Query 045110
Match_columns 376
No_of_seqs 235 out of 1458
Neff 7.1
Searched_HMMs 29240
Date Mon Mar 25 17:27:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045110.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045110hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rkg_A Magnesium transporter M 100.0 1.6E-51 5.5E-56 386.6 7.5 235 20-306 13-261 (261)
2 2iub_A CORA, divalent cation t 100.0 3.2E-40 1.1E-44 326.5 0.3 277 21-374 68-363 (363)
3 4ev6_A Magnesium transport pro 100.0 1E-38 3.5E-43 313.0 1.7 282 20-374 46-339 (339)
4 4egw_A Magnesium transport pro 99.7 1.2E-17 4.2E-22 159.0 5.5 218 20-308 46-280 (280)
5 3nvo_A Zinc transport protein 99.5 8.1E-15 2.8E-19 137.9 6.7 165 21-205 39-218 (264)
6 3ck6_A Putative membrane trans 99.5 2.4E-14 8.1E-19 133.8 4.4 201 25-307 32-252 (252)
7 2bbh_A Divalent cation transpo 99.4 1.4E-13 4.6E-18 129.8 2.0 169 21-204 59-242 (269)
8 2hn1_A CORA, magnesium and cob 99.3 2.3E-13 7.7E-18 128.3 1.5 168 21-205 64-243 (266)
9 3v86_A De novo design helix; c 65.4 10 0.00035 21.7 3.7 25 176-200 2-26 (27)
10 2iub_A CORA, divalent cation t 63.6 1.3 4.4E-05 42.8 -0.4 92 274-372 263-358 (363)
11 1txp_A HnRNP C, heterogeneous 62.2 10 0.00034 22.5 3.4 25 177-201 2-26 (28)
12 1nfn_A Apolipoprotein E3; lipi 56.6 24 0.00081 30.8 6.6 60 144-204 69-129 (191)
13 1gs9_A Apolipoprotein E, APOE4 54.3 31 0.0011 29.3 6.9 58 144-202 69-127 (165)
14 2ks1_B Epidermal growth factor 50.1 8.3 0.00028 25.6 1.9 13 360-372 27-39 (44)
15 2l2t_A Receptor tyrosine-prote 48.4 9.2 0.00031 25.4 1.9 13 360-372 26-38 (44)
16 2k1k_A Ephrin type-A receptor 38.1 16 0.00056 23.3 1.8 12 361-372 27-38 (38)
17 3ck6_A Putative membrane trans 37.7 9.1 0.00031 34.4 0.8 15 142-156 152-166 (252)
18 2l7b_A Apolipoprotein E, APO-E 37.2 72 0.0025 29.9 7.0 114 142-289 75-190 (307)
19 2k21_A Potassium voltage-gated 33.0 7.5 0.00026 31.8 -0.5 31 342-372 49-79 (138)
20 3swf_A CGMP-gated cation chann 31.7 33 0.0011 25.3 2.9 21 177-197 35-55 (74)
21 2jwa_A Receptor tyrosine-prote 27.8 36 0.0012 22.5 2.2 16 358-373 25-40 (44)
22 3r2p_A Apolipoprotein A-I; amp 27.4 52 0.0018 28.2 3.9 52 150-202 58-110 (185)
23 3s84_A Apolipoprotein A-IV; fo 26.3 1.1E+02 0.0037 28.1 6.1 109 103-289 21-142 (273)
24 1z23_A CRK-associated substrat 23.1 24 0.00084 30.1 0.9 69 134-202 4-73 (163)
25 4egw_A Magnesium transport pro 23.0 13 0.00045 34.0 -0.9 35 276-310 241-279 (280)
26 4ev6_A Magnesium transport pro 21.8 3.4 0.00012 39.3 -5.3 99 267-372 235-334 (339)
No 1
>3rkg_A Magnesium transporter MRS2, mitochondrial; matrix located domain, hydrophobic GATE magnesium binding site, metal transport; 1.28A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-51 Score=386.56 Aligned_cols=235 Identities=27% Similarity=0.426 Sum_probs=213.7
Q ss_pred ccccceeEEEeccCCccccc--chhhHHhhhhhcccccccccccCC-CCCcccccccceEEeecchhhhhhccccccccC
Q 045110 20 TAVSSSWILLDREAQSTTLD--VDKHVIMRRVQIHARDLRILDPML-NYPSTILGREKVIVLNLEHIKAIITADEVLLRD 96 (376)
Q Consensus 20 ~~~~~~w~~id~~g~~~~~~--~~k~~l~~~~~L~~RDlr~ld~~~-~~~~~I~~R~~~Ilvnle~i~~II~~d~vl~f~ 96 (376)
+....+|++||..|+++.++ ++|++|++++||+|||||+|||.+ +++|+|++|++|||||++||||||++|+|++|+
T Consensus 13 ~~~~~~ct~fD~~G~~~~~~~~~~K~~l~~~~~L~~RDLR~ld~~~~~~~PsIl~R~~aIlvnL~~irAII~~d~Vllfd 92 (261)
T 3rkg_A 13 DSLFISCTVFNSKGNIISMSEKFPKWSFLTEHSLFPRDLRKIDNSSIDIIPTIMCKPNCIVINLLHIKALIERDKVYVFD 92 (261)
T ss_dssp GGGEEEEEEECTTSCEEEEEEEEEHHHHHHHTTCCGGGGGGTSSCCSSCCCEEEECSSCEEEEETTEEEEECSSCEEEEC
T ss_pred CCceEEEEEECCCCCEEEecccccHHHHHHHcCCChhhHHHhcccccCCCceEEecCCeEEEechhceEEEEcceEEEEc
Confidence 33478999999999999986 999999999999999999999985 688899999999999999999999999999999
Q ss_pred CCCCCcc----hhHHHHHhhhcCCCCCccCCCCcccCCCCccCcch---hh----hhhhhhhhhccccccccccchHHHh
Q 045110 97 PMDDNVI----PIVEQLQRRLASDYPISQGQGEEEDNHPGVRNNFE---TE----AICSFLDARTRELETDAYPALDELT 165 (376)
Q Consensus 97 ~~~~~~~----~f~~~L~~rL~~~~~~~~~~~~~~~~~~~~~LpfE---Le----av~~~l~~~~~~Le~~~~~~ld~L~ 165 (376)
+.++.+. .|+.+++.|+..+. .+.+||| || ++|+.|++++..+|..+.++|++|.
T Consensus 93 ~~~~~~~~~~~~f~~~l~~~l~~~~--------------~~~lPFEfraLEa~L~~v~~~Le~e~~~l~~~~~~~L~~L~ 158 (261)
T 3rkg_A 93 TTNPSAAAKLSVLMYDLESKLSSTK--------------NNSQFYEHRALESIFINVMSALETDFKLHSQICIQILNDLE 158 (261)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHCSS--------------CCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCchhhhhHHHHHHHHHHHhccCC--------------CCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8875443 48899999997642 2589999 55 4689999999999999999999999
Q ss_pred hhhcccchhHHHhhHHHHHHHHHHHHHHHHHHHhhcCCCcchhhhHHhhhhccccCCCCCCCCCcccccCCCcccccccc
Q 045110 166 SKISSRNLDRVRKLKSAMTRLTNRVQKVRDELEQLLDDDDDMADLYLSRKLAVASSPVSGSGAPHWFLNSPTIGSKISRT 245 (376)
Q Consensus 166 ~~~~~~~L~~l~~lK~~L~~l~~~v~~vre~l~~lL~dd~dm~~m~Lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (376)
+++++..|++|+..|++|+.+.++++.+|++|+++|++|+||+.||||++..
T Consensus 159 ~~i~~~~L~~Ll~~~k~L~~~~~kv~~vr~~leelLddDeDm~~myLT~k~~---------------------------- 210 (261)
T 3rkg_A 159 NEVNRLKLRHLLIKSKDLTLFYQKTLLIRDLLDELLENDDDLANMYLTVKKS---------------------------- 210 (261)
T ss_dssp HSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHTCCSSCCC----------------------------
T ss_pred hcCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHcCHHHHHHhhccCCCC----------------------------
Confidence 9999999999999999999999999999999999999999999999999742
Q ss_pred cccccceeecCcCCHHHHHHHHHHHHhhhcccchhhhhhhhhhcCcccceeeeccccccce
Q 045110 246 ISRGSMETTQEENDVEELEMLLEAYFMQIDGTLNKLSTLREYIDDTEDYINIQLDNHRNQL 306 (376)
Q Consensus 246 ~~~~~~~~~~~~~~~eelE~LLE~y~~~~~~~~~~~~~l~~~i~~~~~~~~~~l~~~~N~~ 306 (376)
..++|+|+|||||+||+|+|+++++++.++++|++|||++++.||++||++
T Consensus 211 ----------~~~d~eElEmLLE~Y~~q~d~~~~~~~~L~~~I~~TEe~i~i~LD~~RN~L 261 (261)
T 3rkg_A 211 ----------PKDNFSDLEMLIETYYTQCDEYVQQSESLIQDIKSTEEIVNIILDANRNSL 261 (261)
T ss_dssp ----------TTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC---
T ss_pred ----------CccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCC
Confidence 256889999999999999999999999999999999999999999999985
No 2
>2iub_A CORA, divalent cation transport-related protein; membrane protein, ION transporter; 2.9A {Thermotoga maritima} SCOP: d.328.1.1 f.17.3.1 PDB: 2hn2_A 2bbj_A
Probab=100.00 E-value=3.2e-40 Score=326.55 Aligned_cols=277 Identities=16% Similarity=0.242 Sum_probs=210.7
Q ss_pred cccceeEEEeccCCcccccchhhHHhhhhhcccccccccccCCCCCcccccccceE--Eee------------cchhhhh
Q 045110 21 AVSSSWILLDREAQSTTLDVDKHVIMRRVQIHARDLRILDPMLNYPSTILGREKVI--VLN------------LEHIKAI 86 (376)
Q Consensus 21 ~~~~~w~~id~~g~~~~~~~~k~~l~~~~~L~~RDlr~ld~~~~~~~~I~~R~~~I--lvn------------le~i~~I 86 (376)
.+...|+.+++..+.+.+ ..|.+.+|||+-.+.++... .++|++...++++ +++ .+++.++
T Consensus 68 ~~~~~Wi~l~~p~~~~e~----~~l~~~f~l~~l~ied~l~~-~~rpk~e~~~~~lfivl~~~~~~~~~~~~~~~~v~~~ 142 (363)
T 2iub_A 68 SSTPTWINITGIHRTDVV----QRVGEFFGIHPLVLEDILNV-HQRPKVEFFENYVFIVLKMFTYDKNLHELESEQVSLI 142 (363)
T ss_dssp CSSCEEEEEECTTCHHHH----HHHHHHTTCCHHHHHHHHCC-SSCCEEEEETTEEEEEEEEEEEETTTTEEEEEEEEEE
T ss_pred CCCeEEEEeCCCCCHHHH----HHHHHHcCcChhHHHHHhCC-CCCCeEEEECCEEEEEEEeeeecccccccceEEEEEE
Confidence 456889999887655666 78889999999999887654 6788998888766 332 3468999
Q ss_pred hccccccccCCCCCCcchhHHHHHhhhcCCCCCccCCCCcccCCCCccCcch-hhhhhhhhhhhccccccccccchHHHh
Q 045110 87 ITADEVLLRDPMDDNVIPIVEQLQRRLASDYPISQGQGEEEDNHPGVRNNFE-TEAICSFLDARTRELETDAYPALDELT 165 (376)
Q Consensus 87 I~~d~vl~f~~~~~~~~~f~~~L~~rL~~~~~~~~~~~~~~~~~~~~~LpfE-Leav~~~l~~~~~~Le~~~~~~ld~L~ 165 (376)
++.|+|++|...+. +.++.+++|+....+..+.. +++++.|. ||++++.+...++.+++++..+++.+.
T Consensus 143 l~~~~liTv~~~~~---~~~~~v~~rl~~~~~~~~~~-------~~~~ll~~lld~ivd~y~~~l~~l~~~id~lE~~v~ 212 (363)
T 2iub_A 143 LTKNCVLMFQEKIG---DVFDPVRERIRYNRGIIRKK-------RADYLLYSLIDALVDDYFVLLEKIDDEIDVLEEEVL 212 (363)
T ss_dssp EETTEEEEEESSSC---CSCHHHHHHHHTTCTTTTTS-------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EECCEEEEEEeCCC---chHHHHHHHHHhcCCccccC-------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999987753 46889999997664443332 45678888 999998888888888888888888877
Q ss_pred hhhcccchhHHHhhHHHHHHHHHHHHHHHHHHHhhcCCCcchhhhHHhhhhccccCCCCCCCCCcccccCCCcccccccc
Q 045110 166 SKISSRNLDRVRKLKSAMTRLTNRVQKVRDELEQLLDDDDDMADLYLSRKLAVASSPVSGSGAPHWFLNSPTIGSKISRT 245 (376)
Q Consensus 166 ~~~~~~~L~~l~~lK~~L~~l~~~v~~vre~l~~lL~dd~dm~~m~Lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (376)
++.+...+++|+.+|+++..+++.++|.+++++.|.+.+....
T Consensus 213 ~~~~~~~l~~l~~lrr~l~~lrr~l~p~~~vl~~L~~~~~~~~------------------------------------- 255 (363)
T 2iub_A 213 ERPEKETVQRTHQLKRNLVELRKTIWPLREVLSSLYRDVPPLI------------------------------------- 255 (363)
T ss_dssp SSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCSSSC-------------------------------------
T ss_pred cCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccC-------------------------------------
Confidence 7666677999999999999999999999999999987653311
Q ss_pred cccccceeecCcCCHHHHHHHHHHHHhh----hcccchhhhhhhhhhcCcccceeeeccccccceeEEEEEeeccceehh
Q 045110 246 ISRGSMETTQEENDVEELEMLLEAYFMQ----IDGTLNKLSTLREYIDDTEDYINIQLDNHRNQLIQLELFLCSGTVCLS 321 (376)
Q Consensus 246 ~~~~~~~~~~~~~~~eelE~LLE~y~~~----~~~~~~~~~~l~~~i~~~~~~~~~~l~~~~N~~m~~~l~Lti~t~i~~ 321 (376)
.++. ..|++| +..+.+.++.+++.++.+.+.+...+++++|++|| +||++|+||+
T Consensus 256 --------------~~~~----~~~lrDv~d~~~~~~e~~~~~re~l~~l~d~~~s~is~~~N~imk---~LTiit~Ifl 314 (363)
T 2iub_A 256 --------------EKET----VPYFRDVYDHTIQIADTVETFRDIVSGLLDVYLSSVSNKTNEVMK---VLTIIATIFM 314 (363)
T ss_dssp --------------HHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHH
T ss_pred --------------CHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHH
Confidence 0122 345555 45677888889999999999999999999999999 7999999999
Q ss_pred HHHHHHHHhccCcceeeecCCceEEEEeeeehhHHHHHHHHHHHHHhhhccCC
Q 045110 322 VYSLVAAIFGMNIPYTWKTGHGYVFKWVVVITGIVCALLFSIIIFYARHKGLV 374 (376)
Q Consensus 322 ~~t~IaGifGMN~~~~pe~~~~~gf~~v~~~~~~~~~~i~~~~~~~fkrk~wl 374 (376)
|+|||||+|||||++|||++|+||||+++++ |+++++++++||||||||
T Consensus 315 P~T~IaGiyGMNf~~mPel~~~~Gy~~~l~~----m~~i~~~~~~~Fkrk~Wl 363 (363)
T 2iub_A 315 PLTFIAGIYGMNFEYMPELRWKWGYPVVLAV----MGVIAVIMVVYFKKKKWL 363 (363)
T ss_dssp HHHHHTTSCC--------------CHHHHHH----HHHHHHHHHTTTTSCC--
T ss_pred HHHHHHhhhcccCCCCCcccCcHHHHHHHHH----HHHHHHHHHHHHHHcccC
Confidence 9999999999999999999999999888773 345567789999999997
No 3
>4ev6_A Magnesium transport protein CORA; membrane protein, ION transporter, metal TR; HET: UMQ; 3.20A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=1e-38 Score=313.04 Aligned_cols=282 Identities=15% Similarity=0.156 Sum_probs=224.2
Q ss_pred ccccceeEEEeccCCcccccchhhHHhhhhhcccccccccccCCCCCcccccccceEEe--e---------cchhhhhhc
Q 045110 20 TAVSSSWILLDREAQSTTLDVDKHVIMRRVQIHARDLRILDPMLNYPSTILGREKVIVL--N---------LEHIKAIIT 88 (376)
Q Consensus 20 ~~~~~~w~~id~~g~~~~~~~~k~~l~~~~~L~~RDlr~ld~~~~~~~~I~~R~~~Ilv--n---------le~i~~II~ 88 (376)
......|+.+....+.+ + ..|.+.+|+|+-.++++... .++|++...++..++ + ..++..+++
T Consensus 46 ~d~~~vWIdl~~Pt~~E-~----~~l~~~~~l~~~~~ed~l~~-~~rpk~e~~~~~~~iv~~~~~~~~~~~~~~v~i~l~ 119 (339)
T 4ev6_A 46 EDYRLIWIDCYDPKDEE-L----YKLSKKIGISVSDLQIGLDE-QEIPRVEEDEDFYLIIYKAPLFEEDITTTSLGIYIK 119 (339)
T ss_dssp SSCSCEEEEEESCCHHH-H----HHHHHHHTCCHHHHHHHHCT-TCCCEEEEETTEEEEECCCCCCTTTCCCCCCEEEEE
T ss_pred cCCCEEEEEeCCCCHHH-H----HHHHHHHCcCHhHHHHhhCC-ccCCeEEEECCEEEEEEecCccCCCcceEEEEEEEE
Confidence 34567899987654432 3 67889999999999876653 678888888886533 2 347889999
Q ss_pred cccccccCCCCCCcchhHHHHHhhhcCCCCCccCCCCcccCCCCccCcch-hhhhhhhhhhhccccccccccchHHHhhh
Q 045110 89 ADEVLLRDPMDDNVIPIVEQLQRRLASDYPISQGQGEEEDNHPGVRNNFE-TEAICSFLDARTRELETDAYPALDELTSK 167 (376)
Q Consensus 89 ~d~vl~f~~~~~~~~~f~~~L~~rL~~~~~~~~~~~~~~~~~~~~~LpfE-Leav~~~l~~~~~~Le~~~~~~ld~L~~~ 167 (376)
.+++++|...+. +.++.+++++..+.+..... .+++++.|. |+++++.+...++.+++++..+.+.+.++
T Consensus 120 ~~~lITv~~~~~---~~~~~~~~~~~~~~~~~~~~------~~~~~ll~~lld~ivd~~~~~l~~l~~~i~~lE~~l~~~ 190 (339)
T 4ev6_A 120 NNLLLTIHSDKI---KAIGRLHKLISTKKPRIVFE------RGIGFLLYHILNEITRSYSRILMNLEDELEELEDKLLAG 190 (339)
T ss_dssp TTEEEEEESSCC---HHHHHHHHHSSSSSSCCCCC------SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTC
T ss_pred CCeeEEeecCCc---chhHHHHHHHHcCCCccccc------cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 999999987654 67899999998765543211 045678888 99999888888888888888777777777
Q ss_pred hcccchhHHHhhHHHHHHHHHHHHHHHHHHHhhcCCCcchhhhHHhhhhccccCCCCCCCCCcccccCCCcccccccccc
Q 045110 168 ISSRNLDRVRKLKSAMTRLTNRVQKVRDELEQLLDDDDDMADLYLSRKLAVASSPVSGSGAPHWFLNSPTIGSKISRTIS 247 (376)
Q Consensus 168 ~~~~~L~~l~~lK~~L~~l~~~v~~vre~l~~lL~dd~dm~~m~Lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (376)
.+++.++++..+|+++..+++.+.|.++++..+.+.+....
T Consensus 191 ~~~~~l~~l~~lrr~l~~lrr~l~~~~~vl~~L~~~~~~~~--------------------------------------- 231 (339)
T 4ev6_A 191 YDREVMEKILGLRKTLVYFHKSLIANRDVLVLLKRKYLPIT--------------------------------------- 231 (339)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCBTTB---------------------------------------
T ss_pred hhhhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhhcccccc---------------------------------------
Confidence 77788999999999999999999999999999876543210
Q ss_pred cccceeecCcCCHHHHHHHHHHHHhhhcccchhhhhhhhhhcCcccceeeeccccccceeEEEEEeeccceehhHHHHHH
Q 045110 248 RGSMETTQEENDVEELEMLLEAYFMQIDGTLNKLSTLREYIDDTEDYINIQLDNHRNQLIQLELFLCSGTVCLSVYSLVA 327 (376)
Q Consensus 248 ~~~~~~~~~~~~~eelE~LLE~y~~~~~~~~~~~~~l~~~i~~~~~~~~~~l~~~~N~~m~~~l~Lti~t~i~~~~t~Ia 327 (376)
.++....++..+.++..+.+.++.+++.+..+.+.+...+++++|++|| +||++|++|+|+||||
T Consensus 232 ------------~~~~~~~l~dv~~~~~~l~e~~~~~~e~l~~l~d~~~s~is~~~N~~mk---~LTiit~IflP~T~Ia 296 (339)
T 4ev6_A 232 ------------TKEDRENFEDLYYDTLQLIDMSATYREVLTSMMDITLSLENIKMNQIMK---ILTMVTTIFAVPMWIT 296 (339)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHSSHHHHHH
T ss_pred ------------chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHH
Confidence 0122222344445556678888889999999999999999999999999 6999999999999999
Q ss_pred HHhccCcceeeecCCceEEEEeeeehhHHHHHHHHHHHHHhhhccCC
Q 045110 328 AIFGMNIPYTWKTGHGYVFKWVVVITGIVCALLFSIIIFYARHKGLV 374 (376)
Q Consensus 328 GifGMN~~~~pe~~~~~gf~~v~~~~~~~~~~i~~~~~~~fkrk~wl 374 (376)
|+|||||++|||++|+||||+++++ |+++++++++||||||||
T Consensus 297 GiyGMNf~~mPel~~~~gy~~~l~~----m~~~~~~~~~~fkrk~WL 339 (339)
T 4ev6_A 297 GIYGMNFSYLPLANNPQGFWLVMAL----MVVIIMIFVYIFRRSGWI 339 (339)
T ss_dssp HHTTCCCSCCTTSSCTTHHHHHHHH----HHHHHHHHHHHHHTTTCC
T ss_pred hhccCcCCCCCCccCchHHHHHHHH----HHHHHHHHHHHHHHcCCC
Confidence 9999999999999999999888763 445557789999999997
No 4
>4egw_A Magnesium transport protein CORA; magnesium transporter, magnesium binding, metal transp; 2.50A {Methanocaldococcus jannaschii}
Probab=99.69 E-value=1.2e-17 Score=158.96 Aligned_cols=218 Identities=14% Similarity=0.109 Sum_probs=165.6
Q ss_pred ccccceeEEEeccCCcccccchhhHHhhhhhcccccccccccCCCCCcccccccceE--Eee---------cchhhhhhc
Q 045110 20 TAVSSSWILLDREAQSTTLDVDKHVIMRRVQIHARDLRILDPMLNYPSTILGREKVI--VLN---------LEHIKAIIT 88 (376)
Q Consensus 20 ~~~~~~w~~id~~g~~~~~~~~k~~l~~~~~L~~RDlr~ld~~~~~~~~I~~R~~~I--lvn---------le~i~~II~ 88 (376)
...++.|+.+.+.... .+ ..|.+++||||..++++... .++|++...++++ +++ .+++.++++
T Consensus 46 ~d~~~vWIdl~~Pt~e-El----~~l~~~f~lh~l~leD~l~~-~~rpKie~~~d~~fivl~~~~~~~~~~t~~v~i~l~ 119 (280)
T 4egw_A 46 EDYRLIWIDCYDPKDE-EL----YKLSKKIGISVSDLQIGLDE-QEIPRVEEDEDFYLIIYKAPLFEEDITTTSLGIYIK 119 (280)
T ss_dssp TSSSCEEEEEESCCHH-HH----HHHHHHHTCCHHHHHHHTCT-TCCCEEECCSSSEEEEEEEEECSSSCEEEEEEEEEE
T ss_pred CCCeEEEEEeCCCCHH-HH----HHHHHHHCcCHHHHHHHhCc-ccCceEEEECCEEEEEEEeccccccceeeeEEEEEE
Confidence 3457789999776543 23 67889999999999876653 6788999888865 333 347889999
Q ss_pred cccccccCCCCCCcchhHHHHHhhhcCCCCCcc-CCCCcccCCCCccCcch-hhhhhhhhhhhccccccccccchHHHhh
Q 045110 89 ADEVLLRDPMDDNVIPIVEQLQRRLASDYPISQ-GQGEEEDNHPGVRNNFE-TEAICSFLDARTRELETDAYPALDELTS 166 (376)
Q Consensus 89 ~d~vl~f~~~~~~~~~f~~~L~~rL~~~~~~~~-~~~~~~~~~~~~~LpfE-Leav~~~l~~~~~~Le~~~~~~ld~L~~ 166 (376)
.++|++|+..+. +.++.+++|+....++.. .. +++++.|. |+++++.+...++.+++.+..+.+.+.+
T Consensus 120 ~~~lITv~~~~~---~~~~~v~~~l~~~~~~~~~~~-------g~~~ll~~lld~ivd~y~~~l~~i~~~id~lE~~l~~ 189 (280)
T 4egw_A 120 NNLLLTIHSDKI---KAIGRLHKLISTKKPRIVFER-------GIGFLLYHILNEITRSYSRILMNLEDELEELEDKLLA 189 (280)
T ss_dssp TTEEEEEESSCC---HHHHHHHHHHHHSCCSSSCTT-------TTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred CCEEEEEecCCc---chHHHHHHHHHhcCccccccc-------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999987754 678999999987665433 22 56889999 9999999999999999998888888888
Q ss_pred hhcccchhHHHhhHHHHHHHHHHHHHHHHHHHhhcCCCcchhhhHHhhhhccccCCCCCCCCCcccccCCCccccccccc
Q 045110 167 KISSRNLDRVRKLKSAMTRLTNRVQKVRDELEQLLDDDDDMADLYLSRKLAVASSPVSGSGAPHWFLNSPTIGSKISRTI 246 (376)
Q Consensus 167 ~~~~~~L~~l~~lK~~L~~l~~~v~~vre~l~~lL~dd~dm~~m~Lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (376)
+.++..+.+|+.+|++|..|++.++|.++++..|.+.+.... +
T Consensus 190 ~~~~~~l~~i~~lrr~l~~lrr~l~p~~~vl~~L~~~~~~~~----~--------------------------------- 232 (280)
T 4egw_A 190 GYDREVMEKILGLRKTLVYFHKSLIANRDVLVLLKRKYLPIT----T--------------------------------- 232 (280)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCSSC----C---------------------------------
T ss_pred CCchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCcccC----C---------------------------------
Confidence 888888999999999999999999999999999986554321 0
Q ss_pred ccccceeecCcCCHHHHHHHHHHHHhhh----cccchhhhhhhhhhcCcccceeeeccccccceeE
Q 045110 247 SRGSMETTQEENDVEELEMLLEAYFMQI----DGTLNKLSTLREYIDDTEDYINIQLDNHRNQLIQ 308 (376)
Q Consensus 247 ~~~~~~~~~~~~~~eelE~LLE~y~~~~----~~~~~~~~~l~~~i~~~~~~~~~~l~~~~N~~m~ 308 (376)
++ ...||+|+ ..+.+.++.+++.+..+.+.+...+++++|++||
T Consensus 233 --------------~~----~~~~l~Dv~dh~~~~~e~~~~~re~l~~l~d~~~s~is~~~N~iMK 280 (280)
T 4egw_A 233 --------------KE----DRENFEDLYYDTLQLIDMSATYREVLTSMMDITLSLENIKMNQIMK 280 (280)
T ss_dssp --------------HH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--------
T ss_pred --------------HH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 11 24677775 4456677788888888888999999999999997
No 5
>3nvo_A Zinc transport protein ZNTB; alpha-beta-alpha sandwich, zinc efflux system, membrane, TRA protein; 2.30A {Salmonella enterica} PDB: 3nwi_A
Probab=99.52 E-value=8.1e-15 Score=137.88 Aligned_cols=165 Identities=8% Similarity=0.046 Sum_probs=131.3
Q ss_pred cccceeEEEeccCCcccccchhhHHhhhhhcccccccccccCCCCCcccccccceEEe--------------ecchhhhh
Q 045110 21 AVSSSWILLDREAQSTTLDVDKHVIMRRVQIHARDLRILDPMLNYPSTILGREKVIVL--------------NLEHIKAI 86 (376)
Q Consensus 21 ~~~~~w~~id~~g~~~~~~~~k~~l~~~~~L~~RDlr~ld~~~~~~~~I~~R~~~Ilv--------------nle~i~~I 86 (376)
++...|+.++.... ... ..|.+.+|||+..+..+... .++|++...++++++ ..++++++
T Consensus 39 ~~~~~Wi~l~~p~~-~e~----~~l~~~~~l~~l~~ed~~~~-~~rpk~e~~~~~~fivl~~~~~~~~~~~~~~~~v~~~ 112 (264)
T 3nvo_A 39 SQHPCWLHLNYTHP-DSA----RWLASTPLLPNNVRDALAGE-SSRPRVSRMGEGTLITLRCINGSTDERPDQLVAMRLY 112 (264)
T ss_dssp TTSCEEEEEETTSH-HHH----HHHHHCTTSCTTTHHHHTTC-CCSCEEEEETTEEEEEEECC----------CCEEEEE
T ss_pred CCCCEEEEeCCCCH-HHH----HHHHhccCCCHHHHHHHhCC-CCCCceEEECCEEEEEEEecccCCCCCCcceEEEEEE
Confidence 56789999987433 344 77889999999999877753 688999988887644 23478899
Q ss_pred hccccccccCCCCCCcchhHHHHHhhhcCCCCCccCCCCcccCCCCccCcch-hhhhhhhhhhhccccccccccchHHHh
Q 045110 87 ITADEVLLRDPMDDNVIPIVEQLQRRLASDYPISQGQGEEEDNHPGVRNNFE-TEAICSFLDARTRELETDAYPALDELT 165 (376)
Q Consensus 87 I~~d~vl~f~~~~~~~~~f~~~L~~rL~~~~~~~~~~~~~~~~~~~~~LpfE-Leav~~~l~~~~~~Le~~~~~~ld~L~ 165 (376)
++.++|++|...+. ++++.+++|+..+.+. . +++++.|. |+++++.+...++.+++.+..+.+.+.
T Consensus 113 l~~~~lITv~~~~~---~~~~~v~~rl~~~~~~---~-------~~~~ll~~lld~ivd~y~~~l~~l~~~id~lE~~l~ 179 (264)
T 3nvo_A 113 MDERFIVSTRQRKV---LALDDVVSDLQEGTGP---V-------DCGGWLVDVCDALTDHASEFIEELHDKIIDLEDNLL 179 (264)
T ss_dssp ECSSEEEEEESSCC---HHHHHHHHHHHTTCSC---S-------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC--
T ss_pred EeCCEEEEEecCCc---CcHHHHHHHHHhCCCC---C-------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999997743 6899999999765432 1 45678888 999998888888888888877777777
Q ss_pred hhhcccchhHHHhhHHHHHHHHHHHHHHHHHHHhhcCCCc
Q 045110 166 SKISSRNLDRVRKLKSAMTRLTNRVQKVRDELEQLLDDDD 205 (376)
Q Consensus 166 ~~~~~~~L~~l~~lK~~L~~l~~~v~~vre~l~~lL~dd~ 205 (376)
++ +...+.+|+.+|+++..|++.++|.++++.+|.+.+.
T Consensus 180 ~~-~~~~l~~l~~lrr~l~~lrr~l~p~~~vl~~L~~~~~ 218 (264)
T 3nvo_A 180 DQ-QIPPRGFLALLRKQLIVMRRYMAPQRDVYARLASERL 218 (264)
T ss_dssp ---CCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred cC-CchhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCC
Confidence 66 7778999999999999999999999999999987654
No 6
>3ck6_A Putative membrane transport protein; APC91421.1, ZNTB, cytoplasmic domain, PSI-2, protein structure initiative; HET: MSE; 1.90A {Vibrio parahaemolyticus rimd 2210633} PDB: 3bhc_A*
Probab=99.46 E-value=2.4e-14 Score=133.85 Aligned_cols=201 Identities=8% Similarity=0.044 Sum_probs=150.8
Q ss_pred eeEEEeccCCcccccchhhHHhhhhhcccccccccccCCCCCcccccccc-eE--Eeecc------------hhhhhhcc
Q 045110 25 SWILLDREAQSTTLDVDKHVIMRRVQIHARDLRILDPMLNYPSTILGREK-VI--VLNLE------------HIKAIITA 89 (376)
Q Consensus 25 ~w~~id~~g~~~~~~~~k~~l~~~~~L~~RDlr~ld~~~~~~~~I~~R~~-~I--lvnle------------~i~~II~~ 89 (376)
.|+.++... .... ..|.+. |+|+-.+..+... .++|++...++ ++ +++.. .++++++.
T Consensus 32 ~Wi~l~~p~-~~e~----~~l~~~-~l~~l~~ed~l~~-~~rpk~e~~~d~~lfivl~~~~~~~~~~~~~~~~l~i~l~~ 104 (252)
T 3ck6_A 32 HWYHCERLH-PDIR----GWLEDN-HVPRATVDHLLAD-ESRPSFHPLDDDNFMLILRGINMNENASPEDMLSIRILYFQ 104 (252)
T ss_dssp EEEEEETTC-TTHH----HHHHHT-TCCHHHHHHHHCS-SCCCEEEECSTTCEEEEEEECCCSTTCCTTSCEEEEEEEET
T ss_pred EEEEecCCC-HHHH----HHHHHc-CCCHHHHHHHhCC-CCCCceEEeCCceEEEEEecCccCCCCCcccEEEEEEEEeC
Confidence 999998865 3444 677888 9999999887764 78899999999 77 44421 24669999
Q ss_pred ccccccCCCCCCcchhHHHHHhhhcCCCCCccCCCCcccCCCCccCcch-hhhhhhhhhhhccccccccccchHHHhhhh
Q 045110 90 DEVLLRDPMDDNVIPIVEQLQRRLASDYPISQGQGEEEDNHPGVRNNFE-TEAICSFLDARTRELETDAYPALDELTSKI 168 (376)
Q Consensus 90 d~vl~f~~~~~~~~~f~~~L~~rL~~~~~~~~~~~~~~~~~~~~~LpfE-Leav~~~l~~~~~~Le~~~~~~ld~L~~~~ 168 (376)
++|+++...+. +.++.+++|+..+.+. . +++++.|. |+++++.+...++.+++.+..+++.
T Consensus 105 ~~lITvr~~~~---~~~~~v~~~l~~~~~~---~-------~~~~ll~~lld~ivd~y~~~l~~l~~~id~lE~~----- 166 (252)
T 3ck6_A 105 GALISTRKIPS---RAIMEIRQALAEHKGP---K-------SLASLLNQIIEGLNGKIDLYLDTIEETLNEFDVN----- 166 (252)
T ss_dssp TEEEEEESSCC---HHHHHHHHHHHTTCSC---S-------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTT-----
T ss_pred CEEEEEeCCCc---chHHHHHHHHHhCCCC---C-------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-----
Confidence 99999997754 6789999999665431 1 34667777 9999888888788877777666554
Q ss_pred cccchhHHHhhHHHHHHHHHHHHHHHHHHHhhcCCCcchhhhHHhhhhccccCCCCCCCCCcccccCCCccccccccccc
Q 045110 169 SSRNLDRVRKLKSAMTRLTNRVQKVRDELEQLLDDDDDMADLYLSRKLAVASSPVSGSGAPHWFLNSPTIGSKISRTISR 248 (376)
Q Consensus 169 ~~~~L~~l~~lK~~L~~l~~~v~~vre~l~~lL~dd~dm~~m~Lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (376)
...+.+|+.+|+++..|++.++|.|+++.+|.+.+..+ .+.
T Consensus 167 -~~~~~~l~~lrr~l~~lrr~l~p~r~~l~~L~r~~~~~-----~~~--------------------------------- 207 (252)
T 3ck6_A 167 -DESTYNHIAAQKALISIKRFIRPQQYAIRDLIESESEL-----VTS--------------------------------- 207 (252)
T ss_dssp -CGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHH-----HHT---------------------------------
T ss_pred -chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCC-----CHH---------------------------------
Confidence 23578999999999999999999999999998765431 111
Q ss_pred ccceeecCcCCHHHHHHHHHHHHhhh----cccchhhhhhhhhhcCcccceeeecccccccee
Q 045110 249 GSMETTQEENDVEELEMLLEAYFMQI----DGTLNKLSTLREYIDDTEDYINIQLDNHRNQLI 307 (376)
Q Consensus 249 ~~~~~~~~~~~~eelE~LLE~y~~~~----~~~~~~~~~l~~~i~~~~~~~~~~l~~~~N~~m 307 (376)
...||+++ ..+.+.++.+++.+..+.+.+...+++++|++|
T Consensus 208 ------------------~~~~~rdv~d~~~~~~e~i~~~re~~~~l~d~~~s~~s~~~N~~m 252 (252)
T 3ck6_A 208 ------------------RPHQYRFAHNNITRINETIEFYLGEVALFQDEIKHNRDEKTNKNS 252 (252)
T ss_dssp ------------------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----
T ss_pred ------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 13566665 456778889999999999999999999999987
No 7
>2bbh_A Divalent cation transport-related protein; transporter, Mg, membrane, structural genomics, structural G consortium, SGC; HET: DMU; 1.85A {Thermotoga maritima} SCOP: d.328.1.1
Probab=99.35 E-value=1.4e-13 Score=129.83 Aligned_cols=169 Identities=14% Similarity=0.187 Sum_probs=130.8
Q ss_pred cccceeEEEeccCCcccccchhhHHhhhhhcccccccccccCCCCCcccccccceE--Eee------------cchhhhh
Q 045110 21 AVSSSWILLDREAQSTTLDVDKHVIMRRVQIHARDLRILDPMLNYPSTILGREKVI--VLN------------LEHIKAI 86 (376)
Q Consensus 21 ~~~~~w~~id~~g~~~~~~~~k~~l~~~~~L~~RDlr~ld~~~~~~~~I~~R~~~I--lvn------------le~i~~I 86 (376)
++...|+.+++..+...+ ..|.+.+|||+-.+..+... .++|++...++++ +++ .+++.++
T Consensus 59 ~~~~~Wi~l~~p~~~~e~----~~l~~~f~l~~l~~ed~l~~-~~rpk~e~~~d~lfivl~~~~~~~~~~~~~~~~v~~~ 133 (269)
T 2bbh_A 59 SSTPTWINITGIHRTDVV----QRVGEFFGTHPLVLEDILNV-HQRPKVEFFENYVFIVLKMFTYDKNLHELESEQVSLI 133 (269)
T ss_dssp CSSCEEEEEECTTCHHHH----HHHHHHHTCCHHHHHHHHCT-TCCCEEEECSSEEEEEEEEEECCC--CCCEEEEEEEE
T ss_pred CCCeEEEEecCCCCHHHH----HHHHHHcCCCHhHHHHHhCc-CCCceEEEECCEEEEEEEeeeecCCcCceeEEEEEEE
Confidence 446889999887666666 78889999999988887654 6788998888866 333 2367899
Q ss_pred hccccccccCCCCCCcchhHHHHHhhhcCCCCCccCCCCcccCCCCccCcch-hhhhhhhhhhhccccccccccchHHHh
Q 045110 87 ITADEVLLRDPMDDNVIPIVEQLQRRLASDYPISQGQGEEEDNHPGVRNNFE-TEAICSFLDARTRELETDAYPALDELT 165 (376)
Q Consensus 87 I~~d~vl~f~~~~~~~~~f~~~L~~rL~~~~~~~~~~~~~~~~~~~~~LpfE-Leav~~~l~~~~~~Le~~~~~~ld~L~ 165 (376)
++.++|++|...+. +.++.+++|+....+..+.. +++++.|. |+++++.+...++.+++.+..+.+.+.
T Consensus 134 l~~~~lITv~~~~~---~~~~~v~~rl~~~~~~~~~~-------~~~~ll~~lld~ivd~y~~~l~~i~~~id~lE~~v~ 203 (269)
T 2bbh_A 134 LTKNCVLMFQEKIG---DVFDPVRERIRYNRGIIRKK-------RADYLLYSLIDALVDDYFVLLEKIDDEIDVLEEEVL 203 (269)
T ss_dssp EETTEEEEEESSSC---CSCHHHHHHHHTTCTTGGGS-------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-
T ss_pred EECCEEEEEECCCC---CcHHHHHHHHHhcCCchhhC-------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999987753 46789999997764433322 45678888 999998888888888888877777777
Q ss_pred hhhcccchhHHHhhHHHHHHHHHHHHHHHHHHHhhcCCC
Q 045110 166 SKISSRNLDRVRKLKSAMTRLTNRVQKVRDELEQLLDDD 204 (376)
Q Consensus 166 ~~~~~~~L~~l~~lK~~L~~l~~~v~~vre~l~~lL~dd 204 (376)
++.+...+.+|+.+|+++..|++.++|.++++..|.+.+
T Consensus 204 ~~~~~~~l~~l~~lrr~l~~lrr~l~p~~~vl~~L~~~~ 242 (269)
T 2bbh_A 204 ERPEKETVQRTHQLKRNLVELRKTIWPLREVLSSLYRDV 242 (269)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 666678899999999999999999999999999998653
No 8
>2hn1_A CORA, magnesium and cobalt transporter; integral membrane protein fragment, metal transporter protei divalent cations, metal transport; 2.90A {Archaeoglobus fulgidus}
Probab=99.32 E-value=2.3e-13 Score=128.25 Aligned_cols=168 Identities=15% Similarity=0.153 Sum_probs=137.3
Q ss_pred cccceeEEEeccCCcccccchhhHHhhhhhcccccccccccCCCCCcccccccceE--Eee---------cchhhhhhcc
Q 045110 21 AVSSSWILLDREAQSTTLDVDKHVIMRRVQIHARDLRILDPMLNYPSTILGREKVI--VLN---------LEHIKAIITA 89 (376)
Q Consensus 21 ~~~~~w~~id~~g~~~~~~~~k~~l~~~~~L~~RDlr~ld~~~~~~~~I~~R~~~I--lvn---------le~i~~II~~ 89 (376)
.+...|+.+++..+...+ ..|.+.+|||+-.+..+... .++|++...++++ +++ .+++.++++.
T Consensus 64 ~~~~~Wi~l~~p~~~~e~----~~l~~~f~l~~l~~ed~l~~-~~rpk~e~~~d~lfivl~~~~~~~~~~~~~v~~~l~~ 138 (266)
T 2hn1_A 64 LNKKLWIDVVGVHDESLI----AKICEFLGIHPLAAEDILNT-AQRVKIEDYDDHLFLVLKILLYNETLEIDQLSLVLKK 138 (266)
T ss_dssp TTSEEEEEECCCCCHHHH----HHHHHTTTCCHHHHHHHHBT-TCCSEEEECSSEEEEEEEEEEESSSEEEEEEEEEEET
T ss_pred CCCeEEEEeCCCCCHHHH----HHHHHHcCCCHhHHHHHhCC-CCCCeEEEECCEEEEEEEeccccCccceEEEEEEEEC
Confidence 457899999887666666 78889999999988877653 6888999888876 333 3578999999
Q ss_pred ccccccCCCCCCcchhHHHHHhhhcCCCCCccCCCCcccCCCCccCcch-hhhhhhhhhhhccccccccccchHHHhhhh
Q 045110 90 DEVLLRDPMDDNVIPIVEQLQRRLASDYPISQGQGEEEDNHPGVRNNFE-TEAICSFLDARTRELETDAYPALDELTSKI 168 (376)
Q Consensus 90 d~vl~f~~~~~~~~~f~~~L~~rL~~~~~~~~~~~~~~~~~~~~~LpfE-Leav~~~l~~~~~~Le~~~~~~ld~L~~~~ 168 (376)
|+|++|...+. +.++.+++|+..+ +..+.. +++++.|. |+++++.+...++.+++.+..+.+.+.++.
T Consensus 139 ~~lITv~~~~~---~~~~~v~~rl~~~-~~~~~~-------~~~~ll~~lld~ivd~y~~~l~~i~~~id~lE~~l~~~~ 207 (266)
T 2hn1_A 139 NLVATFEEREY---WILDSIRSRLKSG-GRMRKL-------AGDYLAYTILDAVVDSYFEALLKISDEIEVLEDEVVSGD 207 (266)
T ss_dssp TEEEEEESSSS---CSTHHHHHHHHSS-SHHHHS-------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred CEEEEEEcCCC---ChHHHHHHHHHhC-Cchhhc-------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 99999987753 4678999999765 322212 45778888 999999999999999999888888887766
Q ss_pred cccchhHHHhhHHHHHHHHHHHHHHHHHHHhhcCCCc
Q 045110 169 SSRNLDRVRKLKSAMTRLTNRVQKVRDELEQLLDDDD 205 (376)
Q Consensus 169 ~~~~L~~l~~lK~~L~~l~~~v~~vre~l~~lL~dd~ 205 (376)
+ ..+.+|+.+|+++..|++.++|.++++.+|.+.+.
T Consensus 208 ~-~~l~~l~~lrr~l~~lrr~l~p~~~vl~~L~~~~~ 243 (266)
T 2hn1_A 208 S-TLIGKIHSLKREILAFRNAVWPLRDVLSFFTRVEH 243 (266)
T ss_dssp C-CCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHCCC
T ss_pred H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 6 88999999999999999999999999999987653
No 9
>3v86_A De novo design helix; computational design of A protein crystal, helical coil, DE designed helix, de novo protein; 2.91A {Synthetic}
Probab=65.36 E-value=10 Score=21.66 Aligned_cols=25 Identities=32% Similarity=0.558 Sum_probs=21.5
Q ss_pred HHhhHHHHHHHHHHHHHHHHHHHhh
Q 045110 176 VRKLKSAMTRLTNRVQKVRDELEQL 200 (376)
Q Consensus 176 l~~lK~~L~~l~~~v~~vre~l~~l 200 (376)
++++|.+.-+++..++.+++++.++
T Consensus 2 vyqlkdevgelkgevralkdevkdl 26 (27)
T 3v86_A 2 VYQLKDEVGELKGEVRALKDEVKDL 26 (27)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchhhHHHHHHHhHHHHHHHHHhcc
Confidence 5789999999999999999988765
No 10
>2iub_A CORA, divalent cation transport-related protein; membrane protein, ION transporter; 2.9A {Thermotoga maritima} SCOP: d.328.1.1 f.17.3.1 PDB: 2hn2_A 2bbj_A
Probab=63.64 E-value=1.3 Score=42.77 Aligned_cols=92 Identities=11% Similarity=0.114 Sum_probs=48.1
Q ss_pred hcccchhhhhhhhhhcCccc----ceeeeccccccceeEEEEEeeccceehhHHHHHHHHhccCcceeeecCCceEEEEe
Q 045110 274 IDGTLNKLSTLREYIDDTED----YINIQLDNHRNQLIQLELFLCSGTVCLSVYSLVAAIFGMNIPYTWKTGHGYVFKWV 349 (376)
Q Consensus 274 ~~~~~~~~~~l~~~i~~~~~----~~~~~l~~~~N~~m~~~l~Lti~t~i~~~~t~IaGifGMN~~~~pe~~~~~gf~~v 349 (376)
..++.+.+..+.+.++...+ +.+.+++...|++++ .+-++|.+-+++.-.+=+-|. | .|-...-|.. -|-
T Consensus 263 lrDv~d~~~~~~e~~~~~re~l~~l~d~~~s~is~~~N~---imk~LTiit~IflP~T~IaGi-y-GMNf~~mPel-~~~ 336 (363)
T 2iub_A 263 FRDVYDHTIQIADTVETFRDIVSGLLDVYLSSVSNKTNE---VMKVLTIIATIFMPLTFIAGI-Y-GMNFEYMPEL-RWK 336 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHTTS-C-C-------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHhh-h-cccCCCCCcc-cCc
Confidence 35566666666666665555 445555678888888 777777777777777777775 2 2322224532 244
Q ss_pred eeehhHHHHHHHHHHHHHhhhcc
Q 045110 350 VVITGIVCALLFSIIIFYARHKG 372 (376)
Q Consensus 350 ~~~~~~~~~~i~~~~~~~fkrk~ 372 (376)
.|. .+++++++++.++.+.+=|
T Consensus 337 ~Gy-~~~l~~m~~i~~~~~~~Fk 358 (363)
T 2iub_A 337 WGY-PVVLAVMGVIAVIMVVYFK 358 (363)
T ss_dssp --C-HHHHHHHHHHHHHHHTTTT
T ss_pred HHH-HHHHHHHHHHHHHHHHHHH
Confidence 443 2355555555555544433
No 11
>1txp_A HnRNP C, heterogeneous nuclear ribonucleoprotein C protein; antiparallel four helix coiled coil tetramer HNRNPC, signaling protein; NMR {Homo sapiens}
Probab=62.23 E-value=10 Score=22.49 Aligned_cols=25 Identities=20% Similarity=0.494 Sum_probs=21.8
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHhhc
Q 045110 177 RKLKSAMTRLTNRVQKVRDELEQLL 201 (376)
Q Consensus 177 ~~lK~~L~~l~~~v~~vre~l~~lL 201 (376)
..+|++|.+++..|..+-+-|+++-
T Consensus 2 Q~IkkELtQIK~kvDsLLe~Le~~~ 26 (28)
T 1txp_A 2 QAIKKELTQIKQKVDSLLENLEKIE 26 (28)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 5689999999999999999888764
No 12
>1nfn_A Apolipoprotein E3; lipid transport, heparin-binding, plasma protein, HDL, VLDL; 1.80A {Homo sapiens} SCOP: a.24.1.1 PDB: 1h7i_A 1ea8_A 1b68_A 1nfo_A 2kc3_A 1ya9_A
Probab=56.57 E-value=24 Score=30.79 Aligned_cols=60 Identities=25% Similarity=0.415 Sum_probs=36.8
Q ss_pred hhhhhhccccccccccchHHHhhhhcccchhHHH-hhHHHHHHHHHHHHHHHHHHHhhcCCC
Q 045110 144 SFLDARTRELETDAYPALDELTSKISSRNLDRVR-KLKSAMTRLTNRVQKVRDELEQLLDDD 204 (376)
Q Consensus 144 ~~l~~~~~~Le~~~~~~ld~L~~~~~~~~L~~l~-~lK~~L~~l~~~v~~vre~l~~lL~dd 204 (376)
+.+...++.+...+.|..+++..++.. ..+.++ .+++++..++.++.|.++.|...+...
T Consensus 69 ~~l~~~~~~l~~qL~P~~~e~~~~l~~-~~e~lr~~l~kdlEelr~kL~P~~eEL~~~l~~~ 129 (191)
T 1nfn_A 69 KELKAYKSELEEQLTPVAEETRARLSK-ELQAAQARLGADMEDVCGRLVQYRGEVQAMLGQS 129 (191)
T ss_dssp HHHHHHHHHHTTC----------CHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred HHHHHHHHHHHHhcchhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 445555667777888877777665553 445555 678899999999999999998887543
No 13
>1gs9_A Apolipoprotein E, APOE4; lipid transport, heparin-binding, plasma, lipid binding protein; 1.7A {Homo sapiens} SCOP: a.24.1.1 PDB: 1or3_A 1or2_A 1le4_A 1bz4_A 1lpe_A 1le2_A
Probab=54.29 E-value=31 Score=29.33 Aligned_cols=58 Identities=26% Similarity=0.438 Sum_probs=38.7
Q ss_pred hhhhhhccccccccccchHHHhhhhcccchhHHH-hhHHHHHHHHHHHHHHHHHHHhhcC
Q 045110 144 SFLDARTRELETDAYPALDELTSKISSRNLDRVR-KLKSAMTRLTNRVQKVRDELEQLLD 202 (376)
Q Consensus 144 ~~l~~~~~~Le~~~~~~ld~L~~~~~~~~L~~l~-~lK~~L~~l~~~v~~vre~l~~lL~ 202 (376)
+.+...++.+...+.|+-+++..++. ...+.++ .|...+..++.++.|.++.+...+.
T Consensus 69 d~l~~~~~~l~~~L~P~t~el~~~l~-~~~e~Lr~~L~~d~EelR~~l~p~~~el~~~l~ 127 (165)
T 1gs9_A 69 KELKAYKSELEEQLTPVAEETRARLS-KELQAAQARLGADMEDVRGRLVQYRGEVQAMLG 127 (165)
T ss_dssp HHHHHHHHHHTTSCCCCCSHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTT
T ss_pred HHHHHHHHHHHHhccchHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455566677777776666655544 2445555 5777788888888888888887664
No 14
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=50.13 E-value=8.3 Score=25.64 Aligned_cols=13 Identities=15% Similarity=0.140 Sum_probs=6.4
Q ss_pred HHHHHHHHhhhcc
Q 045110 360 LFSIIIFYARHKG 372 (376)
Q Consensus 360 i~~~~~~~fkrk~ 372 (376)
+.++.++|+|||+
T Consensus 27 i~~~~~~~~RRr~ 39 (44)
T 2ks1_B 27 VALGIGLFMRRRH 39 (44)
T ss_dssp HHHHHHHHHHTTT
T ss_pred HHHHHHHHhhhhH
Confidence 3344455555554
No 15
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=48.43 E-value=9.2 Score=25.42 Aligned_cols=13 Identities=23% Similarity=0.284 Sum_probs=6.6
Q ss_pred HHHHHHHHhhhcc
Q 045110 360 LFSIIIFYARHKG 372 (376)
Q Consensus 360 i~~~~~~~fkrk~ 372 (376)
+.++.++|+|||+
T Consensus 26 i~~~~~~~~RRRr 38 (44)
T 2l2t_A 26 VGLTFAVYVRRKS 38 (44)
T ss_dssp HHHHHHHHHHTTC
T ss_pred HHHHHHHHhhhhh
Confidence 3344455555554
No 16
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=38.05 E-value=16 Score=23.34 Aligned_cols=12 Identities=8% Similarity=0.290 Sum_probs=5.6
Q ss_pred HHHHHHHhhhcc
Q 045110 361 FSIIIFYARHKG 372 (376)
Q Consensus 361 ~~~~~~~fkrk~ 372 (376)
.+++.+||+|||
T Consensus 27 i~~l~~~~~rrr 38 (38)
T 2k1k_A 27 LLGILVFRSRRA 38 (38)
T ss_dssp HHHHHHHHHCCC
T ss_pred HHHHHHHHeecC
Confidence 344445555543
No 17
>3ck6_A Putative membrane transport protein; APC91421.1, ZNTB, cytoplasmic domain, PSI-2, protein structure initiative; HET: MSE; 1.90A {Vibrio parahaemolyticus rimd 2210633} PDB: 3bhc_A*
Probab=37.71 E-value=9.1 Score=34.36 Aligned_cols=15 Identities=7% Similarity=0.244 Sum_probs=7.8
Q ss_pred hhhhhhhhccccccc
Q 045110 142 ICSFLDARTRELETD 156 (376)
Q Consensus 142 v~~~l~~~~~~Le~~ 156 (376)
+++.++.+++++|+.
T Consensus 152 ~l~~l~~~id~lE~~ 166 (252)
T 3ck6_A 152 YLDTIEETLNEFDVN 166 (252)
T ss_dssp HHHHHHHHHHTCCTT
T ss_pred HHHHHHHHHHHHHcC
Confidence 344445555555554
No 18
>2l7b_A Apolipoprotein E, APO-E; lipid transport, atherosclerosis, alzheime disease; NMR {Homo sapiens}
Probab=37.23 E-value=72 Score=29.89 Aligned_cols=114 Identities=23% Similarity=0.348 Sum_probs=70.1
Q ss_pred hhhhhhhhccccccccccchHHHhhhhcccchhHHH-hhHHHHHHHHHHHHHHHHHHHhhcCCCcchhhhHHhhhhcccc
Q 045110 142 ICSFLDARTRELETDAYPALDELTSKISSRNLDRVR-KLKSAMTRLTNRVQKVRDELEQLLDDDDDMADLYLSRKLAVAS 220 (376)
Q Consensus 142 v~~~l~~~~~~Le~~~~~~ld~L~~~~~~~~L~~l~-~lK~~L~~l~~~v~~vre~l~~lL~dd~dm~~m~Lt~~~~~~~ 220 (376)
+.+.+...+..+...+.|+.+++...++. ..+.++ .+...+..++.++.|.++.+...+..+-+-..--|+......
T Consensus 75 ~~~el~~y~~~l~~qL~P~~~e~~~~l~~-~~~~Lr~~L~~dlEelR~~L~Py~~el~~~l~~~~eelr~kL~Py~~EL- 152 (307)
T 2l7b_A 75 TMKELKAYKSELEEQLTPVAEETRARLSK-ELQAAQARLGADMEDVCGRLVQYRGEVQAMLGQSTEELRVRLASHLRKL- 152 (307)
T ss_dssp HHHHHHHHHHHHTTCCCSCCSSTHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCSHHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHHhhcchHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 34455555566777777776666555543 344554 677899999999999999999999866543221122111000
Q ss_pred CCCCCCCCCcccccCCCcccccccccccccceeecCcCCHHHHHHHHHHHHhhh-cccchhhhhhhhhhc
Q 045110 221 SPVSGSGAPHWFLNSPTIGSKISRTISRGSMETTQEENDVEELEMLLEAYFMQI-DGTLNKLSTLREYID 289 (376)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eelE~LLE~y~~~~-~~~~~~~~~l~~~i~ 289 (376)
......+.+++-.-|.+|..++ ..+.+.++.+++.+.
T Consensus 153 --------------------------------~~~~~~~~eeLr~~L~py~eeLr~kl~~~veelr~~L~ 190 (307)
T 2l7b_A 153 --------------------------------RKRLLRDADDLQKRLAVYQAGAREGAERGLSAIRERLG 190 (307)
T ss_dssp --------------------------------HHHHHHHHHHHHHHHHHHTSCCSSHHHHHHHHHHHHCS
T ss_pred --------------------------------HHHHHhhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhh
Confidence 0001235567777788888876 356666777776664
No 19
>2k21_A Potassium voltage-gated channel subfamily E member; KCNE1, membrane protein, potassium channel, MINK, auxilliary subunit, micelles, ION transport; NMR {Homo sapiens}
Probab=32.96 E-value=7.5 Score=31.82 Aligned_cols=31 Identities=19% Similarity=0.329 Sum_probs=23.6
Q ss_pred CceEEEEeeeehhHHHHHHHHHHHHHhhhcc
Q 045110 342 HGYVFKWVVVITGIVCALLFSIIIFYARHKG 372 (376)
Q Consensus 342 ~~~gf~~v~~~~~~~~~~i~~~~~~~fkrk~ 372 (376)
..++|.+++.++.+.++.++.+|+.|.|-||
T Consensus 49 ~~~~ylYIL~vmgffgff~~GImLsYiRSKk 79 (138)
T 2k21_A 49 GKLEALYVLMVLGFFGFFTLGIMLSYIRSKK 79 (138)
T ss_dssp CSSTTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCceeehHHHHHHHHHHHHHHHHHHHhHhhh
Confidence 3455777777677777788889999999776
No 20
>3swf_A CGMP-gated cation channel alpha-1; coiled-coil, assembly domain, transport protein; 2.14A {Bos taurus}
Probab=31.75 E-value=33 Score=25.28 Aligned_cols=21 Identities=24% Similarity=0.362 Sum_probs=17.2
Q ss_pred HhhHHHHHHHHHHHHHHHHHH
Q 045110 177 RKLKSAMTRLTNRVQKVRDEL 197 (376)
Q Consensus 177 ~~lK~~L~~l~~~v~~vre~l 197 (376)
..||+++..|+..+.+.++.-
T Consensus 35 ~KLKqRit~LE~~~~~~~~~~ 55 (74)
T 3swf_A 35 QKLKQRLTKVEKFLKPLIDTE 55 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccCCCc
Confidence 479999999999999866544
No 21
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=27.81 E-value=36 Score=22.52 Aligned_cols=16 Identities=6% Similarity=0.063 Sum_probs=9.8
Q ss_pred HHHHHHHHHHhhhccC
Q 045110 358 ALLFSIIIFYARHKGL 373 (376)
Q Consensus 358 ~~i~~~~~~~fkrk~w 373 (376)
+++.++..+|+|||+-
T Consensus 25 vi~~l~~~~~~RRR~~ 40 (44)
T 2jwa_A 25 VVLGVVFGILIKRRQQ 40 (44)
T ss_dssp HHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHhheehhhh
Confidence 3444456777787764
No 22
>3r2p_A Apolipoprotein A-I; amphipathic alpha-helix, major protein of high density lipop (HDL), lipid binding, plasma, lipid transport; 2.20A {Homo sapiens} PDB: 1gw3_A 1gw4_A
Probab=27.40 E-value=52 Score=28.23 Aligned_cols=52 Identities=13% Similarity=0.288 Sum_probs=29.4
Q ss_pred ccccccccccchHHHhhhhcccchhHHH-hhHHHHHHHHHHHHHHHHHHHhhcC
Q 045110 150 TRELETDAYPALDELTSKISSRNLDRVR-KLKSAMTRLTNRVQKVRDELEQLLD 202 (376)
Q Consensus 150 ~~~Le~~~~~~ld~L~~~~~~~~L~~l~-~lK~~L~~l~~~v~~vre~l~~lL~ 202 (376)
+..+...+.+..+++..+++. ..+.++ .+.+.+..++.++.|..+.+...+.
T Consensus 58 ~~~l~~~l~p~~~e~~~~l~~-~~~~Lr~~l~kdlee~r~~l~P~~~e~~~~~~ 110 (185)
T 3r2p_A 58 FSKLREQLGPVTQEFWDNLEK-ETEGLRQEMSKDLEEVKAKVQPYLDDFQKKWQ 110 (185)
T ss_dssp HHHHHHHHCSCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcchHHHHHHHHHH-HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH
Confidence 344444444444444444433 234444 4666677777777777777776653
No 23
>3s84_A Apolipoprotein A-IV; four helix bundle, transport protein; 2.40A {Homo sapiens}
Probab=26.26 E-value=1.1e+02 Score=28.11 Aligned_cols=109 Identities=22% Similarity=0.335 Sum_probs=0.0
Q ss_pred chhHHHHHhhhcCCCCCccCCCCcccCCCCccCcchhhhhhhhhhhhccccccccccchHHHhhhhcccchhHHH-----
Q 045110 103 IPIVEQLQRRLASDYPISQGQGEEEDNHPGVRNNFETEAICSFLDARTRELETDAYPALDELTSKISSRNLDRVR----- 177 (376)
Q Consensus 103 ~~f~~~L~~rL~~~~~~~~~~~~~~~~~~~~~LpfELeav~~~l~~~~~~Le~~~~~~ld~L~~~~~~~~L~~l~----- 177 (376)
.+-+++++.+|.+. .+.+-..+...++++...+.|..++|...+.. +++.++
T Consensus 21 ~~~~eel~~~L~P~----------------------~~~l~~~l~~~le~lr~~L~Py~~el~~~~~~-~~eelr~kL~p 77 (273)
T 3s84_A 21 GKELEELRARLLPH----------------------ANEVSQKIGDNLRELQQRLEPYADQLRTQVNT-QAEQLRRQLTP 77 (273)
T ss_dssp HHHHHHHHHHHGGG----------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCc----------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHH
Q ss_pred -------hhHHHHHHHHHHHHHHHHHHHhhcCCCcchhhhHHhhhhccccCCCCCCCCCcccccCCCccccccccccccc
Q 045110 178 -------KLKSAMTRLTNRVQKVRDELEQLLDDDDDMADLYLSRKLAVASSPVSGSGAPHWFLNSPTIGSKISRTISRGS 250 (376)
Q Consensus 178 -------~lK~~L~~l~~~v~~vre~l~~lL~dd~dm~~m~Lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (376)
.++..+..++.++.|.-+.+..=+
T Consensus 78 ~~~el~~~l~~~~eeLr~~L~p~~eelr~kl------------------------------------------------- 108 (273)
T 3s84_A 78 YAQRMERVLRENADSLQASLRPHADELKAKI------------------------------------------------- 108 (273)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------------------------------------------
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH-------------------------------------------------
Q ss_pred ceeecCcCCHHHHHHHHHHHHhhh-cccchhhhhhhhhhc
Q 045110 251 METTQEENDVEELEMLLEAYFMQI-DGTLNKLSTLREYID 289 (376)
Q Consensus 251 ~~~~~~~~~~eelE~LLE~y~~~~-~~~~~~~~~l~~~i~ 289 (376)
..+.+++-..|.+|..++ ..+.+.++.+++.+.
T Consensus 109 ------~~~veelk~~L~Py~eelr~k~~~~leeLr~~l~ 142 (273)
T 3s84_A 109 ------DQNVEELKGRLTPYADEFKVKIDQTVEELRRSLA 142 (273)
T ss_dssp ------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHG
T ss_pred ------HhhHHHHHHHhHhHHHHHHHHHHHHHHHHHHHhh
No 24
>1z23_A CRK-associated substrate; four-helix bundle, cell adhesion; NMR {Rattus norvegicus}
Probab=23.11 E-value=24 Score=30.05 Aligned_cols=69 Identities=19% Similarity=0.211 Sum_probs=39.9
Q ss_pred cCcchhhhhhhhhhhhccccccccccchHHHhhhhcccchhHH-HhhHHHHHHHHHHHHHHHHHHHhhcC
Q 045110 134 RNNFETEAICSFLDARTRELETDAYPALDELTSKISSRNLDRV-RKLKSAMTRLTNRVQKVRDELEQLLD 202 (376)
Q Consensus 134 ~LpfELeav~~~l~~~~~~Le~~~~~~ld~L~~~~~~~~L~~l-~~lK~~L~~l~~~v~~vre~l~~lL~ 202 (376)
.+|-++|+.++.|..--.+++..+..++.-+.+--...+.... -.+-..+..++..+..++..+.++|+
T Consensus 4 e~~Ldld~A~E~L~rLQ~~v~~sVs~Ll~fv~s~~~~~~WR~~~~~le~~i~~i~~a~~~v~~Sl~efL~ 73 (163)
T 1z23_A 4 REPLELEVAVETLARLQQGVSTTVAHLLDLVGSASGPGGWRSTSEPQEPPVQDLKAAVAAVHGAVHELLE 73 (163)
T ss_dssp SCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCSSCCSSSSCCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcCccCcccccchhHHHHHHHHHHHHHHHHHHHH
Confidence 4566678777766655555555544333222110011223333 34567788888888888888888873
No 25
>4egw_A Magnesium transport protein CORA; magnesium transporter, magnesium binding, metal transp; 2.50A {Methanocaldococcus jannaschii}
Probab=22.98 E-value=13 Score=34.00 Aligned_cols=35 Identities=11% Similarity=0.083 Sum_probs=15.1
Q ss_pred ccchhhhhhhhhhcC----cccceeeeccccccceeEEE
Q 045110 276 GTLNKLSTLREYIDD----TEDYINIQLDNHRNQLIQLE 310 (376)
Q Consensus 276 ~~~~~~~~l~~~i~~----~~~~~~~~l~~~~N~~m~~~ 310 (376)
++...+..+.+.++. +..+.+.+++...|+++.++
T Consensus 241 Dv~dh~~~~~e~~~~~re~l~~l~d~~~s~is~~~N~iM 279 (280)
T 4egw_A 241 DLYYDTLQLIDMSATYREVLTSMMDITLSLENIKMNQIM 279 (280)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 444444444444444 44455666677888887753
No 26
>4ev6_A Magnesium transport protein CORA; membrane protein, ION transporter, metal TR; HET: UMQ; 3.20A {Methanocaldococcus jannaschii}
Probab=21.75 E-value=3.4 Score=39.28 Aligned_cols=99 Identities=15% Similarity=0.078 Sum_probs=56.5
Q ss_pred HHHHHhhh-cccchhhhhhhhhhcCcccceeeeccccccceeEEEEEeeccceehhHHHHHHHHhccCcceeeecCCceE
Q 045110 267 LEAYFMQI-DGTLNKLSTLREYIDDTEDYINIQLDNHRNQLIQLELFLCSGTVCLSVYSLVAAIFGMNIPYTWKTGHGYV 345 (376)
Q Consensus 267 LE~y~~~~-~~~~~~~~~l~~~i~~~~~~~~~~l~~~~N~~m~~~l~Lti~t~i~~~~t~IaGifGMN~~~~pe~~~~~g 345 (376)
...|++++ +++.+..+.+..+.+.+..+.+..++...|+.++ .+-++|.+-+++.-.+=+-|. -.|-...-|..
T Consensus 235 ~~~~l~dv~~~~~~l~e~~~~~~e~l~~l~d~~~s~is~~~N~---~mk~LTiit~IflP~T~IaGi--yGMNf~~mPel 309 (339)
T 4ev6_A 235 DRENFEDLYYDTLQLIDMSATYREVLTSMMDITLSLENIKMNQ---IMKILTMVTTIFAVPMWITGI--YGMNFSYLPLA 309 (339)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHSSHHHHHHHH--TTCCCSCCTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHhh--ccCcCCCCCCc
Confidence 45677776 5677777777777777777888888888888887 655555555555555555553 12222223432
Q ss_pred EEEeeeehhHHHHHHHHHHHHHhhhcc
Q 045110 346 FKWVVVITGIVCALLFSIIIFYARHKG 372 (376)
Q Consensus 346 f~~v~~~~~~~~~~i~~~~~~~fkrk~ 372 (376)
- |-.+. .+++++++++.++.+.+=|
T Consensus 310 ~-~~~gy-~~~l~~m~~~~~~~~~~fk 334 (339)
T 4ev6_A 310 N-NPQGF-WLVMALMVVIIMIFVYIFR 334 (339)
T ss_dssp S-CTTHH-HHHHHHHHHHHHHHHHHHH
T ss_pred c-CchHH-HHHHHHHHHHHHHHHHHHH
Confidence 1 33332 2345555555555554433
Done!