G + EA+EF++ +PM +S GA + C H N+ + AA++
Sbjct: 495 PDSGHYTCLVDLLGRYGLINEAFEFLRSMPMEAESNTLGAFVASCNLHANIGLAKWAAEK 554
Query: 526 LIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRA 585
L +EP NY +++N++A WSD+ R R+ M ++ + PGCSWIE +++H F +
Sbjct: 555 LFTIEPEKNVNYAVMSNIYASHRHWSDVERVRRMMGNKCDARVPGCSWIEITNQVHSFVS 614
Query: 586 SDRSHDRSEEIYTII 600
+D+ H ++ E++ +
Sbjct: 615 NDKIHPKALEMHATL 629
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/417 (24%), Positives = 187/417 (44%), Gaps = 30/417 (7%)
Query: 98 SSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSI 157
++ L A+ L GK+ H ++ + GF + N ++ VY +C + A K+F + S+
Sbjct: 54 ANALKVSAKRALLPEGKQLHAHLIKFGFCHVLSLQNQILGVYLKCTEADDAEKLFEELSV 113
Query: 158 KNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSM 217
+N VS N +I G G+ E ++S + FS
Sbjct: 114 RNVVSWNILIRGIVGCGDANE----------------------------NDSNQQQCFSY 145
Query: 218 FRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYC 277
F+ +L+ + + P S TF + C + + G ++H A+ LGL D FVG LV++Y
Sbjct: 146 FKRMLL-ELVVPDSTTFNGLFGVCVKFHDIDMGFQLHCFAVKLGLDLDCFVGSVLVDLYA 204
Query: 278 RYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGI 337
+ + A+ F +++ + ++ + + N A +F+ M D +T
Sbjct: 205 QCGLVENARRVFLVVQHRDLVVWNVMISCYALNCLPEEAFVMFNLMRWDGANGDEFTFSN 264
Query: 338 ILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPD 397
+LS C SL + GKQVH + +R +DSDV + +AL++MYAK ++ A + + +
Sbjct: 265 LLSICDSLEYYDFGKQVHGHILRLSFDSDVLVASALINMYAKNENIVDAHRLFDNMVIRN 324
Query: 398 LVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFD 457
+V+ N ++ Y G E + R +L GF PD ++ S +S C + +I +
Sbjct: 325 VVAWNTIIVGYGNRREGNEVMKLLREMLREGFSPDELTISSTISLCGYVSAITETMQAHA 384
Query: 458 LMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
+ L ++ S+ G + A + ++ PD V W +L+ HG
Sbjct: 385 FAVKSSFQEFLSVANSLISAYSKCGSITSACKCF-RLTREPDLVSWTSLINAYAFHG 440
>gi|357449183|ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355483916|gb|AES65119.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 874
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 196/604 (32%), Positives = 300/604 (49%), Gaps = 85/604 (14%)
Query: 27 NSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQ 86
N++VT A G V EA + D LVSW+ +I +QN EEA+ L M
Sbjct: 225 NALVTMYAKLGRVYEAKTLFDVFDDKD-----LVSWNTIISSLSQNDRFEEALLYLHVML 279
Query: 87 AEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI-TRNGFMSNPFVVNGLVDVYRRCGDM 145
G+ PN TL+SVLPAC+ L+ L GKE H ++ N + N FV LVD+Y C
Sbjct: 280 QSGVRPNGVTLASVLPACSHLEMLGCGKEIHAFVLMNNDLIENSFVGCALVDMYCNCKQP 339
Query: 146 LSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGY 205
+F + N +I GY N EA ELF +M
Sbjct: 340 EKGRLVFDGMFRRTIAVWNAMIAGYVRNEFDYEAIELFVEM------------------- 380
Query: 206 VDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSD 265
F + G+ P S T SVL AC S + IH+ + G + D
Sbjct: 381 --------VFEL--------GLSPNSVTLSSVLPACVRCESFLDKEGIHSCVVKWGFEKD 424
Query: 266 TFVGGALVEMYCRYQDLVAAQMAFDEIENIE---------------------NLLGKMKE 304
+V AL++MY R + A+ F + + NLL M+
Sbjct: 425 KYVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITGYVVCGRHDDALNLLHDMQR 484
Query: 305 DGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYD 364
E + T++ + + + L P+ T+ +L C++LA + +GK++HAYA++
Sbjct: 485 GQAEHRINTFDD---YEDNKNFPLKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQMLS 541
Query: 365 SDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRI 424
DV +G+ALVDMYAKCG L +R ++++S ++++ N ++ AY MHG G+E + FRR+
Sbjct: 542 KDVAVGSALVDMYAKCGCLNLSRTVFEQMSVRNVITWNVLIMAYGMHGKGEEALKLFRRM 601
Query: 425 LASG-----FRPDHISFLSALSACVHAGSIKTG-SEFFDLMAYYDVKPSLKHYTCMVDLL 478
+ G RP+ +++++ ++ H+G + G + F+ + A + ++P+ HY C+VDLL
Sbjct: 602 VEEGDNNREIRPNEVTYIAIFASLSHSGMVDEGLNLFYTMKAKHGIEPTSDHYACLVDLL 661
Query: 479 SRAGELGEAYEFIKKIPMAPDSV-MWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNY 537
R+G++ EAY IK +P V W +LLG C H NLE G+IAA L L+P
Sbjct: 662 GRSGQIEEAYNLIKTMPSNMKKVDAWSSLLGACKIHQNLEIGEIAAKNLFVLDP------ 715
Query: 538 VMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
N+ Y + S L R KMK++ + K PGCSWIE DE+HKF A D SH +S+E++
Sbjct: 716 ----NVLDYGTKQSMLGR---KMKEKGVRKEPGCSWIEHGDEVHKFLAGDVSHPQSKEVH 768
Query: 598 TIID 601
++
Sbjct: 769 EYLE 772
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 140/554 (25%), Positives = 237/554 (42%), Gaps = 95/554 (17%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKCG +D A++VF + RD VSWNS++ A
Sbjct: 129 MYGKCGDIDAARRVFDEITNRDDVSWNSMINAAC-----------------------RFE 165
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARL-QKLSLGKEFHGY 119
W E A+ + M E + P + TL SV AC+ L L LGK+ H +
Sbjct: 166 EW-------------ELAVHLFRLMLLENVGPTSFTLVSVAHACSNLINGLLLGKQVHAF 212
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ RNG F N LV +Y + G + A +F F K+ VS NTI
Sbjct: 213 VLRNGDWRT-FTNNALVTMYAKLGRVYEAKTLFDVFDDKDLVSWNTI------------- 258
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
IS N ++EA ++ ++++ G+ P T SVL
Sbjct: 259 ----------------------ISSLSQNDRFEEAL-LYLHVMLQSGVRPNGVTLASVLP 295
Query: 240 ACADMNSLRKGKEIHALAIALG-LQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
AC+ + L GKEIHA + L ++FVG ALV+MYC + ++ FD +
Sbjct: 296 ACSHLEMLGCGKEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIA 355
Query: 299 LGKMKEDGFEPNVYTWNAMQLFSEML-SLDLTPDIYTVGIILSACSSLATMERGKQVHAY 357
+ G+ N + + A++LF EM+ L L+P+ T+ +L AC + + +H+
Sbjct: 356 VWNAMIAGYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDKEGIHSC 415
Query: 358 AIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHG--- 414
++ G++ D ++ AL+DMY++ G ++ AR + ++ D+VS N M+T Y + G
Sbjct: 416 VVKWGFEKDKYVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITGYVVCGRHDDA 475
Query: 415 -------KEGIAHFRRILASGF--------RPDHISFLSALSACVHAGSIKTGSEFFDLM 459
+ G A R + +P+ ++ ++ L C ++ G E
Sbjct: 476 LNLLHDMQRGQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAALAALGKGKEIHAYA 535
Query: 460 AYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFG 519
+ + + +VD+ ++ G L + +++ + + + W L+ HG E
Sbjct: 536 VKQMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQMSVR-NVITWNVLIMAYGMHGKGEEA 594
Query: 520 QIAADRLIELEPNN 533
R++E NN
Sbjct: 595 LKLFRRMVEEGDNN 608
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 114/236 (48%), Gaps = 23/236 (9%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY + G ++ A+ +F M +D VSWN+++T G +AL L M E
Sbjct: 434 MYSRMGRIEIARSIFGSMNRKDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQAE----- 488
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
N +D+ F L+PN+ TL +VLP CA L L GKE H Y
Sbjct: 489 --------HRINTFDDYEDNKNF-----PLKPNSVTLMTVLPGCAALAALGKGKEIHAYA 535
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ + V + LVD+Y +CG + + +F + S++N ++ N +I+ Y +G EA
Sbjct: 536 VKQMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQMSVRNVITWNVLIMAYGMHGKGEEAL 595
Query: 181 ELFDQMEHLG-----VQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTS 231
+LF +M G ++ +++ ++ + + + DE ++F + + GIEPTS
Sbjct: 596 KLFRRMVEEGDNNREIRPNEVTYIAIFASLSHSGMVDEGLNLFYTMKAKHGIEPTS 651
>gi|4966374|gb|AAD34705.1|AC006341_33 >F3O9.28 [Arabidopsis thaliana]
Length = 1027
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 181/593 (30%), Positives = 308/593 (51%), Gaps = 75/593 (12%)
Query: 27 NSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQ 86
N+++ A G +EA ++M T +L+SW++++ F +G +A+G+L M
Sbjct: 390 NTLLRMYAGAGRSVEANLVFKQMP-----TKDLISWNSLMASFVNDGRSLDALGLLCSMI 444
Query: 87 AEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDML 146
+ G N T +S L AC G+ HG + +G N + N LV +Y + G+M
Sbjct: 445 SSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEM- 503
Query: 147 SALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYV 206
+E+R + QM +R +++WN++I GY
Sbjct: 504 ------------------------------SESRRVLLQMP----RRDVVAWNALIGGYA 529
Query: 207 DNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC---ADMNSLRKGKEIHALAIALGLQ 263
++ D+A + F+ + + +G+ T SVL AC D+ L +GK +HA ++ G +
Sbjct: 530 EDEDPDKALAAFQTMRV-EGVSSNYITVVSVLSACLLPGDL--LERGKPLHAYIVSAGFE 586
Query: 264 SDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAM------ 317
SD V +L+ MY + DL ++Q F+ ++N N+ TWNAM
Sbjct: 587 SDEHVKNSLITMYAKCGDLSSSQDLFNGLDN--------------RNIITWNAMLAANAH 632
Query: 318 --------QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHI 369
+L S+M S ++ D ++ LSA + LA +E G+Q+H A++ G++ D I
Sbjct: 633 HGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFI 692
Query: 370 GTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGF 429
A DMY+KCG + L S N +++A HG+ +E A F +L G
Sbjct: 693 FNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGI 752
Query: 430 RPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAY 488
+P H++F+S L+AC H G + G ++D++A + ++P+++H C++DLL R+G L EA
Sbjct: 753 KPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAE 812
Query: 489 EFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAG 548
FI K+PM P+ ++W +LL C HGNL+ G+ AA+ L +LEP + YV+ +N+FA G
Sbjct: 813 TFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTG 872
Query: 549 RWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
RW D+ R++M + + K CSW++ +D++ F DR+H ++ EIY ++
Sbjct: 873 RWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLE 925
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 145/569 (25%), Positives = 246/569 (43%), Gaps = 100/569 (17%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALEC--------------- 45
+YG G + ++KVF+ MP+R+ VSW S++ + G E ++
Sbjct: 218 LYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKDESLGRQIIGQVV 277
Query: 46 ---LERMSSLDNETPNL----------------------VSWSAVIGGFTQNGYDEEAIG 80
LE +++N ++ +SW+++ + QNG+ EE+
Sbjct: 278 KSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFR 337
Query: 81 MLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYR 140
+ M+ E N+ T+S++L + G+ HG + + GF S V N L+ +Y
Sbjct: 338 IFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYA 397
Query: 141 RCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNS 200
G + A +F + K+ +S N+++ + +G +A L S
Sbjct: 398 GAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLL---------------CS 442
Query: 201 MISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIAL 260
MIS G TF S L AC + KG+ +H L +
Sbjct: 443 MIS---------------------SGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVS 481
Query: 261 GLQSDTFVGGALVEMYCRYQDL-----VAAQMAFDEIENIENLLGKMKEDGFEPNVYTWN 315
GL + +G ALV MY + ++ V QM ++ L+G ED +P+
Sbjct: 482 GLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDE-DPD----K 536
Query: 316 AMQLFSEMLSLDLTPDIYTVGIILSACSSLA-TMERGKQVHAYAIRCGYDSDVHIGTALV 374
A+ F M ++ + TV +LSAC +ERGK +HAY + G++SD H+ +L+
Sbjct: 537 ALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLI 596
Query: 375 DMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHI 434
MYAKCG L ++ + + ++++ NAML A A HGHG+E + ++ + G D
Sbjct: 597 TMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQF 656
Query: 435 SFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKH----YTCMVDLLSRAGELGEAYEF 490
SF LSA ++ G + L VK +H + D+ S+ GE+GE
Sbjct: 657 SFSEGLSAAAKLAVLEEGQQLHGLA----VKLGFEHDSFIFNAAADMYSKCGEIGEV--- 709
Query: 491 IKKIPMAPDSVM--WGALLGGCVSHGNLE 517
+K +P + + + W L+ HG E
Sbjct: 710 VKMLPPSVNRSLPSWNILISALGRHGYFE 738
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 128/569 (22%), Positives = 237/569 (41%), Gaps = 99/569 (17%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G + A+ +F +MP R N V
Sbjct: 116 MYTKFGRVKPARHLFDIMPVR------------------------------------NEV 139
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKL-SLGKEFHGY 119
SW+ ++ G + G E + +M G++P++ ++S++ AC R + G + HG+
Sbjct: 140 SWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGF 199
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCEN------ 173
+ ++G +S+ +V ++ +Y G + + K+F + +N VS +++VGY +
Sbjct: 200 VAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEV 259
Query: 174 ---------------------------------------GNVAEARELFDQMEHLGVQRG 194
GNV A +FDQM +R
Sbjct: 260 IDIYKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMS----ERD 315
Query: 195 IISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIH 254
ISWNS+ + Y N +E+F +F L+ R E S T ++L ++ + G+ IH
Sbjct: 316 TISWNSIAAAYAQNGHIEESFRIF-SLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIH 374
Query: 255 ALAIALGLQSDTFVGGALVEMYCRY-----QDLVAAQMAFDEIENIENLLGKMKEDGFEP 309
L + +G S V L+ MY +LV QM ++ + +L+ DG
Sbjct: 375 GLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDG--- 431
Query: 310 NVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHI 369
+ +A+ L M+S + + T L+AC + E+G+ +H + G + I
Sbjct: 432 --RSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQII 489
Query: 370 GTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGF 429
G ALV MY K G + +R ++ D+V+ NA++ YA + +A F+ + G
Sbjct: 490 GNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGV 549
Query: 430 RPDHISFLSALSACVHAGS-IKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAY 488
++I+ +S LSAC+ G ++ G + + ++ + ++ G+L +
Sbjct: 550 SSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQ 609
Query: 489 EFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
+ + + + W A+L HG+ E
Sbjct: 610 DLFNGLD-NRNIITWNAMLAANAHHGHGE 637
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 91/410 (22%), Positives = 164/410 (40%), Gaps = 73/410 (17%)
Query: 111 SLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGY 170
+ G+ H + + N L+++Y + G + A +F ++NEVS NT++ G
Sbjct: 89 TTGRAVHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGI 148
Query: 171 CENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPT 230
G E E F +M L GI+P+
Sbjct: 149 VRVGLYLEGMEFFRKMCDL------------------------------------GIKPS 172
Query: 231 SFTFGSVLIACADMNSL-RKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAF 289
SF S++ AC S+ R+G ++H GL SD +V A++ +Y Y + ++ F
Sbjct: 173 SFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVF 232
Query: 290 DEIENIENLLGKMKEDGFEPNVYTWNAMQL-FSEMLSLDLTPDIYTVGIILSACSSLATM 348
+E+ + NV +W ++ + +S+ + DIY
Sbjct: 233 EEMP--------------DRNVVSWTSLMVGYSDKGEPEEVIDIYK------------DE 266
Query: 349 ERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAY 408
G+Q+ ++ G +S + + +L+ M G++ +A + ++S D +S N++ AY
Sbjct: 267 SLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAY 326
Query: 409 AMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSL 468
A +GH +E F + + + + LS H K G L+ VK
Sbjct: 327 AQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLV----VKMGF 382
Query: 469 KHYTCMVDLLSR----AGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
C+ + L R AG EA K++P D + W +L+ V+ G
Sbjct: 383 DSVVCVCNTLLRMYAGAGRSVEANLVFKQMP-TKDLISWNSLMASFVNDG 431
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 78/176 (44%), Gaps = 2/176 (1%)
Query: 343 SSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQN 402
S + G+ VHA ++ V L++MY K G +K AR + + + VS N
Sbjct: 83 SQITIETTGRAVHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVSWN 142
Query: 403 AMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSI-KTGSEFFDLMAY 461
M++ G EG+ FR++ G +P S ++AC +GS+ + G + +A
Sbjct: 143 TMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAK 202
Query: 462 YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
+ + T ++ L G + + + +++P + V W +L+ G G E
Sbjct: 203 SGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMP-DRNVVSWTSLMVGYSDKGEPE 257
>gi|413937268|gb|AFW71819.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 830
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 187/623 (30%), Positives = 312/623 (50%), Gaps = 102/623 (16%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
N+V+W++++ G+ Q G + + + FRM+AEG+ PN T SSVL A + LG+ H
Sbjct: 121 NVVTWTSLLTGYIQAGVLLDVMSLFFRMRAEGVWPNPFTFSSVLSMVASQGMVDLGQHVH 180
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
+ G S FV N L+++Y +CG + A +F + ++ VS NT++ G NG
Sbjct: 181 AQSIKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCRMETRDMVSWNTLMAGLVLNGRDL 240
Query: 178 EARELFD----------------------QMEHLGVQR---------------------- 193
EA +LF ++HLG+ R
Sbjct: 241 EALQLFHDSRSSITMLTESTYSTVINLCANLKHLGLARQLHSSVLKHGFHSYGNVMTALM 300
Query: 194 -----------------------GIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPT 230
++SW +MI G + N A ++F + DG+ P
Sbjct: 301 DAYNKAGQLDKALDVFLLMSGSQNVVSWTAMIDGCIQNGDIPLAAALFSRM-REDGVAPN 359
Query: 231 SFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFD 290
T+ ++L ++ +IHA I + VG AL+ Y L + + A
Sbjct: 360 DLTYSTILT----VSEASFPPQIHAQVIKTNYECTPTVGTALM---VSYSKLCSTEEALS 412
Query: 291 EIENIENLLGKMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVG 336
+ I+ + +V +W+AM F +M L P+ +T+
Sbjct: 413 IFKMID-----------QKDVVSWSAMLTCYAQAGDCNGATNAFIKMTMHGLKPNEFTIS 461
Query: 337 IILSACSSLAT-MERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST 395
+ AC+S A ++ G+Q HA +I+ + + +ALV MYA+ GS+++A+ ++R +
Sbjct: 462 SAIDACASPAAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIENAQCVFERQTD 521
Query: 396 PDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEF 455
DL+S N+ML+ YA HG+ ++ + FR++ G D ++FLS + C HAG ++ G ++
Sbjct: 522 RDLLSWNSMLSGYAQHGYSQKALDVFRQMEVEGIDMDGLTFLSVIMGCAHAGLVEEGQQY 581
Query: 456 FDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
FDLM Y + P++ HY CMVDL SRAG+L E I+ +P +W ALLG C H
Sbjct: 582 FDLMVRDYGITPTMDHYACMVDLYSRAGKLDETMSLIEGMPFPAGPTIWRALLGACRVHK 641
Query: 515 NLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWI 574
N+E G++AA++L+ LEP ++ YV+L+N+++ AG+W + R+ M +++ K GCSWI
Sbjct: 642 NVELGKLAAEKLLSLEPLDSATYVLLSNIYSAAGKWKEKDEVRKLMDTKKVRKEAGCSWI 701
Query: 575 EDRDEIHKFRASDRSHDRSEEIY 597
+ ++++H F ASD+SH SE+IY
Sbjct: 702 QIKNKVHFFIASDKSHPLSEQIY 724
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 106/447 (23%), Positives = 178/447 (39%), Gaps = 100/447 (22%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG +++A+ VF M RD VSWN+++ NG LEAL+ S
Sbjct: 201 MYAKCGLVEEARVVFCRMETRDMVSWNTLMAGLVLNGRDLEALQLFHDSRS--------- 251
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+I ML T S+V+ CA L+ L L ++ H +
Sbjct: 252 -----------------SITML----------TESTYSTVINLCANLKHLGLARQLHSSV 284
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFS-IKNEVSCNTIIVGYCENGNVAEA 179
++GF S V+ L+D Y + G + AL +F S +N VS +I G +NG++ A
Sbjct: 285 LKHGFHSYGNVMTALMDAYNKAGQLDKALDVFLLMSGSQNVVSWTAMIDGCIQNGDIPLA 344
Query: 180 RELFDQMEHLGVQRGIISWNSMIS-------------------------------GYVDN 208
LF +M GV ++++++++ Y
Sbjct: 345 AALFSRMREDGVAPNDLTYSTILTVSEASFPPQIHAQVIKTNYECTPTVGTALMVSYSKL 404
Query: 209 SLYDEAFSMFRDLLMRD------------------------------GIEPTSFTFGSVL 238
+EA S+F+ + +D G++P FT S +
Sbjct: 405 CSTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDCNGATNAFIKMTMHGLKPNEFTISSAI 464
Query: 239 IACADMNS-LRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
ACA + + G++ HA++I V ALV MY R + AQ F+ + +
Sbjct: 465 DACASPAAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIENAQCVFERQTDRDL 524
Query: 298 LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAY 357
L G+ + Y+ A+ +F +M + D T ++ C+ +E G+Q
Sbjct: 525 LSWNSMLSGYAQHGYSQKALDVFRQMEVEGIDMDGLTFLSVIMGCAHAGLVEEGQQYFDL 584
Query: 358 AIR-CGYDSDVHIGTALVDMYAKCGSL 383
+R G + +VD+Y++ G L
Sbjct: 585 MVRDYGITPTMDHYACMVDLYSRAGKL 611
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 111/471 (23%), Positives = 193/471 (40%), Gaps = 63/471 (13%)
Query: 47 ERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACAR 106
+R + TP + +S GF D L + +G L ++ C
Sbjct: 12 KRSTKFPTRTPWTMPFSTTWQGFVHQALDH----FLDAHRRQGRCVGGGALLGIIKICGS 67
Query: 107 LQKLSLGKEFHGYITRNGFMSNPFVV-NGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNT 165
+ LGK+ H R G V LVD+Y +L
Sbjct: 68 VPDRVLGKQLHALCVRCGHDHGDIRVGTSLVDMYMNWHSVL------------------- 108
Query: 166 IIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMR- 224
+ R++F+ M ++R +++W S+++GY+ + + S+F MR
Sbjct: 109 ------------DGRKVFEGM----LKRNVVTWTSLLTGYIQAGVLLDVMSLF--FRMRA 150
Query: 225 DGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVA 284
+G+ P FTF SVL A + G+ +HA +I G S FV +L+ MY + +
Sbjct: 151 EGVWPNPFTFSSVLSMVASQGMVDLGQHVHAQSIKFGCCSTVFVCNSLMNMYAKCGLVEE 210
Query: 285 AQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSS 344
A++ F +E + + G N A+QLF + S T +++ C++
Sbjct: 211 ARVVFCRMETRDMVSWNTLMAGLVLNGRDLEALQLFHDSRSSITMLTESTYSTVINLCAN 270
Query: 345 LATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNA 403
L + +Q+H+ ++ G+ S ++ TAL+D Y K G L A + +S + ++VS A
Sbjct: 271 LKHLGLARQLHSSVLKHGFHSYGNVMTALMDAYNKAGQLDKALDVFLLMSGSQNVVSWTA 330
Query: 404 MLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSAC-------VHAGSIKTGSEFF 456
M+ +G A F R+ G P+ +++ + L+ +HA IKT
Sbjct: 331 MIDGCIQNGDIPLAAALFSRMREDGVAPNDLTYSTILTVSEASFPPQIHAQVIKTN---- 386
Query: 457 DLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALL 507
Y+ P++ T ++ S+ EA K I D V W A+L
Sbjct: 387 -----YECTPTVG--TALMVSYSKLCSTEEALSIFKMIDQ-KDVVSWSAML 429
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 3/210 (1%)
Query: 338 ILSACSSLATMERGKQVHAYAIRCGYD-SDVHIGTALVDMYAKCGSLKHARLAYKRISTP 396
I+ C S+ GKQ+HA +RCG+D D+ +GT+LVDMY S+ R ++ +
Sbjct: 61 IIKICGSVPDRVLGKQLHALCVRCGHDHGDIRVGTSLVDMYMNWHSVLDGRKVFEGMLKR 120
Query: 397 DLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFF 456
++V+ ++LT Y G + ++ F R+ A G P+ +F S LS G + G
Sbjct: 121 NVVTWTSLLTGYIQAGVLLDVMSLFFRMRAEGVWPNPFTFSSVLSMVASQGMVDLGQHVH 180
Query: 457 DLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG-N 515
+ ++ ++++ ++ G + EA ++ D V W L+ G V +G +
Sbjct: 181 AQSIKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCRME-TRDMVSWNTLMAGLVLNGRD 239
Query: 516 LEFGQIAADRLIELEPNNTGNYVMLANLFA 545
LE Q+ D + Y + NL A
Sbjct: 240 LEALQLFHDSRSSITMLTESTYSTVINLCA 269
>gi|449531466|ref|XP_004172707.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like, partial [Cucumis sativus]
Length = 610
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 177/560 (31%), Positives = 284/560 (50%), Gaps = 74/560 (13%)
Query: 57 PNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEF 116
P + W+A+ G+ N + E + + +M++ + PN T VL +CA++ G+E
Sbjct: 86 PKVELWNAISRGYFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLKSCAKIGAFVEGEEI 145
Query: 117 HGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNV 176
H + + G N FV L+DVY + SA K+F +N V+ ++I GY V
Sbjct: 146 HCEVIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTSMISGYILCNRV 205
Query: 177 AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGS 236
A AR LFD L +R ++ WN M+SGY++ A +F + RD +
Sbjct: 206 ALARRLFD----LAPERDVVLWNIMVSGYIEIGDMKAARKLFDTMPYRDTM--------- 252
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
N++ G Y D+ A + F+E+
Sbjct: 253 ------SWNTMLNG-------------------------YANNGDVEACEQLFEEMP--- 278
Query: 297 NLLGKMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLT-PDIYTVGIILSA 341
E NV++WN + + F ML L P+ T+ +LSA
Sbjct: 279 -----------ERNVFSWNGLIGGYAHNGCFFEVLRCFKRMLIDGLVVPNDATLVTVLSA 327
Query: 342 CSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQ 401
C+ L ++ GK VH YA G+ +++G AL+DMY+KCG +++A ++ + DL++
Sbjct: 328 CARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGLIENAMEVFESMDLKDLITW 387
Query: 402 NAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY 461
N+M+ A HG G + + F ++ +G +PD I+F+ L +C H G ++ G+ +F+ M
Sbjct: 388 NSMICGLATHGCGADALTLFHQMKINGEKPDGITFIGVLCSCTHLGLVEEGTSYFNSMVN 447
Query: 462 -YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQ 520
Y + P ++HY CMVDL RAG L A EF+K++PM D+V+W ALLG C + N++ +
Sbjct: 448 EYSIAPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAALLGACRIYKNIDLAE 507
Query: 521 IAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEI 580
+A +LI LEP N NYV+L+N++ GRW D+AR + M+D K PGCS IE D +
Sbjct: 508 LALQKLIVLEPKNPANYVLLSNIYGDLGRWKDVARLKILMRDTGSKKLPGCSLIEVNDSV 567
Query: 581 HKFRASDRSHDRSEEIYTII 600
+F + D H +S+EIY ++
Sbjct: 568 VEFYSLDERHSQSKEIYGVL 587
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 149/296 (50%), Gaps = 9/296 (3%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y + G + A+K+F MP RD +SWN+++ A NG V + E M N+ S
Sbjct: 230 YIEIGDMKAARKLFDTMPYRDTMSWNTMLNGYANNGDVEACEQLFEEMPE-----RNVFS 284
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLE-PNARTLSSVLPACARLQKLSLGKEFHGYI 120
W+ +IGG+ NG E + RM +GL PN TL +VL ACARL L LGK H Y
Sbjct: 285 WNGLIGGYAHNGCFFEVLRCFKRMLIDGLVVPNDATLVTVLSACARLGALDLGKWVHVYA 344
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
GF + +V N L+D+Y +CG + +A+++F +K+ ++ N++I G +G A+A
Sbjct: 345 ATIGFKGSIYVGNALIDMYSKCGLIENAMEVFESMDLKDLITWNSMICGLATHGCGADAL 404
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LF QM+ G + I++ ++ L +E S F ++ I P +G ++
Sbjct: 405 TLFHQMKINGEKPDGITFIGVLCSCTHLGLVEEGTSYFNSMVNEYSIAPQIEHYGCMVDL 464
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
L + E + +++D + AL+ Y+++ A++A ++ +E
Sbjct: 465 FGRAGLLDRAIE---FVKRMPMEADAVIWAALLGACRIYKNIDLAELALQKLIVLE 517
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/434 (24%), Positives = 185/434 (42%), Gaps = 50/434 (11%)
Query: 11 AKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVI---- 66
A+ +F P+ WN++ N E + +M S+D PN ++ V+
Sbjct: 76 ARHLFDHFPDPKVELWNAISRGYFHNAFYREVVFLFGKMKSMDVR-PNCFTFPLVLKSCA 134
Query: 67 -----------------GGFTQNGY----------DEEAIGMLFRMQAEGLEPNARTLSS 99
GG N + AIG +++ LE N +S
Sbjct: 135 KIGAFVEGEEIHCEVIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTS 194
Query: 100 VLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKN 159
++ +++L + + +V+G +++ GDM +A K+F ++
Sbjct: 195 MISGYILCNRVALARRLFDLAPERDVVLWNIMVSGYIEI----GDMKAARKLFDTMPYRD 250
Query: 160 EVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFR 219
+S NT++ GY NG+V +LF++M +R + SWN +I GY N + E F+
Sbjct: 251 TMSWNTMLNGYANNGDVEACEQLFEEMP----ERNVFSWNGLIGGYAHNGCFFEVLRCFK 306
Query: 220 DLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRY 279
+L+ + P T +VL ACA + +L GK +H A +G + +VG AL++MY +
Sbjct: 307 RMLIDGLVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKC 366
Query: 280 QDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIIL 339
+ A F+ ++ + + G + +A+ LF +M PD T +L
Sbjct: 367 GLIENAMEVFESMDLKDLITWNSMICGLATHGCGADALTLFHQMKINGEKPDGITFIGVL 426
Query: 340 SACSSLATMERGKQ-----VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS 394
+C+ L +E G V+ Y+I + H G +VD++ + G L A KR+
Sbjct: 427 CSCTHLGLVEEGTSYFNSMVNEYSIAPQIE---HYG-CMVDLFGRAGLLDRAIEFVKRMP 482
Query: 395 T-PDLVSQNAMLTA 407
D V A+L A
Sbjct: 483 MEADAVIWAALLGA 496
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/281 (20%), Positives = 128/281 (45%), Gaps = 12/281 (4%)
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
F S+L +C + L+K + A I G Q + +V +V + + + A+ FD
Sbjct: 28 FISLLRSCKTVALLQK---VQAQIITHGFQYNGYVAPNVVTSWVGLKQMAHARHLFDHFP 84
Query: 294 NIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ 353
+ + L G+ N + + LF +M S+D+ P+ +T ++L +C+ + G++
Sbjct: 85 DPKVELWNAISRGYFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLKSCAKIGAFVEGEE 144
Query: 354 VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGH 413
+H I+ G + + + T L+D+Y+ ++ A + + ++V+ +M++ Y +
Sbjct: 145 IHCEVIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTSMISGYILCNR 204
Query: 414 GKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTC 473
+A RR+ D + + +S + G +K + FD M Y D +
Sbjct: 205 ----VALARRLFDLAPERDVVLWNIMVSGYIEIGDMKAARKLFDTMPYRDTMS----WNT 256
Query: 474 MVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
M++ + G++ + +++P + W L+GG +G
Sbjct: 257 MLNGYANNGDVEACEQLFEEMP-ERNVFSWNGLIGGYAHNG 296
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG +++A +VF+ M +D ++WNS++ A +G +AL +M ++ E P+ +
Sbjct: 362 MYSKCGLIENAMEVFESMDLKDLITWNSMICGLATHGCGADALTLFHQM-KINGEKPDGI 420
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE 88
++ V+ T G EE M E
Sbjct: 421 TFIGVLCSCTHLGLVEEGTSYFNSMVNE 448
>gi|356566136|ref|XP_003551291.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Glycine max]
Length = 733
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 166/546 (30%), Positives = 283/546 (51%), Gaps = 37/546 (6%)
Query: 56 TPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKE 115
T N+VSW+A+I G GY+ E + M + ++ T + L A A L GK
Sbjct: 187 TRNVVSWTAIIAGLVHAGYNMEGLLYFSEMWRSKVGYDSHTFAIALKASADSSLLHHGKA 246
Query: 116 FHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGN 175
H + GF + FV+N L +Y +CG +++F K + +
Sbjct: 247 IHTQTIKQGFDESSFVINTLATMYNKCGKPDYVMRLFEKMRMPD---------------- 290
Query: 176 VAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFG 235
++SW ++IS YV + A F+ + + + P +TF
Sbjct: 291 -------------------VVSWTTLISTYVQMGEEEHAVEAFKRM-RKSYVSPNKYTFA 330
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
+V+ +CA++ + + G++IH + LGL + V +++ +Y + L +A + F I
Sbjct: 331 AVISSCANLAAAKWGEQIHGHVLRLGLVNALSVANSIITLYSKCGLLKSASLVFHGITRK 390
Query: 296 ENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVH 355
+ + + Y A S M P+ + + +LS C S+A +E+GKQVH
Sbjct: 391 DIISWSTIISVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVH 450
Query: 356 AYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGK 415
A+ + G D + + +A++ MY+KCGS++ A + + D++S AM+ YA HG+ +
Sbjct: 451 AHLLCIGIDHEAMVHSAIISMYSKCGSVQEASKIFNGMKINDIISWTAMINGYAEHGYSQ 510
Query: 416 EGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCM 474
E I F +I + G +PD++ F+ L+AC HAG + G +F LM Y + PS +HY C+
Sbjct: 511 EAINLFEKISSVGLKPDYVMFIGVLTACNHAGMVDLGFYYFMLMTNVYRISPSKEHYGCL 570
Query: 475 VDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNT 534
+DLL RAG L EA I+ +P D V+W LL C HG+++ G+ A++L++L+PN+
Sbjct: 571 IDLLCRAGRLSEAEHIIRSMPFHTDDVVWSTLLRACRVHGDVDRGRWTAEQLLQLDPNSA 630
Query: 535 GNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSE 594
G ++ LAN++A GRW + A R+ MK + + K G SW+ D+++ F A D++H +SE
Sbjct: 631 GTHITLANIYAAKGRWKEAAHIRKLMKSKGVIKERGWSWVNVNDQLNAFVAGDQAHPQSE 690
Query: 595 EIYTII 600
I T++
Sbjct: 691 HITTVL 696
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 159/353 (45%), Gaps = 5/353 (1%)
Query: 155 FSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEA 214
+S+ N + N+ + + G + +AR +FD+M H R ISW ++I+GYV+ S EA
Sbjct: 52 YSVHNMLELNSELKQLVKQGQLCKARYMFDKMTH----RDEISWTTLIAGYVNASDSYEA 107
Query: 215 FSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVE 274
+F ++ + G + F L ACA ++ G+ +H ++ GL FV AL++
Sbjct: 108 LILFSNMWVHPGPQRDQFMISVALKACALGVNICFGELLHGFSVKSGLIHSVFVSSALID 167
Query: 275 MYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYT 334
MY + + F+++ + G Y + FSEM + D +T
Sbjct: 168 MYMKVGKIEQGCRVFEKMMTRNVVSWTAIIAGLVHAGYNMEGLLYFSEMWRSKVGYDSHT 227
Query: 335 VGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS 394
I L A + + + GK +H I+ G+D + L MY KCG + ++++
Sbjct: 228 FAIALKASADSSLLHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKPDYVMRLFEKMR 287
Query: 395 TPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSE 454
PD+VS +++ Y G + + F+R+ S P+ +F + +S+C + + K G +
Sbjct: 288 MPDVVSWTTLISTYVQMGEEEHAVEAFKRMRKSYVSPNKYTFAAVISSCANLAAAKWGEQ 347
Query: 455 FFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALL 507
+ + +L ++ L S+ G L A I D + W ++
Sbjct: 348 IHGHVLRLGLVNALSVANSIITLYSKCGLLKSASLVFHGIT-RKDIISWSTII 399
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 100/418 (23%), Positives = 175/418 (41%), Gaps = 82/418 (19%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG D ++F+ M D VSW ++++ G A+E +R
Sbjct: 269 MYNKCGKPDYVMRLFEKMRMPDVVSWTTLISTYVQMGEEEHAVEAFKR------------ 316
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
M+ + PN T ++V+ +CA L G++ HG++
Sbjct: 317 ------------------------MRKSYVSPNKYTFAAVISSCANLAAAKWGEQIHGHV 352
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R G ++ V N ++ +Y +CG + SA +F + K+ +S +TII Y + G A+
Sbjct: 353 LRLGLVNALSVANSIITLYSKCGLLKSASLVFHGITRKDIISWSTIISVYSQGG---YAK 409
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
E FD + SW + R+G +P F SVL
Sbjct: 410 EAFDYL----------SW-----------------------MRREGPKPNEFALSSVLSV 436
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C M L +GK++HA + +G+ + V A++ MY + + A F+ ++ + +
Sbjct: 437 CGSMALLEQGKQVHAHLLCIGIDHEAMVHSAIISMYSKCGSVQEASKIFNGMKINDIISW 496
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG-----KQVH 355
+G+ + Y+ A+ LF ++ S+ L PD +L+AC+ ++ G +
Sbjct: 497 TAMINGYAEHGYSQEAINLFEKISSVGLKPDYVMFIGVLTACNHAGMVDLGFYYFMLMTN 556
Query: 356 AYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNAMLTAYAMHG 412
Y I S H G L+D+ + G L A + + D V + +L A +HG
Sbjct: 557 VYRIS---PSKEHYG-CLIDLLCRAGRLSEAEHIIRSMPFHTDDVVWSTLLRACRVHG 610
>gi|147805932|emb|CAN74403.1| hypothetical protein VITISV_043633 [Vitis vinifera]
Length = 841
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 191/602 (31%), Positives = 312/602 (51%), Gaps = 99/602 (16%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY GSL+ + ++F+ +P RD WNS+
Sbjct: 306 MYSNNGSLESSHQLFESVPNRDAPLWNSM------------------------------- 334
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQK-LSLGKEFHGY 119
I + G EEA+ + RMQ+EG++ + RT+ +L C L L GK H +
Sbjct: 335 -----ISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHAH 389
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ ++G + + N L+ +Y E++C V
Sbjct: 390 VIKSGMRIDASLGNALLSMY-------------------TELNC------------VESV 418
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDG-IEPTSFTFGSVL 238
+++FD+M+ GV IISWN+MI N+L +A +F MR+ I+P S+T S+L
Sbjct: 419 QKIFDRMK--GVD--IISWNTMILALARNTLRAQACELFER--MRESEIKPNSYTIISIL 472
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
AC D+ L G+ IH + ++ + + AL +MY D A+ F
Sbjct: 473 AACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALADMYMNCGDEATARDLF--------- 523
Query: 299 LGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYA 358
E + ++ +WNAM +E P+ T+ +LS+ + LAT+ +G+ +HAY
Sbjct: 524 -----EGCPDRDLISWNAMIXKAE-------PNSVTIINVLSSFTHLATLPQGQSLHAYV 571
Query: 359 IRCGYDS--DVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKE 416
R G+ D+ + A + MYA+CGSL+ A +K + +++S NAM+ Y M+G G +
Sbjct: 572 TRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLPKRNIISWNAMIAGYGMNGRGSD 631
Query: 417 GIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMV 475
+ F ++L GFRP+ ++F+S LSAC H+G I+ G + F M ++V P L HY+C+V
Sbjct: 632 AMLAFSQMLEDGFRPNGVTFVSVLSACSHSGFIEMGLQLFHSMVQDFNVTPELVHYSCIV 691
Query: 476 DLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTG 535
DLL+R G + EA EFI +P+ PD+ +W ALL C ++ + + + ++L +LEP N G
Sbjct: 692 DLLARGGCIDEAREFIDSMPIEPDASVWRALLSSCRAYSDAKQAKTIFEKLDKLEPMNAG 751
Query: 536 NYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEE 595
NYV+L+N++A AG W ++ R R +K++ + K PG SWI ++++H F A DRSH +S++
Sbjct: 752 NYVLLSNVYATAGLWLEVRRIRTWLKEKGLRKPPGISWIIVKNQVHCFSAGDRSHPQSDK 811
Query: 596 IY 597
IY
Sbjct: 812 IY 813
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 142/508 (27%), Positives = 223/508 (43%), Gaps = 76/508 (14%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y KCG ++DA+ VF M +RD V WN
Sbjct: 105 YCKCGFVEDARCVFDAMSDRDVVLWN---------------------------------- 130
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
A++ G+ G EEA+ ++ M E L PN+RT+ ++L AC +L LG+ HGY
Sbjct: 131 --AMVYGYVGWGCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCL 188
Query: 122 RNG-FMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
RNG F SNP V L+ Y R + L
Sbjct: 189 RNGMFDSNPHVATALIGFYLRFDMRVLPL------------------------------- 217
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LFD M V R I+SWN+MISGY D Y +A +F +L+ D ++ T + A
Sbjct: 218 -LFDLM----VVRNIVSWNAMISGYYDVGDYFKALELFVQMLV-DEVKFDCVTMLVAVQA 271
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA++ SL+ GK+IH LAI D ++ AL+ MY L ++ F+ + N + L
Sbjct: 272 CAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNRDAPLW 331
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLAT-MERGKQVHAYAI 359
+ AM LF M S + D TV I+LS C LA+ + +GK +HA+ I
Sbjct: 332 NSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHAHVI 391
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
+ G D +G AL+ MY + ++ + + R+ D++S N M+ A A + +
Sbjct: 392 KSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMILALARNTLRAQACE 451
Query: 420 HFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLS 479
F R+ S +P+ + +S L+AC + G + + ++ + T + D+
Sbjct: 452 LFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALADMYM 511
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALL 507
G+ A + + P D + W A++
Sbjct: 512 NCGDEATARDLFEGCP-DRDLISWNAMI 538
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 128/501 (25%), Positives = 225/501 (44%), Gaps = 85/501 (16%)
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W++VI D+ + +M++ G+ PN TL VL ACA + GK H I
Sbjct: 28 WNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERGKSIHRSIQ 87
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
M + V +VD Y +CG V +AR
Sbjct: 88 GTDLMDDVRVGTAVVDFYCKCG-------------------------------FVEDARC 116
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
+FD M R ++ WN+M+ GYV Y+EA + R++ R+ + P S T ++L+AC
Sbjct: 117 VFDAMS----DRDVVLWNAMVYGYVGWGCYEEAMLLVREM-GRENLRPNSRTMVALLLAC 171
Query: 242 ADMNSLRKGKEIHALAIALGL-QSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL- 299
+ LR G+ +H + G+ S+ V AL+ Y R+ D+ + FD + + N++
Sbjct: 172 EGASELRLGRGVHGYCLRNGMFDSNPHVATALIGFYLRF-DMRVLPLLFD-LMVVRNIVS 229
Query: 300 -GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYA 358
M ++ Y + A++LF +ML ++ D T+ + + AC+ L +++ GKQ+H A
Sbjct: 230 WNAMISGYYDVGDY-FKALELFVQMLVDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLA 288
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGI 418
I+ + D++I AL++MY+ GSL+ + ++ + D N+M++AYA G +E +
Sbjct: 289 IKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAM 348
Query: 419 AHFRRILASGFRPDHISFLSALSAC------------VHAGSIKTG-------------- 452
F R+ + G + D + + LS C +HA IK+G
Sbjct: 349 DLFIRMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHAHVIKSGMRIDASLGNALLSM 408
Query: 453 ----------SEFFDLMAYYDVKPSLKHYTCMVDLLSR---AGELGEAYEFIKKIPMAPD 499
+ FD M D+ + M+ L+R + E +E +++ + P+
Sbjct: 409 YTELNCVESVQKIFDRMKGVDIIS----WNTMILALARNTLRAQACELFERMRESEIKPN 464
Query: 500 SVMWGALLGGCVSHGNLEFGQ 520
S ++L C L+FG+
Sbjct: 465 SYTIISILAACEDVTCLDFGR 485
>gi|224092360|ref|XP_002309575.1| predicted protein [Populus trichocarpa]
gi|222855551|gb|EEE93098.1| predicted protein [Populus trichocarpa]
Length = 653
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 182/603 (30%), Positives = 297/603 (49%), Gaps = 75/603 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKCG L A VF M +R N+V
Sbjct: 16 MYGKCGRLGVACDVFDRMLKR------------------------------------NVV 39
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A++ G QNG E++ + +M G++PN T S+ L AC L L +G++ H
Sbjct: 40 SWTALMCGHIQNGNPLESLLLFSKMGLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDIC 99
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ GF V N ++D+Y +CG + NE +C
Sbjct: 100 VKTGFDMVNVVGNSIIDMYSKCGRI-------------NEAAC----------------- 129
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+F+ M R +ISWN+MI+GY ++A +F+ + G FTF S L A
Sbjct: 130 -MFEVMP----VRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGF-LDEFTFTSTLKA 183
Query: 241 CADMNSLRKGKEIHALAIALGL--QSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
C+D+ ++++G +IHA I G +T V GAL+++Y + L A+ F IE +
Sbjct: 184 CSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEKHVI 243
Query: 299 LGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYA 358
G+ +M+LF ++ + D + + ++ + A +++GKQ+HA+A
Sbjct: 244 SWTALILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMHAFA 303
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGI 418
I+ D+ + +++DMY KCG + A + + +++S M+T Y HG GKE I
Sbjct: 304 IKVPSGVDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLGKEAI 363
Query: 419 AHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFD-LMAYYDVKPSLKHYTCMVDL 477
F + PD +++L+ L C H+G ++ G E+F L +Y+ +K ++HY CMVDL
Sbjct: 364 RLFDEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHYACMVDL 423
Query: 478 LSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNY 537
L RAG L EA + +P+ + +W LL C HG+LE G+ L+ L+ N NY
Sbjct: 424 LGRAGRLKEAKNLVDSMPLEANVGIWQTLLSACRVHGDLELGKEVGGILLRLDSENPVNY 483
Query: 538 VMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
VM++N++A AG W + R R+ +K +++ K G SW+E E+H F D +H +E+I+
Sbjct: 484 VMMSNIYADAGYWKECERIRELVKSKKLKKEAGRSWVEIDKEVHFFYGGDDTHPLTEKIH 543
Query: 598 TII 600
I+
Sbjct: 544 EIL 546
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 77/168 (45%), Gaps = 1/168 (0%)
Query: 362 GYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHF 421
G+ D+ + L+ MY KCG L A + R+ ++VS A++ + +G+ E + F
Sbjct: 2 GFGFDLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLF 61
Query: 422 RRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRA 481
++ SG +P+ +F + L AC + G + D+ ++D+ S+
Sbjct: 62 SKMGLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKC 121
Query: 482 GELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIEL 529
G + EA + +P+ + + W A++ G G E + ++ E+
Sbjct: 122 GRINEAACMFEVMPV-RNLISWNAMIAGYTVAGFCEKALVLFQKMQEV 168
>gi|50251760|dbj|BAD27693.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|222623393|gb|EEE57525.1| hypothetical protein OsJ_07836 [Oryza sativa Japonica Group]
Length = 667
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 177/525 (33%), Positives = 275/525 (52%), Gaps = 44/525 (8%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
+VSW+AVI G +NGY E A+ + M A+G+ + T+ SVLPACA+ + L+ G+ H
Sbjct: 173 TVVSWNAVIAGCVKNGYAERALEVFGEMAADGVGIDRATVVSVLPACAQAKDLNTGRAVH 232
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
+ G V N L+D+Y +C +
Sbjct: 233 RLVEDKGLGDYVAVKNALIDMYGKCRSL-------------------------------E 261
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
+AR +FD +H + ++SW +MI YV N EA S+ +LM P T +
Sbjct: 262 DARRVFDHCKH---DKDVVSWTAMIGAYVLNDRAFEAISLGCQMLMSGAAWPNGVTMVYL 318
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDE----IE 293
L ACA M S + K HAL I LGL+SD V AL++ Y R + ++ + E
Sbjct: 319 LSACASMPSGKHAKCTHALCIRLGLKSDIAVETALIDAYARCGKMKLMRLTLERGSWRAE 378
Query: 294 NIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ 353
L G E A++LF M++ + PD T+ IL A + A ++ GK
Sbjct: 379 TWNAALSGYTVSGREKK-----AIELFKRMIAESVRPDSATMASILPAYAESADLKEGKN 433
Query: 354 VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGH 413
+H + + G+ I T L+D+Y+K G L A ++ + D+V+ ++ Y +HGH
Sbjct: 434 IHCFLLTLGFLRSTEIATGLIDVYSKAGDLDAAWALFQWLPEKDVVAWTTIIAGYGIHGH 493
Query: 414 GKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFF-DLMAYYDVKPSLKHYT 472
+ I + R++ SG +P+ ++ + L AC HAG I G + F D+ + + P+ +HY+
Sbjct: 494 ARTAILLYDRMVESGGKPNTVTIATLLYACSHAGMIDEGIKVFKDMRNVHGLMPNGEHYS 553
Query: 473 CMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPN 532
C+VD+L RAG + EA+ I+ +P P + +WGALLG CV H N+EFG++AA RL +L+P
Sbjct: 554 CLVDMLGRAGRIEEAHRLIQDMPFEPSTSVWGALLGACVLHKNVEFGEVAAKRLFQLDPE 613
Query: 533 NTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDR 577
NTG+YV+L N++A A RW D+ R+ M +R + K PG S +E R
Sbjct: 614 NTGSYVLLGNIYAAADRWRDVQDVRRMMVERGLLKEPGSSLVEAR 658
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 138/491 (28%), Positives = 219/491 (44%), Gaps = 47/491 (9%)
Query: 57 PNLVSWS-AVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKE 115
P VS+S +++ +T G EA+ + M+A + T ACA L+ G+
Sbjct: 74 PPPVSFSNSLLRSYTGLGCHREALAVYSAMRAF----DHLTFPFAAKACAGLRLGRHGRA 129
Query: 116 FHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGN 175
H GF + +V N L+ +Y CGD+ +A +F + VS N +I G +NG
Sbjct: 130 VHCRALAAGFGGDTYVQNALISMYMSCGDVGAAEAVFGAMRNRTVVSWNAVIAGCVKNGY 189
Query: 176 VAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFG 235
A E+F +M DG+ T
Sbjct: 190 AERALEVFGEMA------------------------------------ADGVGIDRATVV 213
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
SVL ACA L G+ +H L GL V AL++MY + + L A+ FD ++
Sbjct: 214 SVLPACAQAKDLNTGRAVHRLVEDKGLGDYVAVKNALIDMYGKCRSLEDARRVFDHCKHD 273
Query: 296 ENLLGKMKEDG-FEPNVYTWNAMQLFSEML-SLDLTPDIYTVGIILSACSSLATMERGKQ 353
++++ G + N + A+ L +ML S P+ T+ +LSAC+S+ + + K
Sbjct: 274 KDVVSWTAMIGAYVLNDRAFEAISLGCQMLMSGAAWPNGVTMVYLLSACASMPSGKHAKC 333
Query: 354 VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGH 413
HA IR G SD+ + TAL+D YA+CG +K RL +R S + NA L+ Y + G
Sbjct: 334 THALCIRLGLKSDIAVETALIDAYARCGKMKLMRLTLERGSW-RAETWNAALSGYTVSGR 392
Query: 414 GKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTC 473
K+ I F+R++A RPD + S L A + +K G + S + T
Sbjct: 393 EKKAIELFKRMIAESVRPDSATMASILPAYAESADLKEGKNIHCFLLTLGFLRSTEIATG 452
Query: 474 MVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNN 533
++D+ S+AG+L A+ + +P D V W ++ G HG+ + DR++ E
Sbjct: 453 LIDVYSKAGDLDAAWALFQWLP-EKDVVAWTTIIAGYGIHGHARTAILLYDRMV--ESGG 509
Query: 534 TGNYVMLANLF 544
N V +A L
Sbjct: 510 KPNTVTIATLL 520
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/318 (28%), Positives = 143/318 (44%), Gaps = 12/318 (3%)
Query: 170 YCENGNVAEARELFDQMEHLGVQRGIISW-NSMISGYVDNSLYDEAFSMFRDLLMRDGIE 228
YC G + A L QM Q +S+ NS++ Y + EA +++ + D
Sbjct: 55 YCACGRPSSAHNLLAQMP----QPPPVSFSNSLLRSYTGLGCHREALAVYSAMRAFD--- 107
Query: 229 PTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMA 288
TF ACA + R G+ +H A+A G DT+V AL+ MY D+ AA+
Sbjct: 108 --HLTFPFAAKACAGLRLGRHGRAVHCRALAAGFGGDTYVQNALISMYMSCGDVGAAEAV 165
Query: 289 FDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATM 348
F + N + G N Y A+++F EM + + D TV +L AC+ +
Sbjct: 166 FGAMRNRTVVSWNAVIAGCVKNGYAERALEVFGEMAADGVGIDRATVVSVLPACAQAKDL 225
Query: 349 ERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNAMLTA 407
G+ VH G V + AL+DMY KC SL+ AR + D+VS AM+ A
Sbjct: 226 NTGRAVHRLVEDKGLGDYVAVKNALIDMYGKCRSLEDARRVFDHCKHDKDVVSWTAMIGA 285
Query: 408 YAMHGHGKEGIAHFRRILASGFR-PDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKP 466
Y ++ E I+ ++L SG P+ ++ + LSAC S K L +K
Sbjct: 286 YVLNDRAFEAISLGCQMLMSGAAWPNGVTMVYLLSACASMPSGKHAKCTHALCIRLGLKS 345
Query: 467 SLKHYTCMVDLLSRAGEL 484
+ T ++D +R G++
Sbjct: 346 DIAVETALIDAYARCGKM 363
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 106/434 (24%), Positives = 167/434 (38%), Gaps = 87/434 (20%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKC SL+DA++VF C ++V
Sbjct: 253 MYGKCRSLEDARRVFD---------------------------HC--------KHDKDVV 277
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLE-PNARTLSSVLPACARLQKLSLGKEFHGY 119
SW+A+IG + N EAI + +M G PN T+ +L ACA + K H
Sbjct: 278 SWTAMIGAYVLNDRAFEAISLGCQMLMSGAAWPNGVTMVYLLSACASMPSGKHAKCTHAL 337
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
R G S+ V L+D Y RCG M + S + E + N + GY +G +A
Sbjct: 338 CIRLGLKSDIAVETALIDAYARCGKMKLMRLTLERGSWRAE-TWNAALSGYTVSGREKKA 396
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
ELF +M + + + P S T S+L
Sbjct: 397 IELFKRM------------------------------------IAESVRPDSATMASILP 420
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
A A+ L++GK IH + LG T + L+++Y + DL AA F + + +
Sbjct: 421 AYAESADLKEGKNIHCFLLTLGFLRSTEIATGLIDVYSKAGDLDAAWALFQWLPEKDVVA 480
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG-------K 352
G+ + + A+ L+ M+ P+ T+ +L ACS ++ G +
Sbjct: 481 WTTIIAGYGIHGHARTAILLYDRMVESGGKPNTVTIATLLYACSHAGMIDEGIKVFKDMR 540
Query: 353 QVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHA-RLAYKRISTPDLVSQNAMLTAYAMH 411
VH G + + LVDM + G ++ A RL P A+L A +H
Sbjct: 541 NVH------GLMPNGEHYSCLVDMLGRAGRIEEAHRLIQDMPFEPSTSVWGALLGACVLH 594
Query: 412 GHGKEGIAHFRRIL 425
+ + G +R+
Sbjct: 595 KNVEFGEVAAKRLF 608
>gi|302790389|ref|XP_002976962.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
gi|300155440|gb|EFJ22072.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
Length = 1108
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 184/602 (30%), Positives = 299/602 (49%), Gaps = 75/602 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKCGS+ +A+ VFK MP + +LV
Sbjct: 482 MYGKCGSISEAELVFKEMPL----------------------------------PSRSLV 507
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+ ++G + QN +EA G L M G+ P+A + +SVL +C Q+ + I
Sbjct: 508 TWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSCYCSQE---AQVLRMCI 564
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+G+ S + L+ ++ RC ++ +AR
Sbjct: 565 LESGYRS-ACLETALISMHGRCREL-------------------------------EQAR 592
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+F++M+H ++SW +M+S +N + E ++FR + + +G+ P FT + L
Sbjct: 593 SVFNEMDH----GDVVSWTAMVSATAENRDFKEVHNLFRRMQL-EGVIPDKFTLATTLDT 647
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C +L GK IHA +GL++D V AL+ MY D A F+ ++ + +
Sbjct: 648 CLASTTLGLGKVIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSW 707
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
+ + A+ LF +M + PD T L+ A + GK HA A
Sbjct: 708 NIMSAAYAQAGLAKEAVLLFRQMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHALAAE 767
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
G DSDV + T LV +YAKCG L A ++ +V NA++ A A HG +E +
Sbjct: 768 SGLDSDVSVATGLVKLYAKCGKLDEAMSLFRGACDWTVVLLNAIIGALAQHGFSEEAVKM 827
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTG-SEFFDLMAYYDVKPSLKHYTCMVDLLS 479
F ++ G RPD + +S +SAC HAG ++ G S F + Y+ + P+L+HY C VDLL
Sbjct: 828 FWKMQQEGVRPDVATLVSIISACGHAGMVEEGCSSFLTMKEYFGISPTLEHYACFVDLLG 887
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
RAG+L A + I+K+P ++++W +LLG C G+ E G+ A R++EL+P+N+ +V+
Sbjct: 888 RAGQLEHAEQIIRKMPFEDNTLVWTSLLGTCKLQGDAELGERCAQRILELDPHNSAAHVV 947
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTI 599
L+N++ G+W D R+KM D + +PG SW E ++H+F A DRSH +++EIY +
Sbjct: 948 LSNIYCATGKWKDADVDRKKMLDENVKNAPGMSWFEIGKQVHEFVAGDRSHPKTDEIYVV 1007
Query: 600 ID 601
+D
Sbjct: 1008 LD 1009
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 146/616 (23%), Positives = 235/616 (38%), Gaps = 137/616 (22%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGSL+DA VF +PE+D VS
Sbjct: 175 MYAKCGSLEDAIAVFLAIPEKDVVS----------------------------------- 199
Query: 61 SWSAVIGGFTQN-GYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
W+A+ G + Q + +A+ + M + L PN T + L AC L+ G H
Sbjct: 200 -WTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACTSLRD---GTWLHSL 255
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ +P N L+++Y +CGD A +F + + E+
Sbjct: 256 LHEASLGFDPLASNALINMYGKCGDWEGAYSVFKAMASRQELD----------------- 298
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
++SWN+MIS V+ + +A ++FR L + +G+ P S T ++L
Sbjct: 299 ---------------LVSWNAMISASVEAGRHGDAMAIFRRLRL-EGMRPNSVTLITILN 342
Query: 240 ACADMN-SLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
A A + H G D +G A++ MY + AA F I
Sbjct: 343 ALAASGVDFGAARGFHGRIWESGYLRDVVIGNAIISMYAKCGFFSAAWAVFRRIR----- 397
Query: 299 LGKMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSS 344
++ +V +WN M F ML + P+ + IL+ACS+
Sbjct: 398 --------WKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSN 449
Query: 345 LATMERGKQVHAYAIRCGYD-SDVHIGTALVDMYAKCGSLKHARLAYKRISTP--DLVSQ 401
++ G+++H+ + D + + T LV MY KCGS+ A L +K + P LV+
Sbjct: 450 SEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSISEAELVFKEMPLPSRSLVTW 509
Query: 402 NAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSAL--------------------- 440
N ML AYA + KE +L G PD +SF S L
Sbjct: 510 NVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSCYCSQEAQVLRMCILESGY 569
Query: 441 -SACVHAGSIKTGSEFFDLMAYYDVKPSLKH-----YTCMVDLLSRAGELGEAYEFIKKI 494
SAC+ I +L V + H +T MV + + E + +++
Sbjct: 570 RSACLETALISMHGRCRELEQARSVFNEMDHGDVVSWTAMVSATAENRDFKEVHNLFRRM 629
Query: 495 PMA---PDSVMWGALLGGCVSHGNLEFGQI--AADRLIELEPNNTGNYVMLANLFAYAGR 549
+ PD L C++ L G++ A I LE + +L N+++ G
Sbjct: 630 QLEGVIPDKFTLATTLDTCLASTTLGLGKVIHACVTEIGLEADIAVENALL-NMYSNCGD 688
Query: 550 WSDLARTRQKMKDRRM 565
W + + MK R +
Sbjct: 689 WREALSFFETMKARDL 704
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 118/460 (25%), Positives = 206/460 (44%), Gaps = 69/460 (15%)
Query: 98 SSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSI 157
+++L +C L+ GK H I G + F+ N L+++Y RCG +
Sbjct: 29 TALLQSCVDSNDLAKGKHAHELIANAGLEQHLFLGNCLINMYVRCGSL------------ 76
Query: 158 KNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSM 217
EA +F +ME +R ++SW ++IS + AF++
Sbjct: 77 -------------------EEAHAIFSKME----ERNVVSWTALISANAQCGAFARAFAL 113
Query: 218 FRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQ----SDTFVGGALV 273
FR +L+ P S+T ++L ACA+ L G+ IHA+ LGL+ + T VG A++
Sbjct: 114 FRTMLLESSAAPNSYTLVAMLNACANSRDLAIGRSIHAMIWELGLERASTTATLVGNAMI 173
Query: 274 EMYCR---YQDLVAAQMAFDEIENIE--NLLGK-MKEDGFEPNVYTWNAMQLFSEMLSLD 327
MY + +D +A +A E + + + G +E F P +A+++F EML
Sbjct: 174 NMYAKCGSLEDAIAVFLAIPEKDVVSWTAMAGAYAQERRFYP-----DALRIFREMLLQP 228
Query: 328 LTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHAR 387
L P++ T L AC+SL G +H+ D AL++MY KCG + A
Sbjct: 229 LAPNVITFITALGACTSL---RDGTWLHSLLHEASLGFDPLASNALINMYGKCGDWEGAY 285
Query: 388 LAYKRISTP---DLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACV 444
+K +++ DLVS NAM++A G + +A FRR+ G RP+ ++ ++ L+A
Sbjct: 286 SVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALA 345
Query: 445 HAG-SIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMW 503
+G F + + ++ + ++ G A+ ++I D + W
Sbjct: 346 ASGVDFGAARGFHGRIWESGYLRDVVIGNAIISMYAKCGFFSAAWAVFRRIRWKCDVISW 405
Query: 504 GALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANL 543
+LG S FG++ NT ++++LA +
Sbjct: 406 NTMLGA--SEDRKSFGKVV----------NTFHHMLLAGI 433
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 133/525 (25%), Positives = 218/525 (41%), Gaps = 94/525 (17%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +CGSL++A +F M ER N+V
Sbjct: 69 MYVRCGSLEEAHAIFSKMEER------------------------------------NVV 92
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEG-LEPNARTLSSVLPACARLQKLSLGKEFHGY 119
SW+A+I Q G A + M E PN+ TL ++L ACA + L++G+ H
Sbjct: 93 SWTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGRSIHAM 152
Query: 120 ITRNGF----MSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGN 175
I G + V N ++++Y +CG + A+ +F K+
Sbjct: 153 IWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIPEKD---------------- 196
Query: 176 VAEARELFDQMEHLGVQRGIISWNSMISGYV-DNSLYDEAFSMFRDLLMRDGIEPTSFTF 234
++SW +M Y + Y +A +FR++L++ + P TF
Sbjct: 197 -------------------VVSWTAMAGAYAQERRFYPDALRIFREMLLQP-LAPNVITF 236
Query: 235 GSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIEN 294
+ L AC SLR G +H+L L D AL+ MY + D A F + +
Sbjct: 237 ITALGAC---TSLRDGTWLHSLLHEASLGFDPLASNALINMYGKCGDWEGAYSVFKAMAS 293
Query: 295 IENL----LGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSA-CSSLATME 349
+ L M E + +AM +F + + P+ T+ IL+A +S
Sbjct: 294 RQELDLVSWNAMISASVEAGRHG-DAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFG 352
Query: 350 RGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTP-DLVSQNAMLTAY 408
+ H GY DV IG A++ MYAKCG A ++RI D++S N ML A
Sbjct: 353 AARGFHGRIWESGYLRDVVIGNAIISMYAKCGFFSAAWAVFRRIRWKCDVISWNTMLGAS 412
Query: 409 AMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYD---VK 465
+ + F +L +G P+ +SF++ L+AC ++ ++ G + L+ V+
Sbjct: 413 EDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVE 472
Query: 466 PSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDS-VMWGALLGG 509
S+ T +V + + G + EA K++P+ S V W +LG
Sbjct: 473 SSVA--TMLVSMYGKCGSISEAELVFKEMPLPSRSLVTWNVMLGA 515
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 148/346 (42%), Gaps = 40/346 (11%)
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
+ ++L +C D N L KGK H L GL+ F+G L+ MY R L A F ++E
Sbjct: 28 YTALLQSCVDSNDLAKGKHAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKME 87
Query: 294 NIENLLGKMKEDGFEPNVYTWNAM--------------QLFSEM-LSLDLTPDIYTVGII 338
E NV +W A+ LF M L P+ YT+ +
Sbjct: 88 --------------ERNVVSWTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVAM 133
Query: 339 LSACSSLATMERGKQVHAYAIRCGYD----SDVHIGTALVDMYAKCGSLKHARLAYKRIS 394
L+AC++ + G+ +HA G + + +G A+++MYAKCGSL+ A + I
Sbjct: 134 LNACANSRDLAIGRSIHAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIP 193
Query: 395 TPDLVSQNAMLTAYAMHGHG-KEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGS 453
D+VS AM AYA + + FR +L P+ I+F++AL AC S++ G+
Sbjct: 194 EKDVVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACT---SLRDGT 250
Query: 454 EFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIP--MAPDSVMWGALLGGCV 511
L+ + ++++ + G+ AY K + D V W A++ V
Sbjct: 251 WLHSLLHEASLGFDPLASNALINMYGKCGDWEGAYSVFKAMASRQELDLVSWNAMISASV 310
Query: 512 SHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTR 557
G +A R + LE + ++ L A A D R
Sbjct: 311 EAGR-HGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGAAR 355
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 89/195 (45%), Gaps = 6/195 (3%)
Query: 320 FSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAK 379
S + +D D+ +L +C + +GK H G + + +G L++MY +
Sbjct: 13 LSGAVRVDRAADLQEYTALLQSCVDSNDLAKGKHAHELIANAGLEQHLFLGNCLINMYVR 72
Query: 380 CGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRR-ILASGFRPDHISFLS 438
CGSL+ A + ++ ++VS A+++A A G A FR +L S P+ + ++
Sbjct: 73 CGSLEEAHAIFSKMEERNVVSWTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVA 132
Query: 439 ALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYT----CMVDLLSRAGELGEAYEFIKKI 494
L+AC ++ + G ++ ++ + T M+++ ++ G L +A I
Sbjct: 133 MLNACANSRDLAIGRSIHAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAI 192
Query: 495 PMAPDSVMWGALLGG 509
P D V W A+ G
Sbjct: 193 P-EKDVVSWTAMAGA 206
>gi|449451309|ref|XP_004143404.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
gi|449526377|ref|XP_004170190.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
Length = 577
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 189/557 (33%), Positives = 297/557 (53%), Gaps = 63/557 (11%)
Query: 97 LSSVLPA---CARL-------QKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDML 146
LS + P+ CARL + L +G H ++ + + F+ N L+D+Y +C M
Sbjct: 4 LSDLFPSFDHCARLFSKCIQHKHLRVGMSLHSHLIKTALSFDLFLANRLIDMYSKCNSME 63
Query: 147 SALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYV 206
+A K F I+N S NTI+ Y G ++AR++FD+M H I+S+N++IS +
Sbjct: 64 NAQKAFDDLPIRNIHSWNTILASYSRAGFFSQARKVFDEMPH----PNIVSYNTLISSFT 119
Query: 207 DNSLYDEAFSMFR------DLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIAL 260
+ LY E+ ++FR DLL D I T S+ CA + +L +++H AI +
Sbjct: 120 HHGLYVESMNIFRQMQQDFDLLALDEI-----TLVSIAGTCACLGALEFLRQVHGAAIVI 174
Query: 261 GLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE-----------NLLGKMKEDGFE- 308
GL+ + V A+V+ Y + D A+ F ++ + N ++ +D F
Sbjct: 175 GLEFNMIVCNAIVDAYGKCGDPDASYSIFSRMKERDVVTWTSMVVAYNQTSRL-DDAFRV 233
Query: 309 ------PNVYTWN--------------AMQLFSEMLSLDLTPDIYTVGIILSACSSLATM 348
NV+TW A+ LF +ML +P+ +T +LSAC+ LA +
Sbjct: 234 FSCMPVKNVHTWTALINALVKNKYSNEALDLFQQMLEEKTSPNAFTFVGVLSACADLALI 293
Query: 349 ERGKQVHAYAIRCGYD---SDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAML 405
+GK++H IR + +V++ AL+D+Y+K G +K AR+ + I D+VS N+++
Sbjct: 294 AKGKEIHGLIIRRSSELNFPNVYVCNALIDLYSKSGDVKSARMLFNLILEKDVVSWNSLI 353
Query: 406 TAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDV 464
T +A +G G+E + FR++ G RP+ ++FL+ LSAC H G G +LM +YD+
Sbjct: 354 TGFAQNGLGREALLAFRKMTEVGIRPNKVTFLAVLSACSHTGLSSEGLCILELMEKFYDI 413
Query: 465 KPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSV-MWGALLGGCVSHGNLEFGQIAA 523
+PSL+HY M+D+ R L EA + I + P V +WGA+LG C H NL+ AA
Sbjct: 414 EPSLEHYAVMIDMFGRENRLAEALDLISRAPNGSKHVGIWGAVLGACRIHENLDLAIRAA 473
Query: 524 DRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKF 583
+ L E+EP+N G YVML+N+FA A RW D R+ M++R K S IE R+ HKF
Sbjct: 474 ETLFEMEPDNAGRYVMLSNVFAAASRWMDAHNVRKLMEERGFKKEVAYSCIEIRNIRHKF 533
Query: 584 RASDRSHDRSEEIYTII 600
A D SH + EIY ++
Sbjct: 534 VARDNSHSQMGEIYELM 550
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 105/356 (29%), Positives = 181/356 (50%), Gaps = 15/356 (4%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC S+++A+K F +P R+ SWN+++ + + G +A + + M PN+V
Sbjct: 55 MYSKCNSMENAQKAFDDLPIRNIHSWNTILASYSRAGFFSQARKVFDEMPH-----PNIV 109
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEG--LEPNARTLSSVLPACARLQKLSLGKEFHG 118
S++ +I FT +G E++ + +MQ + L + TL S+ CA L L ++ HG
Sbjct: 110 SYNTLISSFTHHGLYVESMNIFRQMQQDFDLLALDEITLVSIAGTCACLGALEFLRQVHG 169
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
G N V N +VD Y +CGD ++ IFS+ ++ V+ +++V Y + + +
Sbjct: 170 AAIVIGLEFNMIVCNAIVDAYGKCGDPDASYSIFSRMKERDVVTWTSMVVAYNQTSRLDD 229
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
A +F M + + +W ++I+ V N +EA +F+ +L + P +FTF VL
Sbjct: 230 AFRVFSCMP----VKNVHTWTALINALVKNKYSNEALDLFQQML-EEKTSPNAFTFVGVL 284
Query: 239 IACADMNSLRKGKEIHALAIALGLQ---SDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
ACAD+ + KGKEIH L I + + +V AL+++Y + D+ +A+M F+ I
Sbjct: 285 SACADLALIAKGKEIHGLIIRRSSELNFPNVYVCNALIDLYSKSGDVKSARMLFNLILEK 344
Query: 296 ENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG 351
+ + GF N A+ F +M + + P+ T +LSACS G
Sbjct: 345 DVVSWNSLITGFAQNGLGREALLAFRKMTEVGIRPNKVTFLAVLSACSHTGLSSEG 400
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 116/232 (50%), Gaps = 8/232 (3%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
YGKCG D + +F M ERD V+W S+V A + +A M N+ +
Sbjct: 190 YGKCGDPDASYSIFSRMKERDVVTWTSMVVAYNQTSRLDDAFRVFSCMP-----VKNVHT 244
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W+A+I +N Y EA+ + +M E PNA T VL ACA L ++ GKE HG I
Sbjct: 245 WTALINALVKNKYSNEALDLFQQMLEEKTSPNAFTFVGVLSACADLALIAKGKEIHGLII 304
Query: 122 RNGF---MSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
R N +V N L+D+Y + GD+ SA +F+ K+ VS N++I G+ +NG E
Sbjct: 305 RRSSELNFPNVYVCNALIDLYSKSGDVKSARMLFNLILEKDVVSWNSLITGFAQNGLGRE 364
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPT 230
A F +M +G++ +++ +++S L E + + IEP+
Sbjct: 365 ALLAFRKMTEVGIRPNKVTFLAVLSACSHTGLSSEGLCILELMEKFYDIEPS 416
>gi|147789959|emb|CAN73858.1| hypothetical protein VITISV_024322 [Vitis vinifera]
Length = 1539
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 194/577 (33%), Positives = 300/577 (51%), Gaps = 47/577 (8%)
Query: 27 NSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQ 86
N +V A +G + +A E M D+ VSW+++I G QN E+A RM+
Sbjct: 899 NGLVNMYAKSGAIADACSVFELMVEKDS-----VSWNSLISGLDQNECSEDAAESFLRMR 953
Query: 87 AEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDML 146
G P+ TL S L +CA L + LG++ H + G ++ V N L+ +Y G
Sbjct: 954 RTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFT 1013
Query: 147 SALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYV 206
LK+FS +DQ +SWNS+I
Sbjct: 1014 ECLKVFSLMP-------------------------EYDQ----------VSWNSVIGALS 1038
Query: 207 DN-SLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSD 265
D+ + +A F ++ MR G + TF ++L A + ++ +IHAL + L D
Sbjct: 1039 DSEASVSQAVKYFLEM-MRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDD 1097
Query: 266 TFVGGALVEMYCRYQDLVAAQMAFDEI-ENIENLLGKMKEDGFEPNVYTWNAMQLFSEML 324
T +G AL+ Y + ++ + F + E + + G+ N AM L M+
Sbjct: 1098 TAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMM 1157
Query: 325 SLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLK 384
D +T +LSAC+S+AT+ERG +VHA IR +SDV +G+ALVDMY+KCG +
Sbjct: 1158 QKGQRLDSFTFATVLSACASVATLERGMEVHACGIRACMESDVVVGSALVDMYSKCGRID 1217
Query: 385 HARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHIS-FLSALSAC 443
+A ++ + ++ S N+M++ YA HGHG++ + F R++ G PDH++ L LSAC
Sbjct: 1218 YASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVAPLLGVLSAC 1277
Query: 444 VHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVM 502
H G ++ G E F M+ Y + P ++H++CMVDLL RAG+L E +FI +PM P+ ++
Sbjct: 1278 SHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLI 1337
Query: 503 WGALLGGCVSHG--NLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKM 560
W +LG C N E G+ AA+ L+ELEP N NYV+LAN++A +W D+A+ R M
Sbjct: 1338 WRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLANMYASGEKWEDVAKARXAM 1397
Query: 561 KDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
K+ + K GCSW+ +D +H F A D+ H + IY
Sbjct: 1398 KEAAVKKEAGCSWVTMKDGVHVFVAGDKLHPEKDXIY 1434
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 124/539 (23%), Positives = 221/539 (41%), Gaps = 91/539 (16%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACAR--LQKLSLGKE 115
NLV+W+ +I G+TQNG +EA M G PN S L AC LG +
Sbjct: 609 NLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQ 668
Query: 116 FHGYITRNGFMSNPFVVNGLVDVYRRC--------------------------------G 143
HG I++ + S+ V N L+ +Y C G
Sbjct: 669 IHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDRIGIRNSISWNSIISVYSRRG 728
Query: 144 DMLSALKIFSK-------FSIK-NEVSCNTIIVGYCEN---------------------- 173
D +SA +FS FS K NE + ++I C +
Sbjct: 729 DXVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITAACSSVDFGLCVLEQMLARVEKSGFLQ 788
Query: 174 ---------------GNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMF 218
G +A+ +F+QM GV R ++S N ++ G V + A +F
Sbjct: 789 DLYVGSALVSGFARFGLTDDAKNIFEQM---GV-RNVVSMNGLMVGLVKQKQGEAAAKVF 844
Query: 219 RDLLMRDGIEPTSFTFGSVLIACADMNSL----RKGKEIHALAIALGLQSDTF-VGGALV 273
+ M+D + S ++ +L A ++ + L RKG+E+HA I GL + +G LV
Sbjct: 845 HE--MKDLVGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLV 902
Query: 274 EMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIY 333
MY + + A F+ + +++ G + N + +A + F M P +
Sbjct: 903 NMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFLRMRRTGSMPSNF 962
Query: 334 TVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRI 393
T+ LS+C+SL + G+Q+H ++ G D+DV + AL+ +YA+ G + +
Sbjct: 963 TLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLM 1022
Query: 394 STPDLVSQNAMLTAYA-MHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTG 452
D VS N+++ A + + + +F ++ G+ ++F++ LSA +
Sbjct: 1023 PEYDQVSWNSVIGALSDSEASVSQAVKYFLEMMRGGWGLSRVTFINILSAVSSLSLHEVS 1082
Query: 453 SEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCV 511
+ L+ Y + ++ + GE+ E + ++ D V W +++ G +
Sbjct: 1083 HQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYI 1141
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 133/595 (22%), Positives = 247/595 (41%), Gaps = 115/595 (19%)
Query: 1 MYGKC-GSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNL 59
MYG C S +DA+ VF + R+ +SWNS+++ + G + A + M
Sbjct: 691 MYGSCLDSANDARSVFDRIGIRNSISWNSIISVYSRRGDXVSAYDLFSSM---------- 740
Query: 60 VSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLP-ACARLQ-KLSLGKEFH 117
+E +G F+ PN T S++ AC+ + L + ++
Sbjct: 741 ---------------QKEGLGFSFK-------PNEYTFGSLITAACSSVDFGLCVLEQML 778
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
+ ++GF+ + +V + LV + R G A IF + ++N VS N ++VG +
Sbjct: 779 ARVEKSGFLQDLYVGSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGE 838
Query: 178 EARELFDQMEHL-----------------------GVQRG----------------IISW 198
A ++F +M+ L G ++G +
Sbjct: 839 AAAKVFHEMKDLVGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIG 898
Query: 199 NSMISGYVDNSLYDEAFSMFRDLLMRDGIE------------------------------ 228
N +++ Y + +A S+F ++ +D +
Sbjct: 899 NGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFLRMRRTGSM 958
Query: 229 PTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCR---YQDLVAA 285
P++FT S L +CA + + G++IH + LGL +D V AL+ +Y + + +
Sbjct: 959 PSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKV 1018
Query: 286 QMAFDEIENI--ENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACS 343
E + + +++G + + E +V A++ F EM+ T ILSA S
Sbjct: 1019 FSLMPEYDQVSWNSVIGALSDS--EASVS--QAVKYFLEMMRGGWGLSRVTFINILSAVS 1074
Query: 344 SLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVSQN 402
SL+ E Q+HA ++ D IG AL+ Y KCG + + R+S T D VS N
Sbjct: 1075 SLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWN 1134
Query: 403 AMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYY 462
+M++ Y + + + ++ G R D +F + LSAC +++ G E
Sbjct: 1135 SMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATVLSACASVATLERGMEVHACGIRA 1194
Query: 463 DVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
++ + + +VD+ S+ G + A F + +P+ + W +++ G HG+ E
Sbjct: 1195 CMESDVVVGSALVDMYSKCGRIDYASRFFELMPLR-NVYSWNSMISGYARHGHGE 1248
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 129/485 (26%), Positives = 213/485 (43%), Gaps = 99/485 (20%)
Query: 113 GKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCE 172
+E H + GF+ N F+ N L+++Y R GD+ SA K+F + S +N V+ +I GY +
Sbjct: 563 ARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQ 622
Query: 173 NGNVAEARELFDQMEH--------------------------LGVQ-RGIIS-------- 197
NG EA F M LGVQ G+IS
Sbjct: 623 NGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDV 682
Query: 198 --WNSMISGY---VDNSLYDEAFSMFRDLLMRDGI------------------------- 227
N +IS Y +D++ ++A S+F + +R+ I
Sbjct: 683 VVCNVLISMYGSCLDSA--NDARSVFDRIGIRNSISWNSIISVYSRRGDXVSAYDLFSSM 740
Query: 228 ---------EPTSFTFGSVLI-ACADMN-SLRKGKEIHALAIALGLQSDTFVGGALVEMY 276
+P +TFGS++ AC+ ++ L +++ A G D +VG ALV +
Sbjct: 741 QKEGLGFSFKPNEYTFGSLITAACSSVDFGLCVLEQMLARVEKSGFLQDLYVGSALVSGF 800
Query: 277 CRYQDLVAAQMAFDE--IENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSL-DLTPDIY 333
R+ A+ F++ + N+ ++ G M G A ++F EM L + D Y
Sbjct: 801 ARFGLTDDAKNIFEQMGVRNVVSMNGLMV--GLVKQKQGEAAAKVFHEMKDLVGINSDSY 858
Query: 334 TVGIILSACSSLATME----RGKQVHAYAIRCGY-DSDVHIGTALVDMYAKCGSLKHARL 388
V +LSA S + +E +G++VHA+ IR G D+ V IG LV+MYAK G++ A
Sbjct: 859 VV--LLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACS 916
Query: 389 AYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGS 448
++ + D VS N++++ + ++ F R+ +G P + + +S LS+C G
Sbjct: 917 VFELMVEKDSVSWNSLISGLDQNECSEDAAESFLRMRRTGSMPSNFTLISTLSSCASLGW 976
Query: 449 IKTGSEFF--DLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAP--DSVMWG 504
I G + L D S+ + LL+ E G E +K + P D V W
Sbjct: 977 IMLGEQIHCDGLKLGLDTDVSVSN-----ALLALYAETGCFTECLKVFSLMPEYDQVSWN 1031
Query: 505 ALLGG 509
+++G
Sbjct: 1032 SVIGA 1036
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 138/328 (42%), Gaps = 74/328 (22%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
YGKCG +++ +K+F M +ET + VS
Sbjct: 1108 YGKCGEMNECEKIFARM-----------------------------------SETRDEVS 1132
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W+++I G+ N +A+ +++ M +G ++ T ++VL ACA + L G E H
Sbjct: 1133 WNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATVLSACASVATLERGMEVHACGI 1192
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
R S+ V + LVD+Y +CG + A + F ++N S N++I GY +G+ +A +
Sbjct: 1193 RACMESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALK 1252
Query: 182 LFDQM-------EHLGVQRGIISWNSMISGYVDNSLYD--------------EAFSMFRD 220
LF +M +H+ G++S S + G+V+ E FS D
Sbjct: 1253 LFTRMMLDGQPPDHVAPLLGVLSACSHV-GFVEEGFEHFKSMSEVYRLSPRVEHFSCMVD 1311
Query: 221 LLMRDG-------------IEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTF 267
LL R G ++P + +VL AC N A + L L+
Sbjct: 1312 LLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNA 1371
Query: 268 VGGALV-EMYC---RYQDLVAAQMAFDE 291
V L+ MY +++D+ A+ A E
Sbjct: 1372 VNYVLLANMYASGEKWEDVAKARXAMKE 1399
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 90/201 (44%), Gaps = 7/201 (3%)
Query: 249 KGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFE 308
+ +E+H +I G + F+ L+ +Y R DL +AQ FDE+ N + G+
Sbjct: 562 EARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYT 621
Query: 309 PNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSAC--SSLATMERGKQVHAYAIRCGYDSD 366
N A F +M+ P+ Y G L AC S + + G Q+H + Y SD
Sbjct: 622 QNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSD 681
Query: 367 VHIGTALVDMYAKC-GSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRIL 425
V + L+ MY C S AR + RI + +S N++++ Y+ G F +
Sbjct: 682 VVVCNVLISMYGSCLDSANDARSVFDRIGIRNSISWNSIISVYSRRGDXVSAYDLFSSMQ 741
Query: 426 ASG----FRPDHISFLSALSA 442
G F+P+ +F S ++A
Sbjct: 742 KEGLGFSFKPNEYTFGSLITA 762
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 57/99 (57%)
Query: 349 ERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAY 408
E +++H +I+ G+ ++ + L+++Y + G L A+ + +S +LV+ +++ Y
Sbjct: 561 EEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGY 620
Query: 409 AMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAG 447
+G E A FR ++ +GF P+H +F SAL AC +G
Sbjct: 621 TQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESG 659
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 56/112 (50%), Gaps = 3/112 (2%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG +D A + F++MP R+ SWNS+++ A +G +AL+ RM LD + P+ V
Sbjct: 1209 MYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRM-MLDGQPPDHV 1267
Query: 61 S-WSAVIGGFTQNGYDEEAIGMLFRM-QAEGLEPNARTLSSVLPACARLQKL 110
+ V+ + G+ EE M + L P S ++ R KL
Sbjct: 1268 APLLGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKL 1319
>gi|302797883|ref|XP_002980702.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
gi|300151708|gb|EFJ18353.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
Length = 1108
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 184/602 (30%), Positives = 299/602 (49%), Gaps = 75/602 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKCGS+ +A+ VFK MP + +LV
Sbjct: 482 MYGKCGSIAEAELVFKEMPL----------------------------------PSRSLV 507
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+ ++G + QN +EA G L M G+ P+A + +SVL +C Q+ + I
Sbjct: 508 TWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSCYCSQE---AQVLRMCI 564
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+G+ S + L+ ++ RC ++ +AR
Sbjct: 565 LESGYRS-ACLETALISMHGRCREL-------------------------------EQAR 592
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+FD+M+H ++SW +M+S +N + E +FR + + +G+ P FT + L
Sbjct: 593 SVFDEMDH----GDVVSWTAMVSATAENRDFKEVHHLFRRMQL-EGVIPDKFTLATTLDT 647
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C D +L GK IHA +GL++D V AL+ MY D A F+ ++ + +
Sbjct: 648 CLDSTTLGLGKIIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSW 707
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
+ + A+ LF M + PD T L+ A + GK H A
Sbjct: 708 NIMSAAYAQAGLAKEAVLLFRHMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHGLAAE 767
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
G DSDV + T LV +YAKCG L A ++ +V NA++ A A HG +E +
Sbjct: 768 SGLDSDVSVATGLVKLYAKCGKLDEAISLFRGACQWTVVLLNAIIGALAQHGFSEEAVKM 827
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTG-SEFFDLMAYYDVKPSLKHYTCMVDLLS 479
F ++ G RPD + +S +SAC HAG ++ G S F + Y+ + P+L+HY C VDLL
Sbjct: 828 FWKMQQEGVRPDVATLVSIISACGHAGMVEEGCSSFLTMKEYFGISPTLEHYACFVDLLG 887
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
RAG+L A + I+K+P ++++W +LLG C G+ E G+ A R++EL+P+N+ +V+
Sbjct: 888 RAGQLEHAEQIIRKMPFEDNTLVWTSLLGTCKLQGDAELGERCAQRILELDPHNSAAHVV 947
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTI 599
L+N++ G+W D R+K+ D+ + +PG SW+E ++H+F A DRSH +++EIY +
Sbjct: 948 LSNIYCATGKWKDADVDRKKLLDQNVKNAPGMSWLEIGKQVHEFVAGDRSHPQTDEIYVV 1007
Query: 600 ID 601
+D
Sbjct: 1008 LD 1009
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 152/623 (24%), Positives = 242/623 (38%), Gaps = 151/623 (24%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGS +DA VF +PE+D +V
Sbjct: 175 MYAKCGSPEDAIAVFLTIPEKD------------------------------------VV 198
Query: 61 SWSAVIGGFTQNG-YDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
SW+A+ G + Q + +A+ + M + L PN T + L AC L+ G H
Sbjct: 199 SWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACTSLRD---GTWLHSL 255
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ G +P N L+++Y +CGD A +F + + E+
Sbjct: 256 LHEAGLGFDPLAGNALINMYGKCGDWEGAYGVFKAMASRQELD----------------- 298
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
++SWN+MIS V+ + +A ++FR L + +G+ P S T ++L
Sbjct: 299 ---------------LVSWNAMISASVEAGRHGDAMAIFRRLRL-EGMRPNSVTLITILN 342
Query: 240 ACA----DMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
A A D + RK H G D VG A++ MY + AA F I
Sbjct: 343 ALAASGVDFGAARK---FHGRIWESGYLRDVVVGNAIISMYAKCGFFSAAWTVFRRIR-- 397
Query: 296 ENLLGKMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSA 341
++ +V +WN M F ML + P+ + IL+A
Sbjct: 398 -----------WKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNA 446
Query: 342 CSSLATMERGKQVHAYAIRCGYD-SDVHIGTALVDMYAKCGSLKHARLAYKRISTP--DL 398
CS+ ++ G+++H+ + D + + T LV MY KCGS+ A L +K + P L
Sbjct: 447 CSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSIAEAELVFKEMPLPSRSL 506
Query: 399 VSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSAC-------------VH 445
V+ N ML AYA + KE +L G PD +SF S LS+C +
Sbjct: 507 VTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSCYCSQEAQVLRMCILE 566
Query: 446 AG------------------SIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEA 487
+G ++ FD M + DV +T MV + + E
Sbjct: 567 SGYRSACLETALISMHGRCRELEQARSVFDEMDHGDVVS----WTAMVSATAENRDFKEV 622
Query: 488 YEFIKKIPMA---PDSVMWGALLGGCVSHGNLEFGQI--AADRLIELEPNNTGNYVMLAN 542
+ +++ + PD L C+ L G+I A I LE + +L N
Sbjct: 623 HHLFRRMQLEGVIPDKFTLATTLDTCLDSTTLGLGKIIHACVTEIGLEADIAVENALL-N 681
Query: 543 LFAYAGRWSDLARTRQKMKDRRM 565
+++ G W + + MK R +
Sbjct: 682 MYSNCGDWREALSFFETMKARDL 704
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 134/524 (25%), Positives = 223/524 (42%), Gaps = 92/524 (17%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +CGSL++A +F M ER+ VSW ++++A A +G A M L+
Sbjct: 69 MYVRCGSLEEAHAIFSKMEERNVVSWTALISANAQSGAFARAFALFRTM---------LL 119
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SA PN+ TL ++L ACA + L++G+ H I
Sbjct: 120 ESSAA--------------------------PNSYTLVAMLNACANSRDLAIGRSIHAMI 153
Query: 121 TRNGF----MSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNV 176
G + V N ++++Y +CG A+ +F K+
Sbjct: 154 WELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPEKD----------------- 196
Query: 177 AEARELFDQMEHLGVQRGIISWNSMISGYV-DNSLYDEAFSMFRDLLMRDGIEPTSFTFG 235
++SW +M Y + Y +A +FR++L++ + P TF
Sbjct: 197 ------------------VVSWTAMAGAYAQERRFYPDALRIFREMLLQP-LAPNVITFI 237
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
+ L AC SLR G +H+L GL D G AL+ MY + D A F + +
Sbjct: 238 TALGAC---TSLRDGTWLHSLLHEAGLGFDPLAGNALINMYGKCGDWEGAYGVFKAMASR 294
Query: 296 ENL----LGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSA-CSSLATMER 350
+ L M E + +AM +F + + P+ T+ IL+A +S
Sbjct: 295 QELDLVSWNAMISASVEAGRHG-DAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGA 353
Query: 351 GKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTP-DLVSQNAMLTAYA 409
++ H GY DV +G A++ MYAKCG A ++RI D++S N ML A
Sbjct: 354 ARKFHGRIWESGYLRDVVVGNAIISMYAKCGFFSAAWTVFRRIRWKCDVISWNTMLGASE 413
Query: 410 MHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYD---VKP 466
+ + F +L +G P+ +SF++ L+AC ++ ++ G + L+ V+
Sbjct: 414 DRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVES 473
Query: 467 SLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDS-VMWGALLGG 509
S+ T +V + + G + EA K++P+ S V W +LG
Sbjct: 474 SVA--TMLVSMYGKCGSIAEAELVFKEMPLPSRSLVTWNVMLGA 515
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 119/460 (25%), Positives = 209/460 (45%), Gaps = 69/460 (15%)
Query: 98 SSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSI 157
+++L +C L+ GK H I G + F+ N L+++Y RCG +
Sbjct: 29 TALLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYVRCGSL------------ 76
Query: 158 KNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSM 217
EA +F +ME +R ++SW ++IS + + AF++
Sbjct: 77 -------------------EEAHAIFSKME----ERNVVSWTALISANAQSGAFARAFAL 113
Query: 218 FRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSD----TFVGGALV 273
FR +L+ P S+T ++L ACA+ L G+ IHA+ LGL+ + T VG A++
Sbjct: 114 FRTMLLESSAAPNSYTLVAMLNACANSRDLAIGRSIHAMIWELGLERESTTATLVGNAMI 173
Query: 274 EMYCRY---QDLVAAQMAFDEIENIE--NLLGK-MKEDGFEPNVYTWNAMQLFSEMLSLD 327
MY + +D +A + E + + + G +E F P +A+++F EML
Sbjct: 174 NMYAKCGSPEDAIAVFLTIPEKDVVSWTAMAGAYAQERRFYP-----DALRIFREMLLQP 228
Query: 328 LTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHAR 387
L P++ T L AC+SL G +H+ G D G AL++MY KCG + A
Sbjct: 229 LAPNVITFITALGACTSL---RDGTWLHSLLHEAGLGFDPLAGNALINMYGKCGDWEGAY 285
Query: 388 LAYKRISTP---DLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACV 444
+K +++ DLVS NAM++A G + +A FRR+ G RP+ ++ ++ L+A
Sbjct: 286 GVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALA 345
Query: 445 HAG-SIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMW 503
+G +F + + ++ + ++ G A+ ++I D + W
Sbjct: 346 ASGVDFGAARKFHGRIWESGYLRDVVVGNAIISMYAKCGFFSAAWTVFRRIRWKCDVISW 405
Query: 504 GALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANL 543
+LG S FG++ NT ++++LA +
Sbjct: 406 NTMLGA--SEDRKSFGKVV----------NTFHHMLLAGI 433
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 121/507 (23%), Positives = 215/507 (42%), Gaps = 77/507 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKCG + A VFK M R + +LV
Sbjct: 274 MYGKCGDWEGAYGVFKAMASR---------------------------------QELDLV 300
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPA-CARLQKLSLGKEFHGY 119
SW+A+I + G +A+ + R++ EG+ PN+ TL ++L A A ++FHG
Sbjct: 301 SWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGAARKFHGR 360
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
I +G++ + V N ++ +Y +CG +A +F + K +V
Sbjct: 361 IWESGYLRDVVVGNAIISMYAKCGFFSAAWTVFRRIRWKCDV------------------ 402
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
ISWN+M+ D + + + F +L+ GI+P +F ++L
Sbjct: 403 ----------------ISWNTMLGASEDRKSFGKVVNTFHHMLLA-GIDPNKVSFIAILN 445
Query: 240 ACADMNSLRKGKEIHALAIALGLQ-SDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
AC++ +L G++IH+L + ++ V LV MY + + A++ F E+
Sbjct: 446 ACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSIAEAELVFKEMPLPSRS 505
Query: 299 L--GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHA 356
L + + N + A EML + PD + +LS+C + + +
Sbjct: 506 LVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSCY---CSQEAQVLRM 562
Query: 357 YAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKE 416
+ GY S + TAL+ M+ +C L+ AR + + D+VS AM++A A + KE
Sbjct: 563 CILESGYRSAC-LETALISMHGRCRELEQARSVFDEMDHGDVVSWTAMVSATAENRDFKE 621
Query: 417 GIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVD 476
FRR+ G PD + + L C+ + ++ G + ++ + +++
Sbjct: 622 VHHLFRRMQLEGVIPDKFTLATTLDTCLDSTTLGLGKIIHACVTEIGLEADIAVENALLN 681
Query: 477 LLSRAGELGEAYEFIKKIPMAPDSVMW 503
+ S G+ EA F + + A D V W
Sbjct: 682 MYSNCGDWREALSFFETMK-ARDLVSW 707
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 148/347 (42%), Gaps = 40/347 (11%)
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
+ ++L +C D N L KGK H L GL+ F+G L+ MY R L A F ++E
Sbjct: 28 YTALLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKME 87
Query: 294 NIENLLGKMKEDGFEPNVYTWNAM--------------QLFSEM-LSLDLTPDIYTVGII 338
E NV +W A+ LF M L P+ YT+ +
Sbjct: 88 --------------ERNVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAM 133
Query: 339 LSACSSLATMERGKQVHAYAIRCGYDSD----VHIGTALVDMYAKCGSLKHARLAYKRIS 394
L+AC++ + G+ +HA G + + +G A+++MYAKCGS + A + I
Sbjct: 134 LNACANSRDLAIGRSIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIP 193
Query: 395 TPDLVSQNAMLTAYAMHGHG-KEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGS 453
D+VS AM AYA + + FR +L P+ I+F++AL AC S++ G+
Sbjct: 194 EKDVVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACT---SLRDGT 250
Query: 454 EFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIP--MAPDSVMWGALLGGCV 511
L+ + ++++ + G+ AY K + D V W A++ V
Sbjct: 251 WLHSLLHEAGLGFDPLAGNALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISASV 310
Query: 512 SHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQ 558
G +A R + LE + ++ L A A D R+
Sbjct: 311 EAGR-HGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGAARK 356
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 88/195 (45%), Gaps = 6/195 (3%)
Query: 320 FSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAK 379
S + +D D+ +L +C + +GK+ H G + + +G L++MY +
Sbjct: 13 LSGAVRVDRAADLQEYTALLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYVR 72
Query: 380 CGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRR-ILASGFRPDHISFLS 438
CGSL+ A + ++ ++VS A+++A A G A FR +L S P+ + ++
Sbjct: 73 CGSLEEAHAIFSKMEERNVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVA 132
Query: 439 ALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYT----CMVDLLSRAGELGEAYEFIKKI 494
L+AC ++ + G ++ ++ T M+++ ++ G +A I
Sbjct: 133 MLNACANSRDLAIGRSIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTI 192
Query: 495 PMAPDSVMWGALLGG 509
P D V W A+ G
Sbjct: 193 P-EKDVVSWTAMAGA 206
>gi|225465296|ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Vitis vinifera]
Length = 729
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 179/584 (30%), Positives = 316/584 (54%), Gaps = 58/584 (9%)
Query: 56 TPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKE 115
PN+ +++++ ++ + + M +MQ G+ P+A ++ + + G
Sbjct: 62 NPNVFVFTSMLRFYSHLQDHAKVVLMYEQMQGCGVRPDAFVYPILIKSAG-----TGGIG 116
Query: 116 FHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSK--------------------- 154
FH ++ + G S+ FV N ++D+Y R G + A K+F +
Sbjct: 117 FHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKW 176
Query: 155 ---------FSI---KNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMI 202
F + +N ++ ++ GY + ++ AR FD M +R ++SWN+M+
Sbjct: 177 ESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMP----ERSVVSWNAML 232
Query: 203 SGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGL 262
SGY N L +EA +F D ++ GIEP T+ +V+ AC+ +G A ++ L
Sbjct: 233 SGYAQNGLAEEALRLF-DEMVNAGIEPDETTWVTVISACSS-----RGDPCLAASLVRTL 286
Query: 263 -----QSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAM 317
Q + FV AL++MY ++ DL +A+ F+ + + G+ N + A+
Sbjct: 287 HQKRIQLNCFVRTALLDMYAKFGDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAI 346
Query: 318 QLFSEMLSL-DLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDM 376
+LF EM++ LTPD T+ ++SAC L +E G V + + A++ M
Sbjct: 347 ELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFM 406
Query: 377 YAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISF 436
Y++CGS++ A+ ++ ++T D+VS N +++ +A HGHG E I + G PD ++F
Sbjct: 407 YSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTF 466
Query: 437 LSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPM 496
+ L+AC HAG ++ G + F+ + P++ HY CMVDLL R GEL +A ++++PM
Sbjct: 467 IGVLTACSHAGLLEEGRKVFESIK----DPAIDHYACMVDLLGRVGELEDAKRTMERMPM 522
Query: 497 APDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLART 556
P + ++G+LL H +E G++AA++L ELEP+N+GN+++L+N++A AGRW D+ R
Sbjct: 523 EPHAGVYGSLLNASRIHKQVELGELAANKLFELEPDNSGNFILLSNIYASAGRWKDVERI 582
Query: 557 RQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTII 600
R+ MK + K+ G SW+E ++HKF +DRSH+RS++IY ++
Sbjct: 583 REAMKKGGVKKTTGWSWVEYGGKLHKFIVADRSHERSDDIYQLL 626
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 106/411 (25%), Positives = 180/411 (43%), Gaps = 45/411 (10%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y K S A+ +F +MPER+ ++W ++VT A ++ LE R E ++VS
Sbjct: 173 YWKWESEGQAQWLFDVMPERNVITWTAMVTGYAK----VKDLEAARRYFDCMPER-SVVS 227
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W+A++ G+ QNG EEA+ + M G+EP+ T +V+ AC+ L +
Sbjct: 228 WNAMLSGYAQNGLAEEALRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLH 287
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
+ N FV L+D+Y + GD+ SA K+F+ +N V+ N++I GY +NG A A E
Sbjct: 288 QKRIQLNCFVRTALLDMYAKFGDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIE 347
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
LF +M + + P T SV+ AC
Sbjct: 348 LFKEM-----------------------------------ITAKKLTPDEVTMVSVISAC 372
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK 301
+ +L G + ++ A++ MY R + A+ F E+ + +
Sbjct: 373 GHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYN 432
Query: 302 MKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRC 361
GF + + A+ L S M + PD T +L+ACS +E G++V +I+
Sbjct: 433 TLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFE-SIK- 490
Query: 362 GYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST-PDLVSQNAMLTAYAMH 411
D + +VD+ + G L+ A+ +R+ P ++L A +H
Sbjct: 491 --DPAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLLNASRIH 539
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 102/253 (40%), Gaps = 71/253 (28%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G LD A+K+F MP R+ V+WNS++ A NG A+E + M
Sbjct: 304 MYAKFGDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEM----------- 352
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+ A+ L P+ T+ SV+ AC L L LG ++
Sbjct: 353 ------------------------ITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFL 388
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
T N + N ++ +Y RCG M A ++F + + ++ VS NT+I G+ +G+ EA
Sbjct: 389 TENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAI 448
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
L M+ GIEP TF VL A
Sbjct: 449 NLMSTMK------------------------------------EGGIEPDRVTFIGVLTA 472
Query: 241 CADMNSLRKGKEI 253
C+ L +G+++
Sbjct: 473 CSHAGLLEEGRKV 485
>gi|224126745|ref|XP_002319916.1| predicted protein [Populus trichocarpa]
gi|222858292|gb|EEE95839.1| predicted protein [Populus trichocarpa]
Length = 606
Score = 314 bits (805), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 181/526 (34%), Positives = 283/526 (53%), Gaps = 54/526 (10%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
+L+SW+++I G+ + ++++ + M G+EPN TLS+V+ AC+ L L LGK FH
Sbjct: 126 DLISWTSMITGYVKVEKPKKSLELFLEMLGLGIEPNGFTLSAVIKACSGLGDLRLGKCFH 185
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
G + GF N + L+D+Y R N V
Sbjct: 186 GVVMVRGFDLNDVISTALIDMYGR-------------------------------NSAVD 214
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
+A +F ++ Q I W S+IS + N +YD+A F + + G+ P FTFG+V
Sbjct: 215 DAILVFVELP----QPDAICWTSIISAFTRNDVYDKALGFFYSMCRKHGLSPDGFTFGTV 270
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDE--IENI 295
L AC ++ L++GKE+HA I GL + FV +LV+MY + + + +Q FD ++N+
Sbjct: 271 LTACGNLGRLKQGKEVHAKVITSGLSGNVFVESSLVDMYGKCRLVNQSQCVFDRMSVKNL 330
Query: 296 EN---LLGKMKEDG-FEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG 351
+ LLG ++G FE + +++F E +D Y+ G +L AC+ LA + +G
Sbjct: 331 VSWTALLGGYCQNGDFE------SVIRIFREGKKVD----TYSFGTVLRACAGLAAVRQG 380
Query: 352 KQVHA-YAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAM 410
K+VH Y RC + DV +ALVD+YAKCG + A + R+S +L++ N+M+ +A
Sbjct: 381 KEVHCQYVKRCCW-RDVVTESALVDLYAKCGCIDFAYRIFVRMSVRNLITWNSMIYGFAQ 439
Query: 411 HGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLK 469
+G G E F ++ G RPD+ISF+ L AC HAG + G ++F M Y++KP ++
Sbjct: 440 NGRGGEVFQLFDEMIEEGIRPDYISFVGVLFACSHAGLVDQGKKYFAAMTEVYEIKPGIE 499
Query: 470 HYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIEL 529
HY CM+DLL RAG L EA I+ + +W LLG C + + + A + +EL
Sbjct: 500 HYNCMIDLLGRAGLLEEAENLIENANCRDEPSLWTVLLGACAASPHSATAERIAKKAVEL 559
Query: 530 EPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIE 575
+P++ +YV LAN++ GRW D + R M R + K PG SWIE
Sbjct: 560 KPDHHLSYVYLANVYRAVGRWDDAVKIRNLMTKRGVGKMPGTSWIE 605
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 128/483 (26%), Positives = 224/483 (46%), Gaps = 50/483 (10%)
Query: 38 LVLEALECLERMSSLDNET-PNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNART 96
L+L + ++SL+ +T N S + I + ++G EAI +L + L
Sbjct: 3 LLLSSQRHYSTLASLNLKTLENPQSKAYKIIQYCKSGSLFEAIHVLNSIDWTRLSNKPFF 62
Query: 97 LSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFS 156
+S+L C + + G +FH + ++G ++ FV N L+ +Y + G
Sbjct: 63 YASLLQTCTKAVSFTHGIQFHSHAIKSGLDTDRFVGNSLLALYFKLGP------------ 110
Query: 157 IKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFS 216
N+ EAR +FD + + + +ISW SMI+GYV ++
Sbjct: 111 ------------------NLFEARRVFDGLFY----KDLISWTSMITGYVKVEKPKKSLE 148
Query: 217 MFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMY 276
+F ++L GIEP FT +V+ AC+ + LR GK H + + G + + AL++MY
Sbjct: 149 LFLEMLGL-GIEPNGFTLSAVIKACSGLGDLRLGKCFHGVVMVRGFDLNDVISTALIDMY 207
Query: 277 CRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLD-LTPDIYTV 335
R + A + F E+ + + F N A+ F M L+PD +T
Sbjct: 208 GRNSAVDDAILVFVELPQPDAICWTSIISAFTRNDVYDKALGFFYSMCRKHGLSPDGFTF 267
Query: 336 GIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST 395
G +L+AC +L +++GK+VHA I G +V + ++LVDMY KC + ++ + R+S
Sbjct: 268 GTVLTACGNLGRLKQGKEVHAKVITSGLSGNVFVESSLVDMYGKCRLVNQSQCVFDRMSV 327
Query: 396 PDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSE- 454
+LVS A+L Y +G + I RI G + D SF + L AC +++ G E
Sbjct: 328 KNLVSWTALLGGYCQNGDFESVI----RIFREGKKVDTYSFGTVLRACAGLAAVRQGKEV 383
Query: 455 ---FFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCV 511
+ + DV + +VDL ++ G + AY ++ + + + W +++ G
Sbjct: 384 HCQYVKRCCWRDVVTE----SALVDLYAKCGCIDFAYRIFVRMSVR-NLITWNSMIYGFA 438
Query: 512 SHG 514
+G
Sbjct: 439 QNG 441
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 152/314 (48%), Gaps = 8/314 (2%)
Query: 211 YDEAFSMFRDLLMRDGIEPT-----SFTFGSVLIACADMNSLRKGKEIHALAIALGLQSD 265
Y ++ S+F + + + I+ T F + S+L C S G + H+ AI GL +D
Sbjct: 35 YCKSGSLFEAIHVLNSIDWTRLSNKPFFYASLLQTCTKAVSFTHGIQFHSHAIKSGLDTD 94
Query: 266 TFVGGALVEMYCRY-QDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEML 324
FVG +L+ +Y + +L A+ FD + + + G+ +++LF EML
Sbjct: 95 RFVGNSLLALYFKLGPNLFEARRVFDGLFYKDLISWTSMITGYVKVEKPKKSLELFLEML 154
Query: 325 SLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLK 384
L + P+ +T+ ++ ACS L + GK H + G+D + I TAL+DMY + ++
Sbjct: 155 GLGIEPNGFTLSAVIKACSGLGDLRLGKCFHGVVMVRGFDLNDVISTALIDMYGRNSAVD 214
Query: 385 HARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILAS-GFRPDHISFLSALSAC 443
A L + + PD + ++++A+ + + + F + G PD +F + L+AC
Sbjct: 215 DAILVFVELPQPDAICWTSIISAFTRNDVYDKALGFFYSMCRKHGLSPDGFTFGTVLTAC 274
Query: 444 VHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMW 503
+ G +K G E + + ++ + +VD+ + + ++ ++ + + V W
Sbjct: 275 GNLGRLKQGKEVHAKVITSGLSGNVFVESSLVDMYGKCRLVNQSQCVFDRMSV-KNLVSW 333
Query: 504 GALLGGCVSHGNLE 517
ALLGG +G+ E
Sbjct: 334 TALLGGYCQNGDFE 347
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 74/153 (48%), Gaps = 8/153 (5%)
Query: 21 RDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIG 80
RD V+ +++V A G + A RMS NL++W+++I GF QNG E
Sbjct: 394 RDVVTESALVDLYAKCGCIDFAYRIFVRMS-----VRNLITWNSMIYGFAQNGRGGEVFQ 448
Query: 81 MLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFV--VNGLVDV 138
+ M EG+ P+ + VL AC+ + GK++ +T + P + N ++D+
Sbjct: 449 LFDEMIEEGIRPDYISFVGVLFACSHAGLVDQGKKYFAAMTEV-YEIKPGIEHYNCMIDL 507
Query: 139 YRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYC 171
R G + A + + ++E S T+++G C
Sbjct: 508 LGRAGLLEEAENLIENANCRDEPSLWTVLLGAC 540
>gi|449441542|ref|XP_004138541.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Cucumis sativus]
Length = 652
Score = 314 bits (805), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 177/560 (31%), Positives = 284/560 (50%), Gaps = 74/560 (13%)
Query: 57 PNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEF 116
P + W+A+ G+ N + E + + +M++ + PN T VL +CA++ G+E
Sbjct: 128 PKVELWNAISRGYFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLKSCAKIGAFVEGEEI 187
Query: 117 HGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNV 176
H + + G N FV L+DVY + SA K+F +N V+ ++I GY V
Sbjct: 188 HCEVIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTSMISGYILCNRV 247
Query: 177 AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGS 236
A AR LFD L +R ++ WN M+SGY++ A +F + RD +
Sbjct: 248 ALARRLFD----LAPERDVVLWNIMVSGYIEIGDMKAARKLFDTMPYRDTMS-------- 295
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
N++ G Y D+ A + F+E+
Sbjct: 296 -------WNTMLNG-------------------------YANNGDVEACEQLFEEMP--- 320
Query: 297 NLLGKMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLT-PDIYTVGIILSA 341
E NV++WN + + F ML L P+ T+ +LSA
Sbjct: 321 -----------ERNVFSWNGLIGGYAHNGCFFEVLRCFKRMLIDGLVVPNDATLVTVLSA 369
Query: 342 CSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQ 401
C+ L ++ GK VH YA G+ +++G AL+DMY+KCG +++A ++ + DL++
Sbjct: 370 CARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGLIENAMEVFESMDLKDLITW 429
Query: 402 NAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY 461
N+M+ A HG G + + F ++ +G +PD I+F+ L +C H G ++ G+ +F+ M
Sbjct: 430 NSMICGLATHGCGADALTLFHQMKINGEKPDGITFIGVLCSCTHLGLVEEGTSYFNSMVN 489
Query: 462 -YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQ 520
Y + P ++HY CMVDL RAG L A EF+K++PM D+V+W ALLG C + N++ +
Sbjct: 490 EYSIAPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAALLGACRIYKNIDLAE 549
Query: 521 IAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEI 580
+A +LI LEP N NYV+L+N++ GRW D+AR + M+D K PGCS IE D +
Sbjct: 550 LALQKLIVLEPKNPANYVLLSNIYGDLGRWKDVARLKILMRDTGSKKLPGCSLIEVNDSV 609
Query: 581 HKFRASDRSHDRSEEIYTII 600
+F + D H +S+EIY ++
Sbjct: 610 VEFYSLDERHSQSKEIYGVL 629
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 149/296 (50%), Gaps = 9/296 (3%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y + G + A+K+F MP RD +SWN+++ A NG V + E M N+ S
Sbjct: 272 YIEIGDMKAARKLFDTMPYRDTMSWNTMLNGYANNGDVEACEQLFEEMPE-----RNVFS 326
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLE-PNARTLSSVLPACARLQKLSLGKEFHGYI 120
W+ +IGG+ NG E + RM +GL PN TL +VL ACARL L LGK H Y
Sbjct: 327 WNGLIGGYAHNGCFFEVLRCFKRMLIDGLVVPNDATLVTVLSACARLGALDLGKWVHVYA 386
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
GF + +V N L+D+Y +CG + +A+++F +K+ ++ N++I G +G A+A
Sbjct: 387 ATIGFKGSIYVGNALIDMYSKCGLIENAMEVFESMDLKDLITWNSMICGLATHGCGADAL 446
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LF QM+ G + I++ ++ L +E S F ++ I P +G ++
Sbjct: 447 TLFHQMKINGEKPDGITFIGVLCSCTHLGLVEEGTSYFNSMVNEYSIAPQIEHYGCMVDL 506
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
L + E + +++D + AL+ Y+++ A++A ++ +E
Sbjct: 507 FGRAGLLDRAIE---FVKRMPMEADAVIWAALLGACRIYKNIDLAELALQKLIVLE 559
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 105/434 (24%), Positives = 185/434 (42%), Gaps = 50/434 (11%)
Query: 11 AKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVI---- 66
A+ +F P+ WN++ N E + +M S+D PN ++ V+
Sbjct: 118 ARHLFDHFPDPKVELWNAISRGYFHNAFYREVVFLFGKMKSMDVR-PNCFTFPLVLKSCA 176
Query: 67 -----------------GGFTQNGY----------DEEAIGMLFRMQAEGLEPNARTLSS 99
GG N + AIG +++ LE N +S
Sbjct: 177 KIGAFVEGEEIHCEVIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTS 236
Query: 100 VLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKN 159
++ +++L + + +V+G +++ GDM +A K+F ++
Sbjct: 237 MISGYILCNRVALARRLFDLAPERDVVLWNIMVSGYIEI----GDMKAARKLFDTMPYRD 292
Query: 160 EVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFR 219
+S NT++ GY NG+V +LF++M +R + SWN +I GY N + E F+
Sbjct: 293 TMSWNTMLNGYANNGDVEACEQLFEEMP----ERNVFSWNGLIGGYAHNGCFFEVLRCFK 348
Query: 220 DLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRY 279
+L+ + P T +VL ACA + +L GK +H A +G + +VG AL++MY +
Sbjct: 349 RMLIDGLVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKC 408
Query: 280 QDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIIL 339
+ A F+ ++ + + G + +A+ LF +M PD T +L
Sbjct: 409 GLIENAMEVFESMDLKDLITWNSMICGLATHGCGADALTLFHQMKINGEKPDGITFIGVL 468
Query: 340 SACSSLATMERGKQ-----VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS 394
+C+ L +E G V+ Y+I + H G +VD++ + G L A KR+
Sbjct: 469 CSCTHLGLVEEGTSYFNSMVNEYSIAPQIE---HYG-CMVDLFGRAGLLDRAIEFVKRMP 524
Query: 395 T-PDLVSQNAMLTA 407
D V A+L A
Sbjct: 525 MEADAVIWAALLGA 538
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/281 (20%), Positives = 128/281 (45%), Gaps = 12/281 (4%)
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
F S+L +C + L+K + A I G Q + +V +V + + + A+ FD
Sbjct: 70 FISLLRSCKTVALLQK---VQAQIITHGFQYNGYVAPNVVTSWVGLKQMAHARHLFDHFP 126
Query: 294 NIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ 353
+ + L G+ N + + LF +M S+D+ P+ +T ++L +C+ + G++
Sbjct: 127 DPKVELWNAISRGYFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLKSCAKIGAFVEGEE 186
Query: 354 VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGH 413
+H I+ G + + + T L+D+Y+ ++ A + + ++V+ +M++ Y +
Sbjct: 187 IHCEVIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTSMISGYILCNR 246
Query: 414 GKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTC 473
+A RR+ D + + +S + G +K + FD M Y D +
Sbjct: 247 ----VALARRLFDLAPERDVVLWNIMVSGYIEIGDMKAARKLFDTMPYRDTMS----WNT 298
Query: 474 MVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
M++ + G++ + +++P + W L+GG +G
Sbjct: 299 MLNGYANNGDVEACEQLFEEMP-ERNVFSWNGLIGGYAHNG 338
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG +++A +VF+ M +D ++WNS++ A +G +AL +M ++ E P+ +
Sbjct: 404 MYSKCGLIENAMEVFESMDLKDLITWNSMICGLATHGCGADALTLFHQM-KINGEKPDGI 462
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE 88
++ V+ T G EE M E
Sbjct: 463 TFIGVLCSCTHLGLVEEGTSYFNSMVNE 490
>gi|255561624|ref|XP_002521822.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539035|gb|EEF40632.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 793
Score = 314 bits (805), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 192/605 (31%), Positives = 297/605 (49%), Gaps = 80/605 (13%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC +D A+ +F+ E D VSWNS++T
Sbjct: 154 MYCKCERIDHARLLFESSDELDNVSWNSLIT----------------------------- 184
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPAC-ARLQKL-SLGKEFHG 118
G+ + G EE + +L +M GL NA TL S L +C L + S GK HG
Sbjct: 185 -------GYARVGAYEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNMVSYGKTLHG 237
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNV-- 176
Y + G + V L+D+Y + G + A+++F +N V N +I G+ + ++
Sbjct: 238 YTVKQGLDLDIVVGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQTEDIDK 297
Query: 177 ---AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFT 233
EA +LF QM+ R GI+P+ FT
Sbjct: 298 ECAYEALKLFSQMQ------------------------------------RQGIKPSDFT 321
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
F S++ C + + GK+IHA +QSD F+G L+E+Y F+
Sbjct: 322 FSSIIKICNHIEAFEYGKQIHAHICKHNIQSDEFIGSTLIELYSLLGSTEDQLKCFNSTP 381
Query: 294 NIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ 353
++ + G+ N +A+ LF E+L+ PD + + +LSAC+ +A G+Q
Sbjct: 382 KLDIVSWTTMIAGYAQNGQFESALALFYELLASGKKPDEFIITTMLSACADVAAERSGEQ 441
Query: 354 VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGH 413
VH YA++ G + + + + MYAK G+L A++ ++ I PD+VS + M+ + A HGH
Sbjct: 442 VHGYAVKTGIGTLAIVQNSQISMYAKSGNLDSAKITFEEIKNPDVVSWSVMICSNAQHGH 501
Query: 414 GKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYT 472
K+ I F + + G P+ I+FL L+AC H G ++ G +++ M YD+K ++KH T
Sbjct: 502 AKDAINLFELMKSYGIHPNQITFLGVLTACSHGGLVEEGLRYYESMKKDYDMKINVKHCT 561
Query: 473 CMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPN 532
C+VDLLSRAG L +A FI VMW LL GC + ++ G+ A++LIEL+P
Sbjct: 562 CIVDLLSRAGRLLDAKNFILNSGFGDHPVMWRTLLSGCRIYKDIVTGKHVAEKLIELDPQ 621
Query: 533 NTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDR 592
+ +YV+L N++ AG + R+ MKDR + K PG SWIE +E+H F D SH
Sbjct: 622 ESSSYVLLYNIYTDAGIDLPATKIRELMKDRGIRKEPGQSWIEVGNEVHSFVVGDISHPM 681
Query: 593 SEEIY 597
S+ IY
Sbjct: 682 SQIIY 686
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 167/355 (47%), Gaps = 13/355 (3%)
Query: 170 YCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEP 229
Y + G + A++LFD+M +R +IS+N +ISGY Y +A +F + M ++
Sbjct: 54 YSKWGEMGNAQKLFDRMS----ERSVISYNILISGYGGMGFYHKAIGLFSEARMA-CLKL 108
Query: 230 TSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAF 289
F++ VL AC + GK IH LAI GL F+ L++MYC+ + + A++ F
Sbjct: 109 DKFSYAGVLSACGQIKDFALGKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLF 168
Query: 290 DEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACS-SLATM 348
+ + ++N+ G+ ++L +M L + +T+G L +C +L M
Sbjct: 169 ESSDELDNVSWNSLITGYARVGAYEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNM 228
Query: 349 -ERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTA 407
GK +H Y ++ G D D+ +GTAL+DMYAK G L A ++ ++V NAM+
Sbjct: 229 VSYGKTLHGYTVKQGLDLDIVVGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAG 288
Query: 408 YAMHGH-----GKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYY 462
+ E + F ++ G +P +F S + C H + + G + + +
Sbjct: 289 FIQTEDIDKECAYEALKLFSQMQRQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHICKH 348
Query: 463 DVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
+++ + +++L S G + + P D V W ++ G +G E
Sbjct: 349 NIQSDEFIGSTLIELYSLLGSTEDQLKCFNSTPKL-DIVSWTTMIAGYAQNGQFE 402
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 122/266 (45%), Gaps = 7/266 (2%)
Query: 250 GKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEP 309
GK HA I F+ + +Y ++ ++ AQ FD + + + G+
Sbjct: 28 GKLAHAHMIKTAFNPCLFLLNNFLNLYSKWGEMGNAQKLFDRMSERSVISYNILISGYGG 87
Query: 310 NVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHI 369
+ A+ LFSE L D ++ +LSAC + GK +H AI CG V +
Sbjct: 88 MGFYHKAIGLFSEARMACLKLDKFSYAGVLSACGQIKDFALGKVIHGLAIVCGLGQQVFL 147
Query: 370 GTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGF 429
L+DMY KC + HARL ++ D VS N+++T YA G +E + ++ +G
Sbjct: 148 TNLLIDMYCKCERIDHARLLFESSDELDNVSWNSLITGYARVGAYEEMLKLLVKMHHTGL 207
Query: 430 RPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKH----YTCMVDLLSRAGELG 485
R + + SAL +C ++ + + Y VK L T ++D+ ++ G LG
Sbjct: 208 RLNAFTLGSALKSCYL--NLNNMVSYGKTLHGYTVKQGLDLDIVVGTALLDMYAKTGYLG 265
Query: 486 EAYEFIKKIPMAPDSVMWGALLGGCV 511
+A + + P + VM+ A++ G +
Sbjct: 266 DAIQLFRTSP-NQNVVMYNAMIAGFI 290
>gi|115468242|ref|NP_001057720.1| Os06g0506100 [Oryza sativa Japonica Group]
gi|52075894|dbj|BAD45840.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113595760|dbj|BAF19634.1| Os06g0506100 [Oryza sativa Japonica Group]
Length = 766
Score = 314 bits (805), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 191/598 (31%), Positives = 303/598 (50%), Gaps = 74/598 (12%)
Query: 22 DCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGM 81
D + N++VT + NGLV + ER+ D L+SW ++I GF Q G++ EA+ +
Sbjct: 186 DLIVQNALVTMYSKNGLVDDGFMLFERIKDKD-----LISWGSIIAGFAQQGFEMEALQV 240
Query: 82 LFRMQAEGLE-PNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYR 140
M EG PN S AC + G++ HG + + +V L D+Y
Sbjct: 241 FREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMYA 300
Query: 141 RCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNS 200
RC ++ SA F + EA +L +SWNS
Sbjct: 301 RCKNLDSARVAFYRI----------------------EAPDL-------------VSWNS 325
Query: 201 MISGYVDNSLYDEAFSMFRDLLMRD-GIEPTSFTFGSVLIACADMNSLRKGKEIHALAIA 259
+++ Y L EA +F + MRD G+ P T +L AC ++L G+ IH+ +
Sbjct: 326 IVNAYSVEGLLSEALVLFSE--MRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVK 383
Query: 260 LGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNA--- 316
LGL D V +L+ MY R DL +A F EI+ + +V TWN+
Sbjct: 384 LGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIK--------------DQDVVTWNSILT 429
Query: 317 -----------MQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDS 365
++LFS + + + D ++ +LSA + L E KQVHAYA + G
Sbjct: 430 ACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVD 489
Query: 366 DVHIGTALVDMYAKCGSLKHA-RLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRI 424
D + L+D YAKCGSL A RL + D+ S ++++ YA G+ KE F R+
Sbjct: 490 DRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEAFDLFSRM 549
Query: 425 LASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMVDLLSRAGE 483
+ G RP+H++F+ L+AC G + G ++ +M Y + P+ +H +C+VDLL+RAG+
Sbjct: 550 RSLGIRPNHVTFIGVLTACSRVGFVNEGCYYYSIMEPEYGIVPTREHCSCIVDLLARAGK 609
Query: 484 LGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANL 543
L EA FI ++P PD +MW LL H ++E G+ AA+ ++ ++P+++ YV+L N+
Sbjct: 610 LTEAANFIDQMPFEPDIIMWKTLLAASKMHNDMEMGKRAAEGILNIDPSHSAAYVLLCNI 669
Query: 544 FAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
+A +G W++ AR ++ M+ + KSPG SW++ + E+ F DRSH SEEIY +++
Sbjct: 670 YAASGNWNEFARLKKAMRTSGVKKSPGKSWVKLKGELKVFIVEDRSHPESEEIYAMLE 727
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 145/554 (26%), Positives = 230/554 (41%), Gaps = 109/554 (19%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYG+C + D A++VF MP R N V
Sbjct: 95 MYGRCAAPDSARQVFDEMPAR------------------------------------NPV 118
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW++VI QNG +A+G+ M G + L S + AC L + G++ H +
Sbjct: 119 SWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELGDVGTGRQVHAHA 178
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
++ S+ V N LV +Y + G + +F + K+ +S +II G+ + G
Sbjct: 179 LKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAGFAQQG------ 232
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
F+ EA +FR++++ P F FGS A
Sbjct: 233 --FEM---------------------------EALQVFREMIVEGSHHPNEFHFGSAFRA 263
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C + S G++IH L+I L D +VG +L +MY R ++L +A++AF IE
Sbjct: 264 CGAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMYARCKNLDSARVAFYRIE------- 316
Query: 301 KMKEDGFEPNVYTWN--------------AMQLFSEMLSLDLTPDIYTVGIILSACSSLA 346
P++ +WN A+ LFSEM L PD TV +L AC
Sbjct: 317 -------APDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRD 369
Query: 347 TMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLT 406
+ G+ +H+Y ++ G D DV + +L+ MYA+C L A + I D+V+ N++LT
Sbjct: 370 ALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILT 429
Query: 407 AYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKP 466
A A H H +E + F + S D IS + LSA G E + Y K
Sbjct: 430 ACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSASAELGYF----EMVKQVHAYAFKA 485
Query: 467 SLKH----YTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE--FGQ 520
L ++D ++ G L +A + + D W +L+ G G + F
Sbjct: 486 GLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEAFDL 545
Query: 521 IAADRLIELEPNNT 534
+ R + + PN+
Sbjct: 546 FSRMRSLGIRPNHV 559
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 115/421 (27%), Positives = 196/421 (46%), Gaps = 31/421 (7%)
Query: 98 SSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSI 157
++++ AC+RL+ L G+ H ++ + S + G
Sbjct: 48 AALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAG----------------------- 84
Query: 158 KNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSM 217
N V N +I Y AR++FD+M R +SW S+I+ +V N +A +
Sbjct: 85 -NTVLGNHLITMYGRCAAPDSARQVFDEMP----ARNPVSWASVIAAHVQNGRAGDALGL 139
Query: 218 FRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYC 277
F +L R G F GS + AC ++ + G+++HA A+ SD V ALV MY
Sbjct: 140 FSSML-RSGTAADQFALGSAVRACTELGDVGTGRQVHAHALKSERGSDLIVQNALVTMYS 198
Query: 278 RYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEML-SLDLTPDIYTVG 336
+ + M F+ I++ + + GF + A+Q+F EM+ P+ + G
Sbjct: 199 KNGLVDDGFMLFERIKDKDLISWGSIIAGFAQQGFEMEALQVFREMIVEGSHHPNEFHFG 258
Query: 337 IILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTP 396
AC ++ + E G+Q+H +I+ D D+++G +L DMYA+C +L AR+A+ RI P
Sbjct: 259 SAFRACGAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMYARCKNLDSARVAFYRIEAP 318
Query: 397 DLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFF 456
DLVS N+++ AY++ G E + F + SG RPD I+ L ACV ++ G
Sbjct: 319 DLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGRLIH 378
Query: 457 DLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNL 516
+ + + ++ + +R +L A + +I D V W ++L C H +
Sbjct: 379 SYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIK-DQDVVTWNSILTACAQHNHP 437
Query: 517 E 517
E
Sbjct: 438 E 438
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 132/282 (46%), Gaps = 9/282 (3%)
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALG-------LQSDTFVGGALVEMYCRYQDLVAAQ 286
+ +++ AC+ + SL +G+ +H +A L +T +G L+ MY R +A+
Sbjct: 47 YAALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRCAAPDSAR 106
Query: 287 MAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLA 346
FDE+ + N +A+ LFS ML D + +G + AC+ L
Sbjct: 107 QVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELG 166
Query: 347 TMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLT 406
+ G+QVHA+A++ SD+ + ALV MY+K G + + ++RI DL+S +++
Sbjct: 167 DVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIA 226
Query: 407 AYAMHGHGKEGIAHFRRILASG-FRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVK 465
+A G E + FR ++ G P+ F SA AC GS + G + L Y +
Sbjct: 227 GFAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLD 286
Query: 466 PSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALL 507
L + D+ +R L A +I APD V W +++
Sbjct: 287 RDLYVGCSLSDMYARCKNLDSARVAFYRIE-APDLVSWNSIV 327
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 103/419 (24%), Positives = 170/419 (40%), Gaps = 85/419 (20%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +C +LD A+ F + D VSWNS+V A + GL+ EAL
Sbjct: 298 MYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEAL----------------- 340
Query: 61 SWSAVIGGFTQNGYDEEAIGMLF-RMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
+LF M+ GL P+ T+ +L AC L G+ H Y
Sbjct: 341 --------------------VLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSY 380
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ + G + V N L+ +Y RC D+ SA+ +F + ++ V+ N+I+ ++ + E
Sbjct: 381 LVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEV 440
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPT--SFTFGSV 237
+LF SL +++ EP+ + +V
Sbjct: 441 LKLF-------------------------SLLNKS-------------EPSLDRISLNNV 462
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
L A A++ K++HA A GL D + L++ Y + L A F+ + N +
Sbjct: 463 LSASAELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRD 522
Query: 298 LLG-KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHA 356
+ G+ Y A LFS M SL + P+ T +L+ACS + + G +
Sbjct: 523 VFSWSSLIVGYAQFGYAKEAFDLFSRMRSLGIRPNHVTFIGVLTACSRVGFVNEG--CYY 580
Query: 357 YAI---RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNAMLTAYAMH 411
Y+I G + +VD+ A+ G L A ++ PD++ +L A MH
Sbjct: 581 YSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLLAASKMH 639
>gi|147863814|emb|CAN79347.1| hypothetical protein VITISV_019894 [Vitis vinifera]
Length = 667
Score = 314 bits (805), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 184/593 (31%), Positives = 306/593 (51%), Gaps = 50/593 (8%)
Query: 7 SLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVI 66
+L DA K+ MP+ VS+N++++ GLV EA++ + S D SW+ V+
Sbjct: 65 ALSDAHKLLHFMPQPSVVSYNTILSGYFKFGLVSEAIKLFDGTSKRDCH-----SWNIVL 119
Query: 67 GGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFM 126
G +N E + +M+ + P+ T + ++P C L G++ H
Sbjct: 120 SGCVKNHKLGEGLTHFMKMRCSSVRPDNFTYAIIIPCC----DLGFGQQVHA-------- 167
Query: 127 SNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQM 186
D+ + C D+ + + ++ Y E G + +AR++FD M
Sbjct: 168 ----------DIVKVCSDLDAFIG-------------TNLLRMYAEVGEIGDARKVFDGM 204
Query: 187 EHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNS 246
RG+++WN+MIS Y D++ +FR L R+GI +T+ VL A
Sbjct: 205 P----SRGLVTWNAMISCYSKYGRGDKSIGLFRQL-XREGISADEYTYAIVLNEFAARWQ 259
Query: 247 LRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDG 306
+ + ++H+L I G SD F ALV +Y + + +A F+EI + + + + G
Sbjct: 260 VFEAMQVHSLIIERGFCSDRFTNNALVNLYSKCGYVASASRLFEEIPDQDVVSWTVIIVG 319
Query: 307 FEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGY-DS 365
F + + AM LF +M D+ P+ +T G +L AC+ ++G+ H ++ G +
Sbjct: 320 FLQSGHMEEAMWLFYQMQLGDIEPNSFTFGGLLGACADANAFQKGRHFHGLVLKFGLLGA 379
Query: 366 DVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRIL 425
DV +G+A+VDMY+KCG + A A++ + D+ S N ++ YA +G G + + + ++
Sbjct: 380 DVVVGSAVVDMYSKCGEMGDALRAFQEMPERDIASWNGIICGYAQNGAGMKALKLYNEMV 439
Query: 426 ---ASGFRPDHISFLSALSACVHAGSIKTGSEFF-DLMAYYDVKPSLKHYTCMVDLLSRA 481
SG P+ ++F+ L AC H G +K G +F +++ + +KP+ +HYTCMVDLL RA
Sbjct: 440 LLGPSGIAPNEVTFVGVLCACSHNGLLKEGYSYFKEMVDKHLIKPTAEHYTCMVDLLGRA 499
Query: 482 GELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLA 541
G L EA I +P+ PD+VMWGALLG C HG+++ + A+ L EP N+ NYV+LA
Sbjct: 500 GLLQEAEALILALPIKPDNVMWGALLGACKLHGDVQMTRRTAEHLYTNEPRNSSNYVLLA 559
Query: 542 NLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSE 594
N + G W + R+ M+ R + K+ GCSW+E +H F A D H + E
Sbjct: 560 NSYTDIGEWGEAVEIREVMEARGVEKTAGCSWVEIGTCMHSFLAGDXLHPQIE 612
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 108/415 (26%), Positives = 192/415 (46%), Gaps = 41/415 (9%)
Query: 116 FHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGN 175
H + +NG +++ + N L+ Y + A K+ + VS NTI+ GY + G
Sbjct: 37 LHASLVKNGLIAHVYQCNILLQAYINSQALSDAHKLLHFMPQPSVVSYNTILSGYFKFGL 96
Query: 176 VAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMR-DGIEPTSFTF 234
V+EA +LFD +R SWN ++SG V N E + F + MR + P +FT+
Sbjct: 97 VSEAIKLFDGTS----KRDCHSWNIVLSGCVKNHKLGEGLTHF--MKMRCSSVRPDNFTY 150
Query: 235 GSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIEN 294
+++I C D+ G+++HA + + D F+G L+ MY ++ A+ FD + +
Sbjct: 151 -AIIIPCCDLGF---GQQVHADIVKVCSDLDAFIGTNLLRMYAEVGEIGDARKVFDGMPS 206
Query: 295 IENLLGKMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILS 340
+ TWNAM LF ++ ++ D YT I+L+
Sbjct: 207 --------------RGLVTWNAMISCYSKYGRGDKSIGLFRQLXREGISADEYTYAIVLN 252
Query: 341 ACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVS 400
++ + QVH+ I G+ SD ALV++Y+KCG + A ++ I D+VS
Sbjct: 253 EFAARWQVFEAMQVHSLIIERGFCSDRFTNNALVNLYSKCGYVASASRLFEEIPDQDVVS 312
Query: 401 QNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA 460
++ + GH +E + F ++ P+ +F L AC A + + G F L+
Sbjct: 313 WTVIIVGFLQSGHMEEAMWLFYQMQLGDIEPNSFTFGGLLGACADANAFQKGRHFHGLVL 372
Query: 461 YYD-VKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
+ + + + +VD+ S+ GE+G+A +++P D W ++ G +G
Sbjct: 373 KFGLLGADVVVGSAVVDMYSKCGEMGDALRAFQEMP-ERDIASWNGIICGYAQNG 426
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 137/277 (49%), Gaps = 43/277 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KCG + A ++F+ +P++D VSW
Sbjct: 288 LYSKCGYVASASRLFEEIPDQDVVSW---------------------------------- 313
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+ +I GF Q+G+ EEA+ + ++MQ +EPN+ T +L ACA G+ FHG +
Sbjct: 314 --TVIIVGFLQSGHMEEAMWLFYQMQLGDIEPNSFTFGGLLGACADANAFQKGRHFHGLV 371
Query: 121 TRNGFMSNPFVV-NGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ G + VV + +VD+Y +CG+M AL+ F + ++ S N II GY +NG +A
Sbjct: 372 LKFGLLGADVVVGSAVVDMYSKCGEMGDALRAFQEMPERDIASWNGIICGYAQNGAGMKA 431
Query: 180 RELFDQMEHL---GVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGS 236
+L+++M L G+ +++ ++ N L E +S F++++ + I+PT+ +
Sbjct: 432 LKLYNEMVLLGPSGIAPNEVTFVGVLCACSHNGLLKEGYSYFKEMVDKHLIKPTAEHYTC 491
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALV 273
++ L +E AL +AL ++ D + GAL+
Sbjct: 492 MVDLLGRAGLL---QEAEALILALPIKPDNVMWGALL 525
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 91/204 (44%), Gaps = 19/204 (9%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNE--TPN 58
MY KCG + DA + F+ MPERD SWN ++ A NG ++AL+ M L PN
Sbjct: 390 MYSKCGEMGDALRAFQEMPERDIASWNGIICGYAQNGAGMKALKLYNEMVLLGPSGIAPN 449
Query: 59 LVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGL-EPNARTLSSVLPACAR---LQK---LS 111
V++ V+ + NG +E M + L +P A + ++ R LQ+ L
Sbjct: 450 EVTFVGVLCACSHNGLLKEGYSYFKEMVDKHLIKPTAEHYTCMVDLLGRAGLLQEAEALI 509
Query: 112 LGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVG-- 169
L G + ++G V + RR + L ++ + S N +++
Sbjct: 510 LALPIKPDNVMWGALLGACKLHGDVQMTRRTAEHL--------YTNEPRNSSNYVLLANS 561
Query: 170 YCENGNVAEARELFDQMEHLGVQR 193
Y + G EA E+ + ME GV++
Sbjct: 562 YTDIGEWGEAVEIREVMEARGVEK 585
>gi|225432742|ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
[Vitis vinifera]
Length = 836
Score = 314 bits (805), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 189/597 (31%), Positives = 304/597 (50%), Gaps = 45/597 (7%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y +CG +D KVF+ M ER N+VS
Sbjct: 176 YAECGHMDHGHKVFEGMSER------------------------------------NVVS 199
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W+++I G+ + +EA+ + F M G+ P++ T+ V+ ACA+L+ L +G+ YI
Sbjct: 200 WTSLICGYARGDRPKEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIG 259
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
G N +VN LVD+Y +CG + +A ++F + +N V NTI+ Y G EA
Sbjct: 260 ELGLKLNKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALA 319
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAF-SMFRDLLMRDGIEPTSFTFGSVLIA 240
+ D+M G + ++ S IS L D + + ++R+G+E + G+V+I
Sbjct: 320 ILDEMLQQGPRPDRVTMLSAISA--SAQLVDLFYGKVCHGYVIRNGLEGWD-SIGNVII- 375
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVG-GALVEMYCRYQDLVAAQMAFDEIENIENLL 299
DM ++ GK A + + + T V +L + R D+ +A F++I +
Sbjct: 376 --DM-YMKCGKPEMACRVFDLMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVF 432
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
G +A++LF EM + D T+ I SAC L E K VH Y
Sbjct: 433 WNTMISGLVQKSLFEDAIELFREMQGEGIKADRVTMMGIASACGYLGAPELAKWVHTYIE 492
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
+ G D+ + TALVDM+A+CG + A + +++ D+ + A + AM G+G+
Sbjct: 493 KNGIPCDMRLNTALVDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATG 552
Query: 420 HFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLS 479
F ++L G +PD + F+ L+AC H G ++ G F LM + + P ++HY CMVDLL
Sbjct: 553 LFNQMLIQGVKPDVVLFVQVLTACSHGGQVEQGLHIFSLMEDHGISPQIEHYGCMVDLLG 612
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
RAG L EA++ IK +PM P+ V+WG+LL C H N+E AA+R+ EL P G +V+
Sbjct: 613 RAGLLREAFDLIKSMPMEPNDVVWGSLLAACRVHKNVEMATYAAERINELAPQRAGVHVL 672
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEI 596
L+N++A AG+W+D+AR R ++++ + K PG S ++ IH+F + D SH I
Sbjct: 673 LSNIYASAGKWTDVARVRLNLREKGVRKVPGSSSVQVNGVIHEFTSGDESHPEMTHI 729
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 113/414 (27%), Positives = 191/414 (46%), Gaps = 46/414 (11%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG++D AK++F +R+ V +N++++ A GL EAL L+ M
Sbjct: 276 MYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQ--------- 326
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+G P+ T+ S + A A+L L GK HGY+
Sbjct: 327 ---------------------------QGPRPDRVTMLSAISASAQLVDLFYGKVCHGYV 359
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
RNG + N ++D+Y +CG A ++F S K VS N++ G+ NG+V A
Sbjct: 360 IRNGLEGWDSIGNVIIDMYMKCGKPEMACRVFDLMSNKTVVSWNSLTAGFIRNGDVESAW 419
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
E+F+Q+ +R + WN+MISG V SL+++A +FR+ + +GI+ T + A
Sbjct: 420 EVFNQIP----ERNAVFWNTMISGLVQKSLFEDAIELFRE-MQGEGIKADRVTMMGIASA 474
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI--ENIENL 298
C + + K +H G+ D + ALV+M+ R D +A F+++ ++
Sbjct: 475 CGYLGAPELAKWVHTYIEKNGIPCDMRLNTALVDMFARCGDPQSAMQVFNKMTERDVSAW 534
Query: 299 LGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYA 358
+ E N A LF++ML + PD+ +L+ACS +E+G + +
Sbjct: 535 TAAIGTMAMEGN--GEGATGLFNQMLIQGVKPDVVLFVQVLTACSHGGQVEQGLHIFSLM 592
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST-PDLVSQNAMLTAYAMH 411
G + +VD+ + G L+ A K + P+ V ++L A +H
Sbjct: 593 EDHGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPMEPNDVVWGSLLAACRVH 646
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 120/486 (24%), Positives = 194/486 (39%), Gaps = 68/486 (13%)
Query: 63 SAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITR 122
+++I G++ G EAI + RM G+ PN T VL C ++ G + HG + +
Sbjct: 100 NSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFCEGIQVHGSVVK 159
Query: 123 NGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAREL 182
G + F+ N L+ Y CG M K+F S +N VS ++I GY EA L
Sbjct: 160 MGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGDRPKEAVSL 219
Query: 183 FDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACA 242
F +M + GI P+S T V+ ACA
Sbjct: 220 FFEM------------------------------------VEAGIRPSSVTMVCVISACA 243
Query: 243 DMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKM 302
+ L G+ + A LGL+ + + ALV+MY + + AA+ FDE + +L
Sbjct: 244 KLRDLDMGERVCAYIGELGLKLNKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNT 303
Query: 303 KEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCG 362
+ A+ + EML PD T+ +SA + L + GK H Y IR G
Sbjct: 304 ILSNYARQGLAREALAILDEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYVIRNG 363
Query: 363 YDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHG-------- 414
+ IG ++DMY KCG + A + +S +VS N++ + +G
Sbjct: 364 LEGWDSIGNVIIDMYMKCGKPEMACRVFDLMSNKTVVSWNSLTAGFIRNGDVESAWEVFN 423
Query: 415 -----------------------KEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKT 451
++ I FR + G + D ++ + SAC + G+ +
Sbjct: 424 QIPERNAVFWNTMISGLVQKSLFEDAIELFREMQGEGIKADRVTMMGIASACGYLGAPEL 483
Query: 452 GSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCV 511
+ + ++ T +VD+ +R G+ A + K+ D W A +G
Sbjct: 484 AKWVHTYIEKNGIPCDMRLNTALVDMFARCGDPQSAMQVFNKMT-ERDVSAWTAAIGTMA 542
Query: 512 SHGNLE 517
GN E
Sbjct: 543 MEGNGE 548
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 118/466 (25%), Positives = 191/466 (40%), Gaps = 91/466 (19%)
Query: 97 LSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFS 156
L+ L C L +L K+ H IT+NG P + LV+ + +I S S
Sbjct: 28 LNESLRCCKTLNQL---KQLHCQITKNGLDQIPSTLTKLVN---------AGAEIASPES 75
Query: 157 IKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFS 216
+ +A ELF E + + NS+I GY L EA
Sbjct: 76 LD----------------YARKAFELFK--EDVRSDDALFMLNSLIRGYSSAGLGREAIL 117
Query: 217 MFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMY 276
++ +L+ G+ P +TF VL C + + +G ++H + +GL+ D F+ L+ Y
Sbjct: 118 LYVRMLVL-GVTPNHYTFPFVLSGCTKIAAFCEGIQVHGSVVKMGLEEDVFIQNCLIHFY 176
Query: 277 CRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWN--------------AMQLFSE 322
+ F+ + E NV +W A+ LF E
Sbjct: 177 AECGHMDHGHKVFEGMS--------------ERNVVSWTSLICGYARGDRPKEAVSLFFE 222
Query: 323 MLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGS 382
M+ + P T+ ++SAC+ L ++ G++V AY G + + ALVDMY KCG+
Sbjct: 223 MVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGELGLKLNKVMVNALVDMYMKCGA 282
Query: 383 LKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSA 442
+ A+ + +LV N +L+ YA G +E +A +L G RPD ++ LSA+SA
Sbjct: 283 IDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPRPDRVTMLSAISA 342
Query: 443 -----------CVHAGSIKTGSEFFDLMAYYDVKPSLK----HYTCMV-DLLS------- 479
H I+ G E +D + + +K C V DL+S
Sbjct: 343 SAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMACRVFDLMSNKTVVSW 402
Query: 480 --------RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
R G++ A+E +IP ++V W ++ G V E
Sbjct: 403 NSLTAGFIRNGDVESAWEVFNQIP-ERNAVFWNTMISGLVQKSLFE 447
>gi|147818972|emb|CAN67116.1| hypothetical protein VITISV_026465 [Vitis vinifera]
Length = 1817
Score = 314 bits (805), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 176/523 (33%), Positives = 276/523 (52%), Gaps = 39/523 (7%)
Query: 77 EAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLV 136
EA+ RM G +P L + L +CA+L LG + H I + GF N F+ + LV
Sbjct: 1299 EALESFXRMNTSGTKPTKFILCTALNSCAKLLNWGLGVQIHARIIQTGFEDNLFLNSALV 1358
Query: 137 DVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGII 196
D+Y +C + +A+ +FD ME + +
Sbjct: 1359 DLYAKCD-------------------------------AIVDAKRVFDGME----KHDQV 1383
Query: 197 SWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSL-RKGKEIHA 255
SW S+ISG+ N EA F+++L I+P T+ S + AC + ++ + +HA
Sbjct: 1384 SWTSIISGFSKNGRGKEAILFFKEMLGSQ-IKPNCVTYVSXISACTGLETIFDQCALLHA 1442
Query: 256 LAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWN 315
+ LG TFV L++ Y + + A + F +N+L G+ N+
Sbjct: 1443 HVVKLGFGVKTFVVSCLIDCYSKCGRIDQAVLLFGTTIERDNILFNSMISGYSQNLXGEE 1502
Query: 316 AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVD 375
A++LF ZM + L P +T+ IL+AC SL +++G+QVH+ + G +S+V + +AL+D
Sbjct: 1503 ALKLFVZMRNNGLXPTDHTLTSILNACGSLTILQQGRQVHSLVAKMGSESNVFVVSALLD 1562
Query: 376 MYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILAS-GFRPDHI 434
MY+KCGS+ AR + + + V +M+T YA G G EG+ F R++ GF PDHI
Sbjct: 1563 MYSKCGSIDEARCVFXQAVEKNTVLWTSMITGYAQSGRGPEGLGLFERLVXEEGFTPDHI 1622
Query: 435 SFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKK 493
F + L+AC HAG + G ++F+ M Y + P L Y C+VDL R G L +A E ++
Sbjct: 1623 CFTAVLTACNHAGFLDKGIDYFNQMRRDYGLVPDLDQYACLVDLYVRNGHLRKAKELMEA 1682
Query: 494 IPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDL 553
P P+SVMWG+ L C +G E G+ AAD+L ++EP +T YV +A+++A AG WS++
Sbjct: 1683 XPXEPNSVMWGSFLSSCKLYGEAELGREAADKLFKMEPCSTAPYVAMASIYAQAGLWSEV 1742
Query: 554 ARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEI 596
R+ MK + + KS G SW+E +H F +D SH RS +I
Sbjct: 1743 VEIRKLMKQKGLRKSAGWSWVEVDKRVHVFXVADASHPRSRDI 1785
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 101/421 (23%), Positives = 179/421 (42%), Gaps = 76/421 (18%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KC ++ DAK+VF M + D VSW S+++
Sbjct: 1360 LYAKCDAIVDAKRVFDGMEKHDQVSWTSIIS----------------------------- 1390
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKL-SLGKEFHGY 119
GF++NG +EAI M ++PN T S + AC L+ + H +
Sbjct: 1391 -------GFSKNGRGKEAILFFKEMLGSQIKPNCVTYVSXISACTGLETIFDQCALLHAH 1443
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ + GF FVV+ L+D Y +CG + A+ +F ++ + N++I GY +N EA
Sbjct: 1444 VVKLGFGVKTFVVSCLIDCYSKCGRIDQAVLLFGTTIERDNILFNSMISGYSQNLXGEEA 1503
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
+LF ZM + +G+ PT T S+L
Sbjct: 1504 LKLFVZMRN------------------------------------NGLXPTDHTLTSILN 1527
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
AC + L++G+++H+L +G +S+ FV AL++MY + + A+ F + +L
Sbjct: 1528 ACGSLTILQQGRQVHSLVAKMGSESNVFVVSALLDMYSKCGSIDEARCVFXQAVEKNTVL 1587
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLD-LTPDIYTVGIILSACSSLATMERGKQVHAYA 358
G+ + + LF ++ + TPD +L+AC+ +++G
Sbjct: 1588 WTSMITGYAQSGRGPEGLGLFERLVXEEGFTPDHICFTAVLTACNHAGFLDKGIDYFNQM 1647
Query: 359 IR-CGYDSDVHIGTALVDMYAKCGSLKHAR-LAYKRISTPDLVSQNAMLTAYAMHGHGKE 416
R G D+ LVD+Y + G L+ A+ L P+ V + L++ ++G +
Sbjct: 1648 RRDYGLVPDLDQYACLVDLYVRNGHLRKAKELMEAXPXEPNSVMWGSFLSSCKLYGEAEL 1707
Query: 417 G 417
G
Sbjct: 1708 G 1708
>gi|296089801|emb|CBI39620.3| unnamed protein product [Vitis vinifera]
Length = 591
Score = 314 bits (804), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 178/545 (32%), Positives = 285/545 (52%), Gaps = 39/545 (7%)
Query: 59 LVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHG 118
L+ + +I G+T A + M E L+PNA T+SSVL AC ++ LS G+ HG
Sbjct: 58 LIGEALMIAGYTSCNNHTHAWMVFCEMMNEELDPNAFTISSVLKACKGMKCLSYGRLVHG 117
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCG-DMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
++G +V N L+D+Y C M A +F +KNEVS
Sbjct: 118 LAIKHGLDGFIYVDNALMDMYATCCVSMDDACMVFRGIHLKNEVS--------------- 162
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
W ++I+GY +FR +L+ + +E F+F
Sbjct: 163 --------------------WTTLIAGYTHRDDGYGGLRVFRQMLLEE-VELNPFSFSIA 201
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
+ AC + S G+++HA G +S+ V ++++MYCR A F E+ +
Sbjct: 202 VRACTSIGSHTFGEQLHAAVTKHGFESNLPVMNSILDMYCRCSCFSEANRYFYEMNQRDL 261
Query: 298 LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAY 357
+ G+E + T ++ +FS M S +P+ +T I++AC++LA + G+Q+H
Sbjct: 262 ITWNTLIAGYERSNPT-ESLYVFSMMESEGFSPNCFTFTSIMAACATLAFLNCGQQIHGR 320
Query: 358 AIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEG 417
IR G D ++ + AL+DMY+KCG++ + + +S DLVS AM+ Y HG+G+E
Sbjct: 321 IIRRGLDGNLALSNALIDMYSKCGNIADSHQVFGGMSRRDLVSWTAMMIGYGTHGYGEEA 380
Query: 418 IAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVD 476
+ F +++ SG RPD + F++ LSAC HAG + G +F LM Y++ P + Y C+VD
Sbjct: 381 VELFDKMVRSGIRPDRVVFMAILSACSHAGLVDEGLRYFKLMVGDYNISPDQEIYGCVVD 440
Query: 477 LLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGN 536
LL RAG++ EAYE I+ +P PD +WG LG C +H G++AA R+++L P+ G
Sbjct: 441 LLGRAGKVEEAYELIESMPFKPDECVWGPFLGACKAHTFPNLGKLAAHRILDLRPHMAGT 500
Query: 537 YVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEI 596
YVML+N++A G+W + AR R+ MK K G SW+E + ++ F D + E I
Sbjct: 501 YVMLSNIYAADGKWGEFARLRKLMKRMGNKKETGRSWVEVGNHVYSFVVGDEVGSKIEGI 560
Query: 597 YTIID 601
Y +++
Sbjct: 561 YQVLE 565
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 165/338 (48%), Gaps = 8/338 (2%)
Query: 193 RGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKE 252
+G+I MI+GY + + A+ +F ++ M + ++P +FT SVL AC M L G+
Sbjct: 56 KGLIGEALMIAGYTSCNNHTHAWMVFCEM-MNEELDPNAFTISSVLKACKGMKCLSYGRL 114
Query: 253 IHALAIALGLQSDTFVGGALVEMY---CRYQDLVAAQMAFDEIENIENLLGKMKEDGFEP 309
+H LAI GL +V AL++MY C D A M F I + G+
Sbjct: 115 VHGLAIKHGLDGFIYVDNALMDMYATCCVSMD--DACMVFRGIHLKNEVSWTTLIAGYTH 172
Query: 310 NVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHI 369
+ +++F +ML ++ + ++ I + AC+S+ + G+Q+HA + G++S++ +
Sbjct: 173 RDDGYGGLRVFRQMLLEEVELNPFSFSIAVRACTSIGSHTFGEQLHAAVTKHGFESNLPV 232
Query: 370 GTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGF 429
+++DMY +C A + ++ DL++ N ++ Y + E + F + + GF
Sbjct: 233 MNSILDMYCRCSCFSEANRYFYEMNQRDLITWNTLIAGYE-RSNPTESLYVFSMMESEGF 291
Query: 430 RPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYE 489
P+ +F S ++AC + G + + + +L ++D+ S+ G + ++++
Sbjct: 292 SPNCFTFTSIMAACATLAFLNCGQQIHGRIIRRGLDGNLALSNALIDMYSKCGNIADSHQ 351
Query: 490 FIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLI 527
+ D V W A++ G +HG E D+++
Sbjct: 352 VFGGMSRR-DLVSWTAMMIGYGTHGYGEEAVELFDKMV 388
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 99/400 (24%), Positives = 170/400 (42%), Gaps = 48/400 (12%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
N VSW+ +I G+T + + +M E +E N + S + AC + + G++ H
Sbjct: 159 NEVSWTTLIAGYTHRDDGYGGLRVFRQMLLEEVELNPFSFSIAVRACTSIGSHTFGEQLH 218
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
+T++GF SN V+N ++D+Y RC A + F + + ++ ++ NT+I GY E N
Sbjct: 219 AAVTKHGFESNLPVMNSILDMYCRCSCFSEANRYFYEMNQRDLITWNTLIAGY-ERSNPT 277
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
E+ +F ME +G P FTF S+
Sbjct: 278 ESLYVFSMME------------------------------------SEGFSPNCFTFTSI 301
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
+ ACA + L G++IH I GL + + AL++MY + ++ + F + +
Sbjct: 302 MAACATLAFLNCGQQIHGRIIRRGLDGNLALSNALIDMYSKCGNIADSHQVFGGMSRRDL 361
Query: 298 LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAY 357
+ G+ + Y A++LF +M+ + PD ILSACS ++ G +
Sbjct: 362 VSWTAMMIGYGTHGYGEEAVELFDKMVRSGIRPDRVVFMAILSACSHAGLVDEGLRYFKL 421
Query: 358 AI-RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST----PDLVSQNAMLTAYAMHG 412
+ D I +VD+ + G ++ AY+ I + PD L A H
Sbjct: 422 MVGDYNISPDQEIYGCVVDLLGRAGKVEE---AYELIESMPFKPDECVWGPFLGACKAHT 478
Query: 413 HGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTG 452
G RIL RP H++ + + ++A K G
Sbjct: 479 FPNLGKLAAHRIL--DLRP-HMAGTYVMLSNIYAADGKWG 515
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 112/238 (47%), Gaps = 37/238 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +C +A + F M +RD ++WN+++ ER N T +L
Sbjct: 239 MYCRCSCFSEANRYFYEMNQRDLITWNTLIAG-------------YER----SNPTESLY 281
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+S M++EG PN T +S++ ACA L L+ G++ HG I
Sbjct: 282 VFSM--------------------MESEGFSPNCFTFTSIMAACATLAFLNCGQQIHGRI 321
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R G N + N L+D+Y +CG++ + ++F S ++ VS +++GY +G EA
Sbjct: 322 IRRGLDGNLALSNALIDMYSKCGNIADSHQVFGGMSRRDLVSWTAMMIGYGTHGYGEEAV 381
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
ELFD+M G++ + + +++S L DE F+ ++ I P +G V+
Sbjct: 382 ELFDKMVRSGIRPDRVVFMAILSACSHAGLVDEGLRYFKLMVGDYNISPDQEIYGCVV 439
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 66/316 (20%), Positives = 114/316 (36%), Gaps = 79/316 (25%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG++ D+ +VF M RD VSW +++ +G
Sbjct: 339 MYSKCGNIADSHQVFGGMSRRDLVSWTAMMIGYGTHG----------------------- 375
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
Y EEA+ + +M G+ P+ ++L AC+ + G + +
Sbjct: 376 -------------YGEEAVELFDKMVRSGIRPDRVVFMAILSACSHAGLVDEGLRYFKLM 422
Query: 121 TRNGFMSNPFVVNG-LVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ +S + G +VD+ R G + A ++ K + +G C+
Sbjct: 423 VGDYNISPDQEIYGCVVDLLGRAGKVEEAYELIESMPFKPDECVWGPFLGACK------- 475
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
F + L R I+ ++G + M ++ DG
Sbjct: 476 AHTFPNLGKLAAHR-ILDLRPHMAG---------TYVMLSNIYAADG------------- 512
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI---- 295
+ LRK L +G + +T G + VE+ V +IE I
Sbjct: 513 KWGEFARLRK------LMKRMGNKKET--GRSWVEVGNHVYSFVVGDEVGSKIEGIYQVL 564
Query: 296 ENLLGKMKEDGFEPNV 311
ENL+G MKE G+ P++
Sbjct: 565 ENLIGHMKESGYVPDL 580
>gi|15229194|ref|NP_190540.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183401|sp|Q9M2Y7.1|PP274_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49710
gi|6723416|emb|CAB66909.1| putative protein [Arabidopsis thaliana]
gi|332645058|gb|AEE78579.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 721
Score = 314 bits (804), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 188/602 (31%), Positives = 307/602 (50%), Gaps = 48/602 (7%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KCG L A+ F E + S+N +V A A + + A + + + P+ V
Sbjct: 52 LYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQ-----PDTV 106
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
S++ +I G+ A+ + RM+ G E + TLS ++ AC ++ L K+ H +
Sbjct: 107 SYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACC--DRVDLIKQLHCFS 164
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
GF S V N V Y + G + EA
Sbjct: 165 VSGGFDSYSSVNNAFVTYYSK-------------------------------GGLLREAV 193
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+F M+ L R +SWNSMI Y + +A +++++++ + G + FT SVL A
Sbjct: 194 SVFYGMDEL---RDEVSWNSMIVAYGQHKEGAKALALYKEMIFK-GFKIDMFTLASVLNA 249
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRY---QDLVAAQMAFDEIENIEN 297
++ L G++ H I G ++ VG L++ Y + + ++ F EI + +
Sbjct: 250 LTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDL 309
Query: 298 LLGKMKEDGFEPNV-YTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHA 356
++ G+ N + A++ F +M + PD + + SACS+L++ + KQ+H
Sbjct: 310 VVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHG 369
Query: 357 YAIRCGYDSD-VHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGK 415
AI+ S+ + + AL+ +Y K G+L+ AR + R+ + VS N M+ YA HGHG
Sbjct: 370 LAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGT 429
Query: 416 EGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCM 474
E + ++R+L SG P+ I+F++ LSAC H G + G E+F+ M + ++P +HY+CM
Sbjct: 430 EALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCM 489
Query: 475 VDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNT 534
+DLL RAG+L EA FI +P P SV W ALLG C H N+ + AA+ L+ ++P
Sbjct: 490 IDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAA 549
Query: 535 GNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSE 594
YVMLAN++A A +W ++A R+ M+ +R+ K PGCSWIE + + H F A D SH
Sbjct: 550 TPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIR 609
Query: 595 EI 596
E+
Sbjct: 610 EV 611
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 129/512 (25%), Positives = 229/512 (44%), Gaps = 67/512 (13%)
Query: 95 RTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSK 154
+T +L + L GK H ++ S+ ++ N V++Y +CG + A F
Sbjct: 9 KTFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYS 68
Query: 155 FSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEA 214
N S N I+ Y ++ + AR+LFD++ Q +S+N++ISGY D A
Sbjct: 69 TEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIP----QPDTVSYNTLISGYADARETFAA 124
Query: 215 FSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVE 274
+F+ + + G E FT ++ AC D L K++H +++ G S + V A V
Sbjct: 125 MVLFKR-MRKLGFEVDGFTLSGLIAACCDRVDLI--KQLHCFSVSGGFDSYSSVNNAFVT 181
Query: 275 MYCR---YQDLVAAQMAFDEIENIENL------LGKMKEDGFEPNVYTWNAMQLFSEMLS 325
Y + ++ V+ DE+ + + G+ KE A+ L+ EM+
Sbjct: 182 YYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGA--------KALALYKEMIF 233
Query: 326 LDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCG---S 382
D++T+ +L+A +SL + G+Q H I+ G+ + H+G+ L+D Y+KCG
Sbjct: 234 KGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDG 293
Query: 383 LKHARLAYKRISTPDLVSQNAMLTAYAMHGH-GKEGIAHFRRILASGFRPDHISFLSALS 441
+ + ++ I +PDLV N M++ Y+M+ +E + FR++ G RPD SF+ S
Sbjct: 294 MYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTS 353
Query: 442 AC-----------VHAGSIKT-------------------GSEFFDLMAYYDVKPSLK-- 469
AC +H +IK+ D +D P L
Sbjct: 354 ACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAV 413
Query: 470 HYTCMVDLLSRAGELGEA---YEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRL 526
+ CM+ ++ G EA Y+ + +AP+ + + A+L C G ++ GQ + +
Sbjct: 414 SFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTM 473
Query: 527 IE---LEPNNTGNYVMLANLFAYAGRWSDLAR 555
E +EP +Y + +L AG+ + R
Sbjct: 474 KETFKIEP-EAEHYSCMIDLLGRAGKLEEAER 504
>gi|302793246|ref|XP_002978388.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
gi|300153737|gb|EFJ20374.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
Length = 687
Score = 314 bits (804), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 189/604 (31%), Positives = 305/604 (50%), Gaps = 77/604 (12%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y KCGSL DA+KVF MP R +WNS+
Sbjct: 55 YTKCGSLTDARKVFDGMPCRSVGTWNSM-------------------------------- 82
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
I ++ + EA + RMQ EG + T S+L AC + L GK I+
Sbjct: 83 ----ISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDACVNPENLQHGKHVRESIS 138
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
F + FV L+ +Y RC +A ++F + KN
Sbjct: 139 ETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQKN---------------------- 176
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
+I+W+++I+ + D+ EA FR ++ ++GI P TF S+L
Sbjct: 177 -------------LITWSAIITAFADHGHCGEALRYFR-MMQQEGILPNRVTFISLLNGF 222
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMY--CRYQDLVAAQMAFDEIENIENLL 299
+ L + IH L GL T + ALV +Y C +L A++ E++ +
Sbjct: 223 TTPSGLEELSRIHLLITEHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITA 282
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTP-DIYTVGIILSACSSLATMERGKQVHAYA 358
+ +G+ + + A++ + + L L+ P D T +L+AC+S ++ GK +H+ A
Sbjct: 283 WNVLINGYTLHGRSREALETY-QRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNA 341
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGI 418
+ CG DSDV + AL +MY+KCGS+++AR + + VS N ML AYA HG +E +
Sbjct: 342 VECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVL 401
Query: 419 AHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDL 477
R++ G + + I+F+S LS+C HAG I G ++F + + ++ +HY C+VDL
Sbjct: 402 KLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDL 461
Query: 478 LSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNY 537
L RAG+L EA ++I K+P P+ V W +LLG C H +L+ G++AA +L+EL+P N+
Sbjct: 462 LGRAGKLQEAEKYISKMPSEPEIVTWASLLGACRVHKDLDRGKLAARKLLELDPGNSSAS 521
Query: 538 VMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
V+L+N+++ G W + A+ R+ M RR+ K PG S I+ ++++H+FR D SH R+ EIY
Sbjct: 522 VVLSNIYSERGDWKNAAKLRRAMASRRVKKVPGISSIQVKNKVHEFRVRDTSHPRAAEIY 581
Query: 598 TIID 601
++
Sbjct: 582 DKVE 585
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/449 (21%), Positives = 178/449 (39%), Gaps = 67/449 (14%)
Query: 85 MQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGD 144
M EG++ N T +VL + L GK H + + + FV LV+ Y +CG
Sbjct: 1 MLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGS 60
Query: 145 MLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISG 204
+ A K+F ++ + N++I Y + EA +F +M+H
Sbjct: 61 LTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQH---------------- 104
Query: 205 YVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQS 264
+G TF S+L AC + +L+ GK + +
Sbjct: 105 --------------------EGERCDRVTFLSILDACVNPENLQHGKHVRESISETSFEL 144
Query: 265 DTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWN--------- 315
D FVG AL+ MY R + EN + G+MK + N+ TW+
Sbjct: 145 DLFVGTALITMYARCRS----------PENAAQVFGRMK----QKNLITWSAIITAFADH 190
Query: 316 -----AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIG 370
A++ F M + P+ T +L+ ++ + +E ++H G D +
Sbjct: 191 GHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMS 250
Query: 371 TALVDMYAKC--GSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASG 428
ALV++Y +C G L A + + + + + N ++ Y +HG +E + ++R+
Sbjct: 251 NALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLINGYTLHGRSREALETYQRLQLEA 310
Query: 429 FRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAY 488
D ++F+S L+AC + S+ G + + + ++ S+ G + A
Sbjct: 311 IPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENAR 370
Query: 489 EFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
+P+ +V W +L HG E
Sbjct: 371 RIFDSMPIR-SAVSWNGMLQAYAQHGESE 398
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 108/430 (25%), Positives = 180/430 (41%), Gaps = 78/430 (18%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +C S ++A +VF M +++ ++W++++TA A +G EAL RM + PN V
Sbjct: 155 MYARCRSPENAAQVFGRMKQKNLITWSAIITAFADHGHCGEALRYF-RMMQQEGILPNRV 213
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
++ +++ GFT GLE +R H I
Sbjct: 214 TFISLLNGFT---------------TPSGLEELSR--------------------IHLLI 238
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
T +G + N LV+VY G CE G + A
Sbjct: 239 TEHGLDDTTTMSNALVNVY-----------------------------GRCETGELDVAE 269
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+ +M+ ++ I +WN +I+GY + EA ++ L + + I TF SVL A
Sbjct: 270 VILQEMD----EQQITAWNVLINGYTLHGRSREALETYQRLQL-EAIPVDKVTFISVLNA 324
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C SL +GK IH+ A+ GL SD V AL MY + + A+ FD + +
Sbjct: 325 CTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSW 384
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
+ + + ++L +M + + T +LS+CS + G Q Y
Sbjct: 385 NGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQ---YFHS 441
Query: 361 CGYDSDVHIGT----ALVDMYAKCGSLKHA-RLAYKRISTPDLVSQNAMLTAYAMHGHGK 415
G+D + + T LVD+ + G L+ A + K S P++V+ ++L A +H
Sbjct: 442 LGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPSEPEIVTWASLLGACRVHKDLD 501
Query: 416 EGIAHFRRIL 425
G R++L
Sbjct: 502 RGKLAARKLL 511
>gi|125548358|gb|EAY94180.1| hypothetical protein OsI_15952 [Oryza sativa Indica Group]
Length = 655
Score = 314 bits (804), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 183/601 (30%), Positives = 302/601 (50%), Gaps = 62/601 (10%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y +CG + +A+++F +P+R+ VSWN++V+ A NG+V A E + M D+ VS
Sbjct: 106 YARCGRVAEARELFNRIPDRNVVSWNAMVSGYARNGMVKRARELFDMMPWRDD-----VS 160
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W +I G+ + + EA + M + P +++L L + + G +
Sbjct: 161 WLTMISGYIKRKHVREARELFDSMPS----PPTSVCNALLSGYVELGYMRAAEVLFGQMQ 216
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
NP N ++ Y R G M A ++F + K+ +S I+ GY +NG+V A +
Sbjct: 217 TR----NPVSWNVMITGYARAGSMGIAQRLFDEMPEKDVLSRTAIMRGYLQNGSVDAAWK 272
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
+F M H R ++WN+M+ G+V N D+A +F ++ RD I
Sbjct: 273 VFKDMPH----RDTVAWNTMMDGFVRNDRLDDALKLFSEMPDRDQIS------------- 315
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK 301
A+++ Y + D+ +A + F N + +
Sbjct: 316 ---------------------------WHAILQGYVQQGDMDSANVWFPRAPNKDAISWN 348
Query: 302 MKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRC 361
G++ A+ L SEM+ L PD T+ +++S C+SL ++ GK VH +AI+
Sbjct: 349 TLISGYKDE----GALSLLSEMIRGGLKPDQATLSVVISICASLVSLGCGKMVHLWAIKT 404
Query: 362 GYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHF 421
G++ D + ++L+ MY+KCG + A ++ I D V+ NAM+ YA HG E + F
Sbjct: 405 GFEHDALVMSSLISMYSKCGLISEASQVFELILQRDTVTWNAMIATYAYHGLADEALKVF 464
Query: 422 RRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSR 480
+ +GFRPDH +FLS LSAC H G + G F M +++ P HY+CMVDLL R
Sbjct: 465 DMMTKAGFRPDHATFLSILSACAHKGYLYEGCYHFRSMQEDWNLVPRSDHYSCMVDLLGR 524
Query: 481 AGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVML 540
+G + +AY+F ++IP + W L C SHG ++ G+I A +++ P++ G Y +L
Sbjct: 525 SGFIHQAYDFTRRIPSDHRTTAWETLFSACNSHGEIQLGEIIARNVLKARPSDGGMYTLL 584
Query: 541 ANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTII 600
+N++A WS A R MK+R + K GCSWIE + E+ F ++D +H E+I +
Sbjct: 585 SNIYAAKEMWSSAASVRGFMKERGLKKETGCSWIELKGEVVTFSSNDSNHPLIEQICQEV 644
Query: 601 D 601
D
Sbjct: 645 D 645
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 90/414 (21%), Positives = 167/414 (40%), Gaps = 49/414 (11%)
Query: 128 NPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQME 187
N F N +V R + A K+F ++N VS ++ GY G VAEARELF+++
Sbjct: 64 NVFTWNCMVSGLIRNRMLAEARKVFDAMPVRNSVSWAALLTGYARCGRVAEARELFNRIP 123
Query: 188 HLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSL 247
R ++SWN+M+SGY N + A +F + RD + + G + +
Sbjct: 124 ----DRNVVSWNAMVSGYARNGMVKRARELFDMMPWRDDVSWLTMISGYI-----KRKHV 174
Query: 248 RKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGF 307
R+ +E+ + T V AL+ Y + AA++ F +++ + + G+
Sbjct: 175 REARELFDSMPS----PPTSVCNALLSGYVELGYMRAAEVLFGQMQTRNPVSWNVMITGY 230
Query: 308 EPNVYTWNAMQLFSEMLSLDLTPDIYTV------GIILSACSSLATMERGKQVHAYAIRC 361
A +LF EM D+ + G + +A M V +
Sbjct: 231 ARAGSMGIAQRLFDEMPEKDVLSRTAIMRGYLQNGSVDAAWKVFKDMPHRDTVAWNTMMD 290
Query: 362 GY-----------------DSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAM 404
G+ D D A++ Y + G + A + + R D +S N +
Sbjct: 291 GFVRNDRLDDALKLFSEMPDRDQISWHAILQGYVQQGDMDSANVWFPRAPNKDAISWNTL 350
Query: 405 LTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDV 464
++ Y G ++ ++ G +PD + +S C S+ G ++ + +
Sbjct: 351 ISGYKDEG----ALSLLSEMIRGGLKPDQATLSVVISICASLVSLGCGK----MVHLWAI 402
Query: 465 KPSLKH----YTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
K +H + ++ + S+ G + EA + + I + D+V W A++ HG
Sbjct: 403 KTGFEHDALVMSSLISMYSKCGLISEASQVFELI-LQRDTVTWNAMIATYAYHG 455
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG + +A +VF+++ +RD V+WN+++ A +GL EAL+ + M+ P+
Sbjct: 419 MYSKCGLISEASQVFELILQRDTVTWNAMIATYAYHGLADEALKVFDMMTKAGFR-PDHA 477
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE 88
++ +++ GY E MQ +
Sbjct: 478 TFLSILSACAHKGYLYEGCYHFRSMQED 505
>gi|357493705|ref|XP_003617141.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518476|gb|AET00100.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 684
Score = 314 bits (804), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 179/547 (32%), Positives = 290/547 (53%), Gaps = 41/547 (7%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
+V+W+++I G N A+ M+ + ++PN T V A A +Q GK+ H
Sbjct: 72 TVVTWTSLISGCVHNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKASAFVQIPMTGKQIH 131
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
G + G + + FV C DM YC+ G
Sbjct: 132 GLALKGGMIYDVFVGCS-------CFDM------------------------YCKTGFRG 160
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
+A +FD+M QR + +WN+ IS V + +A F++ L G EP S TF +
Sbjct: 161 DACNMFDEMP----QRNLATWNAYISNAVQDRRSLDAIVAFKEFLCVHG-EPNSITFCAF 215
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
L AC DM L G+++HA + G + D V L++ Y + D+V+A+M F+ I N +N
Sbjct: 216 LNACVDMVRLNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEMVFNRIGNRKN 275
Query: 298 LLGKMKE-DGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHA 356
++ N A +F + ++ P + + +LSAC+ L +E G+ VHA
Sbjct: 276 VVSWCSMLAALVQNHEEERACMVFLQARK-EVEPTDFMISSVLSACAELGGLELGRSVHA 334
Query: 357 YAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKE 416
A++ + ++ +G+ALVDMY KCGS+++A + + +LV+ NAM+ YA G
Sbjct: 335 LAVKACVEDNIFVGSALVDMYGKCGSIENAEQVFSELPERNLVTWNAMIGGYAHQGDIDM 394
Query: 417 GIAHFRRIL--ASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTC 473
+ F + + G RP +++ +S LS C G+++ G + F+ M Y ++P +H+ C
Sbjct: 395 ALRLFEEMTLGSHGIRPSYVTLISILSVCSRVGAVERGIQIFESMRLNYGIEPGAEHFAC 454
Query: 474 MVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNN 533
+VDLL R+G + AYEFI+ + + P +WGALLG C HG E G+IAA++L EL+ +
Sbjct: 455 VVDLLGRSGLVDRAYEFIQNMAIQPTISVWGALLGACRMHGKTELGKIAAEKLFELDHVD 514
Query: 534 TGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRS 593
+GN+V+L+N+ A AGRW + R++MKD + K+ G SWI ++ IH F+A D SHDR+
Sbjct: 515 SGNHVVLSNMLASAGRWEEATVVRKEMKDIGIKKNVGYSWIAVKNRIHVFQAKDSSHDRN 574
Query: 594 EEIYTII 600
EI ++
Sbjct: 575 SEIQAML 581
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 108/239 (45%), Gaps = 38/239 (15%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
YGKCG + A+ VF + R N+VS
Sbjct: 254 YGKCGDIVSAEMVFNRIGNRK-----------------------------------NVVS 278
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W +++ QN ++EE M+F + +EP +SSVL ACA L L LG+ H
Sbjct: 279 WCSMLAALVQN-HEEERACMVFLQARKEVEPTDFMISSVLSACAELGGLELGRSVHALAV 337
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
+ N FV + LVD+Y +CG + +A ++FS+ +N V+ N +I GY G++ A
Sbjct: 338 KACVEDNIFVGSALVDMYGKCGSIENAEQVFSELPERNLVTWNAMIGGYAHQGDIDMALR 397
Query: 182 LFDQME--HLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
LF++M G++ ++ S++S + +F + + GIEP + F V+
Sbjct: 398 LFEEMTLGSHGIRPSYVTLISILSVCSRVGAVERGIQIFESMRLNYGIEPGAEHFACVV 456
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 63/118 (53%), Gaps = 2/118 (1%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNET-PNL 59
MYGKCGS+++A++VF +PER+ V+WN+++ A G + AL E M+ + P+
Sbjct: 354 MYGKCGSIENAEQVFSELPERNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGSHGIRPSY 413
Query: 60 VSWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEF 116
V+ +++ ++ G E I + M+ G+EP A + V+ R + EF
Sbjct: 414 VTLISILSVCSRVGAVERGIQIFESMRLNYGIEPGAEHFACVVDLLGRSGLVDRAYEF 471
>gi|449448280|ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
gi|449513125|ref|XP_004164238.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
Length = 645
Score = 314 bits (804), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 169/443 (38%), Positives = 252/443 (56%), Gaps = 45/443 (10%)
Query: 195 IISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIH 254
+ S++++I +V + L+D AF + +L G+EP +FTF SVL +C SL GK +H
Sbjct: 110 VFSFSAIIHSHVQSRLFDRAFGYYSQML-SCGVEPNAFTFSSVLKSC----SLESGKVLH 164
Query: 255 ALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFD---------------------EIE 293
AI LGL SD +V LV++Y R D+V A+ FD E++
Sbjct: 165 CQAIKLGLGSDLYVRTGLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELD 224
Query: 294 NIENLLGKMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIIL 339
+L MKE +V WN M +LF ML P+ TV +L
Sbjct: 225 KARSLFEGMKER----DVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVL 280
Query: 340 SACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLV 399
SAC L +E G+ +H+Y G +VH+GTAL+DMY+KCGSL+ ARL + RI D+V
Sbjct: 281 SACGQLGALESGRWIHSYIENKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVV 340
Query: 400 SQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM 459
+ N+M+ YAMHG + + F + +G +P I+F+ LSAC H G ++ G FF LM
Sbjct: 341 AWNSMIVGYAMHGFSQHALQLFEEMTETGHKPTDITFIGILSACGHGGLVEEGRSFFRLM 400
Query: 460 A-YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEF 518
Y ++P ++HY CMV+LL RAG L EAY +K + +A D V+WG LLG C H N++
Sbjct: 401 RDKYGIEPKIEHYGCMVNLLGRAGHLEEAYGLVKNMTIAADPVLWGTLLGCCRLHVNIKL 460
Query: 519 GQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRD 578
G+ A L++ + N+G YV+L+N++A G W +A+ R MK+ + K GCS IE +
Sbjct: 461 GEEIAKFLVDQKLANSGTYVLLSNMYAATGNWEGVAKMRTLMKEHGIEKEHGCSSIEVDN 520
Query: 579 EIHKFRASDRSHDRSEEIYTIID 601
++H+F A +R H +S+EIY +++
Sbjct: 521 KVHEFVAGERKHPKSKEIYVMLN 543
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 118/372 (31%), Positives = 192/372 (51%), Gaps = 15/372 (4%)
Query: 55 ETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGK 114
+ PN+ S+SA+I Q+ + A G +M + G+EPNA T SSVL +C+ L GK
Sbjct: 106 DEPNVFSFSAIIHSHVQSRLFDRAFGYYSQMLSCGVEPNAFTFSSVLKSCS----LESGK 161
Query: 115 EFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
H + G S+ +V GLVDVY R GD++ A ++F K ++ VS T++ Y + G
Sbjct: 162 VLHCQAIKLGLGSDLYVRTGLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMG 221
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTF 234
+ +AR LF+ M+ +R ++ WN MI GY + + +E+ +FR +L+ I P T
Sbjct: 222 ELDKARSLFEGMK----ERDVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKAI-PNEVTV 276
Query: 235 GSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIEN 294
+VL AC + +L G+ IH+ G+Q + VG AL++MY + L A++ FD I +
Sbjct: 277 LAVLSACGQLGALESGRWIHSYIENKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRD 336
Query: 295 IENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTP-DIYTVGIILSACSSLATMERGKQ 353
+ + G+ + ++ +A+QLF EM P DI +G ILSAC +E G+
Sbjct: 337 KDVVAWNSMIVGYAMHGFSQHALQLFEEMTETGHKPTDITFIG-ILSACGHGGLVEEGRS 395
Query: 354 -VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNAMLTAYAMH 411
+ G + + +V++ + G L+ A K ++ D V +L +H
Sbjct: 396 FFRLMRDKYGIEPKIEHYGCMVNLLGRAGHLEEAYGLVKNMTIAADPVLWGTLLGCCRLH 455
Query: 412 GHGK--EGIAHF 421
+ K E IA F
Sbjct: 456 VNIKLGEEIAKF 467
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 84/275 (30%), Positives = 138/275 (50%), Gaps = 12/275 (4%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y + G + A+++F MPER VS +++T + G + +A E M D +V
Sbjct: 185 VYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKARSLFEGMKERD-----VV 239
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
W+ +IGG+ Q+G E++ + RM PN T+ +VL AC +L L G+ H YI
Sbjct: 240 CWNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALESGRWIHSYI 299
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
G N V L+D+Y +CG + A +F + K+ V+ N++IVGY +G A
Sbjct: 300 ENKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHAL 359
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRD--GIEPTSFTFGSVL 238
+LF++M G + I++ ++S L +E S FR LMRD GIEP +G ++
Sbjct: 360 QLFEEMTETGHKPTDITFIGILSACGHGGLVEEGRSFFR--LMRDKYGIEPKIEHYGCMV 417
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALV 273
L +E + L + + +D + G L+
Sbjct: 418 NLLGRAGHL---EEAYGLVKNMTIAADPVLWGTLL 449
>gi|222635654|gb|EEE65786.1| hypothetical protein OsJ_21486 [Oryza sativa Japonica Group]
Length = 749
Score = 314 bits (804), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 191/598 (31%), Positives = 303/598 (50%), Gaps = 74/598 (12%)
Query: 22 DCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGM 81
D + N++VT + NGLV + ER+ D L+SW ++I GF Q G++ EA+ +
Sbjct: 169 DLIVQNALVTMYSKNGLVDDGFMLFERIKDKD-----LISWGSIIAGFAQQGFEMEALQV 223
Query: 82 LFRMQAEGLE-PNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYR 140
M EG PN S AC + G++ HG + + +V L D+Y
Sbjct: 224 FREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMYA 283
Query: 141 RCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNS 200
RC ++ SA F + EA +L +SWNS
Sbjct: 284 RCKNLDSARVAFYRI----------------------EAPDL-------------VSWNS 308
Query: 201 MISGYVDNSLYDEAFSMFRDLLMRD-GIEPTSFTFGSVLIACADMNSLRKGKEIHALAIA 259
+++ Y L EA +F + MRD G+ P T +L AC ++L G+ IH+ +
Sbjct: 309 IVNAYSVEGLLSEALVLFSE--MRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVK 366
Query: 260 LGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNA--- 316
LGL D V +L+ MY R DL +A F EI+ + +V TWN+
Sbjct: 367 LGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIK--------------DQDVVTWNSILT 412
Query: 317 -----------MQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDS 365
++LFS + + + D ++ +LSA + L E KQVHAYA + G
Sbjct: 413 ACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVD 472
Query: 366 DVHIGTALVDMYAKCGSLKHA-RLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRI 424
D + L+D YAKCGSL A RL + D+ S ++++ YA G+ KE F R+
Sbjct: 473 DRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEAFDLFSRM 532
Query: 425 LASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMVDLLSRAGE 483
+ G RP+H++F+ L+AC G + G ++ +M Y + P+ +H +C+VDLL+RAG+
Sbjct: 533 RSLGIRPNHVTFIGVLTACSRVGFVNEGCYYYSIMEPEYGIVPTREHCSCIVDLLARAGK 592
Query: 484 LGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANL 543
L EA FI ++P PD +MW LL H ++E G+ AA+ ++ ++P+++ YV+L N+
Sbjct: 593 LTEAANFIDQMPFEPDIIMWKTLLAASKMHNDMEMGKRAAEGILNIDPSHSAAYVLLCNI 652
Query: 544 FAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
+A +G W++ AR ++ M+ + KSPG SW++ + E+ F DRSH SEEIY +++
Sbjct: 653 YAASGNWNEFARLKKAMRTSGVKKSPGKSWVKLKGELKVFIVEDRSHPESEEIYAMLE 710
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 134/497 (26%), Positives = 215/497 (43%), Gaps = 73/497 (14%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
N VSW++VI QNG +A+G+ M G + L S + AC L + G++ H
Sbjct: 99 NPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELGDVGTGRQVH 158
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
+ ++ S+ V N LV +Y + G + +F + K+ +S +II G+ + G
Sbjct: 159 AHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAGFAQQG--- 215
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
F+ EA +FR++++ P F FGS
Sbjct: 216 -----FEM---------------------------EALQVFREMIVEGSHHPNEFHFGSA 243
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
AC + S G++IH L+I L D +VG +L +MY R ++L +A++AF IE
Sbjct: 244 FRACGAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMYARCKNLDSARVAFYRIE---- 299
Query: 298 LLGKMKEDGFEPNVYTWN--------------AMQLFSEMLSLDLTPDIYTVGIILSACS 343
P++ +WN A+ LFSEM L PD TV +L AC
Sbjct: 300 ----------APDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVRGLLCACV 349
Query: 344 SLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNA 403
+ G+ +H+Y ++ G D DV + +L+ MYA+C L A + I D+V+ N+
Sbjct: 350 GRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNS 409
Query: 404 MLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYD 463
+LTA A H H +E + F + S D IS + LSA G E + Y
Sbjct: 410 ILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSASAELGYF----EMVKQVHAYA 465
Query: 464 VKPSLKH----YTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE-- 517
K L ++D ++ G L +A + + D W +L+ G G +
Sbjct: 466 FKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEA 525
Query: 518 FGQIAADRLIELEPNNT 534
F + R + + PN+
Sbjct: 526 FDLFSRMRSLGIRPNHV 542
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 96/326 (29%), Positives = 162/326 (49%), Gaps = 3/326 (0%)
Query: 193 RGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKE 252
R +SW S+I+ +V N +A +F +L R G F GS + AC ++ + G++
Sbjct: 98 RNPVSWASVIAAHVQNGRAGDALGLFSSML-RSGTAADQFALGSAVRACTELGDVGTGRQ 156
Query: 253 IHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVY 312
+HA A+ SD V ALV MY + + M F+ I++ + + GF +
Sbjct: 157 VHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAGFAQQGF 216
Query: 313 TWNAMQLFSEML-SLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGT 371
A+Q+F EM+ P+ + G AC ++ + E G+Q+H +I+ D D+++G
Sbjct: 217 EMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDLYVGC 276
Query: 372 ALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRP 431
+L DMYA+C +L AR+A+ RI PDLVS N+++ AY++ G E + F + SG RP
Sbjct: 277 SLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRP 336
Query: 432 DHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFI 491
D I+ L ACV ++ G + + + ++ + +R +L A +
Sbjct: 337 DGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVF 396
Query: 492 KKIPMAPDSVMWGALLGGCVSHGNLE 517
+I D V W ++L C H + E
Sbjct: 397 HEIK-DQDVVTWNSILTACAQHNHPE 421
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 103/419 (24%), Positives = 170/419 (40%), Gaps = 85/419 (20%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +C +LD A+ F + D VSWNS+V A + GL+ EAL
Sbjct: 281 MYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEAL----------------- 323
Query: 61 SWSAVIGGFTQNGYDEEAIGMLF-RMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
+LF M+ GL P+ T+ +L AC L G+ H Y
Sbjct: 324 --------------------VLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSY 363
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ + G + V N L+ +Y RC D+ SA+ +F + ++ V+ N+I+ ++ + E
Sbjct: 364 LVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEV 423
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPT--SFTFGSV 237
+LF SL +++ EP+ + +V
Sbjct: 424 LKLF-------------------------SLLNKS-------------EPSLDRISLNNV 445
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
L A A++ K++HA A GL D + L++ Y + L A F+ + N +
Sbjct: 446 LSASAELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRD 505
Query: 298 LLG-KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHA 356
+ G+ Y A LFS M SL + P+ T +L+ACS + + G +
Sbjct: 506 VFSWSSLIVGYAQFGYAKEAFDLFSRMRSLGIRPNHVTFIGVLTACSRVGFVNEG--CYY 563
Query: 357 YAI---RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNAMLTAYAMH 411
Y+I G + +VD+ A+ G L A ++ PD++ +L A MH
Sbjct: 564 YSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLLAASKMH 622
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 130/286 (45%), Gaps = 34/286 (11%)
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALG-------LQSDTFVGGALVEMYCR----YQDL 282
+ +++ AC+ + SL +G+ +H +A L +T +G L+ MY R + +
Sbjct: 47 YAALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRNPVSWASV 106
Query: 283 VAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSAC 342
+AA + N +A+ LFS ML D + +G + AC
Sbjct: 107 IAAHV---------------------QNGRAGDALGLFSSMLRSGTAADQFALGSAVRAC 145
Query: 343 SSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQN 402
+ L + G+QVHA+A++ SD+ + ALV MY+K G + + ++RI DL+S
Sbjct: 146 TELGDVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWG 205
Query: 403 AMLTAYAMHGHGKEGIAHFRRILASG-FRPDHISFLSALSACVHAGSIKTGSEFFDLMAY 461
+++ +A G E + FR ++ G P+ F SA AC GS + G + L
Sbjct: 206 SIIAGFAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIK 265
Query: 462 YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALL 507
Y + L + D+ +R L A +I APD V W +++
Sbjct: 266 YRLDRDLYVGCSLSDMYARCKNLDSARVAFYRIE-APDLVSWNSIV 310
>gi|225470674|ref|XP_002269391.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 587
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 191/613 (31%), Positives = 305/613 (49%), Gaps = 75/613 (12%)
Query: 4 KCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWS 63
+CG L V K + D N V+ A G A + + M NLVSWS
Sbjct: 20 RCG-LSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEMFE-----KNLVSWS 73
Query: 64 AVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRN 123
A+I G+ Q G + AI + +M L PN +SV+ ACA L ++LG++ H +
Sbjct: 74 AMISGYDQAGEPQMAIDLYSQM---FLVPNEYVFASVISACASLSAVTLGQKIHSRSLKF 130
Query: 124 GFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELF 183
G+ S FV N L+ +Y +C AL +F+ E +C
Sbjct: 131 GYESISFVSNSLISMYMKCNQCSDALSVFTN---TPEPNC-------------------- 167
Query: 184 DQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACAD 243
+S+N++I+G+V+N + F+ L+ + G+ P F F VL C
Sbjct: 168 ------------VSYNALITGFVENQQLERGLEFFK-LMRQQGLIPDRFAFMGVLGICTT 214
Query: 244 MNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMK 303
+L++G E+H + L L S F+G ++ MY + A+ AF IE
Sbjct: 215 TENLKRGAELHCQTVKLNLDSTPFIGNVIITMYSELNLIQEAEKAFRLIE---------- 264
Query: 304 EDGFEPNVYTWNAM--------------QLFSEMLS-LDLTPDIYTVGIILSACSSLATM 348
E +V +WN + ++F M ++ PD +T L+AC+ LA+M
Sbjct: 265 ----EKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLASM 320
Query: 349 ERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAY 408
GKQ+HA+ +R D+ +G ALV+MYAKCG + +A + ++ +LVS N ++ +
Sbjct: 321 SHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIAGF 380
Query: 409 AMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPS 467
HG G+ + F ++ ASG RPD ++F+ L+AC HAG + G +F+ M Y + P
Sbjct: 381 GNHGLGERAVELFEQMNASGIRPDSVTFIGLLTACNHAGLVDKGQLYFNSMEETYGIAPD 440
Query: 468 LKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLI 527
++H++C++D+L RAG L EA E+++K P D V+ +LL HG++ G+ A L+
Sbjct: 441 IEHFSCLIDMLGRAGRLNEAEEYMRKFPFWNDPVVLVSLLSASRLHGDVVIGERLAKWLL 500
Query: 528 ELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASD 587
+L+P T YV+L+NL+A G W +A R+++K + K PG S IE + KF D
Sbjct: 501 KLQPVTTSPYVLLSNLYASDGMWDSVAEARKRLKGSGLKKEPGHSLIEVNGSVEKFTIGD 560
Query: 588 RSHDRSEEIYTII 600
+H R +EI I+
Sbjct: 561 FTHLRIKEIKGIL 573
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 132/292 (45%), Gaps = 32/292 (10%)
Query: 233 TFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI 292
T S+L C+ +LR G +HA + G QSD F+ ++ MY + A+ FDE+
Sbjct: 5 TLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEM 64
Query: 293 ENIENLLGKMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGII 338
FE N+ +W+AM L+S+M L P+ Y +
Sbjct: 65 --------------FEKNLVSWSAMISGYDQAGEPQMAIDLYSQMF---LVPNEYVFASV 107
Query: 339 LSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDL 398
+SAC+SL+ + G+++H+ +++ GY+S + +L+ MY KC A + P+
Sbjct: 108 ISACASLSAVTLGQKIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNC 167
Query: 399 VSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDL 458
VS NA++T + + + G+ F+ + G PD +F+ L C ++K G+E
Sbjct: 168 VSYNALITGFVENQQLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQ 227
Query: 459 MAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGC 510
++ + ++ + S + EA + + I D + W L+ C
Sbjct: 228 TVKLNLDSTPFIGNVIITMYSELNLIQEAEKAFRLIE-EKDVISWNTLIAAC 278
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 98/421 (23%), Positives = 164/421 (38%), Gaps = 87/421 (20%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC DA VF PE +CVS+N+++T
Sbjct: 145 MYMKCNQCSDALSVFTNTPEPNCVSYNALIT----------------------------- 175
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
GF +N E + M+ +GL P+ VL C + L G E H
Sbjct: 176 -------GFVENQQLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQT 228
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVG--YCENGNVAE 178
+ S PF+ N ++ +Y + A K F K+ +S NT+I +C++
Sbjct: 229 VKLNLDSTPFIGNVIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDD----- 283
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
+ + +F+ + + P FTF S L
Sbjct: 284 --------------------------------HAKGLRVFKHMTEETNVRPDDFTFTSAL 311
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCR-----YQDLVAAQMAFDEIE 293
ACA + S+ GK+IHA + L D VG ALV MY + Y + ++M +
Sbjct: 312 AACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYDIFSKMVHHNLV 371
Query: 294 NIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGK- 352
+ ++ GF + A++LF +M + + PD T +L+AC+ +++G+
Sbjct: 372 SWNTIIA-----GFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTACNHAGLVDKGQL 426
Query: 353 QVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST-PDLVSQNAMLTAYAMH 411
++ G D+ + L+DM + G L A ++ D V ++L+A +H
Sbjct: 427 YFNSMEETYGIAPDIEHFSCLIDMLGRAGRLNEAEEYMRKFPFWNDPVVLVSLLSASRLH 486
Query: 412 G 412
G
Sbjct: 487 G 487
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 72/149 (48%), Gaps = 9/149 (6%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG + A +F M + VSWN+++ +GL A+E E+M++ P+ V
Sbjct: 348 MYAKCGCIGYAYDIFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNA-SGIRPDSV 406
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE---GLEPNARTLSSVLPACARLQKLSLGKEFH 117
++ ++ G ++ G L+ E G+ P+ S ++ R +L+ +E
Sbjct: 407 TFIGLLTACNHAGLVDK--GQLYFNSMEETYGIAPDIEHFSCLIDMLGRAGRLNEAEE-- 462
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDML 146
Y+ + F ++P V+ L+ R GD++
Sbjct: 463 -YMRKFPFWNDPVVLVSLLSASRLHGDVV 490
>gi|20146256|dbj|BAB89038.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|125571007|gb|EAZ12522.1| hypothetical protein OsJ_02419 [Oryza sativa Japonica Group]
Length = 1062
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 186/602 (30%), Positives = 301/602 (50%), Gaps = 77/602 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG++D A +VF++M RD +
Sbjct: 427 MYAKCGAIDKACRVFQLMEARD------------------------------------RI 450
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ +I QNGY E A+ M+ + P+ S L +CA L L+ G++ H
Sbjct: 451 SWNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLGLLAAGQQLHCDA 510
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G + V N LV +Y CG M +E
Sbjct: 511 VKWGLYLDTSVSNALVKMYGECGRM-------------------------------SECW 539
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDN-SLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
E+F+ M ++SWNS++ + + E+ +F ++ M+ G+ P TF + L
Sbjct: 540 EIFNSMS----AHDVVSWNSIMGVMASSQAPITESVQVFSNM-MKSGLVPNKVTFVNFLA 594
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
A ++ L GK+IH++ + G+ D V AL+ Y + D+ + + F + + +
Sbjct: 595 ALTPLSVLELGKQIHSVMLKHGVTEDNAVDNALMSCYAKSGDVDSCERLFSRMSGRRDAI 654
Query: 300 G-KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYA 358
G+ N + AM M+ + D T I+L+AC+S+A +ERG ++HA+
Sbjct: 655 SWNSMISGYIYNGHLQEAMDCVCLMMHSEQMMDHCTFSIVLNACASVAALERGMEMHAFG 714
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGI 418
+R +SDV + +ALVDMY+KCG + +A + +S + S N+M++ YA HG G++ +
Sbjct: 715 LRSHLESDVVVESALVDMYSKCGRIDYASKVFHSMSQKNEFSWNSMISGYARHGLGRKAL 774
Query: 419 AHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLL 478
F + SG PDH++F+S LSAC HAG ++ G ++F+LM Y + P ++HY+C++DLL
Sbjct: 775 EIFEEMQESGESPDHVTFVSVLSACSHAGLVERGLDYFELMEDYGILPRIEHYSCVIDLL 834
Query: 479 SRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVS---HGNLEFGQIAADRLIELEPNNTG 535
RAGEL + E++K++PM P++++W +L C ++ G A+ L+ELEP N
Sbjct: 835 GRAGELDKIQEYMKRMPMKPNTLIWRTVLVACQQSKHRAKIDLGTEASRMLLELEPQNPV 894
Query: 536 NYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEE 595
NYV+ + A GRW D A+ R MK + K G SW+ D +H F A DRSH ++E
Sbjct: 895 NYVLSSKFHAAIGRWEDTAKARAAMKGAAVKKEAGRSWVTLTDGVHTFIAGDRSHPNTKE 954
Query: 596 IY 597
IY
Sbjct: 955 IY 956
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 125/604 (20%), Positives = 229/604 (37%), Gaps = 131/604 (21%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y K LD A++VF MP R N VS
Sbjct: 110 YAKGARLDAARRVFDGMPGR------------------------------------NAVS 133
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEG--LEPNARTLSSVLPAC--ARLQKLSLGKEFH 117
W+ +I G +G E+A + M EG P + T SVL AC + +L + H
Sbjct: 134 WTCLISGHVLSGLPEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVH 193
Query: 118 GYITRNGFMSNPFVV---------------------------------NGLVDVYRRCGD 144
G +++ F SN V N L+ VY + GD
Sbjct: 194 GLVSKTEFTSNTTVCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKRGD 253
Query: 145 MLSALKIFSKFSIKNE--------------------VSCN-------------------- 164
+ +F + SC+
Sbjct: 254 AICTFTLFRAMQYDDSGIELRPTEHTFGSLITATYLSSCSLGLLDQLFVRVLKSGCSSDL 313
Query: 165 ----TIIVGYCENGNVAEARELFDQMEHLGV-QRGIISWNSMISGYVDNSLYDEAFSMFR 219
++ + +G + EA++++ LG+ +R ++ N +I+G V + A +F
Sbjct: 314 YVGSALVSAFARHGMLDEAKDIY-----LGLKERNAVTLNGLIAGLVKQQHGEAAAEIF- 367
Query: 220 DLLMRDGIEPTSFTFGSVLIACADMNS----LRKGKEIHALAIALG-LQSDTFVGGALVE 274
+ RD T+ +L A A+ ++ LRKG+E+HA + G + V LV
Sbjct: 368 -MGARDSAAVNVDTYVVLLSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVN 426
Query: 275 MYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYT 334
MY + + A F +E + + + N Y AM + M + P +
Sbjct: 427 MYAKCGAIDKACRVFQLMEARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFA 486
Query: 335 VGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS 394
LS+C+ L + G+Q+H A++ G D + ALV MY +CG + + +S
Sbjct: 487 AISGLSSCAGLGLLAAGQQLHCDAVKWGLYLDTSVSNALVKMYGECGRMSECWEIFNSMS 546
Query: 395 TPDLVSQNAMLTAYA-MHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGS 453
D+VS N+++ A E + F ++ SG P+ ++F++ L+A ++ G
Sbjct: 547 AHDVVSWNSIMGVMASSQAPITESVQVFSNMMKSGLVPNKVTFVNFLAALTPLSVLELGK 606
Query: 454 EFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSH 513
+ +M + V ++ +++G++ ++ D++ W +++ G + +
Sbjct: 607 QIHSVMLKHGVTEDNAVDNALMSCYAKSGDVDSCERLFSRMSGRRDAISWNSMISGYIYN 666
Query: 514 GNLE 517
G+L+
Sbjct: 667 GHLQ 670
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 129/277 (46%), Gaps = 44/277 (15%)
Query: 164 NTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLM 223
N ++ Y + + AR +FD M R +SW +ISG+V + L ++AF +FR +L
Sbjct: 104 NHLVNSYAKGARLDAARRVFDGMP----GRNAVSWTCLISGHVLSGLPEDAFPLFRAMLR 159
Query: 224 R-DGIEPTSFTFGSVLIACADMNSLRKG--KEIHALAIALGLQSDTFVGGALVEMY--CR 278
G PTSFTFGSVL AC D R G ++H L S+T V AL+ MY C
Sbjct: 160 EGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTSNTTVCNALISMYGSCS 219
Query: 279 YQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAM--------------QLFSEML 324
+ AQ FD + +L+ TWNA+ LF M
Sbjct: 220 VGPPILAQRVFDTTP-VRDLI-------------TWNALMSVYAKRGDAICTFTLFRAMQ 265
Query: 325 ----SLDLTPDIYTVGIILSACSSLATMERG--KQVHAYAIRCGYDSDVHIGTALVDMYA 378
++L P +T G +++A + L++ G Q+ ++ G SD+++G+ALV +A
Sbjct: 266 YDDSGIELRPTEHTFGSLITA-TYLSSCSLGLLDQLFVRVLKSGCSSDLYVGSALVSAFA 324
Query: 379 KCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGK 415
+ G L A+ Y + + V+ N ++ HG+
Sbjct: 325 RHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGE 361
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 122/309 (39%), Gaps = 18/309 (5%)
Query: 251 KEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPN 310
+ +H + GL D F+ LV Y + L AA+ FD + + G +
Sbjct: 85 ESLHLEVVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHVLS 144
Query: 311 VYTWNAMQLFSEML--SLDLTPDIYTVGIILSACSSLATMERG--KQVHAYAIRCGYDSD 366
+A LF ML P +T G +L AC G QVH + + S+
Sbjct: 145 GLPEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTSN 204
Query: 367 VHIGTALVDMYAKC--GSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRI 424
+ AL+ MY C G A+ + DL++ NA+++ YA G FR +
Sbjct: 205 TTVCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKRGDAICTFTLFRAM 264
Query: 425 LA--SG--FRPDHISFLSALSAC-VHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLS 479
SG RP +F S ++A + + S+ + F + L + +V +
Sbjct: 265 QYDDSGIELRPTEHTFGSLITATYLSSCSLGLLDQLFVRVLKSGCSSDLYVGSALVSAFA 324
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPN---NTGN 536
R G L EA + + ++V L+ G V + G+ AA+ + + N
Sbjct: 325 RHGMLDEAKDIYLGLK-ERNAVTLNGLIAGLVKQ---QHGEAAAEIFMGARDSAAVNVDT 380
Query: 537 YVMLANLFA 545
YV+L + A
Sbjct: 381 YVVLLSAIA 389
>gi|359480506|ref|XP_003632478.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 590
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 185/595 (31%), Positives = 305/595 (51%), Gaps = 89/595 (14%)
Query: 3 GKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSW 62
+ G++ A+++F MP RD VSWNS++T NG E+ M T N+VSW
Sbjct: 58 ARAGNIGAARQLFDEMPHRDTVSWNSIITGYWKNGCFDESKRLFGLMP-----TKNVVSW 112
Query: 63 SAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITR 122
+++I G ++ +EA + F R
Sbjct: 113 NSMIAGCIEDERIDEA----------------------------------WQYFQAMPQR 138
Query: 123 NGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAREL 182
N N +++GLV R + A ++F + +N +S ++ GY + G + +AR L
Sbjct: 139 NTASWNA-MISGLV----RYDRVEEASRLFEEMPRRNVISYTAMVDGYAKIGEIEQARAL 193
Query: 183 FDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACA 242
F+ M Q+ ++SW MISGYV+N +DEA ++F +
Sbjct: 194 FNCMP----QKNVVSWTVMISGYVENGKFDEAENLFEQM--------------------- 228
Query: 243 DMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKM 302
K I A+ A++ YC+ A++ FD+I +
Sbjct: 229 ------PDKNIVAMT-------------AMITGYCKEGKTDKAKILFDQIPCRDLASWNA 269
Query: 303 KEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCG 362
G+ N A++L S+ML + + PD T+ +L+ACSSLA+++ G++ H ++ G
Sbjct: 270 MITGYAQNGSGEEALKLHSQMLKMGMQPDHSTLISVLTACSSLASLQEGRKTHVLVLKSG 329
Query: 363 YDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFR 422
Y+S + I AL+ MY KCGS+ + LA+++I PD+VS NAM+ A+A HG +A F
Sbjct: 330 YESRISICNALITMYCKCGSILDSELAFRQIDHPDVVSWNAMIAAFARHGFYDRALASFG 389
Query: 423 RILASGFRPDHISFLSALSACVHAGSIKTGSEFFD-LMAYYDVKPSLKHYTCMVDLLSRA 481
+ ++ PD I+FLS LSAC HAG + +F+ ++ Y + P +H+ C+VD+LSR
Sbjct: 390 EMRSNRVEPDGITFLSLLSACGHAGKVHESLNWFNSMIESYKIVPRPEHFACLVDILSRG 449
Query: 482 GELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLA 541
G++ +AY+ I+++P D +WGALL C H N++ G++AA +++ELEP N+G YV+L+
Sbjct: 450 GQVEKAYKIIQEMPFEADCGIWGALLAACHVHLNVKLGELAAKKIVELEPQNSGAYVVLS 509
Query: 542 NLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEI 596
N++A AG W ++ R R M+++ + K P SW+E +++H F D SH I
Sbjct: 510 NIYAAAGMWGEVTRVRGLMREQGVKKQPAYSWMEIDNKVHFFLGDDASHPEIHRI 564
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 101/355 (28%), Positives = 175/355 (49%), Gaps = 46/355 (12%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y K G D++K++F +MP ++ VSWNS++ C + + EA + + M N S
Sbjct: 88 YWKNGCFDESKRLFGLMPTKNVVSWNSMIAGCIEDERIDEAWQYFQAMPQR-----NTAS 142
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W+A+I G + EEA R+ E N + ++++ A++ ++ + +
Sbjct: 143 WNAMISGLVRYDRVEEA----SRLFEEMPRRNVISYTAMVDGYAKIGEIEQARALFNCMP 198
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
+ +S +++G V+ G A +F + KN V+ +I GYC+ G +A+
Sbjct: 199 QKNVVSWTVMISGYVE----NGKFDEAENLFEQMPDKNIVAMTAMITGYCKEGKTDKAKI 254
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
LFDQ+ R + SWN+MI+GY N +EA + +L + G++P T SVL AC
Sbjct: 255 LFDQIP----CRDLASWNAMITGYAQNGSGEEALKLHSQML-KMGMQPDHSTLISVLTAC 309
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK 301
+ + SL++G++ H L + G +S + AL+ MYC+ ++ +++AF +I++
Sbjct: 310 SSLASLQEGRKTHVLVLKSGYESRISICNALITMYCKCGSILDSELAFRQIDH------- 362
Query: 302 MKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSAC 342
P+V +WNAM F EM S + PD T +LSAC
Sbjct: 363 -------PDVVSWNAMIAAFARHGFYDRALASFGEMRSNRVEPDGITFLSLLSAC 410
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 150/324 (46%), Gaps = 35/324 (10%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSS---------- 51
Y K G ++ A+ +F MP+++ VSW +++ NG EA E+M
Sbjct: 181 YAKIGEIEQARALFNCMPQKNVVSWTVMISGYVENGKFDEAENLFEQMPDKNIVAMTAMI 240
Query: 52 --------------LDNETP--NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNAR 95
L ++ P +L SW+A+I G+ QNG EEA+ + +M G++P+
Sbjct: 241 TGYCKEGKTDKAKILFDQIPCRDLASWNAMITGYAQNGSGEEALKLHSQMLKMGMQPDHS 300
Query: 96 TLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKF 155
TL SVL AC+ L L G++ H + ++G+ S + N L+ +Y +CG +L + F +
Sbjct: 301 TLISVLTACSSLASLQEGRKTHVLVLKSGYESRISICNALITMYCKCGSILDSELAFRQI 360
Query: 156 SIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAF 215
+ VS N +I + +G A F +M V+ I++ S++S E+
Sbjct: 361 DHPDVVSWNAMIAAFARHGFYDRALASFGEMRSNRVEPDGITFLSLLSACGHAGKVHESL 420
Query: 216 SMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEI---HALAIALGLQSDTFVGGAL 272
+ F ++ I P F ++ + L +G ++ + + + ++D + GAL
Sbjct: 421 NWFNSMIESYKIVPRPEHFACLV------DILSRGGQVEKAYKIIQEMPFEADCGIWGAL 474
Query: 273 VEMYCRYQDLVAAQMAFDEIENIE 296
+ + ++ ++A +I +E
Sbjct: 475 LAACHVHLNVKLGELAAKKIVELE 498
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 66/172 (38%), Gaps = 37/172 (21%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGS+ D++ F+ + D VSWN+++ A
Sbjct: 343 MYCKCGSILDSELAFRQIDHPDVVSWNAMIAA---------------------------- 374
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLG-KEFHGY 119
F ++G+ + A+ M++ +EP+ T S+L AC K+ F+
Sbjct: 375 --------FARHGFYDRALASFGEMRSNRVEPDGITFLSLLSACGHAGKVHESLNWFNSM 426
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYC 171
I + P LVD+ R G + A KI + + + ++ C
Sbjct: 427 IESYKIVPRPEHFACLVDILSRGGQVEKAYKIIQEMPFEADCGIWGALLAAC 478
>gi|296081839|emb|CBI20844.3| unnamed protein product [Vitis vinifera]
Length = 700
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 169/524 (32%), Positives = 285/524 (54%), Gaps = 41/524 (7%)
Query: 55 ETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGK 114
E ++V+W+ +I G+ QN Y+EEAI + ++M+ EG +PN T VL A + ++G+
Sbjct: 208 ENKDIVAWNTMITGYAQNCYEEEAIELFYQMELEGFKPNDTTFCCVLKASTAMSDSAVGR 267
Query: 115 EFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
FH + + G + FV LVD+Y + D+ + F + S
Sbjct: 268 CFHAKVLKLGCSMDVFVATALVDMYSKFYDIEDVERAFGEMS------------------ 309
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTF 234
+R ++S+N++I+GY Y+EA ++ L +G+EP SFTF
Sbjct: 310 -----------------KRNLVSFNALITGYSLMGKYEEALRVYSQL-QSEGMEPDSFTF 351
Query: 235 GSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMY--CRYQDLVAAQMAFDEI 292
+ +C+ +++ +G ++H ++ GL SD VG ++V Y C + D +A AF+ I
Sbjct: 352 VGLFSSCSVSSTVAEGAQVHVHSVKFGLDSDVSVGNSIVNFYSKCGFTD--SALEAFESI 409
Query: 293 ENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGK 352
++ GF N A+ F +M D ++ ++ A SS A +E+G+
Sbjct: 410 NRPNSVCWAGIISGFAQNGEGEKALMQFCKMRKFIDKTDEFSSSSVIKAVSSWAAVEQGR 469
Query: 353 QVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHG 412
+HA+ ++ G D +++G+A++DMY+KCG ++ A+ + + ++VS N+M+T YA +G
Sbjct: 470 HLHAHVMKSGLDCTIYVGSAVIDMYSKCGMVEDAQKVFSVMPEKNVVSWNSMITGYAQNG 529
Query: 413 HGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHY 471
KE + F+ + +SG P ++F+ L AC HAG ++ G F++LM + Y + PS++H
Sbjct: 530 FCKEALLLFQEMTSSGILPTAVTFVGILFACSHAGLVEEGRNFYNLMVHNYGIPPSMEHC 589
Query: 472 TCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEP 531
TCMVDLL RAG L EA F+ + + +WG+LL C H N + G AA + LEP
Sbjct: 590 TCMVDLLGRAGYLEEAEAFLLSSSFSKEPGIWGSLLSACGVHKNSDVGSRAAQHCLFLEP 649
Query: 532 NNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIE 575
+ + +Y L+N++A WS+++R R MKD + K PGCSWIE
Sbjct: 650 HYSSSYTALSNIYASKELWSEVSRIRDLMKDMGVEKEPGCSWIE 693
Score = 211 bits (537), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 133/463 (28%), Positives = 223/463 (48%), Gaps = 39/463 (8%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
N+V W++ I + G ++A+ +M G+EPNA T S+ + ACA+ + SL H
Sbjct: 5 NVVRWTSKITDNARRGLVDQALSCFLQMLRAGIEPNAITYSATISACAQSTRPSLATSLH 64
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
I + GF + FV +GL+ +Y + + +
Sbjct: 65 CLILKKGFSNQLFVSSGLISMYSK-------------------------------HDRIK 93
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRD---GIEPTSFTF 234
EAR LFD M +R +SWNSMI+GY L +EA +F ++ + + FT
Sbjct: 94 EARFLFDDMP----ERDDVSWNSMIAGYSQRGLNEEACGLFCSMINSCENWKLLVSDFTL 149
Query: 235 GSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIEN 294
+VL AC + R GK +H A+ +G SD FV G+ V MYC+ L A +AFD+IEN
Sbjct: 150 ATVLKACGGLGCSRIGKCVHGYAVKIGFDSDLFVSGSTVYMYCKCGILDMAGLAFDQIEN 209
Query: 295 IENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV 354
+ + G+ N Y A++LF +M P+ T +L A ++++ G+
Sbjct: 210 KDIVAWNTMITGYAQNCYEEEAIELFYQMELEGFKPNDTTFCCVLKASTAMSDSAVGRCF 269
Query: 355 HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHG 414
HA ++ G DV + TALVDMY+K ++ A+ +S +LVS NA++T Y++ G
Sbjct: 270 HAKVLKLGCSMDVFVATALVDMYSKFYDIEDVERAFGEMSKRNLVSFNALITGYSLMGKY 329
Query: 415 KEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCM 474
+E + + ++ + G PD +F+ S+C + ++ G++ + + + +
Sbjct: 330 EEALRVYSQLQSEGMEPDSFTFVGLFSSCSVSSTVAEGAQVHVHSVKFGLDSDVSVGNSI 389
Query: 475 VDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
V+ S+ G A E + I P+SV W ++ G +G E
Sbjct: 390 VNFYSKCGFTDSALEAFESINR-PNSVCWAGIISGFAQNGEGE 431
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 141/529 (26%), Positives = 237/529 (44%), Gaps = 99/529 (18%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K + +A+ +F MPERD VSWNS
Sbjct: 85 MYSKHDRIKEARFLFDDMPERDDVSWNS-------------------------------- 112
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRM----QAEGLEPNARTLSSVLPACARLQKLSLGKEF 116
+I G++Q G +EEA G+ M + L + TL++VL AC L +GK
Sbjct: 113 ----MIAGYSQRGLNEEACGLFCSMINSCENWKLLVSDFTLATVLKACGGLGCSRIGKCV 168
Query: 117 HGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNV 176
HGY + GF S+ FV V +Y +CG + A F + K+ V+ NT+I GY +N
Sbjct: 169 HGYAVKIGFDSDLFVSGSTVYMYCKCGILDMAGLAFDQIENKDIVAWNTMITGYAQNCYE 228
Query: 177 AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGS 236
EA ELF QME +G +P TF
Sbjct: 229 EEAIELFYQME------------------------------------LEGFKPNDTTFCC 252
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
VL A M+ G+ HA + LG D FV ALV+MY ++ D+ + AF E+
Sbjct: 253 VLKASTAMSDSAVGRCFHAKVLKLGCSMDVFVATALVDMYSKFYDIEDVERAFGEMSKRN 312
Query: 297 -----------NLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSL 345
+L+GK +E A++++S++ S + PD +T + S+CS
Sbjct: 313 LVSFNALITGYSLMGKYEE-----------ALRVYSQLQSEGMEPDSFTFVGLFSSCSVS 361
Query: 346 ATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAML 405
+T+ G QVH ++++ G DSDV +G ++V+ Y+KCG A A++ I+ P+ V ++
Sbjct: 362 STVAEGAQVHVHSVKFGLDSDVSVGNSIVNFYSKCGFTDSALEAFESINRPNSVCWAGII 421
Query: 406 TAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVK 465
+ +A +G G++ + F ++ + D S S + A +++ G + +
Sbjct: 422 SGFAQNGEGEKALMQFCKMRKFIDKTDEFSSSSVIKAVSSWAAVEQGRHLHAHVMKSGLD 481
Query: 466 PSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
++ + ++D+ S+ G + +A + +P + V W +++ G +G
Sbjct: 482 CTIYVGSAVIDMYSKCGMVEDAQKVFSVMP-EKNVVSWNSMITGYAQNG 529
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 159/358 (44%), Gaps = 39/358 (10%)
Query: 191 VQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKG 250
++ ++ W S I+ L D+A S F +L R GIEP + T+ + + ACA
Sbjct: 2 LETNVVRWTSKITDNARRGLVDQALSCFLQML-RAGIEPNAITYSATISACAQSTRPSLA 60
Query: 251 KEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPN 310
+H L + G + FV L+ MY ++ + A+ FD++ +++ G+
Sbjct: 61 TSLHCLILKKGFSNQLFVSSGLISMYSKHDRIKEARFLFDDMPERDDVSWNSMIAGYSQR 120
Query: 311 VYTWNAMQLFSEML----SLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSD 366
A LF M+ + L +T+ +L AC L GK VH YA++ G+DSD
Sbjct: 121 GLNEEACGLFCSMINSCENWKLLVSDFTLATVLKACGGLGCSRIGKCVHGYAVKIGFDSD 180
Query: 367 VHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILA 426
+ + + V MY KCG L A LA+ +I D+V+ N M+T YA + + +E I F ++
Sbjct: 181 LFVSGSTVYMYCKCGILDMAGLAFDQIENKDIVAWNTMITGYAQNCYEEEAIELFYQMEL 240
Query: 427 SGFRPDHISFLSALSA-----------CVHAGSIKTGSEFFDLMA---------YYDV-- 464
GF+P+ +F L A C HA +K G +A +YD+
Sbjct: 241 EGFKPNDTTFCCVLKASTAMSDSAVGRCFHAKVLKLGCSMDVFVATALVDMYSKFYDIED 300
Query: 465 ---------KPSLKHYTCMVDLLSRAGELGEA---YEFIKKIPMAPDSVMWGALLGGC 510
K +L + ++ S G+ EA Y ++ M PDS + L C
Sbjct: 301 VERAFGEMSKRNLVSFNALITGYSLMGKYEEALRVYSQLQSEGMEPDSFTFVGLFSSC 358
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 93/207 (44%), Gaps = 28/207 (13%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG ++DA+KVF +MPE++ VSWNS++T A NG EAL + M+S P V
Sbjct: 493 MYSKCGMVEDAQKVFSVMPEKNVVSWNSMITGYAQNGFCKEALLLFQEMTS-SGILPTAV 551
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRM-QAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
++ ++ + G EE M G+ P+ + ++ R L +E +
Sbjct: 552 TFVGILFACSHAGLVEEGRNFYNLMVHNYGIPPSMEHCTCMVDLLGRAGYL---EEAEAF 608
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIV------GYCEN 173
+ + F P + G +LSA + + + + + + + Y
Sbjct: 609 LLSSSFSKEPGIW----------GSLLSACGVHKNSDVGSRAAQHCLFLEPHYSSSYTAL 658
Query: 174 GNVAEARELF-------DQMEHLGVQR 193
N+ ++EL+ D M+ +GV++
Sbjct: 659 SNIYASKELWSEVSRIRDLMKDMGVEK 685
>gi|413953302|gb|AFW85951.1| hypothetical protein ZEAMMB73_518426 [Zea mays]
Length = 620
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 190/598 (31%), Positives = 310/598 (51%), Gaps = 58/598 (9%)
Query: 5 CGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSA 64
G + DA+K+F PERD VSW ++V+A A G++ +A +R + N+V+W+A
Sbjct: 53 AGRVWDARKLFDGTPERDVVSWTALVSAYARRGMLRDARSLFDR----SDARRNVVTWTA 108
Query: 65 VIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNG 124
++ G+ + G +EA + RM + N + +++L A A + +
Sbjct: 109 LLSGYARAGLVDEAEVLFQRMP----QRNVVSWNTMLEAYAVAGRAGDACALFDRMP--- 161
Query: 125 FMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFD 184
+ + N L+ + R G + A ++F + ++ ++ T++ G +GNV EAR LFD
Sbjct: 162 -VRDAGSWNILLAMLVRSGSVDKARELFGRMPERDVMAWTTMVDGVARSGNVDEARLLFD 220
Query: 185 QMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADM 244
M +R ++SWN+MISGY N DEA +F + RD IA ++
Sbjct: 221 SMP----ERNVVSWNAMISGYTRNHRLDEALDLFTKMPHRD-------------IASCNI 263
Query: 245 NSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKE 304
++ + + +DL A+ FDE+ +
Sbjct: 264 ---------------------------MITGFIQNKDLKRARKLFDEMPERNVVTWTTMM 296
Query: 305 DGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYD 364
+G+ + ++ LF ML + P+ T L ACS LAT+ GKQVH + +
Sbjct: 297 NGYLKGKQSELSLGLFRGMLMSGIRPNQVTFLGALDACSDLATLCEGKQVHQMICKTAFQ 356
Query: 365 SDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRI 424
D +G+AL+++YAKCG + AR + DL+S N ++ AYA HG G E I + ++
Sbjct: 357 VDTFVGSALMNVYAKCGEVGLARKLFDLSREKDLISWNGIIAAYAHHGVGIEAIHLYEKM 416
Query: 425 LASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGE 483
+G+RP+ ++++ LSAC H+G + G + F+ M + +HYTC++DL SRAG
Sbjct: 417 QGNGYRPNDVTYVVLLSACSHSGLVDEGLKIFESMVNDRSIAVRDEHYTCLIDLCSRAGR 476
Query: 484 LGEAYEFIKKIPMAPDS-VMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLAN 542
L +A I + + P S +W ALLGGC +HGN G +AA LI+ EP+N G Y +L+N
Sbjct: 477 LDDAKRLIHYLKIKPASGSVWSALLGGCNAHGNESIGNLAARNLIQAEPDNAGTYTLLSN 536
Query: 543 LFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTII 600
++A AG+W + A R +M +R + K PGCSWIE +++H F A D+SH S+ IY ++
Sbjct: 537 IYASAGKWKEAAEIRSEMNNRGLKKQPGCSWIEVANKVHVFVARDKSHSESDLIYGLL 594
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 122/473 (25%), Positives = 222/473 (46%), Gaps = 54/473 (11%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y + G +D+A+ +F+ MP+R+ VSWN+++ A A G +A +RM D S
Sbjct: 113 YARAGLVDEAEVLFQRMPQRNVVSWNTMLEAYAVAGRAGDACALFDRMPVRDAG-----S 167
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W+ ++ ++G ++A + RM E + ++++ AR + + +
Sbjct: 168 WNILLAMLVRSGSVDKARELFGRMP----ERDVMAWTTMVDGVARSGNVDEARLLFDSMP 223
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
+S N ++ Y R + AL +F+K ++ SCN +I G+ +N ++ AR+
Sbjct: 224 ERNVVS----WNAMISGYTRNHRLDEALDLFTKMPHRDIASCNIMITGFIQNKDLKRARK 279
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
LFD+M +R +++W +M++GY+ + + +FR +LM GI P TF L AC
Sbjct: 280 LFDEMP----ERNVVTWTTMMNGYLKGKQSELSLGLFRGMLM-SGIRPNQVTFLGALDAC 334
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK 301
+D+ +L +GK++H + Q DTFVG AL+ +Y + ++ A+ FD L +
Sbjct: 335 SDLATLCEGKQVHQMICKTAFQVDTFVGSALMNVYAKCGEVGLARKLFD--------LSR 386
Query: 302 MKEDGFEPNVYTWN--------------AMQLFSEMLSLDLTPDIYTVGIILSACSSLAT 347
E ++ +WN A+ L+ +M P+ T ++LSACS
Sbjct: 387 ------EKDLISWNGIIAAYAHHGVGIEAIHLYEKMQGNGYRPNDVTYVVLLSACSHSGL 440
Query: 348 MERGKQVHAYAI--RCGYDSDVHIGTALVDMYAKCGSLKHAR--LAYKRISTPDLVSQNA 403
++ G ++ + R D H T L+D+ ++ G L A+ + Y +I +A
Sbjct: 441 VDEGLKIFESMVNDRSIAVRDEHY-TCLIDLCSRAGRLDDAKRLIHYLKIKPASGSVWSA 499
Query: 404 MLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSAC-VHAGSIKTGSEF 455
+L HG+ G R ++ + PD+ + LS AG K +E
Sbjct: 500 LLGGCNAHGNESIGNLAARNLIQA--EPDNAGTYTLLSNIYASAGKWKEAAEI 550
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 127/289 (43%), Gaps = 51/289 (17%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
M + GS+D A+++F MPERD ++W ++V A +G V EA + M N+V
Sbjct: 174 MLVRSGSVDKARELFGRMPERDVMAWTTMVDGVARSGNVDEARLLFDSMPE-----RNVV 228
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLE---------------PNARTLSSVLPA-- 103
SW+A+I G+T+N +EA+ + +M + AR L +P
Sbjct: 229 SWNAMISGYTRNHRLDEALDLFTKMPHRDIASCNIMITGFIQNKDLKRARKLFDEMPERN 288
Query: 104 ------------CARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDM--LSAL 149
+ +LSLG F G + +G N G +D C D+ L
Sbjct: 289 VVTWTTMMNGYLKGKQSELSLGL-FRGMLM-SGIRPNQVTFLGALDA---CSDLATLCEG 343
Query: 150 KIFSKFSIKNEVSCNTIIVG-----YCENGNVAEARELFDQMEHLGVQRGIISWNSMISG 204
K + K +T + Y + G V AR+LFD L ++ +ISWN +I+
Sbjct: 344 KQVHQMICKTAFQVDTFVGSALMNVYAKCGEVGLARKLFD----LSREKDLISWNGIIAA 399
Query: 205 YVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEI 253
Y + + EA ++ + + +G P T+ +L AC+ + +G +I
Sbjct: 400 YAHHGVGIEAIHLY-EKMQGNGYRPNDVTYVVLLSACSHSGLVDEGLKI 447
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 61/121 (50%), Gaps = 2/121 (1%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KCG + A+K+F + E+D +SWN ++ A A +G+ +EA+ E+M + PN V
Sbjct: 368 VYAKCGEVGLARKLFDLSREKDLISWNGIIAAYAHHGVGIEAIHLYEKMQG-NGYRPNDV 426
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRM-QAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
++ ++ + +G +E + + M + + ++ C+R +L K Y
Sbjct: 427 TYVVLLSACSHSGLVDEGLKIFESMVNDRSIAVRDEHYTCLIDLCSRAGRLDDAKRLIHY 486
Query: 120 I 120
+
Sbjct: 487 L 487
>gi|115466812|ref|NP_001057005.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|55773756|dbj|BAD72439.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595045|dbj|BAF18919.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|125596288|gb|EAZ36068.1| hypothetical protein OsJ_20378 [Oryza sativa Japonica Group]
Length = 787
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 177/549 (32%), Positives = 296/549 (53%), Gaps = 43/549 (7%)
Query: 56 TPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEG-LEPNARTLSSVLPACARLQKLSLGK 114
+P+ V W+ ++ G + + EA+ RM +G + P+A TL+SVLPA A + +++G+
Sbjct: 177 SPDTVLWNTLLAGLSGS----EAVESFARMVCDGSVRPDATTLASVLPAAAEVADVTMGR 232
Query: 115 EFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
H + + G + V+ GL+ +Y +CGD
Sbjct: 233 CVHSFAEKCGLAEHEHVLTGLISLYSKCGD------------------------------ 262
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTF 234
V AR LFD ME + ++++N++ISGY N + + ++F +L M G+ P S T
Sbjct: 263 -VESARCLFDMME----KPDLVAYNALISGYSVNGMVGSSVNLFTEL-MTLGLWPNSSTL 316
Query: 235 GSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIEN 294
+++ + + +H + G +++ V A+ ++CR D+ +A+ AFD +
Sbjct: 317 VALIPVHSPFGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPE 376
Query: 295 IENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV 354
G+ N T A+ LF +M+ L++ P+ T+ LSAC+ L + GK +
Sbjct: 377 KTMESWNAMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWL 436
Query: 355 HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHG 414
H + +V++ TAL+DMYAKCGS+ AR + + ++VS NAM+ Y +HG G
Sbjct: 437 HRIITEEDLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQG 496
Query: 415 KEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTC 473
E + ++ +L + P +FLS L AC H G ++ G + F M Y + P ++H TC
Sbjct: 497 AEALKLYKDMLDAHLLPTSATFLSVLYACSHGGLVEEGWKVFRSMTDDYAINPGIEHCTC 556
Query: 474 MVDLLSRAGELGEAYEFIKKIPM-APDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPN 532
MVDLL RAG+L EA+E I + P A +WGALLG C+ H + + ++A+ +L EL+P
Sbjct: 557 MVDLLGRAGQLKEAFELISEFPKSAVGPGVWGALLGACMVHKDSDLAKLASQKLFELDPE 616
Query: 533 NTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDR 592
N+G YV+L+NL ++S+ A RQ+ K R++ K+PG + IE ++ H F A DR+H +
Sbjct: 617 NSGYYVLLSNLHTSKKQYSEAAVVRQEAKSRKLVKTPGYTLIEIGNKPHVFMAGDRAHPQ 676
Query: 593 SEEIYTIID 601
SE IY+ ++
Sbjct: 677 SEAIYSYLE 685
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 166/340 (48%), Gaps = 9/340 (2%)
Query: 176 VAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFG 235
V AR++FD + + WN++++G + EA F ++ + P + T
Sbjct: 165 VDHARKVFDTVP----SPDTVLWNTLLAGLSGS----EAVESFARMVCDGSVRPDATTLA 216
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
SVL A A++ + G+ +H+ A GL V L+ +Y + D+ +A+ FD +E
Sbjct: 217 SVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDVESARCLFDMMEKP 276
Query: 296 ENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVH 355
+ + G+ N +++ LF+E+++L L P+ T+ ++ S + +H
Sbjct: 277 DLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPVHSPFGHDLLAQCLH 336
Query: 356 AYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGK 415
+ ++ G+ ++ + TA+ ++ + ++ AR A+ + + S NAM++ YA +G +
Sbjct: 337 GFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESWNAMISGYAQNGLTE 396
Query: 416 EGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMV 475
+A F +++ RP+ I+ S LSAC G++ G ++ D++P++ T ++
Sbjct: 397 MAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRIITEEDLEPNVYVMTALI 456
Query: 476 DLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
D+ ++ G + EA + + V W A++ G HG
Sbjct: 457 DMYAKCGSISEARRIFNTMDNK-NVVSWNAMIAGYGLHGQ 495
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 103/405 (25%), Positives = 163/405 (40%), Gaps = 109/405 (26%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KCG ++ A+ +F MM E P+LV
Sbjct: 256 LYSKCGDVESARCLFDMM------------------------------------EKPDLV 279
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+++A+I G++ NG ++ + + GL PN+ TL +++P + L + HG++
Sbjct: 280 AYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPVHSPFGHDLLAQCLHGFV 339
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
++GF +N V + ++ R DM SA K F K S N +I GY +NG A
Sbjct: 340 LKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESWNAMISGYAQNGLTEMAV 399
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LF+QM L V+ P T S L A
Sbjct: 400 ALFEQMVKLNVR------------------------------------PNPITISSTLSA 423
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA + +L GK +H + L+ + +V AL++MY + + A+ F+ ++N
Sbjct: 424 CAQLGALSLGKWLHRIITEEDLEPNVYVMTALIDMYAKCGSISEARRIFNTMDN------ 477
Query: 301 KMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSSLA 346
NV +WNAM +L+ +ML L P T +L ACS
Sbjct: 478 --------KNVVSWNAMIAGYGLHGQGAEALKLYKDMLDAHLLPTSATFLSVLYACSHGG 529
Query: 347 TMERGKQVHA-----YAIRCGYDSDVHIGTALVDMYAKCGSLKHA 386
+E G +V YAI G + T +VD+ + G LK A
Sbjct: 530 LVEEGWKVFRSMTDDYAINPGIEH----CTCMVDLLGRAGQLKEA 570
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 165/352 (46%), Gaps = 46/352 (13%)
Query: 253 IHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVY 312
+HALA+A G +DTFV AL ++Y + A+ FD + + + +L G +
Sbjct: 136 LHALAVAAGYAADTFVASALAKLYFVLSRVDHARKVFDTVPSPDTVLWNTLLAGLSGS-- 193
Query: 313 TWNAMQLFSEML-SLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGT 371
A++ F+ M+ + PD T+ +L A + +A + G+ VH++A +CG H+ T
Sbjct: 194 --EAVESFARMVCDGSVRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLT 251
Query: 372 ALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRP 431
L+ +Y+KCG ++ AR + + PDLV+ NA+++ Y+++G + F ++ G P
Sbjct: 252 GLISLYSKCGDVESARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWP 311
Query: 432 DHISFLS-----------ALSACVHAGSIKTG------------------SEFFDLMAYY 462
+ + ++ L+ C+H +K+G ++ +
Sbjct: 312 NSSTLVALIPVHSPFGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAF 371
Query: 463 DVKP--SLKHYTCMVDLLSRAG--ELGEA-YEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
D P +++ + M+ ++ G E+ A +E + K+ + P+ + + L C G L
Sbjct: 372 DTMPEKTMESWNAMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALS 431
Query: 518 FGQIAADRLIE--LEPNNTGNYVMLA--NLFAYAGRWSDLARTRQKMKDRRM 565
G+ + E LEPN YVM A +++A G S+ R M ++ +
Sbjct: 432 LGKWLHRIITEEDLEPN---VYVMTALIDMYAKCGSISEARRIFNTMDNKNV 480
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 69/167 (41%), Gaps = 59/167 (35%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGS+ +A+++F M DN+ N+V
Sbjct: 458 MYAKCGSISEARRIFNTM----------------------------------DNK--NVV 481
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A+I G+ +G EA+ + M L P + T SVL AC+ HG +
Sbjct: 482 SWNAMIAGYGLHGQGAEALKLYKDMLDAHLLPTSATFLSVLYACS-----------HGGL 530
Query: 121 TRNGF-----MSNPFVVNG-------LVDVYRRCGDMLSALKIFSKF 155
G+ M++ + +N +VD+ R G + A ++ S+F
Sbjct: 531 VEEGWKVFRSMTDDYAINPGIEHCTCMVDLLGRAGQLKEAFELISEF 577
>gi|414589059|tpg|DAA39630.1| TPA: hypothetical protein ZEAMMB73_362613 [Zea mays]
Length = 692
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 180/546 (32%), Positives = 293/546 (53%), Gaps = 10/546 (1%)
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRM-QAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
++ +I +G A+ M + + P+A T VL ACA L+LG+ H
Sbjct: 126 YNVLISNCLNHGLPHHALAAYHEMIDKDAVPPDAFTYPKVLRACAETGNLALGRAVHVRA 185
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
G + F N LV +Y +C D+ +A +F ++ VS N++I GY +G +A
Sbjct: 186 VDAGMDGHLFFQNALVSMYAKCWDLAAARTVFDGMEHRDVVSWNSMISGYAASGQWRKAV 245
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI- 239
ELF +M+ G + ++WN++ GY+ Y A + RD++ R G S F +++I
Sbjct: 246 ELFLRMQAEGAEMNSVTWNTIAGGYIQMHDYRAAVGLIRDMV-RGG---ASIDFVTLVIG 301
Query: 240 --ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
AC+ LR GKEIH LA+ + V A++ MY R D+ A M F I
Sbjct: 302 SNACSRAGWLRLGKEIHGLAVRMQCHEIDSVINAVITMYARCNDMERALMLFKMIRCPGL 361
Query: 298 LLGKMKEDGFEPNVYTWNAMQLFSEMLSL-DLTPDIYTVGIILSACSSLATMERGKQVHA 356
+ GF A +LF EM+ D+ P+ TV L+ C+ +A ++ G+++H
Sbjct: 362 VAWNTTIAGFALLDDAEAASRLFREMVVCGDVQPNYVTVVTYLALCARVANLQHGRELHT 421
Query: 357 YAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKE 416
+ ++ G+ + +L+DMY+K G L A+ + + PD++S +M+ Y M G G
Sbjct: 422 HIVKQGFKGYRLLWNSLIDMYSKSGRLSVAQNVFDTMDDPDMISFTSMIAGYGMQGKGII 481
Query: 417 GIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMV 475
+ F++++ SG PD I ++ LSAC H+G + G E FD M Y +KP ++HY+CMV
Sbjct: 482 SLRFFKQMIDSGIMPDAIIMVTVLSACSHSGLVGEGEELFDKMVKSYGIKPQMEHYSCMV 541
Query: 476 DLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTG 535
DL +RAG L +A E + + P P S M AL+G C GN+ G+ +A RL+E++ N G
Sbjct: 542 DLYARAGLLEKAEELLNQTPFPPTSTMVAALVGACHEQGNIIIGERSARRLLEMKTENAG 601
Query: 536 NYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEE 595
++V++AN++A AG W++LA R+ M+D + K+PG +W + + F DRS+ + E
Sbjct: 602 HFVLIANMYAAAGCWNELATVRKLMRDLGVMKAPGLAWADLGNGFTPFLVGDRSNPLAPE 661
Query: 596 IYTIID 601
IY ++D
Sbjct: 662 IYEVLD 667
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 111/416 (26%), Positives = 183/416 (43%), Gaps = 38/416 (9%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC L A+ VF M RD VSWNS+++ AA+G +A+E RM + E N V
Sbjct: 203 MYAKCWDLAAARTVFDGMEHRDVVSWNSMISGYAASGQWRKAVELFLRMQAEGAEM-NSV 261
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+ + GG+ Q A+G++ M G + TL AC+R L LGKE HG
Sbjct: 262 TWNTIAGGYIQMHDYRAAVGLIRDMVRGGASIDFVTLVIGSNACSRAGWLRLGKEIHGLA 321
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R V+N ++ +Y RC DM AL +F V+ NT I G+
Sbjct: 322 VRMQCHEIDSVINAVITMYARCNDMERALMLFKMIRCPGLVAWNTTIAGFA--------- 372
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
L D E A +FR++++ ++P T + L
Sbjct: 373 -LLDDAE-------------------------AASRLFREMVVCGDVQPNYVTVVTYLAL 406
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA + +L+ G+E+H + G + + +L++MY + L AQ FD +++ + +
Sbjct: 407 CARVANLQHGRELHTHIVKQGFKGYRLLWNSLIDMYSKSGRLSVAQNVFDTMDDPDMISF 466
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G+ +++ F +M+ + PD + +LSACS + G+++ ++
Sbjct: 467 TSMIAGYGMQGKGIISLRFFKQMIDSGIMPDAIIMVTVLSACSHSGLVGEGEELFDKMVK 526
Query: 361 C-GYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGK 415
G + + +VD+YA+ G L+ A + P + A L A H G
Sbjct: 527 SYGIKPQMEHYSCMVDLYARAGLLEKAEELLNQTPFPPTSTMVAALVG-ACHEQGN 581
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 143/369 (38%), Gaps = 76/369 (20%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +C ++ A +FKM+ V+WN+ + A LD
Sbjct: 339 MYARCNDMERALMLFKMIRCPGLVAWNTTIAGFAL----------------LD------- 375
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFR-MQAEG-LEPNARTLSSVLPACARLQKLSLGKEFHG 118
D EA LFR M G ++PN T+ + L CAR+ L G+E H
Sbjct: 376 --------------DAEAASRLFREMVVCGDVQPNYVTVVTYLALCARVANLQHGRELHT 421
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
+I + GF + N L+D+Y + G + A +F + +S ++I GY G
Sbjct: 422 HIVKQGFKGYRLLWNSLIDMYSKSGRLSVAQNVFDTMDDPDMISFTSMIAGYGMQGKGII 481
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
+ F QM G+ I +++S + L E +F ++ GI+P + ++
Sbjct: 482 SLRFFKQMIDSGIMPDAIIMVTVLSACSHSGLVGEGEELFDKMVKSYGIKPQMEHYSCMV 541
Query: 239 IACADMNSLRKGKE-------------IHALAIALGLQSDTFVGG----ALVEM------ 275
A L K +E + AL A Q + +G L+EM
Sbjct: 542 DLYARAGLLEKAEELLNQTPFPPTSTMVAALVGACHEQGNIIIGERSARRLLEMKTENAG 601
Query: 276 -YCRYQDLVAAQMAFDEIENIENL---LGKMKEDGFEPNVYTWNAM-QLFSEMLSLD--- 327
+ ++ AA ++E+ + L LG MK G W + F+ L D
Sbjct: 602 HFVLIANMYAAAGCWNELATVRKLMRDLGVMKAPGL-----AWADLGNGFTPFLVGDRSN 656
Query: 328 -LTPDIYTV 335
L P+IY V
Sbjct: 657 PLAPEIYEV 665
>gi|224127716|ref|XP_002320145.1| predicted protein [Populus trichocarpa]
gi|222860918|gb|EEE98460.1| predicted protein [Populus trichocarpa]
Length = 548
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 198/597 (33%), Positives = 295/597 (49%), Gaps = 97/597 (16%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KC + A ++F M R+ V+WN+V+ GLV +C R S +
Sbjct: 32 VYIKCKDFNYAHRLFDEMHVRNVVTWNTVIC-----GLV----DC--RGSDYE------- 73
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
S+V GF +M + + +A TL+ +L AC L + +G+E H +I
Sbjct: 74 --SSVYMGFCY----------FRKMLLDKVGFDAITLNGLLRACLELNDVEIGRELHCFI 121
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ GF N FV + LVD+Y +CG V EAR
Sbjct: 122 VKLGFAVNSFVNSALVDLYGKCG-------------------------------LVKEAR 150
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
FD++ R ++ WN M+S Y N L +EA F+ L+ + FTF S+L +
Sbjct: 151 RAFDEV----YCRDLVLWNVMLSCYAMNCLAEEASGFFK-LMQEENFMTDGFTFSSMLNS 205
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C + S G++IH L+I L D V LV+MY + +++ A+ AFD +
Sbjct: 206 CGTLGSCNLGRQIHGLSIKLSFDLDVLVASGLVDMYAKSENIDDARKAFDGMA------- 258
Query: 301 KMKEDGFEPNVYTWN--------------AMQLFSEMLSLDLTPDIYTVGIILSACSSLA 346
NV +WN AM+L M DL PD T+ I+ +CSS
Sbjct: 259 -------ARNVVSWNTMVVGYGRLGDGGEAMKLLIGMFQEDLRPDEITLASIIRSCSSAL 311
Query: 347 TMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLT 406
T QV+AY ++ G+ + + I AL++ Y+K GS+ A + + PDLV+ +++
Sbjct: 312 TSCEIMQVNAYVLKNGFHAFLSIANALINAYSKGGSIAMALQCFNTVLEPDLVTWTSLIG 371
Query: 407 AYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKP 466
AYA H K I F +LA G PD I FL LSAC HAG + G +F LM Y + P
Sbjct: 372 AYAFHSLPKNSIDTFEEMLADGVWPDQIVFLEVLSACSHAGLVNEGLHYFSLMKDYHILP 431
Query: 467 SLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRL 526
L+HYTC++DLL RAG L EA+ + + + S GA +G C HG+++ + AA++L
Sbjct: 432 GLEHYTCLIDLLGRAGLLDEAFNILNSMSIGYSSDTLGAFIGACKIHGDVKLAKWAAEKL 491
Query: 527 IELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIE---DRDEI 580
E+EPN NY +++++FA G W D+AR + M+DR H PGCSW+E DRD +
Sbjct: 492 FEMEPNKPVNYTLMSSVFASEGHWHDVARIHKLMRDRCGHGVPGCSWMEYAGDRDPV 548
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 140/293 (47%), Gaps = 16/293 (5%)
Query: 244 MNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL----- 298
M LR+GK++H+ I LG + + ++ +Y + +D A FDE+ ++ N+
Sbjct: 1 MGFLREGKQVHSHVIKLGFCNVLSLQNQILNVYIKCKDFNYAHRLFDEM-HVRNVVTWNT 59
Query: 299 ----LGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV 354
L + +E +VY F +ML + D T+ +L AC L +E G+++
Sbjct: 60 VICGLVDCRGSDYESSVYM--GFCYFRKMLLDKVGFDAITLNGLLRACLELNDVEIGREL 117
Query: 355 HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHG 414
H + ++ G+ + + +ALVD+Y KCG +K AR A+ + DLV N ML+ YAM+
Sbjct: 118 HCFIVKLGFAVNSFVNSALVDLYGKCGLVKEARRAFDEVYCRDLVLWNVMLSCYAMNCLA 177
Query: 415 KEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCM 474
+E F+ + F D +F S L++C GS G + L + + +
Sbjct: 178 EEASGFFKLMQEENFMTDGFTFSSMLNSCGTLGSCNLGRQIHGLSIKLSFDLDVLVASGL 237
Query: 475 VDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLI 527
VD+ +++ + +A + + A + V W ++ V +G L G A LI
Sbjct: 238 VDMYAKSENIDDARKAFDGMA-ARNVVSWNTMV---VGYGRLGDGGEAMKLLI 286
>gi|15241714|ref|NP_198751.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171567|sp|Q9FLZ9.1|PP405_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g39350
gi|10177683|dbj|BAB11009.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332007040|gb|AED94423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 677
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 174/525 (33%), Positives = 272/525 (51%), Gaps = 41/525 (7%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
+++SW+ +I G+ +NGY +A+ M M E ++ + T+ S+LP C L+ L +G+ H
Sbjct: 182 DVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVH 241
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
+ V N LV++Y +CG M
Sbjct: 242 KLVEEKRLGDKIEVKNALVNMYLKCGRM-------------------------------D 270
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
EAR +FD+ME +R +I+W MI+GY ++ + A + R L+ +G+ P + T S+
Sbjct: 271 EARFVFDRME----RRDVITWTCMINGYTEDGDVENALELCR-LMQFEGVRPNAVTIASL 325
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
+ C D + GK +H A+ + SD + +L+ MY + + + F
Sbjct: 326 VSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHT 385
Query: 298 LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAY 357
G N +A+ LF M D+ P+I T+ +L A ++LA + + +H Y
Sbjct: 386 GPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCY 445
Query: 358 AIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS----TPDLVSQNAMLTAYAMHGH 413
+ G+ S + T LV +Y+KCG+L+ A + I + D+V A+++ Y MHG
Sbjct: 446 LTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGD 505
Query: 414 GKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYT 472
G + F ++ SG P+ I+F SAL+AC H+G ++ G F M +Y HYT
Sbjct: 506 GHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYT 565
Query: 473 CMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPN 532
C+VDLL RAG L EAY I IP P S +WGALL CV+H N++ G++AA++L ELEP
Sbjct: 566 CIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFELEPE 625
Query: 533 NTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDR 577
NTGNYV+LAN++A GRW D+ + R M++ + K PG S IE R
Sbjct: 626 NTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIEIR 670
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 98/404 (24%), Positives = 180/404 (44%), Gaps = 23/404 (5%)
Query: 164 NTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLM 223
+T+ V Y G++ AR+LF++M Q ++S+N +I YV LY +A S+F ++
Sbjct: 53 STLSVTYALCGHITYARKLFEEMP----QSSLLSYNIVIRMYVREGLYHDAISVFIRMV- 107
Query: 224 RDGIE--PTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQD 281
+G++ P +T+ V A ++ S++ G +H + D +V AL+ MY +
Sbjct: 108 SEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGK 167
Query: 282 LVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSA 341
+ A+ FD ++N + + G+ N Y +A+ +F M++ + D T+ +L
Sbjct: 168 VEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPV 227
Query: 342 CSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQ 401
C L +E G+ VH + + ALV+MY KCG + AR + R+ D+++
Sbjct: 228 CGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITW 287
Query: 402 NAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY 461
M+ Y G + + R + G RP+ ++ S +S C A + G
Sbjct: 288 TCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVR 347
Query: 462 YDVKPSLKHYTCMVDLLSRAGELGEAYEFI---KKIPMAPDSVMWGALLGGCVSHGNLE- 517
V + T ++ + ++ + + K P W A++ GCV + +
Sbjct: 348 QQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGP----WSAIIAGCVQNELVSD 403
Query: 518 -FGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKM 560
G R ++EPN +A L + ++ LA RQ M
Sbjct: 404 ALGLFKRMRREDVEPN-------IATLNSLLPAYAALADLRQAM 440
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 103/421 (24%), Positives = 164/421 (38%), Gaps = 86/421 (20%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG +D+A+ VF M RD ++W ++ +G V ALE L R+
Sbjct: 262 MYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALE-LCRL----------- 309
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
MQ EG+ PNA T++S++ C K++ GK HG+
Sbjct: 310 ------------------------MQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWA 345
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R S+ + L+ +Y +C + ++FS S + + II G +N V++A
Sbjct: 346 VRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDAL 405
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LF +M V+ I + NS++ Y
Sbjct: 406 GLFKRMRREDVEPNIATLNSLLPAY----------------------------------- 430
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN--- 297
A + LR+ IH G S LV +Y + L +A F+ I+
Sbjct: 431 -AALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKD 489
Query: 298 -LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHA 356
+L G+ + NA+Q+F EM+ +TP+ T L+ACS +E G +
Sbjct: 490 VVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFR 549
Query: 357 YAIRCGYDSDVHIG--TALVDMYAKCGSLKHARLAYKRIST----PDLVSQNAMLTAYAM 410
+ + Y + T +VD+ + G L AY I+T P A+L A
Sbjct: 550 FMLE-HYKTLARSNHYTCIVDLLGRAGRLDE---AYNLITTIPFEPTSTVWGALLAACVT 605
Query: 411 H 411
H
Sbjct: 606 H 606
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 121/287 (42%), Gaps = 72/287 (25%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC +D +VF + W++++ C N LV +AL +RM
Sbjct: 363 MYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRM----------- 411
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+ E +EPN TL+S+LPA A L L H Y+
Sbjct: 412 -------------------------RREDVEPNIATLNSLLPAYAALADLRQAMNIHCYL 446
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFS----KFSIKNEVSCNTIIVGYCENGNV 176
T+ GFMS+ GLV VY +CG + SA KIF+ K K+ V +I GY +G+
Sbjct: 447 TKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDG 506
Query: 177 AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFR----------------- 219
A ++F +M GV I++ S ++ + L +E ++FR
Sbjct: 507 HNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTC 566
Query: 220 --DLLMRDG-------------IEPTSFTFGSVLIACADMNSLRKGK 251
DLL R G EPTS +G++L AC +++ G+
Sbjct: 567 IVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGE 613
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 57/117 (48%), Gaps = 3/117 (2%)
Query: 338 ILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPD 397
+L+ ++ ++ + K +H + I G S HI + L YA CG + +AR ++ +
Sbjct: 21 LLNHFAATQSISKTKALHCHVITGGRVSG-HILSTLSVTYALCGHITYARKLFEEMPQSS 79
Query: 398 LVSQNAMLTAYAMHGHGKEGIAHFRRILASGFR--PDHISFLSALSACVHAGSIKTG 452
L+S N ++ Y G + I+ F R+++ G + PD ++ A S+K G
Sbjct: 80 LLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLG 136
>gi|414881621|tpg|DAA58752.1| TPA: hypothetical protein ZEAMMB73_723286 [Zea mays]
Length = 1058
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 184/602 (30%), Positives = 303/602 (50%), Gaps = 77/602 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG+++ A K+F++M E + +
Sbjct: 424 MYAKCGAIESASKIFQLM------------------------------------EATDRI 447
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ +I QNG EEA+ M+ + P+ L S L +CA L+ L+ G++ H
Sbjct: 448 SWNTIISALDQNGNCEEAVMHYSLMRQSCISPSNFALISSLSSCAGLKLLTAGQQVHCDA 507
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTII-VGYCENGNVAEA 179
+ G + V N LV +Y CG M K+F+ + +EVS NT++ V ++E
Sbjct: 508 VKWGLDLDTSVSNVLVKMYGECGAMSDYWKVFNSMAEHDEVSWNTMMGVMASSQTPISEI 567
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
++F+ M MR G+ P TF ++L
Sbjct: 568 VKVFNNM------------------------------------MRGGLIPNKVTFINLLA 591
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
A + ++ L GK++HA + G+ D V AL+ Y + D+ + + F + + + +
Sbjct: 592 ALSPLSVLELGKQVHAAVMKHGVMEDNVVDNALISCYAKSGDMGSCEHLFTNMSDRRDAI 651
Query: 300 G-KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYA 358
G+ N AM M+ D T IIL+AC+S+A +ERG ++HA+
Sbjct: 652 SWNSMISGYIYNGNLQEAMDCVWLMIHSGQIMDCCTFSIILNACASVAALERGMELHAFG 711
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGI 418
IR +SDV + +ALVDMY+KCG + +A + ++ + S N+M++ YA HG G++ I
Sbjct: 712 IRSHLESDVVVESALVDMYSKCGRVDYASKLFNSMTQRNEFSWNSMISGYARHGLGRKAI 771
Query: 419 AHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLL 478
F +L S PDH++F+S LSAC HAG ++ G E+F++M + + P ++HY+C++DLL
Sbjct: 772 EIFEEMLRSRESPDHVTFVSVLSACSHAGLVERGLEYFEMMPDHGILPQIEHYSCVIDLL 831
Query: 479 SRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSH---GNLEFGQIAADRLIELEPNNTG 535
RAG++ + E+I+++P+ P++++W +L C N++ G+ A+ L+E+EP N
Sbjct: 832 GRAGKIDKIKEYIQRMPIEPNALIWRTVLVACRQSKDGSNIDLGREASRVLLEIEPQNPV 891
Query: 536 NYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEE 595
NYV+ +N A G W D A+ R M+ K G SW+ D +H F A DRSH ++E
Sbjct: 892 NYVLASNFHAATGMWEDTAKARTAMRQATEKKEAGRSWVTLNDGVHTFIAGDRSHPNTKE 951
Query: 596 IY 597
IY
Sbjct: 952 IY 953
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 128/500 (25%), Positives = 221/500 (44%), Gaps = 60/500 (12%)
Query: 27 NSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQ 86
+++V+A A +GL EA + L + N V+ + +I G + + EEA+ +F
Sbjct: 314 SALVSAFARHGLTDEAKDIF-----LSLKQKNAVTLNGLIVGLVRQDFSEEAVK-IFVGT 367
Query: 87 AEGLEPNARTLSSVLPACARL----QKLSLGKEFHGYITRNGFMSNPFVV-NGLVDVYRR 141
++ NA T +L A A + L +G+ HG++ R G V NGLV++Y +
Sbjct: 368 RNTVDVNADTYVVLLSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAK 427
Query: 142 CGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSM 201
CG + SA KIF + +S NTII +NGN EA
Sbjct: 428 CGAIESASKIFQLMEATDRISWNTIISALDQNGNCEEA---------------------- 465
Query: 202 ISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALG 261
M L+ + I P++F S L +CA + L G+++H A+ G
Sbjct: 466 --------------VMHYSLMRQSCISPSNFALISSLSSCAGLKLLTAGQQVHCDAVKWG 511
Query: 262 LQSDTFVGGALVEMY------CRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWN 315
L DT V LV+MY Y + + DE+ + ++G M +
Sbjct: 512 LDLDTSVSNVLVKMYGECGAMSDYWKVFNSMAEHDEV-SWNTMMGVMASSQTPIS----E 566
Query: 316 AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVD 375
+++F+ M+ L P+ T +L+A S L+ +E GKQVHA ++ G D + AL+
Sbjct: 567 IVKVFNNMMRGGLIPNKVTFINLLAALSPLSVLELGKQVHAAVMKHGVMEDNVVDNALIS 626
Query: 376 MYAKCGSLKHARLAYKRIS-TPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHI 434
YAK G + + +S D +S N+M++ Y +G+ +E + ++ SG D
Sbjct: 627 CYAKSGDMGSCEHLFTNMSDRRDAISWNSMISGYIYNGNLQEAMDCVWLMIHSGQIMDCC 686
Query: 435 SFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKI 494
+F L+AC +++ G E ++ + + +VD+ S+ G + A + +
Sbjct: 687 TFSIILNACASVAALERGMELHAFGIRSHLESDVVVESALVDMYSKCGRVDYASKLFNSM 746
Query: 495 PMAPDSVMWGALLGGCVSHG 514
+ W +++ G HG
Sbjct: 747 TQR-NEFSWNSMISGYARHG 765
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 125/595 (21%), Positives = 228/595 (38%), Gaps = 112/595 (18%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y K L A +VF MPER+ VSW +V+ +G+ EA
Sbjct: 106 YAKGARLAAASQVFDEMPERNAVSWTCLVSGYVLHGIAEEAFRVFR-------------- 151
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPAC--ARLQKLSLGKEFHGY 119
ML +QA G P + T ++L AC +L + HG
Sbjct: 152 ------------------AMLREVQA-GCRPTSFTFGTLLRACQDGGPDRLGFAVQVHGL 192
Query: 120 ITRNGFMSNPFVVNGLVDVYRRC--GDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
+++ + SN V N L+ +Y C G + A ++F I++ ++ N ++ Y + G+VA
Sbjct: 193 VSKTEYASNTTVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVA 252
Query: 178 EARELFDQM------------EH---------------LGVQRGIISW------------ 198
LF M EH V ++ W
Sbjct: 253 STFTLFKDMQRGDSRIQLRPTEHTFGSLITAASLSSGSSAVLDQVLVWVLKSGCSSDLYV 312
Query: 199 -NSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV-------------------- 237
++++S + + L DEA +F L ++ + G V
Sbjct: 313 GSALVSAFARHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQDFSEEAVKIFVGTRNTVD 372
Query: 238 ---------LIACADMN----SLRKGKEIHALAIALGLQS-DTFVGGALVEMYCRYQDLV 283
L A A+ + LR G+ +H + GL V LV MY + +
Sbjct: 373 VNADTYVVLLSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIE 432
Query: 284 AAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACS 343
+A F +E + + + N A+ +S M ++P + + LS+C+
Sbjct: 433 SASKIFQLMEATDRISWNTIISALDQNGNCEEAVMHYSLMRQSCISPSNFALISSLSSCA 492
Query: 344 SLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNA 403
L + G+QVH A++ G D D + LV MY +CG++ + ++ D VS N
Sbjct: 493 GLKLLTAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDYWKVFNSMAEHDEVSWNT 552
Query: 404 MLTAYAMHGHG-KEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYY 462
M+ A E + F ++ G P+ ++F++ L+A ++ G + + +
Sbjct: 553 MMGVMASSQTPISEIVKVFNNMMRGGLIPNKVTFINLLAALSPLSVLELGKQVHAAVMKH 612
Query: 463 DVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
V ++ +++G++G + D++ W +++ G + +GNL+
Sbjct: 613 GVMEDNVVDNALISCYAKSGDMGSCEHLFTNMSDRRDAISWNSMISGYIYNGNLQ 667
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 116/458 (25%), Positives = 204/458 (44%), Gaps = 75/458 (16%)
Query: 135 LVDVYRRCGDMLSALKIFSKFSIKNEVS-----CNTIIVGYCENGNVAEARELFDQMEHL 189
L+ + RR GD S + + IK ++ CN ++ Y + +A A ++FD+M
Sbjct: 67 LLPLLRRGGDANSPENLHVEL-IKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMP-- 123
Query: 190 GVQRGIISWNSMISGYVDNSLYDEAFSMFRDLL--MRDGIEPTSFTFGSVLIACADMNSL 247
+R +SW ++SGYV + + +EAF +FR +L ++ G PTSFTFG++L AC D
Sbjct: 124 --ERNAVSWTCLVSGYVLHGIAEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGGPD 181
Query: 248 RKG--KEIHALAIALGLQSDTFVGGALVEMY--CRYQDLVAAQMAFDEIENIENLLGKMK 303
R G ++H L S+T V AL+ MY C + AQ FD I +L+
Sbjct: 182 RLGFAVQVHGLVSKTEYASNTTVCNALISMYGSCTVGPPILAQRVFDGTP-IRDLI---- 236
Query: 304 EDGFEPNVYTWNAM--------------QLFSEMLSLD----LTPDIYTVG-IILSACSS 344
TWNA+ LF +M D L P +T G +I +A S
Sbjct: 237 ---------TWNALMSVYAKKGDVASTFTLFKDMQRGDSRIQLRPTEHTFGSLITAASLS 287
Query: 345 LATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAM 404
+ QV + ++ G SD+++G+ALV +A+ G A+ + + + V+ N +
Sbjct: 288 SGSSAVLDQVLVWVLKSGCSSDLYVGSALVSAFARHGLTDEAKDIFLSLKQKNAVTLNGL 347
Query: 405 LTAYAMHGHGKEGIAHF--RRILASGFRPDHISFLSALSA------------CVHAGSIK 450
+ +E + F R ++ LSAL+ VH ++
Sbjct: 348 IVGLVRQDFSEEAVKIFVGTRNTVDVNADTYVVLLSALAEYSISEEGLRIGRVVHGHMLR 407
Query: 451 TGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGC 510
TG D+K ++ + +V++ ++ G + E+ I ++ A D + W ++
Sbjct: 408 TG--------LTDLKIAVSN--GLVNMYAKCGAI-ESASKIFQLMEATDRISWNTIISAL 456
Query: 511 VSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAG 548
+GN E + L+ + N+ ++++L + AG
Sbjct: 457 DQNGNCEEA-VMHYSLMRQSCISPSNFALISSLSSCAG 493
>gi|224113417|ref|XP_002316490.1| predicted protein [Populus trichocarpa]
gi|222865530|gb|EEF02661.1| predicted protein [Populus trichocarpa]
Length = 492
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 165/502 (32%), Positives = 271/502 (53%), Gaps = 37/502 (7%)
Query: 97 LSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFS 156
L S+L CA+ ++ GK HG + R G ++ N L+++Y +CG + A K+F +
Sbjct: 1 LHSLLQFCAKNREPITGKACHGQVIRLGLETDTLTSNMLMNMYSKCGLIRRACKVFDEIP 60
Query: 157 IKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFS 216
+R ++SWN MI V N ++A
Sbjct: 61 -----------------------------------ERSMVSWNIMIGTCVQNGEEEKAID 85
Query: 217 MFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMY 276
+F ++ R+G + FT SV+ ACA + +++HA AI + +D FVG AL+++Y
Sbjct: 86 IFLEM-QREGSPCSEFTVSSVVCACAAKGDVFFCRQLHAFAIKAVVDADVFVGTALIDVY 144
Query: 277 CRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVG 336
+ + A F+ + ++ GF N + LF+ + L + + +
Sbjct: 145 AKCGSIEDASCVFEGMPERNDVTWSSIVAGFVQNELYEEGLVLFARGKEMGLENNQFMIS 204
Query: 337 IILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTP 396
++ AC+ LA + G+QVHA R G+ + + +ALVDMYAKCGS++ A + + I
Sbjct: 205 SVIRACAGLAALIEGRQVHAIVCRTGFGPNNFVASALVDMYAKCGSIEEAYVLFCNIEKK 264
Query: 397 DLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFF 456
++V NA+++ +A H E + F + +G +PD +++++ LSACVH G + G +F
Sbjct: 265 NVVLWNAIISGFAKHACSSEVMNLFEEMQQTGMQPDEVTYVAVLSACVHVGLVDKGRSYF 324
Query: 457 DLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
DLM ++V P++ HY+CMVD+L R G + EA+E + K+P A + MWG+LL C HGN
Sbjct: 325 DLMTREHNVSPNVLHYSCMVDILGRGGLVHEAHELMTKMPFAATASMWGSLLASCRIHGN 384
Query: 516 LEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIE 575
LE +IAA L E+EP+ GNYV+LAN +A + +W + A+ R+ +K + K G SWIE
Sbjct: 385 LELAEIAAKNLFEMEPDRGGNYVLLANTYAASKKWEEAAKARKSLKGSEILKERGKSWIE 444
Query: 576 DRDEIHKFRASDRSHDRSEEIY 597
+D++H F A +R+H R +IY
Sbjct: 445 IKDKVHTFMAGERTHPRITDIY 466
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 153/353 (43%), Gaps = 74/353 (20%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG + A KVF +PER ++V
Sbjct: 42 MYSKCGLIRRACKVFDEIPER------------------------------------SMV 65
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ +IG QNG +E+AI + MQ EG + T+SSV+ ACA + ++ H +
Sbjct: 66 SWNIMIGTCVQNGEEEKAIDIFLEMQREGSPCSEFTVSSVVCACAAKGDVFFCRQLHAFA 125
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ ++ FV L+DVY +CG + A +F +N+V+ ++I+ G+
Sbjct: 126 IKAVVDADVFVGTALIDVYAKCGSIEDASCVFEGMPERNDVTWSSIVAGF---------- 175
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMF-RDLLMRDGIEPTSFTFGSVLI 239
V N LY+E +F R M G+E F SV+
Sbjct: 176 -------------------------VQNELYEEGLVLFARGKEM--GLENNQFMISSVIR 208
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
ACA + +L +G+++HA+ G + FV ALV+MY + + A + F IE +L
Sbjct: 209 ACAGLAALIEGRQVHAIVCRTGFGPNNFVASALVDMYAKCGSIEEAYVLFCNIEKKNVVL 268
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGK 352
GF + + M LF EM + PD T +LSAC + +++G+
Sbjct: 269 WNAIISGFAKHACSSEVMNLFEEMQQTGMQPDEVTYVAVLSACVHVGLVDKGR 321
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 112/225 (49%), Gaps = 37/225 (16%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KCGS++DA VF+ MPER+ V+W+S+V
Sbjct: 143 VYAKCGSIEDASCVFEGMPERNDVTWSSIV------------------------------ 172
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
GF QN EE + + R + GLE N +SSV+ ACA L L G++ H +
Sbjct: 173 ------AGFVQNELYEEGLVLFARGKEMGLENNQFMISSVIRACAGLAALIEGRQVHAIV 226
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R GF N FV + LVD+Y +CG + A +F KN V N II G+ ++ +E
Sbjct: 227 CRTGFGPNNFVASALVDMYAKCGSIEEAYVLFCNIEKKNVVLWNAIISGFAKHACSSEVM 286
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRD 225
LF++M+ G+Q +++ +++S V L D+ S F DL+ R+
Sbjct: 287 NLFEEMQQTGMQPDEVTYVAVLSACVHVGLVDKGRSYF-DLMTRE 330
>gi|449462994|ref|XP_004149219.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
gi|449500964|ref|XP_004161240.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 624
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 167/457 (36%), Positives = 259/457 (56%), Gaps = 16/457 (3%)
Query: 150 KIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNS 209
+I + + +N N ++ Y E G + +A+ELFD M +R SW+ ++ GY
Sbjct: 75 QIATNGAFRNLAVANKLLYMYVERGALEDAQELFDGMS----KRHPYSWSVIVGGYAKVG 130
Query: 210 LYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVG 269
+ F MFR+LL R G ++ V+ AC D+ L+ G+ IH + + GL FV
Sbjct: 131 NFFSCFWMFRELL-RSGAPLDDYSAPVVIRACRDLKDLKCGRLIHCITLKCGLDYGHFVC 189
Query: 270 GALVEMYCRYQDLVAAQMAF-----DEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEML 324
LV+MY R + + A F ++ ++G + E G ++ F M
Sbjct: 190 ATLVDMYARCKVVEDAHQIFVKMWKRDLATWTVMIGALAESGVPVE-----SLVFFDRMR 244
Query: 325 SLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLK 384
+ + PD + ++ AC+ L M + K +HAY GY DV +GTA++DMYAKCGS++
Sbjct: 245 NQGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKCGSVE 304
Query: 385 HARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACV 444
AR + R+ ++++ +AM+ AY HG G++ + F +L SG P+ I+F+S L AC
Sbjct: 305 SARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMMLRSGILPNRITFVSLLYACS 364
Query: 445 HAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMW 503
HAG I+ G FF M Y V P +KHYTCMVDLL RAG L EA E I+ +P+ D V+W
Sbjct: 365 HAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMPVEKDEVLW 424
Query: 504 GALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDR 563
GALLG C H +L+ + A L++L+ G+YV+L+N++A AG+W D+A+TR M
Sbjct: 425 GALLGACRIHRHLDLAERVARSLLKLQSQKPGHYVLLSNIYANAGKWEDMAKTRDLMTKG 484
Query: 564 RMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTII 600
+ K PG +WIE +++++F D++H RS EIY ++
Sbjct: 485 GLRKIPGRTWIEVGEKLYQFGVGDKTHPRSNEIYKML 521
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 99/405 (24%), Positives = 162/405 (40%), Gaps = 45/405 (11%)
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SWS ++GG+ + G M + G + + V+ AC L+ L G+ H
Sbjct: 118 SWSVIVGGYAKVGNFFSCFWMFRELLRSGAPLDDYSAPVVIRACRDLKDLKCGRLIHCIT 177
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G FV LVD+Y RC + A +IF K ++ + +I E+G E+
Sbjct: 178 LKCGLDYGHFVCATLVDMYARCKVVEDAHQIFVKMWKRDLATWTVMIGALAESGVPVESL 237
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
FD+M + GI P +V+ A
Sbjct: 238 VFFDRMRN------------------------------------QGIVPDKVALVTVVYA 261
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFD--EIENIENL 298
CA + ++ K K IHA G D +G A+++MY + + +A+ FD ++ N+
Sbjct: 262 CAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKCGSVESARWIFDRMQVRNVITW 321
Query: 299 LGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYA 358
+ G+ A++LF ML + P+ T +L ACS +E G++ +
Sbjct: 322 SAMIAAYGYHGQ--GEKALELFPMMLRSGILPNRITFVSLLYACSHAGLIEEGQRFFSSM 379
Query: 359 I-RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST-PDLVSQNAMLTAYAMHGHGKE 416
G DV T +VD+ + G L A + + D V A+L A +H H
Sbjct: 380 WDEYGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMPVEKDEVLWGALLGACRIHRHLDL 439
Query: 417 GIAHFRRILA-SGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA 460
R +L +P H LS + A +AG + ++ DLM
Sbjct: 440 AERVARSLLKLQSQKPGHYVLLSNIYA--NAGKWEDMAKTRDLMT 482
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 102/229 (44%), Gaps = 36/229 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +C ++DA ++F M +RD L
Sbjct: 195 MYARCKVVEDAHQIFVKMWKRD------------------------------------LA 218
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+ +IG ++G E++ RM+ +G+ P+ L +V+ ACA+L ++ K H YI
Sbjct: 219 TWTVMIGALAESGVPVESLVFFDRMRNQGIVPDKVALVTVVYACAKLGAMNKAKAIHAYI 278
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
G+ + + ++D+Y +CG + SA IF + ++N ++ + +I Y +G +A
Sbjct: 279 NGTGYSLDVILGTAMIDMYAKCGSVESARWIFDRMQVRNVITWSAMIAAYGYHGQGEKAL 338
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEP 229
ELF M G+ I++ S++ L +E F + G+ P
Sbjct: 339 ELFPMMLRSGILPNRITFVSLLYACSHAGLIEEGQRFFSSMWDEYGVTP 387
Score = 42.0 bits (97), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 76/162 (46%), Gaps = 11/162 (6%)
Query: 352 KQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMH 411
+QVHA G ++ + L+ MY + G+L+ A+ + +S S + ++ YA
Sbjct: 70 RQVHAQIATNGAFRNLAVANKLLYMYVERGALEDAQELFDGMSKRHPYSWSVIVGGYAKV 129
Query: 412 GHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLK-- 469
G+ FR +L SG D S + AC +K G L+ +K L
Sbjct: 130 GNFFSCFWMFRELLRSGAPLDDYSAPVVIRACRDLKDLKCGR----LIHCITLKCGLDYG 185
Query: 470 HYTC--MVDLLSRAGELGEAYE-FIK--KIPMAPDSVMWGAL 506
H+ C +VD+ +R + +A++ F+K K +A +VM GAL
Sbjct: 186 HFVCATLVDMYARCKVVEDAHQIFVKMWKRDLATWTVMIGAL 227
>gi|224124578|ref|XP_002330058.1| predicted protein [Populus trichocarpa]
gi|222871483|gb|EEF08614.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 165/464 (35%), Positives = 263/464 (56%), Gaps = 28/464 (6%)
Query: 148 ALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVD 207
A K+F K N +S N ++ GY +NG ++EAR++FD+M +R ++SW +MI GYV
Sbjct: 13 ARKLFDKMPETNTISWNGLVSGYVQNGMISEARKVFDKMP----ERNVVSWTAMIRGYVQ 68
Query: 208 NSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTF 267
L +EA +F + R+ + T G LI ++ R+ ++ + D
Sbjct: 69 EGLIEEAELLFWRMPERNVVSWTVMLGG--LIEDGRVDEARQLFDMMPV-------KDVV 119
Query: 268 VGGALVEMYCRYQDLVAAQMAFDEI--ENI---ENLLGKMKEDG--------FEPNVYTW 314
+++ C L+ A+ FDE+ N+ +++ K+DG +E +
Sbjct: 120 ASTNMIDGLCSEGRLIEAREIFDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYERKGFEL 179
Query: 315 NAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALV 374
A+ LFS M + P +V +LS C SLA+++ G+QVH+ +R +D D+++ + L+
Sbjct: 180 EALALFSLMQREGVRPSFPSVISVLSVCGSLASLDHGRQVHSQLVRSQFDIDIYVSSVLI 239
Query: 375 DMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHI 434
MY KCG L A+ + R S+ D+V N+++ YA HG G++ + F + +S PD I
Sbjct: 240 TMYIKCGDLVTAKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHDMFSSSIAPDEI 299
Query: 435 SFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKK 493
+F+ LSAC + G +K G E F+ M + Y V P +HY CMVDLL RAG+L EA I+
Sbjct: 300 TFIGVLSACSYTGKVKEGLEIFESMKSKYQVDPKTEHYACMVDLLGRAGKLNEAMNLIEN 359
Query: 494 IPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDL 553
+P+ D+++WGALLG C +H NL+ +IAA +L++LEPNN G Y++L+NL++ RW D+
Sbjct: 360 MPVEADAIVWGALLGACRTHKNLDLAEIAAKKLLQLEPNNAGPYILLSNLYSSQSRWKDV 419
Query: 554 ARTRQKMKDRRMHKSPGCSWIEDRDEIHKFR-ASDRSHDRSEEI 596
R+ M+ + + KSPGCSWIE ++H F SH E I
Sbjct: 420 VELRKTMRAKNLRKSPGCSWIEVDKKVHIFSGGGSTSHPEHEMI 463
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 107/392 (27%), Positives = 183/392 (46%), Gaps = 65/392 (16%)
Query: 10 DAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGF 69
+A+K+F MPE + +SWN +V+ NG++ EA + ++M N+VSW+A+I G+
Sbjct: 12 EARKLFDKMPETNTISWNGLVSGYVQNGMISEARKVFDKMPE-----RNVVSWTAMIRGY 66
Query: 70 TQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNP 129
Q G EEA + +RM P +S + M
Sbjct: 67 VQEGLIEEAELLFWRM------PERNVVSWTV------------------------MLGG 96
Query: 130 FVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHL 189
+ +G VD R+ DM+ +K+ V+ +I G C G + EARE+FD+M
Sbjct: 97 LIEDGRVDEARQLFDMM---------PVKDVVASTNMIDGLCSEGRLIEAREIFDEMP-- 145
Query: 190 GVQRGIISWNSMISGYVDNSLYD-------------EAFSMFRDLLMRDGIEPTSFTFGS 236
QR +++W SMISG D+ + EA ++F L+ R+G+ P+ + S
Sbjct: 146 --QRNVVAWTSMISGEKDDGTWSTMIKIYERKGFELEALALF-SLMQREGVRPSFPSVIS 202
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
VL C + SL G+++H+ + D +V L+ MY + DLV A+ FD + +
Sbjct: 203 VLSVCGSLASLDHGRQVHSQLVRSQFDIDIYVSSVLITMYIKCGDLVTAKRVFDRFSSKD 262
Query: 297 NLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHA 356
++ G+ + + A+++F +M S + PD T +LSACS ++ G ++
Sbjct: 263 IVMWNSIIAGYAQHGFGEKALEVFHDMFSSSIAPDEITFIGVLSACSYTGKVKEGLEIFE 322
Query: 357 YAIRCGYDSDVHIG--TALVDMYAKCGSLKHA 386
+++ Y D +VD+ + G L A
Sbjct: 323 -SMKSKYQVDPKTEHYACMVDLLGRAGKLNEA 353
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 157/306 (51%), Gaps = 25/306 (8%)
Query: 6 GSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAV 65
G +D+A+++F MMP +D V+ +++ + G ++EA E + M N+V+W+++
Sbjct: 101 GRVDEARQLFDMMPVKDVVASTNMIDGLCSEGRLIEAREIFDEMPQ-----RNVVAWTSM 155
Query: 66 IGG-------------FTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSL 112
I G + + G++ EA+ + MQ EG+ P+ ++ SVL C L L
Sbjct: 156 ISGEKDDGTWSTMIKIYERKGFELEALALFSLMQREGVRPSFPSVISVLSVCGSLASLDH 215
Query: 113 GKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCE 172
G++ H + R+ F + +V + L+ +Y +CGD+++A ++F +FS K+ V N+II GY +
Sbjct: 216 GRQVHSQLVRSQFDIDIYVSSVLITMYIKCGDLVTAKRVFDRFSSKDIVMWNSIIAGYAQ 275
Query: 173 NGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSF 232
+G +A E+F M + I++ ++S E +F + + ++P +
Sbjct: 276 HGFGEKALEVFHDMFSSSIAPDEITFIGVLSACSYTGKVKEGLEIFESMKSKYQVDPKTE 335
Query: 233 TFGSVLIACADMNSLRKGKEIHALAIA--LGLQSDTFVGGALVEMYCRYQDLVAAQMAFD 290
+ AC R GK A+ + + +++D V GAL+ +++L A++A
Sbjct: 336 HY-----ACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLGACRTHKNLDLAEIAAK 390
Query: 291 EIENIE 296
++ +E
Sbjct: 391 KLLQLE 396
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 56/112 (50%), Gaps = 2/112 (1%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG L AK+VF +D V WNS++ A +G +ALE M S + P+ +
Sbjct: 241 MYIKCGDLVTAKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHDMFS-SSIAPDEI 299
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLS 111
++ V+ + G +E + + M+++ ++P + ++ R KL+
Sbjct: 300 TFIGVLSACSYTGKVKEGLEIFESMKSKYQVDPKTEHYACMVDLLGRAGKLN 351
>gi|359497527|ref|XP_003635554.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g22760-like [Vitis vinifera]
gi|296083555|emb|CBI23551.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 184/527 (34%), Positives = 285/527 (54%), Gaps = 18/527 (3%)
Query: 54 NETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLG 113
+++P+ SW+ I TQ+G +EA + +MQ GL P LSS L ACAR+ G
Sbjct: 65 SKSPDSFSWACAIRFSTQHGQFKEAFALYVQMQRWGLWPTTFALSSALKACARIAYRMGG 124
Query: 114 KEFHGYITRNGFMSNP---FVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGY 170
HG + + GF +V LVD Y + GDM A K+F + + +N VS N+++ GY
Sbjct: 125 LSIHGQVQKFGFSGGGDGIYVETALVDFYCKLGDMEIARKMFDEMAERNVVSWNSMLAGY 184
Query: 171 CENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPT 230
++G++ A+ +FD++ Q+ +ISWNSMISGY ++A S+F+ + R+
Sbjct: 185 LKSGDLVVAQRVFDEIP----QKDVISWNSMISGYARAGDMEKALSLFQQMPERNFASWN 240
Query: 231 SFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFD 290
+ G V D++S R + Q + ++ Y + D+ +A FD
Sbjct: 241 AMISGYVEFG--DIDSARSFFDAMP-------QRNNVSWMTMISGYSKCGDVDSACELFD 291
Query: 291 EIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLT--PDIYTVGIILSACSSLATM 348
++ + LL + N A++LF+ ML+ D+ PD T+ ++SACS L +
Sbjct: 292 QVGGKDLLLFNAMIACYAQNSRPKEALKLFNNMLNPDVNVQPDEMTLASVISACSQLGDL 351
Query: 349 ERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAY 408
G + +Y R G + D H+ TAL+D+YAKCGS+ A + + DLV+ AM+
Sbjct: 352 RFGPWIESYMRRLGIEMDGHLATALLDLYAKCGSIDKAYELFHGLRKKDLVAYTAMILGC 411
Query: 409 AMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSL 468
++G + I F ++ + P+ I+F+ L+A HAG ++ G F M Y++ PS+
Sbjct: 412 GINGKAIDAIKLFDEMVDAQIFPNSITFIGLLTAYNHAGLVEEGYHCFTSMKKYNLVPSV 471
Query: 469 KHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIE 528
HY MVDL RAG L EA E IK +PM P + +WGALL C H N+EFG+IAA E
Sbjct: 472 DHYGIMVDLFGRAGRLQEALELIKSMPMQPHAGVWGALLLACRLHNNVEFGEIAAQHCFE 531
Query: 529 LEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIE 575
LEP+ TG +L+N++A RW D+ R R+ K++ K PGCSW+E
Sbjct: 532 LEPDTTGYCSLLSNIYASGERWDDVKRLRKVTKEKGFSKIPGCSWME 578
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 118/454 (25%), Positives = 198/454 (43%), Gaps = 64/454 (14%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y K G ++ A+K+F M ER+ VSWNS++ +G ++ A + + D ++S
Sbjct: 153 YCKLGDMEIARKMFDEMAERNVVSWNSMLAGYLKSGDLVVAQRVFDEIPQKD-----VIS 207
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W+++I G+ + G E+A+ LF+ E R +S
Sbjct: 208 WNSMISGYARAGDMEKALS-LFQQMPE------RNFAS---------------------- 238
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
N ++ Y GD+ SA F +N VS T+I GY + G+V A E
Sbjct: 239 ----------WNAMISGYVEFGDIDSARSFFDAMPQRNNVSWMTMISGYSKCGDVDSACE 288
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRD-GIEPTSFTFGSVLIA 240
LFDQ+ + ++ +N+MI+ Y NS EA +F ++L D ++P T SV+ A
Sbjct: 289 LFDQVG----GKDLLLFNAMIACYAQNSRPKEALKLFNNMLNPDVNVQPDEMTLASVISA 344
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C+ + LR G I + LG++ D + AL+++Y + + A F + + +
Sbjct: 345 CSQLGDLRFGPWIESYMRRLGIEMDGHLATALLDLYAKCGSIDKAYELFHGLRKKDLVAY 404
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G N +A++LF EM+ + P+ T +L+A + +E G H +
Sbjct: 405 TAMILGCGINGKAIDAIKLFDEMVDAQIFPNSITFIGLLTAYNHAGLVEEG--YHCFTSM 462
Query: 361 CGYD---SDVHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNAMLTAYAMHGHGKE 416
Y+ S H G +VD++ + G L+ A K + P A+L A +H +
Sbjct: 463 KKYNLVPSVDHYGI-MVDLFGRAGRLQEALELIKSMPMQPHAGVWGALLLACRLHNN--- 518
Query: 417 GIAHFRRILASG---FRPDHISFLSALSACVHAG 447
F I A PD + S LS +G
Sbjct: 519 --VEFGEIAAQHCFELEPDTTGYCSLLSNIYASG 550
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNET-PNL 59
+Y KCGS+D A ++F + ++D V++ +++ C NG ++A++ + M +D + PN
Sbjct: 379 LYAKCGSIDKAYELFHGLRKKDLVAYTAMILGCGINGKAIDAIKLFDEM--VDAQIFPNS 436
Query: 60 VSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPN 93
+++ ++ + G EE M+ L P+
Sbjct: 437 ITFIGLLTAYNHAGLVEEGYHCFTSMKKYNLVPS 470
>gi|449477503|ref|XP_004155042.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Cucumis sativus]
Length = 990
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 171/545 (31%), Positives = 288/545 (52%), Gaps = 39/545 (7%)
Query: 55 ETPNLVSWSAVIGGFTQNGYDEEAIGMLFRM--QAEGLEPNARTLSSVLPACARLQKLSL 112
E ++VSW+++IG +++ G+ E +L +M + E +E N T+ ++LPAC +L
Sbjct: 375 ENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLS 434
Query: 113 GKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCE 172
+ HGY R+ F + N + Y +CG ++ A +F + K+
Sbjct: 435 LRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKS------------- 481
Query: 173 NGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSF 232
+ SWN++I G+ N +A + ++ R GI P F
Sbjct: 482 ----------------------VSSWNAVIGGHAQNGDPIKALDFYFEM-TRLGILPDDF 518
Query: 233 TFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI 292
+ S+L+AC + L+ GKEIH + GL+ ++FV +L+ +Y + F+ +
Sbjct: 519 SIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFERM 578
Query: 293 ENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGK 352
+ ++ G+ N A+ LF +MLS L PD + IL ACS L+ + GK
Sbjct: 579 GDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGK 638
Query: 353 QVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHG 412
+VH +A++ D + +L+DMYAK G L H++ + R++ ++ S N M+T + +HG
Sbjct: 639 EVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHG 698
Query: 413 HGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFF-DLMAYYDVKPSLKHY 471
G + + F + S +PD +FL L AC HAG + G + + Y ++P L+HY
Sbjct: 699 QGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEGLNYLAQMQTLYKLEPELEHY 758
Query: 472 TCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEP 531
C++D+L RAG L EA FI ++P PD+ +W +LL +++ +LE G+ A++L+ LE
Sbjct: 759 ACVIDMLGRAGRLNEALNFINEMPEEPDAKIWSSLLSSSITYVDLEMGEKFAEKLLALEA 818
Query: 532 NNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHD 591
N +Y++L+NL+A AG+W + RQKMKD + K GCSWIE R +++ F A + S+
Sbjct: 819 NKADSYILLSNLYATAGKWDVVRMVRQKMKDLSLQKDVGCSWIELRGKVYSFIAGENSNP 878
Query: 592 RSEEI 596
S+EI
Sbjct: 879 SSDEI 883
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 123/525 (23%), Positives = 225/525 (42%), Gaps = 89/525 (16%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+YGKCG LD+A ++F MPE++ +SWNS++ + NG LEA +
Sbjct: 254 LYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLE--------- 304
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+GL P+ T+ ++LP C+ + +G HG
Sbjct: 305 -------------------------SGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMA 339
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G + V N L+D+Y +CG + A +F K K+ VS N++I Y G V
Sbjct: 340 VKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVF--- 396
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGI-EPTSFTFGSVLI 239
E F + R + M + + E T ++L
Sbjct: 397 --------------------------------ETFDLLRKMWMEEELMEVNEVTILNLLP 424
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAF-----DEIEN 294
AC + + L + +H ++ Q + A + Y + LV A+ F + +
Sbjct: 425 ACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSS 484
Query: 295 IENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV 354
++G ++G +P A+ + EM L + PD +++ +L AC L ++ GK++
Sbjct: 485 WNAVIGGHAQNG-DP----IKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEI 539
Query: 355 HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHG 414
H + +R G + + + +L+ +Y C + R ++R+ + V NAML+ Y+ +
Sbjct: 540 HGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFERMGDKNSVCWNAMLSGYSQNELP 599
Query: 415 KEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSL---KHY 471
E ++ FR++L+ G PD I+ S L AC ++ G E + + +K SL
Sbjct: 600 NEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKE----VHCFALKNSLMEDNFV 655
Query: 472 TC-MVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
C ++D+ +++G LG + ++ + W ++ G HG
Sbjct: 656 ACSLMDMYAKSGFLGHSQRIFNRLN-GKEVASWNVMITGFGVHGQ 699
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 122/469 (26%), Positives = 210/469 (44%), Gaps = 64/469 (13%)
Query: 4 KCGSLDDAKKVFKMMPERDCVSWN---------SVVTACAANGLVLEALECLERMSSLDN 54
KCG + + + + + E CVS ++T + G LE+ +R+ +
Sbjct: 116 KCGQYKNVE-IGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLN--- 171
Query: 55 ETPNLVSWSAVIGGFTQNGYDEEAIGMLFRM-QAEGLEPNARTLSSVLPACARLQKLSLG 113
NL W+A++ G+ +N +EAI + +P+ T ++ AC + LG
Sbjct: 172 --KNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLG 229
Query: 114 KEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCEN 173
K HG + G + + FV N ++ +Y +CG +
Sbjct: 230 KSVHGMAVKMGLIMDLFVGNAMIALYGKCGFL---------------------------- 261
Query: 174 GNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMR-DGIEPTSF 232
EA ELFD+M ++ +ISWNS+I G+ +N + EA+ FR LL DG+ P
Sbjct: 262 ---DEAVELFDKMP----EQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVA 314
Query: 233 TFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI 292
T ++L C+ ++ G IH +A+ LGL + V AL++MY + L A + F +I
Sbjct: 315 TMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKI 374
Query: 293 EN-----IENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGII--LSACSSL 345
EN +++G +GF + L +M + ++ V I+ L AC
Sbjct: 375 ENKSVVSWNSMIGAYSREGF-----VFETFDLLRKMWMEEELMEVNEVTILNLLPACLEE 429
Query: 346 ATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAML 405
+ + + +H Y++R + I A + YAKCGSL A + ++T + S NA++
Sbjct: 430 SELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVI 489
Query: 406 TAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSE 454
+A +G + + + + G PD S +S L AC G ++ G E
Sbjct: 490 GGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKE 538
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 107/389 (27%), Positives = 185/389 (47%), Gaps = 23/389 (5%)
Query: 136 VDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGI 195
V++ R+ +ML FS + N +I Y G E+R +FD++ + + +
Sbjct: 123 VEIGRKLDEMLCVSSQFSGDFVLN----TRLITMYSICGYPLESRLVFDRL----LNKNL 174
Query: 196 ISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHA 255
WN+++SGYV N LYDEA F +L+ +P +FTF ++ AC + GK +H
Sbjct: 175 FQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHG 234
Query: 256 LAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWN 315
+A+ +GL D FVG A++ +Y + L A FD++ + GF N +
Sbjct: 235 MAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLE 294
Query: 316 AMQLFSEMLSL--DLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTAL 373
A + F +L L PD+ T+ +L CS ++ G +H A++ G ++ + AL
Sbjct: 295 AYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNAL 354
Query: 374 VDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASG--FRP 431
+DMY+KCG L A + +++I +VS N+M+ AY+ G E R++
Sbjct: 355 IDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEV 414
Query: 432 DHISFLSALSACVHAGSIKTGSEFFDLMAY--YDVKPSLKHYTCMVDLLSRAGELGEAYE 489
+ ++ L+ L AC+ SE L A Y ++ S ++ + + A +
Sbjct: 415 NEVTILNLLPACLEE------SELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLV 468
Query: 490 FIKKI--PMAPDSV-MWGALLGGCVSHGN 515
F + + M SV W A++GG +G+
Sbjct: 469 FAEHVFFGMNTKSVSSWNAVIGGHAQNGD 497
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 90/241 (37%), Gaps = 38/241 (15%)
Query: 327 DLTPDIYTVGIILSACSSLATMERGKQV-HAYAIRCGYDSDVHIGTALVDMYAKCGSLKH 385
DL +G++L C +E G+++ + + D + T L+ MY+ CG
Sbjct: 102 DLAQRKEAMGMLLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLE 161
Query: 386 ARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILA-SGFRPDHISFLSALSACV 444
+RL + R+ +L NA+++ Y + E I F +++ + F+PD+ +F + AC
Sbjct: 162 SRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACT 221
Query: 445 HAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIP--------- 495
I G + + L M+ L + G L EA E K+P
Sbjct: 222 GKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNS 281
Query: 496 ---------------------------MAPDSVMWGALLGGCVSHGNLEFGQIAADRLIE 528
+ PD LL C GN++ G + ++
Sbjct: 282 LIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVK 341
Query: 529 L 529
L
Sbjct: 342 L 342
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 53/117 (45%), Gaps = 2/117 (1%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G L ++++F + ++ SWN ++T +G +A+E E M D + P+
Sbjct: 662 MYAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQ-PDRF 720
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQA-EGLEPNARTLSSVLPACARLQKLSLGKEF 116
++ V+ G E + L +MQ LEP + V+ R +L+ F
Sbjct: 721 TFLGVLQACCHAGLVSEGLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNF 777
>gi|302762388|ref|XP_002964616.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
gi|300168345|gb|EFJ34949.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
Length = 795
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 183/599 (30%), Positives = 302/599 (50%), Gaps = 77/599 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGSL+DAK++F ERMS ++
Sbjct: 166 MYAKCGSLEDAKRLF-------------------------------ERMSG-----RSVS 189
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A+I + Q+G+ EEAI + M +EP+ RT +SVL AC+ L L G++ H I
Sbjct: 190 SWNAMIAAYAQSGHFEEAIRLYEDMD---VEPSVRTFTSVLSACSNLGLLDQGRKIHALI 246
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G + + N L+ +Y RC + A KIF +
Sbjct: 247 SSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLP------------------------ 282
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+R ++SW++MI+ + + L+DEA + + + +G+ P +TF SVL+A
Sbjct: 283 -----------RRDVVSWSAMIAAFAETDLFDEAIEFYSKMQL-EGVRPNYYTFASVLLA 330
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA + LR G+ +H + G + G ALV++Y Y L A+ FD+IEN + L
Sbjct: 331 CASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLW 390
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTV-GIILSACSSLATMERGKQVHAYAI 359
+ G+ + ++L+ EM + P + ++SAC+SL +Q H+
Sbjct: 391 TVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQAHSDIE 450
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
G SD + T+LV+MY++ G+L+ AR + ++S+ D ++ ++ YA HG +
Sbjct: 451 ADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALG 510
Query: 420 HFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFF-DLMAYYDVKPSLKHYTCMVDLL 478
++ + G P ++F+ L AC HAG + G + F + + Y + P++ HY+C++DLL
Sbjct: 511 LYKEMELEGAEPSELTFMVVLYACSHAGLQEQGKQLFISIQSDYAMHPNIAHYSCIIDLL 570
Query: 479 SRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYV 538
SRAG L +A E I +P+ P+ V W +LLG H +++ AA ++ +L+P + +YV
Sbjct: 571 SRAGRLSDAEELINAMPVEPNDVTWSSLLGASRIHKDVKRATHAAGQITKLDPVDPASYV 630
Query: 539 MLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
+L+N+ A G + +A R M R + K G SWIE D+IH+F D SH R +EI+
Sbjct: 631 LLSNVHAVTGNLAGMASVRNTMVARGVKKRRGSSWIEVADQIHEFNVGDNSHPRFQEIF 689
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 114/425 (26%), Positives = 194/425 (45%), Gaps = 67/425 (15%)
Query: 103 ACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVS 162
A + Q L ++ H I+ +N F+ N +V Y +CG + SA F + KN+ S
Sbjct: 33 ALRQCQDLESVRQIHDRIS-GAASANVFLGNEIVRAYGKCGSVASARAAFDAIARKNDYS 91
Query: 163 CNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLL 222
+++ Y +NG+ A +L+ +M+
Sbjct: 92 WGSMLTAYAQNGHYRAALDLYKRMD----------------------------------- 116
Query: 223 MRDGIEPTSFTFGSVLIACADMNSLRKGKEIHA-LAIALGLQSDTFVGGALVEMYCRYQD 281
++P + +VL ACA + +L +GK IH+ ++ GL+ D + +L+ MY +
Sbjct: 117 ----LQPNPVVYTTVLGACASIKALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGS 172
Query: 282 LVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQL-------FSEMLSL----DLTP 330
L A+ F E + G+ +V +WNAM F E + L D+ P
Sbjct: 173 LEDAKRLF------ERMSGR--------SVSSWNAMIAAYAQSGHFEEAIRLYEDMDVEP 218
Query: 331 DIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAY 390
+ T +LSACS+L +++G+++HA G + D+ + AL+ MYA+C L A +
Sbjct: 219 SVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIF 278
Query: 391 KRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIK 450
+R+ D+VS +AM+ A+A E I + ++ G RP++ +F S L AC G ++
Sbjct: 279 QRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLR 338
Query: 451 TGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGC 510
G D + K +L + T +VDL + G L EA +I D +W L+GG
Sbjct: 339 AGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIE-NRDEGLWTVLIGGY 397
Query: 511 VSHGN 515
G+
Sbjct: 398 SKQGH 402
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 136/281 (48%), Gaps = 12/281 (4%)
Query: 230 TSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAF 289
+S + L C D+ S+R +IH I+ ++ F+G +V Y + + +A+ AF
Sbjct: 26 SSGHYRDALRQCQDLESVR---QIHD-RISGAASANVFLGNEIVRAYGKCGSVASARAAF 81
Query: 290 DEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATME 349
D I + + N + A+ L+ M DL P+ +L AC+S+ +E
Sbjct: 82 DAIARKNDYSWGSMLTAYAQNGHYRAALDLYKRM---DLQPNPVVYTTVLGACASIKALE 138
Query: 350 RGKQVHA-YAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAY 408
GK +H+ + G DV + +L+ MYAKCGSL+ A+ ++R+S + S NAM+ AY
Sbjct: 139 EGKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRSVSSWNAMIAAY 198
Query: 409 AMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSL 468
A GH +E I + + P +F S LSAC + G + G + L++ + L
Sbjct: 199 AQSGHFEEAIRLYEDM---DVEPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDL 255
Query: 469 KHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
++ + +R L +A + +++P D V W A++
Sbjct: 256 SLQNALLTMYARCKCLDDAAKIFQRLPR-RDVVSWSAMIAA 295
>gi|296090287|emb|CBI40106.3| unnamed protein product [Vitis vinifera]
Length = 590
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 191/613 (31%), Positives = 305/613 (49%), Gaps = 75/613 (12%)
Query: 4 KCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWS 63
+CG L V K + D N V+ A G A + + M NLVSWS
Sbjct: 20 RCG-LSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEMFE-----KNLVSWS 73
Query: 64 AVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRN 123
A+I G+ Q G + AI + +M L PN +SV+ ACA L ++LG++ H +
Sbjct: 74 AMISGYDQAGEPQMAIDLYSQM---FLVPNEYVFASVISACASLSAVTLGQKIHSRSLKF 130
Query: 124 GFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELF 183
G+ S FV N L+ +Y +C AL +F+ E +C
Sbjct: 131 GYESISFVSNSLISMYMKCNQCSDALSVFTN---TPEPNC-------------------- 167
Query: 184 DQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACAD 243
+S+N++I+G+V+N + F+ L+ + G+ P F F VL C
Sbjct: 168 ------------VSYNALITGFVENQQLERGLEFFK-LMRQQGLIPDRFAFMGVLGICTT 214
Query: 244 MNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMK 303
+L++G E+H + L L S F+G ++ MY + A+ AF IE
Sbjct: 215 TENLKRGAELHCQTVKLNLDSTPFIGNVIITMYSELNLIQEAEKAFRLIE---------- 264
Query: 304 EDGFEPNVYTWNAM--------------QLFSEMLS-LDLTPDIYTVGIILSACSSLATM 348
E +V +WN + ++F M ++ PD +T L+AC+ LA+M
Sbjct: 265 ----EKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLASM 320
Query: 349 ERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAY 408
GKQ+HA+ +R D+ +G ALV+MYAKCG + +A + ++ +LVS N ++ +
Sbjct: 321 SHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIAGF 380
Query: 409 AMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPS 467
HG G+ + F ++ ASG RPD ++F+ L+AC HAG + G +F+ M Y + P
Sbjct: 381 GNHGLGERAVELFEQMNASGIRPDSVTFIGLLTACNHAGLVDKGQLYFNSMEETYGIAPD 440
Query: 468 LKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLI 527
++H++C++D+L RAG L EA E+++K P D V+ +LL HG++ G+ A L+
Sbjct: 441 IEHFSCLIDMLGRAGRLNEAEEYMRKFPFWNDPVVLVSLLSASRLHGDVVIGERLAKWLL 500
Query: 528 ELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASD 587
+L+P T YV+L+NL+A G W +A R+++K + K PG S IE + KF D
Sbjct: 501 KLQPVTTSPYVLLSNLYASDGMWDSVAEARKRLKGSGLKKEPGHSLIEVNGSVEKFTIGD 560
Query: 588 RSHDRSEEIYTII 600
+H R +EI I+
Sbjct: 561 FTHLRIKEIKGIL 573
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 132/292 (45%), Gaps = 32/292 (10%)
Query: 233 TFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI 292
T S+L C+ +LR G +HA + G QSD F+ ++ MY + A+ FDE+
Sbjct: 5 TLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEM 64
Query: 293 ENIENLLGKMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGII 338
FE N+ +W+AM L+S+M L P+ Y +
Sbjct: 65 --------------FEKNLVSWSAMISGYDQAGEPQMAIDLYSQMF---LVPNEYVFASV 107
Query: 339 LSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDL 398
+SAC+SL+ + G+++H+ +++ GY+S + +L+ MY KC A + P+
Sbjct: 108 ISACASLSAVTLGQKIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNC 167
Query: 399 VSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDL 458
VS NA++T + + + G+ F+ + G PD +F+ L C ++K G+E
Sbjct: 168 VSYNALITGFVENQQLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQ 227
Query: 459 MAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGC 510
++ + ++ + S + EA + + I D + W L+ C
Sbjct: 228 TVKLNLDSTPFIGNVIITMYSELNLIQEAEKAFRLIE-EKDVISWNTLIAAC 278
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 98/421 (23%), Positives = 164/421 (38%), Gaps = 87/421 (20%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC DA VF PE +CVS+N+++T
Sbjct: 145 MYMKCNQCSDALSVFTNTPEPNCVSYNALIT----------------------------- 175
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
GF +N E + M+ +GL P+ VL C + L G E H
Sbjct: 176 -------GFVENQQLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQT 228
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVG--YCENGNVAE 178
+ S PF+ N ++ +Y + A K F K+ +S NT+I +C++
Sbjct: 229 VKLNLDSTPFIGNVIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDD----- 283
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
+ + +F+ + + P FTF S L
Sbjct: 284 --------------------------------HAKGLRVFKHMTEETNVRPDDFTFTSAL 311
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCR-----YQDLVAAQMAFDEIE 293
ACA + S+ GK+IHA + L D VG ALV MY + Y + ++M +
Sbjct: 312 AACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYDIFSKMVHHNLV 371
Query: 294 NIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGK- 352
+ ++ GF + A++LF +M + + PD T +L+AC+ +++G+
Sbjct: 372 SWNTIIA-----GFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTACNHAGLVDKGQL 426
Query: 353 QVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST-PDLVSQNAMLTAYAMH 411
++ G D+ + L+DM + G L A ++ D V ++L+A +H
Sbjct: 427 YFNSMEETYGIAPDIEHFSCLIDMLGRAGRLNEAEEYMRKFPFWNDPVVLVSLLSASRLH 486
Query: 412 G 412
G
Sbjct: 487 G 487
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 72/149 (48%), Gaps = 9/149 (6%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG + A +F M + VSWN+++ +GL A+E E+M++ P+ V
Sbjct: 348 MYAKCGCIGYAYDIFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNA-SGIRPDSV 406
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE---GLEPNARTLSSVLPACARLQKLSLGKEFH 117
++ ++ G ++ G L+ E G+ P+ S ++ R +L+ +E
Sbjct: 407 TFIGLLTACNHAGLVDK--GQLYFNSMEETYGIAPDIEHFSCLIDMLGRAGRLNEAEE-- 462
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDML 146
Y+ + F ++P V+ L+ R GD++
Sbjct: 463 -YMRKFPFWNDPVVLVSLLSASRLHGDVV 490
>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 919
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 181/636 (28%), Positives = 327/636 (51%), Gaps = 81/636 (12%)
Query: 2 YGKCGSLDDAKKVFKMMP----ERDCVSWNSVVTACAA---------------------- 35
+ +CG+ + A ++F+ M DCV+ S++ ACA+
Sbjct: 219 HAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPD 278
Query: 36 -------------NGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGML 82
G+++EALE + + N+V W+ ++ + Q ++ +
Sbjct: 279 YIIEGSLLDLYVKCGVIVEALEIFK-----SGDRTNVVLWNLMLVAYGQISDLAKSFDLF 333
Query: 83 FRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRC 142
+M A G+ PN T +L C +++LG++ H + GF S+ +V L+D+Y +
Sbjct: 334 CQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMYVSGVLIDMYSKY 393
Query: 143 GDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMI 202
G + A +I V EA++ ++SW SMI
Sbjct: 394 GWLDKARRIL----------------------EVLEAKD-------------VVSWTSMI 418
Query: 203 SGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGL 262
+GYV + EA F+D+ + GI P + S + ACA + ++R+G++IH+ G
Sbjct: 419 AGYVQHEFCKEALETFKDMQLF-GIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGY 477
Query: 263 QSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSE 322
+D + ALV +Y R A F+ IE+ + + GF + A+++F +
Sbjct: 478 SADVSIWNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALEVFIK 537
Query: 323 MLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGS 382
M + +++T +SA ++LA +++GKQ+HA I+ G S+ + AL+ +Y KCGS
Sbjct: 538 MYQAGVKYNVFTFVSSISASANLADIKQGKQIHATVIKTGCTSETEVANALISLYGKCGS 597
Query: 383 LKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSA 442
++ A++ + +S + VS N ++T+ + HG G E + F ++ G +P+ ++F+ L+A
Sbjct: 598 IEDAKMQFFEMSERNHVSWNTIITSCSQHGWGLEALDLFDQMKQEGLKPNDVTFIGVLAA 657
Query: 443 CVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSV 501
C H G ++ G +F M+ + + P HY C+VD+L RAG+L A +F++++P++ +++
Sbjct: 658 CSHVGLVEEGLGYFKSMSSEHGIHPRPDHYACVVDILGRAGQLDRARKFVEEMPVSANAM 717
Query: 502 MWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMK 561
+W LL C H N+E G++AA L+ELEP+++ +YV+L+N +A G+W+ R+ MK
Sbjct: 718 VWRTLLSACRVHKNIEIGELAAKYLLELEPHDSASYVLLSNAYAVTGKWACRDHVRKMMK 777
Query: 562 DRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
DR + K PG SWIE ++ +H F DR H + +IY
Sbjct: 778 DRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAHQIY 813
Score = 211 bits (538), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 137/510 (26%), Positives = 232/510 (45%), Gaps = 70/510 (13%)
Query: 22 DCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGM 81
D ++ N ++ A GLV A E++S+ DN VSW A++ G+ +NG EEA+G+
Sbjct: 76 DRIAGNLLIDLYAKKGLVQRARRVFEQLSARDN-----VSWVAMLSGYARNGLGEEAVGL 130
Query: 82 LFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRR 141
+M G+ P LSSVL AC + G+ H + + G S V N L+ +Y R
Sbjct: 131 YHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNALIALYLR 190
Query: 142 CGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSM 201
G + A ++FS+ + V+ NT+I + + GN A E+F++M
Sbjct: 191 FGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMR-------------- 236
Query: 202 ISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALG 261
+SG+ P T S+L ACA + L KGK++H+ + G
Sbjct: 237 LSGWT----------------------PDCVTIASLLAACASIGDLNKGKQLHSYLLKAG 274
Query: 262 LQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAM---- 317
+ D + G+L+++Y + +V A F + G NV WN M
Sbjct: 275 MSPDYIIEGSLLDLYVKCGVIVEALEIF--------------KSGDRTNVVLWNLMLVAY 320
Query: 318 ----------QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDV 367
LF +M++ + P+ +T +L C+ + G+Q+H +I+ G++SD+
Sbjct: 321 GQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDM 380
Query: 368 HIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILAS 427
++ L+DMY+K G L AR + + D+VS +M+ Y H KE + F+ +
Sbjct: 381 YVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLF 440
Query: 428 GFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEA 487
G PD+I SA+SAC +++ G + + + + +V+L +R G EA
Sbjct: 441 GIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSADVSIWNALVNLYARCGRSKEA 500
Query: 488 YEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
+ + I D + W ++ G G E
Sbjct: 501 FSLFEAIEH-KDKITWNGMVSGFAQSGLYE 529
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/409 (23%), Positives = 175/409 (42%), Gaps = 83/409 (20%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G LD A+++ +++ +D VSW S
Sbjct: 389 MYSKYGWLDKARRILEVLEAKDVVSWTS-------------------------------- 416
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+I G+ Q+ + +EA+ MQ G+ P+ L+S + ACA ++ + G++ H +
Sbjct: 417 ----MIAGYVQHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRV 472
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+G+ ++ + N LV++Y RCG A +F K++++ N ++ G+ ++G EA
Sbjct: 473 YVSGYSADVSIWNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEAL 532
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
E+F +M GV+ + FTF S + A
Sbjct: 533 EVFIKMYQAGVKYNV------------------------------------FTFVSSISA 556
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
A++ +++GK+IHA I G S+T V AL+ +Y + + A+M F E+ ++
Sbjct: 557 SANLADIKQGKQIHATVIKTGCTSETEVANALISLYGKCGSIEDAKMQFFEMSERNHVSW 616
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
+ + A+ LF +M L P+ T +L+ACS + +E G Y
Sbjct: 617 NTIITSCSQHGWGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGL---GYFKS 673
Query: 361 CGYDSDVHIG----TALVDMYAKCGSLKHARLAYKRISTPDLVSQNAML 405
+ +H +VD+ + G L AR + + VS NAM+
Sbjct: 674 MSSEHGIHPRPDHYACVVDILGRAGQLDRARKFVEEMP----VSANAMV 718
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 152/338 (44%), Gaps = 21/338 (6%)
Query: 191 VQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKG 250
+R S N ++G++ + ++ S+F + + GSV ACA
Sbjct: 2 TRRAAASLNKSLTGFLAHEDPEKLLSLFAAKVRQ------CRGLGSVDFACALRECRGSV 55
Query: 251 KE------IHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKE 304
K IHA AI GL D G L+++Y + + A+ F+++ +N+
Sbjct: 56 KHWPLVPVIHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAML 115
Query: 305 DGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYD 364
G+ N A+ L+ +M + P Y + +LSAC+ A E+G+ VHA + G
Sbjct: 116 SGYARNGLGEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSC 175
Query: 365 SDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRI 424
S+ +G AL+ +Y + GSL A + + D V+ N +++ +A G+G+ + F +
Sbjct: 176 SETVVGNALIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEM 235
Query: 425 LASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGEL 484
SG+ PD ++ S L+AC G + G + + + P ++DL + G +
Sbjct: 236 RLSGWTPDCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVI 295
Query: 485 GEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIA 522
EA E K + V+W +L + +GQI+
Sbjct: 296 VEALEIFKSGDRT-NVVLWNLML--------VAYGQIS 324
>gi|77552605|gb|ABA95402.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 1000
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 205/747 (27%), Positives = 342/747 (45%), Gaps = 160/747 (21%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERM----------- 49
+YG G + DA+++F MPER+ VSW +++ A ++NG + EAL +M
Sbjct: 88 LYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSSNGYLEEALRAYRQMRRDGVPCNANA 147
Query: 50 --------SSLDNETPNL------------------------------------------ 59
SL+NE P L
Sbjct: 148 FATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVANSLITMFGNLGRVHDAEKLFDRME 207
Query: 60 ----VSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKE 115
+SW+A+I ++ G + + M+ GL P+A TL S++ CA S G
Sbjct: 208 EHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASSDHFSHGSG 267
Query: 116 FHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGN 175
H R+ S+ V+N LV++Y G + A +F S ++ +S NT+I Y +N N
Sbjct: 268 IHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCN 327
Query: 176 VAEAR----ELFDQME-------------------------------HLGVQRGIISWNS 200
+A +LF E L +QR ++ NS
Sbjct: 328 STDALKTLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNS 387
Query: 201 MISGYVDNSLYDEAFSMFRDLLMRD------------------------------GIEPT 230
+I+ Y + ++A +F+ + D GI+P
Sbjct: 388 LITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPN 447
Query: 231 SFTFGSVLIACADMNSLRK-GKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAF 289
T ++ + A N L G+ +HA I G SD +V +L+ MY + +L ++ F
Sbjct: 448 YITMINIHGSFASSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIF 507
Query: 290 DEIENIENLLGKMKEDGFEPNVYTWNA--------------MQLFSEMLSLDLTPDIYTV 335
+ I N N+ +WNA ++LF +M D +
Sbjct: 508 NSITN--------------KNIVSWNAIIAANVQLGHGEEALKLFIDMQHAGNKLDRVCL 553
Query: 336 GIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST 395
LS+C+SLA++E G Q+H ++ G DSD ++ A +DMY KCG + +
Sbjct: 554 AECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMDEMLQVVPDQAI 613
Query: 396 PDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEF 455
N +++ YA +G+ KE F++++A+G +PD+++F++ LSAC HAG + G ++
Sbjct: 614 RPQQCWNTLISGYAKYGYFKEAEETFKQMVATGRKPDYVTFVALLSACSHAGLVDKGIDY 673
Query: 456 FDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
++ MA + V P +KH C+VDLL R G EA +FI+++P+ P+ ++W +LL +H
Sbjct: 674 YNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAEKFIEEMPVLPNDLIWRSLLSSSRTHK 733
Query: 515 NLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWI 574
NLE G+ A +L+EL+P + YV+L+NL+A RW+D+ + R MK ++K P CSW+
Sbjct: 734 NLEIGRKTAKKLLELDPFDDSAYVLLSNLYATNARWADVDKLRSHMKTININKRPACSWL 793
Query: 575 EDRDEIHKFRASDRSHDRSEEIYTIID 601
+ ++E+ F DR H +E+IY +D
Sbjct: 794 KLKNEVSTFGIGDRGHKHAEKIYAKLD 820
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 120/522 (22%), Positives = 222/522 (42%), Gaps = 82/522 (15%)
Query: 54 NETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQK---L 110
+ TP+ +W + G + G D A ML M+ G+ + L+S++ AC R + +
Sbjct: 3 DRTPS--TWYTAVSGCVRCGRDGTAFEMLRGMRERGVPLSGFALASLVTACERRGRDEGI 60
Query: 111 SLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGY 170
+ G H R G M N ++ L+ +Y
Sbjct: 61 ACGAAIHALTHRAGLMGNVYIGTALLHLYG------------------------------ 90
Query: 171 CENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPT 230
G V++A+ LF +M +R ++SW +++ N +EA +R + RDG+
Sbjct: 91 -SRGIVSDAQRLFWEMP----ERNVVSWTALMVALSSNGYLEEALRAYRQM-RRDGVPCN 144
Query: 231 SFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFD 290
+ F +V+ C + + G ++ + I GLQ+ V +L+ M+ + A+ FD
Sbjct: 145 ANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVANSLITMFGNLGRVHDAEKLFD 204
Query: 291 EIENIENLLGKMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVG 336
+E E + +WNAM +FS+M L PD T+
Sbjct: 205 RME--------------EHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLC 250
Query: 337 IILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTP 396
++S C+S G +H+ +R DS V + ALV+MY+ G L A + +S
Sbjct: 251 SLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRR 310
Query: 397 DLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFF 456
DL+S N M+++Y + + + + ++ + P+H++F SAL AC G++ G
Sbjct: 311 DLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVH 370
Query: 457 DLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNL 516
++ ++ +L ++ + + + +A + + +P D V + L+GG + L
Sbjct: 371 AIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMP-THDIVSYNVLIGG---YAVL 426
Query: 517 EFGQIAAD-----RLIELEPNNTGNYVMLANLFAYAGRWSDL 553
E G A R ++P NY+ + N+ +DL
Sbjct: 427 EDGTKAMQVFSWMRSAGIKP----NYITMINIHGSFASSNDL 464
>gi|449441113|ref|XP_004138328.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Cucumis sativus]
Length = 990
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 171/545 (31%), Positives = 288/545 (52%), Gaps = 39/545 (7%)
Query: 55 ETPNLVSWSAVIGGFTQNGYDEEAIGMLFRM--QAEGLEPNARTLSSVLPACARLQKLSL 112
E ++VSW+++IG +++ G+ E +L +M + E +E N T+ ++LPAC +L
Sbjct: 375 ENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLS 434
Query: 113 GKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCE 172
+ HGY R+ F + N + Y +CG ++ A +F + K+
Sbjct: 435 LRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKS------------- 481
Query: 173 NGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSF 232
+ SWN++I G+ N +A + ++ R GI P F
Sbjct: 482 ----------------------VSSWNAVIGGHAQNGDPIKALDFYFEM-TRLGILPDDF 518
Query: 233 TFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI 292
+ S+L+AC + L+ GKEIH + GL+ ++FV +L+ +Y + F+ +
Sbjct: 519 SIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFETM 578
Query: 293 ENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGK 352
+ ++ G+ N A+ LF +MLS L PD + IL ACS L+ + GK
Sbjct: 579 GDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGK 638
Query: 353 QVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHG 412
+VH +A++ D + +L+DMYAK G L H++ + R++ ++ S N M+T + +HG
Sbjct: 639 EVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHG 698
Query: 413 HGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFF-DLMAYYDVKPSLKHY 471
G + + F + S +PD +FL L AC HAG + G + + Y ++P L+HY
Sbjct: 699 QGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEGLNYLAQMQTLYKLEPELEHY 758
Query: 472 TCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEP 531
C++D+L RAG L EA FI ++P PD+ +W +LL +++ +LE G+ A++L+ LE
Sbjct: 759 ACVIDMLGRAGRLNEALNFINEMPEEPDAKIWSSLLSSSITYVDLEMGEKFAEKLLALEA 818
Query: 532 NNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHD 591
N +Y++L+NL+A AG+W + RQKMKD + K GCSWIE R +++ F A + S+
Sbjct: 819 NKADSYILLSNLYATAGKWDVVRMVRQKMKDLSLQKDVGCSWIELRGKVYSFIAGENSNP 878
Query: 592 RSEEI 596
S+EI
Sbjct: 879 SSDEI 883
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 122/525 (23%), Positives = 224/525 (42%), Gaps = 89/525 (16%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+YGKCG LD+A ++F MPE++ +SWNS++ + NG LEA +
Sbjct: 254 LYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLE--------- 304
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+GL P+ T+ ++LP C+ + +G HG
Sbjct: 305 -------------------------SGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMA 339
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G + V N L+D+Y +CG + A +F K K+ VS N++I Y G V
Sbjct: 340 VKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVF--- 396
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGI-EPTSFTFGSVLI 239
E F + R + M + + E T ++L
Sbjct: 397 --------------------------------ETFDLLRKMWMEEELMEVNEVTILNLLP 424
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAF-----DEIEN 294
AC + + L + +H ++ Q + A + Y + LV A+ F + +
Sbjct: 425 ACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSS 484
Query: 295 IENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV 354
++G ++G +P A+ + EM L + PD +++ +L AC L ++ GK++
Sbjct: 485 WNAVIGGHAQNG-DP----IKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEI 539
Query: 355 HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHG 414
H + +R G + + + +L+ +Y C + R ++ + + V NAML+ Y+ +
Sbjct: 540 HGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFETMGDKNSVCWNAMLSGYSQNELP 599
Query: 415 KEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSL---KHY 471
E ++ FR++L+ G PD I+ S L AC ++ G E + + +K SL
Sbjct: 600 NEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKE----VHCFALKNSLMEDNFV 655
Query: 472 TC-MVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
C ++D+ +++G LG + ++ + W ++ G HG
Sbjct: 656 ACSLMDMYAKSGFLGHSQRIFNRLN-GKEVASWNVMITGFGVHGQ 699
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 122/469 (26%), Positives = 210/469 (44%), Gaps = 64/469 (13%)
Query: 4 KCGSLDDAKKVFKMMPERDCVSWN---------SVVTACAANGLVLEALECLERMSSLDN 54
KCG + + + + + E CVS ++T + G LE+ +R+ +
Sbjct: 116 KCGQYKNVE-IGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLN--- 171
Query: 55 ETPNLVSWSAVIGGFTQNGYDEEAIGMLFRM-QAEGLEPNARTLSSVLPACARLQKLSLG 113
NL W+A++ G+ +N +EAI + +P+ T ++ AC + LG
Sbjct: 172 --KNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLG 229
Query: 114 KEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCEN 173
K HG + G + + FV N ++ +Y +CG +
Sbjct: 230 KSVHGMAVKMGLIMDLFVGNAMIALYGKCGFL---------------------------- 261
Query: 174 GNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMR-DGIEPTSF 232
EA ELFD+M ++ +ISWNS+I G+ +N + EA+ FR LL DG+ P
Sbjct: 262 ---DEAVELFDKMP----EQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVA 314
Query: 233 TFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI 292
T ++L C+ ++ G IH +A+ LGL + V AL++MY + L A + F +I
Sbjct: 315 TMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKI 374
Query: 293 EN-----IENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGII--LSACSSL 345
EN +++G +GF + L +M + ++ V I+ L AC
Sbjct: 375 ENKSVVSWNSMIGAYSREGF-----VFETFDLLRKMWMEEELMEVNEVTILNLLPACLEE 429
Query: 346 ATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAML 405
+ + + +H Y++R + I A + YAKCGSL A + ++T + S NA++
Sbjct: 430 SELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVI 489
Query: 406 TAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSE 454
+A +G + + + + G PD S +S L AC G ++ G E
Sbjct: 490 GGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKE 538
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 107/389 (27%), Positives = 185/389 (47%), Gaps = 23/389 (5%)
Query: 136 VDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGI 195
V++ R+ +ML FS + N +I Y G E+R +FD++ + + +
Sbjct: 123 VEIGRKLDEMLCVSSQFSGDFVLN----TRLITMYSICGYPLESRLVFDRL----LNKNL 174
Query: 196 ISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHA 255
WN+++SGYV N LYDEA F +L+ +P +FTF ++ AC + GK +H
Sbjct: 175 FQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHG 234
Query: 256 LAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWN 315
+A+ +GL D FVG A++ +Y + L A FD++ + GF N +
Sbjct: 235 MAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLE 294
Query: 316 AMQLFSEMLSL--DLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTAL 373
A + F +L L PD+ T+ +L CS ++ G +H A++ G ++ + AL
Sbjct: 295 AYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNAL 354
Query: 374 VDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASG--FRP 431
+DMY+KCG L A + +++I +VS N+M+ AY+ G E R++
Sbjct: 355 IDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEV 414
Query: 432 DHISFLSALSACVHAGSIKTGSEFFDLMAY--YDVKPSLKHYTCMVDLLSRAGELGEAYE 489
+ ++ L+ L AC+ SE L A Y ++ S ++ + + A +
Sbjct: 415 NEVTILNLLPACLEE------SELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLV 468
Query: 490 FIKKI--PMAPDSV-MWGALLGGCVSHGN 515
F + + M SV W A++GG +G+
Sbjct: 469 FAEHVFFGMNTKSVSSWNAVIGGHAQNGD 497
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 104/387 (26%), Positives = 155/387 (40%), Gaps = 75/387 (19%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y KCGSL A+ VF M + SWN+V+ A NG ++AL+
Sbjct: 461 YAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALD----------------- 503
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
F M G+ P+ ++ S+L AC RL L GKE HG++
Sbjct: 504 -------------------FYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVL 544
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
RNG N FV L+ +Y C F KN V N ++ GY +N EA
Sbjct: 545 RNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFETMGDKNSVCWNAMLSGYSQNELPNEALS 604
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
LF QM + DG+EP S+L AC
Sbjct: 605 LFRQM------------------------------------LSDGLEPDEIAIASILGAC 628
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK 301
+ +++L GKE+H A+ L D FV +L++MY + L +Q F+ + E
Sbjct: 629 SQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWN 688
Query: 302 MKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRC 361
+ GF + A++LF +M D PD +T +L AC + G A ++
Sbjct: 689 VMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEGLNYLA-QMQT 747
Query: 362 GY--DSDVHIGTALVDMYAKCGSLKHA 386
Y + ++ ++DM + G L A
Sbjct: 748 LYKLEPELEHYACVIDMLGRAGRLNEA 774
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 90/241 (37%), Gaps = 38/241 (15%)
Query: 327 DLTPDIYTVGIILSACSSLATMERGKQV-HAYAIRCGYDSDVHIGTALVDMYAKCGSLKH 385
DL +G++L C +E G+++ + + D + T L+ MY+ CG
Sbjct: 102 DLAQRKEAMGMLLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLE 161
Query: 386 ARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILA-SGFRPDHISFLSALSACV 444
+RL + R+ +L NA+++ Y + E I F +++ + F+PD+ +F + AC
Sbjct: 162 SRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACT 221
Query: 445 HAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIP--------- 495
I G + + L M+ L + G L EA E K+P
Sbjct: 222 GKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNS 281
Query: 496 ---------------------------MAPDSVMWGALLGGCVSHGNLEFGQIAADRLIE 528
+ PD LL C GN++ G + ++
Sbjct: 282 LIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVK 341
Query: 529 L 529
L
Sbjct: 342 L 342
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 53/117 (45%), Gaps = 2/117 (1%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G L ++++F + ++ SWN ++T +G +A+E E M D + P+
Sbjct: 662 MYAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQ-PDRF 720
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQA-EGLEPNARTLSSVLPACARLQKLSLGKEF 116
++ V+ G E + L +MQ LEP + V+ R +L+ F
Sbjct: 721 TFLGVLQACCHAGLVSEGLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNF 777
>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
Length = 660
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 180/565 (31%), Positives = 293/565 (51%), Gaps = 69/565 (12%)
Query: 54 NETPNLVSWS--AVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLS 111
++ PN S++ ++I G T +EA+ M +GL P+ T S+ +C + S
Sbjct: 46 SQIPNPTSYTCNSIIRGCTDKNLHQEALLFYQEMMVQGLIPDRYTFPSLFKSC---RNSS 102
Query: 112 LGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYC 171
GK+ H + T+ GF S+ + N L+++Y CG ++SA
Sbjct: 103 EGKQIHCHSTKLGFASDTYAQNTLMNMYSNCGCLVSA----------------------- 139
Query: 172 ENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTS 231
R++FD+ME + ++SW +MI + +EA +F ++ + ++P
Sbjct: 140 --------RKVFDKME----DKTVVSWATMIGVHAQWDQPNEAVRLFDRMMKSENVKPNE 187
Query: 232 FTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDE 291
T +VL ACA L K IH G + L+++YC+ + A+ FD+
Sbjct: 188 VTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCVQLARDLFDK 247
Query: 292 IENIENLLGKMKEDGFEPNVYTWN--------------AMQLFSEMLSLDLTPDIYTVGI 337
+ E N+++WN A+ LF EM + + D T+
Sbjct: 248 AQ--------------EKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMAS 293
Query: 338 ILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPD 397
+L AC+ L +E GK +HAY + D DV +GTALVDMYAKCGS++ A + + D
Sbjct: 294 LLLACTHLGALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPEKD 353
Query: 398 LVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFD 457
+++ A++ AM G + + +F + G +PD I+F+ L+AC HAG + G F+
Sbjct: 354 VMTWTALILGLAMCGQAENALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEGISHFN 413
Query: 458 LMA-YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNL 516
M+ Y ++P+++HY +VD+L RAG + EA E IK +PMAPD + G LLG C HGNL
Sbjct: 414 SMSDTYGIQPTIEHYGGLVDILGRAGRIAEAEELIKSMPMAPDQFVLGGLLGACRIHGNL 473
Query: 517 EFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIED 576
E + AA +L+E++P ++G YV+L+N++ + +W + RTR+ M +R M K PGCS IE
Sbjct: 474 EAAERAAKQLLEIDPYHSGTYVLLSNIYKSSKKWEEAKRTRELMAERGMRKPPGCSQIEV 533
Query: 577 RDEIHKFRASDRSHDRSEEIYTIID 601
+H+F D SH +S EI +++
Sbjct: 534 HGVVHEFVKGDSSHRQSSEINEMLE 558
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/360 (26%), Positives = 182/360 (50%), Gaps = 23/360 (6%)
Query: 167 IVGYC---ENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLM 223
IV +C E+G++ AR +F Q+ + + NS+I G D +L+ EA ++++++
Sbjct: 26 IVAFCSLQESGSLQYARLVFSQIPN----PTSYTCNSIIRGCTDKNLHQEALLFYQEMMV 81
Query: 224 RDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLV 283
+ G+ P +TF S+ +C + + +GK+IH + LG SDT+ L+ MY LV
Sbjct: 82 Q-GLIPDRYTFPSLFKSCRNSS---EGKQIHCHSTKLGFASDTYAQNTLMNMYSNCGCLV 137
Query: 284 AAQMAFDEIENIE-----NLLGKMKEDGFEPNVYTWNAMQLFSEML-SLDLTPDIYTVGI 337
+A+ FD++E+ ++G + +PN A++LF M+ S ++ P+ T+
Sbjct: 138 SARKVFDKMEDKTVVSWATMIG-VHAQWDQPN----EAVRLFDRMMKSENVKPNEVTLVN 192
Query: 338 ILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPD 397
+L+AC+ + K++H Y G+ V + T L+D+Y KCG ++ AR + + +
Sbjct: 193 VLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCVQLARDLFDKAQEKN 252
Query: 398 LVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFD 457
L S N M+ + + +E + FR + G + D ++ S L AC H G+++ G
Sbjct: 253 LFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLACTHLGALELGKWLHA 312
Query: 458 LMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
+ + + T +VD+ ++ G + A + ++P D + W AL+ G G E
Sbjct: 313 YIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMP-EKDVMTWTALILGLAMCGQAE 371
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 112/434 (25%), Positives = 184/434 (42%), Gaps = 76/434 (17%)
Query: 1 MYGKCGSLDDAKKVF----KMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNET 56
++ C + + K++ K+ D + N+++ + G ++ A + ++M E
Sbjct: 94 LFKSCRNSSEGKQIHCHSTKLGFASDTYAQNTLMNMYSNCGCLVSARKVFDKM-----ED 148
Query: 57 PNLVSWSAVIGGFTQNGYDEEAIGMLFRM-QAEGLEPNARTLSSVLPACARLQKLSLGKE 115
+VSW+ +IG Q EA+ + RM ++E ++PN TL +VL ACAR + L++ K
Sbjct: 149 KTVVSWATMIGVHAQWDQPNEAVRLFDRMMKSENVKPNEVTLVNVLTACARARDLAMVKR 208
Query: 116 FHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGN 175
H YI +GF + + L+DVY +CG + A +F K KN S N +I G+ E+ N
Sbjct: 209 IHEYIDEHGFGRHVVLNTVLMDVYCKCGCVQLARDLFDKAQEKNLFSWNIMINGHVEDSN 268
Query: 176 VAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFG 235
EA LF +M+ GI+ T
Sbjct: 269 YEEALLLFREMQ------------------------------------TKGIKGDKVTMA 292
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
S+L+AC + +L GK +HA + D +G ALV+MY + + A F E+
Sbjct: 293 SLLLACTHLGALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMP-- 350
Query: 296 ENLLGKMKEDGFEPNVYTW--------------NAMQLFSEMLSLDLTPDIYTVGIILSA 341
E +V TW NA+Q F EM + PD T +L+A
Sbjct: 351 ------------EKDVMTWTALILGLAMCGQAENALQYFDEMHIKGVKPDAITFVGVLAA 398
Query: 342 CSSLATMERG-KQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLV 399
CS ++ G ++ + G + LVD+ + G + A K + PD
Sbjct: 399 CSHAGFVDEGISHFNSMSDTYGIQPTIEHYGGLVDILGRAGRIAEAEELIKSMPMAPDQF 458
Query: 400 SQNAMLTAYAMHGH 413
+L A +HG+
Sbjct: 459 VLGGLLGACRIHGN 472
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 119/271 (43%), Gaps = 9/271 (3%)
Query: 251 KEIHALAIALGLQSDTFVGGALVEMYCRYQD---LVAAQMAFDEIENIENLLGKMKEDGF 307
K+IHA + GL D F +V +C Q+ L A++ F +I N + G
Sbjct: 5 KQIHAQMLRTGLFFDPFTASKIVA-FCSLQESGSLQYARLVFSQIPNPTSYTCNSIIRGC 63
Query: 308 EPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDV 367
A+ + EM+ L PD YT + +C + + GKQ+H ++ + G+ SD
Sbjct: 64 TDKNLHQEALLFYQEMMVQGLIPDRYTFPSLFKSCRNSS---EGKQIHCHSTKLGFASDT 120
Query: 368 HIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILAS 427
+ L++MY+ CG L AR + ++ +VS M+ +A E + F R++ S
Sbjct: 121 YAQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRMMKS 180
Query: 428 -GFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGE 486
+P+ ++ ++ L+AC A + + + + + T ++D+ + G +
Sbjct: 181 ENVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCVQL 240
Query: 487 AYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
A + K + W ++ G V N E
Sbjct: 241 ARDLFDK-AQEKNLFSWNIMINGHVEDSNYE 270
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 71/149 (47%), Gaps = 5/149 (3%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGS++ A +VF MPE+D ++W +++ A G AL+ + M + P+ +
Sbjct: 332 MYAKCGSIETAIQVFHEMPEKDVMTWTALILGLAMCGQAENALQYFDEM-HIKGVKPDAI 390
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQ-AEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
++ V+ + G+ +E I M G++P ++ R +++ +E
Sbjct: 391 TFVGVLAACSHAGFVDEGISHFNSMSDTYGIQPTIEHYGGLVDILGRAGRIAEAEEL--- 447
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSA 148
I + FV+ GL+ R G++ +A
Sbjct: 448 IKSMPMAPDQFVLGGLLGACRIHGNLEAA 476
>gi|224120114|ref|XP_002318245.1| predicted protein [Populus trichocarpa]
gi|222858918|gb|EEE96465.1| predicted protein [Populus trichocarpa]
Length = 513
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 178/541 (32%), Positives = 282/541 (52%), Gaps = 41/541 (7%)
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
++A++ G+ + A + R+ +G P+ T +VL +CA+ + G++ HG I
Sbjct: 2 FNALVSGYAIGDRPKTAFLVYRRIVKDGFLPDMFTFPAVLKSCAKFVGIGEGRQVHGVII 61
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
+ GF+ N +V N LV Y C +F +A
Sbjct: 62 KMGFVCNIYVENSLVHFYSVC----------KRF---------------------GDASR 90
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
+FD+M + R ++SW +ISGYV L+DEA +F +R +EP + TF SVL+AC
Sbjct: 91 VFDEM----LVRDVVSWTGVISGYVRAGLFDEAVGLF----LRMDVEPNAATFVSVLVAC 142
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK 301
L GK IH L+ V AL++MY + L A+ FDE+ + +
Sbjct: 143 GRKGYLSVGKGIHGLSFKSAFGVGLEVSNALMDMYVKCGCLPGAKQVFDELAEKDIVSWT 202
Query: 302 MKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRC 361
G A++LF +M S + PD + +LSAC+ L ++ G+ VH + R
Sbjct: 203 SIISGLVQCNCPKEALELFQDMQSSGIEPDGIILTSVLSACARLGALDYGRWVHEHIDRK 262
Query: 362 GYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHF 421
D+ IGTA+VDMYAKCG ++ + + + ++++ NA+L AMHGH + + F
Sbjct: 263 AIKWDIQIGTAMVDMYAKCGCIEMSMQIFNGMPHKNVLTWNALLNGLAMHGHAYKVLELF 322
Query: 422 RRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA--YYDVKPSLKHYTCMVDLLS 479
++ G RP+ ++FL+ L+AC H G + G ++F+ M Y++ P L+HY CMVDLL
Sbjct: 323 EEMVRVGMRPNEVTFLAILTACCHCGLVNEGRQYFNWMKGQQYNLPPRLEHYGCMVDLLC 382
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
RA L EA E K +PM+PD + GALL C +GN E Q DR +EL+ +++G YV+
Sbjct: 383 RARLLDEALELTKAMPMSPDVRIMGALLSACKENGNTELPQEILDRFVELDSHDSGVYVL 442
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTI 599
L+N+ A RW D+ R R+ MK++ + K PG + IE + H+F D H + + I +
Sbjct: 443 LSNIHAINQRWDDVTRIRRLMKEKGIKKPPGSTVIELDGKAHEFIVGDTRHPQDKRIRLL 502
Query: 600 I 600
+
Sbjct: 503 L 503
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 107/416 (25%), Positives = 171/416 (41%), Gaps = 80/416 (19%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y C DA +VF M RD VSW V++
Sbjct: 79 YSVCKRFGDASRVFDEMLVRDVVSWTGVIS------------------------------ 108
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
G+ + G +EA+G+ RM +EPNA T SVL AC R LS+GK HG
Sbjct: 109 ------GYVRAGLFDEAVGLFLRMD---VEPNAATFVSVLVACGRKGYLSVGKGIHGLSF 159
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
++ F V N L+D+Y +CG + A ++F + + K+ VS +II G + EA E
Sbjct: 160 KSAFGVGLEVSNALMDMYVKCGCLPGAKQVFDELAEKDIVSWTSIISGLVQCNCPKEALE 219
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
LF M+ GIEP SVL AC
Sbjct: 220 LFQDMQ------------------------------------SSGIEPDGIILTSVLSAC 243
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK 301
A + +L G+ +H ++ D +G A+V+MY + + + F+ + + L
Sbjct: 244 ARLGALDYGRWVHEHIDRKAIKWDIQIGTAMVDMYAKCGCIEMSMQIFNGMPHKNVLTWN 303
Query: 302 MKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRC 361
+G + + + ++LF EM+ + + P+ T IL+AC + G+Q +
Sbjct: 304 ALLNGLAMHGHAYKVLELFEEMVRVGMRPNEVTFLAILTACCHCGLVNEGRQYFNWMKGQ 363
Query: 362 GYDSDV---HIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNAMLTAYAMHGH 413
Y+ H G +VD+ + L A K + +PD+ A+L+A +G+
Sbjct: 364 QYNLPPRLEHYG-CMVDLLCRARLLDEALELTKAMPMSPDVRIMGALLSACKENGN 418
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 105/218 (48%), Gaps = 36/218 (16%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG L AK+VF + E+D +V
Sbjct: 176 MYVKCGCLPGAKQVFDELAEKD------------------------------------IV 199
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+++I G Q +EA+ + MQ+ G+EP+ L+SVL ACARL L G+ H +I
Sbjct: 200 SWTSIISGLVQCNCPKEALELFQDMQSSGIEPDGIILTSVLSACARLGALDYGRWVHEHI 259
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R + + +VD+Y +CG + +++IF+ KN ++ N ++ G +G+ +
Sbjct: 260 DRKAIKWDIQIGTAMVDMYAKCGCIEMSMQIFNGMPHKNVLTWNALLNGLAMHGHAYKVL 319
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMF 218
ELF++M +G++ +++ ++++ L +E F
Sbjct: 320 ELFEEMVRVGMRPNEVTFLAILTACCHCGLVNEGRQYF 357
>gi|225433177|ref|XP_002281549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130 [Vitis vinifera]
gi|296083673|emb|CBI23662.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 181/603 (30%), Positives = 292/603 (48%), Gaps = 75/603 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKC +D A VF M ER N+V
Sbjct: 48 MYGKCSRVDLACSVFDRMLER------------------------------------NVV 71
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A++ G+ Q G + ++ +L M G++PN T S+ L AC L + G + HG
Sbjct: 72 SWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGMQIHGMC 131
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
++GF V N +D+Y +CG + A ++F+K
Sbjct: 132 VKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPF----------------------- 168
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
R ++SWN+MI+G+ ++ +F+ + G P FTF S L A
Sbjct: 169 ------------RNLVSWNAMIAGHTHEGNGRKSLVLFQRM-QGQGEVPDEFTFTSTLKA 215
Query: 241 CADMNSLRKGKEIHALAIALG--LQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
C + ++R G +IHA I G + + A+V++Y + L AQ FD IE +
Sbjct: 216 CGALGAIRGGTQIHASLITRGFPISIRNIIASAIVDLYAKCGYLFEAQKVFDRIEQKNLI 275
Query: 299 LGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYA 358
GF AM LF ++ D + + I++ + LA +E+GKQ+H Y
Sbjct: 276 SWSALIQGFAQEGNLLEAMDLFRQLRESVSNVDGFVLSIMMGVFADLALVEQGKQMHCYI 335
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGI 418
++ D+ + +++DMY KCG + A + + ++VS M+T Y HG G++ I
Sbjct: 336 LKVPSGLDISVANSIIDMYLKCGLTEEAERLFSEMQVRNVVSWTVMITGYGKHGLGEKAI 395
Query: 419 AHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFD-LMAYYDVKPSLKHYTCMVDL 477
F R+ G D +++L+ LSAC H+G I+ E+F L + +KP+++HY CMVD+
Sbjct: 396 HLFNRMQLDGIELDEVAYLALLSACSHSGLIRESQEYFSRLCNNHQMKPNIEHYACMVDI 455
Query: 478 LSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNY 537
L RAG+L EA I+ + + P+ +W LL C HGNLE G+ + L ++ +N NY
Sbjct: 456 LGRAGQLKEAKNLIENMKLKPNEGIWQTLLSACRVHGNLEIGREVGEILFRMDTDNPVNY 515
Query: 538 VMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
VM++N++A AG W + R R+ +K + + K G SW+E EIH F D +H +E+I+
Sbjct: 516 VMMSNIYAEAGYWKECERVRKLVKAKGLKKEAGQSWVEINKEIHFFYGGDDTHPLTEKIH 575
Query: 598 TII 600
++
Sbjct: 576 EML 578
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 138/299 (46%), Gaps = 31/299 (10%)
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
+L C+ +G ++HA A+ +G D + L++MY + + A FD +
Sbjct: 7 LAKLLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRM- 65
Query: 294 NIENLLGKMKEDGFEPNVYTWNAMQ--------------LFSEMLSLDLTPDIYTVGIIL 339
E NV +W A+ L EM + P+ +T L
Sbjct: 66 -------------LERNVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSL 112
Query: 340 SACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLV 399
AC +L +E G Q+H ++ G++ +G A +DMY+KCG + A + ++ +LV
Sbjct: 113 KACGALGVVENGMQIHGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLV 172
Query: 400 SQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM 459
S NAM+ + G+G++ + F+R+ G PD +F S L AC G+I+ G++ +
Sbjct: 173 SWNAMIAGHTHEGNGRKSLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASL 232
Query: 460 AYYDVKPSLKHY--TCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNL 516
S+++ + +VDL ++ G L EA + +I + + W AL+ G GNL
Sbjct: 233 ITRGFPISIRNIIASAIVDLYAKCGYLFEAQKVFDRIEQ-KNLISWSALIQGFAQEGNL 290
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/436 (21%), Positives = 182/436 (41%), Gaps = 67/436 (15%)
Query: 95 RTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSK 154
+ L+ +L C++ G + H GF + + N L+D+Y +C +
Sbjct: 5 QRLAKLLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRV--------- 55
Query: 155 FSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEA 214
+++C+ +FD+M ++R ++SW +++ GY+ +
Sbjct: 56 -----DLACS-----------------VFDRM----LERNVVSWTALMCGYLQEGNAKGS 89
Query: 215 FSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVE 274
++ ++ G++P FTF + L AC + + G +IH + + G + + VG A ++
Sbjct: 90 LALLCEM-GYSGVKPNEFTFSTSLKACGALGVVENGMQIHGMCVKSGFEWVSVVGNATID 148
Query: 275 MYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAM--------------QLF 320
MY + + A+ F+++ N+ +WNAM LF
Sbjct: 149 MYSKCGRIGMAEQVFNKMPF--------------RNLVSWNAMIAGHTHEGNGRKSLVLF 194
Query: 321 SEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVH--IGTALVDMYA 378
M PD +T L AC +L + G Q+HA I G+ + I +A+VD+YA
Sbjct: 195 QRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRNIIASAIVDLYA 254
Query: 379 KCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLS 438
KCG L A+ + RI +L+S +A++ +A G+ E + FR++ S D
Sbjct: 255 KCGYLFEAQKVFDRIEQKNLISWSALIQGFAQEGNLLEAMDLFRQLRESVSNVDGFVLSI 314
Query: 439 ALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAP 498
+ ++ G + + + ++D+ + G EA ++ +
Sbjct: 315 MMGVFADLALVEQGKQMHCYILKVPSGLDISVANSIIDMYLKCGLTEEAERLFSEMQV-R 373
Query: 499 DSVMWGALLGGCVSHG 514
+ V W ++ G HG
Sbjct: 374 NVVSWTVMITGYGKHG 389
>gi|225441775|ref|XP_002277828.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Vitis vinifera]
Length = 773
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 192/611 (31%), Positives = 311/611 (50%), Gaps = 92/611 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +CG L A+KV+ + +D + CL M
Sbjct: 223 MYSRCGDLGAAEKVYSNLAYKD--------------------VRCLNFM----------- 251
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
I + + G E+AIG+ + GLEPN T ++V+ AC + + + HG
Sbjct: 252 -----ISEYGKAGCGEKAIGVFLHLLGSGLEPNDYTFTNVISACNGDIDVEVLRVLHGMC 306
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G CGD +S N I+ Y ++G + EA
Sbjct: 307 IKCG-----------------CGDEISV--------------GNAIVSVYVKHGMLEEAE 335
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+ F M +R ++SW +++SGYV N +A F +L G+ S F ++L
Sbjct: 336 KSFCGMG----ERNLVSWTALLSGYVKNGNGKKALEGFSQIL-ELGVGFDSCCFATLLDG 390
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI--ENIENL 298
C++ +L G +IH + LG D VG AL+++Y + + L +A++ F + +NI +
Sbjct: 391 CSECKNLGLGLQIHGFVVKLGYVHDVSVGTALIDLYAKCRKLRSARLVFHSLLDKNIVSF 450
Query: 299 -------LGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG 351
+G +ED AM LFS++ D+ PD T +LS + A + +G
Sbjct: 451 NAILSGYIGADEED----------AMALFSQLRLADIKPDSVTFARLLSLSADQACLVKG 500
Query: 352 KQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMH 411
K +HAY I+ G++++ +G A++ MYAKCGS+ A + ++ D +S NA+++AYA+H
Sbjct: 501 KCLHAYIIKTGFEANPSVGNAVITMYAKCGSIGDACQLFYSMNYLDSISWNAVISAYALH 560
Query: 412 GHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFF-DLMAYYDVKPSLKH 470
G G++ + F + F PD I+ LS L AC ++G ++ G F D+ + Y +KP ++H
Sbjct: 561 GQGRKALILFEEMKKEEFVPDEITILSVLQACSYSGLLEEGFCLFNDMESKYGIKPEIEH 620
Query: 471 YTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELE 530
+ CMVDLL RAG L EA FI + P + ++W L+ C HG+L FGQIA+ L++L
Sbjct: 621 FACMVDLLGRAGYLSEAMSFINRSPFSGSPLLWRTLVHVCKLHGDLNFGQIASKHLLDLA 680
Query: 531 PNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSH 590
P G+Y++++NL+A G ++ AR R M D ++ K G SWIE +++H+F ASD+ H
Sbjct: 681 PEEAGSYILVSNLYAGGGMLNEAARVRTVMNDLKVSKEAGSSWIEIDNKVHQFVASDKDH 740
Query: 591 DRSEEIYTIID 601
S+EIY +D
Sbjct: 741 PESKEIYAKLD 751
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 104/434 (23%), Positives = 201/434 (46%), Gaps = 54/434 (12%)
Query: 110 LSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVG 169
L LG+ H ++ + G+ ++ F N LV++Y + F+K
Sbjct: 94 LMLGQAIHAFLAKLGYQNDAFRGNNLVNLYGK----------FNK--------------- 128
Query: 170 YCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEP 229
+ +A+ +FD+M + R I+W ++I G++ + + F + R++ G E
Sbjct: 129 ------LGDAQSVFDEM----LVRNTITWTTLIKGHLQVNDVESVFRIAREMYWV-GEEF 177
Query: 230 TSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQ--- 286
T +L AC + +L +G++IH I G D FVG +L+ MY R DL AA+
Sbjct: 178 NEHTCSVILQACDSLENLVRGEQIHGFVIKRGFDEDVFVGTSLISMYSRCGDLGAAEKVY 237
Query: 287 --MAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSS 344
+A+ ++ + ++ + + G A+ +F +L L P+ YT ++SAC+
Sbjct: 238 SNLAYKDVRCLNFMISEYGKAGCGE-----KAIGVFLHLLGSGLEPNDYTFTNVISACNG 292
Query: 345 LATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAM 404
+E + +H I+CG ++ +G A+V +Y K G L+ A ++ + +LVS A+
Sbjct: 293 DIDVEVLRVLHGMCIKCGCGDEISVGNAIVSVYVKHGMLEEAEKSFCGMGERNLVSWTAL 352
Query: 405 LTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDV 464
L+ Y +G+GK+ + F +IL G D F + L C ++ G + +
Sbjct: 353 LSGYVKNGNGKKALEGFSQILELGVGFDSCCFATLLDGCSECKNLGLGLQIHGFVVKLGY 412
Query: 465 KPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE----FGQ 520
+ T ++DL ++ +L A + + + V + A+L G + + F Q
Sbjct: 413 VHDVSVGTALIDLYAKCRKLRSARLVFHSL-LDKNIVSFNAILSGYIGADEEDAMALFSQ 471
Query: 521 IAADRLIELEPNNT 534
+ RL +++P++
Sbjct: 472 L---RLADIKPDSV 482
>gi|20146226|dbj|BAB89008.1| PPR repeat protein-like [Oryza sativa Japonica Group]
gi|125573391|gb|EAZ14906.1| hypothetical protein OsJ_04836 [Oryza sativa Japonica Group]
Length = 785
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 182/604 (30%), Positives = 300/604 (49%), Gaps = 69/604 (11%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG + +A++VF + ERD V
Sbjct: 153 MYSKCGEMGEARRVFDVAEERD------------------------------------DV 176
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQ--KLSLGKEFHG 118
SW++++ G+ + G EE + + M+ G+ N+ L SV+ C+ + + + HG
Sbjct: 177 SWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDGTMDIAEAVHG 236
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
+ + G S+ F+V+ ++D+Y + G ++ A +F N V NT+I G+C V
Sbjct: 237 CVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETV-- 294
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
+ + EA +++ ++ R G++PT FTF SVL
Sbjct: 295 ---------------------------IGKEVASEALTLYSEVQSR-GMQPTEFTFSSVL 326
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
AC L GK+IH I Q D F+G AL+++Y + F + +
Sbjct: 327 RACNLAGYLEFGKQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIV 386
Query: 299 LGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYA 358
G N A+ LF E L L PD++T+ +++AC+SLA G+Q+ +A
Sbjct: 387 TWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFA 446
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGI 418
+ G+D +G + V MYA+ G + A ++ + + D+VS +A+++ +A HG ++ +
Sbjct: 447 TKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDAL 506
Query: 419 AHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDL 477
F ++ + P+ I+FL L+AC H G + G +++ M Y + P++KH TC+VDL
Sbjct: 507 HFFDEMVDAKVVPNEITFLGVLTACSHGGLVDEGLRYYETMTKDYGLSPTIKHCTCVVDL 566
Query: 478 LSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNY 537
L RAG L +A FI D V+W +LL C H +LE GQ+ A+R++ELEP ++ +Y
Sbjct: 567 LGRAGRLADAEAFISNSIFHADPVIWRSLLASCRIHRDLERGQLVANRIMELEPTSSASY 626
Query: 538 VMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
V+L N++ AG S ++TR MK R + K PG SWIE + +H F A D+SH S IY
Sbjct: 627 VILYNMYLDAGELSLASKTRDLMKQRGVKKEPGLSWIELKCGVHSFVAGDKSHPESSAIY 686
Query: 598 TIID 601
T ++
Sbjct: 687 TKLE 690
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 121/491 (24%), Positives = 216/491 (43%), Gaps = 83/491 (16%)
Query: 52 LDNETP--NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQK 109
L +E P N VS++ +I +++ G ++ L R + G++ + + ++ L AC+R
Sbjct: 65 LLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARRAGVDVDRFSYAAALAACSRAGH 124
Query: 110 LSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVG 169
L G+ H +G S FV N LV +Y +CG+M A ++F +++VS N+++ G
Sbjct: 125 LRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRVFDVAEERDDVSWNSLVSG 184
Query: 170 YCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEP 229
Y G ARE M+ F+M R R G+
Sbjct: 185 YVRAG----ARE------------------EMV----------RVFAMMR----RGGMGL 208
Query: 230 TSFTFGSVLIACADM--NSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQM 287
SF GSV+ C+ ++ + +H I GL SD F+ A+++MY + LV A
Sbjct: 209 NSFALGSVIKCCSGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAA 268
Query: 288 AFDEIENIENLLGKMKEDGFEPNVYTWN--------------------AMQLFSEMLSLD 327
F ++ EPNV +N A+ L+SE+ S
Sbjct: 269 LFRSVQ--------------EPNVVMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRG 314
Query: 328 LTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHAR 387
+ P +T +L AC+ +E GKQ+H I+ + D IG+AL+D+Y G ++
Sbjct: 315 MQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGF 374
Query: 388 LAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAG 447
++ D+V+ AM++ + ++ ++ F L +G +PD + S ++AC
Sbjct: 375 RCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMNACASLA 434
Query: 448 SIKTGSEFFDLMAYYDVKPSLKHYTCM----VDLLSRAGELGEAYEFIKKIPMAPDSVMW 503
+ G + + + K +T M V + +R+G++ A +++ + D V W
Sbjct: 435 VARAGEQ----IQCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQEME-SHDVVSW 489
Query: 504 GALLGGCVSHG 514
A++ HG
Sbjct: 490 SAVISCHAQHG 500
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 106/258 (41%), Gaps = 29/258 (11%)
Query: 267 FVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSL 326
F+ L+ YCR + A+ DE+ + + D + +++ +
Sbjct: 44 FLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARRA 103
Query: 327 DLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHA 386
+ D ++ L+ACS + G+ VHA AI G S V + +LV MY+KCG + A
Sbjct: 104 GVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEA 163
Query: 387 RLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSAC--- 443
R + D VS N++++ Y G +E + F + G + + S + C
Sbjct: 164 RRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGR 223
Query: 444 ----------VHAGSIKTG--SEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFI 491
VH IK G S+ F + A M+D+ ++ G L EA
Sbjct: 224 GDGTMDIAEAVHGCVIKAGLDSDVFLVSA-------------MIDMYAKKGALVEAAALF 270
Query: 492 KKIPMAPDSVMWGALLGG 509
+ + P+ VM+ ++ G
Sbjct: 271 RSV-QEPNVVMFNTMIAG 287
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 62/145 (42%), Gaps = 1/145 (0%)
Query: 373 LVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPD 432
L+ Y + G AR + + VS N ++ AY+ G + R +G D
Sbjct: 49 LLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARRAGVDVD 108
Query: 433 HISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIK 492
S+ +AL+AC AG ++ G L + + +V + S+ GE+GEA +
Sbjct: 109 RFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARR-VF 167
Query: 493 KIPMAPDSVMWGALLGGCVSHGNLE 517
+ D V W +L+ G V G E
Sbjct: 168 DVAEERDDVSWNSLVSGYVRAGARE 192
>gi|357166812|ref|XP_003580863.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130-like [Brachypodium distachyon]
Length = 707
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 189/610 (30%), Positives = 297/610 (48%), Gaps = 81/610 (13%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG L A +VF MPER N+V
Sbjct: 48 MYAKCGELRMAGEVFGGMPER------------------------------------NVV 71
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQA-EGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
SW+A++ GF ++G E + +L M++ + PN TLS+ L AC + ++ G HG
Sbjct: 72 SWTALMVGFLRHGDARECLRLLGAMRSLSDVAPNEFTLSASLKACGVVGDMAAGVWIHGA 131
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
R GF + V N LV +Y + G + +A
Sbjct: 132 CVRAGFEGHHVVANSLVLLYSK-------------------------------GGRIGDA 160
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMR----DGIEPTSFTFG 235
R +FD V R +++WN+MISGY ++ +FR++ R + +P FTF
Sbjct: 161 RRVFDGT----VFRNLVTWNAMISGYAHAGHGRDSLLVFREMQQRRQEEEDHQPDEFTFA 216
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQ--SDTFVGGALVEMYCRYQDLVAAQM-AFDEI 292
S+L AC + + R+G ++HA + G+ S+ + GAL++MY + + L+ M F+ +
Sbjct: 217 SLLKACGSLGAAREGAQVHAAMVIRGVSTASNAILAGALLDMYVKCRCLLPMAMQVFNRL 276
Query: 293 ENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGK 352
E + G AM+LF S + D + + ++ + A +E+G+
Sbjct: 277 EQKNAIQWTTVIVGHAQEGQVKEAMELFGRFWSSGVRADGHVLSSVVGVFADFALVEQGR 336
Query: 353 QVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHG 412
QVH Y ++ DV + +L+DMY KCG A ++ + ++VS AM+ HG
Sbjct: 337 QVHCYTVKTPAGLDVSVANSLIDMYHKCGLTDEAARRFREVPARNVVSWTAMINGLGKHG 396
Query: 413 HGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHY 471
HG+E I F + A G PD +++L+ LSAC H+G ++ +F + + ++P +HY
Sbjct: 397 HGQEAIHMFEEMRAEGVEPDEVAYLALLSACSHSGLVEECRRYFSAIRHDRRLRPRAEHY 456
Query: 472 TCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEP 531
CMVDLL RAGEL EA + + +PMAP +W LL C H N+ G+ A + L+ ++
Sbjct: 457 ACMVDLLGRAGELSEAKDLVATMPMAPTVGVWQTLLSACRVHKNVTVGREAGETLLAIDG 516
Query: 532 NNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFR-ASDRSH 590
+N NYVML+N+FA AG W + R R M+ R + K GCSW+E E H F D SH
Sbjct: 517 DNPVNYVMLSNIFAEAGDWRECQRVRGAMRRRGLRKQGGCSWVEVGKEAHFFYGGGDDSH 576
Query: 591 DRSEEIYTII 600
R+ +I ++
Sbjct: 577 PRAADICCVL 586
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 106/485 (21%), Positives = 194/485 (40%), Gaps = 54/485 (11%)
Query: 95 RTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSK 154
+ ++ +L A A + G + HG + + GF S+ + N L+D+Y +CG++ A ++F
Sbjct: 5 KMIADMLRASAASSAIHGGAQLHGALLKLGFGSDTMLGNNLIDMYAKCGELRMAGEVFGG 64
Query: 155 FSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEA 214
+R ++SW +++ G++ + E
Sbjct: 65 MP-----------------------------------ERNVVSWTALMVGFLRHGDAREC 89
Query: 215 FSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVE 274
+ + + P FT + L AC + + G IH + G + V +LV
Sbjct: 90 LRLLGAMRSLSDVAPNEFTLSASLKACGVVGDMAAGVWIHGACVRAGFEGHHVVANSLVL 149
Query: 275 MYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSL-----DLT 329
+Y + + A+ FD + G+ + +++ +F EM D
Sbjct: 150 LYSKGGRIGDARRVFDGTVFRNLVTWNAMISGYAHAGHGRDSLLVFREMQQRRQEEEDHQ 209
Query: 330 PDIYTVGIILSACSSLATMERGKQVHAYAIRCGYD--SDVHIGTALVDMYAKCGS-LKHA 386
PD +T +L AC SL G QVHA + G S+ + AL+DMY KC L A
Sbjct: 210 PDEFTFASLLKACGSLGAAREGAQVHAAMVIRGVSTASNAILAGALLDMYVKCRCLLPMA 269
Query: 387 RLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHA 446
+ R+ + + ++ +A G KE + F R +SG R D S +
Sbjct: 270 MQVFNRLEQKNAIQWTTVIVGHAQEGQVKEAMELFGRFWSSGVRADGHVLSSVVGVFADF 329
Query: 447 GSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGAL 506
++ G + + ++D+ + G EA +++P A + V W A+
Sbjct: 330 ALVEQGRQVHCYTVKTPAGLDVSVANSLIDMYHKCGLTDEAARRFREVP-ARNVVSWTAM 388
Query: 507 LGGCVSHGNLEFGQIAADRLIEL-----EPNNTGNYVMLANLFAYAGRWSDLARTRQKMK 561
+ G HG+ GQ A E+ EP+ Y+ L + +++G + R ++
Sbjct: 389 INGLGKHGH---GQEAIHMFEEMRAEGVEPDEVA-YLALLSACSHSGLVEECRRYFSAIR 444
Query: 562 -DRRM 565
DRR+
Sbjct: 445 HDRRL 449
>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
[Vitis vinifera]
Length = 781
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 191/601 (31%), Positives = 304/601 (50%), Gaps = 73/601 (12%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y K + A+KVF M ERD V WN++V+
Sbjct: 151 YFKFSRVAAARKVFDGMLERDTVLWNTMVS------------------------------ 180
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
G +N +EAI + M G+ ++ T+++VLP A LQ L+LG
Sbjct: 181 ------GLVKNSCFDEAILIFGDMVKGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAM 234
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
+ GF S+ +V+ GL +Y +CG++ +A +F + + VS N +I GY N +
Sbjct: 235 KVGFHSHAYVITGLACLYSKCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVR 294
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
LF ++ ++SG NS ++ G+ P F FG
Sbjct: 295 LFKEL--------------LVSGEKVNS---------SSIV---GLIPVFFPFG------ 322
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK 301
L + IH G+ S++ V AL +Y R ++ +A++ FDE
Sbjct: 323 ----HLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEKSLASWN 378
Query: 302 MKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRC 361
G+ N T A+ LF EM ++ P+ TV ILSAC+ L + GK VH R
Sbjct: 379 AMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVHDLINRE 438
Query: 362 GYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHF 421
++S++ + TAL+DMYAKCGS+ A+ + + + V+ NAM++ Y +HG+G E + F
Sbjct: 439 SFESNIFVSTALIDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISGYGLHGYGHEALNLF 498
Query: 422 RRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSR 480
+L S P ++FLS L AC HAG ++ G E F M + + +P +HY CMVDLL R
Sbjct: 499 NEMLHSRVSPTGVTFLSVLYACSHAGLVREGDEIFRSMVHDHGFEPLPEHYACMVDLLGR 558
Query: 481 AGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVML 540
AG L +A +FI+K+P+ P +WGALLG C+ H + ++A+D+L EL+P N G YV+L
Sbjct: 559 AGNLDKALDFIRKMPVEPGPPVWGALLGACMIHKDANLARLASDKLFELDPQNVGYYVLL 618
Query: 541 ANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTII 600
+N+++ + + A R +K R++ K+PGC+ IE + +H F + D+SH ++ IY ++
Sbjct: 619 SNIYSAGQNYPEAASVRGVVKRRKLAKTPGCTLIEVANTLHIFTSGDQSHPQATAIYAML 678
Query: 601 D 601
+
Sbjct: 679 E 679
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 176/351 (50%), Gaps = 6/351 (1%)
Query: 164 NTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLM 223
+ I+ Y + VA AR++FD M ++R + WN+M+SG V NS +DEA +F D ++
Sbjct: 145 SAIVACYFKFSRVAAARKVFDGM----LERDTVLWNTMVSGLVKNSCFDEAILIFGD-MV 199
Query: 224 RDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLV 283
+ GI S T +VL A++ L G I LA+ +G S +V L +Y + ++
Sbjct: 200 KGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACLYSKCGEIE 259
Query: 284 AAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACS 343
A++ F +I + + G+ N T ++++LF E+L + ++ ++
Sbjct: 260 TARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSIVGLIPVFF 319
Query: 344 SLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNA 403
+ + +H + + G S+ + TAL +Y++ ++ ARL + S L S NA
Sbjct: 320 PFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEKSLASWNA 379
Query: 404 MLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYD 463
M++ YA +G ++ I+ F+ + RP+ ++ S LSAC G++ G DL+
Sbjct: 380 MISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVHDLINRES 439
Query: 464 VKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
+ ++ T ++D+ ++ G + EA +P ++V W A++ G HG
Sbjct: 440 FESNIFVSTALIDMYAKCGSITEAQRLFSMMP-EKNAVTWNAMISGYGLHG 489
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 95/402 (23%), Positives = 174/402 (43%), Gaps = 40/402 (9%)
Query: 198 WNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALA 257
+N +I + N+ A S++ L +EP +FT+ V+ + + A +
Sbjct: 76 YNVLIRAFSLNNSPSSAVSLYTHLRKSTPLEPDNFTYAFVISGASSLGLGLLLH---AHS 132
Query: 258 IALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAM 317
I G SD FVG A+V Y ++ + AA+ FD + + +L G N A+
Sbjct: 133 IVAGFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAI 192
Query: 318 QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMY 377
+F +M+ + D TV +L + L + G + A++ G+ S ++ T L +Y
Sbjct: 193 LIFGDMVKGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACLY 252
Query: 378 AKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFL 437
+KCG ++ ARL + +I PDLVS NAM++ Y + + + F+ +L SG + + S +
Sbjct: 253 SKCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSIV 312
Query: 438 SA-----------LSACVHAGSIKTGS--------------------EFFDLMAYYDVKP 466
L+ C+H K+G E L+ +
Sbjct: 313 GLIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEK 372
Query: 467 SLKHYTCMVDLLSRAGELGEA---YEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAA 523
SL + M+ ++ G +A ++ ++K + P+ V ++L C G L G+
Sbjct: 373 SLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVH 432
Query: 524 DRLIELEPNNTGNYV--MLANLFAYAGRWSDLARTRQKMKDR 563
D LI E + +V L +++A G ++ R M ++
Sbjct: 433 D-LINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMPEK 473
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 105/229 (45%), Gaps = 36/229 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y + ++ A+ +F E+ SWN++++ A NGL +A+ + M +
Sbjct: 352 VYSRLNEIESARLLFDESSEKSLASWNAMISGYAQNGLTEKAISLFQEMQKCE------- 404
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+ PN T++S+L ACA+L LSLGK H I
Sbjct: 405 -----------------------------VRPNPVTVTSILSACAQLGALSLGKWVHDLI 435
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R F SN FV L+D+Y +CG + A ++FS KN V+ N +I GY +G EA
Sbjct: 436 NRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISGYGLHGYGHEAL 495
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEP 229
LF++M H V +++ S++ L E +FR ++ G EP
Sbjct: 496 NLFNEMLHSRVSPTGVTFLSVLYACSHAGLVREGDEIFRSMVHDHGFEP 544
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 112/266 (42%), Gaps = 50/266 (18%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGS+ +A+++F MMPE++ V+WN
Sbjct: 453 MYAKCGSITEAQRLFSMMPEKNAVTWN--------------------------------- 479
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKE-FHGY 119
A+I G+ +GY EA+ + M + P T SVL AC+ + G E F
Sbjct: 480 ---AMISGYGLHGYGHEALNLFNEMLHSRVSPTGVTFLSVLYACSHAGLVREGDEIFRSM 536
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYC---ENGNV 176
+ +GF P +VD+ R G++ AL K ++ ++G C ++ N+
Sbjct: 537 VHDHGFEPLPEHYACMVDLLGRAGNLDKALDFIRKMPVEPGPPVWGALLGACMIHKDANL 596
Query: 177 AEARELFDQMEHLGVQRGIISWNSMISG-YVDNSLYDEAFSMFRDLLMRDGIEPTSFTFG 235
AR D++ L Q + + ++S Y Y EA S+ R ++ R + T G
Sbjct: 597 --ARLASDKLFELDPQN--VGYYVLLSNIYSAGQNYPEAASV-RGVVKRRKLAKTP---G 648
Query: 236 SVLIACAD-MNSLRKGKEIHALAIAL 260
LI A+ ++ G + H A A+
Sbjct: 649 CTLIEVANTLHIFTSGDQSHPQATAI 674
>gi|147780607|emb|CAN69113.1| hypothetical protein VITISV_031840 [Vitis vinifera]
Length = 714
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 160/433 (36%), Positives = 254/433 (58%), Gaps = 5/433 (1%)
Query: 170 YCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEP 229
Y + G +A+ LFD+M + R ++SWNS++SG + F + G +P
Sbjct: 184 YFKLGYDEDAQRLFDEMPN----RDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQP 239
Query: 230 TSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAF 289
T SV+ ACA M +L +GK +H + + LG+ V +L+ MY + L AA F
Sbjct: 240 NEVTLLSVVSACAXMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLF 299
Query: 290 DEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATME 349
+E+ + N Y M LF+ M + PD T+ +L AC+
Sbjct: 300 EEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGR 359
Query: 350 RGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYA 409
+ + +HAY RCG+++D+ I TAL+++YAK G L + ++ I D ++ AML YA
Sbjct: 360 QAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDTIAWTAMLAGYA 419
Query: 410 MHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSL 468
+H G+E I F ++ G DH++F LSAC H+G ++ G ++F++M+ Y V+P L
Sbjct: 420 VHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRL 479
Query: 469 KHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIE 528
HY+CMVDLL R+G L +AYE IK +PM P S +WGALLG C +GN+E G+ A++L+
Sbjct: 480 DHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLS 539
Query: 529 LEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDR 588
L+P++ NY+ML+N+++ AG W ++ R MK+RR+ ++PGCS+IE ++IH+F D+
Sbjct: 540 LDPSDHRNYIMLSNIYSAAGLWRXASKVRXLMKERRLTRNPGCSFIEHGNKIHRFVVGDQ 599
Query: 589 SHDRSEEIYTIID 601
H RS+EI+T ++
Sbjct: 600 LHPRSDEIHTKLE 612
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 108/424 (25%), Positives = 182/424 (42%), Gaps = 82/424 (19%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G +DA+++F MP RD LV
Sbjct: 183 MYFKLGYDEDAQRLFDEMPNRD------------------------------------LV 206
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
SW++++ G + GY + RM+ E G +PN TL SV+ ACA + L GK HG
Sbjct: 207 SWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACAXMGALDEGKSLHGV 266
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ + G VVN L+++Y + G + +A ++F + +++ VS N+++V + NG +
Sbjct: 267 VVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKG 326
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
+LF +L+ R GI P T ++L
Sbjct: 327 MDLF------------------------------------NLMKRAGINPDQATMVALLR 350
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
AC D R+ + IHA G +D + AL+ +Y + L A++ F+EI++ + +
Sbjct: 351 ACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDTIA 410
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGK---QVHA 356
G+ + A++LF M+ + D T +LSACS +E GK ++ +
Sbjct: 411 WTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMS 470
Query: 357 YAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST-PDLVSQNAMLTAYAMHGH-- 413
R D + + +VD+ + G L+ A K + P A+L A ++G+
Sbjct: 471 EVYRVEPRLDHY--SCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVE 528
Query: 414 -GKE 416
GKE
Sbjct: 529 LGKE 532
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 124/280 (44%), Gaps = 2/280 (0%)
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
S++ A + S+ IHA I SD F+G LV MY + AQ FDE+ N
Sbjct: 144 SLVFAISSCTSVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNR 203
Query: 296 ENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLD-LTPDIYTVGIILSACSSLATMERGKQV 354
+ + G Y + F M + P+ T+ ++SAC+ + ++ GK +
Sbjct: 204 DLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACAXMGALDEGKSL 263
Query: 355 HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHG 414
H ++ G + +L++MY K G L A ++ + LVS N+M+ + +G+
Sbjct: 264 HGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYA 323
Query: 415 KEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCM 474
++G+ F + +G PD + ++ L AC G + + + T +
Sbjct: 324 EKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATAL 383
Query: 475 VDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
++L ++ G L + + ++I D++ W A+L G H
Sbjct: 384 LNLYAKLGRLNASEDIFEEIK-DRDTIAWTAMLAGYAVHA 422
>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
Length = 746
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 188/574 (32%), Positives = 296/574 (51%), Gaps = 46/574 (8%)
Query: 28 SVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQA 87
S+V A G V EA + M D + +W+A++ G +N +A+ +L RM
Sbjct: 107 SLVHAYLRFGRVAEAYRVFDEMPERD-----VPAWNAMLSGLCRNTRAADAVTLLGRMVG 161
Query: 88 EGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLS 147
EG+ +A TLSSVLP C L +L H Y ++G FV N L+DVY + G ML+
Sbjct: 162 EGVAGDAVTLSSVLPMCVVLGDRALALVMHVYAVKHGLSGELFVCNALIDVYGKLG-MLT 220
Query: 148 ALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVD 207
EA +F M R +++WNS+IS
Sbjct: 221 ------------------------------EAHWVFGGM----ALRDLVTWNSIISANEQ 246
Query: 208 NSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQ-SDT 266
A +F + M G+ P T S+ A A K +H G D
Sbjct: 247 GGKVAAAVELFHGM-MESGVCPDVLTLVSLASAVAQCGDELGAKSVHCYVRRRGWDVGDI 305
Query: 267 FVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSL 326
G A+V+MY + + AAQ FD + + + + G+ N A++++++M +
Sbjct: 306 IAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLANEAIRIYNDMHNH 365
Query: 327 D-LTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKH 385
+ L P T +L A S L +++G ++HA +I+ G + DV++ T L+D+YAKCG L
Sbjct: 366 EGLKPIQGTFVSVLPAYSYLGGLQQGMRMHALSIKTGLNLDVYVTTCLIDLYAKCGKLVE 425
Query: 386 ARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVH 445
A ++ + NA++ +HGHG + ++ F ++ +PDH++F+S L+AC H
Sbjct: 426 AMFLFEHMPRRSTGPWNAIIAGLGVHGHGAKALSLFSQMQQEEIKPDHVTFVSLLAACSH 485
Query: 446 AGSIKTGSEFFDLM-AYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWG 504
AG + G FFDLM Y + P KHYTCMVD+L RAG+L EA+EFI+ +P+ PDS +WG
Sbjct: 486 AGLVDQGRSFFDLMQTVYGIVPIAKHYTCMVDMLGRAGQLDEAFEFIQSMPIKPDSAVWG 545
Query: 505 ALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRR 564
ALLG C HGN+E G++A+ L EL+P N G YV+++N++A G+W + R ++ +
Sbjct: 546 ALLGACRIHGNVEMGKVASQNLFELDPENVGYYVLMSNMYAKIGKWDGVDAVRSLVRRQN 605
Query: 565 MHKSPGCSWIEDRDEIHKFRASDRS--HDRSEEI 596
+ K+PG S +E + + F + ++ H + EEI
Sbjct: 606 LQKTPGWSSMEVKGSVSVFYSGTQTEPHPQHEEI 639
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 125/487 (25%), Positives = 200/487 (41%), Gaps = 109/487 (22%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y + G + +A +VF MPERD +WN++++
Sbjct: 112 YLRFGRVAEAYRVFDEMPERDVPAWNAMLS------------------------------ 141
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
G +N +A+ +L RM EG+ +A TLSSVLP C L +L H Y
Sbjct: 142 ------GLCRNTRAADAVTLLGRMVGEGVAGDAVTLSSVLPMCVVLGDRALALVMHVYAV 195
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
++G FV N L+DVY + G + A +F ++++ V+ N+II + G VA A E
Sbjct: 196 KHGLSGELFVCNALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSIISANEQGGKVAAAVE 255
Query: 182 LFDQMEHLGV-------------------------------QRG-----IISWNSMISGY 205
LF M GV +RG II+ N+M+ Y
Sbjct: 256 LFHGMMESGVCPDVLTLVSLASAVAQCGDELGAKSVHCYVRRRGWDVGDIIAGNAMVDMY 315
Query: 206 VDNS-------------------------------LYDEAFSMFRDLLMRDGIEPTSFTF 234
S L +EA ++ D+ +G++P TF
Sbjct: 316 AKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLANEAIRIYNDMHNHEGLKPIQGTF 375
Query: 235 GSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIEN 294
SVL A + + L++G +HAL+I GL D +V L+++Y + LV A F+ +
Sbjct: 376 VSVLPAYSYLGGLQQGMRMHALSIKTGLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHMPR 435
Query: 295 IENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV 354
G + + A+ LFS+M ++ PD T +L+ACS +++G+
Sbjct: 436 RSTGPWNAIIAGLGVHGHGAKALSLFSQMQQEEIKPDHVTFVSLLAACSHAGLVDQGRSF 495
Query: 355 HAYAIRCGYDSDVHIG---TALVDMYAKCGSLKHARLAYKRIST-PDLVSQNAMLTAYAM 410
+ + V I T +VDM + G L A + + PD A+L A +
Sbjct: 496 --FDLMQTVYGIVPIAKHYTCMVDMLGRAGQLDEAFEFIQSMPIKPDSAVWGALLGACRI 553
Query: 411 HGHGKEG 417
HG+ + G
Sbjct: 554 HGNVEMG 560
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 131/301 (43%), Gaps = 45/301 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K +D A+KVF +P+RD VSWN+++T NGL EA+ M +
Sbjct: 314 MYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLANEAIRIYNDMHN--------- 364
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
EGL+P T SVLPA + L L G H
Sbjct: 365 --------------------------HEGLKPIQGTFVSVLPAYSYLGGLQQGMRMHALS 398
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G + +V L+D+Y +CG ++ A+ +F ++ N II G +G+ A+A
Sbjct: 399 IKTGLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHMPRRSTGPWNAIIAGLGVHGHGAKAL 458
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LF QM+ ++ +++ S+++ L D+ S F + GI P + + ++
Sbjct: 459 SLFSQMQQEEIKPDHVTFVSLLAACSHAGLVDQGRSFFDLMQTVYGIVPIAKHYTCMVDM 518
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQ-----DLVAAQMAFD-EIEN 294
L + E ++ ++ D+ V GAL+ CR VA+Q F+ + EN
Sbjct: 519 LGRAGQLDEAFE---FIQSMPIKPDSAVWGALLGA-CRIHGNVEMGKVASQNLFELDPEN 574
Query: 295 I 295
+
Sbjct: 575 V 575
>gi|334184678|ref|NP_180987.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546770|sp|O64705.2|PP184_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g34400
gi|330253874|gb|AEC08968.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 621
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 180/535 (33%), Positives = 288/535 (53%), Gaps = 42/535 (7%)
Query: 54 NETPNLVSWSAVIGGFTQNGYDEEAIGMLFR-MQAEGLEPNARTLSSVLPACARLQKLSL 112
E PN S++ +I G T D EA L+R M+ GL+P+ T + V ACA+L+++ +
Sbjct: 91 TEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGV 150
Query: 113 GKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCE 172
G+ H + + G + + + L+ +Y +CG VGY
Sbjct: 151 GRSVHSSLFKVGLERDVHINHSLIMMYAKCGQ-----------------------VGY-- 185
Query: 173 NGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSF 232
AR+LFD++ +R +SWNSMISGY + +A +FR + +G EP
Sbjct: 186 ------ARKLFDEI----TERDTVSWNSMISGYSEAGYAKDAMDLFRKM-EEEGFEPDER 234
Query: 233 TFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI 292
T S+L AC+ + LR G+ + +AI + TF+G L+ MY + DL +A+ F+++
Sbjct: 235 TLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQM 294
Query: 293 ENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGK 352
+ + + N + A +LF EM ++PD T+ +LSAC S+ +E GK
Sbjct: 295 IKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGK 354
Query: 353 QVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHG 412
Q+ +A ++++ T LVDMY KCG ++ A ++ + + + NAM+TAYA G
Sbjct: 355 QIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQG 414
Query: 413 HGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFF-DLMAYYDVKPSLKHY 471
H KE + F R+ P I+F+ LSACVHAG + G +F ++ + + + P ++HY
Sbjct: 415 HAKEALLLFDRM---SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHY 471
Query: 472 TCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIEL-E 530
T ++DLLSRAG L EA+EF+++ P PD +M A+LG C ++ + A L+E+ E
Sbjct: 472 TNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKE 531
Query: 531 PNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRA 585
N GNYV+ +N+ A W + A+ R M+DR + K+PGCSWIE E+ +F A
Sbjct: 532 AKNAGNYVISSNVLADMKMWDESAKMRALMRDRGVVKTPGCSWIEIEGELMEFLA 586
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 104/410 (25%), Positives = 175/410 (42%), Gaps = 79/410 (19%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG + A+K+F + ERD VSWNS+++
Sbjct: 176 MYAKCGQVGYARKLFDEITERDTVSWNSMIS----------------------------- 206
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
G+++ GY ++A+ + +M+ EG EP+ RTL S+L AC+ L L G+
Sbjct: 207 -------GYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMA 259
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ F+ + L+ +Y +CGD+ SA ++F++ K+ V+ +I Y +NG +EA
Sbjct: 260 ITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAF 319
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+LF +ME + G+ P + T +VL A
Sbjct: 320 KLFFEME------------------------------------KTGVSPDAGTLSTVLSA 343
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C + +L GK+I A L LQ + +V LV+MY + + A F+ +
Sbjct: 344 CGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATW 403
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTP-DIYTVGIILSACSSLATMERG-KQVHAYA 358
+ + A+ LF M + P DI +G +LSAC + +G + H +
Sbjct: 404 NAMITAYAHQGHAKEALLLFDRM---SVPPSDITFIG-VLSACVHAGLVHQGCRYFHEMS 459
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNAMLTA 407
G + T ++D+ ++ G L A +R PD + A+L A
Sbjct: 460 SMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGA 509
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 89/231 (38%), Gaps = 51/231 (22%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKCG +++A +VF+ MP ++ +WN+++TA A G EAL +RMS
Sbjct: 378 MYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRMS---------- 427
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLG-KEFHGY 119
+ P+ T VL AC + G + FH
Sbjct: 428 -----------------------------VPPSDITFIGVLSACVHAGLVHQGCRYFHEM 458
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ G + ++D+ R G + A + +F K + I+G C
Sbjct: 459 SSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAI 518
Query: 180 RE-----LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRD 225
RE L + E +IS N + D ++DE+ M LMRD
Sbjct: 519 REKAMRMLMEMKEAKNAGNYVISSNVL----ADMKMWDESAKM--RALMRD 563
>gi|3128231|gb|AAC26711.1| hypothetical protein [Arabidopsis thaliana]
gi|20197159|gb|AAM14947.1| hypothetical protein [Arabidopsis thaliana]
Length = 617
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 180/535 (33%), Positives = 288/535 (53%), Gaps = 42/535 (7%)
Query: 54 NETPNLVSWSAVIGGFTQNGYDEEAIGMLFR-MQAEGLEPNARTLSSVLPACARLQKLSL 112
E PN S++ +I G T D EA L+R M+ GL+P+ T + V ACA+L+++ +
Sbjct: 87 TEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGV 146
Query: 113 GKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCE 172
G+ H + + G + + + L+ +Y +CG VGY
Sbjct: 147 GRSVHSSLFKVGLERDVHINHSLIMMYAKCGQ-----------------------VGY-- 181
Query: 173 NGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSF 232
AR+LFD++ +R +SWNSMISGY + +A +FR + +G EP
Sbjct: 182 ------ARKLFDEI----TERDTVSWNSMISGYSEAGYAKDAMDLFRKM-EEEGFEPDER 230
Query: 233 TFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI 292
T S+L AC+ + LR G+ + +AI + TF+G L+ MY + DL +A+ F+++
Sbjct: 231 TLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQM 290
Query: 293 ENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGK 352
+ + + N + A +LF EM ++PD T+ +LSAC S+ +E GK
Sbjct: 291 IKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGK 350
Query: 353 QVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHG 412
Q+ +A ++++ T LVDMY KCG ++ A ++ + + + NAM+TAYA G
Sbjct: 351 QIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQG 410
Query: 413 HGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFF-DLMAYYDVKPSLKHY 471
H KE + F R+ P I+F+ LSACVHAG + G +F ++ + + + P ++HY
Sbjct: 411 HAKEALLLFDRM---SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHY 467
Query: 472 TCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIEL-E 530
T ++DLLSRAG L EA+EF+++ P PD +M A+LG C ++ + A L+E+ E
Sbjct: 468 TNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKE 527
Query: 531 PNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRA 585
N GNYV+ +N+ A W + A+ R M+DR + K+PGCSWIE E+ +F A
Sbjct: 528 AKNAGNYVISSNVLADMKMWDESAKMRALMRDRGVVKTPGCSWIEIEGELMEFLA 582
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 104/410 (25%), Positives = 175/410 (42%), Gaps = 79/410 (19%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG + A+K+F + ERD VSWNS+++
Sbjct: 172 MYAKCGQVGYARKLFDEITERDTVSWNSMIS----------------------------- 202
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
G+++ GY ++A+ + +M+ EG EP+ RTL S+L AC+ L L G+
Sbjct: 203 -------GYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMA 255
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ F+ + L+ +Y +CGD+ SA ++F++ K+ V+ +I Y +NG +EA
Sbjct: 256 ITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAF 315
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+LF +ME + G+ P + T +VL A
Sbjct: 316 KLFFEME------------------------------------KTGVSPDAGTLSTVLSA 339
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C + +L GK+I A L LQ + +V LV+MY + + A F+ +
Sbjct: 340 CGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATW 399
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTP-DIYTVGIILSACSSLATMERG-KQVHAYA 358
+ + A+ LF M + P DI +G +LSAC + +G + H +
Sbjct: 400 NAMITAYAHQGHAKEALLLFDRM---SVPPSDITFIG-VLSACVHAGLVHQGCRYFHEMS 455
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNAMLTA 407
G + T ++D+ ++ G L A +R PD + A+L A
Sbjct: 456 SMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGA 505
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 89/231 (38%), Gaps = 51/231 (22%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKCG +++A +VF+ MP ++ +WN+++TA A G EAL +RMS
Sbjct: 374 MYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRMS---------- 423
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLG-KEFHGY 119
+ P+ T VL AC + G + FH
Sbjct: 424 -----------------------------VPPSDITFIGVLSACVHAGLVHQGCRYFHEM 454
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ G + ++D+ R G + A + +F K + I+G C
Sbjct: 455 SSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAI 514
Query: 180 RE-----LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRD 225
RE L + E +IS N + D ++DE+ M LMRD
Sbjct: 515 REKAMRMLMEMKEAKNAGNYVISSNVL----ADMKMWDESAKM--RALMRD 559
>gi|222616424|gb|EEE52556.1| hypothetical protein OsJ_34807 [Oryza sativa Japonica Group]
Length = 1215
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 205/747 (27%), Positives = 342/747 (45%), Gaps = 160/747 (21%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERM----------- 49
+YG G + DA+++F MPER+ VSW +++ A ++NG + EAL +M
Sbjct: 390 LYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSSNGYLEEALRAYRQMRRDGVPCNANA 449
Query: 50 --------SSLDNETPNL------------------------------------------ 59
SL+NE P L
Sbjct: 450 FATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVANSLITMFGNLGRVHDAEKLFDRME 509
Query: 60 ----VSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKE 115
+SW+A+I ++ G + + M+ GL P+A TL S++ CA S G
Sbjct: 510 EHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASSDHFSHGSG 569
Query: 116 FHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGN 175
H R+ S+ V+N LV++Y G + A +F S ++ +S NT+I Y +N N
Sbjct: 570 IHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCN 629
Query: 176 VAEAR----ELFDQME-------------------------------HLGVQRGIISWNS 200
+A +LF E L +QR ++ NS
Sbjct: 630 STDALKTLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNS 689
Query: 201 MISGYVDNSLYDEAFSMFRDLLMRD------------------------------GIEPT 230
+I+ Y + ++A +F+ + D GI+P
Sbjct: 690 LITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPN 749
Query: 231 SFTFGSVLIACADMNSLRK-GKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAF 289
T ++ + A N L G+ +HA I G SD +V +L+ MY + +L ++ F
Sbjct: 750 YITMINIHGSFASSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIF 809
Query: 290 DEIENIENLLGKMKEDGFEPNVYTWNA--------------MQLFSEMLSLDLTPDIYTV 335
+ I N N+ +WNA ++LF +M D +
Sbjct: 810 NSITN--------------KNIVSWNAIIAANVQLGHGEEALKLFIDMQHAGNKLDRVCL 855
Query: 336 GIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST 395
LS+C+SLA++E G Q+H ++ G DSD ++ A +DMY KCG + +
Sbjct: 856 AECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMDEMLQVVPDQAI 915
Query: 396 PDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEF 455
N +++ YA +G+ KE F++++A+G +PD+++F++ LSAC HAG + G ++
Sbjct: 916 RPQQCWNTLISGYAKYGYFKEAEETFKQMVATGRKPDYVTFVALLSACSHAGLVDKGIDY 975
Query: 456 FDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
++ MA + V P +KH C+VDLL R G EA +FI+++P+ P+ ++W +LL +H
Sbjct: 976 YNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAEKFIEEMPVLPNDLIWRSLLSSSRTHK 1035
Query: 515 NLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWI 574
NLE G+ A +L+EL+P + YV+L+NL+A RW+D+ + R MK ++K P CSW+
Sbjct: 1036 NLEIGRKTAKKLLELDPFDDSAYVLLSNLYATNARWADVDKLRSHMKTININKRPACSWL 1095
Query: 575 EDRDEIHKFRASDRSHDRSEEIYTIID 601
+ ++E+ F DR H +E+IY +D
Sbjct: 1096 KLKNEVSTFGIGDRGHKHAEKIYAKLD 1122
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 120/530 (22%), Positives = 224/530 (42%), Gaps = 82/530 (15%)
Query: 46 LERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACA 105
L + + TP+ +W + G + G +A ML M+ G+ + L+S++ AC
Sbjct: 297 LHLFDEMADRTPS--TWYTAVSGCVRCGSHGKAFEMLRGMREPGVPLSGFALASLVTACE 354
Query: 106 RLQK---LSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVS 162
R + ++ G H R G M N ++ L+ +Y
Sbjct: 355 RRGRDEGIACGAAIHALTHRAGLMGNVYIGTALLHLYG---------------------- 392
Query: 163 CNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLL 222
G V++A+ LF +M +R ++SW +++ N +EA +R +
Sbjct: 393 ---------SRGIVSDAQRLFWEMP----ERNVVSWTALMVALSSNGYLEEALRAYRQM- 438
Query: 223 MRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDL 282
RDG+ + F +V+ C + + G ++ + I GLQ+ V +L+ M+ +
Sbjct: 439 RRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVANSLITMFGNLGRV 498
Query: 283 VAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAM--------------QLFSEMLSLDL 328
A+ FD +E E + +WNAM +FS+M L
Sbjct: 499 HDAEKLFDRME--------------EHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGL 544
Query: 329 TPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARL 388
PD T+ ++S C+S G +H+ +R DS V + ALV+MY+ G L A
Sbjct: 545 RPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEF 604
Query: 389 AYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGS 448
+ +S DL+S N M+++Y + + + + ++ + P+H++F SAL AC G+
Sbjct: 605 LFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGA 664
Query: 449 IKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLG 508
+ G ++ ++ +L ++ + + + +A + + +P D V + L+G
Sbjct: 665 LIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMP-THDIVSYNVLIG 723
Query: 509 GCVSHGNLEFGQIAAD-----RLIELEPNNTGNYVMLANLFAYAGRWSDL 553
G + LE G A R ++P NY+ + N+ +DL
Sbjct: 724 G---YAVLEDGTKAMQVFSWMRSAGIKP----NYITMINIHGSFASSNDL 766
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 110/263 (41%), Gaps = 11/263 (4%)
Query: 253 IHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMA---FDEIENIENLLGKMKEDGFEP 309
IH LA+ L L F L+ Y R +D AA A FDE+ + G
Sbjct: 261 IHGLAVRLALPLSAFHRNTLLAFYFRQRDASAAAAALHLFDEMADRTPSTWYTAVSGCVR 320
Query: 310 NVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMER---GKQVHAYAIRCGYDSD 366
A ++ M + + + +++AC E G +HA R G +
Sbjct: 321 CGSHGKAFEMLRGMREPGVPLSGFALASLVTACERRGRDEGIACGAAIHALTHRAGLMGN 380
Query: 367 VHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILA 426
V+IGTAL+ +Y G + A+ + + ++VS A++ A + +G+ +E + +R++
Sbjct: 381 VYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSSNGYLEEALRAYRQMRR 440
Query: 427 SGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGE 486
G + +F + +S C GS++ + + V + L++ G LG
Sbjct: 441 DGVPCNANAFATVVSLC---GSLENEVPGLQVASQVIVSGLQNQVSVANSLITMFGNLGR 497
Query: 487 AYEFIKKIPMAP--DSVMWGALL 507
++ K D++ W A++
Sbjct: 498 VHDAEKLFDRMEEHDTISWNAMI 520
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 18/103 (17%)
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LFD+M R +W + +SG V AF M R + R G+ + F S++ A
Sbjct: 75 HLFDEM----ADRTPSTWYTAVSGCVRCGRDGTAFEMLRGMRER-GVPLSGFALASLVTA 129
Query: 241 CADMNSLRKGKE--------IHALAIALGLQSDTFVGGALVEM 275
C R+G++ IHAL GL + ++G AL+ +
Sbjct: 130 CE-----RRGRDEGIACGAAIHALTHRAGLMGNVYIGRALLHL 167
>gi|297814636|ref|XP_002875201.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297814638|ref|XP_002875202.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321039|gb|EFH51460.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321040|gb|EFH51461.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 708
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 187/575 (32%), Positives = 299/575 (52%), Gaps = 50/575 (8%)
Query: 8 LDDAKKV---FKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSA 64
LD+ KK+ +P D V ++ A G + + + E D N+V W++
Sbjct: 170 LDNGKKIHCQIVKVPSFDNVVLTGLLDMYAKCGEIKSSYKVFE-----DITLRNVVCWTS 224
Query: 65 VIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNG 124
+I G+ +N EE + + RM+ + N T +++ AC +L+ L GK FHG + ++G
Sbjct: 225 MIAGYVKNDLYEEGLVLFNRMRENSVLGNEYTYGTLVMACTKLRALHQGKWFHGCLIKSG 284
Query: 125 FMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFD 184
+ +V L+D+Y +CGD ++ AR +F+
Sbjct: 285 IELSSCLVTSLLDMYVKCGD-------------------------------ISNARRVFN 313
Query: 185 QMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADM 244
+ H+ ++ W +MI GY N +EA S+F+ + GI+P T SVL C +
Sbjct: 314 EHSHVD----LVMWTAMIVGYTHNGSVNEALSLFQKM-SGVGIKPNCVTIASVLSGCGLV 368
Query: 245 NSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG-KMK 303
+L G+ IH L+I +G+ DT V ALV MY + A+ F E+E+ ++++
Sbjct: 369 GNLELGRSIHGLSIKVGIW-DTNVANALVHMYAKCYQNRDAKYVF-EMESEKDIVAWNSI 426
Query: 304 EDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGY 363
GF N A+ LF M + + P+ TV + SAC+SL ++ G +HAY+++ G+
Sbjct: 427 ISGFSQNGSIHEALFLFHRMNTESVMPNGVTVASLFSACASLGSLAIGSSLHAYSVKLGF 486
Query: 364 --DSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHF 421
S VH+GTAL+D YAKCG + ARL + I + ++ +AM+ Y G K + F
Sbjct: 487 LASSSVHVGTALLDFYAKCGDAESARLIFDTIEEKNTITWSAMIGGYGKQGDTKGSLELF 546
Query: 422 RRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSR 480
+L +P+ +F S LSAC H G + G ++F M Y+ PS KHYTCMVD+L+R
Sbjct: 547 EEMLKKQQKPNESTFTSVLSACSHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLAR 606
Query: 481 AGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVML 540
AGEL +A + I+K+P+ PD +GA L GC H + G+I ++++L P++ YV++
Sbjct: 607 AGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLV 666
Query: 541 ANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIE 575
+NL+A GRWS R MK R + K G S +E
Sbjct: 667 SNLYASDGRWSQAKEVRNLMKQRGLSKIAGHSIME 701
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 123/519 (23%), Positives = 234/519 (45%), Gaps = 81/519 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+YG G DA+ VF +PE D W ++ R L+NE+ ++
Sbjct: 97 LYGSFGYTKDARLVFDQIPEPDFYLWKVIL-----------------RCYCLNNESFEVI 139
Query: 61 SWSAVI--GGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHG 118
+ ++ GF GYD+ S L AC +Q L GK+ H
Sbjct: 140 KFYDLLMKHGF---GYDD------------------IVFSKALKACTEVQDLDNGKKIHC 178
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
I + N V+ GL+D+Y +CG++ S+ K+F +++N V ++I GY
Sbjct: 179 QIVKVPSFDN-VVLTGLLDMYAKCGEIKSSYKVFEDITLRNVVCWTSMIAGY-------- 229
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
V N LY+E +F + + + + +T+G+++
Sbjct: 230 ---------------------------VKNDLYEEGLVLF-NRMRENSVLGNEYTYGTLV 261
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
+AC + +L +GK H I G++ + + +L++MY + D+ A+ F+E +++ +
Sbjct: 262 MACTKLRALHQGKWFHGCLIKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLV 321
Query: 299 LGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYA 358
+ G+ N A+ LF +M + + P+ T+ +LS C + +E G+ +H +
Sbjct: 322 MWTAMIVGYTHNGSVNEALSLFQKMSGVGIKPNCVTIASVLSGCGLVGNLELGRSIHGLS 381
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGI 418
I+ G D ++ ALV MYAKC + A+ ++ S D+V+ N++++ ++ +G E +
Sbjct: 382 IKVGI-WDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEAL 440
Query: 419 AHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEF--FDLMAYYDVKPSLKHYTCMVD 476
F R+ P+ ++ S SAC GS+ GS + + + S+ T ++D
Sbjct: 441 FLFHRMNTESVMPNGVTVASLFSACASLGSLAIGSSLHAYSVKLGFLASSSVHVGTALLD 500
Query: 477 LLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
++ G+ E+ I +++ W A++GG G+
Sbjct: 501 FYAKCGD-AESARLIFDTIEEKNTITWSAMIGGYGKQGD 538
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 111/469 (23%), Positives = 206/469 (43%), Gaps = 72/469 (15%)
Query: 100 VLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKN 159
+L C + L ++ HG +T NG M + + LV +Y G ++K
Sbjct: 62 LLSKCTNIDSL---RQAHGVLTGNGLMGDISIATKLVSLYGSFG--------YTK----- 105
Query: 160 EVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSM-- 217
+AR +FDQ+ + W ++ Y N +E+F +
Sbjct: 106 ------------------DARLVFDQIP----EPDFYLWKVILRCYCLN---NESFEVIK 140
Query: 218 FRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYC 277
F DLLM+ G F L AC ++ L GK+IH + + D V L++MY
Sbjct: 141 FYDLLMKHGFGYDDIVFSKALKACTEVQDLDNGKKIHCQIVKVP-SFDNVVLTGLLDMYA 199
Query: 278 RYQDLVAAQMAFDEIENIENLL-------GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTP 330
+ ++ ++ F++I + N++ G +K D +E + LF+ M +
Sbjct: 200 KCGEIKSSYKVFEDI-TLRNVVCWTSMIAGYVKNDLYEE------GLVLFNRMRENSVLG 252
Query: 331 DIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAY 390
+ YT G ++ AC+ L + +GK H I+ G + + T+L+DMY KCG + +AR +
Sbjct: 253 NEYTYGTLVMACTKLRALHQGKWFHGCLIKSGIELSSCLVTSLLDMYVKCGDISNARRVF 312
Query: 391 KRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIK 450
S DLV AM+ Y +G E ++ F+++ G +P+ ++ S LS C G+++
Sbjct: 313 NEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMSGVGIKPNCVTIASVLSGCGLVGNLE 372
Query: 451 TGSEFFDL---MAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALL 507
G L + +D + +V + ++ + +A +++ ++ D V W +++
Sbjct: 373 LGRSIHGLSIKVGIWDTNVA----NALVHMYAKCYQNRDA-KYVFEMESEKDIVAWNSII 427
Query: 508 GGCVSHGNLEFGQIAADRLI--ELEPNNTGNYVMLANLFAYAGRWSDLA 554
G +G++ R+ + PN V +A+LF+ LA
Sbjct: 428 SGFSQNGSIHEALFLFHRMNTESVMPNG----VTVASLFSACASLGSLA 472
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 114/255 (44%), Gaps = 38/255 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC DAK VF+M E+D +V
Sbjct: 398 MYAKCYQNRDAKYVFEMESEKD------------------------------------IV 421
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+++I GF+QNG EA+ + RM E + PN T++S+ ACA L L++G H Y
Sbjct: 422 AWNSIISGFSQNGSIHEALFLFHRMNTESVMPNGVTVASLFSACASLGSLAIGSSLHAYS 481
Query: 121 TRNGFM--SNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
+ GF+ S+ V L+D Y +CGD SA IF KN ++ + +I GY + G+
Sbjct: 482 VKLGFLASSSVHVGTALLDFYAKCGDAESARLIFDTIEEKNTITWSAMIGGYGKQGDTKG 541
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
+ ELF++M + ++ S++S + +E F + P++ + ++
Sbjct: 542 SLELFEEMLKKQQKPNESTFTSVLSACSHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMV 601
Query: 239 IACADMNSLRKGKEI 253
A L + +I
Sbjct: 602 DMLARAGELEQALDI 616
>gi|225423549|ref|XP_002274857.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial [Vitis vinifera]
Length = 875
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 200/672 (29%), Positives = 320/672 (47%), Gaps = 113/672 (16%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYG+ LDDA K F MP RD +V
Sbjct: 144 MYGEMSCLDDACKAFDTMPIRD------------------------------------VV 167
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+WS+++ F QNG E + M +M +E +EP++ T+ SV AC+ L L LG+ HGY+
Sbjct: 168 AWSSIVLNFVQNGQASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRSVHGYV 227
Query: 121 TRNGFMSNPFVVNGL-------------------------------VDVYRRCGDMLSAL 149
R SN + N L + Y + G AL
Sbjct: 228 VRREIESNASLNNSLIVMYGKLGDLYSAERLFENVPCRMTAPWTPMISCYNQSGCFQEAL 287
Query: 150 KIFSK----------------------------------FSIKNEVSCNTIIVG------ 169
+F+K F I+ + +G
Sbjct: 288 NVFAKMQEFKMEPNQVTMVGVLCACARLGRVKEGRSVHGFVIRRAMDPELDFLGPALMEL 347
Query: 170 YCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEP 229
Y + GN+ + ++F+ ++ ++ I+SWN++IS + N +EA +F + G+ P
Sbjct: 348 YADTGNLRDCHKVFETIK----EKTILSWNTLISIFTRNGQPEEALLLFVQM-QTQGLMP 402
Query: 230 TSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAF 289
S++ S L AC ++ + G +IH I G +D FV AL++MY + + +A F
Sbjct: 403 DSYSLASSLSACGTISFSQLGAQIHGYIIKTGNFND-FVQNALIDMYAKCGFVHSANKMF 461
Query: 290 DEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATME 349
++I+ + GF N Y+ A+ LF +M + D T ++ ACS L +E
Sbjct: 462 EKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLE 521
Query: 350 RGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYA 409
+GK VH I G D ++ TAL DMY+KCG L+ A + R+S +VS + M+ Y
Sbjct: 522 KGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSERSIVSWSVMIAGYG 581
Query: 410 MHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLK 469
MHG I+ F ++L SG +P+ I+F+ LSAC HAG+++ G +F+ M+ + V+P
Sbjct: 582 MHGQINATISLFNQMLGSGIKPNDITFMHILSACSHAGAVEEGKLYFNSMSEFGVEPKHD 641
Query: 470 HYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIEL 529
H+ CMVDLLSRAG+L AY+ I +P +S +WGALL GC H ++ + L+++
Sbjct: 642 HFACMVDLLSRAGDLNGAYQIITSLPFPANSSIWGALLNGCRIHKRIDIIKSIEKNLLDV 701
Query: 530 EPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRS 589
+ +TG Y +L+N++A G W + R MK + + K PG S IE +I++F D S
Sbjct: 702 DTADTGYYTLLSNIYAEEGTWDKFGKVRSMMKSKGLRKVPGYSTIEIDKKIYRFGPGDTS 761
Query: 590 HDRSEEIYTIID 601
H ++++IY ++
Sbjct: 762 HSQTKDIYRFLE 773
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 118/479 (24%), Positives = 219/479 (45%), Gaps = 78/479 (16%)
Query: 57 PNLVSWSAVIGGFTQNGYDEEAIGMLFRM-QAEGLEPNARTLSSVLPACARLQKLSLGKE 115
P+ W +I + G+ EEA+ + M + + + SVL AC+ LS+G +
Sbjct: 62 PDSFMWGVLIKCYVWGGFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGK 121
Query: 116 FHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGN 175
HG + + GF S+ V L+ +Y E+SC
Sbjct: 122 VHGRVIKCGFESDAVVETSLLCMY-------------------GEMSC------------ 150
Query: 176 VAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFG 235
+ +A + FD M R +++W+S++ +V N E MF ++ + +EP S T
Sbjct: 151 LDDACKAFDTMP----IRDVVAWSSIVLNFVQNGQASEGLDMFSQMI-SEAVEPDSVTML 205
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
SV AC+++ SLR G+ +H + ++S+ + +L+ MY + DL +A+ F
Sbjct: 206 SVTEACSELGSLRLGRSVHGYVVRREIESNASLNNSLIVMYGKLGDLYSAERLF------ 259
Query: 296 ENLLGKMKEDGFEPNVYTWN-------AMQLFSEMLSLDLTPDIYTVGIILSACSSLATM 348
EN+ +M + P + +N A+ +F++M + P+ T+ +L AC+ L +
Sbjct: 260 ENVPCRMTAP-WTPMISCYNQSGCFQEALNVFAKMQEFKMEPNQVTMVGVLCACARLGRV 318
Query: 349 ERGKQVHAYAIRCGYDSDV-HIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTA 407
+ G+ VH + IR D ++ +G AL+++YA G+L+ ++ I ++S N +++
Sbjct: 319 KEGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISI 378
Query: 408 YAMHGHGKEGIAHFRRILASGFRPDH------------ISFLSALSACVHAGSIKTGSEF 455
+ +G +E + F ++ G PD ISF S L A +H IKTG+ F
Sbjct: 379 FTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISF-SQLGAQIHGYIIKTGN-F 436
Query: 456 FDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
D + ++D+ ++ G + A + +KI V W +++ G +G
Sbjct: 437 NDFVQ-----------NALIDMYAKCGFVHSANKMFEKIK-EKSLVTWNSMICGFSQNG 483
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 88/385 (22%), Positives = 167/385 (43%), Gaps = 10/385 (2%)
Query: 138 VYRRCGDMLSALKIFSKFSI----KNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQR 193
++RRC + ++ + I ++ + +I Y + G ++ +FD +
Sbjct: 7 LFRRCATSTTLTQLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFP----KP 62
Query: 194 GIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEI 253
W +I YV ++EA S++ +++ +D + ++F F SVL AC+ L G ++
Sbjct: 63 DSFMWGVLIKCYVWGGFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKV 122
Query: 254 HALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYT 313
H I G +SD V +L+ MY L A AFD + + + F N
Sbjct: 123 HGRVIKCGFESDAVVETSLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQNGQA 182
Query: 314 WNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTAL 373
+ +FS+M+S + PD T+ + ACS L ++ G+ VH Y +R +S+ + +L
Sbjct: 183 SEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNASLNNSL 242
Query: 374 VDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDH 433
+ MY K G L A ++ + M++ Y G +E + F ++ P+
Sbjct: 243 IVMYGKLGDLYSAERLFENVPCRMTAPWTPMISCYNQSGCFQEALNVFAKMQEFKMEPNQ 302
Query: 434 ISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHY-TCMVDLLSRAGELGEAYEFIK 492
++ + L AC G +K G + + P L +++L + G L + ++ +
Sbjct: 303 VTMVGVLCACARLGRVKEGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFE 362
Query: 493 KIPMAPDSVMWGALLGGCVSHGNLE 517
I + W L+ +G E
Sbjct: 363 TIK-EKTILSWNTLISIFTRNGQPE 386
>gi|225425668|ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|296086362|emb|CBI31951.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 173/479 (36%), Positives = 269/479 (56%), Gaps = 42/479 (8%)
Query: 146 LSALKIFSKFSIK----NEVSCNTIIVGYCE----NGNVAEARELFDQMEHLGVQRGIIS 197
L LK F+IK +++S T + +C ++ A LFDQ+ Q I+
Sbjct: 33 LRELKQLQAFAIKTHLHSDLSVLTKFINFCSLNPTTTSMQHAHHLFDQIP----QPDIVL 88
Query: 198 WNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALA 257
+N+M GY AF++F +L G+ P +TF S+L ACA +L +G+++H LA
Sbjct: 89 FNTMARGYARTDTPLRAFTLFTQILF-SGLFPDDYTFPSLLKACASCKALEEGRQLHCLA 147
Query: 258 IALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAM 317
I LGL + +V L+ MY ++ A+ FD+I +EP V T+NAM
Sbjct: 148 IKLGLSENVYVCPTLINMYTACNEMDCARRVFDKI--------------WEPCVVTYNAM 193
Query: 318 --------------QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGY 363
LF E+ + +L P T+ +LS+C+ L ++ GK +H Y + G+
Sbjct: 194 ITGYARGSRPNEALSLFRELQARNLKPTDVTMLSVLSSCALLGALDLGKWMHEYVKKNGF 253
Query: 364 DSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRR 423
+ V + TAL+DMYAKCGSL A ++ ++ D + +AM+ AYA+HGHG + ++ F+
Sbjct: 254 NRFVKVDTALIDMYAKCGSLDDAVCVFENMAVRDTQAWSAMIMAYAIHGHGLKAVSLFKE 313
Query: 424 ILASGFRPDHISFLSALSACVHAGSIKTGSEFF-DLMAYYDVKPSLKHYTCMVDLLSRAG 482
+ +G PD I+FL L AC H G ++ G E+F + Y V P +KHY CMVDLL RAG
Sbjct: 314 MRKAGTEPDEITFLGLLYACSHTGLVEEGFEYFYGMRDKYGVIPGIKHYGCMVDLLGRAG 373
Query: 483 ELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLAN 542
L EAYEFI +P+ P ++W LL C SHGN+E G+ +++ EL+ ++ G+Y++L+N
Sbjct: 374 RLEEAYEFIVGLPIRPTPILWRTLLSACGSHGNVELGKRVIEQIFELDDSHGGDYIILSN 433
Query: 543 LFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
L A AGRW D+ R+ M +R + K PGCS +E + +H+F + D H S +++ +D
Sbjct: 434 LCARAGRWEDVNYVRKLMNERGVVKIPGCSSVEVNNVVHEFFSGDGVHSVSTKLHQALD 492
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 119/263 (45%), Gaps = 40/263 (15%)
Query: 23 CVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGML 82
C + ++ TAC ++C R+ E P +V+++A+I G+ + EA+ +
Sbjct: 159 CPTLINMYTAC-------NEMDCARRVFDKIWE-PCVVTYNAMITGYARGSRPNEALSLF 210
Query: 83 FRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRC 142
+QA L+P T+ SVL +CA L L LGK H Y+ +NGF V L+D+Y +C
Sbjct: 211 RELQARNLKPTDVTMLSVLSSCALLGALDLGKWMHEYVKKNGFNRFVKVDTALIDMYAKC 270
Query: 143 GDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMI 202
G + A+ +F ++++ + + +I+ Y +G+ +A LF +M G + I++ ++
Sbjct: 271 GSLDDAVCVFENMAVRDTQAWSAMIMAYAIHGHGLKAVSLFKEMRKAGTEPDEITFLGLL 330
Query: 203 SGYVDNSLYDEAFSMFR-------------------DLLMRDG-------------IEPT 230
L +E F F DLL R G I PT
Sbjct: 331 YACSHTGLVEEGFEYFYGMRDKYGVIPGIKHYGCMVDLLGRAGRLEEAYEFIVGLPIRPT 390
Query: 231 SFTFGSVLIACADMNSLRKGKEI 253
+ ++L AC ++ GK +
Sbjct: 391 PILWRTLLSACGSHGNVELGKRV 413
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 94/383 (24%), Positives = 156/383 (40%), Gaps = 52/383 (13%)
Query: 57 PNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEF 116
P++V ++ + G+ + A + ++ GL P+ T S+L ACA + L G++
Sbjct: 84 PDIVLFNTMARGYARTDTPLRAFTLFTQILFSGLFPDDYTFPSLLKACASCKALEEGRQL 143
Query: 117 HGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNV 176
H + G N +V L+++Y C +M A ++F K V+ N +I GY
Sbjct: 144 HCLAIKLGLSENVYVCPTLINMYTACNEMDCARRVFDKIWEPCVVTYNAMITGYARGSRP 203
Query: 177 AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGS 236
EA S+FR+L R+ ++PT T S
Sbjct: 204 NEA-----------------------------------LSLFRELQARN-LKPTDVTMLS 227
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
VL +CA + +L GK +H G V AL++MY + L A F+ + +
Sbjct: 228 VLSSCALLGALDLGKWMHEYVKKNGFNRFVKVDTALIDMYAKCGSLDDAVCVFENMAVRD 287
Query: 297 NLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHA 356
+ + + A+ LF EM PD T +L ACS +E G + +
Sbjct: 288 TQAWSAMIMAYAIHGHGLKAVSLFKEMRKAGTEPDEITFLGLLYACSHTGLVEEGFE-YF 346
Query: 357 YAIRCGY---DSDVHIGTALVDMYAKCGSLKHARLAYKRIS----TPDLVSQNAMLTAYA 409
Y +R Y H G +VD+ + G L+ AY+ I P + +L+A
Sbjct: 347 YGMRDKYGVIPGIKHYG-CMVDLLGRAGRLEE---AYEFIVGLPIRPTPILWRTLLSACG 402
Query: 410 MHGHGKEGIAHFRRILASGFRPD 432
HG+ + G +R++ F D
Sbjct: 403 SHGNVELG----KRVIEQIFELD 421
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 79/175 (45%), Gaps = 7/175 (4%)
Query: 338 ILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVD---MYAKCGSLKHARLAYKRIS 394
+L C+SL + KQ+ A+AI+ SD+ + T ++ + S++HA + +I
Sbjct: 26 LLPKCTSLREL---KQLQAFAIKTHLHSDLSVLTKFINFCSLNPTTTSMQHAHHLFDQIP 82
Query: 395 TPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSE 454
PD+V N M YA F +IL SG PD +F S L AC +++ G +
Sbjct: 83 QPDIVLFNTMARGYARTDTPLRAFTLFTQILFSGLFPDDYTFPSLLKACASCKALEEGRQ 142
Query: 455 FFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
L + ++ ++++ + E+ A KI P V + A++ G
Sbjct: 143 LHCLAIKLGLSENVYVCPTLINMYTACNEMDCARRVFDKI-WEPCVVTYNAMITG 196
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 2/117 (1%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGSLDDA VF+ M RD +W++++ A A +G L+A+ + M E P+ +
Sbjct: 266 MYAKCGSLDDAVCVFENMAVRDTQAWSAMIMAYAIHGHGLKAVSLFKEMRKAGTE-PDEI 324
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEF 116
++ ++ + G EE + M+ + G+ P + ++ R +L EF
Sbjct: 325 TFLGLLYACSHTGLVEEGFEYFYGMRDKYGVIPGIKHYGCMVDLLGRAGRLEEAYEF 381
>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 743
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 181/579 (31%), Positives = 292/579 (50%), Gaps = 70/579 (12%)
Query: 57 PNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLE-PNARTLSSVLPACARLQKLSLGKE 115
PNL +W+ +I + + +++ + RM + + P+ T ++ A + L++L GK
Sbjct: 98 PNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKA 157
Query: 116 FHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGN 175
FHG + + S+ F++N L+ Y +CG++ ++F ++ VS N++I + + G
Sbjct: 158 FHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGC 217
Query: 176 VAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFG 235
EA ELF +ME ++P T
Sbjct: 218 PEEALELFQEME------------------------------------TQNVKPNGITMV 241
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
VL ACA + G+ +H+ + + A+++MY + + A+ FD++
Sbjct: 242 GVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEK 301
Query: 296 E------NLLGKMKEDGFE---------PN--VYTWN--------------AMQLFSEM- 323
+ L+G K ++ PN + WN A++LF E+
Sbjct: 302 DIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELFHELQ 361
Query: 324 LSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSL 383
LS PD T+ LSAC+ L M+ G +H Y + G + H+ T+L+DMY KCG L
Sbjct: 362 LSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQGMKLNCHLTTSLIDMYCKCGDL 421
Query: 384 KHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSAC 443
+ A + + + D+ +AM+ AMHGHGK+ IA F ++ +P+ ++F + L AC
Sbjct: 422 QKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCAC 481
Query: 444 VHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVM 502
H G ++ G FF+ M Y V P +KHY CMVD+L RAG L EA E I+K+PMAP + +
Sbjct: 482 SHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLEEAVELIEKMPMAPAASV 541
Query: 503 WGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKD 562
WGALLG C H N+ + A +LIELEP N G YV+L+N++A AG+W ++ R+ M+D
Sbjct: 542 WGALLGACTIHENVVLAEQACSQLIELEPGNHGAYVLLSNIYAKAGKWDRVSGLRKLMRD 601
Query: 563 RRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
+ K PGCS IE +H+F D SH +++IY +D
Sbjct: 602 VGLKKEPGCSSIEVDGIVHEFLVGDNSHPSAKKIYAKLD 640
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 120/412 (29%), Positives = 186/412 (45%), Gaps = 42/412 (10%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y KCG L +VF +P RD VSWNS++TA G EALE + M
Sbjct: 181 YAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEEALELFQEME----------- 229
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
TQN ++PN T+ VL ACA+ G+ H YI
Sbjct: 230 --------TQN-----------------VKPNGITMVGVLSACAKKSDFEFGRWVHSYIE 264
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
RN + + N ++D+Y +CG + A ++F K K+ VS T++VGY + G A+
Sbjct: 265 RNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQG 324
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
+FD M + + I +WN++IS Y EA +F +L + +P T S L AC
Sbjct: 325 IFDAMPN----QDIAAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSAC 380
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK 301
A + ++ G IH G++ + + +L++MYC+ DL A M F +E + +
Sbjct: 381 AQLGAMDLGGWIHVYIKKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWS 440
Query: 302 MKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ-VHAYAIR 360
G + + +A+ LFS+M + P+ T IL ACS + +E G+ + +
Sbjct: 441 AMIAGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELV 500
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHA-RLAYKRISTPDLVSQNAMLTAYAMH 411
G V +VD+ + G L+ A L K P A+L A +H
Sbjct: 501 YGVLPGVKHYACMVDILGRAGLLEEAVELIEKMPMAPAASVWGALLGACTIH 552
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 147/297 (49%), Gaps = 9/297 (3%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGS++DAK++F MPE+D VSW +++ A G A + M + D +
Sbjct: 281 MYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQD-----IA 335
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQ-AEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
+W+A+I + Q G +EA+ + +Q ++ +P+ TL S L ACA+L + LG H Y
Sbjct: 336 AWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVY 395
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
I + G N + L+D+Y +CGD+ AL +F K+ + +I G +G+ +A
Sbjct: 396 IKKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDA 455
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
LF +M+ V+ +++ +++ L +E + F + + G+ P + ++
Sbjct: 456 IALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVD 515
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
L + E L + + V GAL+ ++++V A+ A ++ +E
Sbjct: 516 ILGRAGLLEEAVE---LIEKMPMAPAASVWGALLGACTIHENVVLAEQACSQLIELE 569
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 134/316 (42%), Gaps = 41/316 (12%)
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEM--YCRYQDLVAAQMAFDEIE 293
S++ C++ L K+IHA + GL D F L+ + L AQ FD+I
Sbjct: 40 SLIDQCSETKQL---KQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIP 96
Query: 294 NIENLLGKMKEDGFEPNVYTWN--------------AMQLFSEML--SLDLTPDIYTVGI 337
+ PN+YTWN ++ +F ML S D PD +T
Sbjct: 97 H--------------PNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDF-PDKFTFPF 141
Query: 338 ILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPD 397
++ A S L + GK H I+ SDV I +L+ YAKCG L + I D
Sbjct: 142 LIKAASELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRD 201
Query: 398 LVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFD 457
+VS N+M+TA+ G +E + F+ + +P+ I+ + LSAC + G
Sbjct: 202 VVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHS 261
Query: 458 LMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
+ + SL M+D+ ++ G + +A K+P D V W +L G G +
Sbjct: 262 YIERNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMP-EKDIVSWTTMLVGYAKIGEYD 320
Query: 518 FGQIAADRLIELEPNN 533
AA + + PN
Sbjct: 321 ----AAQGIFDAMPNQ 332
>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 1573
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 181/579 (31%), Positives = 303/579 (52%), Gaps = 45/579 (7%)
Query: 27 NSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQ 86
NS++ + G+V A + LD L+SW+ +I + QN + EAI +
Sbjct: 933 NSLMNMYSKAGVVYAAEKTFINSPELD-----LISWNTMISSYAQNNLEMEAICTFRDLL 987
Query: 87 AEGLEPNARTLSSVLPACA---RLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCG 143
+GL+P+ TL+SVL AC+ + +LG + H Y + G +++ FV L+D+Y + G
Sbjct: 988 RDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGG 1047
Query: 144 DMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMIS 203
M A +F + + FD + SWN+++
Sbjct: 1048 KMDEA-----EFLLHGKYD--------------------FD----------LASWNAIMF 1072
Query: 204 GYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQ 263
GY+ ++ +A F L+ GI T + + A + +L++GK+I A AI LG
Sbjct: 1073 GYIKSNKSRKALEHF-SLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFN 1131
Query: 264 SDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEM 323
+D +V +++MY + D+ A F EI + + G+ N +A+ ++ M
Sbjct: 1132 NDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLM 1191
Query: 324 LSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSL 383
+ PD YT ++ A S L +E+GKQ+HA ++ Y D +GT+LVDMY KCGS+
Sbjct: 1192 RVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSV 1251
Query: 384 KHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSAC 443
+ A ++++ +V NAML A HGH E + FR + ++G +PD ++F+ LSAC
Sbjct: 1252 QDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSAC 1311
Query: 444 VHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVM 502
H+G ++FD M Y + P ++HY+C+VD L RAG + EA I +P + M
Sbjct: 1312 SHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASM 1371
Query: 503 WGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKD 562
+ ALLG C + G+ E + AD+L+ L+P+++ YV+L+N++A + +W D+ R MK
Sbjct: 1372 YRALLGACRTKGDAETAKRVADKLLALDPSDSSAYVLLSNIYAASRQWDDVTDARNMMKL 1431
Query: 563 RRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
+ + K PG SWI+ ++++H F DRSH ++ IY I+
Sbjct: 1432 KNVKKDPGFSWIDVKNKVHLFVVDDRSHPQASLIYEKIE 1470
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 139/560 (24%), Positives = 223/560 (39%), Gaps = 79/560 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGSL A++VF +RD V+WNS++ A A D+
Sbjct: 655 MYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYAQFA---------------DS------ 693
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
S+ V+ GF LF + E G TL+ +L C + + + HGY
Sbjct: 694 SYENVLEGFR-----------LFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGY 742
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ GF + FV LV++Y + G + A +F K ++ V N ++ Y EN EA
Sbjct: 743 AVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEA 802
Query: 180 RELFDQMEHLGVQ-----------------------------------------RGIISW 198
F G I +W
Sbjct: 803 LRFFSAFHRSGFXPDFSNLHCVIGGVNSDVSNNRKRHAEQVKAYAMKMFPFDQGSNIFAW 862
Query: 199 NSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAI 258
N ++ ++ A F+ LL R I S T +L A + L G++IHAL I
Sbjct: 863 NKKLTEFLHAGQIVAAIDCFKTLL-RSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVI 921
Query: 259 ALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQ 318
V +L+ MY + + AA+ F ++ + + N A+
Sbjct: 922 KSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAIC 981
Query: 319 LFSEMLSLDLTPDIYTVGIILSACSSLATMER---GKQVHAYAIRCGYDSDVHIGTALVD 375
F ++L L PD +T+ +L ACS+ E G QVH YAI+CG +D + TAL+D
Sbjct: 982 TFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALID 1041
Query: 376 MYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHIS 435
+Y+K G + A DL S NA++ Y ++ + HF + G D I+
Sbjct: 1042 LYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEIT 1101
Query: 436 FLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIP 495
+A+ A ++K G + L + ++D+ + G++ A E +I
Sbjct: 1102 LATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEIS 1161
Query: 496 MAPDSVMWGALLGGCVSHGN 515
PD V W ++ G + +G+
Sbjct: 1162 R-PDEVAWTTMISGYIENGD 1180
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/422 (21%), Positives = 170/422 (40%), Gaps = 64/422 (15%)
Query: 107 LQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTI 166
+ L LGK H I +G + + ++ N L+ +Y +CG + SA ++F K S ++ V+ N+I
Sbjct: 624 MADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSI 683
Query: 167 IVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDG 226
+ Y + + S+ +++ G+ F + R+ G
Sbjct: 684 LAAYAQFADS--------------------SYENVLEGF-------RLFGLLREF----G 712
Query: 227 IEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQ 286
T T +L C ++ + +H A+ +G + D FV GALV +YC+Y + A+
Sbjct: 713 FSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQAR 772
Query: 287 MAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLA 346
+ FD++ + +L + + N + A++ FS PD + ++ +S
Sbjct: 773 LLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSAFHRSGFXPDFSNLHCVIGGVNSDV 832
Query: 347 TMERGK---QVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNA 403
+ R + QV AYA++ + ++ + N
Sbjct: 833 SNNRKRHAEQVKAYAMKM----------------------------FPFDQGSNIFAWNK 864
Query: 404 MLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYD 463
LT + G I F+ +L S D ++ + LSA V A + G + L+
Sbjct: 865 KLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSS 924
Query: 464 VKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAA 523
P + ++++ S+AG + A + P D + W ++ + NLE I
Sbjct: 925 FAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPEL-DLISWNTMI-SSYAQNNLEMEAICT 982
Query: 524 DR 525
R
Sbjct: 983 FR 984
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 91/202 (45%), Gaps = 14/202 (6%)
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIEN---- 294
IA AD L+ GK HA + G D ++ L+ MY + L +A+ FD+ +
Sbjct: 622 IAMAD---LKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLV 678
Query: 295 ----IENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMER 350
I + + +E NV +LF + + T+ +L C ++
Sbjct: 679 TWNSILAAYAQFADSSYE-NVL--EGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQV 735
Query: 351 GKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAM 410
+ VH YA++ G++ D+ + ALV++Y K G + ARL + ++ D V N ML AY
Sbjct: 736 SETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVE 795
Query: 411 HGHGKEGIAHFRRILASGFRPD 432
+ E + F SGF PD
Sbjct: 796 NSFQDEALRFFSAFHRSGFXPD 817
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 72/156 (46%), Gaps = 5/156 (3%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGS+ DA +VF+ M R V WN+++ A +G V EAL M S + P+ V
Sbjct: 1244 MYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQS-NGIQPDKV 1302
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRM-QAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
++ V+ + +G EA M + G+ P S ++ A R ++ +E
Sbjct: 1303 TFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRI---QEAENV 1359
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKF 155
I F ++ + L+ R GD +A ++ K
Sbjct: 1360 IASMPFKASASMYRALLGACRTKGDAETAKRVADKL 1395
>gi|242051555|ref|XP_002454923.1| hypothetical protein SORBIDRAFT_03g001460 [Sorghum bicolor]
gi|241926898|gb|EES00043.1| hypothetical protein SORBIDRAFT_03g001460 [Sorghum bicolor]
Length = 741
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 184/600 (30%), Positives = 305/600 (50%), Gaps = 77/600 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G++ DA++VF MP R N V
Sbjct: 167 MYCKLGAISDARRVFDQMPHR------------------------------------NAV 190
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRM--QAEGLEPNARTLSSVLPACARLQKLSLGKEFHG 118
SW+A++ G+ EEA LFR+ Q LE N ++VL A + L +G + HG
Sbjct: 191 SWAAMVSGYATGKCSEEAFE-LFRLMLQECPLEKNEFVATAVLSAVSVPLGLLIGVQLHG 249
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
+ ++G + V N LV +Y + M +A+ +F +N
Sbjct: 250 LVLKDGLVGFVSVENSLVTMYAKAECMDAAMAVFGSSKERNS------------------ 291
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
I+W++MI+GY N D A +MF + G PT FTF +L
Sbjct: 292 -----------------ITWSAMITGYAQNGEADCAATMFLQM-HSAGFSPTEFTFVGIL 333
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
A +DM +L GK+ H L + LG + +V ALV+MY + A+ F ++ +++++
Sbjct: 334 NASSDMGALVVGKQAHGLMVKLGFERQVYVKSALVDMYAKCGCTGDAKDGFHQLYDVDDV 393
Query: 299 -LGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAY 357
+ G N A+ L+S M + P TV +L AC+ LA +E GKQ+HA
Sbjct: 394 VIWTAMITGHVQNGEHEEALMLYSRMDKEGVMPSYLTVTSVLRACACLAALEPGKQLHAQ 453
Query: 358 AIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEG 417
++CG+ +GTAL MY+KCG+L+ + + ++R+ D++S N++++ ++ HG G++
Sbjct: 454 ILKCGFGLGGSVGTALSTMYSKCGNLEDSMVVFRRMPDRDIISWNSIISGFSQHGRGRDA 513
Query: 418 IAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVD 476
+ F + G PDHI+F++ L AC H G + G +F M+ Y + P L HY C+VD
Sbjct: 514 LDLFEEMKLEGIAPDHITFINVLCACSHMGLVDRGWFYFRAMSKDYGLIPKLDHYACIVD 573
Query: 477 LLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGN 536
+LSRAG+L EA +FI+ I + + +W +LG C S + + G A ++L+EL ++
Sbjct: 574 ILSRAGQLKEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGEQLMELGTEDSSA 633
Query: 537 YVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEI 596
Y++L+N++A +W+D+ R R M+ R + K PGCSW+E ++++ F ++ H +E+I
Sbjct: 634 YILLSNIYAAQRKWNDVERVRHLMRLRGVSKDPGCSWVELNNQVNVFVVGEQQHPEAEKI 693
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 112/440 (25%), Positives = 194/440 (44%), Gaps = 37/440 (8%)
Query: 92 PNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKI 151
P + ++V A AR+ S G H + A K+
Sbjct: 118 PTPHSFAAVFTAAARVPSASAGAVAHAF----------------------------ACKL 149
Query: 152 FSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLY 211
S N ++ YC+ G +++AR +FDQM H R +SW +M+SGY
Sbjct: 150 PSSSGSNNVFVSTALLNMYCKLGAISDARRVFDQMPH----RNAVSWAAMVSGYATGKCS 205
Query: 212 DEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGA 271
+EAF +FR +L +E F +VL A + L G ++H L + GL V +
Sbjct: 206 EEAFELFRLMLQECPLEKNEFVATAVLSAVSVPLGLLIGVQLHGLVLKDGLVGFVSVENS 265
Query: 272 LVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPD 331
LV MY + + + AA F + ++ G+ N A +F +M S +P
Sbjct: 266 LVTMYAKAECMDAAMAVFGSSKERNSITWSAMITGYAQNGEADCAATMFLQMHSAGFSPT 325
Query: 332 IYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYK 391
+T IL+A S + + GKQ H ++ G++ V++ +ALVDMYAKCG A+ +
Sbjct: 326 EFTFVGILNASSDMGALVVGKQAHGLMVKLGFERQVYVKSALVDMYAKCGCTGDAKDGFH 385
Query: 392 RI-STPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIK 450
++ D+V AM+T + +G +E + + R+ G P +++ S L AC +++
Sbjct: 386 QLYDVDDVVIWTAMITGHVQNGEHEEALMLYSRMDKEGVMPSYLTVTSVLRACACLAALE 445
Query: 451 TGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGC 510
G + + T + + S+ G L ++ +++P D + W +++ G
Sbjct: 446 PGKQLHAQILKCGFGLGGSVGTALSTMYSKCGNLEDSMVVFRRMP-DRDIISWNSIISGF 504
Query: 511 VSHGNLEFGQIAADRLIELE 530
HG G+ A D E++
Sbjct: 505 SQHGR---GRDALDLFEEMK 521
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 100/385 (25%), Positives = 172/385 (44%), Gaps = 11/385 (2%)
Query: 140 RRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGN--VAEARELFDQMEHLGVQRGIIS 197
RR GD L + S + VS N++I YC + A +F + R + S
Sbjct: 30 RRAGDALHGWALKSGAASHTPVS-NSLITFYCSPPRPLLGAAFAVFADIP--AGLRDVAS 86
Query: 198 WNSMISGYVDNSLYDEAFSMFRDLLMR-DGIEPTSFTFGSVLIACADMNSLRKGKEIHAL 256
WNS+++ + A S FR ++ D + PT +F +V A A + S G HA
Sbjct: 87 WNSLLNPLSRHQPL-AALSHFRSMMSSTDAVLPTPHSFAAVFTAAARVPSASAGAVAHAF 145
Query: 257 AIALGLQS---DTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYT 313
A L S + FV AL+ MYC+ + A+ FD++ + + G+ +
Sbjct: 146 ACKLPSSSGSNNVFVSTALLNMYCKLGAISDARRVFDQMPHRNAVSWAAMVSGYATGKCS 205
Query: 314 WNAMQLFSEMLS-LDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTA 372
A +LF ML L + + +LSA S + G Q+H ++ G V + +
Sbjct: 206 EEAFELFRLMLQECPLEKNEFVATAVLSAVSVPLGLLIGVQLHGLVLKDGLVGFVSVENS 265
Query: 373 LVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPD 432
LV MYAK + A + + ++ +AM+T YA +G F ++ ++GF P
Sbjct: 266 LVTMYAKAECMDAAMAVFGSSKERNSITWSAMITGYAQNGEADCAATMFLQMHSAGFSPT 325
Query: 433 HISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIK 492
+F+ L+A G++ G + LM + + + +VD+ ++ G G+A +
Sbjct: 326 EFTFVGILNASSDMGALVVGKQAHGLMVKLGFERQVYVKSALVDMYAKCGCTGDAKDGFH 385
Query: 493 KIPMAPDSVMWGALLGGCVSHGNLE 517
++ D V+W A++ G V +G E
Sbjct: 386 QLYDVDDVVIWTAMITGHVQNGEHE 410
>gi|357437223|ref|XP_003588887.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477935|gb|AES59138.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 697
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 186/602 (30%), Positives = 305/602 (50%), Gaps = 74/602 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC + A K+F MP++D WN+
Sbjct: 150 MYAKCNEFECAVKLFDEMPDKDVACWNT-------------------------------- 177
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
VI + Q+G EEA+ M+ G EP++ T+++ + +CARL L G+E H +
Sbjct: 178 ----VISCYYQSGKFEEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHKEL 233
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+GF + FV LVD+Y +CG + A+
Sbjct: 234 VNSGFRMDSFVSAALVDMYGKCGQLEMAI------------------------------- 262
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
E+F+QM + + +++WNSMI+GY +F+ + +G++PT T S L+A
Sbjct: 263 EVFEQMPN----KTVVAWNSMINGYGFKGDGISCIQLFKRMY-SEGVKPTLTTLTSTLMA 317
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C+ L +GK +H I +Q D F+ +L+++Y + + +A+ F + +
Sbjct: 318 CSQSAQLLEGKFVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVESAETIFKLMPKTTTVSW 377
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
+ G+ ++A++LF EM + PD T +L+ACS LA +E+G+++H +
Sbjct: 378 NVMISGYVTEGKLFDALRLFGEMSKSFVEPDAITFTSVLAACSQLAALEKGREIHNLIVE 437
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
++ + AL+DMYAKCG+++ A +K + DLVS +M+TAY HG E +
Sbjct: 438 RNLGNNEVVMGALLDMYAKCGAVEEAFGVFKCLPERDLVSWTSMITAYGSHGRVYEALEL 497
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLLS 479
F +L S +PD ++FL+ LSAC HAG + G F+ M Y + P ++HY+C++ LL
Sbjct: 498 FAEMLQSNVKPDRVTFLAILSACSHAGLVDDGLYHFNQMINVYGIIPRIEHYSCLITLLG 557
Query: 480 RAGELGEAYEFIKKIP-MAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYV 538
RAG L EAYE ++ P ++ D + L C H NL+ G A+ LI+ +P+++ Y+
Sbjct: 558 RAGRLHEAYEILQSNPEISDDFQLLSTLFSACRLHKNLDLGVEIAENLIDKDPDDSSTYI 617
Query: 539 MLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYT 598
+L+N++A G+W ++ R KMKD + K+PGCSWIE ++I F D SH E I
Sbjct: 618 ILSNMYASFGKWDEVRMVRSKMKDLGLKKNPGCSWIEINEKIVPFFVEDNSHYHLEGIGN 677
Query: 599 II 600
I+
Sbjct: 678 IL 679
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 127/464 (27%), Positives = 219/464 (47%), Gaps = 39/464 (8%)
Query: 55 ETPNLVSW-SAVIGGFTQNGYDEEAIGMLFRMQA-EGLEPNARTLSSVLPACARLQKLSL 112
E P +S + ++ G+T+N +EA+G+ ++ L+P++ T SVL AC L+++ L
Sbjct: 65 ENPFEISLCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACGGLRRVVL 124
Query: 113 GKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCE 172
G+ H + + G M + V + LV +Y +C + A+K+F + K+ NT+I Y +
Sbjct: 125 GQMIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVISCYYQ 184
Query: 173 NGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSF 232
+G EA F M R G EP S
Sbjct: 185 SGKFEEALRYFGMMR------------------------------------RFGFEPDSV 208
Query: 233 TFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI 292
T + + +CA + L +G+EIH + G + D+FV ALV+MY + L A F+++
Sbjct: 209 TITTAISSCARLLDLDRGREIHKELVNSGFRMDSFVSAALVDMYGKCGQLEMAIEVFEQM 268
Query: 293 ENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGK 352
N + +G+ + +QLF M S + P + T+ L ACS A + GK
Sbjct: 269 PNKTVVAWNSMINGYGFKGDGISCIQLFKRMYSEGVKPTLTTLTSTLMACSQSAQLLEGK 328
Query: 353 QVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHG 412
VH Y IR D+ + ++L+D+Y KCG ++ A +K + VS N M++ Y G
Sbjct: 329 FVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVESAETIFKLMPKTTTVSWNVMISGYVTEG 388
Query: 413 HGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYT 472
+ + F + S PD I+F S L+AC +++ G E +L+ ++ +
Sbjct: 389 KLFDALRLFGEMSKSFVEPDAITFTSVLAACSQLAALEKGREIHNLIVERNLGNNEVVMG 448
Query: 473 CMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNL 516
++D+ ++ G + EA+ K +P D V W +++ SHG +
Sbjct: 449 ALLDMYAKCGAVEEAFGVFKCLP-ERDLVSWTSMITAYGSHGRV 491
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 111/424 (26%), Positives = 192/424 (45%), Gaps = 35/424 (8%)
Query: 93 NARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIF 152
+AR L +L A + L GK H + G ++ +V L+ +Y
Sbjct: 2 DARKLIPLLRASVNSKSLKQGKVLHQKVVTLGLQNDVYVCKNLISLY------------- 48
Query: 153 SKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYD 212
VSCN + Y A+ +FD +E+ I N +++GY N +YD
Sbjct: 49 --------VSCN--LFDY--------AKNVFDVIEN---PFEISLCNGLMAGYTRNCMYD 87
Query: 213 EAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGAL 272
EA +F L+ ++P S+T+ SVL AC + + G+ IH + GL D VG +L
Sbjct: 88 EALGLFDKLMCYPCLKPDSYTYPSVLKACGGLRRVVLGQMIHTCLVKEGLMVDIVVGSSL 147
Query: 273 VEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDI 332
V MY + + A FDE+ + + + + A++ F M PD
Sbjct: 148 VGMYAKCNEFECAVKLFDEMPDKDVACWNTVISCYYQSGKFEEALRYFGMMRRFGFEPDS 207
Query: 333 YTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKR 392
T+ +S+C+ L ++RG+++H + G+ D + ALVDMY KCG L+ A +++
Sbjct: 208 VTITTAISSCARLLDLDRGREIHKELVNSGFRMDSFVSAALVDMYGKCGQLEMAIEVFEQ 267
Query: 393 ISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTG 452
+ +V+ N+M+ Y G G I F+R+ + G +P + S L AC + + G
Sbjct: 268 MPNKTVVAWNSMINGYGFKGDGISCIQLFKRMYSEGVKPTLTTLTSTLMACSQSAQLLEG 327
Query: 453 SEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVS 512
+ ++P + + ++DL + G++ A K +P +V W ++ G V+
Sbjct: 328 KFVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVESAETIFKLMP-KTTTVSWNVMISGYVT 386
Query: 513 HGNL 516
G L
Sbjct: 387 EGKL 390
>gi|116310106|emb|CAH67125.1| H0315E07.3 [Oryza sativa Indica Group]
gi|222628896|gb|EEE61028.1| hypothetical protein OsJ_14863 [Oryza sativa Japonica Group]
Length = 655
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 183/601 (30%), Positives = 301/601 (50%), Gaps = 62/601 (10%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y +CG + +A+++F +P+R+ VSWN++V+ A NG+V A E + M D+ VS
Sbjct: 106 YARCGRVAEARELFNRIPDRNVVSWNAMVSGYARNGMVKRARELFDMMPWRDD-----VS 160
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W +I G+ + + EA + M + P +++L L + + G +
Sbjct: 161 WLTMISGYIKRKHVREARELFDSMPS----PPTSVCNALLSGYVELGYMRAAEVLFGQMQ 216
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
NP N ++ Y R G M A ++F + K+ +S I+ GY +NG+V A +
Sbjct: 217 TR----NPVSWNVMITGYARAGSMGIAQRLFDEMPEKDVLSRTAIMRGYLQNGSVDAAWK 272
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
+F M H R ++WN+M+ G+V N D+A +F ++ RD I
Sbjct: 273 VFKDMPH----RDTVAWNTMMDGFVRNDRLDDALKLFSEMPDRDQIS------------- 315
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK 301
A+++ Y + D+ +A F N + +
Sbjct: 316 ---------------------------WNAILQGYVQQGDMDSANAWFRRAPNKDAISWN 348
Query: 302 MKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRC 361
G++ A+ L SEM+ L PD T+ +++S C+SL ++ GK VH +AI+
Sbjct: 349 TLISGYKDE----GALSLLSEMIRGGLKPDQATLSVVISICASLVSLGCGKMVHLWAIKT 404
Query: 362 GYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHF 421
G++ D + ++L+ MY+KCG + A ++ I D V+ NAM+ YA HG E + F
Sbjct: 405 GFEHDALVMSSLISMYSKCGLISEASQVFELILQRDTVTWNAMIATYAYHGLADEALKVF 464
Query: 422 RRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSR 480
+ +GFRPDH +FLS LSAC H G + G F M +++ P HY+CMVDLL R
Sbjct: 465 DMMTKAGFRPDHATFLSILSACAHKGYLYEGCYHFRSMQEDWNLVPRSDHYSCMVDLLGR 524
Query: 481 AGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVML 540
+G + +AY+F ++IP + W L C SHG ++ G+I A +++ P++ G Y +L
Sbjct: 525 SGFIHQAYDFTRRIPSDHRTTAWETLFSVCNSHGEIQLGEIIARNVLKARPSDGGMYTLL 584
Query: 541 ANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTII 600
+N++A WS A R MK+R + K GCSWIE + E+ F ++D +H E+I +
Sbjct: 585 SNIYAAKEMWSSAASVRGFMKERGLKKETGCSWIELKGEVVTFSSNDSNHPLIEQICQEV 644
Query: 601 D 601
D
Sbjct: 645 D 645
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 90/414 (21%), Positives = 167/414 (40%), Gaps = 49/414 (11%)
Query: 128 NPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQME 187
N F N +V R + A K+F ++N VS ++ GY G VAEARELF+++
Sbjct: 64 NVFTWNCMVSGLIRNRMLAEARKVFDAMPVRNSVSWAALLTGYARCGRVAEARELFNRIP 123
Query: 188 HLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSL 247
R ++SWN+M+SGY N + A +F + RD + + G + +
Sbjct: 124 ----DRNVVSWNAMVSGYARNGMVKRARELFDMMPWRDDVSWLTMISGYI-----KRKHV 174
Query: 248 RKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGF 307
R+ +E+ + T V AL+ Y + AA++ F +++ + + G+
Sbjct: 175 REARELFDSMPS----PPTSVCNALLSGYVELGYMRAAEVLFGQMQTRNPVSWNVMITGY 230
Query: 308 EPNVYTWNAMQLFSEMLSLDLTPDIYTV------GIILSACSSLATMERGKQVHAYAIRC 361
A +LF EM D+ + G + +A M V +
Sbjct: 231 ARAGSMGIAQRLFDEMPEKDVLSRTAIMRGYLQNGSVDAAWKVFKDMPHRDTVAWNTMMD 290
Query: 362 GY-----------------DSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAM 404
G+ D D A++ Y + G + A ++R D +S N +
Sbjct: 291 GFVRNDRLDDALKLFSEMPDRDQISWNAILQGYVQQGDMDSANAWFRRAPNKDAISWNTL 350
Query: 405 LTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDV 464
++ Y G ++ ++ G +PD + +S C S+ G ++ + +
Sbjct: 351 ISGYKDEG----ALSLLSEMIRGGLKPDQATLSVVISICASLVSLGCGK----MVHLWAI 402
Query: 465 KPSLKH----YTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
K +H + ++ + S+ G + EA + + I + D+V W A++ HG
Sbjct: 403 KTGFEHDALVMSSLISMYSKCGLISEASQVFELI-LQRDTVTWNAMIATYAYHG 455
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG + +A +VF+++ +RD V+WN+++ A +GL EAL+ + M+ P+
Sbjct: 419 MYSKCGLISEASQVFELILQRDTVTWNAMIATYAYHGLADEALKVFDMMTKAGFR-PDHA 477
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE 88
++ +++ GY E MQ +
Sbjct: 478 TFLSILSACAHKGYLYEGCYHFRSMQED 505
>gi|357143522|ref|XP_003572950.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Brachypodium distachyon]
Length = 874
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 199/666 (29%), Positives = 331/666 (49%), Gaps = 110/666 (16%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG ++D + VF+ MP+R N+V
Sbjct: 144 MYMKCGGVEDGRVVFEGMPKR------------------------------------NVV 167
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W++++ G+ Q + + + FRM+AEG+ PN T +SVL A A + LG+ H
Sbjct: 168 TWTSLLTGYVQGRACSDVMALFFRMRAEGVWPNPFTFTSVLSAVASQGAVDLGRRVHAQS 227
Query: 121 TRNGFMSNPFVVNGLVDVYRRCG---------------DMLS----------------AL 149
+ G S FV N L+++Y +CG DM+S AL
Sbjct: 228 VKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQMETRDMVSWNTLMAGLLLNEHQLEAL 287
Query: 150 KIF--SKFSI-KNEVSCNTIIVGYCEN----------------------GNV-------- 176
++F S+ S+ K S + ++ C N GNV
Sbjct: 288 QLFHDSRASMAKLSQSTYSTVIKLCANLKQLALARQLHSCVLKHGFHSDGNVMTAIMDAY 347
Query: 177 ---AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFT 233
E + F+ + + ++SW +MI G + N+ A ++F + D ++P FT
Sbjct: 348 SKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALF-SRMREDNVKPNEFT 406
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
+ +VL A + +IHA I Q VG AL+ Y + + A F I+
Sbjct: 407 YSTVLTASIPILL----PQIHAQIIKTNYQHAPSVGTALLASYSKLGNTEEALSIFKMID 462
Query: 294 NIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSS-LATMERGK 352
+ + + + A +F +M + P+ +T+ + AC+S A +++G+
Sbjct: 463 HKDVVAWSAMLSCYSQAGDCDGATNVFIKMSMQGMKPNEFTISSAIDACASPTAGIDQGR 522
Query: 353 QVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHG 412
Q HA +I+ Y + +G+ALV MYA+ GS+ AR+ ++R + DLVS N+M++ YA HG
Sbjct: 523 QFHAISIKYRYQDAICVGSALVTMYARKGSIDSARIVFERQTDRDLVSWNSMISGYAQHG 582
Query: 413 HGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHY 471
+ KE + FR++ G D +FL+ + C HAG +K G ++FD M +++ P+++HY
Sbjct: 583 YSKEALDTFRQMETVGIEMDGATFLAVIVGCTHAGLVKEGQQYFDSMVMDHNISPTMEHY 642
Query: 472 TCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEP 531
+CMVDL SRAG+L E I+ +P +++W LLG C H N+E G++AA +L+ LEP
Sbjct: 643 SCMVDLYSRAGKLDETMNLIEGMPFPAGAMVWRTLLGACRVHKNVELGKLAAQKLLLLEP 702
Query: 532 NNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHD 591
+++ YV+L+N++A AGRW + R+ M +++ K GCSWI+ ++++H F A D+SH
Sbjct: 703 DDSATYVLLSNIYAAAGRWKERDEVRKLMDSKKVKKEAGCSWIQIKNKVHSFIACDKSHP 762
Query: 592 RSEEIY 597
SE+IY
Sbjct: 763 LSEQIY 768
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 100/378 (26%), Positives = 176/378 (46%), Gaps = 29/378 (7%)
Query: 140 RRCGDMLSALKIFSKFSIKNEVSCNTIIVG-YCENGNVAEARELFDQMEHLGVQRGIISW 198
R G+ L L + F + EV T +V Y + G V + R +F+ M +R +++W
Sbjct: 115 RVSGEQLHCLCVKCGFD-RAEVGVGTALVDMYMKCGGVEDGRVVFEGMP----KRNVVTW 169
Query: 199 NSMISGYVDNSLYDEAFSMFRDLLMR-DGIEPTSFTFGSVLIACADMNSLRKGKEIHALA 257
S+++GYV + ++F MR +G+ P FTF SVL A A ++ G+ +HA +
Sbjct: 170 TSLLTGYVQGRACSDVMALF--FRMRAEGVWPNPFTFTSVLSAVASQGAVDLGRRVHAQS 227
Query: 258 IALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAM 317
+ G +S FV +L+ MY + + A+ F ++E + + G N + A+
Sbjct: 228 VKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQMETRDMVSWNTLMAGLLLNEHQLEAL 287
Query: 318 QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMY 377
QLF + + T ++ C++L + +Q+H+ ++ G+ SD ++ TA++D Y
Sbjct: 288 QLFHDSRASMAKLSQSTYSTVIKLCANLKQLALARQLHSCVLKHGFHSDGNVMTAIMDAY 347
Query: 378 AKCGSLKHARLAYKRIS-TPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISF 436
+KCG L A + + + ++VS AM+ + A F R+ +P+ ++
Sbjct: 348 SKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRMREDNVKPNEFTY 407
Query: 437 LSALSAC-------VHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYE 489
+ L+A +HA IKT Y PS+ T ++ S+ G EA
Sbjct: 408 STVLTASIPILLPQIHAQIIKTN---------YQHAPSVG--TALLASYSKLGNTEEALS 456
Query: 490 FIKKIPMAPDSVMWGALL 507
K I D V W A+L
Sbjct: 457 IFKMIDH-KDVVAWSAML 473
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 152/311 (48%), Gaps = 4/311 (1%)
Query: 237 VLIACADMNSLRKGKEIHALAIALGL-QSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
VL C + G+++H L + G +++ VG ALV+MY + + ++ F+ +
Sbjct: 105 VLKVCGLIPDRVSGEQLHCLCVKCGFDRAEVGVGTALVDMYMKCGGVEDGRVVFEGMPKR 164
Query: 296 ENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVH 355
+ G+ + M LF M + + P+ +T +LSA +S ++ G++VH
Sbjct: 165 NVVTWTSLLTGYVQGRACSDVMALFFRMRAEGVWPNPFTFTSVLSAVASQGAVDLGRRVH 224
Query: 356 AYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGK 415
A +++ G S V + +L++MY+KCG ++ A+ ++++ T D+VS N ++ ++ H
Sbjct: 225 AQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQMETRDMVSWNTLMAGLLLNEHQL 284
Query: 416 EGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMV 475
E + F AS + ++ + + C + + + + + T ++
Sbjct: 285 EALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLALARQLHSCVLKHGFHSDGNVMTAIM 344
Query: 476 DLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIE--LEPNN 533
D S+ GEL +A+ +P + + V W A++GGC+ + ++ R+ E ++PN
Sbjct: 345 DAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRMREDNVKPNE 404
Query: 534 -TGNYVMLANL 543
T + V+ A++
Sbjct: 405 FTYSTVLTASI 415
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 107/226 (47%), Gaps = 6/226 (2%)
Query: 335 VGIILSACSSLATMERGKQVHAYAIRCGYD-SDVHIGTALVDMYAKCGSLKHARLAYKRI 393
V +L C + G+Q+H ++CG+D ++V +GTALVDMY KCG ++ R+ ++ +
Sbjct: 102 VSRVLKVCGLIPDRVSGEQLHCLCVKCGFDRAEVGVGTALVDMYMKCGGVEDGRVVFEGM 161
Query: 394 STPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGS 453
++V+ ++LT Y + +A F R+ A G P+ +F S LSA G++ G
Sbjct: 162 PKRNVVTWTSLLTGYVQGRACSDVMALFFRMRAEGVWPNPFTFTSVLSAVASQGAVDLGR 221
Query: 454 EFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG-CVS 512
+ + ++ ++++ S+ G + EA +++ D V W L+ G ++
Sbjct: 222 RVHAQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQME-TRDMVSWNTLMAGLLLN 280
Query: 513 HGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQ 558
LE Q+ D + + Y + L A LA RQ
Sbjct: 281 EHQLEALQLFHDSRASMAKLSQSTYSTVIKLCA---NLKQLALARQ 323
>gi|347954458|gb|AEP33729.1| chlororespiratory reduction 21, partial [Brassica rapa]
Length = 788
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 205/673 (30%), Positives = 327/673 (48%), Gaps = 150/673 (22%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKCG LDDA+KVF +PER N+V
Sbjct: 173 MYGKCGVLDDARKVFDEIPER------------------------------------NVV 196
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+A++ G+ QNG +EEAI ++ M+ EG+EP T+S+ L A A + + GK+ H
Sbjct: 197 AWNALMVGYVQNGMNEEAIRLMCDMREEGVEPTRVTVSTCLSASANMGGVEEGKQSHALA 256
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
VVNGL + N + +++ YC+ G V A
Sbjct: 257 ----------VVNGL--------------------ELDN-ILGTSVLNFYCKVGLVEYAE 285
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMR-DGIEPTSFTFGSVLI 239
+FD+M V + +++WN +ISGYV L ++A M + LMR + ++ T +++
Sbjct: 286 MVFDRM----VGKDVVTWNLLISGYVQQGLVEDAIRMCK--LMRLEKLKFDCVTLSTLMS 339
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE--- 296
A + + GKE+ I +SD + V+MY + +V A+ FD +
Sbjct: 340 TAARTQNSKLGKEVQCYCIRHSFESDIVLASTAVDMYAKCGSIVDAKKVFDSTVQKDLIL 399
Query: 297 ------------------NLLGKMKEDGFEPNVYTWN--------------AMQLFSEML 324
L +M+ + PNV TWN A ++F +M
Sbjct: 400 WNTLLAAYAESGLSGEALRLFYEMQLESVPPNVITWNLIILSLLRNGQVDEAKKMFLQMQ 459
Query: 325 S-----------------------------------LDLTPDIYTVGIILSACSSLATME 349
S + P+++++ + LSAC++LA++
Sbjct: 460 SSGIVPTIVSWTTMMNGLVQNGCSEEAIHYLRKMQEYGMRPNVFSITVALSACANLASLH 519
Query: 350 RGKQVHAYAIRCG-YDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAY 408
G+ VH Y IR + S V I T+LVDMYAKCG + A ++R +L NAM++AY
Sbjct: 520 FGRSVHGYIIRNRLHSSSVSIETSLVDMYAKCGDISKAEKVFRRKLFSELPLYNAMISAY 579
Query: 409 AMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFF-DLMAYYDVKPS 467
A++G+ +E +A +R + G +PD+I+F + LSAC HAG I E F D+++ + VKP
Sbjct: 580 ALYGNVEEAMALYRSLDDMGIKPDNITFTNILSACNHAGDINQAIEIFSDMVSKHGVKPC 639
Query: 468 LKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLI 527
L+HY MVDLL+ AGE +A ++++P PD+ M +LL C E + + +L+
Sbjct: 640 LEHYGLMVDLLASAGETEKALRLMEEMPYEPDARMIQSLLATCNKEHKTELVEYLSKQLL 699
Query: 528 ELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDR----DEIHKF 583
E EP+N+GNYV ++N +A G W ++ + R+ MK + + K PGCSWI + +E+ F
Sbjct: 700 ESEPDNSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKQPGCSWIRVKREEEEEVQVF 759
Query: 584 RASDRSHDRSEEI 596
A+D++H R+ EI
Sbjct: 760 VANDKTHLRNNEI 772
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 130/517 (25%), Positives = 234/517 (45%), Gaps = 44/517 (8%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
N+ SW+A+IG + G E A+ M + + P+ + +V AC LQ G+ H
Sbjct: 93 NVFSWAAIIGVKCRMGLVEGALMGFVEMLKDEIFPDNFVVPNVCKACGALQWRGFGRGVH 152
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
GY+ ++G FV + L D+Y +CG + A K+F + +N V+ N ++VGY +NG
Sbjct: 153 GYVAKSGLDDCVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGYVQNGMNE 212
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
EA L M +G+EPT T +
Sbjct: 213 EAIRLMCDMRE------------------------------------EGVEPTRVTVSTC 236
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
L A A+M + +GK+ HALA+ GL+ D +G +++ YC+ + A+M FD + +
Sbjct: 237 LSASANMGGVEEGKQSHALAVVNGLELDNILGTSVLNFYCKVGLVEYAEMVFDRMVGKDV 296
Query: 298 LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAY 357
+ + G+ +A+++ M L D T+ ++S + + GK+V Y
Sbjct: 297 VTWNLLISGYVQQGLVEDAIRMCKLMRLEKLKFDCVTLSTLMSTAARTQNSKLGKEVQCY 356
Query: 358 AIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEG 417
IR ++SD+ + + VDMYAKCGS+ A+ + DL+ N +L AYA G E
Sbjct: 357 CIRHSFESDIVLASTAVDMYAKCGSIVDAKKVFDSTVQKDLILWNTLLAAYAESGLSGEA 416
Query: 418 IAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDL 477
+ F + P+ I++ + + + G + + F M + P++ +T M++
Sbjct: 417 LRLFYEMQLESVPPNVITWNLIILSLLRNGQVDEAKKMFLQMQSSGIVPTIVSWTTMMNG 476
Query: 478 LSRAGELGEAYEFIKKIP---MAPDSVMWGALLGGCVSHGNLEFGQIAADRLI--ELEPN 532
L + G EA +++K+ M P+ L C + +L FG+ +I L +
Sbjct: 477 LVQNGCSEEAIHYLRKMQEYGMRPNVFSITVALSACANLASLHFGRSVHGYIIRNRLHSS 536
Query: 533 NTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSP 569
+ L +++A G D+++ + + + + P
Sbjct: 537 SVSIETSLVDMYAKCG---DISKAEKVFRRKLFSELP 570
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 91/203 (44%), Gaps = 7/203 (3%)
Query: 316 AMQLFSEM--LSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCG--YDSDVHIGT 371
A+ L +EM ++ + P+IY G IL C G+Q+HA ++ G Y + +I T
Sbjct: 10 ALSLVTEMDFRNVRIGPEIY--GEILQGCVYERDFHTGQQIHARILKNGDFYAKNEYIET 67
Query: 372 ALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRP 431
LV YAKC +L+ A + + ++ ++ S A++ G + + F +L P
Sbjct: 68 KLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRMGLVEGALMGFVEMLKDEIFP 127
Query: 432 DHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFI 491
D+ + AC G +A + + + + D+ + G L +A +
Sbjct: 128 DNFVVPNVCKACGALQWRGFGRGVHGYVAKSGLDDCVFVASSLADMYGKCGVLDDARKVF 187
Query: 492 KKIPMAPDSVMWGALLGGCVSHG 514
+IP + V W AL+ G V +G
Sbjct: 188 DEIP-ERNVVAWNALMVGYVQNG 209
>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Cucumis sativus]
Length = 1573
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 181/579 (31%), Positives = 303/579 (52%), Gaps = 45/579 (7%)
Query: 27 NSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQ 86
NS++ + G+V A + LD L+SW+ +I + QN + EAI +
Sbjct: 933 NSLMNMYSKAGVVYAAEKTFINSPELD-----LISWNTMISSYAQNNLEMEAICTFRDLL 987
Query: 87 AEGLEPNARTLSSVLPACA---RLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCG 143
+GL+P+ TL+SVL AC+ + +LG + H Y + G +++ FV L+D+Y + G
Sbjct: 988 RDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGG 1047
Query: 144 DMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMIS 203
M A +F + + FD + SWN+++
Sbjct: 1048 KMDEA-----EFLLHGKYD--------------------FD----------LASWNAIMF 1072
Query: 204 GYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQ 263
GY+ ++ +A F L+ GI T + + A + +L++GK+I A AI LG
Sbjct: 1073 GYIKSNKSRKALEHF-SLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFN 1131
Query: 264 SDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEM 323
+D +V +++MY + D+ A F EI + + G+ N +A+ ++ M
Sbjct: 1132 NDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLM 1191
Query: 324 LSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSL 383
+ PD YT ++ A S L +E+GKQ+HA ++ Y D +GT+LVDMY KCGS+
Sbjct: 1192 RVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSV 1251
Query: 384 KHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSAC 443
+ A ++++ +V NAML A HGH E + FR + ++G +PD ++F+ LSAC
Sbjct: 1252 QDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSAC 1311
Query: 444 VHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVM 502
H+G ++FD M Y + P ++HY+C+VD L RAG + EA I +P + M
Sbjct: 1312 SHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASM 1371
Query: 503 WGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKD 562
+ ALLG C + G+ E + AD+L+ L+P+++ YV+L+N++A + +W D+ R MK
Sbjct: 1372 YRALLGACRTKGDAETAKRVADKLLALDPSDSSAYVLLSNIYAASRQWDDVTDARNMMKL 1431
Query: 563 RRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
+ + K PG SWI+ ++++H F DRSH ++ IY I+
Sbjct: 1432 KNVKKDPGFSWIDVKNKVHLFVVDDRSHPQASLIYEKIE 1470
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 139/560 (24%), Positives = 223/560 (39%), Gaps = 79/560 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGSL A++VF +RD V+WNS++ A A D+
Sbjct: 655 MYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYAQFA---------------DS------ 693
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
S+ V+ GF LF + E G TL+ +L C + + + HGY
Sbjct: 694 SYENVLEGFR-----------LFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGY 742
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ GF + FV LV++Y + G + A +F K ++ V N ++ Y EN EA
Sbjct: 743 AVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEA 802
Query: 180 RELFDQMEHLGV-----------------------------------------QRGIISW 198
F G I +W
Sbjct: 803 LRFFSAFHRSGFFPDFSNLHCVIGGVNSDVSNNRKRHAEQVKAYAMKMFPFDQGSNIFAW 862
Query: 199 NSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAI 258
N ++ ++ A F+ LL R I S T +L A + L G++IHAL I
Sbjct: 863 NKKLTEFLHAGQIVAAIDCFKTLL-RSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVI 921
Query: 259 ALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQ 318
V +L+ MY + + AA+ F ++ + + N A+
Sbjct: 922 KSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAIC 981
Query: 319 LFSEMLSLDLTPDIYTVGIILSACSSLATMER---GKQVHAYAIRCGYDSDVHIGTALVD 375
F ++L L PD +T+ +L ACS+ E G QVH YAI+CG +D + TAL+D
Sbjct: 982 TFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALID 1041
Query: 376 MYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHIS 435
+Y+K G + A DL S NA++ Y ++ + HF + G D I+
Sbjct: 1042 LYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEIT 1101
Query: 436 FLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIP 495
+A+ A ++K G + L + ++D+ + G++ A E +I
Sbjct: 1102 LATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEIS 1161
Query: 496 MAPDSVMWGALLGGCVSHGN 515
PD V W ++ G + +G+
Sbjct: 1162 R-PDEVAWTTMISGYIENGD 1180
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/422 (21%), Positives = 170/422 (40%), Gaps = 64/422 (15%)
Query: 107 LQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTI 166
+ L LGK H I +G + + ++ N L+ +Y +CG + SA ++F K S ++ V+ N+I
Sbjct: 624 MADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSI 683
Query: 167 IVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDG 226
+ Y + + S+ +++ G+ F + R+ G
Sbjct: 684 LAAYAQFADS--------------------SYENVLEGF-------RLFGLLREF----G 712
Query: 227 IEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQ 286
T T +L C ++ + +H A+ +G + D FV GALV +YC+Y + A+
Sbjct: 713 FSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQAR 772
Query: 287 MAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLA 346
+ FD++ + +L + + N + A++ FS PD + ++ +S
Sbjct: 773 LLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSAFHRSGFFPDFSNLHCVIGGVNSDV 832
Query: 347 TMERGK---QVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNA 403
+ R + QV AYA++ + ++ + N
Sbjct: 833 SNNRKRHAEQVKAYAMKM----------------------------FPFDQGSNIFAWNK 864
Query: 404 MLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYD 463
LT + G I F+ +L S D ++ + LSA V A + G + L+
Sbjct: 865 KLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSS 924
Query: 464 VKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAA 523
P + ++++ S+AG + A + P D + W ++ + NLE I
Sbjct: 925 FAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPEL-DLISWNTMI-SSYAQNNLEMEAICT 982
Query: 524 DR 525
R
Sbjct: 983 FR 984
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 91/202 (45%), Gaps = 14/202 (6%)
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIEN---- 294
IA AD L+ GK HA + G D ++ L+ MY + L +A+ FD+ +
Sbjct: 622 IAMAD---LKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLV 678
Query: 295 ----IENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMER 350
I + + +E NV +LF + + T+ +L C ++
Sbjct: 679 TWNSILAAYAQFADSSYE-NVL--EGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQV 735
Query: 351 GKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAM 410
+ VH YA++ G++ D+ + ALV++Y K G + ARL + ++ D V N ML AY
Sbjct: 736 SETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVE 795
Query: 411 HGHGKEGIAHFRRILASGFRPD 432
+ E + F SGF PD
Sbjct: 796 NSFQDEALRFFSAFHRSGFFPD 817
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 72/156 (46%), Gaps = 5/156 (3%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGS+ DA +VF+ M R V WN+++ A +G V EAL M S + P+ V
Sbjct: 1244 MYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQS-NGIQPDKV 1302
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRM-QAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
++ V+ + +G EA M + G+ P S ++ A R ++ +E
Sbjct: 1303 TFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRI---QEAENV 1359
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKF 155
I F ++ + L+ R GD +A ++ K
Sbjct: 1360 IASMPFKASASMYRALLGACRTKGDAETAKRVADKL 1395
>gi|297743497|emb|CBI36364.3| unnamed protein product [Vitis vinifera]
Length = 832
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 187/615 (30%), Positives = 300/615 (48%), Gaps = 126/615 (20%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC + KVF M ER+ V+WNS+++A A
Sbjct: 219 MYAKCDDEESCLKVFDEMGERNQVTWNSIISAEA-------------------------- 252
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQ--AEGLEPNARTLSSVLPACARLQKLSLGKEFHG 118
Q G+ +A+ + RMQ +G++P+ T +++L CA + + G++ H
Sbjct: 253 ----------QFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHA 302
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
++ R N V LV +Y CG + A +IF++ + +N S N++I GY +NG E
Sbjct: 303 HLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQE 362
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
A LF QM+ G++ P F+ S+L
Sbjct: 363 ALRLFKQMQLNGIK------------------------------------PDCFSLSSML 386
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
+C ++ +KG+E+H + ++ + + LV+MY + + A +D+
Sbjct: 387 SSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQT------ 440
Query: 299 LGKMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSS 344
+K+D N WN++ F EML D+ D+ T+ I+ +
Sbjct: 441 ---IKKDR---NTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIV----N 490
Query: 345 LATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAM 404
L +E TALVDMY+KCG++ AR + ++ ++VS NAM
Sbjct: 491 LLVLE---------------------TALVDMYSKCGAITKARTVFDNMNGKNIVSWNAM 529
Query: 405 LTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YD 463
++ Y+ HG KE + + + G P+ ++FL+ LSAC H G ++ G F M Y+
Sbjct: 530 ISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYN 589
Query: 464 VKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAA 523
++ +HYTCMVDLL RAG L +A EF++K+P+ P+ WGALLG C H +++ G++AA
Sbjct: 590 IEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMDMGRLAA 649
Query: 524 DRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKF 583
RL EL+P N G YV+++N++A AGRW ++ RQ MK + + K PG SWIE EI F
Sbjct: 650 QRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVSWIEINSEIQIF 709
Query: 584 RASDRSHDRSEEIYT 598
A ++H ++EEIY
Sbjct: 710 HAGSKTHPKTEEIYN 724
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 154/583 (26%), Positives = 252/583 (43%), Gaps = 100/583 (17%)
Query: 1 MYGKCGSLDD---AKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETP 57
+Y + G LDD A+K+F+ MPER
Sbjct: 115 LYARSGCLDDLCYARKLFEEMPER------------------------------------ 138
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
NL +W+ +I + + EA G+ RM G+ P+ T +S L C L+ GK+ H
Sbjct: 139 NLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVH 198
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
+ GF + FV N L+D+Y +C D S LK+F + +N+V+ N+II + G+
Sbjct: 199 SKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFN 258
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
+A LF +M+ DGI+P FTF ++
Sbjct: 259 DALVLFLRMQE----------------------------------SEDGIQPDQFTFTTL 284
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
L CA+ + +G++IHA I + + V LV MY L A+ F+ +
Sbjct: 285 LTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNA 344
Query: 298 LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAY 357
+G++ N T A++LF +M + PD +++ +LS+C SL+ ++G+++H +
Sbjct: 345 YSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNF 404
Query: 358 AIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQ--NAMLTAYAMHGHGK 415
+R + + + LVDMYAKCGS+ +A Y + D + N++L YA G K
Sbjct: 405 IVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDRNTALWNSILAGYANKGLKK 464
Query: 416 EGIAHFRRILASGFRPDHISFLSALSACV----------HAGSIKTGSEFFDLMAYYDVK 465
E HF +L S D ++ ++ ++ V G+I FD M
Sbjct: 465 ESFNHFLEMLESDIEYDVLTMVTIVNLLVLETALVDMYSKCGAITKARTVFDNMN----G 520
Query: 466 PSLKHYTCMVDLLSRAGELGEA---YEFIKKIPMAPDSVMWGALLGGCVSHGNLE----- 517
++ + M+ S+ G EA YE + K M P+ V + A+L C G +E
Sbjct: 521 KNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRI 580
Query: 518 FGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKM 560
F + D IE + +Y + +L AGR D +KM
Sbjct: 581 FTSMQEDYNIEAKAE---HYTCMVDLLGRAGRLEDAKEFVEKM 620
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 124/482 (25%), Positives = 219/482 (45%), Gaps = 72/482 (14%)
Query: 56 TPNLVSWSAVIGGFTQ------NGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQK 109
PN S+SA G T NG D + A + P SS++ C
Sbjct: 29 NPNSKSFSAHFGHTTTTIKLKFNGPDSPKPTSIHTKPASDVNP--LPYSSLIQDCIDSNS 86
Query: 110 LSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVG 169
GK H + NG+ + +++ ++ +Y R G +
Sbjct: 87 FQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCL------------------------ 122
Query: 170 YCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEP 229
++ AR+LF++M +R + +WN+MI Y Y EA+ +F D +++ G+ P
Sbjct: 123 ----DDLCYARKLFEEMP----ERNLTAWNTMILAYARVDDYMEAWGIF-DRMLKIGVCP 173
Query: 230 TSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAF 289
+FTF S L C + S GK++H+ IA G + DTFVG AL++MY + D + F
Sbjct: 174 DNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVF 233
Query: 290 DEIENIENLLGKMKEDGFEPNVYTWN--------------AMQLFSEMLSLD--LTPDIY 333
DE+ E N TWN A+ LF M + + PD +
Sbjct: 234 DEMG--------------ERNQVTWNSIISAEAQFGHFNDALVLFLRMQESEDGIQPDQF 279
Query: 334 TVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRI 393
T +L+ C++ +G+Q+HA+ IR ++ + T LV MY++CG L +A+ + R+
Sbjct: 280 TFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRM 339
Query: 394 STPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGS 453
+ + S N+M+ Y +G +E + F+++ +G +PD S S LS+CV + G
Sbjct: 340 AERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGR 399
Query: 454 EFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYE-FIKKIPMAPDSVMWGALLGGCVS 512
E + + ++ +VD+ ++ G + A++ + + I ++ +W ++L G +
Sbjct: 400 ELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDRNTALWNSILAGYAN 459
Query: 513 HG 514
G
Sbjct: 460 KG 461
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 138/303 (45%), Gaps = 34/303 (11%)
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCR---YQDLVAAQMAFD 290
+ S++ C D NS ++GK IH I+ G D ++ ++ +Y R DL A+ F+
Sbjct: 74 YSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFE 133
Query: 291 EIENIENLLGKMKEDGFEPNVYTWNAMQL--------------FSEMLSLDLTPDIYTVG 336
E+ E N+ WN M L F ML + + PD +T
Sbjct: 134 EMP--------------ERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFA 179
Query: 337 IILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTP 396
L C +L + + GKQVH+ I CG+ D +G AL+DMYAKC + + +
Sbjct: 180 SALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGER 239
Query: 397 DLVSQNAMLTAYAMHGHGKEGIAHFRRILAS--GFRPDHISFLSALSACVHAGSIKTGSE 454
+ V+ N++++A A GH + + F R+ S G +PD +F + L+ C + + G +
Sbjct: 240 NQVTWNSIISAEAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQ 299
Query: 455 FFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
+ ++ ++ T +V + S G L A E ++ ++ W +++ G +G
Sbjct: 300 IHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMA-ERNAYSWNSMIEGYQQNG 358
Query: 515 NLE 517
+
Sbjct: 359 ETQ 361
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 115/279 (41%), Gaps = 46/279 (16%)
Query: 327 DLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLK-- 384
D+ P Y+ ++ C + +RGK +H I GY+ D ++ T ++ +YA+ G L
Sbjct: 68 DVNPLPYSS--LIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDL 125
Query: 385 -HARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSAC 443
+AR ++ + +L + N M+ AYA E F R+L G PD+ +F SAL C
Sbjct: 126 CYARKLFEEMPERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRVC 185
Query: 444 -----------VHA--------GSIKTGSEFFDLMAYYDVKPS-LK-----------HYT 472
VH+ G G+ D+ A D + S LK +
Sbjct: 186 GALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWN 245
Query: 473 CMVDLLSRAGELGEAYEFIKKIP-----MAPDSVMWGALLGGCVSHGNLEFGQIAADRLI 527
++ ++ G +A ++ + PD + LL C + N G+ LI
Sbjct: 246 SIISAEAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLI 305
Query: 528 ELEPNNTGNYVM---LANLFAYAGRWSDLARTRQKMKDR 563
N T N ++ L ++++ GR + +M +R
Sbjct: 306 --RANITKNIIVETELVHMYSECGRLNYAKEIFNRMAER 342
>gi|326504202|dbj|BAJ90933.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 634
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 190/605 (31%), Positives = 302/605 (49%), Gaps = 67/605 (11%)
Query: 29 VVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAE 88
V + CA +G + C R P+ +++++I ++ +G +EA+ + +
Sbjct: 42 VASYCALSGRAGDVALCHARRMFDRVPDPDRFAYNSLIRAYSNSGCPQEALCLHRDVLRR 101
Query: 89 GLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSA 148
G+ PN TL VL AC+R + HG + G++ FV N L+
Sbjct: 102 GILPNEFTLPFVLKACSRARAAEHALATHGVAIKLGYVRQVFVGNALLH----------- 150
Query: 149 LKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDN 208
G++ ++R LF +M R ++SWN+MI G
Sbjct: 151 --------------------SSASAGSLRDSRRLFAEM---APHRNVVSWNTMIGGCAQA 187
Query: 209 SLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFV 268
EA ++FR++ R G+ FTF S+L+ C+ +L G+ +H +A G + D +
Sbjct: 188 GETSEACALFREM-RRQGVLADVFTFVSLLLVCSKEGNLEVGRLVHCHMLASGSRVDLIL 246
Query: 269 GGALVEMYCRYQDLVAAQMAFD--EIENI---ENLLGKMKEDGF------------EPNV 311
G ALV+MY + DL A FD I+N+ ++L + + G E N+
Sbjct: 247 GNALVDMYGKCGDLWMAHRCFDVMPIKNVVSWTSMLCALAKHGSVDAARDWFEQMPERNI 306
Query: 312 YTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAY 357
+WNAM L++ M SL LTPD T+ +LS + G+ +H Y
Sbjct: 307 ISWNAMISCYVQGGRFPETLGLYNRMKSLGLTPDEVTLAGVLSVHGQNGDLASGRMIHCY 366
Query: 358 AIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEG 417
D V + +L+DMYA+CG + + + + + +S N ++ A AMHG +E
Sbjct: 367 IQDSFSDPGVTVLNSLIDMYARCGQVDTSISLFTEMPNKNTISWNVIIGALAMHGRAQEA 426
Query: 418 IAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVD 476
+ FR +++ F PD I+F+ LSAC H G ++ G +F M + Y+VKP ++HY CMVD
Sbjct: 427 VMFFRAMVSDAFSPDEITFVGLLSACSHGGLLEDGQYYFKAMRHIYNVKPEVEHYACMVD 486
Query: 477 LLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGN 536
LL R G L +A + IK +PM PD V+WGAL+G C HG++E G++A +L+ELE N G
Sbjct: 487 LLGRHGHLAKAVDLIKDMPMKPDVVVWGALIGACRIHGHVEIGKLAIKQLLELEGINGGL 546
Query: 537 YVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEI 596
+V+++NL +W D+ R R+ M+DR K G S IE + IH+F D H+ S +I
Sbjct: 547 FVLISNLLYETRQWEDMKRLRKLMRDRGTKKDMGVSSIEINNSIHEFGVEDIRHESSSQI 606
Query: 597 YTIID 601
Y +D
Sbjct: 607 YAAVD 611
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 99/390 (25%), Positives = 165/390 (42%), Gaps = 44/390 (11%)
Query: 166 IIVGYC----ENGNVA--EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFR 219
++ YC G+VA AR +FD++ ++NS+I Y ++ EA + R
Sbjct: 41 LVASYCALSGRAGDVALCHARRMFDRVP----DPDRFAYNSLIRAYSNSGCPQEALCLHR 96
Query: 220 DLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRY 279
D+L R GI P FT VL AC+ + H +AI LG FVG AL+
Sbjct: 97 DVL-RRGILPNEFTLPFVLKACSRARAAEHALATHGVAIKLGYVRQVFVGNALLHSSASA 155
Query: 280 QDLVAAQMAFDEIENIENLLG-KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGII 338
L ++ F E+ N++ G T A LF EM + D++T +
Sbjct: 156 GSLRDSRRLFAEMAPHRNVVSWNTMIGGCAQAGETSEACALFREMRRQGVLADVFTFVSL 215
Query: 339 LSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSL--------------- 383
L CS +E G+ VH + + G D+ +G ALVDMY KCG L
Sbjct: 216 LLVCSKEGNLEVGRLVHCHMLASGSRVDLILGNALVDMYGKCGDLWMAHRCFDVMPIKNV 275
Query: 384 -----------KH-----ARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILAS 427
KH AR ++++ +++S NAM++ Y G E + + R+ +
Sbjct: 276 VSWTSMLCALAKHGSVDAARDWFEQMPERNIISWNAMISCYVQGGRFPETLGLYNRMKSL 335
Query: 428 GFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEA 487
G PD ++ LS G + +G + P + ++D+ +R G++ +
Sbjct: 336 GLTPDEVTLAGVLSVHGQNGDLASGRMIHCYIQDSFSDPGVTVLNSLIDMYARCGQVDTS 395
Query: 488 YEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
++P +++ W ++G HG +
Sbjct: 396 ISLFTEMP-NKNTISWNVIIGALAMHGRAQ 424
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 145/303 (47%), Gaps = 10/303 (3%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKCG L A + F +MP ++ VSW S++ A A +G V A + E+M N++
Sbjct: 253 MYGKCGDLWMAHRCFDVMPIKNVVSWTSMLCALAKHGSVDAARDWFEQMPE-----RNII 307
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A+I + Q G E +G+ RM++ GL P+ TL+ VL + L+ G+ H YI
Sbjct: 308 SWNAMISCYVQGGRFPETLGLYNRMKSLGLTPDEVTLAGVLSVHGQNGDLASGRMIHCYI 367
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ V+N L+D+Y RCG + +++ +F++ KN +S N II +G EA
Sbjct: 368 QDSFSDPGVTVLNSLIDMYARCGQVDTSISLFTEMPNKNTISWNVIIGALAMHGRAQEAV 427
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
F M I++ ++S L ++ F+ + ++P + ++
Sbjct: 428 MFFRAMVSDAFSPDEITFVGLLSACSHGGLLEDGQYYFKAMRHIYNVKPEVEHYACMVDL 487
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVA-AQMAFDEIENIENLL 299
L K + L + ++ D V GAL+ CR V ++A ++ +E +
Sbjct: 488 LGRHGHLAKAVD---LIKDMPMKPDVVVWGALIGA-CRIHGHVEIGKLAIKQLLELEGIN 543
Query: 300 GKM 302
G +
Sbjct: 544 GGL 546
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 139/323 (43%), Gaps = 11/323 (3%)
Query: 246 SLRKGKEIHALAIALGLQSDTFVGGALVEMYC----RYQD--LVAAQMAFDEIENIENLL 299
S+R ++HA +A G + V LV YC R D L A+ FD + + +
Sbjct: 15 SIRHLDQLHAHLLAHGPSAVASVVPQLVASYCALSGRAGDVALCHARRMFDRVPDPDRFA 74
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
+ + A+ L ++L + P+ +T+ +L ACS E H AI
Sbjct: 75 YNSLIRAYSNSGCPQEALCLHRDVLRRGILPNEFTLPFVLKACSRARAAEHALATHGVAI 134
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTP-DLVSQNAMLTAYAMHGHGKEGI 418
+ GY V +G AL+ A GSL+ +R + ++ ++VS N M+ A G E
Sbjct: 135 KLGYVRQVFVGNALLHSSASAGSLRDSRRLFAEMAPHRNVVSWNTMIGGCAQAGETSEAC 194
Query: 419 AHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLL 478
A FR + G D +F+S L C G+++ G M + L +VD+
Sbjct: 195 ALFREMRRQGVLADVFTFVSLLLVCSKEGNLEVGRLVHCHMLASGSRVDLILGNALVDMY 254
Query: 479 SRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYV 538
+ G+L A+ +P+ + V W ++L HG+++ A D ++ N ++
Sbjct: 255 GKCGDLWMAHRCFDVMPI-KNVVSWTSMLCALAKHGSVD---AARDWFEQMPERNIISWN 310
Query: 539 MLANLFAYAGRWSDLARTRQKMK 561
+ + + GR+ + +MK
Sbjct: 311 AMISCYVQGGRFPETLGLYNRMK 333
>gi|357510605|ref|XP_003625591.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500606|gb|AES81809.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 887
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 186/589 (31%), Positives = 295/589 (50%), Gaps = 60/589 (10%)
Query: 24 VSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLF 83
S N++++ G + A R+ T +L+SW +I G+ Q GY EA+ +
Sbjct: 296 TSQNALISMYTNFGQIEHASNVFTRI-----PTKDLISWGTMITGYIQLGYRVEALYLFR 350
Query: 84 RMQAEG-LEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRC 142
+ +G +PN SV AC+ L +L GK+ HG + G N F L D+Y +
Sbjct: 351 DLLRQGTYQPNEFIFGSVFSACSSLLELEYGKQVHGMCVKFGLRRNVFAGCSLCDMYAKF 410
Query: 143 GDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMI 202
G + SA F + IKN I+SWN++I
Sbjct: 411 GFLPSAKMAFCQ--IKNP---------------------------------DIVSWNAII 435
Query: 203 SGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGL 262
+ + DN +EA FR ++ G+ P S T+ S+L C L +G++IH+ + +G
Sbjct: 436 AAFADNGDANEAIDFFRQMI-HIGLTPDSITYISLLCTCGSPVRLNQGRQIHSYIVKIGF 494
Query: 263 QSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG---------KMKEDGFEPNVYT 313
+ V +L+ MY + L A F +I NL+ + K++G
Sbjct: 495 DKEITVCNSLLTMYTKCSHLHDALNVFRDISRNANLVSWNAILSACLQKKQEG------- 547
Query: 314 WNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTAL 373
+L+ EM PD T+ +L C+ L ++ G QVH Y+I+ G DV + L
Sbjct: 548 -ETFRLYKEMHFSGNKPDSITITTLLGTCAELTSLGVGNQVHCYSIKSGLILDVSVCNGL 606
Query: 374 VDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDH 433
+DMYAKCGSLKHAR + D+VS ++++ YA G G E + FR + G +P+
Sbjct: 607 IDMYAKCGSLKHARDVFDSTQNLDIVSWSSLIVGYAQCGLGHEALNLFRIMTNLGVQPNE 666
Query: 434 ISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIK 492
+++L ALSAC H G ++ G + M + + P+ +H++C+VDLL+RAG L EA FI+
Sbjct: 667 VTYLGALSACSHIGLVEEGWRLYKSMETEHGIPPTREHFSCIVDLLARAGCLHEAETFIQ 726
Query: 493 KIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSD 552
K + D W LL C +H N++ + A +++L+P+N+ VML N+ A AG W +
Sbjct: 727 KSGLDADITAWKTLLAACKTHNNVDIAERGAGNILKLDPSNSAAMVMLCNIHASAGNWEE 786
Query: 553 LARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
+A+ R+ MK + K PG SWIE +D+ H F + D SH + IYT+++
Sbjct: 787 VAKLRKLMKQMGVQKVPGQSWIEVKDKFHIFFSEDSSHPQRNLIYTMLE 835
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 144/514 (28%), Positives = 238/514 (46%), Gaps = 81/514 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKCGS+ DA+KVF M + PN+V
Sbjct: 203 MYGKCGSMKDARKVFDTM------------------------------------QLPNVV 226
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+++I G++QNG +AI M +M G P+ T SV+ AC + LG++ H ++
Sbjct: 227 SWTSMISGYSQNGQANDAIIMYIQMTRSGQFPDQLTFGSVIKACYIAGDIDLGRQLHAHV 286
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
++ F + N L+ +Y G + A +F++ K+ +S T+I GY + G EA
Sbjct: 287 IKSWFGHHLTSQNALISMYTNFGQIEHASNVFTRIPTKDLISWGTMITGYIQLGYRVEA- 345
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LY +FRDLL + +P F FGSV A
Sbjct: 346 -----------------------------LY-----LFRDLLRQGTYQPNEFIFGSVFSA 371
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C+ + L GK++H + + GL+ + F G +L +MY ++ L +A+MAF +I+N + +
Sbjct: 372 CSSLLELEYGKQVHGMCVKFGLRRNVFAGCSLCDMYAKFGFLPSAKMAFCQIKNPDIVSW 431
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
F N A+ F +M+ + LTPD T +L C S + +G+Q+H+Y ++
Sbjct: 432 NAIIAAFADNGDANEAIDFFRQMIHIGLTPDSITYISLLCTCGSPVRLNQGRQIHSYIVK 491
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNAMLTAYAMHGHGKEGIA 419
G+D ++ + +L+ MY KC L A ++ IS +LVS NA+L+A E
Sbjct: 492 IGFDKEITVCNSLLTMYTKCSHLHDALNVFRDISRNANLVSWNAILSACLQKKQEGETFR 551
Query: 420 HFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPS--LKHYTC--MV 475
++ + SG +PD I+ + L C S+ G++ + Y +K L C ++
Sbjct: 552 LYKEMHFSGNKPDSITITTLLGTCAELTSLGVGNQ----VHCYSIKSGLILDVSVCNGLI 607
Query: 476 DLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
D+ ++ G L A + D V W +L+ G
Sbjct: 608 DMYAKCGSLKHARDVFDS-TQNLDIVSWSSLIVG 640
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 123/464 (26%), Positives = 207/464 (44%), Gaps = 40/464 (8%)
Query: 49 MSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQ 108
S+L E P + S +I Q+ Y E F ++ T +S++ ACA +
Sbjct: 117 FSNLSKELP---TNSYIIFLCKQHHYKEALEAFDFHLKNSNSHFEPSTYTSLVLACANFR 173
Query: 109 KLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIV 168
L K+ H ++ ++ + + + N ++++Y +CG M
Sbjct: 174 SLDYAKKIHDHVLKSNYQPSIILQNHMINMYGKCGSM----------------------- 210
Query: 169 GYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIE 228
+AR++FD M+ ++SW SMISGY N ++A M+ + R G
Sbjct: 211 --------KDARKVFDTMQ----LPNVVSWTSMISGYSQNGQANDAIIMYIQ-MTRSGQF 257
Query: 229 PTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMA 288
P TFGSV+ AC + G+++HA I AL+ MY + + A
Sbjct: 258 PDQLTFGSVIKACYIAGDIDLGRQLHAHVIKSWFGHHLTSQNALISMYTNFGQIEHASNV 317
Query: 289 FDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSL-DLTPDIYTVGIILSACSSLAT 347
F I + + G+ Y A+ LF ++L P+ + G + SACSSL
Sbjct: 318 FTRIPTKDLISWGTMITGYIQLGYRVEALYLFRDLLRQGTYQPNEFIFGSVFSACSSLLE 377
Query: 348 MERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTA 407
+E GKQVH ++ G +V G +L DMYAK G L A++A+ +I PD+VS NA++ A
Sbjct: 378 LEYGKQVHGMCVKFGLRRNVFAGCSLCDMYAKFGFLPSAKMAFCQIKNPDIVSWNAIIAA 437
Query: 408 YAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPS 467
+A +G E I FR+++ G PD I+++S L C + G + +
Sbjct: 438 FADNGDANEAIDFFRQMIHIGLTPDSITYISLLCTCGSPVRLNQGRQIHSYIVKIGFDKE 497
Query: 468 LKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCV 511
+ ++ + ++ L +A + I + V W A+L C+
Sbjct: 498 ITVCNSLLTMYTKCSHLHDALNVFRDISRNANLVSWNAILSACL 541
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 163/369 (44%), Gaps = 41/369 (11%)
Query: 199 NSMISGYVDNSLYDEAFSMFRDLLMRDG---IEPTSFTFGSVLIACADMNSLRKGKEIHA 255
NS I Y EA F D +++ EP+++T S+++ACA+ SL K+IH
Sbjct: 127 NSYIIFLCKQHHYKEALEAF-DFHLKNSNSHFEPSTYT--SLVLACANFRSLDYAKKIHD 183
Query: 256 LAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWN 315
+ Q + ++ MY + + A+ FD ++ + G+ N +
Sbjct: 184 HVLKSNYQPSIILQNHMINMYGKCGSMKDARKVFDTMQLPNVVSWTSMISGYSQNGQAND 243
Query: 316 AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVD 375
A+ ++ +M PD T G ++ AC ++ G+Q+HA+ I+ + + AL+
Sbjct: 244 AIIMYIQMTRSGQFPDQLTFGSVIKACYIAGDIDLGRQLHAHVIKSWFGHHLTSQNALIS 303
Query: 376 MYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASG-FRPDHI 434
MY G ++HA + RI T DL+S M+T Y G+ E + FR +L G ++P+
Sbjct: 304 MYTNFGQIEHASNVFTRIPTKDLISWGTMITGYIQLGYRVEALYLFRDLLRQGTYQPNEF 363
Query: 435 SFLSALSAC-----------VHAGSIK--------TGSEFFDLMAYYDVKPSLKHYTCMV 475
F S SAC VH +K G D+ A + PS K C +
Sbjct: 364 IFGSVFSACSSLLELEYGKQVHGMCVKFGLRRNVFAGCSLCDMYAKFGFLPSAKMAFCQI 423
Query: 476 ---DLLS---------RAGELGEAYEFIKK---IPMAPDSVMWGALLGGCVSHGNLEFGQ 520
D++S G+ EA +F ++ I + PDS+ + +LL C S L G+
Sbjct: 424 KNPDIVSWNAIIAAFADNGDANEAIDFFRQMIHIGLTPDSITYISLLCTCGSPVRLNQGR 483
Query: 521 IAADRLIEL 529
++++
Sbjct: 484 QIHSYIVKI 492
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 87/203 (42%), Gaps = 20/203 (9%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGSL A+ VF D VSW+S++ A GL EAL M++L + PN V
Sbjct: 609 MYAKCGSLKHARDVFDSTQNLDIVSWSSLIVGYAQCGLGHEALNLFRIMTNLGVQ-PNEV 667
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
++ + + G EE + M+ E G+ P S ++ AR L E +
Sbjct: 668 TYLGALSACSHIGLVEEGWRLYKSMETEHGIPPTREHFSCIVDLLARAGCL---HEAETF 724
Query: 120 ITRNGFMSNPFVVNGL---------VDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGY 170
I ++G ++ L VD+ R + LK+ S + CN +
Sbjct: 725 IQKSGLDADITAWKTLLAACKTHNNVDIAERGAG--NILKLDPSNSAAMVMLCNI----H 778
Query: 171 CENGNVAEARELFDQMEHLGVQR 193
GN E +L M+ +GVQ+
Sbjct: 779 ASAGNWEEVAKLRKLMKQMGVQK 801
>gi|297798028|ref|XP_002866898.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312734|gb|EFH43157.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 742
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 196/617 (31%), Positives = 294/617 (47%), Gaps = 98/617 (15%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y KCG L DA VF MPERD +V+
Sbjct: 176 YSKCGFLQDACLVFDEMPERD------------------------------------VVA 199
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLE---PNARTLSSVLPACARLQKLSLGKEFHG 118
W+A+I G QN E A+G L +M G + PN RTL AC+ L L G+ HG
Sbjct: 200 WTAIISGHVQNRESERALGYLCKMHTVGSDVDKPNPRTLECGFQACSNLGALKEGRCLHG 259
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
+ +NG S+ V + + +Y + G+ A F + ++ S +II +GNV E
Sbjct: 260 FAVKNGLASSNVVQSSIFSLYSKSGNPAEAYLSFRELGDQDMFSWTSIIASLVRSGNVEE 319
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
+ ++F +M++ G+Q I + +IS L E F ++R S S+L
Sbjct: 320 SFDMFWEMQNKGMQPDGIVISCLISELGKKMLVPEG-KAFHGFVIRHCFSLDSTVCNSLL 378
Query: 239 --------IACAD--------------MNSLRK-------GKEIHALAIALGLQSDTFVG 269
++ A+ N++ K GK +H + L V
Sbjct: 379 SMYCKFEFLSVAEKLFCKISEEGNTEAWNTMLKGYGAVLLGKSLHCYVVKTSLDLTISVV 438
Query: 270 GALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAM------------ 317
+L+++Y + DL A F E + N+ TWNAM
Sbjct: 439 NSLIDLYGKMGDLTVAWRMFCEADT---------------NIVTWNAMIASYVYCEQPDK 483
Query: 318 --QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVD 375
LF M+S + P T+ +L AC++ ++ERG+ +H Y I ++ ++ + TAL+D
Sbjct: 484 AIALFDRMVSENFKPSSITLVTLLMACANTGSLERGQMIHRYIIETEHEMNLSLSTALID 543
Query: 376 MYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHIS 435
MYAKCG L+ +R + S D V N M++ Y MHGH + IA F ++ S +P +
Sbjct: 544 MYAKCGHLEKSRELFDAASQKDAVCWNVMISGYGMHGHVESAIALFDQMEESDVKPTGPT 603
Query: 436 FLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIP 495
FL+ LSAC HAG ++ G F M YDVKP+LKHY+C+VDLLSR+G L EA + +P
Sbjct: 604 FLALLSACTHAGLVEHGKNLFLKMHQYDVKPNLKHYSCLVDLLSRSGNLQEAETTVMSMP 663
Query: 496 MAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLAR 555
+PD V+WG LL C++HG E G ADR + +P N G Y+MLAN+++ AG+W R
Sbjct: 664 FSPDGVIWGTLLSSCMTHGEFEMGIRMADRAVASDPQNDGYYIMLANMYSAAGKWEQAER 723
Query: 556 TRQKMKDRRMHKSPGCS 572
R+ M++ + K G S
Sbjct: 724 AREMMRESGVGKRAGHS 740
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 130/557 (23%), Positives = 222/557 (39%), Gaps = 109/557 (19%)
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W+++I NG ++G F M G P+ T V+ ACA L +G HG++
Sbjct: 98 WNSIIKAHFSNGDYARSLGFFFSMLLSGQSPDHFTAPMVVSACAELLWFDVGSFVHGFVL 157
Query: 122 RN-GFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
++ GF N V V Y +CG + A +F + ++ V+ II G+ +N A
Sbjct: 158 KHGGFERNTAVGASFVYFYSKCGFLQDACLVFDEMPERDVVAWTAIISGHVQNRESERAL 217
Query: 181 ELFDQMEHLG----------------------------------VQRGIISWN----SMI 202
+M +G V+ G+ S N S+
Sbjct: 218 GYLCKMHTVGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSNVVQSSIF 277
Query: 203 SGYVDNSLYDEAFSMFRDL--------------LMRDGIEPTSFTF-----------GSV 237
S Y + EA+ FR+L L+R G SF +
Sbjct: 278 SLYSKSGNPAEAYLSFRELGDQDMFSWTSIIASLVRSGNVEESFDMFWEMQNKGMQPDGI 337
Query: 238 LIACADMNSLRK-----GKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI 292
+I+C +K GK H I D+ V +L+ MYC+++ L A
Sbjct: 338 VISCLISELGKKMLVPEGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFEFLSVA------- 390
Query: 293 ENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGK 352
E L K+ E+G N WN M + G +L GK
Sbjct: 391 ---EKLFCKISEEG---NTEAWNTM--------------LKGYGAVL----------LGK 420
Query: 353 QVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHG 412
+H Y ++ D + + +L+D+Y K G L A + T ++V+ NAM+ +Y
Sbjct: 421 SLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEADT-NIVTWNAMIASYVYCE 479
Query: 413 HGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYT 472
+ IA F R+++ F+P I+ ++ L AC + GS++ G + + + +L T
Sbjct: 480 QPDKAIALFDRMVSENFKPSSITLVTLLMACANTGSLERGQMIHRYIIETEHEMNLSLST 539
Query: 473 CMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPN 532
++D+ ++ G L ++ E D+V W ++ G HG++E D++ E +
Sbjct: 540 ALIDMYAKCGHLEKSRELFDAASQ-KDAVCWNVMISGYGMHGHVESAIALFDQMEESDVK 598
Query: 533 NTG-NYVMLANLFAYAG 548
TG ++ L + +AG
Sbjct: 599 PTGPTFLALLSACTHAG 615
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/362 (22%), Positives = 153/362 (42%), Gaps = 21/362 (5%)
Query: 158 KNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSM 217
+N + +I Y G + +FD L +R + WNS+I + N Y +
Sbjct: 62 ENIFVASKLISSYASYGKPNLSSRVFD----LVTRRDVFLWNSIIKAHFSNGDYARSLGF 117
Query: 218 FRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIAL-GLQSDTFVGGALVEMY 276
F +L+ G P FT V+ ACA++ G +H + G + +T VG + V Y
Sbjct: 118 FFSMLL-SGQSPDHFTAPMVVSACAELLWFDVGSFVHGFVLKHGGFERNTAVGASFVYFY 176
Query: 277 CRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSL--DL-TPDIY 333
+ L A + FDE+ + + G N + A+ +M ++ D+ P+
Sbjct: 177 SKCGFLQDACLVFDEMPERDVVAWTAIISGHVQNRESERALGYLCKMHTVGSDVDKPNPR 236
Query: 334 TVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRI 393
T+ ACS+L ++ G+ +H +A++ G S + +++ +Y+K G+ A L+++ +
Sbjct: 237 TLECGFQACSNLGALKEGRCLHGFAVKNGLASSNVVQSSIFSLYSKSGNPAEAYLSFREL 296
Query: 394 STPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGS 453
D+ S +++ + G+ +E F + G +PD I +S + G
Sbjct: 297 GDQDMFSWTSIIASLVRSGNVEESFDMFWEMQNKGMQPDGIVISCLISELGKKMLVPEGK 356
Query: 454 EFFDLMAYY------DVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALL 507
F + + V SL C + LS A +L KI ++ W +L
Sbjct: 357 AFHGFVIRHCFSLDSTVCNSLLSMYCKFEFLSVAEKL------FCKISEEGNTEAWNTML 410
Query: 508 GG 509
G
Sbjct: 411 KG 412
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 123/284 (43%), Gaps = 5/284 (1%)
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
+I C SL ++ +AL I G + FV L+ Y Y + FD + +
Sbjct: 36 VILCDQSLSLESLRKHNALIITGGNSENIFVASKLISSYASYGKPNLSSRVFDLVTRRDV 95
Query: 298 LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAY 357
L N ++ F ML +PD +T +++SAC+ L + G VH +
Sbjct: 96 FLWNSIIKAHFSNGDYARSLGFFFSMLLSGQSPDHFTAPMVVSACAELLWFDVGSFVHGF 155
Query: 358 AIR-CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKE 416
++ G++ + +G + V Y+KCG L+ A L + + D+V+ A+++ + + +
Sbjct: 156 VLKHGGFERNTAVGASFVYFYSKCGFLQDACLVFDEMPERDVVAWTAIISGHVQNRESER 215
Query: 417 GIAHFRRILASGF---RPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTC 473
+ + ++ G +P+ + AC + G++K G + S +
Sbjct: 216 ALGYLCKMHTVGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSNVVQSS 275
Query: 474 MVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
+ L S++G EAY +++ D W +++ V GN+E
Sbjct: 276 IFSLYSKSGNPAEAYLSFRELG-DQDMFSWTSIIASLVRSGNVE 318
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 77/180 (42%), Gaps = 4/180 (2%)
Query: 335 VGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS 394
+ +IL C ++E ++ +A I G ++ + + L+ YA G + + ++
Sbjct: 34 ISVIL--CDQSLSLESLRKHNALIITGGNSENIFVASKLISSYASYGKPNLSSRVFDLVT 91
Query: 395 TPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSE 454
D+ N+++ A+ +G + F +L SG PDH + +SAC GS
Sbjct: 92 RRDVFLWNSIIKAHFSNGDYARSLGFFFSMLLSGQSPDHFTAPMVVSACAELLWFDVGSF 151
Query: 455 FFD-LMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSH 513
++ + + + V S+ G L +A ++P D V W A++ G V +
Sbjct: 152 VHGFVLKHGGFERNTAVGASFVYFYSKCGFLQDACLVFDEMP-ERDVVAWTAIISGHVQN 210
>gi|242084292|ref|XP_002442571.1| hypothetical protein SORBIDRAFT_08g022230 [Sorghum bicolor]
gi|241943264|gb|EES16409.1| hypothetical protein SORBIDRAFT_08g022230 [Sorghum bicolor]
Length = 698
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 184/606 (30%), Positives = 302/606 (49%), Gaps = 78/606 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KCG L DA++VF MP R N V
Sbjct: 139 VYAKCGRLSDARRVFDGMPVR------------------------------------NTV 162
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A+I G+ ++ +A+ + MQ L P+ T +++L SL ++ HG I
Sbjct: 163 SWNALIAGYAESRKPAQAMELFLEMQRVELVPDDATFAALLATVEGPSWYSLMQQLHGKI 222
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G SAL + V N I Y + G A++R
Sbjct: 223 AKYG----------------------SALGL---------VVLNAAITAYSQCGAFADSR 251
Query: 181 ELFDQMEHLGVQ-RGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
+FD G+Q R +ISWNSM+ Y + + DEA F ++ G++P ++F SV+
Sbjct: 252 RIFD-----GIQSRDLISWNSMLGAYAYHGMDDEAMRFFVRMMRESGVQPDMYSFTSVVS 306
Query: 240 ACADMN-SLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQD---LVAAQMAFDEIENI 295
C++ R+G+ IH+L + +GL+ T V A++ MY R+ + + A FD +
Sbjct: 307 VCSEHGCDDRQGRSIHSLVVKIGLEGVTHVCNAMIAMYTRFTENCMMEDAYKCFDSLVFK 366
Query: 296 ENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVH 355
+ + G+ + + +A++ F M + +++ D + + L +CS LA + G+QVH
Sbjct: 367 DAVSWNSMLTGYSHHGLSSDALRFFRFMRAENVSTDEFALSAALRSCSDLAVLRLGRQVH 426
Query: 356 AYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGK 415
+ I+ G+ S+ + ++L+ MY+KCG + AR +++ V N+M+ YA HG +
Sbjct: 427 SLVIQSGFSSNDFVSSSLIFMYSKCGMVGDARKSFEEADKGSSVPWNSMMFGYAQHGQAQ 486
Query: 416 EGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCM 474
F +L DH++F++ L+A H G + GSE + M Y + ++HY C
Sbjct: 487 TVTDLFSEMLDHKVPLDHVTFVALLTAYSHGGLVDEGSEILNSMETRYKIPLRMEHYACG 546
Query: 475 VDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNT 534
VDL RAG+L +A E I+ +P PD+++W LLG C HGN+E A L EP
Sbjct: 547 VDLYGRAGQLDKAKELIESMPFQPDAMVWMTLLGACRIHGNMELASDVASHLFVAEPRQH 606
Query: 535 GNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSE 594
YV+L+++++ G WSD A ++ MK+R + K PG SWIE ++E+H F A DRSH R +
Sbjct: 607 STYVLLSSMYSGRGMWSDRATVQKVMKNRGLSKVPGWSWIEVKNEVHSFNADDRSHPRMD 666
Query: 595 EIYTII 600
EI+ ++
Sbjct: 667 EIFDML 672
>gi|357118484|ref|XP_003560984.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
mitochondrial-like [Brachypodium distachyon]
Length = 678
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 184/576 (31%), Positives = 288/576 (50%), Gaps = 75/576 (13%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G L +A+KVF +P+R N+V
Sbjct: 171 MYAKGGDLKNARKVFDRIPDR------------------------------------NVV 194
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW++++ G QNG +E + + M+ E + P+ T++SVL AC L L G+ HG +
Sbjct: 195 SWTSMLSGCLQNGLAKEGLVLFNEMRQESILPSEYTMASVLMACTMLGSLHQGRLIHGSV 254
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
++G +SN F+ ++D+Y +CG+ +AR
Sbjct: 255 MKHGLVSNHFITAAMLDMYVKCGE-------------------------------AEDAR 283
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMF-RDLLMRDGIEPTSFTFGSVLI 239
++FD++ + ++ W +MI GY N +A +F D MR I P S T +VL
Sbjct: 284 QVFDELSFVD----LVLWTTMIVGYTQNGSPLDALLLFVDDKFMR--IVPNSVTIATVLS 337
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
A A + +L G+ IH +++ LG + V ALV+MY + + L A+ F + N + +
Sbjct: 338 ASAQLRNLSLGRSIHGISVKLGAVENDVVMNALVDMYAKCKALSDAKGIFGRVLNKDVVT 397
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
G+ N +A+ LFS M PD +V LSAC L + GK H YA+
Sbjct: 398 WNSLIAGYAENDMGSDALMLFSHMRVQGSLPDAISVVNALSACVCLGDLLIGKCFHTYAV 457
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
+ + S++++ TAL+++Y KC L A+ + ++ + V+ AM+ Y M G I
Sbjct: 458 KHAFMSNIYVNTALLNLYNKCADLPSAQRVFSEMNDRNTVTWGAMIGGYGMQGDSAGSID 517
Query: 420 HFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLL 478
F +L +P+ F S LS C H G + G + F+ MA Y+++ PS+KHY CMVD+L
Sbjct: 518 LFNEMLKDNIQPNEAVFTSILSTCSHTGMVTVGKKCFESMAHYFNITPSMKHYACMVDVL 577
Query: 479 SRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYV 538
+RAG L EA EFI+K+PM D+ +W A L GC H LEF + A +R++ L P+ V
Sbjct: 578 ARAGNLEEALEFIQKMPMQADTSIWQAFLHGCKLHSRLEFAEEAVNRMMVLHPDTPDFCV 637
Query: 539 MLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWI 574
M++NL+ GRW R+ MK+R + K PGCS +
Sbjct: 638 MMSNLYTSYGRWDKSLAIRKLMKERGLVKLPGCSSV 673
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 122/455 (26%), Positives = 220/455 (48%), Gaps = 40/455 (8%)
Query: 57 PNLVSWSAVIGGFTQNGYDEEAIGML--FRMQAEGLEPNARTLSSVLPACARLQKLSLGK 114
P+ ++ +G G EA+ + R + + + LS L A R G+
Sbjct: 89 PDAYTYKVALGWHAAAGRHAEAVAVHRDMRRRCPAEQEDVVVLSLALKAAVRSADFGYGR 148
Query: 115 EFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
H + + G + FV+N LVD+Y + GD+ KN
Sbjct: 149 RLHCDVVKAGG-GDLFVMNNLVDMYAKGGDL------------KN--------------- 180
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTF 234
AR++FD++ R ++SW SM+SG + N L E +F ++ ++ I P+ +T
Sbjct: 181 ----ARKVFDRIP----DRNVVSWTSMLSGCLQNGLAKEGLVLFNEM-RQESILPSEYTM 231
Query: 235 GSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIEN 294
SVL+AC + SL +G+ IH + GL S+ F+ A+++MY + + A+ FDE+
Sbjct: 232 ASVLMACTMLGSLHQGRLIHGSVMKHGLVSNHFITAAMLDMYVKCGEAEDARQVFDELSF 291
Query: 295 IENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV 354
++ +L G+ N +A+ LF + + + P+ T+ +LSA + L + G+ +
Sbjct: 292 VDLVLWTTMIVGYTQNGSPLDALLLFVDDKFMRIVPNSVTIATVLSASAQLRNLSLGRSI 351
Query: 355 HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHG 414
H +++ G + + ALVDMYAKC +L A+ + R+ D+V+ N+++ YA + G
Sbjct: 352 HGISVKLGAVENDVVMNALVDMYAKCKALSDAKGIFGRVLNKDVVTWNSLIAGYAENDMG 411
Query: 415 KEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCM 474
+ + F + G PD IS ++ALSACV G + G F + ++ T +
Sbjct: 412 SDALMLFSHMRVQGSLPDAISVVNALSACVCLGDLLIGKCFHTYAVKHAFMSNIYVNTAL 471
Query: 475 VDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
++L ++ +L A ++ ++V WGA++GG
Sbjct: 472 LNLYNKCADLPSAQRVFSEMN-DRNTVTWGAMIGG 505
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 143/339 (42%), Gaps = 41/339 (12%)
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
+L AC + SLR +HA +A GL L+ Y DL +A+ DE +
Sbjct: 34 LLPACTTLPSLRA---LHARLLAHGLLRGLRAHTKLLSCYAALGDLASARRVLDETPH-- 88
Query: 297 NLLGKMKEDGFEPNVYTWN-------AMQLFSEMLSL--DL-------TPDIYTVGIILS 340
P+ YT+ A +E +++ D+ D+ + + L
Sbjct: 89 ------------PDAYTYKVALGWHAAAGRHAEAVAVHRDMRRRCPAEQEDVVVLSLALK 136
Query: 341 ACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVS 400
A A G+++H ++ G D+ + LVDMYAK G LK+AR + RI ++VS
Sbjct: 137 AAVRSADFGYGRRLHCDVVKAG-GGDLFVMNNLVDMYAKGGDLKNARKVFDRIPDRNVVS 195
Query: 401 QNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA 460
+ML+ +G KEG+ F + P + S L AC GS+ G +
Sbjct: 196 WTSMLSGCLQNGLAKEGLVLFNEMRQESILPSEYTMASVLMACTMLGSLHQGRLIHGSVM 255
Query: 461 YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNL--EF 518
+ + + M+D+ + GE +A + ++ D V+W ++ G +G+
Sbjct: 256 KHGLVSNHFITAAMLDMYVKCGEAEDARQVFDELSFV-DLVLWTTMIVGYTQNGSPLDAL 314
Query: 519 GQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTR 557
D+ + + PN+ V +A + + + + +L+ R
Sbjct: 315 LLFVDDKFMRIVPNS----VTIATVLSASAQLRNLSLGR 349
>gi|255543413|ref|XP_002512769.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547780|gb|EEF49272.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 684
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 189/609 (31%), Positives = 318/609 (52%), Gaps = 79/609 (12%)
Query: 29 VVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAE 88
++ C +G + AL +++ P+L +W+ +I G TQ+G+ ++AI + + +
Sbjct: 17 LIKTCLNSGDLKRALYLFDKIPE-----PDLRTWTILISGHTQHGFPKKAIDIYSTLLSR 71
Query: 89 GLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSA 148
+ P+ L SV ACA L + K+ H + GF + + N L+D++ +C
Sbjct: 72 NVRPDKFVLLSVAKACAASGDLVVAKKIHDDAIQFGFNKDLVLGNALIDMFGKC------ 125
Query: 149 LKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDN 208
KF V AR +FD M V + ++SW SM YV+
Sbjct: 126 -----KF--------------------VNGARCVFDDM----VVKDVVSWTSMTYCYVNC 156
Query: 209 SLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFV 268
+ + +FR++ + +GI S T S+L ACAD ++ G+E+H + ++ + +V
Sbjct: 157 GMCRQGILLFREMGL-NGIRANSLTVSSILPACADY--IKLGREVHGFILRNEMEGNVYV 213
Query: 269 GGALVEMYCRYQDLVAAQMAFD---------------------EIENIENLLGKMKEDGF 307
ALV MY L A++ FD E E L +M+++G
Sbjct: 214 SSALVNMYASSLGLKQARLVFDSMYHRDIVSWNVMLTAYFLNKEYERGLGLFHQMRKEGI 273
Query: 308 EPNVYTWNA-----MQ---------LFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ 353
+ N +WNA MQ + +M + P+ T+ L C++L ++ GK+
Sbjct: 274 KLNQASWNAAISGCMQNGQHELALGILCKMQDSGIKPNRITIVSALPGCTNLESLRGGKE 333
Query: 354 VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGH 413
+H Y R + DV I TALV +YAKCG L+ +R + + D+V+ N M+ A +MHG
Sbjct: 334 IHGYVFRHWFIEDVTITTALVLLYAKCGDLELSRHVFNTMPRKDVVAWNTMIMANSMHGK 393
Query: 414 GKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYT 472
G E + F ++L SG P+ ++F+ LS C H+ G F+ M+ + + P HY+
Sbjct: 394 GGESLILFNKMLDSGVEPNSVTFIGVLSGCSHSQLADEGLLVFNSMSSEHSITPDADHYS 453
Query: 473 CMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPN 532
CMVD+LSRAG L EAY+FI+K+P+ P + WGALLG C + N+E G +AA +L E+EP+
Sbjct: 454 CMVDVLSRAGRLEEAYDFIRKMPIEPTAAAWGALLGACRVYKNVELGTLAASQLFEIEPD 513
Query: 533 NTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDR 592
N GNYV+L+N+ A +W + + R+ M+D+ + K+PG SW++ +++++ F D+S+++
Sbjct: 514 NAGNYVLLSNILVTAKKWVEASEIRKMMRDKGLAKTPGRSWVQVKNKVYSFVTGDKSNEQ 573
Query: 593 SEEIYTIID 601
+ IY +D
Sbjct: 574 KDMIYRFLD 582
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 119/229 (51%), Gaps = 1/229 (0%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY L A+ VF M RD VSWN ++TA N L +M + N
Sbjct: 220 MYASSLGLKQARLVFDSMYHRDIVSWNVMLTAYFLNKEYERGLGLFHQMRK-EGIKLNQA 278
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A I G QNG E A+G+L +MQ G++PN T+ S LP C L+ L GKE HGY+
Sbjct: 279 SWNAAISGCMQNGQHELALGILCKMQDSGIKPNRITIVSALPGCTNLESLRGGKEIHGYV 338
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R+ F+ + + LV +Y +CGD+ + +F+ K+ V+ NT+I+ +G E+
Sbjct: 339 FRHWFIEDVTITTALVLLYAKCGDLELSRHVFNTMPRKDVVAWNTMIMANSMHGKGGESL 398
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEP 229
LF++M GV+ +++ ++SG + L DE +F + I P
Sbjct: 399 ILFNKMLDSGVEPNSVTFIGVLSGCSHSQLADEGLLVFNSMSSEHSITP 447
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 113/403 (28%), Positives = 172/403 (42%), Gaps = 72/403 (17%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
M+GKC ++ A+ VF M +D VSW S +T C N C
Sbjct: 121 MFGKCKFVNGARCVFDDMVVKDVVSWTS-MTYCYVN--------C--------------- 156
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFR-MQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
G + G +LFR M G+ N+ T+SS+LPACA + LG+E HG+
Sbjct: 157 -------GMCRQGI------LLFREMGLNGIRANSLTVSSILPACA--DYIKLGREVHGF 201
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
I RN N +V + LV++Y + A +F ++ VS N ++ Y N
Sbjct: 202 ILRNEMEGNVYVSSALVNMYASSLGLKQARLVFDSMYHRDIVSWNVMLTAYFLNKEYERG 261
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRD-GIEPTSFTFGSVL 238
LF QM G++ SWN+ ISG + N ++ A + M+D GI+P T S L
Sbjct: 262 LGLFHQMRKEGIKLNQASWNAAISGCMQNGQHELALGIL--CKMQDSGIKPNRITIVSAL 319
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
C ++ SLR GKEIH D + ALV +Y + DL ++ F+ +
Sbjct: 320 PGCTNLESLRGGKEIHGYVFRHWFIEDVTITTALVLLYAKCGDLELSRHVFNTMP----- 374
Query: 299 LGKMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSS 344
+V WN M LF++ML + P+ T +LS CS
Sbjct: 375 ---------RKDVVAWNTMIMANSMHGKGGESLILFNKMLDSGVEPNSVTFIGVLSGCSH 425
Query: 345 LATMERGKQV-HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHA 386
+ G V ++ + D + +VD+ ++ G L+ A
Sbjct: 426 SQLADEGLLVFNSMSSEHSITPDADHYSCMVDVLSRAGRLEEA 468
>gi|356542389|ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Glycine max]
Length = 676
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 174/543 (32%), Positives = 279/543 (51%), Gaps = 38/543 (6%)
Query: 57 PNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARL-QKLSLGKE 115
PN+ ++ +I G N +A+ + M+ G P+ T VL AC RL +G
Sbjct: 64 PNIFLYNTLIRGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLS 123
Query: 116 FHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGN 175
H + + GF + FV GLV +Y + NG
Sbjct: 124 LHSLVIKTGFDWDVFVKTGLVCLYSK-------------------------------NGF 152
Query: 176 VAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFG 235
+ +AR++FD++ ++ ++SW ++I GY+++ + EA +FR LL G+ P SFT
Sbjct: 153 LTDARKVFDEIP----EKNVVSWTAIICGYIESGCFGEALGLFRGLL-EMGLRPDSFTLV 207
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
+L AC+ + L G+ I G + FV +LV+MY + + A+ FD +
Sbjct: 208 RILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKCGSMEEARRVFDGMVEK 267
Query: 296 ENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVH 355
+ + G+ N A+ +F EM ++ PD Y + + SACS L +E G
Sbjct: 268 DVVCWSALIQGYASNGMPKEALDVFFEMQRENVRPDCYAMVGVFSACSRLGALELGNWAR 327
Query: 356 AYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGK 415
+ S+ +GTAL+D YAKCGS+ A+ +K + D V NA+++ AM GH
Sbjct: 328 GLMDGDEFLSNPVLGTALIDFYAKCGSVAQAKEVFKGMRRKDCVVFNAVISGLAMCGHVG 387
Query: 416 EGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCM 474
F +++ G +PD +F+ L C HAG + G +F M+ + V P+++HY CM
Sbjct: 388 AAFGVFGQMVKVGMQPDGNTFVGLLCGCTHAGLVDDGHRYFSGMSSVFSVTPTIEHYGCM 447
Query: 475 VDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNT 534
VDL +RAG L EA + I+ +PM +S++WGALLGGC H + + + +LIELEP N+
Sbjct: 448 VDLQARAGLLVEAQDLIRSMPMEANSIVWGALLGGCRLHKDTQLAEHVLKQLIELEPWNS 507
Query: 535 GNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSE 594
G+YV+L+N+++ + RW + + R + + M K PGCSW+E +H+F D SH S
Sbjct: 508 GHYVLLSNIYSASHRWDEAEKIRSSLNQKGMQKLPGCSWVEVDGVVHEFLVGDTSHPLSH 567
Query: 595 EIY 597
+IY
Sbjct: 568 KIY 570
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 92/389 (23%), Positives = 162/389 (41%), Gaps = 75/389 (19%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y K G L DA+KVF +PE+ N+V
Sbjct: 146 LYSKNGFLTDARKVFDEIPEK------------------------------------NVV 169
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A+I G+ ++G EA+G+ + GL P++ TL +L AC+R+ L+ G+ GY+
Sbjct: 170 SWTAIICGYIESGCFGEALGLFRGLLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYM 229
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+G + N FV LVD+Y +CG M A ++F K+ V + +I GY NG EA
Sbjct: 230 RESGSVGNVFVATSLVDMYAKCGSMEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEAL 289
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
++F +M+ R+ + P + V A
Sbjct: 290 DVFFEMQ------------------------------------RENVRPDCYAMVGVFSA 313
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C+ + +L G L S+ +G AL++ Y + + A+ F + + ++
Sbjct: 314 CSRLGALELGNWARGLMDGDEFLSNPVLGTALIDFYAKCGSVAQAKEVFKGMRRKDCVVF 373
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHA--YA 358
G + A +F +M+ + + PD T +L C+ ++ G + + +
Sbjct: 374 NAVISGLAMCGHVGAAFGVFGQMVKVGMQPDGNTFVGLLCGCTHAGLVDDGHRYFSGMSS 433
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHAR 387
+ + H G +VD+ A+ G L A+
Sbjct: 434 VFSVTPTIEHYG-CMVDLQARAGLLVEAQ 461
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 135/296 (45%), Gaps = 39/296 (13%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGS+++A++VF M E+D +V
Sbjct: 247 MYAKCGSMEEARRVFDGMVEKD------------------------------------VV 270
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
WSA+I G+ NG +EA+ + F MQ E + P+ + V AC+RL L LG G +
Sbjct: 271 CWSALIQGYASNGMPKEALDVFFEMQRENVRPDCYAMVGVFSACSRLGALELGNWARGLM 330
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ F+SNP + L+D Y +CG + A ++F K+ V N +I G G+V A
Sbjct: 331 DGDEFLSNPVLGTALIDFYAKCGSVAQAKEVFKGMRRKDCVVFNAVISGLAMCGHVGAAF 390
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+F QM +G+Q ++ ++ G L D+ F + + PT +G ++
Sbjct: 391 GVFGQMVKVGMQPDGNTFVGLLCGCTHAGLVDDGHRYFSGMSSVFSVTPTIEHYGCMVDL 450
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
A L + ++ L ++ +++++ V GAL+ ++D A+ ++ +E
Sbjct: 451 QARAGLLVEAQD---LIRSMPMEANSIVWGALLGGCRLHKDTQLAEHVLKQLIELE 503
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 130/292 (44%), Gaps = 5/292 (1%)
Query: 244 MNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMK 303
+ SL + K+ H L + LGL DT++ L+ + A + F + + L
Sbjct: 13 LKSLHQAKQCHCLLLRLGLHQDTYLINLLLRSSLHFAATQYATVVFAQTPHPNIFLYNTL 72
Query: 304 EDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLA-TMERGKQVHAYAIRCG 362
G N +A+ +++ M PD +T +L AC+ L G +H+ I+ G
Sbjct: 73 IRGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKTG 132
Query: 363 YDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFR 422
+D DV + T LV +Y+K G L AR + I ++VS A++ Y G E + FR
Sbjct: 133 FDWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGLFR 192
Query: 423 RILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAG 482
+L G RPD + + L AC G + +G M ++ T +VD+ ++ G
Sbjct: 193 GLLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKCG 252
Query: 483 ELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNT 534
+ EA + + D V W AL+ G S+G + A D E++ N
Sbjct: 253 SMEEARRVFDGM-VEKDVVCWSALIQGYASNG---MPKEALDVFFEMQRENV 300
>gi|242037437|ref|XP_002466113.1| hypothetical protein SORBIDRAFT_01g001570 [Sorghum bicolor]
gi|241919967|gb|EER93111.1| hypothetical protein SORBIDRAFT_01g001570 [Sorghum bicolor]
Length = 693
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 199/646 (30%), Positives = 315/646 (48%), Gaps = 72/646 (11%)
Query: 19 PERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEA 78
P D V + A +G + +AL+ +RM N+V+W+ I G T+NG E A
Sbjct: 38 PPPDVVLDCKRLDALMKSGRLSDALDLFDRMPR-----KNVVAWTTAISGCTRNGQPEAA 92
Query: 79 IGMLFRMQAEGLEPN--ARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLV 136
M M G+ N A + A A LSLG++ H R GF ++ ++ + L+
Sbjct: 93 AAMFADMLESGVAANDFACNAALAACAAAGAGALSLGEQVHSLAVRAGFAADAWIGSCLI 152
Query: 137 DVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGII 196
++Y RCG M +A ++F + + V +++ C NG++A A E+ QM G+Q
Sbjct: 153 ELYSRCGSMWAAEEVFRRMEAPDVVGYTSLVSALCRNGDLARAVEVLCQMMRQGLQPNEH 212
Query: 197 SWNSMI----------------------SGYVDNSL---------YDEAFSMFRD----- 220
+ SM+ S Y +L +D A ++F +
Sbjct: 213 TMTSMLAECPRMIGEQIHGYMLKVMGSQSVYASTALIDFYSRYGDFDMAETVFENLDSKN 272
Query: 221 ---------LLMRDG----------------IEPTSFTFGSVLIACADMNSLRKGKEIHA 255
L +RDG +EP F F L AC S+ G++IH
Sbjct: 273 VVSWCSMMQLCIRDGRLEDALRVFSEMISEAVEPNEFAFSIALGACG---SVCLGRQIHC 329
Query: 256 LAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWN 315
AI L +D V AL+ MY R + + +IEN + + N ++
Sbjct: 330 SAIKCNLMTDIRVSNALLSMYGRSGFVSEVEAVLGKIENPDLVSWTAAISANFQNGFSEK 389
Query: 316 AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVD 375
A+ L +M S TP+ Y LS+C+ LA +++G+Q+H A++ G D V G AL++
Sbjct: 390 AVALLLQMHSEGFTPNDYAFSSGLSSCADLALLDQGRQLHCLALKLGCDFKVCTGNALIN 449
Query: 376 MYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHIS 435
MY+KCG + ARLA+ ++ D++S N+++ A HG + F + +SG++PD +
Sbjct: 450 MYSKCGQIGSARLAFDVMNLHDVMSWNSLIHGLAQHGAANLVLEAFSEMCSSGWQPDDST 509
Query: 436 FLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKI 494
F++ L C HAG +K G FF LM Y + P+ HY CM+D+L R G EA IK +
Sbjct: 510 FIAVLVGCNHAGLVKEGETFFRLMTDRYGLTPTPSHYACMIDMLGRNGRFDEALHMIKNM 569
Query: 495 PMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLA 554
P PD ++W LL C H NL+ G++A D+L+EL ++ +YV+++NL+A W D
Sbjct: 570 PFEPDVLIWKTLLASCKLHKNLDIGKLATDKLMELSERDSASYVLMSNLYAMHEEWQDAE 629
Query: 555 RTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTII 600
R R++M + + K G SWIE ++E+ F A D SH S IY ++
Sbjct: 630 RVRRRMDEIGVKKDAGWSWIEVKNEVSTFVARDTSHSDSASIYQML 675
Score = 42.7 bits (99), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG + A+ F +M D +SWNS++ A +G LE M S P+
Sbjct: 450 MYSKCGQIGSARLAFDVMNLHDVMSWNSLIHGLAQHGAANLVLEAFSEMCS-SGWQPDDS 508
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE--GLEPN 93
++ AV+ G G +E FR+ + GL P
Sbjct: 509 TFIAVLVGCNHAGLVKEG-ETFFRLMTDRYGLTPT 542
>gi|357440905|ref|XP_003590730.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479778|gb|AES60981.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 627
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 186/588 (31%), Positives = 308/588 (52%), Gaps = 40/588 (6%)
Query: 22 DCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGM 81
+C S N+ +T + + ++ T N+ W+++I G+ +N + AI +
Sbjct: 55 NCFSQNAFLTTRLISAYATFGDSIMSKLVFDSVHTKNVYLWNSLINGYVKNHQFDNAI-V 113
Query: 82 LFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRR 141
LFR L P+ TL+++ +Q L LGK HG R GF+S+ V N ++ +Y R
Sbjct: 114 LFRQMGRCLLPDDYTLATISKVSGEIQDLVLGKLIHGKSLRIGFVSDIVVGNSVMSMYIR 173
Query: 142 CGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSM 201
C + A+K+F + +N S N II G GN
Sbjct: 174 CREFGDAMKVFDEMPQRNVGSFNVIISGCAALGN-------------------------- 207
Query: 202 ISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMN-SLRKGKEIHALAIAL 260
+D SLY + ++ FR + + G +FT S+L C D + G+E+H +
Sbjct: 208 ----LDYSLYADLWNFFRRMQCQ-GYNADAFTVASLLPMCCDSDGKFDHGRELHCYLVKN 262
Query: 261 GLQ----SDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNA 316
GL SD +G +L++MY R LV ++ FD++++ + +G+ N A
Sbjct: 263 GLDLKMCSDVHMGSSLIDMYSRSNKLVLSRRVFDQMKSRNIYVWTAMINGYVQNGAPEGA 322
Query: 317 MQLFSEMLSLD-LTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVD 375
+ LF EM D + P+ ++ +L AC L + GKQVHA++I+ ++ + + AL+D
Sbjct: 323 LILFREMQRKDRIRPNRVSLVSVLPACGLLVGLMGGKQVHAFSIKMEFNDYISLRNALID 382
Query: 376 MYAKCGSLKHARLAYKRIS-TPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHI 434
MYAKCGSL +AR + S + D ++ +++++AY +HG G+E + + +L G +PD I
Sbjct: 383 MYAKCGSLDYARRVFDNGSYSKDAITWSSIISAYGLHGKGQEALTTYYEMLQQGIKPDMI 442
Query: 435 SFLSALSACVHAGSIKTGSEFFD-LMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKK 493
+ + LSAC +G + G ++ L Y++KPS++ C+VDLL R+G+L +A +FI++
Sbjct: 443 TVVGVLSACCRSGLVDEGISIYNSLTTEYEMKPSVEICGCVVDLLGRSGQLDQALDFIRE 502
Query: 494 IPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDL 553
+P+ P +WG+LL V HGN +A L+ELEP N NY+ L+N +A + RW ++
Sbjct: 503 MPIIPGPSVWGSLLTASVIHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASSRRWDEI 562
Query: 554 ARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
R MK+R + K PG SWI D+ H F +D+ H S IY ++D
Sbjct: 563 TEVRSMMKERGLRKVPGISWITISDKNHFFTVADKVHPSSSSIYEMLD 610
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 113/463 (24%), Positives = 189/463 (40%), Gaps = 104/463 (22%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +C DA KVF MP+R+ S+N +++ CAA G +LD
Sbjct: 170 MYIRCREFGDAMKVFDEMPQRNVGSFNVIISGCAALG-------------NLD------Y 210
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQ-KLSLGKEFHGY 119
S A + F + RMQ +G +A T++S+LP C K G+E H Y
Sbjct: 211 SLYADLWNFFR------------RMQCQGYNADAFTVASLLPMCCDSDGKFDHGRELHCY 258
Query: 120 ITRNGF----MSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGN 175
+ +NG S+ + + L+D+Y R ++ + ++F + +N +I GY +NG
Sbjct: 259 LVKNGLDLKMCSDVHMGSSLIDMYSRSNKLVLSRRVFDQMKSRNIYVWTAMINGYVQNGA 318
Query: 176 VAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFG 235
+ A +FR++ +D I P +
Sbjct: 319 P-----------------------------------EGALILFREMQRKDRIRPNRVSLV 343
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
SVL AC + L GK++HA +I + + AL++MY + L A+ FD
Sbjct: 344 SVLPACGLLVGLMGGKQVHAFSIKMEFNDYISLRNALIDMYAKCGSLDYARRVFDN---- 399
Query: 296 ENLLGKMKEDGFEPNVYTWN--------------AMQLFSEMLSLDLTPDIYTVGIILSA 341
G +D TW+ A+ + EML + PD+ TV +LSA
Sbjct: 400 ----GSYSKDAI-----TWSSIISAYGLHGKGQEALTTYYEMLQQGIKPDMITVVGVLSA 450
Query: 342 CSSLATMERGKQVHAYAIRCGYD--SDVHIGTALVDMYAKCGSLKHARLAYKRIS-TPDL 398
C ++ G ++ ++ Y+ V I +VD+ + G L A + + P
Sbjct: 451 CCRSGLVDEGISIYN-SLTTEYEMKPSVEICGCVVDLLGRSGQLDQALDFIREMPIIPGP 509
Query: 399 VSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALS 441
++LTA +HG+ +R +L P++ S +LS
Sbjct: 510 SVWGSLLTASVIHGNSMTRDLAYRCLLE--LEPENPSNYISLS 550
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 139/320 (43%), Gaps = 21/320 (6%)
Query: 243 DMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKM 302
D++SL+ ++ H+ + + F+ L+ Y + D + +++ FD + L
Sbjct: 38 DLHSLKLTQQCHSQILTNCFSQNAFLTTRLISAYATFGDSIMSKLVFDSVHTKNVYLWNS 97
Query: 303 KEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCG 362
+G+ N NA+ LF +M L PD YT+ I + + GK +H ++R G
Sbjct: 98 LINGYVKNHQFDNAIVLFRQMGRC-LLPDDYTLATISKVSGEIQDLVLGKLIHGKSLRIG 156
Query: 363 YDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGI---- 418
+ SD+ +G +++ MY +C A + + ++ S N +++ A G+ +
Sbjct: 157 FVSDIVVGNSVMSMYIRCREFGDAMKVFDEMPQRNVGSFNVIISGCAALGNLDYSLYADL 216
Query: 419 -AHFRRILASGFRPDHISFLSALSACVHA-GSIKTGSEFFDLMAYYDVKPSLKHYTC--- 473
FRR+ G+ D + S L C + G G E + Y VK L C
Sbjct: 217 WNFFRRMQCQGYNADAFTVASLLPMCCDSDGKFDHGRE----LHCYLVKNGLDLKMCSDV 272
Query: 474 -----MVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIE 528
++D+ SR+ +L + ++ + + +W A++ G V +G E G + R ++
Sbjct: 273 HMGSSLIDMYSRSNKLVLSRRVFDQMK-SRNIYVWTAMINGYVQNGAPE-GALILFREMQ 330
Query: 529 LEPNNTGNYVMLANLFAYAG 548
+ N V L ++ G
Sbjct: 331 RKDRIRPNRVSLVSVLPACG 350
>gi|356553444|ref|XP_003545066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Glycine max]
Length = 1033
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 188/602 (31%), Positives = 306/602 (50%), Gaps = 77/602 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KC ++D+A+ +F++MP +D VS
Sbjct: 399 LYAKCNAIDNARSIFQLMPSKDTVS----------------------------------- 423
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
W+++I G N EEA+ M+ G+ P+ ++ S L +CA L + LG++ HG
Sbjct: 424 -WNSIISGLDHNERFEEAVACFHTMRRNGMVPSKFSVISTLSSCASLGWIMLGQQIHGEG 482
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G + V N L+ +Y M K+F F +
Sbjct: 483 IKCGLDLDVSVSNALLTLYAETDCMEEYQKVF--FLMPE--------------------- 519
Query: 181 ELFDQMEHLGVQRGIISWNSMISGY-VDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
+DQ +SWNS I + +A F ++ M+ G +P TF ++L
Sbjct: 520 --YDQ----------VSWNSFIGALATSEASVLQAIKYFLEM-MQAGWKPNRVTFINILS 566
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI-ENIENL 298
A + ++ L G++IHAL + + D + L+ Y + + + ++ F + E + +
Sbjct: 567 AVSSLSLLELGRQIHALILKHSVADDNAIENTLLAFYGKCEQMEDCEIIFSRMSERRDEV 626
Query: 299 LGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYA 358
G+ N AM L M+ D +T+ +LSAC+S+AT+ERG +VHA A
Sbjct: 627 SWNAMISGYIHNGILHKAMGLVWLMMQKGQRLDDFTLATVLSACASVATLERGMEVHACA 686
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGI 418
IR +++V +G+ALVDMYAKCG + +A ++ + ++ S N+M++ YA HGHG + +
Sbjct: 687 IRACLEAEVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGGKAL 746
Query: 419 AHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDL 477
F ++ G PDH++F+ LSAC H G + G E F M Y++ P ++H++CMVDL
Sbjct: 747 KLFTQMKQHGQLPDHVTFVGVLSACSHVGLVDEGFEHFKSMGEVYELAPRIEHFSCMVDL 806
Query: 478 LSRAGELGEAYEFIKKIPMAPDSVMWGALLGGC--VSHGNLEFGQIAADRLIELEPNNTG 535
L RAG++ + EFIK +PM P++++W +LG C + N E G+ AA LIELEP N
Sbjct: 807 LGRAGDVKKLEEFIKTMPMNPNALIWRTILGACCRANSRNTELGRRAAKMLIELEPLNAV 866
Query: 536 NYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEE 595
NYV+L+N+ A G+W D+ R M++ + K GCSW+ +D +H F A D++H E+
Sbjct: 867 NYVLLSNMHAAGGKWEDVEEARLAMRNAEVKKEAGCSWVTMKDGVHVFVAGDQTHPEKEK 926
Query: 596 IY 597
IY
Sbjct: 927 IY 928
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 135/590 (22%), Positives = 252/590 (42%), Gaps = 98/590 (16%)
Query: 13 KVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQN 72
+++K D N++V G ++ A + + M NLVSWS ++ G+ QN
Sbjct: 64 QIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQ-----KNLVSWSCLVSGYAQN 118
Query: 73 GYDEEAIGMLFR-MQAEGLEPNARTLSSVLPACARL--QKLSLGKEFHGYITRNGFMSNP 129
G +EA MLFR + + GL PN + S L AC L L LG E HG I+++ + S+
Sbjct: 119 GMPDEAC-MLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISKSPYASDM 177
Query: 130 FVVNGLVDVYRRC--------------------------------GDMLSALKIFSKFSI 157
+ N L+ +Y C GD +SA K+FS
Sbjct: 178 VLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAFKLFSSMQR 237
Query: 158 K-NEVSC--------------------------------------------NTIIVGYCE 172
+ E++C + ++ G+
Sbjct: 238 EATELNCRPNEYTFCSLVTVACSLVDCGLTLLEQMLARIEKSSFVKDLYVGSALVSGFAR 297
Query: 173 NGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSF 232
G + A+ +F+QM+ R ++ N ++ G +EA +F++ M+D +E +
Sbjct: 298 YGLIDSAKMIFEQMD----DRNAVTMNGLMVGLARQHQGEEAAKIFKE--MKDLVEINAS 351
Query: 233 TFGSVLIACADMNSL----RKGKEIHALAIALGLQSD-TFVGGALVEMYCRYQDLVAAQM 287
++ +L A + ++L RKG+E+HA I L +G ALV +Y + + A+
Sbjct: 352 SYAVLLSAFTEFSNLKEGKRKGQEVHAYLIRNALVDVWILIGNALVNLYAKCNAIDNARS 411
Query: 288 AFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLAT 347
F + + + + G + N A+ F M + P ++V LS+C+SL
Sbjct: 412 IFQLMPSKDTVSWNSIISGLDHNERFEEAVACFHTMRRNGMVPSKFSVISTLSSCASLGW 471
Query: 348 MERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTA 407
+ G+Q+H I+CG D DV + AL+ +YA+ ++ + + + D VS N+ + A
Sbjct: 472 IMLGQQIHGEGIKCGLDLDVSVSNALLTLYAETDCMEEYQKVFFLMPEYDQVSWNSFIGA 531
Query: 408 YAM-HGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKP 466
A + I +F ++ +G++P+ ++F++ LSA ++ G + L+ + V
Sbjct: 532 LATSEASVLQAIKYFLEMMQAGWKPNRVTFINILSAVSSLSLLELGRQIHALILKHSVAD 591
Query: 467 SLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNL 516
++ + ++ + ++ D V W A++ G + +G L
Sbjct: 592 DNAIENTLLAFYGKCEQMEDCEIIFSRMSERRDEVSWNAMISGYIHNGIL 641
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 102/423 (24%), Positives = 179/423 (42%), Gaps = 80/423 (18%)
Query: 115 EFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
+ H I + G S+ F N LV+++ R G+++SA K+F + KN VS + ++ GY +NG
Sbjct: 60 QLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCLVSGYAQNG 119
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTF 234
EA LF RGIIS G+ P +
Sbjct: 120 MPDEACMLF---------RGIIS---------------------------AGLLPNHYAI 143
Query: 235 GSVLIACADM--NSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLV-AAQMAFDE 291
GS L AC ++ N L+ G EIH L SD + L+ MY + A+ F+E
Sbjct: 144 GSALRACQELGPNMLKLGMEIHGLISKSPYASDMVLSNVLMSMYSHCSASIDDARRVFEE 203
Query: 292 IENIENLLGKMKEDGFEPNVYTWN--------------AMQLFSEM----LSLDLTPDIY 333
I KMK +WN A +LFS M L+ P+ Y
Sbjct: 204 I--------KMKTSA------SWNSIISVYCRRGDAISAFKLFSSMQREATELNCRPNEY 249
Query: 334 TVGIILSACSSLAT--MERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYK 391
T +++ SL + +Q+ A + + D+++G+ALV +A+ G + A++ ++
Sbjct: 250 TFCSLVTVACSLVDCGLTLLEQMLARIEKSSFVKDLYVGSALVSGFARYGLIDSAKMIFE 309
Query: 392 RISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKT 451
++ + V+ N ++ A G+E F+ + + S+ LSA ++K
Sbjct: 310 QMDDRNAVTMNGLMVGLARQHQGEEAAKIFKE-MKDLVEINASSYAVLLSAFTEFSNLKE 368
Query: 452 GSEFFDLMAYYDVKPSLKHY-----TCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGAL 506
G + Y ++ +L +V+L ++ + A + +P + D+V W ++
Sbjct: 369 GKRKGQEVHAYLIRNALVDVWILIGNALVNLYAKCNAIDNARSIFQLMP-SKDTVSWNSI 427
Query: 507 LGG 509
+ G
Sbjct: 428 ISG 430
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 82/369 (22%), Positives = 147/369 (39%), Gaps = 14/369 (3%)
Query: 243 DMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKM 302
D ++ ++H GL SD F LV ++ R +LV+AQ FDE+ +
Sbjct: 51 DSCTVEDAHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSC 110
Query: 303 KEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLAT--MERGKQVHAYAIR 360
G+ N A LF ++S L P+ Y +G L AC L ++ G ++H +
Sbjct: 111 LVSGYAQNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISK 170
Query: 361 CGYDSDVHIGTALVDMYAKC-GSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
Y SD+ + L+ MY+ C S+ AR ++ I S N++++ Y G
Sbjct: 171 SPYASDMVLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAFK 230
Query: 420 HF----RRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPS----LKHY 471
F R RP+ +F S ++ V + G + M K S L
Sbjct: 231 LFSSMQREATELNCRPNEYTFCSLVT--VACSLVDCGLTLLEQMLARIEKSSFVKDLYVG 288
Query: 472 TCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEP 531
+ +V +R G + A +++ M G ++G H E +I + + +L
Sbjct: 289 SALVSGFARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKE-MKDLVE 347
Query: 532 NNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHD 591
N +Y +L + F + R Q++ + + WI + + A + D
Sbjct: 348 INASSYAVLLSAFTEFSNLKEGKRKGQEVHAYLIRNALVDVWILIGNALVNLYAKCNAID 407
Query: 592 RSEEIYTII 600
+ I+ ++
Sbjct: 408 NARSIFQLM 416
>gi|356567494|ref|XP_003551954.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 188/602 (31%), Positives = 308/602 (51%), Gaps = 44/602 (7%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KCGSL +A+ F + + S+N+++ A A + L+ A + + + P++V
Sbjct: 53 LYSKCGSLHNAQTSFDLTQYPNVFSYNTLINAYAKHSLIHLARQVFDEIPQ-----PDIV 107
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
S++ +I + G A+ + ++ + TLS V+ AC + L ++ H ++
Sbjct: 108 SYNTLIAAYADRGECRPALRLFAEVRELRFGLDGFTLSGVIIACG--DDVGLVRQLHCFV 165
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
G+ D Y N ++ Y G + EAR
Sbjct: 166 VVCGY-----------DCYASVN--------------------NAVLACYSRKGFLNEAR 194
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+F +M G R +SWN+MI + EA +FR+++ R G++ FT SVL A
Sbjct: 195 RVFREMGE-GGGRDEVSWNAMIVACGQHREGLEAVELFREMV-RRGLKVDMFTMASVLTA 252
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQD-LVAAQMAFDEIENIENLL 299
+ L G + H + I G ++ VG L+++Y + +V + F+EI + +L
Sbjct: 253 FTCVKDLVGGMQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVECRKVFEEIAAPDLVL 312
Query: 300 GKMKEDGF-EPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYA 358
GF + + + + F EM PD + + SACS+L++ GKQVHA A
Sbjct: 313 WNTMISGFSQYEDLSEDGIWCFREMQHNGFHPDDCSFVCVTSACSNLSSPSVGKQVHALA 372
Query: 359 IRCGYDSD-VHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEG 417
I+ + V + ALV MY+KCG++ AR + + ++VS N+M+ YA HG E
Sbjct: 373 IKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNMVSLNSMIAGYAQHGVEVES 432
Query: 418 IAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVD 476
+ F +L P+ I+F++ LSACVH G ++ G ++F++M + ++P +HY+CM+D
Sbjct: 433 LRLFELMLQKDIAPNTITFIAVLSACVHTGKVEEGQKYFNMMKERFRIEPEAEHYSCMID 492
Query: 477 LLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGN 536
LL RAG+L EA I+ +P P S+ W LLG C HGN+E AA+ ++LEP N
Sbjct: 493 LLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLQLEPYNAAP 552
Query: 537 YVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEI 596
YVML+N++A A RW + A ++ M++R + K PGCSWIE ++H F A D SH +EI
Sbjct: 553 YVMLSNMYASAARWEEAATVKRLMRERGVKKKPGCSWIEIDKKVHVFVAEDTSHPMIKEI 612
Query: 597 YT 598
+
Sbjct: 613 HV 614
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 78/209 (37%), Gaps = 35/209 (16%)
Query: 338 ILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSL-------------- 383
+L AC + + GK +HA + ++ +Y+KCGSL
Sbjct: 15 LLKACIAQRDLITGKTLHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFDLTQYPN 74
Query: 384 ------------KH-----ARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILA 426
KH AR + I PD+VS N ++ AYA G + + F +
Sbjct: 75 VFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLFAEVRE 134
Query: 427 SGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGE 486
F D + + AC + F ++ YD S+ + ++ SR G L E
Sbjct: 135 LRFGLDGFTLSGVIIACGDDVGLVRQLHCFVVVCGYDCYASVNN--AVLACYSRKGFLNE 192
Query: 487 AYEFIKKIPM--APDSVMWGALLGGCVSH 513
A +++ D V W A++ C H
Sbjct: 193 ARRVFREMGEGGGRDEVSWNAMIVACGQH 221
>gi|225448223|ref|XP_002266190.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990
[Vitis vinifera]
Length = 707
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 181/550 (32%), Positives = 274/550 (49%), Gaps = 38/550 (6%)
Query: 54 NETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLG 113
+ PN + ++ + G EAI + MQ G+ N T VL CA G
Sbjct: 92 TQAPNSFLCNTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELGAVFG 151
Query: 114 KEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCEN 173
+ HG + R GF S+ FV LVD+Y +CG+
Sbjct: 152 EVVHGQVVRTGFGSDLFVEAALVDMYAKCGE----------------------------- 182
Query: 174 GNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFT 233
+ +A E+FD+M + R ++ W +MI+ Y +A +FR + +G T
Sbjct: 183 --IGDAHEVFDRM----LIRDVVCWTAMITLYEQAERPLKALMLFRKM-QEEGFLGDEIT 235
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
SV A + R +H A+ G D VG ++V MY + ++ A++ FD +E
Sbjct: 236 AISVASAVGQLGDGRMAISVHGYAVLNGFIGDVSVGNSIVGMYAKCGNVERARLVFDRME 295
Query: 294 NIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ 353
+ G+ N +A+ LF++M + + P+ T I++SACS L + G++
Sbjct: 296 ERNGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRK 355
Query: 354 VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYK--RISTPDLVSQNAMLTAYAMH 411
+H + I D D + A++DMY KCG L A + + D+ S N +++ Y +H
Sbjct: 356 LHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVH 415
Query: 412 GHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHY 471
GHGKE + F R+ G P+ I+F S LSAC HAG I G + F M V+P +KHY
Sbjct: 416 GHGKEALELFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCFADMTKLSVRPEMKHY 475
Query: 472 TCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEP 531
CMVD+L RAG L EA+ IKKIP P +WGALL C HGN E G+IAA+ L +LEP
Sbjct: 476 ACMVDMLGRAGFLNEAFRLIKKIPSRPSDEVWGALLLACRIHGNTELGEIAANNLFQLEP 535
Query: 532 NNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHD 591
+TG YV+++N++A + +W ++ RQ MK R + K S IE E+H F +D+S
Sbjct: 536 EHTGYYVLMSNIYAASNKWKEVEMVRQNMKSRGLKKPAAFSVIEFGTEVHGFHTADQSSP 595
Query: 592 RSEEIYTIID 601
E+Y ++
Sbjct: 596 YYREVYRKVE 605
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 109/428 (25%), Positives = 180/428 (42%), Gaps = 53/428 (12%)
Query: 100 VLPACARLQKLSLGKEFHGYITRNGFM-SNPFVVNGLVDVYRRCGDMLSALKIFSKF--- 155
+L C L L L H ++ GF+ P + L+ +Y + GD+ SA +F
Sbjct: 31 LLQCCTSLTTLKL---IHSSLSTRGFLLHTPHFLARLIILYSKLGDLHSARTLFDHRHHH 87
Query: 156 -----SIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSL 210
N CNT++ Y G EA +L+ M+
Sbjct: 88 HHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYMQ----------------------- 124
Query: 211 YDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGG 270
R G+ +FT+ VL CA G+ +H + G SD FV
Sbjct: 125 -------------RMGVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVRTGFGSDLFVEA 171
Query: 271 ALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTP 330
ALV+MY + ++ A FD + + + +E A+ LF +M
Sbjct: 172 ALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLG 231
Query: 331 DIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAY 390
D T + SA L VH YA+ G+ DV +G ++V MYAKCG+++ ARL +
Sbjct: 232 DEITAISVASAVGQLGDGRMAISVHGYAVLNGFIGDVSVGNSIVGMYAKCGNVERARLVF 291
Query: 391 KRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIK 450
R+ + +S N+ML+ Y +G + ++ F ++ AS P+ ++ L +SAC + GS
Sbjct: 292 DRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKH 351
Query: 451 TGSEF--FDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAP-DSVMWGALL 507
G + F + + D+ +L+ ++D+ + G+L A E + D W L+
Sbjct: 352 LGRKLHNFVISSKMDIDTTLR--NAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLI 409
Query: 508 GGCVSHGN 515
G HG+
Sbjct: 410 SGYGVHGH 417
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 115/465 (24%), Positives = 187/465 (40%), Gaps = 102/465 (21%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG + DA +VF M RD +V
Sbjct: 176 MYAKCGEIGDAHEVFDRMLIRD------------------------------------VV 199
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
W+A+I + Q +A+ + +MQ EG + T SV A +L + HGY
Sbjct: 200 CWTAMITLYEQAERPLKALMLFRKMQEEGFLGDEITAISVASAVGQLGDGRMAISVHGYA 259
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
NGF+ + V N +V +Y +CG++ A +F + +N +S N+++ GY +NG +A
Sbjct: 260 VLNGFIGDVSVGNSIVGMYAKCGNVERARLVFDRMEERNGISWNSMLSGYTQNGRPTDAL 319
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LF+QM+ +P T ++ A
Sbjct: 320 SLFNQMQ------------------------------------ASECDPNPVTALIMVSA 343
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C+ + S G+++H I+ + DT + A+++MY + DL A F+ E LG
Sbjct: 344 CSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCE-----LG 398
Query: 301 KMKEDGFEPNVYTWN--------------AMQLFSEMLSLDLTPDIYTVGIILSACSSLA 346
E +V +WN A++LFS M + P+ T ILSACS
Sbjct: 399 -------ERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSILSACSHAG 451
Query: 347 TMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHA-RLAYKRISTPDLVSQNAML 405
++ G++ A + ++ +VDM + G L A RL K S P A+L
Sbjct: 452 LIDEGRKCFADMTKLSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSDEVWGALL 511
Query: 406 TAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIK 450
A +HG+ + G + P+H + +S ++A S K
Sbjct: 512 LACRIHGNTELGEIAANNLFQ--LEPEHTGYYVLMSN-IYAASNK 553
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 139/331 (41%), Gaps = 28/331 (8%)
Query: 229 PTSFTFGSVLIACADMNSLRKGKEIHALAIALG--LQSDTFVGGALVEMYCRYQDLVAAQ 286
P+ F L+ C SL K IH+ G L + F+ L+ +Y + DL +A+
Sbjct: 22 PSLHHFYDHLLQCC--TSLTTLKLIHSSLSTRGFLLHTPHFLA-RLIILYSKLGDLHSAR 78
Query: 287 MAFDE--------IENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGII 338
FD + + L + ++ A+ L+ M + + + +T +
Sbjct: 79 TLFDHRHHHHHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFV 138
Query: 339 LSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDL 398
L C+S G+ VH +R G+ SD+ + ALVDMYAKCG + A + R+ D+
Sbjct: 139 LKVCASELGAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDV 198
Query: 399 VSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDL 458
V AM+T Y + + FR++ GF D I+ +S SA G + G +
Sbjct: 199 VCWTAMITLYEQAERPLKALMLFRKMQEEGFLGDEITAISVASA---VGQLGDGRMAISV 255
Query: 459 MAYYDVKPSLKHYTC---MVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
Y + + + +V + ++ G + A ++ + + W ++L G +G
Sbjct: 256 HGYAVLNGFIGDVSVGNSIVGMYAKCGNVERARLVFDRME-ERNGISWNSMLSGYTQNGR 314
Query: 516 LE-----FGQIAADRLIELEPNNTGNYVMLA 541
F Q+ A E +PN +M++
Sbjct: 315 PTDALSLFNQMQAS---ECDPNPVTALIMVS 342
>gi|414881651|tpg|DAA58782.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
Length = 736
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 186/600 (31%), Positives = 303/600 (50%), Gaps = 77/600 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G++ DAK+VF M R N V
Sbjct: 167 MYCKLGAVSDAKRVFDGMLHR------------------------------------NAV 190
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRM--QAEGLEPNARTLSSVLPACARLQKLSLGKEFHG 118
SW+A++ G+ EEA LFR+ Q LE N ++VL A + L +G + HG
Sbjct: 191 SWAAMVSGYATGKCSEEAFE-LFRLMLQKCPLEKNEFVTTAVLSAVSVPLGLLMGTQLHG 249
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
+ ++G + V N LV +Y + M +A+++F
Sbjct: 250 LVLKDGLVGFVSVENSLVTMYAKAECMDAAMRVFGS------------------------ 285
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
+R I+W++MI+GY N + A MF + G PT FTF VL
Sbjct: 286 -----------SKERNSITWSAMITGYAQNGEANCAARMFLQM-HSSGFTPTEFTFVGVL 333
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
AC+DM +L GK+ H L + LG ++ +V ALV+MY + + A+ F ++ +++++
Sbjct: 334 NACSDMGALVVGKQTHCLMVKLGFETQVYVKSALVDMYAKCGCIGDAKDGFHQLYDVDDV 393
Query: 299 -LGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAY 357
L G N A+ L+S M + P TV +L AC+ LA ++ GKQ+HA
Sbjct: 394 VLWTAMITGHVQNGEHEEALMLYSRMDKQGIIPSYLTVTSVLRACACLAALDLGKQLHAQ 453
Query: 358 AIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEG 417
++C + +GTAL MY+KCG+L+ + + ++R+ D++S N++++ ++ HG G +
Sbjct: 454 ILKCRFSLGGSVGTALSTMYSKCGNLEDSMVVFRRMPDRDVISWNSIISVFSQHGRGSDA 513
Query: 418 IAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVD 476
+ F + G PDHI+F++ LSAC H G + G +F M Y++ P+L HY CMVD
Sbjct: 514 LDMFEEMKLEGTAPDHITFINLLSACSHMGLVDRGWFYFRAMTKDYNLIPTLDHYACMVD 573
Query: 477 LLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGN 536
+LSRAG+L EA +FI I + + +W +LG C S + + G A ++L+EL ++
Sbjct: 574 ILSRAGQLKEAKDFIDSITIDHGTCLWRIVLGACRSLRDFDVGAYAGEQLMELGTEDSSA 633
Query: 537 YVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEI 596
Y++L+N++A +W+D+ R R M+ R + K GCSW+E + +H F ++ H +E I
Sbjct: 634 YILLSNIYAAQRKWNDVERVRHLMRLRGVSKDLGCSWVELYNRVHVFVVGEQQHPEAENI 693
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 108/402 (26%), Positives = 193/402 (48%), Gaps = 14/402 (3%)
Query: 148 ALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVD 207
A K+ S N ++ YC+ G V++A+ +FD M H R +SW +M+SGY
Sbjct: 146 ACKLPSSCGSNNVFVSTALLNMYCKLGAVSDAKRVFDGMLH----RNAVSWAAMVSGYAT 201
Query: 208 NSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTF 267
+EAF +FR +L + +E F +VL A + L G ++H L + GL
Sbjct: 202 GKCSEEAFELFRLMLQKCPLEKNEFVTTAVLSAVSVPLGLLMGTQLHGLVLKDGLVGFVS 261
Query: 268 VGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLD 327
V +LV MY + + + AA F + ++ G+ N A ++F +M S
Sbjct: 262 VENSLVTMYAKAECMDAAMRVFGSSKERNSITWSAMITGYAQNGEANCAARMFLQMHSSG 321
Query: 328 LTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHAR 387
TP +T +L+ACS + + GKQ H ++ G+++ V++ +ALVDMYAKCG + A+
Sbjct: 322 FTPTEFTFVGVLNACSDMGALVVGKQTHCLMVKLGFETQVYVKSALVDMYAKCGCIGDAK 381
Query: 388 LAYKRI-STPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHA 446
+ ++ D+V AM+T + +G +E + + R+ G P +++ S L AC
Sbjct: 382 DGFHQLYDVDDVVLWTAMITGHVQNGEHEEALMLYSRMDKQGIIPSYLTVTSVLRACACL 441
Query: 447 GSIKTGSEFFD--LMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWG 504
++ G + L + + S+ T + + S+ G L ++ +++P D + W
Sbjct: 442 AALDLGKQLHAQILKCRFSLGGSVG--TALSTMYSKCGNLEDSMVVFRRMP-DRDVISWN 498
Query: 505 ALLGGCVSHGNLEFGQIAADRLIELEPNNTG-NYVMLANLFA 545
+++ HG G A D E++ T +++ NL +
Sbjct: 499 SIISVFSQHGR---GSDALDMFEEMKLEGTAPDHITFINLLS 537
>gi|125529196|gb|EAY77310.1| hypothetical protein OsI_05285 [Oryza sativa Indica Group]
Length = 785
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 182/604 (30%), Positives = 300/604 (49%), Gaps = 69/604 (11%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG + +A++VF + ERD V
Sbjct: 153 MYSKCGEMGEARRVFDVAEERD------------------------------------DV 176
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQ--KLSLGKEFHG 118
SW++++ G+ + G EE + + M+ G+ N+ L SV+ C+ + + + HG
Sbjct: 177 SWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDGTMDIAEAVHG 236
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
+ + G S+ F+V+ ++D+Y + G ++ A +F N V NT+I G+C V
Sbjct: 237 CVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETV-- 294
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
+ + EA +++ ++ R G++PT FTF SVL
Sbjct: 295 ---------------------------IGKEVASEALTLYSEVQSR-GMQPTEFTFSSVL 326
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
AC L GK+IH I Q D F+G AL+++Y + F + +
Sbjct: 327 RACNLAGYLEFGKQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIV 386
Query: 299 LGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYA 358
G N A+ LF E L L PD++T+ +++AC+SLA G+Q+ +A
Sbjct: 387 TWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFA 446
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGI 418
+ G+D +G + V MYA+ G + A ++ + + D+VS +A+++ +A HG ++ +
Sbjct: 447 TKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDAL 506
Query: 419 AHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDL 477
F ++ + P+ I+FL L+AC H G + G +++ M Y + P++KH TC+VDL
Sbjct: 507 HFFDEMVDAKVVPNEITFLGVLTACSHGGLVDEGLRYYETMNKDYGLSPTIKHCTCVVDL 566
Query: 478 LSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNY 537
L RAG L +A FI D V+W +LL C H +LE GQ+ A+R++ELEP ++ +Y
Sbjct: 567 LGRAGRLADAEAFISNGIFHADPVIWRSLLASCRIHRDLERGQLVANRIMELEPTSSASY 626
Query: 538 VMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
V+L N++ AG S ++TR MK R + K PG SWIE + +H F A D+SH S IY
Sbjct: 627 VILYNMYLDAGELSLASKTRDLMKQRGVKKEPGLSWIELKCGVHSFVAGDKSHPESSAIY 686
Query: 598 TIID 601
T ++
Sbjct: 687 TKLE 690
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 121/491 (24%), Positives = 216/491 (43%), Gaps = 83/491 (16%)
Query: 52 LDNETP--NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQK 109
L +E P N VS++ +I +++ G ++ L R + G++ + + ++ L AC+R
Sbjct: 65 LLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARRAGVDVDRFSYAAALAACSRAGH 124
Query: 110 LSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVG 169
L G+ H +G S FV N LV +Y +CG+M A ++F +++VS N+++ G
Sbjct: 125 LRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRVFDVAEERDDVSWNSLVSG 184
Query: 170 YCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEP 229
Y G ARE M+ F+M R R G+
Sbjct: 185 YVRAG----ARE------------------EMV----------RVFAMMR----RGGMGL 208
Query: 230 TSFTFGSVLIACADM--NSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQM 287
SF GSV+ C+ ++ + +H I GL SD F+ A+++MY + LV A
Sbjct: 209 NSFALGSVIKCCSGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAA 268
Query: 288 AFDEIENIENLLGKMKEDGFEPNVYTWN--------------------AMQLFSEMLSLD 327
F ++ EPNV +N A+ L+SE+ S
Sbjct: 269 LFRSVQ--------------EPNVVMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRG 314
Query: 328 LTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHAR 387
+ P +T +L AC+ +E GKQ+H I+ + D IG+AL+D+Y G ++
Sbjct: 315 MQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGF 374
Query: 388 LAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAG 447
++ D+V+ AM++ + ++ ++ F L +G +PD + S ++AC
Sbjct: 375 RCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMNACASLA 434
Query: 448 SIKTGSEFFDLMAYYDVKPSLKHYTCM----VDLLSRAGELGEAYEFIKKIPMAPDSVMW 503
+ G + + + K +T M V + +R+G++ A +++ + D V W
Sbjct: 435 VARAGEQ----IQCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQEME-SHDVVSW 489
Query: 504 GALLGGCVSHG 514
A++ HG
Sbjct: 490 SAVISCHAQHG 500
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 106/258 (41%), Gaps = 29/258 (11%)
Query: 267 FVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSL 326
F+ L+ YCR + A+ DE+ + + D + +++ +
Sbjct: 44 FLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARRA 103
Query: 327 DLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHA 386
+ D ++ L+ACS + G+ VHA AI G S V + +LV MY+KCG + A
Sbjct: 104 GVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEA 163
Query: 387 RLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSAC--- 443
R + D VS N++++ Y G +E + F + G + + S + C
Sbjct: 164 RRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGR 223
Query: 444 ----------VHAGSIKTG--SEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFI 491
VH IK G S+ F + A M+D+ ++ G L EA
Sbjct: 224 GDGTMDIAEAVHGCVIKAGLDSDVFLVSA-------------MIDMYAKKGALVEAAALF 270
Query: 492 KKIPMAPDSVMWGALLGG 509
+ + P+ VM+ ++ G
Sbjct: 271 RSV-QEPNVVMFNTMIAG 287
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 62/145 (42%), Gaps = 1/145 (0%)
Query: 373 LVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPD 432
L+ Y + G AR + + VS N ++ AY+ G + R +G D
Sbjct: 49 LLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARRAGVDVD 108
Query: 433 HISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIK 492
S+ +AL+AC AG ++ G L + + +V + S+ GE+GEA +
Sbjct: 109 RFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARR-VF 167
Query: 493 KIPMAPDSVMWGALLGGCVSHGNLE 517
+ D V W +L+ G V G E
Sbjct: 168 DVAEERDDVSWNSLVSGYVRAGARE 192
>gi|224071603|ref|XP_002303536.1| predicted protein [Populus trichocarpa]
gi|222840968|gb|EEE78515.1| predicted protein [Populus trichocarpa]
Length = 596
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 185/521 (35%), Positives = 280/521 (53%), Gaps = 15/521 (2%)
Query: 57 PNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEF 116
P+ SW I F+Q G +EA+ + +MQ +GL P+ +SS L A AR G
Sbjct: 87 PDSFSWGWAIRYFSQQGQFKEALYLYVQMQRQGLCPSTFAVSSALRAYARTTYKMGGMSI 146
Query: 117 HGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNV 176
H + GF + +V LVD+Y + GDM +A K+F + + KN VS N+I+ G+ ++GN+
Sbjct: 147 HAESYKYGFSNCVYVQTALVDLYSKLGDMNTAQKVFDELAEKNVVSWNSILSGHLKSGNL 206
Query: 177 AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGS 236
EA+ +FDQ+ ++ +ISWNSMISGY D A +F+ + ++ + G
Sbjct: 207 LEAQRVFDQIS----KKDVISWNSMISGYAKIGDMDRACVLFQQMPEKNYSSWNALISGY 262
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
V C D+ S + A+ + T + G Y + D+ +A FD+I +
Sbjct: 263 V--NCGDIKS--AWRFFDAMPERNSVSWITMIAG-----YSKCGDVDSASKLFDQIAKKD 313
Query: 297 NLLGKMKEDGFEPNVYTWNAMQLFSEMLSL--DLTPDIYTVGIILSACSSLATMERGKQV 354
L F N A+ LFSEML ++ PD T+ ++SACS L + +
Sbjct: 314 LLTFNAMISCFAQNSQPRKALWLFSEMLKAYANIQPDQMTLASVVSACSQLGDLRFASWI 373
Query: 355 HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHG 414
+Y G + D + TAL+D+YAKCGS+ A + ++ D+V+ +AM++ ++G
Sbjct: 374 ESYVNDLGTEIDDQLVTALLDLYAKCGSVDKAYELFHGLNKKDVVAYSAMISGCGINGKV 433
Query: 415 KEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCM 474
+ I F ++ + P+ +F L+AC HAG +K G FF M + + PS HY M
Sbjct: 434 ADAIKLFDMMVDAQIHPNLATFTGLLTACNHAGLVKEGYRFFSSMKDHGLVPSTDHYAIM 493
Query: 475 VDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNT 534
VDLL RAG L +AYE IK +PM P S +WGALL C H N+E G+IAA LE N T
Sbjct: 494 VDLLGRAGRLQDAYELIKSMPMQPHSGVWGALLLACNVHNNVELGEIAAQHCFNLETNAT 553
Query: 535 GNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIE 575
Y +LAN+++ AGRW D+ R R+ K++++ K GCSW E
Sbjct: 554 AYYSLLANIYSSAGRWDDVGRLRKLWKEKKLAKLSGCSWTE 594
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 97/387 (25%), Positives = 178/387 (45%), Gaps = 49/387 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y K G ++ A+KVF + E++ VSWNS+++ +G +LEA +++S D ++
Sbjct: 168 LYSKLGDMNTAQKVFDELAEKNVVSWNSILSGHLKSGNLLEAQRVFDQISKKD-----VI 222
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+++I G+ + G D + +LF+ E K + +
Sbjct: 223 SWNSMISGYAKIG-DMDRACVLFQQMPE-------------------------KNYSSW- 255
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
N L+ Y CGD+ SA + F +N VS T+I GY + G+V A
Sbjct: 256 ------------NALISGYVNCGDIKSAWRFFDAMPERNSVSWITMIAGYSKCGDVDSAS 303
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLL-MRDGIEPTSFTFGSVLI 239
+LFDQ+ ++ ++++N+MIS + NS +A +F ++L I+P T SV+
Sbjct: 304 KLFDQI----AKKDLLTFNAMISCFAQNSQPRKALWLFSEMLKAYANIQPDQMTLASVVS 359
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
AC+ + LR I + LG + D + AL+++Y + + A F + + +
Sbjct: 360 ACSQLGDLRFASWIESYVNDLGTEIDDQLVTALLDLYAKCGSVDKAYELFHGLNKKDVVA 419
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
G N +A++LF M+ + P++ T +L+AC+ ++ G + +
Sbjct: 420 YSAMISGCGINGKVADAIKLFDMMVDAQIHPNLATFTGLLTACNHAGLVKEGYRFFSSMK 479
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHA 386
G +VD+ + G L+ A
Sbjct: 480 DHGLVPSTDHYAIMVDLLGRAGRLQDA 506
>gi|414869047|tpg|DAA47604.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
Length = 694
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 183/605 (30%), Positives = 302/605 (49%), Gaps = 76/605 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KCG L DA++VF MP R N+V
Sbjct: 135 VYAKCGRLGDARRVFDGMPVR------------------------------------NIV 158
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A+I G+T + EA+ + MQ G P+ T + +L A + SL ++ HG I
Sbjct: 159 SWNAIIAGYTDSRKPAEAMELFLEMQRVGSVPDGTTFAVLLATIAGPRWYSLMRQLHGKI 218
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G SAL + V+ N I Y + +A++R
Sbjct: 219 VKYG----------------------SALGL---------VALNAAITAYSQCDALADSR 247
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
++FD +E R +ISWNSM+ Y + L DEA F ++ GI+P ++F S +
Sbjct: 248 KIFDGIE----SRDLISWNSMLGAYAYHGLDDEAMRFFVRMMRESGIQPDMYSFTSAISV 303
Query: 241 CADMN-SLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI---E 296
C++ ++G+ IH+L I GL+ T V A++ MY R+ D + A++ ++ +
Sbjct: 304 CSEHGCDDQQGRSIHSLVIKFGLEGVTPVCNAMIAMYTRFADNCMMEDAYNCFSSLVFKD 363
Query: 297 NLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHA 356
+ G+ + + +A++ F M + ++ D + + L +CS LA + G+QVH+
Sbjct: 364 AVSWNSMLTGYSHHGLSSDALKFFRCMRAENIRTDEFGLSAALRSCSDLAVLRLGRQVHS 423
Query: 357 YAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKE 416
++ G+ S+ + ++L+ MY+KCG L AR +++ V N+M+ YA HG +
Sbjct: 424 LVVQSGFASNDFVSSSLIFMYSKCGVLGDARKSFEEADKSSSVPWNSMMFGYAQHGQAQT 483
Query: 417 GIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMV 475
F +L DH++F++ ++A H G + GSE + M Y + ++HY C V
Sbjct: 484 VTDLFNEMLDLEVPLDHVTFVALITAYSHGGLVDEGSEILNTMETRYKIPMRMEHYACGV 543
Query: 476 DLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTG 535
DL RAG+L +A E I+ +P PD+++W LLG C HGN+E A L EP
Sbjct: 544 DLYGRAGQLDKAKELIESMPFQPDAIVWMTLLGACRIHGNMELASDVARHLFVAEPRQHS 603
Query: 536 NYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEE 595
YV+L+++++ G WSD A ++ M++R + K PG SWIE ++E+H F A DRSH R E
Sbjct: 604 TYVLLSSMYSGLGMWSDRATVQKVMRNRALSKIPGWSWIEVKNEVHSFNADDRSHPRMVE 663
Query: 596 IYTII 600
I+ ++
Sbjct: 664 IFDML 668
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/387 (25%), Positives = 181/387 (46%), Gaps = 19/387 (4%)
Query: 138 VYRRCGDMLSALKIFS---KFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRG 194
++RR L+A K + K + N ++ Y G +A AR +FD++ H
Sbjct: 1 MHRRQHHALAAAKSHATLLKSGASSPTPWNQLLTAYSATG-LAAARRVFDEIPHPDAA-- 57
Query: 195 IISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIH 254
SWNS+++ +V + +A+ + R + R G+ ++F GS L + A G ++
Sbjct: 58 --SWNSLLAAHVAAGAHRDAWRLLRAMHAR-GLAASTFALGSALRSAAAARRPELGAQLQ 114
Query: 255 ALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFD--EIENIENLLGKMKEDGFEPNVY 312
+ ++ GL + F AL+++Y + L A+ FD + NI + + G+ +
Sbjct: 115 SFSVRCGLADNVFPASALLDVYAKCGRLGDARRVFDGMPVRNIVSWNAIIA--GYTDSRK 172
Query: 313 TWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTA 372
AM+LF EM + PD T ++L+ + +Q+H ++ G + A
Sbjct: 173 PAEAMELFLEMQRVGSVPDGTTFAVLLATIAGPRWYSLMRQLHGKIVKYGSALGLVALNA 232
Query: 373 LVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRIL-ASGFRP 431
+ Y++C +L +R + I + DL+S N+ML AYA HG E + F R++ SG +P
Sbjct: 233 AITAYSQCDALADSRKIFDGIESRDLISWNSMLGAYAYHGLDDEAMRFFVRMMRESGIQP 292
Query: 432 DHISFLSALSACV-HAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGE---LGEA 487
D SF SA+S C H + G L+ + ++ M+ + +R + + +A
Sbjct: 293 DMYSFTSAISVCSEHGCDDQQGRSIHSLVIKFGLEGVTPVCNAMIAMYTRFADNCMMEDA 352
Query: 488 YEFIKKIPMAPDSVMWGALLGGCVSHG 514
Y + + D+V W ++L G HG
Sbjct: 353 YNCFSSL-VFKDAVSWNSMLTGYSHHG 378
>gi|225453947|ref|XP_002274056.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Vitis vinifera]
Length = 635
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 190/547 (34%), Positives = 293/547 (53%), Gaps = 14/547 (2%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
N W+A+I F+ EA + M G+ + + S VL AC+RL + G + H
Sbjct: 86 NPFLWNAIIKSFSHGEDPREAFVIFNLMLENGVCVDKFSFSLVLKACSRLGLIKEGMQIH 145
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
G + R S+ F+ N L+ +Y RCG + A ++F + ++ VS N++I GY ++G V
Sbjct: 146 GLLGRMEIGSDVFLQNCLMCLYLRCGCLGIARQLFDRMMKRDSVSFNSMIDGYVKHGMVK 205
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSL-YDEAFSMFRDLLMRDGIEPTSFTFGS 236
ARELFD M Q+ +ISWNSMISGY + A+ +F ++ RD I S G
Sbjct: 206 SARELFDVMPM--EQKNLISWNSMISGYARSEEGLRVAWELFEEMPKRDLISWNSMIDGC 263
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
V C M + H L + + D +V+ Y + ++ A+ FDE+ +
Sbjct: 264 V--KCGKM------ENAHHLFNQMP-KRDVVSWANMVDGYAKLGEIDIARGLFDEMPERD 314
Query: 297 NLLGKMKEDGFEPNVYTWNAMQLFSEMLSL-DLTPDIYTVGIILSACSSLATMERGKQVH 355
+ G+ N + A+ F +MLS +L PD T+ I LSA + L + G +H
Sbjct: 315 VISCNAMMAGYVQNGHLMEALNFFHDMLSRKELFPDNATLLITLSAIAQLGHFDEGVALH 374
Query: 356 AYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGK 415
Y G+ +G AL+DMYAKCGS+ +A ++ I + NA++ A+HG G+
Sbjct: 375 CYIEDNGFSLSEKLGVALIDMYAKCGSIDNALSVFEDIDDKSIDHWNAIIGGLAIHGLGE 434
Query: 416 EGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCM 474
F + +PD I+F+ L+AC HAG +K G F+LM + V+P L+HY CM
Sbjct: 435 VAFELFMEMEKLFVKPDDITFIGVLNACNHAGLVKEGLMCFELMRRVHKVEPKLQHYGCM 494
Query: 475 VDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNT 534
VD+L RAG + EA +F++K+P+ P+ V+W LL C +H N G+ A LI ++ N
Sbjct: 495 VDILGRAGHVEEAKKFVEKMPIEPNDVVWRTLLSACRNHENFTIGEPVAKHLISVDSYNP 554
Query: 535 GNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSE 594
+YV+L+N++A G W+D+ R R MK R + K PGCS IE +H+F D+SH +
Sbjct: 555 SSYVLLSNIYAGFGMWNDVYRIRMMMKQRDLKKIPGCSQIELEGNVHEFFVRDKSHPQVR 614
Query: 595 EIYTIID 601
EIY+++D
Sbjct: 615 EIYSMLD 621
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 106/424 (25%), Positives = 195/424 (45%), Gaps = 69/424 (16%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y +CG L A+++F M +RD VS+NS++ +G+V A E + M E NL+
Sbjct: 166 LYLRCGCLGIARQLFDRMMKRDSVSFNSMIDGYVKHGMVKSARELFDVMPM---EQKNLI 222
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+++I G+ ++ EE + + + + E + + + +S++ C
Sbjct: 223 SWNSMISGYARS---EEGLRVAWELFEEMPKRDLISWNSMIDGCV--------------- 264
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+CG M +A +F++ ++ VS ++ GY + G + AR
Sbjct: 265 --------------------KCGKMENAHHLFNQMPKRDVVSWANMVDGYAKLGEIDIAR 304
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LFD+M +R +IS N+M++GYV N EA + F D+L R + P + T L A
Sbjct: 305 GLFDEMP----ERDVISCNAMMAGYVQNGHLMEALNFFHDMLSRKELFPDNATLLITLSA 360
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIEN--IEN- 297
A + +G +H G +G AL++MY + + A F++I++ I++
Sbjct: 361 IAQLGHFDEGVALHCYIEDNGFSLSEKLGVALIDMYAKCGSIDNALSVFEDIDDKSIDHW 420
Query: 298 --LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG---- 351
++G + G A +LF EM L + PD T +L+AC+ ++ G
Sbjct: 421 NAIIGGLAIHGLGE-----VAFELFMEMEKLFVKPDDITFIGVLNACNHAGLVKEGLMCF 475
Query: 352 ---KQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST-PDLVSQNAMLTA 407
++VH + H G +VD+ + G ++ A+ +++ P+ V +L+A
Sbjct: 476 ELMRRVHKVEPKLQ-----HYG-CMVDILGRAGHVEEAKKFVEKMPIEPNDVVWRTLLSA 529
Query: 408 YAMH 411
H
Sbjct: 530 CRNH 533
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 60/149 (40%), Gaps = 38/149 (25%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVV------------------------------ 30
MY KCGS+D+A VF+ + ++ WN+++
Sbjct: 395 MYAKCGSIDNALSVFEDIDDKSIDHWNAIIGGLAIHGLGEVAFELFMEMEKLFVKPDDIT 454
Query: 31 -----TACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRM 85
AC GLV E L C E M + P L + ++ + G+ EEA + +M
Sbjct: 455 FIGVLNACNHAGLVKEGLMCFELMRRVHKVEPKLQHYGCMVDILGRAGHVEEAKKFVEKM 514
Query: 86 QAEGLEPNARTLSSVLPACARLQKLSLGK 114
+EPN ++L AC + ++G+
Sbjct: 515 P---IEPNDVVWRTLLSACRNHENFTIGE 540
>gi|212275047|ref|NP_001130303.1| uncharacterized protein LOC100191397 [Zea mays]
gi|194688792|gb|ACF78480.1| unknown [Zea mays]
Length = 706
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 176/627 (28%), Positives = 307/627 (48%), Gaps = 77/627 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGS+ DA ++F MP +PN V
Sbjct: 85 MYTKCGSVADAVRLFDGMP------------------------------------SPNEV 108
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARL--------QKLSL 112
S++A++GG Q G ++A+ + RM G+ + +SSVL ACA+ + + L
Sbjct: 109 SFTAMMGGLAQGGAVDDALRLFARMSRTGIRVDPVAVSSVLGACAQACAGDYNVARAIQL 168
Query: 113 GKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCE 172
+ H + R GF S+ V N LVD+Y + M A+K+F S + VS N +I GY +
Sbjct: 169 AQSIHALVVRKGFGSDQHVGNSLVDLYAKGMKMDEAIKVFESLSSVSIVSWNILITGYGQ 228
Query: 173 NGNVAEARELFDQMEHLGVQRG-------------------------------IISWNSM 201
G A E+ + M+ G + + +WN++
Sbjct: 229 LGCYERAMEVLEFMQESGFEPNEVTYSNMLASCIKARDVPSARAMFDKIPKPSVTTWNTL 288
Query: 202 ISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALG 261
+SGY L+ E +FR + ++ ++P T +L +C+ + + GK++H+ ++ L
Sbjct: 289 LSGYGQEELHQETIDLFRRMQHQN-VQPDRTTLAVILSSCSRLGNFELGKQVHSASVRLL 347
Query: 262 LQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFS 321
L +D FV L+++Y + + A + F+ + + + G + + A
Sbjct: 348 LHNDMFVASGLIDIYSKCGQVGIALIIFNMMTERDVVCWNSMISGLAIHSLSEEAFDFLK 407
Query: 322 EMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCG 381
+M + P + +++ C+ L+++ +G+Q+HA ++ GYD +V++G +L+DMYAK G
Sbjct: 408 QMRENGMFPTESSYASMINLCARLSSIPQGRQMHAQVLKDGYDQNVYVGCSLIDMYAKSG 467
Query: 382 SLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALS 441
++ ARL + + +LV+ N M+ YA +G G++ + F +L + +PD ++F++ L+
Sbjct: 468 NMDDARLFFNCMIVKNLVAWNEMIHGYAQNGFGEKAVELFEYMLTTKQKPDSVTFIAVLT 527
Query: 442 ACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDS 500
C H+G + FF+ M + Y + P ++HYTC++D L+RA E I K+P D
Sbjct: 528 GCSHSGLVDEAVTFFNSMESNYGITPLVEHYTCLIDALARAARFAEVEAVIGKMPYKDDP 587
Query: 501 VMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKM 560
++W LL CV H N E G+ +A L L+P N YV+L+N++A GR D + R M
Sbjct: 588 ILWEVLLAACVVHHNAELGEFSAKHLFRLDPKNPSPYVLLSNIYATLGRHGDASAVRALM 647
Query: 561 KDRRMHKSPGCSWIEDRDEIHKFRASD 587
R + K G SW+ +D F +D
Sbjct: 648 SSRGVVKGRGYSWVNHKDGSRAFMVAD 674
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 145/581 (24%), Positives = 241/581 (41%), Gaps = 150/581 (25%)
Query: 18 MPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEE 77
MP+R+ VSWN+V+ A A +G EALE +
Sbjct: 1 MPDRNAVSWNTVIAAVARSGSPGEALEMYQ------------------------------ 30
Query: 78 AIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVD 137
GML EGL P TL+SVL AC + L G+ HG + G + FV NGL+
Sbjct: 31 --GML----QEGLAPTNFTLASVLSACGAVAALDDGRRCHGLAVKVGLDGHQFVENGLLG 84
Query: 138 VYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIIS 197
+Y +CG + A+++F NEVS ++ G + G V +A LF +M G++
Sbjct: 85 MYTKCGSVADAVRLFDGMPSPNEVSFTAMMGGLAQGGAVDDALRLFARMSRTGIR----- 139
Query: 198 WNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACA-----DMNSLRK--- 249
++P + + SVL ACA D N R
Sbjct: 140 -----------------------------VDPVAVS--SVLGACAQACAGDYNVARAIQL 168
Query: 250 GKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE------------- 296
+ IHAL + G SD VG +LV++Y + + A F+ + ++
Sbjct: 169 AQSIHALVVRKGFGSDQHVGNSLVDLYAKGMKMDEAIKVFESLSSVSIVSWNILITGYGQ 228
Query: 297 --------NLLGKMKEDGFEPN-------------------------------VYTWNAM 317
+L M+E GFEPN V TWN +
Sbjct: 229 LGCYERAMEVLEFMQESGFEPNEVTYSNMLASCIKARDVPSARAMFDKIPKPSVTTWNTL 288
Query: 318 --------------QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGY 363
LF M ++ PD T+ +ILS+CS L E GKQVH+ ++R
Sbjct: 289 LSGYGQEELHQETIDLFRRMQHQNVQPDRTTLAVILSSCSRLGNFELGKQVHSASVRLLL 348
Query: 364 DSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRR 423
+D+ + + L+D+Y+KCG + A + + ++ D+V N+M++ A+H +E ++
Sbjct: 349 HNDMFVASGLIDIYSKCGQVGIALIIFNMMTERDVVCWNSMISGLAIHSLSEEAFDFLKQ 408
Query: 424 ILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGE 483
+ +G P S+ S ++ C SI G + + ++ ++D+ +++G
Sbjct: 409 MRENGMFPTESSYASMINLCARLSSIPQGRQMHAQVLKDGYDQNVYVGCSLIDMYAKSGN 468
Query: 484 LGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAAD 524
+ +A F + + + V W ++ G +G FG+ A +
Sbjct: 469 MDDARLFFNCM-IVKNLVAWNEMIHGYAQNG---FGEKAVE 505
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 106/237 (44%), Gaps = 11/237 (4%)
Query: 316 AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVD 375
A++++ ML L P +T+ +LSAC ++A ++ G++ H A++ G D + L+
Sbjct: 25 ALEMYQGMLQEGLAPTNFTLASVLSACGAVAALDDGRRCHGLAVKVGLDGHQFVENGLLG 84
Query: 376 MYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHIS 435
MY KCGS+ A + + +P+ VS AM+ A G + + F R+ +G R D ++
Sbjct: 85 MYTKCGSVADAVRLFDGMPSPNEVSFTAMMGGLAQGGAVDDALRLFARMSRTGIRVDPVA 144
Query: 436 FLSALSACVH--------AGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEA 487
S L AC A +I+ L+ +VDL ++ ++ EA
Sbjct: 145 VSSVLGACAQACAGDYNVARAIQLAQSIHALVVRKGFGSDQHVGNSLVDLYAKGMKMDEA 204
Query: 488 YEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIE--LEPNNTGNYVMLAN 542
+ + + + V W L+ G G E + + E EPN MLA+
Sbjct: 205 IKVFESLS-SVSIVSWNILITGYGQLGCYERAMEVLEFMQESGFEPNEVTYSNMLAS 260
>gi|125555495|gb|EAZ01101.1| hypothetical protein OsI_23130 [Oryza sativa Indica Group]
Length = 766
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 190/598 (31%), Positives = 304/598 (50%), Gaps = 74/598 (12%)
Query: 22 DCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGM 81
D + N++VT + NGLV + ER+ D L+SW ++I GF Q G++ EA+ +
Sbjct: 186 DLIVQNALVTMYSKNGLVDDGFMLFERIKDKD-----LISWGSIIAGFAQQGFEMEALQV 240
Query: 82 LFRMQAEGLE-PNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYR 140
+M EG PN S AC + G++ HG + + +V L D+Y
Sbjct: 241 FRKMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMYA 300
Query: 141 RCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNS 200
R ++ SA F + EA +L +SWNS
Sbjct: 301 RFKNLDSARVAFYRI----------------------EAPDL-------------VSWNS 325
Query: 201 MISGYVDNSLYDEAFSMFRDLLMRD-GIEPTSFTFGSVLIACADMNSLRKGKEIHALAIA 259
+++ Y L EA +F + MRD G+ P T +L AC ++L G+ IH+ +
Sbjct: 326 IVNAYSVEGLLSEALVLFSE--MRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVK 383
Query: 260 LGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNA--- 316
LGL D V +L+ MY R DL +A F EI+ + +V TWN+
Sbjct: 384 LGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIK--------------DQDVVTWNSILT 429
Query: 317 -----------MQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDS 365
++LFS + + + D ++ +LSA + L E KQVHAYA + G
Sbjct: 430 ACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVD 489
Query: 366 DVHIGTALVDMYAKCGSLKHA-RLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRI 424
D + L+D YAKCGSL A RL + D+ S ++++ YA G+ KE + F R+
Sbjct: 490 DRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEALDLFSRM 549
Query: 425 LASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMVDLLSRAGE 483
+ G RP+H++F+ L+AC G + G ++ +M Y + P+ +H +C+VDLL+RAG+
Sbjct: 550 RSLGIRPNHVTFIGVLTACSRVGFVNEGCYYYSIMEPEYGIVPTREHCSCIVDLLARAGK 609
Query: 484 LGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANL 543
L EA FI ++P PD +MW LL H ++E G+ AA+ ++ ++P+++ YV+L N+
Sbjct: 610 LTEAANFIDQMPFEPDIIMWKTLLAASKMHNDMEMGKRAAEGILNIDPSHSAAYVLLCNI 669
Query: 544 FAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
+A +G W++ AR ++ M+ + KSPG SW++ + E+ F DRSH SEEIY +++
Sbjct: 670 YAASGNWNEFARLKKAMRTSGVKKSPGKSWVKLKGELKVFIVEDRSHPESEEIYAMLE 727
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 141/532 (26%), Positives = 221/532 (41%), Gaps = 107/532 (20%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYG+C + D A++VF MP R N V
Sbjct: 95 MYGRCAAPDSARQVFDEMPAR------------------------------------NPV 118
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW++VI QNG +A+G+ M G + L S + AC L + G++ H +
Sbjct: 119 SWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELGDVGTGRQVHAHA 178
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
++ S+ V N LV +Y + G + +F + K+ +S +II G+ + G
Sbjct: 179 LKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAGFAQQG------ 232
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
F+ EA +FR +++ P F FGS A
Sbjct: 233 --FEM---------------------------EALQVFRKMIVEGSHHPNEFHFGSAFRA 263
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C + S G++IH L+I L D +VG +L +MY R+++L +A++AF IE
Sbjct: 264 CGAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMYARFKNLDSARVAFYRIE------- 316
Query: 301 KMKEDGFEPNVYTWN--------------AMQLFSEMLSLDLTPDIYTVGIILSACSSLA 346
P++ +WN A+ LFSEM L PD TV +L AC
Sbjct: 317 -------APDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRD 369
Query: 347 TMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLT 406
+ G+ +H+Y ++ G D DV + +L+ MYA+C L A + I D+V+ N++LT
Sbjct: 370 ALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILT 429
Query: 407 AYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKP 466
A A H H +E + F + S D IS + LSA G E + Y K
Sbjct: 430 ACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSASAELGYF----EMVKQVHAYAFKA 485
Query: 467 SLKH----YTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
L ++D ++ G L +A + + D W +L+ G G
Sbjct: 486 GLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFG 537
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 113/421 (26%), Positives = 195/421 (46%), Gaps = 31/421 (7%)
Query: 98 SSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSI 157
++++ AC+RL+ L G+ H ++ + S + G
Sbjct: 48 AALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAG----------------------- 84
Query: 158 KNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSM 217
N V N +I Y AR++FD+M R +SW S+I+ +V N +A +
Sbjct: 85 -NTVLGNHLITMYGRCAAPDSARQVFDEMP----ARNPVSWASVIAAHVQNGRAGDALGL 139
Query: 218 FRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYC 277
F +L R G F GS + AC ++ + G+++HA A+ SD V ALV MY
Sbjct: 140 FSSML-RSGTAADQFALGSAVRACTELGDVGTGRQVHAHALKSERGSDLIVQNALVTMYS 198
Query: 278 RYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEML-SLDLTPDIYTVG 336
+ + M F+ I++ + + GF + A+Q+F +M+ P+ + G
Sbjct: 199 KNGLVDDGFMLFERIKDKDLISWGSIIAGFAQQGFEMEALQVFRKMIVEGSHHPNEFHFG 258
Query: 337 IILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTP 396
AC ++ + E G+Q+H +I+ D D+++G +L DMYA+ +L AR+A+ RI P
Sbjct: 259 SAFRACGAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMYARFKNLDSARVAFYRIEAP 318
Query: 397 DLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFF 456
DLVS N+++ AY++ G E + F + SG RPD I+ L ACV ++ G
Sbjct: 319 DLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGRLIH 378
Query: 457 DLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNL 516
+ + + ++ + +R +L A + +I D V W ++L C H +
Sbjct: 379 SYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIK-DQDVVTWNSILTACAQHNHP 437
Query: 517 E 517
E
Sbjct: 438 E 438
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 133/282 (47%), Gaps = 9/282 (3%)
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALG-------LQSDTFVGGALVEMYCRYQDLVAAQ 286
+ +++ AC+ + SL +G+ +H +A L +T +G L+ MY R +A+
Sbjct: 47 YAALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRCAAPDSAR 106
Query: 287 MAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLA 346
FDE+ + N +A+ LFS ML D + +G + AC+ L
Sbjct: 107 QVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELG 166
Query: 347 TMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLT 406
+ G+QVHA+A++ SD+ + ALV MY+K G + + ++RI DL+S +++
Sbjct: 167 DVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIA 226
Query: 407 AYAMHGHGKEGIAHFRRILASG-FRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVK 465
+A G E + FR+++ G P+ F SA AC GS + G + L Y +
Sbjct: 227 GFAQQGFEMEALQVFRKMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLD 286
Query: 466 PSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALL 507
L + D+ +R L A +I APD V W +++
Sbjct: 287 RDLYVGCSLSDMYARFKNLDSARVAFYRIE-APDLVSWNSIV 327
>gi|359483597|ref|XP_002272690.2| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial [Vitis vinifera]
Length = 676
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 178/580 (30%), Positives = 313/580 (53%), Gaps = 21/580 (3%)
Query: 25 SWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFR 84
S+ S++T N + EA +++S P++ ++ +I G+ +N + A+ + +
Sbjct: 13 SYQSMITDHLRNQRIDEARTVFDKVS-----FPDVYLYTMMITGYARNYRFDHALQLFYE 67
Query: 85 MQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGD 144
M + + + +S++ C L++ ++ + +S ++NG + G
Sbjct: 68 MPVK----DVVSWNSMIKGCFDCADLTMARKLFDEMPERSVVSWTTMINGFLQF----GK 119
Query: 145 MLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISG 204
+ A +F K ++ + N++I GYC NG V + LF +M R +ISW SMI G
Sbjct: 120 IEVAEGLFYKMPFRDIAAWNSMIYGYCCNGRVEDGLRLFQEMP----CRNVISWTSMIGG 175
Query: 205 YVDNSLYDEAFSMFRDLLMRDGIE--PTSFTFGSVLIACADMNSLRKGKEIHALAIALGL 262
+ +EA +FR + M G+E PTS T+ V+ ACA+ ++L +G +IHA LG
Sbjct: 176 LDQHGRSEEALGLFRQM-MGCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGY 234
Query: 263 QSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSE 322
D ++ AL+ Y + + + F ++ ++ G+ N +A+++F E
Sbjct: 235 SFDAYISAALITFYANCKQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGE 294
Query: 323 MLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGS 382
M+ + P+ + L++C L ++ G+++H A++ G ++DV +G +L+ MY +CG+
Sbjct: 295 MMREGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGN 354
Query: 383 LKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSA 442
L + +KRIS ++VS N+++ A HG G +A F +++ S PD I+F LSA
Sbjct: 355 LNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLSA 414
Query: 443 CVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSV 501
C H+G + G F + + L HY CMVD+L R+G+L EA E I+ +P+ +S+
Sbjct: 415 CSHSGMSQKGRCLFKYFSENKSAEVKLDHYACMVDILGRSGKLEEAEELIRNMPVKANSM 474
Query: 502 MWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMK 561
+W LL C H LE + AA +I+LEP+ + YV+L+NL+A A RWSD++R R++MK
Sbjct: 475 VWLVLLSACTMHSKLEVAERAAKCIIDLEPHCSSAYVLLSNLYASASRWSDVSRIRREMK 534
Query: 562 DRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
R + K PG SWI + ++F + DRSH S+ IY ++
Sbjct: 535 QRGITKQPGRSWITIKGWRNEFLSGDRSHPSSDRIYQKLE 574
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 111/429 (25%), Positives = 188/429 (43%), Gaps = 83/429 (19%)
Query: 6 GSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAV 65
G ++ A+ +F MP RD +WNS++ NG V + L + M N++SW+++
Sbjct: 118 GKIEVAEGLFYKMPFRDIAAWNSMIYGYCCNGRVEDGLRLFQEMP-----CRNVISWTSM 172
Query: 66 IGGFTQNGYDEEAIGMLFRMQAEGLE--PNARTLSSVLPACARLQKLSLGKEFHGYITRN 123
IGG Q+G EEA+G+ +M G+E P + T V+ ACA L G + H ++ +
Sbjct: 173 IGGLDQHGRSEEALGLFRQMMGCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKL 232
Query: 124 GFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELF 183
G+ + ++ L+ Y C M +L++F N V ++ GY N +A ++F
Sbjct: 233 GYSFDAYISAALITFYANCKQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVF 292
Query: 184 DQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACAD 243
+M MR+G+ P +F S L +C
Sbjct: 293 GEM------------------------------------MREGVLPNQSSFTSALNSCCG 316
Query: 244 MNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMK 303
+ +L G+EIH A+ LGL++D FVG +L+ MY R +L + F I
Sbjct: 317 LEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRIS---------- 366
Query: 304 EDGFEPNVYTWN--------------AMQLFSEMLSLDLTPDIYTVGIILSACSSLATME 349
+ N+ +WN A+ F++M+ + PD T +LSACS +
Sbjct: 367 ----KKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQ 422
Query: 350 RGKQVHAYAIRCGYDSDVHIG--TALVDMYAKCGSLKHARLAYKRISTPDLVSQNAM--- 404
+G+ + Y ++V + +VD+ + G L+ A + + V N+M
Sbjct: 423 KGRCLFKYFSE-NKSAEVKLDHYACMVDILGRSGKLEEAEELIRNMP----VKANSMVWL 477
Query: 405 --LTAYAMH 411
L+A MH
Sbjct: 478 VLLSACTMH 486
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +CG+L+D +FK + +++ VSWNSV+ CA +G + AL +M E P+ +
Sbjct: 348 MYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVE-PDEI 406
Query: 61 SWSAVIGGFTQNGYDEEA 78
+++ ++ + +G ++
Sbjct: 407 TFTGLLSACSHSGMSQKG 424
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 48/247 (19%), Positives = 105/247 (42%), Gaps = 17/247 (6%)
Query: 266 TFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLS 325
TF +++ + R Q + A+ FD++ + L M G+ N +A+QLF EM
Sbjct: 11 TFSYQSMITDHLRNQRIDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEM-- 68
Query: 326 LDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKH 385
D+ + ++ C A + +++ + V T +++ + + G ++
Sbjct: 69 --PVKDVVSWNSMIKGCFDCADLTMARKLFDEMP----ERSVVSWTTMINGFLQFGKIEV 122
Query: 386 ARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVH 445
A + ++ D+ + N+M+ Y +G ++G+ F+ + IS+ S +
Sbjct: 123 AEGLFYKMPFRDIAAWNSMIYGYCCNGRVEDGLRLFQEMPCRNV----ISWTSMIGGLDQ 178
Query: 446 AGSIKTGSEFFDLM--AYYDVKPSLKHYTCMVDLLSRAGELGEAYEF---IKKIPMAPDS 500
G + F M +VKP+ Y C++ + A L + + + K+ + D+
Sbjct: 179 HGRSEEALGLFRQMMGCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDA 238
Query: 501 VMWGALL 507
+ AL+
Sbjct: 239 YISAALI 245
>gi|356498743|ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 573
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 162/470 (34%), Positives = 272/470 (57%), Gaps = 11/470 (2%)
Query: 136 VDVYRRCGDMLSALKIFSKF----SIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGV 191
+D+ RC ++ ++ + ++++ V N ++ Y ++ + +A LFD +
Sbjct: 7 IDLLLRCRNVFHIRQVHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGL----T 62
Query: 192 QRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGK 251
R +W+ M+ G+ + ++ FR+LL R G+ P ++T V+ C D L+ G+
Sbjct: 63 MRDSKTWSVMVGGFAKAGDHAGCYATFRELL-RCGVTPDNYTLPFVIRTCRDRTDLQIGR 121
Query: 252 EIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNV 311
IH + + GL SD FV +LV+MY + + AQ F+ + + ++L+ G +
Sbjct: 122 VIHDVVLKHGLLSDHFVCASLVDMYAKCIVVEDAQRLFERMLS-KDLVTWTVMIGAYADC 180
Query: 312 YTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGT 371
+ ++ LF M + PD + +++AC+ L M R + + Y +R G+ DV +GT
Sbjct: 181 NAYESLVLFDRMREEGVVPDKVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDVILGT 240
Query: 372 ALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRP 431
A++DMYAKCGS++ AR + R+ +++S +AM+ AY HG GK+ I F +L+ P
Sbjct: 241 AMIDMYAKCGSVESAREVFDRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAILP 300
Query: 432 DHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMVDLLSRAGELGEAYEF 490
+ ++F+S L AC HAG I+ G FF+ M + V+P +KHYTCMVDLL RAG L EA
Sbjct: 301 NRVTFVSLLYACSHAGLIEEGLRFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALRL 360
Query: 491 IKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRW 550
I+ + + D +W ALLG C H +E + AA+ L+EL+P N G+YV+L+N++A AG+W
Sbjct: 361 IEAMTVEKDERLWSALLGACRIHSKMELAEKAANSLLELQPQNPGHYVLLSNIYAKAGKW 420
Query: 551 SDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTII 600
+A+ R M R++ K PG +WIE ++ ++F DRSH +S+EIY ++
Sbjct: 421 EKVAKFRDMMTQRKLKKIPGWTWIEVDNKTYQFSVGDRSHPQSKEIYEML 470
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 106/466 (22%), Positives = 189/466 (40%), Gaps = 83/466 (17%)
Query: 21 RDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIG 80
+D V N ++ A + + +A + ++ D++T WS ++GGF + G
Sbjct: 33 QDLVIANKLLYTYAQHKAIDDAYSLFDGLTMRDSKT-----WSVMVGGFAKAGDHAGCYA 87
Query: 81 MLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYR 140
+ G+ P+ TL V+ C L +G+ H + ++G +S+ FV LVD+Y
Sbjct: 88 TFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHGLLSDHFVCASLVDMYA 147
Query: 141 RCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNS 200
+C + A ++F + K+ V+ T+++G + N E+ LFD+M
Sbjct: 148 KCIVVEDAQRLFERMLSKDLVTW-TVMIGAYADCNAYESLVLFDRMR------------- 193
Query: 201 MISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIAL 260
+G+ P +V+ ACA + ++ + + + +
Sbjct: 194 -----------------------EEGVVPDKVAMVTVVNACAKLGAMHRARFANDYIVRN 230
Query: 261 GLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAM--- 317
G D +G A+++MY + + +A+ FD ++ E NV +W+AM
Sbjct: 231 GFSLDVILGTAMIDMYAKCGSVESAREVFDRMK--------------EKNVISWSAMIAA 276
Query: 318 -----------QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV-----HAYAIRC 361
LF MLS + P+ T +L ACS +E G + +A+R
Sbjct: 277 YGYHGRGKDAIDLFHMMLSCAILPNRVTFVSLLYACSHAGLIEEGLRFFNSMWEEHAVR- 335
Query: 362 GYDSDVHIGTALVDMYAKCGSLKHA-RLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
DV T +VD+ + G L A RL D +A+L A +H +
Sbjct: 336 ---PDVKHYTCMVDLLGRAGRLDEALRLIEAMTVEKDERLWSALLGACRIHSKMELAEKA 392
Query: 421 FRRILA-SGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVK 465
+L P H LS + A AG + ++F D+M +K
Sbjct: 393 ANSLLELQPQNPGHYVLLSNIYA--KAGKWEKVAKFRDMMTQRKLK 436
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 58/111 (52%), Gaps = 2/111 (1%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGS++ A++VF M E++ +SW++++ A +G +A++ M S PN V
Sbjct: 245 MYAKCGSVESAREVFDRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSC-AILPNRV 303
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKL 110
++ +++ + G EE + M E + P+ + + ++ R +L
Sbjct: 304 TFVSLLYACSHAGLIEEGLRFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRL 354
>gi|218188593|gb|EEC71020.1| hypothetical protein OsI_02714 [Oryza sativa Indica Group]
Length = 825
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 176/588 (29%), Positives = 293/588 (49%), Gaps = 74/588 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC S +DA +VF + E P++V
Sbjct: 306 MYSKCLSAEDAYEVFARIDE------------------------------------PDVV 329
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
S +I F ++ EA + +M G++PN T + +R ++L + H +I
Sbjct: 330 HCSLMISCFDRHDMAPEAFDIFMQMSDMGVKPNQYTFVGLAIVASRTGDVNLCRSIHAHI 389
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
++GF V C+ I+ Y + G V +A
Sbjct: 390 VKSGFSRTKGV-------------------------------CDAIVGMYVKTGAVQDAI 418
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
FD M+ I SWN+++SG+ + + +F++L+ +G+ +T+ +L
Sbjct: 419 LAFDLMQ----GPDIASWNTLLSGFYSGNNCEHGLRIFKELIC-EGVLANKYTYVGILRC 473
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C + LR G ++HA + G Q D V L++MY + A++ FD ++ +
Sbjct: 474 CTSLMDLRFGCQVHACVLKSGFQGDYDVSKMLLDMYVQAGCFTNARLVFDRLKERDVFSW 533
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
+ + A++ F ML + P+ T+ LS CS LA + G Q+H+Y I+
Sbjct: 534 TVVMSTYAKTDEGEKAIECFRSMLRENKRPNDATLATSLSVCSDLACLGSGLQLHSYTIK 593
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
G++S V + +ALVDMY KCG+L A + + T DLV N ++ YA HGHG + +
Sbjct: 594 SGWNSSV-VSSALVDMYVKCGNLADAEMLFDESDTHDLVEWNTIICGYAQHGHGYKALEA 652
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLLS 479
F+ ++ G PD I+F+ LSAC HAG + G +F L++ Y + P+L+HY CMVD+L+
Sbjct: 653 FQEMIDEGNVPDEITFVGVLSACSHAGLLDEGRRYFKLLSSVYGITPTLEHYACMVDILA 712
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
+AG+L EA I ++P+ PD+ +W +LG C HGN+E + AA++L E +P++ + ++
Sbjct: 713 KAGKLAEAESLINEMPLTPDASLWKTILGACRMHGNIEIAERAAEKLFESQPDDISSCIL 772
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASD 587
L+N++A RW+D+A+ R + DR + K PGCSWIE ++H F + D
Sbjct: 773 LSNIYADLKRWNDVAKLRSMLVDRGVKKEPGCSWIEINGKLHVFLSQD 820
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 134/583 (22%), Positives = 233/583 (39%), Gaps = 109/583 (18%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG L DA+ VF MP RD V+W ++V+A A G AL MS
Sbjct: 104 MYCKCGRLADARSVFDGMPHRDVVAWTAMVSAITAAGDAGAALRLFAEMSE--------- 154
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
EG+ PN L++ L AC L + H
Sbjct: 155 ---------------------------EGVVPNGFALAAALKACTVGSDLGFTPQVHAQA 187
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ + +P+V + LV+ Y CG++ A + ++++VS N ++ Y +G+ A+
Sbjct: 188 VKLEGLFDPYVSSSLVEAYVSCGEVDVAERALLDSPVRSDVSWNALLNEYARDGDYAKVM 247
Query: 181 ELFDQMEHLG-------------------------------VQRGI----ISWNSMISGY 205
+FD++ G ++RG+ + N +I Y
Sbjct: 248 LVFDKLVESGDEISKYTLPTVLKCCMELGLAKSGQAVHGLVIKRGLETDRVLNNCLIEMY 307
Query: 206 VDNSLYDEAFSMFR---------------------------DLLMR---DGIEPTSFTFG 235
++A+ +F D+ M+ G++P +TF
Sbjct: 308 SKCLSAEDAYEVFARIDEPDVVHCSLMISCFDRHDMAPEAFDIFMQMSDMGVKPNQYTFV 367
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
+ I + + + IHA + G V A+V MY + + A +AFD ++
Sbjct: 368 GLAIVASRTGDVNLCRSIHAHIVKSGFSRTKGVCDAIVGMYVKTGAVQDAILAFDLMQGP 427
Query: 296 ENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVH 355
+ GF + +++F E++ + + YT IL C+SL + G QVH
Sbjct: 428 DIASWNTLLSGFYSGNNCEHGLRIFKELICEGVLANKYTYVGILRCCTSLMDLRFGCQVH 487
Query: 356 AYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGK 415
A ++ G+ D + L+DMY + G +ARL + R+ D+ S +++ YA G+
Sbjct: 488 ACVLKSGFQGDYDVSKMLLDMYVQAGCFTNARLVFDRLKERDVFSWTVVMSTYAKTDEGE 547
Query: 416 EGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKH---YT 472
+ I FR +L RP+ + ++LS C + +G + Y +K +
Sbjct: 548 KAIECFRSMLRENKRPNDATLATSLSVCSDLACLGSGLQLHS----YTIKSGWNSSVVSS 603
Query: 473 CMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
+VD+ + G L +A E + D V W ++ G HG+
Sbjct: 604 ALVDMYVKCGNLADA-EMLFDESDTHDLVEWNTIICGYAQHGH 645
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 115/483 (23%), Positives = 198/483 (40%), Gaps = 83/483 (17%)
Query: 83 FRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRC 142
R++AE L R+ ++ L CA + L GK H + R+G + F+ + L+++Y +C
Sbjct: 53 LRLRAEEL----RSYAAALQGCAASRALRRGKALHARLLRSGPRPDAFLHDSLLNMYCKC 108
Query: 143 GDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMI 202
G +A+AR +FD M H R +++W +M+
Sbjct: 109 -------------------------------GRLADARSVFDGMPH----RDVVAWTAMV 133
Query: 203 SGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGL 262
S A +F + + +G+ P F + L AC + L ++HA A+ L
Sbjct: 134 SAITAAGDAGAALRLFAE-MSEEGVVPNGFALAAALKACTVGSDLGFTPQVHAQAVKLEG 192
Query: 263 QSDTFVGGALVEMYCRYQDLVAAQMAFDEIE-----NIENLLGKMKEDGFEPNVYTWNAM 317
D +V +LVE Y ++ A+ A + + LL + DG V M
Sbjct: 193 LFDPYVSSSLVEAYVSCGEVDVAERALLDSPVRSDVSWNALLNEYARDGDYAKV-----M 247
Query: 318 QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMY 377
+F +++ YT+ +L C L + G+ VH I+ G ++D + L++MY
Sbjct: 248 LVFDKLVESGDEISKYTLPTVLKCCMELGLAKSGQAVHGLVIKRGLETDRVLNNCLIEMY 307
Query: 378 AKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFL 437
+KC S + A + RI PD+V + M++ + H E F ++ G +P+ +F+
Sbjct: 308 SKCLSAEDAYEVFARIDEPDVVHCSLMISCFDRHDMAPEAFDIFMQMSDMGVKPNQYTFV 367
Query: 438 SA-----------LSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGE 486
L +HA +K+G F D +V + + G + +
Sbjct: 368 GLAIVASRTGDVNLCRSIHAHIVKSG--FSRTKGVCDA---------IVGMYVKTGAVQD 416
Query: 487 AYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFG-QIAADRLIELEPNNTGNYVMLANLFA 545
A + PD W LL G S N E G +I + + E +LAN +
Sbjct: 417 AI-LAFDLMQGPDIASWNTLLSGFYSGNNCEHGLRIFKELICE---------GVLANKYT 466
Query: 546 YAG 548
Y G
Sbjct: 467 YVG 469
>gi|242082435|ref|XP_002445986.1| hypothetical protein SORBIDRAFT_07g029130 [Sorghum bicolor]
gi|241942336|gb|EES15481.1| hypothetical protein SORBIDRAFT_07g029130 [Sorghum bicolor]
Length = 567
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 188/597 (31%), Positives = 301/597 (50%), Gaps = 86/597 (14%)
Query: 3 GKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSW 62
+ G + A++VF MP RD VSWN+++TA G L R+ + ++VSW
Sbjct: 26 ARAGDVAAARRVFDAMPHRDVVSWNALLTALWRAGR--HHLPAARRLFDEAMPSRDVVSW 83
Query: 63 SAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITR 122
+++I G +G D +A F A + N T +++L RL
Sbjct: 84 NSIIAGCLAHG-DLDAASAYF---AGAPKRNVATWNAMLAGLLRL--------------- 124
Query: 123 NGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAREL 182
G A ++F + +N VS T++ G G VA ARE+
Sbjct: 125 --------------------GRADDADRLFGEMPKRNVVSYTTMVDGLARRGEVARAREV 164
Query: 183 FDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACA 242
FD M R ++SW +MISGYV+N ++ EA +F + ++ ++AC
Sbjct: 165 FDAMP----DRNLVSWAAMISGYVENGMFVEATKLFEAMPEKN------------VVACT 208
Query: 243 DMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKM 302
A++ YC+ D+ +A+ FD I + +
Sbjct: 209 ----------------------------AMITSYCKQGDVESARRLFDGIRAKDVISWNT 240
Query: 303 KEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCG 362
G+ N + AM+L + M + PD T+ +L+ACS+LA + +GK HA AI+
Sbjct: 241 MIAGYVHNGHGEEAMRLHAVMFREGVKPDHATLIAVLTACSALALLRQGKSTHAIAIKAM 300
Query: 363 YDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFR 422
+S + AL+ MY+KCG++ + L + + T D+VS N ++ AYA HG ++ IA F
Sbjct: 301 LESGISFSNALMTMYSKCGNVGESELVFINLRTKDIVSWNTIIAAYAQHGKYQKVIALFH 360
Query: 423 RILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLLSRA 481
+ +G PD I+FLS LSAC H G + + FDLM+ Y + P +HY C+VD+LSRA
Sbjct: 361 EMEMTGLIPDDITFLSVLSACGHVGKVDASLKLFDLMSSKYAISPRAEHYACIVDILSRA 420
Query: 482 GELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLA 541
G+L +A +IK +P+ + +WG+LLG C HGN++ G++AA L++ + ++G YV+L+
Sbjct: 421 GQLEKASSYIKDMPLEAEKNVWGSLLGACQMHGNVQLGELAAKMLVQSDSESSGPYVILS 480
Query: 542 NLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYT 598
N++A AG W + + R +MK+R + K PG SW E +E+H F D SH +I +
Sbjct: 481 NIYAAAGMWGQVNQVRGQMKERGVKKQPGYSWTEIANEVHMFVGGDASHPEMRKIIS 537
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 77/372 (20%), Positives = 146/372 (39%), Gaps = 55/372 (14%)
Query: 164 NTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGY---------VDNSLYDEA 214
N I G+VA AR +FD M H R ++SWN++++ L+DEA
Sbjct: 19 NQRISALARAGDVAAARRVFDAMPH----RDVVSWNALLTALWRAGRHHLPAARRLFDEA 74
Query: 215 FSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVE 274
RD++ ++ S++ C L + + GA
Sbjct: 75 MPS-RDVV----------SWNSIIAGCLAHGDLDA--------------ASAYFAGAPKR 109
Query: 275 MYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAM--------QLFSEMLSL 326
+ ++A + ++ + L G+M + NV ++ M ++
Sbjct: 110 NVATWNAMLAGLLRLGRADDADRLFGEMPKR----NVVSYTTMVDGLARRGEVARAREVF 165
Query: 327 DLTPDIYTVGIILSACSSLATMERGKQVHAYAI-RCGYDSDVHIGTALVDMYAKCGSLKH 385
D PD ++ A +E G V A + + +V TA++ Y K G ++
Sbjct: 166 DAMPD---RNLVSWAAMISGYVENGMFVEATKLFEAMPEKNVVACTAMITSYCKQGDVES 222
Query: 386 ARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVH 445
AR + I D++S N M+ Y +GHG+E + + G +PDH + ++ L+AC
Sbjct: 223 ARRLFDGIRAKDVISWNTMIAGYVHNGHGEEAMRLHAVMFREGVKPDHATLIAVLTACSA 282
Query: 446 AGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGA 505
++ G + ++ + ++ + S+ G +GE+ E + D V W
Sbjct: 283 LALLRQGKSTHAIAIKAMLESGISFSNALMTMYSKCGNVGES-ELVFINLRTKDIVSWNT 341
Query: 506 LLGGCVSHGNLE 517
++ HG +
Sbjct: 342 IIAAYAQHGKYQ 353
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 74/184 (40%), Gaps = 50/184 (27%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG++ +++ VF + +D VSWN+++ A
Sbjct: 314 MYSKCGNVGESELVFINLRTKDIVSWNTIIAA---------------------------- 345
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+ Q+G ++ I + M+ GL P+ T SVL AC + K+ +
Sbjct: 346 --------YAQHGKYQKVIALFHEMEMTGLIPDDITFLSVLSACGHVGKVDASLKLF--- 394
Query: 121 TRNGFMSNPFVVNG-------LVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCE- 172
MS+ + ++ +VD+ R G + A ++ E + ++G C+
Sbjct: 395 ---DLMSSKYAISPRAEHYACIVDILSRAGQLEKASSYIKDMPLEAEKNVWGSLLGACQM 451
Query: 173 NGNV 176
+GNV
Sbjct: 452 HGNV 455
>gi|224140095|ref|XP_002323422.1| predicted protein [Populus trichocarpa]
gi|222868052|gb|EEF05183.1| predicted protein [Populus trichocarpa]
Length = 574
Score = 311 bits (796), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 168/469 (35%), Positives = 266/469 (56%), Gaps = 18/469 (3%)
Query: 141 RCGDMLSALKIFSKFS----IKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGII 196
+C ++ ++ ++ + I + + N ++ ++ ++ A LF++ME +R +
Sbjct: 12 KCRNIFQIKQVHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLLFNKME----ERDPV 67
Query: 197 SWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHAL 256
SW+ MI G+V N Y+ F FR+L+ R G +P +F+ V+ AC D L G+ IH+
Sbjct: 68 SWSVMIGGFVKNGDYERCFQTFRELI-RAGSKPDNFSLPFVIKACRDTMGLIMGRLIHST 126
Query: 257 AIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGF----EPNVY 312
+ GL D FV LV+MY + + A+ FD + + + + G+ +PN
Sbjct: 127 VLKNGLHLDNFVCSTLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAECGKPN-E 185
Query: 313 TWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTA 372
+W LF +M PD + I++AC+ L M + + VH Y Y DV +GTA
Sbjct: 186 SW---VLFDQMRRDGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVELGTA 242
Query: 373 LVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPD 432
++DMYAKCGS+ +R + R+ +++S +AM+ AY HG G+E + F +L SG P+
Sbjct: 243 MIDMYAKCGSIDSSREIFDRMEQKNVISWSAMIGAYGYHGQGREALELFHMMLNSGIIPN 302
Query: 433 HISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFI 491
I+F+S L AC HAG + G + F LM+ Y V+P +KHYTCMVDLL RAG L +A I
Sbjct: 303 RITFISLLYACSHAGLVDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQALRLI 362
Query: 492 KKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWS 551
+ + + D +W A LG C H ++ + AA L+ L+ N G+Y++L+N++A AGRW
Sbjct: 363 ENMEVEKDEGIWCAFLGACRIHRQVDLAEKAAKLLLSLQTQNPGHYILLSNIYANAGRWK 422
Query: 552 DLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTII 600
D+A+ R M RR+ K PG +WIE + I++F A D SH RS EIY ++
Sbjct: 423 DVAKIRNLMAKRRLKKIPGYTWIEVDNIIYRFGAGDNSHLRSNEIYEML 471
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/402 (24%), Positives = 170/402 (42%), Gaps = 74/402 (18%)
Query: 4 KCGSLDDAKKVFKMMPE----RDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNL 59
KC ++ K+V + D + N ++ CA + ++ A +M D
Sbjct: 12 KCRNIFQIKQVHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLLFNKMEERDP----- 66
Query: 60 VSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
VSWS +IGGF +NG E + G +P+ +L V+ AC L +G+ H
Sbjct: 67 VSWSVMIGGFVKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMGRLIHST 126
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ +NG + FV + LVD+Y +CG + +A ++F + K+ V+ +I GY E G E+
Sbjct: 127 VLKNGLHLDNFVCSTLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAECGKPNES 186
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
LFDQM RDG P +++
Sbjct: 187 WVLFDQMR------------------------------------RDGFVPDKVAMVTIVN 210
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
ACA + ++ K + +H A D +G A+++MY + + +++ FD +E
Sbjct: 211 ACAKLGAMNKARLVHDYVCARRYSLDVELGTAMIDMYAKCGSIDSSREIFDRME------ 264
Query: 300 GKMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSSL 345
+ NV +W+AM +LF ML+ + P+ T +L ACS
Sbjct: 265 --------QKNVISWSAMIGAYGYHGQGREALELFHMMLNSGIIPNRITFISLLYACSHA 316
Query: 346 ATMERGKQVHAY-AIRCGYDSDVHIGTALVDMYAKCGSLKHA 386
++ G Q+ + ++ G DV T +VD+ + G L A
Sbjct: 317 GLVDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQA 358
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 135/282 (47%), Gaps = 4/282 (1%)
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
F S L C ++ + K++HA G+ D V L+ M +++DLV A + F+++E
Sbjct: 6 FISTLFKCRNIFQI---KQVHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLLFNKME 62
Query: 294 NIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ 353
+ + + GF N Q F E++ PD +++ ++ AC + G+
Sbjct: 63 ERDPVSWSVMIGGFVKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMGRL 122
Query: 354 VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGH 413
+H+ ++ G D + + LVDMYAKCG + +A+ + R+ DLV++ M+ YA G
Sbjct: 123 IHSTVLKNGLHLDNFVCSTLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAECGK 182
Query: 414 GKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTC 473
E F ++ GF PD ++ ++ ++AC G++ D + ++ T
Sbjct: 183 PNESWVLFDQMRRDGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVELGTA 242
Query: 474 MVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
M+D+ ++ G + + E ++ + + W A++G HG
Sbjct: 243 MIDMYAKCGSIDSSREIFDRMEQ-KNVISWSAMIGAYGYHGQ 283
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 106/229 (46%), Gaps = 36/229 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG +D+AK++F MP++D LV
Sbjct: 145 MYAKCGMIDNAKQLFDRMPKKD------------------------------------LV 168
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+ + +I G+ + G E+ + +M+ +G P+ + +++ ACA+L ++ + H Y+
Sbjct: 169 TRTVMIAGYAECGKPNESWVLFDQMRRDGFVPDKVAMVTIVNACAKLGAMNKARLVHDYV 228
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ + + ++D+Y +CG + S+ +IF + KN +S + +I Y +G EA
Sbjct: 229 CARRYSLDVELGTAMIDMYAKCGSIDSSREIFDRMEQKNVISWSAMIGAYGYHGQGREAL 288
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEP 229
ELF M + G+ I++ S++ L D+ +F + + G+ P
Sbjct: 289 ELFHMMLNSGIIPNRITFISLLYACSHAGLVDDGLQLFSLMSVSYGVRP 337
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 59/111 (53%), Gaps = 2/111 (1%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGS+D ++++F M +++ +SW++++ A +G EALE M + PN +
Sbjct: 246 MYAKCGSIDSSREIFDRMEQKNVISWSAMIGAYGYHGQGREALELFHMMLN-SGIIPNRI 304
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKL 110
++ +++ + G ++ + + M G+ P+ + + ++ R +L
Sbjct: 305 TFISLLYACSHAGLVDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRL 355
>gi|413935694|gb|AFW70245.1| hypothetical protein ZEAMMB73_875976 [Zea mays]
Length = 807
Score = 311 bits (796), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 176/627 (28%), Positives = 307/627 (48%), Gaps = 77/627 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGS+ DA ++F MP +PN V
Sbjct: 186 MYTKCGSVADAVRLFDGMP------------------------------------SPNEV 209
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARL--------QKLSL 112
S++A++GG Q G ++A+ + RM G+ + +SSVL ACA+ + + L
Sbjct: 210 SFTAMMGGLAQGGAVDDALRLFARMSRTGIRVDPVAVSSVLGACAQACAGDYNVARAIQL 269
Query: 113 GKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCE 172
+ H + R GF S+ V N LVD+Y + M A+K+F S + VS N +I GY +
Sbjct: 270 AQSIHALVVRKGFGSDQHVGNSLVDLYAKGMKMDEAIKVFESLSSVSIVSWNILITGYGQ 329
Query: 173 NGNVAEARELFDQMEHLGVQRG-------------------------------IISWNSM 201
G A E+ + M+ G + + +WN++
Sbjct: 330 LGCYERAMEVLEFMQESGFEPNEVTYSNMLASCIKARDVPSARAMFDKIPKPSVTTWNTL 389
Query: 202 ISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALG 261
+SGY L+ E +FR + ++ ++P T +L +C+ + + GK++H+ ++ L
Sbjct: 390 LSGYGQEELHQETIDLFRRMQHQN-VQPDRTTLAVILSSCSRLGNFELGKQVHSASVRLL 448
Query: 262 LQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFS 321
L +D FV L+++Y + + A + F+ + + + G + + A
Sbjct: 449 LHNDMFVASGLIDIYSKCGQVGIALIIFNMMTERDVVCWNSMISGLAIHSLSEEAFDFLK 508
Query: 322 EMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCG 381
+M + P + +++ C+ L+++ +G+Q+HA ++ GYD +V++G +L+DMYAK G
Sbjct: 509 QMRENGMFPTESSYASMINLCARLSSIPQGRQMHAQVLKDGYDQNVYVGCSLIDMYAKSG 568
Query: 382 SLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALS 441
++ ARL + + +LV+ N M+ YA +G G++ + F +L + +PD ++F++ L+
Sbjct: 569 NMDDARLFFNCMIVKNLVAWNEMIHGYAQNGFGEKAVELFEYMLTTKQKPDSVTFIAVLT 628
Query: 442 ACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDS 500
C H+G + FF+ M + Y + P ++HYTC++D L+RA E I K+P D
Sbjct: 629 GCSHSGLVDEAVTFFNSMESNYGITPLVEHYTCLIDALARAARFAEVEAVIGKMPYKDDP 688
Query: 501 VMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKM 560
++W LL CV H N E G+ +A L L+P N YV+L+N++A GR D + R M
Sbjct: 689 ILWEVLLAACVVHHNAELGEFSAKHLFRLDPKNPSPYVLLSNIYATLGRHGDASAVRALM 748
Query: 561 KDRRMHKSPGCSWIEDRDEIHKFRASD 587
R + K G SW+ +D F +D
Sbjct: 749 SSRGVVKGRGYSWVNHKDGSRAFMVAD 775
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 151/598 (25%), Positives = 256/598 (42%), Gaps = 119/598 (19%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y G A + F+ +P + S+N+ ++A G + A + L RM N V
Sbjct: 54 LYSLSGLPCHALRAFRALPHPNVYSYNAAISAACRAGDLAAARDLLGRMPD-----RNAV 108
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ VI ++G EA+ M M EGL P TL+SVL AC + L G+ HG
Sbjct: 109 SWNTVIAAVARSGSPGEALEMYQGMLQEGLAPTNFTLASVLSACGAVAALDDGRRCHGLA 168
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G + FV NGL+ +Y +CG + A+++F NEVS ++ G + G V +A
Sbjct: 169 VKVGLDGHQFVENGLLGMYTKCGSVADAVRLFDGMPSPNEVSFTAMMGGLAQGGAVDDAL 228
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LF +M G++ ++P + + SVL A
Sbjct: 229 RLFARMSRTGIR----------------------------------VDPVAVS--SVLGA 252
Query: 241 CA-----DMNSLRK---GKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI 292
CA D N R + IHAL + G SD VG +LV++Y + + A F+ +
Sbjct: 253 CAQACAGDYNVARAIQLAQSIHALVVRKGFGSDQHVGNSLVDLYAKGMKMDEAIKVFESL 312
Query: 293 ENIE---------------------NLLGKMKEDGFEPN--------------------- 310
++ +L M+E GFEPN
Sbjct: 313 SSVSIVSWNILITGYGQLGCYERAMEVLEFMQESGFEPNEVTYSNMLASCIKARDVPSAR 372
Query: 311 ----------VYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSSLA 346
V TWN + LF M ++ PD T+ +ILS+CS L
Sbjct: 373 AMFDKIPKPSVTTWNTLLSGYGQEELHQETIDLFRRMQHQNVQPDRTTLAVILSSCSRLG 432
Query: 347 TMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLT 406
E GKQVH+ ++R +D+ + + L+D+Y+KCG + A + + ++ D+V N+M++
Sbjct: 433 NFELGKQVHSASVRLLLHNDMFVASGLIDIYSKCGQVGIALIIFNMMTERDVVCWNSMIS 492
Query: 407 AYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKP 466
A+H +E +++ +G P S+ S ++ C SI G + +
Sbjct: 493 GLAIHSLSEEAFDFLKQMRENGMFPTESSYASMINLCARLSSIPQGRQMHAQVLKDGYDQ 552
Query: 467 SLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAAD 524
++ ++D+ +++G + +A F + + + V W ++ G +G FG+ A +
Sbjct: 553 NVYVGCSLIDMYAKSGNMDDARLFFNCM-IVKNLVAWNEMIHGYAQNG---FGEKAVE 606
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 141/342 (41%), Gaps = 50/342 (14%)
Query: 246 SLRKGKEIHALAIALGLQSDTFVGGALVEMYC---------------------RYQDLVA 284
S K HA +A GL +DTF+ LVE+Y Y ++
Sbjct: 25 SRSNAKAAHARVLAAGLAADTFLLNRLVELYSLSGLPCHALRAFRALPHPNVYSYNAAIS 84
Query: 285 AQMAFDEIENIENLLGKMKEDGFEPNVYTWN--------------AMQLFSEMLSLDLTP 330
A ++ +LLG+M + N +WN A++++ ML L P
Sbjct: 85 AACRAGDLAAARDLLGRMPDR----NAVSWNTVIAAVARSGSPGEALEMYQGMLQEGLAP 140
Query: 331 DIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAY 390
+T+ +LSAC ++A ++ G++ H A++ G D + L+ MY KCGS+ A +
Sbjct: 141 TNFTLASVLSACGAVAALDDGRRCHGLAVKVGLDGHQFVENGLLGMYTKCGSVADAVRLF 200
Query: 391 KRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVH----- 445
+ +P+ VS AM+ A G + + F R+ +G R D ++ S L AC
Sbjct: 201 DGMPSPNEVSFTAMMGGLAQGGAVDDALRLFARMSRTGIRVDPVAVSSVLGACAQACAGD 260
Query: 446 ---AGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVM 502
A +I+ L+ +VDL ++ ++ EA + + + + V
Sbjct: 261 YNVARAIQLAQSIHALVVRKGFGSDQHVGNSLVDLYAKGMKMDEAIKVFESLS-SVSIVS 319
Query: 503 WGALLGGCVSHGNLEFGQIAADRLIE--LEPNNTGNYVMLAN 542
W L+ G G E + + E EPN MLA+
Sbjct: 320 WNILITGYGQLGCYERAMEVLEFMQESGFEPNEVTYSNMLAS 361
>gi|225457865|ref|XP_002279206.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26540
[Vitis vinifera]
Length = 711
Score = 311 bits (796), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 193/612 (31%), Positives = 309/612 (50%), Gaps = 85/612 (13%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWN---------------------------------- 27
YGKC LDDA+++F+ MP+RD SWN
Sbjct: 105 YGKCSCLDDARELFEEMPQRDGGSWNAMITAYAQGGCAEKALWLFSRMNRLGIWANEITF 164
Query: 28 -SVVTACAA----------NGLVLEALECLERM--SSL------------------DNET 56
SV+ +CA +GL+++ C + SSL + E
Sbjct: 165 ASVLGSCATVLALFLSKQIHGLIVKYGFCWNVILGSSLVDIYGKCRVMSDARRMFDEIEN 224
Query: 57 PNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEF 116
PN +SW+ ++ + + G ++EA+ M F+M + P T S+ L AC+ + L G +
Sbjct: 225 PNAISWNVIVRRYLEMGNEKEAVVMFFKMIRANIRPLNFTFSNALIACSSISALQEGIQI 284
Query: 117 HGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNV 176
HG R G+ + V + L+D+Y +CGD+ SA +IF S KN +S +I+ GY +G
Sbjct: 285 HGVAIRIGYDEDEVVSSSLIDMYAKCGDLESACRIFELPSSKNLISWTSIVSGYAMSGQT 344
Query: 177 AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTS-FTFG 235
EAR LFD+M +R +ISWN+M++GY ++EA LMR + T G
Sbjct: 345 REARVLFDEMP----ERSVISWNAMLAGYTHFCQWEEALEFV--FLMRKATQDIDHVTVG 398
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
+L CA ++ + GK++H GL S+ FVG AL+ MY + +L + ++ F ++ +
Sbjct: 399 LILNVCAGLSDVESGKQVHGFIYRHGLYSNLFVGNALLHMYGKCGNLRSTRLWFYQMSHW 458
Query: 296 EN------LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATME 349
+ LL G AM +F EM + TP +T+G +LSAC+++ +E
Sbjct: 459 RDRISWNALLTSHARHGLSEE-----AMTIFGEM-QWETTPSKFTLGTLLSACANIFALE 512
Query: 350 RGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYA 409
+GKQ+H + IR GY+ DV ALVDMY+KC L++A +K + DL+ N+M+
Sbjct: 513 QGKQIHGFMIRNGYEIDVVARGALVDMYSKCRCLEYALKVFKEAPSRDLILWNSMILGCC 572
Query: 410 MHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSL 468
+G G++ + F + G +PDHI+F L C+ G G+E+F+ M+ Y + P L
Sbjct: 573 HNGRGRDVLGLFGLMEEEGVKPDHITFQGILLGCICEGLAGLGTEYFNSMSNKYCIIPRL 632
Query: 469 KHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIE 528
+HY M++L R G + E +FIK++P P M + C HG+ G+ AA++L E
Sbjct: 633 EHYESMIELYGRHGFMDELEDFIKRMPFEPTVAMLTRVFNACSEHGHSRLGKWAAEQLNE 692
Query: 529 LEPNNTGNYVML 540
L P+ ++ +L
Sbjct: 693 LNPSTPFHFQIL 704
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 116/423 (27%), Positives = 195/423 (46%), Gaps = 51/423 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG L+ A ++F++ ++ +SW S+V+ A +G EA + M +++
Sbjct: 306 MYAKCGDLESACRIFELPSSKNLISWTSIVSGYAMSGQTREARVLFDEMPE-----RSVI 360
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A++ G+T EEA+ +F M+ + + T+ +L CA L + GK+ HG+I
Sbjct: 361 SWNAMLAGYTHFCQWEEALEFVFLMRKATQDIDHVTVGLILNVCAGLSDVESGKQVHGFI 420
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R+G SN FV N L+ +Y +CG++ S R
Sbjct: 421 YRHGLYSNLFVGNALLHMYGKCGNLRS-------------------------------TR 449
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
F QM H R ISWN++++ + + L +EA ++F + M+ P+ FT G++L A
Sbjct: 450 LWFYQMSHW---RDRISWNALLTSHARHGLSEEAMTIFGE--MQWETTPSKFTLGTLLSA 504
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA++ +L +GK+IH I G + D GALV+MY + + L A F E + + +L
Sbjct: 505 CANIFALEQGKQIHGFMIRNGYEIDVVARGALVDMYSKCRCLEYALKVFKEAPSRDLILW 564
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSAC-----SSLATMERGKQVH 355
G N + + LF M + PD T IL C + L T +
Sbjct: 565 NSMILGCCHNGRGRDVLGLFGLMEEEGVKPDHITFQGILLGCICEGLAGLGTEYFNSMSN 624
Query: 356 AYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNAMLTAYAMHGHG 414
Y I + +++++Y + G + KR+ P + + A + HGH
Sbjct: 625 KYCI----IPRLEHYESMIELYGRHGFMDELEDFIKRMPFEPTVAMLTRVFNACSEHGHS 680
Query: 415 KEG 417
+ G
Sbjct: 681 RLG 683
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 79/178 (44%), Gaps = 1/178 (0%)
Query: 338 ILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPD 397
+ CSS + ++V ++ I + + ++ Y KC L AR ++ + D
Sbjct: 66 LFQICSSNLAIVEARKVESHLITFSPAPPIFLLNRAIETYGKCSCLDDARELFEEMPQRD 125
Query: 398 LVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFD 457
S NAM+TAYA G ++ + F R+ G + I+F S L +C ++ +
Sbjct: 126 GGSWNAMITAYAQGGCAEKALWLFSRMNRLGIWANEITFASVLGSCATVLALFLSKQIHG 185
Query: 458 LMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
L+ Y ++ + +VD+ + + +A +I P+++ W ++ + GN
Sbjct: 186 LIVKYGFCWNVILGSSLVDIYGKCRVMSDARRMFDEIE-NPNAISWNVIVRRYLEMGN 242
>gi|115466810|ref|NP_001057004.1| Os06g0185700 [Oryza sativa Japonica Group]
gi|55773755|dbj|BAD72438.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595044|dbj|BAF18918.1| Os06g0185700 [Oryza sativa Japonica Group]
gi|125596287|gb|EAZ36067.1| hypothetical protein OsJ_20377 [Oryza sativa Japonica Group]
Length = 673
Score = 311 bits (796), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 181/573 (31%), Positives = 281/573 (49%), Gaps = 73/573 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G L++A+KVF +PER N+V
Sbjct: 166 MYAKAGDLENARKVFDRVPER------------------------------------NVV 189
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW++++ G QNG EE + + M+ + + P+ T+ SVL ACA L L G+ HG +
Sbjct: 190 SWTSMLSGSIQNGIAEEGLVLFNEMRQDNVHPSEYTMVSVLAACAMLGGLHQGRWIHGSV 249
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G +N F+ L+D+Y +C V +AR
Sbjct: 250 IKYGLSTNSFISASLLDMYAKCE-------------------------------KVEDAR 278
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+FD++E + I+ W +MI GY N +A +F I P S T +V+ A
Sbjct: 279 RVFDELEFVD----IVLWTAMIVGYTQNKRPLDALQLFLHKKFVS-IVPNSVTIATVISA 333
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
A + L G+ +HA+ + LG V ALV+MY + Q L A F I + +
Sbjct: 334 SAQLRHLPLGRSVHAIGVKLGTMESDVVRNALVDMYAKCQALPEANSIFGRILIKDVVAW 393
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G+ N ++ LF+ M ++PD +V LSAC LA + GK H YAI+
Sbjct: 394 NSMMAGYSENGMANESLVLFNRMRMQGISPDAISVVNALSACVCLADLHIGKGFHTYAIK 453
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
+ S++++ TAL+++Y+KC L A+ + ++ + V+ +AM+ Y M G I
Sbjct: 454 YAFMSNIYVNTALLNLYSKCADLPSAQRVFNDMTDRNSVTWSAMIGGYGMQGDSAGSIDL 513
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLLS 479
F +L P+ + F S LSAC H G + G E+FD MA ++++ PS+KHY CMVD+++
Sbjct: 514 FNEMLKENIHPNEVVFTSILSACSHTGMVTAGKEYFDSMARHFNITPSMKHYACMVDVMA 573
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
RAG L EA EFI+ +P+ +WG+ L GC H LEFG+ A ++ L P YV+
Sbjct: 574 RAGNLEEALEFIQNMPIKAGISVWGSFLHGCKLHSRLEFGEEAIKKMAALHPETPDFYVL 633
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCS 572
++NL+ GRW R+ M+++ + K PGCS
Sbjct: 634 MSNLYTSYGRWDKSQTIRRWMQEQGLVKLPGCS 666
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 131/456 (28%), Positives = 225/456 (49%), Gaps = 42/456 (9%)
Query: 57 PNLVSWSAVIGGFTQNGYDEEAIGML--FRMQAEGLEPNARTLSSVLPACARLQKLSLGK 114
P+ ++ ++G G +A+ + R + LS L AC R G+
Sbjct: 84 PDAYAYRVMLGWLVDAGSHADAVALHRDMRRRCPAAAQADVVLSLALKACVRSADFRYGR 143
Query: 115 EFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
H + + G ++ FV+N LVD+Y + GD+ EN
Sbjct: 144 RLHCDVVKAGG-ADGFVMNSLVDMYAKAGDL--------------------------EN- 175
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTF 234
AR++FD++ +R ++SW SM+SG + N + +E +F ++ +D + P+ +T
Sbjct: 176 ----ARKVFDRVP----ERNVVSWTSMLSGSIQNGIAEEGLVLFNEM-RQDNVHPSEYTM 226
Query: 235 GSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIEN 294
SVL ACA + L +G+ IH I GL +++F+ +L++MY + + + A+ FDE+E
Sbjct: 227 VSVLAACAMLGGLHQGRWIHGSVIKYGLSTNSFISASLLDMYAKCEKVEDARRVFDELEF 286
Query: 295 IENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV 354
++ +L G+ N +A+QLF + + P+ T+ ++SA + L + G+ V
Sbjct: 287 VDIVLWTAMIVGYTQNKRPLDALQLFLHKKFVSIVPNSVTIATVISASAQLRHLPLGRSV 346
Query: 355 HAYAIRCG-YDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGH 413
HA ++ G +SDV + ALVDMYAKC +L A + RI D+V+ N+M+ Y+ +G
Sbjct: 347 HAIGVKLGTMESDV-VRNALVDMYAKCQALPEANSIFGRILIKDVVAWNSMMAGYSENGM 405
Query: 414 GKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTC 473
E + F R+ G PD IS ++ALSACV + G F Y ++ T
Sbjct: 406 ANESLVLFNRMRMQGISPDAISVVNALSACVCLADLHIGKGFHTYAIKYAFMSNIYVNTA 465
Query: 474 MVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
+++L S+ +L A + +SV W A++GG
Sbjct: 466 LLNLYSKCADLPSAQRVFNDM-TDRNSVTWSAMIGG 500
>gi|52076596|dbj|BAD45498.1| hypothetical protein [Oryza sativa Japonica Group]
gi|218187337|gb|EEC69764.1| hypothetical protein OsI_00012 [Oryza sativa Indica Group]
Length = 810
Score = 311 bits (796), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 185/576 (32%), Positives = 295/576 (51%), Gaps = 42/576 (7%)
Query: 27 NSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQ 86
N+++ A +GL+ A R L+ + V+++A++ G ++ G +A+ + M+
Sbjct: 174 NTLLDAYCKHGLLAAA-----RRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMR 228
Query: 87 AEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDML 146
G+ T SS+L A + L LG + H + R+ + N FV N L+D Y +C +
Sbjct: 229 RAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLD 288
Query: 147 SALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYV 206
++F + ++ VS N II Y N A LF +M+ LG R ++ + +M+S V
Sbjct: 289 DMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLS--V 346
Query: 207 DNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDT 266
SL D + GK+IHA + LGL S+
Sbjct: 347 AGSLPD----------------------------------VHIGKQIHAQLVLLGLASED 372
Query: 267 FVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSL 326
+G AL++MY + L AA+ F + G+ N A+QLFS+M
Sbjct: 373 LLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRA 432
Query: 327 DLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHA 386
L PD T I+ A SSLA + G+Q+H+Y IR GY S V G+ LVDMYAKCG L A
Sbjct: 433 GLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEA 492
Query: 387 RLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHA 446
+ + + +S NA+++AYA +G K I F +L GF PD ++FLS L+AC H
Sbjct: 493 LRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHN 552
Query: 447 GSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGA 505
G ++F LM + Y + P +HY C++D L R G + + + ++P D ++W +
Sbjct: 553 GLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTS 612
Query: 506 LLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRM 565
+L C HGN E ++AAD+L +EP + YV+L+N++A AG+W D A ++ M+DR +
Sbjct: 613 ILHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGV 672
Query: 566 HKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
K G SW+E + +I+ F ++D + +EI +D
Sbjct: 673 RKESGYSWVEIKQKIYSFASNDLTSPMIDEIKDELD 708
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 129/511 (25%), Positives = 227/511 (44%), Gaps = 51/511 (9%)
Query: 6 GSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAV 65
G L A+ +F MP ++ S N +++A +++G + A L + N +W+ +
Sbjct: 57 GHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLF-----LSSPHRNATTWTIM 111
Query: 66 IGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVL--PACARLQKLSLGKEFHGYITRN 123
+ G +A+ + M EG+ P+ T+++VL P C H + +
Sbjct: 112 MRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTV-------PSLHPFAIKF 164
Query: 124 GFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELF 183
G ++ FV CNT++ YC++G +A AR +F
Sbjct: 165 GLDTHVFV-------------------------------CNTLLDAYCKHGLLAAARRVF 193
Query: 184 DQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACAD 243
+M + +++N+M+ G L+ +A +F + R GI T FTF S+L A
Sbjct: 194 LEMH----DKDAVTYNAMMMGCSKEGLHTQALQLFA-AMRRAGIPATHFTFSSILTVAAG 248
Query: 244 MNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMK 303
M L G ++HAL + + FV +L++ Y + L + FDE+ +N+ +
Sbjct: 249 MAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVI 308
Query: 304 EDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGY 363
+ N ++LF EM L + +LS SL + GKQ+HA + G
Sbjct: 309 IAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGL 368
Query: 364 DSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRR 423
S+ +G AL+DMY+KCG L A+ + S +S A++T Y +G +E + F
Sbjct: 369 ASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSD 428
Query: 424 ILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGE 483
+ +G RPD +F S + A I G + + K S+ + +VD+ ++ G
Sbjct: 429 MRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGC 488
Query: 484 LGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
L EA ++P +S+ W A++ +G
Sbjct: 489 LDEALRTFDEMP-ERNSISWNAVISAYAHYG 518
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 136/342 (39%), Gaps = 72/342 (21%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y KC LDD +++F MPERD VS+N ++ A A N L M L
Sbjct: 281 YSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKL--------- 331
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
G+D + + P A LS L + +GK+ H +
Sbjct: 332 -----------GFDRQVL------------PYATMLS----VAGSLPDVHIGKQIHAQLV 364
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
G S + N L+D+Y +CG + +A FS S K+ +S +I GY +NG EA +
Sbjct: 365 LLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQ 424
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
LF M R G+ P TF S++ A
Sbjct: 425 LFSDMR------------------------------------RAGLRPDRATFSSIIKAS 448
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK 301
+ + + G+++H+ I G +S F G LV+MY + L A FDE+ ++
Sbjct: 449 SSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWN 508
Query: 302 MKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACS 343
+ NA+++F ML PD T +L+ACS
Sbjct: 509 AVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACS 550
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 133/299 (44%), Gaps = 45/299 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG LD AK F E+ +SW +++T N
Sbjct: 381 MYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQN------------------------ 416
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
G EEA+ + M+ GL P+ T SS++ A + L + LG++ H Y+
Sbjct: 417 ------------GQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYL 464
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R+G+ S+ F + LVD+Y +CG + AL+ F + +N +S N +I Y G A
Sbjct: 465 IRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAI 524
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
++F+ M H G +++ S+++ N L DE F + + I P + V+
Sbjct: 525 KMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDT 584
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRY---QDLVAAQMAFDEIENIE 296
+ ++ + + + ++D + +++ CR Q+L A++A D++ +E
Sbjct: 585 LGRVGCF---SQVQKMLVEMPFKADPIIWTSILH-SCRIHGNQEL--ARVAADKLFGME 637
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/373 (23%), Positives = 150/373 (40%), Gaps = 36/373 (9%)
Query: 173 NGNVAEARELFDQMEHLGV---------------------------QRGIISWNSMISGY 205
+G++ AR +FDQM H + R +W M+ +
Sbjct: 56 SGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAH 115
Query: 206 VDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL-IACADMNSLRKGKEIHALAIALGLQS 264
+A S+FR +L +G+ P T +VL + + SL H AI GL +
Sbjct: 116 AAAGRTSDALSLFRAML-GEGVIPDRVTVTTVLNLPGCTVPSL------HPFAIKFGLDT 168
Query: 265 DTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEML 324
FV L++ YC++ L AA+ F E+ + + + G A+QLF+ M
Sbjct: 169 HVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMR 228
Query: 325 SLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLK 384
+ +T IL+ + +A + G QVHA +R +V + +L+D Y+KC L
Sbjct: 229 RAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLD 288
Query: 385 HARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACV 444
R + + D VS N ++ AYA + + FR + GF + + + LS
Sbjct: 289 DMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAG 348
Query: 445 HAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWG 504
+ G + + + ++D+ S+ G L A ++ W
Sbjct: 349 SLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRS-EKSAISWT 407
Query: 505 ALLGGCVSHGNLE 517
AL+ G V +G E
Sbjct: 408 ALITGYVQNGQHE 420
>gi|147841045|emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]
Length = 1309
Score = 311 bits (796), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 169/479 (35%), Positives = 272/479 (56%), Gaps = 15/479 (3%)
Query: 128 NP-FVVNGLVDVYRRCGDMLSALKIFSKFSI----KNEVSCNTIIVGYCENGNVAEAREL 182
NP F ++ LV+ C ++ ++ ++ S+ +N V N +I Y + +A L
Sbjct: 61 NPKFYISALVN----CRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGL 116
Query: 183 FDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACA 242
FD M R +SW+ M+ G+ Y F FR+L+ R G P ++T V+ AC
Sbjct: 117 FDGM----CVRDSVSWSVMVGGFAKVGDYINCFGTFRELI-RCGARPDNYTLPFVIRACR 171
Query: 243 DMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKM 302
D+ +L+ G+ IH + GL D FV ALV+MY + +++ A+ FD+++ + + +
Sbjct: 172 DLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTV 231
Query: 303 KEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCG 362
G+ ++ LF +M + PD + ++ AC+ L M + + + Y R
Sbjct: 232 MIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKK 291
Query: 363 YDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFR 422
+ DV +GTA++DMYAKCG ++ AR + R+ +++S +AM+ AY HG G++ + F
Sbjct: 292 FQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFP 351
Query: 423 RILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRA 481
+L+SG PD I+ S L AC HAG ++ G FF M Y V+ +KHYTC+VDLL RA
Sbjct: 352 MMLSSGMLPDKITLASLLYACSHAGLVEEGLRFFSSMWEDYSVRTDVKHYTCVVDLLGRA 411
Query: 482 GELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLA 541
G L EA + IK + + D +WGA LG C +H ++ + AA L+EL+ N G+YV+L+
Sbjct: 412 GRLDEALKLIKSMTIEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQSQNPGHYVLLS 471
Query: 542 NLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTII 600
N++A AGRW D+A+ R M RR+ K+PG +WIE ++ H+F D +H RS+EIY ++
Sbjct: 472 NIYANAGRWEDVAKIRDLMSQRRLKKTPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEML 530
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 157/445 (35%), Positives = 253/445 (56%), Gaps = 6/445 (1%)
Query: 157 IKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFS 216
++N + N ++ Y + +A LFD M R +SW+ M+ G+ Y F
Sbjct: 767 LQNLIVANKLVXFYSYYRALDDAYGLFDGM----CVRDSVSWSVMVGGFAKVGDYMNCFG 822
Query: 217 MFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMY 276
FR+L+ R G P ++T V+ AC D+ +L+ G+ IH + GL D FV ALV+MY
Sbjct: 823 TFRELI-RCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMY 881
Query: 277 CRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVG 336
+ +++ A+ FD++ + + + G+ ++ LF +M + PD +
Sbjct: 882 GKCREIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMV 941
Query: 337 IILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTP 396
++ AC+ L M + + + Y R + DV +GTA++DM+AKCG ++ AR + R+
Sbjct: 942 TVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEK 1001
Query: 397 DLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFF 456
+++S +AM+ AY HG G++ + F +L SG P+ I+ +S L AC HAG ++ G FF
Sbjct: 1002 NVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFF 1061
Query: 457 DLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
M Y V+ +KHYTC+VDLL RAG L EA + I + D +WGA LG C +H +
Sbjct: 1062 SXMWEDYSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSMTXEKDEGLWGAFLGACRTHKD 1121
Query: 516 LEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIE 575
+ + AA L+EL+P N G+Y++L+N++A AGRW D+A+ R M RR+ K PG +WIE
Sbjct: 1122 VXLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKIRDLMSQRRLKKIPGWTWIE 1181
Query: 576 DRDEIHKFRASDRSHDRSEEIYTII 600
++ H+F D +H RS+EIY ++
Sbjct: 1182 VDNKSHQFSVGDTTHPRSKEIYEML 1206
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 144/346 (41%), Gaps = 73/346 (21%)
Query: 60 VSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
VSWS ++GGF + G G + G P+ TL V+ AC L+ L +G+ H
Sbjct: 126 VSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHI 185
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ + G + FV LVD+Y +C ++ A +F K ++ V+ +I GY E G E+
Sbjct: 186 VYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANES 245
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
LF++M +G+ P +V+
Sbjct: 246 LVLFEKMR------------------------------------EEGVVPDKVAMVTVVF 269
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
ACA + ++ K + I Q D +G A+++MY + + +A+ FD +E
Sbjct: 270 ACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRME------ 323
Query: 300 GKMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSSL 345
E NV +W+AM LF MLS + PD T+ +L ACS
Sbjct: 324 --------EKNVISWSAMIAAYGYHGQGRKALDLFPMMLSSGMLPDKITLASLLYACSHA 375
Query: 346 ATMERGKQVHA-----YAIRCGYDSDVHIGTALVDMYAKCGSLKHA 386
+E G + + Y++R +DV T +VD+ + G L A
Sbjct: 376 GLVEEGLRFFSSMWEDYSVR----TDVKHYTCVVDLLGRAGRLDEA 417
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 143/346 (41%), Gaps = 73/346 (21%)
Query: 60 VSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
VSWS ++GGF + G G + G P+ TL V+ AC L+ L +G+ H
Sbjct: 802 VSWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHI 861
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ + G + FV LVD+Y +C ++ A +F K ++ V+ +I GY E GN E+
Sbjct: 862 VYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMXERDLVTWTVMIGGYAECGNANES 921
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
LFD+M +G+ P +V+
Sbjct: 922 LVLFDKMR------------------------------------EEGVVPDKVAMVTVVF 945
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
ACA + ++ K + I Q D +G A+++M+ + + +A+ FD +E
Sbjct: 946 ACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRME------ 999
Query: 300 GKMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSSL 345
E NV +W+AM LF ML + P+ T+ +L ACS
Sbjct: 1000 --------EKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHA 1051
Query: 346 ATMERGKQVHA-----YAIRCGYDSDVHIGTALVDMYAKCGSLKHA 386
+E G + + Y++R DV T +VD+ + G L A
Sbjct: 1052 GLVEEGLRFFSXMWEDYSVR----XDVKHYTCVVDLLGRAGRLDEA 1093
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 122/271 (45%), Gaps = 1/271 (0%)
Query: 245 NSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKE 304
+L + +++H A G+ + V LV Y Y+ L A FD + +++ +
Sbjct: 749 TNLTQVRQVHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMV 808
Query: 305 DGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYD 364
GF N F E++ PD YT+ ++ AC L ++ G+ +H + G D
Sbjct: 809 GGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLD 868
Query: 365 SDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRI 424
D + ALVDMY KC ++ AR + ++ DLV+ M+ YA G+ E + F ++
Sbjct: 869 LDHFVCAALVDMYGKCREIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKM 928
Query: 425 LASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGEL 484
G PD ++ ++ + AC G++ D + + + T M+D+ ++ G +
Sbjct: 929 REEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCV 988
Query: 485 GEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
A E ++ + + W A++ HG
Sbjct: 989 ESAREIFDRME-EKNVISWSAMIAAYGYHGQ 1018
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 99/218 (45%), Gaps = 36/218 (16%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKC ++DA+ +F M ERD LV
Sbjct: 880 MYGKCREIEDARFLFDKMXERD------------------------------------LV 903
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+ +IGG+ + G E++ + +M+ EG+ P+ + +V+ ACA+L + + YI
Sbjct: 904 TWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYI 963
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R F + + ++D++ +CG + SA +IF + KN +S + +I Y +G +A
Sbjct: 964 QRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKAL 1023
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMF 218
+LF M G+ I+ S++ L +E F
Sbjct: 1024 DLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFF 1061
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 132/294 (44%), Gaps = 51/294 (17%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC ++DA+ +F M ERD LV
Sbjct: 204 MYVKCREIEDARFLFDKMQERD------------------------------------LV 227
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+ +IGG+ + G E++ + +M+ EG+ P+ + +V+ ACA+L + + YI
Sbjct: 228 TWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYI 287
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R F + + ++D+Y +CG + SA +IF + KN +S + +I Y +G +A
Sbjct: 288 QRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKAL 347
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAF----SMFRDLLMRDGIEPTSFTFGS 236
+LF M G+ I+ S++ L +E SM+ D +R ++ +T
Sbjct: 348 DLFPMMLSSGMLPDKITLASLLYACSHAGLVEEGLRFFSSMWEDYSVRTDVK--HYTCVV 405
Query: 237 VLIACADMNSLRKGKEIHALAI--ALGLQSDTFVGGALVEMYCRYQDLVAAQMA 288
L+ R G+ AL + ++ ++ D + GA + ++D+V A+ A
Sbjct: 406 DLLG-------RAGRLDEALKLIKSMTIEKDEGLWGAFLGACRTHKDVVLAEKA 452
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 76/179 (42%), Gaps = 5/179 (2%)
Query: 352 KQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMH 411
+QVH A G ++ + LV Y+ +L A + + D VS + M+ +A
Sbjct: 755 RQVHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKV 814
Query: 412 GHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHY 471
G FR ++ G RPD+ + + AC +++ G ++ Y L H+
Sbjct: 815 GDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIV--YKFGLDLDHF 872
Query: 472 TC--MVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIE 528
C +VD+ + E+ +A K+ D V W ++GG GN + D++ E
Sbjct: 873 VCAALVDMYGKCREIEDARFLFDKM-XERDLVTWTVMIGGYAECGNANESLVLFDKMRE 930
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 76/173 (43%), Gaps = 12/173 (6%)
Query: 4 KCGSLDD--AKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
K ++DD +K F++ D + +++ A G V A E +RM E N++S
Sbjct: 955 KARTIDDYIQRKKFQL----DVILGTAMIDMHAKCGCVESAREIFDRM-----EEKNVIS 1005
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
WSA+I + +G +A+ + M G+ PN TL S+L AC+ + G F +
Sbjct: 1006 WSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSXMW 1065
Query: 122 RN-GFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCEN 173
+ + +VD+ R G + ALK+ + + + +G C
Sbjct: 1066 EDYSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSMTXEKDEGLWGAFLGACRT 1118
>gi|357454909|ref|XP_003597735.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240430|gb|ABD32288.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355486783|gb|AES67986.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 620
Score = 311 bits (796), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 173/531 (32%), Positives = 288/531 (54%), Gaps = 39/531 (7%)
Query: 69 FTQNGYDEEAIGMLFRMQAEGLEPNART-LSSVLPACARLQKLSLGKEFHGYITRNGFMS 127
F+Q+ Y A + + +P +S+L +C + L+ GK+ H G
Sbjct: 21 FSQSFYHSLATHQTASVDSFPPQPTTHYGYTSLLQSCIDSKALNPGKQLHAQFYHLGIAY 80
Query: 128 NPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQME 187
N + LV +Y +L+A R LFD++
Sbjct: 81 NQDLATKLVHLYAVSNSLLNA-------------------------------RNLFDKIP 109
Query: 188 HLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSL 247
++ + WN +I GY N +D A ++ +L G+ P +FT VL AC+ ++++
Sbjct: 110 ----KQNLFLWNVLIRGYAWNGPHDNAIILYHKML-DYGLRPDNFTLPFVLKACSALSAI 164
Query: 248 RKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGF 307
+G+ IH I G + D FVG AL++MY + ++ A FD+I + +L +
Sbjct: 165 GEGRSIHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAY 224
Query: 308 EPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDV 367
N + ++ L EM + + P T+ ++S+ + +A + G+++H + R G+ S+
Sbjct: 225 AQNGHPDESISLCREMAANGVRPTEATLVTVISSSADVACLPYGREIHGFGWRHGFQSND 284
Query: 368 HIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILAS 427
+ TAL+DMYAKCGS+K A ++R+ +VS NA++T YAMHG + F ++
Sbjct: 285 KVKTALIDMYAKCGSVKVALALFERLREKRVVSWNAIITGYAMHGLAVGALDLFDKMRKE 344
Query: 428 GFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGE 486
RPDHI+F+ L+AC + G ++LM Y + P+++HYTCM+DLL G+L E
Sbjct: 345 D-RPDHITFVGVLAACSRGRLLDEGRALYNLMVRDYGITPTVQHYTCMIDLLGHCGQLDE 403
Query: 487 AYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAY 546
AY+ I+ + + PDS +WGALL C HGN+E ++A ++LIELEP+++GNYV+LAN++A
Sbjct: 404 AYDLIRNMSVKPDSGVWGALLNSCKIHGNVELAELALEKLIELEPDDSGNYVILANMYAQ 463
Query: 547 AGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
+G+W + + RQ M D+R+ K+ CSWIE +++++ F A D SH S+ IY
Sbjct: 464 SGKWEGVEKLRQVMIDKRIKKNIACSWIEVKNKVYAFLAGDVSHSNSDAIY 514
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 165/358 (46%), Gaps = 39/358 (10%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
NL W+ +I G+ NG + AI + +M GL P+ TL VL AC+ L + G+ H
Sbjct: 112 NLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEGRSIH 171
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
Y+ ++G+ + FV L+D+Y +CG ++ A ++F K +++ V N+++ Y +NG+
Sbjct: 172 EYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQNGHP- 230
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
DE+ S+ R+ + +G+ PT T +V
Sbjct: 231 ----------------------------------DESISLCRE-MAANGVRPTEATLVTV 255
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
+ + AD+ L G+EIH G QS+ V AL++MY + + A F+ +
Sbjct: 256 ISSSADVACLPYGREIHGFGWRHGFQSNDKVKTALIDMYAKCGSVKVALALFERLREKRV 315
Query: 298 LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAY 357
+ G+ + A+ LF +M D PD T +L+ACS ++ G+ ++
Sbjct: 316 VSWNAIITGYAMHGLAVGALDLFDKMRKED-RPDHITFVGVLAACSRGRLLDEGRALYNL 374
Query: 358 AIR-CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST-PDLVSQNAMLTAYAMHGH 413
+R G V T ++D+ CG L A + +S PD A+L + +HG+
Sbjct: 375 MVRDYGITPTVQHYTCMIDLLGHCGQLDEAYDLIRNMSVKPDSGVWGALLNSCKIHGN 432
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 141/297 (47%), Gaps = 42/297 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG + DA +VF + RD V WNS++ A
Sbjct: 192 MYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAA---------------------------- 223
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+ QNG+ +E+I + M A G+ P TL +V+ + A + L G+E HG+
Sbjct: 224 --------YAQNGHPDESISLCREMAANGVRPTEATLVTVISSSADVACLPYGREIHGFG 275
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R+GF SN V L+D+Y +CG + AL +F + K VS N II GY +G A
Sbjct: 276 WRHGFQSNDKVKTALIDMYAKCGSVKVALALFERLREKRVVSWNAIITGYAMHGLAVGAL 335
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRD-GIEPTSFTFGSVLI 239
+LFD+M + I++ +++ L DE +++ +L++RD GI PT + ++
Sbjct: 336 DLFDKMRKED-RPDHITFVGVLAACSRGRLLDEGRALY-NLMVRDYGITPTVQHYTCMID 393
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
L E + L + ++ D+ V GAL+ + ++ A++A +++ +E
Sbjct: 394 LLGHCGQL---DEAYDLIRNMSVKPDSGVWGALLNSCKIHGNVELAELALEKLIELE 447
>gi|15128441|dbj|BAB62625.1| P0402A09.8 [Oryza sativa Japonica Group]
gi|20804430|dbj|BAB92127.1| P0455C04.2 [Oryza sativa Japonica Group]
Length = 1122
Score = 311 bits (796), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 185/576 (32%), Positives = 295/576 (51%), Gaps = 42/576 (7%)
Query: 27 NSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQ 86
N+++ A +GL+ A R L+ + V+++A++ G ++ G +A+ + M+
Sbjct: 174 NTLLDAYCKHGLLAAA-----RRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMR 228
Query: 87 AEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDML 146
G+ T SS+L A + L LG + H + R+ + N FV N L+D Y +C +
Sbjct: 229 RAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLD 288
Query: 147 SALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYV 206
++F + ++ VS N II Y N A LF +M+ LG R ++ + +M+S V
Sbjct: 289 DMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLS--V 346
Query: 207 DNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDT 266
SL D + GK+IHA + LGL S+
Sbjct: 347 AGSLPD----------------------------------VHIGKQIHAQLVLLGLASED 372
Query: 267 FVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSL 326
+G AL++MY + L AA+ F + G+ N A+QLFS+M
Sbjct: 373 LLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRA 432
Query: 327 DLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHA 386
L PD T I+ A SSLA + G+Q+H+Y IR GY S V G+ LVDMYAKCG L A
Sbjct: 433 GLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEA 492
Query: 387 RLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHA 446
+ + + +S NA+++AYA +G K I F +L GF PD ++FLS L+AC H
Sbjct: 493 LRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHN 552
Query: 447 GSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGA 505
G ++F LM + Y + P +HY C++D L R G + + + ++P D ++W +
Sbjct: 553 GLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTS 612
Query: 506 LLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRM 565
+L C HGN E ++AAD+L +EP + YV+L+N++A AG+W D A ++ M+DR +
Sbjct: 613 ILHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGV 672
Query: 566 HKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
K G SW+E + +I+ F ++D + +EI +D
Sbjct: 673 RKESGYSWVEIKQKIYSFASNDLTSPMIDEIKDELD 708
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 129/511 (25%), Positives = 227/511 (44%), Gaps = 51/511 (9%)
Query: 6 GSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAV 65
G L A+ +F MP ++ S N +++A +++G + A L + N +W+ +
Sbjct: 57 GHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLF-----LSSPHRNATTWTIM 111
Query: 66 IGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVL--PACARLQKLSLGKEFHGYITRN 123
+ G +A+ + M EG+ P+ T+++VL P C H + +
Sbjct: 112 MRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTV-------PSLHPFAIKF 164
Query: 124 GFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELF 183
G ++ FV CNT++ YC++G +A AR +F
Sbjct: 165 GLDTHVFV-------------------------------CNTLLDAYCKHGLLAAARRVF 193
Query: 184 DQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACAD 243
+M + +++N+M+ G L+ +A +F + R GI T FTF S+L A
Sbjct: 194 LEMH----DKDAVTYNAMMMGCSKEGLHTQALQLFA-AMRRAGIPATHFTFSSILTVAAG 248
Query: 244 MNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMK 303
M L G ++HAL + + FV +L++ Y + L + FDE+ +N+ +
Sbjct: 249 MAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVI 308
Query: 304 EDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGY 363
+ N ++LF EM L + +LS SL + GKQ+HA + G
Sbjct: 309 IAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGL 368
Query: 364 DSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRR 423
S+ +G AL+DMY+KCG L A+ + S +S A++T Y +G +E + F
Sbjct: 369 ASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSD 428
Query: 424 ILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGE 483
+ +G RPD +F S + A I G + + K S+ + +VD+ ++ G
Sbjct: 429 MRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGC 488
Query: 484 LGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
L EA ++P +S+ W A++ +G
Sbjct: 489 LDEALRTFDEMP-ERNSISWNAVISAYAHYG 518
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 136/342 (39%), Gaps = 72/342 (21%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y KC LDD +++F MPERD VS+N ++ A A N L M L
Sbjct: 281 YSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKL--------- 331
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
G+D + + P A LS L + +GK+ H +
Sbjct: 332 -----------GFDRQVL------------PYATMLS----VAGSLPDVHIGKQIHAQLV 364
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
G S + N L+D+Y +CG + +A FS S K+ +S +I GY +NG EA +
Sbjct: 365 LLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQ 424
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
LF M R G+ P TF S++ A
Sbjct: 425 LFSDMR------------------------------------RAGLRPDRATFSSIIKAS 448
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK 301
+ + + G+++H+ I G +S F G LV+MY + L A FDE+ ++
Sbjct: 449 SSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWN 508
Query: 302 MKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACS 343
+ NA+++F ML PD T +L+ACS
Sbjct: 509 AVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACS 550
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 133/299 (44%), Gaps = 45/299 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG LD AK F E+ +SW +++T N
Sbjct: 381 MYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQN------------------------ 416
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
G EEA+ + M+ GL P+ T SS++ A + L + LG++ H Y+
Sbjct: 417 ------------GQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYL 464
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R+G+ S+ F + LVD+Y +CG + AL+ F + +N +S N +I Y G A
Sbjct: 465 IRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAI 524
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
++F+ M H G +++ S+++ N L DE F + + I P + V+
Sbjct: 525 KMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDT 584
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRY---QDLVAAQMAFDEIENIE 296
+ ++ + + + ++D + +++ CR Q+L A++A D++ +E
Sbjct: 585 LGRVGCF---SQVQKMLVEMPFKADPIIWTSILH-SCRIHGNQEL--ARVAADKLFGME 637
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/373 (23%), Positives = 150/373 (40%), Gaps = 36/373 (9%)
Query: 173 NGNVAEARELFDQMEHLGV---------------------------QRGIISWNSMISGY 205
+G++ AR +FDQM H + R +W M+ +
Sbjct: 56 SGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAH 115
Query: 206 VDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL-IACADMNSLRKGKEIHALAIALGLQS 264
+A S+FR +L +G+ P T +VL + + SL H AI GL +
Sbjct: 116 AAAGRTSDALSLFRAML-GEGVIPDRVTVTTVLNLPGCTVPSL------HPFAIKFGLDT 168
Query: 265 DTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEML 324
FV L++ YC++ L AA+ F E+ + + + G A+QLF+ M
Sbjct: 169 HVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMR 228
Query: 325 SLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLK 384
+ +T IL+ + +A + G QVHA +R +V + +L+D Y+KC L
Sbjct: 229 RAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLD 288
Query: 385 HARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACV 444
R + + D VS N ++ AYA + + FR + GF + + + LS
Sbjct: 289 DMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAG 348
Query: 445 HAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWG 504
+ G + + + ++D+ S+ G L A ++ W
Sbjct: 349 SLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRS-EKSAISWT 407
Query: 505 ALLGGCVSHGNLE 517
AL+ G V +G E
Sbjct: 408 ALITGYVQNGQHE 420
>gi|125552577|gb|EAY98286.1| hypothetical protein OsI_20194 [Oryza sativa Indica Group]
Length = 874
Score = 311 bits (796), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 181/613 (29%), Positives = 305/613 (49%), Gaps = 105/613 (17%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG ++DAK VF M RD +V
Sbjct: 245 MYAKCGLVEDAKSVFNWMETRD------------------------------------MV 268
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ ++ G N + EA+ + +A + T ++V+ CA L++L+L ++ H +
Sbjct: 269 SWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCV 328
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
++GF V+ L D Y +CG++ AL IFS + G
Sbjct: 329 LKHGFHLTGNVMTALADAYSKCGELADALNIFS------------MTTG----------- 365
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
R ++SW ++ISG + N A +F + D + P FT+ ++L A
Sbjct: 366 -----------SRNVVSWTAIISGCIQNGDIPLAVVLF-SRMREDRVMPNEFTYSAMLKA 413
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
+ +IHA I Q VG AL+ Y ++ A F IE
Sbjct: 414 SLSILP----PQIHAQVIKTNYQHIPSVGTALLASYSKFGSTEDALSIFKMIE------- 462
Query: 301 KMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACS-SL 345
+ +V W+AM LF++M + P+ +T+ ++ AC+
Sbjct: 463 -------QKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPS 515
Query: 346 ATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAML 405
A +++G+Q HA +I+ Y + + +ALV MY++ G++ A++ ++R + DLVS N+M+
Sbjct: 516 AGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMI 575
Query: 406 TAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDV 464
+ YA HG+ + I FR++ ASG + D ++FL+ + C H G + G ++FD M + +
Sbjct: 576 SGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKI 635
Query: 465 KPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAAD 524
P+++HY CMVDL SRAG+L E I+ +P +++W LLG C H N+E G+ +AD
Sbjct: 636 NPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGACRVHKNVELGKFSAD 695
Query: 525 RLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFR 584
+L+ LEP+++ YV+L+N++A AG+W + R+ M R++ K GCSWI+ ++++H F
Sbjct: 696 KLLSLEPHDSSTYVLLSNIYAAAGKWKERDEVRKLMDYRKVKKEAGCSWIQIKNKVHSFI 755
Query: 585 ASDRSHDRSEEIY 597
A D+SH S++IY
Sbjct: 756 AFDKSHPMSDQIY 768
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 126/516 (24%), Positives = 217/516 (42%), Gaps = 79/516 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGS+ + +VF+ MP++ N+V
Sbjct: 144 MYMKCGSVCEGIEVFEGMPKK------------------------------------NVV 167
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W++++ G E + + FRM+AEG+ PN T +SVL A A L LG+ H
Sbjct: 168 TWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQS 227
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G S+ FV N L+++Y +CG + A +F+ ++ VS NT++ G N EA
Sbjct: 228 VKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEAL 287
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+LF + R + + T T+ +V+
Sbjct: 288 QLFHE------SRATMG------------------------------KMTQSTYATVIKL 311
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA++ L +++H+ + G V AL + Y + +L A F N++
Sbjct: 312 CANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVS 371
Query: 301 -KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
G N A+ LFS M + P+ +T +L A S+ Q+HA I
Sbjct: 372 WTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASLSILP----PQIHAQVI 427
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
+ Y +GTAL+ Y+K GS + A +K I D+V+ +AML+ +A G +
Sbjct: 428 KTNYQHIPSVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATY 487
Query: 420 HFRRILASGFRPDHISFLSALSACV-HAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLL 478
F ++ G +P+ + S + AC + + G +F + Y ++ + +V +
Sbjct: 488 LFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMY 547
Query: 479 SRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
SR G + A + + + D V W +++ G HG
Sbjct: 548 SRKGNIDSA-QIVFERQTDRDLVSWNSMISGYAQHG 582
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 111/463 (23%), Positives = 192/463 (41%), Gaps = 59/463 (12%)
Query: 65 VIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNG 124
V+ + + G E + + G+ ++ TLS VL AC + LG++ H + G
Sbjct: 70 VLFDYARRGMVPEVLDQFSVARRGGVLVDSATLSCVLKACRSVPDRVLGEQLHCLCVKCG 129
Query: 125 FMSNPFVV-NGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELF 183
LVD+Y +CG + +++F KN V
Sbjct: 130 HDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVV---------------------- 167
Query: 184 DQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMR-DGIEPTSFTFGSVLIACA 242
+W S+++G ++ E ++F MR +GI P FTF SVL A A
Sbjct: 168 -------------TWTSLLTGCAHAQMHSEVMALF--FRMRAEGIWPNPFTFASVLSAVA 212
Query: 243 DMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKM 302
+L G+ +HA ++ G +S FV +L+ MY + + A+ F+ +E + +
Sbjct: 213 SQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNT 272
Query: 303 KEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCG 362
G + N A+QLF E + T ++ C++L + +Q+H+ ++ G
Sbjct: 273 LMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHG 332
Query: 363 YDSDVHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNAMLTAYAMHGHGKEGIAHF 421
+ ++ TAL D Y+KCG L A + + + ++VS A+++ +G + F
Sbjct: 333 FHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLF 392
Query: 422 RRILASGFRPDHISF-------LSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCM 474
R+ P+ ++ LS L +HA IKT Y PS+ T +
Sbjct: 393 SRMREDRVMPNEFTYSAMLKASLSILPPQIHAQVIKTN---------YQHIPSVG--TAL 441
Query: 475 VDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
+ S+ G +A K I D V W A+L G+ E
Sbjct: 442 LASYSKFGSTEDALSIFKMIEQK-DVVAWSAMLSCHAQAGDCE 483
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 159/359 (44%), Gaps = 32/359 (8%)
Query: 199 NSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAI 258
N ++ Y + E F + R G+ S T VL AC + G+++H L +
Sbjct: 68 NRVLFDYARRGMVPEVLDQF-SVARRGGVLVDSATLSCVLKACRSVPDRVLGEQLHCLCV 126
Query: 259 ALGL-QSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAM 317
G + + G +LV+MY + + E IE G K+ NV TW ++
Sbjct: 127 KCGHDRGEVSAGTSLVDMYMKCGSVC---------EGIEVFEGMPKK-----NVVTWTSL 172
Query: 318 -------QLFSEMLSL-------DLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGY 363
Q+ SE+++L + P+ +T +LSA +S ++ G++VHA +++ G
Sbjct: 173 LTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGC 232
Query: 364 DSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRR 423
S V + +L++MYAKCG ++ A+ + + T D+VS N ++ ++ E + F
Sbjct: 233 RSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHE 292
Query: 424 ILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGE 483
A+ + ++ + + C + + + + + + T + D S+ GE
Sbjct: 293 SRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGE 352
Query: 484 LGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIE--LEPNNTGNYVML 540
L +A + + V W A++ GC+ +G++ + R+ E + PN ML
Sbjct: 353 LADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAML 411
>gi|359474320|ref|XP_002270938.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g22760-like [Vitis vinifera]
Length = 580
Score = 311 bits (796), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 183/527 (34%), Positives = 285/527 (54%), Gaps = 18/527 (3%)
Query: 54 NETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLG 113
+++P+ SW+ I TQ+G +EA + +MQ GL P LSS L ACAR+ G
Sbjct: 65 SKSPDSFSWACAIRFSTQHGQFKEAFALYVQMQRWGLCPTTFALSSALKACARIAYRMGG 124
Query: 114 KEFHGYITRNGFM---SNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGY 170
HG + + GF +V LVD Y + GDM A K+F + + +N VS N+++ GY
Sbjct: 125 ISIHGQVQKFGFSCGGDGIYVETALVDFYCKLGDMEIARKMFDEMAERNVVSWNSMLAGY 184
Query: 171 CENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPT 230
++G++ A+ +FD++ Q+ +ISWNSMISGY ++A S+F+ + R+
Sbjct: 185 LKSGDLVVAQRVFDEIP----QKDVISWNSMISGYARAGDMEKASSLFQQMPERNFASWN 240
Query: 231 SFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFD 290
+ G V D++S R + Q + ++ Y + D+ +A FD
Sbjct: 241 AMISGHVEFG--DIDSARSFFDAMP-------QKNNVSWMTMISGYSKCGDVDSACELFD 291
Query: 291 EIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLS--LDLTPDIYTVGIILSACSSLATM 348
++ + LL + N A+ LF+ ML+ +++ PD T+ ++SACS L +
Sbjct: 292 QVGGKDLLLFNAMIACYAQNSRPNEALNLFNNMLNPYVNVQPDEMTLASVISACSQLGDL 351
Query: 349 ERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAY 408
G + +Y R G + D H+ TAL+D+YAKCGS+ A + + DLV+ AM+
Sbjct: 352 RFGPWIESYMRRLGIEMDGHLATALLDLYAKCGSIDKAYELFHGLRKKDLVAYTAMILGC 411
Query: 409 AMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSL 468
++G + I F ++ + P+ I+F+ L+A HAG ++ G F M Y++ PS+
Sbjct: 412 GINGKAIDAIKLFDEMVDAQIFPNSITFIGLLTAYNHAGLVEEGYRCFTSMKKYNLVPSV 471
Query: 469 KHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIE 528
HY MVDL RAG L EA E IK +PM P + +WGALL C H N+EFG+IAA E
Sbjct: 472 DHYGIMVDLFGRAGRLQEALELIKSMPMQPHAGVWGALLLACRLHNNVEFGEIAAQHCFE 531
Query: 529 LEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIE 575
LEP+ TG +L+N++A RW D+ R R+ K++ K PGCSW+E
Sbjct: 532 LEPDTTGYRSLLSNIYASGERWDDVKRLRKVTKEKGFSKIPGCSWME 578
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 116/451 (25%), Positives = 196/451 (43%), Gaps = 58/451 (12%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y K G ++ A+K+F M ER+ VSWNS++ +G ++ A + + D ++S
Sbjct: 153 YCKLGDMEIARKMFDEMAERNVVSWNSMLAGYLKSGDLVVAQRVFDEIPQKD-----VIS 207
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W+++I G+ + G D E LF+ E
Sbjct: 208 WNSMISGYARAG-DMEKASSLFQQMPE--------------------------------- 233
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
RN F S +++G V+ GD+ SA F KN VS T+I GY + G+V A E
Sbjct: 234 RN-FASWNAMISGHVEF----GDIDSARSFFDAMPQKNNVSWMTMISGYSKCGDVDSACE 288
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLL-MRDGIEPTSFTFGSVLIA 240
LFDQ+ + ++ +N+MI+ Y NS +EA ++F ++L ++P T SV+ A
Sbjct: 289 LFDQVG----GKDLLLFNAMIACYAQNSRPNEALNLFNNMLNPYVNVQPDEMTLASVISA 344
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C+ + LR G I + LG++ D + AL+++Y + + A F + + +
Sbjct: 345 CSQLGDLRFGPWIESYMRRLGIEMDGHLATALLDLYAKCGSIDKAYELFHGLRKKDLVAY 404
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G N +A++LF EM+ + P+ T +L+A + +E G + +
Sbjct: 405 TAMILGCGINGKAIDAIKLFDEMVDAQIFPNSITFIGLLTAYNHAGLVEEGYRCFTSMKK 464
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNAMLTAYAMHGHGKEGIA 419
V +VD++ + G L+ A K + P A+L A +H +
Sbjct: 465 YNLVPSVDHYGIMVDLFGRAGRLQEALELIKSMPMQPHAGVWGALLLACRLHNN-----V 519
Query: 420 HFRRILASG---FRPDHISFLSALSACVHAG 447
F I A PD + S LS +G
Sbjct: 520 EFGEIAAQHCFELEPDTTGYRSLLSNIYASG 550
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNET-PNL 59
+Y KCGS+D A ++F + ++D V++ +++ C NG ++A++ + M +D + PN
Sbjct: 379 LYAKCGSIDKAYELFHGLRKKDLVAYTAMILGCGINGKAIDAIKLFDEM--VDAQIFPNS 436
Query: 60 VSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPN 93
+++ ++ + G EE M+ L P+
Sbjct: 437 ITFIGLLTAYNHAGLVEEGYRCFTSMKKYNLVPS 470
>gi|225444329|ref|XP_002264248.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
[Vitis vinifera]
Length = 767
Score = 311 bits (796), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 191/625 (30%), Positives = 307/625 (49%), Gaps = 92/625 (14%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
YGKCG A +VF MPE S+D +VS
Sbjct: 97 YGKCGHAYYAAQVFDEMPE-----------------------------GSVD-----VVS 122
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQ-------AEGLEPNARTLSSVLPACA---RLQKLS 111
W+A+I ++ NG +EA RM+ +E + +L +++ ACA L
Sbjct: 123 WTALISAYSSNGCVDEAFKAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLR 182
Query: 112 LGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYC 171
G HG + + GF + + N +V +Y C D+ A ++F+ I+
Sbjct: 183 RGSAVHGLVVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIE------------- 229
Query: 172 ENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMR--DGIEP 229
QR ++SWNS+ISG+ N + A F D++ +EP
Sbjct: 230 --------------------QRDVVSWNSLISGFTLNGEAERALRTFEDMVSEGTSAVEP 269
Query: 230 TSFTFGSVLIACADMNSLRKGKEIH----ALAIALGLQSDTFVGGALVEMYCRYQDLVAA 285
T ++L +CA++ + +H + +L + D V AL++M+ R +L A
Sbjct: 270 NRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLVAKDVVVLTALLDMHARCGNLALA 329
Query: 286 QMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEML------SLDLTPDIYTVGIIL 339
+ FD +E + G+E A++LF +ML +++ P+ T+ ++
Sbjct: 330 REIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGNMVGVEVKPNAVTLVSVI 389
Query: 340 SACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRI--STPD 397
+ACS L +H YA+ G D D I +AL+DM AKCG ++H R + + ST
Sbjct: 390 AACSRLGASRSASMIHKYAVATGLDQDARIASALIDMCAKCGDIEHGRQVFSEMDESTRT 449
Query: 398 LVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFD 457
+VS ++M+ A +HG GK + F + G+ P+ I+++S LSAC HAG ++ G F+
Sbjct: 450 VVSWSSMIGAEGIHGEGKRALELFSEMRTGGYEPNEITYISVLSACSHAGLVEQGKSCFN 509
Query: 458 LMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNL 516
M Y + P+ KHY C+VDLL RAG L EA+ I +P+ D +WG+LL C HGN
Sbjct: 510 SMEKDYGMSPTGKHYACLVDLLGRAGHLDEAHNVILNMPIKADLALWGSLLAACHLHGNC 569
Query: 517 EFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIED 576
+ G+I +++ L+ N+ G++V+LAN++ AGRW D+ R R +++ + K PG S+IE
Sbjct: 570 KLGEIVEKKILSLDSNSVGHHVLLANMYEDAGRWDDVVRMRVELRRSGLRKIPGQSFIEI 629
Query: 577 RDEIHKFRASDRSHDRSEEIYTIID 601
+E++ F A DRSH SE IY +D
Sbjct: 630 GNEVYSFMAEDRSHPESEMIYKELD 654
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 136/519 (26%), Positives = 236/519 (45%), Gaps = 72/519 (13%)
Query: 62 WSAVIG-GFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
W+++I TQN + A+ RMQA + N T ++L ACA L++L + H Y+
Sbjct: 21 WNSLIAKNATQN--PQTALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLPTLQVHAYL 78
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
TR G ++ F LVD Y +CG A ++F
Sbjct: 79 TRLGLAADRFSAAALVDAYGKCGHAYYAAQVF---------------------------- 110
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMF-RDLLMR--DGIEPTS---FTF 234
D+M V ++SW ++IS Y N DEAF F R MR DG E +
Sbjct: 111 ---DEMPEGSVD--VVSWTALISAYSSNGCVDEAFKAFGRMRWMRGWDGSECCGVDVVSL 165
Query: 235 GSVLIACA---DMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFD- 290
G+++ ACA N LR+G +H L + G T +G ++V MY +D+ A F+
Sbjct: 166 GALVSACAVGCGSNCLRRGSAVHGLVVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNG 225
Query: 291 -EIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLT---PDIYTVGIILSACSSLA 346
IE + + GF N A++ F +M+S + P+ TV +L +C+ L
Sbjct: 226 IPIEQRDVVSWNSLISGFTLNGEAERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELG 285
Query: 347 TMERGKQVHAYAIRCGYDS-----DVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQ 401
+E VH Y I + S DV + TAL+DM+A+CG+L AR + + ++V
Sbjct: 286 CVETSSWVHEY-ISSRHSSLLVAKDVVVLTALLDMHARCGNLALAREIFDGVEGKNVVCW 344
Query: 402 NAMLTAYAMHGHGKEGIAHFRRILASG------FRPDHISFLSALSACVHAGSIKTGSEF 455
+AM+ Y +E + FR++L G +P+ ++ +S ++AC G+ ++ S
Sbjct: 345 SAMIAGYEQGSCPEEALRLFRQMLMEGNMVGVEVKPNAVTLVSVIAACSRLGASRSASMI 404
Query: 456 FDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVM-WGALLGGCVSHG 514
+ + + ++D+ ++ G++ + ++ + +V+ W +++G HG
Sbjct: 405 HKYAVATGLDQDARIASALIDMCAKCGDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHG 464
Query: 515 NLEFGQIAADRLIEL-----EPNNTGNYVMLANLFAYAG 548
G+ A + E+ EPN Y+ + + ++AG
Sbjct: 465 E---GKRALELFSEMRTGGYEPNEI-TYISVLSACSHAG 499
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/379 (22%), Positives = 166/379 (43%), Gaps = 32/379 (8%)
Query: 198 WNSMISGYVDNSLYDEAFSM-FRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHAL 256
WNS+I+ N+ + ++ F + + +FTF ++L ACA + L ++HA
Sbjct: 21 WNSLIA---KNATQNPQTALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLPTLQVHAY 77
Query: 257 AIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE--NIENLLGKMKEDGFEPNVYTW 314
LGL +D F ALV+ Y + A FDE+ +++ + + N
Sbjct: 78 LTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYSSNGCVD 137
Query: 315 NAMQLFSEMLSLD-------LTPDIYTVGIILSACS---SLATMERGKQVHAYAIRCGYD 364
A + F M + D+ ++G ++SAC+ + RG VH ++ G+
Sbjct: 138 EAFKAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVHGLVVKYGFG 197
Query: 365 SDVHIGTALVDMYAKCGSLKHARLAYK--RISTPDLVSQNAMLTAYAMHGHGKEGIAHFR 422
H+G ++V MY+ C + A + I D+VS N++++ + ++G + + F
Sbjct: 198 VSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFTLNGEAERALRTFE 257
Query: 423 RILASG---FRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYD----VKPSLKHYTCMV 475
+++ G P+ ++ ++ L +C G ++T S + ++ V + T ++
Sbjct: 258 DMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLVAKDVVVLTALL 317
Query: 476 DLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTG 535
D+ +R G L A E + + V W A++ G G+ + R + +E N G
Sbjct: 318 DMHARCGNLALAREIFDGVE-GKNVVCWSAMIAG-YEQGSCPEEALRLFRQMLMEGNMVG 375
Query: 536 -----NYVMLANLFAYAGR 549
N V L ++ A R
Sbjct: 376 VEVKPNAVTLVSVIAACSR 394
>gi|147833186|emb|CAN68635.1| hypothetical protein VITISV_030802 [Vitis vinifera]
Length = 767
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 191/625 (30%), Positives = 307/625 (49%), Gaps = 92/625 (14%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
YGKCG A +VF MPE S+D +VS
Sbjct: 97 YGKCGHAYYAAQVFDEMPE-----------------------------GSVD-----VVS 122
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQ-------AEGLEPNARTLSSVLPACA---RLQKLS 111
W+A+I ++ NG +EA RM+ +E + +L +++ ACA L
Sbjct: 123 WTALISAYSSNGCVDEAFXAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLR 182
Query: 112 LGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYC 171
G HG + + GF + + N +V +Y C D+ A ++F+ I+
Sbjct: 183 RGSAVHGLVVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIE------------- 229
Query: 172 ENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMR--DGIEP 229
QR ++SWNS+ISG+ N + A F D++ +EP
Sbjct: 230 --------------------QRDVVSWNSLISGFXLNGEAERALRTFEDMVSEGTSAVEP 269
Query: 230 TSFTFGSVLIACADMNSLRKGKEIH----ALAIALGLQSDTFVGGALVEMYCRYQDLVAA 285
T ++L +CA++ + +H + +L + D V AL++M+ R +L A
Sbjct: 270 NRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLVAKDVVVLTALLDMHARCGNLALA 329
Query: 286 QMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEML------SLDLTPDIYTVGIIL 339
+ FD +E + G+E A++LF +ML +++ P+ T+ ++
Sbjct: 330 REIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGNMVGVEVKPNAVTLVSVI 389
Query: 340 SACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRI--STPD 397
+ACS L +H YA+ G D D I +AL+DM AKCG ++H R + + ST
Sbjct: 390 AACSRLGASRSASMIHKYAVATGLDQDARIASALIDMCAKCGDIEHGRQVFSEMDESTRT 449
Query: 398 LVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFD 457
+VS ++M+ A +HG GK + F + G+ P+ I+++S LSAC HAG ++ G F+
Sbjct: 450 VVSWSSMIGAEGIHGEGKRALELFSEMRTGGYEPNEITYISVLSACSHAGLVEQGKSCFN 509
Query: 458 LMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNL 516
M Y + P+ KHY C+VDLL RAG L EA+ I +P+ D +WG+LL C HGN
Sbjct: 510 SMEKDYGMSPTGKHYACLVDLLGRAGHLDEAHNVILNMPIKADLALWGSLLAACHLHGNC 569
Query: 517 EFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIED 576
+ G+I +++ L+ N+ G++V+LAN++ AGRW D+ R R +++ + K PG S+IE
Sbjct: 570 KLGEIVEKKILSLDSNSVGHHVLLANMYEDAGRWDDVVRMRVELRRSGLRKIPGQSFIEI 629
Query: 577 RDEIHKFRASDRSHDRSEEIYTIID 601
+E++ F A DRSH SE IY +D
Sbjct: 630 GNEVYSFMAEDRSHPESEMIYKELD 654
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 136/519 (26%), Positives = 236/519 (45%), Gaps = 72/519 (13%)
Query: 62 WSAVIG-GFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
W+++I TQN + A+ RMQA + N T ++L ACA L++L + H Y+
Sbjct: 21 WNSLIAKNATQN--PQTALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLPTLQVHAYL 78
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
TR G ++ F LVD Y +CG A ++F
Sbjct: 79 TRLGLAADRFSAAALVDAYGKCGHAYYAAQVF---------------------------- 110
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMF-RDLLMR--DGIEPTS---FTF 234
D+M V ++SW ++IS Y N DEAF F R MR DG E +
Sbjct: 111 ---DEMPEGSVD--VVSWTALISAYSSNGCVDEAFXAFGRMRWMRGWDGSECCGVDVVSL 165
Query: 235 GSVLIACA---DMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFD- 290
G+++ ACA N LR+G +H L + G T +G ++V MY +D+ A F+
Sbjct: 166 GALVSACAVGCGSNCLRRGSAVHGLVVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNG 225
Query: 291 -EIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLT---PDIYTVGIILSACSSLA 346
IE + + GF N A++ F +M+S + P+ TV +L +C+ L
Sbjct: 226 IPIEQRDVVSWNSLISGFXLNGEAERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELG 285
Query: 347 TMERGKQVHAYAIRCGYDS-----DVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQ 401
+E VH Y I + S DV + TAL+DM+A+CG+L AR + + ++V
Sbjct: 286 CVETSSWVHEY-ISSRHSSLLVAKDVVVLTALLDMHARCGNLALAREIFDGVEGKNVVCW 344
Query: 402 NAMLTAYAMHGHGKEGIAHFRRILASG------FRPDHISFLSALSACVHAGSIKTGSEF 455
+AM+ Y +E + FR++L G +P+ ++ +S ++AC G+ ++ S
Sbjct: 345 SAMIAGYEQGSCPEEALRLFRQMLMEGNMVGVEVKPNAVTLVSVIAACSRLGASRSASMI 404
Query: 456 FDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVM-WGALLGGCVSHG 514
+ + + ++D+ ++ G++ + ++ + +V+ W +++G HG
Sbjct: 405 HKYAVATGLDQDARIASALIDMCAKCGDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHG 464
Query: 515 NLEFGQIAADRLIEL-----EPNNTGNYVMLANLFAYAG 548
G+ A + E+ EPN Y+ + + ++AG
Sbjct: 465 E---GKRALELFSEMRTGGYEPNEI-TYISVLSACSHAG 499
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 86/379 (22%), Positives = 165/379 (43%), Gaps = 32/379 (8%)
Query: 198 WNSMISGYVDNSLYDEAFSM-FRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHAL 256
WNS+I+ N+ + ++ F + + +FTF ++L ACA + L ++HA
Sbjct: 21 WNSLIA---KNATQNPQTALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLPTLQVHAY 77
Query: 257 AIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE--NIENLLGKMKEDGFEPNVYTW 314
LGL +D F ALV+ Y + A FDE+ +++ + + N
Sbjct: 78 LTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYSSNGCVD 137
Query: 315 NAMQLFSEMLSLD-------LTPDIYTVGIILSACS---SLATMERGKQVHAYAIRCGYD 364
A F M + D+ ++G ++SAC+ + RG VH ++ G+
Sbjct: 138 EAFXAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVHGLVVKYGFG 197
Query: 365 SDVHIGTALVDMYAKCGSLKHARLAYK--RISTPDLVSQNAMLTAYAMHGHGKEGIAHFR 422
H+G ++V MY+ C + A + I D+VS N++++ + ++G + + F
Sbjct: 198 VSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFXLNGEAERALRTFE 257
Query: 423 RILASG---FRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYD----VKPSLKHYTCMV 475
+++ G P+ ++ ++ L +C G ++T S + ++ V + T ++
Sbjct: 258 DMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLVAKDVVVLTALL 317
Query: 476 DLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTG 535
D+ +R G L A E + + V W A++ G G+ + R + +E N G
Sbjct: 318 DMHARCGNLALAREIFDGVE-GKNVVCWSAMIAG-YEQGSCPEEALRLFRQMLMEGNMVG 375
Query: 536 -----NYVMLANLFAYAGR 549
N V L ++ A R
Sbjct: 376 VEVKPNAVTLVSVIAACSR 394
>gi|359473818|ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Vitis vinifera]
Length = 611
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 175/504 (34%), Positives = 278/504 (55%), Gaps = 43/504 (8%)
Query: 107 LQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALK-----IFSKFSIKNEV 161
+Q L +EF G+++ + F S+ + N L D ++ D S K I + +
Sbjct: 18 VQSAKLTQEFVGHVSPSEFNSHAYA-NALQDCIQK--DEPSRGKGLHCEILKRGGCLDLF 74
Query: 162 SCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDL 221
+ N ++ Y ++ + +A +LFD+M +R IS+ ++I GY ++ + EA +F +
Sbjct: 75 AWNILLNMYVKSDFLCDASKLFDEMP----ERNTISFVTLIQGYAESVRFLEAIELF--V 128
Query: 222 LMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQD 281
+ + P FTF SVL ACA M L G +IH I +GL SD FV AL+++Y +
Sbjct: 129 RLHREVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAK--- 185
Query: 282 LVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWN--------------AMQLFSEMLSLD 327
+EN + E +V TWN A++LF ML
Sbjct: 186 ----------CGRMENSMELFAESPHRNDV-TWNTVIVGHVQLGDGEKALRLFLNMLEYR 234
Query: 328 LTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHAR 387
+ T L AC+SLA +E G Q+H+ ++ +D D+ + AL+DMYAKCGS+K AR
Sbjct: 235 VQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDAR 294
Query: 388 LAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAG 447
L + ++ D VS NAM++ Y+MHG G+E + F ++ + +PD ++F+ LSAC +AG
Sbjct: 295 LVFDLMNKQDEVSWNAMISGYSMHGLGREALRIFDKMQETEVKPDKLTFVGVLSACANAG 354
Query: 448 SIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGAL 506
+ G +F M + ++P ++HYTCMV LL R G L +A + I +IP P ++W AL
Sbjct: 355 LLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRAL 414
Query: 507 LGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMH 566
LG CV H ++E G+I+A R++E+EP + +V+L+N++A A RW ++A R+ MK + +
Sbjct: 415 LGACVIHNDIELGRISAQRVLEMEPQDKATHVLLSNMYATAKRWDNVASVRKNMKRKGVK 474
Query: 567 KSPGCSWIEDRDEIHKFRASDRSH 590
K PG SWIE + +H F D SH
Sbjct: 475 KEPGLSWIESQGTVHSFTVGDTSH 498
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 107/408 (26%), Positives = 191/408 (46%), Gaps = 48/408 (11%)
Query: 22 DCVSWNSVVTACAANGLVLEALECLERMSSLDNETP--NLVSWSAVIGGFTQNGYDEEAI 79
D +WN ++ + + +A S L +E P N +S+ +I G+ ++ EAI
Sbjct: 72 DLFAWNILLNMYVKSDFLCDA-------SKLFDEMPERNTISFVTLIQGYAESVRFLEAI 124
Query: 80 GMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVY 139
+ R+ E L PN T +SVL ACA ++ L+LG + H ++ + G S+ FV N L+DVY
Sbjct: 125 ELFVRLHREVL-PNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVY 183
Query: 140 RRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWN 199
+CG M +++++F++ +N+V+ NT+IVG+ + G+ +A LF M VQ
Sbjct: 184 AKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQ------- 236
Query: 200 SMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIA 259
T T+ S L ACA + +L G +IH+L +
Sbjct: 237 -----------------------------ATEVTYSSALRACASLAALEPGLQIHSLTVK 267
Query: 260 LGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQL 319
D V AL++MY + + A++ FD + + + G+ + A+++
Sbjct: 268 TTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHGLGREALRI 327
Query: 320 FSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR-CGYDSDVHIGTALVDMYA 378
F +M ++ PD T +LSAC++ +++G+ I+ G + + T +V +
Sbjct: 328 FDKMQETEVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLG 387
Query: 379 KCGSLKHARLAYKRIS-TPDLVSQNAMLTAYAMHGHGKEGIAHFRRIL 425
+ G L A I P ++ A+L A +H + G +R+L
Sbjct: 388 RGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIHNDIELGRISAQRVL 435
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 53/93 (56%), Gaps = 2/93 (2%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGS+ DA+ VF +M ++D VSWN++++ + +GL EAL ++M + + P+ +
Sbjct: 283 MYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHGLGREALRIFDKMQETEVK-PDKL 341
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRM-QAEGLEP 92
++ V+ G ++ M Q G+EP
Sbjct: 342 TFVGVLSACANAGLLDQGQAYFTSMIQDHGIEP 374
>gi|358345892|ref|XP_003637008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355502943|gb|AES84146.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 647
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 185/553 (33%), Positives = 291/553 (52%), Gaps = 50/553 (9%)
Query: 60 VSWSAVIGGFTQNGYDEEAIGMLFRMQA-EGLEPNARTLSSVLPACARLQKLSLGKEFHG 118
VSW++++ ++ +A+ + M G+ P+ + ++LP L
Sbjct: 24 VSWNSIVSVYSHCFVPNDAVFLFREMTVGYGILPDTVGVVNILPVSGFL----------- 72
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
GF FV N LVD+Y +CG M A K+F + K+ V+ N ++ GY +NG +
Sbjct: 73 -----GF----FVGNALVDMYAKCGKMEDASKVFERMRFKDVVTWNAMVTGYSQNGRFED 123
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
A LF +M ++ +++W+S+ISGY EA +FR + P T S+L
Sbjct: 124 ALSLFGKMREEKIELDVVTWSSVISGYAQRGFGCEAMDVFRQMC-GCRCRPNVVTLMSLL 182
Query: 239 IACADMNSLRKGKEIHALAIALGLQ-------SDTFVGGALVEMYCRYQDLVAAQMAFDE 291
ACA + +L GKE H ++ L+ D V AL++MY + + L A+ FDE
Sbjct: 183 SACASVGALLHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFDE 242
Query: 292 I--ENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLD--LTPDIYTVGIILSACSSLAT 347
I ++ + + + G+ + +A+QLFSEM +D + P+ +T+ +L AC+ LA
Sbjct: 243 ICPKDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPNDFTISCVLMACARLAA 302
Query: 348 MERGKQVHAYAIR-CGYDSDV-HIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAML 405
++ GKQ+HAY +R DSDV + L+DMY+K G + A++ + +S + VS ++L
Sbjct: 303 LKFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAVSWTSLL 362
Query: 406 TAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDV 464
T Y MHG + D I+FL L AC H+G + G + F M+ + V
Sbjct: 363 TGYGMHG--------------AALVLDGITFLVVLYACSHSGMVDRGIDLFYRMSKDFVV 408
Query: 465 KPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAAD 524
P ++HY CM DL RAG L EA I + M P V+W ALL C +H N E + AA
Sbjct: 409 DPGVEHYACMADLFGRAGRLCEATRLINDMSMEPTPVVWIALLSACRTHSNEELAEFAAK 468
Query: 525 RLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFR 584
+L+EL+ +N G Y +L+N++A A RW D+AR R MK + K PG SW++ R + F
Sbjct: 469 KLLELKADNDGTYTLLSNIYANARRWKDVARIRYLMKRTGIKKRPGWSWVKGRKGMETFY 528
Query: 585 ASDRSHDRSEEIY 597
DR+H +S++IY
Sbjct: 529 VGDRTHLQSQKIY 541
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 127/435 (29%), Positives = 197/435 (45%), Gaps = 66/435 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG ++DA KVF+ M +D V+WN++VT + NG +AL +M E ++V
Sbjct: 83 MYAKCGKMEDASKVFERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEKIEL-DVV 141
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+WS+VI G+ Q G+ EA+ + +M PN TL S+L ACA + L GKE H Y
Sbjct: 142 TWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSACASVGALLHGKETHCYS 201
Query: 121 TR-------NGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNE--VSCNTIIVGYC 171
+ N + V+N L+D+Y +C + A +F + K+ V+ +I GY
Sbjct: 202 VKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYA 261
Query: 172 ENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTS 231
++G+ A +LF +M +DN I P
Sbjct: 262 QHGDANHALQLFSEMFK-----------------IDNC-----------------IVPND 287
Query: 232 FTFGSVLIACADMNSLRKGKEIHALAIALG-LQSDT-FVGGALVEMYCRYQDLVAAQMAF 289
FT VL+ACA + +L+ GK+IHA + + SD FV L++MY + D+ AQ+ F
Sbjct: 288 FTISCVLMACARLAALKFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVF 347
Query: 290 DEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATME 349
D + + N +W ++ M L D T ++L ACS ++
Sbjct: 348 DSMS--------------KRNAVSWTSLLTGYGMHGAALVLDGITFLVVLYACSHSGMVD 393
Query: 350 RGKQVHAYAIRCGY--DSDVHIGTALVDMYAKCGSLKHA-RLAYKRISTPDLVSQNAMLT 406
RG + Y + + D V + D++ + G L A RL P V A+L+
Sbjct: 394 RGIDLF-YRMSKDFVVDPGVEHYACMADLFGRAGRLCEATRLINDMSMEPTPVVWIALLS 452
Query: 407 AYAMHGHGKEGIAHF 421
A H E +A F
Sbjct: 453 --ACRTHSNEELAEF 465
>gi|357156786|ref|XP_003577575.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 694
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 202/646 (31%), Positives = 318/646 (49%), Gaps = 93/646 (14%)
Query: 6 GSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV----- 60
G + DA+++F +P R+ VSWN+++ AC+ +G V +A + + M + D + L+
Sbjct: 56 GRIADARRLFDEIPRRNTVSWNAMIAACSDHGRVADARDLFDAMPARDGFSWTLMVSCYA 115
Query: 61 ----------------------SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLS 98
++A+I G+ ++G ++A+ +L M A P+ + +
Sbjct: 116 RAGELGLARDALDRMPGDKCTACYNAMISGYAKHGRFDDAVALLREMPA----PDIISWN 171
Query: 99 SVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIK 158
SVL R ++ +F + +S ++ G Y R GD+ SA +F+
Sbjct: 172 SVLVGLTRNGEMVRAVKFFDEMPARDMVSWNLMLEG----YVRAGDVDSAAGLFAGVPSP 227
Query: 159 NEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMF 218
N VS T++ GYC G + EARELFD++ R + +WN M+SGY+ S +EA+ +F
Sbjct: 228 NVVSWVTLLNGYCRAGRIGEARELFDRIP----DRNVAAWNVMLSGYLRLSHMEEAYKLF 283
Query: 219 RDLLMRDGIEPTSF--------------------TFGSVLIACADMNSLRKGKEIH-ALA 257
++ ++ I T+ F S A M+ + K I A
Sbjct: 284 TEMPDKNSISWTTMISALVRGGKLQEAKDLLDKMPFDSFAAKTALMHGYLQSKMIDDARL 343
Query: 258 IALGLQ-SDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE-----NLLGKMKEDG----- 306
I GL+ D ++ Y L A + F ++ N + ++ DG
Sbjct: 344 IFDGLEVRDAVCWNTMISGYVHCGMLDEAMVLFQQMPNKDMVSWNTMIAGYAHDGQMRKA 403
Query: 307 -------FEPNVYTWN--------------AMQLFSEMLSLDLTPDIYTVGIILSACSSL 345
+ N +WN A+Q F M D T LSAC+ L
Sbjct: 404 VGIFRKMNQRNTVSWNSVISGFVQNGLCVEALQHFVLMRRDAKRADWSTYACCLSACADL 463
Query: 346 ATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAML 405
A + G+Q H+ R GY D G AL+ YAKCG + AR + + PD+VS NA++
Sbjct: 464 AALHVGRQFHSLLARSGYIGDSFAGNALISAYAKCGRILEARQVFDEMPAPDIVSWNALI 523
Query: 406 TAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDV 464
YA +GHG E I+ FR + + RPD ++F+ LSAC HAG I G +FF+ M Y +
Sbjct: 524 DGYASNGHGTEAISVFREMEDNDVRPDEVTFVGVLSACSHAGLIDEGFDFFNSMTKDYAL 583
Query: 465 KPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAAD 524
+P +HY CMVDLL R+G L EA+E I+ + + P++ +WGA+LG C H N E Q+AA+
Sbjct: 584 RPVAEHYACMVDLLGRSGRLSEAFEIIQGMQVQPNAGVWGAMLGACRVHKNHELAQLAAE 643
Query: 525 RLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPG 570
+L ELEP+ T NYV+L+N+ A AG+W + R +K+R +HK+PG
Sbjct: 644 KLYELEPHKTSNYVLLSNITAEAGKWDEAQNMRVFIKERGVHKTPG 689
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 116/517 (22%), Positives = 194/517 (37%), Gaps = 120/517 (23%)
Query: 128 NPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQME 187
N N ++ R G + A ++F + +N VS N +I ++G VA+AR+LFD M
Sbjct: 41 NTVSYNAMLSALARHGRIADARRLFDEIPRRNTVSWNAMIAACSDHGRVADARDLFDAMP 100
Query: 188 ------------------HLGVQRGIIS----------WNSMISGYVDNSLYDEAFSMFR 219
LG+ R + +N+MISGY + +D+A ++ R
Sbjct: 101 ARDGFSWTLMVSCYARAGELGLARDALDRMPGDKCTACYNAMISGYAKHGRFDDAVALLR 160
Query: 220 DLLMRDGIEPTSFTFGSVL-------------IACADMNS--------LRKGKEIHALAI 258
++ D I S G + DM S +R G A +
Sbjct: 161 EMPAPDIISWNSVLVGLTRNGEMVRAVKFFDEMPARDMVSWNLMLEGYVRAGDVDSAAGL 220
Query: 259 ALGLQSDTFVGG-ALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAM 317
G+ S V L+ YCR + A+ FD I + + G+ + A
Sbjct: 221 FAGVPSPNVVSWVTLLNGYCRAGRIGEARELFDRIPDRNVAAWNVMLSGYLRLSHMEEAY 280
Query: 318 QLFSEMLSLDLTPDIYTVG--IILSACSSLATMERGKQV----------------HAYA- 358
+LF+EM PD ++ ++SA ++ K + H Y
Sbjct: 281 KLFTEM------PDKNSISWTTMISALVRGGKLQEAKDLLDKMPFDSFAAKTALMHGYLQ 334
Query: 359 ------IRCGYDS----DVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAY 408
R +D D ++ Y CG L A + ++++ D+VS N M+ Y
Sbjct: 335 SKMIDDARLIFDGLEVRDAVCWNTMISGYVHCGMLDEAMVLFQQMPNKDMVSWNTMIAGY 394
Query: 409 AMHGHGKEGIAHFRRI----------LASGF---------------------RPDHISFL 437
A G ++ + FR++ + SGF R D ++
Sbjct: 395 AHDGQMRKAVGIFRKMNQRNTVSWNSVISGFVQNGLCVEALQHFVLMRRDAKRADWSTYA 454
Query: 438 SALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMA 497
LSAC ++ G +F L+A ++ ++ G + EA + ++P A
Sbjct: 455 CCLSACADLAALHVGRQFHSLLARSGYIGDSFAGNALISAYAKCGRILEARQVFDEMP-A 513
Query: 498 PDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNT 534
PD V W AL+ G S+G+ G A E+E N+
Sbjct: 514 PDIVSWNALIDGYASNGH---GTEAISVFREMEDNDV 547
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 92/411 (22%), Positives = 167/411 (40%), Gaps = 71/411 (17%)
Query: 141 RCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNS 200
R G + +A ++F +N VS N ++ +G +A+AR LFD++ +R +SWN+
Sbjct: 23 RSGQLAAARRLFDSMPSRNTVSYNAMLSALARHGRIADARRLFDEIP----RRNTVSWNA 78
Query: 201 MISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIAL 260
MI+ D+ +A +F + RDG T ++++C +A A L
Sbjct: 79 MIAACSDHGRVADARDLFDAMPARDGFSWT------LMVSC------------YARAGEL 120
Query: 261 GLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWN----- 315
GL D + Y +++ ++ LL +M P++ +WN
Sbjct: 121 GLARDALDRMPGDKCTACYNAMISGYAKHGRFDDAVALLREMP----APDIISWNSVLVG 176
Query: 316 ---------AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDS- 365
A++ F EM + D+ + ++L + G A + G S
Sbjct: 177 LTRNGEMVRAVKFFDEMPARDMV----SWNLMLE-----GYVRAGDVDSAAGLFAGVPSP 227
Query: 366 DVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRIL 425
+V L++ Y + G + AR + RI ++ + N ML+ Y H +E F +
Sbjct: 228 NVVSWVTLLNGYCRAGRIGEARELFDRIPDRNVAAWNVMLSGYLRLSHMEEAYKLFTEM- 286
Query: 426 ASGFRPDH--ISFLSALSACVHAGSIKTGSEFFDLMAY--YDVKPSLKHYTCMVDLLSRA 481
PD IS+ + +SA V G ++ + D M + + K +L H ++ A
Sbjct: 287 -----PDKNSISWTTMISALVRGGKLQEAKDLLDKMPFDSFAAKTALMHGYLQSKMIDDA 341
Query: 482 GELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPN 532
+ + E D+V W ++ G V G L+ + L + PN
Sbjct: 342 RLIFDGLE-------VRDAVCWNTMISGYVHCGMLDEAMV----LFQQMPN 381
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 69/140 (49%), Gaps = 8/140 (5%)
Query: 378 AKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFL 437
A+ G L AR + + + + VS NAML+A A HG IA RR+ R + +S+
Sbjct: 22 ARSGQLAAARRLFDSMPSRNTVSYNAMLSALARHGR----IADARRLFDEIPRRNTVSWN 77
Query: 438 SALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMA 497
+ ++AC G + + FD M D +T MV +RAGELG A + + ++P
Sbjct: 78 AMIAACSDHGRVADARDLFDAMPARDGFS----WTLMVSCYARAGELGLARDALDRMPGD 133
Query: 498 PDSVMWGALLGGCVSHGNLE 517
+ + A++ G HG +
Sbjct: 134 KCTACYNAMISGYAKHGRFD 153
>gi|68611229|emb|CAE03043.3| OSJNBa0084A10.18 [Oryza sativa Japonica Group]
Length = 729
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 182/596 (30%), Positives = 299/596 (50%), Gaps = 62/596 (10%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y +CG + +A+++F +P+R+ VSWN++V+ A NG+V A E + M D+ VS
Sbjct: 106 YARCGRVAEARELFNRIPDRNVVSWNAMVSGYARNGMVKRARELFDMMPWRDD-----VS 160
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W +I G+ + + EA + M + P +++L L + + G +
Sbjct: 161 WLTMISGYIKRKHVREARELFDSMPS----PPTSVCNALLSGYVELGYMRAAEVLFGQMQ 216
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
NP N ++ Y R G M A ++F + K+ +S I+ GY +NG+V A +
Sbjct: 217 TR----NPVSWNVMITGYARAGSMGIAQRLFDEMPEKDVLSRTAIMRGYLQNGSVDAAWK 272
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
+F M H R ++WN+M+ G+V N D+A +F ++ RD I
Sbjct: 273 VFKDMPH----RDTVAWNTMMDGFVRNDRLDDALKLFSEMPDRDQIS------------- 315
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK 301
A+++ Y + D+ +A F N + +
Sbjct: 316 ---------------------------WNAILQGYVQQGDMDSANAWFRRAPNKDAISWN 348
Query: 302 MKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRC 361
G++ A+ L SEM+ L PD T+ +++S C+SL ++ GK VH +AI+
Sbjct: 349 TLISGYKDE----GALSLLSEMIRGGLKPDQATLSVVISICASLVSLGCGKMVHLWAIKT 404
Query: 362 GYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHF 421
G++ D + ++L+ MY+KCG + A ++ I D V+ NAM+ YA HG E + F
Sbjct: 405 GFEHDALVMSSLISMYSKCGLISEASQVFELILQRDTVTWNAMIATYAYHGLADEALKVF 464
Query: 422 RRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSR 480
+ +GFRPDH +FLS LSAC H G + G F M +++ P HY+CMVDLL R
Sbjct: 465 DMMTKAGFRPDHATFLSILSACAHKGYLYEGCYHFRSMQEDWNLVPRSDHYSCMVDLLGR 524
Query: 481 AGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVML 540
+G + +AY+F ++IP + W L C SHG ++ G+I A +++ P++ G Y +L
Sbjct: 525 SGFIHQAYDFTRRIPSDHRTTAWETLFSVCNSHGEIQLGEIIARNVLKARPSDGGMYTLL 584
Query: 541 ANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEI 596
+N++A WS A R MK+R + K GCSWIE + E+ F ++D +H E+I
Sbjct: 585 SNIYAAKEMWSSAASVRGFMKERGLKKETGCSWIELKGEVVTFSSNDSNHPLIEQI 640
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 90/414 (21%), Positives = 167/414 (40%), Gaps = 49/414 (11%)
Query: 128 NPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQME 187
N F N +V R + A K+F ++N VS ++ GY G VAEARELF+++
Sbjct: 64 NVFTWNCMVSGLIRNRMLAEARKVFDAMPVRNSVSWAALLTGYARCGRVAEARELFNRIP 123
Query: 188 HLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSL 247
R ++SWN+M+SGY N + A +F + RD + + G + +
Sbjct: 124 ----DRNVVSWNAMVSGYARNGMVKRARELFDMMPWRDDVSWLTMISGYI-----KRKHV 174
Query: 248 RKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGF 307
R+ +E+ + T V AL+ Y + AA++ F +++ + + G+
Sbjct: 175 REARELFDSMPS----PPTSVCNALLSGYVELGYMRAAEVLFGQMQTRNPVSWNVMITGY 230
Query: 308 EPNVYTWNAMQLFSEMLSLDLTPDIYTV------GIILSACSSLATMERGKQVHAYAIRC 361
A +LF EM D+ + G + +A M V +
Sbjct: 231 ARAGSMGIAQRLFDEMPEKDVLSRTAIMRGYLQNGSVDAAWKVFKDMPHRDTVAWNTMMD 290
Query: 362 GY-----------------DSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAM 404
G+ D D A++ Y + G + A ++R D +S N +
Sbjct: 291 GFVRNDRLDDALKLFSEMPDRDQISWNAILQGYVQQGDMDSANAWFRRAPNKDAISWNTL 350
Query: 405 LTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDV 464
++ Y G ++ ++ G +PD + +S C S+ G ++ + +
Sbjct: 351 ISGYKDEG----ALSLLSEMIRGGLKPDQATLSVVISICASLVSLGCGK----MVHLWAI 402
Query: 465 KPSLKH----YTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
K +H + ++ + S+ G + EA + + I + D+V W A++ HG
Sbjct: 403 KTGFEHDALVMSSLISMYSKCGLISEASQVFELI-LQRDTVTWNAMIATYAYHG 455
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG + +A +VF+++ +RD V+WN+++ A +GL EAL+ + M+ P+
Sbjct: 419 MYSKCGLISEASQVFELILQRDTVTWNAMIATYAYHGLADEALKVFDMMTKAGFR-PDHA 477
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE 88
++ +++ GY E MQ +
Sbjct: 478 TFLSILSACAHKGYLYEGCYHFRSMQED 505
>gi|242090705|ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
gi|241946470|gb|EES19615.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
Length = 878
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 190/612 (31%), Positives = 318/612 (51%), Gaps = 78/612 (12%)
Query: 6 GSLDDAKKVFKMMPERDCVS----WNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
G +D ++V + C S NS++ A GLV EA R+ ET ++VS
Sbjct: 219 GMVDLGRRVHAQSVKFGCCSTVFVCNSLMNMYAKCGLVEEA-----RVVFCGMETRDMVS 273
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W+ ++ G NG+D EA+ + ++ T ++V+ CA +++L L ++ H +
Sbjct: 274 WNTLMAGLVLNGHDLEALQLFHDSRSSITMLTQSTYATVIKLCANIKQLGLARQLHSSVL 333
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
+ GF S V+ L+D Y + G + +AL IF S
Sbjct: 334 KRGFHSYGNVMTALMDAYSKAGQLGNALDIFLLMS------------------------- 368
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
G Q ++SW +MI+G + N A ++F + DG+ P FT+ ++L A
Sbjct: 369 --------GSQN-VVSWTAMINGCIQNGDVPLAAALFSRM-REDGVAPNDFTYSTILTA- 417
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK 301
+ SL +IHA I + + VG AL+ Y + + A F I+
Sbjct: 418 -SVASLPP--QIHAQVIKTNYECTSIVGTALLASYSKLCNTEEALSIFKMID-------- 466
Query: 302 MKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSS-LA 346
+ +V +W+AM +F +M L P+ +T+ ++ AC+S A
Sbjct: 467 ------QKDVVSWSAMLTCYAQAGDSDGATNIFIKMTMHGLKPNEFTISSVIDACASPTA 520
Query: 347 TMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLT 406
++ G+Q HA +I+ + + +ALV MYA+ GS++ A+ ++R + DLVS N+ML+
Sbjct: 521 GVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIESAQCIFERQTDRDLVSWNSMLS 580
Query: 407 AYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVK 465
YA HG+ ++ + FR++ A G D ++FLS + C HAG ++ G +FD MA Y +
Sbjct: 581 GYAQHGYSQKALDVFRQMEAEGIEMDGVTFLSVIMGCAHAGLVEEGQRYFDSMARDYGIT 640
Query: 466 PSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADR 525
P+++HY CMVDL SRAG+L EA I+ + ++W LLG C H N+E G++AA++
Sbjct: 641 PTMEHYACMVDLYSRAGKLDEAMSLIEGMSFPAGPMVWRTLLGACKVHKNVELGKLAAEK 700
Query: 526 LIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRA 585
L+ LEP ++ YV+L+N+++ AG+W + R+ M +++ K GCSWI+ ++++H F A
Sbjct: 701 LLSLEPFDSATYVLLSNIYSAAGKWKEKDEVRKLMDTKKVKKEAGCSWIQIKNKVHSFIA 760
Query: 586 SDRSHDRSEEIY 597
SD+SH SE+IY
Sbjct: 761 SDKSHPLSEQIY 772
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 90/392 (22%), Positives = 175/392 (44%), Gaps = 35/392 (8%)
Query: 158 KNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYD----- 212
++ ++C+ + + AR+ FD++ H +D++L+D
Sbjct: 36 QSTLACSVPLENQTNLNDATGARQAFDEIPHRNT--------------LDHALFDHARRG 81
Query: 213 ---EAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGL-QSDTFV 268
+A F D+ G VL C + GK++H L I G + D V
Sbjct: 82 SVHQALDHFLDVHRCHGGRVGGGALVGVLKVCGSVPDRVLGKQLHGLCIRCGHDRGDVGV 141
Query: 269 GGALVEMYCRYQDLVAAQMAFD-----EIENIENLLGKMKEDGFEPNVYTWNAMQLFSEM 323
G +LV+MY ++ +V + F+ + +LL +DG +V M+LF M
Sbjct: 142 GTSLVDMYMKWHSVVDGRKVFEAMPKRNVVTWTSLLTGYIQDGALSDV-----MELFFRM 196
Query: 324 LSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSL 383
+ + P+ T +LS +S ++ G++VHA +++ G S V + +L++MYAKCG +
Sbjct: 197 RAEGVWPNSVTFASVLSVVASQGMVDLGRRVHAQSVKFGCCSTVFVCNSLMNMYAKCGLV 256
Query: 384 KHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSAC 443
+ AR+ + + T D+VS N ++ ++GH E + F +S ++ + + C
Sbjct: 257 EEARVVFCGMETRDMVSWNTLMAGLVLNGHDLEALQLFHDSRSSITMLTQSTYATVIKLC 316
Query: 444 VHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMW 503
+ + + + T ++D S+AG+LG A + + + + V W
Sbjct: 317 ANIKQLGLARQLHSSVLKRGFHSYGNVMTALMDAYSKAGQLGNALDIFLLMSGSQNVVSW 376
Query: 504 GALLGGCVSHGNLEFGQIAADRLIE--LEPNN 533
A++ GC+ +G++ R+ E + PN+
Sbjct: 377 TAMINGCIQNGDVPLAAALFSRMREDGVAPND 408
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/421 (24%), Positives = 179/421 (42%), Gaps = 59/421 (14%)
Query: 97 LSSVLPACARLQKLSLGKEFHGYITRNGF-MSNPFVVNGLVDVYRRCGDMLSALKIFSKF 155
L VL C + LGK+ HG R G + V LVD+Y +
Sbjct: 106 LVGVLKVCGSVPDRVLGKQLHGLCIRCGHDRGDVGVGTSLVDMYMKWH------------ 153
Query: 156 SIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAF 215
+V + R++F+ M +R +++W S+++GY+ + +
Sbjct: 154 -------------------SVVDGRKVFEAMP----KRNVVTWTSLLTGYIQDGALSDVM 190
Query: 216 SMFRDLLMR-DGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVE 274
+F MR +G+ P S TF SVL A + G+ +HA ++ G S FV +L+
Sbjct: 191 ELF--FRMRAEGVWPNSVTFASVLSVVASQGMVDLGRRVHAQSVKFGCCSTVFVCNSLMN 248
Query: 275 MYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYT 334
MY + + A++ F +E + + G N + A+QLF + S T
Sbjct: 249 MYAKCGLVEEARVVFCGMETRDMVSWNTLMAGLVLNGHDLEALQLFHDSRSSITMLTQST 308
Query: 335 VGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS 394
++ C+++ + +Q+H+ ++ G+ S ++ TAL+D Y+K G L +A + +S
Sbjct: 309 YATVIKLCANIKQLGLARQLHSSVLKRGFHSYGNVMTALMDAYSKAGQLGNALDIFLLMS 368
Query: 395 -TPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACV-------HA 446
+ ++VS AM+ +G A F R+ G P+ ++ + L+A V HA
Sbjct: 369 GSQNVVSWTAMINGCIQNGDVPLAAALFSRMREDGVAPNDFTYSTILTASVASLPPQIHA 428
Query: 447 GSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGAL 506
IKT E ++ T ++ S+ EA K I D V W A+
Sbjct: 429 QVIKTNYECTSIVG-----------TALLASYSKLCNTEEALSIFKMIDQ-KDVVSWSAM 476
Query: 507 L 507
L
Sbjct: 477 L 477
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 134/311 (43%), Gaps = 27/311 (8%)
Query: 249 KGKEIHALAIALGLQSDTFVGGAL-VEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGF 307
+GK ALA L +S + + ++ +E D A+ AFDEI + L + +
Sbjct: 20 RGKNAGALAPELAPKSQSTLACSVPLENQTNLNDATGARQAFDEIPHRNTLDHALFDHAR 79
Query: 308 EPNVYTWNAMQLFSEMLSLDLTPDIYT-----------VGIILSACSSLATMERGKQVHA 356
+V+ +LD D++ VG+ L C S+ GKQ+H
Sbjct: 80 RGSVHQ-----------ALDHFLDVHRCHGGRVGGGALVGV-LKVCGSVPDRVLGKQLHG 127
Query: 357 YAIRCGYD-SDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGK 415
IRCG+D DV +GT+LVDMY K S+ R ++ + ++V+ ++LT Y G
Sbjct: 128 LCIRCGHDRGDVGVGTSLVDMYMKWHSVVDGRKVFEAMPKRNVVTWTSLLTGYIQDGALS 187
Query: 416 EGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMV 475
+ + F R+ A G P+ ++F S LS G + G + ++ ++
Sbjct: 188 DVMELFFRMRAEGVWPNSVTFASVLSVVASQGMVDLGRRVHAQSVKFGCCSTVFVCNSLM 247
Query: 476 DLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG-NLEFGQIAADRLIELEPNNT 534
++ ++ G + EA + D V W L+ G V +G +LE Q+ D +
Sbjct: 248 NMYAKCGLVEEARVVFCGME-TRDMVSWNTLMAGLVLNGHDLEALQLFHDSRSSITMLTQ 306
Query: 535 GNYVMLANLFA 545
Y + L A
Sbjct: 307 STYATVIKLCA 317
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 72/173 (41%), Gaps = 37/173 (21%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY + GS++ A+ +F+ +RD VSWNS+++ A +G
Sbjct: 550 MYARKGSIESAQCIFERQTDRDLVSWNSMLSGYAQHG----------------------- 586
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
Y ++A+ + +M+AEG+E + T SV+ CA + G+ + +
Sbjct: 587 -------------YSQKALDVFRQMEAEGIEMDGVTFLSVIMGCAHAGLVEEGQRYFDSM 633
Query: 121 TRN-GFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCE 172
R+ G +VD+Y R G + A+ + S ++G C+
Sbjct: 634 ARDYGITPTMEHYACMVDLYSRAGKLDEAMSLIEGMSFPAGPMVWRTLLGACK 686
>gi|15227623|ref|NP_178437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216181|sp|Q9ZQ74.1|PP146_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g03380, mitochondrial; Flags: Precursor
gi|4335760|gb|AAD17437.1| unknown protein [Arabidopsis thaliana]
gi|330250600|gb|AEC05694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 689
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 188/579 (32%), Positives = 293/579 (50%), Gaps = 78/579 (13%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG + A KVF + R N+V
Sbjct: 185 MYAKCGEIKSAHKVFNDITLR------------------------------------NVV 208
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
W+++I G+ +N EE + + RM+ + N T +++ AC +L L GK FHG +
Sbjct: 209 CWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCL 268
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
++G + +V L+D+Y +CGD+ +A ++F++ S + V +IVGY NG+V EA
Sbjct: 269 VKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEAL 328
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LF +M+ GV+ I+P T SVL
Sbjct: 329 SLFQKMK--GVE----------------------------------IKPNCVTIASVLSG 352
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C + +L G+ +H L+I +G+ DT V ALV MY + A+ F E+E+ ++++
Sbjct: 353 CGLIENLELGRSVHGLSIKVGIW-DTNVANALVHMYAKCYQNRDAKYVF-EMESEKDIVA 410
Query: 301 -KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
GF N A+ LF M S +TP+ TV + SAC+SL ++ G +HAY++
Sbjct: 411 WNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSV 470
Query: 360 RCGY--DSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEG 417
+ G+ S VH+GTAL+D YAKCG + ARL + I + ++ +AM+ Y G
Sbjct: 471 KLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGS 530
Query: 418 IAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVD 476
+ F +L +P+ +F S LSAC H G + G ++F M Y+ PS KHYTCMVD
Sbjct: 531 LELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVD 590
Query: 477 LLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGN 536
+L+RAGEL +A + I+K+P+ PD +GA L GC H + G+I ++++L P++
Sbjct: 591 MLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASY 650
Query: 537 YVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIE 575
YV+++NL+A GRW+ R MK R + K G S +E
Sbjct: 651 YVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHSTME 689
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 111/461 (24%), Positives = 218/461 (47%), Gaps = 41/461 (8%)
Query: 57 PNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEF 116
P+ W ++ + N E + + + G + S L AC LQ L GK+
Sbjct: 105 PDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKI 164
Query: 117 HGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNV 176
H + + N V+ GL+D+Y +CG++ SA K+F+ +++N V ++I GY +N
Sbjct: 165 HCQLVKVPSFDN-VVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLC 223
Query: 177 AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGS 236
E LF++M +N L +E +T+G+
Sbjct: 224 EEGLVLFNRMRE------------------NNVLGNE------------------YTYGT 247
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
+++AC +++L +GK H + G++ + + +L++MY + D+ A+ F+E +++
Sbjct: 248 LIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVD 307
Query: 297 NLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHA 356
++ G+ N A+ LF +M +++ P+ T+ +LS C + +E G+ VH
Sbjct: 308 LVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHG 367
Query: 357 YAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKE 416
+I+ G D ++ ALV MYAKC + A+ ++ S D+V+ N++++ ++ +G E
Sbjct: 368 LSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHE 426
Query: 417 GIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEF--FDLMAYYDVKPSLKHYTCM 474
+ F R+ + P+ ++ S SAC GS+ GS + + + S+ T +
Sbjct: 427 ALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTAL 486
Query: 475 VDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
+D ++ G+ A I +++ W A++GG G+
Sbjct: 487 LDFYAKCGDPQSARLIFDTIE-EKNTITWSAMIGGYGKQGD 526
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 109/466 (23%), Positives = 196/466 (42%), Gaps = 66/466 (14%)
Query: 100 VLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKN 159
+L C + L ++ HG +T NG M + + LV +Y
Sbjct: 50 LLSKCTNIDSL---RQSHGVLTGNGLMGDISIATKLVSLYG------------------- 87
Query: 160 EVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFR 219
GY + +AR +FDQ+ + W M+ Y N E ++
Sbjct: 88 -------FFGYTK-----DARLVFDQIP----EPDFYLWKVMLRCYCLNKESVEVVKLY- 130
Query: 220 DLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRY 279
DLLM+ G F L AC ++ L GK+IH + + D V L++MY +
Sbjct: 131 DLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVP-SFDNVVLTGLLDMYAKC 189
Query: 280 QDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIIL 339
++ +A F++I + G+ N + LF+ M ++ + YT G ++
Sbjct: 190 GEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLI 249
Query: 340 SACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLV 399
AC+ L+ + +GK H ++ G + + T+L+DMY KCG + +AR + S DLV
Sbjct: 250 MACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLV 309
Query: 400 SQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSAC-----------VHAGS 448
AM+ Y +G E ++ F+++ +P+ ++ S LS C VH S
Sbjct: 310 MWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLS 369
Query: 449 IKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLG 508
IK G +D + +V + ++ + +A +++ ++ D V W +++
Sbjct: 370 IKVG--------IWDTNVA----NALVHMYAKCYQNRDA-KYVFEMESEKDIVAWNSIIS 416
Query: 509 GCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLA 554
G +G++ R+ + T N V +A+LF+ LA
Sbjct: 417 GFSQNGSIHEALFLFHRMN--SESVTPNGVTVASLFSACASLGSLA 460
>gi|357129337|ref|XP_003566320.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Brachypodium distachyon]
Length = 661
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 173/536 (32%), Positives = 272/536 (50%), Gaps = 42/536 (7%)
Query: 92 PNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKI 151
P+ L S L +C L + H +G +PFV + L+ Y R G +A +
Sbjct: 18 PDPHLLPSALKSCP---AQPLARALHAAAVVSGLAEDPFVASSLLHSYIRLGATGAARSV 74
Query: 152 FSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGY-VDNSL 210
F + KN V + +I GY G+ A L +QM GV+ +I+WN ++SG
Sbjct: 75 FDRMPEKNVVGWSALIAGYSARGDAEAAWGLLEQMRSAGVEPNVITWNGLVSGLNRSGRA 134
Query: 211 YDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGG 270
D ++ R + +G P + L A D+ + GK++H + G + D V
Sbjct: 135 LDAVTALVR--MHSEGFFPDATGVSCALSAVGDVKEVSVGKQVHGYVVKAGCRLDACVVT 192
Query: 271 ALVEMY--CRYQD-------------------LVAAQMAFDEIENIENLLGKMKEDGFEP 309
AL++MY C D LVA ++ L + G E
Sbjct: 193 ALIDMYGKCGRADEIVRVFHESSHMDVASCNALVAGLSRNAQVSEALLLFREFICRGVEL 252
Query: 310 NVYTWN--------------AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVH 355
NV +W A+ LF M S+ + P+ T+ +L A +++A + G+ H
Sbjct: 253 NVVSWTSIVACCVQNGRDLEAVDLFRTMQSIGVEPNSVTIPCVLPAFANVAALMHGRSAH 312
Query: 356 AYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGK 415
+++R G+ DV++G+ALVDMYAKCG +HAR + + + ++VS NAM+ YAMHG
Sbjct: 313 CFSLRKGFLHDVYVGSALVDMYAKCGKARHARTIFDAMPSRNVVSWNAMIGGYAMHGDAA 372
Query: 416 EGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCM 474
+ F + +PD ++F L AC AG + G +F+ M + + P ++HY CM
Sbjct: 373 NAVQLFCSMQKCKQKPDLVTFTCVLGACSQAGLTEEGRRYFNEMQQGHGISPRMEHYACM 432
Query: 475 VDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNT 534
V LL R+G+L EAY+ I ++P PDS +WG+LLG C +GN+ ++AA++L +LEP N
Sbjct: 433 VTLLGRSGKLDEAYDLINEMPFEPDSCIWGSLLGSCRVYGNVLLAEVAAEKLFQLEPGNA 492
Query: 535 GNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSH 590
GNYV+L+N++A W + R R +MK+ + K GCSWIE ++++H A D SH
Sbjct: 493 GNYVLLSNIYASKKMWDGVNRVRDEMKNMGLKKEKGCSWIEIKNKVHMLLAGDNSH 548
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 111/352 (31%), Positives = 185/352 (52%), Gaps = 2/352 (0%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y + G+ A+ VF MPE++ V W++++ +A G A LE+M S E PN+++
Sbjct: 62 YIRLGATGAARSVFDRMPEKNVVGWSALIAGYSARGDAEAAWGLLEQMRSAGVE-PNVIT 120
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W+ ++ G ++G +A+ L RM +EG P+A +S L A ++++S+GK+ HGY+
Sbjct: 121 WNGLVSGLNRSGRALDAVTALVRMHSEGFFPDATGVSCALSAVGDVKEVSVGKQVHGYVV 180
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
+ G + VV L+D+Y +CG +++F + S + SCN ++ G N V+EA
Sbjct: 181 KAGCRLDACVVTALIDMYGKCGRADEIVRVFHESSHMDVASCNALVAGLSRNAQVSEALL 240
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
LF + GV+ ++SW S+++ V N EA +FR + G+EP S T VL A
Sbjct: 241 LFREFICRGVELNVVSWTSIVACCVQNGRDLEAVDLFRT-MQSIGVEPNSVTIPCVLPAF 299
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK 301
A++ +L G+ H ++ G D +VG ALV+MY + A+ FD + + +
Sbjct: 300 ANVAALMHGRSAHCFSLRKGFLHDVYVGSALVDMYAKCGKARHARTIFDAMPSRNVVSWN 359
Query: 302 MKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ 353
G+ + NA+QLF M PD+ T +L ACS E G++
Sbjct: 360 AMIGGYAMHGDAANAVQLFCSMQKCKQKPDLVTFTCVLGACSQAGLTEEGRR 411
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/298 (30%), Positives = 148/298 (49%), Gaps = 8/298 (2%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKCG D+ +VF D S N++V + N V EAL E N+V
Sbjct: 197 MYGKCGRADEIVRVFHESSHMDVASCNALVAGLSRNAQVSEALLLFREFICRGVEL-NVV 255
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW++++ QNG D EA+ + MQ+ G+EPN+ T+ VLPA A + L G+ H +
Sbjct: 256 SWTSIVACCVQNGRDLEAVDLFRTMQSIGVEPNSVTIPCVLPAFANVAALMHGRSAHCFS 315
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R GF+ + +V + LVD+Y +CG A IF +N VS N +I GY +G+ A A
Sbjct: 316 LRKGFLHDVYVGSALVDMYAKCGKARHARTIFDAMPSRNVVSWNAMIGGYAMHGDAANAV 375
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+LF M+ + ++++ ++ L +E F ++ GI P + A
Sbjct: 376 QLFCSMQKCKQKPDLVTFTCVLGACSQAGLTEEGRRYFNEMQQGHGISPRMEHY-----A 430
Query: 241 CADMNSLRKGK--EIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
C R GK E + L + + D+ + G+L+ Y +++ A++A +++ +E
Sbjct: 431 CMVTLLGRSGKLDEAYDLINEMPFEPDSCIWGSLLGSCRVYGNVLLAEVAAEKLFQLE 488
>gi|147826737|emb|CAN70653.1| hypothetical protein VITISV_010023 [Vitis vinifera]
Length = 1301
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 185/598 (30%), Positives = 305/598 (51%), Gaps = 92/598 (15%)
Query: 3 GKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSW 62
+ G++ A++VF MP RD VSWNS++T NG E+ M T N+VSW
Sbjct: 58 ARAGNIGAARQVFDEMPHRDTVSWNSIITGYWKNGCFDESKRLFGLMP-----TKNVVSW 112
Query: 63 SAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITR 122
+++I G ++ +EA F R
Sbjct: 113 NSMIAGCIEDERIDEAWQY----------------------------------FQAMPQR 138
Query: 123 NGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAREL 182
N N +++GLV R + A ++F + +N +S ++ GY + G + +AR L
Sbjct: 139 NTASWNA-MISGLV----RYDRVEEASRLFEEMPRRNVISYTAMVDGYAKIGEIEQARAL 193
Query: 183 FDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACA 242
F+ M Q+ ++SW MISGYV+N +DEA ++F + ++ + T+ G
Sbjct: 194 FNCM----PQKNVVSWTVMISGYVENGKFDEAENLFEQMPDKNIVAMTAMITG------- 242
Query: 243 DMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKM 302
YC+ A++ FD+I +
Sbjct: 243 ---------------------------------YCKEGKTDKAKILFDQIPCRDLASWNA 269
Query: 303 KEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCG 362
G+ N A++L S+ML + + PD T+ +L+ACSSLA+++ G++ H ++ G
Sbjct: 270 MITGYAQNGSGEEALKLHSQMLKMGMQPDHSTLISVLTACSSLASLQEGRKTHVLVLKSG 329
Query: 363 YDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFR 422
Y+S + I AL+ MY KCGS+ + LA+++I PD+VS NAM+ A+A HG +A F
Sbjct: 330 YESRISICNALITMYCKCGSILDSELAFRQIDHPDVVSWNAMIAAFARHGFYDRALASFG 389
Query: 423 RILASGFRPDHISFLSALSACVHAGSIKTGSEFFD-LMAYYDVKPSLKHYTCMVDLLSRA 481
+ ++ PD I+FLS LSAC HAG + +F+ ++ Y + +H+ C+VD+LSR
Sbjct: 390 EMRSNRVEPDGITFLSLLSACGHAGKVHESLNWFNSMIXSYKIVXRPEHFACLVDILSRG 449
Query: 482 GELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLA 541
G++ +AY+ I+++P D +WGALL C H N++ G++AA +++ELEP N+G YV+L+
Sbjct: 450 GQVEKAYKIIQEMPFEADCGIWGALLAACHVHLNVKLGELAAKKIVELEPQNSGAYVVLS 509
Query: 542 NLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTI 599
N++A AG W ++ R R M+++ + K P SW+E +++H F D SH EI+ I
Sbjct: 510 NIYAAAGMWGEVTRVRGLMREQGVKKQPAYSWMEIDNKVHFFLGDDASHP---EIHRI 564
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 100/355 (28%), Positives = 174/355 (49%), Gaps = 46/355 (12%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y K G D++K++F +MP ++ VSWNS++ C + + EA + + M N S
Sbjct: 88 YWKNGCFDESKRLFGLMPTKNVVSWNSMIAGCIEDERIDEAWQYFQAMPQR-----NTAS 142
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W+A+I G + EEA + M N + ++++ A++ ++ + +
Sbjct: 143 WNAMISGLVRYDRVEEASRLFEEMPRR----NVISYTAMVDGYAKIGEIEQARALFNCMP 198
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
+ +S +++G V+ G A +F + KN V+ +I GYC+ G +A+
Sbjct: 199 QKNVVSWTVMISGYVE----NGKFDEAENLFEQMPDKNIVAMTAMITGYCKEGKTDKAKI 254
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
LFDQ+ R + SWN+MI+GY N +EA + +L + G++P T SVL AC
Sbjct: 255 LFDQIPC----RDLASWNAMITGYAQNGSGEEALKLHSQML-KMGMQPDHSTLISVLTAC 309
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK 301
+ + SL++G++ H L + G +S + AL+ MYC+ ++ +++AF +I++
Sbjct: 310 SSLASLQEGRKTHVLVLKSGYESRISICNALITMYCKCGSILDSELAFRQIDH------- 362
Query: 302 MKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSAC 342
P+V +WNAM F EM S + PD T +LSAC
Sbjct: 363 -------PDVVSWNAMIAAFARHGFYDRALASFGEMRSNRVEPDGITFLSLLSAC 410
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 61/156 (39%), Gaps = 37/156 (23%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGS+ D++ F+ + D VSWN+++ A
Sbjct: 343 MYCKCGSILDSELAFRQIDHPDVVSWNAMIAA---------------------------- 374
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKE-FHGY 119
F ++G+ + A+ M++ +EP+ T S+L AC K+ F+
Sbjct: 375 --------FARHGFYDRALASFGEMRSNRVEPDGITFLSLLSACGHAGKVHESLNWFNSM 426
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKF 155
I + P LVD+ R G + A KI +
Sbjct: 427 IXSYKIVXRPEHFACLVDILSRGGQVEKAYKIIQEM 462
>gi|413952892|gb|AFW85541.1| hypothetical protein ZEAMMB73_780855 [Zea mays]
Length = 787
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 181/551 (32%), Positives = 293/551 (53%), Gaps = 47/551 (8%)
Query: 56 TPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEG-LEPNARTLSSVLPACARLQKLSLGK 114
+P+ + W+ ++ G + EA+ RM G + P++ TL+S L A A +++G+
Sbjct: 177 SPDTILWNTLLAGLPGS----EALEAFVRMVDAGRVRPDSTTLASSLRAAAEASHMAMGR 232
Query: 115 EFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
HGY + G + VV GL+ +Y +CGDM SA
Sbjct: 233 CVHGYGVKCGLAEHEHVVTGLMSLYSKCGDMDSA-------------------------- 266
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTF 234
+ LFD+M++ ++++N++ISGY N + + + +F++L G P S T
Sbjct: 267 -----QFLFDRMDN----PDLVAYNALISGYSVNGMVESSVELFKEL-TASGWRPNSSTL 316
Query: 235 GSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI-- 292
+V+ + + +HA + L +D V AL +YCR D+ +A+ FD +
Sbjct: 317 VAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRLNDMESARSIFDAMLE 376
Query: 293 ENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGK 352
+ +E+ + G+ N T A+ LF M L++ P+ T+ LSAC+ L + GK
Sbjct: 377 KTMESWNAMI--SGYAQNGLTEMAVALFQLMQELNVQPNPITISSTLSACAHLGALSLGK 434
Query: 353 QVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHG 412
VH + + +V++ TAL+DMYAKCGS+ AR + R+ ++VS NAM++ Y +HG
Sbjct: 435 WVHRIISKEKLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMISGYGLHG 494
Query: 413 HGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHY 471
G E + ++ +L + P +FLS + AC H G + G + F +M Y + P ++H
Sbjct: 495 QGAEALKLYKDMLDARILPTSSTFLSVIYACSHGGLVDEGQKVFRVMTNEYRITPGIEHC 554
Query: 472 TCMVDLLSRAGELGEAYEFIKKIPM-APDSVMWGALLGGCVSHGNLEFGQIAADRLIELE 530
TCMVDLL RAG+L EA E I + P A +WGALLG C+ H N + ++A+ +L EL+
Sbjct: 555 TCMVDLLGRAGKLNEALELISEFPQSAIGPGVWGALLGACMVHKNSDLAKLASQKLFELD 614
Query: 531 PNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSH 590
N G YV+L+NL+ +S+ A RQ+ K R++ K+PGC+ IE D H F A D H
Sbjct: 615 SENAGYYVLLSNLYTSKKHYSEAAVVRQEAKTRKLVKTPGCTLIEIGDRPHVFMAGDHLH 674
Query: 591 DRSEEIYTIID 601
+SE IY+ ++
Sbjct: 675 PQSEAIYSYLE 685
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 161/338 (47%), Gaps = 9/338 (2%)
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
+AR++FD + I WN++++G + EA F ++ + P S T S
Sbjct: 167 DARKVFDTVP----SPDTILWNTLLAGLPGS----EALEAFVRMVDAGRVRPDSTTLASS 218
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
L A A+ + + G+ +H + GL V L+ +Y + D+ +AQ FD ++N +
Sbjct: 219 LRAAAEASHMAMGRCVHGYGVKCGLAEHEHVVTGLMSLYSKCGDMDSAQFLFDRMDNPDL 278
Query: 298 LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAY 357
+ G+ N ++++LF E+ + P+ T+ ++ S + +HA+
Sbjct: 279 VAYNALISGYSVNGMVESSVELFKELTASGWRPNSSTLVAVIPVYSPFGHELLARCLHAF 338
Query: 358 AIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEG 417
++ D+D + TAL +Y + ++ AR + + + S NAM++ YA +G +
Sbjct: 339 VVKARLDADALVSTALTTLYCRLNDMESARSIFDAMLEKTMESWNAMISGYAQNGLTEMA 398
Query: 418 IAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDL 477
+A F+ + +P+ I+ S LSAC H G++ G +++ ++ ++ T ++D+
Sbjct: 399 VALFQLMQELNVQPNPITISSTLSACAHLGALSLGKWVHRIISKEKLELNVYVMTALIDM 458
Query: 478 LSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
++ G + EA ++ + V W A++ G HG
Sbjct: 459 YAKCGSIAEARSIFDRMD-NKNVVSWNAMISGYGLHGQ 495
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 100/405 (24%), Positives = 159/405 (39%), Gaps = 109/405 (26%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KCG +D A+ +F M DN P+LV
Sbjct: 256 LYSKCGDMDSAQFLFDRM----------------------------------DN--PDLV 279
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+++A+I G++ NG E ++ + + A G PN+ TL +V+P + L + H ++
Sbjct: 280 AYNALISGYSVNGMVESSVELFKELTASGWRPNSSTLVAVIPVYSPFGHELLARCLHAFV 339
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ ++ V L +Y R DM SA IF K S N +I GY +NG A
Sbjct: 340 VKARLDADALVSTALTTLYCRLNDMESARSIFDAMLEKTMESWNAMISGYAQNGLTEMAV 399
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LF M+ L VQ P T S L A
Sbjct: 400 ALFQLMQELNVQ------------------------------------PNPITISSTLSA 423
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA + +L GK +H + L+ + +V AL++MY + + A+ FD ++N
Sbjct: 424 CAHLGALSLGKWVHRIISKEKLELNVYVMTALIDMYAKCGSIAEARSIFDRMDN------ 477
Query: 301 KMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSSLA 346
NV +WNAM +L+ +ML + P T ++ ACS
Sbjct: 478 --------KNVVSWNAMISGYGLHGQGAEALKLYKDMLDARILPTSSTFLSVIYACSHGG 529
Query: 347 TMERGKQV-----HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHA 386
++ G++V + Y I G + T +VD+ + G L A
Sbjct: 530 LVDEGQKVFRVMTNEYRITPGIEH----CTCMVDLLGRAGKLNEA 570
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/389 (23%), Positives = 173/389 (44%), Gaps = 56/389 (14%)
Query: 229 PTSFTFGSVLIACADMNSLR-----KGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLV 283
P SF+F + + S R + +H L++A G +DTFV AL ++Y +
Sbjct: 107 PDSFSFAFAATSLSSSCSSRGNDAAAARTLHGLSVAAGYAADTFVASALAKLYFKLSRGD 166
Query: 284 AAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLD-LTPDIYTVGIILSAC 342
A+ FD + + + +L G + A++ F M+ + PD T+ L A
Sbjct: 167 DARKVFDTVPSPDTILWNTLLAGLPGS----EALEAFVRMVDAGRVRPDSTTLASSLRAA 222
Query: 343 SSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQN 402
+ + M G+ VH Y ++CG H+ T L+ +Y+KCG + A+ + R+ PDLV+ N
Sbjct: 223 AEASHMAMGRCVHGYGVKCGLAEHEHVVTGLMSLYSKCGDMDSAQFLFDRMDNPDLVAYN 282
Query: 403 AMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSA-----------LSACVHAGSIK- 450
A+++ Y+++G + + F+ + ASG+RP+ + ++ L+ C+HA +K
Sbjct: 283 ALISGYSVNGMVESSVELFKELTASGWRPNSSTLVAVIPVYSPFGHELLARCLHAFVVKA 342
Query: 451 -----------------------TGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAG--ELG 485
+ FD M ++ +++ + M+ ++ G E+
Sbjct: 343 RLDADALVSTALTTLYCRLNDMESARSIFDAM----LEKTMESWNAMISGYAQNGLTEMA 398
Query: 486 EA-YEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLF 544
A ++ ++++ + P+ + + L C G L G+ R+I E YVM A +
Sbjct: 399 VALFQLMQELNVQPNPITISSTLSACAHLGALSLGKW-VHRIISKEKLELNVYVMTALID 457
Query: 545 AYAGRWSDLARTRQKMKDRRMHKSPGCSW 573
YA + +A R RM SW
Sbjct: 458 MYA-KCGSIAEARSIFD--RMDNKNVVSW 483
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 68/157 (43%), Gaps = 39/157 (24%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGS+ +A+ +F M DN+ N+V
Sbjct: 458 MYAKCGSIAEARSIFDRM----------------------------------DNK--NVV 481
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A+I G+ +G EA+ + M + P + T SV+ AC+ + G++ +
Sbjct: 482 SWNAMISGYGLHGQGAEALKLYKDMLDARILPTSSTFLSVIYACSHGGLVDEGQKVFRVM 541
Query: 121 TRNGFMSNPFV--VNGLVDVYRRCGDMLSALKIFSKF 155
T N + P + +VD+ R G + AL++ S+F
Sbjct: 542 T-NEYRITPGIEHCTCMVDLLGRAGKLNEALELISEF 577
>gi|115482524|ref|NP_001064855.1| Os10g0477200 [Oryza sativa Japonica Group]
gi|110289259|gb|AAP54276.2| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
gi|110289260|gb|ABG66139.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
gi|113639464|dbj|BAF26769.1| Os10g0477200 [Oryza sativa Japonica Group]
gi|215695099|dbj|BAG90290.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 699
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 189/605 (31%), Positives = 292/605 (48%), Gaps = 78/605 (12%)
Query: 57 PNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEF 116
P + SW+ +I G QN +EA+ + M E P+A T++S+LPAC L L +GK+
Sbjct: 8 PGVNSWNCIISGCVQNARYDEALNIFCEM-CESESPDAVTVASILPACTGLMALGIGKQL 66
Query: 117 HGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNV 176
H Y+ R G N ++ + L+ +Y CG+ A +F+ KN N +I Y +
Sbjct: 67 HSYVIRCGIKLNVYIGSSLIGMYSECGEFGYARSVFAAIEEKNATVWNELIRSYINEERM 126
Query: 177 AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDL--------------- 221
EA E F M+ G+Q I++NS I+ Y ++A+++ ++
Sbjct: 127 NEAWEAFRLMKENGLQPDTITYNSFIAAYARAGQKEQAYTLLSNMVEIGLKPNVVSMNAL 186
Query: 222 --------------------------------LMRDGIEPTSFTFGSVLIACADMNSLRK 249
L + I+P T SVL D+ R
Sbjct: 187 ISGLHHHGRHADALEAFRYMQVSSDGEAKGWALPGNSIQPNGTTITSVLSLLTDLRLDRL 246
Query: 250 GKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEP 309
GKE+H A GL S+ FV LV++Y + D+ A F I N
Sbjct: 247 GKEVHCYAFRSGLISNIFVSSKLVDLYGKTGDVGTADKVFRRISN--------------K 292
Query: 310 NVYTWN--------------AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVH 355
NV TWN A++LF EM+ +L P++ T+ I L + ++ G+++H
Sbjct: 293 NVVTWNSILASYRQNRKPEIALKLFHEMIKSNLLPNLVTLQIALLSSGMTMALQHGRELH 352
Query: 356 AYAIRCGYDS-DVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHG 414
Y + D + +AL+DMY KCG ++ ARL ++ D+ + NA+++AY +H
Sbjct: 353 GYIRKNWPDGYPTALASALIDMYGKCGKIEDARLVFECTDEKDIATWNAIMSAYLLHRIP 412
Query: 415 KEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTC 473
E F+ I SG +PD ++F+ LSAC GS++ +F M Y ++P+LKHYTC
Sbjct: 413 GEVKKLFKYIEQSGIQPDPVTFIILLSACKQEGSMEEARRYFYSMEDVYGIQPTLKHYTC 472
Query: 474 MVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNN 533
MVD++ AG L E+ E I+K+ + PD +W LL C H NLE G+ AA L ELEPNN
Sbjct: 473 MVDIMGMAGLLEESLELIQKMQLEPDGCLWSILLKACKLHSNLEIGEKAAKALFELEPNN 532
Query: 534 TGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRS 593
T NY+ L+N++A G W R M ++ ++ CS + ++H F A D SH
Sbjct: 533 TSNYMSLSNIYADNGLWESTEALRVAMTEQGLNVERQCSRLYLGTDVHTFEAGDSSHPAF 592
Query: 594 EEIYT 598
E+I +
Sbjct: 593 EKILS 597
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 110/506 (21%), Positives = 207/506 (40%), Gaps = 130/506 (25%)
Query: 190 GVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRK 249
GV+ G+ SWN +ISG V N+ YDEA ++F + M + P + T S+L AC + +L
Sbjct: 5 GVKPGVNSWNCIISGCVQNARYDEALNIFCE--MCESESPDAVTVASILPACTGLMALGI 62
Query: 250 GKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE----NIENLLGK---- 301
GK++H+ I G++ + ++G +L+ MY + A+ F IE + N L +
Sbjct: 63 GKQLHSYVIRCGIKLNVYIGSSLIGMYSECGEFGYARSVFAAIEEKNATVWNELIRSYIN 122
Query: 302 -------------MKEDGFEPNVYTWN--------------AMQLFSEMLSLDLTPDIY- 333
MKE+G +P+ T+N A L S M+ + L P++
Sbjct: 123 EERMNEAWEAFRLMKENGLQPDTITYNSFIAAYARAGQKEQAYTLLSNMVEIGLKPNVVS 182
Query: 334 -----------------------------------------------TVGIILSACSSLA 346
T+ +LS + L
Sbjct: 183 MNALISGLHHHGRHADALEAFRYMQVSSDGEAKGWALPGNSIQPNGTTITSVLSLLTDLR 242
Query: 347 TMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLT 406
GK+VH YA R G S++ + + LVD+Y K G + A ++RIS ++V+ N++L
Sbjct: 243 LDRLGKEVHCYAFRSGLISNIFVSSKLVDLYGKTGDVGTADKVFRRISNKNVVTWNSILA 302
Query: 407 AYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA--YYDV 464
+Y + + + F ++ S P+ ++ AL + +++ G E + + D
Sbjct: 303 SYRQNRKPEIALKLFHEMIKSNLLPNLVTLQIALLSSGMTMALQHGRELHGYIRKNWPDG 362
Query: 465 KPSLKHYTCMVDLLSRAGELGEA----------------------------------YEF 490
P+ + ++D+ + G++ +A +++
Sbjct: 363 YPT-ALASALIDMYGKCGKIEDARLVFECTDEKDIATWNAIMSAYLLHRIPGEVKKLFKY 421
Query: 491 IKKIPMAPDSVMWGALLGGCVSHGNLEFGQ---IAADRLIELEPNNTGNYVMLANLFAYA 547
I++ + PD V + LL C G++E + + + + ++P +Y + ++ A
Sbjct: 422 IEQSGIQPDPVTFIILLSACKQEGSMEEARRYFYSMEDVYGIQP-TLKHYTCMVDIMGMA 480
Query: 548 GRWSDLARTRQKMKDRRMHKSPGCSW 573
G + QKM+ + GC W
Sbjct: 481 GLLEESLELIQKMQ----LEPDGCLW 502
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 114/478 (23%), Positives = 193/478 (40%), Gaps = 116/478 (24%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERM--SSLDNET-- 56
MY +CG A+ VF + E++ WN ++ + + EA E M + L +T
Sbjct: 88 MYSECGEFGYARSVFAAIEEKNATVWNELIRSYINEERMNEAWEAFRLMKENGLQPDTIT 147
Query: 57 ------------------------------PNLVSWSAVIGGFTQNGYDEEAIGMLFRMQ 86
PN+VS +A+I G +G +A+ MQ
Sbjct: 148 YNSFIAAYARAGQKEQAYTLLSNMVEIGLKPNVVSMNALISGLHHHGRHADALEAFRYMQ 207
Query: 87 ------AEG-------LEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVN 133
A+G ++PN T++SVL L+ LGKE H Y R+G +SN FV +
Sbjct: 208 VSSDGEAKGWALPGNSIQPNGTTITSVLSLLTDLRLDRLGKEVHCYAFRSGLISNIFVSS 267
Query: 134 GLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQR 193
LVD+Y + GD+ +A K+F + S KN V+ N+I+ Y +N A +LF +M
Sbjct: 268 KLVDLYGKTGDVGTADKVFRRISNKNVVTWNSILASYRQNRKPEIALKLFHEM------- 320
Query: 194 GIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEI 253
++ + P T L++ +L+ G+E+
Sbjct: 321 -----------------------------IKSNLLPNLVTLQIALLSSGMTMALQHGREL 351
Query: 254 HA-LAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVY 312
H + T + AL++MY + + A++ F+ + E ++
Sbjct: 352 HGYIRKNWPDGYPTALASALIDMYGKCGKIEDARLVFECTD--------------EKDIA 397
Query: 313 TWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYA 358
TWNA+ +LF + + PD T I+LSAC +ME ++ + Y+
Sbjct: 398 TWNAIMSAYLLHRIPGEVKKLFKYIEQSGIQPDPVTFIILLSACKQEGSMEEARR-YFYS 456
Query: 359 IR--CGYDSDVHIGTALVDMYAKCGSLKHA-RLAYKRISTPDLVSQNAMLTAYAMHGH 413
+ G + T +VD+ G L+ + L K PD + +L A +H +
Sbjct: 457 MEDVYGIQPTLKHYTCMVDIMGMAGLLEESLELIQKMQLEPDGCLWSILLKACKLHSN 514
>gi|255568474|ref|XP_002525211.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535508|gb|EEF37177.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 654
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 188/632 (29%), Positives = 309/632 (48%), Gaps = 102/632 (16%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y K L A+ VF +P ++ S+N+++ + + + +AL+ ++S NLV
Sbjct: 68 LYSKTNHLAFARYVFDQIPHKNTFSYNAMLISYSLHNRHGDALDLFSSLAS-----SNLV 122
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+ +I L + +LSS L + LGKE HG++
Sbjct: 123 --------------NNISITCLLK-----------SLSSF-----TLSDVKLGKEVHGFV 152
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R GF ++ FV N L+ Y +C D+ +R
Sbjct: 153 LRTGFDADVFVENALITYYSKCYDL-------------------------------DLSR 181
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
++FD+M +R ++SWNSMISGY LY++ +++R+++ G P T SVL A
Sbjct: 182 KVFDRM----TKRDVVSWNSMISGYSQGGLYEDCKTLYREMVDFSGFRPNGVTVVSVLQA 237
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C L G E+H + ++ D V AL+ +Y + L A+ FDE+ + +
Sbjct: 238 CGQTQDLAFGMEVHKFIVDNQVEIDISVCNALIGLYAKCGSLDYARELFDEMSEKDEVTY 297
Query: 301 KMKEDGFEPNVY-----------------TWNA--------------MQLFSEMLSLDLT 329
G + Y TWNA + L EM +L
Sbjct: 298 GAIISGLMLHGYVDQSLELFRGMKTQILSTWNAVITGLVQNNRHEGVLDLVREMQALGFR 357
Query: 330 PDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLA 389
P+ T+ +LS + ++++ GK++H+YAI+ GY ++++ TA++DMYAK G L+ A+
Sbjct: 358 PNAVTLSSVLSTIAYFSSLKGGKEIHSYAIKIGYHRNIYVATAIIDMYAKSGYLRGAQRV 417
Query: 390 YKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSI 449
+ + LV A+++AYA+HG + F +L G +PD ++F + L+AC H G +
Sbjct: 418 FDQSKDRSLVIWTAIISAYAVHGDANLALGLFHEMLKQGIQPDPVTFTAVLAACAHCGMV 477
Query: 450 KTGSEFFDLM-AYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLG 508
E F+ M Y ++P ++HY C+V L +A L EA EF+ K+P+ P + +WGALL
Sbjct: 478 DKAWEIFESMFKKYGIQPLVEHYACVVGALGKARRLSEAKEFVSKMPIEPSAKVWGALLH 537
Query: 509 GCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKS 568
G ++E G+ D L E+EP NTGNYV++ANL++ AGRW + R++M + K
Sbjct: 538 GASISSDVELGKSVCDYLFEIEPENTGNYVIMANLYSQAGRWKEADEVRERMNKVGLQKI 597
Query: 569 PGCSWIEDRDEIHKFRASDRSHDRSEEIYTII 600
PG SWIE + + F A+D + EEI+ I+
Sbjct: 598 PGSSWIETSEGLRSFIATDTCTENVEEIHVIL 629
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/400 (23%), Positives = 176/400 (44%), Gaps = 40/400 (10%)
Query: 155 FSIKNEVSCNTIIVG-YCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDE 213
FS+ E + +V Y + ++A AR +FDQ+ H + S+N+M+ Y ++ + +
Sbjct: 53 FSVTPENYLASKLVALYSKTNHLAFARYVFDQIPH----KNTFSYNAMLISYSLHNRHGD 108
Query: 214 AFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALV 273
A +F L + + S T ++ ++ ++ GKE+H + G +D FV AL+
Sbjct: 109 ALDLFSSLASSNLVNNISITCLLKSLSSFTLSDVKLGKEVHGFVLRTGFDADVFVENALI 168
Query: 274 EMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLD-LTPDI 332
Y + DL ++ FD + + + G+ + L+ EM+ P+
Sbjct: 169 TYYSKCYDLDLSRKVFDRMTKRDVVSWNSMISGYSQGGLYEDCKTLYREMVDFSGFRPNG 228
Query: 333 YTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKR 392
TV +L AC + G +VH + + + D+ + AL+ +YAKCGSL +AR +
Sbjct: 229 VTVVSVLQACGQTQDLAFGMEVHKFIVDNQVEIDISVCNALIGLYAKCGSLDYARELFDE 288
Query: 393 ISTPDLVSQNAMLTAYAMHGHGKEGIAHFR----RILAS--------------------- 427
+S D V+ A+++ +HG+ + + FR +IL++
Sbjct: 289 MSEKDEVTYGAIISGLMLHGYVDQSLELFRGMKTQILSTWNAVITGLVQNNRHEGVLDLV 348
Query: 428 ------GFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRA 481
GFRP+ ++ S LS + S+K G E ++ T ++D+ +++
Sbjct: 349 REMQALGFRPNAVTLSSVLSTIAYFSSLKGGKEIHSYAIKIGYHRNIYVATAIIDMYAKS 408
Query: 482 GELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG--NLEFG 519
G L A + V+W A++ HG NL G
Sbjct: 409 GYLRGAQRVFDQ-SKDRSLVIWTAIISAYAVHGDANLALG 447
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 144/286 (50%), Gaps = 3/286 (1%)
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
+G +L ++ + K++HA I + + ++ LV +Y + L A+ FD+I
Sbjct: 27 YGHLLHHLTELRLPLQAKQLHARLILFSVTPENYLASKLVALYSKTNHLAFARYVFDQIP 86
Query: 294 NIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACS-SLATMERGK 352
+ + + +A+ LFS + S +L +I ++ S S +L+ ++ GK
Sbjct: 87 HKNTFSYNAMLISYSLHNRHGDALDLFSSLASSNLVNNISITCLLKSLSSFTLSDVKLGK 146
Query: 353 QVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHG 412
+VH + +R G+D+DV + AL+ Y+KC L +R + R++ D+VS N+M++ Y+ G
Sbjct: 147 EVHGFVLRTGFDADVFVENALITYYSKCYDLDLSRKVFDRMTKRDVVSWNSMISGYSQGG 206
Query: 413 HGKEGIAHFRRILA-SGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHY 471
++ +R ++ SGFRP+ ++ +S L AC + G E + V+ +
Sbjct: 207 LYEDCKTLYREMVDFSGFRPNGVTVVSVLQACGQTQDLAFGMEVHKFIVDNQVEIDISVC 266
Query: 472 TCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
++ L ++ G L A E ++ D V +GA++ G + HG ++
Sbjct: 267 NALIGLYAKCGSLDYARELFDEMS-EKDEVTYGAIISGLMLHGYVD 311
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 99/227 (43%), Gaps = 17/227 (7%)
Query: 336 GIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST 395
G +L + L + KQ+HA I + ++ + LV +Y+K L AR + +I
Sbjct: 28 GHLLHHLTELRLPLQAKQLHARLILFSVTPENYLASKLVALYSKTNHLAFARYVFDQIPH 87
Query: 396 PDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHIS---FLSALSACVHAGSIKTG 452
+ S NAML +Y++H + + F LAS ++IS L +LS+ +K G
Sbjct: 88 KNTFSYNAMLISYSLHNRHGDALDLFSS-LASSNLVNNISITCLLKSLSSFT-LSDVKLG 145
Query: 453 SEF--FDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGC 510
E F L +D +++ ++ S+ +L + + ++ D V W +++ G
Sbjct: 146 KEVHGFVLRTGFDADVFVEN--ALITYYSKCYDLDLSRKVFDRMT-KRDVVSWNSMISGY 202
Query: 511 VSHGNLEFGQIAADRLIE---LEPNNTGNYVMLANLFAYAGRWSDLA 554
G E + +++ PN V + ++ G+ DLA
Sbjct: 203 SQGGLYEDCKTLYREMVDFSGFRPNG----VTVVSVLQACGQTQDLA 245
>gi|224080081|ref|XP_002306009.1| predicted protein [Populus trichocarpa]
gi|222848973|gb|EEE86520.1| predicted protein [Populus trichocarpa]
Length = 870
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 193/619 (31%), Positives = 309/619 (49%), Gaps = 82/619 (13%)
Query: 22 DCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGM 81
D WN++V+ G V EA RM E +LVSW+A+I G+ NG +A+ +
Sbjct: 270 DVFVWNALVSFYLRVGRVEEAELLFRRM-----ELRDLVSWNAIIAGYASNGEWSKALEL 324
Query: 82 LFRM-QAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFM-SNPFVVNGLVDVY 139
+ + +EP++ TL ++PACA+ + L +GK HGY+ R+ + + V N LV Y
Sbjct: 325 FHELLTLDMIEPDSVTLLCIIPACAQSRNLHVGKMIHGYVLRHPLLCEDTSVGNALVSFY 384
Query: 140 RRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWN 199
+C D+ A + F S +R +ISWN
Sbjct: 385 AKCDDIEGAYETFFMIS-----------------------------------RRDLISWN 409
Query: 200 SMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIA 259
SM+ V++ Y+ F ++ +G P S T SV+ C ++ K KE H+ +I
Sbjct: 410 SMLDALVESG-YNTWFLELLRWMLSEGTTPDSVTILSVVHFCVNVLKEDKVKEAHSYSIR 468
Query: 260 LGLQSDTF-----VGGALVEMYCRYQDLVAAQMAFDEIENIENLL------------GKM 302
L + F +G A+++ Y + ++ A F + NL+ G +
Sbjct: 469 HRLLASKFDVEPTIGNAILDAYAKCGNIEYASKVFQSLSENRNLVTFKAIISGYINCGLL 528
Query: 303 KEDGFEPN------VYTWN--------------AMQLFSEMLSLDLTPDIYTVGIILSAC 342
E N + WN A+ LF E+ + + PD T+ +L AC
Sbjct: 529 DEAYITFNRMPSSDLSVWNLMVRLYAENDCSSQALGLFHELQAHGIKPDAVTIMSLLPAC 588
Query: 343 SSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQN 402
+ +A+++ KQ H YAIR + D+H+ AL D+YAKCGS+ +A ++ I DL+
Sbjct: 589 AEMASVQLIKQCHGYAIRSCF-GDLHLDGALQDVYAKCGSIGYAFKLFQLIPNKDLIIFT 647
Query: 403 AMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTG-SEFFDLMAY 461
AM+ YAMHG GKE + F ++ G +PDH+ + LSAC HAG + G + F+ +
Sbjct: 648 AMIRGYAMHGMGKEALGTFFHMIELGIKPDHVIITTVLSACSHAGLVDEGLNIFYSIEKV 707
Query: 462 YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQI 521
+ +K +++ Y+C+VDLL+R G + +A+ + +P+ ++ +WG LLG C +H +E G+
Sbjct: 708 HGMKLTMEQYSCVVDLLARGGRIDDAFSMVTGMPIEANANIWGTLLGACRTHHEVELGRF 767
Query: 522 AADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIH 581
ADRL ++E N GNYV+L+NL+A RW + R+ M+ R + K GCSWIE +
Sbjct: 768 VADRLFKIEAENIGNYVVLSNLYAADARWDGVMEIRKLMRTRDLKKPAGCSWIEVERRKN 827
Query: 582 KFRASDRSHDRSEEIYTII 600
F A D SH +IY I+
Sbjct: 828 VFVAGDTSHPHRIDIYRIL 846
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 147/536 (27%), Positives = 241/536 (44%), Gaps = 95/536 (17%)
Query: 27 NSVVTACAANGLVLEALECLERMSSLDN-ETPNLVSWSAVIGGFTQNGYDEEAIGMLFRM 85
N++V+ A GLV C + ++ D+ + ++VSW+A+I GF +N E+A + M
Sbjct: 169 NALVSMYAKCGLV-----CQDAYAAFDSIDEKDVVSWNAIISGFAENNLMEDAFRLFSSM 223
Query: 86 QAEGLEPNARTLSSVLPACARLQKLS---LGKEFHGYITR-NGFMSNPFVVNGLVDVYRR 141
++PN TL+++LP CA + GKE HGY+ R N +++ FV N LV Y R
Sbjct: 224 LKGQIKPNYTTLANILPVCASFDEYIAYWFGKEIHGYVLRHNELLADVFVWNALVSFYLR 283
Query: 142 CGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSM 201
G + A +F + +++ VS N II GY NG ++A EL
Sbjct: 284 VGRVEEAELLFRRMELRDLVSWNAIIAGYASNGEWSKALEL------------------- 324
Query: 202 ISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALG 261
F +LL D IEP S T ++ ACA +L GK IH +
Sbjct: 325 ----------------FHELLTLDMIEPDSVTLLCIIPACAQSRNLHVGKMIHGYVLRHP 368
Query: 262 LQ-SDTFVGGALVEMYCRYQDLVAAQMAFDEIE-----NIENLLGKMKEDGFEPNVYTWN 315
L DT VG ALV Y + D+ A F I + ++L + E G+ TW
Sbjct: 369 LLCEDTSVGNALVSFYAKCDDIEGAYETFFMISRRDLISWNSMLDALVESGYN----TW- 423
Query: 316 AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR-----CGYDSDVHIG 370
++L MLS TPD T+ ++ C ++ ++ K+ H+Y+IR +D + IG
Sbjct: 424 FLELLRWMLSEGTTPDSVTILSVVHFCVNVLKEDKVKEAHSYSIRHRLLASKFDVEPTIG 483
Query: 371 TALVDMYAKCGSLKHAR--------------------------------LAYKRISTPDL 398
A++D YAKCG++++A + + R+ + DL
Sbjct: 484 NAILDAYAKCGNIEYASKVFQSLSENRNLVTFKAIISGYINCGLLDEAYITFNRMPSSDL 543
Query: 399 VSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDL 458
N M+ YA + + + F + A G +PD ++ +S L AC S++ +
Sbjct: 544 SVWNLMVRLYAENDCSSQALGLFHELQAHGIKPDAVTIMSLLPACAEMASVQLIKQCHG- 602
Query: 459 MAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
A L + D+ ++ G +G A++ + IP D +++ A++ G HG
Sbjct: 603 YAIRSCFGDLHLDGALQDVYAKCGSIGYAFKLFQLIP-NKDLIIFTAMIRGYAMHG 657
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 142/547 (25%), Positives = 242/547 (44%), Gaps = 97/547 (17%)
Query: 1 MYGKCGSLDDAKKVFKMM---PERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETP 57
MY KCG+LD++KK+F + +RD + WN +++ A + +
Sbjct: 68 MYAKCGALDESKKLFGEIGSCNDRDPIFWNILLSGYAGSRV------------------- 108
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQ-AEGLEPNARTLSSVLPACARLQKLSLGKEF 116
YD E + + M A +P++ T + VLP CARL + +G+
Sbjct: 109 ----------------YDAETLRLFREMHGANYPKPSSVTAAIVLPVCARLGDVYMGRSV 152
Query: 117 HGYITRNGFMSNPFVVNGLVDVYRRCGDMLS-ALKIFSKFSIKNEVSCNTIIVGYCENGN 175
+ Y ++G ++ N LV +Y +CG + A F K+ VS N II G+ EN
Sbjct: 153 NCYAIKSGLDTHTLAGNALVSMYAKCGLVCQDAYAAFDSIDEKDVVSWNAIISGFAEN-- 210
Query: 176 VAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFG 235
+L ++AF +F +L + I+P T
Sbjct: 211 ---------------------------------NLMEDAFRLFSSML-KGQIKPNYTTLA 236
Query: 236 SVLIACADMNSLRK---GKEIHALAIALG-LQSDTFVGGALVEMYCRYQDLVAAQMAFDE 291
++L CA + GKEIH + L +D FV ALV Y R + A++ F
Sbjct: 237 NILPVCASFDEYIAYWFGKEIHGYVLRHNELLADVFVWNALVSFYLRVGRVEEAELLFRR 296
Query: 292 IENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLT-PDIYTVGIILSACSSLATMER 350
+E + + G+ N A++LF E+L+LD+ PD T+ I+ AC+ +
Sbjct: 297 MELRDLVSWNAIIAGYASNGEWSKALELFHELLTLDMIEPDSVTLLCIIPACAQSRNLHV 356
Query: 351 GKQVHAYAIR----CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLT 406
GK +H Y +R C D +G ALV YAKC ++ A + IS DL+S N+ML
Sbjct: 357 GKMIHGYVLRHPLLC---EDTSVGNALVSFYAKCDDIEGAYETFFMISRRDLISWNSMLD 413
Query: 407 AYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHA---GSIKTGSEFFD----LM 459
A G+ + R +L+ G PD ++ LS + CV+ +K + L
Sbjct: 414 ALVESGYNTWFLELLRWMLSEGTTPDSVTILSVVHFCVNVLKEDKVKEAHSYSIRHRLLA 473
Query: 460 AYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFG 519
+ +DV+P++ + ++D ++ G + A + + + + V + A++ G ++ G L+
Sbjct: 474 SKFDVEPTIGN--AILDAYAKCGNIEYASKVFQSLSENRNLVTFKAIISGYINCGLLDEA 531
Query: 520 QIAADRL 526
I +R+
Sbjct: 532 YITFNRM 538
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 121/434 (27%), Positives = 195/434 (44%), Gaps = 53/434 (12%)
Query: 95 RTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSK 154
+ ++S+L +CA L + G+ HG I R G +S V L+++Y +CG + + K+F +
Sbjct: 25 QAVASILKSCAGLSAIKWGRALHGSIVRIGHVSCHAVSKALLNMYAKCGALDESKKLFGE 84
Query: 155 FSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYD-E 213
SCN R I WN ++SGY + +YD E
Sbjct: 85 IG-----SCN---------------------------DRDPIFWNILLSGYAGSRVYDAE 112
Query: 214 AFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALV 273
+FR++ + +P+S T VL CA + + G+ ++ AI GL + T G ALV
Sbjct: 113 TLRLFREMHGANYPKPSSVTAAIVLPVCARLGDVYMGRSVNCYAIKSGLDTHTLAGNALV 172
Query: 274 EMYCRY----QDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLT 329
MY + QD A AFD I+ + + GF N +A +LFS ML +
Sbjct: 173 SMYAKCGLVCQD---AYAAFDSIDEKDVVSWNAIISGFAENNLMEDAFRLFSSMLKGQIK 229
Query: 330 PDIYTVGIILSACSSL---ATMERGKQVHAYAIRCG-YDSDVHIGTALVDMYAKCGSLKH 385
P+ T+ IL C+S GK++H Y +R +DV + ALV Y + G ++
Sbjct: 230 PNYTTLANILPVCASFDEYIAYWFGKEIHGYVLRHNELLADVFVWNALVSFYLRVGRVEE 289
Query: 386 ARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILA-SGFRPDHISFLSALSACV 444
A L ++R+ DLVS NA++ YA +G + + F +L PD ++ L + AC
Sbjct: 290 AELLFRRMELRDLVSWNAIIAGYASNGEWSKALELFHELLTLDMIEPDSVTLLCIIPACA 349
Query: 445 HAGSIKTGSEFFDLMAYYDVKPSLKHYT----CMVDLLSRAGELGEAYEFIKKIPMAPDS 500
+ ++ G + Y P L T +V ++ ++ AYE I D
Sbjct: 350 QSRNLHVGKM---IHGYVLRHPLLCEDTSVGNALVSFYAKCDDIEGAYETFFMISRR-DL 405
Query: 501 VMWGALLGGCVSHG 514
+ W ++L V G
Sbjct: 406 ISWNSMLDALVESG 419
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 105/394 (26%), Positives = 175/394 (44%), Gaps = 51/394 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
Y KC ++ A + F M+ RD +SWNS++ A +G
Sbjct: 383 FYAKCDDIEGAYETFFMISRRDLISWNSMLDALVESG----------------------- 419
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
Y+ + +L M +EG P++ T+ SV+ C + K KE H Y
Sbjct: 420 -------------YNTWFLELLRWMLSEGTTPDSVTILSVVHFCVNVLKEDKVKEAHSYS 466
Query: 121 TRNGFMSNPFVV-----NGLVDVYRRCGDMLSALKIFSKFS-IKNEVSCNTIIVGYCENG 174
R+ +++ F V N ++D Y +CG++ A K+F S +N V+ II GY G
Sbjct: 467 IRHRLLASKFDVEPTIGNAILDAYAKCGNIEYASKVFQSLSENRNLVTFKAIISGYINCG 526
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTF 234
+ EA F++M + WN M+ Y +N +A +F + L GI+P + T
Sbjct: 527 LLDEAYITFNRMP----SSDLSVWNLMVRLYAENDCSSQALGLFHE-LQAHGIKPDAVTI 581
Query: 235 GSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIEN 294
S+L ACA+M S++ K+ H AI D + GAL ++Y + + A F I N
Sbjct: 582 MSLLPACAEMASVQLIKQCHGYAIR-SCFGDLHLDGALQDVYAKCGSIGYAFKLFQLIPN 640
Query: 295 IENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV 354
+ ++ G+ + A+ F M+ L + PD + +LSACS ++ G +
Sbjct: 641 KDLIIFTAMIRGYAMHGMGKEALGTFFHMIELGIKPDHVIITTVLSACSHAGLVDEGLNI 700
Query: 355 HAYAIR--CGYDSDVHIGTALVDMYAKCGSLKHA 386
Y+I G + + +VD+ A+ G + A
Sbjct: 701 F-YSIEKVHGMKLTMEQYSCVVDLLARGGRIDDA 733
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 111/248 (44%), Gaps = 24/248 (9%)
Query: 309 PNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVH 368
P + WN M S+ + D D V IL +C+ L+ ++ G+ +H +R G+ S
Sbjct: 4 PYLKAWNTM--ISD-CNGDFRQDYQAVASILKSCAGLSAIKWGRALHGSIVRIGHVSCHA 60
Query: 369 IGTALVDMYAKCGSLKHARLAYKRIST---PDLVSQNAMLTAYA-MHGHGKEGIAHFRRI 424
+ AL++MYAKCG+L ++ + I + D + N +L+ YA + E + FR +
Sbjct: 61 VSKALLNMYAKCGALDESKKLFGEIGSCNDRDPIFWNILLSGYAGSRVYDAETLRLFREM 120
Query: 425 LASGF-RPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYT----CMVDLLS 479
+ + +P ++ L C G + G + Y +K L +T +V + +
Sbjct: 121 HGANYPKPSSVTAAIVLPVCARLGDVYMGRS----VNCYAIKSGLDTHTLAGNALVSMYA 176
Query: 480 RAGEL-GEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIE--LEPNNTGN 536
+ G + +AY I D V W A++ G + +E A RL L+ N
Sbjct: 177 KCGLVCQDAYAAFDSID-EKDVVSWNAIISGFAENNLME----DAFRLFSSMLKGQIKPN 231
Query: 537 YVMLANLF 544
Y LAN+
Sbjct: 232 YTTLANIL 239
>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 722
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 186/581 (32%), Positives = 301/581 (51%), Gaps = 75/581 (12%)
Query: 55 ETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGL-EPNARTLSSVLPACARLQKLSLG 113
+ PNL W+ +I G++++ EAI + M A+G+ PN T +L +CARL L G
Sbjct: 71 DCPNLFMWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPG 130
Query: 114 KEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCEN 173
E H +I ++GF S+ FV N L+ +Y G++ A +F + +++ VS NT+I GY E
Sbjct: 131 HEVHSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEV 190
Query: 174 GNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFT 233
A LF +M++ GI P FT
Sbjct: 191 NQPESALCLFGEMQN------------------------------------SGILPDEFT 214
Query: 234 FGSVLIACADMNSLRKGKEIHALAIA--LGLQSDTFVGGALVEMYCRYQDLVAAQMAFDE 291
F ++ C+ +N GK+IHA + S+ + A+V+MY + + A+ F
Sbjct: 215 FVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNILLKSAIVDMYAKCGLINIAERVFST 274
Query: 292 IENIE------------------NLLGKMKEDGFEPNVYTWNAM--------------QL 319
+ + N+ K+ E +V +W AM +L
Sbjct: 275 MGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHERDVISWTAMISGYSQAGQCSEALEL 334
Query: 320 FSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCG-YDSDVHIGTALVDMYA 378
F EM +L + PD T+ +LSAC+ L + GK+++ I G ++ + + A++DMYA
Sbjct: 335 FKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDMYA 394
Query: 379 KCGSLKHARLAYKRI--STPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISF 436
KCGS+ A ++R+ + N+M+ A HG G+ I FR ++++G +PD ++F
Sbjct: 395 KCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFRELISTGLKPDEVTF 454
Query: 437 LSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIP 495
+ L AC H+G I+ G + F+ M Y +KP ++HY CMVDLL R G L EAY+ ++K+P
Sbjct: 455 VGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMP 514
Query: 496 MAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLAR 555
+SV+W ALL C +HGN++ G+IA +L+E+E + YV+L+N+ A A +W + +
Sbjct: 515 FEANSVIWRALLSACRTHGNVKIGEIAGQKLLEMEAQHGARYVLLSNILADANQWEEARQ 574
Query: 556 TRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEI 596
R+ M+D + K PG S+IE IH+F ASD+SH + +EI
Sbjct: 575 VRKVMEDHGIRKPPGWSYIELGGAIHRFVASDKSHPQGKEI 615
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 171/374 (45%), Gaps = 44/374 (11%)
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
+R LF Q++ + WN+MI GY + EA ++ ++ + P +FTF +L
Sbjct: 63 SRLLFSQID----CPNLFMWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLL 118
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDE--IENIE 296
+CA ++SL G E+H+ I G +SD FV AL+ +Y + +L A+ FDE + ++
Sbjct: 119 NSCARLSSLEPGHEVHSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLV 178
Query: 297 NLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHA 356
+ +K G+ +A+ LF EM + + PD +T + S CS L GKQ+HA
Sbjct: 179 SYNTMIK--GYAEVNQPESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHA 236
Query: 357 --YAIRCGYDSDVHIGTALVDMYAK--------------------------------CGS 382
Y DS++ + +A+VDMYAK CG
Sbjct: 237 QVYKNLRSIDSNILLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGE 296
Query: 383 LKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSA 442
+ AR + + D++S AM++ Y+ G E + F+ + A G +PD ++ ++ LSA
Sbjct: 297 INVARKLFNHMHERDVISWTAMISGYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSA 356
Query: 443 CVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMV-DLLSRAGELGEAYEFIKKI-PMAPDS 500
C G+ G + V T V D+ ++ G + A E +++
Sbjct: 357 CARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTG 416
Query: 501 VMWGALLGGCVSHG 514
++ +++ G HG
Sbjct: 417 FVFNSMIAGLAQHG 430
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 114/436 (26%), Positives = 198/436 (45%), Gaps = 71/436 (16%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y G+L+ A+ +F RD VS+N+
Sbjct: 155 LYSVFGNLNLARTLFDESLVRDLVSYNT-------------------------------- 182
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+I G+ + E A+ + MQ G+ P+ T ++ C+ L + ++GK+ H +
Sbjct: 183 ----MIKGYAEVNQPESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQV 238
Query: 121 TRN--GFMSNPFVVNGLVDVYRRCGDMLSALKIFSKF-SIKNEVSCNTIIVGYCENGNVA 177
+N SN + + +VD+Y +CG + A ++FS + K+ + ++++ GY G +
Sbjct: 239 YKNLRSIDSNILLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEIN 298
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
AR+LF+ M +R +ISW +MISGY EA +F+++ GI+P T +V
Sbjct: 299 VARKLFNHMH----ERDVISWTAMISGYSQAGQCSEALELFKEMEAL-GIKPDEVTLVAV 353
Query: 238 LIACADMNSLRKGKEIHALAIALGL-QSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
L ACA + + GK ++ I G+ +T + A+++MY + + +A F +
Sbjct: 354 LSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRV---- 409
Query: 297 NLLGKMKEDGFEPNVYTW---------NAMQLFSEMLSLDLTPDIYTVGIILSACSSLAT 347
GK + GF N A+ +F E++S L PD T +L AC
Sbjct: 410 ---GKNMKTGFVFNSMIAGLAQHGLGETAITVFRELISTGLKPDEVTFVGVLCACGHSGL 466
Query: 348 MERGKQV-----HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHAR-LAYKRISTPDLVSQ 401
+E GK++ +AY I+ + H G +VD+ + G L+ A L K + V
Sbjct: 467 IEEGKKLFESMFNAYGIKPQME---HYG-CMVDLLGRYGCLEEAYDLVQKMPFEANSVIW 522
Query: 402 NAMLTAYAMHGHGKEG 417
A+L+A HG+ K G
Sbjct: 523 RALLSACRTHGNVKIG 538
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/338 (21%), Positives = 148/338 (43%), Gaps = 41/338 (12%)
Query: 246 SLRKGKEIHALAIALGLQSDTFVGGALVEMYC---RYQDLVAAQMAFDEIENIENLLGKM 302
S ++G +IHA I GL F L+ + L +++ F +I+
Sbjct: 21 SFKQGLQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDHSRLLFSQIDC-------- 72
Query: 303 KEDGFEPNVYTWNAM--------------QLFSEMLSLDLTP-DIYTVGIILSACSSLAT 347
PN++ WN M L+ M++ + P + +T +L++C+ L++
Sbjct: 73 ------PNLFMWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSS 126
Query: 348 MERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTA 407
+E G +VH++ I+ G++SD+ + AL+ +Y+ G+L AR + DLVS N M+
Sbjct: 127 LEPGHEVHSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKG 186
Query: 408 YAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTG----SEFFDLMAYYD 463
YA + + F + SG PD +F++ S C G ++ + + D
Sbjct: 187 YAEVNQPESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSID 246
Query: 464 VKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAA 523
LK + +VD+ ++ G + A + + + W +++ G G + +A
Sbjct: 247 SNILLK--SAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEI---NVAR 301
Query: 524 DRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMK 561
+ + ++ + + ++ AG+ S+ ++M+
Sbjct: 302 KLFNHMHERDVISWTAMISGYSQAGQCSEALELFKEME 339
>gi|356526928|ref|XP_003532067.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 189/604 (31%), Positives = 308/604 (50%), Gaps = 48/604 (7%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KCGSL +A+ F + + S+N+++ A A + L+ A + + P++V
Sbjct: 53 LYSKCGSLHNAQTSFHLTQYPNVFSYNTLINAYAKHSLIHIARRVFDEIPQ-----PDIV 107
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
S++ +I + G + + ++ L + TLS V+ AC + L ++ H ++
Sbjct: 108 SYNTLIAAYADRGECGPTLRLFEEVRELRLGLDGFTLSGVITACG--DDVGLVRQLHCFV 165
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
G D Y N ++ Y G ++EAR
Sbjct: 166 VVCGH-----------DCYASVN--------------------NAVLACYSRKGFLSEAR 194
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+F +M G R +SWN+MI + EA +FR+++ R G++ FT SVL A
Sbjct: 195 RVFREMGE-GGGRDEVSWNAMIVACGQHREGMEAVGLFREMV-RRGLKVDMFTMASVLTA 252
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQ-DLVAAQMAFDEIENIENLL 299
+ L G++ H + I G ++ VG L+++Y + +V + F+EI + +L
Sbjct: 253 FTCVKDLVGGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRKVFEEITAPDLVL 312
Query: 300 GKMKEDGFEPNVY---TWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHA 356
GF ++Y + + + F EM PD + + SACS+L++ GKQVHA
Sbjct: 313 WNTMISGF--SLYEDLSEDGLWCFREMQRNGFRPDDCSFVCVTSACSNLSSPSLGKQVHA 370
Query: 357 YAIRCGYDSD-VHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGK 415
AI+ + V + ALV MY+KCG++ AR + + + VS N+M+ YA HG
Sbjct: 371 LAIKSDVPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNTVSLNSMIAGYAQHGVEV 430
Query: 416 EGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCM 474
E + F +L P+ I+F++ LSACVH G ++ G ++F++M + ++P +HY+CM
Sbjct: 431 ESLRLFELMLEKDIAPNSITFIAVLSACVHTGKVEEGQKYFNMMKERFCIEPEAEHYSCM 490
Query: 475 VDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNT 534
+DLL RAG+L EA I+ +P P S+ W LLG C HGN+E AA+ + LEP N
Sbjct: 491 IDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLRLEPYNA 550
Query: 535 GNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSE 594
YVML+N++A A RW + A ++ M++R + K PGCSWIE ++H F A D SH +
Sbjct: 551 APYVMLSNMYASAARWEEAATVKRLMRERGVKKKPGCSWIEIDKKVHVFVAEDTSHPMIK 610
Query: 595 EIYT 598
EI+
Sbjct: 611 EIHV 614
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 56/121 (46%), Gaps = 6/121 (4%)
Query: 338 ILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPD 397
+L AC + + GK +HA + ++ +Y+KCGSL +A+ ++ P+
Sbjct: 15 LLKACIAQRDLITGKILHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFHLTQYPN 74
Query: 398 LVSQNAMLTAYAMHGHGKEGIAHF-RRILASGFRPDHISFLSALSACVHAGSIKTGSEFF 456
+ S N ++ AYA H + H RR+ +PD +S+ + ++A G F
Sbjct: 75 VFSYNTLINAYAKH-----SLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLF 129
Query: 457 D 457
+
Sbjct: 130 E 130
>gi|225460143|ref|XP_002275945.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71490-like [Vitis vinifera]
Length = 748
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 176/556 (31%), Positives = 281/556 (50%), Gaps = 31/556 (5%)
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W+ +I + +NG+ ++A+ +M +G+ P+ T SVL AC L GKE H I
Sbjct: 169 WNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTYPSVLKACGEELDLGFGKEVHESIN 228
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
+ + V N L+ +Y +CG + A +F K ++ VS N++I Y G EA E
Sbjct: 229 ASRIKWSLIVHNALISMYGKCGKVGIARDLFDKIPERDAVSWNSMISVYASMGMWNEAFE 288
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
LF M ++ II WN++ GY+ Y A + + + G S L AC
Sbjct: 289 LFGSMWAEDIELNIIIWNTIAGGYLRTGNYKGALELLSQM-RKCGSHLDSVALIIGLGAC 347
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK 301
+ + + GKEIH+ AI V AL+ MY R +DL A + F +E
Sbjct: 348 SHIGDAKLGKEIHSFAIRSCFGEVDTVKNALITMYSRCKDLKHAYLLFQLME-------- 399
Query: 302 MKEDGFEPNVYTWNAMQ--------------LFSEMLSLDLTPDIYTVGIILSACSSLAT 347
++ TWN++ L EML + P+ T+ +L C+ +A
Sbjct: 400 ------AKSLITWNSIISGCCHMDRSEEASFLLREMLLFGIEPNYVTIASVLPLCARVAN 453
Query: 348 MERGKQVHAYAIRC-GYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLT 406
++ GK+ H Y R + + + ALVDMYA+ G + AR + + D ++ +M+
Sbjct: 454 LQHGKEFHCYMTRREDFKDHLLLWNALVDMYARSGKVLEARRVFDMLGERDKMTYTSMIA 513
Query: 407 AYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVK 465
Y M G G+ + F + +PDHI+ ++ LSAC H+G + G F+ M + Y +
Sbjct: 514 GYGMQGEGQAALKLFEEMNNFQIKPDHITMIAVLSACSHSGLVTQGQLLFEKMRSLYGLT 573
Query: 466 PSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADR 525
P L+H+ CM DL RAG L +A E I+ +P P MW L+G C H N E G+ AA++
Sbjct: 574 PHLEHFACMTDLFGRAGLLNKAKEIIRNMPYKPTPAMWATLIGACRIHRNTEIGEWAAEK 633
Query: 526 LIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRA 585
L+E++P N G YV++AN++A AG W+ LA+ R M+D + K+PGC+W++ F
Sbjct: 634 LLEMKPENPGYYVLIANMYAAAGCWNKLAKVRIFMRDLGVRKAPGCAWVDVGTGFSPFLV 693
Query: 586 SDRSHDRSEEIYTIID 601
D S+ ++EIY +++
Sbjct: 694 DDTSNANADEIYPLLE 709
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 113/390 (28%), Positives = 185/390 (47%), Gaps = 41/390 (10%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKCG + A+ +F +PERD VSWNS+++ A+ G+ EA E M + D E N++
Sbjct: 245 MYGKCGKVGIARDLFDKIPERDAVSWNSMISVYASMGMWNEAFELFGSMWAEDIEL-NII 303
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
W+ + GG+ + G + A+ +L +M+ G ++ L L AC+ + LGKE H +
Sbjct: 304 IWNTIAGGYLRTGNYKGALELLSQMRKCGSHLDSVALIIGLGACSHIGDAKLGKEIHSFA 363
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R+ F V N L+ +Y RC D+ A +F K+ ++ N+II G C
Sbjct: 364 IRSCFGEVDTVKNALITMYSRCKDLKHAYLLFQLMEAKSLITWNSIISGCC--------- 414
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
++D S +EA + R++L+ GIEP T SVL
Sbjct: 415 ------------------------HMDRS--EEASFLLREMLLF-GIEPNYVTIASVLPL 447
Query: 241 CADMNSLRKGKEIHA-LAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
CA + +L+ GKE H + + + ALV+MY R ++ A+ FD + + +
Sbjct: 448 CARVANLQHGKEFHCYMTRREDFKDHLLLWNALVDMYARSGKVLEARRVFDMLGERDKMT 507
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
G+ A++LF EM + + PD T+ +LSACS + +G Q+ +
Sbjct: 508 YTSMIAGYGMQGEGQAALKLFEEMNNFQIKPDHITMIAVLSACSHSGLVTQG-QLLFEKM 566
Query: 360 RCGYDSDVHIG--TALVDMYAKCGSLKHAR 387
R Y H+ + D++ + G L A+
Sbjct: 567 RSLYGLTPHLEHFACMTDLFGRAGLLNKAK 596
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 103/200 (51%), Gaps = 1/200 (0%)
Query: 55 ETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGK 114
E +L++W+++I G EEA +L M G+EPN T++SVLP CAR+ L GK
Sbjct: 399 EAKSLITWNSIISGCCHMDRSEEASFLLREMLLFGIEPNYVTIASVLPLCARVANLQHGK 458
Query: 115 EFHGYIT-RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCEN 173
EFH Y+T R F + + N LVD+Y R G +L A ++F +++++ ++I GY
Sbjct: 459 EFHCYMTRREDFKDHLLLWNALVDMYARSGKVLEARRVFDMLGERDKMTYTSMIAGYGMQ 518
Query: 174 GNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFT 233
G A +LF++M + ++ I+ +++S + L + +F + G+ P
Sbjct: 519 GEGQAALKLFEEMNNFQIKPDHITMIAVLSACSHSGLVTQGQLLFEKMRSLYGLTPHLEH 578
Query: 234 FGSVLIACADMNSLRKGKEI 253
F + L K KEI
Sbjct: 579 FACMTDLFGRAGLLNKAKEI 598
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/364 (23%), Positives = 149/364 (40%), Gaps = 50/364 (13%)
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
S+L +C D+ SL +G+++H I+LG + + LV Y + LV A + + +
Sbjct: 105 SLLSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLVDAHVITENSNIL 164
Query: 296 ENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVH 355
+ + N + A+ + +M+ + PD +T +L AC + GK+VH
Sbjct: 165 HPFPWNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTYPSVLKACGEELDLGFGKEVH 224
Query: 356 AY--AIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGH 413
A R + VH AL+ MY KCG + AR + +I D VS N+M++ YA G
Sbjct: 225 ESINASRIKWSLIVH--NALISMYGKCGKVGIARDLFDKIPERDAVSWNSMISVYASMGM 282
Query: 414 GKEGIAHFRRILAS-----------------------------------GFRPDHISFLS 438
E F + A G D ++ +
Sbjct: 283 WNEAFELFGSMWAEDIELNIIIWNTIAGGYLRTGNYKGALELLSQMRKCGSHLDSVALII 342
Query: 439 ALSACVHAGSIKTGSEF--FDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPM 496
L AC H G K G E F + + + ++K+ ++ + SR +L AY + ++
Sbjct: 343 GLGACSHIGDAKLGKEIHSFAIRSCFGEVDTVKN--ALITMYSRCKDLKHAY-LLFQLME 399
Query: 497 APDSVMWGALLGGCVSHGNLEFGQIAADR--LIELEPNNTGNYVMLANLFAYAGRWSDLA 554
A + W +++ GC E L +EP NYV +A++ R ++L
Sbjct: 400 AKSLITWNSIISGCCHMDRSEEASFLLREMLLFGIEP----NYVTIASVLPLCARVANLQ 455
Query: 555 RTRQ 558
++
Sbjct: 456 HGKE 459
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 118/239 (49%), Gaps = 9/239 (3%)
Query: 282 LVAAQMAFDEIEN--IENLLGKMKEDGFEPNVY----TWNAMQLFSEMLSLDLTPDIYTV 335
L +AQ F ++ I++LL +KE N+ T + ++L + S DL ++ +
Sbjct: 46 LESAQETFTSVDASMIDSLLTSLKEFTSRGNLLDAFKTVSLIRLHASSASQDLI--VHPI 103
Query: 336 GIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST 395
+LS+C+ + ++ G+Q+H + I G++ + LV Y+ L A + + +
Sbjct: 104 SSLLSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLVDAHVITENSNI 163
Query: 396 PDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEF 455
N ++++Y +G ++ ++ +++++ G RPD+ ++ S L AC + G E
Sbjct: 164 LHPFPWNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTYPSVLKACGEELDLGFGKEV 223
Query: 456 FDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
+ + +K SL + ++ + + G++G A + KIP D+V W +++ S G
Sbjct: 224 HESINASRIKWSLIVHNALISMYGKCGKVGIARDLFDKIP-ERDAVSWNSMISVYASMG 281
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 61/124 (49%), Gaps = 6/124 (4%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY + G + +A++VF M+ ERD +++ S++ G AL+ E M++ + P+ +
Sbjct: 483 MYARSGKVLEARRVFDMLGERDKMTYTSMIAGYGMQGEGQAALKLFEEMNNFQIK-PDHI 541
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQA-EGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
+ AV+ + +G + + +M++ GL P+ + + R L+ KE
Sbjct: 542 TMIAVLSACSHSGLVTQGQLLFEKMRSLYGLTPHLEHFACMTDLFGRAGLLNKAKE---- 597
Query: 120 ITRN 123
I RN
Sbjct: 598 IIRN 601
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 65/147 (44%), Gaps = 6/147 (4%)
Query: 26 WNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRM 85
WN++V A +G VLEA + + D T ++++I G+ G + A+ + M
Sbjct: 477 WNALVDMYARSGKVLEARRVFDMLGERDKMT-----YTSMIAGYGMQGEGQAALKLFEEM 531
Query: 86 QAEGLEPNARTLSSVLPACARLQKLSLGK-EFHGYITRNGFMSNPFVVNGLVDVYRRCGD 144
++P+ T+ +VL AC+ ++ G+ F + G + + D++ R G
Sbjct: 532 NNFQIKPDHITMIAVLSACSHSGLVTQGQLLFEKMRSLYGLTPHLEHFACMTDLFGRAGL 591
Query: 145 MLSALKIFSKFSIKNEVSCNTIIVGYC 171
+ A +I K + ++G C
Sbjct: 592 LNKAKEIIRNMPYKPTPAMWATLIGAC 618
>gi|356518523|ref|XP_003527928.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g08210-like [Glycine max]
Length = 686
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 179/581 (30%), Positives = 300/581 (51%), Gaps = 52/581 (8%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGSL DAK+VF +P ++ SWN+++ A GL+ +A ++M P+LV
Sbjct: 149 MYVKCGSLMDAKRVFHEIPCKNSTSWNTLILGHAKQGLMRDAFNLFDQMPE-----PDLV 203
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+++I G N A+ L M +GL+ +A T L AC L +L++G++ H I
Sbjct: 204 SWNSIIAGLADNA-SPHALQFLSMMHGKGLKLDAFTFPCALKACGLLGELTMGRQIHCCI 262
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
++G + + ++ L+D+Y C + A+KIF K N +AE+
Sbjct: 263 IKSGLECSCYCISSLIDMYSNCKLLDEAMKIFDK------------------NSPLAESL 304
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+ WNSM+SGYV N + A M + G + S+TF L
Sbjct: 305 AV---------------WNSMLSGYVANGDWWRALGMIA-CMHHSGAQFDSYTFSIALKV 348
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE---- 296
C ++LR ++H L I G + D VG L+++Y + ++ +A F+ + N +
Sbjct: 349 CIYFDNLRLASQVHGLIITRGYELDHVVGSILIDLYAKQGNINSALRLFERLPNKDVVAW 408
Query: 297 -NLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVH 355
+L+ G V++ LF +M+ LDL D + + I+L SSLA+++ GKQ+H
Sbjct: 409 SSLIVGCARLGLGTLVFS-----LFMDMVHLDLEIDHFVLSIVLKVSSSLASLQSGKQIH 463
Query: 356 AYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGK 415
++ ++ GY+S+ I TAL DMYAKCG ++ A + + D +S ++ A +G
Sbjct: 464 SFCLKKGYESERVITTALTDMYAKCGEIEDALALFDCLYEIDTMSWTGIIVGCAQNGRAD 523
Query: 416 EGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFF-DLMAYYDVKPSLKHYTCM 474
+ I+ +++ SG +P+ I+ L L+AC HAG ++ F + + + P +HY CM
Sbjct: 524 KAISILHKMIESGTKPNKITILGVLTACRHAGLVEEAWTIFKSIETEHGLTPCPEHYNCM 583
Query: 475 VDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNT 534
VD+ ++AG EA I +P PD +W +LL C ++ N I A+ L+ P +
Sbjct: 584 VDIFAKAGRFKEARNLINDMPFKPDKTIWCSLLDACGTYKNRHLANIVAEHLLATSPEDA 643
Query: 535 GNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIE 575
Y+ML+N++A G W +L++ R+ ++ + K G SWIE
Sbjct: 644 SVYIMLSNVYASLGMWDNLSKVREAVRKVGI-KGAGKSWIE 683
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 137/539 (25%), Positives = 245/539 (45%), Gaps = 52/539 (9%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KC DDA+ +F MP R N+V
Sbjct: 47 VYAKCSRFDDARTLFDEMPHR------------------------------------NIV 70
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRM-QAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
S++ ++ FT +G EA+ + M +++ ++PN S+VL AC + + LG H +
Sbjct: 71 SFTTMVSAFTNSGRPHEALTLYNHMLESKTVQPNQFLYSAVLKACGLVGDVELGMLVHQH 130
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
++ + ++N L+D+Y +CG ++ A ++F + KN S NT+I+G+ + G + +A
Sbjct: 131 VSEARLEFDTVLMNALLDMYVKCGSLMDAKRVFHEIPCKNSTSWNTLILGHAKQGLMRDA 190
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
LFDQM + ++SWNS+I+G DN+ F ++ G++ +FTF L
Sbjct: 191 FNLFDQMP----EPDLVSWNSIIAGLADNA--SPHALQFLSMMHGKGLKLDAFTFPCALK 244
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
AC + L G++IH I GL+ + +L++MY + L A FD+ + L
Sbjct: 245 ACGLLGELTMGRQIHCCIIKSGLECSCYCISSLIDMYSNCKLLDEAMKIFDKNSPLAESL 304
Query: 300 GKMKE--DGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAY 357
G+ N W A+ + + M D YT I L C + QVH
Sbjct: 305 AVWNSMLSGYVANGDWWRALGMIACMHHSGAQFDSYTFSIALKVCIYFDNLRLASQVHGL 364
Query: 358 AIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEG 417
I GY+ D +G+ L+D+YAK G++ A ++R+ D+V+ ++++ A G G
Sbjct: 365 IITRGYELDHVVGSILIDLYAKQGNINSALRLFERLPNKDVVAWSSLIVGCARLGLGTLV 424
Query: 418 IAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEF--FDLMAYYDVKPSLKHYTCMV 475
+ F ++ DH L S+++G + F L Y+ + + T +
Sbjct: 425 FSLFMDMVHLDLEIDHFVLSIVLKVSSSLASLQSGKQIHSFCLKKGYESERVIT--TALT 482
Query: 476 DLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIE--LEPN 532
D+ ++ GE+ +A + D++ W ++ GC +G + ++IE +PN
Sbjct: 483 DMYAKCGEIEDALALFDCL-YEIDTMSWTGIIVGCAQNGRADKAISILHKMIESGTKPN 540
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 110/446 (24%), Positives = 193/446 (43%), Gaps = 68/446 (15%)
Query: 101 LPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNE 160
L C R Q + K H I + G ++ F++N ++ VY +C S+F
Sbjct: 10 LRCCGRFQAIKHAKSLHSLIIKLGLSNHIFLLNSIISVYAKC----------SRFD---- 55
Query: 161 VSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRD 220
+AR LFD+M H R I+S+ +M+S + ++ EA +++
Sbjct: 56 -----------------DARTLFDEMPH----RNIVSFTTMVSAFTNSGRPHEALTLYNH 94
Query: 221 LLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQ 280
+L ++P F + +VL AC + + G +H L+ DT + AL++MY +
Sbjct: 95 MLESKTVQPNQFLYSAVLKACGLVGDVELGMLVHQHVSEARLEFDTVLMNALLDMYVKCG 154
Query: 281 DLVAAQMAFDEIENIEN------LLGKMKE----DGF-------EPNVYTWN-------- 315
L+ A+ F EI + +LG K+ D F EP++ +WN
Sbjct: 155 SLMDAKRVFHEIPCKNSTSWNTLILGHAKQGLMRDAFNLFDQMPEPDLVSWNSIIAGLAD 214
Query: 316 -----AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIG 370
A+Q S M L D +T L AC L + G+Q+H I+ G + +
Sbjct: 215 NASPHALQFLSMMHGKGLKLDAFTFPCALKACGLLGELTMGRQIHCCIIKSGLECSCYCI 274
Query: 371 TALVDMYAKCGSLKHARLAYKRIS--TPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASG 428
++L+DMY+ C L A + + S L N+ML+ Y +G + + SG
Sbjct: 275 SSLIDMYSNCKLLDEAMKIFDKNSPLAESLAVWNSMLSGYVANGDWWRALGMIACMHHSG 334
Query: 429 FRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAY 488
+ D +F AL C++ +++ S+ L+ + + ++DL ++ G + A
Sbjct: 335 AQFDSYTFSIALKVCIYFDNLRLASQVHGLIITRGYELDHVVGSILIDLYAKQGNINSAL 394
Query: 489 EFIKKIPMAPDSVMWGALLGGCVSHG 514
+++P D V W +L+ GC G
Sbjct: 395 RLFERLP-NKDVVAWSSLIVGCARLG 419
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/185 (20%), Positives = 81/185 (43%), Gaps = 2/185 (1%)
Query: 331 DIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAY 390
D+ + + L C ++ K +H+ I+ G + + + +++ +YAKC AR +
Sbjct: 2 DLNQIQLALRCCGRFQAIKHAKSLHSLIIKLGLSNHIFLLNSIISVYAKCSRFDDARTLF 61
Query: 391 KRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILAS-GFRPDHISFLSALSACVHAGSI 449
+ ++VS M++A+ G E + + +L S +P+ + + L AC G +
Sbjct: 62 DEMPHRNIVSFTTMVSAFTNSGRPHEALTLYNHMLESKTVQPNQFLYSAVLKACGLVGDV 121
Query: 450 KTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
+ G ++ ++ ++D+ + G L +A +IP +S W L+ G
Sbjct: 122 ELGMLVHQHVSEARLEFDTVLMNALLDMYVKCGSLMDAKRVFHEIP-CKNSTSWNTLILG 180
Query: 510 CVSHG 514
G
Sbjct: 181 HAKQG 185
>gi|356570253|ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Glycine max]
Length = 815
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 175/571 (30%), Positives = 303/571 (53%), Gaps = 44/571 (7%)
Query: 33 CAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEP 92
C L L A + M+ DN V+++A++ G+++ G++ +AI + F+MQ G P
Sbjct: 185 CKTRSLGL-ACHLFKHMAEKDN-----VTFNALLTGYSKEGFNHDAINLFFKMQDLGFRP 238
Query: 93 NARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIF 152
+ T ++VL A ++ + G++ H ++ + F+ N FV N L+D Y +
Sbjct: 239 SEFTFAAVLTAGIQMDDIEFGQQVHSFVVKCNFVWNVFVANALLDFYSK----------- 287
Query: 153 SKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYD 212
+ + EAR+LF +M + IS+N +I+ N +
Sbjct: 288 --------------------HDRIVEARKLFYEMPEVDG----ISYNVLITCCAWNGRVE 323
Query: 213 EAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGAL 272
E+ +FR+L + F F ++L A+ +L G++IH+ AI S+ VG +L
Sbjct: 324 ESLELFRELQFTR-FDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDAISEVLVGNSL 382
Query: 273 VEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDI 332
V+MY + A F ++ + ++ G+ + ++LF EM + D
Sbjct: 383 VDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMHRAKIGADS 442
Query: 333 YTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKR 392
T IL AC++LA++ GKQ+H+ IR G S+V G+ALVDMYAKCGS+K A ++
Sbjct: 443 ATYASILRACANLASLTLGKQLHSRIIRSGCLSNVFSGSALVDMYAKCGSIKEALQMFQE 502
Query: 393 ISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTG 452
+ + VS NA+++AYA +G G + F +++ SG +P+ +SFLS L AC H G ++ G
Sbjct: 503 MPVRNSVSWNALISAYAQNGDGGHALRSFEQMIHSGLQPNSVSFLSILCACSHCGLVEEG 562
Query: 453 SEFFDLMA-YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCV 511
++F+ M Y ++P +HY MVD+L R+G EA + + ++P PD +MW ++L C
Sbjct: 563 LQYFNSMTQVYKLEPRREHYASMVDMLCRSGRFDEAEKLMARMPFEPDEIMWSSILNSCR 622
Query: 512 SHGNLEFGQIAADRLIELEP-NNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPG 570
H N E AAD+L ++ + YV ++N++A AG W + + ++ +++R + K P
Sbjct: 623 IHKNQELAIKAADQLFNMKGLRDAAPYVSMSNIYAAAGEWDSVGKVKKALRERGIRKVPA 682
Query: 571 CSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
SW+E + + H F A+D SH +++EI +D
Sbjct: 683 YSWVEIKQKTHVFSANDTSHPQTKEITRKLD 713
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 109/400 (27%), Positives = 198/400 (49%), Gaps = 6/400 (1%)
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ + GF N N V + + GD+ +A K+F + KN +S NT+I+GY ++GN++ A
Sbjct: 33 MIKTGFDPNTCRFNFQVQTHLQRGDLGAARKLFDEMPHKNVISTNTMIMGYLKSGNLSTA 92
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
R LFD M VQR +++W +I GY ++ + EAF++F D+ R G+ P T ++L
Sbjct: 93 RSLFDSM----VQRSVVTWTMLIGGYAQHNRFLEAFNLFADMC-RHGMVPDHITLATLLS 147
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
+ S+ + ++H + +G S V +L++ YC+ + L A F + +N+
Sbjct: 148 GFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKDNVT 207
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
G+ + +A+ LF +M L P +T +L+A + +E G+QVH++ +
Sbjct: 208 FNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIEFGQQVHSFVV 267
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
+C + +V + AL+D Y+K + AR + + D +S N ++T A +G +E +
Sbjct: 268 KCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITCCAWNGRVEESLE 327
Query: 420 HFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLS 479
FR + + F F + LS ++ +++ G + D + +VD+ +
Sbjct: 328 LFRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDAISEVLVGNSLVDMYA 387
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFG 519
+ + GEA + SV W AL+ G V G E G
Sbjct: 388 KCDKFGEANRIFADLA-HQSSVPWTALISGYVQKGLHEDG 426
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 115/492 (23%), Positives = 185/492 (37%), Gaps = 125/492 (25%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y K + +A+K+F MPE D +S+N ++T CA NG V E+LE
Sbjct: 285 YSKHDRIVEARKLFYEMPEVDGISYNVLITCCAWNGRVEESLE----------------- 327
Query: 62 WSAVIGGFTQNGYDEEAIGMLFR-MQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
LFR +Q + +++L A L +G++ H
Sbjct: 328 --------------------LFRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQA 367
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+S V N LVD+Y +C A +IF+ + ++ V +I GY + G +
Sbjct: 368 IVTDAISEVLVGNSLVDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGL 427
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+LF +M R I S T+ S+L A
Sbjct: 428 KLFVEMH------------------------------------RAKIGADSATYASILRA 451
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA++ SL GK++H+ I G S+ F G ALV+MY + + A F E+ ++
Sbjct: 452 CANLASLTLGKQLHSRIIRSGCLSNVFSGSALVDMYAKCGSIKEALQMFQEMPVRNSVSW 511
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ-----VH 355
+ N +A++ F +M+ L P+ + IL ACS +E G Q
Sbjct: 512 NALISAYAQNGDGGHALRSFEQMIHSGLQPNSVSFLSILCACSHCGLVEEGLQYFNSMTQ 571
Query: 356 AYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGK 415
Y + + H + +VDM + G A R+
Sbjct: 572 VYKLEPRRE---HYAS-MVDMLCRSGRFDEAEKLMARMP--------------------- 606
Query: 416 EGIAHFRRILASGFRPDHISFLSALSAC-VHAG---SIKTGSEFFDLMAYYDVKPSLKHY 471
F PD I + S L++C +H +IK + F++ D P Y
Sbjct: 607 -------------FEPDEIMWSSILNSCRIHKNQELAIKAADQLFNMKGLRDAAP----Y 649
Query: 472 TCMVDLLSRAGE 483
M ++ + AGE
Sbjct: 650 VSMSNIYAAAGE 661
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 59/109 (54%), Gaps = 6/109 (5%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERM--SSLDNETPN 58
MY KCGS+ +A ++F+ MP R+ VSWN++++A A NG AL E+M S L PN
Sbjct: 486 MYAKCGSIKEALQMFQEMPVRNSVSWNALISAYAQNGDGGHALRSFEQMIHSGLQ---PN 542
Query: 59 LVSWSAVIGGFTQNGYDEEAIGMLFRM-QAEGLEPNARTLSSVLPACAR 106
VS+ +++ + G EE + M Q LEP +S++ R
Sbjct: 543 SVSFLSILCACSHCGLVEEGLQYFNSMTQVYKLEPRREHYASMVDMLCR 591
>gi|212720716|ref|NP_001132746.1| uncharacterized protein LOC100194233 [Zea mays]
gi|194695290|gb|ACF81729.1| unknown [Zea mays]
Length = 539
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 153/442 (34%), Positives = 258/442 (58%), Gaps = 6/442 (1%)
Query: 161 VSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRD 220
+S N +I GY +NG++ AR+LFD+M R + +WN+M++G ++ L +E+ F
Sbjct: 1 MSWNILIGGYVKNGDLETARKLFDEMP----ARNVATWNAMVAGLTNSGLNEESLGFFF- 55
Query: 221 LLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQ 280
+ R+G++P + GS+ CA + + G+++HA + GL D VG +L MY R
Sbjct: 56 AMRREGMQPDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCG 115
Query: 281 DLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILS 340
L + A + ++ + G N A++ F M + + T ++
Sbjct: 116 FLRDGEAALRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVT 175
Query: 341 ACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVS 400
+CS LA + +G+Q+HA AI+ G D V + T+LV MY++CG L + S DLV
Sbjct: 176 SCSDLAALAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVL 235
Query: 401 QNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA 460
+AM++AY HGHG++ + F++++A+G P+ ++FL+ L AC H+G G F+LM
Sbjct: 236 CSAMISAYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMT 295
Query: 461 -YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFG 519
Y ++PS+KHYTC+VDLL R+G L EA + I +P+ PD V+W LL C + +
Sbjct: 296 KTYGLQPSVKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSACKTQKKFDMA 355
Query: 520 QIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDE 579
+ A+R+IEL+P+++ +YV+L+N+ A + RW D+++ R+ M+++ + K PG SW+E + +
Sbjct: 356 ERIAERVIELDPHDSASYVLLSNIRATSSRWEDVSKVRETMREQNVRKEPGVSWVELKGQ 415
Query: 580 IHKFRASDRSHDRSEEIYTIID 601
IH+F D SH R EI ++
Sbjct: 416 IHQFCTGDESHSRQREIVECLE 437
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 109/391 (27%), Positives = 173/391 (44%), Gaps = 53/391 (13%)
Query: 24 VSWNSVVTACAANGLVLEALECLERMSSLDNETP--NLVSWSAVIGGFTQNGYDEEAIGM 81
+SWN ++ NG LE L +E P N+ +W+A++ G T +G +EE++G
Sbjct: 1 MSWNILIGGYVKNGD-------LETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGF 53
Query: 82 LFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRR 141
F M+ EG++P+ L S+ CA L+ + G++ H Y+ R+G + V + L +Y R
Sbjct: 54 FFAMRREGMQPDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMR 113
Query: 142 CG---DMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISW 198
CG D +AL+ +I VSCNT I G +NG+ A E F M RG
Sbjct: 114 CGFLRDGEAALRALPSLNI---VSCNTTISGRTQNGDAEGALEFFCLM------RGA--- 161
Query: 199 NSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAI 258
G+E + TF S + +C+D+ +L +G++IHALAI
Sbjct: 162 ---------------------------GVEANAVTFVSAVTSCSDLAALAQGQQIHALAI 194
Query: 259 ALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQ 318
G+ V +LV MY R L ++ E + +L + + + A+
Sbjct: 195 KTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISAYGFHGHGQKAVG 254
Query: 319 LFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRC-GYDSDVHIGTALVDMY 377
LF +M++ P+ T +L ACS + G + G V T +VD+
Sbjct: 255 LFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYGLQPSVKHYTCIVDLL 314
Query: 378 AKCGSLKHAR-LAYKRISTPDLVSQNAMLTA 407
+ G L A L PD V +L+A
Sbjct: 315 GRSGCLNEAEDLILSMPVQPDGVIWKTLLSA 345
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 112/238 (47%), Gaps = 10/238 (4%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
N+VS + I G TQNG E A+ M+ G+E NA T S + +C+ L L+ G++ H
Sbjct: 131 NIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQGQQIH 190
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
+ G V+ LV +Y RCG + + ++ ++S + V C+ +I Y +G+
Sbjct: 191 ALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISAYGFHGHGQ 250
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
+A LF QM G + +++ +++ + L DE + F + G++P+ + +
Sbjct: 251 KAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYGLQPSVKHYTCI 310
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
+ L + ++ L +++ +Q D + L+ C+ Q FD E I
Sbjct: 311 VDLLGRSGCLNEAED---LILSMPVQPDGVIWKTLLSA-CK------TQKKFDMAERI 358
>gi|359482011|ref|XP_002276416.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Vitis vinifera]
Length = 629
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 174/552 (31%), Positives = 287/552 (51%), Gaps = 40/552 (7%)
Query: 52 LDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLS 111
L N T SW+A + + + +EA+ + +M A G PNA T +CA L
Sbjct: 17 LQNTT---ASWNARLRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPL 73
Query: 112 LGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYC 171
G + HG++ + G PFV L+ +Y +C
Sbjct: 74 AGSQLHGHVIKTGCEPEPFVQTSLISMYCKCS---------------------------- 105
Query: 172 ENGNVAEARELFDQMEHLGVQRGI-ISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPT 230
+A AR++FD+ H R + + +N++I+GY NS + +A +FR + ++G+
Sbjct: 106 ---TIASARKVFDENHH---SRNLAVCYNALIAGYSLNSRFSDAVLLFRQM-RKEGVSVN 158
Query: 231 SFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFD 290
+ T ++ CA L G +HA ++ GL D VG L+ MY R + A+ FD
Sbjct: 159 AVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVGNCLLTMYVRCGSVDFARKLFD 218
Query: 291 EIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMER 350
+ + G+ N + + L+ +M + PD T+ +LS+C+ L
Sbjct: 219 GMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGIVPDPVTLVGVLSSCAHLGAHAA 278
Query: 351 GKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAM 410
G++V G+ + + AL++MYA+CG+L AR + ++ +++S A++ Y M
Sbjct: 279 GREVEQRIELSGFGFNPFLKNALINMYARCGNLVKARAIFDGMTEKNVISWTAIIAGYGM 338
Query: 411 HGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLK 469
HG G+ + F +++S PD +F+S LSAC HAG + G +F M Y ++P +
Sbjct: 339 HGQGELAVQLFDEMISSDELPDGAAFVSVLSACSHAGLTEKGLYYFTAMERDYGLQPGPE 398
Query: 470 HYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIEL 529
HY+C+VDLL RAG L EA + I + + PD +WGALLG C H N+E ++A +++IE
Sbjct: 399 HYSCVVDLLGRAGRLEEARKLIGSMSVEPDGAVWGALLGACKIHRNVELAELAFEKVIEF 458
Query: 530 EPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRS 589
EP N G YV+L+N+F+ AG + R R M++R++ K PGCS++E + IH F A DR+
Sbjct: 459 EPTNIGYYVLLSNIFSEAGNMEGILRVRVMMRERKLKKEPGCSYVEYQGRIHLFLAGDRT 518
Query: 590 HDRSEEIYTIID 601
H +++EIY ++D
Sbjct: 519 HPQAQEIYHMLD 530
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 164/343 (47%), Gaps = 8/343 (2%)
Query: 189 LGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLR 248
L +Q SWN+ + + EA +++ +L G P +FTF +CA ++
Sbjct: 15 LDLQNTTASWNARLRELARQRHFQEALNLYCQMLA-SGDSPNAFTFPFAFKSCASLSLPL 73
Query: 249 KGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKE--DG 306
G ++H I G + + FV +L+ MYC+ + +A+ FDE + NL G
Sbjct: 74 AGSQLHGHVIKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAG 133
Query: 307 FEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSD 366
+ N +A+ LF +M ++ + T+ ++ C+ + G +HA ++R G D D
Sbjct: 134 YSLNSRFSDAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGD 193
Query: 367 VHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILA 426
+ +G L+ MY +CGS+ AR + + L++ NAM++ YA +G + +R++
Sbjct: 194 LSVGNCLLTMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEF 253
Query: 427 SGFRPDHISFLSALSACVHAGSIKTGSEFFDL--MAYYDVKPSLKHYTCMVDLLSRAGEL 484
+G PD ++ + LS+C H G+ G E ++ + P LK+ ++++ +R G L
Sbjct: 254 TGIVPDPVTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKN--ALINMYARCGNL 311
Query: 485 GEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLI 527
+A + + + W A++ G HG E D +I
Sbjct: 312 VKARAIFDGM-TEKNVISWTAIIAGYGMHGQGELAVQLFDEMI 353
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 138/296 (46%), Gaps = 39/296 (13%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +CGS+D A+K+F MPE+ ++WN++++ A NGL L+ +M
Sbjct: 203 MYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKME---------- 252
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
FT G+ P+ TL VL +CA L + G+E I
Sbjct: 253 --------FT------------------GIVPDPVTLVGVLSSCAHLGAHAAGREVEQRI 286
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+GF NPF+ N L+++Y RCG+++ A IF + KN +S II GY +G A
Sbjct: 287 ELSGFGFNPFLKNALINMYARCGNLVKARAIFDGMTEKNVISWTAIIAGYGMHGQGELAV 346
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+LFD+M ++ S++S L ++ F + G++P + V+
Sbjct: 347 QLFDEMISSDELPDGAAFVSVLSACSHAGLTEKGLYYFTAMERDYGLQPGPEHYSCVVDL 406
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
L + ++ L ++ ++ D V GAL+ ++++ A++AF+++ E
Sbjct: 407 LGRAGRLEEARK---LIGSMSVEPDGAVWGALLGACKIHRNVELAELAFEKVIEFE 459
>gi|449448940|ref|XP_004142223.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
Length = 847
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 179/558 (32%), Positives = 293/558 (52%), Gaps = 43/558 (7%)
Query: 46 LERMSSLDNETP--NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPA 103
LE +L N P + W+++I + G+ EAI + +M+ E ++ + RT++ +L
Sbjct: 313 LESSWALFNAVPTSDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSL 372
Query: 104 CARLQKLSL-GKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVS 162
C L S+ G+ H + ++G + ++ N L+ +Y
Sbjct: 373 CNDLNDGSIWGRGLHAHAMKSGIELDAYLGNALLSMY----------------------- 409
Query: 163 CNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLL 222
++ + A+ +F++M L V ISWN+MIS + + +AF +F ++
Sbjct: 410 --------VKHNQITAAQYVFEKMRGLDV----ISWNTMISAFAQSMFRAKAFELFL-MM 456
Query: 223 MRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDL 282
I+ S+T S+L C D + L G+ IH AI GL+ +T + +L EMY D
Sbjct: 457 CESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCGDE 516
Query: 283 VAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSAC 342
AA F + + + N A+ LF+ M+S +L P+ T+ IL++C
Sbjct: 517 RAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHMIS-ELEPNSVTIINILTSC 575
Query: 343 SSLATMERGKQVHAYAIR--CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVS 400
+ LA + G+ +HAY R + D + A + MYA+CG L++A + + T +VS
Sbjct: 576 TQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYAEKIFCTLQTRSIVS 635
Query: 401 QNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA 460
NAM+T Y MHG G++ F ++L GF+P+++SF S LSAC H+G TG + F M
Sbjct: 636 WNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTVTGLQLFHSMV 695
Query: 461 Y-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFG 519
+ + P L HY CMVDLL R G EA FI +P+ PD+ +W ALL C N +
Sbjct: 696 RDFGIAPQLTHYGCMVDLLGRGGHFSEAIAFINSMPIEPDASIWRALLSSCQIKSNNKLL 755
Query: 520 QIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDE 579
+ +L+ELEP+N GN+++L+N++A AG WS++ + R+ +++R + K PG SWI ++
Sbjct: 756 ETIFGKLVELEPSNPGNFILLSNIYAAAGLWSEVVQIRKWLRERGLGKPPGTSWIVIGNQ 815
Query: 580 IHKFRASDRSHDRSEEIY 597
+H F A+D H +SE IY
Sbjct: 816 VHHFTATDVLHPQSERIY 833
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 147/607 (24%), Positives = 261/607 (42%), Gaps = 116/607 (19%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y KCG + +A KVF MPERD VSWN
Sbjct: 105 YCKCGLVAEASKVFVEMPERDLVSWN---------------------------------- 130
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
A+I G+ +EA+ + M+ GL PN+RT+ ++L AC + +L LG+E HGY
Sbjct: 131 --ALISGYVGCLCYKEAVLLFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCL 188
Query: 122 RNG-FMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
RNG F + +V LV Y R +LS ++FS ++N VS N II G+ G+ A+A
Sbjct: 189 RNGLFDMDAYVGTALVGFYMRFDAVLSH-RVFSLMLVRNIVSWNAIITGFLNVGDCAKAL 247
Query: 181 ELFD-------------------------------QMEHLGVQRGIIS----WNSMISGY 205
+L+ Q+ L ++ +I+ N++++ Y
Sbjct: 248 KLYSSMLIEGIKFDAVTMLVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMY 307
Query: 206 VDNSLYDEAFSMFRDLLMRDG------------------------------IEPTSFTFG 235
DN + ++++F + D I+ T
Sbjct: 308 SDNGSLESSWALFNAVPTSDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIA 367
Query: 236 SVLIACADMNSLRK-GKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIEN 294
+L C D+N G+ +HA A+ G++ D ++G AL+ MY ++ + AAQ F+++
Sbjct: 368 IMLSLCNDLNDGSIWGRGLHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRG 427
Query: 295 IENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV 354
++ + F +++ A +LF M ++ + YT+ +L+ C + + G+ +
Sbjct: 428 LDVISWNTMISAFAQSMFRAKAFELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSI 487
Query: 355 HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHG 414
H +AI+ G + + + T+L +MY CG + A + R DLVS N+++++Y + +
Sbjct: 488 HGFAIKNGLEINTSLNTSLTEMYINCGDERAATNMFTRCPQRDLVSWNSLISSYIKNDNA 547
Query: 415 KEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKH--YT 472
+ + F ++ S P+ ++ ++ L++C + G +V +
Sbjct: 548 GKALLLFNHMI-SELEPNSVTIINILTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLAN 606
Query: 473 CMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG-----NLEFGQIAADRLI 527
+ + +R G+L A E I V W A++ G HG L F Q+ D
Sbjct: 607 AFITMYARCGKLQYA-EKIFCTLQTRSIVSWNAMITGYGMHGRGRDATLAFAQMLDD--- 662
Query: 528 ELEPNNT 534
+PNN
Sbjct: 663 GFKPNNV 669
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 115/421 (27%), Positives = 191/421 (45%), Gaps = 78/421 (18%)
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W+++I T+ D + +M++ G+ P++ T+ VL AC RL + G H +I
Sbjct: 28 WNSIIKHHTKLKNDHAILSTYTQMESLGITPDSATMPLVLKACGRLNAIGNGVRIHSFIR 87
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
+++ V LVD Y +C G VAEA +
Sbjct: 88 GLDLINDVRVGTALVDFYCKC-------------------------------GLVAEASK 116
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
+F +M +R ++SWN++ISGYV Y EA +F ++ + G+ P S T ++L+AC
Sbjct: 117 VFVEMP----ERDLVSWNALISGYVGCLCYKEAVLLFVEM-KKAGLTPNSRTVVALLLAC 171
Query: 242 ADMNSLRKGKEIHALAIALGL-QSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
+M LR G+EIH + GL D +VG ALV Y R+ D V + F +
Sbjct: 172 GEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFYMRF-DAVLSHRVFSLM-------- 222
Query: 301 KMKEDGFEPNVYTWNA--------------MQLFSEMLSLDLTPDIYTVGIILSACSSLA 346
N+ +WNA ++L+S ML + D T+ +++ AC+
Sbjct: 223 ------LVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTMLVVIQACAEYG 276
Query: 347 TMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLT 406
+ G Q+H AI+ +D+ I AL++MY+ GSL+ + + + T D N+M++
Sbjct: 277 CLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPTSDAALWNSMIS 336
Query: 407 AYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSAC------------VHAGSIKTGSE 454
+Y G E IA F ++ + D + LS C +HA ++K+G E
Sbjct: 337 SYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIWGRGLHAHAMKSGIE 396
Query: 455 F 455
Sbjct: 397 L 397
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 150/318 (47%), Gaps = 4/318 (1%)
Query: 198 WNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALA 257
WNS+I + D A + GI P S T VL AC +N++ G IH+
Sbjct: 28 WNSIIKHHTKLK-NDHAILSTYTQMESLGITPDSATMPLVLKACGRLNAIGNGVRIHSFI 86
Query: 258 IALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAM 317
L L +D VG ALV+ YC+ + A F E+ + + G+ + A+
Sbjct: 87 RGLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMPERDLVSWNALISGYVGCLCYKEAV 146
Query: 318 QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCG-YDSDVHIGTALVDM 376
LF EM LTP+ TV +L AC + + G+++H Y +R G +D D ++GTALV
Sbjct: 147 LLFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGF 206
Query: 377 YAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISF 436
Y + ++ R+ + + ++VS NA++T + G + + + +L G + D ++
Sbjct: 207 YMRFDAVLSHRV-FSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTM 265
Query: 437 LSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPM 496
L + AC G ++ G + L +++ L ++++ S G L ++ +P
Sbjct: 266 LVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPT 325
Query: 497 APDSVMWGALLGGCVSHG 514
+ D+ +W +++ + G
Sbjct: 326 S-DAALWNSMISSYIGFG 342
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 101/240 (42%), Gaps = 39/240 (16%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY CG A +F P+RD VSWNS++++ N DN L
Sbjct: 509 MYINCGDERAATNMFTRCPQRDLVSWNSLISSYIKN----------------DNAGKAL- 551
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+LF LEPN+ T+ ++L +C +L L LG+ H Y
Sbjct: 552 --------------------LLFNHMISELEPNSVTIINILTSCTQLAHLPLGQCLHAYT 591
Query: 121 TRN--GFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
TR + + N + +Y RCG + A KIF ++ VS N +I GY +G +
Sbjct: 592 TRREVSLEMDASLANAFITMYARCGKLQYAEKIFCTLQTRSIVSWNAMITGYGMHGRGRD 651
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
A F QM G + +S+ S++S + L +F ++ GI P +G ++
Sbjct: 652 ATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTVTGLQLFHSMVRDFGIAPQLTHYGCMV 711
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 65/173 (37%), Gaps = 37/173 (21%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +CG L A+K+F + R VSWN+++T
Sbjct: 611 MYARCGKLQYAEKIFCTLQTRSIVSWNAMIT----------------------------- 641
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKE-FHGY 119
G+ +G +A +M +G +PN + +SVL AC+ G + FH
Sbjct: 642 -------GYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTVTGLQLFHSM 694
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCE 172
+ G +VD+ R G A+ + I+ + S ++ C+
Sbjct: 695 VRDFGIAPQLTHYGCMVDLLGRGGHFSEAIAFINSMPIEPDASIWRALLSSCQ 747
>gi|449502637|ref|XP_004161700.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
Length = 847
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 179/558 (32%), Positives = 293/558 (52%), Gaps = 43/558 (7%)
Query: 46 LERMSSLDNETP--NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPA 103
LE +L N P + W+++I + G+ EAI + +M+ E ++ + RT++ +L
Sbjct: 313 LESSWALFNAVPTSDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSL 372
Query: 104 CARLQKLSL-GKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVS 162
C L S+ G+ H + ++G + ++ N L+ +Y +
Sbjct: 373 CNDLNDGSIWGRGLHAHAMKSGIELDAYLGNALLSMYVK--------------------- 411
Query: 163 CNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLL 222
+ + A+ +F++M L V ISWN+MIS + + +AF +F ++
Sbjct: 412 ----------HNQITAAQYVFEKMRGLDV----ISWNTMISAFAQSMFRAKAFELFL-MM 456
Query: 223 MRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDL 282
I+ S+T S+L C D + L G+ IH AI GL+ +T + +L EMY D
Sbjct: 457 CESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCGDE 516
Query: 283 VAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSAC 342
AA F + + + N A+ LF+ M+S +L P+ T+ IL++C
Sbjct: 517 RAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHMIS-ELEPNSVTIINILTSC 575
Query: 343 SSLATMERGKQVHAYAIR--CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVS 400
+ LA + G+ +HAY R + D + A + MYA+CG L++A + + T +VS
Sbjct: 576 TQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYAEKIFCTLQTRSIVS 635
Query: 401 QNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA 460
NAM+T Y MHG G++ F ++L GF+P+++SF S LSAC H+G TG + F M
Sbjct: 636 WNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTVTGLQLFHSMV 695
Query: 461 Y-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFG 519
+ + P L HY CMVDLL R G EA FI +P+ PD+ +W ALL C N +
Sbjct: 696 RDFGIAPQLTHYGCMVDLLGRGGHFSEAIAFINSMPIEPDASIWRALLSSCQIKSNNKLL 755
Query: 520 QIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDE 579
+ +L+ELEP+N GN+++L+N++A AG WS++ + R+ +++R + K PG SWI ++
Sbjct: 756 ETIFGKLVELEPSNPGNFILLSNIYAAAGLWSEVVQIRKWLRERGLGKPPGTSWIVIGNQ 815
Query: 580 IHKFRASDRSHDRSEEIY 597
+H F A+D H +SE IY
Sbjct: 816 VHHFTATDVLHPQSERIY 833
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 147/607 (24%), Positives = 261/607 (42%), Gaps = 116/607 (19%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y KCG + +A KVF MPERD VSWN
Sbjct: 105 YCKCGLVAEASKVFVEMPERDLVSWN---------------------------------- 130
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
A+I G+ +EA+ + M+ GL PN+RT+ ++L AC + +L LG+E HGY
Sbjct: 131 --ALISGYVGCLCYKEAVLLFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCL 188
Query: 122 RNG-FMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
RNG F + +V LV Y R +LS ++FS ++N VS N II G+ G+ A+A
Sbjct: 189 RNGLFDMDAYVGTALVGFYMRFDAVLSH-RVFSLMLVRNIVSWNAIITGFLNVGDCAKAL 247
Query: 181 ELFD-------------------------------QMEHLGVQRGIIS----WNSMISGY 205
+L+ Q+ L ++ +I+ N++++ Y
Sbjct: 248 KLYSSMLIEGIKFDAVTMLVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMY 307
Query: 206 VDNSLYDEAFSMFRDLLMRDG------------------------------IEPTSFTFG 235
DN + ++++F + D I+ T
Sbjct: 308 SDNGSLESSWALFNAVPTSDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIA 367
Query: 236 SVLIACADMNSLRK-GKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIEN 294
+L C D+N G+ +HA A+ G++ D ++G AL+ MY ++ + AAQ F+++
Sbjct: 368 IMLSLCNDLNDGSIWGRGLHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRG 427
Query: 295 IENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV 354
++ + F +++ A +LF M ++ + YT+ +L+ C + + G+ +
Sbjct: 428 LDVISWNTMISAFAQSMFRAKAFELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSI 487
Query: 355 HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHG 414
H +AI+ G + + + T+L +MY CG + A + R DLVS N+++++Y + +
Sbjct: 488 HGFAIKNGLEINTSLNTSLTEMYINCGDERAATNMFTRCPQRDLVSWNSLISSYIKNDNA 547
Query: 415 KEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHY--T 472
+ + F ++ S P+ ++ ++ L++C + G +V +
Sbjct: 548 GKALLLFNHMI-SELEPNSVTIINILTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLAN 606
Query: 473 CMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG-----NLEFGQIAADRLI 527
+ + +R G+L A E I V W A++ G HG L F Q+ D
Sbjct: 607 AFITMYARCGKLQYA-EKIFCTLQTRSIVSWNAMITGYGMHGRGRDATLAFAQMLDD--- 662
Query: 528 ELEPNNT 534
+PNN
Sbjct: 663 GFKPNNV 669
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 115/421 (27%), Positives = 190/421 (45%), Gaps = 78/421 (18%)
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W+++I T+ D + +M++ G+ P++ T+ VL AC RL + G H I
Sbjct: 28 WNSIIKHHTKLKNDHAILSTYTQMESLGITPDSATMPLVLKACGRLNAIGNGVRIHSCIR 87
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
+++ V LVD Y +C G VAEA +
Sbjct: 88 GLDLINDVRVGTALVDFYCKC-------------------------------GLVAEASK 116
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
+F +M +R ++SWN++ISGYV Y EA +F ++ + G+ P S T ++L+AC
Sbjct: 117 VFVEMP----ERDLVSWNALISGYVGCLCYKEAVLLFVEM-KKAGLTPNSRTVVALLLAC 171
Query: 242 ADMNSLRKGKEIHALAIALGL-QSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
+M LR G+EIH + GL D +VG ALV Y R+ D V + F +
Sbjct: 172 GEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFYMRF-DAVLSHRVFSLM-------- 222
Query: 301 KMKEDGFEPNVYTWNA--------------MQLFSEMLSLDLTPDIYTVGIILSACSSLA 346
N+ +WNA ++L+S ML + D T+ +++ AC+
Sbjct: 223 ------LVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTMLVVIQACAEYG 276
Query: 347 TMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLT 406
+ G Q+H AI+ +D+ I AL++MY+ GSL+ + + + T D N+M++
Sbjct: 277 CLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPTSDAALWNSMIS 336
Query: 407 AYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSAC------------VHAGSIKTGSE 454
+Y G E IA F ++ + D + LS C +HA ++K+G E
Sbjct: 337 SYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIWGRGLHAHAMKSGIE 396
Query: 455 F 455
Sbjct: 397 L 397
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 150/318 (47%), Gaps = 4/318 (1%)
Query: 198 WNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALA 257
WNS+I + D A + GI P S T VL AC +N++ G IH+
Sbjct: 28 WNSIIKHHTKLK-NDHAILSTYTQMESLGITPDSATMPLVLKACGRLNAIGNGVRIHSCI 86
Query: 258 IALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAM 317
L L +D VG ALV+ YC+ + A F E+ + + G+ + A+
Sbjct: 87 RGLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMPERDLVSWNALISGYVGCLCYKEAV 146
Query: 318 QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCG-YDSDVHIGTALVDM 376
LF EM LTP+ TV +L AC + + G+++H Y +R G +D D ++GTALV
Sbjct: 147 LLFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGF 206
Query: 377 YAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISF 436
Y + ++ R+ + + ++VS NA++T + G + + + +L G + D ++
Sbjct: 207 YMRFDAVLSHRV-FSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTM 265
Query: 437 LSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPM 496
L + AC G ++ G + L +++ L ++++ S G L ++ +P
Sbjct: 266 LVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPT 325
Query: 497 APDSVMWGALLGGCVSHG 514
+ D+ +W +++ + G
Sbjct: 326 S-DAALWNSMISSYIGFG 342
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 101/240 (42%), Gaps = 39/240 (16%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY CG A +F P+RD VSWNS++++ N DN L
Sbjct: 509 MYINCGDERAATNMFTRCPQRDLVSWNSLISSYIKN----------------DNAGKAL- 551
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+LF LEPN+ T+ ++L +C +L L LG+ H Y
Sbjct: 552 --------------------LLFNHMISELEPNSVTIINILTSCTQLAHLPLGQCLHAYT 591
Query: 121 TRN--GFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
TR + + N + +Y RCG + A KIF ++ VS N +I GY +G +
Sbjct: 592 TRREVSLEMDASLANAFITMYARCGKLQYAEKIFCTLQTRSIVSWNAMITGYGMHGRGRD 651
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
A F QM G + +S+ S++S + L +F ++ GI P +G ++
Sbjct: 652 ATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTVTGLQLFHSMVRDFGIAPQLTHYGCMV 711
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 65/173 (37%), Gaps = 37/173 (21%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +CG L A+K+F + R VSWN+++T
Sbjct: 611 MYARCGKLQYAEKIFCTLQTRSIVSWNAMIT----------------------------- 641
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKE-FHGY 119
G+ +G +A +M +G +PN + +SVL AC+ G + FH
Sbjct: 642 -------GYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTVTGLQLFHSM 694
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCE 172
+ G +VD+ R G A+ + I+ + S ++ C+
Sbjct: 695 VRDFGIAPQLTHYGCMVDLLGRGGHFSEAIAFINSMPIEPDASIWRALLSSCQ 747
>gi|297819724|ref|XP_002877745.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297323583|gb|EFH54004.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 764
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 191/601 (31%), Positives = 300/601 (49%), Gaps = 89/601 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY CG L+ A+++F+ + D V+WN++
Sbjct: 156 MYSSCGDLESARRIFECVNGGDAVAWNTM------------------------------- 184
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFR-MQAEGLEPNARTLSSVLPACARL--QKLSLGKEFH 117
I G +N E+ + MLFR M G++P T S VL AC++L + S+GK H
Sbjct: 185 -----IVGIFRNDKIEDGL-MLFRSMLMSGVDPTQFTYSMVLNACSKLGSYRYSVGKLIH 238
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
+ + +++ V N L+D+Y CGDM A +F K N
Sbjct: 239 ARMIVSDILADLPVENALLDMYCSCGDMKEAFYVFGKIHNPN------------------ 280
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
++SWNS+ISG +N ++A M+R LL P +TF +
Sbjct: 281 -----------------LVSWNSIISGCSENGFGEQAILMYRRLLRISTPRPDEYTFSAA 323
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAF------DE 291
+ A A+ GK +H LG + FVG L+ MY + + +AQ F D
Sbjct: 324 IPATAEPEKFIHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNGEAESAQKVFGVITERDV 383
Query: 292 IENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG 351
+ E ++G+ + E A+QLF EM D +++ +L ACS +A + +G
Sbjct: 384 VLWTEMIVGESRVGNSE------CAVQLFIEMYREKNRTDGFSLSSVLGACSDMAMLRQG 437
Query: 352 KQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMH 411
+ H+ AI+ G+D+ + + ALVDMY K G + A + +S PDL N+ML AY+ H
Sbjct: 438 QVFHSLAIKTGFDNVMSVSGALVDMYGKNGKYETAESIFSLVSNPDLKCWNSMLGAYSQH 497
Query: 412 GHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHY 471
G ++ + F +IL +GF PD +++LS L+AC H GS + G ++ M + KHY
Sbjct: 498 GMVEKAQSFFEQILENGFTPDAVTYLSLLAACSHKGSTQEGKFLWNQMKEQGITAGFKHY 557
Query: 472 TCMVDLLSRAGELGEAYEFIKKIPMAPDSV-MWGALLGGCVSHGNLEFGQIAADRLIELE 530
+CMV L+S+AG LGEA E IK+ P + +W LL CV+ NL+ G AAD++++L+
Sbjct: 558 SCMVSLVSKAGLLGEALELIKQSPPENNQAELWRTLLSACVNARNLQIGLYAADQILKLD 617
Query: 531 PNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIE-DRDEIHKFRASDRS 589
P +T +++L+NL+A GRW D+A R+K++ K PG SWIE + + H F + D+S
Sbjct: 618 PEDTATHILLSNLYAVNGRWKDVAEMRRKIRGLASAKDPGLSWIEVNNNNTHVFSSGDQS 677
Query: 590 H 590
+
Sbjct: 678 N 678
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 140/532 (26%), Positives = 230/532 (43%), Gaps = 77/532 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +CGSL+ A+K+F MPER N+V
Sbjct: 54 MYVRCGSLEQARKLFDKMPER------------------------------------NVV 77
Query: 61 SWSAVIGGFTQN-GYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
S++A+ +++N Y A ++ +M +E L+PN+ T +S++ C L+ + +G H
Sbjct: 78 SYNALYSAYSRNLDYASYAFSLINQMASESLKPNSSTFTSLVQVCTVLEDVLMGSLLHSQ 137
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
I + G+ N V ++ +Y CGD+ SA +IF + + V+ NT+IVG N
Sbjct: 138 IIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFECVNGGDAVAWNTMIVGIFRN------ 191
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
D++E + +FR +LM G++PT FT+ VL
Sbjct: 192 ----DKIE-------------------------DGLMLFRSMLM-SGVDPTQFTYSMVLN 221
Query: 240 ACADMNSLRK--GKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
AC+ + S R GK IHA I + +D V AL++MYC D+ A F +I N
Sbjct: 222 ACSKLGSYRYSVGKLIHARMIVSDILADLPVENALLDMYCSCGDMKEAFYVFGKIHNPNL 281
Query: 298 LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLT-PDIYTVGIILSACSSLATMERGKQVHA 356
+ G N + A+ ++ +L + PD YT + A + GK +H
Sbjct: 282 VSWNSIISGCSENGFGEQAILMYRRLLRISTPRPDEYTFSAAIPATAEPEKFIHGKLLHG 341
Query: 357 YAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKE 416
+ GY+ V +GT L+ MY K G + A+ + I+ D+V M+ + G+ +
Sbjct: 342 QVTKLGYERSVFVGTTLLSMYFKNGEAESAQKVFGVITERDVVLWTEMIVGESRVGNSEC 401
Query: 417 GIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVD 476
+ F + R D S S L AC ++ G F L + +VD
Sbjct: 402 AVQLFIEMYREKNRTDGFSLSSVLGACSDMAMLRQGQVFHSLAIKTGFDNVMSVSGALVD 461
Query: 477 LLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIE 528
+ + G+ E E I + PD W ++LG HG +E Q ++++E
Sbjct: 462 MYGKNGKY-ETAESIFSLVSNPDLKCWNSMLGAYSQHGMVEKAQSFFEQILE 512
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 113/407 (27%), Positives = 195/407 (47%), Gaps = 31/407 (7%)
Query: 164 NTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDE-AFSMFRDLL 222
N +I Y G++ +AR+LFD+M +R ++S+N++ S Y N Y AFS+ +
Sbjct: 49 NNLISMYVRCGSLEQARKLFDKMP----ERNVVSYNALYSAYSRNLDYASYAFSLINQ-M 103
Query: 223 MRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDL 282
+ ++P S TF S++ C + + G +H+ I LG + V +++ MY DL
Sbjct: 104 ASESLKPNSSTFTSLVQVCTVLEDVLMGSLLHSQIIKLGYSDNVVVQTSVLGMYSSCGDL 163
Query: 283 VAAQMAF------DEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVG 336
+A+ F D + ++G + D E + + LF ML + P +T
Sbjct: 164 ESARRIFECVNGGDAVAWNTMIVGIFRNDKIE------DGLMLFRSMLMSGVDPTQFTYS 217
Query: 337 IILSACSSLATMER--GKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS 394
++L+ACS L + GK +HA I +D+ + AL+DMY CG +K A + +I
Sbjct: 218 MVLNACSKLGSYRYSVGKLIHARMIVSDILADLPVENALLDMYCSCGDMKEAFYVFGKIH 277
Query: 395 TPDLVSQNAMLTAYAMHGHGKEGIAHFRRIL-ASGFRPDHISFLSALSACVHAGSIKTGS 453
P+LVS N++++ + +G G++ I +RR+L S RPD +F +A+ A G
Sbjct: 278 NPNLVSWNSIISGCSENGFGEQAILMYRRLLRISTPRPDEYTFSAAIPATAEPEKFIHGK 337
Query: 454 EFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSH 513
+ + S+ T ++ + + GE E+ + + + D V+W ++ G
Sbjct: 338 LLHGQVTKLGYERSVFVGTTLLSMYFKNGE-AESAQKVFGVITERDVVLWTEMIVGESRV 396
Query: 514 GNLEFGQIAADRLIEL--EPNNTGNYVMLANLFAYAGRWSDLARTRQ 558
GN E A IE+ E N T + +L + G SD+A RQ
Sbjct: 397 GNSE---CAVQLFIEMYREKNRTDGF----SLSSVLGACSDMAMLRQ 436
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 143/313 (45%), Gaps = 7/313 (2%)
Query: 241 CADMNSLRKGKEIHALAIALGLQSDT---FVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
C + +L++ ++HA+ + G S + + L+ MY R L A+ FD++
Sbjct: 17 CVSITALKRACQLHAIILTAGAGSASESPYKNNNLISMYVRCGSLEQARKLFDKMPERNV 76
Query: 298 LLGKMKEDGFEPNV-YTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHA 356
+ + N+ Y A L ++M S L P+ T ++ C+ L + G +H+
Sbjct: 77 VSYNALYSAYSRNLDYASYAFSLINQMASESLKPNSSTFTSLVQVCTVLEDVLMGSLLHS 136
Query: 357 YAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKE 416
I+ GY +V + T+++ MY+ CG L+ AR ++ ++ D V+ N M+ + ++
Sbjct: 137 QIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFECVNGGDAVAWNTMIVGIFRNDKIED 196
Query: 417 GIAHFRRILASGFRPDHISFLSALSACVHAGSIK--TGSEFFDLMAYYDVKPSLKHYTCM 474
G+ FR +L SG P ++ L+AC GS + G M D+ L +
Sbjct: 197 GLMLFRSMLMSGVDPTQFTYSMVLNACSKLGSYRYSVGKLIHARMIVSDILADLPVENAL 256
Query: 475 VDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNT 534
+D+ G++ EA+ KI P+ V W +++ GC +G E + RL+ +
Sbjct: 257 LDMYCSCGDMKEAFYVFGKI-HNPNLVSWNSIISGCSENGFGEQAILMYRRLLRISTPRP 315
Query: 535 GNYVMLANLFAYA 547
Y A + A A
Sbjct: 316 DEYTFSAAIPATA 328
>gi|225464746|ref|XP_002265138.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
chloroplastic [Vitis vinifera]
Length = 825
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 181/620 (29%), Positives = 314/620 (50%), Gaps = 104/620 (16%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY + G +D A+++F DC CLER N
Sbjct: 264 MYAELGCVDFAREIF------DC---------------------CLER---------NTE 287
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFR-MQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
W+ +IGG+ QN EAI + + M++E + T S L A ++LQ L LG++ H Y
Sbjct: 288 VWNTMIGGYVQNNCPIEAIDLFVQVMESEQFVLDDVTFLSALTAISQLQWLELGRQLHAY 347
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
I ++ + ++N ++ +Y RC G++ +
Sbjct: 348 ILKSSTILQVVILNAIIVMYSRC-------------------------------GSIGTS 376
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
++F M ++R +++WN+M+S +V N L DE M + + G S T ++L
Sbjct: 377 FKVFSNM----LERDVVTWNTMVSAFVQNGLDDEGL-MLVFAMQKQGFMVDSVTLTALLS 431
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
+++ S GK+ HA I G+Q + + L++MY + + AQ F+
Sbjct: 432 LASNLRSQEIGKQAHAYLIRHGIQFEG-MDSYLIDMYAKSGLITTAQQLFE--------- 481
Query: 300 GKMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSSL 345
K ++ + TWNAM +F +M+ ++ P+ T+ IL AC+ +
Sbjct: 482 ---KNSDYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAVTLASILPACNPM 538
Query: 346 ATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAML 405
T+ GKQ+H +AIRC + +V +GTAL+DMY+K G++ +A + + V+ M+
Sbjct: 539 GTIGLGKQIHGFAIRCFLNRNVFVGTALLDMYSKSGAITYAENVFAETLEKNSVTYTTMI 598
Query: 406 TAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDV 464
++Y HG G+ ++ F +L SG +PD ++F++ LSAC +AG + G F M Y +
Sbjct: 599 SSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAILSACSYAGLVDEGLRIFQSMEREYKI 658
Query: 465 KPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSV-MWGALLGGCVSHGNLEFGQIAA 523
+PS +HY C+ D+L R G + EAYEF+K + ++ +WG+LLG C HG E G++ A
Sbjct: 659 QPSAEHYCCVADMLGRVGRVVEAYEFVKGLGEEGNTFGIWGSLLGACRIHGEFELGKVVA 718
Query: 524 DRLIELEPNN--TGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIH 581
++L+E+E + TG +V+L+N++A G W ++ R R++M+ + + K GCSW+E ++
Sbjct: 719 NKLLEMEKGSSLTGYHVLLSNIYAAEGNWDNVDRVRKEMRQKGLMKEAGCSWVEVAGHVN 778
Query: 582 KFRASDRSHDRSEEIYTIID 601
F + D H + EIY +++
Sbjct: 779 CFMSRDHKHPQCAEIYQMLE 798
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 134/494 (27%), Positives = 227/494 (45%), Gaps = 33/494 (6%)
Query: 57 PNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKE 115
P V W+ +I GF N +A+ RM+A + ++ T SS L ACA+ + L LGK
Sbjct: 66 PTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPKFDSYTFSSTLKACAQARSLKLGKA 125
Query: 116 FHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGN 175
H ++ R+ F S+ V N L+++Y C + L F+ +C+ +
Sbjct: 126 LHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFN-----NCDLV--------- 171
Query: 176 VAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFG 235
R +FD M +R +++WN+MIS YV EAF MFR +MR GI PT +F
Sbjct: 172 ----RRVFDTMR----KRNVVAWNTMISWYVKTERLIEAFKMFRT-MMRMGIRPTPVSFV 222
Query: 236 SVLIACADMNSLRKGKEIHALAIALG--LQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
+V A M+ ++ L + LG D FV + + MY + A+ FD
Sbjct: 223 NVFPAVWRMSDYDNANVLYGLVVKLGSDFVDDFFVVSSAIFMYAELGCVDFAREIFDCCL 282
Query: 294 NIENLLGKMKEDGFEPNVYTWNAMQLFSEML-SLDLTPDIYTVGIILSACSSLATMERGK 352
+ G+ N A+ LF +++ S D T L+A S L +E G+
Sbjct: 283 ERNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFVLDDVTFLSALTAISQLQWLELGR 342
Query: 353 QVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHG 412
Q+HAY ++ V I A++ MY++CGS+ + + + D+V+ N M++A+ +G
Sbjct: 343 QLHAYILKSSTILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNG 402
Query: 413 HGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVK-PSLKHY 471
EG+ + GF D ++ + LS + S + G + + + ++ + Y
Sbjct: 403 LDDEGLMLVFAMQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQFEGMDSY 462
Query: 472 TCMVDLLSRAGELGEAYE-FIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELE 530
++D+ +++G + A + F K D W A++ G +G E G ++I E
Sbjct: 463 --LIDMYAKSGLITTAQQLFEKNSDYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMI--E 518
Query: 531 PNNTGNYVMLANLF 544
N N V LA++
Sbjct: 519 QNVRPNAVTLASIL 532
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 119/475 (25%), Positives = 198/475 (41%), Gaps = 69/475 (14%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
N+V+W+ +I + + EA M M G+ P + +V PA R+ +
Sbjct: 182 NVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPAVWRMSDYDNANVLY 241
Query: 118 GYITRNG--FMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGN 175
G + + G F+ + FVV+ + I Y E G
Sbjct: 242 GLVVKLGSDFVDDFFVVS-------------------------------SAIFMYAELGC 270
Query: 176 VAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFG 235
V ARE+FD ++R WN+MI GYV N+ EA +F ++ + TF
Sbjct: 271 VDFAREIFD----CCLERNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFVLDDVTFL 326
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
S L A + + L G+++HA + + A++ MY R + + F +
Sbjct: 327 SALTAISQLQWLELGRQLHAYILKSSTILQVVILNAIIVMYSRCGSIGTSFKVFSNM--- 383
Query: 296 ENLLGKMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSA 341
E +V TWN M L M D T+ +LS
Sbjct: 384 -----------LERDVVTWNTMVSAFVQNGLDDEGLMLVFAMQKQGFMVDSVTLTALLSL 432
Query: 342 CSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDL--V 399
S+L + E GKQ HAY IR G + + + L+DMYAK G + A+ +++ S D
Sbjct: 433 ASNLRSQEIGKQAHAYLIRHGIQFE-GMDSYLIDMYAKSGLITTAQQLFEKNSDYDRDEA 491
Query: 400 SQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM 459
+ NAM+ Y +G +EG A FR+++ RP+ ++ S L AC G+I G +
Sbjct: 492 TWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAVTLASILPACNPMGTIGLGKQIHGFA 551
Query: 460 AYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
+ ++ T ++D+ S++G + A E + + +SV + ++ HG
Sbjct: 552 IRCFLNRNVFVGTALLDMYSKSGAITYA-ENVFAETLEKNSVTYTTMISSYGQHG 605
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/364 (20%), Positives = 152/364 (41%), Gaps = 29/364 (7%)
Query: 171 CENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPT 230
C G+ +A LFD + + + WN++I G++ N++ +A + + +
Sbjct: 48 CRQGHPHQALHLFDSIP----RPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPKFD 103
Query: 231 SFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMY--CRYQ-DLVAAQM 287
S+TF S L ACA SL+ GK +H + S V +L+ MY C + +
Sbjct: 104 SYTFSSTLKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAY 163
Query: 288 AFDEIENIENLLGKMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIY 333
F+ + + + M++ NV WN M ++F M+ + + P
Sbjct: 164 DFNNCDLVRRVFDTMRKR----NVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPV 219
Query: 334 TVGIILSACSSLATMERGKQVHAYAIRCGYD--SDVHIGTALVDMYAKCGSLKHARLAYK 391
+ + A ++ + ++ ++ G D D + ++ + MYA+ G + AR +
Sbjct: 220 SFVNVFPAVWRMSDYDNANVLYGLVVKLGSDFVDDFFVVSSAIFMYAELGCVDFAREIFD 279
Query: 392 RISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILAS-GFRPDHISFLSALSACVHAGSIK 450
+ N M+ Y + E I F +++ S F D ++FLSAL+A ++
Sbjct: 280 CCLERNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFVLDDVTFLSALTAISQLQWLE 339
Query: 451 TGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGC 510
G + + + ++ + SR G +G +++ + + D V W ++
Sbjct: 340 LGRQLHAYILKSSTILQVVILNAIIVMYSRCGSIGTSFKVFSNM-LERDVVTWNTMVSAF 398
Query: 511 VSHG 514
V +G
Sbjct: 399 VQNG 402
>gi|413918945|gb|AFW58877.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 768
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 181/593 (30%), Positives = 303/593 (51%), Gaps = 73/593 (12%)
Query: 27 NSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQ 86
N++VT + +G V + ER+ D L SW ++I G Q G + +A+ + M
Sbjct: 185 NALVTMYSKSGSVGDGFALFERIRDKD-----LFSWGSIIAGLAQQGREMDALHIFREMI 239
Query: 87 AEGLE-PNARTLSSVLPACAR-LQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGD 144
AEG+ PN SV AC+ + L G++ HG + N + L D+Y RC
Sbjct: 240 AEGMHHPNEFHFGSVFRACSVVINSLEYGEQIHGLCVKYKLDRNSYAGCSLGDMYARCNK 299
Query: 145 MLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISG 204
+ SA+K+F + + ++SWNS+I+
Sbjct: 300 LDSAMKVFYRIESPD-----------------------------------LVSWNSLINA 324
Query: 205 YVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQS 264
+ + L EA +F ++ ++P T ++L AC ++LR+G+ IH+ + LGL
Sbjct: 325 FSADGLLSEAMVLFSEM-RYSSLKPDGITVMALLCACVGCDALRQGRSIHSYLVKLGLGG 383
Query: 265 DTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAM------- 317
D V +L+ MY R D +A F E + +V TWN++
Sbjct: 384 DVMVCNSLISMYTRCLDFPSAMDVFHETN--------------DRDVVTWNSILTACVQH 429
Query: 318 -------QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIG 370
+LF + S + D ++ +LSA + L E KQVHAYA + G SD +
Sbjct: 430 RHMEDVFKLFRLLHSSMPSLDRISLNNVLSASAELGYFEMAKQVHAYAFKVGLVSDAILS 489
Query: 371 TALVDMYAKCGSLKHARLAYKRIST-PDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGF 429
AL+D YAKCGSL A ++ + T D+ S ++++ YA G+ KE + F R+ G
Sbjct: 490 NALIDTYAKCGSLDDANKLFEIMGTGRDVFSWSSLIVGYAQFGYAKEALDLFARMRNLGV 549
Query: 430 RPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMVDLLSRAGELGEAY 488
+P+H++F+ L AC G + G ++ +M Y + P+ +H +C++DLL+RAG L EA
Sbjct: 550 KPNHVTFVGVLIACSRVGLVDEGCYYYSIMEPEYGIVPTKEHCSCVIDLLARAGRLSEAA 609
Query: 489 EFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAG 548
+F+ ++P PD +MW LL +H ++E G+ AA+ ++ ++P+++ YV+L N++A +G
Sbjct: 610 KFVDQMPFEPDIIMWNTLLAASRTHNDVEMGKRAAEGVLNIDPSHSAAYVLLCNIYASSG 669
Query: 549 RWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
W++ AR ++ M+ + KSPG SWI+ + E+ F DRSH S+E+YT++D
Sbjct: 670 NWNEFARLKKDMRSSGVQKSPGKSWIKLKGELKVFIVEDRSHPESDEMYTMLD 722
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 136/537 (25%), Positives = 222/537 (41%), Gaps = 74/537 (13%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYG+C + D A+ VF M +R N V
Sbjct: 89 MYGRCAAPDSARMVFDGMLDR------------------------------------NPV 112
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+AVI QN +A+G+ M G P+ L S + ACA L L LG++ H
Sbjct: 113 SWAAVIAAHAQNSRCADAMGLFSSMLRLGTAPDEFALGSAVRACAELGDLGLGRQVHAQA 172
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
++ + V N LV +Y + G + +F + K+ S +II G + G R
Sbjct: 173 IKSDNGGHLIVQNALVTMYSKSGSVGDGFALFERIRDKDLFSWGSIIAGLAQQG-----R 227
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
E+ +A +FR+++ P F FGSV A
Sbjct: 228 EM------------------------------DALHIFREMIAEGMHHPNEFHFGSVFRA 257
Query: 241 CA-DMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
C+ +NSL G++IH L + L +++ G +L +MY R L +A F IE+ + +
Sbjct: 258 CSVVINSLEYGEQIHGLCVKYKLDRNSYAGCSLGDMYARCNKLDSAMKVFYRIESPDLVS 317
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
+ F + AM LFSEM L PD TV +L AC + +G+ +H+Y +
Sbjct: 318 WNSLINAFSADGLLSEAMVLFSEMRYSSLKPDGITVMALLCACVGCDALRQGRSIHSYLV 377
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
+ G DV + +L+ MY +C A + + D+V+ N++LTA H H ++
Sbjct: 378 KLGLGGDVMVCNSLISMYTRCLDFPSAMDVFHETNDRDVVTWNSILTACVQHRHMEDVFK 437
Query: 420 HFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLS 479
FR + +S D IS + LSA G + + + ++D +
Sbjct: 438 LFRLLHSSMPSLDRISLNNVLSASAELGYFEMAKQVHAYAFKVGLVSDAILSNALIDTYA 497
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE--FGQIAADRLIELEPNNT 534
+ G L +A + + + D W +L+ G G + A R + ++PN+
Sbjct: 498 KCGSLDDANKLFEIMGTGRDVFSWSSLIVGYAQFGYAKEALDLFARMRNLGVKPNHV 554
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 97/367 (26%), Positives = 176/367 (47%), Gaps = 18/367 (4%)
Query: 158 KNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSM 217
+N + N +I Y AR +FD M + R +SW ++I+ + NS +A +
Sbjct: 78 RNTILSNHLITMYGRCAAPDSARMVFDGM----LDRNPVSWAAVIAAHAQNSRCADAMGL 133
Query: 218 FRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYC 277
F +L R G P F GS + ACA++ L G+++HA AI V ALV MY
Sbjct: 134 FSSML-RLGTAPDEFALGSAVRACAELGDLGLGRQVHAQAIKSDNGGHLIVQNALVTMYS 192
Query: 278 RYQDLVAAQMAFDEIENIE-----NLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDL-TPD 331
+ + F+ I + + +++ + + G E +A+ +F EM++ + P+
Sbjct: 193 KSGSVGDGFALFERIRDKDLFSWGSIIAGLAQQGRE-----MDALHIFREMIAEGMHHPN 247
Query: 332 IYTVGIILSACS-SLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAY 390
+ G + ACS + ++E G+Q+H ++ D + + G +L DMYA+C L A +
Sbjct: 248 EFHFGSVFRACSVVINSLEYGEQIHGLCVKYKLDRNSYAGCSLGDMYARCNKLDSAMKVF 307
Query: 391 KRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIK 450
RI +PDLVS N+++ A++ G E + F + S +PD I+ ++ L ACV +++
Sbjct: 308 YRIESPDLVSWNSLINAFSADGLLSEAMVLFSEMRYSSLKPDGITVMALLCACVGCDALR 367
Query: 451 TGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGC 510
G + + + ++ + +R + A + + D V W ++L C
Sbjct: 368 QGRSIHSYLVKLGLGGDVMVCNSLISMYTRCLDFPSAMDVFHETN-DRDVVTWNSILTAC 426
Query: 511 VSHGNLE 517
V H ++E
Sbjct: 427 VQHRHME 433
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 99/416 (23%), Positives = 170/416 (40%), Gaps = 79/416 (18%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +C LD A KVF + D VSWNS++ A +A+GL+
Sbjct: 293 MYARCNKLDSAMKVFYRIESPDLVSWNSLINAFSADGLL--------------------- 331
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
EA+ + M+ L+P+ T+ ++L AC L G+ H Y+
Sbjct: 332 ---------------SEAMVLFSEMRYSSLKPDGITVMALLCACVGCDALRQGRSIHSYL 376
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G + V N L+ +Y RC D SA+ +F + + ++ V+ N+I+
Sbjct: 377 VKLGLGGDVMVCNSLISMYTRCLDFPSAMDVFHETNDRDVVTWNSILTACV--------- 427
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
Q H+ ++ F +FR LL + +VL A
Sbjct: 428 ----QHRHM----------------------EDVFKLFR-LLHSSMPSLDRISLNNVLSA 460
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
A++ K++HA A +GL SD + AL++ Y + L A F+ + ++
Sbjct: 461 SAELGYFEMAKQVHAYAFKVGLVSDAILSNALIDTYAKCGSLDDANKLFEIMGTGRDVFS 520
Query: 301 -KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
G+ Y A+ LF+ M +L + P+ T +L ACS + ++ G + Y+I
Sbjct: 521 WSSLIVGYAQFGYAKEALDLFARMRNLGVKPNHVTFVGVLIACSRVGLVDEG--CYYYSI 578
Query: 360 ---RCGYDSDVHIGTALVDMYAKCGSLKH-ARLAYKRISTPDLVSQNAMLTAYAMH 411
G + ++D+ A+ G L A+ + PD++ N +L A H
Sbjct: 579 MEPEYGIVPTKEHCSCVIDLLARAGRLSEAAKFVDQMPFEPDIIMWNTLLAASRTH 634
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 131/283 (46%), Gaps = 8/283 (2%)
Query: 241 CADMNSLRKGKEIHA--LAIALG---LQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
C+ + S +G+ +H LA + G L +T + L+ MY R +A+M FD + +
Sbjct: 50 CSRLRSFPQGRLVHRHLLASSAGAAYLARNTILSNHLITMYGRCAAPDSARMVFDGMLDR 109
Query: 296 ENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVH 355
+ N +AM LFS ML L PD + +G + AC+ L + G+QVH
Sbjct: 110 NPVSWAAVIAAHAQNSRCADAMGLFSSMLRLGTAPDEFALGSAVRACAELGDLGLGRQVH 169
Query: 356 AYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGK 415
A AI+ + + ALV MY+K GS+ ++RI DL S +++ A G
Sbjct: 170 AQAIKSDNGGHLIVQNALVTMYSKSGSVGDGFALFERIRDKDLFSWGSIIAGLAQQGREM 229
Query: 416 EGIAHFRRILASGF-RPDHISFLSALSAC-VHAGSIKTGSEFFDLMAYYDVKPSLKHYTC 473
+ + FR ++A G P+ F S AC V S++ G + L Y + +
Sbjct: 230 DALHIFREMIAEGMHHPNEFHFGSVFRACSVVINSLEYGEQIHGLCVKYKLDRNSYAGCS 289
Query: 474 MVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNL 516
+ D+ +R +L A + +I +PD V W +L+ + G L
Sbjct: 290 LGDMYARCNKLDSAMKVFYRIE-SPDLVSWNSLINAFSADGLL 331
>gi|359495515|ref|XP_002265720.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25060, mitochondrial-like [Vitis vinifera]
Length = 678
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 184/600 (30%), Positives = 292/600 (48%), Gaps = 74/600 (12%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y + G ++ A++VF P+ +WN+++ A + G + EAL RM+S
Sbjct: 49 YARLGHIESARQVFDKSPQCGVDAWNAMIIAYSRRGAMFEALSLYHRMAS---------- 98
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
EG+ P++ T + VL AC R L G+E
Sbjct: 99 --------------------------EGVRPDSSTYTVVLKACTRSLDLRSGEETWRQAV 132
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
G+ + FV ++++Y +CG M A+++F K ++ V T+I G +NG EA +
Sbjct: 133 DQGYGDDVFVGAAVLNLYAKCGKMDEAMRVFDKMGRRDLVCWTTMITGLAQNGQAREAVD 192
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
++ QM + +E ++ AC
Sbjct: 193 IYRQMH------------------------------------KKRVEGDGVVMLGLIQAC 216
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK 301
+ + G IH I + D V +LV+MY + L A F + +
Sbjct: 217 TTLGHSKMGLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLELASCVFRRMLYKNVISWS 276
Query: 302 MKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRC 361
GF N + NA+QL +M S PD ++ +L ACS + ++ GK VH Y +R
Sbjct: 277 ALISGFAQNGFAGNALQLVVDMQSFGYKPDSVSLVSVLLACSQVGFLKLGKSVHGYIVR- 335
Query: 362 GYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHF 421
D TA++DMY+KCGSL AR + +IS D +S NA++ +Y +HG G+E ++ F
Sbjct: 336 RLHFDCVSSTAVIDMYSKCGSLSFARTVFDQISFRDSISWNAIIASYGIHGSGEEALSLF 395
Query: 422 RRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLLSR 480
++ + +PDH +F S LSA H+G ++ G +F +M Y ++PS KHY CMVDLLSR
Sbjct: 396 LQMRETNVKPDHATFASLLSAFSHSGLVEKGRYWFSIMVNEYKIQPSEKHYACMVDLLSR 455
Query: 481 AGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVML 540
AG + EA E I+ + P +W ALL GC++HG G++AA +++EL P++ G Y ++
Sbjct: 456 AGRVEEAQELIESMITEPGIAIWVALLSGCLNHGKFLIGEMAAKKVLELNPDDPGIYSLV 515
Query: 541 ANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTII 600
+N FA A RW ++A R+ MK M K PG S +E ++H F D+SH + EEI ++
Sbjct: 516 SNFFATARRWDEVAEVRKIMKKTGMKKVPGYSVMEVNGKLHAFLMEDKSHHQYEEIMQVL 575
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/390 (26%), Positives = 184/390 (47%), Gaps = 20/390 (5%)
Query: 166 IIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRD 225
+I Y G++ AR++FD+ GV +WN+MI Y EA S++ + +
Sbjct: 45 LIQSYARLGHIESARQVFDKSPQCGVD----AWNAMIIAYSRRGAMFEALSLYHRM-ASE 99
Query: 226 GIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAA 285
G+ P S T+ VL AC LR G+E A+ G D FVG A++ +Y + + A
Sbjct: 100 GVRPDSSTYTVVLKACTRSLDLRSGEETWRQAVDQGYGDDVFVGAAVLNLYAKCGKMDEA 159
Query: 286 QMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSL 345
FD++ + + G N A+ ++ +M + D + ++ AC++L
Sbjct: 160 MRVFDKMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKRVEGDGVVMLGLIQACTTL 219
Query: 346 ATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAML 405
+ G +H Y IR DV + T+LVDMYAK G L+ A ++R+ +++S +A++
Sbjct: 220 GHSKMGLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLELASCVFRRMLYKNVISWSALI 279
Query: 406 TAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA---YY 462
+ +A +G + + + G++PD +S +S L AC G +K G + ++
Sbjct: 280 SGFAQNGFAGNALQLVVDMQSFGYKPDSVSLVSVLLACSQVGFLKLGKSVHGYIVRRLHF 339
Query: 463 DVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIA 522
D S T ++D+ S+ G L A +I DS+ W A++ HG+ G+ A
Sbjct: 340 DCVSS----TAVIDMYSKCGSLSFARTVFDQISF-RDSISWNAIIASYGIHGS---GEEA 391
Query: 523 ADRLIELEPNNT----GNYVMLANLFAYAG 548
+++ N + L + F+++G
Sbjct: 392 LSLFLQMRETNVKPDHATFASLLSAFSHSG 421
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 107/447 (23%), Positives = 182/447 (40%), Gaps = 85/447 (19%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KCG +D+A +VF M RD LV
Sbjct: 149 LYAKCGKMDEAMRVFDKMGRRD------------------------------------LV 172
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
W+ +I G QNG EA+ + +M + +E + + ++ AC L +G HGY+
Sbjct: 173 CWTTMITGLAQNGQAREAVDIYRQMHKKRVEGDGVVMLGLIQACTTLGHSKMGLSIHGYM 232
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R + + V LVD+Y + G + A +F + KN +S + +I G+ +NG A
Sbjct: 233 IRKDIIMDVIVQTSLVDMYAKNGHLELASCVFRRMLYKNVISWSALISGFAQNGFAGNAL 292
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+L M+ G + P S + SVL+A
Sbjct: 293 QLVVDMQSFGYK------------------------------------PDSVSLVSVLLA 316
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C+ + L+ GK +H I L D A+++MY + L A+ FD+I +++
Sbjct: 317 CSQVGFLKLGKSVHGY-IVRRLHFDCVSSTAVIDMYSKCGSLSFARTVFDQISFRDSISW 375
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGK-----QVH 355
+ + A+ LF +M ++ PD T +LSA S +E+G+ V+
Sbjct: 376 NAIIASYGIHGSGEEALSLFLQMRETNVKPDHATFASLLSAFSHSGLVEKGRYWFSIMVN 435
Query: 356 AYAIRCGYDSDVHIGTALVDMYAKCGSLKHAR-LAYKRISTPDLVSQNAMLTAYAMHGHG 414
Y I+ S+ H +VD+ ++ G ++ A+ L I+ P + A+L+ HG
Sbjct: 436 EYKIQ---PSEKHYA-CMVDLLSRAGRVEEAQELIESMITEPGIAIWVALLSGCLNHGKF 491
Query: 415 KEGIAHFRRILASGFRPDHISFLSALS 441
G +++L PD S +S
Sbjct: 492 LIGEMAAKKVLE--LNPDDPGIYSLVS 516
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 126/284 (44%), Gaps = 4/284 (1%)
Query: 231 SFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFD 290
S + ++LI D ++ K IHAL I G+ L++ Y R + +A+ FD
Sbjct: 7 SKSLKTLLITSKDEPTIAK---IHALMILTGIFGHGNSNAKLIQSYARLGHIESARQVFD 63
Query: 291 EIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMER 350
+ + + A+ L+ M S + PD T ++L AC+ +
Sbjct: 64 KSPQCGVDAWNAMIIAYSRRGAMFEALSLYHRMASEGVRPDSSTYTVVLKACTRSLDLRS 123
Query: 351 GKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAM 410
G++ A+ GY DV +G A++++YAKCG + A + ++ DLV M+T A
Sbjct: 124 GEETWRQAVDQGYGDDVFVGAAVLNLYAKCGKMDEAMRVFDKMGRRDLVCWTTMITGLAQ 183
Query: 411 HGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKH 470
+G +E + +R++ D + L + AC G K G M D+ +
Sbjct: 184 NGQAREAVDIYRQMHKKRVEGDGVVMLGLIQACTTLGHSKMGLSIHGYMIRKDIIMDVIV 243
Query: 471 YTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
T +VD+ ++ G L A +++ + + + W AL+ G +G
Sbjct: 244 QTSLVDMYAKNGHLELASCVFRRM-LYKNVISWSALISGFAQNG 286
>gi|225438894|ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 628
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 159/439 (36%), Positives = 248/439 (56%), Gaps = 37/439 (8%)
Query: 195 IISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIH 254
+ W ++I G+ L+++A + + +L + G+EP +FTF S+L C + GK +H
Sbjct: 93 VFFWTAIIHGHALRGLHEQALNFYAQMLTQ-GVEPNAFTFSSILKLCP----IEPGKALH 147
Query: 255 ALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFD---------------------EIE 293
+ A+ LG SD +V L+++Y R D+V+AQ FD E++
Sbjct: 148 SQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELD 207
Query: 294 NIENLLGKMKE----------DGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACS 343
L M+E DG+ N A+ LF ML P+ TV +LSAC
Sbjct: 208 AARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACG 267
Query: 344 SLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNA 403
L +E G+ VH+Y G +VH+GTALVDMY+KCGSL+ ARL + +I D+V+ N+
Sbjct: 268 QLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNS 327
Query: 404 MLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YY 462
M+ YAMHG +E + F+ + G P +I+F+ LSAC H+G + G + F+ M Y
Sbjct: 328 MIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEY 387
Query: 463 DVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIA 522
++P ++HY CMV+LL RAG + +AYE +K + + PD V+WG LLG C HG + G+
Sbjct: 388 GIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKI 447
Query: 523 ADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHK 582
+ L++ N+G Y++L+N++A G W +AR R MKD + K PGCS IE +++H+
Sbjct: 448 VELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCSSIEVNNKVHE 507
Query: 583 FRASDRSHDRSEEIYTIID 601
F A +H + +EIY +++
Sbjct: 508 FLAGGLNHPKRKEIYMMLE 526
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 113/361 (31%), Positives = 184/361 (50%), Gaps = 11/361 (3%)
Query: 54 NETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLG 113
+ P++ W+A+I G G E+A+ +M +G+EPNA T SS+L C + G
Sbjct: 88 TQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTFSSILKLCP----IEPG 143
Query: 114 KEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCEN 173
K H + GF S+ +V GL+DVY R GD++SA ++F K+ VS ++ Y ++
Sbjct: 144 KALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKH 203
Query: 174 GNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFT 233
G + AR LFD ME +R + WN MI GY N + +EA +FR +L + +P T
Sbjct: 204 GELDAARVLFDGME----ERDGVCWNVMIDGYTQNGMPNEALVLFRRML-KAKAKPNEVT 258
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
SVL AC + +L G+ +H+ G+Q + VG ALV+MY + L A++ FD+I+
Sbjct: 259 VLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKID 318
Query: 294 NIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ 353
+ + + G+ + ++ A+QLF M + L P T ILSAC + G
Sbjct: 319 DKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWD 378
Query: 354 V-HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST-PDLVSQNAMLTAYAMH 411
+ + G + + +V++ + G ++ A K ++ PD V +L A +H
Sbjct: 379 IFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLH 438
Query: 412 G 412
G
Sbjct: 439 G 439
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 143/298 (47%), Gaps = 9/298 (3%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y + G + A+++F MPE+ VS +++T A +G + A + M D V
Sbjct: 168 VYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDG-----V 222
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
W+ +I G+TQNG EA+ + RM +PN T+ SVL AC +L L G+ H YI
Sbjct: 223 CWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYI 282
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
NG N V LVD+Y +CG + A +F K K+ V+ N++IVGY +G EA
Sbjct: 283 ENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEAL 342
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+LF M +G+ I++ ++S + E + +F + GIEP +G ++
Sbjct: 343 QLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNL 402
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
+ + E L + ++ D + G L+ CR +A E+ +NL
Sbjct: 403 LGRAGHVEQAYE---LVKNMNIEPDPVLWGTLLGA-CRLHGKIALGEKIVELLVDQNL 456
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 72/176 (40%), Gaps = 5/176 (2%)
Query: 353 QVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHG 412
Q+HA R G D + L YA G L ++ + R P + A++ +A+ G
Sbjct: 48 QIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRG 107
Query: 413 HGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYT 472
++ + + ++L G P+ +F S L C I+ G L T
Sbjct: 108 LHEQALNFYAQMLTQGVEPNAFTFSSILKLC----PIEPGKALHSQAVKLGFDSDLYVRT 163
Query: 473 CMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIE 528
++D+ +R G++ A + +P V A+L HG L+ ++ D + E
Sbjct: 164 GLLDVYARGGDVVSAQQLFDTMP-EKSLVSLTAMLTCYAKHGELDAARVLFDGMEE 218
>gi|356567222|ref|XP_003551820.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g39620-like [Glycine max]
Length = 887
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 186/576 (32%), Positives = 283/576 (49%), Gaps = 74/576 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG L AK+ F + RD LV
Sbjct: 372 MYAKCGELKKAKEFFLSLEGRD------------------------------------LV 395
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
WSA + Q GY EA+ + MQ EGL+P+ LSS++ ACA + LGK H Y+
Sbjct: 396 VWSAFLSALVQAGYPGEALSIFQEMQHEGLKPDKTILSSLVSACAEISSSRLGKMMHCYV 455
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ S+ V LV +Y RC + A+ +F++ K+
Sbjct: 456 IKADMGSDISVATTLVSMYTRCKSFMYAMTLFNRMHYKD--------------------- 494
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+++WN++I+G+ A MF L + G++P S T S+L A
Sbjct: 495 --------------VVAWNTLINGFTKCGDPRLALEMFLRLQL-SGVQPDSGTMVSLLSA 539
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA ++ L G H I G++S+ V AL++MY + L A+ F +++++ +
Sbjct: 540 CALLDDLYLGICFHGNIIKNGIESEMHVKVALIDMYAKCGSLCTAENLFHLNKHVKDEVS 599
Query: 301 -KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
+ G+ N A+ F++M + P++ T IL A S L+ + HA I
Sbjct: 600 WNVMIAGYLHNGCANEAISTFNQMKLESVRPNLVTFVTILPAVSYLSILREAMAFHACII 659
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
R G+ S IG +L+DMYAK G L ++ + + +S NAML+ YAMHG G+ +A
Sbjct: 660 RMGFISSTLIGNSLIDMYAKSGQLSYSEKCFHEMENKGTISWNAMLSGYAMHGQGEVALA 719
Query: 420 HFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLL 478
F + + D +S++S LSAC HAG I+ G F M ++++PS++HY CMVDLL
Sbjct: 720 LFSLMQETHVPVDSVSYISVLSACRHAGLIQEGRNIFQSMTEKHNLEPSMEHYACMVDLL 779
Query: 479 SRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYV 538
AG E I K+P PD+ +WGALLG C H N++ G+IA L++LEP N +Y+
Sbjct: 780 GCAGLFDEVLCLIDKMPTEPDAQVWGALLGACKMHSNVKLGEIALHHLLKLEPRNAVHYI 839
Query: 539 MLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWI 574
+L++++A GRW D RTR M D + K+PG SW+
Sbjct: 840 VLSDIYAQCGRWIDARRTRSNMTDHGLKKNPGYSWV 875
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 139/538 (25%), Positives = 236/538 (43%), Gaps = 83/538 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G LD+A+KVF MP +D +
Sbjct: 171 MYCKMGHLDNARKVFDKMPGKD------------------------------------VA 194
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQ-AEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
SW+A+I G +Q+ EA+ + RMQ EG+EP++ ++ ++ PA +RL+ + K HGY
Sbjct: 195 SWNAMISGLSQSSNPCEALEIFQRMQMEEGVEPDSVSILNLAPAVSRLEDVDSCKSIHGY 254
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ R V N L+D+Y +CG++ A +IF + +K+++S T++ GY +G E
Sbjct: 255 VVRRCVFG--VVSNSLIDMYSKCGEVKLAHQIFDQMWVKDDISWATMMAGYVHHGCYFEV 312
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
+L D+M+ R I+ + + ++
Sbjct: 313 LQLLDEMK------------------------------------RKHIKMNKISVVNSVL 336
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
A + L KGKE+H A+ LG+ SD V +V MY + +L A+ F +E + ++
Sbjct: 337 AATETRDLEKGKEVHNYALQLGMTSDIVVATPIVSMYAKCGELKKAKEFFLSLEGRDLVV 396
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
Y A+ +F EM L PD + ++SAC+ +++ GK +H Y I
Sbjct: 397 WSAFLSALVQAGYPGEALSIFQEMQHEGLKPDKTILSSLVSACAEISSSRLGKMMHCYVI 456
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
+ SD+ + T LV MY +C S +A + R+ D+V+ N ++ + G + +
Sbjct: 457 KADMGSDISVATTLVSMYTRCKSFMYAMTLFNRMHYKDVVAWNTLINGFTKCGDPRLALE 516
Query: 420 HFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLS 479
F R+ SG +PD + +S LSAC + G F + ++ + ++D+ +
Sbjct: 517 MFLRLQLSGVQPDSGTMVSLLSACALLDDLYLGICFHGNIIKNGIESEMHVKVALIDMYA 576
Query: 480 RAGELGEAYEFIKKIPMAPDSVMW-----GALLGGCVSHGNLEFGQIAADRLIELEPN 532
+ G L A D V W G L GC + F Q+ +L + PN
Sbjct: 577 KCGSLCTAENLFHLNKHVKDEVSWNVMIAGYLHNGCANEAISTFNQM---KLESVRPN 631
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 121/475 (25%), Positives = 212/475 (44%), Gaps = 46/475 (9%)
Query: 44 ECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPA 103
+C +S+ N P+L+ W+++I +++ +EAI M GLEP+ T + VL A
Sbjct: 79 QCTLAPNSITN--PSLILWNSLIRAYSRLHLFQEAIKSYQTMSYMGLEPDKYTFTFVLKA 136
Query: 104 CARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSC 163
C G H I + F+ GLVD+Y
Sbjct: 137 CTGALDFHEGVAIHQDIASRELECDVFIGTGLVDMY------------------------ 172
Query: 164 NTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLM 223
C+ G++ AR++FD+M + + SWN+MISG +S EA +F+ + M
Sbjct: 173 -------CKMGHLDNARKVFDKMP----GKDVASWNAMISGLSQSSNPCEALEIFQRMQM 221
Query: 224 RDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAI---ALGLQSDTFVGGALVEMYCRYQ 280
+G+EP S + ++ A + + + K IH + G+ V +L++MY +
Sbjct: 222 EEGVEPDSVSILNLAPAVSRLEDVDSCKSIHGYVVRRCVFGV-----VSNSLIDMYSKCG 276
Query: 281 DLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILS 340
++ A FD++ +++ G+ + + +QL EM + + +V +
Sbjct: 277 EVKLAHQIFDQMWVKDDISWATMMAGYVHHGCYFEVLQLLDEMKRKHIKMNKISVVNSVL 336
Query: 341 ACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVS 400
A + +E+GK+VH YA++ G SD+ + T +V MYAKCG LK A+ + + DLV
Sbjct: 337 AATETRDLEKGKEVHNYALQLGMTSDIVVATPIVSMYAKCGELKKAKEFFLSLEGRDLVV 396
Query: 401 QNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA 460
+A L+A G+ E ++ F+ + G +PD S +SAC S + G +
Sbjct: 397 WSAFLSALVQAGYPGEALSIFQEMQHEGLKPDKTILSSLVSACAEISSSRLGKMMHCYVI 456
Query: 461 YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
D+ + T +V + +R A ++ D V W L+ G G+
Sbjct: 457 KADMGSDISVATTLVSMYTRCKSFMYAMTLFNRMHY-KDVVAWNTLINGFTKCGD 510
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 73/175 (41%), Gaps = 10/175 (5%)
Query: 383 LKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSA 442
++ LA I+ P L+ N+++ AY+ +E I ++ + G PD +F L A
Sbjct: 77 VQQCTLAPNSITNPSLILWNSLIRAYSRLHLFQEAIKSYQTMSYMGLEPDKYTFTFVLKA 136
Query: 443 CVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVM 502
C A G +A +++ + T +VD+ + G L A + K+P D
Sbjct: 137 CTGALDFHEGVAIHQDIASRELECDVFIGTGLVDMYCKMGHLDNARKVFDKMP-GKDVAS 195
Query: 503 WGALLGGCVSHGN----LEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDL 553
W A++ G N LE Q +++E + V + NL R D+
Sbjct: 196 WNAMISGLSQSSNPCEALEIFQ-----RMQMEEGVEPDSVSILNLAPAVSRLEDV 245
>gi|357438977|ref|XP_003589765.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478813|gb|AES60016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 960
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 191/630 (30%), Positives = 306/630 (48%), Gaps = 75/630 (11%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG +D A+ VF + WNS++ + +AL+ RM D V
Sbjct: 190 MYVKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDE-----V 244
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ +I F+Q+G+ + + M M +G PN T SVL ACA L G H I
Sbjct: 245 SWNTLISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARI 304
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R + NGL+D+Y +CG + A ++F
Sbjct: 305 LRMEHSLDLVFGNGLIDMYAKCGCLDLAKRVFKSLR------------------------ 340
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+ +H ISWNS+I+G V L ++A +F + R + F ++L
Sbjct: 341 ----EHDH-------ISWNSLITGVVHFGLGEDALILFNQM-RRSSVVLDEFILPTILGV 388
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C+ + G+ +H I G+ S VG A++ MY + D A + F + + N +
Sbjct: 389 CSGPDYASTGELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVF-RLMPLRNTIS 447
Query: 301 KM-------------KEDGF-----EPNVYTWNAM--------------QLFSEMLSLDL 328
K G+ E N+ TWN+M +L+ M S +
Sbjct: 448 WTAMITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGV 507
Query: 329 TPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARL 388
PD T + AC+ LA ++ G QV +A + G +V + ++V MY++CG +K A+
Sbjct: 508 QPDWITFTTSIRACADLAIVKLGMQVVTHATKFGLSLNVSVANSIVTMYSRCGLIKEAKN 567
Query: 389 AYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGS 448
+ I DL+S NAML A+A +G G + I F +L + +P+HIS++S LS C H G
Sbjct: 568 TFDSIDDKDLISWNAMLAAFAQNGLGIKVIDTFEDMLKTECKPNHISYVSVLSGCSHMGL 627
Query: 449 IKTGSEFFDLMA-YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALL 507
+ G +FD M + + P+ +H++CMVDLL RAG L +A + I+ +P P++ +W ALL
Sbjct: 628 VAEGKHYFDSMTRVFGISPTNEHFSCMVDLLGRAGLLEQAKDLIEGMPFKPNATVWSALL 687
Query: 508 GGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHK 567
G C H +L + AA +L+EL+ + YV+L+N+++ +G ++A R+ MK + +
Sbjct: 688 GSCRVHHDLRLAETAAKKLMELDVEGSEGYVLLSNMYSESGELDNVADMRKLMKVKGIRT 747
Query: 568 SPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
S GCSWIE + +H F + SH + +E+Y
Sbjct: 748 SRGCSWIEVDNRVHVFTVDETSHPQIKEVY 777
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 134/549 (24%), Positives = 249/549 (45%), Gaps = 44/549 (8%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY CG DA +VF+ R+ +WN+++ A ++ + +A + + M + V
Sbjct: 52 MYSNCGLTHDAFQVFQETHHRNIFTWNTMIRALVSSSRMSDAEKLFDEMPV---RVKDSV 108
Query: 61 SWSAVIGGFTQNGYDE---EAIGMLFRMQAEGLEP-NARTLSSVLPACARLQKLSLGKEF 116
SW+ +I G++QNG+ E ++ R +G + + + +SV+ AC L L +
Sbjct: 109 SWTTMISGYSQNGFHSRSFETFSLMIRDTNDGGKNYDPFSFTSVMKACGSLGDSRLAIQL 168
Query: 117 HGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNV 176
H +++ GF + N +V +Y +CGD+ A +F + N++I GY +
Sbjct: 169 HALVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQMYGP 228
Query: 177 AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGS 236
+A ++F++M +R +SWN++IS + + + +MF ++ G P T+GS
Sbjct: 229 YKALQIFNRMP----ERDEVSWNTLISIFSQHGFGVQCLAMFVEMC-NQGFSPNFMTYGS 283
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
VL ACA + L+ G +HA + + D G L++MY + L A+ F + +
Sbjct: 284 VLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKCGCLDLAKRVFKSLREHD 343
Query: 297 NLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHA 356
++ G +A+ LF++M + D + + IL CS G+ +H
Sbjct: 344 HISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTILGVCSGPDYASTGELLHG 403
Query: 357 YAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYK------------------------- 391
Y I+ G S +G A++ MYAKCG A L ++
Sbjct: 404 YTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLRNTISWTAMITAFSRSGDIGK 463
Query: 392 ------RISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVH 445
+ ++V+ N+ML+ Y +G +EG+ + + ++G +PD I+F +++ AC
Sbjct: 464 ARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQPDWITFTTSIRACAD 523
Query: 446 AGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGA 505
+K G + + + ++ +V + SR G + EA I D + W A
Sbjct: 524 LAIVKLGMQVVTHATKFGLSLNVSVANSIVTMYSRCGLIKEAKNTFDSID-DKDLISWNA 582
Query: 506 LLGGCVSHG 514
+L +G
Sbjct: 583 MLAAFAQNG 591
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 121/474 (25%), Positives = 214/474 (45%), Gaps = 70/474 (14%)
Query: 112 LGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYC 171
+ ++ H + +G S+ F++N L+ +Y CG A ++F + +N + NT+I
Sbjct: 26 IARKLHAQLILSGLDSSLFLLNNLLHMYSNCGLTHDAFQVFQETHHRNIFTWNTMIRALV 85
Query: 172 ENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRD----GI 227
+ +++A +LFD+M + V+ +SW +MISGY N + +F F L++RD G
Sbjct: 86 SSSRMSDAEKLFDEMP-VRVKDS-VSWTTMISGYSQNGFHSRSFETF-SLMIRDTNDGGK 142
Query: 228 EPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQM 287
F+F SV+ AC + R ++HAL LG +T + ++V MY + D+ A+
Sbjct: 143 NYDPFSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAET 202
Query: 288 AFDEIEN------------IENLLGKMKEDGF-----EPNVYTWNA-------------- 316
F +IE + G K E + +WN
Sbjct: 203 VFFDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQC 262
Query: 317 MQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDM 376
+ +F EM + +P+ T G +LSAC+S + ++ G +HA +R + D+ G L+DM
Sbjct: 263 LAMFVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDM 322
Query: 377 YAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISF 436
YAKCG L A+ +K + D +S N+++T G G++ + F ++ S D
Sbjct: 323 YAKCGCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFIL 382
Query: 437 LSALSAC-----------VHAGSIKTG--------------------SEFFDLMAYYDVK 465
+ L C +H +IK+G ++ DL+
Sbjct: 383 PTILGVCSGPDYASTGELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLMPL 442
Query: 466 PSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFG 519
+ +T M+ SR+G++G+A + +P + V W ++L V +G E G
Sbjct: 443 RNTISWTAMITAFSRSGDIGKARGYFDMMP-ERNIVTWNSMLSTYVQNGFSEEG 495
>gi|224091973|ref|XP_002309422.1| predicted protein [Populus trichocarpa]
gi|222855398|gb|EEE92945.1| predicted protein [Populus trichocarpa]
Length = 582
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 171/519 (32%), Positives = 271/519 (52%), Gaps = 37/519 (7%)
Query: 85 MQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGD 144
M G PNA T + +CA L GK+ H ++ + G + PFV L+ +Y +C
Sbjct: 1 MLRSGASPNAFTFPFAIKSCAALSLPITGKQLHCHVFKTGCLLEPFVQTSLISMYGKCSL 60
Query: 145 MLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISG 204
+ AR+LFD E+ ++ + +NS++SG
Sbjct: 61 -------------------------------IDNARKLFD--ENPQSRKLTVCYNSLLSG 87
Query: 205 YVDNSLYDEAFSMFRDLLMRD-GIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQ 263
Y NS + +F + MR+ G+E T ++ C +L G +H + GL
Sbjct: 88 YALNSRVKDVVVLFCE--MRELGVEINGVTMLGLVQPCGIPGNLGLGMCVHGFCVKFGLD 145
Query: 264 SDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEM 323
D+ VG L+ MY + ++ + FDE+ + +G+ N N ++L+ EM
Sbjct: 146 MDSSVGNCLLTMYVKSGEIDCGRKLFDEMPRKGLITWNAMINGYAQNGLANNVLELYKEM 205
Query: 324 LSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSL 383
S PD T+ +LS+C+ L + GK+V G+ S+ + ALV+MYA+CG+L
Sbjct: 206 ESKGFCPDPLTLVGVLSSCAHLGALSVGKEVERKMEGFGFSSNPFLNNALVNMYARCGNL 265
Query: 384 KHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSAC 443
K AR + + +VS A++ Y MHG G+ + F ++ G +PD +F+S LSAC
Sbjct: 266 KKARDIFDGMPVKSVVSWTAIIGGYGMHGQGEVAVGLFDEMIRGGIKPDGTAFVSVLSAC 325
Query: 444 VHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVM 502
HAG G ++F +M Y ++P +HY+CMVDLL RAG L EA E I+ + + D +
Sbjct: 326 SHAGLTNKGLDYFGVMERKYGLRPGAEHYSCMVDLLGRAGRLNEARELIESMQVRADGAL 385
Query: 503 WGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKD 562
WGALLG C H N+E ++A +++IELEP NTG YV+L+N++ AG + R R M+
Sbjct: 386 WGALLGACKIHRNVELAELAFEQVIELEPTNTGYYVLLSNVYTEAGNLEGILRVRMLMRK 445
Query: 563 RRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
R++ K PGCS++E + +H F A DR+H ++ EIY ++
Sbjct: 446 RKLKKDPGCSYVEFKGRVHLFFAGDRNHPQTNEIYKKLN 484
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 140/296 (47%), Gaps = 39/296 (13%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G +D +K+F MP + L+
Sbjct: 157 MYVKSGEIDCGRKLFDEMPRK------------------------------------GLI 180
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+A+I G+ QNG + + M+++G P+ TL VL +CA L LS+GKE +
Sbjct: 181 TWNAMINGYAQNGLANNVLELYKEMESKGFCPDPLTLVGVLSSCAHLGALSVGKEVERKM 240
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
GF SNPF+ N LV++Y RCG++ A IF +K+ VS II GY +G A
Sbjct: 241 EGFGFSSNPFLNNALVNMYARCGNLKKARDIFDGMPVKSVVSWTAIIGGYGMHGQGEVAV 300
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LFD+M G++ ++ S++S L ++ F + + G+ P + + ++
Sbjct: 301 GLFDEMIRGGIKPDGTAFVSVLSACSHAGLTNKGLDYFGVMERKYGLRPGAEHYSCMVDL 360
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
L + +E L ++ +++D + GAL+ ++++ A++AF+++ +E
Sbjct: 361 LGRAGRLNEARE---LIESMQVRADGALWGALLGACKIHRNVELAELAFEQVIELE 413
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 91/392 (23%), Positives = 152/392 (38%), Gaps = 79/392 (20%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKC +D+A+K+F P+ + +T C
Sbjct: 54 MYGKCSLIDNARKLFDENPQ------SRKLTVC--------------------------- 80
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+++++ G+ N ++ + + M+ G+E N T+ ++ C L LG HG+
Sbjct: 81 -YNSLLSGYALNSRVKDVVVLFCEMRELGVEINGVTMLGLVQPCGIPGNLGLGMCVHGFC 139
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G + V N L+ +Y + G++ K+F + K ++ N +I GY +NG
Sbjct: 140 VKFGLDMDSSVGNCLLTMYVKSGEIDCGRKLFDEMPRKGLITWNAMINGYAQNGLANNVL 199
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
EL+ +ME G P T VL +
Sbjct: 200 ELYKEME------------------------------------SKGFCPDPLTLVGVLSS 223
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA + +L GKE+ G S+ F+ ALV MY R +L A+ FD + +
Sbjct: 224 CAHLGALSVGKEVERKMEGFGFSSNPFLNNALVNMYARCGNLKKARDIFDGMPVKSVVSW 283
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV-----H 355
G+ + A+ LF EM+ + PD +LSACS +G
Sbjct: 284 TAIIGGYGMHGQGEVAVGLFDEMIRGGIKPDGTAFVSVLSACSHAGLTNKGLDYFGVMER 343
Query: 356 AYAIRCGYDSDVHIGTALVDMYAKCGSLKHAR 387
Y +R G + + +VD+ + G L AR
Sbjct: 344 KYGLRPGAEHY----SCMVDLLGRAGRLNEAR 371
>gi|356557599|ref|XP_003547103.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31070,
mitochondrial-like [Glycine max]
Length = 601
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 179/583 (30%), Positives = 294/583 (50%), Gaps = 85/583 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K + A++VF MP RD ++WNS
Sbjct: 95 MYFKFSDVGSARQVFDTMPHRDPITWNS-------------------------------- 122
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+I G+ NGY EEA+ L + GL P L+SV+ C R +G++ H +
Sbjct: 123 ----LINGYLHNGYLEEALEALNDVYLLGLVPKPELLASVVSMCGRRMGSKIGRQIHALV 178
Query: 121 TRNGFMSNP-FVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
N + F+ LVD Y RCGD L AL++F +KN
Sbjct: 179 VVNERIGQSMFLSTALVDFYFRCGDSLMALRVFDGMEVKN-------------------- 218
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
++SW +MISG + + YDEAF+ FR + +G+ P T ++L
Sbjct: 219 ---------------VVSWTTMISGCIAHQDYDEAFACFRAM-QAEGVCPNRVTSIALLS 262
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCR------YQDLVAAQMAFDEIE 293
ACA+ ++ GKEIH A G +S ALV MYC+ +L+ +F ++
Sbjct: 263 ACAEPGFVKHGKEIHGYAFRHGFESCPSFSSALVNMYCQCGEPMHLAELIFEGSSFRDVV 322
Query: 294 NIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ 353
+++G G ++ A++LF++M + ++ P+ T+ ++SAC++L++++ G
Sbjct: 323 LWSSIIGSFSRRG-----DSFKALKLFNKMRTEEIEPNYVTLLAVISACTNLSSLKHGCG 377
Query: 354 VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGH 413
+H Y + G+ + +G AL++MYAKCG L +R + + D V+ +++++AY +HG
Sbjct: 378 LHGYIFKFGFCFSISVGNALINMYAKCGCLNGSRKMFLEMPNRDNVTWSSLISAYGLHGC 437
Query: 414 GKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFF-DLMAYYDVKPSLKHYT 472
G++ + F + G +PD I+FL+ LSAC HAG + G F + A ++ +++HY
Sbjct: 438 GEQALQIFYEMNERGVKPDAITFLAVLSACNHAGLVAEGQRIFKQVRADCEIPLTIEHYA 497
Query: 473 CMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPN 532
C+VDLL R+G+L A E + +PM P + +W +L+ C HG L+ ++ A +LI EPN
Sbjct: 498 CLVDLLGRSGKLEYALEIRRTMPMKPSARIWSSLVSACKLHGRLDIAEMLAPQLIRSEPN 557
Query: 533 NTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIE 575
N GNY +L ++A G W D + R+ MK +++ K G S IE
Sbjct: 558 NAGNYTLLNTIYAEHGHWLDTEQVREAMKLQKLKKCYGFSRIE 600
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 107/471 (22%), Positives = 204/471 (43%), Gaps = 51/471 (10%)
Query: 52 LDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLS 111
L P S S I F G + + + + G + L SV+ A + Q +
Sbjct: 9 LTTVAPTCSSPSNQIKSFLSKGLYHQTLQLFSELHLCGHSSISFFLPSVIKASSSAQCHT 68
Query: 112 LGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYC 171
G + H + G S V N ++ +Y + D+ SA ++F ++ ++ N++I GY
Sbjct: 69 FGTQLHCLALKTGSHSETVVSNSIITMYFKFSDVGSARQVFDTMPHRDPITWNSLINGYL 128
Query: 172 ENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTS 231
NG + EA E + + L G+ P
Sbjct: 129 HNGYLEEALEALNDVYLL------------------------------------GLVPKP 152
Query: 232 FTFGSVLIACADMNSLRKGKEIHALAIA-LGLQSDTFVGGALVEMYCRYQDLVAAQMAFD 290
SV+ C + G++IHAL + + F+ ALV+ Y R D + A FD
Sbjct: 153 ELLASVVSMCGRRMGSKIGRQIHALVVVNERIGQSMFLSTALVDFYFRCGDSLMALRVFD 212
Query: 291 --EIENIEN----LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSS 344
E++N+ + + G + ++ + AMQ + + P+ T +LSAC+
Sbjct: 213 GMEVKNVVSWTTMISGCIAHQDYDEAFACFRAMQ------AEGVCPNRVTSIALLSACAE 266
Query: 345 LATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKH-ARLAYKRISTPDLVSQNA 403
++ GK++H YA R G++S +ALV+MY +CG H A L ++ S D+V ++
Sbjct: 267 PGFVKHGKEIHGYAFRHGFESCPSFSSALVNMYCQCGEPMHLAELIFEGSSFRDVVLWSS 326
Query: 404 MLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYD 463
++ +++ G + + F ++ P++++ L+ +SAC + S+K G + +
Sbjct: 327 IIGSFSRRGDSFKALKLFNKMRTEEIEPNYVTLLAVISACTNLSSLKHGCGLHGYIFKFG 386
Query: 464 VKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
S+ ++++ ++ G L + + ++P D+V W +L+ HG
Sbjct: 387 FCFSISVGNALINMYAKCGCLNGSRKMFLEMP-NRDNVTWSSLISAYGLHG 436
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/363 (24%), Positives = 163/363 (44%), Gaps = 14/363 (3%)
Query: 197 SWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHAL 256
S ++ I ++ LY + +F +L + G SF SV+ A + G ++H L
Sbjct: 18 SPSNQIKSFLSKGLYHQTLQLFSELHL-CGHSSISFFLPSVIKASSSAQCHTFGTQLHCL 76
Query: 257 AIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNA 316
A+ G S+T V +++ MY ++ D+ +A+ FD + + + + +G+ N Y A
Sbjct: 77 ALKTGSHSETVVSNSIITMYFKFSDVGSARQVFDTMPHRDPITWNSLINGYLHNGYLEEA 136
Query: 317 MQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI---RCGYDSDVHIGTAL 373
++ +++ L L P + ++S C + G+Q+HA + R G + + TAL
Sbjct: 137 LEALNDVYLLGLVPKPELLASVVSMCGRRMGSKIGRQIHALVVVNERIG--QSMFLSTAL 194
Query: 374 VDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDH 433
VD Y +CG A + + ++VS M++ H E A FR + A G P+
Sbjct: 195 VDFYFRCGDSLMALRVFDGMEVKNVVSWTTMISGCIAHQDYDEAFACFRAMQAEGVCPNR 254
Query: 434 ISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKK 493
++ ++ LSAC G +K G E + + + +V++ + GE E I +
Sbjct: 255 VTSIALLSACAEPGFVKHGKEIHGYAFRHGFESCPSFSSALVNMYCQCGEPMHLAELIFE 314
Query: 494 IPMAPDSVMWGALLGGCVSHGNLEFGQIA---ADRLIELEPNNTGNYVMLANLFAYAGRW 550
D V+W +++G G+ F + R E+EP NYV L + +
Sbjct: 315 GSSFRDVVLWSSIIGSFSRRGD-SFKALKLFNKMRTEEIEP----NYVTLLAVISACTNL 369
Query: 551 SDL 553
S L
Sbjct: 370 SSL 372
>gi|297838697|ref|XP_002887230.1| hypothetical protein ARALYDRAFT_476061 [Arabidopsis lyrata subsp.
lyrata]
gi|297333071|gb|EFH63489.1| hypothetical protein ARALYDRAFT_476061 [Arabidopsis lyrata subsp.
lyrata]
Length = 1347
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 201/666 (30%), Positives = 318/666 (47%), Gaps = 104/666 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMP-----------------------------------ERDCVS 25
MYG+ G+L DA+KVF MP E D V+
Sbjct: 703 MYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENCEVLKALRMFKCMVDDGVEPDAVT 762
Query: 26 WNSVVTACA--------------------------ANGLVLEALECLERMSSLDN----E 55
SVV CA N L+ +C + +SS
Sbjct: 763 MISVVEGCAELGCLRIARSVHGQITRKMFDFDETLCNSLLTMYSKCGDLLSSEKIFEKIA 822
Query: 56 TPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKE 115
N VSW+A+I + + + E+A+ M G+EPN TL S+L +C + GK
Sbjct: 823 KKNAVSWTAMISSYNRGEFSEKALRSFSEMLKSGIEPNLVTLYSILSSCGLNGLIREGKS 882
Query: 116 FHGYITRNGFMSN-PFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
HG+ R N + LV++Y CG + C TI+
Sbjct: 883 VHGFAIRRELDPNYESLSPALVELYAECGRL---------------GDCETIL------- 920
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTF 234
H+ R I+ WNS IS Y + EA +FR ++ I+P SFT
Sbjct: 921 -------------HVVGDRNIVLWNSHISLYAHRGMVIEALCLFRQMVTWR-IKPDSFTL 966
Query: 235 GSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIEN 294
S++ AC + +R GK+IH I + SD FV ++++MY + + A FD+I++
Sbjct: 967 ASIISACENTGLVRLGKQIHGHVIRTDV-SDEFVQNSVIDMYSKSGFVNLACTVFDQIKH 1025
Query: 295 IENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV 354
+ GF N + A+ LF M L + T ++ ACSS+ ++E+G+ V
Sbjct: 1026 RSIVTWNSMLCGFSQNGNSLEAINLFDYMYHSCLEINKVTFLAVIQACSSIGSLEKGRWV 1085
Query: 355 HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHG 414
H I CG D+ TAL+DMYAKCG L A ++ +S +VS ++M+ AY MHG
Sbjct: 1086 HHKLIVCGI-KDLFTDTALIDMYAKCGDLNTAETVFRAMSNRSIVSWSSMINAYGMHGRI 1144
Query: 415 KEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCM 474
I+ F +++ SG +P+ + F++ LSAC H+GS++ G +F+LM + V P+ +H+ C
Sbjct: 1145 GSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKLFGVSPNSEHFACF 1204
Query: 475 VDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNT 534
+DLLSR+G+L EAY IK++P D+ +WG+L+ GC H ++ + + + ++ ++T
Sbjct: 1205 IDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDISDIVTDDT 1264
Query: 535 GNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSE 594
G Y +L+N++A G W + R R MK + K PG S IE ++ +F A + + ++E
Sbjct: 1265 GYYTLLSNIYAEEGEWEEFRRMRSAMKSLNLKKVPGYSAIEIDKKVFRFGAGEETCFQTE 1324
Query: 595 EIYTII 600
EIY +
Sbjct: 1325 EIYMFL 1330
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 110/442 (24%), Positives = 203/442 (45%), Gaps = 40/442 (9%)
Query: 76 EEAIGMLFRMQAEGLEPNARTLSSVLPACA-RLQKLSLGKEFHGYITRNGFMSNPFVVNG 134
+ AI + R+ +E + + SVL ACA + LS+G++ HG I ++G + +
Sbjct: 640 DAAIDLYHRLVSEKTQISKFVFPSVLRACAGSREHLSVGRKVHGRIIKSGVDDDAVIETS 699
Query: 135 LVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRG 194
L+ +Y + G++ A K+F +++ V+ +T++ EN V +A +F M
Sbjct: 700 LLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENCEVLKALRMFKCM-------- 751
Query: 195 IISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIH 254
VD DG+EP + T SV+ CA++ LR + +H
Sbjct: 752 -----------VD-----------------DGVEPDAVTMISVVEGCAELGCLRIARSVH 783
Query: 255 ALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTW 314
D + +L+ MY + DL++++ F++I + + ++
Sbjct: 784 GQITRKMFDFDETLCNSLLTMYSKCGDLLSSEKIFEKIAKKNAVSWTAMISSYNRGEFSE 843
Query: 315 NAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVH-IGTAL 373
A++ FSEML + P++ T+ ILS+C + GK VH +AIR D + + AL
Sbjct: 844 KALRSFSEMLKSGIEPNLVTLYSILSSCGLNGLIREGKSVHGFAIRRELDPNYESLSPAL 903
Query: 374 VDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDH 433
V++YA+CG L + ++V N+ ++ YA G E + FR+++ +PD
Sbjct: 904 VELYAECGRLGDCETILHVVGDRNIVLWNSHISLYAHRGMVIEALCLFRQMVTWRIKPDS 963
Query: 434 ISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKK 493
+ S +SAC + G ++ G + + DV + ++D+ S++G + A +
Sbjct: 964 FTLASIISACENTGLVRLGKQIHGHVIRTDVSDEFVQNS-VIDMYSKSGFVNLACTVFDQ 1022
Query: 494 IPMAPDSVMWGALLGGCVSHGN 515
I V W ++L G +GN
Sbjct: 1023 IKHR-SIVTWNSMLCGFSQNGN 1043
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 140/298 (46%), Gaps = 4/298 (1%)
Query: 210 LYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACA-DMNSLRKGKEIHALAIALGLQSDTFV 268
L D A ++ L+ + + + F F SVL ACA L G+++H I G+ D +
Sbjct: 638 LLDAAIDLYHRLV-SEKTQISKFVFPSVLRACAGSREHLSVGRKVHGRIIKSGVDDDAVI 696
Query: 269 GGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDL 328
+L+ MY + +L A+ FD + + + N A+++F M+ +
Sbjct: 697 ETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENCEVLKALRMFKCMVDDGV 756
Query: 329 TPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARL 388
PD T+ ++ C+ L + + VH R +D D + +L+ MY+KCG L +
Sbjct: 757 EPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDFDETLCNSLLTMYSKCGDLLSSEK 816
Query: 389 AYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGS 448
+++I+ + VS AM+++Y ++ + F +L SG P+ ++ S LS+C G
Sbjct: 817 IFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMLKSGIEPNLVTLYSILSSCGLNGL 876
Query: 449 IKTGSEFFDLMAYYDVKPSLKHYT-CMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGA 505
I+ G ++ P+ + + +V+L + G LG+ E I + + V+W +
Sbjct: 877 IREGKSVHGFAIRRELDPNYESLSPALVELYAECGRLGDC-ETILHVVGDRNIVLWNS 933
>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
Length = 736
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 177/545 (32%), Positives = 285/545 (52%), Gaps = 45/545 (8%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRM---QAEGLEPNARTLSSVLPACARLQKLSLGK 114
LV+W+A+I G+++NG A+ + M EG++P+A T SS L AC+ + +S G+
Sbjct: 124 TLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDISQGR 183
Query: 115 EFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
E +G+ S+ V N L+++Y +CG + SA
Sbjct: 184 EIEARTVASGYASDSIVQNALINMYSKCGSLESA-------------------------- 217
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTF 234
R++FD++++ R +I+WN+MISGY +A +F+ + D +P TF
Sbjct: 218 -----RKVFDRLKN----RDVIAWNTMISGYAKQGAATQALELFQRMGPNDP-KPNVVTF 267
Query: 235 GSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCR-YQDLVAAQMAFDEIE 293
+L AC ++ L +G+ IH G +SD +G L+ MY + L A+ F+ +
Sbjct: 268 IGLLTACTNLEDLEQGRAIHRKVKEHGYESDLVIGNVLLNMYTKCSSSLEEARQVFERLR 327
Query: 294 NIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ 353
+ + + + +A+ +F +M ++ P+ T+ +LSAC+ L +GK
Sbjct: 328 TRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKA 387
Query: 354 VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGH 413
VHA +DV + +L++MY +CGSL + I LVS + ++ AYA HGH
Sbjct: 388 VHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGH 447
Query: 414 GKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSE-FFDLMAYYDVKPSLKHYT 472
+ G+ HF +L G D ++ +S LSAC H G +K G + F ++ + + P +H+
Sbjct: 448 SRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQSFLSMVGDHGLAPDYRHFL 507
Query: 473 CMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPN 532
CMVDLLSRAG L A I +P PD+V W +LL GC H + + AD+L ELE
Sbjct: 508 CMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFELESE 567
Query: 533 NTGNYV-MLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHD 591
+ + V +L+N++A AGRW D+ +TR + R K+PGCS+IE D +H+F A D+SH
Sbjct: 568 DEHSTVTLLSNVYAEAGRWDDVRKTRNR---RAARKNPGCSYIEINDTVHEFVAGDKSHP 624
Query: 592 RSEEI 596
E I
Sbjct: 625 EEELI 629
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 138/523 (26%), Positives = 240/523 (45%), Gaps = 76/523 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKCGS+ DA VF + E PN V
Sbjct: 1 MYGKCGSVADALAVFHAI------------------------------------EHPNSV 24
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ ++ F +NG+ EA+G RM EGL P+ + C+ + L G+ H I
Sbjct: 25 SWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMFVVAIGVCSSSKDLKQGQLLHAMI 84
Query: 121 TRNGFMSNPFVV-NGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ ++ L+ +Y RC D+ A
Sbjct: 85 LETQLLEFDIILGTALITMYARCRDL-------------------------------ELA 113
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMR--DGIEPTSFTFGSV 237
R+ FD+M ++ +++WN++I+GY N + A +++D++ + +G++P + TF S
Sbjct: 114 RKTFDEMG----KKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSA 169
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
L AC+ + + +G+EI A +A G SD+ V AL+ MY + L +A+ FD ++N +
Sbjct: 170 LYACSVVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDV 229
Query: 298 LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAY 357
+ G+ A++LF M D P++ T +L+AC++L +E+G+ +H
Sbjct: 230 IAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRK 289
Query: 358 AIRCGYDSDVHIGTALVDMYAKC-GSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKE 416
GY+SD+ IG L++MY KC SL+ AR ++R+ T D+++ N ++ AY +G K+
Sbjct: 290 VKEHGYESDLVIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKD 349
Query: 417 GIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVD 476
+ F+++ P+ I+ + LSAC G+ + G L+A K + +++
Sbjct: 350 ALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMN 409
Query: 477 LLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFG 519
+ +R G L + I V W L+ HG+ G
Sbjct: 410 MYNRCGSLDDTVGVFAAI-RDKSLVSWSTLIAAYAQHGHSRTG 451
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/420 (23%), Positives = 173/420 (41%), Gaps = 75/420 (17%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGSL+ A+KVF + RD ++WN++++ A G +ALE +RM D
Sbjct: 207 MYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDP------ 260
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+PN T +L AC L+ L G+ H +
Sbjct: 261 ------------------------------KPNVVTFIGLLTACTNLEDLEQGRAIHRKV 290
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDML-SALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+G+ S+ + N L+++Y +C L A ++F + ++ ++ N +IV Y + G +A
Sbjct: 291 KEHGYESDLVIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDA 350
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
++F QM+ + + P T +VL
Sbjct: 351 LDIFKQMQ------------------------------------LENVAPNEITLSNVLS 374
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
ACA + + R+GK +HAL + ++D + +L+ MY R L F I + +
Sbjct: 375 ACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVS 434
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
+ + ++ ++ F E+L L D T+ LSACS ++ G Q +
Sbjct: 435 WSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQSFLSMV 494
Query: 360 -RCGYDSDVHIGTALVDMYAKCGSLKHAR-LAYKRISTPDLVSQNAMLTAYAMHGHGKEG 417
G D +VD+ ++ G L+ A L + PD V+ ++L+ +H K
Sbjct: 495 GDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRA 554
>gi|224091821|ref|XP_002309359.1| predicted protein [Populus trichocarpa]
gi|222855335|gb|EEE92882.1| predicted protein [Populus trichocarpa]
Length = 605
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 183/551 (33%), Positives = 290/551 (52%), Gaps = 62/551 (11%)
Query: 65 VIGGFTQNGYDEEAIGMLFRMQ-AEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRN 123
+I GF +N E++I + M G + T+ +VLPA A LQ+L LG + +
Sbjct: 1 MISGFVKNSCFEDSIRVFGDMVLGNGPRFDLTTVIAVLPAVAELQELKLGMQILCLAIKC 60
Query: 124 GFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELF 183
GF S+ ++ GL+ ++ +CG+ V AR LF
Sbjct: 61 GFYSHVSLLTGLISLFSKCGE-------------------------------VEIARLLF 89
Query: 184 DQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRD---------GIEPTSFTF 234
++ ++ +IS N+MISG+ N +++ +F++LL G+ P F
Sbjct: 90 GEIR----KKDLISCNAMISGFTCNGETEDSVRLFKELLSSGERVSSSTIVGLIPVYSPF 145
Query: 235 G-SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
G S L C IH + LG+ S + V AL +YCR +++ A+ FDE
Sbjct: 146 GHSYLCNC-----------IHGFCVKLGIVSHSSVSTALTTVYCRLNEMIFARQLFDE-- 192
Query: 294 NIENLLGKMKE--DGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG 351
+ E L G N T A+ LF M ++ P+ TV ILSAC+ + + G
Sbjct: 193 SAEKTLASWNAMISGCTQNGLTDAAISLFQTMQKNNVNPNPVTVTSILSACAQIGALSLG 252
Query: 352 KQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMH 411
+ VH+ ++S+V++ TAL+DMYAKCGS+ AR + + + V+ NAM++ Y +H
Sbjct: 253 EWVHSLIKSNRFESNVYVSTALIDMYAKCGSITVARELFDLMPEKNEVTWNAMISGYGLH 312
Query: 412 GHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKH 470
GHG+E + F +L+S +P ++FLS L AC HAG +K G F M + + +P +H
Sbjct: 313 GHGQEALKLFYDMLSSSVKPTGLTFLSVLYACSHAGLVKEGDGIFHTMVHDFGFEPLAEH 372
Query: 471 YTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELE 530
Y CMVD+L RAG+L +A EFIK +P+ P +WGALLG C+ H + +A+++L EL+
Sbjct: 373 YACMVDILGRAGQLKKALEFIKAMPVEPGPPVWGALLGACMIHKDTNLAHVASEKLFELD 432
Query: 531 PNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSH 590
P N G YV+++N+++ ++ A RQ K +R+ K+PGC+ IE H F + D+SH
Sbjct: 433 PENIGYYVLMSNIYSVERKYPQAASVRQVAKKKRLAKTPGCTLIEIGQVPHVFTSGDQSH 492
Query: 591 DRSEEIYTIID 601
+S+ IY +D
Sbjct: 493 PQSKAIYAELD 503
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 120/235 (51%), Gaps = 3/235 (1%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
L SW+A+I G TQNG + AI + MQ + PN T++S+L ACA++ LSLG+ H
Sbjct: 197 TLASWNAMISGCTQNGLTDAAISLFQTMQKNNVNPNPVTVTSILSACAQIGALSLGEWVH 256
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
I N F SN +V L+D+Y +CG + A ++F KNEV+ N +I GY +G+
Sbjct: 257 SLIKSNRFESNVYVSTALIDMYAKCGSITVARELFDLMPEKNEVTWNAMISGYGLHGHGQ 316
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
EA +LF M V+ +++ S++ L E +F ++ G EP + + +
Sbjct: 317 EALKLFYDMLSSSVKPTGLTFLSVLYACSHAGLVKEGDGIFHTMVHDFGFEPLAEHYACM 376
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI 292
+ L+K E A+ ++ V GAL+ ++D A +A +++
Sbjct: 377 VDILGRAGQLKKALE---FIKAMPVEPGPPVWGALLGACMIHKDTNLAHVASEKL 428
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 153/356 (42%), Gaps = 38/356 (10%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
+L+S +A+I GFT NG E+++ + + + G ++ T+ ++P + L H
Sbjct: 96 DLISCNAMISGFTCNGETEDSVRLFKELLSSGERVSSSTIVGLIPVYSPFGHSYLCNCIH 155
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
G+ + G +S+ V L VY R +M+ A ++F + + K S N +I G +NG
Sbjct: 156 GFCVKLGIVSHSSVSTALTTVYCRLNEMIFARQLFDESAEKTLASWNAMISGCTQNGLTD 215
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
A LF M+ ++ + P T S+
Sbjct: 216 AAISLFQTMQ------------------------------------KNNVNPNPVTVTSI 239
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
L ACA + +L G+ +H+L + +S+ +V AL++MY + + A+ FD +
Sbjct: 240 LSACAQIGALSLGEWVHSLIKSNRFESNVYVSTALIDMYAKCGSITVARELFDLMPEKNE 299
Query: 298 LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV-HA 356
+ G+ + + A++LF +MLS + P T +L ACS ++ G + H
Sbjct: 300 VTWNAMISGYGLHGHGQEALKLFYDMLSSSVKPTGLTFLSVLYACSHAGLVKEGDGIFHT 359
Query: 357 YAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST-PDLVSQNAMLTAYAMH 411
G++ +VD+ + G LK A K + P A+L A +H
Sbjct: 360 MVHDFGFEPLAEHYACMVDILGRAGQLKKALEFIKAMPVEPGPPVWGALLGACMIH 415
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 71/172 (41%), Gaps = 37/172 (21%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGS+ A+++F +MPE++ V+WN
Sbjct: 277 MYAKCGSITVARELFDLMPEKNEVTWN--------------------------------- 303
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKE-FHGY 119
A+I G+ +G+ +EA+ + + M + ++P T SVL AC+ + G FH
Sbjct: 304 ---AMISGYGLHGHGQEALKLFYDMLSSSVKPTGLTFLSVLYACSHAGLVKEGDGIFHTM 360
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYC 171
+ GF +VD+ R G + AL+ ++ ++G C
Sbjct: 361 VHDFGFEPLAEHYACMVDILGRAGQLKKALEFIKAMPVEPGPPVWGALLGAC 412
>gi|225432514|ref|XP_002277532.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial [Vitis vinifera]
Length = 694
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 188/607 (30%), Positives = 312/607 (51%), Gaps = 48/607 (7%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y KC + +A+ +F D VS N ++ +G + A E+M VS
Sbjct: 97 YVKCRLISNARSLFDTCSVLDPVSCNIMLAGYVKSGSLDNARHLFEKM-----PIKGCVS 151
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
++ ++ G QN EAIG+ M+ G+ PN TL+SV+ A + + + + H
Sbjct: 152 YTTMVMGLAQNNCWLEAIGVFKDMRFAGVIPNEVTLASVISAYSHVGGILNCRMLHALSF 211
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
+ G + V LV +Y C + +A +F + +N V+ N ++ GY ++G V AR+
Sbjct: 212 KLGLEALNIVATNLVHMYCVCSSLGNARVLFDEIPERNVVTWNVMLNGYSKSGLVDLARD 271
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
LF+++ + ++SW ++I GYV EA M+R +L R G+ P ++ AC
Sbjct: 272 LFERIP----AKDVVSWGTIIDGYVQIERLGEALRMYRSML-RTGVGPNEVMIVDLISAC 326
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAF-----DEIENIE 296
++ +G++ H + + G F+ ++ Y ++ A + F D + +
Sbjct: 327 GRTMAVSEGQQFHGIIVRTGFDCYDFIQATIIHFYAACGEINLAFLQFELGSKDHVSSWN 386
Query: 297 NLLGKMKEDGF------------EPNVYTWNAM--------------QLFSEMLSLDLTP 330
L+ +G E +V++W++M QLF EM++ + P
Sbjct: 387 ALISGFVRNGMIEQARQLFDEMPERDVFSWSSMISGYSQNEQPDLALQLFHEMVAGGVQP 446
Query: 331 DIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAY 390
+ T+ + SA ++L T+ G+ H Y + + ++ AL+DMYAKCGS+ A +
Sbjct: 447 NEITMVSVFSAIATLGTLMEGRWAHEYILSNSIPLNDNLNAALIDMYAKCGSITIALQLF 506
Query: 391 KRISTPDLVSQ----NAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHA 446
I D VS NA++ AMHGH + F ++ +P+ I+F+ LSAC HA
Sbjct: 507 YEIQ--DRVSSVSPWNAIICGLAMHGHANVSLKLFSQLQRVRIKPNSITFIGVLSACCHA 564
Query: 447 GSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGA 505
G + TG ++F M Y+++P++KHY CM+DLL RAG L EA E I+K+PM D V+WG
Sbjct: 565 GLVDTGEKYFKGMKNLYNIEPNIKHYGCMIDLLGRAGRLKEAAEMIRKMPMKADVVIWGT 624
Query: 506 LLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRM 565
LL C +HGN+E G+ AA+ L +L+ ++ V+L+N++A AGRW D R+ M+ +RM
Sbjct: 625 LLAACRTHGNVEIGERAAENLAKLDISHGAGRVLLSNIYADAGRWDDAFLVRRAMQSQRM 684
Query: 566 HKSPGCS 572
KSPGCS
Sbjct: 685 KKSPGCS 691
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 123/434 (28%), Positives = 214/434 (49%), Gaps = 40/434 (9%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY C SL +A+ +F +PER+ V+WN ++ + +GLV A + ER+ + D +V
Sbjct: 228 MYCVCSSLGNARVLFDEIPERNVVTWNVMLNGYSKSGLVDLARDLFERIPAKD-----VV 282
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW +I G+ Q EA+ M M G+ PN + ++ AC R +S G++FHG I
Sbjct: 283 SWGTIIDGYVQIERLGEALRMYRSMLRTGVGPNEVMIVDLISACGRTMAVSEGQQFHGII 342
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R GF F+ ++ Y CG++ A F S + S N +I G+ NG + +AR
Sbjct: 343 VRTGFDCYDFIQATIIHFYAACGEINLAFLQFELGSKDHVSSWNALISGFVRNGMIEQAR 402
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+LFD+M +R + SW+SMISGY N D A +F +++ G++P T SV A
Sbjct: 403 QLFDEMP----ERDVFSWSSMISGYSQNEQPDLALQLFHEMVA-GGVQPNEITMVSVFSA 457
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
A + +L +G+ H ++ + + + AL++MY + + A F EI++ +
Sbjct: 458 IATLGTLMEGRWAHEYILSNSIPLNDNLNAALIDMYAKCGSITIALQLFYEIQDRVS--- 514
Query: 301 KMKEDGFEPNVYTWNA--------------MQLFSEMLSLDLTPDIYTVGIILSACSSLA 346
+V WNA ++LFS++ + + P+ T +LSAC
Sbjct: 515 ---------SVSPWNAIICGLAMHGHANVSLKLFSQLQRVRIKPNSITFIGVLSACCHAG 565
Query: 347 TMERGKQVHAYAIRCGYDSDVHIG--TALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNA 403
++ G++ + ++ Y+ + +I ++D+ + G LK A +++ D+V
Sbjct: 566 LVDTGEK-YFKGMKNLYNIEPNIKHYGCMIDLLGRAGRLKEAAEMIRKMPMKADVVIWGT 624
Query: 404 MLTAYAMHGHGKEG 417
+L A HG+ + G
Sbjct: 625 LLAACRTHGNVEIG 638
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 122/503 (24%), Positives = 229/503 (45%), Gaps = 70/503 (13%)
Query: 96 TLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKF 155
TL S L +C+ L LS G++ H + ++G +SN FV N L+ Y +C + +A +F
Sbjct: 54 TLVSALKSCSSLLALSQGQQIHSLVFKSGLLSNIFVKNSLISFYVKCRLISNARSLFDTC 113
Query: 156 SIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAF 215
S+ + VSCN ++ GY ++G++ AR LF++M +G +S+ +M+ G N+ + EA
Sbjct: 114 SVLDPVSCNIMLAGYVKSGSLDNARHLFEKMP----IKGCVSYTTMVMGLAQNNCWLEAI 169
Query: 216 SMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEM 275
+F+D+ G+ P T SV+ A + + + + +HAL+ LGL++ V LV M
Sbjct: 170 GVFKDMRFA-GVIPNEVTLASVISAYSHVGGILNCRMLHALSFKLGLEALNIVATNLVHM 228
Query: 276 YCRYQDLVAAQMAFDEI--ENI-----------ENLLGKMKEDGFE----PNVYTW---- 314
YC L A++ FDEI N+ ++ L + D FE +V +W
Sbjct: 229 YCVCSSLGNARVLFDEIPERNVVTWNVMLNGYSKSGLVDLARDLFERIPAKDVVSWGTII 288
Query: 315 ----------NAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYD 364
A++++ ML + P+ + ++SAC + G+Q H +R G+D
Sbjct: 289 DGYVQIERLGEALRMYRSMLRTGVGPNEVMIVDLISACGRTMAVSEGQQFHGIIVRTGFD 348
Query: 365 SDVHIGTALVDMYAKCGS-------------------------------LKHARLAYKRI 393
I ++ YA CG ++ AR + +
Sbjct: 349 CYDFIQATIIHFYAACGEINLAFLQFELGSKDHVSSWNALISGFVRNGMIEQARQLFDEM 408
Query: 394 STPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGS 453
D+ S ++M++ Y+ + + F ++A G +P+ I+ +S SA G++ G
Sbjct: 409 PERDVFSWSSMISGYSQNEQPDLALQLFHEMVAGGVQPNEITMVSVFSAIATLGTLMEGR 468
Query: 454 EFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVM-WGALLGGCVS 512
+ + + + ++D+ ++ G + A + +I SV W A++ G
Sbjct: 469 WAHEYILSNSIPLNDNLNAALIDMYAKCGSITIALQLFYEIQDRVSSVSPWNAIICGLAM 528
Query: 513 HG--NLEFGQIAADRLIELEPNN 533
HG N+ + + + ++PN+
Sbjct: 529 HGHANVSLKLFSQLQRVRIKPNS 551
>gi|115476154|ref|NP_001061673.1| Os08g0375800 [Oryza sativa Japonica Group]
gi|27260973|dbj|BAC45090.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|40253357|dbj|BAD05289.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113623642|dbj|BAF23587.1| Os08g0375800 [Oryza sativa Japonica Group]
gi|215715200|dbj|BAG94951.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 696
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 184/610 (30%), Positives = 297/610 (48%), Gaps = 86/610 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KCG + DA++VF MPER N V
Sbjct: 137 VYAKCGRVRDARQVFDGMPER------------------------------------NTV 160
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVL-----PACARLQKLSLGKE 115
SW+A+I G+T++G A+ + M+ EGL P+ T +S+L P+C + +L
Sbjct: 161 SWNALIAGYTESGDMASALELFLEMEREGLAPDEATFASLLTAVEGPSCFLMHQL----- 215
Query: 116 FHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGN 175
HG I + G V+N + Y +CG +
Sbjct: 216 -HGKIVKYGSALGLTVLNAAITAYSQCG-------------------------------S 243
Query: 176 VAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFG 235
+ ++R +FD +G R +ISWN+M+ Y N + DEA F ++ G+ P ++F
Sbjct: 244 LKDSRRIFDG---IGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFT 300
Query: 236 SVLIACADM-NSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQD---LVAAQMAFDE 291
S++ +C++ + +G+ IH L I L+ T V AL+ MY RY + + A F+
Sbjct: 301 SIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCFNS 360
Query: 292 IENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG 351
+ + + G+ + + +A++ F M S ++ D Y L + S LA ++ G
Sbjct: 361 LVLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQLG 420
Query: 352 KQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMH 411
KQ+H I G+ S+ + ++L+ MY+K G + AR +++ V NAM+ YA H
Sbjct: 421 KQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNAMIFGYAQH 480
Query: 412 GHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKH 470
G + F +L DHI+F+ +++C HAG + GSE + M Y V ++H
Sbjct: 481 GQAENVDILFNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEILNTMETKYGVPLRMEH 540
Query: 471 YTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELE 530
Y C VDL RAG+L +A + I +P PD+++W LLG C HGN+E A L E
Sbjct: 541 YACGVDLYGRAGQLDKAKKLIDSMPFEPDAMVWMTLLGACRIHGNVELASDVASHLFVAE 600
Query: 531 PNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSH 590
P YV+L+++++ G WSD A ++ MK R + K PG SWIE ++E+H F A D+SH
Sbjct: 601 PRQHSTYVLLSSMYSGLGMWSDRATVQRVMKKRGLSKVPGWSWIEVKNEVHSFNAEDKSH 660
Query: 591 DRSEEIYTII 600
+ +EIY ++
Sbjct: 661 PKMDEIYEML 670
>gi|125603224|gb|EAZ42549.1| hypothetical protein OsJ_27115 [Oryza sativa Japonica Group]
Length = 696
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 184/610 (30%), Positives = 297/610 (48%), Gaps = 86/610 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KCG + DA++VF MPER N V
Sbjct: 137 VYAKCGRVRDARQVFDGMPER------------------------------------NTV 160
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVL-----PACARLQKLSLGKE 115
SW+A+I G+T++G A+ + M+ EGL P+ T +S+L P+C + +L
Sbjct: 161 SWNALIAGYTESGDMASALELFLEMEREGLAPDEATFASLLTAVEGPSCFLMHQL----- 215
Query: 116 FHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGN 175
HG I + G V+N + Y +CG +
Sbjct: 216 -HGKIVKYGSALGLTVLNAAITAYSQCG-------------------------------S 243
Query: 176 VAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFG 235
+ ++R +FD +G R +ISWN+M+ Y N + DEA F ++ G+ P ++F
Sbjct: 244 LKDSRRIFDG---IGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFT 300
Query: 236 SVLIACADM-NSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQD---LVAAQMAFDE 291
S++ +C++ + +G+ IH L I L+ T V AL+ MY RY + + A F+
Sbjct: 301 SIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCFNS 360
Query: 292 IENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG 351
+ + + G+ + + +A++ F M S ++ D Y L + S LA ++ G
Sbjct: 361 LVLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQLG 420
Query: 352 KQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMH 411
KQ+H I G+ S+ + ++L+ MY+K G + AR +++ V NAM+ YA H
Sbjct: 421 KQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNAMIFGYAQH 480
Query: 412 GHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKH 470
G + F +L DHI+F+ +++C HAG + GSE + M Y V ++H
Sbjct: 481 GQAENVDILFNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEILNTMETKYGVPLRMEH 540
Query: 471 YTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELE 530
Y C VDL RAG+L +A + I +P PD+++W LLG C HGN+E A L E
Sbjct: 541 YACGVDLYGRAGQLDKAKKLIDSMPFEPDAMVWMTLLGACRIHGNVELASDVASHLFVAE 600
Query: 531 PNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSH 590
P YV+L+++++ G WSD A ++ MK R + K PG SWIE ++E+H F A D+SH
Sbjct: 601 PRQHSTYVLLSSMYSGLGMWSDRATVQRVMKKRGLSKVPGWSWIEVKNEVHSFNAEDKSH 660
Query: 591 DRSEEIYTII 600
+ +EIY ++
Sbjct: 661 PKMDEIYEML 670
>gi|356546044|ref|XP_003541442.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Glycine max]
Length = 628
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 173/568 (30%), Positives = 292/568 (51%), Gaps = 74/568 (13%)
Query: 54 NETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLG 113
+ N+ +++A+I GF N + A+ + +M+ G+ P+ T V+ AC +
Sbjct: 92 HHNKNVFAYNALIAGFLANALPQRALALYNQMRHLGIAPDKFTFPCVIRACGDDDDGFVV 151
Query: 114 KEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCEN 173
+ HG + + G + FV + LV+ Y KF
Sbjct: 152 TKIHGLMFKVGLELDVFVGSALVNTYL-------------KFRF---------------- 182
Query: 174 GNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFT 233
V EA +F+++ R ++ WN+M++G+ ++EA +FR + +G+ P +T
Sbjct: 183 --VGEAYRVFEELP----VRDVVLWNAMVNGFAQIGRFEEALGVFRRM-GGNGVVPCRYT 235
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
VL + M G+ +H +G +S V AL++MY + + + A F+ ++
Sbjct: 236 VTGVLSIFSVMGDFDNGRAVHGFVTKMGYESGVVVSNALIDMYGKCKCVGDALSVFEMMD 295
Query: 294 NIENLLGKMKEDGFEPNVYTWNA--------------MQLFSEML-SLDLTPDIYTVGII 338
I+ +++WN+ ++LF M+ S + PD+ TV +
Sbjct: 296 EID--------------IFSWNSIMSVHERCGDHYGTLRLFDRMMGSSRVQPDLVTVTTV 341
Query: 339 LSACSSLATMERGKQVHAYAIRCGYDS--------DVHIGTALVDMYAKCGSLKHARLAY 390
L AC+ LA + G+++H Y + G DV + AL+DMYAKCG+++ AR+ +
Sbjct: 342 LPACTHLAALMHGREIHGYMVVNGLAKEESHDVFDDVLLNNALMDMYAKCGNMRDARMVF 401
Query: 391 KRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIK 450
+ D+ S N M+T Y MHG+G E + F R+ + P+ ISF+ LSAC HAG +K
Sbjct: 402 VNMREKDVASWNIMITGYGMHGYGGEALDIFSRMCQAQMVPNEISFVGLLSACSHAGMVK 461
Query: 451 TGSEFFDLM-AYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
G F M + Y V PS++HYTC++D+L RAG+L EAY+ + +P D V W +LL
Sbjct: 462 EGLGFLSEMESKYGVSPSIEHYTCVIDMLCRAGQLMEAYDLVLTMPFKADPVGWRSLLAA 521
Query: 510 CVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSP 569
C H + + ++AA ++IELEP++ GNYV+++N++ GR+ ++ R MK + + K P
Sbjct: 522 CRLHNDTDLAEVAASKVIELEPDHCGNYVLMSNVYGVVGRYEEVLEWRYTMKQQNVKKRP 581
Query: 570 GCSWIEDRDEIHKFRASDRSHDRSEEIY 597
GCSWIE + +H F DR+H ++E IY
Sbjct: 582 GCSWIELVNGVHVFITGDRTHPQTEYIY 609
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 107/429 (24%), Positives = 194/429 (45%), Gaps = 46/429 (10%)
Query: 96 TLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKF 155
T + L +CA LS GKE H ++ +N F +P + L+++Y +C + +L++F+
Sbjct: 31 TCIATLQSCAHNANLSKGKELHTHLLKNAFFGSPLAITSLINMYSKCSLIDHSLRVFNFP 90
Query: 156 SIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAF 215
+ N + + ++N++I+G++ N+L A
Sbjct: 91 THHN---------------------------------KNVFAYNALIAGFLANALPQRAL 117
Query: 216 SMFRDLLMRD-GIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVE 274
+++ MR GI P FTF V+ AC D + +IH L +GL+ D FVG ALV
Sbjct: 118 ALYNQ--MRHLGIAPDKFTFPCVIRACGDDDDGFVVTKIHGLMFKVGLELDVFVGSALVN 175
Query: 275 MYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYT 334
Y +++ + A F+E+ + +L +GF A+ +F M + P YT
Sbjct: 176 TYLKFRFVGEAYRVFEELPVRDVVLWNAMVNGFAQIGRFEEALGVFRRMGGNGVVPCRYT 235
Query: 335 VGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS 394
V +LS S + + G+ VH + + GY+S V + AL+DMY KC + A ++ +
Sbjct: 236 VTGVLSIFSVMGDFDNGRAVHGFVTKMGYESGVVVSNALIDMYGKCKCVGDALSVFEMMD 295
Query: 395 TPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASG-FRPDHISFLSALSACVHAGSIKTGS 453
D+ S N++++ + G + F R++ S +PD ++ + L AC H ++ G
Sbjct: 296 EIDIFSWNSIMSVHERCGDHYGTLRLFDRMMGSSRVQPDLVTVTTVLPACTHLAALMHGR 355
Query: 454 EFFDLMAY--------YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGA 505
E M +DV + ++D+ ++ G + +A + D W
Sbjct: 356 EIHGYMVVNGLAKEESHDVFDDVLLNNALMDMYAKCGNMRDARMVFVNM-REKDVASWNI 414
Query: 506 LLGGCVSHG 514
++ G HG
Sbjct: 415 MITGYGMHG 423
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 104/424 (24%), Positives = 177/424 (41%), Gaps = 57/424 (13%)
Query: 5 CGSLDDAKKV-------FKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETP 57
CG DD V FK+ E D +++V V EA E + D
Sbjct: 142 CGDDDDGFVVTKIHGLMFKVGLELDVFVGSALVNTYLKFRFVGEAYRVFEELPVRD---- 197
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
+V W+A++ GF Q G EEA+G+ RM G+ P T++ VL + + G+ H
Sbjct: 198 -VVLWNAMVNGFAQIGRFEEALGVFRRMGGNGVVPCRYTVTGVLSIFSVMGDFDNGRAVH 256
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
G++T+ G+ S V N L+D+Y +C + AL +F
Sbjct: 257 GFVTKMGYESGVVVSNALIDMYGKCKCVGDALSVF------------------------- 291
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
E+ D+++ I SWNS++S + + +F ++ ++P T +V
Sbjct: 292 ---EMMDEID-------IFSWNSIMSVHERCGDHYGTLRLFDRMMGSSRVQPDLVTVTTV 341
Query: 238 LIACADMNSLRKGKEIHALAIALGLQS--------DTFVGGALVEMYCRYQDLVAAQMAF 289
L AC + +L G+EIH + GL D + AL++MY + ++ A+M F
Sbjct: 342 LPACTHLAALMHGREIHGYMVVNGLAKEESHDVFDDVLLNNALMDMYAKCGNMRDARMVF 401
Query: 290 DEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATME 349
+ + + G+ + Y A+ +FS M + P+ + +LSACS ++
Sbjct: 402 VNMREKDVASWNIMITGYGMHGYGGEALDIFSRMCQAQMVPNEISFVGLLSACSHAGMVK 461
Query: 350 RGKQ-VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHAR-LAYKRISTPDLVSQNAMLTA 407
G + + G + T ++DM + G L A L D V ++L A
Sbjct: 462 EGLGFLSEMESKYGVSPSIEHYTCVIDMLCRAGQLMEAYDLVLTMPFKADPVGWRSLLAA 521
Query: 408 YAMH 411
+H
Sbjct: 522 CRLH 525
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 133/307 (43%), Gaps = 52/307 (16%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKC + DA VF+MM E D SWNS+++ G L +RM
Sbjct: 277 MYGKCKCVGDALSVFEMMDEIDIFSWNSIMSVHERCGDHYGTLRLFDRM----------- 325
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
M + ++P+ T+++VLPAC L L G+E HGY+
Sbjct: 326 ------------------------MGSSRVQPDLVTVTTVLPACTHLAALMHGREIHGYM 361
Query: 121 TRNGF--------MSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCE 172
NG + + N L+D+Y +CG+M A +F K+ S N +I GY
Sbjct: 362 VVNGLAKEESHDVFDDVLLNNALMDMYAKCGNMRDARMVFVNMREKDVASWNIMITGYGM 421
Query: 173 NGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSF 232
+G EA ++F +M + IS+ ++S + E ++ + G+ P+
Sbjct: 422 HGYGGEALDIFSRMCQAQMVPNEISFVGLLSACSHAGMVKEGLGFLSEMESKYGVSPSIE 481
Query: 233 TFGSVLIACADMNSLRKGK--EIHALAIALGLQSDTFVGGALVEMYCR-YQDLVAAQMAF 289
+ V+ DM R G+ E + L + + ++D VG + CR + D A++A
Sbjct: 482 HYTCVI----DM-LCRAGQLMEAYDLVLTMPFKADP-VGWRSLLAACRLHNDTDLAEVAA 535
Query: 290 DEIENIE 296
++ +E
Sbjct: 536 SKVIELE 542
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/191 (20%), Positives = 90/191 (47%), Gaps = 3/191 (1%)
Query: 329 TPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARL 388
T D+ T L +C+ A + +GK++H + ++ + T+L++MY+KC + H+
Sbjct: 26 TYDLGTCIATLQSCAHNANLSKGKELHTHLLKNAFFGSPLAITSLINMYSKCSLIDHSLR 85
Query: 389 AYKRIS--TPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHA 446
+ + ++ + NA++ + + + +A + ++ G PD +F + AC
Sbjct: 86 VFNFPTHHNKNVFAYNALIAGFLANALPQRALALYNQMRHLGIAPDKFTFPCVIRACGDD 145
Query: 447 GSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGAL 506
++ LM ++ + + +V+ + +GEAY +++P+ D V+W A+
Sbjct: 146 DDGFVVTKIHGLMFKVGLELDVFVGSALVNTYLKFRFVGEAYRVFEELPVR-DVVLWNAM 204
Query: 507 LGGCVSHGNLE 517
+ G G E
Sbjct: 205 VNGFAQIGRFE 215
>gi|225464633|ref|XP_002274427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
chloroplastic [Vitis vinifera]
gi|302143764|emb|CBI22625.3| unnamed protein product [Vitis vinifera]
Length = 880
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 185/608 (30%), Positives = 301/608 (49%), Gaps = 84/608 (13%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC S++DA KV K+ E D +
Sbjct: 260 MYCKCQSIEDAVKVSKLTLEYD------------------------------------VF 283
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
W+A+I GFTQ+ EAI M+ G+ PN T S +L AC+ + L LGK+ H +
Sbjct: 284 LWTAIISGFTQSLKFREAITAFHEMETSGVVPNNFTYSGILNACSSILALDLGKQIHSRV 343
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLS-ALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
G ++ V N LVD+Y +C +M+ A++ F + N
Sbjct: 344 VMAGLENDVSVGNSLVDMYMKCSNMIEDAVRAFRGIASPN-------------------- 383
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
+ISW S+I+G+ ++ L +E+ +F + G+ P SFT ++L
Sbjct: 384 ---------------VISWTSLIAGFSEHGLEEESIKVF-GAMQGVGVRPNSFTLSTILG 427
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDL-----VAAQMAFDEIEN 294
AC + SL + +++H I +D VG ALV+ Y + V + M ++
Sbjct: 428 ACGTIKSLTQTRKLHGYIIKNNADNDVVVGNALVDAYAGLGMVDDAWHVTSMMKHRDVIT 487
Query: 295 IENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV 354
+L ++ + G A+ + + M D+ D +++ LSA + + ME GKQ+
Sbjct: 488 YTSLATRINQTGNHEM-----ALNIITHMNKDDVRMDGFSLASFLSAAAGIPIMETGKQL 542
Query: 355 HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHG 414
H Y+++ G S + + LVD+Y KCG + A ++ I+ PD VS N ++ A +GH
Sbjct: 543 HCYSVKSGLGSWISVSNGLVDLYGKCGCIHDAHRSFLEITEPDAVSWNGLIFGLASNGHV 602
Query: 415 KEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTC 473
++ F + +G PD I+ L L AC H G + G ++F M + ++P L HY C
Sbjct: 603 SSALSAFEDMRLAGVEPDQITCLLVLYACSHGGLVDMGLDYFQSMREKHGIRPQLDHYVC 662
Query: 474 MVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNN 533
+VDLL RAG L EA I+ +P PD++++ LLG C HGN+ G+ A + +EL+P++
Sbjct: 663 LVDLLGRAGRLEEAMNVIETMPFKPDALIYKTLLGACKLHGNIPLGEHMARQGLELDPSD 722
Query: 534 TGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRS 593
YV+LANL+ +GR +TR+ M++R + K+PG SW+E+R+ +H F A D SH +
Sbjct: 723 PAFYVLLANLYDDSGRSELGEKTRRMMRERGVRKNPGQSWMEERNMVHLFTAGDTSHPQI 782
Query: 594 EEIYTIID 601
+I+ I+
Sbjct: 783 GKIHEKIE 790
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 119/462 (25%), Positives = 216/462 (46%), Gaps = 77/462 (16%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+YGKC + +A+++F MP RD +
Sbjct: 59 LYGKCFGVAEARQLFDEMPCRD------------------------------------VA 82
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ ++ + + G EEA+ + M G PN TLS+ L +C+ L++ + G F +
Sbjct: 83 SWTMLMSAYGKIGNHEEALELFDSMLISGEYPNEFTLSTALRSCSALREFNHGTRFQALV 142
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
T++GF SNP + + L+D Y +CG A ++F + + VS ++ + E G+ ++A
Sbjct: 143 TKSGFDSNPVLGSALIDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMVSSFVEAGSWSQAL 202
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+L+ +M ++ G+ P FTF L+A
Sbjct: 203 QLYHRM------------------------------------IQTGVAPNEFTFVK-LLA 225
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
+ L GK +HA + ++ + + ALV+MYC+ Q + A + L
Sbjct: 226 ASSFLGLNYGKLVHAHLMMWRIELNLVLKTALVDMYCKCQSIEDAVKVSKLTLEYDVFLW 285
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
GF ++ A+ F EM + + P+ +T IL+ACSS+ ++ GKQ+H+ +
Sbjct: 286 TAIISGFTQSLKFREAITAFHEMETSGVVPNNFTYSGILNACSSILALDLGKQIHSRVVM 345
Query: 361 CGYDSDVHIGTALVDMYAKCGSL-KHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
G ++DV +G +LVDMY KC ++ + A A++ I++P+++S +++ ++ HG +E I
Sbjct: 346 AGLENDVSVGNSLVDMYMKCSNMIEDAVRAFRGIASPNVISWTSLIAGFSEHGLEEESIK 405
Query: 420 HFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY 461
F + G RP+ + + L AC G+IK+ ++ L Y
Sbjct: 406 VFGAMQGVGVRPNSFTLSTILGAC---GTIKSLTQTRKLHGY 444
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 107/449 (23%), Positives = 189/449 (42%), Gaps = 51/449 (11%)
Query: 116 FHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGN 175
H I + GF + F+ N L+ +Y +C
Sbjct: 37 IHSPIIKMGFQEDMFLSNNLLSLYGKCF-------------------------------G 65
Query: 176 VAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFG 235
VAEAR+LFD+M R + SW ++S Y ++EA +F +L+ G P FT
Sbjct: 66 VAEARQLFDEMP----CRDVASWTMLMSAYGKIGNHEEALELFDSMLI-SGEYPNEFTLS 120
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
+ L +C+ + G AL G S+ +G AL++ Y + A F+ + N
Sbjct: 121 TALRSCSALREFNHGTRFQALVTKSGFDSNPVLGSALIDFYSKCGCTQEAYRVFEYMNNG 180
Query: 296 ENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVH 355
+ + M F A+QL+ M+ + P+ +T + L A SS + GK VH
Sbjct: 181 DIVSWTMMVSSFVEAGSWSQALQLYHRMIQTGVAPNEFTF-VKLLAASSFLGLNYGKLVH 239
Query: 356 AYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGK 415
A+ + + ++ + TALVDMY KC S++ A K D+ A+++ + +
Sbjct: 240 AHLMMWRIELNLVLKTALVDMYCKCQSIEDAVKVSKLTLEYDVFLWTAIISGFTQSLKFR 299
Query: 416 EGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMV 475
E I F + SG P++ ++ L+AC ++ G + + ++ + +V
Sbjct: 300 EAITAFHEMETSGVVPNNFTYSGILNACSSILALDLGKQIHSRVVMAGLENDVSVGNSLV 359
Query: 476 DLLSRAGELGE-AYEFIKKIPMAPDSVMWGALLGGCVSHGNLE-----FGQIAADRLIEL 529
D+ + + E A + I +P+ + W +L+ G HG E FG + + +
Sbjct: 360 DMYMKCSNMIEDAVRAFRGIA-SPNVISWTSLIAGFSEHGLEEESIKVFGAMQG---VGV 415
Query: 530 EPNNTGNYVMLANLFAYAGRWSDLARTRQ 558
PN+ L+ + G L +TR+
Sbjct: 416 RPNS----FTLSTILGACGTIKSLTQTRK 440
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 151/311 (48%), Gaps = 10/311 (3%)
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
+++ + S+R G IH+ I +G Q D F+ L+ +Y + + A+ FDE+ +
Sbjct: 22 IVSFCNSRSVRDGICIHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEARQLFDEMPCRDV 81
Query: 298 LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAY 357
M + A++LF ML P+ +T+ L +CS+L G + A
Sbjct: 82 ASWTMLMSAYGKIGNHEEALELFDSMLISGEYPNEFTLSTALRSCSALREFNHGTRFQAL 141
Query: 358 AIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEG 417
+ G+DS+ +G+AL+D Y+KCG + A ++ ++ D+VS M++++ G +
Sbjct: 142 VTKSGFDSNPVLGSALIDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMVSSFVEAGSWSQA 201
Query: 418 IAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDL 477
+ + R++ +G P+ +F+ L+A G + G + + ++ +L T +VD+
Sbjct: 202 LQLYHRMIQTGVAPNEFTFVKLLAASSFLG-LNYGKLVHAHLMMWRIELNLVLKTALVDM 260
Query: 478 LSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNY 537
+ + +A + + K+ + D +W A++ G +L+F + A E+E +
Sbjct: 261 YCKCQSIEDAVK-VSKLTLEYDVFLWTAIISGFTQ--SLKFRE-AITAFHEMETSG---- 312
Query: 538 VMLANLFAYAG 548
++ N F Y+G
Sbjct: 313 -VVPNNFTYSG 322
>gi|255572826|ref|XP_002527345.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533264|gb|EEF35017.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 687
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 172/614 (28%), Positives = 304/614 (49%), Gaps = 86/614 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KCG++ +A+K+F + R N+V
Sbjct: 118 VYAKCGAMGNARKIFDSLHRR------------------------------------NVV 141
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+A++ G+ QN AI + M G P+ TL L AC+ + + LGK+ H ++
Sbjct: 142 AWTALMTGYVQNSQPNIAIDVFQDMLESGTLPSNYTLGIALNACSAINSIKLGKQLHAFV 201
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ +P + N L +Y + G + S++ +F KN
Sbjct: 202 IKYKLDYDPSIGNALCSLYSKLGSLDSSINVFQSIGEKN--------------------- 240
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+ISW ++IS +N F ++L+ D I+P FT +VL
Sbjct: 241 --------------VISWTAVISACGENGKAAMGLRFFNEMLLED-IKPNEFTLTTVLSL 285
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C +L G+ +H+L+I LG Q + + +++ +Y + + AQ+ F ++ + NL+
Sbjct: 286 CCVTLALVLGRLVHSLSIKLGYQYNLRITNSIMYLYLKCGHMDEAQILFHKMGST-NLVT 344
Query: 301 ------------KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATM 348
+ +D F A+ +F E+ PD++T+ +L+ CS L+ +
Sbjct: 345 WNAMISGHAQAMDLAKDDFSAQRSGIEALSIFLELNRTGKKPDLFTLSSVLTVCSRLSAL 404
Query: 349 ERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAY 408
+G+Q+HA I+ GY SDV +GTALV+MY+KCGS+ A A+ +ST L+S M+T
Sbjct: 405 GQGEQLHAQTIKSGYLSDVVVGTALVNMYSKCGSIGKASKAFVEMSTRTLISWTTMITGL 464
Query: 409 AMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPS 467
A HGH ++ + F + +G RP+ I+F+ L+AC H+G + +F++M Y +KP
Sbjct: 465 AQHGHSEQALQLFEDMRLAGVRPNQITFVGVLAACCHSGMVDEALGYFEMMQKEYRIKPV 524
Query: 468 LKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLI 527
+ HY C++ + + L EA++ I K+ P +W L+ GC + G E G AA++L+
Sbjct: 525 MDHYGCLIAMFVKLRRLDEAFDIINKMDFEPSEFIWSILIAGCRNLGKQELGFYAAEQLL 584
Query: 528 ELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASD 587
+L+ +T YV L N++ A RW D++R R+ MK+ ++ K SWI +++IH F+ +
Sbjct: 585 KLKLKDTETYVTLLNMYISAKRWQDVSRVRKLMKEEKLGKFNDWSWITIKEKIHSFKTTG 644
Query: 588 RSHDRSEEIYTIID 601
R H + ++Y +++
Sbjct: 645 RLHPHNAKMYELLE 658
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 116/482 (24%), Positives = 214/482 (44%), Gaps = 82/482 (17%)
Query: 80 GMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVY 139
+ F + + +EP+ +L C + +S + H +I + G + V+ LV+VY
Sbjct: 62 ALCFIKEEKKIEPSYYL--PLLQECTKKNSVSEAQVIHAHIIKTGTHKDLAVMTSLVNVY 119
Query: 140 RRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWN 199
+CG M +A KIF +N V+ ++ GY
Sbjct: 120 AKCGAMGNARKIFDSLHRRNVVAWTALMTGY----------------------------- 150
Query: 200 SMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIA 259
V NS + A +F+D+L G P+++T G L AC+ +NS++ GK++HA I
Sbjct: 151 ------VQNSQPNIAIDVFQDML-ESGTLPSNYTLGIALNACSAINSIKLGKQLHAFVIK 203
Query: 260 LGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNA--- 316
L D +G AL +Y + L ++ F I E NV +W A
Sbjct: 204 YKLDYDPSIGNALCSLYSKLGSLDSSINVFQSIG--------------EKNVISWTAVIS 249
Query: 317 -----------MQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDS 365
++ F+EML D+ P+ +T+ +LS C + G+ VH+ +I+ GY
Sbjct: 250 ACGENGKAAMGLRFFNEMLLEDIKPNEFTLTTVLSLCCVTLALVLGRLVHSLSIKLGYQY 309
Query: 366 DVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAM-----------HGHG 414
++ I +++ +Y KCG + A++ + ++ + +LV+ NAM++ +A G
Sbjct: 310 NLRITNSIMYLYLKCGHMDEAQILFHKMGSTNLVTWNAMISGHAQAMDLAKDDFSAQRSG 369
Query: 415 KEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCM 474
E ++ F + +G +PD + S L+ C ++ G + + T +
Sbjct: 370 IEALSIFLELNRTGKKPDLFTLSSVLTVCSRLSALGQGEQLHAQTIKSGYLSDVVVGTAL 429
Query: 475 VDLLSRAGELGEAYEFIKKIPMAPDSVM-WGALLGGCVSHGNLEFG-QIAAD-RLIELEP 531
V++ S+ G +G+A + + M+ +++ W ++ G HG+ E Q+ D RL + P
Sbjct: 430 VNMYSKCGSIGKASKAF--VEMSTRTLISWTTMITGLAQHGHSEQALQLFEDMRLAGVRP 487
Query: 532 NN 533
N
Sbjct: 488 NQ 489
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 101/386 (26%), Positives = 172/386 (44%), Gaps = 44/386 (11%)
Query: 200 SMISGYVDNSL-------YDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKE 252
S I+ +D SL + EA ++ IEP+ + +L C NS+ + +
Sbjct: 41 SSINTQLDGSLEPIKPLEFHEALCFIKE---EKKIEPSYYL--PLLQECTKKNSVSEAQV 95
Query: 253 IHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVY 312
IHA I G D V +LV +Y + + A+ FD + + G+ N
Sbjct: 96 IHAHIIKTGTHKDLAVMTSLVNVYAKCGAMGNARKIFDSLHRRNVVAWTALMTGYVQNSQ 155
Query: 313 TWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTA 372
A+ +F +ML P YT+GI L+ACS++ +++ GKQ+HA+ I+ D D IG A
Sbjct: 156 PNIAIDVFQDMLESGTLPSNYTLGIALNACSAINSIKLGKQLHAFVIKYKLDYDPSIGNA 215
Query: 373 LVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPD 432
L +Y+K GSL + ++ I +++S A+++A +G G+ F +L +P+
Sbjct: 216 LCSLYSKLGSLDSSINVFQSIGEKNVISWTAVISACGENGKAAMGLRFFNEMLLEDIKPN 275
Query: 433 HISFLSALSAC-----------VHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRA 481
+ + LS C VH+ SIK G ++ +L+ ++ L +
Sbjct: 276 EFTLTTVLSLCCVTLALVLGRLVHSLSIKLGYQY-----------NLRITNSIMYLYLKC 324
Query: 482 GELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADR------LIELEPNNTG 535
G + EA K+ + + V W A++ G +L +A R I LE N TG
Sbjct: 325 GHMDEAQILFHKMG-STNLVTWNAMISGHAQAMDLAKDDFSAQRSGIEALSIFLELNRTG 383
Query: 536 ---NYVMLANLFAYAGRWSDLARTRQ 558
+ L+++ R S L + Q
Sbjct: 384 KKPDLFTLSSVLTVCSRLSALGQGEQ 409
>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Cucumis sativus]
Length = 723
Score = 309 bits (791), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 170/578 (29%), Positives = 293/578 (50%), Gaps = 70/578 (12%)
Query: 57 PNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEF 116
PNL W+ +I G+++ + + + + M G++P+ T + R L G++
Sbjct: 81 PNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQL 140
Query: 117 HGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNV 176
HG++ ++G N FV LV +Y CG + +A +F C +V
Sbjct: 141 HGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFD----------------VCPKADV 184
Query: 177 AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDG-IEPTSFTFG 235
I+WN +IS Y ++E+ +F L+M D + PT+ T
Sbjct: 185 -------------------ITWNMIISAYNKVGKFEESRRLF--LVMEDKQVLPTTVTLV 223
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYC------------------ 277
VL AC+ + LR GK++H+ ++S+ + A+++MY
Sbjct: 224 LVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNR 283
Query: 278 ---RYQDLVAAQMAFDEIENIENLLGKMKE----------DGFEPNVYTWNAMQLFSEML 324
+ +V+ EI+ N KM E DG+ + A++LF M
Sbjct: 284 DIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQ 343
Query: 325 SLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLK 384
+ ++ PD +T+ +L+AC+ L +E G+ + Y R +D+ + AL+DMY KCG +
Sbjct: 344 ATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVD 403
Query: 385 HARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACV 444
A ++ +S D + AM+ A++GHG++ + F +L + PD I+++ LSAC
Sbjct: 404 KAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACT 463
Query: 445 HAGSIKTGSEFF-DLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMW 503
H G + G ++F + + + ++P++ HY C+VDLL+RAG L EAYE I+ +P+ +S++W
Sbjct: 464 HTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVW 523
Query: 504 GALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDR 563
GALL GC + + ++ +++ELEP+N YV+L N++A RW+DL RQ M D+
Sbjct: 524 GALLAGCRVYRESDMAEMVVKQILELEPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDK 583
Query: 564 RMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
+ K+PGCS IE +H+F A DRSH +++ I +D
Sbjct: 584 GIKKTPGCSLIEMNGRVHEFVAGDRSHPQTKNIDAKLD 621
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 152/296 (51%), Gaps = 8/296 (2%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY CG +D A +F+ M RD +SW ++V+ G + A ++M D V
Sbjct: 263 MYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKD-----YV 317
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A+I G+ ++ +EA+ + MQA ++P+ T+ SVL ACA L L LG+ YI
Sbjct: 318 SWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYI 377
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
RN ++ FV N L+D+Y +CGD+ A IF + S +++ + +IVG NG+ +A
Sbjct: 378 DRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKAL 437
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
++F M + I++ ++S L D+ F + + GIEP +G ++
Sbjct: 438 DMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDL 497
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
A L KE + + + +++++ V GAL+ Y++ A+M +I +E
Sbjct: 498 LARAGRL---KEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELE 550
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/192 (19%), Positives = 83/192 (43%), Gaps = 6/192 (3%)
Query: 328 LTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYA--KCGSLKH 385
+P + + +L C S M++ +QVH AI+ G +++ + ++ + G ++
Sbjct: 14 FSPPTHPLISLLETCES---MDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQY 70
Query: 386 ARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVH 445
AR + I P+L N M+ Y+ + G++ + +L G +PD +F
Sbjct: 71 ARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTR 130
Query: 446 AGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGA 505
+++ G + + + ++ ++ +T +V + G+L A P A D + W
Sbjct: 131 DIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKA-DVITWNM 189
Query: 506 LLGGCVSHGNLE 517
++ G E
Sbjct: 190 IISAYNKVGKFE 201
>gi|326494876|dbj|BAJ94557.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 783
Score = 309 bits (791), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 188/639 (29%), Positives = 309/639 (48%), Gaps = 102/639 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y K G +D A VF +P R N V
Sbjct: 181 LYAKAGRIDAAMSVFDALPAR------------------------------------NPV 204
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+AVI G++Q G A+ + RM +G+ P+ L+S AC+ L + G++ HGY
Sbjct: 205 TWTAVITGYSQAGQAGVALELFGRMGLDGVRPDRFVLASAASACSGLGFVEGGRQIHGYA 264
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R S+ VVN L+D+Y +C +L A ++F +N VS T+I GY +N EA
Sbjct: 265 YRTAAESDASVVNALIDLYCKCSRLLLARRLFDSMENRNLVSWTTMIAGYMQNSLDTEAM 324
Query: 181 ELFDQMEHLGVQRGIISWNSMISG--------------------------YVDNSLYD-- 212
+F Q+ G Q + + S+++ YV N+L D
Sbjct: 325 SMFWQLSQAGWQPDVFACTSILNSCGSLAAIWQGRQVHAHVIKADLESDEYVKNALIDMY 384
Query: 213 -------EAFSMFRDLLMRDGI------------------------------EPTSFTFG 235
EA ++F L D I +P+ TF
Sbjct: 385 AKCEHLTEARAVFEALAEDDAISYNAMIEGYARLGDLTGAVEIFGKMRYCSLKPSLLTFV 444
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
S+L + + L K+IH L + G D + G AL+++Y ++ + A++ F ++N
Sbjct: 445 SLLGVSSSRSDLELSKQIHGLIVKSGTSLDLYAGSALIDVYSKFSLVDDAKLVFSLMQNR 504
Query: 296 ENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVH 355
+ ++ G N A++LF+ + LTP+ +T +++ S+LA++ G+Q H
Sbjct: 505 DMVIWNAMIFGLAQNERGEEAVKLFARLRVSGLTPNEFTFVALVTVASTLASIFHGQQFH 564
Query: 356 AYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGK 415
A I+ G DSD HI AL+DMYAKCG ++ RL ++ D++ N+M++ YA HGH +
Sbjct: 565 AQIIKAGADSDPHISNALIDMYAKCGFIEEGRLLFESTLGKDVICWNSMISTYAQHGHAE 624
Query: 416 EGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCM 474
E + F + +G P++++F+S LSAC HAG + G F+ M Y V+P +HY +
Sbjct: 625 EALHVFGMMEGAGVEPNYVTFVSVLSACAHAGLVDEGLHHFNSMKTKYAVEPGTEHYASV 684
Query: 475 VDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNT 534
V+L R+G+L A EFI+++P+ P + +W +LL C GN+E G+ A + + +P ++
Sbjct: 685 VNLFGRSGKLHAAKEFIERMPIEPVATIWRSLLSACHLFGNVEIGRYATEMALLADPADS 744
Query: 535 GNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSW 573
G V+++N++A G W+D + RQ M + K PG SW
Sbjct: 745 GPSVLMSNIYASKGLWADAQKLRQGMDCAGVVKEPGYSW 783
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 140/540 (25%), Positives = 236/540 (43%), Gaps = 83/540 (15%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y K G L DA+++F MP R NLVS
Sbjct: 75 YSKLGRLGDARRLFDSMPSR------------------------------------NLVS 98
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRM-------QAEGLEPNARTLSSVLPACARLQKLSLGK 114
W + I + Q+G +++A+ +LF +G PN L+S L ACA+ + G+
Sbjct: 99 WGSAISMYAQHGREDDAL-LLFAAFPSAGAASPDGEPPNEFLLASALRACAQSRAARFGE 157
Query: 115 EFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
+ HG + G +N FV LV++Y + G + +A+ +F +N V+ +I GY + G
Sbjct: 158 QVHGVAAKLGLDANVFVGTALVNLYAKAGRIDAAMSVFDALPARNPVTWTAVITGYSQAG 217
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTF 234
A ELF +M G+ DG+ P F
Sbjct: 218 QAGVALELFGRM-------GL-----------------------------DGVRPDRFVL 241
Query: 235 GSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIEN 294
S AC+ + + G++IH A +SD V AL+++YC+ L+ A+ FD +EN
Sbjct: 242 ASAASACSGLGFVEGGRQIHGYAYRTAAESDASVVNALIDLYCKCSRLLLARRLFDSMEN 301
Query: 295 IENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV 354
+ G+ N AM +F ++ PD++ IL++C SLA + +G+QV
Sbjct: 302 RNLVSWTTMIAGYMQNSLDTEAMSMFWQLSQAGWQPDVFACTSILNSCGSLAAIWQGRQV 361
Query: 355 HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHG 414
HA+ I+ +SD ++ AL+DMYAKC L AR ++ ++ D +S NAM+ YA G
Sbjct: 362 HAHVIKADLESDEYVKNALIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYARLGDL 421
Query: 415 KEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCM 474
+ F ++ +P ++F+S L ++ + L+ L + +
Sbjct: 422 TGAVEIFGKMRYCSLKPSLLTFVSLLGVSSSRSDLELSKQIHGLIVKSGTSLDLYAGSAL 481
Query: 475 VDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSH--GNLEFGQIAADRLIELEPN 532
+D+ S+ + +A + + + D V+W A++ G + G A R+ L PN
Sbjct: 482 IDVYSKFSLVDDA-KLVFSLMQNRDMVIWNAMIFGLAQNERGEEAVKLFARLRVSGLTPN 540
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 112/406 (27%), Positives = 189/406 (46%), Gaps = 22/406 (5%)
Query: 163 CNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDL- 221
N ++ GY + G + +AR LFD M R ++SW S IS Y + D+A +F
Sbjct: 68 ANLLLRGYSKLGRLGDARRLFDSMP----SRNLVSWGSAISMYAQHGREDDALLLFAAFP 123
Query: 222 ----LMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYC 277
DG P F S L ACA + R G+++H +A LGL ++ FVG ALV +Y
Sbjct: 124 SAGAASPDGEPPNEFLLASALRACAQSRAARFGEQVHGVAAKLGLDANVFVGTALVNLYA 183
Query: 278 RYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGI 337
+ + AA FD + + G+ A++LF M + PD + +
Sbjct: 184 KAGRIDAAMSVFDALPARNPVTWTAVITGYSQAGQAGVALELFGRMGLDGVRPDRFVLAS 243
Query: 338 ILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPD 397
SACS L +E G+Q+H YA R +SD + AL+D+Y KC L AR + + +
Sbjct: 244 AASACSGLGFVEGGRQIHGYAYRTAAESDASVVNALIDLYCKCSRLLLARRLFDSMENRN 303
Query: 398 LVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFD 457
LVS M+ Y + E ++ F ++ +G++PD + S L++C +I G +
Sbjct: 304 LVSWTTMIAGYMQNSLDTEAMSMFWQLSQAGWQPDVFACTSILNSCGSLAAIWQGRQVHA 363
Query: 458 LMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
+ D++ ++D+ ++ L EA + + D++ + A++ G G+L
Sbjct: 364 HVIKADLESDEYVKNALIDMYAKCEHLTEARAVFEALA-EDDAISYNAMIEGYARLGDLT 422
Query: 518 -----FGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQ 558
FG++ R L+P + + +L + SDL ++Q
Sbjct: 423 GAVEIFGKM---RYCSLKP----SLLTFVSLLGVSSSRSDLELSKQ 461
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 108/235 (45%), Gaps = 17/235 (7%)
Query: 233 TFGSVLIACADMNSLRKG-KEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDE 291
+ +L++C + LR+ HA A+ GL D F+ L+ Y + L A+ FD
Sbjct: 31 SLAQLLLSCLAGDRLRRVLPPAHARAVVSGLLPDLFLANLLLRGYSKLGRLGDARRLFDS 90
Query: 292 IENIENLLGKMKEDGFEPNVYTW-----NAMQLFSEMLSLDLT------PDIYTVGIILS 340
+ + NL+ G ++Y +A+ LF+ S P+ + + L
Sbjct: 91 MPS-RNLVSW----GSAISMYAQHGREDDALLLFAAFPSAGAASPDGEPPNEFLLASALR 145
Query: 341 ACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVS 400
AC+ G+QVH A + G D++V +GTALV++YAK G + A + + + V+
Sbjct: 146 ACAQSRAARFGEQVHGVAAKLGLDANVFVGTALVNLYAKAGRIDAAMSVFDALPARNPVT 205
Query: 401 QNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEF 455
A++T Y+ G + F R+ G RPD SA SAC G ++ G +
Sbjct: 206 WTAVITGYSQAGQAGVALELFGRMGLDGVRPDRFVLASAASACSGLGFVEGGRQI 260
>gi|449485565|ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 953
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 179/592 (30%), Positives = 301/592 (50%), Gaps = 68/592 (11%)
Query: 68 GFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMS 127
+ Q A + M + L + T ++ AC+ + K+ H ++ + GF S
Sbjct: 187 AYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDS 246
Query: 128 NPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQME 187
+ +V N L++ + C +M A ++F++ S+ + VS N+I+ GY E GNV EA+ ++ QM
Sbjct: 247 DVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMP 306
Query: 188 HLGV---------------------------QRGIISWNSMISGYVDNSLYDEAFSMFRD 220
+ ++ +++W+++I+ + N +Y+EA F
Sbjct: 307 ERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVG 366
Query: 221 LLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQ 280
+ + G+ S L ACA++ + GK IH+L++ +G +S + AL+ MY +
Sbjct: 367 -MHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCG 425
Query: 281 DLVAAQMAFDE---------------------IENIENLLGKMKEDGFEPNVYTWNAM-- 317
D++ A+ FDE ++N + + M E +V +W++M
Sbjct: 426 DIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEK----DVVSWSSMIS 481
Query: 318 ------------QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDS 365
LF EM PD T+ ++SAC+ LA +E+GK VHAY R G
Sbjct: 482 GYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTI 541
Query: 366 DVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRIL 425
+V +GT L+DMY KCG ++ A + + + + NA++ AM+G + + F +
Sbjct: 542 NVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMK 601
Query: 426 ASGFRPDHISFLSALSACVHAGSIKTGS-EFFDLMAYYDVKPSLKHYTCMVDLLSRAGEL 484
P+ I+F+ L AC H G + G F+ ++ + ++P++KHY CMVDLL RAG+L
Sbjct: 602 KCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKL 661
Query: 485 GEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLF 544
EA E + ++PM PD WGALLG C HG+ E G+ +LIEL+P++ G +V+L+N++
Sbjct: 662 QEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIY 721
Query: 545 AYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEI 596
A G+W D+ R M R+ K PGCS IE IH+F A D++H + I
Sbjct: 722 ASKGKWDDVLEIRGMMTKHRVLKIPGCSMIEANGVIHEFLAGDKTHPDMDAI 773
Score = 198 bits (503), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 140/460 (30%), Positives = 227/460 (49%), Gaps = 50/460 (10%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y + G++++AK ++ MPER ++ NS++ GLV+EA + + M D +V+
Sbjct: 289 YIEIGNVEEAKHIYHQMPERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKD-----MVT 343
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
WSA+I F QN EEAI M G+ + S L ACA L +++GK H
Sbjct: 344 WSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSL 403
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
+ G S + N L+ +Y +CGD++ A K+F + + + +S N++I GY + V A+
Sbjct: 404 KIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKA 463
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
+FD M ++ ++SW+SMISGY N L+DE ++F+++ M G +P T SV+ AC
Sbjct: 464 IFDSMP----EKDVVSWSSMISGYAQNDLFDETLALFQEMQM-SGFKPDETTLVSVISAC 518
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK 301
A + +L +GK +HA GL + +G L++MY M +E +
Sbjct: 519 ARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMY----------MKCGCVETALEVFYG 568
Query: 302 MKEDGFEPNVYTWNAMQL--------------FSEMLSLDLTPDIYTVGIILSACSSLAT 347
M E G + TWNA+ L FS M +TP+ T +L AC +
Sbjct: 569 MIEKG----ISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGL 624
Query: 348 MERGKQ-----VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVSQ 401
++ G+ +H + I+ H G +VD+ + G L+ A R+ TPD+ +
Sbjct: 625 VDEGQHHFYSMIHDHKIQPNVK---HYG-CMVDLLGRAGKLQEAEELLNRMPMTPDVATW 680
Query: 402 NAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALS 441
A+L A HG + G R+++ +PDH F LS
Sbjct: 681 GALLGACKKHGDSEMGRRVGRKLIE--LQPDHDGFHVLLS 718
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 132/273 (48%), Gaps = 8/273 (2%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG + A+K+F D +SWNS+++ LV A + M D +V
Sbjct: 420 MYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKD-----VV 474
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SWS++I G+ QN +E + + MQ G +P+ TL SV+ ACARL L GK H YI
Sbjct: 475 SWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYI 534
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
RNG N + L+D+Y +CG + +AL++F K + N +I+G NG V +
Sbjct: 535 KRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSL 594
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
++F M+ V I++ ++ L DE F ++ I+P +G ++
Sbjct: 595 DMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDL 654
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALV 273
L++ +E L + + D GAL+
Sbjct: 655 LGRAGKLQEAEE---LLNRMPMTPDVATWGALL 684
>gi|297814916|ref|XP_002875341.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297321179|gb|EFH51600.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 659
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 177/555 (31%), Positives = 291/555 (52%), Gaps = 44/555 (7%)
Query: 55 ETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGK 114
+ ++ SW++VI ++G EA+ M+ L P + + AC+ L + GK
Sbjct: 37 DKTDVFSWNSVIADLARSGDSAEALRAFSSMRKLSLYPTRSSFPCAIKACSSLLDIFSGK 96
Query: 115 EFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
+ H G+ S+ FV + L+ +Y CG +
Sbjct: 97 QTHQQAFVFGYQSDIFVSSALIVMYSTCGKL----------------------------- 127
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPT---- 230
+AR++FD++ +R I+SW SMI GY N +A S+F+DLL+ + +
Sbjct: 128 --EDARKVFDEIP----KRNIVSWTSMIRGYDLNGNALDAVSLFKDLLIEENDDDATMFL 181
Query: 231 -SFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQD--LVAAQM 287
S SV+ AC+ + + + IH+ I G VG L++ Y + + + A+
Sbjct: 182 DSMGMVSVISACSRVAAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARK 241
Query: 288 AFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDL-TPDIYTVGIILSACSSLA 346
FD+I + + + + + + A +F ++ + T + T+ +L A S
Sbjct: 242 IFDQIVDKDRVSYNSIMSVYAQSGMSNEAFDVFRRLIKEKVVTFNCITLSTVLLAVSHSG 301
Query: 347 TMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLT 406
+ GK +H IR G + DV +GT+++DMY KCG ++ ARLA+ R+ ++ S AM+
Sbjct: 302 ALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARLAFDRMKNKNVRSWTAMIA 361
Query: 407 AYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVK 465
Y MHGH + + F ++ SG RP++I+F+S L+AC HAG G +F+ M + V+
Sbjct: 362 GYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHDVGWHWFNAMKGRFGVE 421
Query: 466 PSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADR 525
P L+HY CMVDLL RAG L +AY+ I+K+ M PDS++W +LL C H N+E +I+ R
Sbjct: 422 PGLEHYGCMVDLLGRAGFLQKAYDLIQKMKMEPDSIIWSSLLAACRIHKNVELAEISVAR 481
Query: 526 LIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRA 585
L EL+P+N G Y++L++++A +GRW D+ R R MK+R + K PG S +E E+H F
Sbjct: 482 LFELDPSNCGYYMLLSHIYADSGRWKDVERVRMTMKNRGLVKPPGFSLLELNGEVHVFLI 541
Query: 586 SDRSHDRSEEIYTII 600
D H + E+IY +
Sbjct: 542 GDEEHPQREKIYEFL 556
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 107/415 (25%), Positives = 185/415 (44%), Gaps = 69/415 (16%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY CG L+DA+KVF +P+R+ VSW S++ NG L+A+ + + +N
Sbjct: 120 MYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLIEEN------ 173
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
D++A L ++ + SV+ AC+R+ L + H ++
Sbjct: 174 --------------DDDATMFL----------DSMGMVSVISACSRVAAKGLTESIHSFV 209
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGD--MLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
+ GF V N L+D Y + G+ + A KIF + K+ VS N+I+ Y ++G
Sbjct: 210 IKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSG---- 265
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
+ +EAF +FR L+ + T +VL
Sbjct: 266 -------------------------------MSNEAFDVFRRLIKEKVVTFNCITLSTVL 294
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
+A + +LR GK IH I +GL+ D VG ++++MYC+ + A++AFD ++N
Sbjct: 295 LAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARLAFDRMKNKNVR 354
Query: 299 LGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ-VHAY 357
G+ + + A++LF M+ + P+ T +L+ACS + G +A
Sbjct: 355 SWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHDVGWHWFNAM 414
Query: 358 AIRCGYDSDVHIGTALVDMYAKCGSLKHA-RLAYKRISTPDLVSQNAMLTAYAMH 411
R G + + +VD+ + G L+ A L K PD + +++L A +H
Sbjct: 415 KGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQKMKMEPDSIIWSSLLAACRIH 469
>gi|357138593|ref|XP_003570875.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 664
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 189/602 (31%), Positives = 310/602 (51%), Gaps = 45/602 (7%)
Query: 8 LDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIG 67
L DA++VF MP R+ VSW +++T A G V EA E +RM N+VSW+A++
Sbjct: 90 LADARRVFDAMPVRNPVSWAALLTGYARCGRVAEARELFDRMPD-----RNVVSWNAMMS 144
Query: 68 GFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMS 127
G+ +NG E A + M + N + +++ + ++L +E S
Sbjct: 145 GYLRNGMVERARELFDMMPSR----NDVSWLTMISGYIKKRRLREARELFDLSP-----S 195
Query: 128 NPF-VVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQM 186
+P V N L+ Y + A ++F + ++ VS N +I GY G + A+ LFD+M
Sbjct: 196 HPTSVCNALLSGYVALSCLKDAEELFGRMQRRDPVSWNVMITGYARAGRMQVAQSLFDEM 255
Query: 187 EHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNS 246
Q+ ISW +++ GY+ N D ++ +F+D+ RD + + G V D ++
Sbjct: 256 P----QKDTISWTAVMRGYLQNGDVDASWKVFQDIPDRDVVAWNTMMGGFVQSERLD-DA 310
Query: 247 LRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAF------DEIENIENLLG 300
LR E+ + D +++ + + D+ A F DE + L+
Sbjct: 311 LRLFAEMP--------ERDLVSWNTILQGHVQQGDMATANTWFRGMPEKDET-SWNTLIS 361
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
K++G A+ L SEM+ L PD T+ +++S C+SL + GK VH YA++
Sbjct: 362 GHKDEG---------ALALLSEMIRGGLRPDEATLSVVISICASLVALGYGKMVHLYAVK 412
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
G++ D + ++L+ MY+KCG + A +K + D V+ NAM+ YA HG E +
Sbjct: 413 TGFEHDALVMSSLISMYSKCGLIAEASQVFKLLVQRDTVTWNAMIATYAYHGMASEALKL 472
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLS 479
F ++ GFRPDH +FLS LSAC H G + G +F M +++ P HY+CMVDLL
Sbjct: 473 FNKMTKDGFRPDHATFLSVLSACAHKGDLYEGCRYFRSMQEDWNLTPRSDHYSCMVDLLG 532
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
R G + +AY+F +KIP W L C +HG+++ G++ A +++ P++ G Y +
Sbjct: 533 RLGFIYQAYDFTRKIPSDLQINAWETLFSACNAHGDVQLGEVIAKDVLQARPSDGGMYTL 592
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTI 599
LAN++A WS A R MK++ + K GCSW+E + E+ F ++D +H E I
Sbjct: 593 LANIYASKEMWSSAASVRGVMKEQGLKKETGCSWVELKGEVVSFSSNDNAHPLIEWICQE 652
Query: 600 ID 601
+D
Sbjct: 653 VD 654
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 95/409 (23%), Positives = 170/409 (41%), Gaps = 78/409 (19%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y +CG + +A+++F MP+R+ VSWN++++ NG+V A E + M S ++ VS
Sbjct: 115 YARCGRVAEARELFDRMPDRNVVSWNAMMSGYLRNGMVERARELFDMMPSRND-----VS 169
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNART--LSSVLPACARLQKLSLGKEFHGY 119
W +I G+ + EA + L P+ T +++L L L +E G
Sbjct: 170 WLTMISGYIKKRRLREARELF------DLSPSHPTSVCNALLSGYVALSCLKDAEELFGR 223
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ R +P N ++ Y R G M A +F + K+ +S ++ GY +NG+V +
Sbjct: 224 MQRR----DPVSWNVMITGYARAGRMQVAQSLFDEMPQKDTISWTAVMRGYLQNGDVDAS 279
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMF-----RDL------------- 221
++F + R +++WN+M+ G+V + D+A +F RDL
Sbjct: 280 WKVFQDIP----DRDVVAWNTMMGGFVQSERLDDALRLFAEMPERDLVSWNTILQGHVQQ 335
Query: 222 ---------------------------------------LMRDGIEPTSFTFGSVLIACA 242
++R G+ P T V+ CA
Sbjct: 336 GDMATANTWFRGMPEKDETSWNTLISGHKDEGALALLSEMIRGGLRPDEATLSVVISICA 395
Query: 243 DMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKM 302
+ +L GK +H A+ G + D V +L+ MY + + A F + + +
Sbjct: 396 SLVALGYGKMVHLYAVKTGFEHDALVMSSLISMYSKCGLIAEASQVFKLLVQRDTVTWNA 455
Query: 303 KEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG 351
+ + A++LF++M PD T +LSAC+ + G
Sbjct: 456 MIATYAYHGMASEALKLFNKMTKDGFRPDHATFLSVLSACAHKGDLYEG 504
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 87/438 (19%), Positives = 155/438 (35%), Gaps = 114/438 (26%)
Query: 152 FSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLG--------------------- 190
F + +N + N +I G N +A+AR +FD M
Sbjct: 66 FDEMPERNVFTWNCMISGLVGNRMLADARRVFDAMPVRNPVSWAALLTGYARCGRVAEAR 125
Query: 191 ------VQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADM 244
R ++SWN+M+SGY+ N + + A +F + R+ + + G +
Sbjct: 126 ELFDRMPDRNVVSWNAMMSGYLRNGMVERARELFDMMPSRNDVSWLTMISGYI-----KK 180
Query: 245 NSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKE 304
LR+ +E+ L+ + T V AL+ Y +A +++ E L G+M+
Sbjct: 181 RRLREARELFDLSPS----HPTSVCNALLSGY----------VALSCLKDAEELFGRMQR 226
Query: 305 DGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGY- 363
+ +WN M G + A S M + + A+ GY
Sbjct: 227 R----DPVSWNVM-----------ITGYARAGRMQVAQSLFDEMPQKDTISWTAVMRGYL 271
Query: 364 ----------------DSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTA 407
D DV ++ + + L A + + DLVS N +L
Sbjct: 272 QNGDVDASWKVFQDIPDRDVVAWNTMMGGFVQSERLDDALRLFAEMPERDLVSWNTILQG 331
Query: 408 YAMH--------------------------GHGKEG-IAHFRRILASGFRPDHISFLSAL 440
+ GH EG +A ++ G RPD + +
Sbjct: 332 HVQQGDMATANTWFRGMPEKDETSWNTLISGHKDEGALALLSEMIRGGLRPDEATLSVVI 391
Query: 441 SACVHAGSIKTGSEFFDLMAYYDVKPSLKH----YTCMVDLLSRAGELGEAYEFIKKIPM 496
S C ++ G ++ Y VK +H + ++ + S+ G + EA + K + +
Sbjct: 392 SICASLVALGYGK----MVHLYAVKTGFEHDALVMSSLISMYSKCGLIAEASQVFKLL-V 446
Query: 497 APDSVMWGALLGGCVSHG 514
D+V W A++ HG
Sbjct: 447 QRDTVTWNAMIATYAYHG 464
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 56/108 (51%), Gaps = 2/108 (1%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG + +A +VFK++ +RD V+WN+++ A +G+ EAL+ +M+ D P+
Sbjct: 428 MYSKCGLIAEASQVFKLLVQRDTVTWNAMIATYAYHGMASEALKLFNKMTK-DGFRPDHA 486
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARL 107
++ +V+ G E MQ + L P + S ++ RL
Sbjct: 487 TFLSVLSACAHKGDLYEGCRYFRSMQEDWNLTPRSDHYSCMVDLLGRL 534
>gi|218190567|gb|EEC72994.1| hypothetical protein OsI_06907 [Oryza sativa Indica Group]
Length = 711
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 194/675 (28%), Positives = 302/675 (44%), Gaps = 117/675 (17%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y +C L+ + VF+ MP T N V
Sbjct: 57 LYSRCSQLESSYLVFQTMP------------------------------------TKNTV 80
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A+I GF + E + + M +PN T +++ C + L+LG+ H
Sbjct: 81 SWTAMISGFALHNRVEPCLHLFASMMLSSCKPNDITFATLFSVCTKHALLALGRSVHALQ 140
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVG----------- 169
R GF S V N L+ +Y +CG + A IF + K+ VS N II G
Sbjct: 141 MRMGFHSYVHVSNALLSMYAKCGCIEEAQFIFGCIACKDLVSWNAIIFGCSQYVLAKHCL 200
Query: 170 -----------------------YCENGN-VAEARELFDQMEHLGVQRGIISWNSMISGY 205
C + V E R F M G++ G+ ++ M+
Sbjct: 201 DLLKEMERQHIVPDALSFLGVLSSCRHARLVEEGRHCFKTMIEHGIKPGLDHYSCMVDLL 260
Query: 206 VDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL--------------------------- 238
L +EA+ DL+ I P + +GS+L
Sbjct: 261 GRAGLLEEAW----DLIQTMSIPPNAVIWGSLLGSCRVHGNISIGIQAAEHRLKLEPGKG 316
Query: 239 -------------IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAA 285
+CAD +G ++H L + +G S F+G +L+ +Y R L ++
Sbjct: 317 ETSTDQSILAAAMSSCADRQMFTQGTQLHGLLVKVGCDSTVFIGSSLITLYSRCSQLESS 376
Query: 286 QMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSL 345
+ F + + GF + + LF+ M P+ T + S C++
Sbjct: 377 YLVFQTMPTKNTVSWTAMISGFALHNRVEPCLHLFASMRLSSCKPNDITFATLFSVCTNH 436
Query: 346 ATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAML 405
A + GK VHA +R G+ S VH+ AL+ MYAKCG + A+ + I+ DLVS NAM+
Sbjct: 437 ALLALGKSVHALQMRMGFHSYVHVSNALLSMYAKCGCIDEAQSIFGFIACKDLVSWNAMI 496
Query: 406 TAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVK 465
+ +G K + + + PD +SFL LS+C HA ++ G F M + +K
Sbjct: 497 FGCSQYGLAKHCLDLLKEMERQHIVPDALSFLGVLSSCRHARLVEEGRHCFKTMIEHGIK 556
Query: 466 PSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADR 525
P L HY+CMVDLL RAG L EA++ I+ + + P++V+WG+LLG C HGN+ G AA+
Sbjct: 557 PGLDHYSCMVDLLGRAGLLEEAWDLIQTMSIPPNAVIWGSLLGSCRVHGNISIGIQAAEH 616
Query: 526 LIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRA 585
++LEP ++ LANL+A G WSD+AR R MK R + + GCSWIE D+++ F A
Sbjct: 617 RLKLEPGCAATHIQLANLYATIGCWSDVARVRMAMKARGLKTNIGCSWIEVGDKVYSFTA 676
Query: 586 SDRSHDRSEEIYTII 600
+RS +S ++ ++
Sbjct: 677 ENRS--KSHQVNNVL 689
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 103/320 (32%), Positives = 170/320 (53%), Gaps = 4/320 (1%)
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
+ + +CAD +G ++H L + +G S F+G +L+ +Y R L ++ + F +
Sbjct: 16 LAAAMSSCADRQMFTQGTQLHGLLVKVGCDSTVFIGSSLITLYSRCSQLESSYLVFQTMP 75
Query: 294 NIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ 353
+ GF + + LF+ M+ P+ T + S C+ A + G+
Sbjct: 76 TKNTVSWTAMISGFALHNRVEPCLHLFASMMLSSCKPNDITFATLFSVCTKHALLALGRS 135
Query: 354 VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGH 413
VHA +R G+ S VH+ AL+ MYAKCG ++ A+ + I+ DLVS NA++ + +
Sbjct: 136 VHALQMRMGFHSYVHVSNALLSMYAKCGCIEEAQFIFGCIACKDLVSWNAIIFGCSQYVL 195
Query: 414 GKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTC 473
K + + + PD +SFL LS+C HA ++ G F M + +KP L HY+C
Sbjct: 196 AKHCLDLLKEMERQHIVPDALSFLGVLSSCRHARLVEEGRHCFKTMIEHGIKPGLDHYSC 255
Query: 474 MVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEP-- 531
MVDLL RAG L EA++ I+ + + P++V+WG+LLG C HGN+ G AA+ ++LEP
Sbjct: 256 MVDLLGRAGLLEEAWDLIQTMSIPPNAVIWGSLLGSCRVHGNISIGIQAAEHRLKLEPGK 315
Query: 532 --NNTGNYVMLANLFAYAGR 549
+T ++ A + + A R
Sbjct: 316 GETSTDQSILAAAMSSCADR 335
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 106/466 (22%), Positives = 184/466 (39%), Gaps = 49/466 (10%)
Query: 97 LSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFS 156
L++ + +CA Q + G + HG + + G S F+ + L+ +Y RC + S+ +F
Sbjct: 16 LAAAMSSCADRQMFTQGTQLHGLLVKVGCDSTVFIGSSLITLYSRCSQLESSYLVFQTMP 75
Query: 157 IKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFS 216
KN VS +I G+ + V LF M
Sbjct: 76 TKNTVSWTAMISGFALHNRVEPCLHLFASM------------------------------ 105
Query: 217 MFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMY 276
M +P TF ++ C L G+ +HAL + +G S V AL+ MY
Sbjct: 106 ------MLSSCKPNDITFATLFSVCTKHALLALGRSVHALQMRMGFHSYVHVSNALLSMY 159
Query: 277 CRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVG 336
+ + AQ F I + + G V + + L EM + PD +
Sbjct: 160 AKCGCIEEAQFIFGCIACKDLVSWNAIIFGCSQYVLAKHCLDLLKEMERQHIVPDALSFL 219
Query: 337 IILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST- 395
+LS+C +E G+ I G + + +VD+ + G L+ A + +S
Sbjct: 220 GVLSSCRHARLVEEGRHCFKTMIEHGIKPGLDHYSCMVDLLGRAGLLEEAWDLIQTMSIP 279
Query: 396 PDLVSQNAMLTAYAMHGHGKEGI--AHFRRILASG---FRPDHISFLSALSACVHAGSIK 450
P+ V ++L + +HG+ GI A R L G D +A+S+C
Sbjct: 280 PNAVIWGSLLGSCRVHGNISIGIQAAEHRLKLEPGKGETSTDQSILAAAMSSCADRQMFT 339
Query: 451 TGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGC 510
G++ L+ ++ + ++ L SR +L +Y + +P ++V W A++ G
Sbjct: 340 QGTQLHGLLVKVGCDSTVFIGSSLITLYSRCSQLESSYLVFQTMP-TKNTVSWTAMISGF 398
Query: 511 VSHGNLE--FGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLA 554
H +E A+ RL +PN+ + A LF+ + LA
Sbjct: 399 ALHNRVEPCLHLFASMRLSSCKPND----ITFATLFSVCTNHALLA 440
>gi|242076522|ref|XP_002448197.1| hypothetical protein SORBIDRAFT_06g022800 [Sorghum bicolor]
gi|241939380|gb|EES12525.1| hypothetical protein SORBIDRAFT_06g022800 [Sorghum bicolor]
Length = 766
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 178/585 (30%), Positives = 303/585 (51%), Gaps = 47/585 (8%)
Query: 22 DCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGM 81
D + N++VT + +G V + ER+ D L+SW ++I G Q G + +A+ +
Sbjct: 182 DLIVQNALVTMYSKSGSVGDGFALFERIRDKD-----LISWGSIIAGLAQQGREMDALQI 236
Query: 82 LFRMQAEGLE-PNARTLSSVLPACARL-QKLSLGKEFHGYITRNGFMSNPFVVNGLVDVY 139
M AEG+ PN SV AC+ + L G++ HG + N + L D+Y
Sbjct: 237 FREMIAEGVHHPNEFHFGSVFRACSVVVNSLEYGEQIHGVSVKYQLDRNSYAGCSLSDMY 296
Query: 140 RRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWN 199
RC ++ SA K+F + + ++SWN
Sbjct: 297 ARCNELDSARKVFYRIESPD-----------------------------------LVSWN 321
Query: 200 SMISGYVDNSLYDEAFSMFRDLLMRD-GIEPTSFTFGSVLIACADMNSLRKGKEIHALAI 258
S+I+ + L EA +F + MRD G+ P T ++L AC ++L +G+ IH+ +
Sbjct: 322 SLINAFSAKGLLSEAMVLFSE--MRDSGLRPDGITVMALLCACVGYDALHQGRSIHSYLV 379
Query: 259 ALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQ 318
LGL D V +L+ MY R D +A F E + + + + + + +
Sbjct: 380 KLGLGGDVIVSNSLLSMYARCLDFSSAMDVFHETHDRDVVTWNSILTACVQHQHLEDVFK 439
Query: 319 LFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYA 378
LFS + + D ++ +LSA + L E KQVHAYA + G D + L+D YA
Sbjct: 440 LFSLLHRSMPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKVGLVGDAMLSNGLIDTYA 499
Query: 379 KCGSLKHARLAYKRIST-PDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFL 437
KCGSL A ++ + T D+ S ++++ YA G+ KE + F R+ G +P+H++F+
Sbjct: 500 KCGSLDDANKLFEIMGTGRDVFSWSSLIVGYAQFGYAKEALDLFARMRNLGVKPNHVTFV 559
Query: 438 SALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPM 496
L+AC G + G ++ +M Y + P+ +H +C++DLL+RAG L EA +F+ ++P
Sbjct: 560 GVLTACSRVGLVDEGCYYYSIMKPEYGIVPTREHCSCVLDLLARAGRLSEAAKFVDQMPF 619
Query: 497 APDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLART 556
PD +MW LL +H +++ G+ AA+ ++ ++P+++ YV+L N++A +G W++ AR
Sbjct: 620 EPDIIMWKTLLAASRTHNDVDMGKRAAEGVLNIDPSHSAAYVLLCNIYASSGNWNEFARL 679
Query: 557 RQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
++ M+ + KSPG SWI+ + E+ F DRSH S+EIYT+++
Sbjct: 680 KKDMRSSGVQKSPGKSWIKLKGELKVFIVEDRSHPESDEIYTMLE 724
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 136/537 (25%), Positives = 222/537 (41%), Gaps = 74/537 (13%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYG+CG+ D A+ VF M +R N V
Sbjct: 91 MYGRCGAPDSARVVFDGMLDR------------------------------------NPV 114
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+AVI QN +A+G+ M G P+ L S + AC+ L L LG++ H
Sbjct: 115 SWAAVIAAHAQNSRCADAMGLFSSMLRSGTMPDQFALGSAICACSELGDLGLGRQVHAQA 174
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ S+ V N LV +Y + G + +F + K+ +S +II G + G +A
Sbjct: 175 IKWESGSDLIVQNALVTMYSKSGSVGDGFALFERIRDKDLISWGSIIAGLAQQGREMDAL 234
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
++F +M GV P F FGSV A
Sbjct: 235 QIFREMIAEGVH-----------------------------------HPNEFHFGSVFRA 259
Query: 241 CA-DMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
C+ +NSL G++IH +++ L +++ G +L +MY R +L +A+ F IE+ + +
Sbjct: 260 CSVVVNSLEYGEQIHGVSVKYQLDRNSYAGCSLSDMYARCNELDSARKVFYRIESPDLVS 319
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
+ F AM LFSEM L PD TV +L AC + +G+ +H+Y +
Sbjct: 320 WNSLINAFSAKGLLSEAMVLFSEMRDSGLRPDGITVMALLCACVGYDALHQGRSIHSYLV 379
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
+ G DV + +L+ MYA+C A + D+V+ N++LTA H H ++
Sbjct: 380 KLGLGGDVIVSNSLLSMYARCLDFSSAMDVFHETHDRDVVTWNSILTACVQHQHLEDVFK 439
Query: 420 HFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLS 479
F + S D IS + LSA G + + + ++D +
Sbjct: 440 LFSLLHRSMPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKVGLVGDAMLSNGLIDTYA 499
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE--FGQIAADRLIELEPNNT 534
+ G L +A + + + D W +L+ G G + A R + ++PN+
Sbjct: 500 KCGSLDDANKLFEIMGTGRDVFSWSSLIVGYAQFGYAKEALDLFARMRNLGVKPNHV 556
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 105/371 (28%), Positives = 183/371 (49%), Gaps = 18/371 (4%)
Query: 154 KFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDE 213
+F N + N +I Y G AR +FD M + R +SW ++I+ + NS +
Sbjct: 76 RFLAHNTILSNHLITMYGRCGAPDSARVVFDGM----LDRNPVSWAAVIAAHAQNSRCAD 131
Query: 214 AFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALV 273
A +F +L R G P F GS + AC+++ L G+++HA AI SD V ALV
Sbjct: 132 AMGLFSSML-RSGTMPDQFALGSAICACSELGDLGLGRQVHAQAIKWESGSDLIVQNALV 190
Query: 274 EMYCRYQDLVAAQMAFDEIENIE-----NLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDL 328
MY + + F+ I + + +++ + + G E +A+Q+F EM++ +
Sbjct: 191 TMYSKSGSVGDGFALFERIRDKDLISWGSIIAGLAQQGRE-----MDALQIFREMIAEGV 245
Query: 329 -TPDIYTVGIILSACSSLA-TMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHA 386
P+ + G + ACS + ++E G+Q+H +++ D + + G +L DMYA+C L A
Sbjct: 246 HHPNEFHFGSVFRACSVVVNSLEYGEQIHGVSVKYQLDRNSYAGCSLSDMYARCNELDSA 305
Query: 387 RLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHA 446
R + RI +PDLVS N+++ A++ G E + F + SG RPD I+ ++ L ACV
Sbjct: 306 RKVFYRIESPDLVSWNSLINAFSAKGLLSEAMVLFSEMRDSGLRPDGITVMALLCACVGY 365
Query: 447 GSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGAL 506
++ G + + + ++ + +R + A + + D V W ++
Sbjct: 366 DALHQGRSIHSYLVKLGLGGDVIVSNSLLSMYARCLDFSSAMDVFHET-HDRDVVTWNSI 424
Query: 507 LGGCVSHGNLE 517
L CV H +LE
Sbjct: 425 LTACVQHQHLE 435
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 98/416 (23%), Positives = 168/416 (40%), Gaps = 79/416 (18%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +C LD A+KVF + D VSWNS++ A +A GL+
Sbjct: 295 MYARCNELDSARKVFYRIESPDLVSWNSLINAFSAKGLL--------------------- 333
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
EA+ + M+ GL P+ T+ ++L AC L G+ H Y+
Sbjct: 334 ---------------SEAMVLFSEMRDSGLRPDGITVMALLCACVGYDALHQGRSIHSYL 378
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G + V N L+ +Y RC D SA+ +F + ++ V+ N+I+
Sbjct: 379 VKLGLGGDVIVSNSLLSMYARCLDFSSAMDVFHETHDRDVVTWNSILTACV--------- 429
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
Q +HL ++ F +F LL R + +VL A
Sbjct: 430 ----QHQHL----------------------EDVFKLF-SLLHRSMPSLDRISLNNVLSA 462
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
A++ K++HA A +GL D + L++ Y + L A F+ + ++
Sbjct: 463 SAELGYFEMVKQVHAYAFKVGLVGDAMLSNGLIDTYAKCGSLDDANKLFEIMGTGRDVFS 522
Query: 301 -KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
G+ Y A+ LF+ M +L + P+ T +L+ACS + ++ G + Y+I
Sbjct: 523 WSSLIVGYAQFGYAKEALDLFARMRNLGVKPNHVTFVGVLTACSRVGLVDEG--CYYYSI 580
Query: 360 ---RCGYDSDVHIGTALVDMYAKCGSLKH-ARLAYKRISTPDLVSQNAMLTAYAMH 411
G + ++D+ A+ G L A+ + PD++ +L A H
Sbjct: 581 MKPEYGIVPTREHCSCVLDLLARAGRLSEAAKFVDQMPFEPDIIMWKTLLAASRTH 636
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 132/283 (46%), Gaps = 8/283 (2%)
Query: 241 CADMNSLRKGKEIHALAIALG-----LQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
C+ + SL +G+ +H +A L +T + L+ MY R +A++ FD + +
Sbjct: 52 CSRLRSLPQGRLVHRHLLASSARDRFLAHNTILSNHLITMYGRCGAPDSARVVFDGMLDR 111
Query: 296 ENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVH 355
+ N +AM LFS ML PD + +G + ACS L + G+QVH
Sbjct: 112 NPVSWAAVIAAHAQNSRCADAMGLFSSMLRSGTMPDQFALGSAICACSELGDLGLGRQVH 171
Query: 356 AYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGK 415
A AI+ SD+ + ALV MY+K GS+ ++RI DL+S +++ A G
Sbjct: 172 AQAIKWESGSDLIVQNALVTMYSKSGSVGDGFALFERIRDKDLISWGSIIAGLAQQGREM 231
Query: 416 EGIAHFRRILASGF-RPDHISFLSALSAC-VHAGSIKTGSEFFDLMAYYDVKPSLKHYTC 473
+ + FR ++A G P+ F S AC V S++ G + + Y + +
Sbjct: 232 DALQIFREMIAEGVHHPNEFHFGSVFRACSVVVNSLEYGEQIHGVSVKYQLDRNSYAGCS 291
Query: 474 MVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNL 516
+ D+ +R EL A + +I +PD V W +L+ + G L
Sbjct: 292 LSDMYARCNELDSARKVFYRIE-SPDLVSWNSLINAFSAKGLL 333
>gi|297740626|emb|CBI30808.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 171/548 (31%), Positives = 299/548 (54%), Gaps = 16/548 (2%)
Query: 57 PNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEF 116
P++ ++ +I G+ +N + A+ + + M + + + +S++ C L++ ++
Sbjct: 24 PDVYLYTMMITGYARNYRFDHALQLFYEMPVK----DVVSWNSMIKGCFDCADLTMARKL 79
Query: 117 HGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNV 176
+ +S ++NG + G + A +F K ++ + N++I GYC NG V
Sbjct: 80 FDEMPERSVVSWTTMINGFLQF----GKIEVAEGLFYKMPFRDIAAWNSMIYGYCCNGRV 135
Query: 177 AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIE--PTSFTF 234
+ LF +M R +ISW SMI G + +EA +FR + M G+E PTS T+
Sbjct: 136 EDGLRLFQEMP----CRNVISWTSMIGGLDQHGRSEEALGLFRQM-MGCGVEVKPTSSTY 190
Query: 235 GSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIEN 294
V+ ACA+ ++L +G +IHA LG D ++ AL+ Y + + + F +
Sbjct: 191 CCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVFHGKLH 250
Query: 295 IENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV 354
+ ++ G+ N +A+++F EM+ + P+ + L++C L ++ G+++
Sbjct: 251 MNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCGLEALDWGREI 310
Query: 355 HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHG 414
H A++ G ++DV +G +L+ MY +CG+L + +KRIS ++VS N+++ A HG G
Sbjct: 311 HTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCG 370
Query: 415 KEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTC 473
+A F +++ S PD I+F LSAC H+G + G F + + L HY C
Sbjct: 371 MWALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCLFKYFSENKSAEVKLDHYAC 430
Query: 474 MVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNN 533
MVD+L R+G+L EA E I+ +P+ +S++W LL C H LE + AA +I+LEP+
Sbjct: 431 MVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLSACTMHSKLEVAERAAKCIIDLEPHC 490
Query: 534 TGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRS 593
+ YV+L+NL+A A RWSD++R R++MK R + K PG SWI + ++F + DRSH S
Sbjct: 491 SSAYVLLSNLYASASRWSDVSRIRREMKQRGITKQPGRSWITIKGWRNEFLSGDRSHPSS 550
Query: 594 EEIYTIID 601
+ IY ++
Sbjct: 551 DRIYQKLE 558
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 111/429 (25%), Positives = 188/429 (43%), Gaps = 83/429 (19%)
Query: 6 GSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAV 65
G ++ A+ +F MP RD +WNS++ NG V + L + M N++SW+++
Sbjct: 102 GKIEVAEGLFYKMPFRDIAAWNSMIYGYCCNGRVEDGLRLFQEMP-----CRNVISWTSM 156
Query: 66 IGGFTQNGYDEEAIGMLFRMQAEGLE--PNARTLSSVLPACARLQKLSLGKEFHGYITRN 123
IGG Q+G EEA+G+ +M G+E P + T V+ ACA L G + H ++ +
Sbjct: 157 IGGLDQHGRSEEALGLFRQMMGCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKL 216
Query: 124 GFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELF 183
G+ + ++ L+ Y C M +L++F N V ++ GY N +A ++F
Sbjct: 217 GYSFDAYISAALITFYANCKQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVF 276
Query: 184 DQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACAD 243
+M MR+G+ P +F S L +C
Sbjct: 277 GEM------------------------------------MREGVLPNQSSFTSALNSCCG 300
Query: 244 MNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMK 303
+ +L G+EIH A+ LGL++D FVG +L+ MY R +L + F I
Sbjct: 301 LEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRIS---------- 350
Query: 304 EDGFEPNVYTWN--------------AMQLFSEMLSLDLTPDIYTVGIILSACSSLATME 349
+ N+ +WN A+ F++M+ + PD T +LSACS +
Sbjct: 351 ----KKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQ 406
Query: 350 RGKQVHAYAIRCGYDSDVHIG--TALVDMYAKCGSLKHARLAYKRISTPDLVSQNAM--- 404
+G+ + Y ++V + +VD+ + G L+ A + + V N+M
Sbjct: 407 KGRCLFKYFSE-NKSAEVKLDHYACMVDILGRSGKLEEAEELIRNMP----VKANSMVWL 461
Query: 405 --LTAYAMH 411
L+A MH
Sbjct: 462 VLLSACTMH 470
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/379 (22%), Positives = 167/379 (44%), Gaps = 36/379 (9%)
Query: 148 ALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVD 207
A +F K S + +I GY N A +LF +M + ++SWNSMI G D
Sbjct: 14 ARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMP----VKDVVSWNSMIKGCFD 69
Query: 208 NSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGL----- 262
+ A +F ++ R + T+ G L+ GK + +A GL
Sbjct: 70 CADLTMARKLFDEMPERSVVSWTTMING----------FLQFGK----IEVAEGLFYKMP 115
Query: 263 QSDTFVGGALVEMYC---RYQD--LVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAM 317
D +++ YC R +D + +M + + +++G + + G A+
Sbjct: 116 FRDIAAWNSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSE-----EAL 170
Query: 318 QLFSEML--SLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVD 375
LF +M+ +++ P T +++AC++ + + +G Q+HA+ + GY D +I AL+
Sbjct: 171 GLFRQMMGCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALIT 230
Query: 376 MYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHIS 435
YA C ++ + + ++V A++T Y ++ ++ + F ++ G P+ S
Sbjct: 231 FYANCKQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSS 290
Query: 436 FLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIP 495
F SAL++C ++ G E ++ + ++ + R G L + K+I
Sbjct: 291 FTSALNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRIS 350
Query: 496 MAPDSVMWGALLGGCVSHG 514
+ V W +++ GC HG
Sbjct: 351 -KKNIVSWNSVIVGCAQHG 368
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +CG+L+D +FK + +++ VSWNSV+ CA +G + AL +M E P+ +
Sbjct: 332 MYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVE-PDEI 390
Query: 61 SWSAVIGGFTQNGYDEEA 78
+++ ++ + +G ++
Sbjct: 391 TFTGLLSACSHSGMSQKG 408
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 46/241 (19%), Positives = 102/241 (42%), Gaps = 17/241 (7%)
Query: 272 LVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPD 331
++ + R Q + A+ FD++ + L M G+ N +A+QLF EM D
Sbjct: 1 MITDHLRNQRIDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEM----PVKD 56
Query: 332 IYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYK 391
+ + ++ C A + +++ + V T +++ + + G ++ A +
Sbjct: 57 VVSWNSMIKGCFDCADLTMARKLFDEMP----ERSVVSWTTMINGFLQFGKIEVAEGLFY 112
Query: 392 RISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKT 451
++ D+ + N+M+ Y +G ++G+ F+ + IS+ S + G +
Sbjct: 113 KMPFRDIAAWNSMIYGYCCNGRVEDGLRLFQEMPCRNV----ISWTSMIGGLDQHGRSEE 168
Query: 452 GSEFFDLM--AYYDVKPSLKHYTCMVDLLSRAGELGEAYEF---IKKIPMAPDSVMWGAL 506
F M +VKP+ Y C++ + A L + + + K+ + D+ + AL
Sbjct: 169 ALGLFRQMMGCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAAL 228
Query: 507 L 507
+
Sbjct: 229 I 229
>gi|326507410|dbj|BAK03098.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 698
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 180/604 (29%), Positives = 292/604 (48%), Gaps = 76/604 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG DA ++F MPER N V
Sbjct: 145 MYAKCGRTRDACRLFDGMPER------------------------------------NTV 168
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A++ G+ ++G A+ + M+ EG P+ T +++L L + HG I
Sbjct: 169 SWNALVAGYVESGKVAPAVQLFVEMEREGFLPDEATFAALLTVVND-STCFLMHQLHGKI 227
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G V+N + Y +CG + A +R
Sbjct: 228 VKYGSALGLIVLNAAITAYSQCGAL-------------------------------ANSR 256
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+FD+ +G + +ISWN+M+ Y + + EA F ++ G++P ++F S++ A
Sbjct: 257 RIFDE---IGDRSDLISWNAMLGAYATHGMEHEAMRFFASMMRASGVQPDMYSFTSIISA 313
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQD---LVAAQMAFDEIENIEN 297
CA+ G IH L G + T V AL+ MY R+ + + A FD + +
Sbjct: 314 CAEHRD-HGGTVIHGLVSKNGFEGVTHVCNALIAMYTRFSENCMMEDAYKCFDSLLLKDT 372
Query: 298 LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAY 357
+ G+ + + +A++ F M S ++T D Y L +CS LA + G+Q+H
Sbjct: 373 VSWNSMLTGYSQHGLSADALRFFRCMQSENITTDEYAFSAALRSCSDLALLRLGRQIHGL 432
Query: 358 AIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEG 417
IR G+ S+ + ++L+ MY+K G L A +++ V N+M+ YA HG +
Sbjct: 433 VIRSGFASNNFVSSSLIFMYSKSGILDDAMKSFEEADKSSSVPWNSMMFGYAQHGKAQAV 492
Query: 418 IAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMVD 476
+ F ++L DHI+F+ ++AC HAG + GSE + M + Y + ++HY C +D
Sbjct: 493 RSLFNQMLELKVPLDHITFVGLITACSHAGLVDEGSEILNTMESRYGIPLRMEHYACGID 552
Query: 477 LLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGN 536
L RAG+L +A E I +P PD+++W LLG C HGN+E A L+E EP
Sbjct: 553 LYGRAGQLDKAKELIDSMPFEPDAMVWMTLLGACRVHGNMELASDVASHLLEAEPRQHST 612
Query: 537 YVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEI 596
YV+L+N+++ G WSD A +++MK++ + K PG SWIE ++E+H F A D SH R +EI
Sbjct: 613 YVLLSNMYSGLGMWSDRAIVQKEMKNKGLSKVPGWSWIEVKNEVHSFNAEDGSHPRMDEI 672
Query: 597 YTII 600
Y ++
Sbjct: 673 YEML 676
>gi|326488203|dbj|BAJ89940.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 637
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 173/502 (34%), Positives = 265/502 (52%), Gaps = 38/502 (7%)
Query: 98 SSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSI 157
+S+L +C L G++ HG + +G + + LVD+Y CG
Sbjct: 66 TSILQSCVASGSLRAGRQLHGRLLVSGLGPDTVLSTKLVDLYAACG-------------- 111
Query: 158 KNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSM 217
V AR LFD M +R + WN +I Y + A +
Sbjct: 112 -----------------QVGHARRLFDGMP----KRNVFLWNVLIRAYAREGPREAAVRL 150
Query: 218 FRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYC 277
+R ++ G+EP +FT+ VL ACA + L G+E+H D FV +V+MY
Sbjct: 151 YRGMV-EHGVEPDNFTYPLVLKACAALLDLETGREVHQRVSGTRWGQDVFVCAGVVDMYA 209
Query: 278 RYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGI 337
+ + A+ FD I + ++ + N A+ L +M + + P I T+
Sbjct: 210 KCGCVDDARAVFDGIAVRDAVVWNSMIAAYGQNGRPMEALALCRDMAANGIGPTIATLVS 269
Query: 338 ILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPD 397
+SA + A + RG+++H + R G+ + T+LVDMYAK G ++ AR+ ++++ +
Sbjct: 270 AVSAAADAAALPRGRELHGFGWRRGFGLQDKLKTSLVDMYAKSGWVQVARVLFEQLMKRE 329
Query: 398 LVSQNAMLTAYAMHGHGKEGIAHFRRILASG-FRPDHISFLSALSACVHAGSIKTGSEFF 456
LVS NAM+ Y MHGH E +A F ++ PD+I+F+ LSAC H G ++ EFF
Sbjct: 330 LVSWNAMICGYGMHGHADEALALFNKMKGDAQVTPDNITFVGVLSACNHGGMVEEAKEFF 389
Query: 457 DLMA-YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
LM Y +KP+++HYTC++D+L G EAY+ IK + + PDS +WGALL GC H N
Sbjct: 390 YLMVNAYSIKPTVQHYTCVIDVLGHTGRFEEAYDLIKGMSIEPDSGIWGALLNGCKIHKN 449
Query: 516 LEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIE 575
+E G++A +LIELEP + GNYV L+N++A +G+W AR R+ M +R + K CSWIE
Sbjct: 450 VELGELALQKLIELEPEDAGNYVHLSNIYAQSGKWEKAARVRKLMTNRGLKKILACSWIE 509
Query: 576 DRDEIHKFRASDRSHDRSEEIY 597
+ + H F D SH RS+EIY
Sbjct: 510 LKGKTHGFLVGDASHPRSDEIY 531
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 101/418 (24%), Positives = 174/418 (41%), Gaps = 83/418 (19%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y CG + A+++F MP+R+ WN ++ A
Sbjct: 106 LYAACGQVGHARRLFDGMPKRNVFLWNVLIRA---------------------------- 137
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+ + G E A+ + M G+EP+ T VL ACA L L G+E H +
Sbjct: 138 --------YAREGPREAAVRLYRGMVEHGVEPDNFTYPLVLKACAALLDLETGREVHQRV 189
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ + + FV G+VD+Y +CG + A +F ++++ V N++I Y +NG
Sbjct: 190 SGTRWGQDVFVCAGVVDMYAKCGCVDDARAVFDGIAVRDAVVWNSMIAAYGQNGRPM--- 246
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
EA ++ RD+ +GI PT T S + A
Sbjct: 247 --------------------------------EALALCRDMAA-NGIGPTIATLVSAVSA 273
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
AD +L +G+E+H G + +LV+MY + + A++ F+++ E +
Sbjct: 274 AADAAALPRGRELHGFGWRRGFGLQDKLKTSLVDMYAKSGWVQVARVLFEQLMKRELVSW 333
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLS-LDLTPDIYTVGIILSACSSLATMERGKQ-----V 354
G+ + + A+ LF++M +TPD T +LSAC+ +E K+ V
Sbjct: 334 NAMICGYGMHGHADEALALFNKMKGDAQVTPDNITFVGVLSACNHGGMVEEAKEFFYLMV 393
Query: 355 HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST-PDLVSQNAMLTAYAMH 411
+AY+I+ V T ++D+ G + A K +S PD A+L +H
Sbjct: 394 NAYSIK----PTVQHYTCVIDVLGHTGRFEEAYDLIKGMSIEPDSGIWGALLNGCKIH 447
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 128/297 (43%), Gaps = 40/297 (13%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG +DDA+ VF + RD V WNS+
Sbjct: 207 MYAKCGCVDDARAVFDGIAVRDAVVWNSM------------------------------- 235
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
I + QNG EA+ + M A G+ P TL S + A A L G+E HG+
Sbjct: 236 -----IAAYGQNGRPMEALALCRDMAANGIGPTIATLVSAVSAAADAAALPRGRELHGFG 290
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R GF + LVD+Y + G + A +F + + VS N +I GY +G+ EA
Sbjct: 291 WRRGFGLQDKLKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHADEAL 350
Query: 181 ELFDQME-HLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
LF++M+ V I++ ++S + +EA F ++ I+PT + V+
Sbjct: 351 ALFNKMKGDAQVTPDNITFVGVLSACNHGGMVEEAKEFFYLMVNAYSIKPTVQHYTCVID 410
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
+E + L + ++ D+ + GAL+ ++++ ++A ++ +E
Sbjct: 411 VLGHTGRF---EEAYDLIKGMSIEPDSGIWGALLNGCKIHKNVELGELALQKLIELE 464
>gi|255577487|ref|XP_002529622.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530907|gb|EEF32767.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 752
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 184/623 (29%), Positives = 309/623 (49%), Gaps = 86/623 (13%)
Query: 56 TPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKE 115
T N ++W+++I G+ ++ + A + M G N T + +L AC+ LG++
Sbjct: 130 TRNTITWTSLIKGYLEDNDFQSAFSIAGDMHKFGENFNEHTCTVILQACSSPDDRILGEQ 189
Query: 116 FHGYITRNGFMSNPFV---------VNGLVDV----------------------YRRCGD 144
H ++ ++GF N FV +G DV Y R G+
Sbjct: 190 IHCFVIKSGFDENVFVGTSLIAMYTKSGFFDVAEKVFDSMGFKDIRCLNFMILEYGRAGN 249
Query: 145 MLSALKIF----------SKFSIKNEVSC-----------------------------NT 165
A+++F + ++ N +S N
Sbjct: 250 GGKAIEVFKNLLNDGFEPTDYTFTNIISTCNGDLGVEEGKQLQGLAFKYGFLSETSVGNA 309
Query: 166 IIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRD 225
II Y +G EA +F M ++ +ISW ++ISGY + +A F L
Sbjct: 310 IITMYGNSGMPKEAERMFSSMS----EKNLISWTALISGYSRSGYGKKAVDAFLGLHDEL 365
Query: 226 GIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAA 285
GI S ++L C+D N+L G +IH + LG D V ALV++Y + + L +A
Sbjct: 366 GINFDSTLLTAILDCCSDCNNLELGLQIHGFVMKLGCACDVNVATALVDLYAKCEKLQSA 425
Query: 286 QMAFDEIENI------ENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIIL 339
++ FD + N L G ++ G E + M LF+++ + PD+ T +L
Sbjct: 426 RIVFDHLSNKGIASFNAILAGFLESSGDEED-----PMILFNQLRLAGVKPDMVTFSRLL 480
Query: 340 SACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLV 399
S ++ A++E+G+ HAY ++ G+D+++ + +++ MYAKCGS++ A + ++ D +
Sbjct: 481 SLLANQASLEKGRSFHAYTVKTGFDTNISVANSVISMYAKCGSIEDAHQMFNIMNCRDSI 540
Query: 400 SQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM 459
S NA+++AYA+HG ++ + F + GF PD + L+ L AC ++G K G F+LM
Sbjct: 541 SWNALISAYALHGQAQKSLFLFEEMKRKGFDPDEFTILAILQACTYSGLWKDGICLFNLM 600
Query: 460 -AYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEF 518
Y +KP L+HY CM DLL RAG L EA + IK+ P +++W L+ C HGNL F
Sbjct: 601 EPKYGIKPLLEHYACMADLLGRAGYLSEAMDIIKRSPFPKSTLLWRTLVNVCKLHGNLNF 660
Query: 519 GQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRD 578
G++A+ L++L P G+Y++++N++A + A+ R+ M D + K G SWIE +
Sbjct: 661 GKLASKHLLDLSPVEAGSYILVSNMYASEKMSDEAAKVRKVMNDLKFRKEAGSSWIEIDN 720
Query: 579 EIHKFRASDRSHDRSEEIYTIID 601
++H F ASD+ H S EIYT ++
Sbjct: 721 KVHHFVASDKDHPESREIYTRLE 743
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/379 (24%), Positives = 169/379 (44%), Gaps = 41/379 (10%)
Query: 112 LGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYC 171
LG+ H Y+ + G + F N ++++Y + F++ +
Sbjct: 85 LGQAVHSYLVKAGSQDDTFKGNNVLNLYVK----------FNRLDL-------------- 120
Query: 172 ENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTS 231
A+++FD+M R I+W S+I GY++++ + AFS+ D + + G
Sbjct: 121 -------AQKVFDRMR----TRNTITWTSLIKGYLEDNDFQSAFSIAGD-MHKFGENFNE 168
Query: 232 FTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDE 291
T +L AC+ + G++IH I G + FVG +L+ MY + A+ FD
Sbjct: 169 HTCTVILQACSSPDDRILGEQIHCFVIKSGFDENVFVGTSLIAMYTKSGFFDVAEKVFDS 228
Query: 292 I--ENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATME 349
+ ++I L + E G N A+++F +L+ P YT I+S C+ +E
Sbjct: 229 MGFKDIRCLNFMILEYGRAGN--GGKAIEVFKNLLNDGFEPTDYTFTNIISTCNGDLGVE 286
Query: 350 RGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYA 409
GKQ+ A + G+ S+ +G A++ MY G K A + +S +L+S A+++ Y+
Sbjct: 287 EGKQLQGLAFKYGFLSETSVGNAIITMYGNSGMPKEAERMFSSMSEKNLISWTALISGYS 346
Query: 410 MHGHGKEGIAHFRRILAS-GFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSL 468
G+GK+ + F + G D + L C +++ G + + +
Sbjct: 347 RSGYGKKAVDAFLGLHDELGINFDSTLLTAILDCCSDCNNLELGLQIHGFVMKLGCACDV 406
Query: 469 KHYTCMVDLLSRAGELGEA 487
T +VDL ++ +L A
Sbjct: 407 NVATALVDLYAKCEKLQSA 425
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 124/286 (43%), Gaps = 16/286 (5%)
Query: 250 GKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL------GKMK 303
G+ +H+ + G Q DTF G ++ +Y ++ L AQ FD + + G ++
Sbjct: 86 GQAVHSYLVKAGSQDDTFKGNNVLNLYVKFNRLDLAQKVFDRMRTRNTITWTSLIKGYLE 145
Query: 304 EDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGY 363
++ F+ M F E + +T +IL ACSS G+Q+H + I+ G+
Sbjct: 146 DNDFQSAFSIAGDMHKFGENF------NEHTCTVILQACSSPDDRILGEQIHCFVIKSGF 199
Query: 364 DSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRR 423
D +V +GT+L+ MY K G A + + D+ N M+ Y G+G + I F+
Sbjct: 200 DENVFVGTSLIAMYTKSGFFDVAEKVFDSMGFKDIRCLNFMILEYGRAGNGGKAIEVFKN 259
Query: 424 ILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGE 483
+L GF P +F + +S C ++ G + L Y ++ + +G
Sbjct: 260 LLNDGFEPTDYTFTNIISTCNGDLGVEEGKQLQGLAFKYGFLSETSVGNAIITMYGNSGM 319
Query: 484 LGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIEL 529
EA + + + W AL+ G G +G+ A D + L
Sbjct: 320 PKEAERMFSSMS-EKNLISWTALISGYSRSG---YGKKAVDAFLGL 361
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/345 (22%), Positives = 141/345 (40%), Gaps = 74/345 (21%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYG G +A+++F M E++ +SW
Sbjct: 313 MYGNSGMPKEAERMFSSMSEKNLISW---------------------------------- 338
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
+A+I G++++GY ++A+ + E G+ ++ L+++L C+ L LG + HG+
Sbjct: 339 --TALISGYSRSGYGKKAVDAFLGLHDELGINFDSTLLTAILDCCSDCNNLELGLQIHGF 396
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCE-NGNVAE 178
+ + G + V LVD+Y +C + SA +F S K S N I+ G+ E +G+ +
Sbjct: 397 VMKLGCACDVNVATALVDLYAKCEKLQSARIVFDHLSNKGIASFNAILAGFLESSGDEED 456
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
LF+Q+ GV+ P TF +L
Sbjct: 457 PMILFNQLRLAGVK------------------------------------PDMVTFSRLL 480
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
A+ SL KG+ HA + G ++ V +++ MY + + A F+ + +++
Sbjct: 481 SLLANQASLEKGRSFHAYTVKTGFDTNISVANSVISMYAKCGSIEDAHQMFNIMNCRDSI 540
Query: 299 LGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACS 343
+ + ++ LF EM PD +T+ IL AC+
Sbjct: 541 SWNALISAYALHGQAQKSLFLFEEMKRKGFDPDEFTILAILQACT 585
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 75/146 (51%), Gaps = 5/146 (3%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGS++DA ++F +M RD +SWN++++A A +G ++L E M + P+
Sbjct: 517 MYAKCGSIEDAHQMFNIMNCRDSISWNALISAYALHGQAQKSLFLFEEMKRKGFD-PDEF 575
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
+ A++ T +G ++ I + M+ + G++P + + R LS E
Sbjct: 576 TILAILQACTYSGLWKDGICLFNLMEPKYGIKPLLEHYACMADLLGRAGYLS---EAMDI 632
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDM 145
I R+ F + + LV+V + G++
Sbjct: 633 IKRSPFPKSTLLWRTLVNVCKLHGNL 658
>gi|218197313|gb|EEC79740.1| hypothetical protein OsI_21088 [Oryza sativa Indica Group]
Length = 1068
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 193/601 (32%), Positives = 301/601 (50%), Gaps = 78/601 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K +D A +VFK M E+D +V
Sbjct: 443 MYAKSKHIDKAIEVFKFMAEKD------------------------------------VV 466
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SWS++I GF N +A+ FR ++PN+ T + L ACA L GKE H Y+
Sbjct: 467 SWSSMIAGFCFNHRSFDAL-YYFRYMLGHVKPNSVTFIAALSACAATGALRSGKEIHAYV 525
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R G S +V N L+D+Y +CG A +++FS+ +E
Sbjct: 526 LRCGIGSEGYVPNALLDLYVKCGQTSYA---WAQFSVHSE-------------------- 562
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+ ++SWN M+SG+V + L D A S+F ++ S L A
Sbjct: 563 ------------KDVVSWNIMLSGFVAHGLGDIALSLFNQMMY---TSLGRMGACSALAA 607
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA + L G ++H LA G V AL+EMY + + + A F + + +
Sbjct: 608 CACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSW 667
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
GF N +++A+ F ML + P+ T LSAC++ + GK++HAY +R
Sbjct: 668 SSMIAGFCFNHRSFDALYYFRYMLG-HVKPNSVTFIAALSACAATGALRSGKEIHAYVLR 726
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
CG S+ ++ AL+D+Y KCG +A + S D+VS N ML+ + HG G ++
Sbjct: 727 CGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSL 786
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLLS 479
F +++ G PD ++F+ + AC AG + G E F + + P+LKHY CMVDLLS
Sbjct: 787 FNQMVEMGEHPDEVTFV-LMCACSRAGMVIQGWELFHRRTEKFSIVPNLKHYACMVDLLS 845
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
R G+L EAY I ++P+ PD+ +WGALL GC H ++E G++AA ++ELEPN+ +V+
Sbjct: 846 RVGKLTEAYNLINRMPIKPDAAVWGALLNGCRIHRHVELGELAAKVILELEPNDVAYHVL 905
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTI 599
L +L+ AG+W+ +AR R+ M+++ + + GCSW+E + H F D SH + +EI +
Sbjct: 906 LCDLYTDAGKWAQVARVRKTMREKGLEQDNGCSWVEVKGVTHAFLTDDESHPQIKEINVV 965
Query: 600 I 600
+
Sbjct: 966 L 966
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 123/496 (24%), Positives = 230/496 (46%), Gaps = 46/496 (9%)
Query: 27 NSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQ 86
N++++ G + A +M D + SW+ ++GG+ + G+ EEA+ + +RM
Sbjct: 135 NAMLSMLVRFGEIWHAWRVFAKMPERD-----VFSWNVMVGGYGKVGFLEEALDLYYRML 189
Query: 87 AEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDML 146
G+ P+ T VL C + +G+E H ++ R GF V+N LV +Y +C
Sbjct: 190 WAGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKC---- 245
Query: 147 SALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYV 206
G++ AR++FD M ISWN+MI+G+
Sbjct: 246 ---------------------------GDIVAARKVFDGM----AMTDCISWNAMIAGHF 274
Query: 207 DNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDT 266
+N + +F +L + ++P T SV +A ++ + KE+H A+ G D
Sbjct: 275 ENHECEAGLELFLTML-ENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAIDV 333
Query: 267 FVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSL 326
+L++MY + A F +E + + G+E N + A+++++ M
Sbjct: 334 AFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALMELH 393
Query: 327 DLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHA 386
++ PD T+ L+AC+ L ++ G ++H A G+ V + AL++MYAK + A
Sbjct: 394 NVNPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKA 453
Query: 387 RLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHA 446
+K ++ D+VS ++M+ + + + + +FR +L +P+ ++F++ALSAC
Sbjct: 454 IEVFKFMAEKDVVSWSSMIAGFCFNHRSFDALYYFRYMLGH-VKPNSVTFIAALSACAAT 512
Query: 447 GSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGAL 506
G++++G E + + ++DL + G+ A+ + D V W +
Sbjct: 513 GALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQF-SVHSEKDVVSWNIM 571
Query: 507 LGGCVSHGNLEFGQIA 522
L G V+HG G IA
Sbjct: 572 LSGFVAHG---LGDIA 584
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 137/535 (25%), Positives = 232/535 (43%), Gaps = 77/535 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG + A+KVF M DC+
Sbjct: 241 MYAKCGDIVAARKVFDGMAMTDCI------------------------------------ 264
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A+I G +N E + + M ++PN T++SV A L ++ KE HG+
Sbjct: 265 SWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFA 324
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ GF +DV CN++I Y G + +A
Sbjct: 325 VKRGFA---------IDV----------------------AFCNSLIQMYTSLGRMGDAG 353
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
++F +ME + +SW +MISGY N D+A ++ L+ + P T S L A
Sbjct: 354 KIFSRME----TKDAMSWTAMISGYEKNGFPDKALEVYA-LMELHNVNPDDVTIASALAA 408
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA + L G ++H LA G V AL+EMY + + + A F + + +
Sbjct: 409 CACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSW 468
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
GF N +++A+ F ML + P+ T LSAC++ + GK++HAY +R
Sbjct: 469 SSMIAGFCFNHRSFDALYYFRYMLG-HVKPNSVTFIAALSACAATGALRSGKEIHAYVLR 527
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
CG S+ ++ AL+D+Y KCG +A + S D+VS N ML+ + HG G ++
Sbjct: 528 CGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSL 587
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSR 480
F +++ + + SAL+AC G + G + +L + ++++ ++
Sbjct: 588 FNQMMYTSL--GRMGACSALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAK 645
Query: 481 AGELGEAYEFIKKIPMAPDSVMWGALLGG-CVSHGNLEFGQIAADRLIELEPNNT 534
+ + +A E K + D V W +++ G C +H + + L ++PN+
Sbjct: 646 SKHIDKAIEVFKFMA-EKDVVSWSSMIAGFCFNHRSFDALYYFRYMLGHVKPNSV 699
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 168/362 (46%), Gaps = 7/362 (1%)
Query: 174 GNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFT 233
G + A +F +M +R + SWN M+ GY +EA ++ +L G+ P +T
Sbjct: 145 GEIWHAWRVFAKMP----ERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWA-GMRPDVYT 199
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
F VL C + R G+E+HA + G + V ALV MY + D+VAA+ FD +
Sbjct: 200 FPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMA 259
Query: 294 NIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ 353
+ + G N ++LF ML ++ P++ T+ + A L+ + K+
Sbjct: 260 MTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKE 319
Query: 354 VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGH 413
+H +A++ G+ DV +L+ MY G + A + R+ T D +S AM++ Y +G
Sbjct: 320 MHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGF 379
Query: 414 GKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTC 473
+ + + + PD ++ SAL+AC G + G + +L +
Sbjct: 380 PDKALEVYALMELHNVNPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANA 439
Query: 474 MVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG-CVSHGNLEFGQIAADRLIELEPN 532
++++ +++ + +A E K + D V W +++ G C +H + + L ++PN
Sbjct: 440 LLEMYAKSKHIDKAIEVFKFMA-EKDVVSWSSMIAGFCFNHRSFDALYYFRYMLGHVKPN 498
Query: 533 NT 534
+
Sbjct: 499 SV 500
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 112/247 (45%), Gaps = 1/247 (0%)
Query: 268 VGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLD 327
+G A++ M R+ ++ A F ++ + + G+ + A+ L+ ML
Sbjct: 133 LGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAG 192
Query: 328 LTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHAR 387
+ PD+YT +L C + G++VHA+ +R G+ +V + ALV MYAKCG + AR
Sbjct: 193 MRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAAR 252
Query: 388 LAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAG 447
+ ++ D +S NAM+ + + + G+ F +L + +P+ ++ S A
Sbjct: 253 KVFDGMAMTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLS 312
Query: 448 SIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALL 507
+ E + ++ + + G +G+A + ++ D++ W A++
Sbjct: 313 EVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRME-TKDAMSWTAMI 371
Query: 508 GGCVSHG 514
G +G
Sbjct: 372 SGYEKNG 378
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 67/153 (43%), Gaps = 1/153 (0%)
Query: 367 VHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILA 426
+ +G A++ M + G + HA + ++ D+ S N M+ Y G +E + + R+L
Sbjct: 131 LRLGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLW 190
Query: 427 SGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGE 486
+G RPD +F L C + G E + + + +V + ++ G++
Sbjct: 191 AGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVA 250
Query: 487 AYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFG 519
A + + M D + W A++ G + E G
Sbjct: 251 ARKVFDGMAMT-DCISWNAMIAGHFENHECEAG 282
>gi|449447569|ref|XP_004141540.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71490-like [Cucumis sativus]
gi|449481506|ref|XP_004156203.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71490-like [Cucumis sativus]
Length = 712
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 176/553 (31%), Positives = 284/553 (51%), Gaps = 8/553 (1%)
Query: 55 ETPNLV---SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLS 111
ET NL SW+ +I + ++ E AI +M ++G+ P+ T S+L AC Q L
Sbjct: 138 ETSNLFRPCSWNILITSYVKHKLYEAAILAYKQMVSKGVRPDNFTFPSILKACGETQNLK 197
Query: 112 LGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYC 171
G E H I + FV N L+ +Y RCG++ +A +F ++ VS N++I Y
Sbjct: 198 FGLEVHKSINSWSTPWSLFVHNALISMYGRCGEVDTARNLFDNMLERDAVSWNSMISCYS 257
Query: 172 ENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRD-GIEPT 230
G EA ELF+ M+ ++ +++WN + G + + +A + MR+ GI
Sbjct: 258 SRGMWREAFELFESMQSKCLEINVVTWNIIAGGCLRVGNFTQALKLLSQ--MRNFGIHLD 315
Query: 231 SFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFD 290
L AC+ + ++R GKEIH I + V ALV MY R +D+ A M F
Sbjct: 316 DVAMIIGLGACSHIGAIRLGKEIHGFTIRHYHHMLSTVQNALVTMYARCKDIRHAYMLFR 375
Query: 291 EIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMER 350
++ + G A+ LF E+L + PD T IL C+ +A ++
Sbjct: 376 LNDDKSRITWNSMLSGLTHLGRVEEALCLFRELLLFGVEPDYVTFASILPLCARVADLQH 435
Query: 351 GKQVHAYAIRC-GYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYA 409
G++ H Y + + + + ALVDMYA+ G + A+ + +S D V+ +++ Y
Sbjct: 436 GREFHCYITKHRDFRDHLLLWNALVDMYARAGKVSEAKRIFYSLSKKDEVTYTSLIAGYG 495
Query: 410 MHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFF-DLMAYYDVKPSL 468
M G G + + F + +PDHI+ ++ LSAC H+G + F ++ + + + P L
Sbjct: 496 MQGEGGKAVRLFEEMKRFQIKPDHITMIAVLSACSHSGLVNQAELLFAEMQSVHGLSPRL 555
Query: 469 KHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIE 528
+HY CM DL R G L +A E I ++P P S +W L+G C HGN++ G+ AA++L+E
Sbjct: 556 EHYACMADLFGRVGLLNKAKEIITRMPYRPTSAIWATLIGACCIHGNMDIGEWAAEKLLE 615
Query: 529 LEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDR 588
+ P ++G YV++AN++A AG WS LA R M+D + K PGCSW++ E F D
Sbjct: 616 MRPEHSGYYVLIANMYAAAGSWSKLAEIRTLMRDSGVAKIPGCSWVDVGSEFISFSVGDT 675
Query: 589 SHDRSEEIYTIID 601
S ++ E ++D
Sbjct: 676 SSPQALESKLLLD 688
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 118/452 (26%), Positives = 201/452 (44%), Gaps = 75/452 (16%)
Query: 95 RTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSK 154
+++S +L +C + L GK+ HG+I +G + + F+V+ LV Y S+L+
Sbjct: 80 QSISILLVSCTKSSSLPPGKQLHGHIISSGLVEDSFLVSKLVMFY-------SSLEFLP- 131
Query: 155 FSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEA 214
E + E LF SWN +I+ YV + LY+ A
Sbjct: 132 -----------------EAHTLVETSNLFRP----------CSWNILITSYVKHKLYEAA 164
Query: 215 FSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVE 274
++ ++ + G+ P +FTF S+L AC + +L+ G E+H + FV AL+
Sbjct: 165 ILAYKQMVSK-GVRPDNFTFPSILKACGETQNLKFGLEVHKSINSWSTPWSLFVHNALIS 223
Query: 275 MYCRYQDLVAAQMAFDEI----------------------ENIENLLGKMKEDGFEPNVY 312
MY R ++ A+ FD + E E L M+ E NV
Sbjct: 224 MYGRCGEVDTARNLFDNMLERDAVSWNSMISCYSSRGMWREAFE-LFESMQSKCLEINVV 282
Query: 313 TWN--------------AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYA 358
TWN A++L S+M + + D + I L ACS + + GK++H +
Sbjct: 283 TWNIIAGGCLRVGNFTQALKLLSQMRNFGIHLDDVAMIIGLGACSHIGAIRLGKEIHGFT 342
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGI 418
IR + + ALV MYA+C ++HA + ++ ++ N+ML+ G +E +
Sbjct: 343 IRHYHHMLSTVQNALVTMYARCKDIRHAYMLFRLNDDKSRITWNSMLSGLTHLGRVEEAL 402
Query: 419 AHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFF-DLMAYYDVKPSLKHYTCMVDL 477
FR +L G PD+++F S L C ++ G EF + + D + L + +VD+
Sbjct: 403 CLFRELLLFGVEPDYVTFASILPLCARVADLQHGREFHCYITKHRDFRDHLLLWNALVDM 462
Query: 478 LSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
+RAG++ EA + D V + +L+ G
Sbjct: 463 YARAGKVSEAKRIFYSLS-KKDEVTYTSLIAG 493
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 118/436 (27%), Positives = 195/436 (44%), Gaps = 42/436 (9%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYG+CG +D A+ +F M ERD VSWNS+++ ++ G+ EA E E M S E N+V
Sbjct: 224 MYGRCGEVDTARNLFDNMLERDAVSWNSMISCYSSRGMWREAFELFESMQSKCLEI-NVV 282
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+ + GG + G +A+ +L +M+ G+ + + L AC+ + + LGKE HG+
Sbjct: 283 TWNIIAGGCLRVGNFTQALKLLSQMRNFGIHLDDVAMIIGLGACSHIGAIRLGKEIHGFT 342
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R+ V N LV +Y RC D+ A +F K+ ++ N+++ G G V EA
Sbjct: 343 IRHYHHMLSTVQNALVTMYARCKDIRHAYMLFRLNDDKSRITWNSMLSGLTHLGRVEEAL 402
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LF R+LL+ G+EP TF S+L
Sbjct: 403 CLF-----------------------------------RELLLF-GVEPDYVTFASILPL 426
Query: 241 CADMNSLRKGKEIHA-LAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
CA + L+ G+E H + + + ALV+MY R + A+ F + + +
Sbjct: 427 CARVADLQHGREFHCYITKHRDFRDHLLLWNALVDMYARAGKVSEAKRIFYSLSKKDEVT 486
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
G+ A++LF EM + PD T+ +LSACS + + + + A
Sbjct: 487 YTSLIAGYGMQGEGGKAVRLFEEMKRFQIKPDHITMIAVLSACSHSGLVNQAELLFAEMQ 546
Query: 360 RC-GYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNAMLTAYAMHGHGKEG 417
G + + D++ + G L A+ R+ P ++ A +HG+ G
Sbjct: 547 SVHGLSPRLEHYACMADLFGRVGLLNKAKEIITRMPYRPTSAIWATLIGACCIHGNMDIG 606
Query: 418 IAHFRRILASGFRPDH 433
++L RP+H
Sbjct: 607 EWAAEKLLE--MRPEH 620
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/375 (21%), Positives = 151/375 (40%), Gaps = 52/375 (13%)
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
+L++C +SL GK++H I+ GL D+F+ LV Y + L A +
Sbjct: 85 LLVSCTKSSSLPPGKQLHGHIISSGLVEDSFLVSKLVMFYSSLEFLPEAHTLVETSNLFR 144
Query: 297 NLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHA 356
+ + + A+ + +M+S + PD +T IL AC ++ G +VH
Sbjct: 145 PCSWNILITSYVKHKLYEAAILAYKQMVSKGVRPDNFTFPSILKACGETQNLKFGLEVHK 204
Query: 357 YAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKE 416
+ + AL+ MY +CG + AR + + D VS N+M++ Y+ G +E
Sbjct: 205 SINSWSTPWSLFVHNALISMYGRCGEVDTARNLFDNMLERDAVSWNSMISCYSSRGMWRE 264
Query: 417 GIAHFRRILAS-----------------------------------GFRPDHISFLSALS 441
F + + G D ++ + L
Sbjct: 265 AFELFESMQSKCLEINVVTWNIIAGGCLRVGNFTQALKLLSQMRNFGIHLDDVAMIIGLG 324
Query: 442 ACVHAGSIKTGSEF--FDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPD 499
AC H G+I+ G E F + Y+ + ++++ +V + +R ++ AY + ++
Sbjct: 325 ACSHIGAIRLGKEIHGFTIRHYHHMLSTVQN--ALVTMYARCKDIRHAY-MLFRLNDDKS 381
Query: 500 SVMWGALLGGCVSHGNLEFGQIAADRLI--ELEPNNTGNYVMLANLFAYAGRWSDLARTR 557
+ W ++L G G +E L+ +EP +YV A++ R +DL R
Sbjct: 382 RITWNSMLSGLTHLGRVEEALCLFRELLLFGVEP----DYVTFASILPLCARVADLQHGR 437
Query: 558 Q------KMKDRRMH 566
+ K +D R H
Sbjct: 438 EFHCYITKHRDFRDH 452
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 95/193 (49%), Gaps = 9/193 (4%)
Query: 325 SLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLK 384
S DL + ++ I+L +C+ +++ GKQ+H + I G D + + LV Y+ SL+
Sbjct: 74 SFDLI--LQSISILLVSCTKSSSLPPGKQLHGHIISSGLVEDSFLVSKLVMFYS---SLE 128
Query: 385 HARLAYKRISTPDLV---SQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALS 441
A+ + T +L S N ++T+Y H + I ++++++ G RPD+ +F S L
Sbjct: 129 FLPEAHTLVETSNLFRPCSWNILITSYVKHKLYEAAILAYKQMVSKGVRPDNFTFPSILK 188
Query: 442 ACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSV 501
AC ++K G E + + SL + ++ + R GE+ A + + D+V
Sbjct: 189 ACGETQNLKFGLEVHKSINSWSTPWSLFVHNALISMYGRCGEVDTARNLFDNM-LERDAV 247
Query: 502 MWGALLGGCVSHG 514
W +++ S G
Sbjct: 248 SWNSMISCYSSRG 260
>gi|356577059|ref|XP_003556647.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 821
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 191/600 (31%), Positives = 298/600 (49%), Gaps = 74/600 (12%)
Query: 4 KCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWS 63
K G L DA+KVF MPE+D V WN
Sbjct: 192 KRGYLADAQKVFDGMPEKDVVCWN------------------------------------ 215
Query: 64 AVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRN 123
++IGG+ Q G E+I M M GL P+ T++++L AC + +G H Y+
Sbjct: 216 SIIGGYVQKGLFWESIQMFLEMIGGGLRPSPVTMANLLKACGQSGLKKVGMCAHSYVLAL 275
Query: 124 GFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELF 183
G ++ FV+ LVD+Y GD SA +F ++ +S N +I GY +NG + E+ LF
Sbjct: 276 GMGNDVFVLTSLVDMYSNLGDTGSAALVFDSMCSRSLISWNAMISGYVQNGMIPESYALF 335
Query: 184 DQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACAD 243
++ VQ G SG+ S T S++ C+
Sbjct: 336 RRL----VQSG--------SGF------------------------DSGTLVSLIRGCSQ 359
Query: 244 MNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMK 303
+ L G+ +H+ I L+S + A+V+MY + + A + F + +
Sbjct: 360 TSDLENGRILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGRMGKKNVITWTAM 419
Query: 304 EDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGY 363
G N Y +A++LF +M + + T+ ++ C+ L ++ +G+ VHA+ IR GY
Sbjct: 420 LVGLSQNGYAEDALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHFIRHGY 479
Query: 364 DSDVHIGTALVDMYAKCGSLKHA-RLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFR 422
D I +AL+DMYAKCG + A +L D++ N+M+ Y MHGHG+ + +
Sbjct: 480 AFDAVITSALIDMYAKCGKIHSAEKLFNNEFHLKDVILCNSMIMGYGMHGHGRYALGVYS 539
Query: 423 RILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRA 481
R++ +P+ +F+S L+AC H+G ++ G F M +DV+P KHY C+VDL SRA
Sbjct: 540 RMIEERLKPNQTTFVSLLTACSHSGLVEEGKALFHSMERDHDVRPQHKHYACLVDLHSRA 599
Query: 482 GELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLA 541
G L EA E +K++P P + + ALL GC +H N G ADRLI L+ N+G YVML+
Sbjct: 600 GRLEEADELVKQMPFQPSTDVLEALLSGCRTHKNTNMGIQIADRLISLDYLNSGIYVMLS 659
Query: 542 NLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
N++A A +W + R M+ + M K PG S IE ++++ F ASD SH +IY +++
Sbjct: 660 NIYAEARKWESVNYIRGLMRMQGMKKIPGYSLIEVGNKVYTFFASDDSHPSWADIYQLLE 719
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 125/522 (23%), Positives = 231/522 (44%), Gaps = 45/522 (8%)
Query: 57 PNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKE 115
P +A+I GF +N E + LFRM +E N+ T L AC L +G E
Sbjct: 108 PETAVCNAMIAGFLRNQQHME-VPRLFRMMGSCDIEINSYTCMFALKACTDLLDDEVGME 166
Query: 116 FHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGN 175
R GF + +V + +V+ + G + A K+F K+ V N+II GY
Sbjct: 167 IIRAAVRRGFHLHLYVGSSMVNFLVKRGYLADAQKVFDGMPEKDVVCWNSIIGGY----- 221
Query: 176 VAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFG 235
VQ+G L+ E+ MF +++ G+ P+ T
Sbjct: 222 ---------------VQKG---------------LFWESIQMFLEMI-GGGLRPSPVTMA 250
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
++L AC + G H+ +ALG+ +D FV +LV+MY D +A + FD + +
Sbjct: 251 NLLKACGQSGLKKVGMCAHSYVLALGMGNDVFVLTSLVDMYSNLGDTGSAALVFDSMCSR 310
Query: 296 ENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVH 355
+ G+ N + LF ++ D T+ ++ CS + +E G+ +H
Sbjct: 311 SLISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSLIRGCSQTSDLENGRILH 370
Query: 356 AYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGK 415
+ IR +S + + TA+VDMY+KCG++K A + + R+ ++++ AML + +G+ +
Sbjct: 371 SCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGRMGKKNVITWTAMLVGLSQNGYAE 430
Query: 416 EGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMV 475
+ + F ++ + ++ +S + C H GS+ G + + ++
Sbjct: 431 DALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHFIRHGYAFDAVITSALI 490
Query: 476 DLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIE--LEPNN 533
D+ ++ G++ A + D ++ +++ G HG+ + R+IE L+PN
Sbjct: 491 DMYAKCGKIHSAEKLFNNEFHLKDVILCNSMIMGYGMHGHGRYALGVYSRMIEERLKPNQ 550
Query: 534 TGNYVMLANLFAYAGRWSD---LARTRQKMKD-RRMHKSPGC 571
T +V L +++G + L + ++ D R HK C
Sbjct: 551 T-TFVSLLTACSHSGLVEEGKALFHSMERDHDVRPQHKHYAC 591
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 109/413 (26%), Positives = 181/413 (43%), Gaps = 27/413 (6%)
Query: 157 IKNEVSCNTIIVG-----YCENGNVAEARELFDQ--MEHLGVQRGIISWNSMISGYVDNS 209
IKN VS + + Y + G + AR +FDQ + V N+MI+G++ N
Sbjct: 71 IKNWVSTESFLAAKLIRVYSDLGFLGHARNVFDQCSLPETAV------CNAMIAGFLRNQ 124
Query: 210 LYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVG 269
+ E +FR + D IE S+T L AC D+ G EI A+ G +VG
Sbjct: 125 QHMEVPRLFRMMGSCD-IEINSYTCMFALKACTDLLDDEVGMEIIRAAVRRGFHLHLYVG 183
Query: 270 GALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLT 329
++V + L AQ FD + + + G+ W ++Q+F EM+ L
Sbjct: 184 SSMVNFLVKRGYLADAQKVFDGMPEKDVVCWNSIIGGYVQKGLFWESIQMFLEMIGGGLR 243
Query: 330 PDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLA 389
P T+ +L AC + G H+Y + G +DV + T+LVDMY+ G A L
Sbjct: 244 PSPVTMANLLKACGQSGLKKVGMCAHSYVLALGMGNDVFVLTSLVDMYSNLGDTGSAALV 303
Query: 390 YKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSI 449
+ + + L+S NAM++ Y +G E A FRR++ SG D + +S + C +
Sbjct: 304 FDSMCSRSLISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSLIRGCSQTSDL 363
Query: 450 KTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
+ G + +++ L T +VD+ S+ G + +A ++ + + W A+L G
Sbjct: 364 ENGRILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGRMG-KKNVITWTAMLVG 422
Query: 510 CVSHGNLE-----FGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTR 557
+G E F Q+ +++ N V L +L L + R
Sbjct: 423 LSQNGYAEDALKLFCQMQEEKV-------AANSVTLVSLVHCCAHLGSLTKGR 468
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 125/284 (44%), Gaps = 1/284 (0%)
Query: 245 NSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKE 304
N+L K IHA I + +++F+ L+ +Y L A+ FD+ E +
Sbjct: 58 NTLIHVKSIHAQIIKNWVSTESFLAAKLIRVYSDLGFLGHARNVFDQCSLPETAVCNAMI 117
Query: 305 DGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYD 364
GF N +LF M S D+ + YT L AC+ L E G ++ A+R G+
Sbjct: 118 AGFLRNQQHMEVPRLFRMMGSCDIEINSYTCMFALKACTDLLDDEVGMEIIRAAVRRGFH 177
Query: 365 SDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRI 424
+++G+++V+ K G L A+ + + D+V N+++ Y G E I F +
Sbjct: 178 LHLYVGSSMVNFLVKRGYLADAQKVFDGMPEKDVVCWNSIIGGYVQKGLFWESIQMFLEM 237
Query: 425 LASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGEL 484
+ G RP ++ + L AC +G K G + + + T +VD+ S G+
Sbjct: 238 IGGGLRPSPVTMANLLKACGQSGLKKVGMCAHSYVLALGMGNDVFVLTSLVDMYSNLGDT 297
Query: 485 GEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIE 528
G A + + + W A++ G V +G + RL++
Sbjct: 298 GSAALVFDSM-CSRSLISWNAMISGYVQNGMIPESYALFRRLVQ 340
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/295 (21%), Positives = 127/295 (43%), Gaps = 66/295 (22%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERM----SSLDNET 56
MY G A VF M R +SWN++++ NG++ E+ R+ S D+ T
Sbjct: 290 MYSNLGDTGSAALVFDSMCSRSLISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGT 349
Query: 57 ------------------------------PNLVSWSAVIGGFTQNGYDEEA-------- 78
+LV +A++ +++ G ++A
Sbjct: 350 LVSLIRGCSQTSDLENGRILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGRMG 409
Query: 79 -----------------------IGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKE 115
+ + +MQ E + N+ TL S++ CA L L+ G+
Sbjct: 410 KKNVITWTAMLVGLSQNGYAEDALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRT 469
Query: 116 FHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIF-SKFSIKNEVSCNTIIVGYCENG 174
H + R+G+ + + + L+D+Y +CG + SA K+F ++F +K+ + CN++I+GY +G
Sbjct: 470 VHAHFIRHGYAFDAVITSALIDMYAKCGKIHSAEKLFNNEFHLKDVILCNSMIMGYGMHG 529
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEP 229
+ A ++ +M ++ ++ S+++ + L +E ++F + + P
Sbjct: 530 HGRYALGVYSRMIEERLKPNQTTFVSLLTACSHSGLVEEGKALFHSMERDHDVRP 584
>gi|359490408|ref|XP_002267761.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Vitis vinifera]
Length = 650
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 177/553 (32%), Positives = 286/553 (51%), Gaps = 68/553 (12%)
Query: 55 ETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGK 114
E P LV W+ +I G +Q+ + EAI M RM +G+ N TL + ACAR+ + G+
Sbjct: 77 ECPTLVVWNHMIRGLSQSDHPVEAIHMYTRMHHQGITGNNLTLIFLFKACARVSDIVSGR 136
Query: 115 EFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
+ H + + GF S FV N L+ +Y CG + G+
Sbjct: 137 KIHVHALKLGFESYLFVSNALIHMYAMCGQL-----------------------GF---- 169
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTF 234
A+++FD M + R ++SWN++I GY + Y E +F D + I+ + T
Sbjct: 170 ----AQKMFDGM----LDRDLVSWNTLICGYSQYNKYKEVLRLF-DAMTAANIKADAVTM 220
Query: 235 GSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE- 293
+++AC+ + + L+ D ++G L++MY R AQ FD +
Sbjct: 221 VKIILACSHLGDWEFADSMVKYIKENNLEIDVYLGNTLIDMYGRRSLAELAQGVFDRMRE 280
Query: 294 --------------NIENLLG--KMKEDGFEPNVYTWNAM--------------QLFSEM 323
+ NL K+ ++ + +V +W +M +LF EM
Sbjct: 281 RNIVSWNALVMGHAKVGNLTAARKLFDNMPKRDVISWTSMITGYSQASQFSDAVKLFQEM 340
Query: 324 LSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSL 383
++ + PD TV +LSAC+ L ++ G VH Y R G +D+++G +L+DMY KCG +
Sbjct: 341 MAAKVKPDKVTVASVLSACAHLGKLDVGWAVHHYIRRHGVQADIYVGNSLIDMYCKCGMV 400
Query: 384 KHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSAC 443
+ A + R+ D VS ++++ A++G + F ++L G +P H +F+ L AC
Sbjct: 401 EKALEVFHRMKDKDSVSWTSVISGLAVNGFANSALDLFSQMLREGVQPTHGTFVGILLAC 460
Query: 444 VHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVM 502
HAG + G E+F+ M + + + P++KHY C+VDLLSR+G + +AYEFIKK+P+ PD V+
Sbjct: 461 AHAGLVNKGLEYFESMESVHGLVPAMKHYGCVVDLLSRSGNIDKAYEFIKKMPIVPDVVV 520
Query: 503 WGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKD 562
W LL C HGN+ +IA RL+EL+P ++GNYV+L+N +A RW D + R+ M+D
Sbjct: 521 WRILLSACKLHGNVVLAEIATKRLLELDPCDSGNYVLLSNTYAGVDRWDDAMKMRELMED 580
Query: 563 RRMHKSPGCSWIE 575
+ K G S IE
Sbjct: 581 SDVQKPSGSSSIE 593
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 115/420 (27%), Positives = 196/420 (46%), Gaps = 55/420 (13%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY CG L A+K+F M +RD VSWN+
Sbjct: 160 MYAMCGQLGFAQKMFDGMLDRDLVSWNT-------------------------------- 187
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+I G++Q +E + + M A ++ +A T+ ++ AC+ L YI
Sbjct: 188 ----LICGYSQYNKYKEVLRLFDAMTAANIKADAVTMVKIILACSHLGDWEFADSMVKYI 243
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
N + ++ N L+D+Y R A +F + +N VS N +++G+ + GN+ AR
Sbjct: 244 KENNLEIDVYLGNTLIDMYGRRSLAELAQGVFDRMRERNIVSWNALVMGHAKVGNLTAAR 303
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+LFD M +R +ISW SMI+GY S + +A +F++ +M ++P T SVL A
Sbjct: 304 KLFDNMP----KRDVISWTSMITGYSQASQFSDAVKLFQE-MMAAKVKPDKVTVASVLSA 358
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA + L G +H G+Q+D +VG +L++MYC+ + A F +++ +++
Sbjct: 359 CAHLGKLDVGWAVHHYIRRHGVQADIYVGNSLIDMYCKCGMVEKALEVFHRMKDKDSVSW 418
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG-------KQ 353
G N + +A+ LFS+ML + P T IL AC+ + +G +
Sbjct: 419 TSVISGLAVNGFANSALDLFSQMLREGVQPTHGTFVGILLACAHAGLVNKGLEYFESMES 478
Query: 354 VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNAMLTAYAMHG 412
VH + H G +VD+ ++ G++ A K++ PD+V +L+A +HG
Sbjct: 479 VHGLV-----PAMKHYG-CVVDLLSRSGNIDKAYEFIKKMPIVPDVVVWRILLSACKLHG 532
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 118/499 (23%), Positives = 208/499 (41%), Gaps = 82/499 (16%)
Query: 92 PNAR--TLSSVLPACARLQKLSLG----KEFHGYITRNGFMSNPFVVNGLVDVYRRCGDM 145
PN R T SS+ P R+ K S+ KE H ++ R ++PF+++ ++ Y
Sbjct: 6 PNTRLFTSSSMAPKSGRVSKNSISTDTSKELHAHLIRTQLHTDPFLMSDVIRSYS----- 60
Query: 146 LSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGY 205
LS+ + + N++ C T++V WN MI G
Sbjct: 61 LSSTNLHKAHLVFNQIECPTLVV-----------------------------WNHMIRGL 91
Query: 206 VDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSD 265
+ EA M+ + GI + T + ACA ++ + G++IH A+ LG +S
Sbjct: 92 SQSDHPVEAIHMYTR-MHHQGITGNNLTLIFLFKACARVSDIVSGRKIHVHALKLGFESY 150
Query: 266 TFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLS 325
FV AL+ MY L AQ FD + + + + G+ ++LF M +
Sbjct: 151 LFVSNALIHMYAMCGQLGFAQKMFDGMLDRDLVSWNTLICGYSQYNKYKEVLRLFDAMTA 210
Query: 326 LDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMY-------- 377
++ D T+ I+ ACS L E + Y + DV++G L+DMY
Sbjct: 211 ANIKADAVTMVKIILACSHLGDWEFADSMVKYIKENNLEIDVYLGNTLIDMYGRRSLAEL 270
Query: 378 -----------------------AKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHG 414
AK G+L AR + + D++S +M+T Y+
Sbjct: 271 AQGVFDRMRERNIVSWNALVMGHAKVGNLTAARKLFDNMPKRDVISWTSMITGYSQASQF 330
Query: 415 KEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCM 474
+ + F+ ++A+ +PD ++ S LSAC H G + G + + V+ + +
Sbjct: 331 SDAVKLFQEMMAAKVKPDKVTVASVLSACAHLGKLDVGWAVHHYIRRHGVQADIYVGNSL 390
Query: 475 VDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIEL----- 529
+D+ + G + +A E ++ DSV W +++ G +G F A D ++
Sbjct: 391 IDMYCKCGMVEKALEVFHRMK-DKDSVSWTSVISGLAVNG---FANSALDLFSQMLREGV 446
Query: 530 EPNNTGNYVMLANLFAYAG 548
+P + G +V + A+AG
Sbjct: 447 QPTH-GTFVGILLACAHAG 464
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 151/321 (47%), Gaps = 15/321 (4%)
Query: 246 SLRKGKEIHALAIALGLQSDTFVGGALVEMYC-RYQDLVAAQMAFDEIENIENLLGKMKE 304
S KE+HA I L +D F+ ++ Y +L A + F++IE ++
Sbjct: 29 STDTSKELHAHLIRTQLHTDPFLMSDVIRSYSLSSTNLHKAHLVFNQIECPTLVVWNHMI 88
Query: 305 DGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYD 364
G + + A+ +++ M +T + T+ + AC+ ++ + G+++H +A++ G++
Sbjct: 89 RGLSQSDHPVEAIHMYTRMHHQGITGNNLTLIFLFKACARVSDIVSGRKIHVHALKLGFE 148
Query: 365 SDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRI 424
S + + AL+ MYA CG L A+ + + DLVS N ++ Y+ + KE + F +
Sbjct: 149 SYLFVSNALIHMYAMCGQLGFAQKMFDGMLDRDLVSWNTLICGYSQYNKYKEVLRLFDAM 208
Query: 425 LASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYY----DVKPSLKHYTCMVDLLSR 480
A+ + D ++ + + AC H G EF D M Y +++ + ++D+ R
Sbjct: 209 TAANIKADAVTMVKIILACSHLGDW----EFADSMVKYIKENNLEIDVYLGNTLIDMYGR 264
Query: 481 AGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPN-NTGNYVM 539
L E + + + V W AL+ G GNL AA +L + P + ++
Sbjct: 265 RS-LAELAQGVFDRMRERNIVSWNALVMGHAKVGNLT----AARKLFDNMPKRDVISWTS 319
Query: 540 LANLFAYAGRWSDLARTRQKM 560
+ ++ A ++SD + Q+M
Sbjct: 320 MITGYSQASQFSDAVKLFQEM 340
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 76/181 (41%), Gaps = 38/181 (20%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG ++ A +VF M ++D VSW SV++ A NG AL+
Sbjct: 393 MYCKCGMVEKALEVFHRMKDKDSVSWTSVISGLAVNGFANSALDL--------------- 437
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKE-FHGY 119
F+Q M EG++P T +L ACA ++ G E F
Sbjct: 438 --------FSQ-------------MLREGVQPTHGTFVGILLACAHAGLVNKGLEYFESM 476
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCE-NGNVAE 178
+ +G + +VD+ R G++ A + K I +V I++ C+ +GNV
Sbjct: 477 ESVHGLVPAMKHYGCVVDLLSRSGNIDKAYEFIKKMPIVPDVVVWRILLSACKLHGNVVL 536
Query: 179 A 179
A
Sbjct: 537 A 537
>gi|125605235|gb|EAZ44271.1| hypothetical protein OsJ_28890 [Oryza sativa Japonica Group]
Length = 630
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 185/585 (31%), Positives = 301/585 (51%), Gaps = 58/585 (9%)
Query: 18 MPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEE 77
MP RD V++N ++++ A +GLV A + D VSW+ ++ + +NG EE
Sbjct: 1 MPVRDSVTYNVMISSHANHGLVSLARHYFDLAPEKD-----AVSWNGMLAAYVRNGRVEE 55
Query: 78 AIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVD 137
A G LF + E + + ++++ + K+S +E + +S +V+G
Sbjct: 56 ARG-LFNSRTEW---DVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSG--- 108
Query: 138 VYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIIS 197
Y R GDM+ A ++F +++ + ++ GY +NG + EAR +FD M +R +S
Sbjct: 109 -YARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMP----ERNAVS 163
Query: 198 WNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALA 257
WN+M++ Y+ + DEA +F + R+ ++ ++L A L + K +
Sbjct: 164 WNAMVAAYIQRRMMDEAKELFNMMPCRN-----VASWNTMLTGYAQAGMLEEAKAVFDTM 218
Query: 258 IALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAM 317
Q D A++ Y + G E+ +
Sbjct: 219 P----QKDAVSWAAMLAAYSQ---------------------GGCSEE----------TL 243
Query: 318 QLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMY 377
QLF EM + +LS C+ +A +E G Q+H IR GY +G AL+ MY
Sbjct: 244 QLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMY 303
Query: 378 AKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFL 437
KCG+++ AR A++ + D+VS N M+ YA HG GKE + F + + +PD I+ +
Sbjct: 304 FKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLV 363
Query: 438 SALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPM 496
L+AC H+G ++ G +F M + + V +HYTCM+DLL RAG L EA++ +K +P
Sbjct: 364 GVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPF 423
Query: 497 APDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLART 556
PDS MWGALLG H N E G+ AA+++ ELEP N G YV+L+N++A +G+W D +
Sbjct: 424 EPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKM 483
Query: 557 RQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
R M++R + K PG SWIE ++++H F A D H E+IY ++
Sbjct: 484 RVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLE 528
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 109/426 (25%), Positives = 187/426 (43%), Gaps = 51/426 (11%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y + G + +A+++F MP RD VSWN +V+ A G ++EA + D + +
Sbjct: 78 YVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRD-----VFT 132
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W+AV+ G+ QNG EE AR + +P
Sbjct: 133 WTAVVSGYAQNGMLEE----------------ARRVFDAMPE------------------ 158
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
N N +V Y + M A ++F+ +N S NT++ GY + G + EA+
Sbjct: 159 -----RNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKA 213
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
+FD M Q+ +SW +M++ Y +E +F + + R G F VL C
Sbjct: 214 VFDTMP----QKDAVSWAAMLAAYSQGGCSEETLQLFIE-MGRCGEWVNRSAFACVLSTC 268
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK 301
AD+ +L G ++H I G FVG AL+ MY + ++ A+ AF+E+E + +
Sbjct: 269 ADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWN 328
Query: 302 MKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG-KQVHAYAIR 360
G+ + + A+++F M + PD T+ +L+ACS +E+G ++
Sbjct: 329 TMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHD 388
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVSQNAMLTAYAMHGHGKEGIA 419
G + T ++D+ + G L A K + PD A+L A +H + + G +
Sbjct: 389 FGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRS 448
Query: 420 HFRRIL 425
+I
Sbjct: 449 AAEKIF 454
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 97/200 (48%), Gaps = 14/200 (7%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG+++DA+ F+ M ERD VSWN+++ A +G EALE + M + + P+ +
Sbjct: 302 MYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTK-PDDI 360
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
+ V+ + +G E+ I + M + G+ + ++ R +L+ E H
Sbjct: 361 TLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLA---EAHDL 417
Query: 120 ITRNGFMSNPFVVNGLVDVYR--RCGDM--LSALKIFSKFSIKNEVSCNTIIVG--YCEN 173
+ F + + L+ R R ++ +A KI F ++ E + +++ Y +
Sbjct: 418 MKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKI---FELEPENAGMYVLLSNIYASS 474
Query: 174 GNVAEARELFDQMEHLGVQR 193
G +AR++ ME GV++
Sbjct: 475 GKWRDARKMRVMMEERGVKK 494
>gi|449523810|ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g01510-like [Cucumis
sativus]
Length = 816
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 194/664 (29%), Positives = 332/664 (50%), Gaps = 74/664 (11%)
Query: 6 GSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAV 65
G L A +VF MP ++ +S N +++ G + +A E + M VSW+ +
Sbjct: 57 GDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMVE-----RTAVSWTIL 111
Query: 66 IGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGF 125
IGG+ Q+ +EA + M+ G+EP+ TL ++L L+ ++ + H ++ + G+
Sbjct: 112 IGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGY 171
Query: 126 MSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQ 185
N V N LVD Y + + A ++F K+ V+ N+++ GY G EA ELF +
Sbjct: 172 EYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLE 231
Query: 186 MEHLGVQRGIISWNSMISG--------------------------YVDNSL--------- 210
+ + G++ ++ +++S +V N+L
Sbjct: 232 LHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQ 291
Query: 211 YDEAFSMFRDLLMRDGI------------------------------EPTSFTFGSVL-I 239
DE +F ++ DGI + F F ++L I
Sbjct: 292 VDEVGKLFXEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSI 351
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
A + +N LR G++IH AI +G ++ V ALV+MY + AQ FD I +
Sbjct: 352 ATSSLN-LRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVP 410
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
+ + +FS+M + D T IL AC++LA++ G+Q+H+ I
Sbjct: 411 WTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSLLI 470
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
R G+ S+V+ G+AL+D YAKCG + A ++ + + VS NA+++AYA +G+ +
Sbjct: 471 RSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLN 530
Query: 420 HFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLL 478
F++++ SG++PD +SFLS LSAC H G ++ F+ M Y+V P +HYT MVD+L
Sbjct: 531 SFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEVTPKREHYTSMVDVL 590
Query: 479 SRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEP-NNTGNY 537
R G EA + + ++P P +MW ++L C H N E + AADRL +E + Y
Sbjct: 591 CRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELAKKAADRLFNMEDLRDAAPY 650
Query: 538 VMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
+ ++N++A AG+W ++A+ ++ M+DR + K P SW+E + + H F A+D+SH ++I
Sbjct: 651 INMSNIYAVAGQWDNVAKVKKAMRDRGVRKVPAYSWVEIKHQTHVFSANDKSHPEMKKIL 710
Query: 598 TIID 601
I+
Sbjct: 711 RKIN 714
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/402 (26%), Positives = 189/402 (47%), Gaps = 6/402 (1%)
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
+I + GF N N V+ + GD++ A ++F + KN +S N +I G+ + G ++
Sbjct: 32 AHIVKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLS 91
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
+ARELFD M V+R +SW +I GY+ ++ EAF ++ D+ R GIEP T ++
Sbjct: 92 KARELFDGM----VERTAVSWTILIGGYLQSNQSKEAFRLYADM-RRGGIEPDYVTLVTL 146
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
L ++ + +IH I LG + + V +LV+ YC+ L A F + N +
Sbjct: 147 LSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDT 206
Query: 298 LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAY 357
+ G+ A++LF E+ + + P +T +LSA L + G+QVH +
Sbjct: 207 VTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGF 266
Query: 358 AIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEG 417
++ + +V +G AL+D Y+K + + + D +S N ++T+YA +G KE
Sbjct: 267 VLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITSYAWNGQFKES 326
Query: 418 IAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDL 477
FR++ + F F + LS + +++ G + + +VD+
Sbjct: 327 FDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDM 386
Query: 478 LSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFG 519
++ EA + I +V W A++ V G E G
Sbjct: 387 YAKCNGDKEAQKIFDNIA-CKSTVPWTAMISAYVQKGKHEEG 427
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 128/311 (41%), Gaps = 45/311 (14%)
Query: 216 SMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEM 275
++F++L++R+ P SL I A + G +T V
Sbjct: 7 TLFQNLVLRNSPAPKP--------------SLNSNHLIDAHIVKTGFNPNTCRSNFQVNN 52
Query: 276 YCRYQDLVAAQMAFDEI--ENIENL------------LGKMKE--DGF-EPNVYTWN--- 315
+ DLV A FD++ +N +L L K +E DG E +W
Sbjct: 53 FLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILI 112
Query: 316 -----------AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYD 364
A +L+++M + PD T+ +LS L T Q+H + I+ GY+
Sbjct: 113 GGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYE 172
Query: 365 SDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRI 424
++ + +LVD Y K L A +K + D V+ N+++T Y+ G +E I F +
Sbjct: 173 YNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLEL 232
Query: 425 LASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGEL 484
SG +P +F + LSA V K G + + + ++ ++D S+ ++
Sbjct: 233 HNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQV 292
Query: 485 GEAYEFIKKIP 495
E + ++P
Sbjct: 293 DEVGKLFXEMP 303
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 55/106 (51%), Gaps = 2/106 (1%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y KCG + DA K F MPER+ VSWN++++A A NG V L ++M P+ VS
Sbjct: 488 YAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQ-SGYKPDSVS 546
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRM-QAEGLEPNARTLSSVLPACAR 106
+ +V+ + G+ EEA+ M Q + P +S++ R
Sbjct: 547 FLSVLSACSHCGFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCR 592
>gi|225423995|ref|XP_002279343.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 623
Score = 308 bits (788), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 184/589 (31%), Positives = 297/589 (50%), Gaps = 79/589 (13%)
Query: 28 SVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQA 87
+VT CA + A + +++ PN+ W+++ G+ Q+ E + + F+M+
Sbjct: 75 KLVTICATLKRMTYARQLFDQIPD-----PNIALWNSMFRGYAQSESYREVVFLFFQMKG 129
Query: 88 EGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLS 147
+ PN T VL +C ++ L G++ H ++ + GF NPFV L+D+Y
Sbjct: 130 MDIRPNCFTFPVVLKSCGKINALIEGEQVHCFLIKCGFRGNPFVGTTLIDMYS------- 182
Query: 148 ALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVD 207
G V +A ++F +M +R +++W SMI+GY+
Sbjct: 183 ------------------------AGGTVGDAYKIFCEM----FERNVVAWTSMINGYIL 214
Query: 208 NSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTF 267
++ A +F RD + G I DM RK H + D
Sbjct: 215 SADLVSARRLFDLAPERDVVLWNIMVSG--YIEGGDMVEARK--LFHEMP-----NRDVM 265
Query: 268 VGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAM-------QLF 320
+++ Y ++ A + F+E+ E N+++WNA+ LF
Sbjct: 266 FWNTVLKGYATNGNVEALEGLFEEMP--------------ERNIFSWNALIGGYAHNGLF 311
Query: 321 SEML--------SLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTA 372
E+L D+ P+ T+ +LSAC+ L ++ GK VH YA G +V++G A
Sbjct: 312 FEVLGSFKRMLSESDVPPNDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNA 371
Query: 373 LVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPD 432
L+DMYAKCG +++A ++ + T DL+S N ++ AMH G + + F ++ +G +PD
Sbjct: 372 LMDMYAKCGIIENAISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPD 431
Query: 433 HISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFI 491
I+F+ L AC H G ++ G +F MA Y + P ++HY CMVD+L+RAG L +A F+
Sbjct: 432 GITFIGILCACTHMGLVEDGFAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAMAFV 491
Query: 492 KKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWS 551
+K+P+ D V+W LLG C + N+E ++A RLIELEP N NYVML+N++ AGRW
Sbjct: 492 RKMPVEADGVIWAGLLGACRIYKNVELAELALQRLIELEPKNPANYVMLSNIYGDAGRWE 551
Query: 552 DLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTII 600
D+AR + M+D K PGCS IE D + +F + D H + EEIY ++
Sbjct: 552 DVARLKVAMRDTGFKKLPGCSLIEVNDAVVEFYSLDERHPQIEEIYGVL 600
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 96/300 (32%), Positives = 156/300 (52%), Gaps = 17/300 (5%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETP--NL 59
Y + G + +A+K+F MP RD + WN+V+ A NG V EALE L E P N+
Sbjct: 243 YIEGGDMVEARKLFHEMPNRDVMFWNTVLKGYATNGNV-EALE------GLFEEMPERNI 295
Query: 60 VSWSAVIGGFTQNGYDEEAIGMLFRMQAEG-LEPNARTLSSVLPACARLQKLSLGKEFHG 118
SW+A+IGG+ NG E +G RM +E + PN TL +VL ACARL L LGK H
Sbjct: 296 FSWNALIGGYAHNGLFFEVLGSFKRMLSESDVPPNDATLVTVLSACARLGALDLGKWVHV 355
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
Y +G N +V N L+D+Y +CG + +A+ +F K+ +S NT+I G + A+
Sbjct: 356 YAESSGLKGNVYVGNALMDMYAKCGIIENAISVFRGMDTKDLISWNTLIGGLAMHSRGAD 415
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
A LF QM++ G + I++ ++ L ++ F+ F+ + I P +G ++
Sbjct: 416 ALNLFFQMKNAGQKPDGITFIGILCACTHMGLVEDGFAYFQSMADDYLIMPQIEHYGCMV 475
Query: 239 IACADMNSLRKGKEIHALAIA--LGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
A R G+ A+A + +++D + L+ Y+++ A++A + +E
Sbjct: 476 DMLA-----RAGRLEQAMAFVRKMPVEADGVIWAGLLGACRIYKNVELAELALQRLIELE 530
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 88/193 (45%), Gaps = 5/193 (2%)
Query: 339 LSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDL 398
+S S T ++ Q+ A I G+ + +I LV + A + +AR + +I P++
Sbjct: 42 ISLLQSCKTSKQVHQIQAQIIANGFQYNEYITPKLVTICATLKRMTYARQLFDQIPDPNI 101
Query: 399 VSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDL 458
N+M YA +E + F ++ RP+ +F L +C ++ G +
Sbjct: 102 ALWNSMFRGYAQSESYREVVFLFFQMKGMDIRPNCFTFPVVLKSCGKINALIEGEQVHCF 161
Query: 459 MAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEF 518
+ + + T ++D+ S G +G+AY+ ++ + V W +++ G + +L
Sbjct: 162 LIKCGFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEM-FERNVVAWTSMINGYILSADL-- 218
Query: 519 GQIAADRLIELEP 531
++A RL +L P
Sbjct: 219 --VSARRLFDLAP 229
Score = 45.4 bits (106), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 38/183 (20%), Positives = 70/183 (38%), Gaps = 37/183 (20%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG +++A VF+ M +D +SWN+
Sbjct: 375 MYAKCGIIENAISVFRGMDTKDLISWNT-------------------------------- 402
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+IGG + +A+ + F+M+ G +P+ T +L AC + + G + +
Sbjct: 403 ----LIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIGILCACTHMGLVEDGFAYFQSM 458
Query: 121 TRNGFMSNPFVVNG-LVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ + G +VD+ R G + A+ K ++ + ++G C E
Sbjct: 459 ADDYLIMPQIEHYGCMVDMLARAGRLEQAMAFVRKMPVEADGVIWAGLLGACRIYKNVEL 518
Query: 180 REL 182
EL
Sbjct: 519 AEL 521
>gi|449461943|ref|XP_004148701.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Cucumis sativus]
gi|449517215|ref|XP_004165641.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Cucumis sativus]
Length = 706
Score = 308 bits (788), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 175/516 (33%), Positives = 274/516 (53%), Gaps = 39/516 (7%)
Query: 88 EGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLS 147
+G T +++ AC L+ + K Y+ NGF + ++ N ++ ++ +CG M+
Sbjct: 126 DGFHVGYSTYDALINACIGLKSIRGVKRLCNYMVDNGFEPDQYMRNRVLLMHVKCGMMID 185
Query: 148 ALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVD 207
A + LFD+M R +SW ++ISGYVD
Sbjct: 186 ACR-------------------------------LFDEMP----ARNAVSWGTIISGYVD 210
Query: 208 NSLYDEAFSMFRDLLMRDGI-EPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDT 266
+ Y EAF +F +LMR+ + TF +++ A A + + G+++H+ AI GL D
Sbjct: 211 SGNYVEAFRLF--ILMREEFYDCGPRTFATMIRASAGLEIIFPGRQLHSCAIKAGLGQDI 268
Query: 267 FVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSL 326
FV AL++MY + L A FDE+ + + G+ + Y+ A+ L+ EM
Sbjct: 269 FVSCALIDMYSKCGSLEDAHCVFDEMPDKTIVGWNSIIAGYALHGYSEEALDLYHEMRDS 328
Query: 327 DLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHA 386
+ D +T II+ CS LA++ R KQVHA +R G+ DV TALVD Y+K G + A
Sbjct: 329 GVKMDHFTFSIIIRICSRLASVARAKQVHASLVRNGFGLDVVANTALVDFYSKWGKVDDA 388
Query: 387 RLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHA 446
R + R+S +++S NA++ Y HGHG+E I F ++L G P+H++FL+ LSAC +
Sbjct: 389 RHVFDRMSCRNIISWNALIAGYGNHGHGEEAIDMFEKMLREGMMPNHVTFLAVLSACSIS 448
Query: 447 GSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGA 505
G + G E F M + VKP H+ CM++LL R G L EAY I+K P P + MW A
Sbjct: 449 GLFERGWEIFQSMTRDHKVKPRAMHFACMIELLGREGLLDEAYALIRKAPFQPTANMWAA 508
Query: 506 LLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRM 565
LL C HGNLE G+ AA++L +EP NY++L N++ +G+ + A Q +K + +
Sbjct: 509 LLRACRVHGNLELGKFAAEKLYGMEPEKLSNYIVLLNIYNSSGKLKEAADVFQTLKRKGL 568
Query: 566 HKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
P CSWIE ++ H F + D+ H + E++ +D
Sbjct: 569 RMLPACSWIEVNNQPHAFLSGDKHHVQIEKVVGKVD 604
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 109/497 (21%), Positives = 197/497 (39%), Gaps = 112/497 (22%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
M+ KCG + DA ++F MP R N V
Sbjct: 176 MHVKCGMMIDACRLFDEMPAR------------------------------------NAV 199
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW +I G+ +G EA + M+ E + RT ++++ A A L+ + G++ H
Sbjct: 200 SWGTIISGYVDSGNYVEAFRLFILMREEFYDCGPRTFATMIRASAGLEIIFPGRQLHSCA 259
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G + FV L+D+Y +CG + A +F + K V N+II GY +G EA
Sbjct: 260 IKAGLGQDIFVSCALIDMYSKCGSLEDAHCVFDEMPDKTIVGWNSIIAGYALHGYSEEAL 319
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+L+ +M RD G++ FTF ++
Sbjct: 320 DLYHEM--------------------------------RD----SGVKMDHFTFSIIIRI 343
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C+ + S+ + K++HA + G D ALV+ Y ++ + A+ FD + +
Sbjct: 344 CSRLASVARAKQVHASLVRNGFGLDVVANTALVDFYSKWGKVDDARHVFDRMSCRNIISW 403
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G+ + + A+ +F +ML + P+ T +LSACS ERG ++
Sbjct: 404 NALIAGYGNHGHGEEAIDMFEKMLREGMMPNHVTFLAVLSACSISGLFERGWEI------ 457
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
++ ++ V AM A + G+EG+
Sbjct: 458 -----------------------------FQSMTRDHKVKPRAMHFACMIELLGREGLLD 488
Query: 421 --FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKP-SLKHYTCMVDL 477
+ I + F+P + + L AC G+++ G F Y ++P L +Y ++++
Sbjct: 489 EAYALIRKAPFQPTANMWAALLRACRVHGNLELGK--FAAEKLYGMEPEKLSNYIVLLNI 546
Query: 478 LSRAGELGEAYEFIKKI 494
+ +G+L EA + + +
Sbjct: 547 YNSSGKLKEAADVFQTL 563
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 86/383 (22%), Positives = 166/383 (43%), Gaps = 8/383 (2%)
Query: 191 VQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKG 250
V++ + S I V Y +A MF + DG T+ +++ AC + S+R
Sbjct: 92 VKKSSVGICSQIEKLVLCKKYRDALEMFEIFELEDGFHVGYSTYDALINACIGLKSIRGV 151
Query: 251 KEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPN 310
K + + G + D ++ ++ M+ + ++ A FDE+ + G+ +
Sbjct: 152 KRLCNYMVDNGFEPDQYMRNRVLLMHVKCGMMIDACRLFDEMPARNAVSWGTIISGYVDS 211
Query: 311 VYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIG 370
A +LF M T ++ A + L + G+Q+H+ AI+ G D+ +
Sbjct: 212 GNYVEAFRLFILMREEFYDCGPRTFATMIRASAGLEIIFPGRQLHSCAIKAGLGQDIFVS 271
Query: 371 TALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFR 430
AL+DMY+KCGSL+ A + + +V N+++ YA+HG+ +E + + + SG +
Sbjct: 272 CALIDMYSKCGSLEDAHCVFDEMPDKTIVGWNSIIAGYALHGYSEEALDLYHEMRDSGVK 331
Query: 431 PDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEF 490
DH +F + C S+ + + + T +VD S+ G++ +A
Sbjct: 332 MDHFTFSIIIRICSRLASVARAKQVHASLVRNGFGLDVVANTALVDFYSKWGKVDDARHV 391
Query: 491 IKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIE--LEPNNTGNYVML-----ANL 543
++ + + W AL+ G +HG+ E ++++ + PN+ +L + L
Sbjct: 392 FDRMS-CRNIISWNALIAGYGNHGHGEEAIDMFEKMLREGMMPNHVTFLAVLSACSISGL 450
Query: 544 FAYAGRWSDLARTRQKMKDRRMH 566
F K+K R MH
Sbjct: 451 FERGWEIFQSMTRDHKVKPRAMH 473
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 90/195 (46%), Gaps = 8/195 (4%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y K G +DDA+ VF M R+ +SWN+++ +G EA++ E+M + PN V+
Sbjct: 379 YSKWGKVDDARHVFDRMSCRNIISWNALIAGYGNHGHGEEAIDMFEKMLR-EGMMPNHVT 437
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+ AV+ + +G E + M + ++P A + ++ L + L E + I
Sbjct: 438 FLAVLSACSISGLFERGWEIFQSMTRDHKVKPRAMHFACMIEL---LGREGLLDEAYALI 494
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDM-LSALKIFSKFSIKNEVSCNTIIV--GYCENGNVA 177
+ F + L+ R G++ L + ++ E N I++ Y +G +
Sbjct: 495 RKAPFQPTANMWAALLRACRVHGNLELGKFAAEKLYGMEPEKLSNYIVLLNIYNSSGKLK 554
Query: 178 EARELFDQMEHLGVQ 192
EA ++F ++ G++
Sbjct: 555 EAADVFQTLKRKGLR 569
>gi|449460574|ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Cucumis sativus]
Length = 816
Score = 308 bits (788), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 194/664 (29%), Positives = 332/664 (50%), Gaps = 74/664 (11%)
Query: 6 GSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAV 65
G L A +VF MP ++ +S N +++ G + +A E + M VSW+ +
Sbjct: 57 GDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMVE-----RTAVSWTIL 111
Query: 66 IGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGF 125
IGG+ Q+ +EA + M+ G+EP+ TL ++L L+ ++ + H ++ + G+
Sbjct: 112 IGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGY 171
Query: 126 MSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQ 185
N V N LVD Y + + A ++F K+ V+ N+++ GY G EA ELF +
Sbjct: 172 EYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLE 231
Query: 186 MEHLGVQRGIISWNSMISG--------------------------YVDNSL--------- 210
+ + G++ ++ +++S +V N+L
Sbjct: 232 LHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQ 291
Query: 211 YDEAFSMFRDLLMRDGI------------------------------EPTSFTFGSVL-I 239
DE +F ++ DGI + F F ++L I
Sbjct: 292 VDEVGKLFYEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSI 351
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
A + +N LR G++IH AI +G ++ V ALV+MY + AQ FD I +
Sbjct: 352 ATSSLN-LRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVP 410
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
+ + +FS+M + D T IL AC++LA++ G+Q+H+ I
Sbjct: 411 WTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSLLI 470
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
R G+ S+V+ G+AL+D YAKCG + A ++ + + VS NA+++AYA +G+ +
Sbjct: 471 RSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLN 530
Query: 420 HFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLL 478
F++++ SG++PD +SFLS LSAC H G ++ F+ M Y+V P +HYT MVD+L
Sbjct: 531 SFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEVTPKREHYTSMVDVL 590
Query: 479 SRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEP-NNTGNY 537
R G EA + + ++P P +MW ++L C H N E + AADRL +E + Y
Sbjct: 591 CRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELAKKAADRLFNMEDLRDAAPY 650
Query: 538 VMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
+ ++N++A AG+W ++A+ ++ M+DR + K P SW+E + + H F A+D+SH ++I
Sbjct: 651 INMSNIYAVAGQWDNVAKVKKAMRDRGVRKVPAYSWVEIKHQTHVFSANDKSHPEMKKIL 710
Query: 598 TIID 601
I+
Sbjct: 711 RKIN 714
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 106/402 (26%), Positives = 189/402 (47%), Gaps = 6/402 (1%)
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
+I + GF N N V+ + GD++ A ++F + KN +S N +I G+ + G ++
Sbjct: 32 AHIVKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLS 91
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
+ARELFD M V+R +SW +I GY+ ++ EAF ++ D+ R GIEP T ++
Sbjct: 92 KARELFDGM----VERTAVSWTILIGGYLQSNQSKEAFRLYADM-RRGGIEPDYVTLVTL 146
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
L ++ + +IH I LG + + V +LV+ YC+ L A F + N +
Sbjct: 147 LSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDT 206
Query: 298 LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAY 357
+ G+ A++LF E+ + + P +T +LSA L + G+QVH +
Sbjct: 207 VTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGF 266
Query: 358 AIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEG 417
++ + +V +G AL+D Y+K + + + D +S N ++T+YA +G KE
Sbjct: 267 VLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITSYAWNGQFKES 326
Query: 418 IAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDL 477
FR++ + F F + LS + +++ G + + +VD+
Sbjct: 327 FDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDM 386
Query: 478 LSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFG 519
++ EA + I +V W A++ V G E G
Sbjct: 387 YAKCNGDKEAQKIFDNIA-CKSTVPWTAMISAYVQKGKHEEG 427
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 128/311 (41%), Gaps = 45/311 (14%)
Query: 216 SMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEM 275
++F++L++R+ P SL I A + G +T V
Sbjct: 7 TLFQNLVLRNSPAPKP--------------SLNSNHLIDAHIVKTGFNPNTCRSNFQVNN 52
Query: 276 YCRYQDLVAAQMAFDEI--ENIENL------------LGKMKE--DGF-EPNVYTWN--- 315
+ DLV A FD++ +N +L L K +E DG E +W
Sbjct: 53 FLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILI 112
Query: 316 -----------AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYD 364
A +L+++M + PD T+ +LS L T Q+H + I+ GY+
Sbjct: 113 GGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYE 172
Query: 365 SDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRI 424
++ + +LVD Y K L A +K + D V+ N+++T Y+ G +E I F +
Sbjct: 173 YNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLEL 232
Query: 425 LASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGEL 484
SG +P +F + LSA V K G + + + ++ ++D S+ ++
Sbjct: 233 HNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQV 292
Query: 485 GEAYEFIKKIP 495
E + ++P
Sbjct: 293 DEVGKLFYEMP 303
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 55/106 (51%), Gaps = 2/106 (1%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y KCG + DA K F MPER+ VSWN++++A A NG V L ++M P+ VS
Sbjct: 488 YAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQ-SGYKPDSVS 546
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRM-QAEGLEPNARTLSSVLPACAR 106
+ +V+ + G+ EEA+ M Q + P +S++ R
Sbjct: 547 FLSVLSACSHCGFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCR 592
>gi|347954456|gb|AEP33728.1| chlororespiratory reduction 21, partial [Brassica oleracea]
Length = 643
Score = 308 bits (788), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 203/673 (30%), Positives = 325/673 (48%), Gaps = 150/673 (22%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKCG LDDA+KVF +PER N+V
Sbjct: 28 MYGKCGVLDDARKVFDEIPER------------------------------------NVV 51
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+A++ G+ QNG +EEAI ++ M+ EG+EP T+S+ L A A + + GK H
Sbjct: 52 AWNALMVGYVQNGMNEEAIRLMCDMREEGVEPTRVTVSTCLSASANMGGVEEGKXSHALA 111
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
VVNGL + N + +I+ YC+ G + A
Sbjct: 112 ----------VVNGL--------------------ELDN-ILGTSILNFYCKVGLIDYAE 140
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMR-DGIEPTSFTFGSVLI 239
+FD+M + + +++WN +ISGYV L ++A M + LMR + ++ T +++
Sbjct: 141 MVFDRM----IGKDVVTWNLLISGYVQQGLVEDAIRMCQ--LMRLEKLKFDCVTLSTLMS 194
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE--- 296
A + + GKE+ I +SD + A V+MY + +V A+ FD +
Sbjct: 195 TAARTQNSKLGKEVQCYCIRHSFESDIVLASAAVDMYAKCGSIVDAKKVFDSTVQKDLIL 254
Query: 297 ------------------NLLGKMKEDGFEPNVYTWN--------------AMQLFSEML 324
L +M+ + PNV TWN A ++F +M
Sbjct: 255 WNTLLAAYAESGLSGEALRLFYEMQLESVPPNVITWNLIILSLLRNGQVDEAKEMFLQMQ 314
Query: 325 SLDLTP-----------------------------------DIYTVGIILSACSSLATME 349
S + P +++++ + LSAC++LA++
Sbjct: 315 SSGIVPTIVSWTTMMNGLVXNGCSEEAIHYLRKMQESGMRPNVFSITVALSACANLASLH 374
Query: 350 RGKQVHAYAIRCG-YDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAY 408
G+ VH Y IR + S V I T+LVDMYAKCG + A ++R +L NAM++AY
Sbjct: 375 FGRSVHGYIIRNRLHSSSVSIETSLVDMYAKCGDISKAEKVFRRKLFSELPLYNAMISAY 434
Query: 409 AMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFF-DLMAYYDVKPS 467
A++G+ +E +A + + G +PD+I+F + LSAC HAG I E F D+++ + VKP
Sbjct: 435 ALYGNVEEAMALYGSLEDMGIKPDNITFTNILSACNHAGDINQAIEIFSDMVSKHGVKPC 494
Query: 468 LKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLI 527
L+HY MVDLL+ AGE +A ++++P PD+ M +LL C E + + +L+
Sbjct: 495 LEHYGLMVDLLASAGETEKALRLMEEMPYEPDARMIQSLLATCNKEHKTELVEYLSKQLL 554
Query: 528 ELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDR----DEIHKF 583
E EP+N+GNYV ++N +A G W ++ + R+ MK + + K PGCSWI + + + F
Sbjct: 555 ESEPDNSGNYVTISNAYAGEGSWDEVVKMREMMKAKGLKKQPGCSWIRVKREEEEXVQVF 614
Query: 584 RASDRSHDRSEEI 596
A+D++H R+ EI
Sbjct: 615 VANDKTHLRNNEI 627
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 116/463 (25%), Positives = 207/463 (44%), Gaps = 44/463 (9%)
Query: 112 LGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYC 171
G+ HGY+ ++G FV + L D+Y +CG + A K+F + +N V+ N ++VGY
Sbjct: 2 FGRGVHGYVAKSGLDDCVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGYV 61
Query: 172 ENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTS 231
+NG EA L M +G+EPT
Sbjct: 62 QNGMNEEAIRLMCDMRE------------------------------------EGVEPTR 85
Query: 232 FTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDE 291
T + L A A+M + +GK HALA+ GL+ D +G +++ YC+ + A+M FD
Sbjct: 86 VTVSTCLSASANMGGVEEGKXSHALAVVNGLELDNILGTSILNFYCKVGLIDYAEMVFDR 145
Query: 292 IENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG 351
+ + + + G+ +A+++ M L D T+ ++S + + G
Sbjct: 146 MIGKDVVTWNLLISGYVQQGLVEDAIRMCQLMRLEKLKFDCVTLSTLMSTAARTQNSKLG 205
Query: 352 KQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMH 411
K+V Y IR ++SD+ + +A VDMYAKCGS+ A+ + DL+ N +L AYA
Sbjct: 206 KEVQCYCIRHSFESDIVLASAAVDMYAKCGSIVDAKKVFDSTVQKDLILWNTLLAAYAES 265
Query: 412 GHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHY 471
G E + F + P+ I++ + + + G + E F M + P++ +
Sbjct: 266 GLSGEALRLFYEMQLESVPPNVITWNLIILSLLRNGQVDEAKEMFLQMQSSGIVPTIVSW 325
Query: 472 TCMVDLLSRAGELGEAYEFIKKIP---MAPDSVMWGALLGGCVSHGNLEFGQIAADRLI- 527
T M++ L G EA +++K+ M P+ L C + +L FG+ +I
Sbjct: 326 TTMMNGLVXNGCSEEAIHYLRKMQESGMRPNVFSITVALSACANLASLHFGRSVHGYIIR 385
Query: 528 -ELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSP 569
L ++ L +++A G D+++ + + + + P
Sbjct: 386 NRLHSSSVSIETSLVDMYAKCG---DISKAEKVFRRKLFSELP 425
>gi|356546093|ref|XP_003541466.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Glycine max]
Length = 775
Score = 308 bits (788), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 180/579 (31%), Positives = 303/579 (52%), Gaps = 44/579 (7%)
Query: 21 RDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIG 80
D + +S++ GLV EA + + M N VSW+ +I G+ +EA
Sbjct: 149 HDVFAASSLLNMYCKTGLVFEARDLFDEMPE-----RNAVSWATMISGYASQELADEAFE 203
Query: 81 M--LFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDV 138
+ L R + +G N +SVL A ++ G++ H +NG + V N LV +
Sbjct: 204 LFKLMRHEEKGKNENEFVFTSVLSALTCYMLVNTGRQVHSLAMKNGLVCIVSVANALVTM 263
Query: 139 YRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISW 198
Y +CG + ALK F E+S N + I+W
Sbjct: 264 YVKCGSLEDALKTF-------ELSGN----------------------------KNSITW 288
Query: 199 NSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAI 258
++M++G+ D+A +F D+ + G P+ FT V+ AC+D ++ +G+++H ++
Sbjct: 289 SAMVTGFAQFGDSDKALKLFYDM-HQSGELPSEFTLVGVINACSDACAIVEGRQMHGYSL 347
Query: 259 ALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQ 318
LG + +V ALV+MY + +V A+ F+ I+ + +L G+ N A+
Sbjct: 348 KLGYELQLYVLSALVDMYAKCGSIVDARKGFECIQQPDVVLWTSIITGYVQNGDYEGALN 407
Query: 319 LFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYA 378
L+ +M + P+ T+ +L ACS+LA +++GKQ+HA I+ + ++ IG+AL MYA
Sbjct: 408 LYGKMQLGGVIPNDLTMASVLKACSNLAALDQGKQMHAGIIKYNFSLEIPIGSALSAMYA 467
Query: 379 KCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLS 438
KCGSL + R+ D++S NAM++ + +G G EG+ F ++ G +PD+++F++
Sbjct: 468 KCGSLDDGYRIFWRMPARDVISWNAMISGLSQNGRGNEGLELFEKMCLEGTKPDNVTFVN 527
Query: 439 ALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMA 497
LSAC H G + G +F +M +++ P+++HY CMVD+LSRAG+L EA EFI+ +
Sbjct: 528 LLSACSHMGLVDRGWVYFKMMFDEFNIAPTVEHYACMVDILSRAGKLHEAKEFIESATVD 587
Query: 498 PDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTR 557
+W LL +H + + G A ++L+EL + YV+L++++ G+W D+ R R
Sbjct: 588 HGLCLWRILLAASKNHRDYDLGAYAGEKLMELGSLESSAYVLLSSIYTALGKWEDVERVR 647
Query: 558 QKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEI 596
MK R + K PGCSWIE + H F D H + +EI
Sbjct: 648 GMMKARGVTKEPGCSWIELKSLTHVFVVGDNMHPQIDEI 686
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/425 (24%), Positives = 190/425 (44%), Gaps = 46/425 (10%)
Query: 101 LPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNE 160
L C R ++L G+ H I G S+ + N L+++Y +C S FS N
Sbjct: 17 LVHCTRHKQLRKGRALHARILVTGSFSSTQIANSLINLYAKC----------SHFSKANL 66
Query: 161 VSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAF---SM 217
V FD + + + ++SWN +I+ + + + +
Sbjct: 67 V---------------------FDSINN----KDVVSWNCLINAFSQQQAHAPSLHVMHL 101
Query: 218 FRDLLM-RDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMY 276
FR L+M I P + T V A + ++ R G++ HALA+ D F +L+ MY
Sbjct: 102 FRQLVMAHKTIVPNAHTLTGVFTAASTLSDSRAGRQAHALAVKTACSHDVFAASSLLNMY 161
Query: 277 CRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLD--LTPDIYT 334
C+ + A+ FDE+ + G+ A +LF M + + +
Sbjct: 162 CKTGLVFEARDLFDEMPERNAVSWATMISGYASQELADEAFELFKLMRHEEKGKNENEFV 221
Query: 335 VGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS 394
+LSA + + G+QVH+ A++ G V + ALV MY KCGSL+ A ++
Sbjct: 222 FTSVLSALTCYMLVNTGRQVHSLAMKNGLVCIVSVANALVTMYVKCGSLEDALKTFELSG 281
Query: 395 TPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSE 454
+ ++ +AM+T +A G + + F + SG P + + ++AC A +I G +
Sbjct: 282 NKNSITWSAMVTGFAQFGDSDKALKLFYDMHQSGELPSEFTLVGVINACSDACAIVEGRQ 341
Query: 455 F--FDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVS 512
+ L Y+++ L + +VD+ ++ G + +A + + I PD V+W +++ G V
Sbjct: 342 MHGYSLKLGYELQ--LYVLSALVDMYAKCGSIVDARKGFECI-QQPDVVLWTSIITGYVQ 398
Query: 513 HGNLE 517
+G+ E
Sbjct: 399 NGDYE 403
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 113/252 (44%), Gaps = 36/252 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGS+ DA+K F+ + + D V W S++T
Sbjct: 364 MYAKCGSIVDARKGFECIQQPDVVLWTSIIT----------------------------- 394
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
G+ QNG E A+ + +MQ G+ PN T++SVL AC+ L L GK+ H I
Sbjct: 395 -------GYVQNGDYEGALNLYGKMQLGGVIPNDLTMASVLKACSNLAALDQGKQMHAGI 447
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ F + + L +Y +CG + +IF + ++ +S N +I G +NG E
Sbjct: 448 IKYNFSLEIPIGSALSAMYAKCGSLDDGYRIFWRMPARDVISWNAMISGLSQNGRGNEGL 507
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
ELF++M G + +++ +++S L D + F+ + I PT + ++
Sbjct: 508 ELFEKMCLEGTKPDNVTFVNLLSACSHMGLVDRGWVYFKMMFDEFNIAPTVEHYACMVDI 567
Query: 241 CADMNSLRKGKE 252
+ L + KE
Sbjct: 568 LSRAGKLHEAKE 579
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 62/118 (52%), Gaps = 4/118 (3%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGSLDD ++F MP RD +SWN++++ + NG E LE E+M L+ P+ V
Sbjct: 465 MYAKCGSLDDGYRIFWRMPARDVISWNAMISGLSQNGRGNEGLELFEKM-CLEGTKPDNV 523
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE--GLEPNARTLSSVLPACARLQKLSLGKEF 116
++ ++ + G + + F+M + + P + ++ +R KL KEF
Sbjct: 524 TFVNLLSACSHMGLVDRG-WVYFKMMFDEFNIAPTVEHYACMVDILSRAGKLHEAKEF 580
>gi|297833652|ref|XP_002884708.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330548|gb|EFH60967.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1028
Score = 308 bits (788), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 184/596 (30%), Positives = 300/596 (50%), Gaps = 81/596 (13%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG+L+DA+++F+ M +R DN V
Sbjct: 472 MYAKCGALEDARQIFEHMCDR-------------------------------DN-----V 495
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ +IGG+ Q+ + EA + RM + G+ + L+S L AC + L GK+ H
Sbjct: 496 SWNTIIGGYVQDENESEAFDLFMRMNSCGIVSDGACLASTLKACTNVHGLYQGKQVHCLS 555
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G + L+D+Y +CG + +AR
Sbjct: 556 VKCGLDRVLHTGSSLIDMYSKCGI-------------------------------IEDAR 584
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
++F M V +S N++I+GY N+L +EA +F+++L + G+ P+ TF +++ A
Sbjct: 585 KVFSSMPEWSV----VSMNALIAGYSQNNL-EEAVVLFQEMLTK-GVNPSEITFATIVEA 638
Query: 241 CADMNSLRKGKEIHALAIALGLQSD-TFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
C SL G + H I G S+ ++G +L+ +Y + + A F E+ + ++++
Sbjct: 639 CHKPESLTLGTQFHGQIIKWGFSSEGEYLGISLLGLYMNSRRMAEACALFSELSSPKSIV 698
Query: 300 ---GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHA 356
G M G N + A++ + EM PD T +L CS L+++ G+ +H+
Sbjct: 699 LWTGMMS--GHSQNGFYEEALKFYKEMRHDGALPDQATFVTVLRVCSVLSSLREGRAIHS 756
Query: 357 YAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST-PDLVSQNAMLTAYAMHGHGK 415
+D D L+DMYAKCG +K + + + ++VS N+++ YA +G+ +
Sbjct: 757 LIFHLAHDLDELTSNTLIDMYAKCGDMKSSSQVFDEMRRRSNVVSWNSLINGYAKNGYAE 816
Query: 416 EGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCM 474
+ + F + S PD I+FL L+AC HAG + G + F++M Y ++ + H CM
Sbjct: 817 DALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACM 876
Query: 475 VDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNT 534
VDLL R G L EA +FI+ + PD+ +W +LLG C HG+ G+IAA+RLIELEP N+
Sbjct: 877 VDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDMRGEIAAERLIELEPQNS 936
Query: 535 GNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSH 590
YV+L+N++A GRW + R+ M+DR + K PG SWI+ H F A D+SH
Sbjct: 937 SAYVLLSNIYASQGRWEEANALRKAMRDRGVKKVPGYSWIDVGQRRHIFAAGDQSH 992
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 134/518 (25%), Positives = 222/518 (42%), Gaps = 76/518 (14%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y G L DA+ +F MP D V+WN
Sbjct: 271 YISLGKLKDARLLFGEMPSPDVVAWN---------------------------------- 296
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
+I G + G + AI M+ ++ TL SVL A + L LG H
Sbjct: 297 --VMISGHGKRGCEIVAIEYFLNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAI 354
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
+ G SN +V + LV +Y +C M +A K+F +N+V N +I GY NG + E
Sbjct: 355 KLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEERNDVLWNAMIRGYAHNGESHKVME 414
Query: 182 LFDQMEHLGVQRGIISWNSMISGY-VDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LF M+ SGY +D+ FTF S+L
Sbjct: 415 LFMDMKS--------------SGYNIDD-----------------------FTFTSLLST 437
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA + L G + H++ I L + FVG ALV+MY + L A+ F+ + + +N+
Sbjct: 438 CAVSHDLEMGSQFHSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQIFEHMCDRDNVSW 497
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G+ + A LF M S + D + L AC+++ + +GKQVH +++
Sbjct: 498 NTIIGGYVQDENESEAFDLFMRMNSCGIVSDGACLASTLKACTNVHGLYQGKQVHCLSVK 557
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
CG D +H G++L+DMY+KCG ++ AR + + +VS NA++ Y+ + +E +
Sbjct: 558 CGLDRVLHTGSSLIDMYSKCGIIEDARKVFSSMPEWSVVSMNALIAGYS-QNNLEEAVVL 616
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHY-TCMVDLLS 479
F+ +L G P I+F + + AC S+ G++F + + ++ ++ L
Sbjct: 617 FQEMLTKGVNPSEITFATIVEACHKPESLTLGTQFHGQIIKWGFSSEGEYLGISLLGLYM 676
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
+ + EA ++ V+W ++ G +G E
Sbjct: 677 NSRRMAEACALFSELSSPKSIVLWTGMMSGHSQNGFYE 714
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 143/548 (26%), Positives = 235/548 (42%), Gaps = 71/548 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KC + A+K F + E+D +WNS+++ ++ G + L +S +N
Sbjct: 104 LYAKCAQVSYAEKQFNSL-EKDVTAWNSMLSMYSSIGQPGKVLRSF--VSLFEN------ 154
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
++F PN T S VL AR + G++ H +
Sbjct: 155 --------------------LIF--------PNKFTFSIVLSTSARETNVEFGRQIHCSM 186
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G N + LVD+Y +C + A ++F N V + GY + G EA
Sbjct: 187 IKMGLERNSYCGGALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYVKAGLPEEAV 246
Query: 181 ELFDQM-------EHLGV------------------------QRGIISWNSMISGYVDNS 209
+F++M +HL +++WN MISG+
Sbjct: 247 IVFERMRGEGHRPDHLAFVTVINTYISLGKLKDARLLFGEMPSPDVVAWNVMISGHGKRG 306
Query: 210 LYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVG 269
A F ++ + ++ T T GSVL A + +L G +HA AI LGL S+ +VG
Sbjct: 307 CEIVAIEYFLNM-RKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVG 365
Query: 270 GALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLT 329
+LV MY + + + AA F+ +E ++L G+ N + M+LF +M S
Sbjct: 366 SSLVSMYSKCEKMEAAAKVFEALEERNDVLWNAMIRGYAHNGESHKVMELFMDMKSSGYN 425
Query: 330 PDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLA 389
D +T +LS C+ +E G Q H+ I+ ++ +G ALVDMYAKCG+L+ AR
Sbjct: 426 IDDFTFTSLLSTCAVSHDLEMGSQFHSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQI 485
Query: 390 YKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSI 449
++ + D VS N ++ Y + E F R+ + G D S L AC + +
Sbjct: 486 FEHMCDRDNVSWNTIIGGYVQDENESEAFDLFMRMNSCGIVSDGACLASTLKACTNVHGL 545
Query: 450 KTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
G + L + L + ++D+ S+ G + +A + +P V AL+ G
Sbjct: 546 YQGKQVHCLSVKCGLDRVLHTGSSLIDMYSKCGIIEDARKVFSSMP-EWSVVSMNALIAG 604
Query: 510 CVSHGNLE 517
S NLE
Sbjct: 605 -YSQNNLE 611
>gi|147862014|emb|CAN80898.1| hypothetical protein VITISV_028645 [Vitis vinifera]
Length = 822
Score = 308 bits (788), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 174/542 (32%), Positives = 278/542 (51%), Gaps = 3/542 (0%)
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W+ +I + +NG+ ++A+ +M +G+ P+ T SVL AC L GKE H I
Sbjct: 243 WNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTYPSVLKACGEELDLGFGKEVHESIN 302
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
+ + V N L+ +Y +CG + A +F K ++ VS N++I Y G EA E
Sbjct: 303 ASRIKWSLIVHNALISMYGKCGKVGIARDLFDKIPERDAVSWNSMISVYASMGMWNEAFE 362
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
LF M ++ II WN++ GY+ Y A + + + G S L AC
Sbjct: 363 LFGSMWAEDIELNIIIWNTIAGGYLRTGNYKGALELLSQM-RKXGSHLDSVALIIGLGAC 421
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK 301
+ + + GKEIH+ AI V +L+ MY R +DL A + F +E +
Sbjct: 422 SHIGDAKLGKEIHSFAIRSCFGEVDTVKNSLITMYSRCKDLKHAYLLFQLMEAKSLISWN 481
Query: 302 MKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRC 361
G + A L EML + P+ T+ +L C+ +A ++ GK+ H Y R
Sbjct: 482 SIISGCCHMDRSEEASFLLREMLLSGIEPNYVTIASVLPLCARVANLQHGKEFHCYMTRR 541
Query: 362 -GYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
+ + + ALVDMYA+ G + AR + + D ++ +M+ Y M G G+ +
Sbjct: 542 EDFKDHLLLWNALVDMYARSGKVLEARRVFDMLGERDKMTYTSMIAGYGMQGEGQAALKL 601
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMVDLLS 479
F + +PDHI+ ++ LSAC H+G + G F+ M + Y + P L+H+ CM DL
Sbjct: 602 FEEMNNFQIKPDHITMIAVLSACSHSGLVTQGQLLFEKMRSLYGLTPHLEHFACMTDLFG 661
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
RAG L +A E I+ +P P MW L+G C H N E G+ AA++L+E++P N G YV+
Sbjct: 662 RAGLLNKAKEIIRNMPYKPTPAMWATLIGACRIHRNTEIGEWAAEKLLEMKPENPGYYVL 721
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTI 599
+AN++A AG W+ LA+ R M+D + K+PGC+W++ F D S+ ++EIY +
Sbjct: 722 IANMYAAAGCWNKLAKVRXFMRDLGVRKAPGCAWVDVGTGFSPFLVDDTSNANADEIYPL 781
Query: 600 ID 601
++
Sbjct: 782 LE 783
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 114/390 (29%), Positives = 185/390 (47%), Gaps = 41/390 (10%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKCG + A+ +F +PERD VSWNS+++ A+ G+ EA E M + D E N++
Sbjct: 319 MYGKCGKVGIARDLFDKIPERDAVSWNSMISVYASMGMWNEAFELFGSMWAEDIEL-NII 377
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
W+ + GG+ + G + A+ +L +M+ G ++ L L AC+ + LGKE H +
Sbjct: 378 IWNTIAGGYLRTGNYKGALELLSQMRKXGSHLDSVALIIGLGACSHIGDAKLGKEIHSFA 437
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R+ F V N L+ +Y RC D+ A +F K+ +S N+II G C
Sbjct: 438 IRSCFGEVDTVKNSLITMYSRCKDLKHAYLLFQLMEAKSLISWNSIISGCC--------- 488
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
++D S +EA + R++L+ GIEP T SVL
Sbjct: 489 ------------------------HMDRS--EEASFLLREMLL-SGIEPNYVTIASVLPL 521
Query: 241 CADMNSLRKGKEIHA-LAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
CA + +L+ GKE H + + + ALV+MY R ++ A+ FD + + +
Sbjct: 522 CARVANLQHGKEFHCYMTRREDFKDHLLLWNALVDMYARSGKVLEARRVFDMLGERDKMT 581
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
G+ A++LF EM + + PD T+ +LSACS + +G Q+ +
Sbjct: 582 YTSMIAGYGMQGEGQAALKLFEEMNNFQIKPDHITMIAVLSACSHSGLVTQG-QLLFEKM 640
Query: 360 RCGYDSDVHIG--TALVDMYAKCGSLKHAR 387
R Y H+ + D++ + G L A+
Sbjct: 641 RSLYGLTPHLEHFACMTDLFGRAGLLNKAK 670
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 103/200 (51%), Gaps = 1/200 (0%)
Query: 55 ETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGK 114
E +L+SW+++I G EEA +L M G+EPN T++SVLP CAR+ L GK
Sbjct: 473 EAKSLISWNSIISGCCHMDRSEEASFLLREMLLSGIEPNYVTIASVLPLCARVANLQHGK 532
Query: 115 EFHGYIT-RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCEN 173
EFH Y+T R F + + N LVD+Y R G +L A ++F +++++ ++I GY
Sbjct: 533 EFHCYMTRREDFKDHLLLWNALVDMYARSGKVLEARRVFDMLGERDKMTYTSMIAGYGMQ 592
Query: 174 GNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFT 233
G A +LF++M + ++ I+ +++S + L + +F + G+ P
Sbjct: 593 GEGQAALKLFEEMNNFQIKPDHITMIAVLSACSHSGLVTQGQLLFEKMRSLYGLTPHLEH 652
Query: 234 FGSVLIACADMNSLRKGKEI 253
F + L K KEI
Sbjct: 653 FACMTDLFGRAGLLNKAKEI 672
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 150/364 (41%), Gaps = 50/364 (13%)
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
S+L +C D+ SL +G+++H I+LG + + LV Y + LV A + + +
Sbjct: 179 SLLSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLVDAHVITENSNIL 238
Query: 296 ENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVH 355
+ + N + A+ + +M+ + PD +T +L AC + GK+VH
Sbjct: 239 HPFPWNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTYPSVLKACGEELDLGFGKEVH 298
Query: 356 AY--AIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGH 413
A R + VH AL+ MY KCG + AR + +I D VS N+M++ YA G
Sbjct: 299 ESINASRIKWSLIVH--NALISMYGKCGKVGIARDLFDKIPERDAVSWNSMISVYASMGM 356
Query: 414 GKEGIAHFRRILAS-----------------------------------GFRPDHISFLS 438
E F + A G D ++ +
Sbjct: 357 WNEAFELFGSMWAEDIELNIIIWNTIAGGYLRTGNYKGALELLSQMRKXGSHLDSVALII 416
Query: 439 ALSACVHAGSIKTGSEF--FDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPM 496
L AC H G K G E F + + + ++K+ ++ + SR +L AY + ++
Sbjct: 417 GLGACSHIGDAKLGKEIHSFAIRSCFGEVDTVKN--SLITMYSRCKDLKHAY-LLFQLME 473
Query: 497 APDSVMWGALLGGCVSHGNLEFGQIAADRLI--ELEPNNTGNYVMLANLFAYAGRWSDLA 554
A + W +++ GC E ++ +EP NYV +A++ R ++L
Sbjct: 474 AKSLISWNSIISGCCHMDRSEEASFLLREMLLSGIEP----NYVTIASVLPLCARVANLQ 529
Query: 555 RTRQ 558
++
Sbjct: 530 HGKE 533
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 118/239 (49%), Gaps = 9/239 (3%)
Query: 282 LVAAQMAFDEIEN--IENLLGKMKEDGFEPNVY----TWNAMQLFSEMLSLDLTPDIYTV 335
L +AQ F ++ I++LL +KE N+ T + ++L + S DL ++ +
Sbjct: 120 LESAQETFTSVDASMIDSLLTSLKEFTSRGNLLDAFKTVSLIRLHASSASQDLI--VHPI 177
Query: 336 GIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST 395
+LS+C+ + ++ G+Q+H + I G++ + LV Y+ L A + + +
Sbjct: 178 SSLLSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLVDAHVITENSNI 237
Query: 396 PDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEF 455
N ++++Y +G ++ ++ +++++ G RPD+ ++ S L AC + G E
Sbjct: 238 LHPFPWNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTYPSVLKACGEELDLGFGKEV 297
Query: 456 FDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
+ + +K SL + ++ + + G++G A + KIP D+V W +++ S G
Sbjct: 298 HESINASRIKWSLIVHNALISMYGKCGKVGIARDLFDKIP-ERDAVSWNSMISVYASMG 355
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 61/124 (49%), Gaps = 6/124 (4%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY + G + +A++VF M+ ERD +++ S++ G AL+ E M++ + P+ +
Sbjct: 557 MYARSGKVLEARRVFDMLGERDKMTYTSMIAGYGMQGEGQAALKLFEEMNNFQIK-PDHI 615
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQA-EGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
+ AV+ + +G + + +M++ GL P+ + + R L+ KE
Sbjct: 616 TMIAVLSACSHSGLVTQGQLLFEKMRSLYGLTPHLEHFACMTDLFGRAGLLNKAKE---- 671
Query: 120 ITRN 123
I RN
Sbjct: 672 IIRN 675
>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g15930-like [Cucumis
sativus]
Length = 744
Score = 308 bits (788), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 170/578 (29%), Positives = 292/578 (50%), Gaps = 70/578 (12%)
Query: 57 PNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEF 116
PNL W+ +I G+++ + + + + M G++P+ T + R L G++
Sbjct: 102 PNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQL 161
Query: 117 HGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNV 176
HG++ ++G N FV LV +Y CG + +A +F C +V
Sbjct: 162 HGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFD----------------VCPKADV 205
Query: 177 AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDG-IEPTSFTFG 235
I+WN +IS Y ++E+ +F L+M D + PT+ T
Sbjct: 206 -------------------ITWNMIISAYNKVGKFEESRRLF--LVMEDKQVLPTTVTLV 244
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYC------------------ 277
VL AC+ + LR GK++H+ ++S+ + A+++MY
Sbjct: 245 LVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNR 304
Query: 278 ---RYQDLVAAQMAFDEIENIENLLGKMKE----------DGFEPNVYTWNAMQLFSEML 324
+ +V+ EI+ N KM E DG+ + A++LF M
Sbjct: 305 DIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQ 364
Query: 325 SLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLK 384
+ ++ PD +T+ +L+AC+ L +E G+ + Y R +D+ + AL+DMY KCG +
Sbjct: 365 ATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVD 424
Query: 385 HARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACV 444
A ++ +S D + AM+ A++GHG++ + F +L + PD I+++ LSAC
Sbjct: 425 KAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACT 484
Query: 445 HAGSIKTGSEFF-DLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMW 503
H G + G ++F + + + ++P++ HY C+VDLL+RAG L EAYE I+ +P+ +S++W
Sbjct: 485 HTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVW 544
Query: 504 GALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDR 563
GALL GC + + ++ +++ELEP+N YV+L N++A RW+DL RQ M D+
Sbjct: 545 GALLAGCRVYRESDMAEMVVKQILELEPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDK 604
Query: 564 RMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
+ K PGCS IE +H+F A DRSH +++ I +D
Sbjct: 605 GIKKXPGCSLIEMNGRVHEFVAGDRSHPQTKNIDAKLD 642
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 152/296 (51%), Gaps = 8/296 (2%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY CG +D A +F+ M RD +SW ++V+ G + A ++M D V
Sbjct: 284 MYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKD-----YV 338
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A+I G+ ++ +EA+ + MQA ++P+ T+ SVL ACA L L LG+ YI
Sbjct: 339 SWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYI 398
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
RN ++ FV N L+D+Y +CGD+ A IF + S +++ + +IVG NG+ +A
Sbjct: 399 DRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKAL 458
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
++F M + I++ ++S L D+ F + + GIEP +G ++
Sbjct: 459 DMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDL 518
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
A L KE + + + +++++ V GAL+ Y++ A+M +I +E
Sbjct: 519 LARAGRL---KEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELE 571
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/192 (19%), Positives = 83/192 (43%), Gaps = 6/192 (3%)
Query: 328 LTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYA--KCGSLKH 385
+P + + +L C S M++ +QVH AI+ G +++ + ++ + G ++
Sbjct: 35 FSPPTHPLISLLETCES---MDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQY 91
Query: 386 ARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVH 445
AR + I P+L N M+ Y+ + G++ + +L G +PD +F
Sbjct: 92 ARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTR 151
Query: 446 AGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGA 505
+++ G + + + ++ ++ +T +V + G+L A P A D + W
Sbjct: 152 DIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKA-DVITWNM 210
Query: 506 LLGGCVSHGNLE 517
++ G E
Sbjct: 211 IISAYNKVGKFE 222
>gi|357474955|ref|XP_003607763.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355508818|gb|AES89960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 871
Score = 308 bits (788), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 183/576 (31%), Positives = 288/576 (50%), Gaps = 69/576 (11%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y KCG L DA+KVF +P+R ++VS
Sbjct: 179 YSKCGKLRDARKVFDEIPDR------------------------------------SVVS 202
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W+++I + QN EE + + RM+ L+ N T+ S++ AC +L L GK HGY+
Sbjct: 203 WTSMIVAYVQNECAEEGLMLFNRMREGFLDGNVFTVGSLVTACTKLGCLHQGKWVHGYVI 262
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
+NG N ++ L+++Y +CGD+ A +F +FS+ C G+
Sbjct: 263 KNGIEINSYLATSLLNMYVKCGDIGDARSVFDEFSVST-----------CGGGD------ 305
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
++ W +MI GY A +F D I P S T S+L AC
Sbjct: 306 ------------DLVFWTAMIVGYTQRGYPQAALELFTDKKWYR-ILPNSVTLASLLSAC 352
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK 301
A + ++ GK +H L + GL DT + +LV+MY + + A F + + +
Sbjct: 353 AQLENIVMGKLLHVLVVKYGLD-DTSLRNSLVDMYAKCGLIPDAHYVFATTVDKDVVSWN 411
Query: 302 MKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRC 361
G+ + + A+ LF+ M PD TV +LSAC+S+ + G +H +A++
Sbjct: 412 SVISGYAQSGSAYEALDLFNRMRMESFLPDAVTVVGVLSACASVGAHQIGLSLHGFALKY 471
Query: 362 GY-DSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
G S +++GTAL++ YAKCG AR+ + + + V+ AM+ M G G +A
Sbjct: 472 GLVSSSIYVGTALLNFYAKCGDATSARMVFDGMGEKNAVTWAAMIGGCGMQGDGVGSLAL 531
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLS 479
FR +L P+ + F + L+AC H+G ++ G FD M + PS+KHY CMVDLL+
Sbjct: 532 FRDMLKEELVPNEVVFTTLLAACSHSGMVEEGLMIFDFMCKELNFVPSMKHYACMVDLLA 591
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
RAG L EA +FI K+P+ P ++GA L GC H N +FG++A R++EL P+ YV+
Sbjct: 592 RAGNLQEALDFIDKMPVQPGVGVFGAFLHGCGLHSNFDFGEVAIRRMLELHPDQACYYVL 651
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIE 575
++NL+A GRW + R+ +K R ++K PG S +E
Sbjct: 652 ISNLYASDGRWGMVKEVREMIKQRGLNKVPGVSLVE 687
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 116/458 (25%), Positives = 191/458 (41%), Gaps = 100/458 (21%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG + DA+ VF V+ C +LV
Sbjct: 279 MYVKCGDIGDARSVFDEFS----------VSTCGGGD--------------------DLV 308
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
W+A+I G+TQ GY + A+ + + + PN+ TL+S+L ACA+L+ + +GK H +
Sbjct: 309 FWTAMIVGYTQRGYPQAALELFTDKKWYRILPNSVTLASLLSACAQLENIVMGKLLHVLV 368
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G + + + N LVD+Y +CG + A +F+ K+ VS N++I GY ++G+ EA
Sbjct: 369 VKYG-LDDTSLRNSLVDMYAKCGLIPDAHYVFATTVDKDVVSWNSVISGYAQSGSAYEAL 427
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+LF++M + P + T VL A
Sbjct: 428 DLFNRMR------------------------------------MESFLPDAVTVVGVLSA 451
Query: 241 CADMNSLRKGKEIHALAIALGL-QSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
CA + + + G +H A+ GL S +VG AL+ Y + D +A+M FD +
Sbjct: 452 CASVGAHQIGLSLHGFALKYGLVSSSIYVGTALLNFYAKCGDATSARMVFDGMG------ 505
Query: 300 GKMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSACSSL 345
E N TW AM LF +ML +L P+ +L+ACS
Sbjct: 506 --------EKNAVTWAAMIGGCGMQGDGVGSLALFRDMLKEELVPNEVVFTTLLAACSHS 557
Query: 346 ATMERGKQVHAYAIR-CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST-PDLVSQNA 403
+E G + + + + + +VD+ A+ G+L+ A ++ P + A
Sbjct: 558 GMVEEGLMIFDFMCKELNFVPSMKHYACMVDLLARAGNLQEALDFIDKMPVQPGVGVFGA 617
Query: 404 MLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALS 441
L +H + G RR+L PD + +S
Sbjct: 618 FLHGCGLHSNFDFGEVAIRRMLE--LHPDQACYYVLIS 653
>gi|15228117|ref|NP_181268.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216848|sp|Q9ZUT5.1|PP191_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g37310
gi|4056485|gb|AAC98051.1| hypothetical protein [Arabidopsis thaliana]
gi|110741249|dbj|BAF02175.1| hypothetical protein [Arabidopsis thaliana]
gi|330254288|gb|AEC09382.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 308 bits (788), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 177/550 (32%), Positives = 282/550 (51%), Gaps = 70/550 (12%)
Query: 87 AEGLEPNARTLSSVLPA---CARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCG 143
++ P++ ++S VL A C SL ++ HG++ R GF S+ FV NG++ Y +C
Sbjct: 122 SDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCD 181
Query: 144 DMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMIS 203
N+ AR++FD+M +R ++SWNSMIS
Sbjct: 182 -------------------------------NIESARKVFDEMS----ERDVVSWNSMIS 206
Query: 204 GYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQ 263
GY + +++ M++ +L +P T SV AC + L G E+H I +Q
Sbjct: 207 GYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQ 266
Query: 264 SDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEM 323
D + A++ Y + L A+ FDE+ +++ G+ + AM LFSEM
Sbjct: 267 MDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEM 326
Query: 324 LSLDLT-------------------------------PDIYTVGIILSACSSLATMERGK 352
S+ L+ P+ T+ +L + + + ++ GK
Sbjct: 327 ESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGK 386
Query: 353 QVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHG 412
++HA+AIR G D+++++ T+++D YAK G L A+ + L++ A++TAYA+HG
Sbjct: 387 EIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHG 446
Query: 413 HGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFD-LMAYYDVKPSLKHY 471
+ F ++ G +PD ++ + LSA H+G FD ++ YD++P ++HY
Sbjct: 447 DSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHY 506
Query: 472 TCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEP 531
CMV +LSRAG+L +A EFI K+P+ P + +WGALL G G+LE + A DRL E+EP
Sbjct: 507 ACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEP 566
Query: 532 NNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHD 591
NTGNY ++ANL+ AGRW + R KMK + K PG SWIE + F A D S +
Sbjct: 567 ENTGNYTIMANLYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWIETEKGLRSFIAKDSSCE 626
Query: 592 RSEEIYTIID 601
RS+E+Y II+
Sbjct: 627 RSKEMYEIIE 636
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/341 (29%), Positives = 165/341 (48%), Gaps = 42/341 (12%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y KC +++ A+KVF M ERD +VS
Sbjct: 177 YTKCDNIESARKVFDEMSERD------------------------------------VVS 200
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQA-EGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
W+++I G++Q+G E+ M M A +PN T+ SV AC + L G E H +
Sbjct: 201 WNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKM 260
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
N + + N ++ Y +CG + A +F + S K+ V+ II GY +G V EA
Sbjct: 261 IENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAM 320
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LF +ME +G+ +WN+MISG + N+ ++E + FR+++ R G P + T S+L +
Sbjct: 321 ALFSEMESIGLS----TWNAMISGLMQNNHHEEVINSFREMI-RCGSRPNTVTLSSLLPS 375
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
++L+ GKEIHA AI G ++ +V ++++ Y + L+ AQ FD ++ +
Sbjct: 376 LTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAW 435
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSA 341
+ + + +A LF +M L PD T+ +LSA
Sbjct: 436 TAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSA 476
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 95/297 (31%), Positives = 146/297 (49%), Gaps = 12/297 (4%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y KCGSLD A+ +F M E+D V++ ++++ A+GLV EA+ M S+ L +
Sbjct: 279 YAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESI-----GLST 333
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W+A+I G QN + EE I M G PN TLSS+LP+ L GKE H +
Sbjct: 334 WNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAI 393
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
RNG +N +V ++D Y + G +L A ++F ++ ++ II Y +G+ A
Sbjct: 394 RNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACS 453
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
LFDQM+ LG + ++ +++S + + D A +F +L + IEP G AC
Sbjct: 454 LFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEP-----GVEHYAC 508
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTF--VGGALVEMYCRYQDLVAAQMAFDEIENIE 296
R GK A+ + D V GAL+ DL A+ A D + +E
Sbjct: 509 MVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEME 565
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 109/498 (21%), Positives = 194/498 (38%), Gaps = 111/498 (22%)
Query: 155 FSIK-NEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDE 213
FSIK + + +I Y +A +FD++ R S+N+++ Y +Y +
Sbjct: 51 FSIKPDNFLASKLISFYTRQDRFRQALHVFDEI----TVRNAFSYNALLIAYTSREMYFD 106
Query: 214 AFSMFRDLL-----MRDGIEPTSFTFGSVLIA---CADMNSLRKGKEIHALAIALGLQSD 265
AFS+F + D P S + VL A C D +++H I G SD
Sbjct: 107 AFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSD 166
Query: 266 TFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAM-------- 317
FVG ++ Y + ++ +A+ FDE+ E +V +WN+M
Sbjct: 167 VFVGNGMITYYTKCDNIESARKVFDEMS--------------ERDVVSWNSMISGYSQSG 212
Query: 318 ------QLFSEMLSL-DLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIG 370
+++ ML+ D P+ TV + AC + + G +VH I D+ +
Sbjct: 213 SFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLC 272
Query: 371 TALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHG------------------ 412
A++ YAKCGSL +AR + +S D V+ A+++ Y HG
Sbjct: 273 NAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLS 332
Query: 413 -------------HGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM 459
H +E I FR ++ G RP+ ++ S L + ++ ++K G E
Sbjct: 333 TWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFA 392
Query: 460 AYYDVKPSLKHYTCMVDLLSRAGELGEA-------------------------------- 487
++ T ++D ++ G L A
Sbjct: 393 IRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSAC 452
Query: 488 --YEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLI---ELEPNNTGNYVMLAN 542
++ ++ + PD V A+L G+ + Q D ++ ++EP +Y + +
Sbjct: 453 SLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEP-GVEHYACMVS 511
Query: 543 LFAYAGRWSDLARTRQKM 560
+ + AG+ SD KM
Sbjct: 512 VLSRAGKLSDAMEFISKM 529
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 129/280 (46%), Gaps = 25/280 (8%)
Query: 252 EIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNV 311
++HA + ++ D F+ L+ Y R A FDEI + N + +
Sbjct: 43 QLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEI-TVRNAFS------YNALL 95
Query: 312 YTWNAMQLFSEMLSLDLT-------------PDIYTVGIIL---SACSSLATMERGKQVH 355
+ + +++ + SL L+ PD ++ +L S C +QVH
Sbjct: 96 IAYTSREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVH 155
Query: 356 AYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGK 415
+ IR G+DSDV +G ++ Y KC +++ AR + +S D+VS N+M++ Y+ G +
Sbjct: 156 GFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFE 215
Query: 416 EGIAHFRRILA-SGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCM 474
+ ++ +LA S F+P+ ++ +S AC + + G E M ++ L +
Sbjct: 216 DCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAV 275
Query: 475 VDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
+ ++ G L A ++ DSV +GA++ G ++HG
Sbjct: 276 IGFYAKCGSLDYARALFDEMS-EKDSVTYGAIISGYMAHG 314
>gi|449494221|ref|XP_004159483.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Cucumis sativus]
Length = 638
Score = 308 bits (788), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 161/503 (32%), Positives = 276/503 (54%), Gaps = 37/503 (7%)
Query: 100 VLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKN 159
+L CA+ + L GK H I G ++ N L+++Y +CG
Sbjct: 70 ILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCG---------------- 113
Query: 160 EVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFR 219
+V AR++FD+M R ++SWN+MI N +EA +
Sbjct: 114 ---------------SVDFARQVFDEMP----SRSLVSWNTMIGSLTQNGEENEALDLLL 154
Query: 220 DLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRY 279
+ R+G + FT SVL ACA +L + + +HA AI + + FV AL+++Y +
Sbjct: 155 QM-QREGTPFSEFTISSVLCACAAKCALSECQLLHAFAIKAAMDLNVFVATALLDVYAKC 213
Query: 280 QDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIIL 339
+ A F+ + + + G+ N A+ LF + L D + + ++
Sbjct: 214 GLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQALALFRKAWETGLKHDQFLMSSVI 273
Query: 340 SACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLV 399
AC+ LA M GKQV+A + G+ S++ + ++L+DMYAKCG ++ + ++ + ++V
Sbjct: 274 CACAGLAAMIEGKQVNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNVV 333
Query: 400 SQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM 459
NAM++ + H E + F ++ G P+ ++F+S LSAC H G +K G ++FDLM
Sbjct: 334 LWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGLVKKGQKYFDLM 393
Query: 460 AY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEF 518
+ + P++ HY+CMVD LSRAG++ EAY+ I K+P + MWG+LL C +HGNLE
Sbjct: 394 TKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWGSLLASCRTHGNLEL 453
Query: 519 GQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRD 578
++AA +L ++EP+N+GNY++L+N++A G+W ++A+ R+ +K+ + K G SWIE +D
Sbjct: 454 AEVAAKKLFDIEPHNSGNYLLLSNMYAANGKWDEVAKMRKLLKESDVKKERGKSWIEIKD 513
Query: 579 EIHKFRASDRSHDRSEEIYTIID 601
++H F +R+H + EIY+ ++
Sbjct: 514 KVHLFMVGERNHPKIVEIYSKLN 536
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 159/353 (45%), Gaps = 72/353 (20%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGS+D A++VF MP R +LV
Sbjct: 108 MYSKCGSVDFARQVFDEMPSR------------------------------------SLV 131
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ +IG TQNG + EA+ +L +MQ EG + T+SSVL ACA LS + H +
Sbjct: 132 SWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHAFA 191
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ N FV L+DVY +CG M A+ +F ++ V+ +++ GY
Sbjct: 192 IKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGY---------- 241
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
V N +Y++A ++FR G++ F SV+ A
Sbjct: 242 -------------------------VQNEMYEQALALFRK-AWETGLKHDQFLMSSVICA 275
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA + ++ +GK+++AL G S+ FV +L++MY + + + F ++E +L
Sbjct: 276 CAGLAAMIEGKQVNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLW 335
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ 353
G + + M LF +M + L+P+ T +LSAC + +++G++
Sbjct: 336 NAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGLVKKGQK 388
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 133/298 (44%), Gaps = 43/298 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KCG + DA VF+ MP+R V+W+S+
Sbjct: 209 VYAKCGLMKDAVCVFESMPDRSVVTWSSMA------------------------------ 238
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
G+ QN E+A+ + + GL+ + +SSV+ ACA L + GK+ + +
Sbjct: 239 ------AGYVQNEMYEQALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQVNALL 292
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+++GF SN FV + L+D+Y +CG + + K+F +N V N +I G + E
Sbjct: 293 SKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVM 352
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LF++M+ +G+ +++ S++S L + F + + P F + +
Sbjct: 353 ILFEKMQQMGLSPNDVTFVSVLSACGHMGLVKKGQKYFDLMTKEHHLAPNVFHY-----S 407
Query: 241 CADMNSLRKGK--EIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
C R G+ E + L L + + G+L+ + +L A++A ++ +IE
Sbjct: 408 CMVDTLSRAGQIFEAYDLISKLPFNASASMWGSLLASCRTHGNLELAEVAAKKLFDIE 465
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 97/234 (41%), Gaps = 48/234 (20%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG ++++ KVF+ + +R+ V WN++++ + + LE + E+
Sbjct: 310 MYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEK------------ 357
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
MQ GL PN T SVL AC + + G+++ +
Sbjct: 358 ------------------------MQQMGLSPNDVTFVSVLSACGHMGLVKKGQKYFDLM 393
Query: 121 TRNGFMS-NPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCE-NGNV-- 176
T+ ++ N F + +VD R G + A + SK S ++ C +GN+
Sbjct: 394 TKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWGSLLASCRTHGNLEL 453
Query: 177 --AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIE 228
A++LFD H ++S + Y N +DE M R LL ++
Sbjct: 454 AEVAAKKLFDIEPHNSGNYLLLS-----NMYAANGKWDEVAKM-RKLLKESDVK 501
>gi|449449950|ref|XP_004142727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Cucumis sativus]
Length = 712
Score = 307 bits (787), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 172/552 (31%), Positives = 278/552 (50%), Gaps = 47/552 (8%)
Query: 56 TPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKE 115
T N V+W+AVI G + GY E + M +E ++ + L A A L+ G+
Sbjct: 179 TRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRS 238
Query: 116 FHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGN 175
H + GF N FV N L +Y +CG + L F K
Sbjct: 239 IHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKM-------------------- 278
Query: 176 VAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFG 235
R L ++SW ++++ Y+ D F+ + + I P +TF
Sbjct: 279 ----RTL-----------DVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVI-PNEYTFS 322
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDL-----VAAQMAFD 290
+V+ CA+ L+ G+++HA + +G + V +++ +Y + +L V M F
Sbjct: 323 AVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFR 382
Query: 291 EIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMER 350
+I ++ + G Y A + S M S P+ + + +LS C S+A +E+
Sbjct: 383 DIITWSTIIAAYSQVG-----YGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQ 437
Query: 351 GKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAM 410
GKQ+HA+ + G + + +AL+ MYAKCGS+ A + D++S AM++ YA
Sbjct: 438 GKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYAE 497
Query: 411 HGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLK 469
HGH +E I F I G RPD ++F+ L+AC HAG + G +F+ M+ Y + PS +
Sbjct: 498 HGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKE 557
Query: 470 HYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIEL 529
HY CM+DLL RAG L +A I+ +P+ D V+W LL C HG+++ GQ AA +++L
Sbjct: 558 HYGCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLLRACRIHGDVDCGQRAAAEVLKL 617
Query: 530 EPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRS 589
+PN G ++ LAN+FA G+W + A R MK + + K PG S ++ +D + F + DRS
Sbjct: 618 DPNCAGTHITLANIFAAKGKWKEAANIRMLMKSKGVVKEPGWSSVKVKDSVFAFVSGDRS 677
Query: 590 HDRSEEIYTIID 601
H + E+IY I++
Sbjct: 678 HPQGEDIYNILE 689
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/413 (23%), Positives = 188/413 (45%), Gaps = 10/413 (2%)
Query: 148 ALKIFSKFSIKNEVS-CNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYV 206
+L + + FS K +++ N + + ++ +AR+LFDQ+ QR +SW ++ISGYV
Sbjct: 36 SLTLNAHFSNKVDLAEANNQLKILVKTNHLKDARDLFDQLP----QRDEVSWTNIISGYV 91
Query: 207 DNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDT 266
++S EA +F + ++ + F L C + G +H ++ GL +
Sbjct: 92 NSSDSSEALRLFSKMRLQSELRIDPFLLSLGLKTCGLGLNYLYGTNLHGFSVKTGLVNSV 151
Query: 267 FVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSL 326
FVG AL++MY + ++ + FDE+ + G Y+ + FS M
Sbjct: 152 FVGSALLDMYMKIGEIGRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRS 211
Query: 327 DLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHA 386
+ D Y I L A + + G+ +H ++ G+D + + +L MY KCG L +
Sbjct: 212 KVEYDSYAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYG 271
Query: 387 RLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHA 446
++++ T D+VS ++TAY G G+ F+R+ AS P+ +F + +S C +
Sbjct: 272 LHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANF 331
Query: 447 GSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGAL 506
+K G + + +L ++ L S+ GEL + + D + W +
Sbjct: 332 ARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKF-RDIITWSTI 390
Query: 507 LGGCVSHGNLEFGQIAADRLIELEPNNTG-NYVMLANLFAYAGRWSDLARTRQ 558
+ ++ + +G+ A + L + N LA++ + G + L + +Q
Sbjct: 391 IA---AYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQ 440
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/393 (23%), Positives = 169/393 (43%), Gaps = 53/393 (13%)
Query: 27 NSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQ 86
NS+ T G + L +M +LD +VSW+ ++ + Q G ++ + RM+
Sbjct: 256 NSLTTMYNKCGKLDYGLHTFRKMRTLD-----VVSWTTIVTAYIQMGKEDCGLQAFKRMR 310
Query: 87 AEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDML 146
A + PN T S+V+ CA +L G++ H ++ GF++ V N ++ +Y +CG++
Sbjct: 311 ASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELA 370
Query: 147 SALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYV 206
S K+F ++ ++ +TII Y + G EA E +M
Sbjct: 371 SVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMR------------------- 411
Query: 207 DNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDT 266
+G +P F SVL C M L +GK++HA +++GL+ +
Sbjct: 412 -----------------SEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTS 454
Query: 267 FVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSL 326
V AL+ MY + + A F + + + G+ + ++ A++LF + +
Sbjct: 455 MVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKV 514
Query: 327 DLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTA------LVDMYAKC 380
L PD T +L+ACS ++ G + D HI + ++D+ +
Sbjct: 515 GLRPDSVTFIGVLTACSHAGMVDLG-----FYYFNSMSKDYHITPSKEHYGCMIDLLCRA 569
Query: 381 GSLKHARLAYKRISTP-DLVSQNAMLTAYAMHG 412
G L A + + D V + +L A +HG
Sbjct: 570 GRLHDAETLIRSMPIQWDDVVWSTLLRACRIHG 602
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 130/300 (43%), Gaps = 47/300 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KCG L KVF M RD ++W++++ A + G EA E L RM S
Sbjct: 362 LYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRS--------- 412
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
EG +PN L+SVL C + L GK+ H ++
Sbjct: 413 ---------------------------EGPKPNEFALASVLSVCGSMAILEQGKQLHAHV 445
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
G V + L+ +Y +CG + A KIF + +S +I GY E+G+ EA
Sbjct: 446 LSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYAEHGHSQEAI 505
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL-I 239
ELF+ ++ +G++ +++ +++ + D F F + I P+ +G ++ +
Sbjct: 506 ELFENIQKVGLRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKEHYGCMIDL 565
Query: 240 ACADMNSLRKGK--EIHALAIALGLQSDTFVGGALVEMYCR-YQDLVAAQMAFDEIENIE 296
C R G+ + L ++ +Q D V L+ CR + D+ Q A E+ ++
Sbjct: 566 LC------RAGRLHDAETLIRSMPIQWDDVVWSTLLRA-CRIHGDVDCGQRAAAEVLKLD 618
>gi|297823509|ref|XP_002879637.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325476|gb|EFH55896.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 307 bits (787), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 180/619 (29%), Positives = 311/619 (50%), Gaps = 54/619 (8%)
Query: 24 VSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLF 83
V S + + A +G + A + + M+ D V+W+ ++ ++ G +EAI +
Sbjct: 5 VRLTSKIASLAKSGRITSARQMFDEMTDRDT-----VAWNTMLTSYSHLGLHQEAIALFT 59
Query: 84 RMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCG 143
+++ +P+ + +++L C L + LG++ + R+GF ++ V N L+D+Y +C
Sbjct: 60 QLRFSDSKPDDYSFTAILSTCGSLGNVRLGRKIQSLVIRSGFCASSPVNNSLIDMYGKCS 119
Query: 144 DMLSALKIFSKFSI--KNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSM 201
D LSA K+F +NEV+ +++ Y A ++F +M +R +WN M
Sbjct: 120 DTLSANKVFRDMCCHSRNEVTWCSLLFAYMNAEQFEAALDVFVEMP----KRVPFAWNIM 175
Query: 202 ISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALG 261
ISG+ + +F+++L + EP FTF S++ ACAD +++ G +HA+ + G
Sbjct: 176 ISGHAQCGKIESCLRLFKEMLESE-FEPDCFTFSSLMNACADSSNVVYGWMVHAVMVRNG 234
Query: 262 LQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG-----------KMKED----- 305
S +++ Y + L E+E+IE L K+ E
Sbjct: 235 WYSAVEAKNSVLSFYAK---LGCKDDVMRELESIEVLTQVSWNSIIDACVKVGETDKALE 291
Query: 306 ----GFEPNVYTW--------------NAMQLFSEMLSLDLTPDIYTVGIILSACSSLAT 347
E N+ TW A++ F EM+ + D + G +L ACS LA
Sbjct: 292 VFRLAPEKNIVTWTTMIAGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLAL 351
Query: 348 MERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTA 407
+ GK +H I CG+ ++G ALV++YAKCG +K + A+ I+ DLVS N ML A
Sbjct: 352 LGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKESNRAFGDIANKDLVSWNTMLFA 411
Query: 408 YAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKP 466
+ +HG + + + ++ASG +PD+++F+ L+ C H+G ++ G F+ M Y +
Sbjct: 412 FGVHGLADQALELYDNMIASGIKPDNVTFIGLLTTCSHSGLVEKGCAIFESMVKDYGIPL 471
Query: 467 SLKHYTCMVDLLSRAGELGEAYEFIKK----IPMAPDSVMWGALLGGCVSHGNLEFGQIA 522
+ H TCM+D+ R G L EA + + A ++ W ALLG C +H + E G+
Sbjct: 472 EVDHVTCMIDMFGRGGHLAEAKDLATTYNSLVINASNNSSWEALLGACSTHWHTELGREV 531
Query: 523 ADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHK 582
+ L EP+ ++V+L+NL+ +GRW + R++M +R M K+PGCSWIE + +
Sbjct: 532 SKVLKIAEPSEELSFVLLSNLYCSSGRWKEAEEVRREMVERGMRKTPGCSWIEVGNRVST 591
Query: 583 FRASDRSHDRSEEIYTIID 601
F SH R EE+ ++
Sbjct: 592 FVVGGSSHPRLEELSETLN 610
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 122/445 (27%), Positives = 206/445 (46%), Gaps = 19/445 (4%)
Query: 1 MYGKCGSLDDAKKVFKMM--PERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPN 58
MYGKC A KVF+ M R+ V+W S++ A N EA L+ + P
Sbjct: 114 MYGKCSDTLSANKVFRDMCCHSRNEVTWCSLLFA-YMNAEQFEA--ALDVFVEMPKRVP- 169
Query: 59 LVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHG 118
+W+ +I G Q G E + + M EP+ T SS++ ACA + G H
Sbjct: 170 -FAWNIMISGHAQCGKIESCLRLFKEMLESEFEPDCFTFSSLMNACADSSNVVYGWMVHA 228
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
+ RNG+ S N ++ Y + G ++ + +VS N+II + G +
Sbjct: 229 VMVRNGWYSAVEAKNSVLSFYAKLGCKDDVMRELESIEVLTQVSWNSIIDACVKVGETDK 288
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
A E+F L ++ I++W +MI+GY N ++A F + +M+ G++ F +G+VL
Sbjct: 289 ALEVF----RLAPEKNIVTWTTMIAGYGRNGDGEQALRFFVE-MMKSGVDSDHFAYGAVL 343
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
AC+ + L GK IH I G Q +VG ALV +Y + D+ + AF +I N + +
Sbjct: 344 HACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKESNRAFGDIANKDLV 403
Query: 299 LGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYA 358
F + A++L+ M++ + PD T +L+ CS +E+G +
Sbjct: 404 SWNTMLFAFGVHGLADQALELYDNMIASGIKPDNVTFIGLLTTCSHSGLVEKGCAIFESM 463
Query: 359 IR-CGYDSDVHIGTALVDMYAKCGSLKHAR---LAYKR--ISTPDLVSQNAMLTAYAMHG 412
++ G +V T ++DM+ + G L A+ Y I+ + S A+L A + H
Sbjct: 464 VKDYGIPLEVDHVTCMIDMFGRGGHLAEAKDLATTYNSLVINASNNSSWEALLGACSTHW 523
Query: 413 HGKEGIAHFRRILASGFRPDHISFL 437
H + G ++L + +SF+
Sbjct: 524 HTELG-REVSKVLKIAEPSEELSFV 547
>gi|449502685|ref|XP_004161713.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g47840-like [Cucumis
sativus]
Length = 712
Score = 307 bits (787), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 172/552 (31%), Positives = 278/552 (50%), Gaps = 47/552 (8%)
Query: 56 TPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKE 115
T N V+W+AVI G + GY E + M +E ++ + L A A L+ G+
Sbjct: 179 TRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRS 238
Query: 116 FHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGN 175
H + GF N FV N L +Y +CG + L F K
Sbjct: 239 IHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKM-------------------- 278
Query: 176 VAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFG 235
R L ++SW ++++ Y+ D F+ + + I P +TF
Sbjct: 279 ----RTL-----------DVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVI-PNEYTFS 322
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDL-----VAAQMAFD 290
+V+ CA+ L+ G+++HA + +G + V +++ +Y + +L V M F
Sbjct: 323 AVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFR 382
Query: 291 EIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMER 350
+I ++ + G Y A + S M S P+ + + +LS C S+A +E+
Sbjct: 383 DIITWSTIIAAYSQVG-----YGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQ 437
Query: 351 GKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAM 410
GKQ+HA+ + G + + +AL+ MYAKCGS+ A + D++S AM++ YA
Sbjct: 438 GKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYAE 497
Query: 411 HGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLK 469
HGH +E I F I G RPD ++F+ L+AC HAG + G +F+ M+ Y + PS +
Sbjct: 498 HGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKE 557
Query: 470 HYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIEL 529
HY CM+DLL RAG L +A I+ +P+ D V+W LL C HG+++ GQ AA +++L
Sbjct: 558 HYGCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLLRACRIHGDVDCGQRAAAEVLKL 617
Query: 530 EPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRS 589
+PN G ++ LAN+FA G+W + A R MK + + K PG S ++ +D + F + DRS
Sbjct: 618 DPNCAGTHITLANIFAAKGKWKEAANIRMLMKSKGVVKEPGWSSVKVKDSVFAFVSGDRS 677
Query: 590 HDRSEEIYTIID 601
H + E+IY I++
Sbjct: 678 HPQGEDIYNILE 689
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/388 (23%), Positives = 176/388 (45%), Gaps = 9/388 (2%)
Query: 172 ENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTS 231
+ ++ +AR+LFDQ+ QR +SW ++ISGYV++S EA +F + ++ +
Sbjct: 61 KTNHLKDARDLFDQLP----QRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSELRIDP 116
Query: 232 FTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDE 291
F L C + G +H ++ GL + FVG AL++MY + ++ + FDE
Sbjct: 117 FLLSLGLKTCGLGLNYLYGTNLHGFSVKXGLVNSVFVGSALLDMYMKIGEIGRSCKVFDE 176
Query: 292 IENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG 351
+ + G Y+ + FS M + D Y I L A + + G
Sbjct: 177 MPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHG 236
Query: 352 KQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMH 411
+ +H ++ G+D + + +L MY KCG L + ++++ T D+VS ++TAY
Sbjct: 237 RSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQM 296
Query: 412 GHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHY 471
G G+ F+R+ AS P+ +F + +S C + +K G + + +L
Sbjct: 297 GKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVA 356
Query: 472 TCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEP 531
++ L S+ GEL + + D + W ++ ++ + +G+ A + L +
Sbjct: 357 NSIMTLYSKCGELASVSKVFCSMKF-RDIITWSTIIA---AYSQVGYGEEAFEYLSRMRS 412
Query: 532 NNTG-NYVMLANLFAYAGRWSDLARTRQ 558
N LA++ + G + L + +Q
Sbjct: 413 EGPKPNEFALASVLSVCGSMAILEQGKQ 440
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/393 (23%), Positives = 169/393 (43%), Gaps = 53/393 (13%)
Query: 27 NSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQ 86
NS+ T G + L +M +LD +VSW+ ++ + Q G ++ + RM+
Sbjct: 256 NSLTTMYNKCGKLDYGLHTFRKMRTLD-----VVSWTTIVTAYIQMGKEDCGLQAFKRMR 310
Query: 87 AEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDML 146
A + PN T S+V+ CA +L G++ H ++ GF++ V N ++ +Y +CG++
Sbjct: 311 ASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELA 370
Query: 147 SALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYV 206
S K+F ++ ++ +TII Y + G EA E +M
Sbjct: 371 SVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMR------------------- 411
Query: 207 DNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDT 266
+G +P F SVL C M L +GK++HA +++GL+ +
Sbjct: 412 -----------------SEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTS 454
Query: 267 FVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSL 326
V AL+ MY + + A F + + + G+ + ++ A++LF + +
Sbjct: 455 MVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKV 514
Query: 327 DLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTA------LVDMYAKC 380
L PD T +L+ACS ++ G + D HI + ++D+ +
Sbjct: 515 GLRPDSVTFIGVLTACSHAGMVDLG-----FYYFNSMSKDYHITPSKEHYGCMIDLLCRA 569
Query: 381 GSLKHARLAYKRISTP-DLVSQNAMLTAYAMHG 412
G L A + + D V + +L A +HG
Sbjct: 570 GRLHDAETLIRSMPIQWDDVVWSTLLRACRIHG 602
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 130/300 (43%), Gaps = 47/300 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KCG L KVF M RD ++W++++ A + G EA E L RM S
Sbjct: 362 LYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRS--------- 412
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
EG +PN L+SVL C + L GK+ H ++
Sbjct: 413 ---------------------------EGPKPNEFALASVLSVCGSMAILEQGKQLHAHV 445
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
G V + L+ +Y +CG + A KIF + +S +I GY E+G+ EA
Sbjct: 446 LSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYAEHGHSQEAI 505
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL-I 239
ELF+ ++ +G++ +++ +++ + D F F + I P+ +G ++ +
Sbjct: 506 ELFENIQKVGLRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKEHYGCMIDL 565
Query: 240 ACADMNSLRKGK--EIHALAIALGLQSDTFVGGALVEMYCR-YQDLVAAQMAFDEIENIE 296
C R G+ + L ++ +Q D V L+ CR + D+ Q A E+ ++
Sbjct: 566 LC------RAGRLHDAETLIRSMPIQWDDVVWSTLLRA-CRIHGDVDCGQRAAAEVLKLD 618
>gi|15228064|ref|NP_181235.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206293|sp|Q9SJK9.1|PP189_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g36980, mitochondrial; Flags: Precursor
gi|4883614|gb|AAD31583.1| hypothetical protein [Arabidopsis thaliana]
gi|330254236|gb|AEC09330.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 625
Score = 307 bits (787), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 180/620 (29%), Positives = 318/620 (51%), Gaps = 55/620 (8%)
Query: 24 VSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLF 83
V S + + A +G + A + + M LD V+W+ ++ +++ G +EAI +
Sbjct: 5 VRLTSKIASLAKSGRIASARQVFDGMPELDT-----VAWNTMLTSYSRLGLHQEAIALFT 59
Query: 84 RMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCG 143
+++ +P+ + +++L CA L + G++ + R+GF ++ V N L+D+Y +C
Sbjct: 60 QLRFSDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCS 119
Query: 144 DMLSALKIFSKFSI--KNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSM 201
D LSA K+F +NEV+ +++ Y A ++F +M +R +WN M
Sbjct: 120 DTLSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMP----KRVAFAWNIM 175
Query: 202 ISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC-ADMNSLRKGKEIHALAIAL 260
ISG+ + S+F+++L + +P +TF S++ AC AD +++ G+ +HA+ +
Sbjct: 176 ISGHAHCGKLESCLSLFKEMLESE-FKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKN 234
Query: 261 GLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL--------------LGKMKED- 305
G S +++ Y + L + A E+E+IE L +G+ ++
Sbjct: 235 GWSSAVEAKNSVLSFYTK---LGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKAL 291
Query: 306 -----GFEPNVYTWN--------------AMQLFSEMLSLDLTPDIYTVGIILSACSSLA 346
E N+ TW A++ F EM+ + D + G +L ACS LA
Sbjct: 292 EVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLA 351
Query: 347 TMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLT 406
+ GK +H I CG+ ++G ALV++YAKCG +K A A+ I+ DLVS N ML
Sbjct: 352 LLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLF 411
Query: 407 AYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVK 465
A+ +HG + + + ++ASG +PD+++F+ L+ C H+G ++ G F+ M Y +
Sbjct: 412 AFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIP 471
Query: 466 PSLKHYTCMVDLLSRAGELGEAYEFIKK----IPMAPDSVMWGALLGGCVSHGNLEFGQI 521
+ H TCM+D+ R G L EA + + + ++ W LLG C +H + E G+
Sbjct: 472 LEVDHVTCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGRE 531
Query: 522 AADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIH 581
+ L EP+ ++V+L+NL+ GRW + R++M +R M K+PGCSWIE +++
Sbjct: 532 VSKVLKIAEPSEEMSFVLLSNLYCSTGRWKEGEDVRREMVERGMKKTPGCSWIEVGNQVS 591
Query: 582 KFRASDRSHDRSEEIYTIID 601
F D SH R EE+ ++
Sbjct: 592 TFVVGDSSHPRLEELSETLN 611
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 121/432 (28%), Positives = 197/432 (45%), Gaps = 31/432 (7%)
Query: 1 MYGKCGSLDDAKKVFKMM--PERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPN 58
MYGKC A KVF+ M R+ V+W S++ A AL+ M P
Sbjct: 114 MYGKCSDTLSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEM-------PK 166
Query: 59 LV--SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPAC-ARLQKLSLGKE 115
V +W+ +I G G E + + M +P+ T SS++ AC A + G+
Sbjct: 167 RVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRM 226
Query: 116 FHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGN 175
H + +NG+ S N ++ Y + G A++ + +VS N+II + G
Sbjct: 227 VHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGE 286
Query: 176 VAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFG 235
+A E+F HL ++ I++W +MI+GY N ++A F + +M+ G++ F +G
Sbjct: 287 TEKALEVF----HLAPEKNIVTWTTMITGYGRNGDGEQALRFFVE-MMKSGVDSDHFAYG 341
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
+VL AC+ + L GK IH I G Q +VG ALV +Y + D+ A AF +I N
Sbjct: 342 AVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANK 401
Query: 296 ENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG---- 351
+ + F + A++L+ M++ + PD T +L+ CS +E G
Sbjct: 402 DLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIF 461
Query: 352 -KQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHAR---LAYKRIST--PDLVSQNAML 405
V Y I D H+ T ++DM+ + G L A+ Y + T + S +L
Sbjct: 462 ESMVKDYRIPLEVD---HV-TCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLL 517
Query: 406 TAYAMHGHGKEG 417
A + H H + G
Sbjct: 518 GACSTHWHTELG 529
>gi|357516905|ref|XP_003628741.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522763|gb|AET03217.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 758
Score = 307 bits (787), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 178/604 (29%), Positives = 293/604 (48%), Gaps = 113/604 (18%)
Query: 30 VTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEG 89
+T C+ + A + +++ PN +W+A+ G+ QNG+ + + + +
Sbjct: 51 ITTCSRFKRIHHARKLFDKIPQ-----PNTATWNAMFRGYLQNGHHRDTVVLFGELNRIA 105
Query: 90 LEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSAL 149
PN T ++ +C +L+ + G+E H T++GF SN FV L+D+Y +
Sbjct: 106 GMPNCFTFPMIIKSCGKLEGVREGEEVHCCATKHGFKSNSFVATSLIDMYSK-------- 157
Query: 150 KIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNS 209
G V +A ++F +M +R ++ W ++I+GY
Sbjct: 158 -----------------------KGCVEDAYKVFGEMH----ERNVVVWTAIINGY---- 186
Query: 210 LYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVG 269
I C D+ S R+ L + D +
Sbjct: 187 -----------------------------ILCGDVVSGRR-------LFDLAPERDVVMW 210
Query: 270 GALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGF-----------------EPNVY 312
L+ Y +++ AA+ FD++ N + + +G+ E NV+
Sbjct: 211 SVLISGYIESKNMAAARELFDKMPNRDTMSWNAMLNGYAVNGEVEMFEKVFDEMPERNVF 270
Query: 313 TWNAM-------QLFSEMLSL--------DLTPDIYTVGIILSACSSLATMERGKQVHAY 357
+WN + LFSE L + P+ +T+ +LSACS L ++ GK VH Y
Sbjct: 271 SWNGLIGGYVKNGLFSETLESFKRMLVEGHVIPNDFTLVAVLSACSRLGALDMGKWVHVY 330
Query: 358 AIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEG 417
A GY ++ +G L+DMYAKCG +++A + + + D++S N ++ A+HGH +
Sbjct: 331 AESIGYKGNLFVGNVLIDMYAKCGVIENAVVVFNCLDRKDIISWNTIINGLAIHGHAPDA 390
Query: 418 IAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVD 476
+ F R+ + G PD ++F+ LSAC H G +K G +F M +Y + P ++HY CMVD
Sbjct: 391 LGMFDRMKSEGEEPDGVTFVGILSACTHMGLVKDGFLYFKSMVDHYSIVPQIEHYGCMVD 450
Query: 477 LLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGN 536
LL RAG L +A FI+K+P+ PD+V+W ALLG C + N+E ++A RLIELEPNN N
Sbjct: 451 LLGRAGLLDQALNFIRKMPIEPDAVIWAALLGACRLYKNVEIAELALQRLIELEPNNPAN 510
Query: 537 YVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEI 596
+VM++N++ GR D+AR + M+D K PGCS IE D + +F + D H +E I
Sbjct: 511 FVMVSNIYKDLGRSEDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHSETESI 570
Query: 597 YTII 600
Y ++
Sbjct: 571 YRVL 574
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 112/461 (24%), Positives = 195/461 (42%), Gaps = 104/461 (22%)
Query: 11 AKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFT 70
A+K+F +P+ + +WN A+ G+
Sbjct: 63 ARKLFDKIPQPNTATWN------------------------------------AMFRGYL 86
Query: 71 QNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPF 130
QNG+ + + + + PN T ++ +C +L+ + G+E H T++GF SN F
Sbjct: 87 QNGHHRDTVVLFGELNRIAGMPNCFTFPMIIKSCGKLEGVREGEEVHCCATKHGFKSNSF 146
Query: 131 VVNGLVDVYRR-------------------------------CGDMLSALKIFSKFSIKN 159
V L+D+Y + CGD++S ++F ++
Sbjct: 147 VATSLIDMYSKKGCVEDAYKVFGEMHERNVVVWTAIINGYILCGDVVSGRRLFDLAPERD 206
Query: 160 EVSCNTIIVGYCENGNVAEARELFDQMEHLGV---------------------------Q 192
V + +I GY E+ N+A ARELFD+M + +
Sbjct: 207 VVMWSVLISGYIESKNMAAARELFDKMPNRDTMSWNAMLNGYAVNGEVEMFEKVFDEMPE 266
Query: 193 RGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKE 252
R + SWN +I GYV N L+ E F+ +L+ + P FT +VL AC+ + +L GK
Sbjct: 267 RNVFSWNGLIGGYVKNGLFSETLESFKRMLVEGHVIPNDFTLVAVLSACSRLGALDMGKW 326
Query: 253 IHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVY 312
+H A ++G + + FVG L++MY + + A + F+ ++ + + +G + +
Sbjct: 327 VHVYAESIGYKGNLFVGNVLIDMYAKCGVIENAVVVFNCLDRKDIISWNTIINGLAIHGH 386
Query: 313 TWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG-----KQVHAYAIRCGYDSDV 367
+A+ +F M S PD T ILSAC+ + ++ G V Y+I +
Sbjct: 387 APDALGMFDRMKSEGEEPDGVTFVGILSACTHMGLVKDGFLYFKSMVDHYSIVPQIE--- 443
Query: 368 HIGTALVDMYAKCGSLKHARLAYKRIST-PDLVSQNAMLTA 407
H G +VD+ + G L A +++ PD V A+L A
Sbjct: 444 HYG-CMVDLLGRAGLLDQALNFIRKMPIEPDAVIWAALLGA 483
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 154/324 (47%), Gaps = 34/324 (10%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLD-------- 53
Y CG + +++F + PERD V W+ +++ + + A E ++M + D
Sbjct: 186 YILCGDVVSGRRLFDLAPERDVVMWSVLISGYIESKNMAAARELFDKMPNRDTMSWNAML 245
Query: 54 ----------------NETP--NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEG-LEPNA 94
+E P N+ SW+ +IGG+ +NG E + RM EG + PN
Sbjct: 246 NGYAVNGEVEMFEKVFDEMPERNVFSWNGLIGGYVKNGLFSETLESFKRMLVEGHVIPND 305
Query: 95 RTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSK 154
TL +VL AC+RL L +GK H Y G+ N FV N L+D+Y +CG + +A+ +F+
Sbjct: 306 FTLVAVLSACSRLGALDMGKWVHVYAESIGYKGNLFVGNVLIDMYAKCGVIENAVVVFNC 365
Query: 155 FSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEA 214
K+ +S NTII G +G+ +A +FD+M+ G + +++ ++S L +
Sbjct: 366 LDRKDIISWNTIINGLAIHGHAPDALGMFDRMKSEGEEPDGVTFVGILSACTHMGLVKDG 425
Query: 215 FSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAI--ALGLQSDTFVGGAL 272
F F+ ++ I P +G ++ R G AL + ++ D + AL
Sbjct: 426 FLYFKSMVDHYSIVPQIEHYGCMVDLLG-----RAGLLDQALNFIRKMPIEPDAVIWAAL 480
Query: 273 VEMYCRYQDLVAAQMAFDEIENIE 296
+ Y+++ A++A + +E
Sbjct: 481 LGACRLYKNVEIAELALQRLIELE 504
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 101/228 (44%), Gaps = 10/228 (4%)
Query: 339 LSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDL 398
++ S ER Q+ A + G + + + + ++ + HAR + +I P+
Sbjct: 16 ITLLRSCKNYERLHQIQAQIVTHGLEHNDFVAPNFITTCSRFKRIHHARKLFDKIPQPNT 75
Query: 399 VSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDL 458
+ NAM Y +GH ++ + F + P+ +F + +C ++ G E
Sbjct: 76 ATWNAMFRGYLQNGHHRDTVVLFGELNRIAGMPNCFTFPMIIKSCGKLEGVREGEEVHCC 135
Query: 459 MAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEF 518
+ K + T ++D+ S+ G + +AY+ ++ + V+W A++ G + G++
Sbjct: 136 ATKHGFKSNSFVATSLIDMYSKKGCVEDAYKVFGEM-HERNVVVWTAIINGYILCGDV-- 192
Query: 519 GQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQ---KMKDR 563
++ RL +L P + VM + L + ++A R+ KM +R
Sbjct: 193 --VSGRRLFDLAPER--DVVMWSVLISGYIESKNMAAARELFDKMPNR 236
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG +++A VF + +D +SWN+++ A +G +AL +RM S + E P+ V
Sbjct: 349 MYAKCGVIENAVVVFNCLDRKDIISWNTIINGLAIHGHAPDALGMFDRMKS-EGEEPDGV 407
Query: 61 SWSAVIGGFTQNG 73
++ ++ T G
Sbjct: 408 TFVGILSACTHMG 420
>gi|414885035|tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
Length = 824
Score = 307 bits (787), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 184/592 (31%), Positives = 287/592 (48%), Gaps = 89/592 (15%)
Query: 11 AKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFT 70
A+ F + PE+D VSWN ++ A NG + EA E + + D +SW+A++ G+
Sbjct: 219 ARHYFDLAPEKDAVSWNGMLAAYVRNGRIQEARELFDSRTEWD-----AISWNALMAGYV 273
Query: 71 QNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPF 130
Q EEA M +M P +S
Sbjct: 274 QRSQIEEAQKMFNKM------PQRDVVS-------------------------------- 295
Query: 131 VVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLG 190
N +V Y R GDM A ++F I++ + I+ GY +NG + EA+ +FD M
Sbjct: 296 -WNTMVSGYARRGDMAEARRLFDVAPIRDVFTWTAIVSGYAQNGMLEEAKRVFDAMP--- 351
Query: 191 VQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKG 250
+ +SWN+M++ YV + +EA +F + R+ ++ ++L A L +
Sbjct: 352 -DKNAVSWNAMMAAYVQRRMMEEAKELFDAMPCRN-----VASWNTMLTGYAQAGMLDEA 405
Query: 251 KEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPN 310
+ I + Q D A++ Y +Q+ F E
Sbjct: 406 RAI----FGMMPQKDAVSWAAMLAAY--------SQIGFSE------------------- 434
Query: 311 VYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIG 370
+QLF EM + +LS C+ +A +E G Q+H+ I+ GY +G
Sbjct: 435 ----ETLQLFKEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHSRLIKAGYGVGCFVG 490
Query: 371 TALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFR 430
AL+ MY KCGS++ A A++ + D+VS N M+ YA HG GKE + F + + +
Sbjct: 491 NALLAMYFKCGSMEEAHSAFEEMEERDVVSWNTMIAGYARHGFGKEALEVFDTMRKTSTK 550
Query: 431 PDHISFLSALSACVHAGSIKTG-SEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYE 489
PD I+ + L+AC H+G ++ G S F+ + + V +HYTCM+DLL RAG L EA
Sbjct: 551 PDDITLVGVLAACSHSGLVEKGISYFYSMHRDFGVATKPEHYTCMIDLLGRAGRLDEAVN 610
Query: 490 FIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGR 549
+K +P PDS MWGALLG H N E G+ AA+++ ELEP N G YV+L+N++A +G+
Sbjct: 611 LMKDMPFEPDSTMWGALLGASRIHRNSELGRNAAEKIFELEPENAGMYVLLSNIYASSGK 670
Query: 550 WSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
W D+ + R M +R + K PG SWIE ++++H F D H E+IY ++
Sbjct: 671 WRDVDKMRHIMHERGVKKVPGFSWIEVQNKVHTFSVGDSVHPEREDIYAFLE 722
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGS+++A F+ M ERD VSWN+++ A +G EALE + M + P+ +
Sbjct: 496 MYFKCGSMEEAHSAFEEMEERDVVSWNTMIAGYARHGFGKEALEVFDTMRKTSTK-PDDI 554
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQ 86
+ V+ + +G E+ I + M
Sbjct: 555 TLVGVLAACSHSGLVEKGISYFYSMH 580
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 60/144 (41%), Gaps = 9/144 (6%)
Query: 374 VDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDH 433
+ + + G + A + + + N ML YA +G + ++ FR I RPD
Sbjct: 114 ITAHMRAGRVPDAERLFAAMPRRSTSTYNTMLAGYAANGRLPQALSFFRSIP----RPDS 169
Query: 434 ISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKK 493
S+ + L A + S+ FD M VK S+ Y M+ + G + A +
Sbjct: 170 FSYNTLLHALGVSSSLADVRALFDEMP---VKDSVS-YNVMISSHANHGLVSLARHYFDL 225
Query: 494 IPMAPDSVMWGALLGGCVSHGNLE 517
P D+V W +L V +G ++
Sbjct: 226 AP-EKDAVSWNGMLAAYVRNGRIQ 248
>gi|15222917|ref|NP_175445.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213175|sp|Q9SX45.1|PPR75_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g50270
gi|5734776|gb|AAD50041.1|AC007980_6 Hypothetical protein [Arabidopsis thaliana]
gi|332194410|gb|AEE32531.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 596
Score = 307 bits (787), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 179/566 (31%), Positives = 296/566 (52%), Gaps = 70/566 (12%)
Query: 55 ETPNLVSWSAVIGGFTQNGYDEEAIGML-FR-MQAEGLEPNARTLSSVLPACARLQKLSL 112
+T ++ W ++IG F+ + L +R M+ G+ P+ T +L A +L+ S
Sbjct: 63 QTLSIQLWDSLIGHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAVFKLRD-SN 121
Query: 113 GKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCE 172
+FH +I + G S+PFV N L I GY
Sbjct: 122 PFQFHAHIVKFGLDSDPFVRNSL-------------------------------ISGYSS 150
Query: 173 NGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSF 232
+G A LFD E + +++W +MI G+V N EA F ++ + G+
Sbjct: 151 SGLFDFASRLFDGAE----DKDVVTWTAMIDGFVRNGSASEAMVYFVEM-KKTGVAANEM 205
Query: 233 TFGSVLIACADMNSLRKGKEIHALAIALG-LQSDTFVGGALVEMYCRYQDLVAAQMAFDE 291
T SVL A + +R G+ +H L + G ++ D F+G +LV+MY + AQ FDE
Sbjct: 206 TVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDE 265
Query: 292 IENIENLLGKMKEDGFEPNVYTWNA--------------MQLFSEMLSLDLTPDIYTVGI 337
+ + NV TW A M +F EML D+ P+ T+
Sbjct: 266 MPS--------------RNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSS 311
Query: 338 ILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPD 397
+LSAC+ + + RG++VH Y I+ + + GT L+D+Y KCG L+ A L ++R+ +
Sbjct: 312 VLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKN 371
Query: 398 LVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFF- 456
+ + AM+ +A HG+ ++ F +L+S P+ ++F++ LSAC H G ++ G F
Sbjct: 372 VYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFL 431
Query: 457 DLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNL 516
+ ++++P HY CMVDL R G L EA I+++PM P +V+WGAL G C+ H +
Sbjct: 432 SMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDY 491
Query: 517 EFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIED 576
E G+ AA R+I+L+P+++G Y +LANL++ + W ++AR R++MKD+++ KSPG SWIE
Sbjct: 492 ELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWIEV 551
Query: 577 RDEIHKFRA-SDRSHDRSEEIYTIID 601
+ ++ +F A D+ S+++Y +D
Sbjct: 552 KGKLCEFIAFDDKKPLESDDLYKTLD 577
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/410 (23%), Positives = 182/410 (44%), Gaps = 46/410 (11%)
Query: 27 NSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQ 86
NS+++ +++GL A + E ++V+W+A+I GF +NG EA+ M+
Sbjct: 142 NSLISGYSSSGLFDFASRLFD-----GAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMK 196
Query: 87 AEGLEPNARTLSSVLPACARLQKLSLGKEFHG-YITRNGFMSNPFVVNGLVDVYRRCGDM 145
G+ N T+ SVL A +++ + G+ HG Y+ + F+ + LVD+Y +C
Sbjct: 197 KTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCY 256
Query: 146 LSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGY 205
A K+F + +N V+ +I G Y
Sbjct: 257 DDAQKVFDEMPSRNVVTWTALIAG-----------------------------------Y 281
Query: 206 VDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSD 265
V + +D+ +F ++L D + P T SVL ACA + +L +G+ +H I ++ +
Sbjct: 282 VQSRCFDKGMLVFEEMLKSD-VAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEIN 340
Query: 266 TFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLS 325
T G L+++Y + L A + F+ + +GF + Y +A LF MLS
Sbjct: 341 TTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLS 400
Query: 326 LDLTPDIYTVGIILSACSSLATMERGKQVH-AYAIRCGYDSDVHIGTALVDMYAKCGSLK 384
++P+ T +LSAC+ +E G+++ + R + +VD++ + G L+
Sbjct: 401 SHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLE 460
Query: 385 HARLAYKRIST-PDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDH 433
A+ +R+ P V A+ + +H + G R++ +P H
Sbjct: 461 EAKALIERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIK--LQPSH 508
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 150/339 (44%), Gaps = 10/339 (2%)
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDE--AFSMFRDLLMRDGIEPTSFTFGS 236
AR L Q++ L +Q W+S+I + + +F +R + R+G+ P+ TF
Sbjct: 55 ARRLLCQLQTLSIQL----WDSLIGHFSGGITLNRRLSFLAYRHM-RRNGVIPSRHTFPP 109
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
+L A + + HA + GL SD FV +L+ Y A FD E+ +
Sbjct: 110 LLKAVFKLRD-SNPFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKD 168
Query: 297 NLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHA 356
+ DGF N AM F EM + + TV +L A + + G+ VH
Sbjct: 169 VVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHG 228
Query: 357 YAIRCG-YDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGK 415
+ G DV IG++LVDMY KC A+ + + + ++V+ A++ Y
Sbjct: 229 LYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFD 288
Query: 416 EGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMV 475
+G+ F +L S P+ + S LSAC H G++ G M ++ + T ++
Sbjct: 289 KGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLI 348
Query: 476 DLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
DL + G L EA +++ + W A++ G +HG
Sbjct: 349 DLYVKCGCLEEAILVFERL-HEKNVYTWTAMINGFAAHG 386
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 121/274 (44%), Gaps = 43/274 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKC DDA+KVF MP R N+V
Sbjct: 249 MYGKCSCYDDAQKVFDEMPSR------------------------------------NVV 272
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+A+I G+ Q+ ++ + + M + PN +TLSSVL ACA + L G+ H Y+
Sbjct: 273 TWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYM 332
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+N N L+D+Y +CG + A+ +F + KN + +I G+ +G +A
Sbjct: 333 IKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAF 392
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+LF M V +++ +++S L +E +F + R +EP + + A
Sbjct: 393 DLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHY-----A 447
Query: 241 CADMNSLRKG--KEIHALAIALGLQSDTFVGGAL 272
C RKG +E AL + ++ V GAL
Sbjct: 448 CMVDLFGRKGLLEEAKALIERMPMEPTNVVWGAL 481
>gi|224084249|ref|XP_002307242.1| predicted protein [Populus trichocarpa]
gi|222856691|gb|EEE94238.1| predicted protein [Populus trichocarpa]
Length = 561
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 186/584 (31%), Positives = 294/584 (50%), Gaps = 84/584 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY CG L+ A KVF + ++D V WNS++ +L NE
Sbjct: 54 MYSNCGDLESANKVFGCVVQKDAVLWNSMI------------------FGNLKNEKL--- 92
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
EE + + +M G+ P T S +L AC +L G+ H +
Sbjct: 93 ---------------EEGVLLFGKMVRHGIVPTEFTYSMILNACGKLGDCRWGQVIHAQV 137
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+++ + N L+D+Y CGD + +F+K EN +
Sbjct: 138 IVLNVLADLPLQNALLDMYCSCGDTETGFNVFNKI----------------ENPD----- 176
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
++SWNSMISGY +N +A ++F L+ +P +TF +V+ A
Sbjct: 177 --------------LVSWNSMISGYAENGEGADAMNLFLQLVGVFLPKPDEYTFAAVISA 222
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIEN------ 294
+ ++ GK +HA + +G + F+G L+ MY + D+ +A+ F+ IE
Sbjct: 223 TSAFSATCYGKPLHAQVLKVGSERSVFIGTTLLSMYLKNGDIESAEQVFNMIEGKDVVLW 282
Query: 295 IENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQV 354
E ++G + G E +A++LFS M D + + LSAC+ LAT+ +G+ +
Sbjct: 283 TEMIMGHSRLGGGE------SAIKLFSMMCHEGYKIDSFALSGALSACADLATLNQGEMI 336
Query: 355 HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHG 414
H ++ G D+++ + +LV MYAK G L AR + ++S PDL N+ML Y+ HG
Sbjct: 337 HTQTVKRGCDAEISVCGSLVHMYAKNGDLHAARSIFSQVSNPDLKCWNSMLGGYSQHGMA 396
Query: 415 KEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCM 474
+E + F +IL +G RPD ++FLS LSAC H+G ++ G + + DV P KHY+CM
Sbjct: 397 EEAMIIFAKILVNGQRPDQVTFLSLLSACSHSGLVEEGKLLWSHIKKNDVIPGPKHYSCM 456
Query: 475 VDLLSRAGELGEAYEFIKKIPMAPDSV-MWGALLGGCVSHGNLEFGQIAADRLIELEPNN 533
V LLSRAG L EA E I K + D + +W LL CV+ NL+ G AA+ +++LEP +
Sbjct: 457 VSLLSRAGLLDEAEELIIKSTYSKDHLELWRTLLSSCVNKRNLKIGVRAAEEILQLEPED 516
Query: 534 TGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDR 577
+ +++L+NL+A AGRW +A R+K+ + K PG SWIE +
Sbjct: 517 SATHILLSNLYAAAGRWEAVAEMRRKISGLMIEKDPGLSWIEGK 560
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 128/444 (28%), Positives = 201/444 (45%), Gaps = 38/444 (8%)
Query: 85 MQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGD 144
M +GL PN T SS L AC L+ +G HG ++GF ++ FV L+ +Y CGD
Sbjct: 1 MGTQGLTPNGSTFSSSLQACCLLEDWFMGSLIHGQSVKHGFFNDVFVQTSLLGMYSNCGD 60
Query: 145 MLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISG 204
+ SA K+F G V VQ+ + WNSMI G
Sbjct: 61 LESANKVF---------------------GCV--------------VQKDAVLWNSMIFG 85
Query: 205 YVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQS 264
+ N +E +F ++ R GI PT FT+ +L AC + R G+ IHA I L + +
Sbjct: 86 NLKNEKLEEGVLLFGKMV-RHGIVPTEFTYSMILNACGKLGDCRWGQVIHAQVIVLNVLA 144
Query: 265 DTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEML 324
D + AL++MYC D F++IEN + + G+ N +AM LF +++
Sbjct: 145 DLPLQNALLDMYCSCGDTETGFNVFNKIENPDLVSWNSMISGYAENGEGADAMNLFLQLV 204
Query: 325 SLDL-TPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSL 383
+ L PD YT ++SA S+ + GK +HA ++ G + V IGT L+ MY K G +
Sbjct: 205 GVFLPKPDEYTFAAVISATSAFSATCYGKPLHAQVLKVGSERSVFIGTTLLSMYLKNGDI 264
Query: 384 KHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSAC 443
+ A + I D+V M+ ++ G G+ I F + G++ D + ALSAC
Sbjct: 265 ESAEQVFNMIEGKDVVLWTEMIMGHSRLGGGESAIKLFSMMCHEGYKIDSFALSGALSAC 324
Query: 444 VHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMW 503
++ G + +V + ++ G+L A ++ PD W
Sbjct: 325 ADLATLNQGEMIHTQTVKRGCDAEISVCGSLVHMYAKNGDLHAARSIFSQVS-NPDLKCW 383
Query: 504 GALLGGCVSHGNLEFGQIAADRLI 527
++LGG HG E I +++
Sbjct: 384 NSMLGGYSQHGMAEEAMIIFAKIL 407
>gi|15228257|ref|NP_188283.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274288|sp|Q9LUS3.1|PP237_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g16610
gi|11994615|dbj|BAB02752.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332642322|gb|AEE75843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 654
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 186/578 (32%), Positives = 279/578 (48%), Gaps = 76/578 (13%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y KCG L+ A KVF MP+RD +V+
Sbjct: 148 YAKCGELEMAIKVFDEMPKRD------------------------------------MVA 171
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQ-AEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
W+A+I GF+ + + IG+ M+ +GL PN T+ + PA R L GK HGY
Sbjct: 172 WNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYC 231
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
TR GF ++ V G++DVY + ++ A ++F KNEV+
Sbjct: 232 TRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVT------------------ 273
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIE-PTSFTFGSVLI 239
W++MI GYV+N + EA +F +L+ D + T G +L+
Sbjct: 274 -----------------WSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILM 316
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
CA L G+ +H A+ G D V ++ Y +Y L A F EI + +
Sbjct: 317 GCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVIS 376
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
G N + +LF EM + + PDI T+ +L+ACS LA + G H Y +
Sbjct: 377 YNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCV 436
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
GY + I AL+DMY KCG L A+ + + D+VS N ML + +HG GKE ++
Sbjct: 437 VHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALS 496
Query: 420 HFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY--YDVKPSLKHYTCMVDL 477
F + +G PD ++ L+ LSAC H+G + G + F+ M+ ++V P + HY CM DL
Sbjct: 497 LFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDL 556
Query: 478 LSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNY 537
L+RAG L EAY+F+ K+P PD + G LL C ++ N E G + ++ L T +
Sbjct: 557 LARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKKMQSL-GETTESL 615
Query: 538 VMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIE 575
V+L+N ++ A RW D AR R K R + K+PG SW++
Sbjct: 616 VLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWVD 653
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 115/461 (24%), Positives = 208/461 (45%), Gaps = 42/461 (9%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
N ++W +I + N + E+A+ + ++M G+ P T VL ACA L+ + GK H
Sbjct: 67 NPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIH 126
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
++ + F ++ +V LVD Y +CG++ A+K+
Sbjct: 127 SHVNCSDFATDMYVCTALVDFYAKCGELEMAIKV-------------------------- 160
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
FD+M +R +++WN+MISG+ + + +F D+ DG+ P T +
Sbjct: 161 -----FDEMP----KRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGM 211
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
A +LR+GK +H +G +D V ++++Y + + ++ A+ FD
Sbjct: 212 FPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNE 271
Query: 298 LLGKMKEDGFEPNVYTWNAMQLFSEMLSLD----LTPDIYTVGIILSACSSLATMERGKQ 353
+ G+ N A ++F +ML D +TP +G+IL C+ + G+
Sbjct: 272 VTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTP--VAIGLILMGCARFGDLSGGRC 329
Query: 354 VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGH 413
VH YA++ G+ D+ + ++ YAK GSL A + I D++S N+++T ++
Sbjct: 330 VHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCR 389
Query: 414 GKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTC 473
+E F + SG RPD + L L+AC H ++ GS + +
Sbjct: 390 PEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNA 449
Query: 474 MVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
++D+ ++ G+L A + D V W +L G HG
Sbjct: 450 LMDMYTKCGKLDVAKRVFDTMH-KRDIVSWNTMLFGFGIHG 489
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 148/319 (46%), Gaps = 17/319 (5%)
Query: 234 FGSVLIACADMNSLRKGKEIHA--LAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDE 291
F S+L C +L G+ IH L +L L S T + L +Y ++ A+ FDE
Sbjct: 2 FLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVN-LTRLYASCNEVELARHVFDE 60
Query: 292 IEN--IENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATME 349
I + I + + + N + A+ L+ +ML+ + P YT +L AC+ L ++
Sbjct: 61 IPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAID 120
Query: 350 RGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYA 409
GK +H++ + +D+++ TALVD YAKCG L+ A + + D+V+ NAM++ ++
Sbjct: 121 DGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFS 180
Query: 410 MHGHGKEGIAHF---RRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKP 466
+H + I F RRI G P+ + + A AG+++ G
Sbjct: 181 LHCCLTDVIGLFLDMRRI--DGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSN 238
Query: 467 SLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSH------GNLEFGQ 520
L T ++D+ +++ + A + + + V W A++GG V + G + F
Sbjct: 239 DLVVKTGILDVYAKSKCIIYARR-VFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQM 297
Query: 521 IAADRLIELEPNNTGNYVM 539
+ D + + P G +M
Sbjct: 298 LVNDNVAMVTPVAIGLILM 316
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 81/193 (41%), Gaps = 39/193 (20%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG LD AK+VF M +RD VSWN+++
Sbjct: 453 MYTKCGKLDVAKRVFDTMHKRDIVSWNTMLF----------------------------- 483
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
GF +G +EA+ + MQ G+ P+ TL ++L AC+ + GK+ +
Sbjct: 484 -------GFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSM 536
Query: 121 TRNGFMSNPFV--VNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
+R F P + N + D+ R G + A +K + ++ ++ C AE
Sbjct: 537 SRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAE 596
Query: 179 -ARELFDQMEHLG 190
E+ +M+ LG
Sbjct: 597 LGNEVSKKMQSLG 609
>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1611
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 177/603 (29%), Positives = 305/603 (50%), Gaps = 74/603 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K GS+ A+ VF M E D L+
Sbjct: 979 MYVKAGSVSRARSVFGQMNEVD------------------------------------LI 1002
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQK-LSLGKEFHGY 119
SW+ +I G T +G +E ++GM + + L P+ T++SVL AC+ L+ L + H
Sbjct: 1003 SWNTMISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACSSLEGGYYLATQIHAC 1062
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ G + + FV L+DVY + G M A +F
Sbjct: 1063 AMKAGVVLDSFVSTALIDVYSKRGKMEEAEFLFVN------------------------- 1097
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
++ FD + SWN+++ GY+ + + +A ++ L+ G T +
Sbjct: 1098 QDGFD----------LASWNAIMHGYIVSGDFPKALRLYI-LMQESGERSDQITLVNAAK 1146
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
A + L++GK+IHA+ + G D FV +++MY + ++ +A+ F EI + +++
Sbjct: 1147 AAGGLVGLKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGEMESARRVFSEIPSPDDVA 1206
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
G N +A+ + +M + PD YT ++ ACS L +E+G+Q+HA +
Sbjct: 1207 WTTMISGCVENGQEEHALFTYHQMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANIV 1266
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
+ D + T+LVDMYAKCG+++ AR +KR +T + S NAM+ A HG+ KE +
Sbjct: 1267 KLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTRRIASWNAMIVGLAQHGNAKEALQ 1326
Query: 420 HFRRILASGFRPDHISFLSALSACVHAGSIKTGSE-FFDLMAYYDVKPSLKHYTCMVDLL 478
F+ + + G PD ++F+ LSAC H+G + E F+ + Y ++P ++HY+C+VD L
Sbjct: 1327 FFKYMKSRGVMPDRVTFIGVLSACSHSGLVSEAYENFYSMQKNYGIEPEIEHYSCLVDAL 1386
Query: 479 SRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYV 538
SRAG + EA + I +P + M+ LL C + E G+ A++L+ LEP+++ YV
Sbjct: 1387 SRAGRIEEAEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLLALEPSDSAAYV 1446
Query: 539 MLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYT 598
+L+N++A A +W ++A R M+ + K PG SW++ ++++H F A DRSH+ ++ IY
Sbjct: 1447 LLSNVYAAANQWENVASARNMMRKVNVKKDPGFSWVDLKNKVHLFVAGDRSHEETDVIYN 1506
Query: 599 IID 601
++
Sbjct: 1507 KVE 1509
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 139/571 (24%), Positives = 242/571 (42%), Gaps = 110/571 (19%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWN--------------------------------- 27
+Y K G + +A+ +F M RD V WN
Sbjct: 804 IYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTCLEYEAMLLFSEFHRTGFRPDDVT 863
Query: 28 ----SVVTACAANGLVLEALECL-ERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGML 82
S V C N L L+ + ++ D++ +++ W+ + F Q G EA+
Sbjct: 864 LRTLSRVVKCKKNILELKQFKAYATKLFMYDDDGSDVIVWNKALSRFLQRGEAWEAVDCF 923
Query: 83 FRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRC 142
M + + T +L A L L LGK+ HG + R+G V N L+++Y +
Sbjct: 924 VDMINSRVACDGLTFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVKA 983
Query: 143 GDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMI 202
G +V+ AR +F QM + +ISWN+MI
Sbjct: 984 G-------------------------------SVSRARSVFGQMNEVD----LISWNTMI 1008
Query: 203 SGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKG----KEIHALAI 258
SG + L + + MF LL RD + P FT SVL AC+ SL G +IHA A+
Sbjct: 1009 SGCTLSGLEECSVGMFVHLL-RDSLLPDQFTVASVLRACS---SLEGGYYLATQIHACAM 1064
Query: 259 ALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWN--- 315
G+ D+FV AL+++Y + + A+ F + +DGF+ + +WN
Sbjct: 1065 KAGVVLDSFVSTALIDVYSKRGKMEEAEFLF------------VNQDGFD--LASWNAIM 1110
Query: 316 -----------AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYD 364
A++L+ M D T+ A L +++GKQ+HA ++ G++
Sbjct: 1111 HGYIVSGDFPKALRLYILMQESGERSDQITLVNAAKAAGGLVGLKQGKQIHAVVVKRGFN 1170
Query: 365 SDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRI 424
D+ + + ++DMY KCG ++ AR + I +PD V+ M++ +G + + + ++
Sbjct: 1171 LDLFVTSGVLDMYLKCGEMESARRVFSEIPSPDDVAWTTMISGCVENGQEEHALFTYHQM 1230
Query: 425 LASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGEL 484
S +PD +F + + AC +++ G + + + T +VD+ ++ G +
Sbjct: 1231 RLSKVQPDEYTFATLVKACSLLTALEQGRQIHANIVKLNCAFDPFVMTSLVDMYAKCGNI 1290
Query: 485 GEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
+A K+ + W A++ G HGN
Sbjct: 1291 EDARGLFKRTNTRRIA-SWNAMIVGLAQHGN 1320
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 134/575 (23%), Positives = 231/575 (40%), Gaps = 79/575 (13%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGSL A+K+F P+ + +LV
Sbjct: 700 MYAKCGSLSSARKLFDTTPDTN----------------------------------RDLV 725
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNAR-TLSSVLPACARLQKLSLGKEFHGY 119
+W+A++ + LFR+ + R TL+ V C S + HGY
Sbjct: 726 TWNAILSALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSASESLHGY 785
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ G + FV LV++Y + G + A +F ++++ V N ++ Y + EA
Sbjct: 786 AVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTCLEYEA 845
Query: 180 RELFDQMEHLGVQ---------------------------------------RGIISWNS 200
LF + G + +I WN
Sbjct: 846 MLLFSEFHRTGFRPDDVTLRTLSRVVKCKKNILELKQFKAYATKLFMYDDDGSDVIVWNK 905
Query: 201 MISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIAL 260
+S ++ EA F D++ + TF +L A +N L GK+IH + +
Sbjct: 906 ALSRFLQRGEAWEAVDCFVDMI-NSRVACDGLTFVVMLTVVAGLNCLELGKQIHGIVMRS 964
Query: 261 GLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLF 320
GL VG L+ MY + + A+ F ++ ++ + G + ++ +F
Sbjct: 965 GLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSGLEECSVGMF 1024
Query: 321 SEMLSLDLTPDIYTVGIILSACSSL-ATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAK 379
+L L PD +TV +L ACSSL Q+HA A++ G D + TAL+D+Y+K
Sbjct: 1025 VHLLRDSLLPDQFTVASVLRACSSLEGGYYLATQIHACAMKAGVVLDSFVSTALIDVYSK 1084
Query: 380 CGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSA 439
G ++ A + DL S NA++ Y + G + + + + SG R D I+ ++A
Sbjct: 1085 RGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQESGERSDQITLVNA 1144
Query: 440 LSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPD 499
A +K G + ++ L + ++D+ + GE+ A +IP +PD
Sbjct: 1145 AKAAGGLVGLKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGEMESARRVFSEIP-SPD 1203
Query: 500 SVMWGALLGGCVSHGNLEFGQIAAD--RLIELEPN 532
V W ++ GCV +G E RL +++P+
Sbjct: 1204 DVAWTTMISGCVENGQEEHALFTYHQMRLSKVQPD 1238
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 101/438 (23%), Positives = 171/438 (39%), Gaps = 75/438 (17%)
Query: 87 AEGLEPNARTLSSVLPACARLQK-------LSLGKEFHGYITRNGFMSNPFVVNGLVDVY 139
A L P A + S LP C + + LSLGK H I +G + FV N L+ +Y
Sbjct: 643 ANPLTPRAHLIHS-LPQCFSILRQAIAASDLSLGKRAHARILTSGHHPDRFVTNNLITMY 701
Query: 140 RRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWN 199
+CG + S AR+LFD R +++WN
Sbjct: 702 AKCGSLSS-------------------------------ARKLFDTTP--DTNRDLVTWN 728
Query: 200 SMISG---YVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHAL 256
+++S + D S + F +FR LL R + T T V C S + +H
Sbjct: 729 AILSALAAHADKS--HDGFHLFR-LLRRSVVSTTRHTLAPVFKMCLLSASPSASESLHGY 785
Query: 257 AIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNA 316
A+ +GLQ D FV GALV +Y ++ + A++ FD + + +L + + + A
Sbjct: 786 AVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTCLEYEA 845
Query: 317 MQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDM 376
M LFSE PD T+ + + KQ AYA + + M
Sbjct: 846 MLLFSEFHRTGFRPDDVTLRTLSRVVKCKKNILELKQFKAYATK-------------LFM 892
Query: 377 YAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISF 436
Y GS D++ N L+ + G E + F ++ S D ++F
Sbjct: 893 YDDDGS--------------DVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTF 938
Query: 437 LSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPM 496
+ L+ ++ G + ++ + + C++++ +AG + A ++
Sbjct: 939 VVMLTVVAGLNCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNE 998
Query: 497 APDSVMWGALLGGCVSHG 514
D + W ++ GC G
Sbjct: 999 V-DLISWNTMISGCTLSG 1015
>gi|218186186|gb|EEC68613.1| hypothetical protein OsI_36980 [Oryza sativa Indica Group]
Length = 981
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 202/747 (27%), Positives = 337/747 (45%), Gaps = 160/747 (21%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERM----------- 49
+YG G + DA+++F MPER+ VSW +++ A ++NG + E L +M
Sbjct: 88 LYGSRGIVSDARRLFWEMPERNVVSWTALMVALSSNGYLEETLRAYRQMRREGVPCNANA 147
Query: 50 --------SSLDNETPNL------------------------------------------ 59
SL+NE P L
Sbjct: 148 FATVVSLCGSLENEVPGLQVASHVIVSGLQNQVSVANSLITMFGNLGRVQDAEKLFDRME 207
Query: 60 ----VSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKE 115
+S +A+I ++ G + + M+ GL P+A TL S++ CA S G
Sbjct: 208 EHDTISRNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASADHFSHGSG 267
Query: 116 FHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGN 175
H R+ S+ V+N LV++Y G + A +F S ++ +S NT+I Y +N N
Sbjct: 268 IHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCN 327
Query: 176 VAEARELFDQMEH-----------------------------------LGVQRGIISWNS 200
+A + Q+ H L +QR ++ NS
Sbjct: 328 STDALKTLGQLFHTNEIPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNS 387
Query: 201 MISGYVDNSLYDEAFSMFRDLLMRD------------------------------GIEPT 230
+I+ Y + ++A +F+ + D GI+P
Sbjct: 388 LITMYGKCNSMEDAEKVFQSMPTHDVVSYNVLIGGYAVLEDGTKAMQVFSWIRSAGIKPN 447
Query: 231 SFTFGSVLIACADMNSLRK-GKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAF 289
T ++ + N L G+ +HA I G SD +V +L+ MY + +L ++ F
Sbjct: 448 YITMINIHGSFTSSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIF 507
Query: 290 DEIENIENLLGKMKEDGFEPNVYTWNA--------------MQLFSEMLSLDLTPDIYTV 335
+ I N N+ +WNA ++LF +M D +
Sbjct: 508 NSITN--------------KNIVSWNAIIAANAQLGHGEEALKLFIDMQHAGNKLDRVCL 553
Query: 336 GIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST 395
LS+C+SLA++E G Q+H ++ G DSD ++ A +DMY KCG + +
Sbjct: 554 AECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMNEMLQMVPDQAI 613
Query: 396 PDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEF 455
N +++ YA +G+ KE F++++A G +PD+++F++ LSAC HAG + G ++
Sbjct: 614 RPQQCWNTLISGYAKYGYFKEAEETFKQMVAMGRKPDYVTFVALLSACSHAGLVDKGIDY 673
Query: 456 FDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
++ MA + V P +KH C+VDLL R G EA FI+++P+ P+ ++W +LL +H
Sbjct: 674 YNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAERFIEEMPVLPNDLIWRSLLSSSRTHK 733
Query: 515 NLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWI 574
NLE G+ AA +L+EL+P + YV+L+NL+A RW D+ + R MK ++K P CSW+
Sbjct: 734 NLEIGRKAAKKLLELDPFDDSAYVLLSNLYATNARWVDVDKLRSHMKTININKRPACSWL 793
Query: 575 EDRDEIHKFRASDRSHDRSEEIYTIID 601
+ ++E+ F DR H +E+IY +D
Sbjct: 794 KLKNEVSTFGIGDRGHKHAEKIYAKLD 820
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/461 (22%), Positives = 200/461 (43%), Gaps = 42/461 (9%)
Query: 52 LDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQK-- 109
+ + TP+ +W + G + G D A +L M+ G+ + L+S++ AC R +
Sbjct: 1 MPDRTPS--TWYTAVSGCVRCGRDVAAFELLRGMRERGVPLSGFALASLVTACERRGRDE 58
Query: 110 -LSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIV 168
++ G H R G M N ++ L+ +Y
Sbjct: 59 GIACGAAIHALTHRAGLMGNVYIGTALLHLYG---------------------------- 90
Query: 169 GYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIE 228
G V++AR LF +M +R ++SW +++ N +E +R + R+G+
Sbjct: 91 ---SRGIVSDARRLFWEMP----ERNVVSWTALMVALSSNGYLEETLRAYRQM-RREGVP 142
Query: 229 PTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMA 288
+ F +V+ C + + G ++ + I GLQ+ V +L+ M+ + A+
Sbjct: 143 CNANAFATVVSLCGSLENEVPGLQVASHVIVSGLQNQVSVANSLITMFGNLGRVQDAEKL 202
Query: 289 FDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATM 348
FD +E + + + +FS+M L PD T+ ++S C+S
Sbjct: 203 FDRMEEHDTISRNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASADHF 262
Query: 349 ERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAY 408
G +H+ +R DS V + ALV+MY+ G L A + +S DL+S N M+++Y
Sbjct: 263 SHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSY 322
Query: 409 AMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSL 468
+ + + + ++ + P+H++F SAL AC G++ G ++ ++ +L
Sbjct: 323 VQNCNSTDALKTLGQLFHTNEIPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNL 382
Query: 469 KHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
++ + + + +A + + +P D V + L+GG
Sbjct: 383 LVGNSLITMYGKCNSMEDAEKVFQSMP-THDVVSYNVLIGG 422
>gi|297742233|emb|CBI34382.3| unnamed protein product [Vitis vinifera]
Length = 705
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 193/643 (30%), Positives = 312/643 (48%), Gaps = 80/643 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG ++DA K+F MP++ +V
Sbjct: 86 MYAKCGRIEDAAKLFDHMPDK------------------------------------TVV 109
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW++++ G Q G +E I + +RM E L+PN TL+ +L ACA+ + L L + H +I
Sbjct: 110 SWTSMMSGHCQRGAFDEVISIFWRM-LETLQPNEYTLAVILQACAQKRDLKLVQLIHCHI 168
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ GF+ + F+ N L+D Y + G +++A K+ + ++ VS ++I G NG V +A
Sbjct: 169 IKTGFVMDAFLQNSLIDGYTKSGTLVAAEKLMKRLICRDVVSWTSVISGCVLNGMVEKAL 228
Query: 181 ELFDQMEHLGVQRGIIS----------------------------W-------NSMISGY 205
F +M+ GV ++ W NS++ Y
Sbjct: 229 LFFFEMQEDGVSPNTVTILSILQACSLINEWQVFQWVHGLVMKAEWRENVFVMNSLVEMY 288
Query: 206 VDNSLYDEAFSMFRDLLMR-DGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQS 264
N + E F +F + DG ++ T ++L C+ L+ G++IH I G
Sbjct: 289 SINGYFKEGFQIFCNFCFEGDGQYLSTETIATLLQGCSHSKCLKLGEQIHGYQIKHGFFP 348
Query: 265 DTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEML 324
T V +L+ MY + AA F ++ + + ++ A+ L SE+
Sbjct: 349 CTIVENSLIYMYAENERDDAAFQLFRKMSCRDIVSWNTMISSLVKGSSSYQALMLLSEVH 408
Query: 325 SLD----LTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKC 380
S + PD T+ + ACSSLA+++ G+ +H Y R G D+ + +LVDMY KC
Sbjct: 409 SNGGSDMIYPDFVTILASIQACSSLASLQLGQVIHGYITRAGLICDIFVQNSLVDMYGKC 468
Query: 381 GSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASG-FRPDHISFLSA 439
G L A + + DL S N+++ AY ++G+G + F+++ +G RP+ I+F +
Sbjct: 469 GRLHLAEKVSEEMPVRDLGSWNSLIAAYGINGNGISALNVFKQLKNTGAHRPNAITFTNI 528
Query: 440 LSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAP 498
LSAC HAG + G E F M Y ++P ++H+ CMVDLL RAG L EA FI+K+P P
Sbjct: 529 LSACAHAGLVAEGFEIFKSMKREYSLEPRIEHFACMVDLLGRAGRLEEAEAFIQKMPFEP 588
Query: 499 DSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQ 558
+WGALLGGC GNL+ + A +L LEP + V L+N++A +W D A+ R
Sbjct: 589 GPEVWGALLGGCGLFGNLDIAERVAKKLYILEPKSRAWRVALSNVYASVNKWEDAAKVRA 648
Query: 559 KM-KDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTII 600
+M + + K G S +E R + +F D H + +Y ++
Sbjct: 649 EMRRSEELQKEGGWSSVEVRGQEFRFMVGDTMHPEARMVYAVL 691
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 110/508 (21%), Positives = 195/508 (38%), Gaps = 124/508 (24%)
Query: 92 PNARTLSS------VLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDM 145
P+ TLS VL +CA + L LG H I ++G +N FV N L+D+Y +CG +
Sbjct: 34 PHIHTLSDSLTAVRVLSSCAANRDLRLGSCIHTNILKSGLHTNVFVANSLMDMYAKCGRI 93
Query: 146 LSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGY 205
A K+F K VS +++ G+C+ G
Sbjct: 94 EDAAKLFDHMPDKTVVSWTSMMSGHCQRGA------------------------------ 123
Query: 206 VDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSD 265
+DE S+F +L + ++P +T +L ACA L+ + IH I G D
Sbjct: 124 -----FDEVISIFWRML--ETLQPNEYTLAVILQACAQKRDLKLVQLIHCHIIKTGFVMD 176
Query: 266 TFVGGALVEMYCRYQDLVAAQMAFDE---------------------IENIENLLGKMKE 304
F+ +L++ Y + LVAA+ +E +M+E
Sbjct: 177 AFLQNSLIDGYTKSGTLVAAEKLMKRLICRDVVSWTSVISGCVLNGMVEKALLFFFEMQE 236
Query: 305 DGFEPNVYT-------------WNAMQL-------------------FSEMLSLD----- 327
DG PN T W Q EM S++
Sbjct: 237 DGVSPNTVTILSILQACSLINEWQVFQWVHGLVMKAEWRENVFVMNSLVEMYSINGYFKE 296
Query: 328 ----------------LTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGT 371
L+ + T+ +L CS ++ G+Q+H Y I+ G+ +
Sbjct: 297 GFQIFCNFCFEGDGQYLSTE--TIATLLQGCSHSKCLKLGEQIHGYQIKHGFFPCTIVEN 354
Query: 372 ALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASG--- 428
+L+ MYA+ A ++++S D+VS N M+++ + + + ++G
Sbjct: 355 SLIYMYAENERDDAAFQLFRKMSCRDIVSWNTMISSLVKGSSSYQALMLLSEVHSNGGSD 414
Query: 429 -FRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEA 487
PD ++ L+++ AC S++ G + + + +VD+ + G L A
Sbjct: 415 MIYPDFVTILASIQACSSLASLQLGQVIHGYITRAGLICDIFVQNSLVDMYGKCGRLHLA 474
Query: 488 YEFIKKIPMAPDSVMWGALLGGCVSHGN 515
+ +++P+ D W +L+ +GN
Sbjct: 475 EKVSEEMPVR-DLGSWNSLIAAYGINGN 501
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 132/308 (42%), Gaps = 32/308 (10%)
Query: 231 SFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFD 290
S T VL +CA LR G IH + GL ++ FV +L++MY + + A FD
Sbjct: 42 SLTAVRVLSSCAANRDLRLGSCIHTNILKSGLHTNVFVANSLMDMYAKCGRIEDAAKLFD 101
Query: 291 EIENIENLLGKMKEDGFEPNVYTWNAMQ-------LFSEMLSL------DLTPDIYTVGI 337
+ + V +W +M F E++S+ L P+ YT+ +
Sbjct: 102 HMP--------------DKTVVSWTSMMSGHCQRGAFDEVISIFWRMLETLQPNEYTLAV 147
Query: 338 ILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPD 397
IL AC+ ++ + +H + I+ G+ D + +L+D Y K G+L A KR+ D
Sbjct: 148 ILQACAQKRDLKLVQLIHCHIIKTGFVMDAFLQNSLIDGYTKSGTLVAAEKLMKRLICRD 207
Query: 398 LVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFD 457
+VS ++++ ++G ++ + F + G P+ ++ LS L AC +
Sbjct: 208 VVSWTSVISGCVLNGMVEKALLFFFEMQEDGVSPNTVTILSILQACSLINEWQVFQWVHG 267
Query: 458 LMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPD-----SVMWGALLGGCVS 512
L+ + + ++ +V++ S G E ++ D + LL GC
Sbjct: 268 LVMKAEWRENVFVMNSLVEMYSINGYFKEGFQIFCNFCFEGDGQYLSTETIATLLQGCSH 327
Query: 513 HGNLEFGQ 520
L+ G+
Sbjct: 328 SKCLKLGE 335
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 101/208 (48%), Gaps = 30/208 (14%)
Query: 327 DLTPDIYTVG------IILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKC 380
D P I+T+ +LS+C++ + G +H ++ G ++V + +L+DMYAKC
Sbjct: 31 DKYPHIHTLSDSLTAVRVLSSCAANRDLRLGSCIHTNILKSGLHTNVFVANSLMDMYAKC 90
Query: 381 GSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSAL 440
G ++ A + + +VS +M++ + G E I+ F R+L + +P+ + L
Sbjct: 91 GRIEDAAKLFDHMPDKTVVSWTSMMSGHCQRGAFDEVISIFWRMLET-LQPNEYTLAVIL 149
Query: 441 SAC-----------VHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYE 489
AC +H IKTG F + A+ ++D +++G L A +
Sbjct: 150 QACAQKRDLKLVQLIHCHIIKTG---FVMDAFLQ--------NSLIDGYTKSGTLVAAEK 198
Query: 490 FIKKIPMAPDSVMWGALLGGCVSHGNLE 517
+K++ + D V W +++ GCV +G +E
Sbjct: 199 LMKRL-ICRDVVSWTSVISGCVLNGMVE 225
>gi|297834550|ref|XP_002885157.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330997|gb|EFH61416.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 655
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 188/578 (32%), Positives = 280/578 (48%), Gaps = 76/578 (13%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y KCG LD A KVF MP+RD +V+
Sbjct: 148 YAKCGELDMAIKVFDEMPKRD------------------------------------IVA 171
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQ-AEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
W+A+I GF+ + + IG+ M+ ++ L PN T+ + PA R L GK HGY
Sbjct: 172 WNAMISGFSLHCCLTDVIGLFLDMRRSDCLSPNLSTIVGMFPALGRAGALREGKAVHGYC 231
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
TR GF ++ V G++DVY + ++ A ++F KNEV+
Sbjct: 232 TRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDSDFKKNEVT------------------ 273
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMR-DGIEPTSFTFGSVLI 239
W++MI GYV+N + EA +F +L+ D T G +L+
Sbjct: 274 -----------------WSAMIGGYVENEMIKEAGEVFLQMLVNADMAMVTPVAIGLILM 316
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
CA L G+ +H AI G D VG ++ Y +Y L A F EI + +
Sbjct: 317 GCARFGDLSGGRCVHCYAIKAGFILDLTVGNTVISFYAKYGSLCDAFRQFTEIGLKDIVS 376
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
G N + +LF +M S + PDI T+ IL+ACS+LA + G H Y +
Sbjct: 377 YNSLISGCVENCRAEESFRLFHQMKSSGIRPDITTLLGILTACSNLAALGHGSSCHGYCV 436
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
GY + I AL+DMY KCG L A+ + + D+VS N ML + +HG GKE ++
Sbjct: 437 VNGYAVNTSICNALMDMYTKCGKLYVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALS 496
Query: 420 HFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY--YDVKPSLKHYTCMVDL 477
F + +G PD ++ L+ LSAC H+G + G + F+ M+ ++V P L HY CM DL
Sbjct: 497 LFNSMQDTGVHPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRLDHYNCMTDL 556
Query: 478 LSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNY 537
L+RAG L EAY+F+ K+P PD + G LL C ++ N+E G + ++ L T +
Sbjct: 557 LARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNVELGNEVSKKMQSL-GETTESL 615
Query: 538 VMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIE 575
V+L+N ++ A RW D A+ R K + K+PG SW++
Sbjct: 616 VLLSNTYSAAERWEDAAKIRMTQKKSGLLKTPGYSWVD 653
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 120/463 (25%), Positives = 217/463 (46%), Gaps = 46/463 (9%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFH 117
N ++W +I + NG+ E+A+ + ++M G+ P T VL ACA L+ + GK H
Sbjct: 67 NPIAWDLMIRAYVSNGFAEKALDLYYKMLNSGVRPTKFTYPFVLKACAGLRAIEDGKLIH 126
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVA 177
++ + F ++ +V LVD Y +CG++ A+K+
Sbjct: 127 SHVKCSNFAADMYVCTALVDFYAKCGELDMAIKV-------------------------- 160
Query: 178 EARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
FD+M +R I++WN+MISG+ + + +F D+ D + P T +
Sbjct: 161 -----FDEMP----KRDIVAWNAMISGFSLHCCLTDVIGLFLDMRRSDCLSPNLSTIVGM 211
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
A +LR+GK +H +G +D V ++++Y + + ++ A+ FD
Sbjct: 212 FPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDSDFKKNE 271
Query: 298 LLGKMKEDGFEPNVYTWNAMQLFSEML-SLDL---TPDIYTVGIILSACSSLATMERGKQ 353
+ G+ N A ++F +ML + D+ TP +G+IL C+ + G+
Sbjct: 272 VTWSAMIGGYVENEMIKEAGEVFLQMLVNADMAMVTP--VAIGLILMGCARFGDLSGGRC 329
Query: 354 VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGH 413
VH YAI+ G+ D+ +G ++ YAK GSL A + I D+VS N++++ +
Sbjct: 330 VHCYAIKAGFILDLTVGNTVISFYAKYGSLCDAFRQFTEIGLKDIVSYNSLISGCVENCR 389
Query: 414 GKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEF--FDLMAYYDVKPSLKHY 471
+E F ++ +SG RPD + L L+AC + ++ GS + ++ Y V S+ +
Sbjct: 390 AEESFRLFHQMKSSGIRPDITTLLGILTACSNLAALGHGSSCHGYCVVNGYAVNTSICN- 448
Query: 472 TCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
++D+ ++ G+L A + D V W +L G HG
Sbjct: 449 -ALMDMYTKCGKLYVAKRVFDTMH-KRDIVSWNTMLFGFGIHG 489
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 139/300 (46%), Gaps = 8/300 (2%)
Query: 234 FGSVLIACADMNSLRKGKEIHA--LAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDE 291
F +L +C +L G+ IH L +L L S T + L +Y ++ A+ FDE
Sbjct: 2 FLRLLESCIRSRNLILGQIIHQHLLKRSLTLSSSTVLVN-LTRLYASCNEVELARHVFDE 60
Query: 292 IEN--IENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATME 349
I + I + + + N + A+ L+ +ML+ + P +T +L AC+ L +E
Sbjct: 61 IPHPRINPIAWDLMIRAYVSNGFAEKALDLYYKMLNSGVRPTKFTYPFVLKACAGLRAIE 120
Query: 350 RGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYA 409
GK +H++ + +D+++ TALVD YAKCG L A + + D+V+ NAM++ ++
Sbjct: 121 DGKLIHSHVKCSNFAADMYVCTALVDFYAKCGELDMAIKVFDEMPKRDIVAWNAMISGFS 180
Query: 410 MHGHGKEGIAHFRRILASG-FRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSL 468
+H + I F + S P+ + + A AG+++ G L
Sbjct: 181 LHCCLTDVIGLFLDMRRSDCLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDL 240
Query: 469 KHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNL-EFGQIAADRLI 527
T ++D+ +++ + A + V W A++GG V + + E G++ L+
Sbjct: 241 VVKTGILDVYAKSKCIIYARRVFDS-DFKKNEVTWSAMIGGYVENEMIKEAGEVFLQMLV 299
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 80/193 (41%), Gaps = 39/193 (20%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG L AK+VF M +RD VSWN+++
Sbjct: 453 MYTKCGKLYVAKRVFDTMHKRDIVSWNTMLF----------------------------- 483
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
GF +G +EA+ + MQ G+ P+ TL ++L AC+ + GK+ +
Sbjct: 484 -------GFGIHGLGKEALSLFNSMQDTGVHPDEVTLLAILSACSHSGLVDEGKQLFNSM 536
Query: 121 TRNGFMSNPFV--VNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCEN-GNVA 177
+R F P + N + D+ R G + A +K + ++ ++ C NV
Sbjct: 537 SRGDFNVIPRLDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNVE 596
Query: 178 EARELFDQMEHLG 190
E+ +M+ LG
Sbjct: 597 LGNEVSKKMQSLG 609
>gi|297596789|ref|NP_001043072.2| Os01g0374200 [Oryza sativa Japonica Group]
gi|255673241|dbj|BAF04986.2| Os01g0374200 [Oryza sativa Japonica Group]
Length = 629
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 185/599 (30%), Positives = 295/599 (49%), Gaps = 76/599 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G + DA++VF MP+R N
Sbjct: 56 MYCKLGIVSDARRVFDGMPQR------------------------------------NSF 79
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGL--EPNARTLSSVLPACARLQKLSLGKEFHG 118
SWS ++ G+ EEA LFR+ E E + ++VL A + L +G++ HG
Sbjct: 80 SWSTMVAGYAAEKCSEEAFD-LFRLMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHG 138
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
I ++G + V N LV +Y + G M +A +F
Sbjct: 139 LIVKDGLLDFVSVENSLVTMYAKAGCMGAAFHVFES------------------------ 174
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
+RE R I+W++MI+GY N D A SMF + G PT FTF VL
Sbjct: 175 SRE-----------RNSITWSAMITGYAQNGEADSAVSMFSQM-HAAGFTPTEFTFVGVL 222
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
A +D+ +L GK+ H L + LG + +V ALV+MY + + A+ FD++ ++ +
Sbjct: 223 NASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIV 282
Query: 299 LGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYA 358
L G N A+ L++ M + P T+ L AC+ +A +E GKQ+H
Sbjct: 283 LWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQI 342
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGI 418
++ G +G+AL MY+KCG+L+ ++RI D+++ N++++ ++ +G G +
Sbjct: 343 VKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGAL 402
Query: 419 AHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDL 477
F + G PD+I+F++ L AC H G + G E+F LM Y + P L HY CMVD+
Sbjct: 403 DLFEEMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMVDI 462
Query: 478 LSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNY 537
LSRAG L EA +FI+ I + + +W +LG C S + + G A +RL+EL ++ Y
Sbjct: 463 LSRAGMLKEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGERLMELGTGDSSAY 522
Query: 538 VMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEI 596
++L+N++A +W+D+ R R M+ R ++K PGCSW+E +H F ++ H +E I
Sbjct: 523 ILLSNIYASQRKWNDVERVRHLMRLRGVNKDPGCSWVELNSRVHVFVVGEQQHPEAENI 581
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 176/359 (49%), Gaps = 5/359 (1%)
Query: 156 SIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAF 215
++ N C +++ YC+ G V++AR +FD M QR SW++M++GY +EAF
Sbjct: 43 AVSNVYVCTSLLNMYCKLGIVSDARRVFDGMP----QRNSFSWSTMVAGYAAEKCSEEAF 98
Query: 216 SMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEM 275
+FR +L E + F +VL A + L G+++H L + GL V +LV M
Sbjct: 99 DLFRLMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTM 158
Query: 276 YCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTV 335
Y + + AA F+ ++ G+ N +A+ +FS+M + TP +T
Sbjct: 159 YAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTF 218
Query: 336 GIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST 395
+L+A S L + GKQ H ++ G++ +++ +ALVDMYAKCG + A+ + ++
Sbjct: 219 VGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYE 278
Query: 396 PDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEF 455
D+V AM++ + +G +E + + R+ G P + S L AC +++ G +
Sbjct: 279 VDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQL 338
Query: 456 FDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
+ Y + + + + S+ G L + ++IP D + W +++ G +G
Sbjct: 339 HTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIP-DRDVIAWNSIISGFSQNG 396
>gi|297597850|ref|NP_001044616.2| Os01g0815900 [Oryza sativa Japonica Group]
gi|56785064|dbj|BAD82703.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|255673814|dbj|BAF06530.2| Os01g0815900 [Oryza sativa Japonica Group]
Length = 566
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 172/553 (31%), Positives = 284/553 (51%), Gaps = 68/553 (12%)
Query: 55 ETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGK 114
E P W+ +I G Q+ +AI + Q G+ P+ T +L ACAR+ L+ G+
Sbjct: 48 EAPTTFLWNILIRGLAQSDAPADAIAFYKKAQGGGMVPDNLTFPFILKACARINALNEGE 107
Query: 115 EFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
+ H +IT+ G +S+ FV N L+ +Y CG
Sbjct: 108 QMHNHITKLGLLSDIFVSNSLIHLYAACG------------------------------- 136
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTF 234
N+ AR +FD+M V + ++SWNS+I GY + + + ++F+ L+ +G++ T
Sbjct: 137 NLCYARSVFDEM----VVKDVVSWNSLICGYSQCNRFKDILALFK-LMQNEGVKADKVTM 191
Query: 235 GSVLIACADM-------------------------NSL-----RKGKEIHALAIALGLQS 264
V+ AC + N+L R+G+ A + ++
Sbjct: 192 IKVVSACTRLGDYSMADYMVRYIEDYCIEVDVYLGNTLVDYFGRRGQLQSAEKVFFNMKV 251
Query: 265 DTFVG-GALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEM 323
V A++ Y + QD+V+A+ FD+I + + G+ + +A+++F +M
Sbjct: 252 RNIVTMNAMIAAYAKGQDIVSARKIFDQIPKKDLISWSSMISGYSQANHFSDALEIFRQM 311
Query: 324 LSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSL 383
+ PD + ++S+C+ L ++ GK VH Y R +D + +L+DMY KCGS
Sbjct: 312 QRAKVKPDAIVIASVVSSCAHLGALDLGKWVHEYVRRNNIKADTIMENSLIDMYMKCGSA 371
Query: 384 KHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSAC 443
K A +K + D +S N+++ A +G KE + F+ +L GFRP+ ++FL L AC
Sbjct: 372 KEALQVFKEMKEKDTLSWNSIIIGLANNGFEKESLNLFQAMLTEGFRPNGVTFLGVLIAC 431
Query: 444 VHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVM 502
+A ++ G + F+ M Y ++P +KHY C+VDLL RAG+L +A FI ++P+ PD V+
Sbjct: 432 ANAKLVEEGLDHFESMKRLYSLEPQMKHYGCVVDLLGRAGQLEKALRFITEMPIDPDPVV 491
Query: 503 WGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKD 562
W LLG C +HG++ +I +L ELEP+N+GNY +L+N +A A RWS+ RQ M D
Sbjct: 492 WRILLGSCNTHGDVAIAEIVTKKLNELEPSNSGNYTLLSNAYASAHRWSEAMNVRQCMAD 551
Query: 563 RRMHKSPGCSWIE 575
+ KSPGCS +E
Sbjct: 552 TDVRKSPGCSAVE 564
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 110/416 (26%), Positives = 191/416 (45%), Gaps = 47/416 (11%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y CG+L A+ VF M +D VSWNS
Sbjct: 131 LYAACGNLCYARSVFDEMVVKDVVSWNS-------------------------------- 158
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+I G++Q ++ + + MQ EG++ + T+ V+ AC RL S+ YI
Sbjct: 159 ----LICGYSQCNRFKDILALFKLMQNEGVKADKVTMIKVVSACTRLGDYSMADYMVRYI 214
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ ++ N LVD + R G + SA K+F ++N V+ N +I Y + ++ AR
Sbjct: 215 EDYCIEVDVYLGNTLVDYFGRRGQLQSAEKVFFNMKVRNIVTMNAMIAAYAKGQDIVSAR 274
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
++FDQ+ ++ +ISW+SMISGY + + +A +FR + R ++P + SV+ +
Sbjct: 275 KIFDQIP----KKDLISWSSMISGYSQANHFSDALEIFRQ-MQRAKVKPDAIVIASVVSS 329
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA + +L GK +H +++DT + +L++MY + A F E++ + L
Sbjct: 330 CAHLGALDLGKWVHEYVRRNNIKADTIMENSLIDMYMKCGSAKEALQVFKEMKEKDTLSW 389
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G N + ++ LF ML+ P+ T +L AC++ +E G H +++
Sbjct: 390 NSIIIGLANNGFEKESLNLFQAMLTEGFRPNGVTFLGVLIACANAKLVEEGLD-HFESMK 448
Query: 361 CGYDSDV---HIGTALVDMYAKCGSLKHA-RLAYKRISTPDLVSQNAMLTAYAMHG 412
Y + H G +VD+ + G L+ A R + PD V +L + HG
Sbjct: 449 RLYSLEPQMKHYG-CVVDLLGRAGQLEKALRFITEMPIDPDPVVWRILLGSCNTHG 503
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 110/238 (46%), Gaps = 1/238 (0%)
Query: 251 KEIHALAIALGLQSDTFVGGALVEMYCRYQ-DLVAAQMAFDEIENIENLLGKMKEDGFEP 309
K +HA I GL + + ++ Y Q DLV A FD+IE L + G
Sbjct: 5 KRLHAYYIVSGLYNCHYAMSKVLRSYAILQPDLVFAHKVFDQIEAPTTFLWNILIRGLAQ 64
Query: 310 NVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHI 369
+ +A+ + + + PD T IL AC+ + + G+Q+H + + G SD+ +
Sbjct: 65 SDAPADAIAFYKKAQGGGMVPDNLTFPFILKACARINALNEGEQMHNHITKLGLLSDIFV 124
Query: 370 GTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGF 429
+L+ +YA CG+L +AR + + D+VS N+++ Y+ K+ +A F+ + G
Sbjct: 125 SNSLIHLYAACGNLCYARSVFDEMVVKDVVSWNSLICGYSQCNRFKDILALFKLMQNEGV 184
Query: 430 RPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEA 487
+ D ++ + +SAC G + Y ++ + +VD R G+L A
Sbjct: 185 KADKVTMIKVVSACTRLGDYSMADYMVRYIEDYCIEVDVYLGNTLVDYFGRRGQLQSA 242
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 81/191 (42%), Gaps = 38/191 (19%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGS +A +VFK M E+D +SWNS++ A NG
Sbjct: 364 MYMKCGSAKEALQVFKEMKEKDTLSWNSIIIGLANNG----------------------- 400
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+++E++ + M EG PN T VL ACA + + G + +
Sbjct: 401 -------------FEKESLNLFQAMLTEGFRPNGVTFLGVLIACANAKLVEEGLDHFESM 447
Query: 121 TRNGFMSNPFVVNG-LVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCE-NGNVAE 178
R + G +VD+ R G + AL+ ++ I + I++G C +G+VA
Sbjct: 448 KRLYSLEPQMKHYGCVVDLLGRAGQLEKALRFITEMPIDPDPVVWRILLGSCNTHGDVAI 507
Query: 179 ARELFDQMEHL 189
A + ++ L
Sbjct: 508 AEIVTKKLNEL 518
>gi|242076488|ref|XP_002448180.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
gi|241939363|gb|EES12508.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
Length = 1029
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 179/605 (29%), Positives = 301/605 (49%), Gaps = 76/605 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G++D AK +F ++P +D VS
Sbjct: 472 MYSKLGAIDVAKALFSLIPGKDSVS----------------------------------- 496
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
W+A+I G N +EEA+ ML RM+ G+ P+ + ++ + AC+ ++ GK+ H
Sbjct: 497 -WNALIVGLAHNEEEEEAVYMLKRMKCYGIAPDEVSFATAINACSNIRATETGKQIHCAS 555
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ SN V + L+D+Y + GD+ S+ K+ + +
Sbjct: 556 IKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASS--------------------- 594
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
++ N++I+G V N+ DEA +F+ +L +DG +P++FTF S+L
Sbjct: 595 --------------MVPINALITGLVQNNREDEAIELFQQVL-KDGFKPSNFTFASILSG 639
Query: 241 CADMNSLRKGKEIHALAIALGL-QSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
C S GK++H+ + L DT +G +LV +Y + + L A E+ + +NL+
Sbjct: 640 CTGPVSSVIGKQVHSYTLKSALLNQDTSLGISLVGIYLKCKLLEDANKLLAEVPDHKNLV 699
Query: 300 GKMKE-DGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYA 358
G+ N Y+ ++ +F M S D+ D T +L ACS +A + GK++H
Sbjct: 700 EWTATISGYAQNGYSDQSLVMFWRMRSHDVRSDEATFASVLKACSEIAALTDGKEIHGLI 759
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTP-DLVSQNAMLTAYAMHGHGKEG 417
I+ G+ S +AL+DMY+KCG + + +K + +++ N+M+ +A +G+ E
Sbjct: 760 IKSGFVSYETAASALMDMYSKCGDVISSFEIFKELKNKQNIMPWNSMIVGFAKNGYANEA 819
Query: 418 IAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVD 476
+ F+++ S +PD ++ L L AC HAG I G FD M+ Y + P + HY C++D
Sbjct: 820 LLLFQKMQESQLKPDEVTLLGVLIACSHAGLISEGRNLFDSMSQVYGIVPRVDHYACLID 879
Query: 477 LLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGN 536
LL R G L EA E I ++P D V+W L C H + E G++AA +L+E+EP +
Sbjct: 880 LLGRGGHLQEAQEVIDQLPFRADGVIWATFLAACQMHKDEERGKVAAKKLVEMEPQRSST 939
Query: 537 YVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEI 596
YV L++L A AG W + R+ M+++ + K PGCSWI ++ + F D H + I
Sbjct: 940 YVFLSSLHAAAGNWVEAKVAREAMREKGVMKFPGCSWITVGNKTNLFVVQDTHHPDTLGI 999
Query: 597 YTIID 601
Y ++D
Sbjct: 1000 YKMLD 1004
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 132/481 (27%), Positives = 240/481 (49%), Gaps = 34/481 (7%)
Query: 65 VIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEFHGYITRN 123
V+ ++G + + R++ G P+ L+ VL AC+RL L G++ H + ++
Sbjct: 130 VLSCHARSGSPRDVLDAFQRLRCSIGGTPDQFGLAVVLSACSRLGALEQGRQVHCDVLKS 189
Query: 124 GFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELF 183
GF S+ F GLVD+Y +C ++ A ++F + + + ++I GY G +A LF
Sbjct: 190 GFCSSAFCQAGLVDMYAKCVEVKDARRVFDGIACPDTICWASMIAGYHRVGRYQQALALF 249
Query: 184 DQMEHLG---------------------------VQR----GIISWNSMISGYVDNSLYD 212
+ME +G ++R ++WN++IS Y + L
Sbjct: 250 SRMEKMGSAPDQVTYVTIISTLASMGRLSDARTLLKRIQMPSTVAWNAVISSYSQSGLES 309
Query: 213 EAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGAL 272
E F +++D + R G+ PT TF S+L A A M + +G++IHA A+ GL ++ FVG +L
Sbjct: 310 EVFGLYKD-MKRQGLMPTRSTFASMLSAAASMTAFDEGQQIHAAAVKHGLDANVFVGSSL 368
Query: 273 VEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDI 332
+ +Y ++ + A+ FD ++ GF N +Q+F M DL D
Sbjct: 369 INLYVKHGCISDAKKVFDFSTEKNIVMWNAMLYGFVQNDLQEETIQMFQYMRRADLEADD 428
Query: 333 YTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKR 392
+T +L AC +L +++ G+QVH I+ D+D+ + A++DMY+K G++ A+ +
Sbjct: 429 FTFVSVLGACINLDSLDIGRQVHCITIKNSMDADLFVANAMLDMYSKLGAIDVAKALFSL 488
Query: 393 ISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTG 452
I D VS NA++ A + +E + +R+ G PD +SF +A++AC + + +TG
Sbjct: 489 IPGKDSVSWNALIVGLAHNEEEEEAVYMLKRMKCYGIAPDEVSFATAINACSNIRATETG 548
Query: 453 SEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVS 512
+ Y+V + + ++DL S+ G++ + + + + A V AL+ G V
Sbjct: 549 KQIHCASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVD-ASSMVPINALITGLVQ 607
Query: 513 H 513
+
Sbjct: 608 N 608
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 135/549 (24%), Positives = 244/549 (44%), Gaps = 75/549 (13%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDN------ 54
MY KC + DA++VF + D + W S++ G +AL RM + +
Sbjct: 204 MYAKCVEVKDARRVFDGIACPDTICWASMIAGYHRVGRYQQALALFSRMEKMGSAPDQVT 263
Query: 55 ------------------------ETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGL 90
+ P+ V+W+AVI ++Q+G + E G+ M+ +GL
Sbjct: 264 YVTIISTLASMGRLSDARTLLKRIQMPSTVAWNAVISSYSQSGLESEVFGLYKDMKRQGL 323
Query: 91 EPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALK 150
P T +S+L A A + G++ H ++G +N FV + L+++Y + G + A K
Sbjct: 324 MPTRSTFASMLSAAASMTAFDEGQQIHAAAVKHGLDANVFVGSSLINLYVKHGCISDAKK 383
Query: 151 IFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSL 210
+F + KN V N ++ G+ V N L
Sbjct: 384 VFDFSTEKNIVMWNAMLYGF-----------------------------------VQNDL 408
Query: 211 YDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGG 270
+E MF+ + R +E FTF SVL AC +++SL G+++H + I + +D FV
Sbjct: 409 QEETIQMFQ-YMRRADLEADDFTFVSVLGACINLDSLDIGRQVHCITIKNSMDADLFVAN 467
Query: 271 ALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTP 330
A+++MY + + A+ F I +++ G N A+ + M + P
Sbjct: 468 AMLDMYSKLGAIDVAKALFSLIPGKDSVSWNALIVGLAHNEEEEEAVYMLKRMKCYGIAP 527
Query: 331 DIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAY 390
D + ++ACS++ E GKQ+H +I+ S+ +G++L+D+Y+K G ++ +R
Sbjct: 528 DEVSFATAINACSNIRATETGKQIHCASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVL 587
Query: 391 KRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIK 450
+ +V NA++T + E I F+++L GF+P + +F S LS C S
Sbjct: 588 AHVDASSMVPINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTFASILSGCTGPVSSV 647
Query: 451 TGSEFFDLMAYYDVKPSLKHY-----TCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGA 505
G + Y +K +L + +V + + L +A + + ++P + V W A
Sbjct: 648 IGKQVHS----YTLKSALLNQDTSLGISLVGIYLKCKLLEDANKLLAEVPDHKNLVEWTA 703
Query: 506 LLGGCVSHG 514
+ G +G
Sbjct: 704 TISGYAQNG 712
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 126/278 (45%), Gaps = 18/278 (6%)
Query: 253 IHALAIALGLQSDTFVGGALVEMYCR-------YQDLVAAQMAFDEIENIENLLGKMKED 305
+HA + LGL +G ALV++Y R ++ L A ++L
Sbjct: 78 LHARVLRLGLPLRGRLGDALVDLYGRSGRVGYAWRALGCCTGAPASGAAASSVLSCHARS 137
Query: 306 GFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDS 365
G +V +A Q S+ TPD + + ++LSACS L +E+G+QVH ++ G+ S
Sbjct: 138 GSPRDVL--DAFQRLR--CSIGGTPDQFGLAVVLSACSRLGALEQGRQVHCDVLKSGFCS 193
Query: 366 DVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRIL 425
LVDMYAKC +K AR + I+ PD + +M+ Y G ++ +A F R+
Sbjct: 194 SAFCQAGLVDMYAKCVEVKDARRVFDGIACPDTICWASMIAGYHRVGRYQQALALFSRME 253
Query: 426 ASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAG--- 482
G PD +++++ +S G + + PS + ++ S++G
Sbjct: 254 KMGSAPDQVTYVTIISTLASMGRLSDARTLLKRIQM----PSTVAWNAVISSYSQSGLES 309
Query: 483 ELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQ 520
E+ Y+ +K+ + P + ++L S + GQ
Sbjct: 310 EVFGLYKDMKRQGLMPTRSTFASMLSAAASMTAFDEGQ 347
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/342 (21%), Positives = 131/342 (38%), Gaps = 69/342 (20%)
Query: 213 EAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGAL 272
+ F+ L G P F VL AC+ + +L +G+++H + G S F L
Sbjct: 142 DVLDAFQRLRCSIGGTPDQFGLAVVLSACSRLGALEQGRQVHCDVLKSGFCSSAFCQAGL 201
Query: 273 VEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDI 332
V+MY + ++ A+ FD I + + G+ A+ LFS M + PD
Sbjct: 202 VDMYAKCVEVKDARRVFDGIACPDTICWASMIAGYHRVGRYQQALALFSRMEKMGSAPDQ 261
Query: 333 YTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKR 392
T I+S +LA+M G L AR KR
Sbjct: 262 VTYVTIIS---TLASM--------------------------------GRLSDARTLLKR 286
Query: 393 ISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSAC--------- 443
I P V+ NA++++Y+ G E ++ + G P +F S LSA
Sbjct: 287 IQMPSTVAWNAVISSYSQSGLESEVFGLYKDMKRQGLMPTRSTFASMLSAAASMTAFDEG 346
Query: 444 --VHAGSIK--------TGSEFFDLMAYY----DVKPSLKHYTCMVDLLSRAGELG---- 485
+HA ++K GS +L + D K T ++ A G
Sbjct: 347 QQIHAAAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAMLYGFVQN 406
Query: 486 -------EAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQ 520
+ ++++++ + D + ++LG C++ +L+ G+
Sbjct: 407 DLQEETIQMFQYMRRADLEADDFTFVSVLGACINLDSLDIGR 448
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 98/219 (44%), Gaps = 24/219 (10%)
Query: 354 VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHA--RLAYKRISTPDLVSQNAMLTAYAMH 411
+HA +R G +G ALVD+Y + G + +A L + + +++L+ +A
Sbjct: 78 LHARVLRLGLPLRGRLGDALVDLYGRSGRVGYAWRALGCCTGAPASGAAASSVLSCHARS 137
Query: 412 GHGKEGIAHFRRILAS-GFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKH 470
G ++ + F+R+ S G PD LSAC G+++ G + + DV LK
Sbjct: 138 GSPRDVLDAFQRLRCSIGGTPDQFGLAVVLSACSRLGALEQGRQ-----VHCDV---LKS 189
Query: 471 YTC--------MVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIA 522
C +VD+ ++ E+ +A I PD++ W +++ G G +
Sbjct: 190 GFCSSAFCQAGLVDMYAKCVEVKDARRVFDGIA-CPDTICWASMIAGYHRVGRYQQALAL 248
Query: 523 ADRLIEL--EPNNTGNYVMLANLFAYAGRWSDLARTRQK 559
R+ ++ P+ YV + + A GR SD ART K
Sbjct: 249 FSRMEKMGSAPDQV-TYVTIISTLASMGRLSD-ARTLLK 285
>gi|116310835|emb|CAH67622.1| OSIGBa0140J09.3 [Oryza sativa Indica Group]
Length = 1027
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 182/604 (30%), Positives = 300/604 (49%), Gaps = 76/604 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G++ DAK +F ++P +D +S
Sbjct: 470 MYSKYGAIGDAKALFSLIPYKDSIS----------------------------------- 494
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
W+A+ G QN +EEA+ ML RM+ G+ P+ + S+ + AC+ ++ GK+ H
Sbjct: 495 -WNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLA 553
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G SN V + L+D+Y + GD V +R
Sbjct: 554 IKYGICSNHAVGSSLIDLYSKHGD-------------------------------VESSR 582
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
++F Q++ I+ N++I+G+V N+ DEA +F+ +L +DG++P+S TF S+L
Sbjct: 583 KIFAQVD----ASSIVPINALIAGFVQNNNEDEAIQLFQQVL-KDGLKPSSVTFSSILSG 637
Query: 241 CADMNSLRKGKEIHALAIALG-LQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
C+ + GK++H + G L DT +G +L +Y + + L A E+ + +NL
Sbjct: 638 CSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLF 697
Query: 300 GKMKE-DGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYA 358
G+ N Y +++ F M ++ D T +L ACS + GK++H
Sbjct: 698 EWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFADGKEIHGLI 757
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTP-DLVSQNAMLTAYAMHGHGKEG 417
+ G+ S +AL+DMY+KCG + + A+K + D++ N+M+ +A +G+ E
Sbjct: 758 TKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKNGYADEA 817
Query: 418 IAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMVD 476
+ F+++ +PD ++FL L AC H+G I G FF M Y + P L HY C +D
Sbjct: 818 LLLFQKMEELQIKPDEVTFLGVLIACTHSGLISEGRHFFGPMRKVYGLTPRLDHYACFID 877
Query: 477 LLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGN 536
LL R G L EA E I ++P PD V+W L C H + E G+IAA +L+ELEP +
Sbjct: 878 LLGRGGHLQEAQEAIDQLPFRPDGVVWATYLAACRMHKDEERGKIAARKLVELEPQYSST 937
Query: 537 YVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEI 596
YV+L++L A G W++ TR+ M+++ + K PGCSWI ++ F D+ H + I
Sbjct: 938 YVLLSSLHAATGNWAEAKVTRESMREKGVAKFPGCSWITVGNKTSLFLVQDKYHPDNLRI 997
Query: 597 YTII 600
Y ++
Sbjct: 998 YEML 1001
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 139/555 (25%), Positives = 257/555 (46%), Gaps = 87/555 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDN------ 54
MY KCG + +A++VF + D + W+S++ G EAL RM + +
Sbjct: 202 MYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVT 261
Query: 55 ------------------------ETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGL 90
TP+ V+W+AVI G Q+G + +G+ M++ GL
Sbjct: 262 LVTIISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGL 321
Query: 91 EPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALK 150
P T +S+L A A ++ G++ H +G +N FV + L+++Y +CG
Sbjct: 322 WPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCG------- 374
Query: 151 IFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSL 210
C ++A+ +FD L ++ I+ WN+M++G+V N L
Sbjct: 375 --------------------CP----SDAKNVFD----LSCEKNIVMWNAMLTGFVQNEL 406
Query: 211 YDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGG 270
+EA MF+ +MR ++ FTF S+L AC ++S GK++H + I + FV
Sbjct: 407 PEEAIRMFQ-YMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVAN 465
Query: 271 ALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTP 330
A ++MY +Y + A+ F I +++ G N+ A+ + M +TP
Sbjct: 466 ATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITP 525
Query: 331 DIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAY 390
D + ++ACS++ E GKQ+H AI+ G S+ +G++L+D+Y+K G ++ +R +
Sbjct: 526 DDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIF 585
Query: 391 KRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSAC------- 443
++ +V NA++ + + + E I F+++L G +P ++F S LS C
Sbjct: 586 AQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSA 645
Query: 444 ----VHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPD 499
VH ++K+G + D + + + ++ L +A + + ++P +
Sbjct: 646 IGKQVHCYTLKSGVLYDDTLL----------GVSLAGIYLKSKMLEDANKLLTEMPDHKN 695
Query: 500 SVMWGALLGGCVSHG 514
W A++ G +G
Sbjct: 696 LFEWTAIISGYAQNG 710
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 129/475 (27%), Positives = 230/475 (48%), Gaps = 40/475 (8%)
Query: 89 GLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSA 148
G P+ L+ VL AC+R+ L+ G++ H + ++GF S+ F LVD+Y +CGD+ +A
Sbjct: 153 GGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNA 212
Query: 149 LKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGV----------------- 191
++F + + + +++I Y G EA LF +M+ +G
Sbjct: 213 RRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLASS 272
Query: 192 --------------QRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRD-GIEPTSFTFGS 236
++WN++ISG+ + L +++D MR G+ PT TF S
Sbjct: 273 GRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKD--MRSWGLWPTRSTFAS 330
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
+L A A+M + +G+++HA A+ GL ++ FVG +L+ +Y + A+ FD
Sbjct: 331 MLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKN 390
Query: 297 NLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHA 356
++ GF N A+++F M+ L D +T IL AC+ L++ GKQVH
Sbjct: 391 IVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHC 450
Query: 357 YAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKE 416
I+ D + + A +DMY+K G++ A+ + I D +S NA+ A + +E
Sbjct: 451 VTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEE 510
Query: 417 GIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVD 476
+ +R+ G PD +SF +A++AC + + +TG + L Y + + + ++D
Sbjct: 511 AVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLID 570
Query: 477 LLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE-----FGQIAADRL 526
L S+ G++ + + ++ A V AL+ G V + N + F Q+ D L
Sbjct: 571 LYSKHGDVESSRKIFAQVD-ASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGL 624
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 102/420 (24%), Positives = 175/420 (41%), Gaps = 73/420 (17%)
Query: 164 NTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLM 223
++++ YC++G V A + + + G +R + +S++S + + + FR +
Sbjct: 95 DSLVELYCKSGRVGYA---WSALGYAG-ERASGAASSLLSCHARSGSPGDVLGAFRYIRC 150
Query: 224 RDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLV 283
G P F VL AC+ + L G+++H + G S F ALV+MY + D+
Sbjct: 151 TAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVP 210
Query: 284 AAQMAFDEI---------------------ENIENLLGKMKEDGFEPNVYT--------- 313
A+ FD I + L +M + G P+ T
Sbjct: 211 NARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLA 270
Query: 314 ----------------------WNA--------------MQLFSEMLSLDLTPDIYTVGI 337
WNA + L+ +M S L P T
Sbjct: 271 SSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFAS 330
Query: 338 ILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPD 397
+LSA +++ G+Q+HA A+ G D++V +G++L+++YAKCG A+ + +
Sbjct: 331 MLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKN 390
Query: 398 LVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFD 457
+V NAMLT + + +E I F+ ++ + D +F+S L AC + S G +
Sbjct: 391 IVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHC 450
Query: 458 LMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
+ + SL +D+ S+ G +G+A IP DS+ W AL G NLE
Sbjct: 451 VTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPY-KDSISWNALTVGLAQ--NLE 507
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 69/158 (43%), Gaps = 2/158 (1%)
Query: 352 KQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMH 411
+ +H +R G +G +LV++Y K G + +A A + +++L+ +A
Sbjct: 76 RALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARS 135
Query: 412 GHGKEGIAHFRRI-LASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKH 470
G + + FR I +G RPD LSAC G + G + + S+
Sbjct: 136 GSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFC 195
Query: 471 YTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLG 508
+VD+ ++ G++ A I PD++ W +++
Sbjct: 196 EAALVDMYAKCGDVPNARRVFDGIA-CPDTICWSSMIA 232
>gi|115459414|ref|NP_001053307.1| Os04g0514500 [Oryza sativa Japonica Group]
gi|32482936|emb|CAE02340.1| OSJNBb0072M01.1 [Oryza sativa Japonica Group]
gi|38345689|emb|CAD41109.2| OSJNBb0070J16.5 [Oryza sativa Japonica Group]
gi|113564878|dbj|BAF15221.1| Os04g0514500 [Oryza sativa Japonica Group]
gi|215768472|dbj|BAH00701.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218195211|gb|EEC77638.1| hypothetical protein OsI_16630 [Oryza sativa Indica Group]
Length = 1027
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 182/604 (30%), Positives = 300/604 (49%), Gaps = 76/604 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G++ DAK +F ++P +D +S
Sbjct: 470 MYSKYGAIGDAKALFSLIPYKDSIS----------------------------------- 494
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
W+A+ G QN +EEA+ ML RM+ G+ P+ + S+ + AC+ ++ GK+ H
Sbjct: 495 -WNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLA 553
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G SN V + L+D+Y + GD V +R
Sbjct: 554 IKYGICSNHAVGSSLIDLYSKHGD-------------------------------VESSR 582
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
++F Q++ I+ N++I+G+V N+ DEA +F+ +L +DG++P+S TF S+L
Sbjct: 583 KIFAQVD----ASSIVPINALIAGFVQNNNEDEAIQLFQQVL-KDGLKPSSVTFSSILSG 637
Query: 241 CADMNSLRKGKEIHALAIALG-LQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
C+ + GK++H + G L DT +G +L +Y + + L A E+ + +NL
Sbjct: 638 CSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLF 697
Query: 300 GKMKE-DGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYA 358
G+ N Y +++ F M ++ D T +L ACS + GK++H
Sbjct: 698 EWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFADGKEIHGLI 757
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTP-DLVSQNAMLTAYAMHGHGKEG 417
+ G+ S +AL+DMY+KCG + + A+K + D++ N+M+ +A +G+ E
Sbjct: 758 TKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKNGYADEA 817
Query: 418 IAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMVD 476
+ F+++ +PD ++FL L AC H+G I G FF M Y + P L HY C +D
Sbjct: 818 LLLFQKMEELQIKPDEVTFLGVLIACTHSGLISEGRHFFGSMRKVYGLTPRLDHYACFID 877
Query: 477 LLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGN 536
LL R G L EA E I ++P PD V+W L C H + E G+IAA +L+ELEP +
Sbjct: 878 LLGRGGHLQEAQEAIDQLPFRPDGVVWATYLAACRMHKDEERGKIAARKLVELEPQYSST 937
Query: 537 YVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEI 596
YV+L++L A G W++ TR+ M+++ + K PGCSWI ++ F D+ H + I
Sbjct: 938 YVLLSSLHAATGNWAEAKVTRESMREKGVAKFPGCSWITVGNKTSLFLVQDKYHPDNLRI 997
Query: 597 YTII 600
Y ++
Sbjct: 998 YEML 1001
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 139/555 (25%), Positives = 257/555 (46%), Gaps = 87/555 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDN------ 54
MY KCG + +A++VF + D + W+S++ G EAL RM + +
Sbjct: 202 MYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVT 261
Query: 55 ------------------------ETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGL 90
TP+ V+W+AVI G Q+G + +G+ M++ GL
Sbjct: 262 LVTIISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGL 321
Query: 91 EPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALK 150
P T +S+L A A ++ G++ H +G +N FV + L+++Y +CG
Sbjct: 322 WPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCG------- 374
Query: 151 IFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSL 210
C ++A+ +FD L ++ I+ WN+M++G+V N L
Sbjct: 375 --------------------CP----SDAKNVFD----LSCEKNIVMWNAMLTGFVQNEL 406
Query: 211 YDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGG 270
+EA MF+ +MR ++ FTF S+L AC ++S GK++H + I + FV
Sbjct: 407 PEEAIRMFQ-YMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVAN 465
Query: 271 ALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTP 330
A ++MY +Y + A+ F I +++ G N+ A+ + M +TP
Sbjct: 466 ATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITP 525
Query: 331 DIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAY 390
D + ++ACS++ E GKQ+H AI+ G S+ +G++L+D+Y+K G ++ +R +
Sbjct: 526 DDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIF 585
Query: 391 KRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSAC------- 443
++ +V NA++ + + + E I F+++L G +P ++F S LS C
Sbjct: 586 AQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSA 645
Query: 444 ----VHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPD 499
VH ++K+G + D + + + ++ L +A + + ++P +
Sbjct: 646 IGKQVHCYTLKSGVLYDDTLL----------GVSLAGIYLKSKMLEDANKLLTEMPDHKN 695
Query: 500 SVMWGALLGGCVSHG 514
W A++ G +G
Sbjct: 696 LFEWTAIISGYAQNG 710
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 129/475 (27%), Positives = 230/475 (48%), Gaps = 40/475 (8%)
Query: 89 GLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSA 148
G P+ L+ VL AC+R+ L+ G++ H + ++GF S+ F LVD+Y +CGD+ +A
Sbjct: 153 GGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNA 212
Query: 149 LKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGV----------------- 191
++F + + + +++I Y G EA LF +M+ +G
Sbjct: 213 RRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLASS 272
Query: 192 --------------QRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRD-GIEPTSFTFGS 236
++WN++ISG+ + L +++D MR G+ PT TF S
Sbjct: 273 GRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKD--MRSWGLWPTRSTFAS 330
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
+L A A+M + +G+++HA A+ GL ++ FVG +L+ +Y + A+ FD
Sbjct: 331 MLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKN 390
Query: 297 NLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHA 356
++ GF N A+++F M+ L D +T IL AC+ L++ GKQVH
Sbjct: 391 IVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHC 450
Query: 357 YAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKE 416
I+ D + + A +DMY+K G++ A+ + I D +S NA+ A + +E
Sbjct: 451 VTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEE 510
Query: 417 GIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVD 476
+ +R+ G PD +SF +A++AC + + +TG + L Y + + + ++D
Sbjct: 511 AVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLID 570
Query: 477 LLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE-----FGQIAADRL 526
L S+ G++ + + ++ A V AL+ G V + N + F Q+ D L
Sbjct: 571 LYSKHGDVESSRKIFAQVD-ASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGL 624
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 102/420 (24%), Positives = 175/420 (41%), Gaps = 73/420 (17%)
Query: 164 NTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLM 223
++++ YC++G V A + + + G +R + +S++S + + + FR +
Sbjct: 95 DSLVELYCKSGRVGYA---WSALGYAG-ERASGAASSLLSCHARSGSPGDVLGAFRYIRC 150
Query: 224 RDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLV 283
G P F VL AC+ + L G+++H + G S F ALV+MY + D+
Sbjct: 151 TAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVP 210
Query: 284 AAQMAFDEI---------------------ENIENLLGKMKEDGFEPNVYT--------- 313
A+ FD I + L +M + G P+ T
Sbjct: 211 NARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLA 270
Query: 314 ----------------------WNA--------------MQLFSEMLSLDLTPDIYTVGI 337
WNA + L+ +M S L P T
Sbjct: 271 SSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFAS 330
Query: 338 ILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPD 397
+LSA +++ G+Q+HA A+ G D++V +G++L+++YAKCG A+ + +
Sbjct: 331 MLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKN 390
Query: 398 LVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFD 457
+V NAMLT + + +E I F+ ++ + D +F+S L AC + S G +
Sbjct: 391 IVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHC 450
Query: 458 LMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
+ + SL +D+ S+ G +G+A IP DS+ W AL G NLE
Sbjct: 451 VTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPY-KDSISWNALTVGLAQ--NLE 507
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 69/158 (43%), Gaps = 2/158 (1%)
Query: 352 KQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMH 411
+ +H +R G +G +LV++Y K G + +A A + +++L+ +A
Sbjct: 76 RALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARS 135
Query: 412 GHGKEGIAHFRRI-LASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKH 470
G + + FR I +G RPD LSAC G + G + + S+
Sbjct: 136 GSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFC 195
Query: 471 YTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLG 508
+VD+ ++ G++ A I PD++ W +++
Sbjct: 196 EAALVDMYAKCGDVPNARRVFDGIA-CPDTICWSSMIA 232
>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
Length = 738
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 179/552 (32%), Positives = 289/552 (52%), Gaps = 16/552 (2%)
Query: 57 PNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLE-PNARTLSSVLPACARLQKLSLGKE 115
PNL +W+ +I F + + + + +M E PN+ T V+ A + L G+
Sbjct: 93 PNLYTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVSSLLAGQA 152
Query: 116 FHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGN 175
HG + + F S+ F+ N L+ Y GD+ SA +FSK K+ VS N++I G+ + G+
Sbjct: 153 IHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGS 212
Query: 176 VAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFR-DLLMRDGIEPTSFTF 234
EA +LF +M+ + ++ ++S D F + D + R+GI+
Sbjct: 213 PEEALQLFKRMKMENARPNRVTMVGVLSACAKR--IDLEFGRWACDYIERNGIDINLILS 270
Query: 235 GSVL---IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDE 291
++L + C + R+ + + D +++ Y + D AA+ FD
Sbjct: 271 NAMLDMYVKCGSLEDARRLFDKME-------EKDIVSWTTMIDGYAKVGDYDAARRVFDV 323
Query: 292 IENIENLLGKMKEDGFEPNVYTWNAMQLFSEM-LSLDLTPDIYTVGIILSACSSLATMER 350
+ + ++ N A+ +F E+ L+ + P+ T+ L+AC+ L M+
Sbjct: 324 MPREDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDL 383
Query: 351 GKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAM 410
G +H Y + G + HI T+L+DMY+KCG L+ A + + D+ +AM+ AM
Sbjct: 384 GGWIHVYIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAM 443
Query: 411 HGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLK 469
HGHG+ I F ++ + +P+ ++F + L AC H+G + G FF+ M Y V P K
Sbjct: 444 HGHGRAAIDLFSKMQETKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGVVPGSK 503
Query: 470 HYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIEL 529
HY CMVD+L RAG L EA E I+K+P+ P + +WGALLG C +GN+E ++A RL+E
Sbjct: 504 HYACMVDILGRAGCLEEAVELIEKMPIVPSASVWGALLGACRIYGNVELAEMACSRLLET 563
Query: 530 EPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRS 589
+ NN G YV+L+N++A AG+W ++R RQ MK + K PGCS IE IH+F D S
Sbjct: 564 DSNNHGAYVLLSNIYAKAGKWDCVSRLRQHMKVSGLEKEPGCSSIEVNGIIHEFLVGDNS 623
Query: 590 HDRSEEIYTIID 601
H S EIY+ +D
Sbjct: 624 HPLSTEIYSKLD 635
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 115/418 (27%), Positives = 181/418 (43%), Gaps = 50/418 (11%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y G LD A VF + E+D VSWNS+++ G EAL+ +RM
Sbjct: 176 YSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPEEALQLFKRM------------ 223
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
+ E PN T+ VL ACA+ L G+ YI
Sbjct: 224 ------------------------KMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIE 259
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
RNG N + N ++D+Y +CG + A ++F K K+ VS T+I GY + G+ AR
Sbjct: 260 RNGIDINLILSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARR 319
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
+FD M + I +WN++IS Y N EA ++FR+L + +P T S L AC
Sbjct: 320 VFDVMP----REDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAAC 375
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK 301
A + ++ G IH G++ + + +L++MY + L A F +E + +
Sbjct: 376 AQLGAMDLGGWIHVYIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWS 435
Query: 302 MKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVH-----A 356
G + + A+ LFS+M + P+ T +L ACS ++ G+
Sbjct: 436 AMIAGLAMHGHGRAAIDLFSKMQETKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPV 495
Query: 357 YAIRCGYDSDVHIGTALVDMYAKCGSLKHA-RLAYKRISTPDLVSQNAMLTAYAMHGH 413
Y + G +VD+ + G L+ A L K P A+L A ++G+
Sbjct: 496 YGVVPGSKH----YACMVDILGRAGCLEEAVELIEKMPIVPSASVWGALLGACRIYGN 549
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 116/485 (23%), Positives = 208/485 (42%), Gaps = 73/485 (15%)
Query: 93 NARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIF 152
N T+ ++ CA + L K+ H ++ R G +P SA K+F
Sbjct: 29 NPSTVPILIDKCANKKHL---KQLHAHMLRTGLFFDP----------------PSATKLF 69
Query: 153 SKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYD 212
+ ++ + S + A ++FDQ+ + + +WN++I + +
Sbjct: 70 TACALSSPSSLDY-------------ACKVFDQIP----RPNLYTWNTLIRAFASSPKPI 112
Query: 213 EAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGAL 272
+ +F +L P S+TF V+ A +++SL G+ IH + + SD F+ +L
Sbjct: 113 QGLLVFIQMLHESQRFPNSYTFPFVIKAATEVSSLLAGQAIHGMVMKASFGSDLFISNSL 172
Query: 273 VEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDI 332
+ Y DL +A + F +I + + GF A+QLF M + P+
Sbjct: 173 IHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPEEALQLFKRMKMENARPNR 232
Query: 333 YTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKR 392
T+ +LSAC+ +E G+ Y R G D ++ + A++DMY KCGSL+ AR + +
Sbjct: 233 VTMVGVLSACAKRIDLEFGRWACDYIERNGIDINLILSNAMLDMYVKCGSLEDARRLFDK 292
Query: 393 ISTPDLVS-------------------------------QNAMLTAYAMHGHGKEGIAHF 421
+ D+VS NA++++Y +G KE +A F
Sbjct: 293 MEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNALISSYQQNGKPKEALAIF 352
Query: 422 RRI-LASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSR 480
R + L +P+ ++ S L+AC G++ G + +K + T ++D+ S+
Sbjct: 353 RELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQGIKLNFHITTSLIDMYSK 412
Query: 481 AGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTG-NYVM 539
G L +A E + D +W A++ G HG+ G+ A D +++ N V
Sbjct: 413 CGHLEKALEVFYSVERR-DVFVWSAMIAGLAMHGH---GRAAIDLFSKMQETKVKPNAVT 468
Query: 540 LANLF 544
NL
Sbjct: 469 FTNLL 473
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 143/290 (49%), Gaps = 11/290 (3%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGSL+DA+++F M E+D VSW +++ A G A + M D +
Sbjct: 276 MYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPRED-----IT 330
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQA-EGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
+W+A+I + QNG +EA+ + +Q + +PN TL+S L ACA+L + LG H Y
Sbjct: 331 AWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVY 390
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
I + G N + L+D+Y +CG + AL++F ++ + +I G +G+ A
Sbjct: 391 IKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAMHGHGRAA 450
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
+LF +M+ V+ +++ +++ + L DE F + G+ P S + ++
Sbjct: 451 IDLFSKMQETKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGVVPGSKHYACMVD 510
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCR-YQDLVAAQMA 288
L + E L + + V GAL+ CR Y ++ A+MA
Sbjct: 511 ILGRAGCLEEAVE---LIEKMPIVPSASVWGALLGA-CRIYGNVELAEMA 556
>gi|449432255|ref|XP_004133915.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Cucumis sativus]
gi|449480068|ref|XP_004155790.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Cucumis sativus]
Length = 638
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 181/562 (32%), Positives = 299/562 (53%), Gaps = 27/562 (4%)
Query: 48 RMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARL 107
R + LD++ P L W+AVI ++ A+ + M G + + S +L ACAR+
Sbjct: 82 RRNHLDDD-PFL--WNAVIKSYSHGNEPVRALVLFCMMLENGFCVDKFSFSLILKACARV 138
Query: 108 QKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTII 167
+ GK+ HG + + SN F++N L+ +Y RCGD+ A ++F + I++ VS N++I
Sbjct: 139 CLVEEGKQIHGLLMKLEIGSNLFLLNCLIAMYLRCGDIEFARQVFDRMPIQDSVSYNSMI 198
Query: 168 VGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNS----LYDEAFSMF--RDL 221
GY ++G + ARELFD M + +ISWNSM+ G+ L E F RDL
Sbjct: 199 DGYVKSGTIDLARELFDSMPL--EDKNLISWNSMLGGFAQTKDGIGLALELFEKMPERDL 256
Query: 222 LMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQD 281
+ + I G + A + N + K D +++ Y + D
Sbjct: 257 VSWNTIIGGFAKCGRIEFAHSLFNRMPK--------------RDVISWSNMIDGYAKLGD 302
Query: 282 LVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEML-SLDLTPDIYTVGIILS 340
+ A+ FDE+ + + + G+ N Y A+++F EM +L+PD T+ + LS
Sbjct: 303 IKVARTLFDEMPDKDVVAFNTIMAGYAQNGYYTEALEIFHEMQRQSNLSPDETTLVVALS 362
Query: 341 ACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVS 400
A S L +E+ +H Y + G + AL+DMY+KCGS+++A L + + +
Sbjct: 363 AISQLGHVEKAASMHNYFLENGISVTGKVAVALIDMYSKCGSIENAILIFDGVDQKGIDH 422
Query: 401 QNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM- 459
NAM++ A +G GK + +PD I+F+ L+AC HAG +K G F+LM
Sbjct: 423 WNAMISGMARNGLGKLAFGMLLEMHRLSVKPDGITFIGVLNACAHAGLVKEGLICFELMR 482
Query: 460 AYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFG 519
+ ++P L+HY CMVD+L +AG + A +FI+++P+ P+ ++W LL C +H N G
Sbjct: 483 KVHKLEPKLQHYGCMVDILGKAGLVEGALKFIEEMPIEPNDIIWRTLLSACQNHENFTIG 542
Query: 520 QIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDE 579
++ A L+ ++ N+ +YV+L+N++A G WS ++ R MK + + K PGCSWIE
Sbjct: 543 ELIAKHLMTMDSCNSSSYVLLSNIYARLGLWSAASKVRMMMKKQNLTKVPGCSWIELEGV 602
Query: 580 IHKFRASDRSHDRSEEIYTIID 601
+H+F D+SH EIY+++D
Sbjct: 603 VHEFLVRDKSHPYVSEIYSVLD 624
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 122/284 (42%), Gaps = 52/284 (18%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
+ KCG ++ A +F MP+RD +SW++++ A G + A + M D +V+
Sbjct: 266 FAKCGRIEFAHSLFNRMPKRDVISWSNMIDGYAKLGDIKVARTLFDEMPDKD-----VVA 320
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
++ ++ G+ QNGY EA+ + MQ + L P+ TL L A ++L + H Y
Sbjct: 321 FNTIMAGYAQNGYYTEALEIFHEMQRQSNLSPDETTLVVALSAISQLGHVEKAASMHNYF 380
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
NG V L+D+Y +CG + +A+ IF
Sbjct: 381 LENGISVTGKVAVALIDMYSKCGSIENAILIFDGVD------------------------ 416
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
Q+GI WN+MISG N L AF M + + R ++P TF VL A
Sbjct: 417 -----------QKGIDHWNAMISGMARNGLGKLAFGMLLE-MHRLSVKPDGITFIGVLNA 464
Query: 241 CADMNSLRKG-------KEIHALAIAL---GLQSDTFVGGALVE 274
CA +++G +++H L L G D LVE
Sbjct: 465 CAHAGLVKEGLICFELMRKVHKLEPKLQHYGCMVDILGKAGLVE 508
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 154/356 (43%), Gaps = 55/356 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +CG ++ A++VF MP +D VS+NS++ +G + A E + M E NL+
Sbjct: 169 MYLRCGDIEFARQVFDRMPIQDSVSYNSMIDGYVKSGTIDLARELFDSMPL---EDKNLI 225
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW++++GGF Q ++ IG+ + + E + + ++++ A+ ++ +
Sbjct: 226 SWNSMLGGFAQT---KDGIGLALELFEKMPERDLVSWNTIIGGFAKCGRIEFAHSLFNRM 282
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ +S + ++D Y + GD+ A +F + K+ V+ NTI+ GY +NG EA
Sbjct: 283 PKRDVIS----WSNMIDGYAKLGDIKVARTLFDEMPDKDVVAFNTIMAGYAQNGYYTEAL 338
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
E+F +M+ + + P T L A
Sbjct: 339 EIFHEMQR-----------------------------------QSNLSPDETTLVVALSA 363
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFD-----EIENI 295
+ + + K +H + G+ V AL++MY + + A + FD I++
Sbjct: 364 ISQLGHVEKAASMHNYFLENGISVTGKVAVALIDMYSKCGSIENAILIFDGVDQKGIDHW 423
Query: 296 ENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG 351
++ M +G A + EM L + PD T +L+AC+ ++ G
Sbjct: 424 NAMISGMARNGLGK-----LAFGMLLEMHRLSVKPDGITFIGVLNACAHAGLVKEG 474
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 77/187 (41%), Gaps = 41/187 (21%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNS-------------------------------- 28
MY KCGS+++A +F + ++ WN+
Sbjct: 398 MYSKCGSIENAILIFDGVDQKGIDHWNAMISGMARNGLGKLAFGMLLEMHRLSVKPDGIT 457
Query: 29 ---VVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRM 85
V+ ACA GLV E L C E M + P L + ++ + G E A+ + M
Sbjct: 458 FIGVLNACAHAGLVKEGLICFELMRKVHKLEPKLQHYGCMVDILGKAGLVEGALKFIEEM 517
Query: 86 QAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI-TRNGFMSNPFVVNGLVDVYRRCGD 144
+EPN ++L AC + ++G+ ++ T + S+ +V+ L ++Y R G
Sbjct: 518 P---IEPNDIIWRTLLSACQNHENFTIGELIAKHLMTMDSCNSSSYVL--LSNIYARLGL 572
Query: 145 MLSALKI 151
+A K+
Sbjct: 573 WSAASKV 579
>gi|147779768|emb|CAN71727.1| hypothetical protein VITISV_003014 [Vitis vinifera]
Length = 1167
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 180/588 (30%), Positives = 290/588 (49%), Gaps = 103/588 (17%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y CG L + K+F+ MP R N +S
Sbjct: 662 YSDCGKLSSSFKLFQKMPLR------------------------------------NAIS 685
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W+ +I G NG ++A+ +L +MQ E +E + TL S++P C + L G HGY
Sbjct: 686 WNTLISGCVHNGDTKKAVALLHKMQQEKMELDLVTLISIIPICRVXENLIQGMTLHGYAI 745
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
+ GF + +VN L+ +Y CGD + +
Sbjct: 746 KTGFACDVSLVNALISMYFNCGD-------------------------------INAGKF 774
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
LF+ M R I+SWN++I+GY + L +E + F ++ +G +P T ++L +C
Sbjct: 775 LFEVMP----WRSIVSWNALITGYRFHYLQNEVMASFCQMIX-EGQKPNYVTLLNLLPSC 829
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK 301
+L +GK IHA A+ G+ +T + +L+ MY R++++ + F
Sbjct: 830 X---TLLQGKSIHAFAVRTGVIVETPIITSLISMYARFENINSFIFLF------------ 874
Query: 302 MKEDGFEPNVYTWNAMQ--------------LFSEMLSLDLTPDIYTVGIILSACSSLAT 347
E G + ++ WNA+ F E+L + PD T ++SAC L++
Sbjct: 875 --EMGGKEDIALWNAIMSVYVQTKNAKESVTFFCELLHARVEPDYITFLSLISACVQLSS 932
Query: 348 MERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTA 407
+ V AY I+ G+D + I AL+D++A+CG++ A+ ++ +S+ D VS + M+
Sbjct: 933 LNLSNSVMAYVIQKGFDKHIVISNALIDLFARCGNISIAKKIFEGLSSKDAVSWSTMING 992
Query: 408 YAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPS 467
Y +HG + +A ++ SG +PD I++ S LSAC H G I G F+ M V
Sbjct: 993 YGLHGDSEAALALLSQMRLSGMKPDGITYASVLSACSHGGFIDQGWMIFNSMVEEGVPRR 1052
Query: 468 LKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLI 527
++HY CMVDLL R G+L EAY+F++K+P P + +LL C+ HGN++ G+ L
Sbjct: 1053 MEHYACMVDLLGRTGQLNEAYDFVEKLPCKPSVSLLESLLXACIIHGNVKLGEKICSLLF 1112
Query: 528 ELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIE 575
EL+P N+G+YVML N++A AGRW D R R M++R++ K PG S +E
Sbjct: 1113 ELDPKNSGSYVMLYNIYAAAGRWMDANRVRSDMEERQLRKIPGFSLVE 1160
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 134/517 (25%), Positives = 229/517 (44%), Gaps = 119/517 (23%)
Query: 14 VFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNG 73
V + E + V ++V A G +++A L+++S P+LV+W+A+I G++ NG
Sbjct: 371 VLRTAFEENLVIQTALVDFYAKTGRMVKARLVLDKISQ-----PDLVTWNALISGYSLNG 425
Query: 74 YDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVN 133
+D+E +L ++ GL+PN T +S++P C R++ L +GK HG++ ++GF S+ F+
Sbjct: 426 FDKEVFEVLRQILEMGLKPNVSTFASIIPLCTRMKCLDIGKSIHGFVVKSGFSSDEFLTP 485
Query: 134 GLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQR 193
L+ +Y GN+ AR+LFD ++
Sbjct: 486 ALISMY-------------------------------AGGGNLFIARDLFDS----AAEK 510
Query: 194 GIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEI 253
++ WNSMIS Y N EAF MF+ +L + ++P TF S++ C + + GK +
Sbjct: 511 NVVIWNSMISAYAQNQKSSEAFKMFQQML-KANMQPNVVTFVSIIPCCENSANFWXGKSL 569
Query: 254 HALAIALGLQSDTFVGGALVEMYCRYQDLVAA-----QMA-------------------- 288
HA + L S V AL+ MY + D +A QM
Sbjct: 570 HAHVMKYRLDSQLSVATALLSMYAKLGDXNSAXFIFYQMPRKTSYRDSMISGYGIMSMGR 629
Query: 289 ------------------FDEIENIENLL-------GKMKEDG--FEP----NVYTWN-- 315
FD NI N L GK+ F+ N +WN
Sbjct: 630 PFFWVRLLMHLAIKTGKEFDSXLNISNALLAFYSDCGKLSSSFKLFQKMPLRNAISWNTL 689
Query: 316 ------------AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGY 363
A+ L +M + D+ T+ I+ C + +G +H YAI+ G+
Sbjct: 690 ISGCVHNGDTKKAVALLHKMQQEKMELDLVTLISIIPICRVXENLIQGMTLHGYAIKTGF 749
Query: 364 DSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRR 423
DV + AL+ MY CG + + ++ + +VS NA++T Y H E +A F +
Sbjct: 750 ACDVSLVNALISMYFNCGDINAGKFLFEVMPWRSIVSWNALITGYRFHYLQNEVMASFCQ 809
Query: 424 ILASGFRPDHISFLSALSAC--------VHAGSIKTG 452
++ G +P++++ L+ L +C +HA +++TG
Sbjct: 810 MIXEGQKPNYVTLLNLLPSCXTLLQGKSIHAFAVRTG 846
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 123/523 (23%), Positives = 222/523 (42%), Gaps = 85/523 (16%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVT----AC---AANGLVLEALECLERMSSLD 53
++ C ++++ K + ++ RD + VV +C A L L A E +E+
Sbjct: 253 LFDLCRNIENLKPLGSVLIVRDLMRDEYVVAEFIISCFHLGAPELALSAFEAIEK----- 307
Query: 54 NETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLG 113
P++ + +I +G E+ + + + + G + T V+ AC+ L + +
Sbjct: 308 ---PSVFLQNLMIRRLCDHGLFEDVLCVYLKCRVLGCPSDDFTFPFVIKACSALGAVWIA 364
Query: 114 KEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCEN 173
+ H + R F N + LVD Y + G M+ A + K S
Sbjct: 365 EGVHCIVLRTAFEENLVIQTALVDFYAKTGRMVKARLVLDKIS----------------- 407
Query: 174 GNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFT 233
Q +++WN++ISGY N E F + R +L G++P T
Sbjct: 408 ------------------QPDLVTWNALISGYSLNGFDKEVFEVLRQIL-EMGLKPNVST 448
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
F S++ C M L GK IH + G SD F+ AL+ MY +L A+ FD
Sbjct: 449 FASIIPLCTRMKCLDIGKSIHGFVVKSGFSSDEFLTPALISMYAGGGNLFIARDLFDSAA 508
Query: 294 NIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ 353
++ + N + A ++F +ML ++ P++ T I+ C + A GK
Sbjct: 509 EKNVVIWNSMISAYAQNQKSSEAFKMFQQMLKANMQPNVVTFVSIIPCCENSANFWXGKS 568
Query: 354 VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVS-QNAMLTAYAMHG 412
+HA+ ++ DS + + TAL+ MYAK G A + ++ P S +++M++ Y +
Sbjct: 569 LHAHVMKYRLDSQLSVATALLSMYAKLGDXNSAXFIFYQM--PRKTSYRDSMISGYGIMS 626
Query: 413 HGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYT 472
G+ + R+L H++ IKTG EF L
Sbjct: 627 MGRPFF--WVRLLM------HLA-------------IKTGKEF---------DSXLNISN 656
Query: 473 CMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
++ S G+L +++ +K+P+ +++ W L+ GCV +G+
Sbjct: 657 ALLAFYSDCGKLSSSFKLFQKMPLR-NAISWNTLISGCVHNGD 698
Score = 46.6 bits (109), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 65/168 (38%), Gaps = 56/168 (33%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
++ +CG++ AKK+F+ + +D VSW
Sbjct: 961 LFARCGNISIAKKIFEGLSSKDAVSW---------------------------------- 986
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
S +I G+ +G E A+ +L +M+ G++P+ T +SVL AC+ G+I
Sbjct: 987 --STMINGYGLHGDSEAALALLSQMRLSGMKPDGITYASVLSACSH----------GGFI 1034
Query: 121 TRNGFMSNPFVVNG----------LVDVYRRCGDMLSALKIFSKFSIK 158
+ + N V G +VD+ R G + A K K
Sbjct: 1035 DQGWMIFNSMVEEGVPRRMEHYACMVDLLGRTGQLNEAYDFVEKLPCK 1082
>gi|357126882|ref|XP_003565116.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Brachypodium distachyon]
Length = 796
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 180/601 (29%), Positives = 301/601 (50%), Gaps = 69/601 (11%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +CG + +A++VF + ERD VSWNS+V+
Sbjct: 158 MYARCGDMGEARRVFDVTEERDDVSWNSLVS----------------------------- 188
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACA--RLQKLSLGKEFHG 118
G+ + G EE + + M+ + N+ L SV+ C+ + + HG
Sbjct: 189 -------GYLRVGAHEEMLRVFALMRRCAMGLNSFALGSVIKCCSGGDGSVRGIAEAVHG 241
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
+ + G ++ F+ + +VD+Y + G + A+ +F N V N +I G C +
Sbjct: 242 CVVKAGLDTDLFLASAMVDMYAKRGALSEAVALFKSVLDPNVVVFNAMIAGLCRD----- 296
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
V + EA S++ +L R G+EPT FTF SV+
Sbjct: 297 ------------------------EAAVHKEVVREALSLYSELQSR-GMEPTEFTFSSVI 331
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
AC + GK+IH + Q D F+G AL+++Y + F + + +
Sbjct: 332 RACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYFNSACMEDGFRCFRSVPKQDVV 391
Query: 299 LGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYA 358
G N A+ LF E+L + L PD +T+ +++AC+SLA + G+Q+ +A
Sbjct: 392 TWTAMISGCVQNELFERALALFHELLGVGLKPDPFTISSVMNACASLAVVRTGEQMQCFA 451
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGI 418
+ G+D +G + + MYA+ G+++ A ++ + + D+VS +A+++++A HG ++ +
Sbjct: 452 TKSGFDRFTAMGNSCIHMYARSGNVEAAIQRFQEMESHDVVSWSAIISSHAQHGCARQAL 511
Query: 419 AHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDL 477
F ++ + P+ I+FL L+AC H G + G ++++M Y + P++KH TC+VDL
Sbjct: 512 QFFNEMVGAKVVPNEITFLGVLTACSHGGLVDEGLRYYEIMKMEYGLCPTVKHCTCVVDL 571
Query: 478 LSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNY 537
L RAG L +A FI+ + V+W +LLG C H ++E GQ+ ADR++EL+P ++G Y
Sbjct: 572 LGRAGRLADAEAFIRDSIFHDEPVVWQSLLGSCRIHRDMERGQLVADRIMELQPASSGCY 631
Query: 538 VMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
V L N++ AG S ++ R MK+R + K PG SWIE R IH F A D+SH IY
Sbjct: 632 VNLYNMYLDAGELSLGSKIRDLMKERGVKKEPGLSWIELRSGIHSFVAGDKSHPECNAIY 691
Query: 598 T 598
T
Sbjct: 692 T 692
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 96/364 (26%), Positives = 173/364 (47%), Gaps = 15/364 (4%)
Query: 164 NTIIVGYCE--NGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDL 221
NT++ YC G+ +AR L D+M +R +S+N +I Y +E+ F
Sbjct: 49 NTLLAAYCRLGAGDTHQARRLLDEMP----RRNAVSFNLLIDAYSRAGQTEESLETFLHA 104
Query: 222 LMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQD 281
++ FT+ + L AC+ L++GK +HALA+ GL FV +LV MY R D
Sbjct: 105 HRAAEVKADRFTYAAALAACSRAGRLKEGKVVHALAVLEGLAEGVFVSNSLVSMYARCGD 164
Query: 282 LVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSA 341
+ A+ FD E +++ G+ +++F+ M + + + +G ++
Sbjct: 165 MGEARRVFDVTEERDDVSWNSLVSGYLRVGAHEEMLRVFALMRRCAMGLNSFALGSVIKC 224
Query: 342 CSSLATMERG--KQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLV 399
CS RG + VH ++ G D+D+ + +A+VDMYAK G+L A +K + P++V
Sbjct: 225 CSGGDGSVRGIAEAVHGCVVKAGLDTDLFLASAMVDMYAKRGALSEAVALFKSVLDPNVV 284
Query: 400 SQNAMLTAY-----AMHGH-GKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGS 453
NAM+ A+H +E ++ + + + G P +F S + AC AG I+ G
Sbjct: 285 VFNAMIAGLCRDEAAVHKEVVREALSLYSELQSRGMEPTEFTFSSVIRACNLAGDIEFGK 344
Query: 454 EFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSH 513
+ + + + + ++DL + + + + + +P D V W A++ GCV +
Sbjct: 345 QIHGQVLKHCFQGDDFIGSALIDLYFNSACMEDGFRCFRSVP-KQDVVTWTAMISGCVQN 403
Query: 514 GNLE 517
E
Sbjct: 404 ELFE 407
>gi|218184628|gb|EEC67055.1| hypothetical protein OsI_33800 [Oryza sativa Indica Group]
Length = 513
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 157/405 (38%), Positives = 234/405 (57%), Gaps = 1/405 (0%)
Query: 193 RGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKE 252
R + SW S+I+GY N + DEA + ++R +P FTF S+L A S G++
Sbjct: 4 RDMCSWTSLIAGYAQNDMPDEALGL-LLGMLRGRFKPNGFTFASLLKAAGASASSGIGEQ 62
Query: 253 IHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVY 312
IHAL + D +VG AL++MY R + A FD++E+ + GF
Sbjct: 63 IHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGD 122
Query: 313 TWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTA 372
+ +F+EM +T + SA + + +E+GK VHA+ I+ G +G
Sbjct: 123 GETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNT 182
Query: 373 LVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPD 432
++DMYAK GS+ AR + + DLV+ N+MLTA+A +G G+E + HF + G +
Sbjct: 183 ILDMYAKSGSMIDARKVFDHVDKKDLVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLN 242
Query: 433 HISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIK 492
I+FLS L+AC H G +K G ++FD+M ++++P + HY +VDLL RAG L +A FI
Sbjct: 243 QITFLSILTACSHGGLVKEGKQYFDMMKEHNLEPEIDHYVTVVDLLGRAGLLNDALVFIF 302
Query: 493 KIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSD 552
K+PM P + +WGALLG C H N + GQ AAD + EL+P++TG V+L N++A G+W
Sbjct: 303 KMPMKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQWDA 362
Query: 553 LARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
AR R+ MK + K P CSW+E + +H F A+D +H RSEEIY
Sbjct: 363 AARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIY 407
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 158/363 (43%), Gaps = 37/363 (10%)
Query: 56 TPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKE 115
T ++ SW+++I G+ QN +EA+G+L M +PN T +S+L A +G++
Sbjct: 3 TRDMCSWTSLIAGYAQNDMPDEALGLLLGMLRGRFKPNGFTFASLLKAAGASASSGIGEQ 62
Query: 116 FHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGN 175
H + + + +V + L+D+Y RCG M A+ +F + KN VS N +I G+ G+
Sbjct: 63 IHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGD 122
Query: 176 VAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFG 235
+F +M+ R+G E T FT+
Sbjct: 123 GETTLLMFAEMQ------------------------------------RNGFEATHFTYS 146
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
SV A A + +L +GK +HA I G + FVG +++MY + ++ A+ FD ++
Sbjct: 147 SVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDHVDKK 206
Query: 296 ENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVH 355
+ + F A+ F EM + + T IL+ACS ++ GKQ
Sbjct: 207 DLVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYF 266
Query: 356 AYAIRCGYDSDVHIGTALVDMYAKCGSLKHARL-AYKRISTPDLVSQNAMLTAYAMHGHG 414
+ ++ +VD+ + G L A + +K P A+L + MH +
Sbjct: 267 DMMKEHNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALLGSCRMHKNA 326
Query: 415 KEG 417
K G
Sbjct: 327 KIG 329
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 89/175 (50%), Gaps = 1/175 (0%)
Query: 55 ETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGK 114
E+ N VSW+A+I GF + G E + M MQ G E T SSV A A + L GK
Sbjct: 103 ESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGK 162
Query: 115 EFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
H ++ ++G + FV N ++D+Y + G M+ A K+F K+ V+ N+++ + + G
Sbjct: 163 WVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDHVDKKDLVTWNSMLTAFAQYG 222
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEP 229
EA F++M GV I++ S+++ L E F D++ +EP
Sbjct: 223 LGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYF-DMMKEHNLEP 276
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 53/106 (50%), Gaps = 1/106 (0%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K GS+ DA+KVF + ++D V+WNS++TA A GL EA+ E M N +
Sbjct: 186 MYAKSGSMIDARKVFDHVDKKDLVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHL-NQI 244
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACAR 106
++ +++ + G +E M+ LEP +V+ R
Sbjct: 245 TFLSILTACSHGGLVKEGKQYFDMMKEHNLEPEIDHYVTVVDLLGR 290
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 56/125 (44%), Gaps = 1/125 (0%)
Query: 393 ISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTG 452
+ST D+ S +++ YA + E + +L F+P+ +F S L A + S G
Sbjct: 1 MSTRDMCSWTSLIAGYAQNDMPDEALGLLLGMLRGRFKPNGFTFASLLKAAGASASSGIG 60
Query: 453 SEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVS 512
+ L YD + + ++D+ +R G + A ++ + + V W AL+ G
Sbjct: 61 EQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLE-SKNGVSWNALIAGFAR 119
Query: 513 HGNLE 517
G+ E
Sbjct: 120 KGDGE 124
>gi|297737063|emb|CBI26264.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 179/531 (33%), Positives = 271/531 (51%), Gaps = 74/531 (13%)
Query: 90 LEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNP---FVVNGLVDVYRRCGDML 146
L PN +L+S++ + Q LG+ H I + + NP F+ N LV++Y +
Sbjct: 4 LSPN--SLASLVESAVSTQCSRLGRAAHAQIIKT--LDNPLPSFIYNHLVNMYSKLDRPN 59
Query: 147 SALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYV 206
SA + S L R +++W ++I+G V
Sbjct: 60 SAQLLLS-----------------------------------LTPNRSVVTWTALIAGSV 84
Query: 207 DNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDT 266
N + A F ++ RD I+P FTF A + S GK++HALA+ G SD
Sbjct: 85 QNGRFTSALFHFSNM-RRDSIQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISDV 143
Query: 267 FVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNA---------- 316
FVG + +MY + A+ FDE+ E N+ TWNA
Sbjct: 144 FVGCSAFDMYSKAGLTEEARKMFDEMP--------------ERNIATWNAYLSNSVLEGR 189
Query: 317 ----MQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTA 372
+ F E + P + V +LSAC+ L+ +E GK VH A++ ++ +G+A
Sbjct: 190 YDDALTAFIEARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSA 249
Query: 373 LVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFR-- 430
LVDMY KCGS++ A A+ + +LV+ NAM+ YA G + F + R
Sbjct: 250 LVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVA 309
Query: 431 PDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMVDLLSRAGELGEAYE 489
P++++F+ LSAC AGS+ G E F+ M Y ++P +HY C+VDLL RAG + +AY+
Sbjct: 310 PNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQ 369
Query: 490 FIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGR 549
FIKK+P+ P +WGALLG G E G++AAD L EL+P ++GN+V+L+N+FA AGR
Sbjct: 370 FIKKMPIRPTVSVWGALLGASKMFGKSELGKVAADNLFELDPLDSGNHVLLSNMFAAAGR 429
Query: 550 WSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTII 600
W + R++MKD + K GCSWI + +H F+A D SH+R+ EI ++
Sbjct: 430 WEEATLVRKEMKDVGIKKGAGCSWITAGNAVHVFQAKDTSHERNSEIQAML 480
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 109/382 (28%), Positives = 169/382 (44%), Gaps = 70/382 (18%)
Query: 56 TPN--LVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLG 113
TPN +V+W+A+I G QNG A+ M+ + ++PN T A L+ +G
Sbjct: 68 TPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVG 127
Query: 114 KEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCEN 173
K+ H + G +S+ FV D+Y +
Sbjct: 128 KQVHALAVKAGQISDVFVGCSAFDMYSKA------------------------------- 156
Query: 174 GNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFT 233
G EAR++FD+M +R I +WN+ +S V YD+A + F + ++GIEPT F
Sbjct: 157 GLTEEARKMFDEMP----ERNIATWNAYLSNSVLEGRYDDALTAFIE-ARKEGIEPTDFM 211
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
SVL ACA ++ L GK +H LA+ + + FVG ALV+MY + + A+ AFDE+
Sbjct: 212 VSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMP 271
Query: 294 NIENLLGKMKEDGFEPNVYTWNAM--------------QLFSEML--SLDLTPDIYTVGI 337
E N+ TWNAM LF EM S + P+ T
Sbjct: 272 --------------ERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVC 317
Query: 338 ILSACSSLATMERGKQV-HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST- 395
+LSACS ++ G ++ + R G + +VD+ + G ++ A K++
Sbjct: 318 VLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIR 377
Query: 396 PDLVSQNAMLTAYAMHGHGKEG 417
P + A+L A M G + G
Sbjct: 378 PTVSVWGALLGASKMFGKSELG 399
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 103/241 (42%), Gaps = 40/241 (16%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G ++A+K+F MPER N+
Sbjct: 152 MYSKAGLTEEARKMFDEMPER------------------------------------NIA 175
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+A + G ++A+ + EG+EP +SSVL ACA L L +GK H
Sbjct: 176 TWNAYLSNSVLEGRYDDALTAFIEARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLA 235
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ + N FV + LVD+Y +CG + A + F + +N V+ N +I GY G A
Sbjct: 236 VKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAV 295
Query: 181 ELFDQMEHLGVQR---GIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSV 237
LFD+M G R +++ ++S + +F + R GIEP + + V
Sbjct: 296 TLFDEMT-CGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACV 354
Query: 238 L 238
+
Sbjct: 355 V 355
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 71/172 (41%), Gaps = 39/172 (22%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKCGS++DA++ F MPER+ V+WN
Sbjct: 253 MYGKCGSIEDAERAFDEMPERNLVTWN--------------------------------- 279
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQ--AEGLEPNARTLSSVLPACARLQKLSLGKE-FH 117
A+IGG+ G + A+ + M + + PN T VL AC+R +++G E F
Sbjct: 280 ---AMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFE 336
Query: 118 GYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVG 169
R G +VD+ R G + A + K I+ VS ++G
Sbjct: 337 SMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGALLG 388
>gi|147806113|emb|CAN65480.1| hypothetical protein VITISV_030746 [Vitis vinifera]
Length = 686
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 187/606 (30%), Positives = 297/606 (49%), Gaps = 115/606 (18%)
Query: 29 VVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAE 88
+VT CA + A + +++ PN+ W+++ G+ Q+ E + + F+M+
Sbjct: 139 LVTICATLKRMTYARQLFDQIPD-----PNIALWNSMFRGYAQSESYREVVFLFFQMKGM 193
Query: 89 GLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSA 148
+ PN T VL +C ++ L G++ H ++ + GF NPFV L+D+Y
Sbjct: 194 DIRPNCFTFPVVLKSCGKINALIEGEQVHCFLIKCGFRGNPFVGTTLIDMY--------- 244
Query: 149 LKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDN 208
G V +A ++F +M +R +++W SMI+GY
Sbjct: 245 ----------------------SAGGTVGDAYKIFCEM----FERNVVAWTSMINGY--- 275
Query: 209 SLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFV 268
I AD+ S R+ L + D +
Sbjct: 276 ------------------------------ILSADLVSARR-------LFDLAPERDVVL 298
Query: 269 GGALVEMYCRYQDLVAAQMAFDEIEN------------------IENLLGKMKEDGFEPN 310
+V Y D+V A+ F E+ N +E L G + E+ E N
Sbjct: 299 WNIMVSGYIEGGDMVEARKLFXEMPNRDVMFWNTVLKGYATNGNVEALEG-LFEEMPERN 357
Query: 311 VYTWNAM-------QLFSEML--------SLDLTPDIYTVGIILSACSSLATMERGKQVH 355
+++WNA+ LF E+L D+ P+ T+ +LSAC+ L ++ GK VH
Sbjct: 358 IFSWNALIGGYAHNGLFFEVLGSFKRMLSESDVPPNDATLVTVLSACARLGALDLGKWVH 417
Query: 356 AYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGK 415
YA G +V++G AL+DMYAKCG +++A ++ + T DL+S N ++ AMH G
Sbjct: 418 VYAESSGLKGNVYVGNALMDMYAKCGIIENAISVFRGMDTKDLISWNTLIGGLAMHSRGA 477
Query: 416 EGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCM 474
+ + F ++ +G +PD I+F+ L AC H G ++ G +F MA Y + P ++HY CM
Sbjct: 478 DALNLFFQMKNAGQKPDGITFIGILCACTHMGLVEDGFAYFQSMADDYLIMPQIEHYGCM 537
Query: 475 VDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNT 534
VD+L+RAG L +A F++K+P+ D V+W LLG C + N+E ++A RLIELEP N
Sbjct: 538 VDMLARAGRLEQAXAFVRKMPVEADGVIWAGLLGACRIYKNVELAELALQRLIELEPKNP 597
Query: 535 GNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSE 594
NYVML+N++ AGRW D+AR + M+D K PGCS IE D + +F + D H + E
Sbjct: 598 ANYVMLSNIYGDAGRWEDVARLKVAMRDTGFKKLPGCSLIEVNDAVVEFYSLDERHPQIE 657
Query: 595 EIYTII 600
EIY ++
Sbjct: 658 EIYGVL 663
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 96/299 (32%), Positives = 155/299 (51%), Gaps = 15/299 (5%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETP--NL 59
Y + G + +A+K+F MP RD + WN+V+ A NG V EALE L E P N+
Sbjct: 306 YIEGGDMVEARKLFXEMPNRDVMFWNTVLKGYATNGNV-EALE------GLFEEMPERNI 358
Query: 60 VSWSAVIGGFTQNGYDEEAIGMLFRMQAEG-LEPNARTLSSVLPACARLQKLSLGKEFHG 118
SW+A+IGG+ NG E +G RM +E + PN TL +VL ACARL L LGK H
Sbjct: 359 FSWNALIGGYAHNGLFFEVLGSFKRMLSESDVPPNDATLVTVLSACARLGALDLGKWVHV 418
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
Y +G N +V N L+D+Y +CG + +A+ +F K+ +S NT+I G + A+
Sbjct: 419 YAESSGLKGNVYVGNALMDMYAKCGIIENAISVFRGMDTKDLISWNTLIGGLAMHSRGAD 478
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
A LF QM++ G + I++ ++ L ++ F+ F+ + I P +G ++
Sbjct: 479 ALNLFFQMKNAGQKPDGITFIGILCACTHMGLVEDGFAYFQSMADDYLIMPQIEHYGCMV 538
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCR-YQDLVAAQMAFDEIENIE 296
A L + A + +++D + L+ CR Y+++ A++A + +E
Sbjct: 539 DMLARAGRLEQAX---AFVRKMPVEADGVIWAGLLGA-CRIYKNVELAELALQRLIELE 593
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 38/183 (20%), Positives = 69/183 (37%), Gaps = 37/183 (20%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG +++A VF+ M +D +SWN+
Sbjct: 438 MYAKCGIIENAISVFRGMDTKDLISWNT-------------------------------- 465
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+IGG + +A+ + F+M+ G +P+ T +L AC + + G + +
Sbjct: 466 ----LIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIGILCACTHMGLVEDGFAYFQSM 521
Query: 121 TRNGFMSNPFVVNG-LVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ + G +VD+ R G + A K ++ + ++G C E
Sbjct: 522 ADDYLIMPQIEHYGCMVDMLARAGRLEQAXAFVRKMPVEADGVIWAGLLGACRIYKNVEL 581
Query: 180 REL 182
EL
Sbjct: 582 AEL 584
>gi|125564656|gb|EAZ10036.1| hypothetical protein OsI_32340 [Oryza sativa Indica Group]
Length = 644
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 194/631 (30%), Positives = 319/631 (50%), Gaps = 77/631 (12%)
Query: 4 KCGSLDDAKKVFKMMPER--DCVSWNSVVTACA--ANGLVLEALECLERMSSLDNETPNL 59
+CGS+ ++ + D V+ + + CA A G V A + +R+ P+
Sbjct: 21 RCGSVHRLNQLHAHLVVHGVDDVTSQILASYCALPAGGGVWYARQLFDRIPD-----PDR 75
Query: 60 VSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
++++I + + +EA+ +L M G+ PN TL +L ACAR+Q HG
Sbjct: 76 FVYNSLIRAYCNSHCPQEALPLLRGMIRRGILPNEFTLPFLLKACARVQAWEHVMVTHGV 135
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ + GF+ FV N L+ Y G++ ++
Sbjct: 136 VVKLGFVGQVFVGNALLH-------------------------------SYASAGSLGDS 164
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
R FD+M V R ++SWNSMI+GY EA S+F + R G+ FT S+L
Sbjct: 165 RRFFDEM----VDRNVVSWNSMINGYAQAGNTREACSLFEGM-RRQGLLADEFTLVSLLF 219
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE-----N 294
AC+ +L GK +H+ + G + D + ALV+MY + DL+ A FD + +
Sbjct: 220 ACSAEGNLEFGKLVHSHLLVRGCRIDLILANALVDMYGKCGDLLMAHTCFDMMPFKNAVS 279
Query: 295 IENLLGKMKE--------DGFE----PNVYTWNAM--------------QLFSEMLSLDL 328
++L + + D FE ++ +WNAM L++ M L L
Sbjct: 280 WTSMLCALAKRASIDAARDWFEQIPEKSIISWNAMISCYVQGGRFHEALDLYNRMKLLGL 339
Query: 329 TPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARL 388
PD +T+ +LSAC L + GK +H ++ V + +L+DMYA+CG + A
Sbjct: 340 APDEFTLAAVLSACGQLGDLASGKMIHDCIRDNFHNPGVALFNSLLDMYARCGQVDTAIS 399
Query: 389 AYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGS 448
+ + + +++S NA++ A AMHG ++ + FR +++ F PD I+F++ LSAC H G
Sbjct: 400 LFSEMPSKNVISWNAIIGALAMHGRAQDALMFFRSMVSDAFPPDEITFVALLSACNHGGL 459
Query: 449 IKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALL 507
++ G +F M + Y+VKP ++HY CMVDLL R G+L +A + IK +PM PD V+WGALL
Sbjct: 460 LEAGQYYFQAMRHVYNVKPGVEHYACMVDLLGRGGQLAKAVDLIKDMPMRPDVVVWGALL 519
Query: 508 GGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHK 567
G C HG+++ G+ +L+ELE + G +V+++N+ +W D+ R R+ M++ M K
Sbjct: 520 GACRIHGHIQIGKQVIKQLLELEGMSGGLFVLISNMLYETHQWEDMKRLRKLMREWGMKK 579
Query: 568 SPGCSWIEDRDEIHKFRASDRSHDRSEEIYT 598
+ G S IE IH+ A H+ S+++Y
Sbjct: 580 NMGVSSIETNSNIHESGAEGIGHESSDDMYV 610
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 122/444 (27%), Positives = 189/444 (42%), Gaps = 79/444 (17%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y GSL D+++ F M +R+ VSWNS
Sbjct: 155 YASAGSLGDSRRFFDEMVDRNVVSWNS--------------------------------- 181
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
+I G+ Q G EA + M+ +GL + TL S+L AC+ L GK H ++
Sbjct: 182 ---MINGYAQAGNTREACSLFEGMRRQGLLADEFTLVSLLFACSAEGNLEFGKLVHSHLL 238
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
G + + N LVD+Y +CGD+L A F KN VS +++ + ++ AR+
Sbjct: 239 VRGCRIDLILANALVDMYGKCGDLLMAHTCFDMMPFKNAVSWTSMLCALAKRASIDAARD 298
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
F+Q+ ++ IISWN+MIS YV + EA ++ + + G+ P FT +VL AC
Sbjct: 299 WFEQIP----EKSIISWNAMISCYVQGGRFHEALDLYNRMKLL-GLAPDEFTLAAVLSAC 353
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK 301
+ L GK IH + +L++MY R + A F E+ +
Sbjct: 354 GQLGDLASGKMIHDCIRDNFHNPGVALFNSLLDMYARCGQVDTAISLFSEMPS------- 406
Query: 302 MKEDGFEPNVYTWN--------------AMQLFSEMLSLDLTPDIYTVGIILSACSSLAT 347
NV +WN A+ F M+S PD T +LSAC+
Sbjct: 407 -------KNVISWNAIIGALAMHGRAQDALMFFRSMVSDAFPPDEITFVALLSACNHGGL 459
Query: 348 MERGKQV-----HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST-PDLVSQ 401
+E G+ H Y ++ G V +VD+ + G L A K + PD+V
Sbjct: 460 LEAGQYYFQAMRHVYNVKPG----VEHYACMVDLLGRGGQLAKAVDLIKDMPMRPDVVVW 515
Query: 402 NAMLTAYAMHGHGKEGIAHFRRIL 425
A+L A +HGH + G +++L
Sbjct: 516 GALLGACRIHGHIQIGKQVIKQLL 539
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 107/417 (25%), Positives = 184/417 (44%), Gaps = 43/417 (10%)
Query: 137 DVYRRCGDMLSALKIFSKFSIK--NEVSCNTIIVGYCE---NGNVAEARELFDQMEHLGV 191
++ RRCG + ++ + + ++V+ + I+ YC G V AR+LFD++
Sbjct: 17 ELLRRCGSVHRLNQLHAHLVVHGVDDVT-SQILASYCALPAGGGVWYARQLFDRIP---- 71
Query: 192 QRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGK 251
+NS+I Y ++ EA + R ++ R GI P FT +L ACA + +
Sbjct: 72 DPDRFVYNSLIRAYCNSHCPQEALPLLRGMI-RRGILPNEFTLPFLLKACARVQAWEHVM 130
Query: 252 EIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNV 311
H + + LG FVG AL+ Y L ++ FDE+ + + +G+
Sbjct: 131 VTHGVVVKLGFVGQVFVGNALLHSYASAGSLGDSRRFFDEMVDRNVVSWNSMINGYAQAG 190
Query: 312 YTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGT 371
T A LF M L D +T+ +L ACS+ +E GK VH++ + G D+ +
Sbjct: 191 NTREACSLFEGMRRQGLLADEFTLVSLLFACSAEGNLEFGKLVHSHLLVRGCRIDLILAN 250
Query: 372 ALVDMYAKCG-------------------------------SLKHARLAYKRISTPDLVS 400
ALVDMY KCG S+ AR +++I ++S
Sbjct: 251 ALVDMYGKCGDLLMAHTCFDMMPFKNAVSWTSMLCALAKRASIDAARDWFEQIPEKSIIS 310
Query: 401 QNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA 460
NAM++ Y G E + + R+ G PD + + LSAC G + +G D +
Sbjct: 311 WNAMISCYVQGGRFHEALDLYNRMKLLGLAPDEFTLAAVLSACGQLGDLASGKMIHDCIR 370
Query: 461 YYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
P + + ++D+ +R G++ A ++P + + + W A++G HG +
Sbjct: 371 DNFHNPGVALFNSLLDMYARCGQVDTAISLFSEMP-SKNVISWNAIIGALAMHGRAQ 426
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 159/349 (45%), Gaps = 60/349 (17%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKCG L A F MMP ++ VSW S++ A A + A + E++ +++
Sbjct: 255 MYGKCGDLLMAHTCFDMMPFKNAVSWTSMLCALAKRASIDAARDWFEQIPE-----KSII 309
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+A+I + Q G EA+ + RM+ GL P+ TL++VL AC +L L+ GK H I
Sbjct: 310 SWNAMISCYVQGGRFHEALDLYNRMKLLGLAPDEFTLAAVLSACGQLGDLASGKMIHDCI 369
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTII------------- 167
N + N L+D+Y RCG + +A+ +FS+ KN +S N II
Sbjct: 370 RDNFHNPGVALFNSLLDMYARCGQVDTAISLFSEMPSKNVISWNAIIGALAMHGRAQDAL 429
Query: 168 ---------------------VGYCENGNVAEARE-LFDQMEHL-GVQRGIISWNSMISG 204
+ C +G + EA + F M H+ V+ G+ + M+
Sbjct: 430 MFFRSMVSDAFPPDEITFVALLSACNHGGLLEAGQYYFQAMRHVYNVKPGVEHYACMVDL 489
Query: 205 YVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQS 264
+A + +D+ MR P +G++L AC ++ GK++ I L+
Sbjct: 490 LGRGGQLAKAVDLIKDMPMR----PDVVVWGALLGACRIHGHIQIGKQV----IKQLLEL 541
Query: 265 DTFVGGALVEMYCRYQDLVAAQMAFD--EIENIENLLGKMKEDGFEPNV 311
+ GG V + + M ++ + E+++ L M+E G + N+
Sbjct: 542 EGMSGGLFV---------LISNMLYETHQWEDMKRLRKLMREWGMKKNM 581
>gi|359476188|ref|XP_002283446.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25970-like [Vitis vinifera]
Length = 829
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 181/600 (30%), Positives = 301/600 (50%), Gaps = 74/600 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC ++DA +VFK + R N V
Sbjct: 144 MYAKCERVEDAFEVFKSINIR------------------------------------NSV 167
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+A+I G+ Q G A +L M+ EG+E + T + +L L + H I
Sbjct: 168 TWNALISGYAQVGDRGTAFWLLDCMELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKI 227
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
++G S+ V CN II Y E G++ +A
Sbjct: 228 VKHGLASDTTV-------------------------------CNAIITAYSECGSIEDAE 256
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+FD R +++WNSM++ Y+ N+ +EAF +F ++ + G EP +T+ SV+ A
Sbjct: 257 RVFDGAIE---TRDLVTWNSMLAAYLVNNQEEEAFQLFLEMQVL-GFEPDIYTYTSVISA 312
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRY--QDLVAAQMAFDEIENIENL 298
+ + +GK +H L I GL+ + +L+ MY + + + A F+ +EN +++
Sbjct: 313 AFEGSHQGQGKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESLENKDHV 372
Query: 299 LGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYA 358
GF + + +A++ F M S + D Y +L +CS LAT++ G+QVH
Sbjct: 373 SWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVHVLV 432
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGI 418
++ G++ + + ++L+ MY+KCG ++ AR ++ ++ N+++ YA HG GK +
Sbjct: 433 LKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDATPKDSSIAWNSLIFGYAQHGRGKIAL 492
Query: 419 AHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMVDL 477
F + + DHI+F++ L+AC H G ++ G F M + Y + P ++HY CM+DL
Sbjct: 493 DLFFLMKDRRVKLDHITFVAVLTACSHIGLVEEGWSFLKSMESDYGIPPRMEHYACMIDL 552
Query: 478 LSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNY 537
L RAG L EA I+ +P PD+++W LLG C + G++E A L+ELEP Y
Sbjct: 553 LGRAGRLDEAKALIEAMPFEPDAMVWKTLLGACRTCGDIELASQVASHLLELEPEEHCTY 612
Query: 538 VMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
V+L+++F + RW++ A ++ MK+R + K PG SWIE ++E+ F A DRSH EEIY
Sbjct: 613 VLLSSMFGHLRRWNEKASIKRLMKERGVKKVPGWSWIEVKNEVRSFNAEDRSHPNCEEIY 672
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 101/424 (23%), Positives = 173/424 (40%), Gaps = 86/424 (20%)
Query: 117 HGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNV 176
H ++G ++ + N ++ Y +CG++ A K+F + S ++ VS NT+I G+ GN
Sbjct: 22 HCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAGFVNLGNF 81
Query: 177 AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGS 236
A E M+ R G ++FGS
Sbjct: 82 ETALEFLKSMK------------------------------------RYGFAVDGYSFGS 105
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
+L A + + G+++H++ + +G + + F G AL++MY + + + A F I NI
Sbjct: 106 ILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGSALLDMYAKCERVEDAFEVFKSI-NIR 164
Query: 297 NLLGKMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSAC 342
N + TWNA+ L M + D T +L+
Sbjct: 165 NSV-------------TWNALISGYAQVGDRGTAFWLLDCMELEGVEIDDGTFAPLLTLL 211
Query: 343 SSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYK-RISTPDLVSQ 401
+ QVHA ++ G SD + A++ Y++CGS++ A + I T DLV+
Sbjct: 212 DDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVFDGAIETRDLVTW 271
Query: 402 NAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSAC-----------VHAGSIK 450
N+ML AY ++ +E F + GF PD ++ S +SA +H IK
Sbjct: 272 NSMLAAYLVNNQEEEAFQLFLEMQVLGFEPDIYTYTSVISAAFEGSHQGQGKSLHGLVIK 331
Query: 451 TGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGC 510
G EF ++ + LK ++ +D EA + + D V W ++L G
Sbjct: 332 RGLEFLVPISNSLIAMYLKSHSKSMD---------EALNIFESLE-NKDHVSWNSILTGF 381
Query: 511 VSHG 514
G
Sbjct: 382 SQSG 385
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 79/173 (45%), Gaps = 1/173 (0%)
Query: 343 SSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQN 402
SS + R H AI+ G + ++ ++ YAKCG ++ A + S D VS N
Sbjct: 10 SSFTALYRASVNHCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWN 69
Query: 403 AMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYY 462
M+ + G+ + + + + GF D SF S L G ++ G + +M
Sbjct: 70 TMIAGFVNLGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKM 129
Query: 463 DVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
+ ++ + ++D+ ++ + +A+E K I + +SV W AL+ G G+
Sbjct: 130 GYEGNVFAGSALLDMYAKCERVEDAFEVFKSINI-RNSVTWNALISGYAQVGD 181
>gi|79475105|ref|NP_193221.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122236284|sp|Q0WSH6.1|PP312_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g14850; AltName: Full=Protein LOVASTATIN INSENSITIVE
1
gi|110735893|dbj|BAE99922.1| hypothetical protein [Arabidopsis thaliana]
gi|332658109|gb|AEE83509.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 684
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 178/555 (32%), Positives = 299/555 (53%), Gaps = 51/555 (9%)
Query: 56 TP--NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLG 113
TP N+VSW+++I G QNG+ A+ F M+ EG+ PN T A A L+ G
Sbjct: 68 TPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTG 127
Query: 114 KEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCEN 173
K+ H + G ++DV+ C SA ++ K ++++
Sbjct: 128 KQIHALAVKCG---------RILDVFVGC----SAFDMYCKTRLRDD------------- 161
Query: 174 GNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFT 233
AR+LFD++ +R + +WN+ IS V + EA F + DG P S T
Sbjct: 162 -----ARKLFDEIP----ERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDG-HPNSIT 211
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
F + L AC+D L G ++H L + G +D V L++ Y + + + ++++ F E+
Sbjct: 212 FCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEM- 270
Query: 294 NIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDI-----YTVGIILSACSSLATM 348
+N + Y N + +L L DI + + +LSAC+ +A +
Sbjct: 271 GTKNAVSWCSLVA----AYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGL 326
Query: 349 ERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAY 408
E G+ +HA+A++ + + +G+ALVDMY KCG ++ + A+ + +LV++N+++ Y
Sbjct: 327 ELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGY 386
Query: 409 AMHGHGKEGIAHFRRILASGF--RPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVK 465
A G +A F + G P++++F+S LSAC AG+++ G + FD M + Y ++
Sbjct: 387 AHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIE 446
Query: 466 PSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADR 525
P +HY+C+VD+L RAG + AYEFIKK+P+ P +WGAL C HG + G +AA+
Sbjct: 447 PGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAEN 506
Query: 526 LIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRA 585
L +L+P ++GN+V+L+N FA AGRW++ R+++K + K G SWI ++++H F+A
Sbjct: 507 LFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQA 566
Query: 586 SDRSHDRSEEIYTII 600
DRSH ++EI T +
Sbjct: 567 KDRSHILNKEIQTTL 581
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 122/296 (41%), Gaps = 67/296 (22%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSW-----NSV------------------------VT 31
MY K DDA+K+F +PER+ +W NSV +T
Sbjct: 152 MYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSIT 211
Query: 32 ACA--------------------------------ANGLVLEALECLERMSS----LDNE 55
CA NGL+ +C + SS +
Sbjct: 212 FCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMG 271
Query: 56 TPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKE 115
T N VSW +++ + QN DE+A + R + + +E + +SSVL ACA + L LG+
Sbjct: 272 TKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRS 331
Query: 116 FHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGN 175
H + + FV + LVD+Y +CG + + + F + KN V+ N++I GY G
Sbjct: 332 IHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQ 391
Query: 176 VAEARELFDQM--EHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEP 229
V A LF++M G +++ S++S + +F + GIEP
Sbjct: 392 VDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEP 447
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 98/204 (48%), Gaps = 9/204 (4%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLD-NETPNL 59
MYGKCG ++D+++ F MPE++ V+ NS++ A G V AL E M+ TPN
Sbjct: 354 MYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNY 413
Query: 60 VSWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEFHG 118
+++ +++ ++ G E + + M++ G+EP A S ++ R + EF
Sbjct: 414 MTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEF-- 471
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGD-MLSALKIFSKFSIKNEVSCNTIIVG--YCENGN 175
I + V L + R G L L + F + + S N +++ + G
Sbjct: 472 -IKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGR 530
Query: 176 VAEARELFDQMEHLGVQRGI-ISW 198
AEA + ++++ +G+++G SW
Sbjct: 531 WAEANTVREELKGVGIKKGAGYSW 554
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 90/221 (40%), Gaps = 37/221 (16%)
Query: 335 VGIILSACSSLATMERGKQVHAYAIRCGYDSDV--HIGTALVDMYAKCGSLKHARLAYKR 392
+G++L S ++M G+ VHA ++ DS + L++MY+K + ARL +
Sbjct: 9 LGLLLKNAISASSMRLGRVVHARIVKT-LDSPPPPFLANYLINMYSKLDHPESARLVLRL 67
Query: 393 ISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSAC--------- 443
++VS ++++ A +GH + F + G P+ +F A A
Sbjct: 68 TPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTG 127
Query: 444 --VHAGSIK--------TGSEFFDLMA----------YYDVKP--SLKHYTCMVD---LL 478
+HA ++K G FD+ +D P +L+ + +
Sbjct: 128 KQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTD 187
Query: 479 SRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFG 519
R E EA+ ++I P+S+ + A L C +L G
Sbjct: 188 GRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLG 228
>gi|222629201|gb|EEE61333.1| hypothetical protein OsJ_15451 [Oryza sativa Japonica Group]
Length = 1037
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 182/604 (30%), Positives = 300/604 (49%), Gaps = 76/604 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY K G++ DAK +F ++P +D +S
Sbjct: 480 MYSKYGAIGDAKALFSLIPYKDSIS----------------------------------- 504
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
W+A+ G QN +EEA+ ML RM+ G+ P+ + S+ + AC+ ++ GK+ H
Sbjct: 505 -WNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLA 563
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G SN V + L+D+Y + GD V +R
Sbjct: 564 IKYGICSNHAVGSSLIDLYSKHGD-------------------------------VESSR 592
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
++F Q++ I+ N++I+G+V N+ DEA +F+ +L +DG++P+S TF S+L
Sbjct: 593 KIFAQVD----ASSIVPINALIAGFVQNNNEDEAIQLFQQVL-KDGLKPSSVTFSSILSG 647
Query: 241 CADMNSLRKGKEIHALAIALG-LQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
C+ + GK++H + G L DT +G +L +Y + + L A E+ + +NL
Sbjct: 648 CSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLF 707
Query: 300 GKMKE-DGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYA 358
G+ N Y +++ F M ++ D T +L ACS + GK++H
Sbjct: 708 EWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFADGKEIHGLI 767
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTP-DLVSQNAMLTAYAMHGHGKEG 417
+ G+ S +AL+DMY+KCG + + A+K + D++ N+M+ +A +G+ E
Sbjct: 768 TKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKNGYADEA 827
Query: 418 IAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMVD 476
+ F+++ +PD ++FL L AC H+G I G FF M Y + P L HY C +D
Sbjct: 828 LLLFQKMEELQIKPDEVTFLGVLIACTHSGLISEGRHFFGSMRKVYGLTPRLDHYACFID 887
Query: 477 LLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGN 536
LL R G L EA E I ++P PD V+W L C H + E G+IAA +L+ELEP +
Sbjct: 888 LLGRGGHLQEAQEAIDQLPFRPDGVVWATYLAACRMHKDEERGKIAARKLVELEPQYSST 947
Query: 537 YVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEI 596
YV+L++L A G W++ TR+ M+++ + K PGCSWI ++ F D+ H + I
Sbjct: 948 YVLLSSLHAATGNWAEAKVTRESMREKGVAKFPGCSWITVGNKTSLFLVQDKYHPDNLRI 1007
Query: 597 YTII 600
Y ++
Sbjct: 1008 YEML 1011
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 139/555 (25%), Positives = 257/555 (46%), Gaps = 87/555 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDN------ 54
MY KCG + +A++VF + D + W+S++ G EAL RM + +
Sbjct: 212 MYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVT 271
Query: 55 ------------------------ETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGL 90
TP+ V+W+AVI G Q+G + +G+ M++ GL
Sbjct: 272 LVTIISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGL 331
Query: 91 EPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALK 150
P T +S+L A A ++ G++ H +G +N FV + L+++Y +CG
Sbjct: 332 WPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCG------- 384
Query: 151 IFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSL 210
C ++A+ +FD L ++ I+ WN+M++G+V N L
Sbjct: 385 --------------------CP----SDAKNVFD----LSCEKNIVMWNAMLTGFVQNEL 416
Query: 211 YDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGG 270
+EA MF+ +MR ++ FTF S+L AC ++S GK++H + I + FV
Sbjct: 417 PEEAIRMFQ-YMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVAN 475
Query: 271 ALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTP 330
A ++MY +Y + A+ F I +++ G N+ A+ + M +TP
Sbjct: 476 ATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITP 535
Query: 331 DIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAY 390
D + ++ACS++ E GKQ+H AI+ G S+ +G++L+D+Y+K G ++ +R +
Sbjct: 536 DDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIF 595
Query: 391 KRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSAC------- 443
++ +V NA++ + + + E I F+++L G +P ++F S LS C
Sbjct: 596 AQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSA 655
Query: 444 ----VHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPD 499
VH ++K+G + D + + + ++ L +A + + ++P +
Sbjct: 656 IGKQVHCYTLKSGVLYDDTLLGVS----------LAGIYLKSKMLEDANKLLTEMPDHKN 705
Query: 500 SVMWGALLGGCVSHG 514
W A++ G +G
Sbjct: 706 LFEWTAIISGYAQNG 720
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 129/475 (27%), Positives = 230/475 (48%), Gaps = 40/475 (8%)
Query: 89 GLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSA 148
G P+ L+ VL AC+R+ L+ G++ H + ++GF S+ F LVD+Y +CGD+ +A
Sbjct: 163 GGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNA 222
Query: 149 LKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLG------------------ 190
++F + + + +++I Y G EA LF +M+ +G
Sbjct: 223 RRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLASS 282
Query: 191 -------------VQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRD-GIEPTSFTFGS 236
++WN++ISG+ + L +++D MR G+ PT TF S
Sbjct: 283 GRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKD--MRSWGLWPTRSTFAS 340
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
+L A A+M + +G+++HA A+ GL ++ FVG +L+ +Y + A+ FD
Sbjct: 341 MLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKN 400
Query: 297 NLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHA 356
++ GF N A+++F M+ L D +T IL AC+ L++ GKQVH
Sbjct: 401 IVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHC 460
Query: 357 YAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKE 416
I+ D + + A +DMY+K G++ A+ + I D +S NA+ A + +E
Sbjct: 461 VTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEE 520
Query: 417 GIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVD 476
+ +R+ G PD +SF +A++AC + + +TG + L Y + + + ++D
Sbjct: 521 AVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLID 580
Query: 477 LLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE-----FGQIAADRL 526
L S+ G++ + + ++ A V AL+ G V + N + F Q+ D L
Sbjct: 581 LYSKHGDVESSRKIFAQVD-ASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGL 634
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 102/420 (24%), Positives = 175/420 (41%), Gaps = 73/420 (17%)
Query: 164 NTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLM 223
++++ YC++G V A + + + G +R + +S++S + + + FR +
Sbjct: 105 DSLVELYCKSGRVGYA---WSALGYAG-ERASGAASSLLSCHARSGSPGDVLGAFRYIRC 160
Query: 224 RDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLV 283
G P F VL AC+ + L G+++H + G S F ALV+MY + D+
Sbjct: 161 TAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVP 220
Query: 284 AAQMAFDEIENIEN---------------------LLGKMKEDGFEPNVYT--------- 313
A+ FD I + L +M + G P+ T
Sbjct: 221 NARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLA 280
Query: 314 ----------------------WNA--------------MQLFSEMLSLDLTPDIYTVGI 337
WNA + L+ +M S L P T
Sbjct: 281 SSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFAS 340
Query: 338 ILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPD 397
+LSA +++ G+Q+HA A+ G D++V +G++L+++YAKCG A+ + +
Sbjct: 341 MLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKN 400
Query: 398 LVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFD 457
+V NAMLT + + +E I F+ ++ + D +F+S L AC + S G +
Sbjct: 401 IVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHC 460
Query: 458 LMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLE 517
+ + SL +D+ S+ G +G+A IP DS+ W AL G NLE
Sbjct: 461 VTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYK-DSISWNALTVGLAQ--NLE 517
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 69/158 (43%), Gaps = 2/158 (1%)
Query: 352 KQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMH 411
+ +H +R G +G +LV++Y K G + +A A + +++L+ +A
Sbjct: 86 RALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARS 145
Query: 412 GHGKEGIAHFRRI-LASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKH 470
G + + FR I +G RPD LSAC G + G + + S+
Sbjct: 146 GSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFC 205
Query: 471 YTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLG 508
+VD+ ++ G++ A I PD++ W +++
Sbjct: 206 EAALVDMYAKCGDVPNARRVFDGI-ACPDTICWSSMIA 242
>gi|359483750|ref|XP_002269533.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g20770-like [Vitis vinifera]
Length = 847
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 200/701 (28%), Positives = 325/701 (46%), Gaps = 120/701 (17%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWN---------------------------------- 27
Y K L+DA +F MPER+ VSWN
Sbjct: 81 YCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGFEQKALGVYYRMSREGFVPTHFTL 140
Query: 28 -SVVTACAANGLVLEALECLERMSS------LDNET------------------------ 56
SV++AC A L +EC R LDN
Sbjct: 141 ASVLSACGA----LVDVECGRRCHGISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFG 196
Query: 57 ----PNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACAR------ 106
PN VS++A++GG + EA + M + ++ +LSSVL C+R
Sbjct: 197 DVPEPNEVSFTAMMGGLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEF 256
Query: 107 --------LQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIK 158
L G++ H ++GF S+ + N L+D+Y + G+M SA IF
Sbjct: 257 GLHDSNDVLSSDVHGQQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEV 316
Query: 159 NEVSCNTIIVGYCENGNVAEARELFDQMEHLG---------------VQRGII------- 196
+ VS N +I GY + ++A E +M++ G ++ G I
Sbjct: 317 SVVSWNVMIAGYGQKSQSSKAIEYLQRMQYHGFEPDEITYVNMLVACIKSGDIEAGRQMF 376
Query: 197 ---------SWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSL 247
SWN+++SGY N + EA +FR++ R + P T +L + A M L
Sbjct: 377 DGMSSPSLSSWNTILSGYSQNENHKEAVKLFREMQFR-SVHPDRTTLAIILSSLAGMMLL 435
Query: 248 RKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGF 307
G+++HA++ ++D ++ L+ MY + + A+ FD I ++ + G
Sbjct: 436 EGGRQVHAVSQKAVFRTDIYLASGLIGMYSKCGKVEMAKRIFDRIAELDIVCWNSMMAGL 495
Query: 308 EPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDV 367
N A F +M + P ++ +LS C+ L+++ +G+QVH+ R GY +D
Sbjct: 496 SLNSLDKEAFTFFKKMREKGMFPSQFSYATVLSCCAKLSSLSQGRQVHSQIAREGYMNDA 555
Query: 368 HIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILAS 427
+G+AL+DMY+KCG + AR + + + V+ N M+ YA +G G E + + ++ S
Sbjct: 556 FVGSALIDMYSKCGDVDAARWVFDMMLGKNTVTWNEMIHGYAQNGCGDEAVLLYEDMIGS 615
Query: 428 GFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGE 486
G +PD I+F++ L+AC H+G + TG + F+ M + V+P + HYTC++D L RAG L E
Sbjct: 616 GEKPDGITFVAVLTACSHSGLVDTGIKIFNSMQQEHGVEPLVDHYTCIIDSLGRAGRLHE 675
Query: 487 AYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAY 546
A I K+P D ++W LL C + ++ + AA+ L L+P N+ YV+LAN+++
Sbjct: 676 AEVLIDKMPCKYDPIIWEVLLSSCRVYADVSLARRAAEELFHLDPQNSAPYVLLANIYSS 735
Query: 547 AGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASD 587
GRW D R+ M ++ K PG SWIE ++ + F D
Sbjct: 736 LGRWDDAKAVRELMSYNQVVKDPGYSWIEHKNGMQAFMVDD 776
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 148/596 (24%), Positives = 269/596 (45%), Gaps = 128/596 (21%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTA-CAANGLVLEALECLERMSSLDNETP--N 58
Y KC ++D ++++F MP+RD +WN+++ A C A+ L E L E P N
Sbjct: 50 YAKCNAIDASRRLFDQMPKRDIYTWNAILGAYCKASEL--------EDAHVLFAEMPERN 101
Query: 59 LVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHG 118
+VSW+ +I T+NG++++A+G+ +RM EG P TL+SVL AC L + G+ HG
Sbjct: 102 IVSWNTLISALTRNGFEQKALGVYYRMSREGFVPTHFTLASVLSACGALVDVECGRRCHG 161
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
+ G +N +V N L+ +Y +C + A++ F NEVS ++ G ++ V
Sbjct: 162 ISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGDVPEPNEVSFTAMMGGLADSDQV-- 219
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
+EAF +FR L++R+ I S + SVL
Sbjct: 220 ---------------------------------NEAFRLFR-LMLRNRIHVDSVSLSSVL 245
Query: 239 IACAD--------------MNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVA 284
C+ ++S G+++H L I G +SD + +L++MY + ++ +
Sbjct: 246 GVCSRGGCGEFGLHDSNDVLSSDVHGQQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDS 305
Query: 285 AQMAFDEIENIE---------------------NLLGKMKEDGFEPNVYT---------- 313
A+M F + + L +M+ GFEP+ T
Sbjct: 306 AEMIFVNMPEVSVVSWNVMIAGYGQKSQSSKAIEYLQRMQYHGFEPDEITYVNMLVACIK 365
Query: 314 ---------------------WN--------------AMQLFSEMLSLDLTPDIYTVGII 338
WN A++LF EM + PD T+ II
Sbjct: 366 SGDIEAGRQMFDGMSSPSLSSWNTILSGYSQNENHKEAVKLFREMQFRSVHPDRTTLAII 425
Query: 339 LSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDL 398
LS+ + + +E G+QVHA + + + +D+++ + L+ MY+KCG ++ A+ + RI+ D+
Sbjct: 426 LSSLAGMMLLEGGRQVHAVSQKAVFRTDIYLASGLIGMYSKCGKVEMAKRIFDRIAELDI 485
Query: 399 VSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDL 458
V N+M+ +++ KE F+++ G P S+ + LS C S+ G +
Sbjct: 486 VCWNSMMAGLSLNSLDKEAFTFFKKMREKGMFPSQFSYATVLSCCAKLSSLSQGRQVHSQ 545
Query: 459 MAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
+A + ++D+ S+ G++ +A ++ + + ++V W ++ G +G
Sbjct: 546 IAREGYMNDAFVGSALIDMYSKCGDV-DAARWVFDMMLGKNTVTWNEMIHGYAQNG 600
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 118/448 (26%), Positives = 216/448 (48%), Gaps = 26/448 (5%)
Query: 90 LEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSAL 149
+E L+S+L C + GK H ++ R+ + F+ N L++ Y +C + ++
Sbjct: 1 METKTTYLASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASR 60
Query: 150 KIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNS 209
++F + ++ + N I+ YC+ + +A LF +M +R I+SWN++IS N
Sbjct: 61 RLFDQMPKRDIYTWNAILGAYCKASELEDAHVLFAEMP----ERNIVSWNTLISALTRNG 116
Query: 210 LYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVG 269
+A ++ + R+G PT FT SVL AC + + G+ H ++I +GL ++ +VG
Sbjct: 117 FEQKALGVYYRM-SREGFVPTHFTLASVLSACGALVDVECGRRCHGISIKIGLDNNIYVG 175
Query: 270 GALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLT 329
AL+ MY + + + A AF ++ + G + A +LF ML +
Sbjct: 176 NALLGMYAKCRCIGDAIQAFGDVPEPNEVSFTAMMGGLADSDQVNEAFRLFRLMLRNRIH 235
Query: 330 PDIYTVGIILSACSS--------------LATMERGKQVHAYAIRCGYDSDVHIGTALVD 375
D ++ +L CS L++ G+QVH I+ G++SD+H+ +L+D
Sbjct: 236 VDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSDVHGQQVHCLTIKHGFESDLHLNNSLLD 295
Query: 376 MYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHIS 435
MYAK G++ A + + + +VS N M+ Y + I + +R+ GF PD I+
Sbjct: 296 MYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQKSQSSKAIEYLQRMQYHGFEPDEIT 355
Query: 436 FLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKI- 494
+++ L AC+ +G I+ G + FD M+ PSL + ++ S+ EA + +++
Sbjct: 356 YVNMLVACIKSGDIEAGRQMFDGMS----SPSLSSWNTILSGYSQNENHKEAVKLFREMQ 411
Query: 495 --PMAPDSVMWGALLGGCVSHGNLEFGQ 520
+ PD +L LE G+
Sbjct: 412 FRSVHPDRTTLAIILSSLAGMMLLEGGR 439
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 105/424 (24%), Positives = 193/424 (45%), Gaps = 67/424 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMS---------- 50
MY K G++D A+ +F MPE VSWN ++ +A+E L+RM
Sbjct: 296 MYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQKSQSSKAIEYLQRMQYHGFEPDEIT 355
Query: 51 ----------SLDNE----------TPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGL 90
S D E +P+L SW+ ++ G++QN +EA+ + MQ +
Sbjct: 356 YVNMLVACIKSGDIEAGRQMFDGMSSPSLSSWNTILSGYSQNENHKEAVKLFREMQFRSV 415
Query: 91 EPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALK 150
P+ TL+ +L + A + L G++ H + F ++ ++ +GL+ +Y +CG + A +
Sbjct: 416 HPDRTTLAIILSSLAGMMLLEGGRQVHAVSQKAVFRTDIYLASGLIGMYSKCGKVEMAKR 475
Query: 151 IFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSL 210
IF + + + V N+++ G N SL
Sbjct: 476 IFDRIAELDIVCWNSMMAGLSLN-----------------------------------SL 500
Query: 211 YDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGG 270
EAF+ F+ + + G+ P+ F++ +VL CA ++SL +G+++H+ G +D FVG
Sbjct: 501 DKEAFTFFKKMREK-GMFPSQFSYATVLSCCAKLSSLSQGRQVHSQIAREGYMNDAFVGS 559
Query: 271 ALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTP 330
AL++MY + D+ AA+ FD + + G+ N A+ L+ +M+ P
Sbjct: 560 ALIDMYSKCGDVDAARWVFDMMLGKNTVTWNEMIHGYAQNGCGDEAVLLYEDMIGSGEKP 619
Query: 331 DIYTVGIILSACSSLATMERGKQV-HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLA 389
D T +L+ACS ++ G ++ ++ G + V T ++D + G L A +
Sbjct: 620 DGITFVAVLTACSHSGLVDTGIKIFNSMQQEHGVEPLVDHYTCIIDSLGRAGRLHEAEVL 679
Query: 390 YKRI 393
++
Sbjct: 680 IDKM 683
>gi|297736926|emb|CBI26127.3| unnamed protein product [Vitis vinifera]
Length = 603
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 181/579 (31%), Positives = 298/579 (51%), Gaps = 24/579 (4%)
Query: 42 ALECLERMSS---LDNETP--NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNART 96
AL L R++S L +E P + V+W+A++ ++Q G ++A+ + M+ P+ T
Sbjct: 14 ALAKLGRITSARRLFDEMPHKDTVAWNAMLASYSQLGLHQQALCLFHHMRIANSRPDRFT 73
Query: 97 LSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFS 156
++ L ACA L +L G + H + +G S+ V N L+D+Y +C SA ++F + S
Sbjct: 74 FTATLSACAGLGELRRGMKIHAQVVVSGCQSSLPVGNSLIDMYGKCLSATSARRVFEEMS 133
Query: 157 IKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFS 216
I NEVS +++ Y +G AR +FD M ++ I+WN MISGY +
Sbjct: 134 IMNEVSWCSLLFAYTSSGLFDVARVVFDGMP----KKVEIAWNIMISGYGQCGDVELCLG 189
Query: 217 MFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFV-------- 268
+F+ + D ++P +TF +++ A ++ G +H I G V
Sbjct: 190 LFKKM-REDSLQPDQWTFSALVNALCELQEPSYGYMMHGFIIKSGWDDVMKVFESIGILT 248
Query: 269 ---GGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLS 325
A+++ + + D A + F + G+ N + A+ F +M+
Sbjct: 249 QVSWNAMIDAHMKIGDTHEAFLVFQLAPEKNVVSWTSMITGYARNGHGEQALSFFVKMME 308
Query: 326 LDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKH 385
+ PD +T G +L ACSSLAT+ GK +H I G+ + V +G LV+MYAKCG ++
Sbjct: 309 NHIQPDDFTFGAVLHACSSLATLGHGKMIHGSIIHYGFHAYVDVGNGLVNMYAKCGDIQG 368
Query: 386 ARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVH 445
+ A+K I DLVS NAML MHGH + + + ++ASG +PD ++F+ L C H
Sbjct: 369 SNTAFKEILGKDLVSWNAMLFGLGMHGHATQALELYEEMVASGMKPDKVTFIGLLMTCSH 428
Query: 446 AGSIKTGSEFFD-LMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMA--PDSVM 502
+G I+ G F+ +++ Y + +H CMVDLL R G L +A E + + ++ +
Sbjct: 429 SGLIEKGQALFESMVSVYGLSQETEHVVCMVDLLGRGGYLAQARELVDEYSRTGRAETSL 488
Query: 503 WGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKD 562
ALLG C +H + G + L EP +YV+L+NL+ +G+W + R+ M D
Sbjct: 489 PEALLGACFAHSEVRMGANLGEYLKVFEPQKEMSYVLLSNLYCVSGQWKEAEMVRKTMTD 548
Query: 563 RRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTIID 601
+ K PGCSWIE R+++ F A + SH EE+ I++
Sbjct: 549 HGVKKMPGCSWIEVRNKVTVFVAGNHSHPYMEELCKILN 587
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 121/421 (28%), Positives = 199/421 (47%), Gaps = 34/421 (8%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKC S A++VF+ M + VSW S++ A ++GL A + M +
Sbjct: 115 MYGKCLSATSARRVFEEMSIMNEVSWCSLLFAYTSSGLFDVARVVFDGMPKKVE-----I 169
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+ +I G+ Q G E +G+ +M+ + L+P+ T S+++ A LQ+ S G HG+I
Sbjct: 170 AWNIMISGYGQCGDVELCLGLFKKMREDSLQPDQWTFSALVNALCELQEPSYGYMMHGFI 229
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
++G+ DV +K+F I +VS N +I + + G+ EA
Sbjct: 230 IKSGW----------DDV----------MKVFESIGILTQVSWNAMIDAHMKIGDTHEAF 269
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+F L ++ ++SW SMI+GY N ++A S F +M + I+P FTFG+VL A
Sbjct: 270 LVFQ----LAPEKNVVSWTSMITGYARNGHGEQALSFFVK-MMENHIQPDDFTFGAVLHA 324
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C+ + +L GK IH I G + VG LV MY + D+ + AF EI + +
Sbjct: 325 CSSLATLGHGKMIHGSIIHYGFHAYVDVGNGLVNMYAKCGDIQGSNTAFKEILGKDLVSW 384
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
G + + A++L+ EM++ + PD T +L CS +E+G+ + +
Sbjct: 385 NAMLFGLGMHGHATQALELYEEMVASGMKPDKVTFIGLLMTCSHSGLIEKGQALFESMVS 444
Query: 361 C-GYDSDVHIGTALVDMYAKCGSLKHARL---AYKRISTPDLVSQNAMLTAYAMHGHGKE 416
G + +VD+ + G L AR Y R + A+L A H +
Sbjct: 445 VYGLSQETEHVVCMVDLLGRGGYLAQARELVDEYSRTGRAETSLPEALLGACFAHSEVRM 504
Query: 417 G 417
G
Sbjct: 505 G 505
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 69/154 (44%), Gaps = 1/154 (0%)
Query: 371 TALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFR 430
T+ + AK G + AR + + D V+ NAML +Y+ G ++ + F + + R
Sbjct: 9 TSKIVALAKLGRITSARRLFDEMPHKDTVAWNAMLASYSQLGLHQQALCLFHHMRIANSR 68
Query: 431 PDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEF 490
PD +F + LSAC G ++ G + + + SL ++D+ + A
Sbjct: 69 PDRFTFTATLSACAGLGELRRGMKIHAQVVVSGCQSSLPVGNSLIDMYGKCLSATSARRV 128
Query: 491 IKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAAD 524
+++ + + V W +LL S G + ++ D
Sbjct: 129 FEEMSIM-NEVSWCSLLFAYTSSGLFDVARVVFD 161
Score = 45.4 bits (106), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 84/199 (42%), Gaps = 10/199 (5%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG + + FK + +D VSWN+++ +G +ALE E M + P+ V
Sbjct: 359 MYAKCGDIQGSNTAFKEILGKDLVSWNAMLFGLGMHGHATQALELYEEMVA-SGMKPDKV 417
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRM-QAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
++ ++ + +G E+ + M GL + ++ R L+ +E
Sbjct: 418 TFIGLLMTCSHSGLIEKGQALFESMVSVYGLSQETEHVVCMVDLLGRGGYLAQARELVDE 477
Query: 120 ITRNGF--MSNPFVVNGLVDVY---RRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
+R G S P + G + R ++ LK+F + E+S + YC +G
Sbjct: 478 YSRTGRAETSLPEALLGACFAHSEVRMGANLGEYLKVFEP---QKEMSYVLLSNLYCVSG 534
Query: 175 NVAEARELFDQMEHLGVQR 193
EA + M GV++
Sbjct: 535 QWKEAEMVRKTMTDHGVKK 553
>gi|302815813|ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
gi|300142765|gb|EFJ09463.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
Length = 736
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 177/545 (32%), Positives = 281/545 (51%), Gaps = 45/545 (8%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRM---QAEGLEPNARTLSSVLPACARLQKLSLGK 114
LV+W+A+I G+++NG A+ + M EG++P+A T SS L AC + +S G+
Sbjct: 124 TLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDISQGR 183
Query: 115 EFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
E +G+ S+ V N L+++Y +CG + SA K+F + ++ ++ NT+I GY + G
Sbjct: 184 EIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQG 243
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTF 234
+A ELF +M G D +P TF
Sbjct: 244 AATQALELFQRM-----------------GPNDP-------------------KPNVVTF 267
Query: 235 GSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCR-YQDLVAAQMAFDEIE 293
+L AC ++ L +G+ IH G +SD +G L+ MY + L A+ F+ +
Sbjct: 268 IGLLTACTNLEDLEQGRAIHRKVREDGYESDLVIGNVLLNMYTKCSSSLEEARQVFERMR 327
Query: 294 NIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ 353
+ + + + +A+ +F +M ++ P+ T+ +LSAC+ L +GK
Sbjct: 328 TRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKA 387
Query: 354 VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGH 413
VHA +DV + +L++MY +CGSL + I LVS + ++ AYA HGH
Sbjct: 388 VHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGH 447
Query: 414 GKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSE-FFDLMAYYDVKPSLKHYT 472
+ G+ HF +L G D ++ +S LSAC H G +K G + F ++ + + P +H+
Sbjct: 448 SRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQTFLSMVGDHGLAPDYRHFL 507
Query: 473 CMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPN 532
CMVDLLSRAG L A I +P PD+V W +LL GC H + + AD+L ELE
Sbjct: 508 CMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFELESE 567
Query: 533 NTGNYV-MLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHD 591
+ + V +L+N++A AGRW D+ +TR + R K+PGCS+IE D +H+F A D+SH
Sbjct: 568 DEHSTVTLLSNVYAEAGRWDDVRKTRNR---RAARKNPGCSYIEINDTVHEFVAGDKSHP 624
Query: 592 RSEEI 596
E I
Sbjct: 625 EEELI 629
Score = 218 bits (554), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 138/523 (26%), Positives = 239/523 (45%), Gaps = 76/523 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKCGS+ DA VF + E PN V
Sbjct: 1 MYGKCGSVADALAVFHAI------------------------------------EHPNSV 24
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
SW+ ++ F +NG+ EA+G RM EGL P+ + C+ + L G+ H I
Sbjct: 25 SWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMFVVAIGVCSSSKDLKQGQLLHAMI 84
Query: 121 TRNGFMSNPFVV-NGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ ++ L+ +Y RC D+ A
Sbjct: 85 LETRLLEFDIILGTALITMYARCRDL-------------------------------ELA 113
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMR--DGIEPTSFTFGSV 237
R+ FD+M ++ +++WN++I+GY N + A +++D++ + +G++P + TF S
Sbjct: 114 RKTFDEMG----KKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSA 169
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
L AC + + +G+EI A +A G SD+ V AL+ MY + L +A+ FD ++N +
Sbjct: 170 LYACTVVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDV 229
Query: 298 LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAY 357
+ G+ A++LF M D P++ T +L+AC++L +E+G+ +H
Sbjct: 230 IAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRK 289
Query: 358 AIRCGYDSDVHIGTALVDMYAKC-GSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKE 416
GY+SD+ IG L++MY KC SL+ AR ++R+ T D+++ N ++ AY +G K+
Sbjct: 290 VREDGYESDLVIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKD 349
Query: 417 GIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVD 476
+ F+++ P+ I+ + LSAC G+ + G L+A K + +++
Sbjct: 350 ALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMN 409
Query: 477 LLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFG 519
+ +R G L + I V W L+ HG+ G
Sbjct: 410 MYNRCGSLDDTVGVFAAI-RDKSLVSWSTLIAAYAQHGHSRTG 451
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 99/420 (23%), Positives = 173/420 (41%), Gaps = 75/420 (17%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGSL+ A+KVF + RD ++WN++++ A G +ALE +RM D
Sbjct: 207 MYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDP------ 260
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+PN T +L AC L+ L G+ H +
Sbjct: 261 ------------------------------KPNVVTFIGLLTACTNLEDLEQGRAIHRKV 290
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDML-SALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+G+ S+ + N L+++Y +C L A ++F + ++ ++ N +IV Y + G +A
Sbjct: 291 REDGYESDLVIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDA 350
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
++F QM+ + + P T +VL
Sbjct: 351 LDIFKQMQ------------------------------------LENVAPNEITLSNVLS 374
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
ACA + + R+GK +HAL + ++D + +L+ MY R L F I + +
Sbjct: 375 ACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVS 434
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
+ + ++ ++ F E+L L D T+ LSACS ++ G Q +
Sbjct: 435 WSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQTFLSMV 494
Query: 360 -RCGYDSDVHIGTALVDMYAKCGSLKHAR-LAYKRISTPDLVSQNAMLTAYAMHGHGKEG 417
G D +VD+ ++ G L+ A L + PD V+ ++L+ +H K
Sbjct: 495 GDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRA 554
>gi|449445041|ref|XP_004140282.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Cucumis sativus]
gi|449481162|ref|XP_004156100.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Cucumis sativus]
Length = 693
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 184/606 (30%), Positives = 295/606 (48%), Gaps = 80/606 (13%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KC DA K+F P+RD WN
Sbjct: 150 MYAKCDQFVDAIKLFDEFPQRDVGCWN--------------------------------- 176
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
AVI + ++G E A+ +M+ G EPN+ T + V+ +C RL L GKE H +
Sbjct: 177 ---AVISCYFKDGKAEMALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGKEVHREL 233
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ + FV++ LVD+Y +CG + A ++F K KN
Sbjct: 234 IERRILLDAFVLSALVDMYGKCGCLEMAKEVFEKIPRKNA-------------------- 273
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMR---DGIEPTSFTFGSV 237
I+WN+MI+GY SL ++ S +LLMR +G +PT T S+
Sbjct: 274 ---------------ITWNAMITGY---SLKGDSRSCI-ELLMRMNDEGTKPTLMTLTSI 314
Query: 238 LIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIEN 297
+ A + LR GK IH + + D F+ +L++ Y + + +A+ F I E
Sbjct: 315 IYASSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLIDFYFKCGYVSSAETIFRTISKNEV 374
Query: 298 LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAY 357
+ + G A+ ++ M + PD T LSACS LA +++G+++H
Sbjct: 375 VSWNVMISGHVMVGNHIQALHIYDNMKEHHVKPDALTFSSTLSACSQLAALDKGRELHYC 434
Query: 358 AIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEG 417
I +++ + AL+DMYAKCG + AR + ++ DLVS +M+ AY HG E
Sbjct: 435 IINHKLEANEIVMGALLDMYAKCGDVDEARKLFHQLPKRDLVSWTSMIFAYGSHGQASEA 494
Query: 418 IAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFF-DLMAYYDVKPSLKHYTCMVD 476
+ F + R D ++FL+ LSAC HAG + G +F +++ YD+KP ++HY+C++D
Sbjct: 495 LRLFDEMQKLNVRADSVTFLAVLSACSHAGLVDEGYMYFNEMVVQYDIKPGIEHYSCLID 554
Query: 477 LLSRAGELGEAYEFIKKIPMAPDSV-MWGALLGGCVSHGNLEFGQIAADRLIELEPNNTG 535
LL RAG L EAYE +++ + + L C+ H N G LIE++P++
Sbjct: 555 LLGRAGRLHEAYEILQRSKETRSDIGLLSTLFSACLLHNNFVLGIQIGKMLIEVDPDDPS 614
Query: 536 NYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEE 595
Y++L+N++A +W ++ + R+KMK+ + KSPGCSWIE IH F A D+S+ ++
Sbjct: 615 TYILLSNMYASVNKWDEVRKVRRKMKELGLKKSPGCSWIEINQRIHPFFAEDKSNPLADG 674
Query: 596 IYTIID 601
+Y ++
Sbjct: 675 VYECLN 680
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 122/478 (25%), Positives = 214/478 (44%), Gaps = 67/478 (14%)
Query: 54 NETPNLVS-WSAVIGGFTQNGYDEEAIGMLFRMQAEG-LEPNARTLSSVLPACARLQKLS 111
N+ P VS W+A++ +T N EA+ + ++ + P+ T VL AC L ++
Sbjct: 64 NDCPLDVSLWNALLSAYTNNFRFVEALQLFDQLNCNSYVRPDFYTYPVVLKACGGLGRVI 123
Query: 112 LGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYC 171
G+ H ++ + G + + FV + L+++Y +C + A+K+F +F
Sbjct: 124 YGRRIHNHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFP--------------- 168
Query: 172 ENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTS 231
QR + WN++IS Y + + A F D + G EP S
Sbjct: 169 --------------------QRDVGCWNAVISCYFKDGKAEMALKTF-DKMKELGFEPNS 207
Query: 232 FTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDE 291
TF V+ +C + +L +GKE+H I + D FV ALV+MY + L A+ F++
Sbjct: 208 VTFTVVVSSCTRLLNLERGKEVHRELIERRILLDAFVLSALVDMYGKCGCLEMAKEVFEK 267
Query: 292 IENIENLLGKMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGI 337
I N TWNAM +L M P + T+
Sbjct: 268 IP--------------RKNAITWNAMITGYSLKGDSRSCIELLMRMNDEGTKPTLMTLTS 313
Query: 338 ILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPD 397
I+ A S + GK +H Y +R D D+ I +L+D Y KCG + A ++ IS +
Sbjct: 314 IIYASSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLIDFYFKCGYVSSAETIFRTISKNE 373
Query: 398 LVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFD 457
+VS N M++ + M G+ + + + + +PD ++F S LSAC ++ G E
Sbjct: 374 VVSWNVMISGHVMVGNHIQALHIYDNMKEHHVKPDALTFSSTLSACSQLAALDKGRELHY 433
Query: 458 LMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
+ + ++ + ++D+ ++ G++ EA + ++P D V W +++ SHG
Sbjct: 434 CIINHKLEANEIVMGALLDMYAKCGDVDEARKLFHQLP-KRDLVSWTSMIFAYGSHGQ 490
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 132/279 (47%), Gaps = 3/279 (1%)
Query: 233 TFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEI 292
T S L C L++GK IH + G QS+ + +L+ Y D +A++ F
Sbjct: 5 TLLSALRTCTSSKLLKQGKLIHQRIFSCGFQSNIVLSKSLIGFYFSCHDYASAELVFQTN 64
Query: 293 E-NIENLLGKMKEDGFEPNVYTWNAMQLFSEM-LSLDLTPDIYTVGIILSACSSLATMER 350
+ ++ L + N A+QLF ++ + + PD YT ++L AC L +
Sbjct: 65 DCPLDVSLWNALLSAYTNNFRFVEALQLFDQLNCNSYVRPDFYTYPVVLKACGGLGRVIY 124
Query: 351 GKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAM 410
G+++H + ++ G DV +G++L++MYAKC A + D+ NA+++ Y
Sbjct: 125 GRRIHNHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAVISCYFK 184
Query: 411 HGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKH 470
G + + F ++ GF P+ ++F +S+C +++ G E + +
Sbjct: 185 DGKAEMALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGKEVHRELIERRILLDAFV 244
Query: 471 YTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
+ +VD+ + G L A E +KIP +++ W A++ G
Sbjct: 245 LSALVDMYGKCGCLEMAKEVFEKIP-RKNAITWNAMITG 282
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 100/235 (42%), Gaps = 38/235 (16%)
Query: 331 DIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAY 390
D T+ L C+S +++GK +H CG+ S++ + +L+ Y C A L +
Sbjct: 2 DYVTLLSALRTCTSSKLLKQGKLIHQRIFSCGFQSNIVLSKSLIGFYFSCHDYASAELVF 61
Query: 391 KRISTP-DLVSQNAMLTAYAMHGHGKEGIAHFRRILASGF-RPDHISFLSALSAC----- 443
+ P D+ NA+L+AY + E + F ++ + + RPD ++ L AC
Sbjct: 62 QTNDCPLDVSLWNALLSAYTNNFRFVEALQLFDQLNCNSYVRPDFYTYPVVLKACGGLGR 121
Query: 444 ------VHAGSIKTG------------------SEFFDLMAYYDVKPSLKHYTCMVDLLS 479
+H +KTG +F D + +D P + C ++S
Sbjct: 122 VIYGRRIHNHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQ-RDVGCWNAVIS 180
Query: 480 RAGELGEA------YEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIE 528
+ G+A ++ +K++ P+SV + ++ C NLE G+ LIE
Sbjct: 181 CYFKDGKAEMALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGKEVHRELIE 235
>gi|225450928|ref|XP_002280725.1| PREDICTED: pentatricopeptide repeat-containing protein At3g05340
[Vitis vinifera]
Length = 656
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 181/602 (30%), Positives = 293/602 (48%), Gaps = 74/602 (12%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +CG L DA KVF MP +D +SWNS ++ NG + +++
Sbjct: 98 MYSRCGELRDATKVFDHMPMKDTISWNSRISGLLGNGDIEMGFRVFKQL----------- 146
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+ + I F Q TL++VL AC + + + K H +
Sbjct: 147 -YESGIYQFDQ-----------------------ATLTTVLTACDKPEFCYVSKMIHSLV 182
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
G+ V N L+ Y RCG S ++F + S KN V+ +I
Sbjct: 183 FLYGYEREITVGNALITSYFRCGCCSSGRRVFDEMSEKNVVTWTAVI------------- 229
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDG-IEPTSFTFGSVLI 239
SG Y+E+ +F MRDG ++P S T+ S L+
Sbjct: 230 ----------------------SGLSQGQFYEESLKLFGK--MRDGPVDPNSLTYLSSLM 265
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
AC+ + ++R+G++IH L LG+ D + AL++MY + L A F+ E ++ +
Sbjct: 266 ACSGLQAIREGRQIHGLVWKLGVHFDLCIESALMDMYSKCGSLEDAWKIFESAEEVDEVS 325
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
+ G N + ++Q+F +M+ + D + IL ++ GKQ+H+ I
Sbjct: 326 MTVILVGLAQNGFEEESIQVFVKMVKNGVVIDPNMISAILGVFGIDTSLALGKQIHSLII 385
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
+ + S+ + L++MY+KCG L + + + + VS N+M+ A+A HG+G +
Sbjct: 386 KKSFGSNYFVNNGLINMYSKCGDLDDSIKIFCWMPQRNSVSWNSMIAAFARHGNGSRALQ 445
Query: 420 HFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLL 478
+ + G P ++FLS L AC H G ++ G F + MA Y + P ++HY C+VD++
Sbjct: 446 LYEEMRLEGVWPTDVTFLSLLHACAHVGLVEKGMGFLESMAKDYGIGPRMEHYACVVDMM 505
Query: 479 SRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYV 538
RAG L EA +FI+++P P ++W ALLG C HGN E G+ AA++L P + Y+
Sbjct: 506 GRAGLLNEAKKFIERLPEKPGILVWQALLGACSIHGNSEMGKYAANQLFLQAPESPAPYI 565
Query: 539 MLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYT 598
+LAN+++ G+W + ART +KMKD + K G SWIE +IH F DR H +E IY
Sbjct: 566 LLANIYSSEGKWKERARTIKKMKDMGVTKETGISWIEIEKQIHSFVVEDRMHPHAEIIYG 625
Query: 599 II 600
++
Sbjct: 626 VL 627
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 57/120 (47%), Gaps = 11/120 (9%)
Query: 335 VGIILSACSSLATMERGKQVHAYAIRC-----GYDSD-----VHIGTALVDMYAKCGSLK 384
+ +LS C + G +HA I+ G + D + + +L+ MY++CG L+
Sbjct: 47 ISFLLSLCGREGYLHLGSSLHASIIKNFGFLDGNNRDNLRNVIVVWNSLLSMYSRCGELR 106
Query: 385 HARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASG-FRPDHISFLSALSAC 443
A + + D +S N+ ++ +G + G F+++ SG ++ D + + L+AC
Sbjct: 107 DATKVFDHMPMKDTISWNSRISGLLGNGDIEMGFRVFKQLYESGIYQFDQATLTTVLTAC 166
>gi|357483095|ref|XP_003611834.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513169|gb|AES94792.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 985
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 176/544 (32%), Positives = 275/544 (50%), Gaps = 37/544 (6%)
Query: 54 NETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLG 113
NE N V+W+++I G+ +N E+ + + M G P T +L AC+RL+ G
Sbjct: 447 NERDN-VAWNSLILGYLKNDKIEKGVYLFIEMMWVGFTPTVYTFCMILSACSRLKDYFSG 505
Query: 114 KEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCEN 173
+ H + + + N LVD+Y C
Sbjct: 506 RLIHARVIVGNVSPDLHLQNALVDMY-------------------------------CNA 534
Query: 174 GNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFT 233
G+ A +F +ME + ++SWNSMISGY +N ++A ++F L +P +T
Sbjct: 535 GDTQTAYMIFSRME----KWDLVSWNSMISGYFENEDGEKAMNLFVQLKALCFPKPDDYT 590
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
+ ++ A GK +H I G FVG LV MY + Q+ AA F I
Sbjct: 591 YAGIISATGAFPCFSYGKPLHGQVIKAGFVRSVFVGSTLVSMYFKNQETEAALRVFCSIP 650
Query: 294 NIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ 353
+ +L G+ A++ FSEM D Y + +LS C+ LA + +G+
Sbjct: 651 GKDAILWTEMITGYSKMADGMGAIRCFSEMHHEVHEIDDYVLSGVLSVCAYLAILRQGEI 710
Query: 354 VHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGH 413
+H YA + GYD ++ + +L+DMYAK G+L+ A L + ++S PDL N+ML ++ HG
Sbjct: 711 IHCYAYKLGYDVEMSVSGSLIDMYAKNGNLEAAYLVFSQVSHPDLKCWNSMLGGFSHHGM 770
Query: 414 GKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTC 473
+ + F I+ G PD ++FLS LSAC H+ ++ G ++ M+ + P KHY+C
Sbjct: 771 VDDALKLFEEIIKQGLVPDQVTFLSLLSACSHSRLVEQGKLLWNYMSSIGLVPGPKHYSC 830
Query: 474 MVDLLSRAGELGEAYEFIKKIPMAPDSV-MWGALLGGCVSHGNLEFGQIAADRLIELEPN 532
MV LLSRA L EA E I K P D+V +W LL CV + NL+ G AA+ ++
Sbjct: 831 MVTLLSRAALLEEAEEIINKSPYVEDNVELWRTLLSACVINKNLKVGVRAAEEVLRFNAE 890
Query: 533 NTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDR 592
+ ++L+NL+A AGRW ++A R+ MK M K PG SWIE +++IH F + D+SH +
Sbjct: 891 DGPTLILLSNLYAAAGRWDEVAEIRRNMKGLIMEKEPGLSWIEAKNDIHVFSSGDQSHPK 950
Query: 593 SEEI 596
+++
Sbjct: 951 VDQV 954
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 136/518 (26%), Positives = 217/518 (41%), Gaps = 78/518 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY +CGSL+DA +VF MP+R VS+N+++ A + V
Sbjct: 326 MYSRCGSLEDAHQVFDKMPQRTHVSYNALLAAYSR------------------------V 361
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
S + F + +M+ GL P+ T++S+L A + L +G H
Sbjct: 362 SEQHCVYAFN----------LYTQMENMGLRPSNMTITSLLQAASLHGDLLIGLLLHAKS 411
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ GF+++ V L+++Y C D+ SA +F + ++ V+ N++I+GY +N + +
Sbjct: 412 LKFGFLNDICVQTSLLNMYSSCMDLSSAESVFCDMNERDNVAWNSLILGYLKNDKIEKGV 471
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LF +M M G PT +TF +L A
Sbjct: 472 YLFIEM------------------------------------MWVGFTPTVYTFCMILSA 495
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C+ + G+ IHA I + D + ALV+MYC D A M F +E + +
Sbjct: 496 CSRLKDYFSGRLIHARVIVGNVSPDLHLQNALVDMYCNAGDTQTAYMIFSRMEKWDLVSW 555
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDL-TPDIYTVGIILSACSSLATMERGKQVHAYAI 359
G+ N AM LF ++ +L PD YT I+SA + GK +H I
Sbjct: 556 NSMISGYFENEDGEKAMNLFVQLKALCFPKPDDYTYAGIISATGAFPCFSYGKPLHGQVI 615
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
+ G+ V +G+ LV MY K + A + I D + M+T Y+ G I
Sbjct: 616 KAGFVRSVFVGSTLVSMYFKNQETEAALRVFCSIPGKDAILWTEMITGYSKMADGMGAIR 675
Query: 420 HFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY---YDVKPSLKHYTCMVD 476
F + D LS C + ++ G E AY YDV+ S+ ++D
Sbjct: 676 CFSEMHHEVHEIDDYVLSGVLSVCAYLAILRQG-EIIHCYAYKLGYDVEMSVS--GSLID 732
Query: 477 LLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
+ ++ G L AY ++ PD W ++LGG HG
Sbjct: 733 MYAKNGNLEAAYLVFSQVS-HPDLKCWNSMLGGFSHHG 769
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 100/355 (28%), Positives = 170/355 (47%), Gaps = 21/355 (5%)
Query: 164 NTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGY--VDNSLYDEAFSMFRDL 221
N II Y G++ +A ++FD+M QR +S+N++++ Y V AF+++ +
Sbjct: 321 NNIISMYSRCGSLEDAHQVFDKMP----QRTHVSYNALLAAYSRVSEQHCVYAFNLYTQM 376
Query: 222 LMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQD 281
G+ P++ T S+L A + L G +HA ++ G +D V +L+ MY D
Sbjct: 377 -ENMGLRPSNMTITSLLQAASLHGDLLIGLLLHAKSLKFGFLNDICVQTSLLNMYSSCMD 435
Query: 282 LVAAQMAFDEIENIEN------LLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTV 335
L +A+ F ++ +N +LG +K D E VY LF EM+ + TP +YT
Sbjct: 436 LSSAESVFCDMNERDNVAWNSLILGYLKNDKIEKGVY------LFIEMMWVGFTPTVYTF 489
Query: 336 GIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST 395
+ILSACS L G+ +HA I D+H+ ALVDMY G + A + + R+
Sbjct: 490 CMILSACSRLKDYFSGRLIHARVIVGNVSPDLHLQNALVDMYCNAGDTQTAYMIFSRMEK 549
Query: 396 PDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGF-RPDHISFLSALSACVHAGSIKTGSE 454
DLVS N+M++ Y + G++ + F ++ A F +PD ++ +SA G
Sbjct: 550 WDLVSWNSMISGYFENEDGEKAMNLFVQLKALCFPKPDDYTYAGIISATGAFPCFSYGKP 609
Query: 455 FFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGG 509
+ S+ + +V + + E A IP D+++W ++ G
Sbjct: 610 LHGQVIKAGFVRSVFVGSTLVSMYFKNQETEAALRVFCSIP-GKDAILWTEMITG 663
>gi|147790932|emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
Length = 575
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 158/439 (35%), Positives = 247/439 (56%), Gaps = 37/439 (8%)
Query: 195 IISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIH 254
+ W ++I G+ L+++A + + +L + G+EP +FTF S+L C + GK +H
Sbjct: 40 VFFWTAIIHGHALRGLHEQALNFYAQMLTQ-GVEPNAFTFSSILKLCP----IEPGKALH 94
Query: 255 ALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFD---------------------EIE 293
+ A+ LG SD +V L+++Y R D+V+AQ FD E++
Sbjct: 95 SQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELD 154
Query: 294 NIENLLGKMKE----------DGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACS 343
L M+E DG+ N A+ LF ML P+ TV +LSAC
Sbjct: 155 AARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACG 214
Query: 344 SLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNA 403
L +E G+ VH+Y G +VH+GTALVDMY+KCGSL+ ARL + +I D+V+ N+
Sbjct: 215 QLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNS 274
Query: 404 MLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YY 462
M+ YAM G +E + F+ + G P +I+F+ LSAC H+G + G + F+ M Y
Sbjct: 275 MIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEY 334
Query: 463 DVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIA 522
++P ++HY CMV+LL RAG + +AYE +K + + PD V+WG LLG C HG + G+
Sbjct: 335 GIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKI 394
Query: 523 ADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHK 582
+ L++ N+G Y++L+N++A G W +AR R MKD + K PGCS IE +++H+
Sbjct: 395 VELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCSSIEVNNKVHE 454
Query: 583 FRASDRSHDRSEEIYTIID 601
F A +H + +EIY +++
Sbjct: 455 FLAGGLNHPKRKEIYMMLE 473
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 113/361 (31%), Positives = 183/361 (50%), Gaps = 11/361 (3%)
Query: 54 NETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLG 113
+ P++ W+A+I G G E+A+ +M +G+EPNA T SS+L C + G
Sbjct: 35 TQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTFSSILKLCP----IEPG 90
Query: 114 KEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCEN 173
K H + GF S+ +V GL+DVY R GD++SA ++F K+ VS ++ Y ++
Sbjct: 91 KALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKH 150
Query: 174 GNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFT 233
G + AR LFD ME +R + WN MI GY N + +EA +FR +L + +P T
Sbjct: 151 GELDAARVLFDGME----ERDGVCWNVMIDGYTQNGMPNEALVLFRRML-KAKAKPNEVT 205
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
SVL AC + +L G+ +H+ G+Q + VG ALV+MY + L A++ FD+I+
Sbjct: 206 VLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKID 265
Query: 294 NIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQ 353
+ + + G+ ++ A+QLF M + L P T ILSAC + G
Sbjct: 266 DKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWD 325
Query: 354 V-HAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST-PDLVSQNAMLTAYAMH 411
+ + G + + +V++ + G ++ A K ++ PD V +L A +H
Sbjct: 326 IFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLH 385
Query: 412 G 412
G
Sbjct: 386 G 386
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 142/298 (47%), Gaps = 9/298 (3%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y + G + A+++F MPE+ VS +++T A +G + A + M D V
Sbjct: 115 VYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDG-----V 169
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
W+ +I G+TQNG EA+ + RM +PN T+ SVL AC +L L G+ H YI
Sbjct: 170 CWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYI 229
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
NG N V LVD+Y +CG + A +F K K+ V+ N++IVGY G EA
Sbjct: 230 ENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEAL 289
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+LF M +G+ I++ ++S + E + +F + GIEP +G ++
Sbjct: 290 QLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNL 349
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
+ + E L + ++ D + G L+ CR +A E+ +NL
Sbjct: 350 LGRAGHVEQAYE---LVKNMNIEPDPVLWGTLLGA-CRLHGKIALGEKIVELLVDQNL 403
>gi|34365551|gb|AAQ65087.1| At4g14850 [Arabidopsis thaliana]
Length = 634
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 178/555 (32%), Positives = 299/555 (53%), Gaps = 51/555 (9%)
Query: 56 TP--NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLG 113
TP N+VSW+++I G QNG+ A+ F M+ EG+ PN T A A L+ G
Sbjct: 18 TPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTG 77
Query: 114 KEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCEN 173
K+ H + G ++DV+ C SA ++ K ++++
Sbjct: 78 KQIHALAVKCG---------RILDVFVGC----SAFDMYCKTRLRDD------------- 111
Query: 174 GNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFT 233
AR+LFD++ +R + +WN+ IS V + EA F + DG P S T
Sbjct: 112 -----ARKLFDEIP----ERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDG-HPNSIT 161
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
F + L AC+D L G ++H L + G +D V L++ Y + + + ++++ F E+
Sbjct: 162 FCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEM- 220
Query: 294 NIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDI-----YTVGIILSACSSLATM 348
+N + Y N + +L L DI + + +LSAC+ +A +
Sbjct: 221 GTKNAVSWCSLVA----AYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGL 276
Query: 349 ERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAY 408
E G+ +HA+A++ + + +G+ALVDMY KCG ++ + A+ + +LV++N+++ Y
Sbjct: 277 ELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGY 336
Query: 409 AMHGHGKEGIAHFRRILASGF--RPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVK 465
A G +A F + G P++++F+S LSAC AG+++ G + FD M + Y ++
Sbjct: 337 AHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIE 396
Query: 466 PSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADR 525
P +HY+C+VD+L RAG + AYEFIKK+P+ P +WGAL C HG + G +AA+
Sbjct: 397 PGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAEN 456
Query: 526 LIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRA 585
L +L+P ++GN+V+L+N FA AGRW++ R+++K + K G SWI ++++H F+A
Sbjct: 457 LFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQA 516
Query: 586 SDRSHDRSEEIYTII 600
DRSH ++EI T +
Sbjct: 517 KDRSHILNKEIQTTL 531
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 122/296 (41%), Gaps = 67/296 (22%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSW-----NSV------------------------VT 31
MY K DDA+K+F +PER+ +W NSV +T
Sbjct: 102 MYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSIT 161
Query: 32 ACA--------------------------------ANGLVLEALECLERMSS----LDNE 55
CA NGL+ +C + SS +
Sbjct: 162 FCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMG 221
Query: 56 TPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKE 115
T N VSW +++ + QN DE+A + R + + +E + +SSVL ACA + L LG+
Sbjct: 222 TKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRS 281
Query: 116 FHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGN 175
H + + FV + LVD+Y +CG + + + F + KN V+ N++I GY G
Sbjct: 282 IHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQ 341
Query: 176 VAEARELFDQM--EHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEP 229
V A LF++M G +++ S++S + +F + GIEP
Sbjct: 342 VDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEP 397
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 98/204 (48%), Gaps = 9/204 (4%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLD-NETPNL 59
MYGKCG ++D+++ F MPE++ V+ NS++ A G V AL E M+ TPN
Sbjct: 304 MYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNY 363
Query: 60 VSWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEFHG 118
+++ +++ ++ G E + + M++ G+EP A S ++ R + EF
Sbjct: 364 MTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEF-- 421
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGD-MLSALKIFSKFSIKNEVSCNTIIVG--YCENGN 175
I + V L + R G L L + F + + S N +++ + G
Sbjct: 422 -IKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGR 480
Query: 176 VAEARELFDQMEHLGVQRGI-ISW 198
AEA + ++++ +G+++G SW
Sbjct: 481 WAEANTVREELKGVGIKKGAGYSW 504
>gi|357127001|ref|XP_003565175.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Brachypodium distachyon]
Length = 849
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 166/538 (30%), Positives = 284/538 (52%), Gaps = 41/538 (7%)
Query: 58 NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAE--GLEPNARTLSSVLPACARLQKLSLGKE 115
N+VSW+ ++GG+ +NG A G+L MQ E G+ + T+ SVLP C+ L +L+ +E
Sbjct: 233 NVVSWNVMLGGYARNGEAGAAFGLLREMQMEERGVPADEITMLSVLPVCSGLPELAKLRE 292
Query: 116 FHGYITRNGF-MSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENG 174
H ++ R G ++ V N L+ Y RCG +L A ++F G C
Sbjct: 293 LHAFVVRRGLHLTGDMVPNALIAAYGRCGCLLHACRVFD---------------GIC--- 334
Query: 175 NVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTF 234
+ + SWN++I + N A +FR++ G +P F+
Sbjct: 335 -----------------SKMVSSWNALIGAHAQNGEASAAIELFREMTNACGQKPDWFSI 377
Query: 235 GSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIEN 294
GS+L+AC ++ L GK H + GL+ D+F+ +L+ +Y + A++ FD +E
Sbjct: 378 GSLLLACGNLKHLLHGKAAHGFILRNGLEKDSFIRVSLLSVYIQCGRESLARVLFDAVEE 437
Query: 295 IENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLD--LTPDIYTVGIILSACSSLATMERGK 352
+ + G+ N ++QLF EM S P + L ACS L + GK
Sbjct: 438 KDEVSWNTMIAGYSQNGLPGESLQLFREMQSKKGGHWPSLLAATSALVACSELPAVRLGK 497
Query: 353 QVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHG 412
++H +A++ D + ++++DMY+KCGS+ AR+ + R+ D VS M+T YA++G
Sbjct: 498 EMHCFALKADLCEDSFLSSSIIDMYSKCGSVDDARVFFDRLKAKDAVSWTVMITGYAVNG 557
Query: 413 HGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYY-DVKPSLKHY 471
GKE + + ++ G PD ++L L AC HAG ++ G FF M ++ L+HY
Sbjct: 558 RGKEAVGLYDKMGREGMEPDGFTYLGLLMACGHAGMLEDGLCFFQEMRNLPKIEAKLEHY 617
Query: 472 TCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEP 531
C++ +LSRAG +A ++ +P PD+ + ++L C HG +E G+ AD+L+ELEP
Sbjct: 618 ACVIGMLSRAGRFADAVALMEVMPEEPDAKILSSVLSACHMHGEVELGKKVADKLLELEP 677
Query: 532 NNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRS 589
+ +YV+ +N++A + +W ++ + R+ ++D + K PGCSWI+ +++ F A + S
Sbjct: 678 HKAEHYVLASNMYAGSRQWDEMRKVRKMLRDAGVAKEPGCSWIDIAGKVYSFVAGENS 735
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 144/531 (27%), Positives = 226/531 (42%), Gaps = 98/531 (18%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYG+CG +DDA+KVF+ M R NLV
Sbjct: 108 MYGRCGRVDDAEKVFEGMAGR------------------------------------NLV 131
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGL----EPNARTLSSVLPACARLQKLSLGKEF 116
SW+A++ E LFR E L P+ TL +VLP CA L G+
Sbjct: 132 SWNALMAAVADPRRGLE----LFRDCLEDLGGTAAPDEATLVTVLPMCAALAWPETGRAV 187
Query: 117 HGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIF---SKFSIKNEVSCNTIIVGYCEN 173
HG ++G+ + P V N LVD+Y +CG+M A F + +N VS N ++ GY N
Sbjct: 188 HGLAVKSGWDAAPRVSNVLVDMYAKCGEMADAECAFLEAPPGAGRNVVSWNVMLGGYARN 247
Query: 174 GNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRD-GIEPTSF 232
G AF + R++ M + G+
Sbjct: 248 GEAG-----------------------------------AAFGLLREMQMEERGVPADEI 272
Query: 233 TFGSVLIACADMNSLRKGKEIHALAIALGLQ-SDTFVGGALVEMYCRYQDLVAAQMAFDE 291
T SVL C+ + L K +E+HA + GL + V AL+ Y R L+ A FD
Sbjct: 273 TMLSVLPVCSGLPELAKLRELHAFVVRRGLHLTGDMVPNALIAAYGRCGCLLHACRVFDG 332
Query: 292 I-----ENIENLLGKMKEDGFEPNVYTWNAMQLFSEML-SLDLTPDIYTVGIILSACSSL 345
I + L+G ++G A++LF EM + PD +++G +L AC +L
Sbjct: 333 ICSKMVSSWNALIGAHAQNG-----EASAAIELFREMTNACGQKPDWFSIGSLLLACGNL 387
Query: 346 ATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAML 405
+ GK H + +R G + D I +L+ +Y +CG AR+ + + D VS N M+
Sbjct: 388 KHLLHGKAAHGFILRNGLEKDSFIRVSLLSVYIQCGRESLARVLFDAVEEKDEVSWNTMI 447
Query: 406 TAYAMHGHGKEGIAHFRRILAS--GFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYD 463
Y+ +G E + FR + + G P ++ SAL AC +++ G E D
Sbjct: 448 AGYSQNGLPGESLQLFREMQSKKGGHWPSLLAATSALVACSELPAVRLGKEMHCFALKAD 507
Query: 464 VKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHG 514
+ + ++D+ S+ G + +A F ++ A D+V W ++ G +G
Sbjct: 508 LCEDSFLSSSIIDMYSKCGSVDDARVFFDRLK-AKDAVSWTVMITGYAVNG 557
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 153/350 (43%), Gaps = 69/350 (19%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
YG+CG L A +VF + + SWN+++ A A NG A+E M++
Sbjct: 317 YGRCGCLLHACRVFDGICSKMVSSWNALIGAHAQNGEASAAIELFREMTN---------- 366
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
A G +P+ ++ S+L AC L+ L GK HG+I
Sbjct: 367 -------------------------ACGQKPDWFSIGSLLLACGNLKHLLHGKAAHGFIL 401
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
RNG + F+ L+ VY +CG A +F K+EVS NT+I GY +NG E+ +
Sbjct: 402 RNGLEKDSFIRVSLLSVYIQCGRESLARVLFDAVEEKDEVSWNTMIAGYSQNGLPGESLQ 461
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
LF +M+ + G P+ S L+AC
Sbjct: 462 LFREMQS----------------------------------KKGGHWPSLLAATSALVAC 487
Query: 242 ADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGK 301
+++ ++R GKE+H A+ L D+F+ ++++MY + + A++ FD ++ + +
Sbjct: 488 SELPAVRLGKEMHCFALKADLCEDSFLSSSIIDMYSKCGSVDDARVFFDRLKAKDAVSWT 547
Query: 302 MKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERG 351
+ G+ N A+ L+ +M + PD +T +L AC +E G
Sbjct: 548 VMITGYAVNGRGKEAVGLYDKMGREGMEPDGFTYLGLLMACGHAGMLEDG 597
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 127/273 (46%), Gaps = 45/273 (16%)
Query: 195 IISWNSMISGYVDNSLYDEAFSMFRDLLM-RDGIEPTSFTFGSVLIACADMNSLRKGKEI 253
+ WN +++ + +A ++ LL DG+ P FT L +C + G+++
Sbjct: 30 LPQWNGLLADLSRAGRHADALAILPRLLAASDGVAPDRFTLPPALKSCRGDD----GRQV 85
Query: 254 HALAIALGL-QSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVY 312
HA+A LGL D FVG +LV MY R + A+ F E + G+ N+
Sbjct: 86 HAVAAKLGLADGDPFVGNSLVSMYGRCGRVDDAEKVF------EGMAGR--------NLV 131
Query: 313 TWNAM-----------QLFSEMLSLDL----TPDIYTVGIILSACSSLATMERGKQVHAY 357
+WNA+ +LF + L DL PD T+ +L C++LA E G+ VH
Sbjct: 132 SWNALMAAVADPRRGLELFRDCLE-DLGGTAAPDEATLVTVLPMCAALAWPETGRAVHGL 190
Query: 358 AIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTP-----DLVSQNAMLTAYAMHG 412
A++ G+D+ + LVDMYAKCG + A A+ + P ++VS N ML YA +G
Sbjct: 191 AVKSGWDAAPRVSNVLVDMYAKCGEMADAECAF--LEAPPGAGRNVVSWNVMLGGYARNG 248
Query: 413 HGKEGIAHFR--RILASGFRPDHISFLSALSAC 443
R ++ G D I+ LS L C
Sbjct: 249 EAGAAFGLLREMQMEERGVPADEITMLSVLPVC 281
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 99/207 (47%), Gaps = 13/207 (6%)
Query: 315 NAMQLFSEMLSLD--LTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGY-DSDVHIGT 371
+A+ + +L+ + PD +T+ L +C + G+QVHA A + G D D +G
Sbjct: 48 DALAILPRLLAASDGVAPDRFTLPPALKSCRG----DDGRQVHAVAAKLGLADGDPFVGN 103
Query: 372 ALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRP 431
+LV MY +CG + A ++ ++ +LVS NA++ A A G E L P
Sbjct: 104 SLVSMYGRCGRVDDAEKVFEGMAGRNLVSWNALMAAVADPRRGLELFRDCLEDLGGTAAP 163
Query: 432 DHISFLSALSACVHAGSIKTGSEFFDLMAY--YDVKPSLKHYTCMVDLLSRAGELGEAY- 488
D + ++ L C +TG L +D P + + +VD+ ++ GE+ +A
Sbjct: 164 DEATLVTVLPMCAALAWPETGRAVHGLAVKSGWDAAPRVSNV--LVDMYAKCGEMADAEC 221
Query: 489 EFIKKIPMAPDSVM-WGALLGGCVSHG 514
F++ P A +V+ W +LGG +G
Sbjct: 222 AFLEAPPGAGRNVVSWNVMLGGYARNG 248
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 65/150 (43%), Gaps = 38/150 (25%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVT----------------------------- 31
MY KCGS+DDA+ F + +D VSW ++T
Sbjct: 521 MYSKCGSVDDARVFFDRLKAKDAVSWTVMITGYAVNGRGKEAVGLYDKMGREGMEPDGFT 580
Query: 32 ------ACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRM 85
AC G++ + L + M +L L ++ VIG ++ G +A+ ++ M
Sbjct: 581 YLGLLMACGHAGMLEDGLCFFQEMRNLPKIEAKLEHYACVIGMLSRAGRFADAVALMEVM 640
Query: 86 QAEGLEPNARTLSSVLPACARLQKLSLGKE 115
EP+A+ LSSVL AC ++ LGK+
Sbjct: 641 PE---EPDAKILSSVLSACHMHGEVELGKK 667
>gi|255565124|ref|XP_002523554.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223537116|gb|EEF38749.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 611
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 186/630 (29%), Positives = 301/630 (47%), Gaps = 109/630 (17%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY C L A+++F MP+ PN+
Sbjct: 39 MYADCDHLFSAQRLFDKMPQ------------------------------------PNVY 62
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+W+A+ G + ++G ++ + M+ + P+ VL AC +L G H +
Sbjct: 63 AWTAIFGFYLRHGMYDKCVQNYGFMKYSDVLPDNYVFPKVLRACTQLLWFEGGIWIHKDV 122
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
G SN V N L+D+Y +CG+ SA +F + ++ S N++I GY NG A
Sbjct: 123 IVCGCESNLQVCNSLIDMYVKCGNARSARLVFEEMEERDLFSWNSMISGYVSNGLADLAV 182
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSM----------------------- 217
EL + M G + +++WN+++ Y +DEA+ +
Sbjct: 183 ELLNCMRLDGFEPDVVTWNTLMDAYCQMGRFDEAWEVLKQIEQPNIISWTTLISSYSKIG 242
Query: 218 --------FRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTF-- 267
F+D+++R+ + P SVL++C + +LR GKEIH + + +
Sbjct: 243 EHDMSLRVFQDMIIREVVSPDLDCLCSVLVSCRHIGALRSGKEIHGYGTKMETNTVFYSS 302
Query: 268 VGGALVEMYC---RYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQL----- 319
G AL+ MY R QD + N+ L+ K ++ TWNAM L
Sbjct: 303 AGAALLTMYAKCGRIQDAI----------NVFELMDK-------SDIVTWNAMILGFVEL 345
Query: 320 ---------FSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR-CGYDSDVHI 369
F EM +D+ D T+ IL C ++ G +HAY + S V +
Sbjct: 346 DLGKQAIECFREMQRMDIKNDQTTISTILPVCD----LQYGNPIHAYVRKSITLSSVVTV 401
Query: 370 GTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGF 429
A++ MY KCG ++ A + + D+VS N M+ + MHGHG+ + + ++ SG
Sbjct: 402 WNAVIHMYCKCGCVRSAYTIFCSMPNKDVVSWNTMIGGFGMHGHGQAALKLLKEMILSGI 461
Query: 430 RPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAY 488
P+ +F S LSAC H+G + G F M Y + P ++HY+C+VD+L+RAG+ +A
Sbjct: 462 FPNSTTFTSVLSACSHSGLVDEGFRLFRSMTEDYSITPRMEHYSCIVDMLARAGQFADAV 521
Query: 489 EFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAG 548
FI K+P+ PD +WGALL C ++ NL+FG++AA++LI +EP G+YV L+N++A AG
Sbjct: 522 TFIHKMPLEPDKSIWGALLAACRAYQNLDFGRLAAEQLIRMEPKCAGHYVTLSNIYARAG 581
Query: 549 RWSDLARTRQKMKDRRMHKSPGCSWIEDRD 578
RW D R R++++ + + K G S IE RD
Sbjct: 582 RWDDAGRVRKEIEGKGLVKPSGQSLIETRD 611
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 118/516 (22%), Positives = 210/516 (40%), Gaps = 131/516 (25%)
Query: 100 VLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKN 159
+L C+ L+ L GK+ H IT +G+ +PF++ L+ +Y C + SA
Sbjct: 1 MLQLCSNLKSLHAGKQIHQQITVSGWGKDPFMLTKLIQMYADCDHLFSA----------- 49
Query: 160 EVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFR 219
+ LFD+M Q + +W ++ Y+ + +YD+ +
Sbjct: 50 --------------------QRLFDKMP----QPNVYAWTAIFGFYLRHGMYDKCVQNYG 85
Query: 220 DLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRY 279
+ D + P ++ F VL AC + G IH I G +S+ V +L++MY +
Sbjct: 86 FMKYSD-VLPDNYVFPKVLRACTQLLWFEGGIWIHKDVIVCGCESNLQVCNSLIDMYVKC 144
Query: 280 QDLVAAQMAFDEIENIE---------------------NLLGKMKEDGFEPNVYTWN--- 315
+ +A++ F+E+E + LL M+ DGFEP+V TWN
Sbjct: 145 GNARSARLVFEEMEERDLFSWNSMISGYVSNGLADLAVELLNCMRLDGFEPDVVTWNTLM 204
Query: 316 ------------------------------------------AMQLFSEMLSLD-LTPDI 332
++++F +M+ + ++PD+
Sbjct: 205 DAYCQMGRFDEAWEVLKQIEQPNIISWTTLISSYSKIGEHDMSLRVFQDMIIREVVSPDL 264
Query: 333 YTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVH--IGTALVDMYAKCGSLKHARLAY 390
+ +L +C + + GK++H Y + ++ + G AL+ MYAKCG ++ A +
Sbjct: 265 DCLCSVLVSCRHIGALRSGKEIHGYGTKMETNTVFYSSAGAALLTMYAKCGRIQDAINVF 324
Query: 391 KRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSAC------- 443
+ + D+V+ NAM+ + GK+ I FR + + D + + L C
Sbjct: 325 ELMDKSDIVTWNAMILGFVELDLGKQAIECFREMQRMDIKNDQTTISTILPVCDLQYGNP 384
Query: 444 VHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMW 503
+HA K+ L + V ++ H C + G + AY +P D V W
Sbjct: 385 IHAYVRKS----ITLSSVVTVWNAVIHMYC------KCGCVRSAYTIFCSMP-NKDVVSW 433
Query: 504 GALLGGCVSHGNLEFGQIAADRLIELE-----PNNT 534
++GG HG+ GQ A L E+ PN+T
Sbjct: 434 NTMIGGFGMHGH---GQAALKLLKEMILSGIFPNST 466
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 147/337 (43%), Gaps = 39/337 (11%)
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
+L C+++ SL GK+IH G D F+ L++MY L +AQ FD++
Sbjct: 1 MLQLCSNLKSLHAGKQIHQQITVSGWGKDPFMLTKLIQMYADCDHLFSAQRLFDKMP--- 57
Query: 297 NLLGKMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPDIYTVGIILSAC 342
+PNVY W A+ Q + M D+ PD Y +L AC
Sbjct: 58 -----------QPNVYAWTAIFGFYLRHGMYDKCVQNYGFMKYSDVLPDNYVFPKVLRAC 106
Query: 343 SSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQN 402
+ L E G +H I CG +S++ + +L+DMY KCG+ + ARL ++ + DL S N
Sbjct: 107 TQLLWFEGGIWIHKDVIVCGCESNLQVCNSLIDMYVKCGNARSARLVFEEMEERDLFSWN 166
Query: 403 AMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYY 462
+M++ Y +G + + GF PD +++ + + A G E +
Sbjct: 167 SMISGYVSNGLADLAVELLNCMRLDGFEPDVVTWNTLMDAYCQMGRFDEAWEVLKQIE-- 224
Query: 463 DVKPSLKHYTCMVDLLSRAGE----LGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEF 518
+P++ +T ++ S+ GE L + I + ++PD ++L C G L
Sbjct: 225 --QPNIISWTTLISSYSKIGEHDMSLRVFQDMIIREVVSPDLDCLCSVLVSCRHIGALRS 282
Query: 519 GQIAADRLIELEPNN---TGNYVMLANLFAYAGRWSD 552
G+ ++E N + L ++A GR D
Sbjct: 283 GKEIHGYGTKMETNTVFYSSAGAALLTMYAKCGRIQD 319
>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like, partial [Brachypodium distachyon]
Length = 745
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 170/540 (31%), Positives = 286/540 (52%), Gaps = 40/540 (7%)
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAE-GLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
S++ +I F + G+ E+A+ + M + + P+ T+++ + +C+R+ LS+G+ Y
Sbjct: 137 SYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVKSCSRMCDLSVGRGVQAY 196
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ GFM + FV+N L+ +Y CGD+++A +F +
Sbjct: 197 AFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQV---------------------- 234
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLL-MRDGIEPTSFTFGSVL 238
+G+I+WN+MI+GYV N + E MF+ +L +R + T SV
Sbjct: 235 -------------KGVIAWNAMIAGYVKNGDWKEVVEMFKGMLEVRAPFD--EVTLLSVA 279
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
AC + G+ I A G+ + ALV+MY + +L A+ FD + + + +
Sbjct: 280 TACGRLGDANLGQWIAEYAEEKGMLRSRNLATALVDMYAKCGELDKARRLFDRMHSRDVV 339
Query: 299 LGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYA 358
G+ + A+ +F+EM ++ P+ T+ +LSAC+ L +E GK VH+Y
Sbjct: 340 AWSAMISGYTQSDRCREALAIFNEMQGTEVNPNDVTMVSVLSACAVLGALETGKWVHSYI 399
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGI 418
R V +GTALVD YAKCG +K A A++ + + + A++ A +G +E +
Sbjct: 400 RRKDLPLTVILGTALVDFYAKCGCIKDAVKAFESMPVRNTWTWTALIKGMASNGRSREAL 459
Query: 419 AHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDL 477
F +L + P ++F+ L AC H ++ G F M Y + P ++HY CMVDL
Sbjct: 460 ELFSSMLEANIEPTDVTFIGVLLACSHGCLVEEGRRHFTSMTQDYGICPRIEHYGCMVDL 519
Query: 478 LSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNY 537
L RAG + EAY+FI+ +P+ P++V+W ALL C H N+E G+ A +++ L+P ++GNY
Sbjct: 520 LGRAGLIDEAYQFIRNMPIEPNAVVWRALLSACTVHKNVEIGEEALKQIVPLDPCHSGNY 579
Query: 538 VMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
++L+N +A G+W + A R++MK++ + K PGCS IE I +F A D H + EIY
Sbjct: 580 ILLSNTYASVGQWKNAAMVRKEMKEKGVEKIPGCSLIELEGTIFEFFAEDSEHPQLTEIY 639
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 157/322 (48%), Gaps = 1/322 (0%)
Query: 193 RGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKE 252
R S+N +I ++ ++A +F ++L + P T + + +C+ M L G+
Sbjct: 133 RSARSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVKSCSRMCDLSVGRG 192
Query: 253 IHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVY 312
+ A A G D FV +L+ MY D+VAA + F ++ + G+ N
Sbjct: 193 VQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKNGD 252
Query: 313 TWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTA 372
+++F ML + D T+ + +AC L G+ + YA G ++ TA
Sbjct: 253 WKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRNLATA 312
Query: 373 LVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPD 432
LVDMYAKCG L AR + R+ + D+V+ +AM++ Y +E +A F + + P+
Sbjct: 313 LVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTEVNPN 372
Query: 433 HISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIK 492
++ +S LSAC G+++TG + D+ ++ T +VD ++ G + +A + +
Sbjct: 373 DVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAVKAFE 432
Query: 493 KIPMAPDSVMWGALLGGCVSHG 514
+P+ ++ W AL+ G S+G
Sbjct: 433 SMPVR-NTWTWTALIKGMASNG 453
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 170/377 (45%), Gaps = 46/377 (12%)
Query: 55 ETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEP-NARTLSSVLPACARLQKLSLG 113
+ +++W+A+I G+ +NG +E + M F+ E P + TL SV AC RL +LG
Sbjct: 233 QVKGVIAWNAMIAGYVKNGDWKEVVEM-FKGMLEVRAPFDEVTLLSVATACGRLGDANLG 291
Query: 114 KEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCEN 173
+ Y G + + + LVD+Y +CG++ A ++F + ++ V+ + +I GY ++
Sbjct: 292 QWIAEYAEEKGMLRSRNLATALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQS 351
Query: 174 GNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFT 233
EA +F++M+ G + + P T
Sbjct: 352 DRCREALAIFNEMQ--GTE----------------------------------VNPNDVT 375
Query: 234 FGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIE 293
SVL ACA + +L GK +H+ L +G ALV+ Y + + A AF+ +
Sbjct: 376 MVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAVKAFESMP 435
Query: 294 NIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTP-DIYTVGIILSACSSLATMERGK 352
G N + A++LFS ML ++ P D+ +G++L ACS +E G+
Sbjct: 436 VRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIGVLL-ACSHGCLVEEGR 494
Query: 353 QVHAYAIRCGY---DSDVHIGTALVDMYAKCGSLKHARLAYKRIST-PDLVSQNAMLTAY 408
+ H ++ Y H G +VD+ + G + A + + P+ V A+L+A
Sbjct: 495 R-HFTSMTQDYGICPRIEHYG-CMVDLLGRAGLIDEAYQFIRNMPIEPNAVVWRALLSAC 552
Query: 409 AMHGHGKEGIAHFRRIL 425
+H + + G ++I+
Sbjct: 553 TVHKNVEIGEEALKQIV 569
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 100/238 (42%), Gaps = 36/238 (15%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG LD A+++F M RD +V
Sbjct: 316 MYAKCGELDKARRLFDRMHSRD------------------------------------VV 339
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+WSA+I G+TQ+ EA+ + MQ + PN T+ SVL ACA L L GK H YI
Sbjct: 340 AWSAMISGYTQSDRCREALAIFNEMQGTEVNPNDVTMVSVLSACAVLGALETGKWVHSYI 399
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R + LVD Y +CG + A+K F ++N + +I G NG EA
Sbjct: 400 RRKDLPLTVILGTALVDFYAKCGCIKDAVKAFESMPVRNTWTWTALIKGMASNGRSREAL 459
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
ELF M ++ +++ ++ L +E F + GI P +G ++
Sbjct: 460 ELFSSMLEANIEPTDVTFIGVLLACSHGCLVEEGRRHFTSMTQDYGICPRIEHYGCMV 517
>gi|296085749|emb|CBI29560.3| unnamed protein product [Vitis vinifera]
Length = 640
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 184/604 (30%), Positives = 310/604 (51%), Gaps = 72/604 (11%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
+Y KCG L A+K F+ + + + S+N+++ A A L A + +++ P+LV
Sbjct: 52 LYSKCGRLAWARKAFQDISDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPE-----PDLV 106
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
S++ +I + G A+G+ M+ GL+ + TLS+V+ AC + L + H
Sbjct: 107 SYNTLISAYADCGETAPALGLFSGMREMGLDMDGFTLSAVITACC--DDVGLIGQLHSVA 164
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+GF S V N L+ Y + NG++ +A+
Sbjct: 165 VSSGFDSYVSVNNALLTYYGK-------------------------------NGDLDDAK 193
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+F M G R +SWNSMI Y + +A +F++++ R G+ FT SVL A
Sbjct: 194 RVFYGM---GGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMV-RRGLNVDMFTLASVLTA 249
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQD-LVAAQMAFDEIENIENLL 299
+ L G + H I G ++ VG L+++Y + + + F+EI + +L
Sbjct: 250 FTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVL 309
Query: 300 GKMKEDGFEPNV-YTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYA 358
G+ N + +A++ F +M + P+ + ++SACS+L++ +GKQ+H+ A
Sbjct: 310 WNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLA 369
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGI 418
++ +D R++ + VS N+M+ YA HG E +
Sbjct: 370 LKRLFD---------------------------RMAEHNTVSLNSMIAGYAQHGIEMESL 402
Query: 419 AHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDL 477
F+ +L P I+F+S LSAC H G ++ G +F++M ++++P +HY+CM+DL
Sbjct: 403 HLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDL 462
Query: 478 LSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNY 537
L RAG+L EA I ++P P S+ W +LLG C +HGN+E AA+++++LEP+N Y
Sbjct: 463 LGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAPY 522
Query: 538 VMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
V+L+N++A AGRW ++A R+ M+DR + K PGCSWIE + IH F A D SH +EIY
Sbjct: 523 VVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMIKEIY 582
Query: 598 TIID 601
++
Sbjct: 583 EFLE 586
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 57/122 (46%), Gaps = 4/122 (3%)
Query: 338 ILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPD 397
+L C + + GK +H+ I+ + + +Y+KCG L AR A++ IS P+
Sbjct: 14 LLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPN 73
Query: 398 LVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFD 457
+ S NA++ AYA + IAH ++ PD +S+ + +SA G F
Sbjct: 74 VFSFNAIIAAYA--KESRPLIAH--QLFDQIPEPDLVSYNTLISAYADCGETAPALGLFS 129
Query: 458 LM 459
M
Sbjct: 130 GM 131
>gi|224107543|ref|XP_002314516.1| predicted protein [Populus trichocarpa]
gi|222863556|gb|EEF00687.1| predicted protein [Populus trichocarpa]
Length = 632
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 179/561 (31%), Positives = 294/561 (52%), Gaps = 69/561 (12%)
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W+++I GF +N EA G ++M G+ + TL+++ C + L+ GK HG
Sbjct: 96 WNSLINGFVKNRAYNEAFGWFYQMCCRGVLLDDYTLATMSKVCHEIGDLNAGKLIHGKSL 155
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARE 181
+ GF+ + V N L+ +Y +CG LK+F + +N S N I+ GY ++G+ +E
Sbjct: 156 KTGFVLDVIVANSLMSMYSKCGGFGECLKLFDEMPERNVGSWNVILSGYADSGDRNFDKE 215
Query: 182 LFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIAC 241
+SG+V + + +G++P +FT S+L C
Sbjct: 216 --------------------VSGFVKD-------------MQIEGLKPDAFTVSSLLTLC 242
Query: 242 -ADMNSLRKGKEIHA----LAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
M G+E+H + +A+G ++ +G L++MY R + + FD +E
Sbjct: 243 NGHMGKRDHGRELHGFIVRIELAVGSGTEVHLGCCLIDMYSRSNRVDVGRRVFDRMEC-- 300
Query: 297 NLLGKMKEDGFEPNVYTWNAM--------------QLFSEMLSLD-LTPDIYTVGIILSA 341
NVY W AM LF EM D + P+ ++ +L A
Sbjct: 301 ------------RNVYAWTAMINGHVQNGALEEGLVLFHEMQVRDGVEPNKVSLVSVLPA 348
Query: 342 CSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIS-TPDLVS 400
CS++A + KQ+H YAIR +++DV + AL+DMY+KCGSL HA+ ++ S D +S
Sbjct: 349 CSAVAGLTGVKQIHGYAIRKQFNNDVSLCNALIDMYSKCGSLDHAKQVFEFGSFRRDPIS 408
Query: 401 QNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFF-DLM 459
++M++ Y +HG G+E + + ++L G +PD I+ + LSAC AG + G + +
Sbjct: 409 WSSMISGYGLHGKGEEAVFVYNKMLQLGNKPDMITIVGVLSACSRAGLVDEGLCIYKSAI 468
Query: 460 AYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFG 519
Y +KP+++ C+VD+L R+G+LG+A ++IK +PM P +WGA++ + HGN E
Sbjct: 469 NKYRIKPTVEICACVVDMLGRSGQLGQALDYIKTMPMEPSPSVWGAVVSASIIHGNSEMQ 528
Query: 520 QIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDE 579
+A L++LEP N NYV L+NL A + RW ++ R MKDR + K+PGCSWI +
Sbjct: 529 DLAYRFLVQLEPENPSNYVSLSNLHASSRRWDVVSEVRTMMKDRCLTKTPGCSWISINNT 588
Query: 580 IHKFRASDRSHDRSEEIYTII 600
H F A+D+ H S+ IY ++
Sbjct: 589 THFFYAADKLHPCSKSIYELL 609
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/445 (22%), Positives = 181/445 (40%), Gaps = 73/445 (16%)
Query: 108 QKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTII 167
+ L L ++ H I GF NPF+ L+ SA IF
Sbjct: 41 KSLKLTQQCHARILSLGFTQNPFLATKLI----------SAYAIF--------------- 75
Query: 168 VGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGI 227
G A +R +FD + + + WNS+I+G+V N Y+EAF F + R G+
Sbjct: 76 ------GVPALSRLVFDSLHF----KSVYLWNSLINGFVKNRAYNEAFGWFYQMCCR-GV 124
Query: 228 EPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQM 287
+T ++ C ++ L GK IH ++ G D V +L+ MY +
Sbjct: 125 LLDDYTLATMSKVCHEIGDLNAGKLIHGKSLKTGFVLDVIVANSLMSMYSKCGGFGECLK 184
Query: 288 AFDEIENIENLLGKMKEDGFEPNVYTWNAM-----------------QLFSEMLSLDLTP 330
FDE+ E NV +WN + +M L P
Sbjct: 185 LFDEMP--------------ERNVGSWNVILSGYADSGDRNFDKEVSGFVKDMQIEGLKP 230
Query: 331 DIYTVGIILSACSS-LATMERGKQVHAYAIR----CGYDSDVHIGTALVDMYAKCGSLKH 385
D +TV +L+ C+ + + G+++H + +R G ++VH+G L+DMY++ +
Sbjct: 231 DAFTVSSLLTLCNGHMGKRDHGRELHGFIVRIELAVGSGTEVHLGCCLIDMYSRSNRVDV 290
Query: 386 ARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRI-LASGFRPDHISFLSALSACV 444
R + R+ ++ + AM+ + +G +EG+ F + + G P+ +S +S L AC
Sbjct: 291 GRRVFDRMECRNVYAWTAMINGHVQNGALEEGLVLFHEMQVRDGVEPNKVSLVSVLPACS 350
Query: 445 HAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWG 504
+ + + ++D+ S+ G L A + + D + W
Sbjct: 351 AVAGLTGVKQIHGYAIRKQFNNDVSLCNALIDMYSKCGSLDHAKQVFEFGSFRRDPISWS 410
Query: 505 ALLGGCVSHGNLEFGQIAADRLIEL 529
+++ G HG E +++++L
Sbjct: 411 SMISGYGLHGKGEEAVFVYNKMLQL 435
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 117/464 (25%), Positives = 195/464 (42%), Gaps = 95/464 (20%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG + K+F MPER+ SWN +++ A +G
Sbjct: 172 MYSKCGGFGECLKLFDEMPERNVGSWNVILSGYADSG----------------------- 208
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPAC-ARLQKLSLGKEFHGY 119
+D+E G + MQ EGL+P+A T+SS+L C + K G+E HG+
Sbjct: 209 ----------DRNFDKEVSGFVKDMQIEGLKPDAFTVSSLLTLCNGHMGKRDHGRELHGF 258
Query: 120 ITR----NGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGN 175
I R G + + L+D+Y R + ++F + +N + +I G+ +NG
Sbjct: 259 IVRIELAVGSGTEVHLGCCLIDMYSRSNRVDVGRRVFDRMECRNVYAWTAMINGHVQNGA 318
Query: 176 VAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFG 235
+ E LF +M+ +RDG+EP +
Sbjct: 319 LEEGLVLFHEMQ-----------------------------------VRDGVEPNKVSLV 343
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
SVL AC+ + L K+IH AI +D + AL++MY + L A+ F+
Sbjct: 344 SVLPACSAVAGLTGVKQIHGYAIRKQFNNDVSLCNALIDMYSKCGSLDHAKQVFE----- 398
Query: 296 ENLLGKMKED---------GFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLA 346
G + D G+ + A+ ++++ML L PD+ T+ +LSACS
Sbjct: 399 ---FGSFRRDPISWSSMISGYGLHGKGEEAVFVYNKMLQLGNKPDMITIVGVLSACSRAG 455
Query: 347 TMERGKQVHAYAI-RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST-PDLVSQNAM 404
++ G ++ AI + V I +VDM + G L A K + P A+
Sbjct: 456 LVDEGLCIYKSAINKYRIKPTVEICACVVDMLGRSGQLGQALDYIKTMPMEPSPSVWGAV 515
Query: 405 LTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGS 448
++A +HG+ + +R ++ P++ S +LS +HA S
Sbjct: 516 VSASIIHGNSEMQDLAYRFLVQ--LEPENPSNYVSLSN-LHASS 556
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 130/314 (41%), Gaps = 12/314 (3%)
Query: 246 SLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKED 305
SL+ ++ HA ++LG + F+ L+ Y + +++ FD + L +
Sbjct: 42 SLKLTQQCHARILSLGFTQNPFLATKLISAYAIFGVPALSRLVFDSLHFKSVYLWNSLIN 101
Query: 306 GFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDS 365
GF N A F +M + D YT+ + C + + GK +H +++ G+
Sbjct: 102 GFVKNRAYNEAFGWFYQMCCRGVLLDDYTLATMSKVCHEIGDLNAGKLIHGKSLKTGFVL 161
Query: 366 DVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHG---HGKEGIAHFR 422
DV + +L+ MY+KCG + + ++ S N +L+ YA G KE +
Sbjct: 162 DVIVANSLMSMYSKCGGFGECLKLFDEMPERNVGSWNVILSGYADSGDRNFDKEVSGFVK 221
Query: 423 RILASGFRPDHISFLSALSACV-HAGSIKTGSEFFDLMAYYDVK----PSLKHYTCMVDL 477
+ G +PD + S L+ C H G G E + ++ + C++D+
Sbjct: 222 DMQIEGLKPDAFTVSSLLTLCNGHMGKRDHGRELHGFIVRIELAVGSGTEVHLGCCLIDM 281
Query: 478 LSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLI---ELEPNNT 534
SR+ + ++ + W A++ G V +G LE G + + +EPN
Sbjct: 282 YSRSNRVDVGRRVFDRME-CRNVYAWTAMINGHVQNGALEEGLVLFHEMQVRDGVEPNKV 340
Query: 535 GNYVMLANLFAYAG 548
+L A AG
Sbjct: 341 SLVSVLPACSAVAG 354
>gi|224058449|ref|XP_002299515.1| predicted protein [Populus trichocarpa]
gi|222846773|gb|EEE84320.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 176/574 (30%), Positives = 297/574 (51%), Gaps = 49/574 (8%)
Query: 27 NSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQ 86
N+V++ A G ++A++ + ++ P++VSW+ IG + EA+ + +
Sbjct: 13 NAVMSMYARCGREVDAIKVFDEIAE-----PDVVSWTERIGTASDG---HEAVELFRIVL 64
Query: 87 AEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDML 146
+ GL+ N TL +VL ++ L+ GK+ + G+ V N LV +Y +CG +
Sbjct: 65 SLGLDVNEYTLINVLSMIGGVKFLNAGKQIQALCHKTGYFQVVSVSNALVSMYGKCGQIC 124
Query: 147 SALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYV 206
A ++F I++ V SWNS+IS
Sbjct: 125 DACRVFYNMIIRDSV-----------------------------------SWNSLISACS 149
Query: 207 DNSLYDEAFSMFRDLLMRD-GIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSD 265
+N ++A +F MR+ ++PT T S+L A ++ N+ ++ +IH+L + G D
Sbjct: 150 ENGFVNQALEVFYQ--MRELSLQPTIHTLASILEAVSNSNNTKQVIQIHSLVVKCGFMFD 207
Query: 266 TFVGGALVEMYCRYQDLVAAQMAFDEIENIENL-LGKMKEDGFEPNVYTWNAMQLFSEML 324
+ L+ Y R + ++ F EI+ + + L M YT +A+ L+ +
Sbjct: 208 VSMISCLITAYGRCNSMDESKRVFAEIDKVNLVHLNTMITTFVRAGYYT-DALALYQTIW 266
Query: 325 SLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLK 384
SL D T IIL ACS++ M+ G+ VH+ ++ G+D D + ++++D+Y KCGS+
Sbjct: 267 SLHRKVDSRTFSIILKACSAITDMQLGRAVHSLVLKTGFDQDSFVESSVIDIYCKCGSIG 326
Query: 385 HARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACV 444
A A++ S L + NAM+ YA HG +E F ++ G PD I++L LS+C
Sbjct: 327 QAEKAFRSSSMNSLAAWNAMMMGYAHHGCYQEVFDLFNKMSQFGIEPDEITYLGVLSSCC 386
Query: 445 HAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMW 503
H G +K + D M + + P L+HY CM+DLL R G L +A + I +P+ PD +W
Sbjct: 387 HGGLVKEARHYLDSMFELHGIIPHLEHYACMIDLLGRVGLLEDAKKTIDHMPIQPDVHIW 446
Query: 504 GALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDR 563
LL C HG++E G++AA +L+E+ P N Y++L+NL+A G W+ + R R++MK++
Sbjct: 447 QILLSACNIHGHVELGRVAARKLLEIHPENESAYILLSNLYASVGMWNAVGRLRKEMKEK 506
Query: 564 RMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
+ K PG SWI+ + H F +D SH +S+EIY
Sbjct: 507 NLRKEPGSSWIQVGRKSHTFFVNDTSHPQSKEIY 540
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 102/441 (23%), Positives = 180/441 (40%), Gaps = 102/441 (23%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGKCG + DA +VF M RD VSWNS+++AC+ NG V +ALE
Sbjct: 116 MYGKCGQICDACRVFYNMIIRDSVSWNSLISACSENGFVNQALE---------------- 159
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
+ ++M+ L+P TL+S+L A + + H +
Sbjct: 160 --------------------VFYQMRELSLQPTIHTLASILEAVSNSNNTKQVIQIHSLV 199
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ GFM + +++ L+ Y RC M + ++F++ N V NT+I + G +A
Sbjct: 200 VKCGFMFDVSMISCLITAYGRCNSMDESKRVFAEIDKVNLVHLNTMITTFVRAGYYTDAL 259
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+LY +S+ R + R TF +L A
Sbjct: 260 ----------------------------ALYQTIWSLHRKVDSR--------TFSIILKA 283
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C+ + ++ G+ +H+L + G D+FV +++++YC+ + A+ AF
Sbjct: 284 CSAITDMQLGRAVHSLVLKTGFDQDSFVESSVIDIYCKCGSIGQAEKAF----------- 332
Query: 301 KMKEDGFEPNVYTWNAM--------------QLFSEMLSLDLTPD-IYTVGIILSACSSL 345
++ WNAM LF++M + PD I +G++ S C
Sbjct: 333 ---RSSSMNSLAAWNAMMMGYAHHGCYQEVFDLFNKMSQFGIEPDEITYLGVLSSCCHGG 389
Query: 346 ATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST-PDLVSQNAM 404
E + + G + ++D+ + G L+ A+ + PD+ +
Sbjct: 390 LVKEARHYLDSMFELHGIIPHLEHYACMIDLLGRVGLLEDAKKTIDHMPIQPDVHIWQIL 449
Query: 405 LTAYAMHGHGKEGIAHFRRIL 425
L+A +HGH + G R++L
Sbjct: 450 LSACNIHGHVELGRVAARKLL 470
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 120/302 (39%), Gaps = 59/302 (19%)
Query: 264 SDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWN-------- 315
S A++ MY R V A FDEI EP+V +W
Sbjct: 7 SSMHFSNAVMSMYARCGREVDAIKVFDEIA--------------EPDVVSWTERIGTASD 52
Query: 316 ---AMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTA 372
A++LF +LSL L + YT+ +LS + + GKQ+ A + GY V + A
Sbjct: 53 GHEAVELFRIVLSLGLDVNEYTLINVLSMIGGVKFLNAGKQIQALCHKTGYFQVVSVSNA 112
Query: 373 LVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPD 432
LV MY KCG + A + + D VS N++++A + +G + + F ++ +P
Sbjct: 113 LVSMYGKCGQICDACRVFYNMIIRDSVSWNSLISACSENGFVNQALEVFYQMRELSLQPT 172
Query: 433 HISFLSALSACVHAGSIKTGSEFFDLMA----YYDV------------------------ 464
+ S L A ++ + K + L+ +DV
Sbjct: 173 IHTLASILEAVSNSNNTKQVIQIHSLVVKCGFMFDVSMISCLITAYGRCNSMDESKRVFA 232
Query: 465 ---KPSLKHYTCMVDLLSRAGELGEA---YEFIKKIPMAPDSVMWGALLGGCVSHGNLEF 518
K +L H M+ RAG +A Y+ I + DS + +L C + +++
Sbjct: 233 EIDKVNLVHLNTMITTFVRAGYYTDALALYQTIWSLHRKVDSRTFSIILKACSAITDMQL 292
Query: 519 GQ 520
G+
Sbjct: 293 GR 294
>gi|147856457|emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]
Length = 761
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 182/611 (29%), Positives = 314/611 (51%), Gaps = 80/611 (13%)
Query: 56 TPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKE 115
PN+ +++++ ++ + + M MQ G+ P+A ++ + + G
Sbjct: 62 NPNVFVFTSMLRFYSHLQDHAKVVLMFEHMQGCGVRPDAFVYPILIKSAG-----NGGIG 116
Query: 116 FHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSK--------------------- 154
FH ++ + G S+ FV N ++D+Y R G + A K+F +
Sbjct: 117 FHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKW 176
Query: 155 ---------FSI---KNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMI 202
F + +N ++ ++ GY + ++ AR FD M +R ++SWN+M+
Sbjct: 177 ESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMP----ERSVVSWNAML 232
Query: 203 SGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGL 262
SGY N L +E +F D ++ GIEP T+ +V+ AC+ + +
Sbjct: 233 SGYAQNGLAEEVLRLF-DEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKQI 291
Query: 263 QSDTFVGGALVEMYCRYQDLVAAQMAFDEI----------------ENIENLLGKMKEDG 306
Q + FV AL++MY + + AA+ FDE+ + NL +
Sbjct: 292 QLNCFVRTALLDMYAKCGSIGAARRIFDELGAYRNSVTWNAMISAYTRVGNLDSARELFN 351
Query: 307 FEP--NVYTWNAM--------------QLFSEMLSLD-LTPDIYTVGIILSACSSLATME 349
P NV TWN+M +LF EM++ LTPD T+ ++SAC L +E
Sbjct: 352 TMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALE 411
Query: 350 RGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYA 409
G V + + A++ MY++CGS++ A+ ++ ++T D+VS N +++ +A
Sbjct: 412 LGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFA 471
Query: 410 MHGHGKEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLK 469
HGHG E I + G PD ++F+ L+AC HAG ++ G + F+ + P++
Sbjct: 472 AHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIK----DPAID 527
Query: 470 HYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIEL 529
HY CMVDLL R GEL +A ++++PM P + ++G+LL H +E G++AA++L EL
Sbjct: 528 HYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQVELGELAANKLFEL 587
Query: 530 EPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRS 589
EP+N+GN+++L+N++A AGRW D+ R R+ MK + K+ G SW+E ++HKF +DRS
Sbjct: 588 EPDNSGNFILLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSWVEYGGKLHKFIVADRS 647
Query: 590 HDRSEEIYTII 600
H+RS++IY ++
Sbjct: 648 HERSDDIYQLL 658
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 114/412 (27%), Positives = 197/412 (47%), Gaps = 15/412 (3%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y K S A+ +F +MPER+ ++W ++VT A ++ LE R E ++VS
Sbjct: 173 YWKWESEGQAQWLFDVMPERNVITWTAMVTGYAK----VKDLEAARRYFDCMPER-SVVS 227
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W+A++ G+ QNG EE + + M G+EP+ T +V+ AC+ L +
Sbjct: 228 WNAMLSGYAQNGLAEEVLRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLH 287
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKF-SIKNEVSCNTIIVGYCENGNVAEAR 180
+ N FV L+D+Y +CG + +A +IF + + +N V+ N +I Y GN+ AR
Sbjct: 288 QKQIQLNCFVRTALLDMYAKCGSIGAARRIFDELGAYRNSVTWNAMISAYTRVGNLDSAR 347
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
ELF+ M R +++WNSMI+GY N A +F++++ + P T SV+ A
Sbjct: 348 ELFNTMP----GRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISA 403
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
C + +L G + ++ A++ MY R + A+ F E+ + +
Sbjct: 404 CGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSY 463
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
GF + + A+ L S M + PD T +L+ACS +E G++V +I+
Sbjct: 464 NTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFE-SIK 522
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRIST-PDLVSQNAMLTAYAMH 411
D + +VD+ + G L+ A+ +R+ P ++L A +H
Sbjct: 523 ---DPAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLLNASRIH 571
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 119/255 (46%), Gaps = 43/255 (16%)
Query: 1 MYGKCGSLDDAKKVF-KMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNL 59
MY KCGS+ A+++F ++ R+ V+WN++++A G + A E M N+
Sbjct: 304 MYAKCGSIGAARRIFDELGAYRNSVTWNAMISAYTRVGNLDSARELFNTMPG-----RNV 358
Query: 60 VSWSAVIGGFTQNGYDEEAIGMLFRM-QAEGLEPNARTLSSVLPACARLQKLSLGKEFHG 118
V+W+++I G+ QNG AI + M A+ L P+ T+ SV+ AC L L LG
Sbjct: 359 VTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVR 418
Query: 119 YITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAE 178
++T N + N ++ +Y RCG M A ++F + + ++ VS NT+I G+ +G+ E
Sbjct: 419 FLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVE 478
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
A L M+ GIEP TF VL
Sbjct: 479 AINLMSTMK------------------------------------EGGIEPDRVTFIGVL 502
Query: 239 IACADMNSLRKGKEI 253
AC+ L +G+++
Sbjct: 503 TACSHAGLLEEGRKV 517
>gi|224099379|ref|XP_002311462.1| predicted protein [Populus trichocarpa]
gi|222851282|gb|EEE88829.1| predicted protein [Populus trichocarpa]
Length = 538
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 174/574 (30%), Positives = 282/574 (49%), Gaps = 108/574 (18%)
Query: 57 PNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEF 116
PN W+A+ G++QN ++ I + +M+ + PN T +L +C ++ L G+E
Sbjct: 14 PNASIWNAMFRGYSQNESHKDVIVLFRQMKGLDVMPNCFTFPVILKSCVKINALKEGEEV 73
Query: 117 HGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNV 176
H ++ ++GF +NPFV L+D+Y G + +A ++F +
Sbjct: 74 HCFVIKSGFRANPFVATTLIDMYASGGAIHAAYRVFGEM--------------------- 112
Query: 177 AEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGS 236
++R +I+W +MI+GY
Sbjct: 113 --------------IERNVIAWTAMINGY------------------------------- 127
Query: 237 VLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
I C D+ + R+ L + D + ++ Y +D++ A+ FD++ N +
Sbjct: 128 --ITCCDLVTARR-------LFDLAPERDIVLWNTMISGYIEAKDVIRARELFDKMPNKD 178
Query: 297 NLLGKMKEDGF-----------------EPNVYTWNAM-------QLFSEMLSL------ 326
+ +G+ E NV++WNA+ FSE+LS
Sbjct: 179 VMSWNTVLNGYASNGDVMACERLFEEMPERNVFSWNALIGGYTRNGCFSEVLSAFKRMLV 238
Query: 327 --DLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLK 384
+ P+ T+ +LSAC+ L ++ GK VH YA GY +V++ AL+DMYAKCG ++
Sbjct: 239 DGTVVPNDATLVNVLSACARLGALDLGKWVHVYAESHGYKGNVYVRNALMDMYAKCGVVE 298
Query: 385 HARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSACV 444
A +K + DL+S N ++ A+HGHG + + F + +G PD I+F+ L AC
Sbjct: 299 TALDVFKSMDNKDLISWNTIIGGLAVHGHGADALNLFSHMKIAGENPDGITFIGILCACT 358
Query: 445 HAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMW 503
H G ++ G +F M Y + P ++HY C+VDLL RAG L A +FI+K+P+ D+V+W
Sbjct: 359 HMGLVEDGFSYFKSMTDDYSIVPRIEHYGCIVDLLGRAGLLAHAVDFIRKMPIEADAVIW 418
Query: 504 GALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVMLANLFAYAGRWSDLARTRQKMKDR 563
ALLG C + N+E ++A ++LIE EP N NYVML+N++ GRW D+AR + M+D
Sbjct: 419 AALLGACRVYKNVELAELALEKLIEFEPKNPANYVMLSNIYGDFGRWKDVARLKVAMRDT 478
Query: 564 RMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIY 597
K PGCS IE D + +F + D H E+IY
Sbjct: 479 GFKKLPGCSLIEVNDYLVEFYSLDERHPEKEQIY 512
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 91/289 (31%), Positives = 150/289 (51%), Gaps = 13/289 (4%)
Query: 11 AKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFT 70
A+++F MP +D +SWN+V+ A+NG V+ E M N+ SW+A+IGG+T
Sbjct: 167 ARELFDKMPNKDVMSWNTVLNGYASNGDVMACERLFEEMPE-----RNVFSWNALIGGYT 221
Query: 71 QNGYDEEAIGMLFRMQAEG-LEPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNP 129
+NG E + RM +G + PN TL +VL ACARL L LGK H Y +G+ N
Sbjct: 222 RNGCFSEVLSAFKRMLVDGTVVPNDATLVNVLSACARLGALDLGKWVHVYAESHGYKGNV 281
Query: 130 FVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHL 189
+V N L+D+Y +CG + +AL +F K+ +S NTII G +G+ A+A LF M+
Sbjct: 282 YVRNALMDMYAKCGVVETALDVFKSMDNKDLISWNTIIGGLAVHGHGADALNLFSHMKIA 341
Query: 190 GVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRK 249
G I++ ++ L ++ FS F+ + I P +G ++ R
Sbjct: 342 GENPDGITFIGILCACTHMGLVEDGFSYFKSMTDDYSIVPRIEHYGCIVDLLG-----RA 396
Query: 250 GKEIHALAI--ALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIE 296
G HA+ + +++D + AL+ Y+++ A++A +++ E
Sbjct: 397 GLLAHAVDFIRKMPIEADAVIWAALLGACRVYKNVELAELALEKLIEFE 445
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 151/348 (43%), Gaps = 35/348 (10%)
Query: 179 ARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVL 238
A ++FDQ+ WN+M GY N + + +FR + D + P FTF +L
Sbjct: 4 AHKVFDQIPEPNAS----IWNAMFRGYSQNESHKDVIVLFRQMKGLD-VMPNCFTFPVIL 58
Query: 239 IACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENL 298
+C +N+L++G+E+H I G +++ FV L++MY + AA F E+
Sbjct: 59 KSCVKINALKEGEEVHCFVIKSGFRANPFVATTLIDMYASGGAIHAAYRVFGEM------ 112
Query: 299 LGKMKEDGFEPNVYTWNAM--------QLFSEMLSLDLTP--DIYTVGIILSACSSLATM 348
E NV W AM L + DL P DI ++S +
Sbjct: 113 --------IERNVIAWTAMINGYITCCDLVTARRLFDLAPERDIVLWNTMISGYIEAKDV 164
Query: 349 ERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAY 408
R +++ + DV +++ YA G + ++ + ++ S NA++ Y
Sbjct: 165 IRARELFDKMP----NKDVMSWNTVLNGYASNGDVMACERLFEEMPERNVFSWNALIGGY 220
Query: 409 AMHGHGKEGIAHFRRILASG-FRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPS 467
+G E ++ F+R+L G P+ + ++ LSAC G++ G + K +
Sbjct: 221 TRNGCFSEVLSAFKRMLVDGTVVPNDATLVNVLSACARLGALDLGKWVHVYAESHGYKGN 280
Query: 468 LKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGN 515
+ ++D+ ++ G + A + K + D + W ++GG HG+
Sbjct: 281 VYVRNALMDMYAKCGVVETALDVFKSMD-NKDLISWNTIIGGLAVHGH 327
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 72/151 (47%), Gaps = 9/151 (5%)
Query: 383 LKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSA 442
+++A + +I P+ NAM Y+ + K+ I FR++ P+ +F L +
Sbjct: 1 MENAHKVFDQIPEPNASIWNAMFRGYSQNESHKDVIVLFRQMKGLDVMPNCFTFPVILKS 60
Query: 443 CVHAGSIKTGSEF--FDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAPDS 500
CV ++K G E F + + + P + T ++D+ + G + AY ++ + +
Sbjct: 61 CVKINALKEGEEVHCFVIKSGFRANPFVA--TTLIDMYASGGAIHAAYRVFGEM-IERNV 117
Query: 501 VMWGALLGGCVSHGNLEFGQIAADRLIELEP 531
+ W A++ G ++ +L + A RL +L P
Sbjct: 118 IAWTAMINGYITCCDL----VTARRLFDLAP 144
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 69/183 (37%), Gaps = 37/183 (20%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG ++ A VFK M +D +SWN+++
Sbjct: 290 MYAKCGVVETALDVFKSMDNKDLISWNTII------------------------------ 319
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
GG +G+ +A+ + M+ G P+ T +L AC + + G + +
Sbjct: 320 ------GGLAVHGHGADALNLFSHMKIAGENPDGITFIGILCACTHMGLVEDGFSYFKSM 373
Query: 121 TRNGFMSNPFVVNG-LVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
T + + G +VD+ R G + A+ K I+ + ++G C E
Sbjct: 374 TDDYSIVPRIEHYGCIVDLLGRAGLLAHAVDFIRKMPIEADAVIWAALLGACRVYKNVEL 433
Query: 180 REL 182
EL
Sbjct: 434 AEL 436
>gi|356528451|ref|XP_003532816.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 579
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 184/601 (30%), Positives = 300/601 (49%), Gaps = 94/601 (15%)
Query: 4 KCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETP--NLVS 61
+ G +D A+K+F M +D V+WNS+++A NGL L+R +L + P N+VS
Sbjct: 41 RAGKVDAARKLFDEMATKDVVTWNSMLSAYWQNGL-------LQRSKALFHSMPLRNVVS 93
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYIT 121
W+++I QN ++A FR A E NA + ++++ AR
Sbjct: 94 WNSIIAACVQNDNLQDA----FRYLAAAPEKNAASYNAIISGLAR--------------- 134
Query: 122 RNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCE-NGNVAEAR 180
CG M A ++F N VS ++ GY G + AR
Sbjct: 135 --------------------CGRMKDAQRLFEAMPCPNVVSYTAMVDGYARVEGGIGRAR 174
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
LF+ M +R +SW MI+G V+N L +EA+ +F + ++ + T
Sbjct: 175 ALFEAMP----RRNSVSWVVMINGLVENGLCEEAWEVFVRMPQKNDVART---------- 220
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
A++ +C+ + A+ F EI + +
Sbjct: 221 ------------------------------AMITGFCKEGRMEDARDLFQEIRCRDLVSW 250
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
+ G+ N A+ LFS+M+ + PD T + AC+SLA++E G + HA I+
Sbjct: 251 NIIMTGYAQNGRGEEALNLFSQMIRTGMQPDDLTFVSVFIACASLASLEEGSKAHALLIK 310
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
G+DSD+ + AL+ +++KCG + + L + +IS PDLVS N ++ A+A HG + ++
Sbjct: 311 HGFDSDLSVCNALITVHSKCGGIVDSELVFGQISHPDLVSWNTIIAAFAQHGLYDKARSY 370
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMA-YYDVKPSLKHYTCMVDLLS 479
F +++ +PD I+FLS LSAC AG + F LM Y + P +HY C+VD++S
Sbjct: 371 FDQMVTVSVQPDGITFLSLLSACCRAGKVNESMNLFSLMVDNYGIPPRSEHYACLVDVMS 430
Query: 480 RAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYVM 539
RAG+L A + I ++P DS +WGA+L C H N+E G++AA R++ L+P N+G YVM
Sbjct: 431 RAGQLQRACKIINEMPFKADSSIWGAVLAACSVHLNVELGELAARRILNLDPFNSGAYVM 490
Query: 540 LANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEIYTI 599
L+N++A AG+W D+ R R MK++ + K SW++ ++ H F D SH +I+
Sbjct: 491 LSNIYAAAGKWKDVHRIRVLMKEQGVKKQTAYSWLQIGNKTHYFVGGDPSHPNINDIHVA 550
Query: 600 I 600
+
Sbjct: 551 L 551
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 207/427 (48%), Gaps = 21/427 (4%)
Query: 2 YGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVS 61
Y + G L +K +F MP R+ VSWNS++ AC N + +A L N S
Sbjct: 70 YWQNGLLQRSKALFHSMPLRNVVSWNSIIAACVQNDNLQDAFRYLAAAPE-----KNAAS 124
Query: 62 WSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQ-KLSLGKEFHGYI 120
++A+I G + G ++A + M PN + ++++ AR++ + + +
Sbjct: 125 YNAIISGLARCGRMKDAQRLFEAMPC----PNVVSYTAMVDGYARVEGGIGRARALFEAM 180
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R +S ++NGLV+ G A ++F + KN+V+ +I G+C+ G + +AR
Sbjct: 181 PRRNSVSWVVMINGLVE----NGLCEEAWEVFVRMPQKNDVARTAMITGFCKEGRMEDAR 236
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+LF ++ R ++SWN +++GY N +EA ++F ++ R G++P TF SV IA
Sbjct: 237 DLFQEIR----CRDLVSWNIIMTGYAQNGRGEEALNLFSQMI-RTGMQPDDLTFVSVFIA 291
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
CA + SL +G + HAL I G SD V AL+ ++ + +V +++ F +I + + +
Sbjct: 292 CASLASLEEGSKAHALLIKHGFDSDLSVCNALITVHSKCGGIVDSELVFGQISHPDLVSW 351
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI- 359
F + A F +M+++ + PD T +LSAC + + + +
Sbjct: 352 NTIIAAFAQHGLYDKARSYFDQMVTVSVQPDGITFLSLLSACCRAGKVNESMNLFSLMVD 411
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHA-RLAYKRISTPDLVSQNAMLTAYAMHGHGKEGI 418
G LVD+ ++ G L+ A ++ + D A+L A ++H + + G
Sbjct: 412 NYGIPPRSEHYACLVDVMSRAGQLQRACKIINEMPFKADSSIWGAVLAACSVHLNVELGE 471
Query: 419 AHFRRIL 425
RRIL
Sbjct: 472 LAARRIL 478
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 91/397 (22%), Positives = 173/397 (43%), Gaps = 55/397 (13%)
Query: 156 SIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAF 215
S ++ N IV G V AR+LFD+M + +++WNSM+S Y N L +
Sbjct: 25 STRDVYHANLDIVALSRAGKVDAARKLFDEM----ATKDVVTWNSMLSAYWQNGLLQRSK 80
Query: 216 SMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEM 275
++F + +R+ + ++ S++ AC ++L+ LA A + ++ A++
Sbjct: 81 ALFHSMPLRNVV-----SWNSIIAACVQNDNLQDA--FRYLAAAPEKNAASY--NAIISG 131
Query: 276 YCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAM---------------QLF 320
R + AQ F+ + PNV ++ AM LF
Sbjct: 132 LARCGRMKDAQRLFEAMPC--------------PNVVSYTAMVDGYARVEGGIGRARALF 177
Query: 321 SEMLSLDLTPDIYTVG--IILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYA 378
M P +V ++++ E +V +R +DV TA++ +
Sbjct: 178 EAM------PRRNSVSWVVMINGLVENGLCEEAWEVF---VRMPQKNDV-ARTAMITGFC 227
Query: 379 KCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLS 438
K G ++ AR ++ I DLVS N ++T YA +G G+E + F +++ +G +PD ++F+S
Sbjct: 228 KEGRMEDARDLFQEIRCRDLVSWNIIMTGYAQNGRGEEALNLFSQMIRTGMQPDDLTFVS 287
Query: 439 ALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFIKKIPMAP 498
AC S++ GS+ L+ + L ++ + S+ G + ++ +I P
Sbjct: 288 VFIACASLASLEEGSKAHALLIKHGFDSDLSVCNALITVHSKCGGIVDSELVFGQISH-P 346
Query: 499 DSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTG 535
D V W ++ HG + + D+++ + G
Sbjct: 347 DLVSWNTIIAAFAQHGLYDKARSYFDQMVTVSVQPDG 383
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 89/201 (44%), Gaps = 21/201 (10%)
Query: 366 DVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRIL 425
DV+ + ++ G + AR + ++T D+V+ N+ML+AY +G + A F +
Sbjct: 28 DVYHANLDIVALSRAGKVDAARKLFDEMATKDVVTWNSMLSAYWQNGLLQRSKALFHSMP 87
Query: 426 ASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKP--SLKHYTCMVDLLSRAGE 483
+S+ S ++ACV +++ D Y P + Y ++ L+R G
Sbjct: 88 LRNV----VSWNSIIAACVQNDNLQ------DAFRYLAAAPEKNAASYNAIISGLARCGR 137
Query: 484 LGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEP-NNTGNYVMLAN 542
+ +A + +P P+ V + A++ G + +E G A L E P N+ ++V++ N
Sbjct: 138 MKDAQRLFEAMP-CPNVVSYTAMVDG---YARVEGGIGRARALFEAMPRRNSVSWVVMIN 193
Query: 543 LFAYAG----RWSDLARTRQK 559
G W R QK
Sbjct: 194 GLVENGLCEEAWEVFVRMPQK 214
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 65/172 (37%), Gaps = 37/172 (21%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
++ KCG + D++ VF + D VSWN+++ A
Sbjct: 326 VHSKCGGIVDSELVFGQISHPDLVSWNTIIAA---------------------------- 357
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
F Q+G ++A +M ++P+ T S+L AC R K++ +
Sbjct: 358 --------FAQHGLYDKARSYFDQMVTVSVQPDGITFLSLLSACCRAGKVNESMNLFSLM 409
Query: 121 TRN-GFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYC 171
N G LVDV R G + A KI ++ K + S ++ C
Sbjct: 410 VDNYGIPPRSEHYACLVDVMSRAGQLQRACKIINEMPFKADSSIWGAVLAAC 461
>gi|19697432|gb|AAL93067.1|AC093180_14 hypothetical protein [Oryza sativa Japonica Group]
Length = 1012
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 168/532 (31%), Positives = 279/532 (52%), Gaps = 37/532 (6%)
Query: 60 VSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGY 119
V W+A++ +++N E A + +M+ G +PN L+SVL A L + LGK HG
Sbjct: 229 VVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGC 288
Query: 120 ITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEA 179
+ + P V L+D+Y +CGD + +A
Sbjct: 289 AIKTLNDTEPHVGGALLDMYAKCGD-------------------------------IKDA 317
Query: 180 RELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLI 239
R F+ + + +I + MIS Y ++ ++AF +F L MR + P ++ SVL
Sbjct: 318 RLAFEMIPY----DDVILLSFMISRYAQSNQNEQAFELFLRL-MRSSVLPNEYSLSSVLQ 372
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
AC +M L GK+IH AI +G +SD FVG AL++ Y + D+ ++ F + + +
Sbjct: 373 ACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVS 432
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAI 359
GF + A+ +F EM + + T +L AC+S A++ Q+H
Sbjct: 433 WNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIE 492
Query: 360 RCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIA 419
+ +++D IG +L+D YAKCG ++ A ++ + D++S NA+++ YA+HG + +
Sbjct: 493 KSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALE 552
Query: 420 HFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAY-YDVKPSLKHYTCMVDLL 478
F R+ S + I+F++ LS C G + G FD M + +KPS++HYTC+V LL
Sbjct: 553 LFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLL 612
Query: 479 SRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGNYV 538
RAG L +A +FI IP AP +++W ALL C+ H N+ G+ +A++++E+EP + YV
Sbjct: 613 GRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILEIEPQDETTYV 672
Query: 539 MLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSH 590
+L+N++A AG +A R+ M++ + K PG SW+E + EIH F H
Sbjct: 673 LLSNMYAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKGEIHAFSVGSVDH 724
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 131/536 (24%), Positives = 226/536 (42%), Gaps = 79/536 (14%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MYGK G L A+++F MPER+ VS+ ++V A A
Sbjct: 105 MYGKLGPLASARRLFDRMPERNMVSFVTLVQAHA-------------------------- 138
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
Q G E A + R++ EG E N L+++L + L H
Sbjct: 139 ----------QRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCA 188
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G N FV +GL+D Y C + A +F+ K+ V ++ Y EN A
Sbjct: 189 WKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAF 248
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIA 240
+F +M G +P F SVL A
Sbjct: 249 RVFSKMR------------------------------------VSGCKPNPFALTSVLKA 272
Query: 241 CADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLG 300
+ S+ GK IH AI ++ VGGAL++MY + D+ A++AF+ I + +L
Sbjct: 273 AVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILL 332
Query: 301 KMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIR 360
+ + A +LF ++ + P+ Y++ +L AC+++ ++ GKQ+H +AI+
Sbjct: 333 SFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIK 392
Query: 361 CGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAH 420
G++SD+ +G AL+D YAKC + + + + + VS N ++ ++ G G+E ++
Sbjct: 393 IGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSV 452
Query: 421 FRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSR 480
F + A+ +++ S L AC SI+ + + ++D ++
Sbjct: 453 FCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAK 512
Query: 481 AGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGN 536
G + +A + + + M D + W A++ G HG AAD L + N N
Sbjct: 513 CGYIRDALKVFQHL-MERDIISWNAIISGYALHGQ------AADALELFDRMNKSN 561
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 127/500 (25%), Positives = 222/500 (44%), Gaps = 54/500 (10%)
Query: 99 SVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIK 158
++LP+ + + ++ G I R G V+G V RR G + L +F
Sbjct: 49 AILPSVPGVDSFACARQLQGCIAR-GDARGGRAVHG--HVVRRGG--VGRLDLFC----- 98
Query: 159 NEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMF 218
N ++ Y + G +A AR LFD+M +R ++S+ +++ + ++ A ++F
Sbjct: 99 ----ANVLLNMYGKLGPLASARRLFDRMP----ERNMVSFVTLVQAHAQRGDFEAAAALF 150
Query: 219 RDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCR 278
R L +G E F ++L M++ +H+ A LG + FVG L++ Y
Sbjct: 151 RRLRW-EGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSL 209
Query: 279 YQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGII 338
+ A+ F+ I + ++ + N NA ++FS+M P+ + + +
Sbjct: 210 CSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSV 269
Query: 339 LSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDL 398
L A L ++ GK +H AI+ D++ H+G AL+DMYAKCG +K ARLA++ I D+
Sbjct: 270 LKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDV 329
Query: 399 VSQNAMLTAYAMHGHGKEGIAHFRRILASGFRPDHISFLSALSAC-----------VHAG 447
+ + M++ YA ++ F R++ S P+ S S L AC +H
Sbjct: 330 ILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNH 389
Query: 448 SIKTG--SEFF---DLMAYY----DVKPSLKHYTCMVDL-----------LSRAGELGEA 487
+IK G S+ F LM +Y D+ SLK ++ + D S++G EA
Sbjct: 390 AIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEA 449
Query: 488 YEF---IKKIPMAPDSVMWGALLGGCVSHGNLEF-GQIAADRLIELEPNNTGNYVMLANL 543
++ M V + ++L C S ++ GQI N+T L +
Sbjct: 450 LSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDT 509
Query: 544 FAYAGRWSDLARTRQKMKDR 563
+A G D + Q + +R
Sbjct: 510 YAKCGYIRDALKVFQHLMER 529
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 111/428 (25%), Positives = 179/428 (41%), Gaps = 76/428 (17%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCG + DA+ F+M+P D ++
Sbjct: 307 MYAKCGDIKDARLAFEMIPYDD------------------------------------VI 330
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
S +I + Q+ +E+A + R+ + PN +LSSVL AC + +L GK+ H +
Sbjct: 331 LLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHA 390
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
+ G S+ FV N L+D Y +C DM S+LKIFS NEVS NTI+VG+ ++G
Sbjct: 391 IKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSG------ 444
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEP-TSFTFGSVLI 239
L +EA S+F + M+ P T T+ SVL
Sbjct: 445 -----------------------------LGEEALSVFCE--MQAAQMPCTQVTYSSVLR 473
Query: 240 ACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLL 299
ACA S+R +IH +DT +G +L++ Y + + A F + + +
Sbjct: 474 ACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIIS 533
Query: 300 GKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVH-AYA 358
G+ + +A++LF M ++ + T +LS CSS + G + +
Sbjct: 534 WNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMR 593
Query: 359 IRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRI-STPDLVSQNAMLTAYAMHGHGKEG 417
I G + T +V + + G L A I S P + A+L++ +H + G
Sbjct: 594 IDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALG 653
Query: 418 IAHFRRIL 425
+IL
Sbjct: 654 RFSAEKIL 661
>gi|449451283|ref|XP_004143391.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570-like [Cucumis sativus]
gi|449519310|ref|XP_004166678.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570-like [Cucumis sativus]
Length = 565
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 169/521 (32%), Positives = 273/521 (52%), Gaps = 46/521 (8%)
Query: 56 TPNLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKE 115
+P+ W++++ G+ + I + RM+ E P+ T S+L CA K+ G
Sbjct: 89 SPSTFLWNSLVSGYCAKLQFVDIISLYVRMKREDGAPDRYTFPSLLKVCASEGKMMEGMA 148
Query: 116 FHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGN 175
HG I R G + +V LV++Y + G + A K+F S +N VS +IVGY GN
Sbjct: 149 LHGSILRCGVDEDIYVTTSLVNLYGKGGLIDCARKVFDGMSERNVVSWTAMIVGYSSIGN 208
Query: 176 VAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFG 235
+ EA+ LFD M +R + SWN++I GY+ A F ++ ++ + SFT
Sbjct: 209 LVEAKRLFDLMP----ERNVASWNAIIGGYMKMGDVKSAEKAFDEMPEKNVV---SFT-- 259
Query: 236 SVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENI 295
+++ Y + D+++A+ F +
Sbjct: 260 -----------------------------------TMIDGYAKAGDMLSARNLFQKAPER 284
Query: 296 ENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVH 355
+ + G+ N A++ F EM S ++ PD + + ++ ACS L ++ K V
Sbjct: 285 DIIAWSALISGYTQNGQPNEAVKTFLEMSSRNVKPDKFVLTSLMLACSQLGNLDLAKWVD 344
Query: 356 AYAIRCGYD-SDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHG 414
+YA RC D H+ AL+DM AKCG+++ A ++++ DL+S +++ ++HGHG
Sbjct: 345 SYATRCSVDLRGAHVTAALIDMNAKCGNMERAMYLFEKMPKRDLISYCSVMQGLSIHGHG 404
Query: 415 KEGIAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTC 473
+ ++ F R+L PD ++F L+AC AG + G +F++M Y + PS+ HY C
Sbjct: 405 DQAVSLFERMLGEDLTPDDVAFTVILTACSRAGLVDEGWHYFEMMRCKYSMVPSVDHYAC 464
Query: 474 MVDLLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNN 533
+VDLLSR+G L EAYE IK +P+ + WGALLG C + + E ++ A RLIE+EP N
Sbjct: 465 IVDLLSRSGRLKEAYELIKSVPVQSHAGAWGALLGACKLYCDSELAEVVASRLIEIEPEN 524
Query: 534 TGNYVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWI 574
GNYV+L+N++A A RW D++ R +M +R + K PGCSWI
Sbjct: 525 AGNYVLLSNIYAAADRWLDVSAVRNQMNERGLRKIPGCSWI 565
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 163/362 (45%), Gaps = 70/362 (19%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLD------- 53
+YGK G +D A+KVF M ER+ VSW +++ ++ G ++EA + M +
Sbjct: 171 LYGKGGLIDCARKVFDGMSERNVVSWTAMIVGYSSIGNLVEAKRLFDLMPERNVASWNAI 230
Query: 54 -----------------NETP--NLVS-------------------------------WS 63
+E P N+VS WS
Sbjct: 231 IGGYMKMGDVKSAEKAFDEMPEKNVVSFTTMIDGYAKAGDMLSARNLFQKAPERDIIAWS 290
Query: 64 AVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYITRN 123
A+I G+TQNG EA+ M + ++P+ L+S++ AC++L L L K Y TR
Sbjct: 291 ALISGYTQNGQPNEAVKTFLEMSSRNVKPDKFVLTSLMLACSQLGNLDLAKWVDSYATRC 350
Query: 124 GF-MSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAREL 182
+ V L+D+ +CG+M A+ +F K ++ +S +++ G +G+ +A L
Sbjct: 351 SVDLRGAHVTAALIDMNAKCGNMERAMYLFEKMPKRDLISYCSVMQGLSIHGHGDQAVSL 410
Query: 183 FDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACA 242
F++M + +++ +++ L DE + F + + + P+ + ++
Sbjct: 411 FERMLGEDLTPDDVAFTVILTACSRAGLVDEGWHYFEMMRCKYSMVPSVDHYACIV---- 466
Query: 243 DMNSLRKG--KEIHALAIALGLQSDTFVGGALV---EMYCRYQ--DLVAAQMAFDEIENI 295
D+ S R G KE + L ++ +QS GAL+ ++YC + ++VA+++ E EN
Sbjct: 467 DLLS-RSGRLKEAYELIKSVPVQSHAGAWGALLGACKLYCDSELAEVVASRLIEIEPENA 525
Query: 296 EN 297
N
Sbjct: 526 GN 527
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 141/324 (43%), Gaps = 21/324 (6%)
Query: 252 EIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNV 311
++HA I GL+ D+F+ + + + FD + + L G+ +
Sbjct: 47 QVHAHLIQKGLEQDSFLVTQFISASNSVAHISYSTSVFDRVLSPSTFLWNSLVSGYCAKL 106
Query: 312 YTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGT 371
+ + L+ M D PD YT +L C+S M G +H +RCG D D+++ T
Sbjct: 107 QFVDIISLYVRMKREDGAPDRYTFPSLLKVCASEGKMMEGMALHGSILRCGVDEDIYVTT 166
Query: 372 ALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILASGFRP 431
+LV++Y K G + AR + +S ++VS AM+ Y+ G+ E +R+
Sbjct: 167 SLVNLYGKGGLIDCARKVFDGMSERNVVSWTAMIVGYSSIGNLVEA----KRLFDLMPER 222
Query: 432 DHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRAGELGEAYEFI 491
+ S+ + + + G +K+ + FD M +V +T M+D ++AG++ A
Sbjct: 223 NVASWNAIIGGYMKMGDVKSAEKAFDEMPEKNVVS----FTTMIDGYAKAGDMLSARNLF 278
Query: 492 KKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTG--NYVMLANLFAYA-- 547
+K P D + W AL+ G +G A +E+ N +V+ + + A +
Sbjct: 279 QKAP-ERDIIAWSALISGYTQNGQ---PNEAVKTFLEMSSRNVKPDKFVLTSLMLACSQL 334
Query: 548 -----GRWSDLARTRQKMKDRRMH 566
+W D TR + R H
Sbjct: 335 GNLDLAKWVDSYATRCSVDLRGAH 358
>gi|242034539|ref|XP_002464664.1| hypothetical protein SORBIDRAFT_01g023020 [Sorghum bicolor]
gi|241918518|gb|EER91662.1| hypothetical protein SORBIDRAFT_01g023020 [Sorghum bicolor]
Length = 650
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 187/541 (34%), Positives = 276/541 (51%), Gaps = 70/541 (12%)
Query: 91 EPNARTLSSVLPACARLQKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALK 150
P+ T +L ACARLQ G G++ + GF ++ FVVN V + G M+ A
Sbjct: 118 RPDHLTFPFLLKACARLQYRPYGAAVLGHVQKLGFSADVFVVNAGVHFWSVSGSMVLA-- 175
Query: 151 IFSKFSIKNEVSCNTIIVGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSL 210
R LFD+ R ++SWN++I GYV + L
Sbjct: 176 -----------------------------RRLFDE----SPARDVVSWNTLIGGYVRSGL 202
Query: 211 YDEAFSMFRDLLMRDG--IEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFV 268
EA +F L+ DG + P T + CA M L GK +H + G++ +
Sbjct: 203 PREALELFWRLV-EDGKAVRPDEVTMIGAVSGCAQMGDLELGKRLHEFVDSKGVRCTVRL 261
Query: 269 GGALVEMYCRYQDLVAAQMAFDEIENIENL-----------LGKMKE------DGFEPNV 311
A+++MY + L A+ F+ I+N + LG M++ + E +V
Sbjct: 262 MNAVMDMYVKCGSLELAKSVFERIDNKTVVSWTTMIVGHARLGMMEDARMLFDEMPERDV 321
Query: 312 YTWNAMQ--------------LFSEMLSLDLTPDIYTVGIILSACSSLATMERGKQVHAY 357
+ WNA+ LF EM + P+ T+ +LSACS L +E G VH Y
Sbjct: 322 FPWNALMAGYVQNKQGKEAIALFHEMQESKVDPNEITMVNLLSACSQLGALEMGMWVHHY 381
Query: 358 AIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKRISTPDLVSQNAMLTAYAMHGHGKEG 417
R V +GT+LVDMYAKCG++K A +K I + ++ AM+ A HGH E
Sbjct: 382 IDRHQLYLSVALGTSLVDMYAKCGNIKKAICIFKEIPDKNALTWTAMICGLANHGHADEA 441
Query: 418 IAHFRRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLM-AYYDVKPSLKHYTCMVD 476
I +F+R++ G +PD I+F+ LSAC HAG +K G +FF LM Y ++ +KHY+CM+D
Sbjct: 442 IEYFQRMIDLGLQPDEITFIGVLSACCHAGLVKEGRQFFSLMHEKYHLERKMKHYSCMID 501
Query: 477 LLSRAGELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIELEPNNTGN 536
LL RAG L EA + + +PM PD+V+WGAL C HGN+ G+ AA +L+EL+P+++G
Sbjct: 502 LLGRAGHLDEAEQLVNTMPMDPDAVVWGALFFACRMHGNITLGEKAAMKLVELDPSDSGI 561
Query: 537 YVMLANLFAYAGRWSDLARTRQKMKDRRMHKSPGCSWIEDRDEIHKFRASDRSHDRSEEI 596
YV+LAN++A A + R M+ + K PGCS IE +H+F D+SH + I
Sbjct: 562 YVLLANMYAEANMRKKADKVRVMMRHLGVEKVPGCSCIELNGVVHEFIVKDKSHLDTIAI 621
Query: 597 Y 597
Y
Sbjct: 622 Y 622
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 102/367 (27%), Positives = 183/367 (49%), Gaps = 11/367 (2%)
Query: 52 LDNETP--NLVSWSAVIGGFTQNGYDEEAIGMLFRMQAEG--LEPNARTLSSVLPACARL 107
L +E+P ++VSW+ +IGG+ ++G EA+ + +R+ +G + P+ T+ + CA++
Sbjct: 178 LFDESPARDVVSWNTLIGGYVRSGLPREALELFWRLVEDGKAVRPDEVTMIGAVSGCAQM 237
Query: 108 QKLSLGKEFHGYITRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTII 167
L LGK H ++ G ++N ++D+Y +CG + A +F + K VS T+I
Sbjct: 238 GDLELGKRLHEFVDSKGVRCTVRLMNAVMDMYVKCGSLELAKSVFERIDNKTVVSWTTMI 297
Query: 168 VGYCENGNVAEARELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGI 227
VG+ G + +AR LFD+M +R + WN++++GYV N EA ++F + + +
Sbjct: 298 VGHARLGMMEDARMLFDEMP----ERDVFPWNALMAGYVQNKQGKEAIALFHE-MQESKV 352
Query: 228 EPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVEMYCRYQDLVAAQM 287
+P T ++L AC+ + +L G +H L +G +LV+MY + ++ A
Sbjct: 353 DPNEITMVNLLSACSQLGALEMGMWVHHYIDRHQLYLSVALGTSLVDMYAKCGNIKKAIC 412
Query: 288 AFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLSLDLTPDIYTVGIILSACSSLAT 347
F EI + L G + + A++ F M+ L L PD T +LSAC
Sbjct: 413 IFKEIPDKNALTWTAMICGLANHGHADEAIEYFQRMIDLGLQPDEITFIGVLSACCHAGL 472
Query: 348 MERGKQVHAYAI-RCGYDSDVHIGTALVDMYAKCGSLKHA-RLAYKRISTPDLVSQNAML 405
++ G+Q + + + + + ++D+ + G L A +L PD V A+
Sbjct: 473 VKEGRQFFSLMHEKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNTMPMDPDAVVWGALF 532
Query: 406 TAYAMHG 412
A MHG
Sbjct: 533 FACRMHG 539
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 115/218 (52%), Gaps = 5/218 (2%)
Query: 1 MYGKCGSLDDAKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLV 60
MY KCGSL+ AK VF+ + + VSW +++ A G++ +A + M D +
Sbjct: 268 MYVKCGSLELAKSVFERIDNKTVVSWTTMIVGHARLGMMEDARMLFDEMPERD-----VF 322
Query: 61 SWSAVIGGFTQNGYDEEAIGMLFRMQAEGLEPNARTLSSVLPACARLQKLSLGKEFHGYI 120
W+A++ G+ QN +EAI + MQ ++PN T+ ++L AC++L L +G H YI
Sbjct: 323 PWNALMAGYVQNKQGKEAIALFHEMQESKVDPNEITMVNLLSACSQLGALEMGMWVHHYI 382
Query: 121 TRNGFMSNPFVVNGLVDVYRRCGDMLSALKIFSKFSIKNEVSCNTIIVGYCENGNVAEAR 180
R+ + + LVD+Y +CG++ A+ IF + KN ++ +I G +G+ EA
Sbjct: 383 DRHQLYLSVALGTSLVDMYAKCGNIKKAICIFKEIPDKNALTWTAMICGLANHGHADEAI 442
Query: 181 ELFDQMEHLGVQRGIISWNSMISGYVDNSLYDEAFSMF 218
E F +M LG+Q I++ ++S L E F
Sbjct: 443 EYFQRMIDLGLQPDEITFIGVLSACCHAGLVKEGRQFF 480
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 153/348 (43%), Gaps = 34/348 (9%)
Query: 215 FSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDTFVGGALVE 274
++R LL P TF +L ACA + G + LG +D FV A V
Sbjct: 105 LPLYRALLCSSSARPDHLTFPFLLKACARLQYRPYGAAVLGHVQKLGFSADVFVVNAGVH 164
Query: 275 MYCRYQDLVAAQMAFDEIENIENLLGKMKEDGFEPNVYTWNAMQLFSEMLS--LDLTPDI 332
+ +V A+ FDE + + G+ + A++LF ++ + PD
Sbjct: 165 FWSVSGSMVLARRLFDESPARDVVSWNTLIGGYVRSGLPREALELFWRLVEDGKAVRPDE 224
Query: 333 YTVGIILSACSSLATMERGKQVHAYAIRCGYDSDVHIGTALVDMYAKCGSLKHARLAYKR 392
T+ +S C+ + +E GK++H + G V + A++DMY KCGSL+ A+ ++R
Sbjct: 225 VTMIGAVSGCAQMGDLELGKRLHEFVDSKGVRCTVRLMNAVMDMYVKCGSLELAKSVFER 284
Query: 393 ISTPDLVS-------------------------------QNAMLTAYAMHGHGKEGIAHF 421
I +VS NA++ Y + GKE IA F
Sbjct: 285 IDNKTVVSWTTMIVGHARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALF 344
Query: 422 RRILASGFRPDHISFLSALSACVHAGSIKTGSEFFDLMAYYDVKPSLKHYTCMVDLLSRA 481
+ S P+ I+ ++ LSAC G+++ G + + + S+ T +VD+ ++
Sbjct: 345 HEMQESKVDPNEITMVNLLSACSQLGALEMGMWVHHYIDRHQLYLSVALGTSLVDMYAKC 404
Query: 482 GELGEAYEFIKKIPMAPDSVMWGALLGGCVSHGNLEFGQIAADRLIEL 529
G + +A K+IP +++ W A++ G +HG+ + R+I+L
Sbjct: 405 GNIKKAICIFKEIP-DKNALTWTAMICGLANHGHADEAIEYFQRMIDL 451
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.136 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,499,444,025
Number of Sequences: 23463169
Number of extensions: 394253360
Number of successful extensions: 1124066
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 9609
Number of HSP's successfully gapped in prelim test: 2274
Number of HSP's that attempted gapping in prelim test: 867536
Number of HSP's gapped (non-prelim): 81519
length of query: 601
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 452
effective length of database: 8,863,183,186
effective search space: 4006158800072
effective search space used: 4006158800072
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 80 (35.4 bits)