Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>045121
MDWSCALCQVSTTSKRDLDEHLHGKKHKARKKDYLEMRRCATRKWTVVKMSILNGANWSS
EDVHYLIFNNVKAAHYSSSLVKPRQQKNVGGEEDSENKNEELPKKKALNTITQKTTNGIP
TGGTMRRKLPLRENFEFWCEVFQVGTHSAVVMEGHKRGKKHMARSNGSRKNNEAVPLTTP
TTIVTPSEPTENVEDEDAVAQE

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  045121
        (202 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2061486 - symbol:AT2G24030 species:3702 "Arabi...   112  0.00032   1


>TAIR|locus:2061486 [details] [associations]
            symbol:AT2G24030 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005622
            "intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
            [GO:0008150 "biological_process" evidence=ND] [GO:0008270 "zinc ion
            binding" evidence=IEA] InterPro:IPR003604 InterPro:IPR015880
            SMART:SM00355 SMART:SM00451 EMBL:CP002685 GO:GO:0008270
            GO:GO:0003676 GO:GO:0005622 EMBL:BT026136 IPI:IPI00534613
            RefSeq:NP_179981.2 UniGene:At.39211 UniGene:At.68928
            ProteinModelPortal:Q147F7 SMR:Q147F7 IntAct:Q147F7
            EnsemblPlants:AT2G24030.1 GeneID:816937 KEGG:ath:AT2G24030
            TAIR:At2g24030 HOGENOM:HOG000121766 InParanoid:Q147F7 OMA:CEICKVG
            ProtClustDB:CLSN2681164 Genevestigator:Q147F7 Uniprot:Q147F7
        Length = 455

 Score = 112 (44.5 bits), Expect = 0.00032, P = 0.00032
 Identities = 29/92 (31%), Positives = 47/92 (51%)

Query:    90 GGEEDSENKNEELPKK--KALNTITQKTTNG-IPTGGTM----RRKLPLRENFEFWCEVF 142
             G  ED + K  +  +   KA++  T +  +  +P  G +    + +  LR N +FWCE+ 
Sbjct:   240 GLNEDLQVKRPKAKESEAKAMSLETGEIVSSKVPCSGKLGSGKKAEGKLRTNQKFWCEIC 299

Query:   143 QVGTHSAVVMEGHKRGKKHMARSNGSRKNNEA 174
             +VGT+  +VM  H+ GKKH A      +  EA
Sbjct:   300 KVGTYCQIVMRDHELGKKHKAAVTQQNETPEA 331

 Score = 88 (36.0 bits), Expect = 0.00082, Sum P(2) = 0.00082
 Identities = 23/68 (33%), Positives = 33/68 (48%)

Query:    96 ENKNEELPKKKALNTITQKTTNGIPTGGTMRRKLPLRENFEFWCEVFQVGTHSAVVMEGH 155
             EN N   P+ + ++ I  K T G  T G  ++K  +      WC+   + T+S   M  H
Sbjct:   353 ENAN---PQGQKVDEIAAKETTGKKTKGEKKKKETV------WCKTCNIQTNSEQTMRNH 403

Query:   156 KRGKKHMA 163
               GKKHMA
Sbjct:   404 TLGKKHMA 411

 Score = 60 (26.2 bits), Expect = 0.00082, Sum P(2) = 0.00082
 Identities = 12/27 (44%), Positives = 17/27 (62%)

Query:     3 WSCALCQVSTTSKRDLDEHLHGKKHKA 29
             W C +C+V T  +  + +H  GKKHKA
Sbjct:   295 W-CEICKVGTYCQIVMRDHELGKKHKA 320


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.312   0.126   0.374    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      202       187   0.00085  110 3  11 23  0.37    33
                                                     31  0.41    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  614 (65 KB)
  Total size of DFA:  182 KB (2104 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  19.71u 0.13s 19.84t   Elapsed:  00:00:01
  Total cpu time:  19.71u 0.13s 19.84t   Elapsed:  00:00:01
  Start:  Sat May 11 02:15:56 2013   End:  Sat May 11 02:15:57 2013

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