BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045125
(342 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q69QB8|CCD31_ORYSJ Cyclin-D3-1 OS=Oryza sativa subsp. japonica GN=CYCD3-1 PE=2 SV=2
Length = 342
Score = 278 bits (711), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 160/347 (46%), Positives = 227/347 (65%), Gaps = 28/347 (8%)
Query: 1 MAPSFDCVVSSLLCAEEDSSVFDDINGSVVDEFENDATWHHGNNRTQHRSRRFDDGGDML 60
MAPSFD S LLCAE+++++ D + E + +W G + + GD+
Sbjct: 1 MAPSFDFAASILLCAEDNTAILD------LGEESEEISWVVGVDASL---------GDLS 45
Query: 61 LSLPLQSDECL-ALLLEKECHHLPHNDYLKRL--RTGDLDLAA-RQEAVDWIAKVHSHFG 116
+ PLQSD+C+ ALL +E H+P YL+RL + LDL A R +A+DWI KVH +
Sbjct: 46 MDFPLQSDDCIEALLGREEQQHIPMEGYLQRLLLQPDGLDLVAVRSDAIDWIWKVHELYK 105
Query: 117 FGPLCSYLTINYLDRFLSAYELPKGKVWMMQLLAVACLSLAAKMEETEVPLCLDLQVGQS 176
FGPL + L++NYLDRFLS ++LP+ + M QLLAVA LSLAAKMEET VP LDLQV +
Sbjct: 106 FGPLTAVLSVNYLDRFLSVFDLPQEEACMTQLLAVASLSLAAKMEETVVPHPLDLQVCDA 165
Query: 177 KFLFEAKTIQRMELLVLSTLKWRMQAITPFSFLDYFTRKITDDDDDHHQTPLRALFCRSI 236
K++FE +TI+RMEL VL+ LKWRMQA+T SF+DY+ K DDD TP + RS+
Sbjct: 166 KYVFETRTIKRMELAVLNALKWRMQAVTACSFIDYYLHKFNDDD-----TPSTSALSRSV 220
Query: 237 QIITSSIKGIDFLEFKPSEIAAAVAISVTGETKTVVDTEKAISLLTQHVKKERVLKCIKM 296
+I S+ K +FL F+PSEIAA+VA+ E +T + ++ +++KKERVL+C +M
Sbjct: 221 DLILSTCKVAEFLVFRPSEIAASVALVALEEHET--SMFERVATCYKNLKKERVLRCYEM 278
Query: 297 MNDSLISGSVKSATSASLATSFPQSPIGVLD-AACLSYKSDESTVGS 342
+ D +I ++ ++ S+ S P+SPIGVLD AAC+S +S+++ VGS
Sbjct: 279 IQDKIIMRNIMRQSAGSV-FSIPKSPIGVLDAAACISQQSEDTFVGS 324
>sp|Q6YXH8|CCD41_ORYSJ Cyclin-D4-1 OS=Oryza sativa subsp. japonica GN=CYCD4-1 PE=2 SV=2
Length = 356
Score = 274 bits (701), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 165/345 (47%), Positives = 213/345 (61%), Gaps = 25/345 (7%)
Query: 4 SFDCVVSSLLCAEEDSSVFDDINGSVVDEFENDATWHHGNNRTQHRSRRFDDGGDMLLSL 63
S++ S LLCAE+ SSV G +E E+ D G +
Sbjct: 6 SYEMAASILLCAEDSSSVLG-FGGEEEEEEEDVVAGKRARCAGPPPPPCVDVAG---VDF 61
Query: 64 PLQSDECLALLLEKECHHLPHNDYLKRLRTG----DLDLAARQEAVDWIAKVHSHFGFGP 119
+ S+EC+A L+E E H+P DY +RLR G DLDL R +A+DWI KVHS++ F P
Sbjct: 62 AVPSEECVARLVETEADHMPREDYAERLRAGGGDGDLDLRVRMDAIDWIWKVHSYYSFAP 121
Query: 120 LCSYLTINYLDRFLSAYELPKGKVWMMQLLAVACLSLAAKMEETEVPLCLDLQVGQSKFL 179
L + L +NYLDRFLS Y+LP GK WM QLLAVACLSLAAKMEET+VP LDLQVG+ +++
Sbjct: 122 LTACLAVNYLDRFLSLYQLPDGKDWMTQLLAVACLSLAAKMEETDVPQSLDLQVGEERYV 181
Query: 180 FEAKTIQRMELLVLSTLKWRMQAITPFSFLDYFTRKITDDDDDHHQTPLRALFCRSIQII 239
FEAKTIQRMELLVLSTLKWRMQA+TPFS++DYF R++ D ++ L S ++I
Sbjct: 182 FEAKTIQRMELLVLSTLKWRMQAVTPFSYVDYFLRELNGGDPPSGRSAL-----LSSELI 236
Query: 240 TSSIKGIDFLEFKPSEIAAAVAISVTGETKTVVDTEKAISLLTQHVKKERVLKCIKMMND 299
+G + L F+PSEIAAAVA +V GE HV KER+ C +++
Sbjct: 237 LCIARGTECLGFRPSEIAAAVAAAVVGEEHAAF----------SHVNKERMSHCQEVIQA 286
Query: 300 -SLISGSVKSATSASLATSFPQSPIGVLDAA-CLSYKSDESTVGS 342
LI S + +++S P+SP GVLDAA CLSY+SD+S V S
Sbjct: 287 MELIHPKPSSPSRVFVSSSIPRSPTGVLDAAGCLSYRSDDSAVAS 331
>sp|Q8LGA1|CCD41_ARATH Cyclin-D4-1 OS=Arabidopsis thaliana GN=CYCD4-1 PE=1 SV=2
Length = 308
Score = 267 bits (683), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 142/277 (51%), Positives = 194/277 (70%), Gaps = 20/277 (7%)
Query: 66 QSDECLALLLEKECHHLPHNDYLKRLRTGDLDL-AARQEAVDWIAKVHSHFGFGPLCSYL 124
+S+E + ++EKE HLP +DY+KRLR+GDLDL R++A++WI K FGPLC L
Sbjct: 42 ESEEIIMEMVEKEKQHLPSDDYIKRLRSGDLDLNVGRRDALNWIWKACEVHQFGPLCFCL 101
Query: 125 TINYLDRFLSAYELPKGKVWMMQLLAVACLSLAAKMEETEVPLCLDLQVGQSKFLFEAKT 184
+NYLDRFLS ++LP GK W++QLLAVACLSLAAK+EETEVP+ +DLQVG +F+FEAK+
Sbjct: 102 AMNYLDRFLSVHDLPSGKGWILQLLAVACLSLAAKIEETEVPMLIDLQVGDPQFVFEAKS 161
Query: 185 IQRMELLVLSTLKWRMQAITPFSFLDYFTRKITDDDDDHHQTPLRALFCRSIQIITSSIK 244
+QRMELLVL+ LKWR++AITP S++ YF RK++ D Q P L RS+Q+I S+ K
Sbjct: 162 VQRMELLVLNKLKWRLRAITPCSYIRYFLRKMSKCD----QEPSNTLISRSLQVIASTTK 217
Query: 245 GIDFLEFKPSEIAAAVAISVTGETKTVVDTEKAISLLTQHVKKERVLKCIKMMNDSLISG 304
GIDFLEF+PSE+AAAVA+SV+GE + V + S L ++KERV K G
Sbjct: 218 GIDFLEFRPSEVAAAVALSVSGELQRVHFDNSSFSPLFSLLQKERVKKI----------G 267
Query: 305 SVKSATSASLATSFPQSPIGVLD--AACLSYKSDEST 339
+ + + L + Q+P GVL+ A C S+K+ +S+
Sbjct: 268 EMIESDGSDLCS---QTPNGVLEVSACCFSFKTHDSS 301
>sp|Q4KYM5|CCD42_ORYSJ Cyclin-D4-2 OS=Oryza sativa subsp. japonica GN=CYCD4-2 PE=2 SV=2
Length = 383
Score = 266 bits (679), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 165/361 (45%), Positives = 225/361 (62%), Gaps = 33/361 (9%)
Query: 1 MAPS----FDCVVSSLLCAEEDSSVF--DDINGSVVDEFENDATWHHGN----NRTQHRS 50
MAPS D S LLCAE++SS+ +D G V + G+
Sbjct: 1 MAPSSSSCHDAAASMLLCAEDNSSILWLEDEEGEVGERRSGGCRSMVGDLAAGGGGGSGG 60
Query: 51 RRFDDGGDMLLSLPLQSDECLALLLEKECHHLPHNDYLKRLRTG--DLDLAARQEAVDWI 108
++ DM P QS+EC+A L+E+E H+P DY +RLR G D+DL R EA+ WI
Sbjct: 61 GGVEEEEDMF---PRQSEECVASLVEREQAHMPRADYGERLRGGGGDVDLRVRSEAIGWI 117
Query: 109 AKVHSHFGFGPLCSYLTINYLDRFLSAYELPKGKVWMMQLLAVACLSLAAKMEETEVPLC 168
+V++++ F + +YL +NYLDRFLS YELP+G+ WM QLL+VACLS+AAKMEET VP C
Sbjct: 118 WEVYTYYNFSSVTAYLAVNYLDRFLSQYELPEGRDWMTQLLSVACLSIAAKMEETVVPQC 177
Query: 169 LDLQVGQSKFLFEAKTIQRMELLVLSTLKWRMQAITPFSFLDYFTRKITDDDDDHHQTPL 228
LDLQ+G+ +FLFE +TI RMELLVL+ L WRMQA+TPFS++DYF RK+ + + P
Sbjct: 178 LDLQIGEPRFLFEVETIHRMELLVLTNLNWRMQAVTPFSYIDYFLRKL----NSGNAAP- 232
Query: 229 RALFCRSIQIITSSIKGIDFLEFKPSEIAAAVAISVTGETKTVVDTEKAISLLTQHVKKE 288
R+ RS ++I G FLEF+PSEIAAAVA +V GE VV E+ I+ HV K
Sbjct: 233 RSWLLRSSELILRIAAGTGFLEFRPSEIAAAVAATVAGEATGVV--EEDIAEAFTHVDKG 290
Query: 289 RVLKCIKMMNDSLIS-----------GSVKSATSASLATSFPQSPIGVLDAACLSYKSDE 337
RVL+C + + D S S + ++++ ++S P+SP+ VLDA CLSYKSD+
Sbjct: 291 RVLQCQEAIQDHHYSMATINTVQPKPASTRRGSASASSSSVPESPVAVLDAGCLSYKSDD 350
Query: 338 S 338
+
Sbjct: 351 T 351
>sp|P42752|CCD21_ARATH Cyclin-D2-1 OS=Arabidopsis thaliana GN=CYCD2-1 PE=1 SV=3
Length = 361
Score = 259 bits (661), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 144/276 (52%), Positives = 198/276 (71%), Gaps = 16/276 (5%)
Query: 74 LLEKECHHLPHNDYLKRLRTGDLDLAARQEAVDWIAKVHSHFGFGPLCSYLTINYLDRFL 133
+L +E P DY+KRL +GDLDL+ R +A+DWI KV +H+ FG LC L++NYLDRFL
Sbjct: 70 MLVREIEFCPGTDYVKRLLSGDLDLSVRNQALDWILKVCAHYHFGHLCICLSMNYLDRFL 129
Query: 134 SAYELPKGKVWMMQLLAVACLSLAAKMEETEVPLCLDLQVGQSKFLFEAKTIQRMELLVL 193
++YELPK K W QLLAV+CLSLA+KMEET+VP +DLQV KF+FEAKTI+RMELLV+
Sbjct: 130 TSYELPKDKDWAAQLLAVSCLSLASKMEETDVPHIVDLQVEDPKFVFEAKTIKRMELLVV 189
Query: 194 STLKWRMQAITPFSFLDYFTRKITDDDDDHHQTPLRALFCRSIQIITSSIKGIDFLEFKP 253
+TL WR+QA+TPFSF+DYF KI+ ++ L RS + I ++ K I+FL+F+P
Sbjct: 190 TTLNWRLQALTPFSFIDYFVDKISGHVSEN-------LIYRSSRFILNTTKAIEFLDFRP 242
Query: 254 SE--IAAAVAISVTGETKTVVDTEKAISLLTQHVKKERVLKCIKMM----NDSLISGSVK 307
SE AAAV++S++GET+ +D EKA+S L +VK+ERV +C+ +M + + G+
Sbjct: 243 SEIAAAAAVSVSISGETE-CIDEEKALSSLI-YVKQERVKRCLNLMRSLTGEENVRGTSL 300
Query: 308 SATSASLAT-SFPQSPIGVLDAACLSYKSDESTVGS 342
S A +A + P SP+GVL+A CLSY+S+E TV S
Sbjct: 301 SQEQARVAVRAVPASPVGVLEATCLSYRSEERTVES 336
>sp|Q8LHA8|CCD22_ORYSJ Cyclin-D2-2 OS=Oryza sativa subsp. japonica GN=CYCD2-2 PE=2 SV=1
Length = 356
Score = 251 bits (642), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 133/280 (47%), Positives = 191/280 (68%), Gaps = 9/280 (3%)
Query: 63 LPLQSDECLALLLEKECHHLPHNDYLKRLRTGDLDLAARQEAVDWIAKVHSHFGFGPLCS 122
P+ SDE +ALL+EKE H P YL++L G L+ + R++A+DWI KVHS++ FGPL
Sbjct: 57 FPIDSDEFVALLVEKEMDHQPQRGYLEKLELGGLECSWRKDAIDWICKVHSYYNFGPLSL 116
Query: 123 YLTINYLDRFLSAYELPKGKVWMMQLLAVACLSLAAKMEETEVPLCLDLQVGQSKFLFEA 182
YL +NYLDRFLS++ LP + WM QLL+V+CLSLA KMEET VPL +DLQV ++++FEA
Sbjct: 117 YLAVNYLDRFLSSFNLPHDESWMQQLLSVSCLSLATKMEETVVPLPMDLQVFDAEYVFEA 176
Query: 183 KTIQRMELLVLSTLKWRMQAITPFSFLDYFTRKITDDDDDHHQTPLRALFCRSIQIITSS 242
+ I+RMEL+V+ TLKWR+QA+TPFSF+ YF K + + A +C + + T
Sbjct: 177 RHIKRMELIVMKTLKWRLQAVTPFSFIGYFLDKFNEGKPPSYTL---ASWCSDLTVGT-- 231
Query: 243 IKGIDFLEFKPSEIAAAVAISVTGETKTVVDTEKAISLLTQHVKKERVLKCIKMMNDSLI 302
+K FL F+PSEIAAAV ++V E + +V A+ V KE V++C ++M + +
Sbjct: 232 LKDSRFLSFRPSEIAAAVVLAVLAENQFLV-FNSALGESEIPVNKEMVMRCYELMVEKAL 290
Query: 303 SGSVKSATSASLATSFPQSPIGVLDAACLSYKSDESTVGS 342
VK +++ ++S P SPI VLDAAC S++SD++T+GS
Sbjct: 291 ---VKKIRNSNASSSVPHSPITVLDAACFSFRSDDTTLGS 327
>sp|Q0WQN9|CCD42_ARATH Cyclin-D4-2 OS=Arabidopsis thaliana GN=CYCD4-2 PE=1 SV=2
Length = 298
Score = 246 bits (627), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 122/225 (54%), Positives = 155/225 (68%), Gaps = 4/225 (1%)
Query: 43 NNRTQHRSRRFDDGGDMLLSLPLQSDECLALLLEKECHHLPHNDYLKRLRTGDLDLAARQ 102
+N +S D + PL+S+E + ++EKE H P +DYLKRLR GDLD R
Sbjct: 11 SNFDDEKSNSVDTRSIFQMGFPLESEEIVREMIEKERQHSPRDDYLKRLRNGDLDFNVRI 70
Query: 103 EAVDWIAKVHSHFGFGPLCSYLTINYLDRFLSAYELPKGKVWMMQLLAVACLSLAAKMEE 162
+A+ WI K FGPLC L +NYLDRFLS ++LP GK W +QLLAVACLSLAAK+EE
Sbjct: 71 QALGWIWKACEELQFGPLCICLAMNYLDRFLSVHDLPSGKAWTVQLLAVACLSLAAKIEE 130
Query: 163 TEVPLCLDLQVGQSKFLFEAKTIQRMELLVLSTLKWRMQAITPFSFLDYFTRKITDDDDD 222
T VP + LQVG F+FEAK++QRMELLVL+ L+WR++A+TP S++ YF KI D
Sbjct: 131 TNVPELMQLQVGAPMFVFEAKSVQRMELLVLNVLRWRLRAVTPCSYVRYFLSKINGYD-- 188
Query: 223 HHQTPLRALFCRSIQIITSSIKGIDFLEFKPSEIAAAVAISVTGE 267
Q P L RS+Q+I S+ KGIDFLEF+ SEIAAAVA+SV+GE
Sbjct: 189 --QEPHSRLVTRSLQVIASTTKGIDFLEFRASEIAAAVALSVSGE 231
>sp|P42751|CCD11_ARATH Cyclin-D1-1 OS=Arabidopsis thaliana GN=CYCD1-1 PE=1 SV=3
Length = 339
Score = 210 bits (534), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 107/232 (46%), Positives = 148/232 (63%), Gaps = 8/232 (3%)
Query: 69 ECLALLLEKECHHLPHNDYLKRLRTGDLDLAARQEAVDWIAKVHSHFGFGPLCSYLTINY 128
+ +A +E E H +P +DYL R +T LD +AR+++V WI KV +++ F PL +YL +NY
Sbjct: 50 DSIACFIEDERHFVPGHDYLSRFQTRSLDASAREDSVAWILKVQAYYNFQPLTAYLAVNY 109
Query: 129 LDRFLSAYELPKGKVWMMQLLAVACLSLAAKMEETEVPLCLDLQVGQSKFLFEAKTIQRM 188
+DRFL A LP+ W MQLLAVACLSLAAKMEE VP D QV K+LFEAKTI+RM
Sbjct: 110 MDRFLYARRLPETSGWPMQLLAVACLSLAAKMEEILVPSLFDFQVAGVKYLFEAKTIKRM 169
Query: 189 ELLVLSTLKWRMQAITPFSFLDYFTRKITDDDDDHHQTPLRALFCRSIQIITSSIKGIDF 248
ELLVLS L WR++++TPF F+ +F KI D T L + +II S+IK F
Sbjct: 170 ELLVLSVLDWRLRSVTPFDFISFFAYKI-----DPSGTFLGFFISHATEIILSNIKEASF 224
Query: 249 LEFKPSEIAAAVAISVTGE---TKTVVDTEKAISLLTQHVKKERVLKCIKMM 297
LE+ PS IAAA + V E +VV+ ++ + KE++++C ++M
Sbjct: 225 LEYWPSSIAAAAILCVANELPSLSSVVNPHESPETWCDGLSKEKIVRCYRLM 276
>sp|Q10K98|CCD23_ORYSJ Putative cyclin-D2-3 OS=Oryza sativa subsp. japonica GN=CYCD2-3
PE=3 SV=1
Length = 405
Score = 203 bits (517), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 104/231 (45%), Positives = 147/231 (63%), Gaps = 10/231 (4%)
Query: 74 LLEKECHHL---PHNDYLKRLRTGDLDLAARQEAVDWIAKVHSHFGFGPLCSYLTINYLD 130
+EKE + +YL +L G ++L+ R A+DWI KV +++ FGPLC+YL +NYLD
Sbjct: 74 FMEKEVEQMVETARGEYLTKLSNGGIELSCRIAAIDWICKVQAYYSFGPLCAYLAVNYLD 133
Query: 131 RFLSAYE--LPKGKVWMMQLLAVACLSLAAKMEETEVPLCLDLQVGQSKFLFEAKTIQRM 188
RFLS+ E + WM QLL VACLSLAAKMEET P LDLQV +++F+A+TI RM
Sbjct: 134 RFLSSVEFSVTNDMPWMQQLLIVACLSLAAKMEETAAPGTLDLQVCNPEYVFDAETIHRM 193
Query: 189 ELLVLSTLKWRMQAITPFSFLDYFTRKITDDDDDHHQTPLRALFCRSIQIITSSIKGIDF 248
E++VL+TLKWRMQA+TPF+++ +F KI + + + L R +II S++K F
Sbjct: 194 EIIVLTTLKWRMQAVTPFTYIGHFLDKINEGNRITSE-----LISRCTEIILSTMKATVF 248
Query: 249 LEFKPSEIAAAVAISVTGETKTVVDTEKAISLLTQHVKKERVLKCIKMMND 299
L F+PSEIA AVA+SV + V+D + V K+ V +C + M +
Sbjct: 249 LRFRPSEIATAVALSVVADGGRVLDFGGVLESSKLPVDKDNVGRCHQAMQE 299
>sp|Q0J233|CCD21_ORYSJ Cyclin-D2-1 OS=Oryza sativa subsp. japonica GN=CYCD2-1 PE=3 SV=2
Length = 308
Score = 191 bits (484), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 105/247 (42%), Positives = 152/247 (61%), Gaps = 25/247 (10%)
Query: 65 LQSDECLALLLEKECHHLPHNDYLKRLRTGDLDLAARQEAVDWIAKVHSHFGFGPLCSYL 124
L S +A L+ E + P +DY RLR+ +D AAR E+V WI KV + GF PL +YL
Sbjct: 46 LYSAASIAELIGGEAEYSPRSDYPDRLRSRSIDPAARAESVSWILKVQEYNGFLPLTAYL 105
Query: 125 TINYLDRFLSAYELPKGKVWMMQLLAVACLSLAAKMEETEVPLCLDLQVGQSKFLFEAKT 184
+NY+DRFLS LP+G+ W MQLLAVACLSLAAKMEET VP LDLQV S+++FE +T
Sbjct: 106 AVNYMDRFLSLRHLPEGQGWAMQLLAVACLSLAAKMEETLVPSLLDLQVECSRYVFEPRT 165
Query: 185 IQRMELLVLSTLKWRMQAITPFSFLDYFTRKITDDDDDHHQTPLRALFCRSIQ--IITSS 242
I RME L+L+ L WR++++TPF+F+D+F C+ I ++ ++
Sbjct: 166 ICRMEFLILTALNWRLRSVTPFTFIDFFA-------------------CKHISNAMVQNA 206
Query: 243 IKGIDFLEFKPSEIAAAVAISVTGETKTV--VDTEKAISLLTQHVKKERVLKCIKMMNDS 300
I FL+ PS +AAA + TGET ++ V+ E A++ + +E + C ++M
Sbjct: 207 NSDIQFLDHCPSSMAAAAVLCATGETPSLAFVNPELAVNWCI-GLAEEGISSCYQLMQ-Q 264
Query: 301 LISGSVK 307
L+ G+V+
Sbjct: 265 LVIGNVQ 271
>sp|Q8H339|CCD12_ORYSJ Cyclin-D1-2 OS=Oryza sativa subsp. japonica GN=CYCD1-2 PE=3 SV=2
Length = 354
Score = 182 bits (463), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 106/257 (41%), Positives = 153/257 (59%), Gaps = 10/257 (3%)
Query: 54 DDGGDMLLSLPLQSDECLALLL-EKECHHLPHNDYLKRLRTG-DLDLAARQEAVDWIAKV 111
DDGG+ D L+ E E H P DY RLR+G DLAAR ++V WI KV
Sbjct: 67 DDGGEEEEEEVWTVDVVAELIGGEAERSHSPRADYPGRLRSGRPADLAARADSVAWILKV 126
Query: 112 HSHFGFGPLCSYLTINYLDRFLSAYELPKGKVWMMQLLAVACLSLAAKMEETEVPLCLDL 171
+G P+ +YL ++Y+DRFLS + LP G W MQLLAV CLSLAAKMEET VP LDL
Sbjct: 127 RELYGMLPVTAYLAVSYMDRFLSLHRLP-GNGWAMQLLAVTCLSLAAKMEETLVPSILDL 185
Query: 172 QVGQSKFLFEAKTIQRMELLVLSTLKWRMQAITPFSFLDYFTRKITDDDDDHHQTPLRAL 231
Q+ ++++FE +TI RMELLVL L WR+++ITPF+F+ F K+ D + H +R L
Sbjct: 186 QMEDARYIFEHRTIFRMELLVLDALDWRLRSITPFTFMYLFADKV-DPNGKH----IREL 240
Query: 232 FCRSIQIITSSIKGIDFLEFKPSEIAAAVAISVTGETKTVVDTEKA--ISLLTQHVKKER 289
++ Q+ ++I +FL+ PS IAAA + + E +V + +S + +E
Sbjct: 241 IHQATQVTLATIHDTEFLDHCPSSIAAAAVLCASSEIMQLVSIDHGTLVSWRIIGLDEEA 300
Query: 290 VLKCIKMMNDSLISGSV 306
+++C ++M + S +V
Sbjct: 301 IIRCYRLMQQLISSNNV 317
>sp|Q9SN11|CCD33_ARATH Cyclin-D3-3 OS=Arabidopsis thaliana GN=CYCD3-3 PE=2 SV=1
Length = 361
Score = 171 bits (434), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 99/226 (43%), Positives = 133/226 (58%), Gaps = 11/226 (4%)
Query: 101 RQEAVDWIAKVHSHFGFGPLCSYLTINYLDRFLSAYELPKGKVWMMQLLAVACLSLAAKM 160
R++A+DWI KV SH+GF L + L +NY DRF+++ + K WM QL A+ACLSLAAK+
Sbjct: 86 REKALDWIFKVKSHYGFNSLTALLAVNYFDRFITSRKFQTDKPWMSQLTALACLSLAAKV 145
Query: 161 EETEVPLCLDLQVGQSKFLFEAKTIQRMELLVLSTLKWRMQAITPFSFLDYFTRKITDDD 220
EE VP LD QV +++++FEAKTIQRMELLVLSTL WRM +TP SF D+ R+ +
Sbjct: 146 EEIRVPFLLDFQVEEARYVFEAKTIQRMELLVLSTLDWRMHPVTPISFFDHIIRRYS--F 203
Query: 221 DDHHQTPLRALFCRSIQIITSSIKGIDFLEFKPSEIAAAVAISVTGETKTVVDTEKAISL 280
HHQ R ++ S I FL F PS +A A+ +SV + K + L
Sbjct: 204 KSHHQL---EFLSRCESLLLSIIPDSRFLSFSPSVLATAIMVSVIRDLKMCDEAVYQSQL 260
Query: 281 LT-QHVKKERVLKCIKMMNDSLISGSVKSATSASLATSFPQSPIGV 325
+T V E+V KC +++ D S S K + P SPIGV
Sbjct: 261 MTLLKVDSEKVNKCYELVLDH--SPSKKRMMN---WMQQPASPIGV 301
>sp|Q9FGQ7|CCD32_ARATH Cyclin-D3-2 OS=Arabidopsis thaliana GN=CYCD3-2 PE=2 SV=1
Length = 367
Score = 170 bits (430), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/233 (42%), Positives = 143/233 (61%), Gaps = 16/233 (6%)
Query: 98 LAARQEAVDWIAKVHSHFGFGPLCSYLTINYLDRFLSAYELPKGKVWMMQLLAVACLSLA 157
++ R+EA+DW+ +V SH+GF L + L +NY DRF+++ +L K WM QL+AVA LSLA
Sbjct: 93 VSCRKEALDWVLRVKSHYGFTSLTAILAVNYFDRFMTSIKLQTDKPWMSQLVAVASLSLA 152
Query: 158 AKMEETEVPLCLDLQVGQSKFLFEAKTIQRMELLVLSTLKWRMQAITPFSFLDYFTRKIT 217
AK+EE +VPL LDLQV ++++LFEAKTIQRMELL+LSTL+WRM +TP SF D+ R+
Sbjct: 153 AKVEEIQVPLLLDLQVEEARYLFEAKTIQRMELLILSTLQWRMHPVTPISFFDHIIRRF- 211
Query: 218 DDDDDHHQTPLRALFCRSIQ-IITSSIKGIDFLEFKPSEIAAAVAISVTGETKTV--VDT 274
H Q FCR + ++ S I F+ + PS +A A+ I V E K V+
Sbjct: 212 -GSKWHQQLD----FCRKCERLLISVIADTRFMRYFPSVLATAIMILVFEELKPCDEVEY 266
Query: 275 EKAISLLTQHVKKERVLKCIKMMNDSLISGSVKSATSASLATSFPQSPIGVLD 327
+ I+ L + V +E+V +C ++ L+ + +L SP GVLD
Sbjct: 267 QSQITTLLK-VNQEKVNECYEL----LLEHNPSKKRMMNLVDQ--DSPSGVLD 312
>sp|P42753|CCD31_ARATH Cyclin-D3-1 OS=Arabidopsis thaliana GN=CYCD3-1 PE=1 SV=3
Length = 376
Score = 164 bits (416), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 84/198 (42%), Positives = 128/198 (64%), Gaps = 6/198 (3%)
Query: 101 RQEAVDWIAKVHSHFGFGPLCSYLTINYLDRFLSAYELPKGKVWMMQLLAVACLSLAAKM 160
R+EAV WI +V++H+GF L + L I YLD+F+ +Y L + K WM+QL++VACLSLAAK+
Sbjct: 87 RKEAVGWILRVNAHYGFSTLAAVLAITYLDKFICSYSLQRDKPWMLQLVSVACLSLAAKV 146
Query: 161 EETEVPLCLDLQVGQSKFLFEAKTIQRMELLVLSTLKWRMQAITPFSFLDYFTRKITDDD 220
EET+VPL LD QV ++K++FEAKTIQRMELL+LSTL+W+M ITP SF+D+ R++ +
Sbjct: 147 EETQVPLLLDFQVEETKYVFEAKTIQRMELLILSTLEWKMHLITPISFVDHIIRRLGLKN 206
Query: 221 DDHHQTPLRALFCRSIQIITSSIKGIDFLEFKPSEIAAAVAISVTGETKTVVDTEKAISL 280
+ H + +++ S I F+ + PS +AAA + + + +L
Sbjct: 207 NAHWD-----FLNKCHRLLLSVISDSRFVGYLPSVVAAATMMRIIEQVDPFDPLSYQTNL 261
Query: 281 L-TQHVKKERVLKCIKMM 297
L ++ KE+V C ++
Sbjct: 262 LGVLNLTKEKVKTCYDLI 279
>sp|Q67V81|CCD11_ORYSJ Cyclin-D1-1 OS=Oryza sativa subsp. japonica GN=CYCD1-1 PE=3 SV=1
Length = 363
Score = 150 bits (380), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/204 (40%), Positives = 122/204 (59%), Gaps = 11/204 (5%)
Query: 103 EAVDWIAKVHSHFGFGPLCSYLTINYLDRFLSAYELPKGKVWMMQLLAVACLSLAAKMEE 162
E+V WI KV S GF P +YL ++Y+DRF+S+ LP W QLL VACLSLAAKMEE
Sbjct: 127 ESVSWILKVRSVHGFQPATAYLAVSYMDRFMSSRSLPD-HGWASQLLCVACLSLAAKMEE 185
Query: 163 TEVPLCLDLQVGQSKFLFEAKTIQRMELLVLSTLKWRMQAITPFSFLDYFTRKITDDDDD 222
+ P LDLQ+ ++F+FE +TIQRMEL+VL L WR++++TPF+F+D+F K+
Sbjct: 186 SSAPPLLDLQIEGTRFIFEPRTIQRMELIVLVELDWRLRSVTPFAFVDFFACKVGSSGRS 245
Query: 223 HHQTPLRALFCRSIQIITSSIKGIDFLEFKPSEIAAAVAISVTGETKTVVDTEKAISLLT 282
R L R+ QII S+I ++FL S +AAA + E+ + ++S +
Sbjct: 246 S-----RILALRACQIILSAIHELEFLNHCASSMAAAAVLFAVNESPAAMSHRSSVSSES 300
Query: 283 QH-----VKKERVLKCIKMMNDSL 301
+ +ER+ C +++ +L
Sbjct: 301 AASWCIGLTEERISSCYQLLQRAL 324
>sp|Q9ZR04|CCD61_ARATH Putative cyclin-D6-1 OS=Arabidopsis thaliana GN=CYCD6-1 PE=3 SV=1
Length = 302
Score = 127 bits (318), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/269 (33%), Positives = 151/269 (56%), Gaps = 28/269 (10%)
Query: 78 ECHHLPHNDYLKRLRTGDLDLAARQEAVDWIAKVHSHFGFGPLCSYLTINYLDRFLSAYE 137
E H+P + Y L++ L+ R +A+ I + F P +YL +NYLDRFLS+ +
Sbjct: 35 EFQHMPSSHYFHSLKSSAFLLSNRNQAISSITQYSRKFD-DPSLTYLAVNYLDRFLSSED 93
Query: 138 LPKGKVWMMQLLAVACLSLAAKMEETEVPLCLDLQVGQSKFLFEAKTIQRMELLVLSTLK 197
+P+ K W+++L++++C+SL+AKM + ++ + DL V + +F F+A+ I+RME ++L LK
Sbjct: 94 MPQSKPWILKLISLSCVSLSAKMRKPDMSVS-DLPV-EGEF-FDAQMIERMENVILGALK 150
Query: 198 WRMQAITPFSFLDYFTRKITDDDDDHHQTPLRALFCRSIQIITSSI-----KGIDFLEFK 252
WRM+++TPFSFL +F ++D PL L S++ TS + I FLEFK
Sbjct: 151 WRMRSVTPFSFLAFFISLFELKEED----PL--LLKHSLKSQTSDLTFSLQHDISFLEFK 204
Query: 253 PSEIAAAVAISVTGETKTVVDT--EKAISLLTQHVKKERVLKCIKMMNDS-LISGSVKSA 309
PS IA A + + E + I+ T +V K+ +++C K + + +I G + +
Sbjct: 205 PSVIAGAALLFASFELCPLQFPCFSNRINQCT-YVNKDELMECYKAIQERDIIVGENEGS 263
Query: 310 TSASLATSFPQSPIGVLDAACLSYKSDES 338
T ++ + VLD S +SD+S
Sbjct: 264 T---------ETAVNVLDQQFSSCESDKS 283
>sp|Q10QA2|CCD53_ORYSJ Cyclin-D5-3 OS=Oryza sativa subsp. japonica GN=CYCD5-3 PE=2 SV=1
Length = 345
Score = 125 bits (315), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/200 (38%), Positives = 115/200 (57%), Gaps = 13/200 (6%)
Query: 100 ARQEAVDWIAKVHSHFGFGPLCSYLTINYLDRFLSAYELPKGKVWMMQLLAVACLSLAAK 159
AR V WI K ++ F F +Y+ + YLDRFL+ + + K W +QLL+VACLSLAAK
Sbjct: 99 ARAWCVGWIVKTNAGFRFSLKTAYVAVTYLDRFLARRCVDRDKEWALQLLSVACLSLAAK 158
Query: 160 MEETEVPLCLDLQVGQSKFLFEAKTIQRMELLVLSTLKWRMQAITPFSFLDYFTRKITDD 219
+EE P + ++ +++ ++ RMELLVL+TLKW+M TPFS+L+ FT K D
Sbjct: 159 VEERRPPRLPEFKLD----MYDCASLMRMELLVLTTLKWQMITETPFSYLNCFTAKFRHD 214
Query: 220 DDDHHQTPLRALFCRSIQIITSSIKGIDFLEFKPSEIA-AAVAISVTGETKTVVDTEKA- 277
+ +A+ R+I+ I +SIK I + ++PS IA AA+ I+ ET +D K+
Sbjct: 215 ER-------KAIVLRAIECIFASIKVISSVGYQPSTIALAAILIARNKETAPNLDELKSV 267
Query: 278 ISLLTQHVKKERVLKCIKMM 297
+ L Q + V C M
Sbjct: 268 VGSLWQQLDTGHVYSCYNKM 287
>sp|Q2V3B2|CCD51_ARATH Cyclin-D5-1 OS=Arabidopsis thaliana GN=CYCD5-1 PE=2 SV=2
Length = 323
Score = 111 bits (277), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 64/157 (40%), Positives = 88/157 (56%), Gaps = 6/157 (3%)
Query: 104 AVDWIAKVHSHFGFGPLCSYLTINYLDRFLSA--YELPKGKVWMMQLLAVACLSLAAKME 161
A+DWI + FGF +Y+ I+Y D FL L K + W M+LL+VACLSLAAKME
Sbjct: 75 AIDWILTTRTRFGFQHQTAYIAISYFDLFLHKRFIGLQKDETWAMRLLSVACLSLAAKME 134
Query: 162 ETEVPLCLDLQVGQSKFLFEAKTIQRMELLVLSTLKWRMQAITPFSFLDYFTRKITDDDD 221
E VP L F+F+ I++ ELL+LSTL W+M ITPF + +YF KI+ D+
Sbjct: 135 ERIVP-GLSQYPQDHDFVFKPDVIRKTELLILSTLDWKMNLITPFHYFNYFLAKISQDN- 192
Query: 222 DHHQTPLRALFCRSIQIITSSIKGIDFLEFKPSEIAA 258
H + RS + + K I F E++ +AA
Sbjct: 193 --HSVSKDLVLLRSSDSLLALTKEISFTEYRQFVVAA 227
>sp|Q2QMW1|CCD52_ORYSJ Cyclin-D5-2 OS=Oryza sativa subsp. japonica GN=CYCD5-2 PE=2 SV=1
Length = 365
Score = 106 bits (264), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 110/208 (52%), Gaps = 11/208 (5%)
Query: 100 ARQEAVDWIAKVHSHFGFGPLCSYLTINYLDRFLSAYELPKGKV-WMMQLLAVACLSLAA 158
AR AV WI + +FGFG +YL I Y DRF + + + W +LL++AC+S+AA
Sbjct: 99 ARLAAVKWILETRGYFGFGHRTAYLAIAYFDRFCLRRRVDREAMPWAARLLSIACVSVAA 158
Query: 159 KMEETEVPLCLDLQVGQSKFLFEAKTIQRMELLVLSTLKWRMQAITPFSFLDYFTRKI-- 216
KMEE + P + G + +F + +I+RMELLVLSTL WRM A+TPF FL F+ ++
Sbjct: 159 KMEEYQSPALSEFDAGGGR-VFCSDSIRRMELLVLSTLGWRMGAVTPFDFLPCFSSRLHR 217
Query: 217 ----TDDDDDHHQTPLRALFCRSIQIITSSIKGIDFLEFKPSEIAAAVAISVT-GETKTV 271
H + ++ I ++ + L+++PS +AAA ++ + G T
Sbjct: 218 HHHGGAGAAGHGAAAAARVALNAVGFIFATAEAGSVLDYRPSTVAAAAILAASYGAPLTK 277
Query: 272 VDTEKAISLLTQH--VKKERVLKCIKMM 297
E +S L+ + KE V C MM
Sbjct: 278 EALESKMSNLSPSCLIDKENVHACYSMM 305
>sp|Q69S43|CCD61_ORYSJ Cyclin-D6-1 OS=Oryza sativa subsp. japonica GN=CYCD6-1 PE=2 SV=1
Length = 320
Score = 101 bits (252), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 141/294 (47%), Gaps = 46/294 (15%)
Query: 67 SDECLALLLEKECHHLPH------------NDYLKRLRT-GDLDLAARQEAVDWIAKVHS 113
+DE +A LL+ E HH P ++ ++R G+LD VH
Sbjct: 30 ADEPIASLLDAEGHHSPSVSAAASAARREAAGFISKVRYDGELD-------------VH- 75
Query: 114 HFGFGPLCSYLTINYLDRFLSAYELP-KGKVWMMQLLAVACLSLAAKMEETEVPLCLDLQ 172
P +YL +NY+DR+LS +L + W +LLA++CL+LAAKM+ D+Q
Sbjct: 76 -----PRVAYLALNYVDRYLSKRQLACERNPWAPRLLAISCLTLAAKMQRAAAISAADIQ 130
Query: 173 VGQSKFLFEAKTIQRMELLVLSTLKWRMQAITPFSFLDYFTRKITDDDDDHHQTPLRALF 232
G+ +F+F+ IQRME +VL+ L+WR +++TP +FL +F H L A+
Sbjct: 131 RGE-EFMFDEAKIQRMEQMVLNALEWRTRSVTPLAFLGFFLSACF--PQPRHPALLDAIK 187
Query: 233 CRSIQIITSSIKGIDFLEFKPSEIAAAVAISVTGETKT--VVDTEKAISLLTQHVKKERV 290
R++ ++ + EF PS AAA ++ GE ++ E ++ V E++
Sbjct: 188 ARAVDLLLRVQPEVKMAEFSPSVAAAAALLAAAGEVAGAHLLGFEAGVAACP-FVNSEKL 246
Query: 291 LKCIKMMNDSLISGSVKSATSASLATSFPQSPIGVLD--AACLSYKSDESTVGS 342
+C ++M + G +A + S T P+ VL + S +TVGS
Sbjct: 247 RECGEVMAAACGVGPSWAAAATSAET-----PVTVLGHHRSASSESERTTTVGS 295
>sp|Q0DQA9|CCD51_ORYSJ Cyclin-D5-1 OS=Oryza sativa subsp. japonica GN=CYCD5-1 PE=2 SV=2
Length = 367
Score = 98.6 bits (244), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 100/203 (49%), Gaps = 11/203 (5%)
Query: 100 ARQEAVDWIAKVHSHFGFGPLCSYLTINYLDRFLSAYELPKGKV-WMMQLLAVACLSLAA 158
AR+ V WI + FGF +YL I Y DRF + + + W +LLAVAC+SLAA
Sbjct: 108 ARRATVKWILETRGCFGFCHRTAYLAIAYFDRFCLRRCIDRSVMPWAARLLAVACVSLAA 167
Query: 159 KMEETEVPLCLDLQ--VGQSKFLFEAKTIQRMELLVLSTLKWRMQAITPFSFLDYFTRKI 216
KMEE P + + VG + F I+RMELLVLSTL WRM A+TPF +L + ++
Sbjct: 168 KMEEYRAPALSEFRAGVGDDGYEFSCVCIRRMELLVLSTLDWRMAAVTPFDYLPCLSSRL 227
Query: 217 TDDDDDHHQTPLRALFCRSIQIITSSIKGIDFLEFKPSEIAAAVAISVTGETKTVVDTEK 276
S +I S+ + L+ +PS +AAA ++ T T E
Sbjct: 228 ------RRHVGGGGGAGASAALIFSAAEAASVLDHRPSTVAAAAVLAATHGALTREALES 281
Query: 277 AISLLTQH--VKKERVLKCIKMM 297
+S L+ + KE V C M
Sbjct: 282 KMSGLSPSFLLDKEDVFACYSAM 304
>sp|Q0J3H7|CCD32_ORYSJ Cyclin-D3-2 OS=Oryza sativa subsp. japonica GN=CYCD3-2 PE=2 SV=1
Length = 364
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/120 (45%), Positives = 77/120 (64%), Gaps = 8/120 (6%)
Query: 98 LAARQEAVDWIAKVHSHFGFGPLCSYLTINYLDR-FLSAYELPKGKVWMMQLLAVACLSL 156
++AR+ AV W + + GF L + L + YLDR FL + WM +L AVAC++L
Sbjct: 75 VSAREAAVGWALRAVARLGFSALTAALAVAYLDRCFLGGALRLGDRPWMARLAAVACVAL 134
Query: 157 AAKMEETEVPLCLDLQVGQSK-------FLFEAKTIQRMELLVLSTLKWRMQAITPFSFL 209
AAK+EET VP+ LDLQ+ ++ ++FE KT++RMELLVLS L WRM +TP S+L
Sbjct: 135 AAKVEETRVPVLLDLQLCAAERADPNEAYVFEDKTVRRMELLVLSALGWRMHPVTPLSYL 194
>sp|Q01J96|CCB21_ORYSI Cyclin-B2-1 OS=Oryza sativa subsp. indica GN=CYCB2-1 PE=1 SV=1
Length = 423
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 100/206 (48%), Gaps = 14/206 (6%)
Query: 94 GDLDLAARQEAVDWIAKVHSHFGFGPLCSYLTINYLDRFLSAYELPKGKVWMMQLLAVAC 153
GD++ R +DW+ +VH F +LT+N +DRFL +P+ K +QL+ V
Sbjct: 180 GDINEKMRAILIDWLIEVHHKFELMDETLFLTVNIVDRFLEKQVVPRKK---LQLVGVTA 236
Query: 154 LSLAAKMEETEVPLCLDLQVGQSKFLFEAKTIQRMELLVLSTLKWRMQAITPFSFLDYFT 213
+ LA K EE VP+ DL V S + I ME L+L+TL++ M TP+ F+ F
Sbjct: 237 MLLACKYEEVAVPVVEDL-VLISDRAYTKGQILEMEKLILNTLQFNMSVPTPYVFMRRFL 295
Query: 214 RKITDDDDDHHQTPLRALFCRSIQIITSSIKGIDFLEFKPSEIAAAVAISVTGETKTVVD 273
+ D Q L + F I+ S+ L+++PS +AAA +
Sbjct: 296 KAAQSD----KQLQLLSFF-----ILELSLVEYQMLKYRPSLLAAAAVYTAQCALTRCQQ 346
Query: 274 TEKAISLLTQHVKKERVLKCIKMMND 299
K L +++ E++L+C +MM D
Sbjct: 347 WTKTCELHSRYT-GEQLLECSRMMVD 371
>sp|Q7XSJ6|CCB21_ORYSJ Cyclin-B2-1 OS=Oryza sativa subsp. japonica GN=CYCB2-1 PE=1 SV=2
Length = 420
Score = 84.0 bits (206), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 100/206 (48%), Gaps = 14/206 (6%)
Query: 94 GDLDLAARQEAVDWIAKVHSHFGFGPLCSYLTINYLDRFLSAYELPKGKVWMMQLLAVAC 153
GD++ R +DW+ +VH F +LT+N +DRFL +P+ K +QL+ V
Sbjct: 180 GDINEKMRAILIDWLIEVHHKFELMDETLFLTVNIVDRFLEKQVVPRKK---LQLVGVTA 236
Query: 154 LSLAAKMEETEVPLCLDLQVGQSKFLFEAKTIQRMELLVLSTLKWRMQAITPFSFLDYFT 213
+ LA K EE VP+ DL V S + I ME L+L+TL++ M TP+ F+ F
Sbjct: 237 MLLACKYEEVAVPVVEDL-VLISDRAYTKGQILEMEKLILNTLQFNMSVPTPYVFMRRFL 295
Query: 214 RKITDDDDDHHQTPLRALFCRSIQIITSSIKGIDFLEFKPSEIAAAVAISVTGETKTVVD 273
+ D Q L + F I+ S+ L+++PS +AAA +
Sbjct: 296 KAAQSD----KQLQLLSFF-----ILELSLVEYQMLKYRPSLLAAAAVYTAQCALTRCQQ 346
Query: 274 TEKAISLLTQHVKKERVLKCIKMMND 299
K L +++ E++L+C +MM D
Sbjct: 347 WTKTCELHSRYT-GEQLLECSRMMVD 371
>sp|Q9LZM0|CCD71_ARATH Putative cyclin-D7-1 OS=Arabidopsis thaliana GN=CYCD7-1 PE=3 SV=1
Length = 341
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 105/232 (45%), Gaps = 11/232 (4%)
Query: 68 DECLALLLEKECHHLPHNDYLKRLRTGDLDLAARQEAVDWIAKVHSHFGFGPLCSYLTIN 127
+E +A+ LEKE H D R A W+ + S + N
Sbjct: 45 EEAIAMDLEKELCFNNHGDKFVEFFVSKKLTDYRFHAFQWLIQTRSRLNLSYETVFSAAN 104
Query: 128 YLDRFLSAYELPKGKVWMMQLLAVACLSLAAKMEETEVPLCLDLQVGQSKFLFEAKTIQR 187
DRF+ + WM++L+AV LS+A+K E PL +L++ +F T+ +
Sbjct: 105 CFDRFVYMTCCDEWTNWMVELVAVTSLSIASKFNEVTTPLLEELEMEGLTHMFHVNTVAQ 164
Query: 188 MELLVLSTLKWRMQAITPFSFLDYFTRKITDDDDDHHQTPLRALFCRSIQIITSSIKGID 247
MEL++L L+WR+ A+T ++F KI D + R + I +
Sbjct: 165 MELIILKALEWRVNAVTSYTFSQTLVSKIGMVGD-------HMIMNRITNHLLDVICDLK 217
Query: 248 FLEFKPSEIAAAVAISVTGETKTVVDTEKAISLLTQHVKKERVLKCIKMMND 299
L++ PS +A A AI + E K V E ++L Q+ KE+++KC+ M +
Sbjct: 218 MLQYPPSVVATA-AIWILMEDK--VCRESIMNLFEQN-HKEKIVKCVDGMKN 265
>sp|Q53MB7|CCD71_ORYSJ Putative cyclin-D7-1 OS=Oryza sativa subsp. japonica GN=CYCD7-1
PE=3 SV=1
Length = 320
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 60/96 (62%), Gaps = 1/96 (1%)
Query: 115 FGFGPLCSYLTINYLDRFLSAYELPKGKVWMMQLLAVACLSLAAKMEETEVPLCLDLQVG 174
G ++ NYLDRFLS K + WM+++++V CLSLA K++E +P DLQ+
Sbjct: 99 LGLEAATAFNAANYLDRFLSINCHLKWEEWMVEVVSVGCLSLACKLDEVTIPSLHDLQME 158
Query: 175 QS-KFLFEAKTIQRMELLVLSTLKWRMQAITPFSFL 209
++ F A TI+ MEL +L L+WR+ +TPFSFL
Sbjct: 159 EAMGHSFRASTIRDMELTLLKALRWRLACVTPFSFL 194
>sp|Q9C6Y3|CCA11_ARATH Cyclin-A1-1 OS=Arabidopsis thaliana GN=CYCA1-1 PE=1 SV=1
Length = 460
Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 93/190 (48%), Gaps = 17/190 (8%)
Query: 74 LLEKECHHLPHNDYLKRLRTGDLDLAARQEAVDWIAKVHSHFGFGPLCSYLTINYLDRFL 133
L E P DY++R++ D++ + R VDW+ +V + P YLT+NY+DR+L
Sbjct: 202 LRASEAKKRPDVDYMERVQ-KDVNSSMRGILVDWLIEVSEEYRLVPETLYLTVNYIDRYL 260
Query: 134 SAYELPKGKVWMMQLLAVACLSLAAKMEETEVPLCLDLQVGQSKFLFEAKTIQ----RME 189
S + + K +QLL VAC+ +AAK EE P QV + ++ + ++ ME
Sbjct: 261 SGNVISRQK---LQLLGVACMMIAAKYEEICAP-----QVEEFCYITDNTYLKDEVLDME 312
Query: 190 LLVLSTLKWRMQAITPFSFLDYFTRKITDDDDDHHQTPLRALFCRSIQIITSSIKGIDFL 249
VL+ LK+ M A T FL F R H+ PL L C + I S+ L
Sbjct: 313 SDVLNYLKFEMTAPTTKCFLRRFVRAA----HGVHEAPLMQLECMANYIAELSLLEYTML 368
Query: 250 EFKPSEIAAA 259
PS +AA+
Sbjct: 369 SHSPSLVAAS 378
>sp|Q0INT0|CCA13_ORYSJ Cyclin-A1-3 OS=Oryza sativa subsp. japonica GN=CYCA1-3 PE=2 SV=2
Length = 491
Score = 79.0 bits (193), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 96/195 (49%), Gaps = 22/195 (11%)
Query: 74 LLEKECHHLPHNDYLKRLRTGDLDLAARQEAVDWIAKVHSHFGFGPLCSYLTINYLDRFL 133
L E E P D+++ L+ D++ + R +DW+ +V + P YLT+NY+DR+L
Sbjct: 231 LREAETRKHPSTDFMETLQ-KDVNPSMRAILIDWLVEVAEEYRLVPDTLYLTVNYIDRYL 289
Query: 134 SAYELPKGKVWMMQLLAVACLSLAAKMEETEVPLCLDLQVGQSKFLFEAKTIQRMELLVL 193
S E+ + + +QLL VAC+ +AAK +E P + F + ++ ME VL
Sbjct: 290 SGNEINRQR---LQLLGVACMLIAAKYKEICAPQVEEFCYITDNTYFRDEVLE-MEASVL 345
Query: 194 STLKWRMQAITPFSFLDYFTR--KITDDDDDHHQTPLRALFCRSIQIITSSIKGIDFLEF 251
+ LK+ M A T FL F R +++D+D H ++ + + + + LE+
Sbjct: 346 NYLKFEMTAPTAKCFLRRFVRVAQVSDEDPALH-----------LEFLANYVAELSLLEY 394
Query: 252 K----PSEIAAAVAI 262
P + AA AI
Sbjct: 395 NLLSYPPSLVAASAI 409
>sp|Q7F830|CCA11_ORYSJ Cyclin-A1-1 OS=Oryza sativa subsp. japonica GN=CYCA1-1 PE=2 SV=1
Length = 508
Score = 78.6 bits (192), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 96/195 (49%), Gaps = 22/195 (11%)
Query: 74 LLEKECHHLPHNDYLKRLRTGDLDLAARQEAVDWIAKVHSHFGFGPLCSYLTINYLDRFL 133
L E E P D+++ ++ D++ + R +DW+ +V + P YLT+NY+DR+L
Sbjct: 248 LREAETRKRPSTDFMETIQ-KDVNPSMRAILIDWLVEVAEEYRLVPDTLYLTVNYIDRYL 306
Query: 134 SAYELPKGKVWMMQLLAVACLSLAAKMEETEVPLCLDLQVGQSKFLFEAKTIQRMELLVL 193
S E+ + + +QLL VAC+ +AAK EE P + F + ++ ME VL
Sbjct: 307 SGNEINRQR---LQLLGVACMLIAAKYEEICAPQVEEFCYITDNTYFRDEVLE-MEASVL 362
Query: 194 STLKWRMQAITPFSFLDYFTR--KITDDDDDHHQTPLRALFCRSIQIITSSIKGIDFLEF 251
+ LK+ + A T FL F R +++D+D H ++ + + + + LE+
Sbjct: 363 NYLKFEVTAPTAKCFLRRFVRVAQVSDEDPALH-----------LEFLANYVAELSLLEY 411
Query: 252 K----PSEIAAAVAI 262
P + AA AI
Sbjct: 412 NLLSYPPSLVAASAI 426
>sp|Q90459|CCND1_DANRE G1/S-specific cyclin-D1 OS=Danio rerio GN=ccnd1 PE=2 SV=1
Length = 291
Score = 78.6 bits (192), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 124/251 (49%), Gaps = 16/251 (6%)
Query: 65 LQSDECLALLLEKECHHLPHNDYLKRLRTGDLDLAARQEAVDWIAKVHSHFGFGPLCSYL 124
L +D L +L+ E ++LP +Y K ++ ++ R+ W+ +V L
Sbjct: 22 LLNDRVLQTMLKAEENYLPSPNYFKCVQ-KEIVPKMRKIVATWMLEVCEEQKCEEEVFPL 80
Query: 125 TINYLDRFLSAYELPKGKVWMMQLLAVACLSLAAKMEETEVPLCLDLQVGQSKFLFEAKT 184
+NYLDRFLS K + +QLL C+ LA+KM+ET VPL + +
Sbjct: 81 AMNYLDRFLSVEPTKKTR---LQLLGATCMFLASKMKET-VPLTAEKLCIYTDNSVRPGE 136
Query: 185 IQRMELLVLSTLKWRMQAITPFSFLDYFTRKITDDDDDHHQTPLRALFCRSIQIITSSIK 244
+ +MELL L+ LKW + ++TP F+++F K+ HQ+ + L + +
Sbjct: 137 LLQMELLALNKLKWDLASVTPHDFIEHFLAKLP-----IHQSSKQILRKHAQTFVALCAT 191
Query: 245 GIDFLEFKPSEIAA-AVAISVTG----ETKTVVDTEKAISLLTQHVKKER-VLKCIKMMN 298
++F+ PS IAA +VA +V G T + + ++ + L+Q ++ + L+ +
Sbjct: 192 DVNFIASPPSMIAAGSVAAAVQGLYLKSTDSCLSSQNLTNFLSQVIRSDPDCLRSCQEQI 251
Query: 299 DSLISGSVKSA 309
+SL+ S++ A
Sbjct: 252 ESLLESSLRQA 262
>sp|Q0JPA4|CCA12_ORYSJ Cyclin-A1-2 OS=Oryza sativa subsp. japonica GN=CYCA1-2 PE=3 SV=2
Length = 477
Score = 78.6 bits (192), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 96/195 (49%), Gaps = 22/195 (11%)
Query: 74 LLEKECHHLPHNDYLKRLRTGDLDLAARQEAVDWIAKVHSHFGFGPLCSYLTINYLDRFL 133
L E E P D+++ ++ D++ + R +DW+ +V + P YLT+NY+DR+L
Sbjct: 218 LREAETRKRPSTDFMETIQ-KDVNPSMRAILIDWLVEVAEEYRLVPDTLYLTVNYIDRYL 276
Query: 134 SAYELPKGKVWMMQLLAVACLSLAAKMEETEVPLCLDLQVGQSKFLFEAKTIQRMELLVL 193
S E+ + + +QLL VAC+ +AAK EE P + F + ++ ME VL
Sbjct: 277 SGNEINRQR---LQLLGVACMLIAAKYEEICAPQVEEFCYITDNTYFRDEVLE-MEASVL 332
Query: 194 STLKWRMQAITPFSFLDYFTR--KITDDDDDHHQTPLRALFCRSIQIITSSIKGIDFLEF 251
+ LK+ + A T FL F R +++D+D H ++ + + + + LE+
Sbjct: 333 NYLKFEVTAPTAKCFLRRFVRVAQVSDEDPALH-----------LEFLANYVAELSLLEY 381
Query: 252 K----PSEIAAAVAI 262
P + AA AI
Sbjct: 382 NLLSYPPSLVAASAI 396
>sp|Q5SCB5|CCND_OSTTA Cyclin-D OS=Ostreococcus tauri GN=CycD PE=3 SV=1
Length = 374
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 86/176 (48%), Gaps = 21/176 (11%)
Query: 99 AARQEAVDWIAKVHSHFGFGPLCSYLTINYLDRFLSAYELPKGKVWMMQLLAVACLSLAA 158
A R + V+WI V + FGP + + I Y DR LS +PK + L+A+ CL +A
Sbjct: 105 AFRSQLVEWILDVCAGERFGPTTADVAIAYTDRVLSKTVVPKTS---LHLVALCCLHIAV 161
Query: 159 KMEETE--VPLCLDLQVGQSKFLFEAKTIQRMELLVLSTLKWRMQAITPFSFLDYF---- 212
K EE E VP L+ S ++ + I++MEL VL L W + +TP FL+ F
Sbjct: 162 KYEEIEERVPTMSKLRSWTSN-MYSPEIIRKMELAVLIELGWDLGVLTPAHFLESFLALT 220
Query: 213 TRKITDDDDDHH--------QTPLRALFCRSIQIITSSIKGIDFLEFKPSEIAAAV 260
I+D DD H + LR C Q+ + ++ L PS+IA+AV
Sbjct: 221 NGGISDGDDIEHGDAYKERYREELRYFVC---QLYSLCVQDTSLLNQPPSQIASAV 273
>sp|P50755|CCND1_XENLA G1/S-specific cyclin-D1 OS=Xenopus laevis GN=ccnd1 PE=2 SV=1
Length = 291
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 130/289 (44%), Gaps = 28/289 (9%)
Query: 54 DDGGDMLLSLPLQSDECLALLLEKECHHLPHNDYLKRLRTGDLDLAARQEAVDWIAKVHS 113
D G L L +D L +L+ E P Y K ++ L R+ W+ +V
Sbjct: 9 DTIGRAHLDRNLITDRVLQTMLKAEETSCPSMSYFKCVQKEILP-NMRKIVATWMLEVCE 67
Query: 114 HFGFGPLCSYLTINYLDRFLSAYELPKGKVWMMQLLAVACLSLAAKMEETEVPLCLDLQV 173
L +NYLDRFLS P K W+ QLL C+ LA+KM+ET +PL +
Sbjct: 68 EQKCEEEVFPLAMNYLDRFLSVE--PLRKSWL-QLLGATCMFLASKMKET-IPLTAEKLC 123
Query: 174 GQSKFLFEAKTIQRMELLVLSTLKWRMQAITPFSFLDYFTRKITDDDD------DHHQTP 227
+ + MEL VL+ LKW + ++TP F+++F K+ +D H QT
Sbjct: 124 IYTDNSIRPDELLIMELRVLNKLKWDLASVTPHDFIEHFLNKMPLTEDTKQIIRKHAQT- 182
Query: 228 LRALFCRSIQIITSSIKGIDFLEFKPSEIAA-AVAISVT----GETKTVVDTEKAISLLT 282
+ ++F+ PS IAA +VA +V G +V T++ L+
Sbjct: 183 ----------FVALCATDVNFISNPPSMIAAGSVAAAVQGLNLGNADSVFSTQRLTLFLS 232
Query: 283 QHVKKER-VLKCIKMMNDSLISGSVKSATSASLATSFPQSPIGVLDAAC 330
Q +K + L+ + +SL+ S++ A A+S ++ + +D +C
Sbjct: 233 QVIKCDPDCLRACQEQIESLLESSLRQAQQQHNASSDTKNMVDEVDISC 281
>sp|P32943|CGS6_YEAST S-phase entry cyclin-6 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=CLB6 PE=2 SV=2
Length = 380
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 95/194 (48%), Gaps = 16/194 (8%)
Query: 67 SDECLALLLEKECHHLPHNDYLKRLRTG-DLDLAARQEAVDWIAKVHSHFGFGPLCSYLT 125
+D + L EKE LP ++YL ++ L + R +DW+ +VH F P +L
Sbjct: 121 TDSIFSHLYEKEIQMLPTHNYLMDTQSPYHLKSSMRALLIDWLVEVHEKFHCLPETLFLA 180
Query: 126 INYLDRFLSAYELPKGKVWMMQLLAVACLSLAAKMEETEVPLCLDL-QVGQSKFLFEAKT 184
IN LDRFLS + K +QLL + CL +A K EE ++P + V E
Sbjct: 181 INLLDRFLSQNVVKLNK---LQLLCITCLFIACKFEEVKLPKITNFAYVTDGAATVEG-- 235
Query: 185 IQRMELLVLSTLKWRMQAITPFSFLDYFTRKITDDDDDHHQTPLRALFCRSIQIITSSIK 244
I++ EL VLS+L + + P +F+ R+I+ D+ +T A F I+ SI
Sbjct: 236 IRKAELFVLSSLGYNISLPNPLNFI----RRISKADNYCIETRNMAKF-----IMEYSIC 286
Query: 245 GIDFLEFKPSEIAA 258
F+ KPS +AA
Sbjct: 287 CNKFIHLKPSYLAA 300
>sp|Q0D9C7|CCB22_ORYSJ Cyclin-B2-2 OS=Oryza sativa subsp. japonica GN=CYCB2-2 PE=1 SV=1
Length = 419
Score = 75.9 bits (185), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 99/207 (47%), Gaps = 14/207 (6%)
Query: 91 LRTGDLDLAARQEAVDWIAKVHSHFGFGPLCSYLTINYLDRFLSAYELPKGKVWMMQLLA 150
L D++ R +DW+ +VH +LT+N +DRFL+ + + K +QL+
Sbjct: 185 LSQNDINEKMRGILIDWLIEVHYKLELLDETLFLTVNIIDRFLARENVVRKK---LQLVG 241
Query: 151 VACLSLAAKMEETEVPLCLDLQVGQSKFLFEAKTIQRMELLVLSTLKWRMQAITPFSFLD 210
V + LA K EE VP+ DL + + + I ME ++++TL++ M TP+ F+
Sbjct: 242 VTAMLLACKYEEVSVPVVEDLILICDR-AYTRTDILEMERMIVNTLQFDMSVPTPYCFMR 300
Query: 211 YFTRKITDDDDDHHQTPLRALFCRSIQIITSSIKGIDFLEFKPSEIAAAVAISVTGETKT 270
F + D + L S II S+ + L+F+PS +AAA +
Sbjct: 301 RFLKAAQSD---------KKLELMSFFIIELSLVEYEMLKFQPSMLAAAAIYTAQCTING 351
Query: 271 VVDTEKAISLLTQHVKKERVLKCIKMM 297
K L T++ +E++++C KMM
Sbjct: 352 FKSWNKCCELHTKY-SEEQLMECSKMM 377
>sp|A2YH60|CCB22_ORYSI Cyclin-B2-2 OS=Oryza sativa subsp. indica GN=CYCB2-2 PE=1 SV=2
Length = 419
Score = 75.9 bits (185), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 99/207 (47%), Gaps = 14/207 (6%)
Query: 91 LRTGDLDLAARQEAVDWIAKVHSHFGFGPLCSYLTINYLDRFLSAYELPKGKVWMMQLLA 150
L D++ R +DW+ +VH +LT+N +DRFL+ + + K +QL+
Sbjct: 185 LSQNDINEKMRGILIDWLIEVHYKLELLDETLFLTVNIIDRFLARENVVRKK---LQLVG 241
Query: 151 VACLSLAAKMEETEVPLCLDLQVGQSKFLFEAKTIQRMELLVLSTLKWRMQAITPFSFLD 210
V + LA K EE VP+ DL + + + I ME ++++TL++ M TP+ F+
Sbjct: 242 VTAMLLACKYEEVSVPVVEDLILICDR-AYTRTDILEMERMIVNTLQFDMSVPTPYCFMR 300
Query: 211 YFTRKITDDDDDHHQTPLRALFCRSIQIITSSIKGIDFLEFKPSEIAAAVAISVTGETKT 270
F + D + L S II S+ + L+F+PS +AAA +
Sbjct: 301 RFLKAAQSD---------KKLELMSFFIIELSLVEYEMLKFQPSMLAAAAIYTAQCTING 351
Query: 271 VVDTEKAISLLTQHVKKERVLKCIKMM 297
K L T++ +E++++C KMM
Sbjct: 352 FKSWNKCCELHTKY-SEEQLMECSKMM 377
>sp|Q9LDM4|CCB23_ARATH Cyclin-B2-3 OS=Arabidopsis thaliana GN=CYCB2-3 PE=2 SV=2
Length = 429
Score = 75.1 bits (183), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 97/203 (47%), Gaps = 14/203 (6%)
Query: 95 DLDLAARQEAVDWIAKVHSHFGFGPLCSYLTINYLDRFLSAYELPKGKVWMMQLLAVACL 154
DL+ R +DW+ +VH F YLTIN +DRFL+ +++ + K +QL+ V L
Sbjct: 204 DLNERMRGILIDWLIEVHYKFELMEETLYLTINVIDRFLAVHQIVRKK---LQLVGVTAL 260
Query: 155 SLAAKMEETEVPLCLDLQVGQSKFLFEAKTIQRMELLVLSTLKWRMQAITPFSFLDYFTR 214
LA K EE VP+ DL + K + + + ME L+ +TL++ TP+ F+ F +
Sbjct: 261 LLACKYEEVSVPVVDDLILISDK-AYSRREVLDMEKLMANTLQFNFSLPTPYVFMKRFLK 319
Query: 215 KITDDDDDHHQTPLRALFCRSIQIITSSIKGIDFLEFKPSEIAAAVAISVTGETKTVVDT 274
D + L S +I + + LE+ PS++AA+ + K +
Sbjct: 320 AAQSD---------KKLEILSFFMIELCLVEYEMLEYLPSKLAASAIYTAQCTLKGFEEW 370
Query: 275 EKAISLLTQHVKKERVLKCIKMM 297
K T + +K+ +L C + M
Sbjct: 371 SKTCEFHTGYNEKQ-LLACARKM 392
>sp|P24861|CCNA_PATVU G2/mitotic-specific cyclin-A OS=Patella vulgata PE=2 SV=1
Length = 426
Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 20/208 (9%)
Query: 55 DGGDMLLSLPLQSDECLALLLEKECHHLPHNDYLKRLRTGDLDLAARQEAVDWIAKVHSH 114
D ++LS+P +++ L E E H Y+K+ D+ + R VDW+ +V
Sbjct: 160 DREAIILSVPEYAEDIYKHLREAESRHRSKPGYMKK--QPDITNSMRSILVDWMVEVSEE 217
Query: 115 FGFGPLCSYLTINYLDRFLSAYELPKGKVWMMQLLAVACLSLAAKMEETEVPLCLDLQVG 174
+ +L INY+DRFLS + +GK +QL+ A + +A+K EE P + V
Sbjct: 218 YKLHRETLFLAINYIDRFLSQMSVLRGK---LQLVGAASMFIASKYEEIYPPEVSEF-VY 273
Query: 175 QSKFLFEAKTIQRMELLVLSTLKWRMQAITPFSFLDYFTRKITDDDDDHHQTPLRALFCR 234
+ +E K + RME L+L L + + T F D + K+ D D+ +
Sbjct: 274 ITDDTYEQKQVLRMEHLILKVLSFDVAQPTINWFTDTYA-KMADTDET----------TK 322
Query: 235 SIQIITSSIKGID---FLEFKPSEIAAA 259
S+ + S + +D +L++ PS IAAA
Sbjct: 323 SLSMYLSELTLVDADPYLKYLPSTIAAA 350
>sp|P46278|CCNB2_MEDSV G2/mitotic-specific cyclin-2 OS=Medicago sativa subsp. varia PE=2
SV=1
Length = 434
Score = 72.8 bits (177), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 85/170 (50%), Gaps = 15/170 (8%)
Query: 96 LDLAARQEA--VDWIAKVHSHFGFGPLCSYLTINYLDRFLSAYELPKGKVWMMQLLAVAC 153
LDL R A VDW+ +VH F +LT+N +DRFL+ + + K +QL+ +
Sbjct: 202 LDLNERMRAILVDWLIEVHDKFDLMQETLFLTVNLIDRFLAKQNVVRKK---LQLVGLVA 258
Query: 154 LSLAAKMEETEVPLCLDLQVGQSKFLFEAKTIQRMELLVLSTLKWRMQAITPFSFLDYFT 213
+ LA K EE VP+ DL + + + K I ME L+L+TL++ M T + F+ F
Sbjct: 259 MLLACKYEEVSVPVVSDL-IHIADRAYTRKDILEMEKLMLNTLQYNMSLPTAYVFMRRFL 317
Query: 214 RKITDDDDDHHQTPLRALFCRSIQIITSSIKGIDFLEFKPSEIAAAVAIS 263
+ D + L A F ++ S+ + L+F PS +AAA +
Sbjct: 318 KAAQADK----KLELVAFF-----LVDLSLVEYEMLKFPPSLVAAAAVYT 358
>sp|P51986|CCNA_HYDVD G2/mitotic-specific cyclin-A (Fragment) OS=Hydra viridissima PE=2
SV=1
Length = 420
Score = 72.4 bits (176), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 97/200 (48%), Gaps = 12/200 (6%)
Query: 60 LLSLPLQSDECLALLLEKECHHLPHNDYLKRLRTGDLDLAARQEAVDWIAKVHSHFGFGP 119
+ LP + + L + E + P ++Y+++ D++ + R +DW+ +V + P
Sbjct: 159 VFELPEYAQDIHNYLKKSEAKYRPKSNYMRK--QTDINSSMRAILIDWLVEVSEEYKLIP 216
Query: 120 LCSYLTINYLDRFLSAYELPKGKVWMMQLLAVACLSLAAKMEETEVPLCLDLQVGQSKFL 179
YL+++Y+DRFLS + +GK +QL+ AC+ +AAK EE P + V +
Sbjct: 217 QTLYLSVSYIDRFLSHMSVLRGK---LQLVGAACMLVAAKFEEIYPPEVAEF-VYITDDT 272
Query: 180 FEAKTIQRMELLVLSTLKWRMQAITPFSFLDYFTRKITDDDDDHHQTPLRALFCRSIQII 239
+ AK + RME L+L TL + + T FL + + Q A + + +I
Sbjct: 273 YTAKQVLRMEHLILKTLAFDLSVPTCRDFLSRYL--FAANAKPESQLKYLAEYLSELTLI 330
Query: 240 TSSIKGIDFLEFKPSEIAAA 259
I +++ PS IAA+
Sbjct: 331 NCDIS----VKYAPSMIAAS 346
>sp|P30278|CCNB2_MEDSA G2/mitotic-specific cyclin-2 (Fragment) OS=Medicago sativa PE=2
SV=1
Length = 328
Score = 72.4 bits (176), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 85/170 (50%), Gaps = 15/170 (8%)
Query: 96 LDLAARQEA--VDWIAKVHSHFGFGPLCSYLTINYLDRFLSAYELPKGKVWMMQLLAVAC 153
LDL R A VDW+ +VH F +LT+N +DRFL+ + + K +QL+ +
Sbjct: 96 LDLNERMRAILVDWLIEVHDKFDLMQETLFLTVNLIDRFLAKQNVVRKK---LQLVGLVA 152
Query: 154 LSLAAKMEETEVPLCLDLQVGQSKFLFEAKTIQRMELLVLSTLKWRMQAITPFSFLDYFT 213
+ LA K EE VP+ DL + + + K I ME L+L+TL++ M T + F+ F
Sbjct: 153 MLLACKYEEVSVPVVSDL-IHIADRAYTRKDILEMEKLMLNTLQYNMSLPTAYVFMRRFL 211
Query: 214 RKITDDDDDHHQTPLRALFCRSIQIITSSIKGIDFLEFKPSEIAAAVAIS 263
+ D + L A F ++ S+ + L+F PS +AAA +
Sbjct: 212 KAAQAD----KKLELVAFF-----LVDLSLVEYEMLKFPPSLVAAAAVYT 252
>sp|P30183|CCB11_ARATH Cyclin-B1-1 OS=Arabidopsis thaliana GN=CYCB1-1 PE=1 SV=2
Length = 428
Score = 71.6 bits (174), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 66/126 (52%), Gaps = 4/126 (3%)
Query: 95 DLDLAARQEAVDWIAKVHSHFGFGPLCSYLTINYLDRFLSAYELPKGKVWMMQLLAVACL 154
D++ R V+W+ VH F P YLT+N LDRFLS +P+ + +QL+ ++ L
Sbjct: 191 DINEKMRLILVEWLIDVHVRFELNPETFYLTVNILDRFLSVKPVPRKE---LQLVGLSAL 247
Query: 155 SLAAKMEETEVPLCLDLQVGQSKFLFEAKTIQRMELLVLSTLKWRMQAITPFSFLDYFTR 214
++AK EE P DL V + + K I ME +LSTL+W + T + FL F +
Sbjct: 248 LMSAKYEEIWPPQVEDL-VDIADHAYSHKQILVMEKTILSTLEWYLTVPTHYVFLARFIK 306
Query: 215 KITDDD 220
D+
Sbjct: 307 ASIADE 312
>sp|Q0DJR9|CCA14_ORYSJ Cyclin-A1-4 OS=Oryza sativa subsp. japonica GN=CYCA1-4 PE=2 SV=2
Length = 356
Score = 71.6 bits (174), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 91/187 (48%), Gaps = 19/187 (10%)
Query: 78 ECHHLPHNDYLKRLRTGDLDLAARQEAVDWIAKVHSHFGFGPLCSYLTINYLDRFLSAYE 137
E P D+++ ++ ++D + R +DW+ +V + P YLT+NY+DR+LS+
Sbjct: 96 ETKKRPSTDFVETIQ-KNIDTSMRAVLIDWLVEVTEEYRLVPETLYLTVNYIDRYLSSKV 154
Query: 138 LPKGKVWMMQLLAVACLSLAAKMEETEVPLCLDLQVGQSKFLFEAKTIQRMELLVLSTLK 197
+ + K MQLL VACL +A+K EE P +L S + + +ME VL LK
Sbjct: 155 INRRK---MQLLGVACLLIASKYEEICPPQVEEL-CYISDNTYTKDEVLKMEASVLKYLK 210
Query: 198 WRMQAITPFSFLDYFTRKITDDDDDHHQTPLRALFCRSIQIITSSIKGIDFLEFK----- 252
+ M A T FL F R H+ P+ L + + + I + LE+
Sbjct: 211 FEMTAPTTKCFLRRFLRAA----QVCHEAPVLHL-----EFLANYIAELSLLEYSLICYV 261
Query: 253 PSEIAAA 259
PS IAA+
Sbjct: 262 PSLIAAS 268
>sp|Q8WNW2|CCND2_PIG G1/S-specific cyclin-D2 OS=Sus scrofa GN=CCND2 PE=2 SV=1
Length = 288
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 92/209 (44%), Gaps = 23/209 (11%)
Query: 65 LQSDECLALLLEKECHHLPHNDYLKRLRTGDLDLAARQEAVDWIAKVHSHFGFGPLCSYL 124
L D L LL E +LP Y K ++ D+ R+ W+ +V L
Sbjct: 21 LHDDRVLQNLLTIEERYLPQCSYFKCVQ-KDIQPYMRRMVATWMLEVCEEQKCEEEVFPL 79
Query: 125 TINYLDRFLSAYELPKGKVWMMQLLAVACLSLAAKMEETEVPLCLDLQVGQSKFLFEAKT 184
INYLDRFL+ PK +QLL C+ LA+K++ET +PL + + + +
Sbjct: 80 AINYLDRFLAGVPTPKTH---LQLLGAVCMFLASKLKET-IPLTAEKLCIYTDNSIKPQE 135
Query: 185 IQRMELLVLSTLKWRMQAITPFSFLDYFTRKITDDDD------DHHQTPLRALFCRSIQI 238
+ EL+VL LKW + A+TP F+++ RK+ ++ H QT
Sbjct: 136 LLEWELVVLGKLKWNLAAVTPHDFIEHILRKLPQPNEKLSLIRKHAQT-----------F 184
Query: 239 ITSSIKGIDFLEFKPSEIA-AAVAISVTG 266
I F + PS IA +V ++ G
Sbjct: 185 IALCATDFKFAMYPPSMIATGSVGAAICG 213
>sp|Q0P5D3|CCND2_BOVIN G1/S-specific cyclin-D2 OS=Bos taurus GN=CCND2 PE=2 SV=1
Length = 289
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 5/152 (3%)
Query: 65 LQSDECLALLLEKECHHLPHNDYLKRLRTGDLDLAARQEAVDWIAKVHSHFGFGPLCSYL 124
L D L LL E +LP Y K ++ D+ R+ W+ +V L
Sbjct: 21 LHDDRVLQNLLTIEERYLPQCSYFKCVQK-DIQPYMRRMVATWMLEVCEEQKCEEEVFPL 79
Query: 125 TINYLDRFLSAYELPKGKVWMMQLLAVACLSLAAKMEETEVPLCLDLQVGQSKFLFEAKT 184
INYLDRFL+ PK +QLL C+ LA+K++ET +PL + + + +
Sbjct: 80 AINYLDRFLAGVPTPKTH---LQLLGAVCMFLASKLKET-IPLTAEKLCIYTDNSIKPQE 135
Query: 185 IQRMELLVLSTLKWRMQAITPFSFLDYFTRKI 216
+ EL+VL LKW + A+TP F+++ RK+
Sbjct: 136 LLEWELVVLGKLKWNLAAVTPHDFIEHILRKL 167
>sp|P30283|CGS5_YEAST S-phase entry cyclin-5 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=CLB5 PE=1 SV=1
Length = 435
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 82/162 (50%), Gaps = 21/162 (12%)
Query: 67 SDECLALLLEKECHHLP-HNDYLKRLRTGDLDLAARQEAVDWIAKVHSHFGFGPLCSYLT 125
S E A L +E LP HN L + L + R VDW+ +VH F P +L+
Sbjct: 163 SAEIFAFLYRRELETLPSHNYLLDKTSKYYLRPSMRTILVDWLVEVHEKFQCYPETLFLS 222
Query: 126 INYLDRFLSAYELPKGKVWM--MQLLAVACLSLAAKMEETEVPLCLDLQVGQSKFLFEAK 183
IN +DRFL+ K KV M +QLLAV L +AAK EE +P ++ + ++ +
Sbjct: 223 INLMDRFLA-----KNKVTMNKLQLLAVTSLFIAAKFEEVNLP-----KLAEYAYITDGA 272
Query: 184 T----IQRMELLVLSTLKWRMQAITPFSFLDYFTRKITDDDD 221
I+ E+ +L++L++ + P +FL R+I+ DD
Sbjct: 273 ASKNDIKNAEMFMLTSLEFNIGWPNPLNFL----RRISKADD 310
>sp|P30284|CG21_EMENI G2/mitotic-specific cyclin-B OS=Emericella nidulans (strain FGSC A4
/ ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=nimE
PE=2 SV=1
Length = 478
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 89/192 (46%), Gaps = 15/192 (7%)
Query: 69 ECLALLLEKECHHLPHNDYLKRLRTGDLDLAARQEAVDWIAKVHSHFGFGPLCSYLTINY 128
E L E E LP+ DY+ DL+ R VDW+ +VH+ F P +L +N
Sbjct: 211 EIFDYLRELEMETLPNPDYIDH--QPDLEWKMRGILVDWLIEVHTRFRLLPETLFLAVNI 268
Query: 129 LDRFLSAYELPKGKVWMMQLLAVACLSLAAKMEETEVPLCLDLQVGQSKFLFEAKTIQRM 188
+DRFLSA + + +QL+ VA + +A+K EE P + + F K I
Sbjct: 269 IDRFLSAEVVALDR---LQLVGVAAMFIASKYEEVLSPHVANFSHVADE-TFSDKEILDA 324
Query: 189 ELLVLSTLKWRMQAITPFSFLDYFTRKITDDDDDHHQTPLRALFCRSIQIITSSIKGIDF 248
E +L+TL++ M P +FL R+I+ D+ QT + I ++ F
Sbjct: 325 ERHILATLEYNMSYPNPMNFL----RRISKADNYDIQTRTLGKYLMEISLLDHR-----F 375
Query: 249 LEFKPSEIAAAV 260
L + S+I AA
Sbjct: 376 LGYPQSQIGAAA 387
>sp|Q39069|CCB13_ARATH Cyclin-B1-3 OS=Arabidopsis thaliana GN=CYCB1-3 PE=2 SV=2
Length = 414
Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 64/120 (53%), Gaps = 4/120 (3%)
Query: 95 DLDLAARQEAVDWIAKVHSHFGFGPLCSYLTINYLDRFLSAYELPKGKVWMMQLLAVACL 154
++D R +DW+ +VH F P YLT+N +DRFLS +P+ + +QL+ V+ L
Sbjct: 185 EIDEKMRSILIDWLVEVHVKFDLSPETLYLTVNIIDRFLSLKTVPRRE---LQLVGVSAL 241
Query: 155 SLAAKMEETEVPLCLDLQVGQSKFLFEAKTIQRMELLVLSTLKWRMQAITPFSFLDYFTR 214
+A+K EE P DL V + + ++ I ME +L L+W + T + FL F +
Sbjct: 242 LIASKYEEIWPPQVNDL-VYVTDNSYNSRQILVMEKTILGNLEWYLTVPTQYVFLVRFIK 300
>sp|P25012|CCNB2_SOYBN G2/mitotic-specific cyclin S13-7 (Fragment) OS=Glycine max PE=2
SV=1
Length = 257
Score = 68.9 bits (167), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 75/148 (50%), Gaps = 9/148 (6%)
Query: 74 LLEKECHHLPHNDYLKRLRTGDLDLAARQEAVDWIAKVHSHFGFGPLCSYLTINYLDRFL 133
L+E E H PH DY+ +++ R VDW+ VH+ F YLTIN +DRFL
Sbjct: 8 LVENESH--PH-DYIDS--QPEINERMRAILVDWLIDVHTKFELSLETLYLTINIIDRFL 62
Query: 134 SAYELPKGKVWMMQLLAVACLSLAAKMEETEVPLCLDLQVGQSKFLFEAKTIQRMELLVL 193
+ +P+ + +QL+ ++ + +A+K EE P D V S + + I ME +L
Sbjct: 63 AVKTVPRRE---LQLVGISAMLMASKYEEIWPPEVNDF-VCLSDRAYTHEQILAMEKTIL 118
Query: 194 STLKWRMQAITPFSFLDYFTRKITDDDD 221
+ L+W + TPF FL F + D +
Sbjct: 119 NKLEWTLTVPTPFVFLVRFIKAAVPDQE 146
>sp|P30279|CCND2_HUMAN G1/S-specific cyclin-D2 OS=Homo sapiens GN=CCND2 PE=1 SV=1
Length = 289
Score = 68.9 bits (167), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 75/152 (49%), Gaps = 5/152 (3%)
Query: 65 LQSDECLALLLEKECHHLPHNDYLKRLRTGDLDLAARQEAVDWIAKVHSHFGFGPLCSYL 124
L+ D L LL E +LP Y K ++ D+ R+ W+ +V L
Sbjct: 21 LRDDRVLQNLLTIEERYLPQCSYFKCVQ-KDIQPYMRRMVATWMLEVCEEQKCEEEVFPL 79
Query: 125 TINYLDRFLSAYELPKGKVWMMQLLAVACLSLAAKMEETEVPLCLDLQVGQSKFLFEAKT 184
+NYLDRFL+ PK +QLL C+ LA+K++ET PL + + + +
Sbjct: 80 AMNYLDRFLAGVPTPKSH---LQLLGAVCMFLASKLKETS-PLTAEKLCIYTDNSIKPQE 135
Query: 185 IQRMELLVLSTLKWRMQAITPFSFLDYFTRKI 216
+ EL+VL LKW + A+TP F+++ RK+
Sbjct: 136 LLEWELVVLGKLKWNLAAVTPHDFIEHILRKL 167
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.134 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 121,318,621
Number of Sequences: 539616
Number of extensions: 4776967
Number of successful extensions: 11208
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 156
Number of HSP's successfully gapped in prelim test: 71
Number of HSP's that attempted gapping in prelim test: 10807
Number of HSP's gapped (non-prelim): 236
length of query: 342
length of database: 191,569,459
effective HSP length: 118
effective length of query: 224
effective length of database: 127,894,771
effective search space: 28648428704
effective search space used: 28648428704
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)