Citrus Sinensis ID: 045125

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340--
MAPSFDCVVSSLLCAEEDSSVFDDINGSVVDEFENDATWHHGNNRTQHRSRRFDDGGDMLLSLPLQSDECLALLLEKECHHLPHNDYLKRLRTGDLDLAARQEAVDWIAKVHSHFGFGPLCSYLTINYLDRFLSAYELPKGKVWMMQLLAVACLSLAAKMEETEVPLCLDLQVGQSKFLFEAKTIQRMELLVLSTLKWRMQAITPFSFLDYFTRKITDDDDDHHQTPLRALFCRSIQIITSSIKGIDFLEFKPSEIAAAVAISVTGETKTVVDTEKAISLLTQHVKKERVLKCIKMMNDSLISGSVKSATSASLATSFPQSPIGVLDAACLSYKSDESTVGS
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHccccccHHHHcccccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHcccccccccccEEEcccccccHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHcccccccHHHHHHHcccccHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccc
****FDCVVSSLLCAEEDSSVFDDINGSVVDEFENDATWHH*********RRFDDGGDMLLSLPLQSDECLALLLEKECHHLPHNDYLKRLRTGDLDLAARQEAVDWIAKVHSHFGFGPLCSYLTINYLDRFLSAYELPKGKVWMMQLLAVACLSLAAKMEETEVPLCLDLQVGQSKFLFEAKTIQRMELLVLSTLKWRMQAITPFSFLDYFTRKITDDDDDHHQTPLRALFCRSIQIITSSIKGIDFLEFKPSEIAAAVAISVTGETKTVVDTEKAISLLTQHVKKERVLKCIKMMNDSLI********************IGVLDAACLSY*********
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MAPSFDCVVSSLLCAEEDSSVFDDINGSVVDEFENDATWHHGNNRTQHRSRRFDDGGDMLLSLPLQSDECLALLLEKECHHLPHNDYLKRLRTGDLDLAARQEAVDWIAKVHSHFGFGPLCSYLTINYLDRFLSAYELPKGKVWMMQLLAVACLSLAAKMEETEVPLCLDLQVGQSKFLFEAKTIQRMELLVLSTLKWRMQAITPFSFLDYFTRKITDDDDDHHQTPLRALFCRSIQIITSSIKGIDFLEFKPSEIAAAVAISVTGETKTVVDTEKAISLLTQHVKKERVLKCIKMMNDSLISGSVKSATSASLATSFPQSPIGVLDAACLSYKSDESTVGS

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Cyclin-D4-1 May activate cell cycle in the root apical meristem (RAM) and promote embryonic root (radicle) protrusion.probableQ8LGA1
Cyclin-D4-1 probableQ6YXH8
Cyclin-D3-1 probableQ69QB8

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2W96, chain A
Confidence level:very confident
Coverage over the Query: 68-304
View the alignment between query and template
View the model in PyMOL
Template: 2JGZ, chain B
Confidence level:probable
Coverage over the Query: 88-320
View the alignment between query and template
View the model in PyMOL