Query 045118
Match_columns 221
No_of_seqs 113 out of 1216
Neff 9.8
Searched_HMMs 13730
Date Mon Mar 25 17:35:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045118.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/045118hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1p9ag_ c.10.2.7 (G:) von Will 99.6 3.8E-15 2.8E-19 115.8 13.5 111 72-187 95-206 (266)
2 d2omxa2 c.10.2.1 (A:37-235) In 99.6 5.1E-15 3.7E-19 110.3 12.8 142 19-180 57-198 (199)
3 d1h6ta2 c.10.2.1 (A:31-240) In 99.6 3.1E-15 2.2E-19 112.5 11.2 149 16-184 60-208 (210)
4 d1ogqa_ c.10.2.8 (A:) Polygala 99.5 3.8E-14 2.8E-18 112.4 12.1 167 16-187 68-279 (313)
5 d1h6ua2 c.10.2.1 (A:36-262) In 99.5 1.1E-13 8.1E-18 104.8 12.2 165 3-187 42-206 (227)
6 d1p9ag_ c.10.2.7 (G:) von Will 99.5 1.7E-13 1.3E-17 106.3 10.5 153 3-163 32-206 (266)
7 d1ozna_ c.10.2.7 (A:) Reticulo 99.4 9.9E-13 7.2E-17 102.7 13.1 175 3-187 33-236 (284)
8 d1h6ta2 c.10.2.1 (A:31-240) In 99.4 1.1E-12 8.1E-17 98.2 12.2 143 1-161 67-209 (210)
9 d1xkua_ c.10.2.7 (A:) Decorin 99.4 1.2E-12 8.6E-17 103.2 12.8 176 2-187 31-253 (305)
10 d2omza2 c.10.2.1 (A:33-416) In 99.4 1.6E-12 1.1E-16 105.1 13.1 149 19-187 214-362 (384)
11 d1ozna_ c.10.2.7 (A:) Reticulo 99.4 2.7E-12 2E-16 100.2 13.7 156 24-187 32-212 (284)
12 d1ogqa_ c.10.2.8 (A:) Polygala 99.4 2.4E-12 1.8E-16 101.8 12.5 109 24-139 50-160 (313)
13 d2astb2 c.10.1.3 (B:2136-2419) 99.4 3.3E-13 2.4E-17 105.8 6.8 163 17-186 64-235 (284)
14 d1a9na_ c.10.2.4 (A:) Spliceso 99.4 9.4E-14 6.8E-18 100.0 3.2 104 78-187 41-150 (162)
15 d2omxa2 c.10.2.1 (A:37-235) In 99.4 3.4E-12 2.5E-16 94.6 11.6 139 1-157 61-199 (199)
16 d1xkua_ c.10.2.7 (A:) Decorin 99.3 1.2E-11 8.5E-16 97.3 12.8 107 77-187 170-283 (305)
17 d2omza2 c.10.2.1 (A:33-416) In 99.3 2.2E-11 1.6E-15 98.2 13.8 148 18-185 235-382 (384)
18 d2astb2 c.10.1.3 (B:2136-2419) 99.3 1.4E-12 1E-16 102.1 5.6 175 2-179 71-252 (284)
19 d1h6ua2 c.10.2.1 (A:36-262) In 99.2 4.7E-11 3.5E-15 90.0 12.0 164 1-184 62-225 (227)
20 d1dcea3 c.10.2.2 (A:444-567) R 99.2 8.6E-12 6.3E-16 85.5 5.9 86 20-114 16-102 (124)
21 d1a9na_ c.10.2.4 (A:) Spliceso 99.2 6.6E-12 4.8E-16 90.1 5.4 108 22-139 16-123 (162)
22 d1dcea3 c.10.2.2 (A:444-567) R 99.2 5E-11 3.6E-15 81.6 7.9 86 70-162 13-100 (124)
23 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.1 1.3E-10 9.4E-15 85.4 9.6 86 72-162 49-136 (192)
24 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.1 6.8E-10 5E-14 84.0 13.8 112 72-187 98-212 (242)
25 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.1 9E-11 6.5E-15 86.3 7.8 106 78-187 29-137 (192)
26 d1m9la_ c.10.3.1 (A:) Outer ar 99.1 5.9E-13 4.3E-17 98.9 -4.6 147 25-184 24-182 (198)
27 d1m9la_ c.10.3.1 (A:) Outer ar 99.0 6.4E-12 4.7E-16 93.1 -3.4 129 16-158 40-180 (198)
28 d1xwdc1 c.10.2.7 (C:18-259) Fo 98.9 3.6E-09 2.6E-13 79.9 10.5 177 3-185 30-234 (242)
29 d2ifga3 c.10.2.7 (A:36-191) Hi 98.8 8.7E-09 6.3E-13 72.9 7.4 103 26-139 10-114 (156)
30 d2ifga3 c.10.2.7 (A:36-191) Hi 98.7 4.1E-08 3E-12 69.3 9.1 105 78-187 8-114 (156)
31 d1jl5a_ c.10.2.6 (A:) Leucine 98.5 6.8E-07 5E-11 70.1 11.3 53 127-187 283-335 (353)
32 d1jl5a_ c.10.2.6 (A:) Leucine 98.3 7.3E-06 5.3E-10 64.0 13.3 77 23-115 57-133 (353)
33 d2ca6a1 c.10.1.2 (A:2-345) Rna 98.3 1.6E-07 1.2E-11 74.3 3.3 42 18-59 87-130 (344)
34 d2ca6a1 c.10.1.2 (A:2-345) Rna 98.2 1.8E-07 1.3E-11 74.0 2.3 41 19-59 54-102 (344)
35 d1z7xw1 c.10.1.1 (W:1-460) Rib 97.6 8.2E-06 6E-10 65.8 2.1 113 3-116 3-126 (460)
36 d1koha1 c.10.2.3 (A:201-362) m 97.5 9.5E-07 6.9E-11 62.4 -4.7 81 74-158 62-152 (162)
37 d1z7xw1 c.10.1.1 (W:1-460) Rib 97.5 2.5E-05 1.8E-09 62.9 3.2 15 20-34 51-65 (460)
38 d1koha1 c.10.2.3 (A:201-362) m 97.2 1.8E-05 1.3E-09 55.6 -0.6 82 99-182 62-152 (162)
39 d1pgva_ c.10.1.1 (A:) Tropomod 96.8 0.00017 1.2E-08 50.7 1.1 11 151-161 130-140 (167)
40 d1pgva_ c.10.1.1 (A:) Tropomod 96.1 0.0047 3.4E-07 42.9 5.4 116 21-138 12-141 (167)
41 d1io0a_ c.10.1.1 (A:) Tropomod 95.7 0.00092 6.7E-08 46.5 0.3 69 45-114 12-86 (166)
42 d1io0a_ c.10.1.1 (A:) Tropomod 94.7 0.0039 2.8E-07 43.1 1.0 90 20-110 13-110 (166)
No 1
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.62 E-value=3.8e-15 Score=115.84 Aligned_cols=111 Identities=26% Similarity=0.270 Sum_probs=76.8
Q ss_pred ccCcCCCCccEEEeecccCCCCCchhhccCCCCcEEEecCCccCCceeeeeCCCCCCcccEEeccccccccceeeC-CCC
Q 045118 72 SEYKFPPSLTQLSLSNTELMEDPMPTLEKLPHLEVLKLKQNSYLERKLACVGCSSFSQLKILHLKSMLWLEEWTMG-AGA 150 (221)
Q Consensus 72 ~l~~~~~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~l~~~~~~~~~~L~~L~L~~~~~l~~~~~~-~~~ 150 (221)
.+..+ ++|+.|+++++.+.......+..+.++++|.+++|.+.. ++......++.++.++++++. ++.++.. ++.
T Consensus 95 ~~~~l-~~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l~~n~l~~--l~~~~~~~l~~l~~l~l~~N~-l~~~~~~~~~~ 170 (266)
T d1p9ag_ 95 LGQTL-PALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKT--LPPGLLTPTPKLEKLSLANNN-LTELPAGLLNG 170 (266)
T ss_dssp CTTTC-TTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCC--CCTTTTTTCTTCCEEECTTSC-CSCCCTTTTTT
T ss_pred ccccc-cccccccccccccceeeccccccccccccccccccccce--eccccccccccchhccccccc-ccccCcccccc
Confidence 34444 555566665555554444445555666666665555433 221113457889999999887 7777543 677
Q ss_pred CCCccEEEecCCccccCcchhhccCCcCcEEEccCCC
Q 045118 151 MPKLESLILNPCAYLRKLPEELWCIKSLCKLELHWPQ 187 (221)
Q Consensus 151 l~~L~~L~l~~~~~l~~~~~~~~~l~~L~~l~l~~~~ 187 (221)
+++|++|++++ +.++.+|.++..+++|+.|++.++|
T Consensus 171 l~~L~~L~Ls~-N~L~~lp~~~~~~~~L~~L~L~~Np 206 (266)
T d1p9ag_ 171 LENLDTLLLQE-NSLYTIPKGFFGSHLLPFAFLHGNP 206 (266)
T ss_dssp CTTCCEEECCS-SCCCCCCTTTTTTCCCSEEECCSCC
T ss_pred ccccceeeccc-CCCcccChhHCCCCCCCEEEecCCC
Confidence 99999999998 5688999999999999999999875
No 2
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.60 E-value=5.1e-15 Score=110.26 Aligned_cols=142 Identities=20% Similarity=0.274 Sum_probs=63.4
Q ss_pred hcCCCCCccEEEEEecCCccccchhHhhccCCCCcEEEeeecCceeeehhhccccCcCCCCccEEEeecccCCCCCchhh
Q 045118 19 ILGRLPNVRTFRISGDLSYYHSGVSKSLCKLHKLECLKLVNKGKMWQLSRMILSEYKFPPSLTQLSLSNTELMEDPMPTL 98 (221)
Q Consensus 19 ~l~~l~~Lr~L~l~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~L~~Llp~l~~~~~~L~~L~l~~~~~~~~~~~~l 98 (221)
.++.+++|++|+++++. . ..+++ ++++++|++|+++++. +.. ++.+..+ ++|+.|++++|..... ..+
T Consensus 57 ~l~~l~nL~~L~Ls~N~--l-~~~~~-l~~l~~L~~L~l~~n~----~~~-~~~l~~l-~~L~~L~l~~~~~~~~--~~~ 124 (199)
T d2omxa2 57 GVEYLNNLTQINFSNNQ--L-TDITP-LKNLTKLVDILMNNNQ----IAD-ITPLANL-TNLTGLTLFNNQITDI--DPL 124 (199)
T ss_dssp TGGGCTTCCEEECCSSC--C-CCCGG-GTTCTTCCEEECCSSC----CCC-CGGGTTC-TTCSEEECCSSCCCCC--GGG
T ss_pred ccccCCCcCcCcccccc--c-cCccc-ccCCcccccccccccc----ccc-ccccccc-cccccccccccccccc--ccc
Confidence 34445555555555553 1 22221 4555555555554421 011 3344444 5555555555544332 234
Q ss_pred ccCCCCcEEEecCCccCCceeeeeCCCCCCcccEEeccccccccceeeCCCCCCCccEEEecCCccccCcchhhccCCcC
Q 045118 99 EKLPHLEVLKLKQNSYLERKLACVGCSSFSQLKILHLKSMLWLEEWTMGAGAMPKLESLILNPCAYLRKLPEELWCIKSL 178 (221)
Q Consensus 99 ~~l~~L~~L~l~~~~~~~~~l~~~~~~~~~~L~~L~L~~~~~l~~~~~~~~~l~~L~~L~l~~~~~l~~~~~~~~~l~~L 178 (221)
..+++|+.|++++|.+.. ++ . ...+++|+.|++.+|. +++++ .++.+++|++|++++| .+++++ .+..+++|
T Consensus 125 ~~l~~L~~L~l~~n~l~~--~~-~-l~~~~~L~~L~l~~n~-l~~l~-~l~~l~~L~~L~ls~N-~i~~i~-~l~~L~~L 196 (199)
T d2omxa2 125 KNLTNLNRLELSSNTISD--IS-A-LSGLTSLQQLNFSSNQ-VTDLK-PLANLTTLERLDISSN-KVSDIS-VLAKLTNL 196 (199)
T ss_dssp TTCTTCSEEECCSSCCCC--CG-G-GTTCTTCSEEECCSSC-CCCCG-GGTTCTTCCEEECCSS-CCCCCG-GGGGCTTC
T ss_pred chhhhhHHhhhhhhhhcc--cc-c-cccccccccccccccc-ccCCc-cccCCCCCCEEECCCC-CCCCCc-cccCCCCC
Confidence 445555555555444332 21 1 3344555555555544 44432 2334555555555553 344443 24444444
Q ss_pred cE
Q 045118 179 CK 180 (221)
Q Consensus 179 ~~ 180 (221)
++
T Consensus 197 ~~ 198 (199)
T d2omxa2 197 ES 198 (199)
T ss_dssp SE
T ss_pred Cc
Confidence 44
No 3
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.60 E-value=3.1e-15 Score=112.45 Aligned_cols=149 Identities=26% Similarity=0.349 Sum_probs=109.4
Q ss_pred ChhhcCCCCCccEEEEEecCCccccchhHhhccCCCCcEEEeeecCceeeehhhccccCcCCCCccEEEeecccCCCCCc
Q 045118 16 TPDILGRLPNVRTFRISGDLSYYHSGVSKSLCKLHKLECLKLVNKGKMWQLSRMILSEYKFPPSLTQLSLSNTELMEDPM 95 (221)
Q Consensus 16 ~~~~l~~l~~Lr~L~l~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~L~~Llp~l~~~~~~L~~L~l~~~~~~~~~~ 95 (221)
....++.+++|++|+++++. ...++ .++.+++|++|+++++ +++. +|.+..+ ++|+.|++.+|.....
T Consensus 60 ~l~~l~~l~~L~~L~L~~n~---i~~l~-~~~~l~~L~~L~l~~n----~i~~-l~~l~~l-~~L~~L~l~~~~~~~~-- 127 (210)
T d1h6ta2 60 SVQGIQYLPNVTKLFLNGNK---LTDIK-PLANLKNLGWLFLDEN----KVKD-LSSLKDL-KKLKSLSLEHNGISDI-- 127 (210)
T ss_dssp CCTTGGGCTTCCEEECCSSC---CCCCG-GGTTCTTCCEEECCSS----CCCC-GGGGTTC-TTCCEEECTTSCCCCC--
T ss_pred CchhHhhCCCCCEEeCCCcc---ccCcc-ccccCccccccccccc----cccc-ccccccc-cccccccccccccccc--
Confidence 34457788888888888885 33333 4677888888888774 2333 5667777 8889998888877643
Q ss_pred hhhccCCCCcEEEecCCccCCceeeeeCCCCCCcccEEeccccccccceeeCCCCCCCccEEEecCCccccCcchhhccC
Q 045118 96 PTLEKLPHLEVLKLKQNSYLERKLACVGCSSFSQLKILHLKSMLWLEEWTMGAGAMPKLESLILNPCAYLRKLPEELWCI 175 (221)
Q Consensus 96 ~~l~~l~~L~~L~l~~~~~~~~~l~~~~~~~~~~L~~L~L~~~~~l~~~~~~~~~l~~L~~L~l~~~~~l~~~~~~~~~l 175 (221)
..+..+++++.++++.|.+.. .. . ...+++|+.++++++. +.+++ .+..+++|++|++++| .+++++ .+.++
T Consensus 128 ~~l~~l~~l~~l~~~~n~l~~--~~-~-~~~l~~L~~l~l~~n~-l~~i~-~l~~l~~L~~L~Ls~N-~i~~l~-~l~~l 199 (210)
T d1h6ta2 128 NGLVHLPQLESLYLGNNKITD--IT-V-LSRLTKLDTLSLEDNQ-ISDIV-PLAGLTKLQNLYLSKN-HISDLR-ALAGL 199 (210)
T ss_dssp GGGGGCTTCCEEECCSSCCCC--CG-G-GGGCTTCSEEECCSSC-CCCCG-GGTTCTTCCEEECCSS-CCCBCG-GGTTC
T ss_pred ccccccccccccccccccccc--cc-c-cccccccccccccccc-ccccc-cccCCCCCCEEECCCC-CCCCCh-hhcCC
Confidence 467788888988888777654 22 2 4467889999998887 66664 3567889999999885 577776 57888
Q ss_pred CcCcEEEcc
Q 045118 176 KSLCKLELH 184 (221)
Q Consensus 176 ~~L~~l~l~ 184 (221)
++|++|+++
T Consensus 200 ~~L~~L~Ls 208 (210)
T d1h6ta2 200 KNLDVLELF 208 (210)
T ss_dssp TTCSEEEEE
T ss_pred CCCCEEEcc
Confidence 899998875
No 4
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.53 E-value=3.8e-14 Score=112.37 Aligned_cols=167 Identities=18% Similarity=0.240 Sum_probs=115.1
Q ss_pred ChhhcCCCCCccEEEEEe-cCCccccchhHhhccCCCCcEEEeeecC-ce-----e----eehhh----------cc-cc
Q 045118 16 TPDILGRLPNVRTFRISG-DLSYYHSGVSKSLCKLHKLECLKLVNKG-KM-----W----QLSRM----------IL-SE 73 (221)
Q Consensus 16 ~~~~l~~l~~Lr~L~l~~-~~~~~~~~~~~~l~~l~~L~~L~l~~~~-~~-----~----~L~~L----------lp-~l 73 (221)
+|.+++++++|++|++++ +. ..+.+|+.++++++|++|+++++. .. + .|+.+ +| .+
T Consensus 68 lp~~l~~L~~L~~L~Ls~~N~--l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~N~~~~~~p~~l 145 (313)
T d1ogqa_ 68 IPSSLANLPYLNFLYIGGINN--LVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSI 145 (313)
T ss_dssp CCGGGGGCTTCSEEEEEEETT--EESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGG
T ss_pred CChHHhcCccccccccccccc--cccccccccccccccchhhhccccccccccccccchhhhcccccccccccccCchhh
Confidence 678899999999999987 44 556889999999999999998841 00 0 12221 44 56
Q ss_pred CcCCCCccEEEeecccCCCCCchhhccCCCC-cEEEecCCccCCc----------------------eeeeeCCCCCCcc
Q 045118 74 YKFPPSLTQLSLSNTELMEDPMPTLEKLPHL-EVLKLKQNSYLER----------------------KLACVGCSSFSQL 130 (221)
Q Consensus 74 ~~~~~~L~~L~l~~~~~~~~~~~~l~~l~~L-~~L~l~~~~~~~~----------------------~l~~~~~~~~~~L 130 (221)
..+ ++++.+++++|.+....+..+..+..+ +.+.++.|.+.+. ..+.. ...++.+
T Consensus 146 ~~l-~~L~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l~~~~l~l~~~~~~~~~~~~-~~~~~~l 223 (313)
T d1ogqa_ 146 SSL-PNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVL-FGSDKNT 223 (313)
T ss_dssp GGC-TTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCSEEECCSSEEEECCGGG-CCTTSCC
T ss_pred ccC-cccceeeccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-ccccccc
Confidence 667 777777777777654333455555554 5666655543211 01112 3346678
Q ss_pred cEEeccccccccceeeCCCCCCCccEEEecCCccccCcchhhccCCcCcEEEccCCC
Q 045118 131 KILHLKSMLWLEEWTMGAGAMPKLESLILNPCAYLRKLPEELWCIKSLCKLELHWPQ 187 (221)
Q Consensus 131 ~~L~L~~~~~l~~~~~~~~~l~~L~~L~l~~~~~l~~~~~~~~~l~~L~~l~l~~~~ 187 (221)
+.+++.++. +...+..++.+++|+.|++++|.-...+|..++++++|++|++.++.
T Consensus 224 ~~l~~~~~~-l~~~~~~~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~ 279 (313)
T d1ogqa_ 224 QKIHLAKNS-LAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNN 279 (313)
T ss_dssp SEEECCSSE-ECCBGGGCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSE
T ss_pred ccccccccc-ccccccccccccccccccCccCeecccCChHHhCCCCCCEEECcCCc
Confidence 888877776 45444567778999999999855444889999999999999998864
No 5
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.50 E-value=1.1e-13 Score=104.81 Aligned_cols=165 Identities=19% Similarity=0.255 Sum_probs=88.7
Q ss_pred CcceeceecCCCCChhhcCCCCCccEEEEEecCCccccchhHhhccCCCCcEEEeeecCceeeehhhccccCcCCCCccE
Q 045118 3 NLIFISALHPSSCTPDILGRLPNVRTFRISGDLSYYHSGVSKSLCKLHKLECLKLVNKGKMWQLSRMILSEYKFPPSLTQ 82 (221)
Q Consensus 3 ~L~~L~~~~~~~~~~~~l~~l~~Lr~L~l~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~L~~Llp~l~~~~~~L~~ 82 (221)
+|+.|...+......+.+++|++|++|+++++. . ..+. .+.++++|++++++++. ++. ++.+..+ ++|+.
T Consensus 42 ~L~~L~l~~~~i~~l~~l~~l~~L~~L~ls~n~--i-~~~~-~l~~l~~l~~l~~~~n~----~~~-i~~l~~l-~~L~~ 111 (227)
T d1h6ua2 42 GITTLSAFGTGVTTIEGVQYLNNLIGLELKDNQ--I-TDLA-PLKNLTKITELELSGNP----LKN-VSAIAGL-QSIKT 111 (227)
T ss_dssp TCCEEECTTSCCCCCTTGGGCTTCCEEECCSSC--C-CCCG-GGTTCCSCCEEECCSCC----CSC-CGGGTTC-TTCCE
T ss_pred CcCEEECCCCCCCcchhHhcCCCCcEeecCCce--e-eccc-ccccccccccccccccc----ccc-ccccccc-ccccc
Confidence 455555333333333557788888888888875 2 2222 37778888888887631 122 3455555 66666
Q ss_pred EEeecccCCCCCchhhccCCCCcEEEecCCccCCceeeeeCCCCCCcccEEeccccccccceeeCCCCCCCccEEEecCC
Q 045118 83 LSLSNTELMEDPMPTLEKLPHLEVLKLKQNSYLERKLACVGCSSFSQLKILHLKSMLWLEEWTMGAGAMPKLESLILNPC 162 (221)
Q Consensus 83 L~l~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~l~~~~~~~~~~L~~L~L~~~~~l~~~~~~~~~l~~L~~L~l~~~ 162 (221)
++++++..... ..+...+.++.+.++.+..... . . ....++|+.|++.++. +.++. .++.+++|+.|++++|
T Consensus 112 l~l~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~-~--~-~~~~~~L~~L~l~~n~-~~~~~-~l~~l~~L~~L~Ls~n 183 (227)
T d1h6ua2 112 LDLTSTQITDV--TPLAGLSNLQVLYLDLNQITNI-S--P-LAGLTNLQYLSIGNAQ-VSDLT-PLANLSKLTTLKADDN 183 (227)
T ss_dssp EECTTSCCCCC--GGGTTCTTCCEEECCSSCCCCC-G--G-GGGCTTCCEEECCSSC-CCCCG-GGTTCTTCCEEECCSS
T ss_pred ccccccccccc--chhccccchhhhhchhhhhchh-h--h-hccccccccccccccc-cccch-hhcccccceecccCCC
Confidence 66666654422 2344455555555544433221 1 1 2244556666665554 33332 2445566666666653
Q ss_pred ccccCcchhhccCCcCcEEEccCCC
Q 045118 163 AYLRKLPEELWCIKSLCKLELHWPQ 187 (221)
Q Consensus 163 ~~l~~~~~~~~~l~~L~~l~l~~~~ 187 (221)
.++.++ .+.++++|++|++.+++
T Consensus 184 -~l~~l~-~l~~l~~L~~L~Ls~N~ 206 (227)
T d1h6ua2 184 -KISDIS-PLASLPNLIEVHLKNNQ 206 (227)
T ss_dssp -CCCCCG-GGGGCTTCCEEECTTSC
T ss_pred -ccCCCh-hhcCCCCCCEEECcCCc
Confidence 445544 25556666666666553
No 6
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.46 E-value=1.7e-13 Score=106.27 Aligned_cols=153 Identities=18% Similarity=0.120 Sum_probs=109.1
Q ss_pred CcceeceecCCCC--ChhhcCCCCCccEEEEEecCCccccchhHhhccCCCCcEEEeeecC-----cee----eehhh--
Q 045118 3 NLIFISALHPSSC--TPDILGRLPNVRTFRISGDLSYYHSGVSKSLCKLHKLECLKLVNKG-----KMW----QLSRM-- 69 (221)
Q Consensus 3 ~L~~L~~~~~~~~--~~~~l~~l~~Lr~L~l~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~-----~~~----~L~~L-- 69 (221)
+++.|..-+.... .+..++++++|++|++++|. ...++ .++.+++|++|+++.+. ..+ +|+.+
T Consensus 32 ~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~---l~~l~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~l 107 (266)
T d1p9ag_ 32 DTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAE---LTKLQ-VDGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDV 107 (266)
T ss_dssp TCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSC---CCEEE-CCSCCTTCCEEECCSSCCSSCCCCTTTCTTCCEEEC
T ss_pred CCCEEECcCCcCCCcCHHHhhcccccccccccccc---ccccc-cccccccccccccccccccccccccccccccccccc
Confidence 4555553222222 33557888888888888874 23333 34667777887777631 000 22222
Q ss_pred -------cc--ccCcCCCCccEEEeecccCCCCCchhhccCCCCcEEEecCCccCCceeeeeCCCCCCcccEEecccccc
Q 045118 70 -------IL--SEYKFPPSLTQLSLSNTELMEDPMPTLEKLPHLEVLKLKQNSYLERKLACVGCSSFSQLKILHLKSMLW 140 (221)
Q Consensus 70 -------lp--~l~~~~~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~l~~~~~~~~~~L~~L~L~~~~~ 140 (221)
++ .+..+ .+++.|++.+|.+...+...+..+++++.+++++|.+... .+.. +..+++|++|+|+++.
T Consensus 108 ~~~~~~~~~~~~~~~l-~~l~~L~l~~n~l~~l~~~~~~~l~~l~~l~l~~N~l~~~-~~~~-~~~l~~L~~L~Ls~N~- 183 (266)
T d1p9ag_ 108 SFNRLTSLPLGALRGL-GELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTEL-PAGL-LNGLENLDTLLLQENS- 183 (266)
T ss_dssp CSSCCCCCCSSTTTTC-TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCC-CTTT-TTTCTTCCEEECCSSC-
T ss_pred cccccceeeccccccc-cccccccccccccceeccccccccccchhccccccccccc-Cccc-cccccccceeecccCC-
Confidence 22 45566 8999999999999988777788899999999999987652 1223 5678999999999998
Q ss_pred ccceeeCCCCCCCccEEEecCCc
Q 045118 141 LEEWTMGAGAMPKLESLILNPCA 163 (221)
Q Consensus 141 l~~~~~~~~~l~~L~~L~l~~~~ 163 (221)
++.+|..+..+++|+.|++++++
T Consensus 184 L~~lp~~~~~~~~L~~L~L~~Np 206 (266)
T d1p9ag_ 184 LYTIPKGFFGSHLLPFAFLHGNP 206 (266)
T ss_dssp CCCCCTTTTTTCCCSEEECCSCC
T ss_pred CcccChhHCCCCCCCEEEecCCC
Confidence 89998888889999999999876
No 7
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.43 E-value=9.9e-13 Score=102.74 Aligned_cols=175 Identities=19% Similarity=0.104 Sum_probs=124.4
Q ss_pred CcceeceecCCCC--ChhhcCCCCCccEEEEEecCCc----------------------cc-cchhHhhccCCCCcEEEe
Q 045118 3 NLIFISALHPSSC--TPDILGRLPNVRTFRISGDLSY----------------------YH-SGVSKSLCKLHKLECLKL 57 (221)
Q Consensus 3 ~L~~L~~~~~~~~--~~~~l~~l~~Lr~L~l~~~~~~----------------------~~-~~~~~~l~~l~~L~~L~l 57 (221)
++++|..-+.... .+..+.++++|++|+++++... .. ...+..+.++++|++|++
T Consensus 33 ~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~l~~L~~L~l 112 (284)
T d1ozna_ 33 ASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHL 112 (284)
T ss_dssp TCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCEEECcCCcCCCCCHHHhhccccccccccccccccccccccccccccccccccccccccccccchhhcccccCCEEec
Confidence 4556653322222 3356889999999999887510 00 111445677777888877
Q ss_pred eecCceeeehhhcc--ccCcCCCCccEEEeecccCCCCCchhhccCCCCcEEEecCCccCCceeeeeCCCCCCcccEEec
Q 045118 58 VNKGKMWQLSRMIL--SEYKFPPSLTQLSLSNTELMEDPMPTLEKLPHLEVLKLKQNSYLERKLACVGCSSFSQLKILHL 135 (221)
Q Consensus 58 ~~~~~~~~L~~Llp--~l~~~~~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~l~~~~~~~~~~L~~L~L 135 (221)
+.+. +.. ++ .+... ++|+.+++.+|.+...+...++.+++|+.|++++|.+... .+.. +.++++|+.+.+
T Consensus 113 ~~n~----~~~-~~~~~~~~~-~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~~l-~~~~-f~~l~~L~~l~l 184 (284)
T d1ozna_ 113 DRCG----LQE-LGPGLFRGL-AALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSV-PERA-FRGLHSLDRLLL 184 (284)
T ss_dssp TTSC----CCC-CCTTTTTTC-TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEE-CTTT-TTTCTTCCEEEC
T ss_pred CCcc----ccc-ccccccchh-cccchhhhccccccccChhHhccccchhhcccccCccccc-chhh-hccccccchhhh
Confidence 7631 111 22 45556 8999999999999887777888899999999998887541 1223 567889999999
Q ss_pred cccccccce-eeCCCCCCCccEEEecCCccccCc-chhhccCCcCcEEEccCCC
Q 045118 136 KSMLWLEEW-TMGAGAMPKLESLILNPCAYLRKL-PEELWCIKSLCKLELHWPQ 187 (221)
Q Consensus 136 ~~~~~l~~~-~~~~~~l~~L~~L~l~~~~~l~~~-~~~~~~l~~L~~l~l~~~~ 187 (221)
.++. +..+ +..++.+++|+.|+++++. +..+ +..++.+++|+++++.+++
T Consensus 185 ~~N~-l~~i~~~~f~~l~~L~~L~l~~N~-i~~~~~~~~~~~~~L~~L~l~~N~ 236 (284)
T d1ozna_ 185 HQNR-VAHVHPHAFRDLGRLMTLYLFANN-LSALPTEALAPLRALQYLRLNDNP 236 (284)
T ss_dssp CSSC-CCEECTTTTTTCTTCCEEECCSSC-CSCCCHHHHTTCTTCCEEECCSSC
T ss_pred hhcc-ccccChhHhhhhhhcccccccccc-cccccccccccccccCEEEecCCC
Confidence 9888 6656 5667889999999999854 4555 4578899999999999854
No 8
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.41 E-value=1.1e-12 Score=98.16 Aligned_cols=143 Identities=23% Similarity=0.283 Sum_probs=110.8
Q ss_pred CCCcceeceecCCCCChhhcCCCCCccEEEEEecCCccccchhHhhccCCCCcEEEeeecCceeeehhhccccCcCCCCc
Q 045118 1 LKNLIFISALHPSSCTPDILGRLPNVRTFRISGDLSYYHSGVSKSLCKLHKLECLKLVNKGKMWQLSRMILSEYKFPPSL 80 (221)
Q Consensus 1 L~~L~~L~~~~~~~~~~~~l~~l~~Lr~L~l~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~L~~Llp~l~~~~~~L 80 (221)
+++|++|..-.........++.+++|+.|+++++. ...++ .+.++++|+.|+++++.. .. ++.+..+ +++
T Consensus 67 l~~L~~L~L~~n~i~~l~~~~~l~~L~~L~l~~n~---i~~l~-~l~~l~~L~~L~l~~~~~----~~-~~~l~~l-~~l 136 (210)
T d1h6ta2 67 LPNVTKLFLNGNKLTDIKPLANLKNLGWLFLDENK---VKDLS-SLKDLKKLKSLSLEHNGI----SD-INGLVHL-PQL 136 (210)
T ss_dssp CTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSC---CCCGG-GGTTCTTCCEEECTTSCC----CC-CGGGGGC-TTC
T ss_pred CCCCCEEeCCCccccCccccccCcccccccccccc---ccccc-cccccccccccccccccc----cc-ccccccc-ccc
Confidence 46777776444333344567899999999999985 34455 588999999999987421 22 5577788 899
Q ss_pred cEEEeecccCCCCCchhhccCCCCcEEEecCCccCCceeeeeCCCCCCcccEEeccccccccceeeCCCCCCCccEEEec
Q 045118 81 TQLSLSNTELMEDPMPTLEKLPHLEVLKLKQNSYLERKLACVGCSSFSQLKILHLKSMLWLEEWTMGAGAMPKLESLILN 160 (221)
Q Consensus 81 ~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~l~~~~~~~~~~L~~L~L~~~~~l~~~~~~~~~l~~L~~L~l~ 160 (221)
+.+++++|.+... ..++.+++|+.+++++|.+.+ ++ . +..+++|+.|++++|. +++++ .+..+++|+.|+++
T Consensus 137 ~~l~~~~n~l~~~--~~~~~l~~L~~l~l~~n~l~~--i~-~-l~~l~~L~~L~Ls~N~-i~~l~-~l~~l~~L~~L~Ls 208 (210)
T d1h6ta2 137 ESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISD--IV-P-LAGLTKLQNLYLSKNH-ISDLR-ALAGLKNLDVLELF 208 (210)
T ss_dssp CEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCC--CG-G-GTTCTTCCEEECCSSC-CCBCG-GGTTCTTCSEEEEE
T ss_pred ccccccccccccc--ccccccccccccccccccccc--cc-c-ccCCCCCCEEECCCCC-CCCCh-hhcCCCCCCEEEcc
Confidence 9999999998754 467789999999999888764 33 3 5689999999999987 88876 46779999999987
Q ss_pred C
Q 045118 161 P 161 (221)
Q Consensus 161 ~ 161 (221)
+
T Consensus 209 ~ 209 (210)
T d1h6ta2 209 S 209 (210)
T ss_dssp E
T ss_pred C
Confidence 4
No 9
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.41 E-value=1.2e-12 Score=103.17 Aligned_cols=176 Identities=19% Similarity=0.159 Sum_probs=98.3
Q ss_pred CCcceeceecCCCC-Ch-hhcCCCCCccEEEEEecCCccccchhHhhccCCCCcEEEeeecC-cee------e-------
Q 045118 2 KNLIFISALHPSSC-TP-DILGRLPNVRTFRISGDLSYYHSGVSKSLCKLHKLECLKLVNKG-KMW------Q------- 65 (221)
Q Consensus 2 ~~L~~L~~~~~~~~-~~-~~l~~l~~Lr~L~l~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~-~~~------~------- 65 (221)
++++.|..-+.... ++ .++.++++|++|+++.+. .....+..+.++++|++|+++++. +.+ .
T Consensus 31 ~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~--~~~i~~~~f~~l~~L~~L~l~~n~l~~l~~~~~~~l~~L~~~ 108 (305)
T d1xkua_ 31 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNK--ISKISPGAFAPLVKLERLYLSKNQLKELPEKMPKTLQELRVH 108 (305)
T ss_dssp TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSC--CCCBCTTTTTTCTTCCEEECCSSCCSBCCSSCCTTCCEEECC
T ss_pred CCCCEEECcCCcCCCcChhHhhcccccccccccccc--ccccchhhhhCCCccCEecccCCccCcCccchhhhhhhhhcc
Confidence 34566653333222 33 468899999999999886 444456778899999999987631 000 0
Q ss_pred ---ehhh--------------------------cc-ccCcCCCCccEEEeecccCCCCCchhhccCCCCcEEEecCCccC
Q 045118 66 ---LSRM--------------------------IL-SEYKFPPSLTQLSLSNTELMEDPMPTLEKLPHLEVLKLKQNSYL 115 (221)
Q Consensus 66 ---L~~L--------------------------lp-~l~~~~~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~ 115 (221)
+..+ .+ .+..+ ++|+.+++.+|.+...+. ..+++|+.|++++|...
T Consensus 109 ~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~l-~~L~~l~l~~n~l~~l~~---~~~~~L~~L~l~~n~~~ 184 (305)
T d1xkua_ 109 ENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGM-KKLSYIRIADTNITTIPQ---GLPPSLTELHLDGNKIT 184 (305)
T ss_dssp SSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGC-TTCCEEECCSSCCCSCCS---SCCTTCSEEECTTSCCC
T ss_pred ccchhhhhhhhhhccccccccccccccccccCCCccccccc-cccCccccccCCccccCc---ccCCccCEEECCCCcCC
Confidence 1111 01 23444 566666766666554331 12456666666555433
Q ss_pred CceeeeeCCCCCCcccEEecccccccccee-eCCCCCCCccEEEecCCccccCcchhhccCCcCcEEEccCCC
Q 045118 116 ERKLACVGCSSFSQLKILHLKSMLWLEEWT-MGAGAMPKLESLILNPCAYLRKLPEELWCIKSLCKLELHWPQ 187 (221)
Q Consensus 116 ~~~l~~~~~~~~~~L~~L~L~~~~~l~~~~-~~~~~l~~L~~L~l~~~~~l~~~~~~~~~l~~L~~l~l~~~~ 187 (221)
.. .+.. +..++.++.|+++++. +.+++ ..+..+++|+.|++++| .++.+|.++..+++|++|+++++.
T Consensus 185 ~~-~~~~-~~~~~~l~~L~~s~n~-l~~~~~~~~~~l~~L~~L~L~~N-~L~~lp~~l~~l~~L~~L~Ls~N~ 253 (305)
T d1xkua_ 185 KV-DAAS-LKGLNNLAKLGLSFNS-ISAVDNGSLANTPHLRELHLNNN-KLVKVPGGLADHKYIQVVYLHNNN 253 (305)
T ss_dssp EE-CTGG-GTTCTTCCEEECCSSC-CCEECTTTGGGSTTCCEEECCSS-CCSSCCTTTTTCSSCCEEECCSSC
T ss_pred CC-ChhH-hhcccccccccccccc-ccccccccccccccceeeecccc-cccccccccccccCCCEEECCCCc
Confidence 21 1222 3445556666666554 44442 22344566666666663 455566566666666666666543
No 10
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.40 E-value=1.6e-12 Score=105.09 Aligned_cols=149 Identities=22% Similarity=0.301 Sum_probs=87.1
Q ss_pred hcCCCCCccEEEEEecCCccccchhHhhccCCCCcEEEeeecCceeeehhhccccCcCCCCccEEEeecccCCCCCchhh
Q 045118 19 ILGRLPNVRTFRISGDLSYYHSGVSKSLCKLHKLECLKLVNKGKMWQLSRMILSEYKFPPSLTQLSLSNTELMEDPMPTL 98 (221)
Q Consensus 19 ~l~~l~~Lr~L~l~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~L~~Llp~l~~~~~~L~~L~l~~~~~~~~~~~~l 98 (221)
..+.+++|++|+++++. ...+ +.+..+++|+.|++.++ .+.. ++.+..+ ++|+.|+++++.+...+ .+
T Consensus 214 ~~~~~~~L~~L~l~~n~---l~~~-~~l~~l~~L~~L~l~~n----~l~~-~~~~~~~-~~L~~L~l~~~~l~~~~--~~ 281 (384)
T d2omza2 214 PLGILTNLDELSLNGNQ---LKDI-GTLASLTNLTDLDLANN----QISN-LAPLSGL-TKLTELKLGANQISNIS--PL 281 (384)
T ss_dssp GGGGCTTCCEEECCSSC---CCCC-GGGGGCTTCSEEECCSS----CCCC-CGGGTTC-TTCSEEECCSSCCCCCG--GG
T ss_pred cccccCCCCEEECCCCC---CCCc-chhhcccccchhccccC----ccCC-CCccccc-ccCCEeeccCcccCCCC--cc
Confidence 35667788888888774 2333 35677888888888763 1122 3455566 67777777777665432 45
Q ss_pred ccCCCCcEEEecCCccCCceeeeeCCCCCCcccEEeccccccccceeeCCCCCCCccEEEecCCccccCcchhhccCCcC
Q 045118 99 EKLPHLEVLKLKQNSYLERKLACVGCSSFSQLKILHLKSMLWLEEWTMGAGAMPKLESLILNPCAYLRKLPEELWCIKSL 178 (221)
Q Consensus 99 ~~l~~L~~L~l~~~~~~~~~l~~~~~~~~~~L~~L~L~~~~~l~~~~~~~~~l~~L~~L~l~~~~~l~~~~~~~~~l~~L 178 (221)
..++.++.+.+..|.+.+ +. . ...++.++.|+++++. +++++ .+..+++|++|++++| .++.++ .+..+++|
T Consensus 282 ~~~~~l~~l~~~~n~l~~--~~-~-~~~~~~l~~L~ls~n~-l~~l~-~l~~l~~L~~L~L~~n-~l~~l~-~l~~l~~L 353 (384)
T d2omza2 282 AGLTALTNLELNENQLED--IS-P-ISNLKNLTYLTLYFNN-ISDIS-PVSSLTKLQRLFFANN-KVSDVS-SLANLTNI 353 (384)
T ss_dssp TTCTTCSEEECCSSCCSC--CG-G-GGGCTTCSEEECCSSC-CSCCG-GGGGCTTCCEEECCSS-CCCCCG-GGGGCTTC
T ss_pred cccccccccccccccccc--cc-c-cchhcccCeEECCCCC-CCCCc-ccccCCCCCEEECCCC-CCCCCh-hHcCCCCC
Confidence 556666666665555443 11 1 3345566666666554 45443 2445666666666664 444544 35566666
Q ss_pred cEEEccCCC
Q 045118 179 CKLELHWPQ 187 (221)
Q Consensus 179 ~~l~l~~~~ 187 (221)
++|++.++.
T Consensus 354 ~~L~l~~N~ 362 (384)
T d2omza2 354 NWLSAGHNQ 362 (384)
T ss_dssp CEEECCSSC
T ss_pred CEEECCCCc
Confidence 666666543
No 11
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.40 E-value=2.7e-12 Score=100.22 Aligned_cols=156 Identities=19% Similarity=0.153 Sum_probs=119.3
Q ss_pred CCccEEEEEecCCccccchh-HhhccCCCCcEEEeeecC-cee---------eehhh----------c-c-ccCcCCCCc
Q 045118 24 PNVRTFRISGDLSYYHSGVS-KSLCKLHKLECLKLVNKG-KMW---------QLSRM----------I-L-SEYKFPPSL 80 (221)
Q Consensus 24 ~~Lr~L~l~~~~~~~~~~~~-~~l~~l~~L~~L~l~~~~-~~~---------~L~~L----------l-p-~l~~~~~~L 80 (221)
+++++|++++|. ...++ ..+.++++|++|+++++. ..+ .+.++ + + .+..+ ++|
T Consensus 32 ~~~~~L~Ls~N~---i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~l-~~L 107 (284)
T d1ozna_ 32 AASQRIFLHGNR---ISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGL-GRL 107 (284)
T ss_dssp TTCSEEECTTSC---CCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTC-TTC
T ss_pred CCCCEEECcCCc---CCCCCHHHhhccccccccccccccccccccccccccccccccccccccccccccchhhccc-ccC
Confidence 578999999995 44555 579999999999998731 110 11111 3 3 67778 899
Q ss_pred cEEEeecccCCCCCchhhccCCCCcEEEecCCccCCceee-eeCCCCCCcccEEeccccccccceee-CCCCCCCccEEE
Q 045118 81 TQLSLSNTELMEDPMPTLEKLPHLEVLKLKQNSYLERKLA-CVGCSSFSQLKILHLKSMLWLEEWTM-GAGAMPKLESLI 158 (221)
Q Consensus 81 ~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~l~-~~~~~~~~~L~~L~L~~~~~l~~~~~-~~~~l~~L~~L~ 158 (221)
+.|++++|.+.......+...++|+.+++++|.+.. ++ .. +..+++|+.|++.++. ++.++. .+..+++|+.+.
T Consensus 108 ~~L~l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~--i~~~~-f~~~~~L~~L~l~~N~-l~~l~~~~f~~l~~L~~l~ 183 (284)
T d1ozna_ 108 HTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQA--LPDDT-FRDLGNLTHLFLHGNR-ISSVPERAFRGLHSLDRLL 183 (284)
T ss_dssp CEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCC--CCTTT-TTTCTTCCEEECCSSC-CCEECTTTTTTCTTCCEEE
T ss_pred CEEecCCcccccccccccchhcccchhhhccccccc--cChhH-hccccchhhcccccCc-ccccchhhhccccccchhh
Confidence 999999999887666678889999999999888765 32 23 5568899999999987 787743 456789999999
Q ss_pred ecCCccccCcchhhccCCcCcEEEccCCC
Q 045118 159 LNPCAYLRKLPEELWCIKSLCKLELHWPQ 187 (221)
Q Consensus 159 l~~~~~l~~~~~~~~~l~~L~~l~l~~~~ 187 (221)
+++|....-.|..+..+++|+++++..+.
T Consensus 184 l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 212 (284)
T d1ozna_ 184 LHQNRVAHVHPHAFRDLGRLMTLYLFANN 212 (284)
T ss_dssp CCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred hhhccccccChhHhhhhhhcccccccccc
Confidence 99865444447788999999999998865
No 12
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.38 E-value=2.4e-12 Score=101.75 Aligned_cols=109 Identities=20% Similarity=0.137 Sum_probs=70.2
Q ss_pred CCccEEEEEecCCccccchhHhhccCCCCcEEEeee-cCceeeehhhcc-ccCcCCCCccEEEeecccCCCCCchhhccC
Q 045118 24 PNVRTFRISGDLSYYHSGVSKSLCKLHKLECLKLVN-KGKMWQLSRMIL-SEYKFPPSLTQLSLSNTELMEDPMPTLEKL 101 (221)
Q Consensus 24 ~~Lr~L~l~~~~~~~~~~~~~~l~~l~~L~~L~l~~-~~~~~~L~~Llp-~l~~~~~~L~~L~l~~~~~~~~~~~~l~~l 101 (221)
.++++|+++++.......+|+.++++++|++|++++ + ++..-+| .++.+ ++|++|++++|.+....+..+..+
T Consensus 50 ~~v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L~Ls~~N----~l~g~iP~~i~~L-~~L~~L~Ls~N~l~~~~~~~~~~~ 124 (313)
T d1ogqa_ 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGIN----NLVGPIPPAIAKL-TQLHYLYITHTNVSGAIPDFLSQI 124 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEET----TEESCCCGGGGGC-TTCSEEEEEEECCEEECCGGGGGC
T ss_pred EEEEEEECCCCCCCCCCCCChHHhcCcccccccccccc----ccccccccccccc-cccchhhhccccccccccccccch
Confidence 368899999986222336889999999999999986 3 1110156 77777 788888888887765544555566
Q ss_pred CCCcEEEecCCccCCceeeeeCCCCCCcccEEeccccc
Q 045118 102 PHLEVLKLKQNSYLERKLACVGCSSFSQLKILHLKSML 139 (221)
Q Consensus 102 ~~L~~L~l~~~~~~~~~l~~~~~~~~~~L~~L~L~~~~ 139 (221)
++|+.++++.|.+... ++.. +..++.++.++++++.
T Consensus 125 ~~L~~l~l~~N~~~~~-~p~~-l~~l~~L~~l~l~~n~ 160 (313)
T d1ogqa_ 125 KTLVTLDFSYNALSGT-LPPS-ISSLPNLVGITFDGNR 160 (313)
T ss_dssp TTCCEEECCSSEEESC-CCGG-GGGCTTCCEEECCSSC
T ss_pred hhhccccccccccccc-Cchh-hccCcccceeeccccc
Confidence 6666666665554332 3333 4445555555555443
No 13
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.37 E-value=3.3e-13 Score=105.75 Aligned_cols=163 Identities=18% Similarity=0.149 Sum_probs=111.9
Q ss_pred hhhcCCCCCccEEEEEecCCccccchhHhhccCCCCcEEEeeecCceeeehhh-cc-ccCcCCCCccEEEeeccc-CCCC
Q 045118 17 PDILGRLPNVRTFRISGDLSYYHSGVSKSLCKLHKLECLKLVNKGKMWQLSRM-IL-SEYKFPPSLTQLSLSNTE-LMED 93 (221)
Q Consensus 17 ~~~l~~l~~Lr~L~l~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~L~~L-lp-~l~~~~~~L~~L~l~~~~-~~~~ 93 (221)
...+.++++|++|+++++. ..+..+..+.++++|++|++++... +..- +. ....+ ++|++|++++|. +...
T Consensus 64 ~~l~~~c~~L~~L~L~~~~--l~~~~~~~l~~~~~L~~L~Ls~c~~---itd~~l~~l~~~~-~~L~~L~ls~c~~~~~~ 137 (284)
T d2astb2 64 HGILSQCSKLQNLSLEGLR--LSDPIVNTLAKNSNLVRLNLSGCSG---FSEFALQTLLSSC-SRLDELNLSWCFDFTEK 137 (284)
T ss_dssp HHHHTTBCCCSEEECTTCB--CCHHHHHHHTTCTTCSEEECTTCBS---CCHHHHHHHHHHC-TTCCEEECCCCTTCCHH
T ss_pred HHHHHhCCCcccccccccC--CCcHHHHHHhcCCCCcCcccccccc---ccccccchhhHHH-Hhccccccccccccccc
Confidence 3447788999999988885 5667778888889999999976210 0100 22 22445 899999999875 3322
Q ss_pred Cch-hhc-cCCCCcEEEecCCc--cCCceeeeeCCCCCCcccEEeccccccccce-eeCCCCCCCccEEEecCCccccCc
Q 045118 94 PMP-TLE-KLPHLEVLKLKQNS--YLERKLACVGCSSFSQLKILHLKSMLWLEEW-TMGAGAMPKLESLILNPCAYLRKL 168 (221)
Q Consensus 94 ~~~-~l~-~l~~L~~L~l~~~~--~~~~~l~~~~~~~~~~L~~L~L~~~~~l~~~-~~~~~~l~~L~~L~l~~~~~l~~~ 168 (221)
... .+. ..++|+.|+++++. +....+... ...+|+|++|++++|..+++- ...+..+++|++|++++|..++.-
T Consensus 138 ~~~~~~~~~~~~L~~L~l~~~~~~i~~~~l~~l-~~~~~~L~~L~L~~~~~itd~~~~~l~~~~~L~~L~L~~C~~i~~~ 216 (284)
T d2astb2 138 HVQVAVAHVSETITQLNLSGYRKNLQKSDLSTL-VRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPE 216 (284)
T ss_dssp HHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHH-HHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGG
T ss_pred cchhhhcccccccchhhhccccccccccccccc-ccccccccccccccccCCCchhhhhhcccCcCCEEECCCCCCCChH
Confidence 221 233 35789999997653 222223323 345789999999998766543 344567899999999999877643
Q ss_pred -chhhccCCcCcEEEccCC
Q 045118 169 -PEELWCIKSLCKLELHWP 186 (221)
Q Consensus 169 -~~~~~~l~~L~~l~l~~~ 186 (221)
...++++++|++|++.+|
T Consensus 217 ~l~~L~~~~~L~~L~l~~~ 235 (284)
T d2astb2 217 TLLELGEIPTLKTLQVFGI 235 (284)
T ss_dssp GGGGGGGCTTCCEEECTTS
T ss_pred HHHHHhcCCCCCEEeeeCC
Confidence 345788999999999887
No 14
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.37 E-value=9.4e-14 Score=100.01 Aligned_cols=104 Identities=13% Similarity=0.114 Sum_probs=51.9
Q ss_pred CCccEEEeecccCCCCCchhhccCCCCcEEEecCCccCCceeeeeCCCCCCcccEEeccccccccceee--CCCCCCCcc
Q 045118 78 PSLTQLSLSNTELMEDPMPTLEKLPHLEVLKLKQNSYLERKLACVGCSSFSQLKILHLKSMLWLEEWTM--GAGAMPKLE 155 (221)
Q Consensus 78 ~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~l~~~~~~~~~~L~~L~L~~~~~l~~~~~--~~~~l~~L~ 155 (221)
++|++|++++|.+... +.++.+++|++|++++|.+.. ++..-...+++|+.|++.+|. +.+++. .+..+++|+
T Consensus 41 ~~L~~L~Ls~N~i~~l--~~~~~l~~L~~L~ls~N~i~~--l~~~~~~~l~~L~~L~L~~N~-i~~~~~l~~l~~l~~L~ 115 (162)
T d1a9na_ 41 DQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICR--IGEGLDQALPDLTELILTNNS-LVELGDLDPLASLKSLT 115 (162)
T ss_dssp TCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCE--ECSCHHHHCTTCCEEECCSCC-CCCGGGGGGGGGCTTCC
T ss_pred ccCCEEECCCCCCCcc--CCcccCcchhhhhcccccccC--CCccccccccccccceecccc-ccccccccccccccccc
Confidence 4555555555554432 234445555555555554432 211101234555555555554 333321 234466666
Q ss_pred EEEecCCccccCcc----hhhccCCcCcEEEccCCC
Q 045118 156 SLILNPCAYLRKLP----EELWCIKSLCKLELHWPQ 187 (221)
Q Consensus 156 ~L~l~~~~~l~~~~----~~~~~l~~L~~l~l~~~~ 187 (221)
++++.+|+ +...| ..+..+|+|+.|+-....
T Consensus 116 ~L~l~~N~-i~~~~~~r~~~i~~lp~L~~LD~~~i~ 150 (162)
T d1a9na_ 116 YLCILRNP-VTNKKHYRLYVIYKVPQVRVLDFQKVK 150 (162)
T ss_dssp EEECCSSG-GGGSTTHHHHHHHHCTTCSEETTEECC
T ss_pred hhhcCCCc-cccccchHHHHHHHCCCcCeeCCCCCC
Confidence 66666643 33333 246778888888765544
No 15
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.36 E-value=3.4e-12 Score=94.65 Aligned_cols=139 Identities=22% Similarity=0.271 Sum_probs=104.8
Q ss_pred CCCcceeceecCCCCChhhcCCCCCccEEEEEecCCccccchhHhhccCCCCcEEEeeecCceeeehhhccccCcCCCCc
Q 045118 1 LKNLIFISALHPSSCTPDILGRLPNVRTFRISGDLSYYHSGVSKSLCKLHKLECLKLVNKGKMWQLSRMILSEYKFPPSL 80 (221)
Q Consensus 1 L~~L~~L~~~~~~~~~~~~l~~l~~Lr~L~l~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~L~~Llp~l~~~~~~L 80 (221)
+++|++|...+........++++++|++|+++.+. ...++ .+.++++|+.|+++++.. .. ++.+..+ ++|
T Consensus 61 l~nL~~L~Ls~N~l~~~~~l~~l~~L~~L~l~~n~---~~~~~-~l~~l~~L~~L~l~~~~~----~~-~~~~~~l-~~L 130 (199)
T d2omxa2 61 LNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQ---IADIT-PLANLTNLTGLTLFNNQI----TD-IDPLKNL-TNL 130 (199)
T ss_dssp CTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSC---CCCCG-GGTTCTTCSEEECCSSCC----CC-CGGGTTC-TTC
T ss_pred CCCcCcCccccccccCcccccCCcccccccccccc---ccccc-cccccccccccccccccc----cc-ccccchh-hhh
Confidence 45677776444333344458999999999999985 33333 478999999999987411 11 4467788 999
Q ss_pred cEEEeecccCCCCCchhhccCCCCcEEEecCCccCCceeeeeCCCCCCcccEEeccccccccceeeCCCCCCCccEE
Q 045118 81 TQLSLSNTELMEDPMPTLEKLPHLEVLKLKQNSYLERKLACVGCSSFSQLKILHLKSMLWLEEWTMGAGAMPKLESL 157 (221)
Q Consensus 81 ~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~l~~~~~~~~~~L~~L~L~~~~~l~~~~~~~~~l~~L~~L 157 (221)
+.|++++|.+... +.+..++++++|++.+|.+.. ++ . ++++++|+.|++++|. +++++ .++.+++|+.|
T Consensus 131 ~~L~l~~n~l~~~--~~l~~~~~L~~L~l~~n~l~~--l~-~-l~~l~~L~~L~ls~N~-i~~i~-~l~~L~~L~~L 199 (199)
T d2omxa2 131 NRLELSSNTISDI--SALSGLTSLQQLNFSSNQVTD--LK-P-LANLTTLERLDISSNK-VSDIS-VLAKLTNLESL 199 (199)
T ss_dssp SEEECCSSCCCCC--GGGTTCTTCSEEECCSSCCCC--CG-G-GTTCTTCCEEECCSSC-CCCCG-GGGGCTTCSEE
T ss_pred HHhhhhhhhhccc--ccccccccccccccccccccC--Cc-c-ccCCCCCCEEECCCCC-CCCCc-cccCCCCCCcC
Confidence 9999999998754 468899999999999887765 33 3 6689999999999997 88775 35668888765
No 16
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.31 E-value=1.2e-11 Score=97.34 Aligned_cols=107 Identities=21% Similarity=0.193 Sum_probs=87.6
Q ss_pred CCCccEEEeecccCCCCCchhhccCCCCcEEEecCCccCCceeeeeCCCCCCcccEEeccccccccceeeCCCCCCCccE
Q 045118 77 PPSLTQLSLSNTELMEDPMPTLEKLPHLEVLKLKQNSYLERKLACVGCSSFSQLKILHLKSMLWLEEWTMGAGAMPKLES 156 (221)
Q Consensus 77 ~~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~l~~~~~~~~~~L~~L~L~~~~~l~~~~~~~~~l~~L~~ 156 (221)
+++|+.|++++|.........+..++.++.|++++|.+... .+.. +..+++|++|+|++|. ++.++.++..+++|+.
T Consensus 170 ~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s~n~l~~~-~~~~-~~~l~~L~~L~L~~N~-L~~lp~~l~~l~~L~~ 246 (305)
T d1xkua_ 170 PPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAV-DNGS-LANTPHLRELHLNNNK-LVKVPGGLADHKYIQV 246 (305)
T ss_dssp CTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEE-CTTT-GGGSTTCCEEECCSSC-CSSCCTTTTTCSSCCE
T ss_pred CCccCEEECCCCcCCCCChhHhhcccccccccccccccccc-cccc-ccccccceeeeccccc-ccccccccccccCCCE
Confidence 38999999999988876667888999999999998877552 1223 5568999999999997 8899888888999999
Q ss_pred EEecCCccccCcchh-------hccCCcCcEEEccCCC
Q 045118 157 LILNPCAYLRKLPEE-------LWCIKSLCKLELHWPQ 187 (221)
Q Consensus 157 L~l~~~~~l~~~~~~-------~~~l~~L~~l~l~~~~ 187 (221)
|++++| .++.++.. ....++|+.+++.+++
T Consensus 247 L~Ls~N-~i~~i~~~~f~~~~~~~~~~~L~~L~L~~N~ 283 (305)
T d1xkua_ 247 VYLHNN-NISAIGSNDFCPPGYNTKKASYSGVSLFSNP 283 (305)
T ss_dssp EECCSS-CCCCCCTTSSSCSSCCTTSCCCSEEECCSSS
T ss_pred EECCCC-ccCccChhhccCcchhcccCCCCEEECCCCc
Confidence 999994 57766532 3457889999999987
No 17
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.30 E-value=2.2e-11 Score=98.21 Aligned_cols=148 Identities=22% Similarity=0.288 Sum_probs=78.7
Q ss_pred hhcCCCCCccEEEEEecCCccccchhHhhccCCCCcEEEeeecCceeeehhhccccCcCCCCccEEEeecccCCCCCchh
Q 045118 18 DILGRLPNVRTFRISGDLSYYHSGVSKSLCKLHKLECLKLVNKGKMWQLSRMILSEYKFPPSLTQLSLSNTELMEDPMPT 97 (221)
Q Consensus 18 ~~l~~l~~Lr~L~l~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~L~~Llp~l~~~~~~L~~L~l~~~~~~~~~~~~ 97 (221)
+.++.+++|+.|+++++. . ..++ .+..+++|++|+++++ .+.. ++.+..+ +.++.+.+..|.+... ..
T Consensus 235 ~~l~~l~~L~~L~l~~n~--l-~~~~-~~~~~~~L~~L~l~~~----~l~~-~~~~~~~-~~l~~l~~~~n~l~~~--~~ 302 (384)
T d2omza2 235 GTLASLTNLTDLDLANNQ--I-SNLA-PLSGLTKLTELKLGAN----QISN-ISPLAGL-TALTNLELNENQLEDI--SP 302 (384)
T ss_dssp GGGGGCTTCSEEECCSSC--C-CCCG-GGTTCTTCSEEECCSS----CCCC-CGGGTTC-TTCSEEECCSSCCSCC--GG
T ss_pred chhhcccccchhccccCc--c-CCCC-cccccccCCEeeccCc----ccCC-CCccccc-cccccccccccccccc--cc
Confidence 345556666666666653 2 2222 2555666666666552 1111 3344445 5666666666655432 34
Q ss_pred hccCCCCcEEEecCCccCCceeeeeCCCCCCcccEEeccccccccceeeCCCCCCCccEEEecCCccccCcchhhccCCc
Q 045118 98 LEKLPHLEVLKLKQNSYLERKLACVGCSSFSQLKILHLKSMLWLEEWTMGAGAMPKLESLILNPCAYLRKLPEELWCIKS 177 (221)
Q Consensus 98 l~~l~~L~~L~l~~~~~~~~~l~~~~~~~~~~L~~L~L~~~~~l~~~~~~~~~l~~L~~L~l~~~~~l~~~~~~~~~l~~ 177 (221)
+..+++++.|++++|.+.+ ++ . +..+++|+.|++++|. +++++ .++.+++|++|++++| .++.++. +.++++
T Consensus 303 ~~~~~~l~~L~ls~n~l~~--l~-~-l~~l~~L~~L~L~~n~-l~~l~-~l~~l~~L~~L~l~~N-~l~~l~~-l~~l~~ 374 (384)
T d2omza2 303 ISNLKNLTYLTLYFNNISD--IS-P-VSSLTKLQRLFFANNK-VSDVS-SLANLTNINWLSAGHN-QISDLTP-LANLTR 374 (384)
T ss_dssp GGGCTTCSEEECCSSCCSC--CG-G-GGGCTTCCEEECCSSC-CCCCG-GGGGCTTCCEEECCSS-CCCBCGG-GTTCTT
T ss_pred cchhcccCeEECCCCCCCC--Cc-c-cccCCCCCEEECCCCC-CCCCh-hHcCCCCCCEEECCCC-cCCCChh-hccCCC
Confidence 5556666666666655543 22 2 3356666666666664 55543 3445666666666653 4444442 556666
Q ss_pred CcEEEccC
Q 045118 178 LCKLELHW 185 (221)
Q Consensus 178 L~~l~l~~ 185 (221)
|++|++++
T Consensus 375 L~~L~L~~ 382 (384)
T d2omza2 375 ITQLGLND 382 (384)
T ss_dssp CSEEECCC
T ss_pred CCEeeCCC
Confidence 66666653
No 18
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.28 E-value=1.4e-12 Score=102.05 Aligned_cols=175 Identities=18% Similarity=0.132 Sum_probs=113.2
Q ss_pred CCcceeceecCC--CCChhhcCCCCCccEEEEEecCCccccchhHhhccCCCCcEEEeeecCceeeehhhcc-ccCcCCC
Q 045118 2 KNLIFISALHPS--SCTPDILGRLPNVRTFRISGDLSYYHSGVSKSLCKLHKLECLKLVNKGKMWQLSRMIL-SEYKFPP 78 (221)
Q Consensus 2 ~~L~~L~~~~~~--~~~~~~l~~l~~Lr~L~l~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~L~~Llp-~l~~~~~ 78 (221)
++|++|..-+.. +..+..++++++|++|+++++..-....+......+++|++|++++....- =.. ++ .+...++
T Consensus 71 ~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~L~~L~ls~c~~~~-~~~-~~~~~~~~~~ 148 (284)
T d2astb2 71 SKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFT-EKH-VQVAVAHVSE 148 (284)
T ss_dssp CCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCC-HHH-HHHHHHHSCT
T ss_pred CCcccccccccCCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHHhccccccccccccc-ccc-chhhhccccc
Confidence 567777643332 226777899999999999987421222344455678999999998721100 011 22 3334447
Q ss_pred CccEEEeeccc--CCCCCchh-hccCCCCcEEEecCCccCCceeeeeCCCCCCcccEEeccccccccce-eeCCCCCCCc
Q 045118 79 SLTQLSLSNTE--LMEDPMPT-LEKLPHLEVLKLKQNSYLERKLACVGCSSFSQLKILHLKSMLWLEEW-TMGAGAMPKL 154 (221)
Q Consensus 79 ~L~~L~l~~~~--~~~~~~~~-l~~l~~L~~L~l~~~~~~~~~l~~~~~~~~~~L~~L~L~~~~~l~~~-~~~~~~l~~L 154 (221)
+|+.|+++++. +....... ...+++|++|++++|....+..... +..+++|++|++++|..+.+- ...++.+|+|
T Consensus 149 ~L~~L~l~~~~~~i~~~~l~~l~~~~~~L~~L~L~~~~~itd~~~~~-l~~~~~L~~L~L~~C~~i~~~~l~~L~~~~~L 227 (284)
T d2astb2 149 TITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQE-FFQLNYLQHLSLSRCYDIIPETLLELGEIPTL 227 (284)
T ss_dssp TCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGG-GGGCTTCCEEECTTCTTCCGGGGGGGGGCTTC
T ss_pred ccchhhhcccccccccccccccccccccccccccccccCCCchhhhh-hcccCcCCEEECCCCCCCChHHHHHHhcCCCC
Confidence 99999999864 33333333 3578999999998876433223334 667899999999999866644 2345678999
Q ss_pred cEEEecCCccccCcchhhccCCcCc
Q 045118 155 ESLILNPCAYLRKLPEELWCIKSLC 179 (221)
Q Consensus 155 ~~L~l~~~~~l~~~~~~~~~l~~L~ 179 (221)
+.|++.+|-.-..++.....+|+|+
T Consensus 228 ~~L~l~~~~~d~~l~~l~~~lp~L~ 252 (284)
T d2astb2 228 KTLQVFGIVPDGTLQLLKEALPHLQ 252 (284)
T ss_dssp CEEECTTSSCTTCHHHHHHHSTTSE
T ss_pred CEEeeeCCCCHHHHHHHHHhCcccc
Confidence 9999999743333333345677764
No 19
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.24 E-value=4.7e-11 Score=89.97 Aligned_cols=164 Identities=18% Similarity=0.237 Sum_probs=122.6
Q ss_pred CCCcceeceecCCCCChhhcCCCCCccEEEEEecCCccccchhHhhccCCCCcEEEeeecCceeeehhhccccCcCCCCc
Q 045118 1 LKNLIFISALHPSSCTPDILGRLPNVRTFRISGDLSYYHSGVSKSLCKLHKLECLKLVNKGKMWQLSRMILSEYKFPPSL 80 (221)
Q Consensus 1 L~~L~~L~~~~~~~~~~~~l~~l~~Lr~L~l~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~L~~Llp~l~~~~~~L 80 (221)
|++|+.|............++++++++.+.++++. ...+ +.+.++++|+++++++... .. ++.+... +.+
T Consensus 62 l~~L~~L~ls~n~i~~~~~l~~l~~l~~l~~~~n~---~~~i-~~l~~l~~L~~l~l~~~~~----~~-~~~~~~~-~~~ 131 (227)
T d1h6ua2 62 LNNLIGLELKDNQITDLAPLKNLTKITELELSGNP---LKNV-SAIAGLQSIKTLDLTSTQI----TD-VTPLAGL-SNL 131 (227)
T ss_dssp CTTCCEEECCSSCCCCCGGGTTCCSCCEEECCSCC---CSCC-GGGTTCTTCCEEECTTSCC----CC-CGGGTTC-TTC
T ss_pred CCCCcEeecCCceeecccccccccccccccccccc---cccc-ccccccccccccccccccc----cc-cchhccc-cch
Confidence 46677776443333344458999999999999885 2333 3578899999999987311 11 3345556 889
Q ss_pred cEEEeecccCCCCCchhhccCCCCcEEEecCCccCCceeeeeCCCCCCcccEEeccccccccceeeCCCCCCCccEEEec
Q 045118 81 TQLSLSNTELMEDPMPTLEKLPHLEVLKLKQNSYLERKLACVGCSSFSQLKILHLKSMLWLEEWTMGAGAMPKLESLILN 160 (221)
Q Consensus 81 ~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~l~~~~~~~~~~L~~L~L~~~~~l~~~~~~~~~l~~L~~L~l~ 160 (221)
+.+.+.++.+... ..+..+++|++|.+++|.... .. . ++.+++|+.|++++|. +++++ .++.+++|++|+++
T Consensus 132 ~~l~~~~~~~~~~--~~~~~~~~L~~L~l~~n~~~~--~~-~-l~~l~~L~~L~Ls~n~-l~~l~-~l~~l~~L~~L~Ls 203 (227)
T d1h6ua2 132 QVLYLDLNQITNI--SPLAGLTNLQYLSIGNAQVSD--LT-P-LANLSKLTTLKADDNK-ISDIS-PLASLPNLIEVHLK 203 (227)
T ss_dssp CEEECCSSCCCCC--GGGGGCTTCCEEECCSSCCCC--CG-G-GTTCTTCCEEECCSSC-CCCCG-GGGGCTTCCEEECT
T ss_pred hhhhchhhhhchh--hhhcccccccccccccccccc--ch-h-hcccccceecccCCCc-cCCCh-hhcCCCCCCEEECc
Confidence 9999988887643 357789999999998877643 22 3 5679999999999986 78775 36679999999999
Q ss_pred CCccccCcchhhccCCcCcEEEcc
Q 045118 161 PCAYLRKLPEELWCIKSLCKLELH 184 (221)
Q Consensus 161 ~~~~l~~~~~~~~~l~~L~~l~l~ 184 (221)
+| .+++++ .++++++|++|+++
T Consensus 204 ~N-~lt~i~-~l~~l~~L~~L~ls 225 (227)
T d1h6ua2 204 NN-QISDVS-PLANTSNLFIVTLT 225 (227)
T ss_dssp TS-CCCBCG-GGTTCTTCCEEEEE
T ss_pred CC-cCCCCc-ccccCCCCCEEEee
Confidence 96 688886 47899999999885
No 20
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.21 E-value=8.6e-12 Score=85.48 Aligned_cols=86 Identities=27% Similarity=0.369 Sum_probs=40.7
Q ss_pred cCCCCCccEEEEEecCCccccchhHhhccCCCCcEEEeeecCceeeehhhccccCcCCCCccEEEeecccCCCCC-chhh
Q 045118 20 LGRLPNVRTFRISGDLSYYHSGVSKSLCKLHKLECLKLVNKGKMWQLSRMILSEYKFPPSLTQLSLSNTELMEDP-MPTL 98 (221)
Q Consensus 20 l~~l~~Lr~L~l~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~L~~Llp~l~~~~~~L~~L~l~~~~~~~~~-~~~l 98 (221)
++++++|++|++++|. ...+|+.+..+++|++|+++++ .++. +|.+..+ ++|++|++++|.+...+ ...+
T Consensus 16 l~~l~~L~~L~ls~N~---l~~lp~~~~~l~~L~~L~l~~N----~i~~-l~~~~~l-~~L~~L~l~~N~i~~~~~~~~l 86 (124)
T d1dcea3 16 LEQLLLVTHLDLSHNR---LRALPPALAALRCLEVLQASDN----ALEN-VDGVANL-PRLQELLLCNNRLQQSAAIQPL 86 (124)
T ss_dssp GGGGTTCCEEECCSSC---CCCCCGGGGGCTTCCEEECCSS----CCCC-CGGGTTC-SSCCEEECCSSCCCSSSTTGGG
T ss_pred cccCCCCCEEECCCCc---cCcchhhhhhhhcccccccccc----cccc-cCccccc-cccCeEECCCCccCCCCCchhh
Confidence 4455555555555553 3344444555555555555543 1122 3444444 55555555555554332 2334
Q ss_pred ccCCCCcEEEecCCcc
Q 045118 99 EKLPHLEVLKLKQNSY 114 (221)
Q Consensus 99 ~~l~~L~~L~l~~~~~ 114 (221)
+.+++|+.|++++|.+
T Consensus 87 ~~~~~L~~L~l~~N~i 102 (124)
T d1dcea3 87 VSCPRLVLLNLQGNSL 102 (124)
T ss_dssp GGCTTCCEEECTTSGG
T ss_pred cCCCCCCEEECCCCcC
Confidence 4455555555554443
No 21
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.20 E-value=6.6e-12 Score=90.12 Aligned_cols=108 Identities=16% Similarity=0.133 Sum_probs=44.6
Q ss_pred CCCCccEEEEEecCCccccchhHhhccCCCCcEEEeeecCceeeehhhccccCcCCCCccEEEeecccCCCCCchhhccC
Q 045118 22 RLPNVRTFRISGDLSYYHSGVSKSLCKLHKLECLKLVNKGKMWQLSRMILSEYKFPPSLTQLSLSNTELMEDPMPTLEKL 101 (221)
Q Consensus 22 ~l~~Lr~L~l~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~L~~Llp~l~~~~~~L~~L~l~~~~~~~~~~~~l~~l 101 (221)
++.++|+|+++++. ...++..+..+++|++|+++++ +++. ++.+..+ ++|+.|++++|.+...+...+..+
T Consensus 16 n~~~lr~L~L~~n~---I~~i~~~~~~l~~L~~L~Ls~N----~i~~-l~~~~~l-~~L~~L~ls~N~i~~l~~~~~~~l 86 (162)
T d1a9na_ 16 NAVRDRELDLRGYK---IPVIENLGATLDQFDAIDFSDN----EIRK-LDGFPLL-RRLKTLLVNNNRICRIGEGLDQAL 86 (162)
T ss_dssp CTTSCEEEECTTSC---CCSCCCGGGGTTCCSEEECCSS----CCCE-ECCCCCC-SSCCEEECCSSCCCEECSCHHHHC
T ss_pred CcCcCcEEECCCCC---CCccCccccccccCCEEECCCC----CCCc-cCCcccC-cchhhhhcccccccCCCccccccc
Confidence 34444555554442 2223333344445555555443 1122 2333444 445555555554443332233344
Q ss_pred CCCcEEEecCCccCCceeeeeCCCCCCcccEEeccccc
Q 045118 102 PHLEVLKLKQNSYLERKLACVGCSSFSQLKILHLKSML 139 (221)
Q Consensus 102 ~~L~~L~l~~~~~~~~~l~~~~~~~~~~L~~L~L~~~~ 139 (221)
++|+.|++++|.+....-... +..+++|+.+++++|+
T Consensus 87 ~~L~~L~L~~N~i~~~~~l~~-l~~l~~L~~L~l~~N~ 123 (162)
T d1a9na_ 87 PDLTELILTNNSLVELGDLDP-LASLKSLTYLCILRNP 123 (162)
T ss_dssp TTCCEEECCSCCCCCGGGGGG-GGGCTTCCEEECCSSG
T ss_pred cccccceeccccccccccccc-cccccccchhhcCCCc
Confidence 455555554444432100011 2334445555554444
No 22
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.16 E-value=5e-11 Score=81.58 Aligned_cols=86 Identities=26% Similarity=0.271 Sum_probs=49.0
Q ss_pred ccccCcCCCCccEEEeecccCCCCCchhhccCCCCcEEEecCCccCCceeeeeCCCCCCcccEEeccccccccceee--C
Q 045118 70 ILSEYKFPPSLTQLSLSNTELMEDPMPTLEKLPHLEVLKLKQNSYLERKLACVGCSSFSQLKILHLKSMLWLEEWTM--G 147 (221)
Q Consensus 70 lp~l~~~~~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~l~~~~~~~~~~L~~L~L~~~~~l~~~~~--~ 147 (221)
++.+..+ ++|++|++++|.+...+ ..++.+++|+.|++++|.+.. ++ . +..+++|+.|+++++. +.+++. .
T Consensus 13 l~~l~~l-~~L~~L~ls~N~l~~lp-~~~~~l~~L~~L~l~~N~i~~--l~-~-~~~l~~L~~L~l~~N~-i~~~~~~~~ 85 (124)
T d1dcea3 13 LCHLEQL-LLVTHLDLSHNRLRALP-PALAALRCLEVLQASDNALEN--VD-G-VANLPRLQELLLCNNR-LQQSAAIQP 85 (124)
T ss_dssp CCCGGGG-TTCCEEECCSSCCCCCC-GGGGGCTTCCEEECCSSCCCC--CG-G-GTTCSSCCEEECCSSC-CCSSSTTGG
T ss_pred CcccccC-CCCCEEECCCCccCcch-hhhhhhhcccccccccccccc--cC-c-cccccccCeEECCCCc-cCCCCCchh
Confidence 3455555 66666666666666543 345666666666666666544 22 2 4456666666666665 444431 2
Q ss_pred CCCCCCccEEEecCC
Q 045118 148 AGAMPKLESLILNPC 162 (221)
Q Consensus 148 ~~~l~~L~~L~l~~~ 162 (221)
++.+++|+.++++++
T Consensus 86 l~~~~~L~~L~l~~N 100 (124)
T d1dcea3 86 LVSCPRLVLLNLQGN 100 (124)
T ss_dssp GGGCTTCCEEECTTS
T ss_pred hcCCCCCCEEECCCC
Confidence 344566666666653
No 23
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.13 E-value=1.3e-10 Score=85.40 Aligned_cols=86 Identities=23% Similarity=0.229 Sum_probs=40.3
Q ss_pred ccCcCCCCccEEEeecccCCCCCchhhccCCCCcEEEecCCccCCceee-eeCCCCCCcccEEeccccccccceee-CCC
Q 045118 72 SEYKFPPSLTQLSLSNTELMEDPMPTLEKLPHLEVLKLKQNSYLERKLA-CVGCSSFSQLKILHLKSMLWLEEWTM-GAG 149 (221)
Q Consensus 72 ~l~~~~~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~l~-~~~~~~~~~L~~L~L~~~~~l~~~~~-~~~ 149 (221)
.+..+ ++|+.|++++|.+...+...+..+++|++|++++|.+.. ++ .. +.++++|++|+|+++. ++.++. .+.
T Consensus 49 ~f~~l-~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~N~l~~--l~~~~-F~~l~~L~~L~L~~N~-l~~i~~~~f~ 123 (192)
T d1w8aa_ 49 LFGRL-PHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKE--ISNKM-FLGLHQLKTLNLYDNQ-ISCVMPGSFE 123 (192)
T ss_dssp SGGGC-TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCE--ECSSS-STTCTTCCEEECCSSC-CCEECTTSST
T ss_pred ccCCC-ceEeeeeccccccccccccccccccccceeeeccccccc--cCHHH-HhCCCcccccccCCcc-ccccCHHHhc
Confidence 33444 555555555555544444444455555555555554432 21 12 3345555555555554 444432 233
Q ss_pred CCCCccEEEecCC
Q 045118 150 AMPKLESLILNPC 162 (221)
Q Consensus 150 ~l~~L~~L~l~~~ 162 (221)
.+++|++++++++
T Consensus 124 ~l~~L~~l~L~~N 136 (192)
T d1w8aa_ 124 HLNSLTSLNLASN 136 (192)
T ss_dssp TCTTCCEEECTTC
T ss_pred CCccccccccccc
Confidence 4455555555543
No 24
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.12 E-value=6.8e-10 Score=84.03 Aligned_cols=112 Identities=18% Similarity=0.150 Sum_probs=65.4
Q ss_pred ccCcCCCCccEEEeecccCCCCCch-hhccCCCCcEEEecCCccCCceeeeeCCCCC-CcccEEeccccccccceeeCCC
Q 045118 72 SEYKFPPSLTQLSLSNTELMEDPMP-TLEKLPHLEVLKLKQNSYLERKLACVGCSSF-SQLKILHLKSMLWLEEWTMGAG 149 (221)
Q Consensus 72 ~l~~~~~~L~~L~l~~~~~~~~~~~-~l~~l~~L~~L~l~~~~~~~~~l~~~~~~~~-~~L~~L~L~~~~~l~~~~~~~~ 149 (221)
.+..+ ++|+++++.+|.+...+.. .+..++.+..+....+.+.. ++...+.++ ..++.+++.++. ++.++....
T Consensus 98 ~~~~l-~~L~~l~l~~~~l~~~~~~~~~~~l~~l~~~~~~n~~l~~--i~~~~~~~~~~~l~~L~l~~n~-l~~i~~~~~ 173 (242)
T d1xwdc1 98 AFQNL-PNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHT--IERNSFVGLSFESVILWLNKNG-IQEIHNCAF 173 (242)
T ss_dssp SEECC-TTCCEEEEESCCCCSCCCCTTTCBSSCEEEEEESCTTCCE--ECTTSSTTSBSSCEEEECCSSC-CCEECTTTT
T ss_pred ccccc-ccccccccchhhhccccccccccccccccccccccccccc--ccccccccccccceeeeccccc-ccccccccc
Confidence 44555 6777777777666543211 22233344433433322221 111101222 366777777666 677765555
Q ss_pred CCCCccEEEecCCccccCcchh-hccCCcCcEEEccCCC
Q 045118 150 AMPKLESLILNPCAYLRKLPEE-LWCIKSLCKLELHWPQ 187 (221)
Q Consensus 150 ~l~~L~~L~l~~~~~l~~~~~~-~~~l~~L~~l~l~~~~ 187 (221)
..++++++....++.++.+|.. +.++++|++|++.++.
T Consensus 174 ~~~~l~~~~~l~~n~l~~l~~~~f~~l~~L~~L~Ls~N~ 212 (242)
T d1xwdc1 174 NGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTR 212 (242)
T ss_dssp TTCCEEEEECTTCTTCCCCCTTTTTTSCCCSEEECTTSC
T ss_pred cchhhhccccccccccccccHHHhcCCCCCCEEECCCCc
Confidence 5677777777666788888764 6889999999998864
No 25
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.11 E-value=9e-11 Score=86.26 Aligned_cols=106 Identities=23% Similarity=0.196 Sum_probs=63.6
Q ss_pred CCccEEEeecccCCC-CCchhhccCCCCcEEEecCCccCCceeeeeCCCCCCcccEEeccccccccceee-CCCCCCCcc
Q 045118 78 PSLTQLSLSNTELME-DPMPTLEKLPHLEVLKLKQNSYLERKLACVGCSSFSQLKILHLKSMLWLEEWTM-GAGAMPKLE 155 (221)
Q Consensus 78 ~~L~~L~l~~~~~~~-~~~~~l~~l~~L~~L~l~~~~~~~~~l~~~~~~~~~~L~~L~L~~~~~l~~~~~-~~~~l~~L~ 155 (221)
+++++|++++|.+.. .+...++.+++|+.|++++|.+... .+.. +..+++|++|+++++. +..++. .+..+++|+
T Consensus 29 ~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~-~~~~-~~~~~~L~~L~Ls~N~-l~~l~~~~F~~l~~L~ 105 (192)
T d1w8aa_ 29 LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGI-EPNA-FEGASHIQELQLGENK-IKEISNKMFLGLHQLK 105 (192)
T ss_dssp TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCB-CTTT-TTTCTTCCEEECCSCC-CCEECSSSSTTCTTCC
T ss_pred CCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccc-cccc-cccccccceeeecccc-ccccCHHHHhCCCccc
Confidence 566777777776653 3334566677777777766665432 1222 4456677777777665 666633 355667777
Q ss_pred EEEecCCccccCcch-hhccCCcCcEEEccCCC
Q 045118 156 SLILNPCAYLRKLPE-ELWCIKSLCKLELHWPQ 187 (221)
Q Consensus 156 ~L~l~~~~~l~~~~~-~~~~l~~L~~l~l~~~~ 187 (221)
+|++++ +.++.+|. .+..+++|+++++.+++
T Consensus 106 ~L~L~~-N~l~~i~~~~f~~l~~L~~l~L~~N~ 137 (192)
T d1w8aa_ 106 TLNLYD-NQISCVMPGSFEHLNSLTSLNLASNP 137 (192)
T ss_dssp EEECCS-SCCCEECTTSSTTCTTCCEEECTTCC
T ss_pred ccccCC-ccccccCHHHhcCCcccccccccccc
Confidence 777776 44555543 35666777777776644
No 26
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.10 E-value=5.9e-13 Score=98.87 Aligned_cols=147 Identities=20% Similarity=0.206 Sum_probs=95.8
Q ss_pred CccEEEEEecCCccccchhHhhccCCCCcEEEeeecCceeeehhhccccCcCCCCccEEEeecccCCCCCchhhccCCCC
Q 045118 25 NVRTFRISGDLSYYHSGVSKSLCKLHKLECLKLVNKGKMWQLSRMILSEYKFPPSLTQLSLSNTELMEDPMPTLEKLPHL 104 (221)
Q Consensus 25 ~Lr~L~l~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~L~~Llp~l~~~~~~L~~L~l~~~~~~~~~~~~l~~l~~L 104 (221)
..+.+++.... .....++.++..+++|++|+++++ .++. ++.+..+ ++|+.|++++|.+...+ .....+++|
T Consensus 24 ~~~~~~l~~~~-~~i~~l~~sl~~L~~L~~L~Ls~n----~I~~-i~~l~~l-~~L~~L~Ls~N~i~~i~-~~~~~~~~L 95 (198)
T d1m9la_ 24 EAEKVELHGMI-PPIEKMDATLSTLKACKHLALSTN----NIEK-ISSLSGM-ENLRILSLGRNLIKKIE-NLDAVADTL 95 (198)
T ss_dssp TCSCEECCBCC-TTCCCCHHHHHHTTTCCEEECSEE----EESC-CCCHHHH-TTCCEEECCEEEECSCS-SHHHHHHHC
T ss_pred ccceeeeeccc-CchhhhhhHHhcccccceeECccc----CCCC-cccccCC-ccccChhhccccccccc-ccccccccc
Confidence 34444444331 124566778888888888888874 3343 4566777 88888888888887654 233445678
Q ss_pred cEEEecCCccCCceeeeeCCCCCCcccEEecccccccccee--eCCCCCCCccEEEecCCccccCcch----------hh
Q 045118 105 EVLKLKQNSYLERKLACVGCSSFSQLKILHLKSMLWLEEWT--MGAGAMPKLESLILNPCAYLRKLPE----------EL 172 (221)
Q Consensus 105 ~~L~l~~~~~~~~~l~~~~~~~~~~L~~L~L~~~~~l~~~~--~~~~~l~~L~~L~l~~~~~l~~~~~----------~~ 172 (221)
+.|++++|.+.. ++ . ...+++|+.|++++|. +++++ ..+..+++|+.|++++|+.....+. .+
T Consensus 96 ~~L~l~~N~i~~--l~-~-~~~l~~L~~L~L~~N~-i~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~r~~vi 170 (198)
T d1m9la_ 96 EELWISYNQIAS--LS-G-IEKLVNLRVLYMSNNK-ITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVV 170 (198)
T ss_dssp CEEECSEEECCC--HH-H-HHHHHHSSEEEESEEE-CCCHHHHHHHTTTTTCSEEEECSSHHHHHHCTTTTHHHHHHHHH
T ss_pred cccccccccccc--cc-c-ccccccccccccccch-hccccccccccCCCccceeecCCCccccCcccccchhhHHHHHH
Confidence 888888777654 32 2 4457788888888876 66554 2356788888888888642221111 25
Q ss_pred ccCCcCcEEEcc
Q 045118 173 WCIKSLCKLELH 184 (221)
Q Consensus 173 ~~l~~L~~l~l~ 184 (221)
..+|+|+.|+-.
T Consensus 171 ~~lp~L~~LD~~ 182 (198)
T d1m9la_ 171 KRLPNLKKLDGM 182 (198)
T ss_dssp HHCSSCCEESSG
T ss_pred HHCCCcCEeCCc
Confidence 678888887644
No 27
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=98.97 E-value=6.4e-12 Score=93.13 Aligned_cols=129 Identities=21% Similarity=0.207 Sum_probs=95.0
Q ss_pred ChhhcCCCCCccEEEEEecCCccccchhHhhccCCCCcEEEeeecCceeeehhhccc-cCcCCCCccEEEeecccCCCCC
Q 045118 16 TPDILGRLPNVRTFRISGDLSYYHSGVSKSLCKLHKLECLKLVNKGKMWQLSRMILS-EYKFPPSLTQLSLSNTELMEDP 94 (221)
Q Consensus 16 ~~~~l~~l~~Lr~L~l~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~L~~Llp~-l~~~~~~L~~L~l~~~~~~~~~ 94 (221)
.+..++.+++|++|+++++. ...++ .+.++++|++|+++++ .+.. +|. ...+ ++|+.|++++|.+...
T Consensus 40 l~~sl~~L~~L~~L~Ls~n~---I~~i~-~l~~l~~L~~L~Ls~N----~i~~-i~~~~~~~-~~L~~L~l~~N~i~~l- 108 (198)
T d1m9la_ 40 MDATLSTLKACKHLALSTNN---IEKIS-SLSGMENLRILSLGRN----LIKK-IENLDAVA-DTLEELWISYNQIASL- 108 (198)
T ss_dssp CHHHHHHTTTCCEEECSEEE---ESCCC-CHHHHTTCCEEECCEE----EECS-CSSHHHHH-HHCCEEECSEEECCCH-
T ss_pred hhhHHhcccccceeECcccC---CCCcc-cccCCccccChhhccc----cccc-cccccccc-cccccccccccccccc-
Confidence 45678889999999999995 34443 5889999999999985 3344 453 3334 7899999999998753
Q ss_pred chhhccCCCCcEEEecCCccCCceeeeeCCCCCCcccEEeccccccccceeeC-----------CCCCCCccEEE
Q 045118 95 MPTLEKLPHLEVLKLKQNSYLERKLACVGCSSFSQLKILHLKSMLWLEEWTMG-----------AGAMPKLESLI 158 (221)
Q Consensus 95 ~~~l~~l~~L~~L~l~~~~~~~~~l~~~~~~~~~~L~~L~L~~~~~l~~~~~~-----------~~~l~~L~~L~ 158 (221)
+.+..+++|+.|++++|.+....-... +..+++|+.|++++|+ +...+.. ...+|+|+.|+
T Consensus 109 -~~~~~l~~L~~L~L~~N~i~~~~~~~~-l~~l~~L~~L~L~~N~-l~~~~~~~~~~~~~r~~vi~~lp~L~~LD 180 (198)
T d1m9la_ 109 -SGIEKLVNLRVLYMSNNKITNWGEIDK-LAALDKLEDLLLAGNP-LYNDYKENNATSEYRIEVVKRLPNLKKLD 180 (198)
T ss_dssp -HHHHHHHHSSEEEESEEECCCHHHHHH-HTTTTTCSEEEECSSH-HHHHHCTTTTHHHHHHHHHHHCSSCCEES
T ss_pred -ccccccccccccccccchhcccccccc-ccCCCccceeecCCCc-cccCcccccchhhHHHHHHHHCCCcCEeC
Confidence 568889999999999988765211123 5679999999999987 4433222 23477887776
No 28
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.92 E-value=3.6e-09 Score=79.93 Aligned_cols=177 Identities=16% Similarity=0.079 Sum_probs=102.5
Q ss_pred CcceeceecCCCC-Ch-hhcCCCCCccEEEEEecCCccccchh-HhhccCCCCcEEEeeec--C-----cee----eehh
Q 045118 3 NLIFISALHPSSC-TP-DILGRLPNVRTFRISGDLSYYHSGVS-KSLCKLHKLECLKLVNK--G-----KMW----QLSR 68 (221)
Q Consensus 3 ~L~~L~~~~~~~~-~~-~~l~~l~~Lr~L~l~~~~~~~~~~~~-~~l~~l~~L~~L~l~~~--~-----~~~----~L~~ 68 (221)
++++|........ ++ ..+.++++|++|+++++. ....++ ..+.++++++++.+... - ..+ +|+.
T Consensus 30 ~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~--~~~~i~~~~f~~l~~l~~l~~~~~n~l~~~~~~~~~~l~~L~~ 107 (242)
T d1xwdc1 30 NAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQND--VLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQY 107 (242)
T ss_dssp CCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCT--TCCEECSSSEESCTTCCEEEEECCTTCCEECTTSEECCTTCCE
T ss_pred CCCEEECcCCcCCccChhHhhccchhhhhhhcccc--ccceeeccccccccccccccccccccccccccccccccccccc
Confidence 5677764443333 33 457889999999999885 323222 34566666666665431 0 101 2222
Q ss_pred h---------ccccCcC--CCCccEEEeecccCCCCCchhhccC-CCCcEEEecCCccCCceeeeeCCCCCCcccEEecc
Q 045118 69 M---------ILSEYKF--PPSLTQLSLSNTELMEDPMPTLEKL-PHLEVLKLKQNSYLERKLACVGCSSFSQLKILHLK 136 (221)
Q Consensus 69 L---------lp~l~~~--~~~L~~L~l~~~~~~~~~~~~l~~l-~~L~~L~l~~~~~~~~~l~~~~~~~~~~L~~L~L~ 136 (221)
+ .+....+ ...+..+...++.+...+...+..+ ..+..|++++|.+.. ++.. ....++++.+...
T Consensus 108 l~l~~~~l~~~~~~~~~~~l~~l~~~~~~n~~l~~i~~~~~~~~~~~l~~L~l~~n~l~~--i~~~-~~~~~~l~~~~~l 184 (242)
T d1xwdc1 108 LLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQE--IHNC-AFNGTQLDELNLS 184 (242)
T ss_dssp EEEESCCCCSCCCCTTTCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCE--ECTT-TTTTCCEEEEECT
T ss_pred cccchhhhcccccccccccccccccccccccccccccccccccccccceeeecccccccc--cccc-cccchhhhccccc
Confidence 2 2322233 0444444445555554444455554 478889998777653 3333 3344566666544
Q ss_pred ccccccceeeC-CCCCCCccEEEecCCccccCcch-hhccCCcCcEEEccC
Q 045118 137 SMLWLEEWTMG-AGAMPKLESLILNPCAYLRKLPE-ELWCIKSLCKLELHW 185 (221)
Q Consensus 137 ~~~~l~~~~~~-~~~l~~L~~L~l~~~~~l~~~~~-~~~~l~~L~~l~l~~ 185 (221)
.+..+++++.. +..+++|+.|++++ +.++.+|. .+.+++.|+.+++..
T Consensus 185 ~~n~l~~l~~~~f~~l~~L~~L~Ls~-N~l~~l~~~~~~~l~~L~~l~~~~ 234 (242)
T d1xwdc1 185 DNNNLEELPNDVFHGASGPVILDISR-TRIHSLPSYGLENLKKLRARSTYN 234 (242)
T ss_dssp TCTTCCCCCTTTTTTSCCCSEEECTT-SCCCCCCSSSCTTCCEEESSSEES
T ss_pred cccccccccHHHhcCCCCCCEEECCC-CcCCccCHHHHcCCcccccCcCCC
Confidence 44448888654 57799999999998 45778865 356666666665543
No 29
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.77 E-value=8.7e-09 Score=72.93 Aligned_cols=103 Identities=18% Similarity=0.101 Sum_probs=64.3
Q ss_pred ccEEEEEecCCccccchhHhhccCCCCcEEEeeecCceeeehhhcc--ccCcCCCCccEEEeecccCCCCCchhhccCCC
Q 045118 26 VRTFRISGDLSYYHSGVSKSLCKLHKLECLKLVNKGKMWQLSRMIL--SEYKFPPSLTQLSLSNTELMEDPMPTLEKLPH 103 (221)
Q Consensus 26 Lr~L~l~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~L~~Llp--~l~~~~~~L~~L~l~~~~~~~~~~~~l~~l~~ 103 (221)
...++.++. .....|..+.++++|++|+++++. .++. ++ .+..+ ++|+.|++++|++...+..++..+++
T Consensus 10 ~~~l~c~~~---~~~~~p~~l~~l~~l~~L~l~~n~---~l~~-i~~~~f~~l-~~L~~L~Ls~N~l~~i~~~~f~~l~~ 81 (156)
T d2ifga3 10 SSGLRCTRD---GALDSLHHLPGAENLTELYIENQQ---HLQH-LELRDLRGL-GELRNLTIVKSGLRFVAPDAFHFTPR 81 (156)
T ss_dssp SSCEECCSS---CCCTTTTTSCSCSCCSEEECCSCS---SCCE-ECGGGSCSC-CCCSEEECCSSCCCEECTTGGGSCSC
T ss_pred CCeEEecCC---CCccCcccccCccccCeeecCCCc---cccc-cCchhhccc-cccCcceeeccccCCccccccccccc
Confidence 344444444 234456666777777777776421 1233 33 56777 78888888888877766667777888
Q ss_pred CcEEEecCCccCCceeeeeCCCCCCcccEEeccccc
Q 045118 104 LEVLKLKQNSYLERKLACVGCSSFSQLKILHLKSML 139 (221)
Q Consensus 104 L~~L~l~~~~~~~~~l~~~~~~~~~~L~~L~L~~~~ 139 (221)
|++|++++|.+.. ++.. .....+|+.|++++++
T Consensus 82 L~~L~Ls~N~l~~--l~~~-~~~~~~l~~L~L~~Np 114 (156)
T d2ifga3 82 LSRLNLSFNALES--LSWK-TVQGLSLQELVLSGNP 114 (156)
T ss_dssp CCEEECCSSCCSC--CCST-TTCSCCCCEEECCSSC
T ss_pred ccceeccCCCCcc--cChh-hhccccccccccCCCc
Confidence 8888887777654 3332 2233457777777665
No 30
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.70 E-value=4.1e-08 Score=69.32 Aligned_cols=105 Identities=17% Similarity=0.069 Sum_probs=66.1
Q ss_pred CCccEEEeecccCCCCCchhhccCCCCcEEEecCCc-cCCceeeeeCCCCCCcccEEecccccccccee-eCCCCCCCcc
Q 045118 78 PSLTQLSLSNTELMEDPMPTLEKLPHLEVLKLKQNS-YLERKLACVGCSSFSQLKILHLKSMLWLEEWT-MGAGAMPKLE 155 (221)
Q Consensus 78 ~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~~~-~~~~~l~~~~~~~~~~L~~L~L~~~~~l~~~~-~~~~~l~~L~ 155 (221)
...+.++..++.+...+ ..+..+++|++|+++++. +.. ++...+.++++|+.|+++++. ++.++ .++..+++|+
T Consensus 8 ~~~~~l~c~~~~~~~~p-~~l~~l~~l~~L~l~~n~~l~~--i~~~~f~~l~~L~~L~Ls~N~-l~~i~~~~f~~l~~L~ 83 (156)
T d2ifga3 8 HGSSGLRCTRDGALDSL-HHLPGAENLTELYIENQQHLQH--LELRDLRGLGELRNLTIVKSG-LRFVAPDAFHFTPRLS 83 (156)
T ss_dssp SSSSCEECCSSCCCTTT-TTSCSCSCCSEEECCSCSSCCE--ECGGGSCSCCCCSEEECCSSC-CCEECTTGGGSCSCCC
T ss_pred CCCCeEEecCCCCccCc-ccccCccccCeeecCCCccccc--cCchhhccccccCcceeeccc-cCCccccccccccccc
Confidence 33455666665555433 456667777777775554 332 222115567778888887776 77663 3356677888
Q ss_pred EEEecCCccccCcchhhccCCcCcEEEccCCC
Q 045118 156 SLILNPCAYLRKLPEELWCIKSLCKLELHWPQ 187 (221)
Q Consensus 156 ~L~l~~~~~l~~~~~~~~~l~~L~~l~l~~~~ 187 (221)
+|++++ +.++.+|.++....+|++|++.+++
T Consensus 84 ~L~Ls~-N~l~~l~~~~~~~~~l~~L~L~~Np 114 (156)
T d2ifga3 84 RLNLSF-NALESLSWKTVQGLSLQELVLSGNP 114 (156)
T ss_dssp EEECCS-SCCSCCCSTTTCSCCCCEEECCSSC
T ss_pred ceeccC-CCCcccChhhhccccccccccCCCc
Confidence 888887 5566776665555567888887765
No 31
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=98.47 E-value=6.8e-07 Score=70.12 Aligned_cols=53 Identities=26% Similarity=0.300 Sum_probs=42.6
Q ss_pred CCcccEEeccccccccceeeCCCCCCCccEEEecCCccccCcchhhccCCcCcEEEccCCC
Q 045118 127 FSQLKILHLKSMLWLEEWTMGAGAMPKLESLILNPCAYLRKLPEELWCIKSLCKLELHWPQ 187 (221)
Q Consensus 127 ~~~L~~L~L~~~~~l~~~~~~~~~l~~L~~L~l~~~~~l~~~~~~~~~l~~L~~l~l~~~~ 187 (221)
+++|++|++++|. ++.++. .+++|++|++++| .++++|.. +++|++|++.+++
T Consensus 283 ~~~L~~L~Ls~N~-l~~lp~---~~~~L~~L~L~~N-~L~~l~~~---~~~L~~L~L~~N~ 335 (353)
T d1jl5a_ 283 PPSLEELNVSNNK-LIELPA---LPPRLERLIASFN-HLAEVPEL---PQNLKQLHVEYNP 335 (353)
T ss_dssp CTTCCEEECCSSC-CSCCCC---CCTTCCEEECCSS-CCSCCCCC---CTTCCEEECCSSC
T ss_pred CCCCCEEECCCCc-cCcccc---ccCCCCEEECCCC-cCCccccc---cCCCCEEECcCCc
Confidence 5789999999987 777763 3789999999884 57788753 5678999999876
No 32
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=98.29 E-value=7.3e-06 Score=63.99 Aligned_cols=77 Identities=22% Similarity=0.344 Sum_probs=45.7
Q ss_pred CCCccEEEEEecCCccccchhHhhccCCCCcEEEeeecCceeeehhhccccCcCCCCccEEEeecccCCCCCchhhccCC
Q 045118 23 LPNVRTFRISGDLSYYHSGVSKSLCKLHKLECLKLVNKGKMWQLSRMILSEYKFPPSLTQLSLSNTELMEDPMPTLEKLP 102 (221)
Q Consensus 23 l~~Lr~L~l~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~L~~Llp~l~~~~~~L~~L~l~~~~~~~~~~~~l~~l~ 102 (221)
.++|++|+++++. ...+|+. ..+|++|++.++. +..+..+|+.|++|++++|.+...+ ..+.++
T Consensus 57 ~~~L~~L~Ls~N~---l~~lp~~---~~~L~~L~l~~n~--------l~~l~~lp~~L~~L~L~~n~l~~lp--~~~~l~ 120 (353)
T d1jl5a_ 57 PPHLESLVASCNS---LTELPEL---PQSLKSLLVDNNN--------LKALSDLPPLLEYLGVSNNQLEKLP--ELQNSS 120 (353)
T ss_dssp CTTCSEEECCSSC---CSSCCCC---CTTCCEEECCSSC--------CSCCCSCCTTCCEEECCSSCCSSCC--CCTTCT
T ss_pred CCCCCEEECCCCC---Ccccccc---hhhhhhhhhhhcc--------cchhhhhcccccccccccccccccc--chhhhc
Confidence 3566677766663 3344533 3456666666520 1233444466788888887776543 356677
Q ss_pred CCcEEEecCCccC
Q 045118 103 HLEVLKLKQNSYL 115 (221)
Q Consensus 103 ~L~~L~l~~~~~~ 115 (221)
+|+.|+++++...
T Consensus 121 ~L~~L~l~~~~~~ 133 (353)
T d1jl5a_ 121 FLKIIDVDNNSLK 133 (353)
T ss_dssp TCCEEECCSSCCS
T ss_pred cceeecccccccc
Confidence 8888887666543
No 33
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=98.28 E-value=1.6e-07 Score=74.35 Aligned_cols=42 Identities=29% Similarity=0.273 Sum_probs=26.4
Q ss_pred hhcCCCCCccEEEEEecCC--ccccchhHhhccCCCCcEEEeee
Q 045118 18 DILGRLPNVRTFRISGDLS--YYHSGVSKSLCKLHKLECLKLVN 59 (221)
Q Consensus 18 ~~l~~l~~Lr~L~l~~~~~--~~~~~~~~~l~~l~~L~~L~l~~ 59 (221)
..+..+++|++|+++.+.. .....+...+...++|++|++++
T Consensus 87 ~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~ 130 (344)
T d2ca6a1 87 QALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHN 130 (344)
T ss_dssp HHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCS
T ss_pred HHHhhCCCcccccccccccccccccchhhhhcccccchheeccc
Confidence 4455677777777777641 12234555666677788887765
No 34
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=98.22 E-value=1.8e-07 Score=74.04 Aligned_cols=41 Identities=15% Similarity=0.100 Sum_probs=23.0
Q ss_pred hcCCCCCccEEEEEecCCc--------cccchhHhhccCCCCcEEEeee
Q 045118 19 ILGRLPNVRTFRISGDLSY--------YHSGVSKSLCKLHKLECLKLVN 59 (221)
Q Consensus 19 ~l~~l~~Lr~L~l~~~~~~--------~~~~~~~~l~~l~~L~~L~l~~ 59 (221)
.+...++|+.+.++.+... ....+...+...++|++|++++
T Consensus 54 ~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~~ 102 (344)
T d2ca6a1 54 NIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSD 102 (344)
T ss_dssp TTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCS
T ss_pred HHHhCCCCCEEECCCCcccccccccchHHHHHHHHHhhCCCcccccccc
Confidence 3556677777777654310 0112334455667777777765
No 35
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.62 E-value=8.2e-06 Score=65.84 Aligned_cols=113 Identities=19% Similarity=0.125 Sum_probs=72.1
Q ss_pred CcceeceecCCCC---ChhhcCCCCCccEEEEEecCC--ccccchhHhhccCCCCcEEEeeecCcee-eehhhcc-ccCc
Q 045118 3 NLIFISALHPSSC---TPDILGRLPNVRTFRISGDLS--YYHSGVSKSLCKLHKLECLKLVNKGKMW-QLSRMIL-SEYK 75 (221)
Q Consensus 3 ~L~~L~~~~~~~~---~~~~l~~l~~Lr~L~l~~~~~--~~~~~~~~~l~~l~~L~~L~l~~~~~~~-~L~~Llp-~l~~ 75 (221)
+|++|++-+.... +...+..++++|.|++++|.- .....+...+...++|++|+++++.-.- .++. +. .+..
T Consensus 3 ~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~-l~~~l~~ 81 (460)
T d1z7xw1 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHC-VLQGLQT 81 (460)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHH-HHHTTCS
T ss_pred CCCEEEeeCCcCChHHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHH-HHHHHhc
Confidence 5677774333222 344466788999999999861 1224566778889999999998741000 0011 11 3332
Q ss_pred CCCCccEEEeecccCCCCCc----hhhccCCCCcEEEecCCccCC
Q 045118 76 FPPSLTQLSLSNTELMEDPM----PTLEKLPHLEVLKLKQNSYLE 116 (221)
Q Consensus 76 ~~~~L~~L~l~~~~~~~~~~----~~l~~l~~L~~L~l~~~~~~~ 116 (221)
-..+|++|++++|.++.... ..+..+++|++|++++|.+..
T Consensus 82 ~~~~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N~i~~ 126 (460)
T d1z7xw1 82 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGD 126 (460)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHH
T ss_pred CCCCCCEEECCCCCccccccccccchhhccccccccccccccchh
Confidence 22579999999998875442 245678899999998887653
No 36
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.49 E-value=9.5e-07 Score=62.44 Aligned_cols=81 Identities=26% Similarity=0.238 Sum_probs=47.6
Q ss_pred CcCCCCccEEEeecccCCCCC--chhhccCCCCcEEEecCCccCCceeeeeCCCCCCcccEEecccccccccee------
Q 045118 74 YKFPPSLTQLSLSNTELMEDP--MPTLEKLPHLEVLKLKQNSYLERKLACVGCSSFSQLKILHLKSMLWLEEWT------ 145 (221)
Q Consensus 74 ~~~~~~L~~L~l~~~~~~~~~--~~~l~~l~~L~~L~l~~~~~~~~~l~~~~~~~~~~L~~L~L~~~~~l~~~~------ 145 (221)
..+ ++|+.|++++|+++... ...++.+++|+.|++++|.+....-... . ...+|+.+++.+++ +....
T Consensus 62 ~~~-~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~l~~-l-~~~~L~~L~L~~Np-l~~~~~~~~~y 137 (162)
T d1koha1 62 ENI-PELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDK-I-KGLKLEELWLDGNS-LSDTFRDQSTY 137 (162)
T ss_dssp HHC-TTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCCGGGHHH-H-TTCCCSSCCCTTST-TSSSSSSHHHH
T ss_pred HhC-CCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccccchhhhh-h-hccccceeecCCCC-cCcCcccchhH
Confidence 345 77788888888776543 1345567788888887777654211111 2 34467777777776 33221
Q ss_pred --eCCCCCCCccEEE
Q 045118 146 --MGAGAMPKLESLI 158 (221)
Q Consensus 146 --~~~~~l~~L~~L~ 158 (221)
.....+|+|+.|+
T Consensus 138 ~~~i~~~~P~L~~LD 152 (162)
T d1koha1 138 ISAIRERFPKLLRLD 152 (162)
T ss_dssp HHHHHTTSTTCCEET
T ss_pred HHHHHHHCCCCCEEC
Confidence 1134577777665
No 37
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.48 E-value=2.5e-05 Score=62.91 Aligned_cols=15 Identities=13% Similarity=0.310 Sum_probs=7.3
Q ss_pred cCCCCCccEEEEEec
Q 045118 20 LGRLPNVRTFRISGD 34 (221)
Q Consensus 20 l~~l~~Lr~L~l~~~ 34 (221)
+..+++|++|+++++
T Consensus 51 L~~~~~L~~LdLs~N 65 (460)
T d1z7xw1 51 LRVNPALAELNLRSN 65 (460)
T ss_dssp HHTCTTCCEEECTTC
T ss_pred HhcCCCCCEEECcCC
Confidence 344455555555444
No 38
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.21 E-value=1.8e-05 Score=55.59 Aligned_cols=82 Identities=23% Similarity=0.222 Sum_probs=41.3
Q ss_pred ccCCCCcEEEecCCccCCc-eeeeeCCCCCCcccEEeccccccccceee-CCCCCCCccEEEecCCccccCcc-------
Q 045118 99 EKLPHLEVLKLKQNSYLER-KLACVGCSSFSQLKILHLKSMLWLEEWTM-GAGAMPKLESLILNPCAYLRKLP------- 169 (221)
Q Consensus 99 ~~l~~L~~L~l~~~~~~~~-~l~~~~~~~~~~L~~L~L~~~~~l~~~~~-~~~~l~~L~~L~l~~~~~l~~~~------- 169 (221)
..+++|++|++++|.+..- .++.. ...+++|+.|+++++. +++++. .......|+.+++.+++-.....
T Consensus 62 ~~~~~L~~L~Ls~N~i~~l~~~~~~-~~~l~~L~~L~Ls~N~-i~~l~~l~~l~~~~L~~L~L~~Npl~~~~~~~~~y~~ 139 (162)
T d1koha1 62 ENIPELLSLNLSNNRLYRLDDMSSI-VQKAPNLKILNLSGNE-LKSERELDKIKGLKLEELWLDGNSLSDTFRDQSTYIS 139 (162)
T ss_dssp HHCTTCCCCCCCSSCCCCCSGGGTH-HHHSTTCCCCCCTTSC-CCCGGGHHHHTTCCCSSCCCTTSTTSSSSSSHHHHHH
T ss_pred HhCCCCCEeeCCCccccCCchhHHH-HhhCCcccccccccCc-cccchhhhhhhccccceeecCCCCcCcCcccchhHHH
Confidence 3566677777766665431 11222 2345666666666665 554432 11223456666666654322221
Q ss_pred hhhccCCcCcEEE
Q 045118 170 EELWCIKSLCKLE 182 (221)
Q Consensus 170 ~~~~~l~~L~~l~ 182 (221)
..+..+|+|+.|+
T Consensus 140 ~i~~~~P~L~~LD 152 (162)
T d1koha1 140 AIRERFPKLLRLD 152 (162)
T ss_dssp HHHTTSTTCCEET
T ss_pred HHHHHCCCCCEEC
Confidence 1245566666654
No 39
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=96.75 E-value=0.00017 Score=50.66 Aligned_cols=11 Identities=9% Similarity=-0.130 Sum_probs=6.1
Q ss_pred CCCccEEEecC
Q 045118 151 MPKLESLILNP 161 (221)
Q Consensus 151 l~~L~~L~l~~ 161 (221)
-+.|++|++.+
T Consensus 130 n~sL~~l~l~~ 140 (167)
T d1pgva_ 130 NESLLRVGISF 140 (167)
T ss_dssp CSSCCEEECCC
T ss_pred CCCccEeeCcC
Confidence 35566666554
No 40
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=96.07 E-value=0.0047 Score=42.85 Aligned_cols=116 Identities=11% Similarity=0.054 Sum_probs=71.6
Q ss_pred CCCCCccEEEEEecCC---ccccchhHhhccCCCCcEEEeeecCcee-eehhhccccCcCCCCccEEEeecccCCCCCch
Q 045118 21 GRLPNVRTFRISGDLS---YYHSGVSKSLCKLHKLECLKLVNKGKMW-QLSRMILSEYKFPPSLTQLSLSNTELMEDPMP 96 (221)
Q Consensus 21 ~~l~~Lr~L~l~~~~~---~~~~~~~~~l~~l~~L~~L~l~~~~~~~-~L~~Llp~l~~~~~~L~~L~l~~~~~~~~~~~ 96 (221)
.+.+.|++|+++++.. .....+...+...++|++|+++++.-.- ....+...+... +.|++|++++|.+...+..
T Consensus 12 ~n~~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n-~~L~~L~L~~n~i~~~g~~ 90 (167)
T d1pgva_ 12 EDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETS-PSLRVLNVESNFLTPELLA 90 (167)
T ss_dssp TTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHC-SSCCEEECCSSBCCHHHHH
T ss_pred hCCCCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhc-ccccceeeehhhcchHHHH
Confidence 4568899999986431 1233455677788999999998731100 001101144555 8899999999988754332
Q ss_pred ----hhccCCCCcEEEecCCccCCc------eeeeeCCCCCCcccEEecccc
Q 045118 97 ----TLEKLPHLEVLKLKQNSYLER------KLACVGCSSFSQLKILHLKSM 138 (221)
Q Consensus 97 ----~l~~l~~L~~L~l~~~~~~~~------~l~~~~~~~~~~L~~L~L~~~ 138 (221)
++..-+.|++|++++|....- .+... +..-+.|+.|+++.+
T Consensus 91 ~l~~aL~~n~sL~~L~l~~n~~~~~g~~~~~~l~~~-L~~n~sL~~l~l~~~ 141 (167)
T d1pgva_ 91 RLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMA-IEENESLLRVGISFA 141 (167)
T ss_dssp HHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHH-HHHCSSCCEEECCCC
T ss_pred HHHHHHHhCCcCCEEECCCCcCCCccHHHHHHHHHH-HHhCCCccEeeCcCC
Confidence 455668899999987754321 01112 223567888887654
No 41
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=95.72 E-value=0.00092 Score=46.49 Aligned_cols=69 Identities=16% Similarity=0.025 Sum_probs=33.7
Q ss_pred hhccCCCCcEEEeeecCce-e-eehhhccccCcCCCCccEEEeecccCCCCCch----hhccCCCCcEEEecCCcc
Q 045118 45 SLCKLHKLECLKLVNKGKM-W-QLSRMILSEYKFPPSLTQLSLSNTELMEDPMP----TLEKLPHLEVLKLKQNSY 114 (221)
Q Consensus 45 ~l~~l~~L~~L~l~~~~~~-~-~L~~Llp~l~~~~~~L~~L~l~~~~~~~~~~~----~l~~l~~L~~L~l~~~~~ 114 (221)
...+.++|++|++++.... . .+..+...+... ++|++|++++|.+...... .+...+.++.++++.+.+
T Consensus 12 ~~~~~~~L~~L~L~~~~~i~~~~~~~l~~al~~n-~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~ 86 (166)
T d1io0a_ 12 IQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTN-TYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFI 86 (166)
T ss_dssp HHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTC-CSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCC
T ss_pred HHhcCCCCcEEEcCCCCCCCHHHHHHHHHHHhcC-CccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccc
Confidence 3345577777777641000 0 111112244455 6677777777765533222 233455666666655443
No 42
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=94.72 E-value=0.0039 Score=43.13 Aligned_cols=90 Identities=9% Similarity=0.035 Sum_probs=56.9
Q ss_pred cCCCCCccEEEEEecC---CccccchhHhhccCCCCcEEEeeecCcee-eehhhccccCcCCCCccEEEeecccCCCCCc
Q 045118 20 LGRLPNVRTFRISGDL---SYYHSGVSKSLCKLHKLECLKLVNKGKMW-QLSRMILSEYKFPPSLTQLSLSNTELMEDPM 95 (221)
Q Consensus 20 l~~l~~Lr~L~l~~~~---~~~~~~~~~~l~~l~~L~~L~l~~~~~~~-~L~~Llp~l~~~~~~L~~L~l~~~~~~~~~~ 95 (221)
..+.+.|++|++++.. ......+...+...++|++|+++++.-.- .+..+...+... ++++.+++++|.+.....
T Consensus 13 ~~~~~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~-~~l~~l~l~~~~~~~~g~ 91 (166)
T d1io0a_ 13 QNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVN-NTLKSLNVESNFISGSGI 91 (166)
T ss_dssp HTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHC-SSCCEEECCSSCCCHHHH
T ss_pred HhcCCCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhc-ccchhhhhccccccchhH
Confidence 4567899999998643 12234466777888999999998741000 111111244555 789999999988764332
Q ss_pred ----hhhccCCCCcEEEec
Q 045118 96 ----PTLEKLPHLEVLKLK 110 (221)
Q Consensus 96 ----~~l~~l~~L~~L~l~ 110 (221)
..+...++|+.+++.
T Consensus 92 ~~l~~~l~~~~~L~~l~L~ 110 (166)
T d1io0a_ 92 LALVEALQSNTSLIELRID 110 (166)
T ss_dssp HHHHHGGGGCSSCCEEECC
T ss_pred HHHHHHHHhCccccEEeec
Confidence 345566778777664
Done!