BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045115
(131 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P80728|MAVI_CUCPE Mavicyanin OS=Cucurbita pepo PE=1 SV=1
Length = 108
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 46/68 (67%), Gaps = 4/68 (5%)
Query: 1 MHDVHEVTEADYVACNAKASIKHHISGSDAITLNAPGIYYFICGIPGHCQAGQRLRIEVE 60
H+V +V + + +CN+ + + SG+D+I L PG +YF+CGIPGHCQ GQ++ I+V+
Sbjct: 43 FHNVLQVDQEQFKSCNSSSPAASYTSGADSIPLKRPGTFYFLCGIPGHCQLGQKVEIKVD 102
Query: 61 SDGSPGAS 68
PG+S
Sbjct: 103 ----PGSS 106
>sp|Q9T076|ENL2_ARATH Early nodulin-like protein 2 OS=Arabidopsis thaliana GN=At4g27520
PE=1 SV=1
Length = 349
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 60/126 (47%), Gaps = 22/126 (17%)
Query: 4 VHEVTEADYVACNAKASIKHHISGSDAITLNAPGIYYFICGIPGHCQAGQRLRIEVESDG 63
V EV +ADY ACN K IK G I+L+ G +YFI G +C+ GQ+L + V S
Sbjct: 73 VLEVNKADYDACNTKNPIKRVDDGDSEISLDRYGPFYFISGNEDNCKKGQKLNVVVISAR 132
Query: 64 SPGASPS---AAPGQSPTTSSTSSGGS----------------ASTVPPGGGSGSTPPSS 104
P + S AAPG S S T GG+ ST PPGG P S
Sbjct: 133 IPSTAQSPHAAAPGSSTPGSMTPPGGAHSPKSSSPVSPTTSPPGSTTPPGGAHS---PKS 189
Query: 105 SSALLP 110
SSA+ P
Sbjct: 190 SSAVSP 195
>sp|Q07488|BCB1_ARATH Blue copper protein OS=Arabidopsis thaliana GN=BCB PE=1 SV=2
Length = 196
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 59/111 (53%), Gaps = 5/111 (4%)
Query: 2 HDVHEVTEADYVACNAKASIKHHISGSDAITLNAPGIYYFICGIPGHCQAGQRLRIEVES 61
HDV V+EA + C + I H I LN G YFIC + HC+ GQ+L I V +
Sbjct: 66 HDVAVVSEAAFENCEKEKPISHMTVPPVKIMLNTTGPQYFICTVGDHCRFGQKLSITVVA 125
Query: 62 DG-----SPGASPSAAPGQSPTTSSTSSGGSASTVPPGGGSGSTPPSSSSA 107
G +PGA + APG +P+T T+ + T P G SG+T P+ ++A
Sbjct: 126 AGATGGATPGAGATPAPGSTPSTGGTTPPTAGGTTTPSGSSGTTTPAGNAA 176
>sp|P00302|STEL_TOXVR Stellacyanin OS=Toxicodendron vernicifluum PE=1 SV=1
Length = 107
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%)
Query: 1 MHDVHEVTEADYVACNAKASIKHHISGSDAITLNAPGIYYFICGIPGHCQAGQRLRIEV 59
H+V +VT+ +Y +CN I + +G B I L G Y+ICG+P HC GQ++ I V
Sbjct: 45 FHNVDKVTQKNYQSCNDTTPIASYNTGBBRINLKTVGQKYYICGVPKHCDLGQKVHINV 103
>sp|Q41001|BCP_PEA Blue copper protein OS=Pisum sativum PE=2 SV=1
Length = 189
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 2 HDVHEVTEADYVACNAKASIKHHISGSDAITLNAPGIYYFICGIPGHCQAGQRLRIEVE 60
H V EV E+DY +C + SI +G+ I L G +YFICG+PGH G +L I+V+
Sbjct: 65 HTVDEVKESDYKSCTSGNSISTDSTGATTIPLKKAGKHYFICGVPGHSTGGMKLSIKVK 123
>sp|P93328|NO16_MEDTR Early nodulin-16 OS=Medicago truncatula GN=ENOD16 PE=3 SV=1
Length = 180
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%)
Query: 4 VHEVTEADYVACNAKASIKHHISGSDAITLNAPGIYYFICGIPGHCQAGQRLRIEVES 61
VHEV E DY+ C+ H G+ + L+ G+Y+FI G HC+ G +L + V++
Sbjct: 72 VHEVNEHDYIMCHTNGEHVEHHDGNTKVVLDKIGVYHFISGTKRHCKMGLKLAVVVQN 129
>sp|O80517|BCB2_ARATH Uclacyanin-2 OS=Arabidopsis thaliana GN=At2g44790 PE=1 SV=1
Length = 202
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 2 HDVHEVTEADYVACNAKASIKHHISGSDAITLNAPGIYYFICGIPGHCQA--GQRLRIEV 59
H V V +A Y C+A +S ++H G I L GI YFIC PGHC+ G +L + V
Sbjct: 65 HTVDVVDKAGYDGCDASSSTENHSDGDTKIDLKTVGINYFICSTPGHCRTNGGMKLAVNV 124
>sp|P00303|BABL_CUCSA Basic blue protein OS=Cucumis sativus PE=1 SV=1
Length = 96
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 1 MHDVHEVTEADYVACNAKASIKHHISGSDAITLNAPGIYYFICGIPGHCQAGQRLRIE 58
MH+V V + + CN A K + SG D I L G YFIC PGHCQ+G ++ +
Sbjct: 38 MHNVVVVNQGGFSTCNTPAGAKVYTSGRDQIKL-PKGQSYFICNFPGHCQSGMKIAVN 94
>sp|Q9SK27|ENL1_ARATH Early nodulin-like protein 1 OS=Arabidopsis thaliana GN=At2g25060
PE=1 SV=2
Length = 182
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%)
Query: 4 VHEVTEADYVACNAKASIKHHISGSDAITLNAPGIYYFICGIPGHCQAGQRLRIEVESDG 63
V EVT+ Y +CN + ++ G + L+ G +YFI G GHC+ GQ+L + V S
Sbjct: 76 VLEVTKEAYNSCNTTNPLANYTDGETKVKLDRSGPFYFISGANGHCEKGQKLSLVVISPR 135
Query: 64 SPGASPSAAP 73
SP+ +P
Sbjct: 136 HSVISPAPSP 145
>sp|Q05544|NO551_SOYBN Early nodulin-55-1 (Fragment) OS=Glycine max GN=ENOD55-1 PE=2
SV=1
Length = 137
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
Query: 4 VHEVTEADYVACNAKASIKHHI---SGSDAITLNAPGIYYFICGIPGHCQAGQRLRIEVE 60
VHEV E DY CN K H+ G+ + L G +FI G HCQ G +L + V
Sbjct: 9 VHEVNETDYEQCNTVG--KEHVLFNDGNTKVMLTKSGFRHFISGNQSHCQMGLKLMVVVM 66
Query: 61 SDGSP 65
S+ +
Sbjct: 67 SNNTK 71
>sp|P60496|BABL_LILLO Chemocyanin OS=Lilium longiflorum PE=1 SV=1
Length = 126
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 1 MHDVHEVTEADYVACNAKASIKHHISGSDAITLNAPGIYYFICGIPGHCQAGQRLRI 57
+H+V V Y +C A + SG D ITL + G YFIC +PGHCQ G ++ +
Sbjct: 68 VHNVVSVPAGGYKSCTASPGSRVFKSGDDRITL-SRGTNYFICSVPGHCQGGLKIAV 123
>sp|P42849|UMEC_ARMRU Umecyanin OS=Armoracia rusticana PE=1 SV=1
Length = 115
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%)
Query: 1 MHDVHEVTEADYVACNAKASIKHHISGSDAITLNAPGIYYFICGIPGHCQAGQRLRIEV 59
MHDV VT+ + C + I H + I LN G Y+IC + HC+ GQ+L I V
Sbjct: 43 MHDVAVVTKDAFDNCKKENPISHMTTPPVKIMLNTTGPQYYICTVGDHCRVGQKLSINV 101
>sp|P93329|NO20_MEDTR Early nodulin-20 OS=Medicago truncatula GN=ENOD20 PE=3 SV=1
Length = 268
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 29/56 (51%)
Query: 4 VHEVTEADYVACNAKASIKHHISGSDAITLNAPGIYYFICGIPGHCQAGQRLRIEV 59
VHEV E DY C + H G+ + L GI++FI G HC+ G +L + V
Sbjct: 72 VHEVEEEDYDRCGIRGEHVDHYDGNTMVVLKKTGIHHFISGKKRHCRLGLKLAVVV 127
>sp|Q39131|LAML_ARATH Lamin-like protein OS=Arabidopsis thaliana GN=At5g15350 PE=1 SV=1
Length = 172
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 2 HDVHEVTEADYVACNAKASIKHHI--SGSDAITLNAPGIYYFICGIPGHCQAGQRLRIEV 59
H++ EV + DY C A I++ +G D +TLN YY + G G C G +L ++V
Sbjct: 67 HNILEVNKTDYEGCIADHPIRNWTRGAGRDIVTLNQTKHYYLLDG-KGGCYGGMKLSVKV 125
Query: 60 ESDGSPGASPSAAPGQSPTTSSTSSGGSASTVP 92
E P P +AP ++ + S +G + +P
Sbjct: 126 EKLPPP---PKSAPVKNIGSVSMVTGLAQFMIP 155
>sp|Q02917|NO552_SOYBN Early nodulin-55-2 OS=Glycine max GN=ENOD55-2 PE=2 SV=1
Length = 187
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 31/61 (50%), Gaps = 5/61 (8%)
Query: 4 VHEVTEADYVACNAKASIKHHI---SGSDAITLNAPGIYYFICGIPGHCQAGQRLRIEVE 60
VHE E DY CN K+HI G+ + L PG +FI G HCQ G +L + V
Sbjct: 74 VHEGNETDYEGCNTVG--KYHIVFNGGNTKVMLTKPGFRHFISGNQSHCQMGLKLAVLVI 131
Query: 61 S 61
S
Sbjct: 132 S 132
>sp|Q8LG89|BABL_ARATH Basic blue protein OS=Arabidopsis thaliana GN=ARPN PE=1 SV=2
Length = 129
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 1 MHDVHEVTEADYVACNAKASIKHHISGSDAITLNAPGIYYFICGIPGHCQAGQRLRI 57
MH+V +V Y C K + SG D ITL + G +FIC P HC++ ++ +
Sbjct: 71 MHNVVKVDSGSYNNCKTPTGAKPYTSGKDRITL-SKGQNFFICNFPNHCESDMKIAV 126
>sp|B4HEM4|PDE6_DROSE cGMP-specific 3',5'-cyclic phosphodiesterase OS=Drosophila
sechellia GN=Pde6 PE=3 SV=1
Length = 1205
Score = 42.7 bits (99), Expect = 6e-04, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 6/57 (10%)
Query: 57 IEVESDGSPGASPSAAP------GQSPTTSSTSSGGSASTVPPGGGSGSTPPSSSSA 107
+E+ + SP A+ SA+ G + TT ST++GG A PG GSG+ P SSSS
Sbjct: 15 VEMTTSSSPAATTSASSSKPLTNGANKTTISTTAGGVAPGDVPGTGSGAIPASSSSG 71
>sp|P29602|CPC_CUCSA Cucumber peeling cupredoxin OS=Cucumis sativus PE=1 SV=3
Length = 137
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 2 HDVHEV-TEADYVACNAKASIKHHISGSDAI-TLNAPGIYYFICGIPGHCQAGQRLRIEV 59
H+VHE+ T+ + ACN S S I L+ G++YF+C + HC GQ+L I V
Sbjct: 46 HNVHEMETKQSFDACNFVNSDNDVERTSPVIERLDELGMHYFVCTVGTHCSNGQKLSINV 105
>sp|Q8LC95|ENL3_ARATH Early nodulin-like protein 3 OS=Arabidopsis thaliana GN=At5g25090
PE=1 SV=2
Length = 186
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 41/97 (42%)
Query: 4 VHEVTEADYVACNAKASIKHHISGSDAITLNAPGIYYFICGIPGHCQAGQRLRIEVESDG 63
V +VT+ Y+ CN ++ +G + L G Y+FI G +C G++L I V S
Sbjct: 71 VLQVTKDAYINCNTTNPAANYSNGDTKVKLERSGPYFFISGSKSNCVEGEKLHIVVMSSR 130
Query: 64 SPGASPSAAPGQSPTTSSTSSGGSASTVPPGGGSGST 100
S + G+ + P GGS S+
Sbjct: 131 GGHTGGFFTGSSPSPAPSPALLGAPTVAPASGGSASS 167
>sp|Q5JNJ5|ENL1_ORYSJ Early nodulin-like protein 1 OS=Oryza sativa subsp. japonica
GN=ENODL1 PE=1 SV=1
Length = 237
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 11/95 (11%)
Query: 1 MHD------VHEVTEADYVAC---NAKASIKHHISGSDAITLNAPGIYYFICGIPGHCQA 51
+HD V +VTE D+ C N ++ +G + G ++FI G CQ
Sbjct: 65 LHDDEVGGSVLQVTEGDFDTCSTGNPVQRLEDVAAGRSVFRFDRSGPFFFISGDEDRCQK 124
Query: 52 GQRLRIEVESDG--SPGASPSAAPGQSPTTSSTSS 84
GQ+L I V + P +P A P +S + S
Sbjct: 125 GQKLYIIVMAVRPTKPSEAPEPAGAAGPVSSKSWS 159
>sp|B4QZU1|PDE6_DROSI cGMP-specific 3',5'-cyclic phosphodiesterase OS=Drosophila simulans
GN=Pde6 PE=3 SV=1
Length = 1143
Score = 36.2 bits (82), Expect = 0.054, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 21/34 (61%)
Query: 74 GQSPTTSSTSSGGSASTVPPGGGSGSTPPSSSSA 107
G + TT ST +GG A PG GSG+ P SSSS
Sbjct: 51 GANKTTISTVAGGVAPGAVPGPGSGAIPASSSSG 84
>sp|A6N9I4|GRP2_BOVIN RAS guanyl-releasing protein 2 OS=Bos taurus GN=RASGRP2 PE=2 SV=1
Length = 608
Score = 35.4 bits (80), Expect = 0.091, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 42/103 (40%), Gaps = 12/103 (11%)
Query: 1 MHDVHEVTEADYVAC-NAKASIKHHISGSDAITLNAPGIYYFICGIPGHCQAGQRLRIEV 59
+H+ HE VAC + KA I + + G+ CG+ H Q RL +E
Sbjct: 498 VHNFHESNSLRPVACRHCKALI---------LGIYKQGLKCRACGVNCHKQCKDRLSVEC 548
Query: 60 ESDGSPGASPSAAPGQSPTTSSTSSGGSASTVPPGGGSGSTPP 102
+ +AP SPT T + ++P G GS PP
Sbjct: 549 RRRAQSMSLEGSAPSPSPT--HTHHRAFSFSLPRPGRRGSRPP 589
>sp|Q3UHZ5|LMOD2_MOUSE Leiomodin-2 OS=Mus musculus GN=Lmod2 PE=1 SV=1
Length = 550
Score = 35.4 bits (80), Expect = 0.094, Method: Composition-based stats.
Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 47 GHCQAGQRLRIEVESDGSPGASPSAAPGQSPTTSSTSS 84
GH G LR +V G+PG+SP A+P QSP +S S
Sbjct: 375 GH-DGGAALRTKVWQRGTPGSSPYASPRQSPWSSPKVS 411
>sp|A1A5Q0|LMOD2_RAT Leiomodin-2 OS=Rattus norvegicus GN=Lmod2 PE=2 SV=1
Length = 549
Score = 35.4 bits (80), Expect = 0.10, Method: Composition-based stats.
Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 47 GHCQAGQRLRIEVESDGSPGASPSAAPGQSPTTSSTSS 84
GH G LR +V G+PG+SP A+P QSP +S S
Sbjct: 374 GH-DGGATLRTKVWQRGTPGSSPYASPRQSPWSSPKVS 410
>sp|Q9VFI9|PDE6_DROME cGMP-specific 3',5'-cyclic phosphodiesterase OS=Drosophila
melanogaster GN=Pde6 PE=1 SV=4
Length = 1118
Score = 34.3 bits (77), Expect = 0.26, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 20/34 (58%)
Query: 74 GQSPTTSSTSSGGSASTVPPGGGSGSTPPSSSSA 107
G + T ST++GG PG GSG+ P SSSS
Sbjct: 39 GANKTAISTAAGGVTPGAVPGPGSGAIPASSSSG 72
>sp|P06399|FIBA_RAT Fibrinogen alpha chain OS=Rattus norvegicus GN=Fga PE=1 SV=3
Length = 782
Score = 33.1 bits (74), Expect = 0.56, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Query: 53 QRLRIEVESDGSPGASPSAAPGQSPTTSSTSSGGSASTVP--PG-GGSGSTPP 102
+++R+E+E G GAS PG S S+T GS P PG GGSG P
Sbjct: 256 RQMRMELERPGKDGASRGDLPGDSRGDSATRGPGSKIENPMTPGHGGSGYWRP 308
>sp|P41002|CCNF_HUMAN Cyclin-F OS=Homo sapiens GN=CCNF PE=1 SV=2
Length = 786
Score = 32.7 bits (73), Expect = 0.61, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Query: 50 QAGQRLRIEVESDGSPGASP----SAAPGQSPTTSSTSSGGSAS-TVPPGGGSGSTPPSS 104
Q Q L ++ + +PG P S PG+ TTS SS +AS T GG G+ P +
Sbjct: 666 QDPQALALDTQIPATPGPKPLVRTSREPGKDVTTSGYSSVSTASPTSSVDGGLGALPQPT 725
Query: 105 SSALLPYSLHT 115
S L HT
Sbjct: 726 SVLSLDSDSHT 736
>sp|Q9TY95|SERA_PLAF7 Serine-repeat antigen protein OS=Plasmodium falciparum (isolate
3D7) GN=SERA PE=1 SV=1
Length = 997
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 8/48 (16%)
Query: 63 GSPGASPSAAPGQSPTTSSTSSGGSASTVPPGGGSGSTPPSSSSALLP 110
GS G SP + G SP S+ +S P G +G++ P SS P
Sbjct: 45 GSTGGSPQGSTGASPQGSTGAS--------PQGSTGASQPGSSEPSNP 84
>sp|A5E2Y4|PAN3_LODEL PAB-dependent poly(A)-specific ribonuclease subunit PAN3
OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS
2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) GN=PAN3 PE=3
SV=1
Length = 794
Score = 30.4 bits (67), Expect = 2.9, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 68 SPSAAPGQSPTTSSTSSGGSASTVPPGGGSGSTPPSSSSALLPYSLHTFLAAPGMLAV 125
+PS+ +P ++ + SA +P GGG + PPS+S L Y L+ A P LAV
Sbjct: 287 TPSSIMSSAPMSAGFYT--SALPIPQGGGMRNQPPSASMYPLQYHLYA-PAPPPRLAV 341
>sp|Q7KTX8|MED13_DROME Mediator of RNA polymerase II transcription subunit 13 OS=Drosophila
melanogaster GN=skd PE=1 SV=1
Length = 2618
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 49/107 (45%), Gaps = 7/107 (6%)
Query: 5 HEVTEADYVACNAKASIKHHISGSDA-ITLNAPGIYY--FICGIPGHCQAGQRLRIEVES 61
H + CNA +I G+D+ + + PG+ + F G G AGQR+ S
Sbjct: 1446 HNFDSSSVCVCNADTQKIGNIRGADSGVYVPLPGVSFNPFPSGA-GGALAGQRMLNGPSS 1504
Query: 62 DGSPGASPSAAPGQSPTTSSTSSGGSASTVPPGGGSGS---TPPSSS 105
G G +A G SP ++S GS P GGS S TPPSS+
Sbjct: 1505 AGFGGMRMISAFGGSPASASMPGAGSGHGHGPNGGSNSSSCTPPSSN 1551
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.128 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,275,090
Number of Sequences: 539616
Number of extensions: 2342001
Number of successful extensions: 25972
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 417
Number of HSP's successfully gapped in prelim test: 574
Number of HSP's that attempted gapping in prelim test: 21243
Number of HSP's gapped (non-prelim): 4704
length of query: 131
length of database: 191,569,459
effective HSP length: 97
effective length of query: 34
effective length of database: 139,226,707
effective search space: 4733708038
effective search space used: 4733708038
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 55 (25.8 bits)