Citrus Sinensis ID: 045127
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 508 | 2.2.26 [Sep-21-2011] | |||||||
| Q0WVM4 | 634 | Probable LRR receptor-lik | no | no | 0.767 | 0.615 | 0.263 | 1e-27 | |
| Q8RWW0 | 744 | Receptor-like serine/thre | no | no | 0.494 | 0.337 | 0.286 | 4e-26 | |
| Q9LFS4 | 638 | Protein NSP-INTERACTING K | no | no | 0.748 | 0.595 | 0.252 | 3e-25 | |
| Q8VYT3 | 648 | Probable LRR receptor-lik | no | no | 0.795 | 0.623 | 0.242 | 4e-24 | |
| Q8LPB4 | 1021 | Phytosulfokine receptor 1 | N/A | no | 0.635 | 0.316 | 0.254 | 2e-23 | |
| Q9SYQ8 | 980 | Receptor protein kinase C | no | no | 0.755 | 0.391 | 0.226 | 1e-22 | |
| O49545 | 1003 | Leucine-rich repeat recep | no | no | 0.75 | 0.379 | 0.232 | 2e-22 | |
| Q9LRP3 | 467 | Probable receptor-like pr | no | no | 0.631 | 0.687 | 0.258 | 9e-22 | |
| Q9M9E0 | 656 | L-type lectin-domain cont | no | no | 0.594 | 0.460 | 0.240 | 1e-21 | |
| Q8LEB6 | 484 | Probable receptor-like pr | no | no | 0.490 | 0.514 | 0.281 | 1e-21 |
| >sp|Q0WVM4|Y2239_ARATH Probable LRR receptor-like serine/threonine-protein kinase At2g23950 OS=Arabidopsis thaliana GN=At2g23950 PE=2 SV=1 | Back alignment and function desciption |
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Score = 124 bits (312), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 122/463 (26%), Positives = 202/463 (43%), Gaps = 73/463 (15%)
Query: 73 SRPKITPLYLSFNFFWKYCPLGIMSID------LSNNSLKGAFPIDVLLCTQIQALDLSY 126
S PK+ L LS N F P + + L+NNSL G FP + + LDLSY
Sbjct: 120 SLPKLQTLDLSNNRFSGEIPGSVNQLSNLQYLRLNNNSLSGPFPASLSQIPHLSFLDLSY 179
Query: 127 NQLSGDIP---VESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLHSGLFPGHH 183
N L G +P +F+V N S +S + SSS +
Sbjct: 180 NNLRGPVPKFPARTFNVAGNPLICKNSLPEICSGSISASPLSVSLRSSSGRRT------- 232
Query: 184 NYTIKAVILLVGFPIFVILMISCTGWLCFVRPDFLPRMLRRNHK-------------FTT 230
N A+ + +GF + VIL + G++ + + MLR + K FT
Sbjct: 233 NILAVALGVSLGFAVSVILSL---GFIWYRKKQRRLTMLRISDKQEEGLLGLGNLRSFTF 289
Query: 231 WMLKAATNGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLV 290
L AT+GFS K+++G +Y+G DGT V ++ K +F E +++
Sbjct: 290 RELHVATDGFSSKSILGAGGFGNVYRGKFGDGTVVAVKRLKDVNGTSGNSQFRTELEMIS 349
Query: 291 QFQHKNLIRVLGWNNSRRTRAIVTEWTNGGNVELWL-SESAPSWKHRLKVLIGVVEAMCY 349
H+NL+R++G+ S R +V + + G+V L ++ A W R K+ IG + Y
Sbjct: 350 LAVHRNLLRLIGYCASSSERLLVYPYMSNGSVASRLKAKPALDWNTRKKIAIGAARGLFY 409
Query: 350 LQEQW-PEVDY-DLRTGSVLLTDNLEPLISRFKI------EYQHRSTKY----------- 390
L EQ P++ + D++ ++LL + E ++ F + E H +T
Sbjct: 410 LHEQCDPKIIHRDVKAANILLDEYFEAVVGDFGLAKLLNHEDSHVTTAVRGTVGHIAPEY 469
Query: 391 -----------VYKFGLFLLEMITNRRPLEEFERG---EAGFIEYIR-MHYPENLQLVVD 435
V+ FG+ LLE+IT R L EF + + +E++R +H ++ +VD
Sbjct: 470 LSTGQSSEKTDVFGFGILLLELITGMRAL-EFGKSVSQKGAMLEWVRKLHKEMKVEELVD 528
Query: 436 ERMMLTENMFDQAEQG--LGLGLMCTDQPTGKLPSLVQIYNMI 476
+ T +D+ E G L + L+CT P + ++ M+
Sbjct: 529 RELGTT---YDRIEVGEMLQVALLCTQFLPAHRPKMSEVVQML 568
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Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1 |
| >sp|Q8RWW0|ALE2_ARATH Receptor-like serine/threonine-protein kinase ALE2 OS=Arabidopsis thaliana GN=ALE2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 119 bits (299), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 135/286 (47%), Gaps = 35/286 (12%)
Query: 228 FTTWMLKAATNGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECK 287
FT L+ AT+ FS K ++G+ +Y+G + DGT V +++ D R EF+ E +
Sbjct: 337 FTLSELEKATDRFSAKRVLGEGGFGRVYQGSMEDGTEVAVKLLTRDNQNRDR-EFIAEVE 395
Query: 288 LLVQFQHKNLIRVLGWNNSRRTRAIVTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAM 347
+L + H+NL++++G RTR ++ E + G+VE L E W RLK+ +G +
Sbjct: 396 MLSRLHHRNLVKLIGICIEGRTRCLIYELVHNGSVESHLHEGTLDWDARLKIALGAARGL 455
Query: 348 CYLQEQW-PEVDY-DLRTGSVLLTDNLEPLISRFKIE------YQHRSTKY--------- 390
YL E P V + D + +VLL D+ P +S F + QH ST+
Sbjct: 456 AYLHEDSNPRVIHRDFKASNVLLEDDFTPKVSDFGLAREATEGSQHISTRVMGTFGYVAP 515
Query: 391 -------------VYKFGLFLLEMITNRRPLEEFE-RGEAGFIEYIR--MHYPENLQLVV 434
VY +G+ LLE++T RRP++ + GE + + R + E L+ +V
Sbjct: 516 EYAMTGHLLVKSDVYSYGVVLLELLTGRRPVDMSQPSGEENLVTWARPLLANREGLEQLV 575
Query: 435 DERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAY 480
D + T N FD + + MC Q P + ++ + Y
Sbjct: 576 DPALAGTYN-FDDMAKVAAIASMCVHQEVSHRPFMGEVVQALKLIY 620
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Required during the differentiation of the protoderm into shoots epidermis and cuticle. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9LFS4|NIK1_ARATH Protein NSP-INTERACTING KINASE 1 OS=Arabidopsis thaliana GN=NIK1 PE=1 SV=1 | Back alignment and function description |
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Score = 117 bits (292), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 120/475 (25%), Positives = 211/475 (44%), Gaps = 95/475 (20%)
Query: 76 KITPLYLSFNFFWKYCPLGI------MSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQL 129
++ L LS NFF P + + L+NNSL G FP+ + TQ+ LDLSYN L
Sbjct: 130 RLETLDLSDNFFHGEIPFSVGYLQSLQYLRLNNNSLSGVFPLSLSNMTQLAFLDLSYNNL 189
Query: 130 SGDIP---VESFSVLAN--------------LTFLNLSYNHFSEMKVSDTKFFQRFNSSS 172
SG +P ++FS++ N T + +S M ++ T S
Sbjct: 190 SGPVPRFAAKTFSIVGNPLICPTGTEPDCNGTTLIPMS------MNLNQTGVPLYAGGSR 243
Query: 173 FLHSGLFPGHHNYTIKAVILLVGFPIFVILMISCTGWLCFVRPDFLPRMLRRNH------ 226
+ G T+ + + VG ++ W + + NH
Sbjct: 244 NHKMAIAVGSSVGTVSLIFIAVGLFLW---------WRQRHNQNTFFDVKDGNHHEEVSL 294
Query: 227 ----KFTTWMLKAATNGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYK--GDVSREIRD 280
+F L+ ATN FS KNL+GK +YKGIL D T V ++ K G + EI
Sbjct: 295 GNLRRFGFRELQIATNNFSSKNLLGKGGYGNVYKGILGDSTVVAVKRLKDGGALGGEI-- 352
Query: 281 EFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWTNGGNVELWL-SESAPSWKHRLKV 339
+F E +++ H+NL+R+ G+ ++ + +V + + G+V + ++ W R ++
Sbjct: 353 QFQTEVEMISLAVHRNLLRLYGFCITQTEKLLVYPYMSNGSVASRMKAKPVLDWSIRKRI 412
Query: 340 LIGVVEAMCYLQEQW-PEVDY-DLRTGSVLLTDNLEPLISRFKI---------------- 381
IG + YL EQ P++ + D++ ++LL D E ++ F +
Sbjct: 413 AIGAARGLVYLHEQCDPKIIHRDVKAANILLDDYCEAVVGDFGLAKLLDHQDSHVTTAVR 472
Query: 382 --------EY----QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAG-----FIEYI-R 423
EY Q V+ FG+ LLE++T +R FE G+A ++++ +
Sbjct: 473 GTVGHIAPEYLSTGQSSEKTDVFGFGILLLELVTGQRA---FEFGKAANQKGVMLDWVKK 529
Query: 424 MHYPENLQLVVDERMMLTENMFDQAE--QGLGLGLMCTDQPTGKLPSLVQIYNMI 476
+H + L+L+VD+ +L + +D+ E + + + L+CT G P + ++ M+
Sbjct: 530 IHQEKKLELLVDKE-LLKKKSYDEIELDEMVRVALLCTQYLPGHRPKMSEVVRML 583
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Involved in defense response to geminivirus infection via regulation of the nuclear trafficking of RPL10A. Phosphorylates RPL10A in vitro. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q8VYT3|Y4052_ARATH Probable LRR receptor-like serine/threonine-protein kinase At4g30520 OS=Arabidopsis thaliana GN=At4g30520 PE=2 SV=1 | Back alignment and function description |
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Score = 113 bits (282), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 117/482 (24%), Positives = 199/482 (41%), Gaps = 78/482 (16%)
Query: 95 IMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHF 154
+ ++DLSNN G P+ + + +Q L L+ N LSG P S S + +L+FL+LSYN+
Sbjct: 127 LQTLDLSNNRFSGDIPVSIDQLSSLQYLRLNNNSLSGPFPA-SLSQIPHLSFLDLSYNNL 185
Query: 155 S---------EMKVSDTKFFQRFNSSSFLHSGL----------FPGHHNYTIKAVILLVG 195
S V+ R N + A+ L V
Sbjct: 186 SGPVPKFPARTFNVAGNPLICRSNPPEICSGSINASPLSVSLSSSSGRRSNRLAIALSVS 245
Query: 196 FPIFVILMISCTGWLCFVRPDFLPRMLRRNHK-------------FTTWMLKAATNGFSK 242
VIL+++ + + + +L N K FT L T+GFS
Sbjct: 246 LGSVVILVLALGSFCWYRKKQRRLLILNLNDKQEEGLQGLGNLRSFTFRELHVYTDGFSS 305
Query: 243 KNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLG 302
KN++G +Y+G L DGT V ++ K +F E +++ HKNL+R++G
Sbjct: 306 KNILGAGGFGNVYRGKLGDGTMVAVKRLKDINGTSGDSQFRMELEMISLAVHKNLLRLIG 365
Query: 303 WNNSRRTRAIVTEWTNGGNVELWL-SESAPSWKHRLKVLIGVVEAMCYLQEQW-PEVDY- 359
+ + R +V + G+V L S+ A W R ++ IG + YL EQ P++ +
Sbjct: 366 YCATSGERLLVYPYMPNGSVASKLKSKPALDWNMRKRIAIGAARGLLYLHEQCDPKIIHR 425
Query: 360 DLRTGSVLLTDNLEPLISRFKI------------------------EY----QHRSTKYV 391
D++ ++LL + E ++ F + EY Q V
Sbjct: 426 DVKAANILLDECFEAVVGDFGLAKLLNHADSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 485
Query: 392 YKFGLFLLEMITNRRPLE--EFERGEAGFIEYIR-MHYPENLQLVVDERMMLTENMFDQA 448
+ FG+ LLE+IT R LE + + +E++R +H ++ ++D + +D+
Sbjct: 486 FGFGILLLELITGLRALEFGKTVSQKGAMLEWVRKLHEEMKVEELLDRELGTN---YDKI 542
Query: 449 EQG--LGLGLMCTDQPTGKLPSLVQIYNMITRAYKSCPILTSENHRKSHADGGHGHKRVQ 506
E G L + L+CT P + ++ M+ + S NH + H +
Sbjct: 543 EVGEMLQVALLCTQYLPAHRPKMSEVVLMLEGDGLAERWAASHNHSHFY------HANIS 596
Query: 507 FK 508
FK
Sbjct: 597 FK 598
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q8LPB4|PSKR1_DAUCA Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR PE=1 SV=1 | Back alignment and function description |
|---|
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 102/401 (25%), Positives = 178/401 (44%), Gaps = 78/401 (19%)
Query: 98 IDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEM 157
++L NN+L G P ++ T ++ LDLS+N LSG+IP S L+ L+ +++YN S
Sbjct: 562 LNLKNNNLSGNIPANLSGMTSLEVLDLSHNNLSGNIP-PSLVKLSFLSTFSVAYNKLSGP 620
Query: 158 KVSDTKFFQRFNSSSFLHSGLFPGH-----------HNYTIKA-------VILLVGF--- 196
+ +F NSS + GL H H +K+ V + VG
Sbjct: 621 IPTGVQFQTFPNSSFEGNQGLCGEHASPCHITDQSPHGSAVKSKKNIRKIVAVAVGTGLG 680
Query: 197 PIFVILMISCTGWLCFVRPDFLPRMLR-------------------RNHKFTTWMLKAAT 237
+F++ + R + P N++ + + +T
Sbjct: 681 TVFLLTVTLLIILRTTSRGEVDPEKKADADEIELGSRSVVLFHNKDSNNELSLDDILKST 740
Query: 238 NGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNL 297
+ F++ N++G +YK L DGT+V I+ GD + R EF E + L + QH NL
Sbjct: 741 SSFNQANIIGCGGFGLVYKATLPDGTKVAIKRLSGDTGQMDR-EFQAEVETLSRAQHPNL 799
Query: 298 IRVLGWNNSRRTRAIVTEWTNGGNVELWLSESA---PS--WKHRLKVLIGVVEAMCYLQE 352
+ +LG+ N + + ++ + + G+++ WL E PS WK RL++ G E + YL +
Sbjct: 800 VHLLGYCNYKNDKLLIYSYMDNGSLDYWLHEKVDGPPSLDWKTRLRIARGAAEGLAYLHQ 859
Query: 353 QW-PEVDY-DLRTGSVLLTDNLEPLISRFKI------------------------EYQHR 386
P + + D+++ ++LL+D ++ F + EY
Sbjct: 860 SCEPHILHRDIKSSNILLSDTFVAHLADFGLARLILPYDTHVTTDLVGTLGYIPPEYGQA 919
Query: 387 STKY----VYKFGLFLLEMITNRRPLEEFE-RGEAGFIEYI 422
S VY FG+ LLE++T RRP++ + RG I ++
Sbjct: 920 SVATYKGDVYSFGVVLLELLTGRRPMDVCKPRGSRDLISWV 960
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Phytosulfokine receptor with a serine/threonine-protein kinase activity. Regulates, in response to phytosulfokine binding, a signaling cascade involved in plant cell differentiation, organogenesis and somatic embryogenesis. Daucus carota (taxid: 4039) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9SYQ8|CLV1_ARATH Receptor protein kinase CLAVATA1 OS=Arabidopsis thaliana GN=CLV1 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 104/460 (22%), Positives = 192/460 (41%), Gaps = 76/460 (16%)
Query: 95 IMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHF 154
++S+DLS N + G P + + L++S NQL+G IP + +LT L+LS+N
Sbjct: 530 LISVDLSRNRINGEIPKGINNVKNLGTLNISGNQLTGSIPT-GIGNMTSLTTLDLSFNDL 588
Query: 155 SEMKVSDTKFFQRFNSSSFLHSGLF-----------PGH---HNYTIKAVILLVGFPIFV 200
S +V F FN +SF + PG HN+T L V
Sbjct: 589 SG-RVPLGGQFLVFNETSFAGNTYLCLPHRVSCPTRPGQTSDHNHTA-----LFSPSRIV 642
Query: 201 ILMISCTGWLCFVRPDFLPRMLRRNHKFTTWMLKA----------ATNGFSKKNLVGKNE 250
I +I+ L + ++N K W L A ++N++GK
Sbjct: 643 ITVIAAITGLILISVAIRQMNKKKNQKSLAWKLTAFQKLDFKSEDVLECLKEENIIGKGG 702
Query: 251 GAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTR 310
+Y+G + + V I+ G + F E + L + +H++++R+LG+ ++ T
Sbjct: 703 AGIVYRGSMPNNVDVAIKRLVGRGTGRSDHGFTAEIQTLGRIRHRHIVRLLGYVANKDTN 762
Query: 311 AIVTEWTNGGNVELWLSESAPS---WKHRLKVLIGVVEAMCYLQEQWPE--VDYDLRTGS 365
++ E+ G++ L S W+ R +V + + +CYL + D+++ +
Sbjct: 763 LLLYEYMPNGSLGELLHGSKGGHLQWETRHRVAVEAAKGLCYLHHDCSPLILHRDVKSNN 822
Query: 366 VLLTDNLEPLISRFKI------------------EYQHRSTKY-----------VYKFGL 396
+LL + E ++ F + Y + + +Y VY FG+
Sbjct: 823 ILLDSDFEAHVADFGLAKFLVDGAASECMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGV 882
Query: 397 FLLEMITNRRPLEEFERGEAGFIEYIR-----MHYPENLQLV---VDERMMLTENMFDQA 448
LLE+I ++P+ EF G + ++R + P + +V VD R LT
Sbjct: 883 VLLELIAGKKPVGEFGEG-VDIVRWVRNTEEEITQPSDAAIVVAIVDPR--LTGYPLTSV 939
Query: 449 EQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSCPILTS 488
+ +MC ++ P++ ++ +M+T KS L +
Sbjct: 940 IHVFKIAMMCVEEEAAARPTMREVVHMLTNPPKSVANLIA 979
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Involved in the detection of CLV3 and CLV3-like peptides, that act as extracellular signals regulating meristem maintenance. Acts with CLV3 as a ligand-receptor pair in a signal transduction pathway coordinating growth between adjacent meristematic regions and controlling the balance between meristem cell proliferation and differentiation. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|O49545|BAME1_ARATH Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 OS=Arabidopsis thaliana GN=BAM1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 104/448 (23%), Positives = 190/448 (42%), Gaps = 67/448 (14%)
Query: 98 IDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEM 157
+DLS N L G P ++ + L+LS N L G IP S S + +LT L+ SYN+ S +
Sbjct: 532 VDLSRNELSGEIPNEITAMKILNYLNLSRNHLVGSIP-GSISSMQSLTSLDFSYNNLSGL 590
Query: 158 KVSDTKFFQRFNSSSFL-------------HSGLFPGHHNYTIKAVILLVGFPIFVILMI 204
V T F FN +SFL G+ G H K + + V+ ++
Sbjct: 591 -VPGTGQFSYFNYTSFLGNPDLCGPYLGPCKDGVAKGGHQSHSKGPLSASMKLLLVLGLL 649
Query: 205 SCTGWLCFVRPDFLPRMLRRNHKFTTWMLKA----------ATNGFSKKNLVGKNEGAAI 254
C+ V R L++ + W L A + + N++GK +
Sbjct: 650 VCSIAFAVVA-IIKARSLKKASESRAWRLTAFQRLDFTCDDVLDSLKEDNIIGKGGAGIV 708
Query: 255 YKGILRDGTRVKIEIYKGDVSREIRDE-FVEECKLLVQFQHKNLIRVLGWNNSRRTRAIV 313
YKG++ +G V ++ D F E + L + +H++++R+LG+ ++ T +V
Sbjct: 709 YKGVMPNGDLVAVKRLAAMSRGSSHDHGFNAEIQTLGRIRHRHIVRLLGFCSNHETNLLV 768
Query: 314 TEWTNGGNVELWLSESAPS---WKHRLKVLIGVVEAMCYLQEQWPE--VDYDLRTGSVLL 368
E+ G++ L W R K+ + + +CYL V D+++ ++LL
Sbjct: 769 YEYMPNGSLGEVLHGKKGGHLHWDTRYKIALEAAKGLCYLHHDCSPLIVHRDVKSNNILL 828
Query: 369 TDNLEPLISRFKI------------------EYQHRSTKY-----------VYKFGLFLL 399
N E ++ F + Y + + +Y VY FG+ LL
Sbjct: 829 DSNFEAHVADFGLAKFLQDSGTSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLL 888
Query: 400 EMITNRRPLEEFERGEAGFIEYIRMHYPEN---LQLVVDERMMLTENMFDQAEQGLGLGL 456
E++T R+P+ EF G ++++R N + V+D R L+ + + +
Sbjct: 889 ELVTGRKPVGEFGDG-VDIVQWVRKMTDSNKDSVLKVLDPR--LSSIPIHEVTHVFYVAM 945
Query: 457 MCTDQPTGKLPSLVQIYNMITRAYKSCP 484
+C ++ + P++ ++ ++T K P
Sbjct: 946 LCVEEQAVERPTMREVVQILTEIPKLPP 973
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Necessary for male gametophyte development, as well as ovule specification and function. Involved in cell-cell communication process required during early anther development, and regulating cell division and differentiation to organize cell layers. Required for the development of high-ordered vascular strands within the leaf and a correlated control of leaf shape, size and symmetry. May regulate the CLV1-dependent CLV3-mediated signaling in meristems maintenance. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9LRP3|Y3174_ARATH Probable receptor-like protein kinase At3g17420 OS=Arabidopsis thaliana GN=At3g17420 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 105 bits (262), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 102/395 (25%), Positives = 175/395 (44%), Gaps = 74/395 (18%)
Query: 150 SYNHFSEMKVSDTKFFQRFNSS----SFLHSGLFPGHHNYTIKAVILLVGFPIFVILMIS 205
SY E V D + +F+ S + S L P + T + +L G P +S
Sbjct: 82 SYQTLDEKFVEDIENGDKFSGSLEKKPLVGSHLPPSTPSTTAPSPLL--GLP-----EVS 134
Query: 206 CTGWLCFVRPDFLPRMLRRNHKFTTWMLKAATNGFSKKNLVGKNEGAAIYKGILRDGTRV 265
GW H FT L+ ATN FSK++++G +Y G L + T V
Sbjct: 135 HIGW---------------GHWFTLRDLQLATNHFSKESIIGDGGYGVVYHGTLTNKTPV 179
Query: 266 KIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWTNGGNVELW 325
++ + + +D F E + + +HKNL+R+LG+ R +V E+ N GN+E W
Sbjct: 180 AVKKLLNNPGQADKD-FRVEVEAIGHVRHKNLVRLLGYCVEGTHRMLVYEYMNNGNLEQW 238
Query: 326 L-----SESAPSWKHRLKVLIGVVEAMCYLQEQW-PEVDY-DLRTGSVLLTDNLEPLISR 378
L + +W+ R+KVL+G +A+ YL E P+V + D+++ ++L+ DN + +S
Sbjct: 239 LHGDMIHKGHLTWEARIKVLVGTAKALAYLHEAIEPKVVHRDIKSSNILMDDNFDAKLSD 298
Query: 379 FKI------EYQHRSTKY----------------------VYKFGLFLLEMITNRRPLEE 410
F + + + ST+ VY +G+ LLE IT R P++
Sbjct: 299 FGLAKLLGADSNYVSTRVMGTFGYVAPEYANSGLLNEKSDVYSYGVVLLEAITGRYPVDY 358
Query: 411 FE-RGEAGFIEYIR-MHYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPS 468
+ E +E+++ M + + VVD+ + + + ++ L L C D K P
Sbjct: 359 ARPKEEVHMVEWLKLMVQQKQFEEVVDKELEIKPTT-SELKRALLTALRCVDPDADKRPK 417
Query: 469 LVQIYNMI-TRAYKSCPIL--------TSENHRKS 494
+ Q+ M+ + Y P +E HR+S
Sbjct: 418 MSQVARMLESDEYPVMPREERRRRRNQNAETHRES 452
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9M9E0|LRKS1_ARATH L-type lectin-domain containing receptor kinase S.1 OS=Arabidopsis thaliana GN=LECRKS1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/370 (24%), Positives = 161/370 (43%), Gaps = 68/370 (18%)
Query: 156 EMKVSDTKFFQRFNSSSFLHSGLFPGHHNYTIKAVILLVGFPIFVILMISCTGWLCFVR- 214
E+ ++ F NSSS L +G G +++G +FV L I G+L + +
Sbjct: 280 EINTTNLPVFFLENSSSSLSTGAIAG----------IVIGCVVFVAL-IGFGGYLIWKKL 328
Query: 215 -------------PDFLPRMLRRNHKFTTWMLKAATNGFSKKNLVGKNEGAAIYKGILRD 261
+F P H+F+ L AAT FS L+G +Y+GIL +
Sbjct: 329 MREEEEEEIEEWELEFWP------HRFSYEELAAATEVFSNDRLLGSGGFGKVYRGILSN 382
Query: 262 GTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWTNGGN 321
+ + ++ D + +R EF+ E + + QHKNL+++ GW + +V ++ G+
Sbjct: 383 NSEIAVKCVNHDSKQGLR-EFMAEISSMGRLQHKNLVQMRGWCRRKNELMLVYDYMPNGS 441
Query: 322 VELWL----SESAPSWKHRLKVLIGVVEAMCYLQEQWPEV--DYDLRTGSVLLTDNLEPL 375
+ W+ E P W+ R +V+ V E + YL W +V D+++ ++LL +
Sbjct: 442 LNQWIFDNPKEPMP-WRRRRQVINDVAEGLNYLHHGWDQVVIHRDIKSSNILLDSEMRGR 500
Query: 376 ISRFKIE--YQH--------------------------RSTKYVYKFGLFLLEMITNRRP 407
+ F + Y+H VY FG+ +LE+++ RRP
Sbjct: 501 LGDFGLAKLYEHGGAPNTTRVVGTLGYLAPELASASAPTEASDVYSFGVVVLEVVSGRRP 560
Query: 408 LEEFERGEAGFIEYIRMHYPENLQL-VVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKL 466
+E E + ++++R Y + DER+ ++ E L LGL C K
Sbjct: 561 IEYAEEEDMVLVDWVRDLYGGGRVVDAADERVRSECETMEEVELLLKLGLACCHPDPAKR 620
Query: 467 PSLVQIYNMI 476
P++ +I +++
Sbjct: 621 PNMREIVSLL 630
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q8LEB6|Y5185_ARATH Probable receptor-like protein kinase At5g18500 OS=Arabidopsis thaliana GN=At5g18500 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 137/288 (47%), Gaps = 39/288 (13%)
Query: 226 HKFTTWMLKAATNGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEE 285
H FT L+ ATN FS+ N++G +Y+G L +GT V ++ ++ + +D F E
Sbjct: 152 HWFTLRDLQMATNQFSRDNIIGDGGYGVVYRGNLVNGTPVAVKKLLNNLGQADKD-FRVE 210
Query: 286 CKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWTNGGNVELWLSESAP-----SWKHRLKVL 340
+ + +HKNL+R+LG+ R +V E+ N GN+E WL +W+ R+K+L
Sbjct: 211 VEAIGHVRHKNLVRLLGYCMEGTQRMLVYEYVNNGNLEQWLRGDNQNHEYLTWEARVKIL 270
Query: 341 IGVVEAMCYLQEQ-WPEVDY-DLRTGSVLLTDNLEPLISRFKI----------------- 381
IG +A+ YL E P+V + D+++ ++L+ D IS F +
Sbjct: 271 IGTAKALAYLHEAIEPKVVHRDIKSSNILIDDKFNSKISDFGLAKLLGADKSFITTRVMG 330
Query: 382 -------EYQHRS----TKYVYKFGLFLLEMITNRRPLEEFER--GEAGFIEYIRMHYPE 428
EY + VY FG+ LLE IT R P+ ++ R E +E+++M +
Sbjct: 331 TFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPV-DYARPPPEVHLVEWLKMMVQQ 389
Query: 429 NLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMI 476
V + + T+ ++ L L C D + K P + Q+ M+
Sbjct: 390 RRSEEVVDPNLETKPSTSALKRTLLTALRCVDPMSEKRPRMSQVARML 437
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 508 | ||||||
| 255586235 | 532 | ATP binding protein, putative [Ricinus c | 0.992 | 0.947 | 0.699 | 0.0 | |
| 225444191 | 541 | PREDICTED: probable LRR receptor-like se | 0.996 | 0.935 | 0.654 | 0.0 | |
| 224117888 | 504 | predicted protein [Populus trichocarpa] | 0.944 | 0.952 | 0.684 | 0.0 | |
| 358348171 | 539 | Cysteine-rich receptor-like protein kina | 1.0 | 0.942 | 0.623 | 0.0 | |
| 356510750 | 527 | PREDICTED: brassinosteroid LRR receptor | 0.968 | 0.933 | 0.644 | 0.0 | |
| 449515943 | 519 | PREDICTED: probable LRR receptor-like pr | 0.966 | 0.946 | 0.617 | 1e-177 | |
| 449435930 | 519 | PREDICTED: probable LRR receptor-like pr | 0.966 | 0.946 | 0.613 | 1e-176 | |
| 15233404 | 518 | leucine-rich repeat protein kinase-like | 0.948 | 0.930 | 0.591 | 1e-167 | |
| 297799982 | 517 | leucine-rich repeat family protein [Arab | 0.948 | 0.932 | 0.594 | 1e-165 | |
| 359482092 | 1100 | PREDICTED: probable LRR receptor-like se | 0.803 | 0.370 | 0.242 | 3e-31 |
| >gi|255586235|ref|XP_002533772.1| ATP binding protein, putative [Ricinus communis] gi|223526309|gb|EEF28617.1| ATP binding protein, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 770 bits (1987), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/505 (69%), Positives = 425/505 (84%), Gaps = 1/505 (0%)
Query: 1 TVVEDLNNLHPPPDFNSTIMNNCIHNPSLKYCNSSSPMDLNEIFKSTIVASHLCNESKNP 60
TVVEDL NL PPPDFNST+ NC+HNPS +YCNSS P+DLN+IFKSTIVASHLCNESKNP
Sbjct: 26 TVVEDLANLKPPPDFNSTLKKNCLHNPSHRYCNSS-PIDLNDIFKSTIVASHLCNESKNP 84
Query: 61 NCVESFPKIDLRSRPKITPLYLSFNFFWKYCPLGIMSIDLSNNSLKGAFPIDVLLCTQIQ 120
NCVESFPKIDLR+RPKI PLYLS+NFFWKYCPL I+SIDLSNNSLKG FP+DVLLCTQIQ
Sbjct: 85 NCVESFPKIDLRNRPKIVPLYLSYNFFWKYCPLSILSIDLSNNSLKGGFPMDVLLCTQIQ 144
Query: 121 ALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLHSGLFP 180
ALDLS N L GD+PVESF LANLTFLNLSYN+FSE ++SD++FF+RFN+SSF+HSGL P
Sbjct: 145 ALDLSVNSLIGDVPVESFGPLANLTFLNLSYNYFSESRMSDSQFFKRFNASSFVHSGLNP 204
Query: 181 GHHNYTIKAVILLVGFPIFVILMISCTGWLCFVRPDFLPRMLRRNHKFTTWMLKAATNGF 240
H NY +KA+ LLVGFPI VILM+ C GWLCF+RPD+LP++L+R H+FT M++AATN F
Sbjct: 205 SHKNYKMKAIFLLVGFPISVILMVVCFGWLCFLRPDYLPKILQRKHRFTPAMIRAATNRF 264
Query: 241 SKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRV 300
S+KNLV K EG +YKG LRDGT+V+IEIY ++SRE R +F+EECK+LVQ HKNL++V
Sbjct: 265 SRKNLVVKGEGVEMYKGSLRDGTKVRIEIYLDNISREDRRKFIEECKVLVQLSHKNLVQV 324
Query: 301 LGWNNSRRTRAIVTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYD 360
+GW R RAI+ EWT G NVE+WLS SAP+WK RLK+L+GVVE MCYLQEQWP+V +D
Sbjct: 325 VGWCGDRELRAIIAEWTEGNNVEMWLSGSAPTWKQRLKILMGVVEGMCYLQEQWPDVGFD 384
Query: 361 LRTGSVLLTDNLEPLISRFKIEYQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIE 420
LRT SVLL++NL+PLISRFK+ ++ +TK +YK+G+FLLEMITN+RP E+FE GEAGFI
Sbjct: 385 LRTSSVLLSENLDPLISRFKVGAKNSNTKNIYKYGIFLLEMITNKRPQEDFETGEAGFIG 444
Query: 421 YIRMHYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAY 480
YIRM YPENL+ V+D RM L+ENM DQA+ G+GLGLMCTDQ T K PSL QI++M+ R Y
Sbjct: 445 YIRMSYPENLRKVIDARMKLSENMIDQAKHGIGLGLMCTDQSTSKYPSLNQIFSMLARVY 504
Query: 481 KSCPILTSENHRKSHADGGHGHKRV 505
+SC +L S+ H +H DG GH R
Sbjct: 505 QSCLVLASQGHGTAHGDGAKGHSRA 529
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225444191|ref|XP_002269737.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At2g23950 [Vitis vinifera] gi|297740915|emb|CBI31097.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 696 bits (1795), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/507 (65%), Positives = 406/507 (80%), Gaps = 1/507 (0%)
Query: 1 TVVEDLNNLHPPPDFNSTIMNNCIHNPSLKYCNSSSPMDLNEIFKSTIVASHLCNESKNP 60
+VVEDLNNLHPP DFNSTI NNC++NPSL+YCNSSSP+DL EIFKSTIVASHLCNES+NP
Sbjct: 33 SVVEDLNNLHPPSDFNSTINNNCLNNPSLRYCNSSSPLDLIEIFKSTIVASHLCNESRNP 92
Query: 61 NCVESFPKIDLRSRPKITPLYLSFNFFWKYCPLGIMSIDLSNNSLKGAFPIDVLLCTQIQ 120
NCVE+FPKIDL SRPKI PLYLSF FFWKYCPL I+SI+LSNNS+KG FP DVL C+QIQ
Sbjct: 93 NCVETFPKIDLHSRPKIAPLYLSFTFFWKYCPLTILSINLSNNSIKGGFPSDVLQCSQIQ 152
Query: 121 ALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLHSGLFP 180
ALDLS+N LSGD+P++ FS L NLT LNLSYNHFSE ++SD++FF+RFNSSSFL SGL P
Sbjct: 153 ALDLSHNDLSGDVPIQGFSPLTNLTLLNLSYNHFSESRISDSQFFKRFNSSSFLRSGLVP 212
Query: 181 GHHNYTIKAVILLVGFPIFVILMISCTGWLCFVRPDFLPRMLRRN-HKFTTWMLKAATNG 239
H +TIK V+ L GFP+FVILM+ C GW+C RPDFLP +LR HKFT ML+AAT G
Sbjct: 213 DHQGFTIKVVVFLFGFPMFVILMVGCLGWMCIRRPDFLPAVLRGGKHKFTPAMLEAATGG 272
Query: 240 FSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIR 299
FS+ NLVGK+EG IY+G +RD ++V+IEIY+ ++S E R F EECK+LVQ HKN+++
Sbjct: 273 FSRNNLVGKSEGVDIYRGSVRDSSQVRIEIYRDEISGEGRRRFAEECKVLVQLCHKNIVQ 332
Query: 300 VLGWNNSRRTRAIVTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDY 359
V+GW ++RR RAIVTEWT G NVE+W++ SAP WK RLK+L+GV+EAM YLQEQWP+V Y
Sbjct: 333 VVGWCDNRRLRAIVTEWTEGENVEIWVARSAPPWKQRLKILMGVLEAMRYLQEQWPQVGY 392
Query: 360 DLRTGSVLLTDNLEPLISRFKIEYQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFI 419
DLRT S+LL+ N +PLISRF+I Q +T+ +YKFG +LEM+TN+RP EEFERGEA FI
Sbjct: 393 DLRTCSILLSKNRQPLISRFRIGDQISNTRKIYKFGTLVLEMVTNKRPREEFERGEAEFI 452
Query: 420 EYIRMHYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRA 479
E+IRMH+P + V+DERM T N DQA QG+G+GLMC D G PS IY M+ +
Sbjct: 453 EWIRMHHPGKVHKVIDERMKKTGNTVDQATQGIGIGLMCADLSRGWHPSFDLIYRMMCKL 512
Query: 480 YKSCPILTSENHRKSHADGGHGHKRVQ 506
SC + S +H++SH D G GH+R Q
Sbjct: 513 SDSCQVPASPDHKRSHGDRGEGHRRNQ 539
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224117888|ref|XP_002317693.1| predicted protein [Populus trichocarpa] gi|222860758|gb|EEE98305.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 690 bits (1781), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/482 (68%), Positives = 395/482 (81%), Gaps = 2/482 (0%)
Query: 1 TVVEDLNNLHPPPDFNSTIMNNCIHNPSLKYCNSSSPMDLNEIFKSTIVASHLCNESKNP 60
+VVEDL NL PP DFN+TIM NC HNPSL+YCNSSS MDL EIFK TIVASHLCNESKNP
Sbjct: 25 SVVEDLANLQPPSDFNTTIMKNCQHNPSLRYCNSSS-MDLKEIFKFTIVASHLCNESKNP 83
Query: 61 NCVESFPKIDLRSRPKITPLYLSFNFFWKYCPLGIMSIDLSNNSLKGAFPIDVLLCTQIQ 120
NCV SF IDLR+RPK+ PLYLS++FFWKYCPL I+SIDLSN SLKG+FP +V+ C QIQ
Sbjct: 84 NCVHSFDNIDLRNRPKMAPLYLSYSFFWKYCPLTILSIDLSNISLKGSFPKEVICCDQIQ 143
Query: 121 ALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLHSGLFP 180
ALDLS N L+G+ P+ESF+ L NLTFLNLSYN+FSE K+SD++FF+RFNSSSF+HSG+ P
Sbjct: 144 ALDLSLNGLTGEFPIESFAPLTNLTFLNLSYNYFSESKISDSQFFKRFNSSSFIHSGILP 203
Query: 181 GHHNYTIKAVILLVGFPIFVILMISCTGWLCFVRPDFLPRMLRRNHKFTTWMLKAATNGF 240
NYTIKA+ LLVGFPI VILM C GWLCF RPD+LPRM +R HKFT ML+AATNGF
Sbjct: 204 SDRNYTIKAIFLLVGFPICVILMAVCFGWLCFQRPDYLPRMFQRKHKFTPSMLRAATNGF 263
Query: 241 SKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRV 300
S+KN + ++EG IYKG LRD T+V+IEIY+G +SRE R EFVEECK+LV+ HKNL++V
Sbjct: 264 SRKNQMVRSEGVEIYKGTLRDSTQVRIEIYRGCISREKRKEFVEECKVLVELCHKNLVQV 323
Query: 301 LGWNNSRRTRAIVTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYD 360
LGW ++R RAIVTEWT+G +E+WLS SAP WK RLK+LIGVV+ M YLQE WPEV YD
Sbjct: 324 LGWCSNRNQRAIVTEWTDGETIEMWLSGSAPPWKQRLKMLIGVVDGMRYLQEHWPEVVYD 383
Query: 361 LRTGSVLLTDNLEPLISRFKIEYQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIE 420
LR SVLL+DN EPL+SRF++ Q+ + K ++KFG+FLLE+ITNRR +EFERGEAG IE
Sbjct: 384 LRINSVLLSDNHEPLLSRFQVGDQYSNNKKIHKFGIFLLEIITNRRS-QEFERGEAGLIE 442
Query: 421 YIRMHYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAY 480
Y+R +YP+NL V+D RM L ENMFDQA+ G+ LGLMCTDQ K PSL QI +MI + Y
Sbjct: 443 YVRDNYPKNLHKVIDARMKLPENMFDQAKHGIELGLMCTDQSISKHPSLNQISHMINKVY 502
Query: 481 KS 482
+S
Sbjct: 503 ES 504
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|358348171|ref|XP_003638122.1| Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|355504057|gb|AES85260.1| Cysteine-rich receptor-like protein kinase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 669 bits (1726), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/510 (62%), Positives = 393/510 (77%), Gaps = 2/510 (0%)
Query: 1 TVVEDLNNLHPPPDFNSTIMNNCIHNPSLKYCNSSSPMDLNEIFKSTIVASHLCNESKNP 60
TV+EDL NLH PPDFN+TI NNC+ NPSL+YC SS +DL+EIFK TIVASHLCNES NP
Sbjct: 30 TVLEDLKNLHKPPDFNTTIFNNCLKNPSLRYCTSSPMVDLDEIFKHTIVASHLCNESNNP 89
Query: 61 NCVESFPKIDLRSRPKITPLYLSFNFFWKYCPLGIMSIDLSNNSLKGAFPIDVLLCTQIQ 120
NCVESFPKIDLR+RP I LYLSF FFWKYCPL I SID SNNS+KG FP DVL CTQIQ
Sbjct: 90 NCVESFPKIDLRNRPNIASLYLSFTFFWKYCPLSIQSIDFSNNSIKGGFPNDVLYCTQIQ 149
Query: 121 ALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLHSGLFP 180
+LDL N+ SG+IP++SFS L NLTFLNLSYN FSE ++SD++FF++FN+SSFLHSG
Sbjct: 150 SLDLGINEFSGEIPIQSFSSLTNLTFLNLSYNCFSESEISDSQFFKKFNASSFLHSGALV 209
Query: 181 GHHNYTIKAVILLVGFPIFVILMISCTGWLCFVRPDFLPRMLR--RNHKFTTWMLKAATN 238
H +TIKA+ILLVGFPI VILM+ GWLCF RPDFLPR+L+ R + FT +L+AAT
Sbjct: 210 DHKKFTIKAIILLVGFPILVILMVIFLGWLCFQRPDFLPRILQSSRGYTFTPAILEAATC 269
Query: 239 GFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLI 298
GFS KNLVGK++ IYKG+LRD T VKIE+Y D+SR+ +FVEECK+L + HKNL+
Sbjct: 270 GFSNKNLVGKSDIVHIYKGVLRDATEVKIEMYWDDISRDSYHKFVEECKILSELNHKNLV 329
Query: 299 RVLGWNNSRRTRAIVTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVD 358
+VLGW R+ RAI+TEWT NVE+WLS ++PSW HR+KVL+GVVE M YL E+WPEVD
Sbjct: 330 KVLGWCKGRKFRAIITEWTEEENVEMWLSGASPSWNHRVKVLMGVVECMLYLHEEWPEVD 389
Query: 359 YDLRTGSVLLTDNLEPLISRFKIEYQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGF 418
YDL+T SVLL+D LEPLISRF++ ++ S + V KFG+FLLEMI N+ E+F+ +AGF
Sbjct: 390 YDLKTSSVLLSDKLEPLISRFQVGERNNSRRKVCKFGVFLLEMILNKSVQEDFDGDDAGF 449
Query: 419 IEYIRMHYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITR 478
I Y+R +Q +VDER+ +TE Q +Q L LGLMC DQ + + PSL QI+N++++
Sbjct: 450 ISYMRTLRLSEMQQMVDERINVTETTLHQVKQALSLGLMCIDQSSKEQPSLAQIFNIVSK 509
Query: 479 AYKSCPILTSENHRKSHADGGHGHKRVQFK 508
AYKS +L S NH+ H D GHK QF+
Sbjct: 510 AYKSNLVLPSANHKTFHGDKVMGHKHFQFR 539
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356510750|ref|XP_003524097.1| PREDICTED: brassinosteroid LRR receptor kinase-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 664 bits (1712), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/492 (64%), Positives = 384/492 (78%)
Query: 1 TVVEDLNNLHPPPDFNSTIMNNCIHNPSLKYCNSSSPMDLNEIFKSTIVASHLCNESKNP 60
+V+EDL NLH PPDFNSTI +NC+ NPSL+YC+SS +DL+EIFK TIVASHLCNESKNP
Sbjct: 26 SVLEDLKNLHQPPDFNSTIFSNCLKNPSLRYCSSSPMLDLDEIFKFTIVASHLCNESKNP 85
Query: 61 NCVESFPKIDLRSRPKITPLYLSFNFFWKYCPLGIMSIDLSNNSLKGAFPIDVLLCTQIQ 120
NCVESFPK+DLR+RP I PLYLSF+FFWKYCPL IMSIDLSNNS+KG FP DVL CTQIQ
Sbjct: 86 NCVESFPKVDLRNRPNIAPLYLSFDFFWKYCPLSIMSIDLSNNSMKGDFPTDVLYCTQIQ 145
Query: 121 ALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLHSGLFP 180
+LDLS N SGDIP++SFS L NLTFLNLSYN FSE K+SD++FF+RFNSSSFLHSG
Sbjct: 146 SLDLSINAFSGDIPIQSFSPLTNLTFLNLSYNCFSESKLSDSQFFKRFNSSSFLHSGALL 205
Query: 181 GHHNYTIKAVILLVGFPIFVILMISCTGWLCFVRPDFLPRMLRRNHKFTTWMLKAATNGF 240
+T+KA+ LLVGFPI VILM+ C WLCF RPDFLP L+R+ +FT +LKAATN F
Sbjct: 206 DQKRFTVKAIFLLVGFPILVILMVICFLWLCFQRPDFLPSKLQRSRRFTPAILKAATNDF 265
Query: 241 SKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRV 300
S K LVGK++ IYKGILRDGT VKIE+Y D+ R+ +FVEECK+L + HKNL+R
Sbjct: 266 SNKYLVGKSDVVHIYKGILRDGTEVKIEMYWDDIPRDSYRKFVEECKVLSKLHHKNLVRF 325
Query: 301 LGWNNSRRTRAIVTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYD 360
LGW SR+ RAI+TEWT NVE+WLS S P W HRLKVL+GVV M YLQE+WPEVDY+
Sbjct: 326 LGWCRSRKFRAIITEWTREENVEMWLSGSGPPWNHRLKVLMGVVACMRYLQEEWPEVDYE 385
Query: 361 LRTGSVLLTDNLEPLISRFKIEYQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIE 420
L T S+LL+DN+EPLISRFK+ Q+ + + ++ FG+FLLEMI +R+ EEF+ G+AGFI
Sbjct: 386 LNTSSILLSDNVEPLISRFKVGDQNSNRRKIHGFGVFLLEMILSRKVQEEFDGGDAGFIR 445
Query: 421 YIRMHYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAY 480
++R +L+ ++DERM +TE +F Q +Q L LGLMC DQ PSL I+N I RAY
Sbjct: 446 FMRTLNLADLKQMIDERMKVTETIFHQVKQALSLGLMCIDQSNSDKPSLAMIFNTIARAY 505
Query: 481 KSCPILTSENHR 492
K+ L S NHR
Sbjct: 506 KASHALPSANHR 517
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449515943|ref|XP_004165007.1| PREDICTED: probable LRR receptor-like protein kinase At1g51890-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 626 bits (1615), Expect = e-177, Method: Compositional matrix adjust.
Identities = 305/494 (61%), Positives = 378/494 (76%), Gaps = 3/494 (0%)
Query: 1 TVVEDLNNLHPPPDFNSTIMNNCIHNPSLKYCNSSSPMDLNEIFKSTIVASHLCNESKNP 60
+V+EDLN LHPP DFNSTI NC NPSL+YC S+SPMDL EIFKS+IVASHLCNES+NP
Sbjct: 27 SVIEDLNTLHPPLDFNSTISKNCHLNPSLRYC-SASPMDLIEIFKSSIVASHLCNESRNP 85
Query: 61 NCVESFPKIDLRSRPKITPLYLSFNFFWKYCPLGIMSIDLSNNSLKGAFPIDVLLCTQIQ 120
NCVESFPKIDLRSRPKI PLYLSF+FFWKYCPL I SIDLSNNSLKG+FP+DVL C QI+
Sbjct: 86 NCVESFPKIDLRSRPKIAPLYLSFHFFWKYCPLSIHSIDLSNNSLKGSFPVDVLECKQIE 145
Query: 121 ALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTK-FFQRFNSSSFLHSGLF 179
LDLS N+L G++P FS + NLTFLNLS N F+E K+SD + FF+RFNSSSF+ SGL
Sbjct: 146 VLDLSRNELDGEVPFRIFSDITNLTFLNLSNNKFTESKMSDLELFFKRFNSSSFISSGLL 205
Query: 180 PGHHNYTIKAVILLVGFPIFVILMISCTGWLCFVRPDFLPRMLRRNHKFTTWMLKAATNG 239
P H Y +KAVILL FPI VI+++ WLCF RPDFLPRMLRR HKFT ML+AAT G
Sbjct: 206 PDHRKYQMKAVILLFVFPILVIVVVWFLWWLCFHRPDFLPRMLRRKHKFTPAMLRAATGG 265
Query: 240 FSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIR 299
F KKNL+ K +G IY G+LRDGT V+IEIY +++RE R EF+EECK+L Q HKNL++
Sbjct: 266 FLKKNLIVKCKGVDIYSGVLRDGTEVRIEIYGNEIARESRKEFIEECKILTQLSHKNLVK 325
Query: 300 VLGWNNSRRTRAIVTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDY 359
+LGW +RR RAIV EW+ G +V++WLS S P WKHRLKV GV+E M YLQE+WP VDY
Sbjct: 326 LLGWCGNRRMRAIVIEWSEGESVDMWLSRSPPPWKHRLKVAKGVLEGMLYLQEEWPGVDY 385
Query: 360 DLRTGSVLLTDNLEPLISRFKIEYQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFI 419
DLRT S+LLT L PLISRFK+ +++ S+K +YKFG+ L EMI N + +E ++GE+ F+
Sbjct: 386 DLRTNSLLLTRKLVPLISRFKLGHRNSSSKNIYKFGVLLFEMIVNPQLRDEIKQGESDFV 445
Query: 420 EYIRMHYPENLQLVVDERMMLT-ENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITR 478
YI+M P NLQ V++E + L E+M +QA+ + L LMCTDQ +G P+L I++ +TR
Sbjct: 446 GYIKMQLPNNLQAVINEDIKLQRESMVNQAKAAINLALMCTDQSSGHQPNLKYIFDNVTR 505
Query: 479 AYKSCPILTSENHR 492
+ + +E R
Sbjct: 506 LLSNHKMHDTEEGR 519
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449435930|ref|XP_004135747.1| PREDICTED: probable LRR receptor-like protein kinase At1g51890-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 623 bits (1606), Expect = e-176, Method: Compositional matrix adjust.
Identities = 303/494 (61%), Positives = 377/494 (76%), Gaps = 3/494 (0%)
Query: 1 TVVEDLNNLHPPPDFNSTIMNNCIHNPSLKYCNSSSPMDLNEIFKSTIVASHLCNESKNP 60
+V+EDLN LHPP DFNSTI NC NPSL+YC S+SPMDL EIFKS+IVASHLCNES+NP
Sbjct: 27 SVIEDLNTLHPPLDFNSTISKNCHLNPSLRYC-SASPMDLIEIFKSSIVASHLCNESRNP 85
Query: 61 NCVESFPKIDLRSRPKITPLYLSFNFFWKYCPLGIMSIDLSNNSLKGAFPIDVLLCTQIQ 120
NCVESFPKIDLRSRPKI PLYLSF+FFWKYCPL I SIDLSNNSLKG+FP+DVL C QI+
Sbjct: 86 NCVESFPKIDLRSRPKIAPLYLSFHFFWKYCPLSIHSIDLSNNSLKGSFPVDVLECKQIE 145
Query: 121 ALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTK-FFQRFNSSSFLHSGLF 179
LDLS N+L G++P FS + NLT LNLS N F+E K+SD + FF+RFNSSSF+ SGL
Sbjct: 146 VLDLSRNELDGEVPFRIFSDITNLTVLNLSNNKFTESKMSDLELFFKRFNSSSFISSGLL 205
Query: 180 PGHHNYTIKAVILLVGFPIFVILMISCTGWLCFVRPDFLPRMLRRNHKFTTWMLKAATNG 239
P H Y +KAVILL FPI VI+++ WLCF RPDFLPRMLRR HKFT ML+AAT G
Sbjct: 206 PDHRKYQMKAVILLFVFPILVIVVVWFLWWLCFHRPDFLPRMLRRKHKFTPAMLRAATGG 265
Query: 240 FSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIR 299
F KKNL+ K +G IY G+LRDGT V+IEIY +++RE R EF++ECK+L Q HKNL++
Sbjct: 266 FLKKNLIVKCKGVDIYSGVLRDGTEVRIEIYGNEIARESRKEFIDECKILTQLSHKNLVK 325
Query: 300 VLGWNNSRRTRAIVTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDY 359
+LGW +RR RAIV EW+ G +V++WLS S P WKHRLKV GV+E M YLQE+WP VDY
Sbjct: 326 LLGWCGNRRMRAIVIEWSEGESVDMWLSRSPPPWKHRLKVAKGVLEGMLYLQEEWPGVDY 385
Query: 360 DLRTGSVLLTDNLEPLISRFKIEYQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFI 419
DLRT S+LLT L PLISRFK+ +++ S+K +YKFG+ L EMI N + +E ++GE+ F+
Sbjct: 386 DLRTNSLLLTRKLVPLISRFKLGHRNSSSKNIYKFGVLLFEMIVNPQLRDEIKQGESDFV 445
Query: 420 EYIRMHYPENLQLVVDERMMLT-ENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITR 478
YI+M P NLQ V++E + L E+M +QA+ + L LMCTDQ +G P+L I++ +TR
Sbjct: 446 GYIKMQLPNNLQAVINEDIKLQRESMVNQAKAAINLALMCTDQSSGHQPNLKYIFDNVTR 505
Query: 479 AYKSCPILTSENHR 492
+ + +E R
Sbjct: 506 LLSNHKMHDTEEGR 519
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|15233404|ref|NP_193811.1| leucine-rich repeat protein kinase-like protein [Arabidopsis thaliana] gi|5262219|emb|CAB45845.1| putative protein [Arabidopsis thaliana] gi|7268875|emb|CAB79079.1| putative protein [Arabidopsis thaliana] gi|224589620|gb|ACN59343.1| leucine-rich repeat receptor-like protein kinase [Arabidopsis thaliana] gi|332658961|gb|AEE84361.1| leucine-rich repeat protein kinase-like protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 593 bits (1529), Expect = e-167, Method: Compositional matrix adjust.
Identities = 288/487 (59%), Positives = 361/487 (74%), Gaps = 5/487 (1%)
Query: 1 TVVEDLNNLHPPPDFNSTIMNNCIHNPSLKYCN--SSSPMDLNEIFKSTIVASHLCNESK 58
TVVEDL NL PPPDFN+TI NNC+ +P L+YCN SSSPMD+ EIF+STIVASHLCNESK
Sbjct: 27 TVVEDLANLSPPPDFNTTISNNCLRDPMLRYCNNTSSSPMDIVEIFRSTIVASHLCNESK 86
Query: 59 NPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCPLGIMSIDLSNNSLKGAFPIDVLLCTQ 118
NPNCVESFP+I + RPK LYLSF+FFWKYCPL ++ I+L NNSL FP +VL C Q
Sbjct: 87 NPNCVESFPRIRIHGRPKTAALYLSFDFFWKYCPLTVVDIELVNNSLTNGFPTNVLSCAQ 146
Query: 119 IQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLHSGL 178
I+ LDLSYNQ SG +PV+ S L NLT LNLSYN FSE K+SD++FF+RFN+SSF+ SG+
Sbjct: 147 IRTLDLSYNQFSGFVPVQDLSGLPNLTHLNLSYNRFSENKISDSEFFKRFNASSFIQSGV 206
Query: 179 FPGHHNYTIKAVILLVGFPIFVILMISCTGWLCFVRPDFLPRMLRRNHKFTTWMLKAATN 238
P Y +K ++LL+ FPI VIL+ C GWLC RPD+LPR RR +KFT ML+AAT+
Sbjct: 207 LPNVKRYKMKVLVLLIVFPIMVILLCFCFGWLCVKRPDYLPRTCRRRNKFTFAMLEAATD 266
Query: 239 GFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLI 298
FS ++LV + IYKG LRDGT KIE+YK VS E R EF E C+++ + +HKNL+
Sbjct: 267 EFSDQHLVSMSNTVDIYKGTLRDGTETKIEVYKEKVSSEKRREFAEVCEMVFKLRHKNLV 326
Query: 299 RVLGWNNSRRTRAIVTEWTNGGNVELWLSES-APSWKHRLKVLIGVVEAMCYLQEQWPEV 357
RVLGW NSR RA+VTEW G NVE WLS S A SW+ RL+V++GVVE +CYL +QWPE+
Sbjct: 327 RVLGWCNSRNMRALVTEWIQGENVETWLSSSMALSWRRRLRVVLGVVEGICYLSDQWPEI 386
Query: 358 DYDLRTGSVLLT-DNLEPLISRFKIEYQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEA 416
+DL T SVLL+ DN EPLIS FKI ++ + ++ FGLF +EMITN RP E E
Sbjct: 387 TFDLTTSSVLLSDDNQEPLISHFKIGDRNNLSTNIFNFGLFFVEMITNLRPDLGQEDSER 446
Query: 417 GFIEYIRMHYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTD-QPTGKLPSLVQIYNM 475
++EYIR+HYP+NL+ V+DE+M + FDQ +Q + LGLMCTD P K PSL QIY++
Sbjct: 447 RYLEYIRVHYPDNLERVIDEKMKIEGRTFDQVKQAITLGLMCTDIIPPLKQPSLTQIYDL 506
Query: 476 ITRAYKS 482
++ Y+S
Sbjct: 507 VSSLYES 513
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297799982|ref|XP_002867875.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp. lyrata] gi|297313711|gb|EFH44134.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 587 bits (1512), Expect = e-165, Method: Compositional matrix adjust.
Identities = 289/486 (59%), Positives = 364/486 (74%), Gaps = 4/486 (0%)
Query: 1 TVVEDLNNLHPPPDFNSTIMNNCIHNPSLKYCN--SSSPMDLNEIFKSTIVASHLCNESK 58
TVVEDL NL PPPDFN+TI NNC+ +P L+YCN SSSP+D+ EIF+STIVASHLCNESK
Sbjct: 27 TVVEDLANLSPPPDFNTTITNNCLRDPLLRYCNNTSSSPLDIVEIFRSTIVASHLCNESK 86
Query: 59 NPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCPLGIMSIDLSNNSLKGAFPIDVLLCTQ 118
NPNCVESFP+I + RPK LYLSF+FFWKYCPL ++ I+L NNSLK FP +VL C Q
Sbjct: 87 NPNCVESFPRIRIHGRPKTAALYLSFDFFWKYCPLTVVDIELVNNSLKNGFPTNVLSCAQ 146
Query: 119 IQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLHSGL 178
I+ LDLSYNQ SG +PV+ S L NLT LNLSYN FSE K+SD++FF+RFN+SSF+ SG+
Sbjct: 147 IRTLDLSYNQFSGFVPVQDLSGLPNLTHLNLSYNRFSENKISDSEFFKRFNASSFIQSGV 206
Query: 179 FPGHHNYTIKAVILLVGFPIFVILMISCTGWLCFVRPDFLPRMLRRNHKFTTWMLKAATN 238
P Y +K ++LL+ FPI VIL+ C GWLC RPD+LPR RR+HKFT ML+AAT+
Sbjct: 207 LPNVKRYKLKILVLLIVFPIMVILLCFCFGWLCIKRPDYLPRTCRRSHKFTFAMLEAATD 266
Query: 239 GFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLI 298
FS ++LV + IYKG LRDGT KIE+YK VS E R EF EEC+ + + +HKNL+
Sbjct: 267 EFSDQHLVSTSNTVDIYKGTLRDGTETKIEVYKEKVSSEKRREFAEECEAVFKLRHKNLL 326
Query: 299 RVLGWNNSRRTRAIVTEWTNGGNVE-LWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEV 357
RVLGW NSR RA+VTEW G NVE S SA SW+ RL+V++GVVE +CYL +QWPE+
Sbjct: 327 RVLGWCNSRNMRALVTEWIQGENVETWLSSSSALSWRRRLRVVLGVVEGICYLSDQWPEI 386
Query: 358 DYDLRTGSVLLT-DNLEPLISRFKIEYQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEA 416
+DL T SVLL+ DN +PLIS FK+ + + ++ FGLFL+EMITN RP E E E
Sbjct: 387 TFDLTTSSVLLSDDNQDPLISHFKVGDGNNLSTNIFNFGLFLVEMITNLRPDMEQEDSER 446
Query: 417 GFIEYIRMHYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMI 476
++EYIR+HYP+NL+ V+DE+M + E FDQ +Q + LGLMCTD+P K PSL QIY+++
Sbjct: 447 RYLEYIRVHYPDNLERVIDEKMKIDERTFDQVKQAITLGLMCTDKPPLKQPSLTQIYDLV 506
Query: 477 TRAYKS 482
+ Y+S
Sbjct: 507 SSLYES 512
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359482092|ref|XP_002271262.2| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 126/520 (24%), Positives = 223/520 (42%), Gaps = 112/520 (21%)
Query: 60 PNCVESFPKIDLRSRPKITPLYLSFNFFWKYCP--LG----IMSIDLSNNSLKGAFPIDV 113
P + SFP + T L LS+N P +G + ID+SNN L GA P V
Sbjct: 579 PKEIFSFPNL-------ATVLNLSWNSLSGSLPSEIGTLKMVQGIDISNNRLSGAIPTTV 631
Query: 114 LLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEM--KVSDTKFFQRFNSS 171
+C+ + LDLS N G IP +S L + +++LS N+ S + + K+ Q N S
Sbjct: 632 GVCSNLLYLDLSSNSFQGLIP-DSLEELRGIEYIDLSTNNLSALIPSLGTLKYLQLLNLS 690
Query: 172 SFLHSGLFPGHHNYTIKAVILLVGFP----------------------------IFVILM 203
+ G P ++ + + L G P + ++ +
Sbjct: 691 ANKLQGEVPKGGIFSNTSAVFLSGNPGLCGGLPVLELPNCPATGSRSSSSRTRKMLIVGL 750
Query: 204 ISCTGWLCFVRPDFLPRMLRRNHK-----------------FTTWMLKAATNGFSKKNLV 246
+ +C + F+ +++R K ++ ++LK+ATN FS +NL+
Sbjct: 751 TAGAAAMCILIVLFMFLIMKRKKKHDPTVTDVISFEGPPRLYSYYVLKSATNNFSSENLI 810
Query: 247 GKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNS 306
G+ +Y+G++RDGT ++++ D R F+ EC+ L +H+NL+++L +S
Sbjct: 811 GEGSFGCVYRGVMRDGTLAAVKVFNMDQHGASR-SFLAECEALRYVRHRNLVKILSACSS 869
Query: 307 RRTRAIVTEWTNGGNVELWLSESAP------SWKHRLKVLIGVVEAMCYLQE--QWPEVD 358
+A+V ++ G++E WL + K R+ +++ V AM YL + P V
Sbjct: 870 PTFKALVLQFMPNGSLEKWLHHGGEDGRQRLNLKQRMDIVVEVASAMEYLHHNCETPVVH 929
Query: 359 YDLRTGSVLLTDNLEPLISRFKI---------EYQHRST------------KY------- 390
DL+ +VLL ++ + F + ++Q ST +Y
Sbjct: 930 CDLKPSNVLLDQDMTAHVGDFGLARILHGAASDHQISSTLGLKGSIGYIAPEYGLGGGVS 989
Query: 391 ----VYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERM-----MLT 441
VY FG+ +LEM T ++P +E GE ++ P+ + +VD + +L
Sbjct: 990 TKGDVYCFGILVLEMFTGKKPTQEMFSGEFSLRRWVEAAVPDQVMGIVDNELEGDCKILG 1049
Query: 442 ENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMI--TRA 479
+ Q +GL C + P + + M+ TRA
Sbjct: 1050 VEYLNSVIQ---IGLSCASEKPEDRPDMKDVSAMMEKTRA 1086
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 508 | ||||||
| TAIR|locus:2121499 | 518 | AT4G20790 [Arabidopsis thalian | 0.948 | 0.930 | 0.591 | 4.4e-155 | |
| TAIR|locus:2146102 | 638 | NIK1 "NSP-interacting kinase 1 | 0.285 | 0.227 | 0.315 | 4.9e-26 | |
| TAIR|locus:2005498 | 1196 | BRI1 "BRASSINOSTEROID INSENSIT | 0.299 | 0.127 | 0.312 | 4.3e-25 | |
| TAIR|locus:2061466 | 634 | AT2G23950 [Arabidopsis thalian | 0.612 | 0.490 | 0.273 | 3e-24 | |
| TAIR|locus:2118811 | 648 | SARK "SENESCENCE-ASSOCIATED RE | 0.610 | 0.478 | 0.283 | 3.9e-23 | |
| TAIR|locus:2038992 | 744 | ALE2 "Abnormal Leaf Shape 2" [ | 0.328 | 0.224 | 0.329 | 5.7e-23 | |
| TAIR|locus:2051628 | 1008 | PSKR1 "phytosulfokin receptor | 0.281 | 0.141 | 0.291 | 1.8e-22 | |
| UNIPROTKB|Q8RZV7 | 1294 | P0413C03.22 "Putative extra sp | 0.289 | 0.113 | 0.296 | 2.5e-22 | |
| TAIR|locus:2093591 | 467 | GPK1 "glyoxysomal protein kina | 0.301 | 0.327 | 0.329 | 5.8e-22 | |
| TAIR|locus:2077730 | 512 | AT3G59110 [Arabidopsis thalian | 0.301 | 0.298 | 0.322 | 6.2e-22 |
| TAIR|locus:2121499 AT4G20790 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1512 (537.3 bits), Expect = 4.4e-155, P = 4.4e-155
Identities = 288/487 (59%), Positives = 361/487 (74%)
Query: 1 TVVEDLNNLHPPPDFNSTIMNNCIHNPSLKYCN--SSSPMDLNEIFKSTIVASHLCNESK 58
TVVEDL NL PPPDFN+TI NNC+ +P L+YCN SSSPMD+ EIF+STIVASHLCNESK
Sbjct: 27 TVVEDLANLSPPPDFNTTISNNCLRDPMLRYCNNTSSSPMDIVEIFRSTIVASHLCNESK 86
Query: 59 NPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCPLGIMSIDLSNNSLKGAFPIDVLLCTQ 118
NPNCVESFP+I + RPK LYLSF+FFWKYCPL ++ I+L NNSL FP +VL C Q
Sbjct: 87 NPNCVESFPRIRIHGRPKTAALYLSFDFFWKYCPLTVVDIELVNNSLTNGFPTNVLSCAQ 146
Query: 119 IQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLHSGL 178
I+ LDLSYNQ SG +PV+ S L NLT LNLSYN FSE K+SD++FF+RFN+SSF+ SG+
Sbjct: 147 IRTLDLSYNQFSGFVPVQDLSGLPNLTHLNLSYNRFSENKISDSEFFKRFNASSFIQSGV 206
Query: 179 FPGHHNYTIKAVILLVGFPIFVILMISCTGWLCFVRPDFLPRMLRRNHKFTTWMLKAATN 238
P Y +K ++LL+ FPI VIL+ C GWLC RPD+LPR RR +KFT ML+AAT+
Sbjct: 207 LPNVKRYKMKVLVLLIVFPIMVILLCFCFGWLCVKRPDYLPRTCRRRNKFTFAMLEAATD 266
Query: 239 GFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLI 298
FS ++LV + IYKG LRDGT KIE+YK VS E R EF E C+++ + +HKNL+
Sbjct: 267 EFSDQHLVSMSNTVDIYKGTLRDGTETKIEVYKEKVSSEKRREFAEVCEMVFKLRHKNLV 326
Query: 299 RVLGWNNSRRTRAIVTEWTNGGNVELWLSES-APSWKHRLKVLIGVVEAMCYLQEQWPEV 357
RVLGW NSR RA+VTEW G NVE WLS S A SW+ RL+V++GVVE +CYL +QWPE+
Sbjct: 327 RVLGWCNSRNMRALVTEWIQGENVETWLSSSMALSWRRRLRVVLGVVEGICYLSDQWPEI 386
Query: 358 DYDLRTGSVLLTD-NLEPLISRFKIEYQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEA 416
+DL T SVLL+D N EPLIS FKI ++ + ++ FGLF +EMITN RP E E
Sbjct: 387 TFDLTTSSVLLSDDNQEPLISHFKIGDRNNLSTNIFNFGLFFVEMITNLRPDLGQEDSER 446
Query: 417 GFIEYIRMHYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQ-PTGKLPSLVQIYNM 475
++EYIR+HYP+NL+ V+DE+M + FDQ +Q + LGLMCTD P K PSL QIY++
Sbjct: 447 RYLEYIRVHYPDNLERVIDEKMKIEGRTFDQVKQAITLGLMCTDIIPPLKQPSLTQIYDL 506
Query: 476 ITRAYKS 482
++ Y+S
Sbjct: 507 VSSLYES 513
|
|
| TAIR|locus:2146102 NIK1 "NSP-interacting kinase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 190 (71.9 bits), Expect = 4.9e-26, Sum P(3) = 4.9e-26
Identities = 48/152 (31%), Positives = 84/152 (55%)
Query: 233 LKAATNGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYK--GDVSREIRDEFVEECKLLV 290
L+ ATN FS KNL+GK +YKGIL D T V ++ K G + EI +F E +++
Sbjct: 305 LQIATNNFSSKNLLGKGGYGNVYKGILGDSTVVAVKRLKDGGALGGEI--QFQTEVEMIS 362
Query: 291 QFQHKNLIRVLGWNNSRRTRAIVTEWTNGGNVELWL-SESAPSWKHRLKVLIGVVEAMCY 349
H+NL+R+ G+ ++ + +V + + G+V + ++ W R ++ IG + Y
Sbjct: 363 LAVHRNLLRLYGFCITQTEKLLVYPYMSNGSVASRMKAKPVLDWSIRKRIAIGAARGLVY 422
Query: 350 LQEQW-PEVDY-DLRTGSVLLTDNLEPLISRF 379
L EQ P++ + D++ ++LL D E ++ F
Sbjct: 423 LHEQCDPKIIHRDVKAANILLDDYCEAVVGDF 454
|
|
| TAIR|locus:2005498 BRI1 "BRASSINOSTEROID INSENSITIVE 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 178 (67.7 bits), Expect = 4.3e-25, Sum P(3) = 4.3e-25
Identities = 50/160 (31%), Positives = 83/160 (51%)
Query: 227 KFTTWMLKAATNGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEEC 286
K T L ATNGF +L+G +YK IL+DG+ V I+ VS + EF+ E
Sbjct: 870 KLTFADLLQATNGFHNDSLIGSGGFGDVYKAILKDGSAVAIKKLI-HVSGQGDREFMAEM 928
Query: 287 KLLVQFQHKNLIRVLGWNNSRRTRAIVTEWTNGGNVELWLSESAPS-----WKHRLKVLI 341
+ + + +H+NL+ +LG+ R +V E+ G++E L + + W R K+ I
Sbjct: 929 ETIGKIKHRNLVPLLGYCKVGDERLLVYEFMKYGSLEDVLHDPKKAGVKLNWSTRRKIAI 988
Query: 342 GVVEAMCYLQEQW-PEVDY-DLRTGSVLLTDNLEPLISRF 379
G + +L P + + D+++ +VLL +NLE +S F
Sbjct: 989 GSARGLAFLHHNCSPHIIHRDMKSSNVLLDENLEARVSDF 1028
|
|
| TAIR|locus:2061466 AT2G23950 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 259 (96.2 bits), Expect = 3.0e-24, Sum P(2) = 3.0e-24
Identities = 95/347 (27%), Positives = 155/347 (44%)
Query: 58 KNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCPLGIMSID------LSNNSLKGAFPI 111
+N N P ++ S PK+ L LS N F P + + L+NNSL G FP
Sbjct: 106 QNNNISGKIPP-EICSLPKLQTLDLSNNRFSGEIPGSVNQLSNLQYLRLNNNSLSGPFPA 164
Query: 112 DVLLCTQIQALDLSYNQLSGDIP---VESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRF 168
+ + LDLSYN L G +P +F+V N S +S +
Sbjct: 165 SLSQIPHLSFLDLSYNNLRGPVPKFPARTFNVAGNPLICKNSLPEICSGSISASPLSVSL 224
Query: 169 NSSSFLHSGLFPGHHNYTIKAVILLVGFPIFVILMISCTGWLCFVRPDFLPRMLRRNHK- 227
SSS + N A+ + +GF + VIL + G++ + + MLR + K
Sbjct: 225 RSSSGRRT-------NILAVALGVSLGFAVSVILSL---GFIWYRKKQRRLTMLRISDKQ 274
Query: 228 ------------FTTWMLKAATNGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVS 275
FT L AT+GFS K+++G +Y+G DGT V ++ K
Sbjct: 275 EEGLLGLGNLRSFTFRELHVATDGFSSKSILGAGGFGNVYRGKFGDGTVVAVKRLKDVNG 334
Query: 276 REIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWTNGGNVELWL-SESAPSWK 334
+F E +++ H+NL+R++G+ S R +V + + G+V L ++ A W
Sbjct: 335 TSGNSQFRTELEMISLAVHRNLLRLIGYCASSSERLLVYPYMSNGSVASRLKAKPALDWN 394
Query: 335 HRLKVLIGVVEAMCYLQEQW-PEVDY-DLRTGSVLLTDNLEPLISRF 379
R K+ IG + YL EQ P++ + D++ ++LL + E ++ F
Sbjct: 395 TRKKIAIGAARGLFYLHEQCDPKIIHRDVKAANILLDEYFEAVVGDF 441
|
|
| TAIR|locus:2118811 SARK "SENESCENCE-ASSOCIATED RECEPTOR-LIKE KINASE" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 256 (95.2 bits), Expect = 3.9e-23, Sum P(2) = 3.9e-23
Identities = 99/349 (28%), Positives = 158/349 (45%)
Query: 58 KNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCPLGIMSID------LSNNSLKGAFPI 111
+N N P +L PK+ L LS N F P+ I + L+NNSL G FP
Sbjct: 109 QNNNISGKIPP-ELGFLPKLQTLDLSNNRFSGDIPVSIDQLSSLQYLRLNNNSLSGPFPA 167
Query: 112 DVLLCTQIQALDLSYNQLSGDIP---VESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRF 168
+ + LDLSYN LSG +P +F+V N + ++ +
Sbjct: 168 SLSQIPHLSFLDLSYNNLSGPVPKFPARTFNVAGNPLICRSNPPEICSGSINASPLSVSL 227
Query: 169 NSSSFLHSGLFPGHHNYTIKAVILLVGFPIFVILMISCTGWLCFVRPDFLPRM-LRRNHK 227
+SSS G + + A+ L V VIL+++ G C+ R + L N K
Sbjct: 228 SSSS--------GRRSNRL-AIALSVSLGSVVILVLAL-GSFCWYRKKQRRLLILNLNDK 277
Query: 228 -------------FTTWMLKAATNGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDV 274
FT L T+GFS KN++G +Y+G L DGT V ++ K D+
Sbjct: 278 QEEGLQGLGNLRSFTFRELHVYTDGFSSKNILGAGGFGNVYRGKLGDGTMVAVKRLK-DI 336
Query: 275 SREIRD-EFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWTNGGNVELWL-SESAPS 332
+ D +F E +++ HKNL+R++G+ + R +V + G+V L S+ A
Sbjct: 337 NGTSGDSQFRMELEMISLAVHKNLLRLIGYCATSGERLLVYPYMPNGSVASKLKSKPALD 396
Query: 333 WKHRLKVLIGVVEAMCYLQEQW-PEVDY-DLRTGSVLLTDNLEPLISRF 379
W R ++ IG + YL EQ P++ + D++ ++LL + E ++ F
Sbjct: 397 WNMRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANILLDECFEAVVGDF 445
|
|
| TAIR|locus:2038992 ALE2 "Abnormal Leaf Shape 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 242 (90.2 bits), Expect = 5.7e-23, Sum P(2) = 5.7e-23
Identities = 58/176 (32%), Positives = 93/176 (52%)
Query: 228 FTTWMLKAATNGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECK 287
FT L+ AT+ FS K ++G+ +Y+G + DGT V +++ D R EF+ E +
Sbjct: 337 FTLSELEKATDRFSAKRVLGEGGFGRVYQGSMEDGTEVAVKLLTRDNQNRDR-EFIAEVE 395
Query: 288 LLVQFQHKNLIRVLGWNNSRRTRAIVTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAM 347
+L + H+NL++++G RTR ++ E + G+VE L E W RLK+ +G +
Sbjct: 396 MLSRLHHRNLVKLIGICIEGRTRCLIYELVHNGSVESHLHEGTLDWDARLKIALGAARGL 455
Query: 348 CYLQEQW-PEVDY-DLRTGSVLLTDNLEPLISRFKIEY------QHRSTKYVYKFG 395
YL E P V + D + +VLL D+ P +S F + QH ST+ + FG
Sbjct: 456 AYLHEDSNPRVIHRDFKASNVLLEDDFTPKVSDFGLAREATEGSQHISTRVMGTFG 511
|
|
| TAIR|locus:2051628 PSKR1 "phytosulfokin receptor 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 187 (70.9 bits), Expect = 1.8e-22, Sum P(3) = 1.8e-22
Identities = 44/151 (29%), Positives = 79/151 (52%)
Query: 236 ATNGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHK 295
+TN F + N++G +YK L DG +V I+ GD +I EF E + L + QH
Sbjct: 730 STNSFDQANIIGCGGFGMVYKATLPDGKKVAIKKLSGDCG-QIEREFEAEVETLSRAQHP 788
Query: 296 NLIRVLGWNNSRRTRAIVTEWTNGGNVELWLSE--SAPS---WKHRLKVLIGVVEAMCYL 350
NL+ + G+ + R ++ + G+++ WL E P+ WK RL++ G + + YL
Sbjct: 789 NLVLLRGFCFYKNDRLLIYSYMENGSLDYWLHERNDGPALLKWKTRLRIAQGAAKGLLYL 848
Query: 351 QEQW-PEVDY-DLRTGSVLLTDNLEPLISRF 379
E P + + D+++ ++LL +N ++ F
Sbjct: 849 HEGCDPHILHRDIKSSNILLDENFNSHLADF 879
|
|
| UNIPROTKB|Q8RZV7 P0413C03.22 "Putative extra sporogenous cells" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
|---|
Score = 195 (73.7 bits), Expect = 2.5e-22, Sum P(3) = 2.5e-22
Identities = 46/155 (29%), Positives = 83/155 (53%)
Query: 232 MLKAATNGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQ 291
+LKA N FSK +++G +YK L +G RV I+ G + EF+ E + + +
Sbjct: 995 ILKATEN-FSKVHIIGDGGFGTVYKAALPEGRRVAIKRLHGGHQFQGDREFLAEMETIGK 1053
Query: 292 FQHKNLIRVLGWNNSRRTRAIVTEWTNGGNVELWLSESAPS-----WKHRLKVLIGVVEA 346
+H NL+ +LG+ R ++ E+ G++E+WL A + W RLK+ +G
Sbjct: 1054 VKHPNLVPLLGYCVCGDERFLIYEYMENGSLEMWLRNRADALEALGWPDRLKICLGSARG 1113
Query: 347 MCYLQEQW-PEVDY-DLRTGSVLLTDNLEPLISRF 379
+ +L + P + + D+++ ++LL +N EP +S F
Sbjct: 1114 LAFLHHGFVPHIIHRDMKSSNILLDENFEPRVSDF 1148
|
|
| TAIR|locus:2093591 GPK1 "glyoxysomal protein kinase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 222 (83.2 bits), Expect = 5.8e-22, Sum P(2) = 5.8e-22
Identities = 53/161 (32%), Positives = 91/161 (56%)
Query: 226 HKFTTWMLKAATNGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEE 285
H FT L+ ATN FSK++++G +Y G L + T V ++ + + +D F E
Sbjct: 140 HWFTLRDLQLATNHFSKESIIGDGGYGVVYHGTLTNKTPVAVKKLLNNPGQADKD-FRVE 198
Query: 286 CKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWTNGGNVELWLS-----ESAPSWKHRLKVL 340
+ + +HKNL+R+LG+ R +V E+ N GN+E WL + +W+ R+KVL
Sbjct: 199 VEAIGHVRHKNLVRLLGYCVEGTHRMLVYEYMNNGNLEQWLHGDMIHKGHLTWEARIKVL 258
Query: 341 IGVVEAMCYLQEQW-PEVDY-DLRTGSVLLTDNLEPLISRF 379
+G +A+ YL E P+V + D+++ ++L+ DN + +S F
Sbjct: 259 VGTAKALAYLHEAIEPKVVHRDIKSSNILMDDNFDAKLSDF 299
|
|
| TAIR|locus:2077730 AT3G59110 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 228 (85.3 bits), Expect = 6.2e-22, Sum P(2) = 6.2e-22
Identities = 52/161 (32%), Positives = 91/161 (56%)
Query: 226 HKFTTWMLKAATNGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEE 285
H FT L+ ATN F+ +N++G+ +YKG L +G V ++ ++ + EF E
Sbjct: 176 HWFTLRDLQLATNRFAAENVIGEGGYGVVYKGRLINGNDVAVKKLLNNLG-QAEKEFRVE 234
Query: 286 CKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWTNGGNVELWL-----SESAPSWKHRLKVL 340
+ + +HKNL+R+LG+ R +V E+ N GN+E WL +S +W+ R+K+L
Sbjct: 235 VEAIGHVRHKNLVRLLGYCIEGVNRMLVYEYVNSGNLEQWLHGAMGKQSTLTWEARMKIL 294
Query: 341 IGVVEAMCYLQEQW-PEVDY-DLRTGSVLLTDNLEPLISRF 379
+G +A+ YL E P+V + D++ ++L+ D+ +S F
Sbjct: 295 VGTAQALAYLHEAIEPKVVHRDIKASNILIDDDFNAKLSDF 335
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 508 | |||
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 1e-13 | |
| cd05085 | 250 | cd05085, PTKc_Fer, Catalytic domain of the Protein | 1e-10 | |
| cd00180 | 215 | cd00180, PKc, Catalytic domain of Protein Kinases | 1e-10 | |
| pfam07714 | 258 | pfam07714, Pkinase_Tyr, Protein tyrosine kinase | 3e-10 | |
| cd05039 | 256 | cd05039, PTKc_Csk_like, Catalytic domain of C-term | 8e-10 | |
| cd05063 | 268 | cd05063, PTKc_EphR_A2, Catalytic domain of the Pro | 2e-09 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 3e-09 | |
| cd05084 | 252 | cd05084, PTKc_Fes, Catalytic domain of the Protein | 7e-08 | |
| cd00192 | 262 | cd00192, PTKc, Catalytic domain of Protein Tyrosin | 2e-07 | |
| cd05148 | 261 | cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro | 2e-07 | |
| cd05033 | 266 | cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec | 2e-07 | |
| cd05041 | 251 | cd05041, PTKc_Fes_like, Catalytic domain of Fes-li | 4e-07 | |
| smart00221 | 258 | smart00221, STYKc, Protein kinase; unclassified sp | 9e-07 | |
| smart00219 | 257 | smart00219, TyrKc, Tyrosine kinase, catalytic doma | 9e-07 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 2e-06 | |
| cd05065 | 269 | cd05065, PTKc_EphR_B, Catalytic domain of the Prot | 2e-06 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 7e-06 | |
| cd05034 | 261 | cd05034, PTKc_Src_like, Catalytic domain of Src ki | 1e-05 | |
| pfam00069 | 260 | pfam00069, Pkinase, Protein kinase domain | 1e-05 | |
| cd05070 | 260 | cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro | 2e-05 | |
| cd05059 | 256 | cd05059, PTKc_Tec_like, Catalytic domain of Tec-li | 8e-05 | |
| cd05083 | 254 | cd05083, PTKc_Chk, Catalytic domain of the Protein | 1e-04 | |
| cd05066 | 267 | cd05066, PTKc_EphR_A, Catalytic domain of the Prot | 2e-04 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 2e-04 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 3e-04 | |
| cd05082 | 256 | cd05082, PTKc_Csk, Catalytic domain of the Protein | 3e-04 | |
| cd05113 | 256 | cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro | 5e-04 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 6e-04 | |
| cd05050 | 288 | cd05050, PTKc_Musk, Catalytic domain of the Protei | 6e-04 | |
| cd05097 | 295 | cd05097, PTKc_DDR_like, Catalytic domain of Discoi | 7e-04 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 9e-04 | |
| cd05064 | 266 | cd05064, PTKc_EphR_A10, Catalytic domain of the Pr | 0.001 | |
| cd05072 | 261 | cd05072, PTKc_Lyn, Catalytic domain of the Protein | 0.001 | |
| cd06606 | 260 | cd06606, STKc_MAPKKK, Catalytic domain of the Prot | 0.002 | |
| cd05037 | 259 | cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) dom | 0.002 | |
| cd05051 | 296 | cd05051, PTKc_DDR, Catalytic domain of the Protein | 0.003 | |
| COG4886 | 394 | COG4886, COG4886, Leucine-rich repeat (LRR) protei | 0.003 | |
| cd05096 | 304 | cd05096, PTKc_DDR1, Catalytic domain of the Protei | 0.003 | |
| cd05067 | 260 | cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro | 0.004 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 73.3 bits (180), Expect = 1e-13
Identities = 118/476 (24%), Positives = 190/476 (39%), Gaps = 100/476 (21%)
Query: 70 DLRSRPKITPLYLSFNFFWKYCPLG------IMSIDLSNNSLKGAFPIDVLLCTQIQALD 123
D ++ L LS N F P +M + LS N L G P ++ C ++ +LD
Sbjct: 470 DSFGSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLD 529
Query: 124 LSYNQLSGDIPVESFSVLANLTFLNLSYNHFS--------------EMKVSDTKF----- 164
LS+NQLSG IP SFS + L+ L+LS N S ++ +S
Sbjct: 530 LSHNQLSGQIP-ASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLP 588
Query: 165 ----FQRFNSSSFL----------HSGLFPGHHNYTIKAVILLVG--FPIFVILMISCTG 208
F N+S+ SGL P + + F++L + G
Sbjct: 589 STGAFLAINASAVAGNIDLCGGDTTSGLPPCKRVRKTPSWWFYITCTLGAFLVLALVAFG 648
Query: 209 WLCFVRPDFLPRMLRRNHKFTTWMLKAATNGFSKKN-----LVGKNEGAAIYKGILRDGT 263
F+R + R ++ TW L+ + SK L E I +G + G
Sbjct: 649 -FVFIRGRNNLELKRVENEDGTWELQFFDSKVSKSITINDILSSLKEENVISRG--KKGA 705
Query: 264 RVKIEIYKGDVS---REIRD-------EFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIV 313
K + K + +EI D E + KL QH N+++++G S + ++
Sbjct: 706 SYKGKSIKNGMQFVVKEINDVNSIPSSEIADMGKL----QHPNIVKLIGLCRSEKGAYLI 761
Query: 314 TEWTNGGNVELWLSE--SAPSWKHRLKVLIGVVEAMCYLQ----------EQWPE---VD 358
E+ G N LSE SW+ R K+ IG+ +A+ +L PE +D
Sbjct: 762 HEYIEGKN----LSEVLRNLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIID 817
Query: 359 YD----LRTG--SVLLTDNLEPLISRFKIEYQHRSTKY------VYKFGLFLLEMITNRR 406
LR +L TD + IS + + R TK +Y FGL L+E++T +
Sbjct: 818 GKDEPHLRLSLPGLLCTDT-KCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKS 876
Query: 407 PLEEFERGEAGFIEYIRMHYPE-NLQLVVDERMMLTENMFDQAE--QGLGLGLMCT 459
P + +E+ R Y + +L + +D + + +Q E + + L L CT
Sbjct: 877 PADAEFGVHGSIVEWARYCYSDCHLDMWIDP-SIRGDVSVNQNEIVEVMNLALHCT 931
|
Length = 968 |
| >gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Score = 61.6 bits (149), Expect = 1e-10
Identities = 49/210 (23%), Positives = 92/210 (43%), Gaps = 41/210 (19%)
Query: 245 LVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWN 304
L+GK ++KG L+D T V ++ K D+ +E++ +F+ E ++L Q+ H N+++++G
Sbjct: 2 LLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVC 61
Query: 305 NSRRTRAIVTEWTNGGNVELWLSESAPSWKHR--LKVLIGVVEAMCYLQEQWPEVDYDLR 362
R+ IV E GG+ +L + K + +K + M YL+ + + DL
Sbjct: 62 TQRQPIYIVMELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESK-NCIHRDLA 120
Query: 363 TGSVLLTDNLEPLISRFKIEYQ----------------------------HRSTKYVYKF 394
+ L+ +N IS F + Q + S V+ +
Sbjct: 121 ARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIPIKWTAPEALNYGRYSSESDVWSY 180
Query: 395 GLFLLEM----------ITNRRPLEEFERG 414
G+ L E +TN++ E+ E+G
Sbjct: 181 GILLWETFSLGVCPYPGMTNQQAREQVEKG 210
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250 |
| >gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Score = 60.7 bits (148), Expect = 1e-10
Identities = 26/111 (23%), Positives = 55/111 (49%), Gaps = 3/111 (2%)
Query: 246 VGKNEGAAIYKGILR-DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWN 304
+G+ +Y + G +V I+I K + S + +E + E ++L + H N++++ G
Sbjct: 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVF 60
Query: 305 NSRRTRAIVTEWTNGGNVELWLSESAP--SWKHRLKVLIGVVEAMCYLQEQ 353
+V E+ GG+++ L E+ S L++L+ ++E + YL
Sbjct: 61 EDENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSN 111
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215 |
| >gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase | Back alignment and domain information |
|---|
Score = 60.2 bits (147), Expect = 3e-10
Identities = 39/126 (30%), Positives = 65/126 (51%), Gaps = 8/126 (6%)
Query: 254 IYKGILRD-----GTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRR 308
+YKG L+ T+V ++ K S E R+EF+EE ++ + H N++R+LG
Sbjct: 15 VYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKLSHPNIVRLLGVCTQGE 74
Query: 309 TRAIVTEWTNGGNVELWL--SESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSV 366
IVTE+ GG++ +L + K L++ + + + M YL E V DL +
Sbjct: 75 PLYIVTEYMPGGDLLDFLRKHGEKLTLKDLLQMALQIAKGMEYL-ESKNFVHRDLAARNC 133
Query: 367 LLTDNL 372
L+T+NL
Sbjct: 134 LVTENL 139
|
Length = 258 |
| >gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 59.0 bits (143), Expect = 8e-10
Identities = 56/232 (24%), Positives = 93/232 (40%), Gaps = 42/232 (18%)
Query: 242 KKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVL 301
+GK E + G R G +V ++ K D + F+ E ++ +H NL+++L
Sbjct: 10 LGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST--AAQAFLAEASVMTTLRHPNLVQLL 66
Query: 302 GWNNSRRTRAIVTEWTNGGN-VELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVD 358
G IVTE+ G+ V+ S + + +L + V E M YL+E+ V
Sbjct: 67 GVVLQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEK-NFVH 125
Query: 359 YDLRTGSVLLTDNLEPLISRF----KIEYQHRSTKY--------------------VYKF 394
DL +VL++++L +S F + S K V+ F
Sbjct: 126 RDLAARNVLVSEDLVAKVSDFGLAKEASQGQDSGKLPVKWTAPEALREKKFSTKSDVWSF 185
Query: 395 GLFLLEMIT------NRRPLEEF-ERGEAGFIEYIRMHYPENLQLVVDERMM 439
G+ L E+ + R PL++ E G+ RM PE V + M
Sbjct: 186 GILLWEIYSFGRVPYPRIPLKDVVPHVEKGY----RMEAPEGCPPEVYKVMK 233
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256 |
| >gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Score = 58.1 bits (140), Expect = 2e-09
Identities = 39/148 (26%), Positives = 72/148 (48%), Gaps = 7/148 (4%)
Query: 238 NGFSKKNLVGKNEGAAIYKGIL----RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQ 293
+ +K+ ++G E +++GIL R V I+ K + + R +F+ E ++ QF
Sbjct: 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFS 64
Query: 294 HKNLIRVLGWNNSRRTRAIVTEWTNGGNVELWLSESAPSWK--HRLKVLIGVVEAMCYLQ 351
H N+IR+ G + I+TE+ G ++ +L + + + +L G+ M YL
Sbjct: 65 HHNIIRLEGVVTKFKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLS 124
Query: 352 EQWPEVDYDLRTGSVLLTDNLEPLISRF 379
+ V DL ++L+ NLE +S F
Sbjct: 125 DM-NYVHRDLAARNILVNSNLECKVSDF 151
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 59.1 bits (143), Expect = 3e-09
Identities = 27/59 (45%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 97 SIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFS 155
SI+LS NS++G P + T ++ LDLSYN +G IP ES L +L LNL+ N S
Sbjct: 446 SINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIP-ESLGQLTSLRILNLNGNSLS 503
|
Length = 623 |
| >gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Score = 53.1 bits (127), Expect = 7e-08
Identities = 39/156 (25%), Positives = 77/156 (49%), Gaps = 8/156 (5%)
Query: 246 VGKNEGAAIYKGILR-DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWN 304
+G+ ++ G LR D T V ++ + + +++ +F++E ++L Q+ H N++R++G
Sbjct: 3 IGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 62
Query: 305 NSRRTRAIVTEWTNGGNVELWLSESAPSWKHRLKVLIGVVE----AMCYLQEQWPEVDYD 360
++ IV E GG+ +L P + ++K LI +VE M YL+ + + D
Sbjct: 63 TQKQPIYIVMELVQGGDFLTFLRTEGP--RLKVKELIQMVENAAAGMEYLESKHC-IHRD 119
Query: 361 LRTGSVLLTDNLEPLISRFKIEYQHRSTKYVYKFGL 396
L + L+T+ IS F + + Y G+
Sbjct: 120 LAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGM 155
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252 |
| >gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 52.2 bits (126), Expect = 2e-07
Identities = 40/140 (28%), Positives = 67/140 (47%), Gaps = 15/140 (10%)
Query: 254 IYKGILRDG----TRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRT 309
+YKG L+ T V ++ K D S E R +F++E +++ + H N++R+LG
Sbjct: 11 VYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEP 70
Query: 310 RAIVTEWTNGGNVELWLSESAP----------SWKHRLKVLIGVVEAMCYLQEQWPEVDY 359
+V E+ GG++ +L +S P S K L I + + M YL + V
Sbjct: 71 LYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK-KFVHR 129
Query: 360 DLRTGSVLLTDNLEPLISRF 379
DL + L+ ++L IS F
Sbjct: 130 DLAARNCLVGEDLVVKISDF 149
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262 |
| >gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Score = 52.1 bits (125), Expect = 2e-07
Identities = 49/195 (25%), Positives = 84/195 (43%), Gaps = 34/195 (17%)
Query: 240 FSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIR 299
F+ + +G +++G+ ++ RV I+I K D + +F +E + L + +HK+LI
Sbjct: 8 FTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSD-DLLKQQDFQKEVQALKRLRHKHLIS 66
Query: 300 VLGWNNSRRTRAIVTEWTNGGNVELWLSESAPSWKHRLKVLIG----VVEAMCYLQEQWP 355
+ + I+TE G++ +L S + LI V E M YL+EQ
Sbjct: 67 LFAVCSVGEPVYIITELMEKGSLLAFLR-SPEGQVLPVASLIDMACQVAEGMAYLEEQ-N 124
Query: 356 EVDYDLRTGSVLLTDNLEPLISRF----------------KIEY----------QHRSTK 389
+ DL ++L+ ++L ++ F KI Y STK
Sbjct: 125 SIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSSDKKIPYKWTAPEAASHGTFSTK 184
Query: 390 Y-VYKFGLFLLEMIT 403
V+ FG+ L EM T
Sbjct: 185 SDVWSFGILLYEMFT 199
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261 |
| >gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 52.0 bits (125), Expect = 2e-07
Identities = 40/155 (25%), Positives = 73/155 (47%), Gaps = 7/155 (4%)
Query: 244 NLVGKNEGAAIYKGILRDGTR----VKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIR 299
++G E + +G L+ + V I+ K S + R +F+ E ++ QF H N+IR
Sbjct: 10 KVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIR 69
Query: 300 VLGWNNSRRTRAIVTEWTNGGNVELWLSESAP--SWKHRLKVLIGVVEAMCYLQEQWPEV 357
+ G R I+TE+ G+++ +L E+ + + +L G+ M YL E V
Sbjct: 70 LEGVVTKSRPVMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEM-NYV 128
Query: 358 DYDLRTGSVLLTDNLEPLISRFKIEYQHRSTKYVY 392
DL ++L+ NL +S F + + ++ Y
Sbjct: 129 HRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATY 163
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 50.9 bits (122), Expect = 4e-07
Identities = 36/154 (23%), Positives = 74/154 (48%), Gaps = 3/154 (1%)
Query: 245 LVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWN 304
+GK +YKG+L+ T V ++ + + +++ +F++E ++L Q+ H N+++++G
Sbjct: 2 KIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVC 61
Query: 305 NSRRTRAIVTEWTNGGNVELWLSESAPSWKHR--LKVLIGVVEAMCYLQEQWPEVDYDLR 362
++ IV E GG++ +L + + L++ + M YL E + DL
Sbjct: 62 VQKQPIYIVMELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYL-ESKNCIHRDLA 120
Query: 363 TGSVLLTDNLEPLISRFKIEYQHRSTKYVYKFGL 396
+ L+ +N IS F + + Y GL
Sbjct: 121 ARNCLVGENNVLKISDFGMSREEEGGIYTVSDGL 154
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251 |
| >gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Score = 49.9 bits (120), Expect = 9e-07
Identities = 38/140 (27%), Positives = 67/140 (47%), Gaps = 11/140 (7%)
Query: 250 EGA--AIYKGILRDG-----TRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLG 302
EGA +YKG L+ V ++ K D S + +EF+ E +++ + H N++++LG
Sbjct: 9 EGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNIVKLLG 68
Query: 303 WNNSRRTRAIVTEWTNGGNVELWLSESAP---SWKHRLKVLIGVVEAMCYLQEQWPEVDY 359
IV E+ GG++ +L ++ P S L + + M YL+ + +
Sbjct: 69 VCTEEEPLMIVMEYMPGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESK-NFIHR 127
Query: 360 DLRTGSVLLTDNLEPLISRF 379
DL + L+ +NL IS F
Sbjct: 128 DLAARNCLVGENLVVKISDF 147
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258 |
| >gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Score = 49.8 bits (120), Expect = 9e-07
Identities = 38/139 (27%), Positives = 67/139 (48%), Gaps = 10/139 (7%)
Query: 250 EGA--AIYKGILRD-----GTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLG 302
EGA +YKG L+ V ++ K D S + +EF+ E +++ + H N++++LG
Sbjct: 9 EGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNVVKLLG 68
Query: 303 WNNSRRTRAIVTEWTNGGNVELWLSESAP--SWKHRLKVLIGVVEAMCYLQEQWPEVDYD 360
IV E+ GG++ +L ++ P S L + + M YL+ + + D
Sbjct: 69 VCTEEEPLYIVMEYMEGGDLLSYLRKNRPKLSLSDLLSFALQIARGMEYLESK-NFIHRD 127
Query: 361 LRTGSVLLTDNLEPLISRF 379
L + L+ +NL IS F
Sbjct: 128 LAARNCLVGENLVVKISDF 146
|
Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 49.8 bits (119), Expect = 2e-06
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 95 IMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHF 154
I + L N L+G P D+ +Q+++LS N + G+IP S + +L L+LSYN F
Sbjct: 420 IDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPP-SLGSITSLEVLDLSYNSF 478
Query: 155 S 155
+
Sbjct: 479 N 479
|
Length = 623 |
| >gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Score = 49.5 bits (118), Expect = 2e-06
Identities = 36/141 (25%), Positives = 66/141 (46%), Gaps = 7/141 (4%)
Query: 245 LVGKNEGAAIYKGILRDGTR----VKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRV 300
++G E + +G L+ + V I+ K + + R +F+ E ++ QF H N+I +
Sbjct: 11 VIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHL 70
Query: 301 LGWNNSRRTRAIVTEWTNGGNVELWLSESAPSWK--HRLKVLIGVVEAMCYLQEQWPEVD 358
G R I+TE+ G ++ +L ++ + + +L G+ M YL E V
Sbjct: 71 EGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEM-NYVH 129
Query: 359 YDLRTGSVLLTDNLEPLISRF 379
DL ++L+ NL +S F
Sbjct: 130 RDLAARNILVNSNLVCKVSDF 150
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 48.3 bits (115), Expect = 7e-06
Identities = 25/61 (40%), Positives = 39/61 (63%)
Query: 95 IMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHF 154
++SIDLS ++ G + IQ ++LS NQLSG IP + F+ ++L +LNLS N+F
Sbjct: 71 VVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNF 130
Query: 155 S 155
+
Sbjct: 131 T 131
|
Length = 968 |
| >gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 46.5 bits (111), Expect = 1e-05
Identities = 54/219 (24%), Positives = 93/219 (42%), Gaps = 55/219 (25%)
Query: 254 IYKGILRDGTRVKIEIYK-GDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAI 312
++ G T+V ++ K G +S E F++E +++ + +H L+++ + I
Sbjct: 22 VWMGTWNGTTKVAVKTLKPGTMSPE---AFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYI 78
Query: 313 VTEWTNGGNVELWLSESAPSWKHRLKVLIG----VVEAMCYLQEQWPEVDYDLRTGSVLL 368
VTE+ + G++ +L K RL L+ + E M YL+ + + DL ++L+
Sbjct: 79 VTEYMSKGSLLDFLKSGEGK-KLRLPQLVDMAAQIAEGMAYLESR-NYIHRDLAARNILV 136
Query: 369 TDNLEPLISRFKI-------EYQHR-STKY--------------------VYKFGLFLLE 400
+NL I+ F + EY R K+ V+ FG+ L E
Sbjct: 137 GENLVCKIADFGLARLIEDDEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTE 196
Query: 401 MIT----------NRRPLEEFERGEAGFIEYIRMHYPEN 429
++T NR LE+ ERG Y RM P N
Sbjct: 197 IVTYGRVPYPGMTNREVLEQVERG------Y-RMPRPPN 228
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261 |
| >gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain | Back alignment and domain information |
|---|
Score = 46.1 bits (110), Expect = 1e-05
Identities = 23/119 (19%), Positives = 48/119 (40%), Gaps = 5/119 (4%)
Query: 240 FSKKNLVGKNEGAAIYKGILRDGTR---VKIEIYKGDVSREIRDEFVEECKLLVQFQHKN 296
+ +G +YK + + VKI + K + E ++L + H N
Sbjct: 1 YELLRKLGSGSFGTVYKAKHKGTGKIVAVKI-LKKRSEKSKKDQTARREIRILRRLSHPN 59
Query: 297 LIRVLGWNNSRRTRAIVTEWTNGGNVELWLSESAP-SWKHRLKVLIGVVEAMCYLQEQW 354
++R++ + +V E+ GG++ +LS P S K+ + ++ + YL
Sbjct: 60 IVRLIDAFEDKDHLYLVMEYCEGGDLFDYLSRGGPLSEDEAKKIALQILRGLEYLHSNG 118
|
Length = 260 |
| >gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Score = 46.1 bits (109), Expect = 2e-05
Identities = 55/236 (23%), Positives = 101/236 (42%), Gaps = 54/236 (22%)
Query: 246 VGKNEGAAIYKGILRDGTRVKIEIYK-GDVSREIRDEFVEECKLLVQFQHKNLIRVLGWN 304
+G + ++ G T+V ++ K G +S E F+EE +++ + +H L+++
Sbjct: 14 LGNGQFGEVWMGTWNGNTKVAVKTLKPGTMSPE---SFLEEAQIMKKLRHDKLVQLYAVV 70
Query: 305 NSRRTRAIVTEWTNGGNVELWLSES---APSWKHRLKVLIGVVEAMCYLQEQWPEVDYDL 361
S IVTE+ + G++ +L + A + + + V M Y+ E+ + DL
Sbjct: 71 -SEEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYI-ERMNYIHRDL 128
Query: 362 RTGSVLLTDNLEPLISRFKI-------EYQHRS-TKY--------------------VYK 393
R+ ++L+ D L I+ F + EY R K+ V+
Sbjct: 129 RSANILVGDGLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 188
Query: 394 FGLFLLEMIT----------NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMM 439
FG+ L E++T NR LE+ ERG RM P++ + + E M+
Sbjct: 189 FGILLTELVTKGRVPYPGMNNREVLEQVERG-------YRMPCPQDCPISLHELML 237
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260 |
| >gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 44.0 bits (104), Expect = 8e-05
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 10/79 (12%)
Query: 280 DEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWTNGGNVELWLSESAPSWKHRLK- 338
D+F+EE K++++ H NL+++ G +R IVTE+ G + +L E K +L
Sbjct: 44 DDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMANGCLLNYLRER----KGKLGT 99
Query: 339 -----VLIGVVEAMCYLQE 352
+ V EAM YL+
Sbjct: 100 EWLLDMCSDVCEAMEYLES 118
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256 |
| >gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Score = 43.4 bits (102), Expect = 1e-04
Identities = 39/139 (28%), Positives = 70/139 (50%), Gaps = 13/139 (9%)
Query: 246 VGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLG--W 303
+G+ E A+ +G G +V ++ K DV+ + F+EE ++ + HKNL+R+LG
Sbjct: 14 IGEGEFGAVLQGEYT-GQKVAVKNIKCDVTAQ---AFLEETAVMTKLHHKNLVRLLGVIL 69
Query: 304 NNSRRTRAIVTEWTNGGNVELWL---SESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYD 360
+N IV E + GN+ +L + S L+ + V E M YL+ + V D
Sbjct: 70 HNGLY---IVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESK-KLVHRD 125
Query: 361 LRTGSVLLTDNLEPLISRF 379
L ++L++++ +S F
Sbjct: 126 LAARNILVSEDGVAKVSDF 144
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254 |
| >gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Score = 42.6 bits (100), Expect = 2e-04
Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 3/117 (2%)
Query: 265 VKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWTNGGNVEL 324
V I+ K + + R +F+ E ++ QF H N+I + G + IVTE+ G+++
Sbjct: 35 VAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDA 94
Query: 325 WLSESAPSWK--HRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRF 379
+L + + + +L G+ M YL + V DL ++L+ NL +S F
Sbjct: 95 FLRKHDGQFTVIQLVGMLRGIASGMKYLSDM-GYVHRDLAARNILVNSNLVCKVSDF 150
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 38.7 bits (91), Expect = 2e-04
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 94 GIMSIDLSNNSLKGAFPIDVLL-CTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYN 152
+ S+DLSNN L P ++ LDLS N L+ I E+FS L +L L+LS N
Sbjct: 1 NLKSLDLSNNRLTV-IPDGAFKGLPNLKVLDLSGNNLTS-ISPEAFSGLPSLRSLDLSGN 58
Query: 153 HF 154
+
Sbjct: 59 NL 60
|
Length = 60 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 43.3 bits (102), Expect = 3e-04
Identities = 31/79 (39%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 80 LYLSFNFFWKYCPLGIMS----IDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPV 135
L LS N F P G + +DLSNN L G P D+ + ++ LDL N L G IP
Sbjct: 123 LNLSNNNFTGSIPRGSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPN 182
Query: 136 ESFSVLANLTFLNLSYNHF 154
S + L +L FL L+ N
Sbjct: 183 -SLTNLTSLEFLTLASNQL 200
|
Length = 968 |
| >gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Score = 42.3 bits (99), Expect = 3e-04
Identities = 42/148 (28%), Positives = 71/148 (47%), Gaps = 9/148 (6%)
Query: 246 VGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLG-WN 304
+GK E + G R G +V ++ K D + + F+ E ++ Q +H NL+++LG
Sbjct: 14 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQ---AFLAEASVMTQLRHSNLVQLLGVIV 69
Query: 305 NSRRTRAIVTEWTNGGNVELWLSESAPS---WKHRLKVLIGVVEAMCYLQEQWPEVDYDL 361
+ IVTE+ G++ +L S LK + V EAM YL E V DL
Sbjct: 70 EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL-EANNFVHRDL 128
Query: 362 RTGSVLLTDNLEPLISRFKIEYQHRSTK 389
+VL++++ +S F + + ST+
Sbjct: 129 AARNVLVSEDNVAKVSDFGLTKEASSTQ 156
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256 |
| >gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Score = 41.4 bits (97), Expect = 5e-04
Identities = 33/113 (29%), Positives = 55/113 (48%), Gaps = 6/113 (5%)
Query: 269 IYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWTNGGNVELWLSE 328
I +G +S DEF+EE K++++ H+ L+++ G +R IVTE+ + G + +L E
Sbjct: 36 IKEGSMSE---DEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSNGCLLNYLRE 92
Query: 329 SA--PSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRF 379
L++ V E M YL E + DL + L+ D +S F
Sbjct: 93 HGKRFQPSQLLEMCKDVCEGMAYL-ESKQFIHRDLAARNCLVDDQGCVKVSDF 144
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 42.1 bits (99), Expect = 6e-04
Identities = 24/58 (41%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 98 IDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFS 155
I L N+L G P ++ T + LDL YN L+G IP S L NL +L L N S
Sbjct: 217 IYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPS-SLGNLKNLQYLFLYQNKLS 273
|
Length = 968 |
| >gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Score = 41.4 bits (97), Expect = 6e-04
Identities = 34/157 (21%), Positives = 66/157 (42%), Gaps = 25/157 (15%)
Query: 260 RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWTNG 319
T V +++ K + S +++ +F E L+ +F H N++++LG + ++ E+
Sbjct: 33 EPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPMCLLFEYMAY 92
Query: 320 GNVELWLSESAPSWK-----------------------HRLKVLIGVVEAMCYLQEQWPE 356
G++ +L +P + +L + V M YL E+
Sbjct: 93 GDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER-KF 151
Query: 357 VDYDLRTGSVLLTDNLEPLISRFKIEYQHRSTKYVYK 393
V DL T + L+ +N+ I+ F + S Y YK
Sbjct: 152 VHRDLATRNCLVGENMVVKIADFGLSRNIYSADY-YK 187
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288 |
| >gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 41.1 bits (96), Expect = 7e-04
Identities = 18/64 (28%), Positives = 42/64 (65%)
Query: 265 VKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWTNGGNVEL 324
V +++ + DV++ R++F++E K++ + ++ N+IR+LG S ++TE+ G++
Sbjct: 47 VAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLGVCVSDDPLCMITEYMENGDLNQ 106
Query: 325 WLSE 328
+LS+
Sbjct: 107 FLSQ 110
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 41.8 bits (98), Expect = 9e-04
Identities = 39/121 (32%), Positives = 56/121 (46%), Gaps = 12/121 (9%)
Query: 41 NEIFKSTIVASHLCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCPLGIMS--- 97
++IF ++ +L N S N N S P+ S P + L LS N P I S
Sbjct: 111 DDIFTTSSSLRYL-NLSNN-NFTGSIPR---GSIPNLETLDLSNNMLSGEIPNDIGSFSS 165
Query: 98 ---IDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHF 154
+DL N L G P + T ++ L L+ NQL G IP E + +L ++ L YN+
Sbjct: 166 LKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRE-LGQMKSLKWIYLGYNNL 224
Query: 155 S 155
S
Sbjct: 225 S 225
|
Length = 968 |
| >gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Score = 40.7 bits (95), Expect = 0.001
Identities = 35/118 (29%), Positives = 52/118 (44%), Gaps = 3/118 (2%)
Query: 265 VKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWTNGGNVEL 324
V I + S + R F+ E L QF H N++R+ G T IVTE+ + G ++
Sbjct: 36 VAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIVTEYMSNGALDS 95
Query: 325 WLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFK 380
+L E + +L G+ M YL E V L VL+ +L IS F+
Sbjct: 96 FLRKHEGQLVAGQLMGMLPGLASGMKYLSEM-GYVHKGLAAHKVLVNSDLVCKISGFR 152
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Score = 40.4 bits (94), Expect = 0.001
Identities = 45/191 (23%), Positives = 81/191 (42%), Gaps = 38/191 (19%)
Query: 246 VGKNEGAAIYKGILRDGTRVKIEIYK-GDVSREIRDEFVEECKLLVQFQHKNLIRVLGWN 304
+G + ++ G + T+V ++ K G +S + F+EE L+ QH L+R+
Sbjct: 14 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQ---AFLEEANLMKTLQHDKLVRLYAVV 70
Query: 305 NSRRTRAIVTEWTNGGNVELWLSESAPSWKHRLKVLIG----VVEAMCYLQEQWPEVDYD 360
I+TE+ G++ +L K L LI + E M Y++ + + D
Sbjct: 71 TKEEPIYIITEYMAKGSLLDFLKSDEGG-KVLLPKLIDFSAQIAEGMAYIERK-NYIHRD 128
Query: 361 LRTGSVLLTDNLEPLISRFKI-------EYQHRS-TKY--------------------VY 392
LR +VL++++L I+ F + EY R K+ V+
Sbjct: 129 LRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVW 188
Query: 393 KFGLFLLEMIT 403
FG+ L E++T
Sbjct: 189 SFGILLYEIVT 199
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261 |
| >gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Score = 39.8 bits (94), Expect = 0.002
Identities = 20/88 (22%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 240 FSKKNLVGKNEGAAIYKGILRDGTR---VKIEIYKGDVSREIRDEFVEECKLLVQFQHKN 296
+++ L+G+ ++Y + +D VK + S E + E ++L QH N
Sbjct: 2 WTRGELLGRGSFGSVYLALDKDTGELMAVK-SVELSGDSEEELEALEREIRILSSLQHPN 60
Query: 297 LIRVLG--WNNSRRTRAIVTEWTNGGNV 322
++R G + + T I E+ +GG++
Sbjct: 61 IVRYYGSERDEEKNTLNIFLEYVSGGSL 88
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260 |
| >gnl|CDD|173627 cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 39.8 bits (93), Expect = 0.002
Identities = 28/110 (25%), Positives = 50/110 (45%), Gaps = 12/110 (10%)
Query: 254 IYKGILRDGTRVKIEIYKGDVSREIRD---------EFVEECKLLVQFQHKNLIRVLGWN 304
IYKG+LR + + I +VS ++ F E L+ Q HK+L+++ G
Sbjct: 11 IYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKHLVKLYGVC 70
Query: 305 NSRRTRAIVTEWTNGGNVELWL-SESAPSWKH-RLKVLIGVVEAMCYLQE 352
+V E+ G ++++L E H +L V + A+ YL++
Sbjct: 71 VRDEN-IMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLED 119
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 259 |
| >gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Score = 39.3 bits (92), Expect = 0.003
Identities = 15/67 (22%), Positives = 34/67 (50%)
Query: 265 VKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWTNGGNVEL 324
V +++ + D S R++F++E K+L + N+ R+LG ++ E+ G++
Sbjct: 49 VAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARLLGVCTVDPPLCMIMEYMENGDLNQ 108
Query: 325 WLSESAP 331
+L +
Sbjct: 109 FLQKHVA 115
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296 |
| >gnl|CDD|227223 COG4886, COG4886, Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Score = 39.6 bits (92), Expect = 0.003
Identities = 34/144 (23%), Positives = 62/144 (43%), Gaps = 25/144 (17%)
Query: 17 STIMNNCIHNPSLKYCNSSSPMDLNEIFKSTIVASHLCNESKNPNCVESFPKIDLRSRPK 76
S + N + PSL + +++E+ + T + S + N + P + +
Sbjct: 86 SENLLNLLPLPSLDLNLNRLRSNISELLELTNLTSL----DLDNNNITDIPPLIGLLKSN 141
Query: 77 ITPLYLSFNFFWKYCPLGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVE 136
+ L DLS+N ++ + P + ++ LDLS+N LS D+P +
Sbjct: 142 LKEL------------------DLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLS-DLP-K 180
Query: 137 SFSVLANLTFLNLSYNHFSEMKVS 160
S L+NL L+LS N S++
Sbjct: 181 LLSNLSNLNNLDLSGNKISDLPPE 204
|
Length = 394 |
| >gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Score = 39.5 bits (92), Expect = 0.003
Identities = 34/135 (25%), Positives = 61/135 (45%), Gaps = 21/135 (15%)
Query: 265 VKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWTNGGNVEL 324
V ++I + D ++ R++F++E K+L + + N+IR+LG ++TE+ G++
Sbjct: 49 VAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQ 108
Query: 325 WLSES--------------------APSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTG 364
+LS A S+ L V + + M YL V DL T
Sbjct: 109 FLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLS-SLNFVHRDLATR 167
Query: 365 SVLLTDNLEPLISRF 379
+ L+ +NL I+ F
Sbjct: 168 NCLVGENLTIKIADF 182
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304 |
| >gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Score = 38.7 bits (90), Expect = 0.004
Identities = 57/238 (23%), Positives = 96/238 (40%), Gaps = 56/238 (23%)
Query: 246 VGKNEGAAIYKGILRDGTRVKIEIYK-GDVSREIRDEFVEECKLLVQFQHKNLIRVLGWN 304
+G + ++ G T+V I+ K G +S E F+ E L+ Q QH L+R L
Sbjct: 14 LGAGQFGEVWMGYYNGHTKVAIKSLKQGSMSPE---AFLAEANLMKQLQHPRLVR-LYAV 69
Query: 305 NSRRTRAIVTEWTNGGNVELWLSESAPSWKHRLKVLIG----VVEAMCYLQEQWPEVDYD 360
++ I+TE+ G++ +L K + LI + E M ++ E+ + D
Sbjct: 70 VTQEPIYIITEYMENGSLVDFLKTPEGI-KLTINKLIDMAAQIAEGMAFI-ERKNYIHRD 127
Query: 361 LRTGSVLLTDNLEPLISRFKI-------EYQHRS-TKY--------------------VY 392
LR ++L+++ L I+ F + EY R K+ V+
Sbjct: 128 LRAANILVSETLCCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW 187
Query: 393 KFGLFLLEMIT----------NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMML 440
FG+ L E++T N ++ ERG RM P+N + E M L
Sbjct: 188 SFGILLTEIVTYGRIPYPGMTNPEVIQNLERG-------YRMPRPDNCPEELYELMRL 238
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 508 | |||
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 100.0 | |
| KOG1187 | 361 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0581 | 364 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| KOG0192 | 362 | consensus Tyrosine kinase specific for activated ( | 100.0 | |
| KOG0197 | 468 | consensus Tyrosine kinases [Signal transduction me | 100.0 | |
| KOG0575 | 592 | consensus Polo-like serine/threonine protein kinas | 100.0 | |
| KOG0615 | 475 | consensus Serine/threonine protein kinase Chk2 and | 100.0 | |
| KOG0595 | 429 | consensus Serine/threonine-protein kinase involved | 100.0 | |
| KOG0193 | 678 | consensus Serine/threonine protein kinase RAF [Sig | 100.0 | |
| KOG0593 | 396 | consensus Predicted protein kinase KKIAMRE [Genera | 100.0 | |
| KOG0591 | 375 | consensus NIMA (never in mitosis)-related G2-speci | 100.0 | |
| KOG1026 | 774 | consensus Nerve growth factor receptor TRKA and re | 100.0 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 100.0 | |
| KOG0582 | 516 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| KOG0661 | 538 | consensus MAPK related serine/threonine protein ki | 100.0 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 100.0 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 100.0 | |
| KOG0198 | 313 | consensus MEKK and related serine/threonine protei | 100.0 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 100.0 | |
| KOG0194 | 474 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0600 | 560 | consensus Cdc2-related protein kinase [Cell cycle | 100.0 | |
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 100.0 | |
| KOG0583 | 370 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 100.0 | |
| KOG1095 | 1025 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| KOG0592 | 604 | consensus 3-phosphoinositide-dependent protein kin | 100.0 | |
| KOG2345 | 302 | consensus Serine/threonine protein kinase/TGF-beta | 100.0 | |
| KOG4721 | 904 | consensus Serine/threonine protein kinase, contain | 100.0 | |
| KOG0659 | 318 | consensus Cdk activating kinase (CAK)/RNA polymera | 100.0 | |
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 100.0 | |
| KOG0598 | 357 | consensus Ribosomal protein S6 kinase and related | 100.0 | |
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 100.0 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 100.0 | |
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 100.0 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 100.0 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05045 | 290 | PTKc_RET Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 100.0 | |
| cd05111 | 279 | PTK_HER3 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| KOG0578 | 550 | consensus p21-activated serine/threonine protein k | 100.0 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 100.0 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 100.0 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG1989 | 738 | consensus ARK protein kinase family [Signal transd | 100.0 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 100.0 | |
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 100.0 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 100.0 | |
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 100.0 | |
| cd05043 | 280 | PTK_Ryk Pseudokinase domain of Ryk (Receptor relat | 100.0 | |
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG1094 | 807 | consensus Discoidin domain receptor DDR1 [Signal t | 100.0 | |
| KOG0585 | 576 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 100.0 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 100.0 | |
| KOG0611 | 668 | consensus Predicted serine/threonine protein kinas | 100.0 | |
| cd05094 | 291 | PTKc_TrkC Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05093 | 288 | PTKc_TrkB Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| KOG0588 | 786 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| cd05053 | 293 | PTKc_FGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 100.0 | |
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 100.0 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 100.0 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 100.0 | |
| KOG0201 | 467 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 100.0 | |
| KOG0663 | 419 | consensus Protein kinase PITSLRE and related kinas | 100.0 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 100.0 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 100.0 | |
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 100.0 | |
| KOG0580 | 281 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 100.0 | |
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 100.0 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 100.0 | |
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 100.0 | |
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 100.0 | |
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 100.0 | |
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 100.0 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 100.0 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 100.0 | |
| KOG0597 | 808 | consensus Serine-threonine protein kinase FUSED [G | 100.0 | |
| cd05091 | 283 | PTKc_Ror2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05032 | 277 | PTKc_InsR_like Catalytic domain of Insulin Recepto | 100.0 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0658 | 364 | consensus Glycogen synthase kinase-3 [Carbohydrate | 100.0 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 100.0 | |
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 100.0 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 100.0 | |
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 100.0 | |
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 100.0 | |
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 100.0 | |
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 100.0 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 100.0 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 100.0 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 100.0 | |
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 100.0 | |
| KOG1025 | 1177 | consensus Epidermal growth factor receptor EGFR an | 100.0 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 100.0 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 100.0 | |
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG4278 | 1157 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 100.0 | |
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 100.0 | |
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 100.0 | |
| cd05046 | 275 | PTK_CCK4 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 100.0 | |
| cd05092 | 280 | PTKc_TrkA Catalytic domain of the Protein Tyrosine | 100.0 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 100.0 | |
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05100 | 334 | PTKc_FGFR3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 100.0 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 100.0 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 100.0 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 100.0 | |
| KOG0660 | 359 | consensus Mitogen-activated protein kinase [Signal | 100.0 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 100.0 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 100.0 | |
| KOG0605 | 550 | consensus NDR and related serine/threonine kinases | 100.0 | |
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 100.0 | |
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 100.0 | |
| KOG0594 | 323 | consensus Protein kinase PCTAIRE and related kinas | 100.0 | |
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 100.0 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 100.0 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 100.0 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 100.0 | |
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 100.0 | |
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 100.0 | |
| cd05086 | 268 | PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 100.0 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 100.0 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| cd08227 | 327 | PK_STRAD_alpha Pseudokinase domain of STE20-relate | 100.0 | |
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 100.0 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 100.0 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 100.0 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 100.0 | |
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 100.0 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 100.0 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 100.0 | |
| KOG0589 | 426 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 100.0 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 100.0 | |
| cd05044 | 269 | PTKc_c-ros Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 100.0 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 100.0 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 100.0 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 100.0 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 100.0 | |
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 100.0 | |
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 100.0 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG4257 | 974 | consensus Focal adhesion tyrosine kinase FAK, cont | 100.0 | |
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 100.0 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 100.0 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 100.0 | |
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 100.0 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 100.0 | |
| cd08218 | 256 | STKc_Nek1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 100.0 | |
| cd07846 | 286 | STKc_CDKL2_3 Catalytic domain of the Serine/Threon | 100.0 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 100.0 | |
| cd05074 | 273 | PTKc_Tyro3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 100.0 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 100.0 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG3653 | 534 | consensus Transforming growth factor beta/activin | 100.0 | |
| cd08528 | 269 | STKc_Nek10 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 100.0 | |
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 100.0 | |
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0616 | 355 | consensus cAMP-dependent protein kinase catalytic | 100.0 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| KOG2052 | 513 | consensus Activin A type IB receptor, serine/threo | 100.0 | |
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 100.0 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 100.0 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0577 | 948 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 100.0 | |
| KOG0596 | 677 | consensus Dual specificity; serine/threonine and t | 100.0 | |
| cd07849 | 336 | STKc_ERK1_2_like Catalytic domain of Extracellular | 100.0 | |
| cd08217 | 265 | STKc_Nek2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd06647 | 293 | STKc_PAK_I Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| PHA03207 | 392 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| PTZ00284 | 467 | protein kinase; Provisional | 100.0 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 100.0 | |
| KOG0199 | 1039 | consensus ACK and related non-receptor tyrosine ki | 100.0 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 100.0 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 100.0 | |
| KOG4279 | 1226 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06616 | 288 | PKc_MKK4 Catalytic domain of the dual-specificity | 100.0 | |
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 100.0 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 100.0 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 100.0 | |
| KOG0983 | 391 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 100.0 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd07831 | 282 | STKc_MOK Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0599 | 411 | consensus Phosphorylase kinase gamma subunit [Carb | 100.0 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd06618 | 296 | PKc_MKK7 Catalytic domain of the dual-specificity | 100.0 | |
| KOG0694 | 694 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 100.0 | |
| KOG0032 | 382 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| cd08225 | 257 | STKc_Nek5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08226 | 328 | PK_STRAD_beta Pseudokinase domain of STE20-related | 100.0 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 100.0 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08216 | 314 | PK_STRAD Pseudokinase domain of STE20-related kina | 100.0 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 100.0 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0584 | 632 | consensus Serine/threonine protein kinase [General | 100.0 | |
| KOG4717 | 864 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0667 | 586 | consensus Dual-specificity tyrosine-phosphorylatio | 100.0 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd07855 | 334 | STKc_ERK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08530 | 256 | STKc_CNK2-like Catalytic domain of the Protein Ser | 100.0 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 100.0 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0574 | 502 | consensus STE20-like serine/threonine kinase MST [ | 99.98 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 99.98 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 99.98 | |
| cd07852 | 337 | STKc_MAPK15 Catalytic domain of the Serine/Threoni | 99.98 | |
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 99.98 | |
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 99.98 | |
| cd07842 | 316 | STKc_CDK8_like Catalytic domain of Cyclin-Dependen | 99.98 | |
| cd07856 | 328 | STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre | 99.98 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 99.98 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 99.98 | |
| PHA02882 | 294 | putative serine/threonine kinase; Provisional | 99.98 | |
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 99.98 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 99.98 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 99.98 | |
| cd07830 | 283 | STKc_MAK_like Catalytic domain of Male germ cell-A | 99.98 | |
| PLN00009 | 294 | cyclin-dependent kinase A; Provisional | 99.98 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 99.98 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 99.98 | |
| cd05118 | 283 | STKc_CMGC Catalytic domain of CMGC family Serine/T | 99.98 | |
| PHA03390 | 267 | pk1 serine/threonine-protein kinase 1; Provisional | 99.98 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 99.98 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 99.98 | |
| KOG0610 | 459 | consensus Putative serine/threonine protein kinase | 99.98 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 99.98 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 99.98 | |
| KOG0579 | 1187 | consensus Ste20-like serine/threonine protein kina | 99.98 | |
| cd07834 | 330 | STKc_MAPK Catalytic domain of the Serine/Threonine | 99.97 | |
| cd07858 | 337 | STKc_TEY_MAPK_plant Catalytic domain of the Serine | 99.97 | |
| cd07851 | 343 | STKc_p38 Catalytic domain of the Serine/Threonine | 99.97 | |
| KOG0033 | 355 | consensus Ca2+/calmodulin-dependent protein kinase | 99.97 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 99.97 | |
| cd07838 | 287 | STKc_CDK4_6_like Catalytic domain of Cyclin-Depend | 99.97 | |
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 99.97 | |
| cd07854 | 342 | STKc_MAPK4_6 Catalytic domain of the Serine/Threon | 99.97 | |
| KOG0607 | 463 | consensus MAP kinase-interacting kinase and relate | 99.97 | |
| KOG1006 | 361 | consensus Mitogen-activated protein kinase (MAPK) | 99.97 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 99.97 | |
| cd07866 | 311 | STKc_BUR1 Catalytic domain of the Serine/Threonine | 99.97 | |
| PHA03210 | 501 | serine/threonine kinase US3; Provisional | 99.97 | |
| KOG4250 | 732 | consensus TANK binding protein kinase TBK1 [Signal | 99.97 | |
| cd07829 | 282 | STKc_CDK_like Catalytic domain of Cyclin-Dependent | 99.97 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 99.97 | |
| PTZ00024 | 335 | cyclin-dependent protein kinase; Provisional | 99.97 | |
| KOG0200 | 609 | consensus Fibroblast/platelet-derived growth facto | 99.97 | |
| cd08222 | 260 | STKc_Nek11 Catalytic domain of the Protein Serine/ | 99.97 | |
| KOG0586 | 596 | consensus Serine/threonine protein kinase [General | 99.97 | |
| KOG4645 | 1509 | consensus MAPKKK (MAP kinase kinase kinase) SSK2 a | 99.97 | |
| cd07857 | 332 | STKc_MPK1 Catalytic domain of the Serine/Threonine | 99.97 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 99.97 | |
| KOG0604 | 400 | consensus MAP kinase-activated protein kinase 2 [S | 99.97 | |
| KOG0984 | 282 | consensus Mitogen-activated protein kinase (MAPK) | 99.97 | |
| cd05576 | 237 | STKc_RPK118_like Catalytic domain of the Protein S | 99.96 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 99.96 | |
| KOG0666 | 438 | consensus Cyclin C-dependent kinase CDK8 [Transcri | 99.96 | |
| KOG0662 | 292 | consensus Cyclin-dependent kinase CDK5 [Intracellu | 99.96 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 99.96 | |
| KOG1024 | 563 | consensus Receptor-like protein tyrosine kinase RY | 99.96 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.96 | |
| smart00220 | 244 | S_TKc Serine/Threonine protein kinases, catalytic | 99.96 | |
| KOG0668 | 338 | consensus Casein kinase II, alpha subunit [Signal | 99.96 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 99.96 | |
| KOG1151 | 775 | consensus Tousled-like protein kinase [Signal tran | 99.95 | |
| KOG0669 | 376 | consensus Cyclin T-dependent kinase CDK9 [Cell cyc | 99.95 | |
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 99.95 | |
| KOG0587 | 953 | consensus Traf2- and Nck-interacting kinase and re | 99.95 | |
| KOG0671 | 415 | consensus LAMMER dual specificity kinases [Signal | 99.95 | |
| cd00180 | 215 | PKc Catalytic domain of Protein Kinases. Protein K | 99.95 | |
| KOG0986 | 591 | consensus G protein-coupled receptor kinase [Signa | 99.95 | |
| KOG4236 | 888 | consensus Serine/threonine protein kinase PKC mu/P | 99.94 | |
| KOG1345 | 378 | consensus Serine/threonine kinase [Signal transduc | 99.94 | |
| KOG0690 | 516 | consensus Serine/threonine protein kinase [Signal | 99.94 | |
| KOG0664 | 449 | consensus Nemo-like MAPK-related serine/threonine | 99.94 | |
| KOG0614 | 732 | consensus cGMP-dependent protein kinase [Signal tr | 99.93 | |
| KOG0608 | 1034 | consensus Warts/lats-like serine threonine kinases | 99.93 | |
| KOG1027 | 903 | consensus Serine/threonine protein kinase and endo | 99.93 | |
| KOG1290 | 590 | consensus Serine/threonine protein kinase [Signal | 99.93 | |
| smart00221 | 225 | STYKc Protein kinase; unclassified specificity. Ph | 99.93 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 99.93 | |
| KOG1152 | 772 | consensus Signal transduction serine/threonine kin | 99.92 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 99.92 | |
| KOG0695 | 593 | consensus Serine/threonine protein kinase [Signal | 99.91 | |
| KOG0665 | 369 | consensus Jun-N-terminal kinase (JNK) [Signal tran | 99.91 | |
| KOG0670 | 752 | consensus U4/U6-associated splicing factor PRP4 [R | 99.9 | |
| KOG1167 | 418 | consensus Serine/threonine protein kinase of the C | 99.9 | |
| PRK09188 | 365 | serine/threonine protein kinase; Provisional | 99.89 | |
| cd05147 | 190 | RIO1_euk RIO kinase family; eukaryotic RIO1, catal | 99.88 | |
| KOG0195 | 448 | consensus Integrin-linked kinase [Signal transduct | 99.88 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.87 | |
| KOG1163 | 341 | consensus Casein kinase (serine/threonine/tyrosine | 99.87 | |
| PRK10359 | 232 | lipopolysaccharide core biosynthesis protein; Prov | 99.86 | |
| smart00750 | 176 | KIND kinase non-catalytic C-lobe domain. It is an | 99.86 | |
| cd05145 | 190 | RIO1_like RIO kinase family; RIO1, RIO3 and simila | 99.86 | |
| KOG1164 | 322 | consensus Casein kinase (serine/threonine/tyrosine | 99.85 | |
| PRK10345 | 210 | hypothetical protein; Provisional | 99.82 | |
| KOG1165 | 449 | consensus Casein kinase (serine/threonine/tyrosine | 99.81 | |
| PRK12274 | 218 | serine/threonine protein kinase; Provisional | 99.81 | |
| COG0515 | 384 | SPS1 Serine/threonine protein kinase [General func | 99.81 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 99.8 | |
| PRK14879 | 211 | serine/threonine protein kinase; Provisional | 99.8 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.79 | |
| smart00090 | 237 | RIO RIO-like kinase. | 99.78 | |
| KOG4158 | 598 | consensus BRPK/PTEN-induced protein kinase [Signal | 99.78 | |
| KOG1023 | 484 | consensus Natriuretic peptide receptor, guanylate | 99.77 | |
| cd05144 | 198 | RIO2_C RIO kinase family; RIO2, C-terminal catalyt | 99.77 | |
| TIGR03724 | 199 | arch_bud32 Kae1-associated kinase Bud32. Members o | 99.77 | |
| PRK09605 | 535 | bifunctional UGMP family protein/serine/threonine | 99.76 | |
| KOG1166 | 974 | consensus Mitotic checkpoint serine/threonine prot | 99.72 | |
| PF14531 | 288 | Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_ | 99.71 | |
| PRK01723 | 239 | 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | 99.68 | |
| cd05119 | 187 | RIO RIO kinase family, catalytic domain. The RIO k | 99.68 | |
| cd05120 | 155 | APH_ChoK_like Aminoglycoside 3'-phosphotransferase | 99.67 | |
| TIGR01982 | 437 | UbiB 2-polyprenylphenol 6-hydroxylase. This model | 99.61 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.53 | |
| PRK04750 | 537 | ubiB putative ubiquinone biosynthesis protein UbiB | 99.47 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.45 | |
| KOG0617 | 264 | consensus Ras suppressor protein (contains leucine | 99.45 | |
| cd05151 | 170 | ChoK Choline Kinase (ChoK). The ChoK subfamily is | 99.43 | |
| KOG0617 | 264 | consensus Ras suppressor protein (contains leucine | 99.43 | |
| KOG4194 | 873 | consensus Membrane glycoprotein LIG-1 [Signal tran | 99.42 | |
| KOG0444 | 1255 | consensus Cytoskeletal regulator Flightless-I (con | 99.38 | |
| PLN03150 | 623 | hypothetical protein; Provisional | 99.37 | |
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 99.37 | |
| cd05146 | 197 | RIO3_euk RIO kinase family; eukaryotic RIO3, catal | 99.34 | |
| COG3642 | 204 | Mn2+-dependent serine/threonine protein kinase [Si | 99.33 | |
| cd05154 | 223 | ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an | 99.33 | |
| KOG0472 | 565 | consensus Leucine-rich repeat protein [Function un | 99.33 | |
| KOG4237 | 498 | consensus Extracellular matrix protein slit, conta | 99.32 | |
| KOG1033 | 516 | consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati | 99.31 | |
| KOG1243 | 690 | consensus Protein kinase [General function predict | 99.29 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.29 | |
| KOG3087 | 229 | consensus Serine/threonine protein kinase [General | 99.28 | |
| KOG1266 | 458 | consensus Protein kinase [Signal transduction mech | 99.24 | |
| KOG4194 | 873 | consensus Membrane glycoprotein LIG-1 [Signal tran | 99.2 | |
| KOG0444 | 1255 | consensus Cytoskeletal regulator Flightless-I (con | 99.19 | |
| PLN03150 | 623 | hypothetical protein; Provisional | 99.12 | |
| PRK15123 | 268 | lipopolysaccharide core heptose(I) kinase RfaP; Pr | 99.12 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.11 | |
| KOG0472 | 565 | consensus Leucine-rich repeat protein [Function un | 99.09 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.08 | |
| PF01163 | 188 | RIO1: RIO1 family; InterPro: IPR018934 Protein pho | 99.06 | |
| KOG0618 | 1081 | consensus Serine/threonine phosphatase 2C containi | 99.04 | |
| PF14580 | 175 | LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQ | 98.99 | |
| PRK15387 | 788 | E3 ubiquitin-protein ligase SspH2; Provisional | 98.97 | |
| PRK15370 | 754 | E3 ubiquitin-protein ligase SlrP; Provisional | 98.92 | |
| PF13855 | 61 | LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RF | 98.92 | |
| KOG4237 | 498 | consensus Extracellular matrix protein slit, conta | 98.92 | |
| COG0478 | 304 | RIO-like serine/threonine protein kinase fused to | 98.92 | |
| PRK15387 | 788 | E3 ubiquitin-protein ligase SspH2; Provisional | 98.87 | |
| PRK15370 | 754 | E3 ubiquitin-protein ligase SlrP; Provisional | 98.87 | |
| COG0661 | 517 | AarF Predicted unusual protein kinase [General fun | 98.86 | |
| KOG0618 | 1081 | consensus Serine/threonine phosphatase 2C containi | 98.86 | |
| KOG3741 | 655 | consensus Poly(A) ribonuclease subunit [RNA proces | 98.85 | |
| KOG0532 | 722 | consensus Leucine-rich repeat (LRR) protein, conta | 98.82 | |
| PF14580 | 175 | LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQ | 98.81 | |
| PRK09902 | 216 | hypothetical protein; Provisional | 98.77 | |
| PF06293 | 206 | Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; | 98.76 | |
| KOG1259 | 490 | consensus Nischarin, modulator of integrin alpha5 | 98.65 | |
| TIGR02172 | 226 | Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou | 98.61 | |
| PF13855 | 61 | LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RF | 98.59 | |
| COG1718 | 268 | RIO1 Serine/threonine protein kinase involved in c | 98.58 | |
| PLN03210 | 1153 | Resistant to P. syringae 6; Provisional | 98.49 | |
| PF06176 | 229 | WaaY: Lipopolysaccharide core biosynthesis protein | 98.47 | |
| PF01636 | 239 | APH: Phosphotransferase enzyme family This family | 98.46 | |
| KOG1235 | 538 | consensus Predicted unusual protein kinase [Genera | 98.46 | |
| KOG0532 | 722 | consensus Leucine-rich repeat (LRR) protein, conta | 98.44 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 98.4 | |
| COG4248 | 637 | Uncharacterized protein with protein kinase and he | 98.4 | |
| PLN03210 | 1153 | Resistant to P. syringae 6; Provisional | 98.37 | |
| cd05150 | 244 | APH Aminoglycoside 3'-phosphotransferase (APH). Th | 98.37 | |
| PF10707 | 199 | YrbL-PhoP_reg: PhoP regulatory network protein Yrb | 98.35 | |
| COG4886 | 394 | Leucine-rich repeat (LRR) protein [Function unknow | 98.32 | |
| COG2112 | 201 | Predicted Ser/Thr protein kinase [Signal transduct | 98.3 | |
| PLN02876 | 822 | acyl-CoA dehydrogenase | 98.26 | |
| COG4886 | 394 | Leucine-rich repeat (LRR) protein [Function unknow | 98.25 | |
| KOG4579 | 177 | consensus Leucine-rich repeat (LRR) protein associ | 98.24 | |
| KOG1259 | 490 | consensus Nischarin, modulator of integrin alpha5 | 98.21 | |
| KOG1859 | 1096 | consensus Leucine-rich repeat proteins [General fu | 98.14 | |
| KOG4579 | 177 | consensus Leucine-rich repeat (LRR) protein associ | 98.12 | |
| cd05155 | 235 | APH_ChoK_like_1 Uncharacterized bacterial proteins | 98.11 | |
| cd00116 | 319 | LRR_RI Leucine-rich repeats (LRRs), ribonuclease i | 98.1 | |
| PRK10593 | 297 | hypothetical protein; Provisional | 98.09 |
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-54 Score=489.54 Aligned_cols=418 Identities=22% Similarity=0.309 Sum_probs=315.5
Q ss_pred cccccCCCCCccc-CCCccccCCCCCcCeEeCccCcccccCCcc------ccEEEcccCcccCCCChhhhccCCcccccc
Q 045127 52 HLCNESKNPNCVE-SFPKIDLRSRPKITPLYLSFNFFWKYCPLG------IMSIDLSNNSLKGAFPIDVLLCTQIQALDL 124 (508)
Q Consensus 52 ~l~~L~~~~n~~~-~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~------l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 124 (508)
.+..|+...|.+. .+|. .|.++++|+.|+|++|++.+.+|.. +++|+|++|++++.+|..|..+++|+.|+|
T Consensus 476 ~L~~L~ls~n~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 554 (968)
T PLN00113 476 RLENLDLSRNQFSGAVPR-KLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDL 554 (968)
T ss_pred cceEEECcCCccCCccCh-hhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEEC
Confidence 3445555666665 5565 8999999999999999999888854 489999999999999999999999999999
Q ss_pred ccccccCcCCchhhhcCCccceeccccccccCccccccccccccCCCCccCCCCC----------CCCCC----cchhhh
Q 045127 125 SYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLHSGLF----------PGHHN----YTIKAV 190 (508)
Q Consensus 125 ~~N~l~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~~~n~~~----------~c~~~----~~~~i~ 190 (508)
++|+++|.+| ..+..+++|+.|++++|+++| ..|..+.+..+...++.+|+.+ +|... ....++
T Consensus 555 s~N~l~~~~p-~~l~~l~~L~~l~ls~N~l~~-~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~~~~c~~~~~~~~~~~~~ 632 (968)
T PLN00113 555 SQNQLSGEIP-KNLGNVESLVQVNISHNHLHG-SLPSTGAFLAINASAVAGNIDLCGGDTTSGLPPCKRVRKTPSWWFYI 632 (968)
T ss_pred CCCcccccCC-hhHhcCcccCEEeccCCccee-eCCCcchhcccChhhhcCCccccCCccccCCCCCccccccceeeeeh
Confidence 9999999999 888999999999999999999 7777777888888888888754 24321 111112
Q ss_pred HHhhhH-HHHHHHhh-hccccccccc--CCC-------ccccccc--CCCCCHHHHHHhhcCCCCCceeeecCCeEEEEE
Q 045127 191 ILLVGF-PIFVILMI-SCTGWLCFVR--PDF-------LPRMLRR--NHKFTTWMLKAATNGFSKKNLVGKNEGAAIYKG 257 (508)
Q Consensus 191 i~~~~~-~~~v~~~~-~~~~~~~~~~--~~~-------~~~~~~~--~~~~~~~~l~~~~~~~~~~~~lg~G~~g~V~~~ 257 (508)
++++++ ++++++++ +++.++++.. +.. ....+.. ...+++++ ....|+..+.||+|+||.||+|
T Consensus 633 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ig~G~~g~Vy~~ 709 (968)
T PLN00113 633 TCTLGAFLVLALVAFGFVFIRGRNNLELKRVENEDGTWELQFFDSKVSKSITIND---ILSSLKEENVISRGKKGASYKG 709 (968)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccchhhhHHH---HHhhCCcccEEccCCCeeEEEE
Confidence 222222 22222111 1221221111 000 0000111 12233333 3456788899999999999999
Q ss_pred EE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEeecCCCCHHHHhccCCCCHHHH
Q 045127 258 IL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWTNGGNVELWLSESAPSWKHR 336 (508)
Q Consensus 258 ~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~l~~~~~ 336 (508)
.. .++..||||.+...... ...|++.+++++||||+++++++.+++..++||||+++|+|.++++ .++|.++
T Consensus 710 ~~~~~~~~vavK~~~~~~~~-----~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~--~l~~~~~ 782 (968)
T PLN00113 710 KSIKNGMQFVVKEINDVNSI-----PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLR--NLSWERR 782 (968)
T ss_pred EECCCCcEEEEEEccCCccc-----cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHh--cCCHHHH
Confidence 97 57899999998643221 2346888999999999999999999999999999999999999995 4899999
Q ss_pred HHHHHHHHHHHHHHh---hCCCccccCCCCCCEEecCCCceEEeeccC-----------------------CCCCCCcch
Q 045127 337 LKVLIGVVEAMCYLQ---EQWPEVDYDLRTGSVLLTDNLEPLISRFKI-----------------------EYQHRSTKY 390 (508)
Q Consensus 337 ~~i~~~i~~~L~~LH---~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~-----------------------~~~~~~~~D 390 (508)
.+|+.|+++||+||| +. +|+||||||+||+++.++.+++. ||. ...++.++|
T Consensus 783 ~~i~~~ia~~L~yLH~~~~~-~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sD 860 (968)
T PLN00113 783 RKIAIGIAKALRFLHCRCSP-AVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTDTKCFISSAYVAPETRETKDITEKSD 860 (968)
T ss_pred HHHHHHHHHHHHHhccCCCC-CeecCCCCHHhEEECCCCceEEE-eccccccccCCCccccccccCcccccCCCCCcccc
Confidence 999999999999999 55 99999999999999988887764 322 134678999
Q ss_pred hhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccch-hhhhhhhcccCC-cchHHHHHHHHHHHHhcCCCCCCCCCC
Q 045127 391 VYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPEN-LQLVVDERMMLT-ENMFDQAEQGLGLGLMCTDQPTGKLPS 468 (508)
Q Consensus 391 v~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~-~~~~~~~~~l~~l~~~Cl~~dP~~RPs 468 (508)
||||||++|||+||+.||+........+.+|.+...... ....+|+.+... ....++..++.+++.+||+.||++|||
T Consensus 861 v~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt 940 (968)
T PLN00113 861 IYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPC 940 (968)
T ss_pred hhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcC
Confidence 999999999999999999765555566777776655433 445566655322 223456778899999999999999999
Q ss_pred HHHHHHHHHHHHhhCC
Q 045127 469 LVQIYNMITRAYKSCP 484 (508)
Q Consensus 469 ~~evl~~L~~i~~~~~ 484 (508)
|+||++.|+++.+...
T Consensus 941 ~~evl~~L~~~~~~~~ 956 (968)
T PLN00113 941 ANDVLKTLESASRSSS 956 (968)
T ss_pred HHHHHHHHHHhhcccc
Confidence 9999999999876544
|
|
| >KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-48 Score=390.65 Aligned_cols=258 Identities=28% Similarity=0.497 Sum_probs=226.7
Q ss_pred cCCCCCHHHHHHhhcCCCCCceeeecCCeEEEEEEECCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeE
Q 045127 224 RNHKFTTWMLKAATNGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGW 303 (508)
Q Consensus 224 ~~~~~~~~~l~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~ 303 (508)
....|++.++..+|++|...+.||+|+||.||+|..++|+.||||++....... ..+|..|+.++.+++|||+|+++||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~-~~eF~~Ei~~ls~l~H~Nlv~LlGy 139 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQG-EREFLNEVEILSRLRHPNLVKLLGY 139 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcc-hhHHHHHHHHHhcCCCcCcccEEEE
Confidence 567799999999999999999999999999999999999999999886554432 5669999999999999999999999
Q ss_pred EecCC-eeEEEEeecCCCCHHHHhcc--C-CCCHHHHHHHHHHHHHHHHHHhhCC--CccccCCCCCCEEecCCCceEEe
Q 045127 304 NNSRR-TRAIVTEWTNGGNVELWLSE--S-APSWKHRLKVLIGVVEAMCYLQEQW--PEVDYDLRTGSVLLTDNLEPLIS 377 (508)
Q Consensus 304 ~~~~~-~~~lv~e~~~~gsL~~~l~~--~-~l~~~~~~~i~~~i~~~L~~LH~~~--~iiH~Dlkp~NIll~~~~~~kl~ 377 (508)
|.+.+ +.++|||||++|+|.+++.. . .++|.+|++||.++|+||+|||..+ .|+||||||+|||+|+++++||+
T Consensus 140 C~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKls 219 (361)
T KOG1187|consen 140 CLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLS 219 (361)
T ss_pred EecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEcc
Confidence 99988 59999999999999999982 2 7899999999999999999999987 59999999999999999999999
Q ss_pred eccCC----------------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccc-cCcccHHHHHHHhccc
Q 045127 378 RFKIE----------------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFE-RGEAGFIEYIRMHYPE 428 (508)
Q Consensus 378 Dfg~~----------------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~-~~~~~~~~~~~~~~~~ 428 (508)
|||++ +..+.|+|||||||+++|++||+.|.+... .+...+..|++..+.+
T Consensus 220 DFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~ 299 (361)
T KOG1187|consen 220 DFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEE 299 (361)
T ss_pred CccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHC
Confidence 99863 124568999999999999999999987544 4455689998877776
Q ss_pred -hhhhhhhhccc-CCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhh
Q 045127 429 -NLQLVVDERMM-LTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKS 482 (508)
Q Consensus 429 -~~~~~~~~~l~-~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 482 (508)
.+.+++|+.+. .......++.++..++.+|++.+|.+||+|.||+++|+.+...
T Consensus 300 ~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~~ 355 (361)
T KOG1187|consen 300 GKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILSL 355 (361)
T ss_pred cchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhccc
Confidence 48999999986 3332226888999999999999999999999999999766544
|
|
| >KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-43 Score=333.10 Aligned_cols=232 Identities=18% Similarity=0.233 Sum_probs=192.8
Q ss_pred CCCHHHHHHhhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEe
Q 045127 227 KFTTWMLKAATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNN 305 (508)
Q Consensus 227 ~~~~~~l~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 305 (508)
.++++|+++ .+.||+|..|+||++.+ ++++.+|+|++.....+...+++.+|++++++.+||+||+++|.|.
T Consensus 75 ~i~~~dle~-------~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~ 147 (364)
T KOG0581|consen 75 GISLSDLER-------LGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFY 147 (364)
T ss_pred ccCHHHhhh-------hhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEE
Confidence 355556554 48899999999999998 5789999999987777778899999999999999999999999999
Q ss_pred cCC-eeEEEEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhh-CCCccccCCCCCCEEecCCCceEEeeccCC
Q 045127 306 SRR-TRAIVTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQE-QWPEVDYDLRTGSVLLTDNLEPLISRFKIE 382 (508)
Q Consensus 306 ~~~-~~~lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~-~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~ 382 (508)
.+. ...|+||||++|||++++. .+++++....+|+.+|++||.|||+ + +||||||||+|||++..|.+||||||.+
T Consensus 148 ~~~~~isI~mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~-~IIHRDIKPsNlLvNskGeVKicDFGVS 226 (364)
T KOG0581|consen 148 SNGEEISICMEYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEER-KIIHRDIKPSNLLVNSKGEVKICDFGVS 226 (364)
T ss_pred eCCceEEeehhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcc-CeeeccCCHHHeeeccCCCEEecccccc
Confidence 888 5999999999999999998 5789999999999999999999996 7 9999999999999999999999999863
Q ss_pred -------------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhc
Q 045127 383 -------------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDER 437 (508)
Q Consensus 383 -------------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (508)
..|+.++||||||++++|+.+|+.||...........+. +..+++..
T Consensus 227 ~~lvnS~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~L--------l~~Iv~~p 298 (364)
T KOG0581|consen 227 GILVNSIANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFEL--------LCAIVDEP 298 (364)
T ss_pred HHhhhhhcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHH--------HHHHhcCC
Confidence 367789999999999999999999997642222222211 22233321
Q ss_pred ccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 438 MMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 438 l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
....+. .....++..++..|+++||.+|||+.|++++
T Consensus 299 pP~lP~-~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~H 335 (364)
T KOG0581|consen 299 PPRLPE-GEFSPEFRSFVSCCLRKDPSERPSAKQLLQH 335 (364)
T ss_pred CCCCCc-ccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 111111 0346778899999999999999999999875
|
|
| >KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-42 Score=344.24 Aligned_cols=233 Identities=21% Similarity=0.323 Sum_probs=192.4
Q ss_pred CCCceeeecCCeEEEEEEECCCCEEEEEEecCCC-CHHHHHHHHHHHHHHhhcCCCCccceeeEEecCC-eeEEEEeecC
Q 045127 241 SKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDV-SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRR-TRAIVTEWTN 318 (508)
Q Consensus 241 ~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~lv~e~~~ 318 (508)
...+.+|+|+||+||+|.|.....||||++.... .....+.|.+|+.+|.+++|||||+++|++.++. ..++||||++
T Consensus 44 ~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~ 123 (362)
T KOG0192|consen 44 PIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMP 123 (362)
T ss_pred hhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCC
Confidence 3446699999999999999754559999997543 2233679999999999999999999999999887 7899999999
Q ss_pred CCCHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHhhCCC-ccccCCCCCCEEecCCC-ceEEeeccCC-----------
Q 045127 319 GGNVELWLSE---SAPSWKHRLKVLIGVVEAMCYLQEQWP-EVDYDLRTGSVLLTDNL-EPLISRFKIE----------- 382 (508)
Q Consensus 319 ~gsL~~~l~~---~~l~~~~~~~i~~~i~~~L~~LH~~~~-iiH~Dlkp~NIll~~~~-~~kl~Dfg~~----------- 382 (508)
+|+|.++++. ..+++..+++|+.|||+|+.|||++ + ||||||||+|||++.++ ++||+|||++
T Consensus 124 ~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~-~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~~~~~ 202 (362)
T KOG0192|consen 124 GGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSE-GPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISKTSMT 202 (362)
T ss_pred CCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC-CCeeecccChhhEEEcCCCCEEEECCCccceeecccccccc
Confidence 9999999974 7899999999999999999999999 9 99999999999999997 9999999873
Q ss_pred ------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHH-HHhccchhhhhhhhcccCCcc
Q 045127 383 ------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYI-RMHYPENLQLVVDERMMLTEN 443 (508)
Q Consensus 383 ------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~ 443 (508)
..++.|+|||||||++|||+||+.||.+... . .....+ .... .+.+.
T Consensus 203 ~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~-~-~~~~~v~~~~~--------Rp~~p---- 268 (362)
T KOG0192|consen 203 SVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP-V-QVASAVVVGGL--------RPPIP---- 268 (362)
T ss_pred CCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH-H-HHHHHHHhcCC--------CCCCC----
Confidence 1478899999999999999999999987654 1 111111 1111 11111
Q ss_pred hHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCC
Q 045127 444 MFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSCPILTSE 489 (508)
Q Consensus 444 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~~ 489 (508)
..+...+..++.+||+.||++||++.|++..|+.+..........
T Consensus 269 -~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~~~~~~~ 313 (362)
T KOG0192|consen 269 -KECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHISSAGPE 313 (362)
T ss_pred -ccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhhcccCcc
Confidence 124567788888999999999999999999999998876654443
|
|
| >KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-42 Score=339.50 Aligned_cols=224 Identities=20% Similarity=0.348 Sum_probs=191.9
Q ss_pred CCceeeecCCeEEEEEEECCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEeecCCCC
Q 045127 242 KKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWTNGGN 321 (508)
Q Consensus 242 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gs 321 (508)
..+.||+|-||.||.|.+.....||+|.++.... ..+.|.+|+++|++++|++||+++|+|..++.++||||||+.|+
T Consensus 210 l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m--~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~Gs 287 (468)
T KOG0197|consen 210 LIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSM--SPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKGS 287 (468)
T ss_pred HHHHhcCCccceEEEEEEcCCCcccceEEecccc--ChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccCc
Confidence 3488999999999999998778999999976432 35788899999999999999999999999889999999999999
Q ss_pred HHHHhc---cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC---------------
Q 045127 322 VELWLS---ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY--------------- 383 (508)
Q Consensus 322 L~~~l~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~--------------- 383 (508)
|.++++ +..+...+.+.++.|||+|++||+++ ++|||||.+.|||++++..+||+|||+++
T Consensus 288 Ll~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~-~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~~~kf 366 (468)
T KOG0197|consen 288 LLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESK-NYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTASEGGKF 366 (468)
T ss_pred HHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhC-CccchhhhhhheeeccCceEEEcccccccccCCCceeecCCCCC
Confidence 999998 46789999999999999999999999 99999999999999999999999999964
Q ss_pred -------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHHH
Q 045127 384 -------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQAE 449 (508)
Q Consensus 384 -------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 449 (508)
.++.|||||||||+||||+| |+.||..+...+ ..+.+...+ ++..+ ..++.
T Consensus 367 PIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~e--v~~~le~Gy----------Rlp~P---~~CP~ 431 (468)
T KOG0197|consen 367 PIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEE--VLELLERGY----------RLPRP---EGCPD 431 (468)
T ss_pred CceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHH--HHHHHhccC----------cCCCC---CCCCH
Confidence 45679999999999999999 999988665332 222222222 22222 23567
Q ss_pred HHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhC
Q 045127 450 QGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSC 483 (508)
Q Consensus 450 ~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 483 (508)
.+.++|..||+.+|++|||++.+...|+++....
T Consensus 432 ~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~~ 465 (468)
T KOG0197|consen 432 EVYELMKSCWHEDPEDRPTFETLREVLEDFFTST 465 (468)
T ss_pred HHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhcc
Confidence 7888999999999999999999999999887653
|
|
| >KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-41 Score=335.60 Aligned_cols=221 Identities=17% Similarity=0.247 Sum_probs=186.0
Q ss_pred cCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCC--CHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEE
Q 045127 238 NGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDV--SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVT 314 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 314 (508)
..|...+.||+|||+.||.++. ..|+.||+|++.+.. ....++.+.+|+++.+.|+|||||+++++|++.+++|||.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 5699999999999999999997 789999999996432 3346788999999999999999999999999999999999
Q ss_pred eecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC----------
Q 045127 315 EWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY---------- 383 (508)
Q Consensus 315 e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~---------- 383 (508)
|+|+.++|..+++ .+.+++.++..++.||+.||.|||++ +|+|||||..|+|++++.++||+|||++.
T Consensus 98 ELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~-~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~Erk~ 176 (592)
T KOG0575|consen 98 ELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSL-GIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGERKK 176 (592)
T ss_pred EecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhc-CceecccchhheeecCcCcEEecccceeeeecCcccccc
Confidence 9999999999998 78899999999999999999999999 99999999999999999999999999853
Q ss_pred -----------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHH
Q 045127 384 -----------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFD 446 (508)
Q Consensus 384 -----------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 446 (508)
..+..+||||+||+||-|++|++||+... +.+-... +.... +..+..
T Consensus 177 TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~-----vkety~~--------Ik~~~---Y~~P~~ 240 (592)
T KOG0575|consen 177 TLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKT-----VKETYNK--------IKLNE---YSMPSH 240 (592)
T ss_pred eecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccch-----HHHHHHH--------HHhcC---cccccc
Confidence 23567899999999999999999998432 1111111 11111 111112
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 447 QAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 447 ~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
...+..+++.++|++||.+|||+++|+..
T Consensus 241 ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h 269 (592)
T KOG0575|consen 241 LSAEAKDLIRKLLRPNPSERPSLDEVLDH 269 (592)
T ss_pred cCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 24456678889999999999999999874
|
|
| >KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-41 Score=322.94 Aligned_cols=227 Identities=17% Similarity=0.194 Sum_probs=183.7
Q ss_pred hhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHH------HHHHHHHHHHHHhhcCCCCccceeeEEecCC
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSRE------IRDEFVEECKLLVQFQHKNLIRVLGWNNSRR 308 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 308 (508)
..+.|-..+.||+|+||.|-+|.. ++|+.||||+++...... ......+|+++|++++|||||++++++..++
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d 249 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD 249 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC
Confidence 445678889999999999999986 679999999997443221 1234579999999999999999999999999
Q ss_pred eeEEEEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCC---CceEEeeccCCCC
Q 045127 309 TRAIVTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDN---LEPLISRFKIEYQ 384 (508)
Q Consensus 309 ~~~lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~---~~~kl~Dfg~~~~ 384 (508)
..||||||++||+|.+.+- .+.+.+....-+++|++.|+.|||++ ||+||||||+|||+..+ ..+||+|||+++.
T Consensus 250 s~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~-GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~ 328 (475)
T KOG0615|consen 250 SSYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQ-GIIHRDIKPENILLSNDAEDCLLKITDFGLAKV 328 (475)
T ss_pred ceEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHc-CcccccCCcceEEeccCCcceEEEecccchhhc
Confidence 9999999999999999887 77788888899999999999999999 99999999999999755 8899999998531
Q ss_pred -----------------------------CCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhh
Q 045127 385 -----------------------------HRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVD 435 (508)
Q Consensus 385 -----------------------------~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (508)
+..+.|+||+||+||-+++|.+||.+...+. .+.+.+ ..
T Consensus 329 ~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~-sl~eQI-----------~~ 396 (475)
T KOG0615|consen 329 SGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDP-SLKEQI-----------LK 396 (475)
T ss_pred cccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCc-cHHHHH-----------hc
Confidence 2347899999999999999999997543322 111111 11
Q ss_pred hcccC-CcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 436 ERMML-TENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 436 ~~l~~-~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
.++.. +....+..++.++++.+++..||++|||++|+++.
T Consensus 397 G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~h 437 (475)
T KOG0615|consen 397 GRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNH 437 (475)
T ss_pred CcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcC
Confidence 11111 11123446778899999999999999999999974
|
|
| >KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-40 Score=315.62 Aligned_cols=177 Identities=20% Similarity=0.352 Sum_probs=161.1
Q ss_pred HhhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCC-CHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEE
Q 045127 235 AATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDV-SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAI 312 (508)
Q Consensus 235 ~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 312 (508)
...++|...+.||+|+||+||+|++ .++..||||.+.... .....+.+..|+.+|+.++|||||++++++..++..|+
T Consensus 7 ~~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~l 86 (429)
T KOG0595|consen 7 RVVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYL 86 (429)
T ss_pred cccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEE
Confidence 3457899999999999999999998 468999999997553 55567888999999999999999999999999999999
Q ss_pred EEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCC------CceEEeeccCC---
Q 045127 313 VTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDN------LEPLISRFKIE--- 382 (508)
Q Consensus 313 v~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~------~~~kl~Dfg~~--- 382 (508)
|||||.||+|.++++ .+.+++..+..++.|+|.||++||++ +||||||||.|||++.. -.+||+|||++
T Consensus 87 VMEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~-~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L 165 (429)
T KOG0595|consen 87 VMEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHEN-NIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFL 165 (429)
T ss_pred EEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeccCCcceEEeccCCCCCCCceEEecccchhhhC
Confidence 999999999999999 56999999999999999999999999 99999999999999864 46899999985
Q ss_pred -----------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccc
Q 045127 383 -----------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFE 412 (508)
Q Consensus 383 -----------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~ 412 (508)
.+|+.|+|+||+|+|+|++++|+.||+...
T Consensus 166 ~~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t 218 (429)
T KOG0595|consen 166 QPGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAET 218 (429)
T ss_pred CchhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccC
Confidence 468899999999999999999999998543
|
|
| >KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-40 Score=328.55 Aligned_cols=243 Identities=17% Similarity=0.268 Sum_probs=196.9
Q ss_pred HHHHHhhcCCCCCceeeecCCeEEEEEEECCCCEEEEEEecCC-CCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCe
Q 045127 231 WMLKAATNGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGD-VSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRT 309 (508)
Q Consensus 231 ~~l~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 309 (508)
++.....+.+...+.||+|.||+||+|+|. ..||||+++.. ..++..+.|+.|+..+++-+|.||+-+.||+..+..
T Consensus 385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~wh--GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~ 462 (678)
T KOG0193|consen 385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWH--GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL 462 (678)
T ss_pred cccccCHHHhhccceeccccccceeecccc--cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce
Confidence 334444555667799999999999999995 36999999744 344578899999999999999999999999998877
Q ss_pred eEEEEeecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC-----
Q 045127 310 RAIVTEWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE----- 382 (508)
Q Consensus 310 ~~lv~e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~----- 382 (508)
.||+.+|+|-+|+.+++ +..++..+..+||.||++|+.|||.+ +|||||||..||++.++++|||+|||++
T Consensus 463 -AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK-~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~ 540 (678)
T KOG0193|consen 463 -AIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAK-NIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTR 540 (678)
T ss_pred -eeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhh-hhhhhhccccceEEccCCcEEEecccceeeeee
Confidence 99999999999999999 77889999999999999999999999 9999999999999999999999999873
Q ss_pred ---------------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhh
Q 045127 383 ---------------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVD 435 (508)
Q Consensus 383 ---------------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (508)
..+++.+||||||+++|||+||..||.....+.. +.. +... .+.
T Consensus 541 w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqI-ifm-VGrG-------~l~ 611 (678)
T KOG0193|consen 541 WSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQI-IFM-VGRG-------YLM 611 (678)
T ss_pred eccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhhe-EEE-eccc-------ccC
Confidence 3678899999999999999999999983222211 100 0000 001
Q ss_pred hcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhCCCCCC
Q 045127 436 ERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSCPILTS 488 (508)
Q Consensus 436 ~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~ 488 (508)
+.+. .....+.+++.+|+..||..++++||.+.+|+.+|+.+..+.+....
T Consensus 612 pd~s--~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~~pki~R 662 (678)
T KOG0193|consen 612 PDLS--KIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLPSLPKINR 662 (678)
T ss_pred ccch--hhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhhccccccc
Confidence 1110 01123466788888999999999999999999999999886655443
|
|
| >KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-39 Score=299.84 Aligned_cols=236 Identities=15% Similarity=0.153 Sum_probs=184.2
Q ss_pred cCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCC-HHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEe
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVS-REIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTE 315 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 315 (508)
+.|+...++|+|+||.||+++.+ +|+.||||++..... +...+-.++|+++|++++|||+|.++.+|......++|+|
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE 81 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE 81 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence 46888899999999999999985 599999999975444 4456677999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-----------
Q 045127 316 WTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY----------- 383 (508)
Q Consensus 316 ~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~----------- 383 (508)
||+..-|.++-+ ...++.+.+.++++|++.|+.|+|++ ++|||||||+||||+.++.+|+||||+++
T Consensus 82 ~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~-n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~YTD 160 (396)
T KOG0593|consen 82 YCDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKN-NCIHRDIKPENILITQNGVVKLCDFGFARTLSAPGDNYTD 160 (396)
T ss_pred ecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhc-CeecccCChhheEEecCCcEEeccchhhHhhcCCcchhhh
Confidence 998754444433 67889999999999999999999999 99999999999999999999999999852
Q ss_pred -----------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCccc-HHHHHHHhccchhhhhhhh---------
Q 045127 384 -----------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAG-FIEYIRMHYPENLQLVVDE--------- 436 (508)
Q Consensus 384 -----------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--------- 436 (508)
+|....||||+||++.||++|.+-|.+.++-+.- .....-..+.+.-..++..
T Consensus 161 YVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~l 240 (396)
T KOG0593|consen 161 YVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRL 240 (396)
T ss_pred hhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeec
Confidence 5667899999999999999999999865432211 1111111111111222211
Q ss_pred -cccCCcc----hHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 437 -RMMLTEN----MFDQAEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 437 -~l~~~~~----~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
.....+. ......-+++++..|++.||++|++.++++.
T Consensus 241 P~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 241 PEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred CCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 1111110 1122446789999999999999999999985
|
|
| >KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-40 Score=300.81 Aligned_cols=227 Identities=17% Similarity=0.176 Sum_probs=181.8
Q ss_pred cCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecC-CCCHHHHHHHHHHHHHHhhcCCCCccceeeE-EecC-CeeEEE
Q 045127 238 NGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKG-DVSREIRDEFVEECKLLVQFQHKNLIRVLGW-NNSR-RTRAIV 313 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~-~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~-~~~~-~~~~lv 313 (508)
.+|++.++||+|.||+||++.. .+|..||.|.+.- ......++.+..|+.+|++++|||||+++++ +.++ +..+||
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlniv 98 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIV 98 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHH
Confidence 4577889999999999999985 7899999999863 3344578889999999999999999999984 3333 447999
Q ss_pred EeecCCCCHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHhhCC-C--ccccCCCCCCEEecCCCceEEeeccCC---
Q 045127 314 TEWTNGGNVELWLS-----ESAPSWKHRLKVLIGVVEAMCYLQEQW-P--EVDYDLRTGSVLLTDNLEPLISRFKIE--- 382 (508)
Q Consensus 314 ~e~~~~gsL~~~l~-----~~~l~~~~~~~i~~~i~~~L~~LH~~~-~--iiH~Dlkp~NIll~~~~~~kl~Dfg~~--- 382 (508)
||||.+|+|.++++ +..+++..+++++.|++.||..+|+.. + |+||||||.||+++.+|.+|++|||++
T Consensus 99 mE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l 178 (375)
T KOG0591|consen 99 MELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFL 178 (375)
T ss_pred HHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHh
Confidence 99999999999998 678999999999999999999999933 4 899999999999999999999999984
Q ss_pred ------------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcc
Q 045127 383 ------------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERM 438 (508)
Q Consensus 383 ------------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 438 (508)
..|+.|+||||+||++|||..-+.||.+.. -..+.+-+... ..
T Consensus 179 ~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n--~~~L~~KI~qg-----------d~ 245 (375)
T KOG0591|consen 179 SSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDN--LLSLCKKIEQG-----------DY 245 (375)
T ss_pred cchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCccccc--HHHHHHHHHcC-----------CC
Confidence 467889999999999999999999998531 11111111111 11
Q ss_pred cCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHH
Q 045127 439 MLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITR 478 (508)
Q Consensus 439 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 478 (508)
.. -....-...+.+++..|+..||..||+...++..+..
T Consensus 246 ~~-~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~ 284 (375)
T KOG0591|consen 246 PP-LPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQS 284 (375)
T ss_pred CC-CcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence 00 0112336677888999999999999996555555544
|
|
| >KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=339.01 Aligned_cols=231 Identities=23% Similarity=0.342 Sum_probs=198.2
Q ss_pred CCCCCceeeecCCeEEEEEEEC------CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEE
Q 045127 239 GFSKKNLVGKNEGAAIYKGILR------DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAI 312 (508)
Q Consensus 239 ~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 312 (508)
+....+.||+|+||+||+|+.. +...||||.++.....+..++|++|++++..++|||||+++|+|..++..++
T Consensus 487 ~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~M 566 (774)
T KOG1026|consen 487 DIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLCM 566 (774)
T ss_pred heeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeEE
Confidence 3345588999999999999852 3468999999888887789999999999999999999999999999999999
Q ss_pred EEeecCCCCHHHHhc-----------cCC----CCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEe
Q 045127 313 VTEWTNGGNVELWLS-----------ESA----PSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLIS 377 (508)
Q Consensus 313 v~e~~~~gsL~~~l~-----------~~~----l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~ 377 (508)
|+|||..|||.++|. +.. ++..+.+.||.|||.|++||-++ .+|||||-.+|+||.++..+||+
T Consensus 567 vFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~-~FVHRDLATRNCLVge~l~VKIs 645 (774)
T KOG1026|consen 567 VFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH-HFVHRDLATRNCLVGENLVVKIS 645 (774)
T ss_pred EEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC-cccccchhhhhceeccceEEEec
Confidence 999999999999997 223 78889999999999999999999 99999999999999999999999
Q ss_pred eccCC-----------------------------CCCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhcc
Q 045127 378 RFKIE-----------------------------YQHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYP 427 (508)
Q Consensus 378 Dfg~~-----------------------------~~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~ 427 (508)
|||++ +++|++||||||||+|||+++ |+.||.+..+++ ..+.++
T Consensus 646 DfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~E--VIe~i~---- 719 (774)
T KOG1026|consen 646 DFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQE--VIECIR---- 719 (774)
T ss_pred ccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHH--HHHHHH----
Confidence 99985 467899999999999999998 999998776554 222222
Q ss_pred chhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhCCC
Q 045127 428 ENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSCPI 485 (508)
Q Consensus 428 ~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~ 485 (508)
+..+ -+..+.++.++.+|+..||+.+|++||++.||-..|+......+.
T Consensus 720 -------~g~l--L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s~~ 768 (774)
T KOG1026|consen 720 -------AGQL--LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQASPK 768 (774)
T ss_pred -------cCCc--ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcCcc
Confidence 1122 112234578889999999999999999999999999988766543
|
|
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-38 Score=317.79 Aligned_cols=231 Identities=16% Similarity=0.274 Sum_probs=184.8
Q ss_pred hcCCCCCceeeecCCeEEEEEEE------CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhc-CCCCccceeeEEecC-C
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGIL------RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQF-QHKNLIRVLGWNNSR-R 308 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~-~ 308 (508)
.++|+..+.||+|+||.||+|.+ .+++.||+|++...........+.+|+.++.++ +||||+++++++... .
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNG 85 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCC
Confidence 46788999999999999999974 235689999997655555567899999999999 899999999988764 4
Q ss_pred eeEEEEeecCCCCHHHHhcc------------------------------------------------------------
Q 045127 309 TRAIVTEWTNGGNVELWLSE------------------------------------------------------------ 328 (508)
Q Consensus 309 ~~~lv~e~~~~gsL~~~l~~------------------------------------------------------------ 328 (508)
..+++|||+++|+|.+++..
T Consensus 86 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (338)
T cd05102 86 PLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDD 165 (338)
T ss_pred ceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccc
Confidence 57899999999999998862
Q ss_pred ---CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC----------------------
Q 045127 329 ---SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY---------------------- 383 (508)
Q Consensus 329 ---~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~---------------------- 383 (508)
..+++.++..++.||++||+|||++ ||+||||||+||+++.++.+||+|||++.
T Consensus 166 ~~~~~l~~~~~~~~~~qi~~aL~~LH~~-~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~a 244 (338)
T cd05102 166 LWKSPLTMEDLICYSFQVARGMEFLASR-KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMA 244 (338)
T ss_pred cccCCCCHHHHHHHHHHHHHHHHHHHHC-CEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccC
Confidence 2377888999999999999999999 99999999999999999999999998642
Q ss_pred -------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHHHHHHHHH
Q 045127 384 -------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQAEQGLGLG 455 (508)
Q Consensus 384 -------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~ 455 (508)
.++.++|||||||++|||++ |..||....... .+........ .... . ......+.+++
T Consensus 245 PE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~-~~~~~~~~~~--------~~~~--~---~~~~~~l~~li 310 (338)
T cd05102 245 PESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINE-EFCQRLKDGT--------RMRA--P---ENATPEIYRIM 310 (338)
T ss_pred cHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccH-HHHHHHhcCC--------CCCC--C---CCCCHHHHHHH
Confidence 23568999999999999997 999997533221 1111111000 0000 0 11234677899
Q ss_pred HhcCCCCCCCCCCHHHHHHHHHHHHhh
Q 045127 456 LMCTDQPTGKLPSLVQIYNMITRAYKS 482 (508)
Q Consensus 456 ~~Cl~~dP~~RPs~~evl~~L~~i~~~ 482 (508)
.+||+.||++|||+.|+++.|+++...
T Consensus 311 ~~cl~~dp~~RPs~~el~~~l~~~~~~ 337 (338)
T cd05102 311 LACWQGDPKERPTFSALVEILGDLLQE 337 (338)
T ss_pred HHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 999999999999999999999988753
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-38 Score=303.69 Aligned_cols=233 Identities=12% Similarity=0.197 Sum_probs=192.5
Q ss_pred hhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEE
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVT 314 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 314 (508)
..++|+..+.||.|..++||+|+. +.++.||||++.-+......+.+.+|+..|+.++||||++++..|..++..++||
T Consensus 24 n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVm 103 (516)
T KOG0582|consen 24 NAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVM 103 (516)
T ss_pred CccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEee
Confidence 457899999999999999999995 6789999999986666656889999999999999999999999999999999999
Q ss_pred eecCCCCHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC---------
Q 045127 315 EWTNGGNVELWLS---ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE--------- 382 (508)
Q Consensus 315 e~~~~gsL~~~l~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~--------- 382 (508)
.||.+|++.+.++ ...+++..+..|.+++++||.|||++ |.||||||+.||||+.+|.+||+|||.+
T Consensus 104 pfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~-G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~R 182 (516)
T KOG0582|consen 104 PFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQN-GHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGDR 182 (516)
T ss_pred hhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhc-CceecccccccEEEcCCCcEEEcCceeeeeecccCce
Confidence 9999999999998 66799999999999999999999999 9999999999999999999999999642
Q ss_pred ------------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcc
Q 045127 383 ------------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERM 438 (508)
Q Consensus 383 ------------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 438 (508)
..|+.|+||||||++..||.+|..||..+.....-+. .+....+... -..
T Consensus 183 ~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~-----tLqn~pp~~~-t~~ 256 (516)
T KOG0582|consen 183 QVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLL-----TLQNDPPTLL-TSG 256 (516)
T ss_pred eeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHH-----HhcCCCCCcc-ccc
Confidence 3567899999999999999999999987654332111 1111111000 000
Q ss_pred cCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 439 MLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 439 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
...+........+.+++..|++.||.+|||++++++.
T Consensus 257 ~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh 293 (516)
T KOG0582|consen 257 LDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKH 293 (516)
T ss_pred CChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhcc
Confidence 1111112334577889999999999999999999863
|
|
| >KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-39 Score=314.89 Aligned_cols=237 Identities=14% Similarity=0.140 Sum_probs=188.6
Q ss_pred hhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcC-CCCccceeeEEecCC-eeEE
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQ-HKNLIRVLGWNNSRR-TRAI 312 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~-~~~l 312 (508)
..++|...++||.|.||.||+|+. .+|..||||.++......+.-.-.+|+..|+++. ||||+++.+++.+.+ ..|+
T Consensus 8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~f 87 (538)
T KOG0661|consen 8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYF 87 (538)
T ss_pred HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEee
Confidence 456788899999999999999995 5789999999987655544455579999999998 999999999998887 8999
Q ss_pred EEeecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-------
Q 045127 313 VTEWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------- 383 (508)
Q Consensus 313 v~e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------- 383 (508)
|||||+. +|.++++ ...+++..+..|+.||++||+|+|.+ |+.|||+||+|||+.....+||+|||+++
T Consensus 88 VfE~Md~-NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~-GfFHRDlKPENiLi~~~~~iKiaDFGLARev~SkpP 165 (538)
T KOG0661|consen 88 VFEFMDC-NLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKH-GFFHRDLKPENILISGNDVIKIADFGLAREVRSKPP 165 (538)
T ss_pred eHHhhhh-hHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhc-CcccccCChhheEecccceeEecccccccccccCCC
Confidence 9999965 9999998 67799999999999999999999999 99999999999999999999999999853
Q ss_pred --------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHH-------HHhccch--hhhhh
Q 045127 384 --------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYI-------RMHYPEN--LQLVV 434 (508)
Q Consensus 384 --------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~-------~~~~~~~--~~~~~ 434 (508)
.|+.+.||||+|||++|+.+-++-|.+..+-++ +.+.. +..+++. +...+
T Consensus 166 YTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dq-i~KIc~VLGtP~~~~~~eg~~La~~m 244 (538)
T KOG0661|consen 166 YTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQ-IYKICEVLGTPDKDSWPEGYNLASAM 244 (538)
T ss_pred cchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHH-HHHHHHHhCCCccccchhHHHHHHHh
Confidence 467789999999999999999998876543221 11111 1111111 11111
Q ss_pred hhcccCCc------chHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 435 DERMMLTE------NMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 435 ~~~l~~~~------~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
.-++.... -......+.++++.+|+++||++||||+|.+++
T Consensus 245 nf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 245 NFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred ccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 11111000 001246778899999999999999999999986
|
|
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-39 Score=327.66 Aligned_cols=242 Identities=23% Similarity=0.380 Sum_probs=206.7
Q ss_pred CCCHHHHHHhhcCC---------CCCceeeecCCeEEEEEEEC----CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcC
Q 045127 227 KFTTWMLKAATNGF---------SKKNLVGKNEGAAIYKGILR----DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQ 293 (508)
Q Consensus 227 ~~~~~~l~~~~~~~---------~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~ 293 (508)
.+||+|--++...| .+.++||.|.||.||+|+++ ....||||.++....+..+.+|..|+.+|.+++
T Consensus 609 P~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFd 688 (996)
T KOG0196|consen 609 PHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFD 688 (996)
T ss_pred CccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCC
Confidence 45676655555444 46799999999999999973 246899999999888889999999999999999
Q ss_pred CCCccceeeEEecCCeeEEEEeecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCC
Q 045127 294 HKNLIRVLGWNNSRRTRAIVTEWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDN 371 (508)
Q Consensus 294 h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~ 371 (508)
||||+++-|+.......+||+|||++|+|+.+++ ++.+++.+...+.++|+.|++||-+. ++|||||..+|||++.+
T Consensus 689 HPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm-~YVHRDLAARNILVNsn 767 (996)
T KOG0196|consen 689 HPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDM-NYVHRDLAARNILVNSN 767 (996)
T ss_pred CCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhc-Cchhhhhhhhheeeccc
Confidence 9999999999999999999999999999999998 67799999999999999999999999 99999999999999999
Q ss_pred CceEEeeccCC------------------------------CCCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHH
Q 045127 372 LEPLISRFKIE------------------------------YQHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIE 420 (508)
Q Consensus 372 ~~~kl~Dfg~~------------------------------~~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~ 420 (508)
..+|++|||++ ++++.++|||||||+|||.++ |+.||-++++.+ ..+
T Consensus 768 LvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQd--VIk 845 (996)
T KOG0196|consen 768 LVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD--VIK 845 (996)
T ss_pred eEEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHH--HHH
Confidence 99999999985 345778999999999999887 999998776443 222
Q ss_pred HHHHhccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhCC
Q 045127 421 YIRMHYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSCP 484 (508)
Q Consensus 421 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 484 (508)
.++..+ ++ + ...+++..+.+||+.||++|-.+||.+.+|+..|.++.....
T Consensus 846 aIe~gy----------RL--P-pPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrnP~ 896 (996)
T KOG0196|consen 846 AIEQGY----------RL--P-PPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRNPN 896 (996)
T ss_pred HHHhcc----------CC--C-CCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCch
Confidence 222222 11 1 123567889999999999999999999999999999866533
|
|
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-37 Score=302.38 Aligned_cols=235 Identities=20% Similarity=0.266 Sum_probs=185.6
Q ss_pred CCCCHHHHHHhhcCCCCCceeeecCCeEEEEEEECCCCEEEEEEecCCCCH--HHHHHHHHHHHHHhhcCCCCccceeeE
Q 045127 226 HKFTTWMLKAATNGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSR--EIRDEFVEECKLLVQFQHKNLIRVLGW 303 (508)
Q Consensus 226 ~~~~~~~l~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~ 303 (508)
+.++.+++ +......||+|++|.||+|.+ +|+.||||.++..... ...+.+.+|+.++++++||||++++++
T Consensus 13 ~~i~~~~i-----~~~~~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~ 86 (283)
T PHA02988 13 KCIESDDI-----DKYTSVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGF 86 (283)
T ss_pred eecCHHHc-----CCCCCeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeee
Confidence 44455555 223347899999999999998 5889999999654322 235778899999999999999999999
Q ss_pred Eec----CCeeEEEEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEee
Q 045127 304 NNS----RRTRAIVTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISR 378 (508)
Q Consensus 304 ~~~----~~~~~lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~D 378 (508)
+.+ ....++||||+++|+|.+++. ...+++....+++.|++.||+|||+..+++||||||+||++++++.+||+|
T Consensus 87 ~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~d 166 (283)
T PHA02988 87 IIDIVDDLPRLSLILEYCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIIC 166 (283)
T ss_pred EEecccCCCceEEEEEeCCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEcc
Confidence 876 346799999999999999998 567899999999999999999999843899999999999999999999999
Q ss_pred ccCCC--------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhh
Q 045127 379 FKIEY--------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQL 432 (508)
Q Consensus 379 fg~~~--------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (508)
||++. .++.++|||||||++|||++|+.||...... .+...+. ...
T Consensus 167 fg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~--~~~~~i~---~~~--- 238 (283)
T PHA02988 167 HGLEKILSSPPFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTK--EIYDLII---NKN--- 238 (283)
T ss_pred cchHhhhccccccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHH--HHHHHHH---hcC---
Confidence 98632 4567899999999999999999999754211 1111110 000
Q ss_pred hhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHH
Q 045127 433 VVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAY 480 (508)
Q Consensus 433 ~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~ 480 (508)
...... ......+.+++.+||+.||++|||++|+++.|+...
T Consensus 239 ---~~~~~~---~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~ 280 (283)
T PHA02988 239 ---NSLKLP---LDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYK 280 (283)
T ss_pred ---CCCCCC---CcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHH
Confidence 011111 122456788999999999999999999999998765
|
|
| >KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-38 Score=304.36 Aligned_cols=226 Identities=18% Similarity=0.281 Sum_probs=179.6
Q ss_pred cCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCC--eeEEEE
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRR--TRAIVT 314 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~lv~ 314 (508)
.++...+.||+|+||.||.+... +|+..|||......... .+.+.+|+.+|++++|||||+++|...... .++++|
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~-~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~m 95 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPT-SESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFM 95 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchh-HHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeee
Confidence 45777899999999999999974 58999999996553332 677899999999999999999999855444 689999
Q ss_pred eecCCCCHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecC-CCceEEeeccCCC--------
Q 045127 315 EWTNGGNVELWLSE--SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTD-NLEPLISRFKIEY-------- 383 (508)
Q Consensus 315 e~~~~gsL~~~l~~--~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~-~~~~kl~Dfg~~~-------- 383 (508)
||+++|+|.+++.. ..+++..+.+++.||++||+|||++ ||+||||||+|||++. ++.+||+|||.+.
T Consensus 96 Ey~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~-g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~ 174 (313)
T KOG0198|consen 96 EYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSK-GIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGTK 174 (313)
T ss_pred eccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC-CEeccCcccceEEEeCCCCeEEeccCcccccccccccc
Confidence 99999999999983 2699999999999999999999999 9999999999999999 7999999998632
Q ss_pred ---------------------C--CCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccC
Q 045127 384 ---------------------Q--HRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMML 440 (508)
Q Consensus 384 ---------------------~--~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 440 (508)
. ...++|||||||++.||+||+.||.... ....+.-...... .-|.+.
T Consensus 175 ~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~----~~~~~~~~ig~~~----~~P~ip- 245 (313)
T KOG0198|consen 175 SDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFF----EEAEALLLIGRED----SLPEIP- 245 (313)
T ss_pred ccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhc----chHHHHHHHhccC----CCCCCC-
Confidence 1 1138999999999999999999998531 1111111111111 001111
Q ss_pred CcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHH
Q 045127 441 TENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITR 478 (508)
Q Consensus 441 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 478 (508)
........+++.+|++.||++||||+++++..-.
T Consensus 246 ----~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~ 279 (313)
T KOG0198|consen 246 ----DSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFL 279 (313)
T ss_pred ----cccCHHHHHHHHHHhhcCcccCcCHHHHhhChhh
Confidence 1124456678889999999999999999987543
|
|
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-37 Score=306.20 Aligned_cols=232 Identities=23% Similarity=0.351 Sum_probs=182.4
Q ss_pred cCCCCCceeeecCCeEEEEEEECC-----------------CCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccce
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILRD-----------------GTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRV 300 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~~-----------------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 300 (508)
++|...++||+|+||.||+|.+.+ +..||+|.+...........+.+|++++.+++||||+++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 84 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL 84 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence 578888999999999999998532 336999999766555567789999999999999999999
Q ss_pred eeEEecCCeeEEEEeecCCCCHHHHhcc--------------------CCCCHHHHHHHHHHHHHHHHHHhhCCCccccC
Q 045127 301 LGWNNSRRTRAIVTEWTNGGNVELWLSE--------------------SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYD 360 (508)
Q Consensus 301 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~--------------------~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~D 360 (508)
++++...+..++||||+++|+|.+++.. ..+++..+.+++.||+.||+|||+. ||+|||
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~-~ivH~d 163 (304)
T cd05096 85 LGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL-NFVHRD 163 (304)
T ss_pred EEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC-CccccC
Confidence 9999998999999999999999998862 2367888999999999999999999 999999
Q ss_pred CCCCCEEecCCCceEEeeccCCC-----------------------------CCCCcchhhHHHHHHHHHHh--CCCCCc
Q 045127 361 LRTGSVLLTDNLEPLISRFKIEY-----------------------------QHRSTKYVYKFGLFLLEMIT--NRRPLE 409 (508)
Q Consensus 361 lkp~NIll~~~~~~kl~Dfg~~~-----------------------------~~~~~~Dv~SlGvil~ellt--g~~P~~ 409 (508)
|||+||+++.++.+||+|||++. .++.++||||||+++|||++ +..||.
T Consensus 164 lkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~ 243 (304)
T cd05096 164 LATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYG 243 (304)
T ss_pred cchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCC
Confidence 99999999999999999998742 23567899999999999987 567776
Q ss_pred ccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHH
Q 045127 410 EFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITR 478 (508)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 478 (508)
..... .....+............ .... ......+.+++.+||+.||++|||+.||.+.|++
T Consensus 244 ~~~~~--~~~~~~~~~~~~~~~~~~---~~~~---~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~~ 304 (304)
T cd05096 244 ELTDE--QVIENAGEFFRDQGRQVY---LFRP---PPCPQGLYELMLQCWSRDCRERPSFSDIHAFLTE 304 (304)
T ss_pred cCCHH--HHHHHHHHHhhhcccccc---ccCC---CCCCHHHHHHHHHHccCCchhCcCHHHHHHHHhC
Confidence 43221 111111111111000000 0000 1224567889999999999999999999988863
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-37 Score=298.76 Aligned_cols=227 Identities=24% Similarity=0.358 Sum_probs=186.2
Q ss_pred hcCCCCCceeeecCCeEEEEEEEC----CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEE
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGILR----DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAI 312 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 312 (508)
.++|+..+.||+|+||.||+|.+. .+..||+|.++..........+.+|+..+++++||||+++++++..+...++
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 83 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMI 83 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEE
Confidence 356888899999999999999863 3578999999866555566789999999999999999999999999999999
Q ss_pred EEeecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC--------
Q 045127 313 VTEWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE-------- 382 (508)
Q Consensus 313 v~e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~-------- 382 (508)
||||+++|+|.+++. ...+++..+..++.|++.||+|||++ +++||||||+||+++.++.++++|||..
T Consensus 84 v~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~-~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~~ 162 (266)
T cd05064 84 VTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEM-GYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAI 162 (266)
T ss_pred EEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC-CEeeccccHhhEEEcCCCcEEECCCcccccccccch
Confidence 999999999999987 35789999999999999999999999 9999999999999999999999999752
Q ss_pred --------------------CCCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCC
Q 045127 383 --------------------YQHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLT 441 (508)
Q Consensus 383 --------------------~~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 441 (508)
..++.++|||||||++||+++ |+.||...... .+.+.+.... .....
T Consensus 163 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~--~~~~~~~~~~----------~~~~~ 230 (266)
T cd05064 163 YTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQ--DVIKAVEDGF----------RLPAP 230 (266)
T ss_pred hcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHH--HHHHHHHCCC----------CCCCC
Confidence 123567999999999999875 99999754221 1111111110 00001
Q ss_pred cchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHH
Q 045127 442 ENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRA 479 (508)
Q Consensus 442 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i 479 (508)
......+.+++.+||+.+|++||++++|.+.|.++
T Consensus 231 ---~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 231 ---RNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred ---CCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 12245677899999999999999999999998765
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-37 Score=311.16 Aligned_cols=231 Identities=19% Similarity=0.307 Sum_probs=191.4
Q ss_pred CCCCCceeeecCCeEEEEEEEC--CC---CEEEEEEecC--CCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeE
Q 045127 239 GFSKKNLVGKNEGAAIYKGILR--DG---TRVKIEIYKG--DVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRA 311 (508)
Q Consensus 239 ~~~~~~~lg~G~~g~V~~~~~~--~~---~~vavK~~~~--~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 311 (508)
+-...++||+|+||.||+|.+. ++ ..||||..+. ........+|.+|+++|++++|||||+++|++......+
T Consensus 158 ~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~ 237 (474)
T KOG0194|consen 158 DIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLM 237 (474)
T ss_pred CccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccE
Confidence 3344589999999999999973 33 2389999974 355677899999999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC-------
Q 045127 312 IVTEWTNGGNVELWLSE--SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE------- 382 (508)
Q Consensus 312 lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~------- 382 (508)
+|||+|.||+|.+++++ ..++..++..++.+.|.||+|||++ +++||||-.+|+|++.++.+||+|||++
T Consensus 238 ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k-~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~~~ 316 (474)
T KOG0194|consen 238 LVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSK-NCIHRDIAARNCLYSKKGVVKISDFGLSRAGSQYV 316 (474)
T ss_pred EEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHC-CCcchhHhHHHheecCCCeEEeCccccccCCccee
Confidence 99999999999999993 3599999999999999999999999 9999999999999999999999999985
Q ss_pred --------------------CCCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHH-HHhccchhhhhhhhcccC
Q 045127 383 --------------------YQHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYI-RMHYPENLQLVVDERMML 440 (508)
Q Consensus 383 --------------------~~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~ 440 (508)
..++.++|||||||++||+++ |..||.+.... .+..++ ...++- ..
T Consensus 317 ~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~--~v~~kI~~~~~r~----------~~ 384 (474)
T KOG0194|consen 317 MKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNY--EVKAKIVKNGYRM----------PI 384 (474)
T ss_pred eccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHH--HHHHHHHhcCccC----------CC
Confidence 345789999999999999999 88899865432 222222 212111 11
Q ss_pred CcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhCCC
Q 045127 441 TENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSCPI 485 (508)
Q Consensus 441 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~ 485 (508)
+. .....+..++.+||..+|++||||.++.+.++.+......
T Consensus 385 ~~---~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~~ 426 (474)
T KOG0194|consen 385 PS---KTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKEA 426 (474)
T ss_pred CC---CCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhcccc
Confidence 11 2245566677799999999999999999999999877664
|
|
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-37 Score=312.14 Aligned_cols=228 Identities=19% Similarity=0.260 Sum_probs=184.4
Q ss_pred hcCCCCCceeeecCCeEEEEEEE------CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhc-CCCCccceeeEEecCCe
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGIL------RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQF-QHKNLIRVLGWNNSRRT 309 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 309 (508)
.++|+..+.||+|+||.||+|.+ .++..||||+++........+.+.+|+.+++.+ +||||+++++++..+..
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~ 113 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGP 113 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCc
Confidence 34688899999999999999974 235689999997555444567889999999999 89999999999999999
Q ss_pred eEEEEeecCCCCHHHHhcc-------------------------------------------------------------
Q 045127 310 RAIVTEWTNGGNVELWLSE------------------------------------------------------------- 328 (508)
Q Consensus 310 ~~lv~e~~~~gsL~~~l~~------------------------------------------------------------- 328 (508)
.++||||+++|+|.+++..
T Consensus 114 ~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (375)
T cd05104 114 TLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGS 193 (375)
T ss_pred ceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccce
Confidence 9999999999999988852
Q ss_pred ---------------CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC----------
Q 045127 329 ---------------SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY---------- 383 (508)
Q Consensus 329 ---------------~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~---------- 383 (508)
..+++..+.+++.||+.||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 194 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~ 272 (375)
T cd05104 194 YIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK-NCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVV 272 (375)
T ss_pred ecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCchhhEEEECCCcEEEecCccceeccCcccccc
Confidence 1468888999999999999999999 99999999999999999999999998642
Q ss_pred -------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcc
Q 045127 384 -------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTEN 443 (508)
Q Consensus 384 -------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 443 (508)
.++.++|||||||++|||++ |..||....... .+.+.+...... . ..
T Consensus 273 ~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~-~~~~~~~~~~~~--------~--~~-- 339 (375)
T cd05104 273 KGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDS-KFYKMIKEGYRM--------L--SP-- 339 (375)
T ss_pred cCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchH-HHHHHHHhCccC--------C--CC--
Confidence 24568999999999999998 889987543221 122222211100 0 00
Q ss_pred hHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHH
Q 045127 444 MFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRA 479 (508)
Q Consensus 444 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i 479 (508)
.....++.+++.+||+.||++|||+.||++.|++.
T Consensus 340 -~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 340 -ECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred -CCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 01134677899999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-37 Score=303.65 Aligned_cols=235 Identities=14% Similarity=0.162 Sum_probs=182.5
Q ss_pred hhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCC-CHHHHHHHHHHHHHHhhcCCCCccceeeEEecC--CeeE
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDV-SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSR--RTRA 311 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~ 311 (508)
..+.|+..++||+|.||.||+|+. .+|+.||+|+++-+. .+....-..+|+.+|++|+||||+++.+...+. ..+|
T Consensus 115 ~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siY 194 (560)
T KOG0600|consen 115 RADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIY 194 (560)
T ss_pred chHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEE
Confidence 445677889999999999999996 679999999997544 233456678999999999999999999988765 6899
Q ss_pred EEEeecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC------
Q 045127 312 IVTEWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------ 383 (508)
Q Consensus 312 lv~e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------ 383 (508)
+|+|||+. +|.-++. .-.+++.++..++.|++.||+|+|++ ||+|||||.+|||||.+|.+||+|||+++
T Consensus 195 lVFeYMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~-gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~ 272 (560)
T KOG0600|consen 195 LVFEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSR-GVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSG 272 (560)
T ss_pred EEEecccc-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhc-CeeeccccccceEEcCCCCEEeccccceeeccCCC
Confidence 99999987 8888887 45899999999999999999999999 99999999999999999999999999863
Q ss_pred -----------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccc--hh------h-
Q 045127 384 -----------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPE--NL------Q- 431 (508)
Q Consensus 384 -----------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~--~~------~- 431 (508)
.|+.+.|+||.||||.||++|++.|.+...- .++...++..-.. .. .
T Consensus 273 ~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEv-eQl~kIfklcGSP~e~~W~~~kLP~ 351 (560)
T KOG0600|consen 273 SAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEV-EQLHKIFKLCGSPTEDYWPVSKLPH 351 (560)
T ss_pred CcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHH-HHHHHHHHHhCCCChhccccccCCc
Confidence 4567889999999999999999999754321 1222222211111 00 0
Q ss_pred -hhhhhcccCCcc-----hHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 432 -LVVDERMMLTEN-----MFDQAEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 432 -~~~~~~l~~~~~-----~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
..+.+.- .+.. ........++++..+|..||++|.|+.++++
T Consensus 352 ~~~~kp~~-~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~ 399 (560)
T KOG0600|consen 352 ATIFKPQQ-PYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ 399 (560)
T ss_pred ccccCCCC-cccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence 1111110 0000 0112445677888899999999999998875
|
|
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=298.49 Aligned_cols=238 Identities=16% Similarity=0.218 Sum_probs=185.3
Q ss_pred CCCceeeecCCeEEEEEEE-----CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecC--CeeEEE
Q 045127 241 SKKNLVGKNEGAAIYKGIL-----RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSR--RTRAIV 313 (508)
Q Consensus 241 ~~~~~lg~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~lv 313 (508)
+..+.||+|+||.||.+.. .++..||+|.++..........+.+|++++++++||||+++++++... ...+++
T Consensus 7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 86 (283)
T cd05080 7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLI 86 (283)
T ss_pred eeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEE
Confidence 7889999999999988753 357899999997655544567889999999999999999999987653 457899
Q ss_pred EeecCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC----------
Q 045127 314 TEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY---------- 383 (508)
Q Consensus 314 ~e~~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~---------- 383 (508)
|||+++++|.+++....+++.++..++.|++.||+|||++ +++||||||+||++++++.++|+|||.+.
T Consensus 87 ~e~~~~~~l~~~~~~~~l~~~~~~~i~~~l~~~l~~lH~~-~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~ 165 (283)
T cd05080 87 MEYVPLGSLRDYLPKHKLNLAQLLLFAQQICEGMAYLHSQ-HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYR 165 (283)
T ss_pred ecCCCCCCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHC-CeeccccChheEEEcCCCcEEEeecccccccCCcchhhc
Confidence 9999999999999877899999999999999999999999 99999999999999999999999998742
Q ss_pred --------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhc-cchhhhhhhhcccCCc
Q 045127 384 --------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHY-PENLQLVVDERMMLTE 442 (508)
Q Consensus 384 --------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~ 442 (508)
.++.++||||||+++|||+||+.||.................. .....+..+..... .
T Consensus 166 ~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 244 (283)
T cd05080 166 VREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMRL-P 244 (283)
T ss_pred cCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcCCCC-C
Confidence 2356789999999999999999998643221111110000000 00111112111110 0
Q ss_pred chHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHH
Q 045127 443 NMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAY 480 (508)
Q Consensus 443 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~ 480 (508)
........+.+++.+||+.+|++|||++++++.|+++.
T Consensus 245 ~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 245 CPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred CCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 01123467888999999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-37 Score=311.89 Aligned_cols=230 Identities=19% Similarity=0.300 Sum_probs=185.9
Q ss_pred hhcCCCCCceeeecCCeEEEEEEEC------CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhc-CCCCccceeeEEecCC
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGILR------DGTRVKIEIYKGDVSREIRDEFVEECKLLVQF-QHKNLIRVLGWNNSRR 308 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 308 (508)
..++|+..+.||+|+||.||+|.+. ++..||+|+++..........+.+|+++++.+ +||||+++++++....
T Consensus 36 ~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~ 115 (374)
T cd05106 36 PRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGG 115 (374)
T ss_pred cHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCC
Confidence 3457889999999999999999852 23579999997665555667889999999999 8999999999999999
Q ss_pred eeEEEEeecCCCCHHHHhcc------------------------------------------------------------
Q 045127 309 TRAIVTEWTNGGNVELWLSE------------------------------------------------------------ 328 (508)
Q Consensus 309 ~~~lv~e~~~~gsL~~~l~~------------------------------------------------------------ 328 (508)
..++||||+++|+|.+++..
T Consensus 116 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (374)
T cd05106 116 PVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSS 195 (374)
T ss_pred CeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccc
Confidence 99999999999999998751
Q ss_pred -----------CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC--------------
Q 045127 329 -----------SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY-------------- 383 (508)
Q Consensus 329 -----------~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~-------------- 383 (508)
..+++.++.+++.||++||+|||++ ||+||||||+||++++++.+||+|||++.
T Consensus 196 ~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~-giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~ 274 (374)
T cd05106 196 DSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK-NCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNA 274 (374)
T ss_pred cccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC-CEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCC
Confidence 2467888999999999999999999 99999999999999999999999998742
Q ss_pred ---------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHH
Q 045127 384 ---------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQ 447 (508)
Q Consensus 384 ---------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 447 (508)
.++.++|||||||++|||++ |+.||....... .+......... .... . ..
T Consensus 275 ~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~-~~~~~~~~~~~--------~~~~--~---~~ 340 (374)
T cd05106 275 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS-KFYKMVKRGYQ--------MSRP--D---FA 340 (374)
T ss_pred CCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccH-HHHHHHHcccC--------ccCC--C---CC
Confidence 24568999999999999997 999997543221 11111111110 0000 0 11
Q ss_pred HHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHH
Q 045127 448 AEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAY 480 (508)
Q Consensus 448 ~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~ 480 (508)
...+.+++.+||+.||++|||+.+|++.|+++.
T Consensus 341 ~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 341 PPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 356778999999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-37 Score=296.13 Aligned_cols=218 Identities=22% Similarity=0.416 Sum_probs=173.8
Q ss_pred CceeeecCCeEEEEEEEC-----CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEeec
Q 045127 243 KNLVGKNEGAAIYKGILR-----DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWT 317 (508)
Q Consensus 243 ~~~lg~G~~g~V~~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 317 (508)
.+.||.|.||.||+|.+. .+..|+||.++........+.+.+|++.+++++||||++++|++...+..++||||+
T Consensus 4 ~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~~ 83 (259)
T PF07714_consen 4 IKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEYC 83 (259)
T ss_dssp EEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE--
T ss_pred eeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccccccccccccc
Confidence 478999999999999985 257899999977666666889999999999999999999999999888899999999
Q ss_pred CCCCHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-----------
Q 045127 318 NGGNVELWLSE---SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY----------- 383 (508)
Q Consensus 318 ~~gsL~~~l~~---~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~----------- 383 (508)
++|+|.+++.. ..+++..+..|+.||++||+|||++ +++|+||+++||+++.++.+||+|||+..
T Consensus 84 ~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~-~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~~~~ 162 (259)
T PF07714_consen 84 PGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSN-NIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKYKND 162 (259)
T ss_dssp TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHT-TEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSEEES
T ss_pred ccccccccccccccccccccccccccccccccccccccc-cccccccccccccccccccccccccccccccccccccccc
Confidence 99999999984 5899999999999999999999999 99999999999999999999999998642
Q ss_pred ------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcch
Q 045127 384 ------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENM 444 (508)
Q Consensus 384 ------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 444 (508)
.++.++||||||+++||+++ |+.||.+... ..+...+..... ....
T Consensus 163 ~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~--~~~~~~~~~~~~----------~~~~--- 227 (259)
T PF07714_consen 163 SSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDN--EEIIEKLKQGQR----------LPIP--- 227 (259)
T ss_dssp TTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCH--HHHHHHHHTTEE----------TTSB---
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccc--cccccccccccc----------ceec---
Confidence 23568999999999999999 7899865421 111111111110 0000
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHH
Q 045127 445 FDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMI 476 (508)
Q Consensus 445 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L 476 (508)
......+.+++.+||+.||++|||+.++++.|
T Consensus 228 ~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 228 DNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp TTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred cchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 11245577899999999999999999999876
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-36 Score=305.17 Aligned_cols=229 Identities=17% Similarity=0.218 Sum_probs=186.4
Q ss_pred HhhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCC----CHHHHHHHHHHHHHHhhcC-CCCccceeeEEecCC
Q 045127 235 AATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDV----SREIRDEFVEECKLLVQFQ-HKNLIRVLGWNNSRR 308 (508)
Q Consensus 235 ~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~ 308 (508)
...+.|...+.||+|+||+|+.|.. .+++.||+|++.... .....+.+.+|+.++++++ ||||++++.++....
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~ 93 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT 93 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence 4567899999999999999999986 568999999876531 1123556778999999998 999999999999999
Q ss_pred eeEEEEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCC-CceEEeeccCCC---
Q 045127 309 TRAIVTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDN-LEPLISRFKIEY--- 383 (508)
Q Consensus 309 ~~~lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~-~~~kl~Dfg~~~--- 383 (508)
..++||||+.||+|.+++. .+++.+.++..++.|++.|++|+|++ ||+||||||+||+++.+ +++||+|||++.
T Consensus 94 ~~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~-gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~ 172 (370)
T KOG0583|consen 94 KIYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSR-GIVHRDLKPENILLDGNEGNLKLSDFGLSAISP 172 (370)
T ss_pred eEEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhC-CEeeCCCCHHHEEecCCCCCEEEeccccccccC
Confidence 9999999999999999998 58999999999999999999999999 99999999999999999 999999998742
Q ss_pred ------------------------C-C-CCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhc
Q 045127 384 ------------------------Q-H-RSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDER 437 (508)
Q Consensus 384 ------------------------~-~-~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (508)
. | ..++||||+||+||.|++|+.||++.. .....+. +....
T Consensus 173 ~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~-----~~~l~~k--------i~~~~ 239 (370)
T KOG0583|consen 173 GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSN-----VPNLYRK--------IRKGE 239 (370)
T ss_pred CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCcc-----HHHHHHH--------HhcCC
Confidence 1 2 367899999999999999999998621 2222222 11111
Q ss_pred ccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHH
Q 045127 438 MMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAY 480 (508)
Q Consensus 438 l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~ 480 (508)
+..+... . ...+..++.+|+..||.+|+|+.+|+ .-..+.
T Consensus 240 ~~~p~~~-~-S~~~~~Li~~mL~~~P~~R~t~~~i~-~h~w~~ 279 (370)
T KOG0583|consen 240 FKIPSYL-L-SPEARSLIEKMLVPDPSTRITLLEIL-EHPWFQ 279 (370)
T ss_pred ccCCCCc-C-CHHHHHHHHHHcCCCcccCCCHHHHh-hChhhc
Confidence 1111111 0 45667888999999999999999999 433344
|
|
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-36 Score=301.51 Aligned_cols=238 Identities=16% Similarity=0.197 Sum_probs=186.4
Q ss_pred hcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEe
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTE 315 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 315 (508)
-++|+..+.||+|+||.||++... ++..+|+|.+...........+.+|++++++++||||+++++++..++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence 367999999999999999999974 6889999999765555567789999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-----------
Q 045127 316 WTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY----------- 383 (508)
Q Consensus 316 ~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~----------- 383 (508)
|+++|+|.+++. ...+++..+..++.|++.||.|||+..+|+||||||+||+++.++.+||+|||++.
T Consensus 84 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 163 (331)
T cd06649 84 HMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV 163 (331)
T ss_pred cCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCcccccccccccccCC
Confidence 999999999997 56789999999999999999999986369999999999999999999999998642
Q ss_pred --------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccc---------------------
Q 045127 384 --------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPE--------------------- 428 (508)
Q Consensus 384 --------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~--------------------- 428 (508)
.++.++|||||||++|||++|+.||......+ +...+......
T Consensus 164 g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (331)
T cd06649 164 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKE--LEAIFGRPVVDGEEGEPHSISPRPRPPGRPVS 241 (331)
T ss_pred CCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHhcccccccccCCccccCccccccccccc
Confidence 34668999999999999999999996432111 11111000000
Q ss_pred ----------hhhhhhhhcccC---CcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHH
Q 045127 429 ----------NLQLVVDERMML---TENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMI 476 (508)
Q Consensus 429 ----------~~~~~~~~~l~~---~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L 476 (508)
...+..+..... ..........+.+++.+||+.||++|||+.|+++..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~ 302 (331)
T cd06649 242 GHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHT 302 (331)
T ss_pred ccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcCh
Confidence 000000000000 000001245688899999999999999999998763
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-37 Score=327.96 Aligned_cols=231 Identities=22% Similarity=0.297 Sum_probs=195.3
Q ss_pred CCCCCceeeecCCeEEEEEEEC--CCC----EEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEE
Q 045127 239 GFSKKNLVGKNEGAAIYKGILR--DGT----RVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAI 312 (508)
Q Consensus 239 ~~~~~~~lg~G~~g~V~~~~~~--~~~----~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 312 (508)
..+..+.||+|+||.||+|... +|. .||||.+++..+.+...+|.+|..+|++++|||||+++|++.+....+|
T Consensus 693 ~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i 772 (1025)
T KOG1095|consen 693 NVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLI 772 (1025)
T ss_pred heEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEE
Confidence 3455688999999999999974 343 4999999888888889999999999999999999999999999999999
Q ss_pred EEeecCCCCHHHHhcc--------CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC--
Q 045127 313 VTEWTNGGNVELWLSE--------SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE-- 382 (508)
Q Consensus 313 v~e~~~~gsL~~~l~~--------~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~-- 382 (508)
++|||++|+|..++++ ..++..+.+.++.|||+|+.||+++ ++|||||..+|+|+++...+||+|||++
T Consensus 773 ~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~-~fvHRDLAaRNCLL~~~r~VKIaDFGlArD 851 (1025)
T KOG1095|consen 773 LLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK-HFVHRDLAARNCLLDERRVVKIADFGLARD 851 (1025)
T ss_pred EehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC-CCcCcchhhhheeecccCcEEEcccchhHh
Confidence 9999999999999983 3578999999999999999999999 9999999999999999999999999985
Q ss_pred ---------------------------CCCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhh
Q 045127 383 ---------------------------YQHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVV 434 (508)
Q Consensus 383 ---------------------------~~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (508)
+.++.|+|||||||++||++| |..||.+..+.+ +...+..
T Consensus 852 iy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~--v~~~~~~---------- 919 (1025)
T KOG1095|consen 852 IYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFE--VLLDVLE---------- 919 (1025)
T ss_pred hhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHH--HHHHHHh----------
Confidence 346789999999999999999 899998654332 1111110
Q ss_pred hhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhCCC
Q 045127 435 DERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSCPI 485 (508)
Q Consensus 435 ~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~ 485 (508)
..++..+ ..+...+.+++..||+.+|++||++..|++.+..+......
T Consensus 920 ggRL~~P---~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~~~ 967 (1025)
T KOG1095|consen 920 GGRLDPP---SYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAALG 967 (1025)
T ss_pred CCccCCC---CCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhhcc
Confidence 1122222 23467788999999999999999999999999988765443
|
|
| >KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-37 Score=302.88 Aligned_cols=225 Identities=14% Similarity=0.148 Sum_probs=182.7
Q ss_pred HHhhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCC--HHHHHHHHHHHHHHhhc-CCCCccceeeEEecCCe
Q 045127 234 KAATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVS--REIRDEFVEECKLLVQF-QHKNLIRVLGWNNSRRT 309 (508)
Q Consensus 234 ~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 309 (508)
.+...+|.-++.||.|+|++|++|+. ..++.+|||++.+..- +...+...+|-.+|.+| .||.|++++..|.++..
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~s 148 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEES 148 (604)
T ss_pred cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccc
Confidence 45667899999999999999999996 5689999999854321 11234577889999999 79999999999999999
Q ss_pred eEEEEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-----
Q 045127 310 RAIVTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY----- 383 (508)
Q Consensus 310 ~~lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~----- 383 (508)
.|+|+||+++|+|.++++ .+.+++....-++.+|+.||+|||++ |||||||||+|||+|++|++||+|||.+.
T Consensus 149 LYFvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~-GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~ 227 (604)
T KOG0592|consen 149 LYFVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSN-GIIHRDLKPENILLDKDGHIKITDFGSAKILSPS 227 (604)
T ss_pred eEEEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhc-CceeccCChhheeEcCCCcEEEeeccccccCChh
Confidence 999999999999999998 67899999999999999999999999 99999999999999999999999998642
Q ss_pred -----------------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccc
Q 045127 384 -----------------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPE 428 (508)
Q Consensus 384 -----------------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 428 (508)
..++.+|+|+||||+|+|+.|++||.....- ..
T Consensus 228 ~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Ney-li----------- 295 (604)
T KOG0592|consen 228 QKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEY-LI----------- 295 (604)
T ss_pred hccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHH-HH-----------
Confidence 2346789999999999999999999753211 11
Q ss_pred hhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 429 NLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 429 ~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
+..+++-.....+.. ...+.+|+.+.+..||++|+|+++|.+.
T Consensus 296 -FqkI~~l~y~fp~~f---p~~a~dLv~KLLv~dp~~Rlt~~qIk~H 338 (604)
T KOG0592|consen 296 -FQKIQALDYEFPEGF---PEDARDLIKKLLVRDPSDRLTSQQIKAH 338 (604)
T ss_pred -HHHHHHhcccCCCCC---CHHHHHHHHHHHccCccccccHHHHhhC
Confidence 112222222111211 2445567777889999999999999875
|
|
| >KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-37 Score=277.44 Aligned_cols=233 Identities=13% Similarity=0.168 Sum_probs=191.6
Q ss_pred HHhhcCCCCCceeeecCCeEEEEEE-ECCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecC-----
Q 045127 234 KAATNGFSKKNLVGKNEGAAIYKGI-LRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSR----- 307 (508)
Q Consensus 234 ~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~----- 307 (508)
....++|.+.+.||+|||+.||.++ ..++..+|+|++.... .+..+..++|++..++++|||+++++++...+
T Consensus 17 ~In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~-~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~ 95 (302)
T KOG2345|consen 17 IINNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHS-QEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGK 95 (302)
T ss_pred EEcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccc-hHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCc
Confidence 3445789999999999999999998 4678999999996544 45778899999999999999999999987643
Q ss_pred CeeEEEEeecCCCCHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHhhCCC--ccccCCCCCCEEecCCCceEEeecc
Q 045127 308 RTRAIVTEWTNGGNVELWLS-----ESAPSWKHRLKVLIGVVEAMCYLQEQWP--EVDYDLRTGSVLLTDNLEPLISRFK 380 (508)
Q Consensus 308 ~~~~lv~e~~~~gsL~~~l~-----~~~l~~~~~~~i~~~i~~~L~~LH~~~~--iiH~Dlkp~NIll~~~~~~kl~Dfg 380 (508)
...|++++|...|+|.+.++ +..+++.+.+.|+.+|++||++||+. . ++||||||.||++.+++.+++.|||
T Consensus 96 ~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~G 174 (302)
T KOG2345|consen 96 HEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDLG 174 (302)
T ss_pred eeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEecc
Confidence 35899999999999999987 55789999999999999999999999 6 9999999999999999999999998
Q ss_pred CC---------------------------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHH
Q 045127 381 IE---------------------------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEY 421 (508)
Q Consensus 381 ~~---------------------------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~ 421 (508)
.. ...++++|||||||++|+|+.|..||+.....+.++.
T Consensus 175 S~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSla-- 252 (302)
T KOG2345|consen 175 SATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLA-- 252 (302)
T ss_pred CccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEE--
Confidence 73 2346789999999999999999999986443222211
Q ss_pred HHHhccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHH
Q 045127 422 IRMHYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAY 480 (508)
Q Consensus 422 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~ 480 (508)
..+..+.+..+.. ..-.+.+.+++.+|++.||.+||++.+++..++.+.
T Consensus 253 ---------LAv~n~q~s~P~~-~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li 301 (302)
T KOG2345|consen 253 ---------LAVQNAQISIPNS-SRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI 301 (302)
T ss_pred ---------EeeeccccccCCC-CCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence 1122222211111 124677889999999999999999999999988753
|
|
| >KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-37 Score=304.96 Aligned_cols=218 Identities=18% Similarity=0.196 Sum_probs=180.3
Q ss_pred CCceeeecCCeEEEEEEECCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEeecCCCC
Q 045127 242 KKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWTNGGN 321 (508)
Q Consensus 242 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gs 321 (508)
..+-||+|+.|.||.|+++ ++.||||+++.-. ..+++-|++|+||||+.+.|+|.....+|||||||..|-
T Consensus 128 ELeWlGSGaQGAVF~Grl~-netVAVKKV~elk--------ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~Gq 198 (904)
T KOG4721|consen 128 ELEWLGSGAQGAVFLGRLH-NETVAVKKVRELK--------ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQ 198 (904)
T ss_pred hhhhhccCcccceeeeecc-CceehhHHHhhhh--------hhhHHHHHhccCcceeeEeeeecCCceeEEeeecccccc
Confidence 4588999999999999996 7889999885322 357888999999999999999999999999999999999
Q ss_pred HHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC------------------
Q 045127 322 VELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE------------------ 382 (508)
Q Consensus 322 L~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~------------------ 382 (508)
|...++ +..+.....+.|..+||.|+.|||.+ .|||||||.-||||+.+..+||+|||.+
T Consensus 199 L~~VLka~~~itp~llv~Wsk~IA~GM~YLH~h-KIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~STkMSFaGTVaW 277 (904)
T KOG4721|consen 199 LYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLH-KIIHRDLKSPNILISYDDVVKISDFGTSKELSDKSTKMSFAGTVAW 277 (904)
T ss_pred HHHHHhccCccCHHHHHHHHHHhhhhhHHHHHh-hHhhhccCCCceEeeccceEEeccccchHhhhhhhhhhhhhhhHhh
Confidence 999999 77889999999999999999999999 9999999999999999999999999874
Q ss_pred --------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHHHHHHHH
Q 045127 383 --------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQAEQGLGL 454 (508)
Q Consensus 383 --------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l 454 (508)
...++|+|||||||+||||+||..||.+...... ++..-.. .+ .......+.+.+.-+
T Consensus 278 MAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAI-----IwGVGsN--------sL-~LpvPstcP~GfklL 343 (904)
T KOG4721|consen 278 MAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAI-----IWGVGSN--------SL-HLPVPSTCPDGFKLL 343 (904)
T ss_pred hCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchhee-----EEeccCC--------cc-cccCcccCchHHHHH
Confidence 3457899999999999999999999986543221 1111000 01 001112345566678
Q ss_pred HHhcCCCCCCCCCCHHHHHHHHHHHHhhC
Q 045127 455 GLMCTDQPTGKLPSLVQIYNMITRAYKSC 483 (508)
Q Consensus 455 ~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 483 (508)
+.+||+..|..||++.+|+..|+-..+..
T Consensus 344 ~Kqcw~sKpRNRPSFrqil~HldIa~pel 372 (904)
T KOG4721|consen 344 LKQCWNSKPRNRPSFRQILLHLDIASPEL 372 (904)
T ss_pred HHHHHhcCCCCCccHHHHHHHHhhcCHHH
Confidence 88999999999999999999987554443
|
|
| >KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-37 Score=277.68 Aligned_cols=235 Identities=17% Similarity=0.195 Sum_probs=184.8
Q ss_pred cCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCH-HHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEe
Q 045127 238 NGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSR-EIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTE 315 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 315 (508)
.+|...+++|+|.||.||+|+. .+|+.||||+++..... .......+|++.|+.++|+||+.++++|...+...+|+|
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE 81 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE 81 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence 4688889999999999999996 67999999999754333 234567899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC-----------
Q 045127 316 WTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE----------- 382 (508)
Q Consensus 316 ~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~----------- 382 (508)
||+. +|+..++ ...++..++..++.++++|++|+|++ .|+||||||.|+||+.+|.+||+|||++
T Consensus 82 fm~t-dLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~-~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~~ 159 (318)
T KOG0659|consen 82 FMPT-DLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSK-WILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQT 159 (318)
T ss_pred eccc-cHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhh-hhhcccCCccceEEcCCCcEEeecccchhccCCCCcccc
Confidence 9975 9999998 56789999999999999999999999 9999999999999999999999999984
Q ss_pred -----------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHH-------hccch--hhhhhhh
Q 045127 383 -----------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRM-------HYPEN--LQLVVDE 436 (508)
Q Consensus 383 -----------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~-------~~~~~--~~~~~~~ 436 (508)
+.|+...||||.|||+.||+-|.+-|.+.++ -.++...++. .+++- +.+.++-
T Consensus 160 ~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sD-idQL~~If~~LGTP~~~~WP~~~~lpdY~~~ 238 (318)
T KOG0659|consen 160 HQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSD-IDQLSKIFRALGTPTPDQWPEMTSLPDYVKI 238 (318)
T ss_pred cceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCch-HHHHHHHHHHcCCCCcccCccccccccHHHH
Confidence 3566778999999999999999877764332 1122222211 11110 1111111
Q ss_pred c----ccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 437 R----MMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 437 ~----l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
. .....-........++++..++..||.+|+|++|++++
T Consensus 239 ~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 239 QQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred hcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 1 00110112335566899999999999999999999875
|
|
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-36 Score=299.10 Aligned_cols=229 Identities=17% Similarity=0.242 Sum_probs=184.7
Q ss_pred cCCCCCceeeecCCeEEEEEEEC-CCC----EEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEE
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILR-DGT----RVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAI 312 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 312 (508)
.+|+..+.||+|+||.||+|.+. +++ .||+|.++........+++.+|+.+++.++||||++++|++... ..++
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~ 85 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL 85 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Ccee
Confidence 46899999999999999999863 343 48999997655555677899999999999999999999998764 5679
Q ss_pred EEeecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-------
Q 045127 313 VTEWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------- 383 (508)
Q Consensus 313 v~e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------- 383 (508)
++||+++|+|.+++. ...+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||.+.
T Consensus 86 v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~-~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 164 (316)
T cd05108 86 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEER-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEK 164 (316)
T ss_pred eeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhc-CeeccccchhheEecCCCcEEEccccccccccCCCc
Confidence 999999999999997 34688999999999999999999999 99999999999999999999999998752
Q ss_pred ----------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhcccC
Q 045127 384 ----------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMML 440 (508)
Q Consensus 384 ----------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 440 (508)
.++.++|||||||++|||++ |+.||+..... .+........ ....
T Consensus 165 ~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~--~~~~~~~~~~----------~~~~ 232 (316)
T cd05108 165 EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--EISSILEKGE----------RLPQ 232 (316)
T ss_pred ceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHhCCC----------CCCC
Confidence 23457899999999999998 99998743211 1111111100 0000
Q ss_pred CcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhC
Q 045127 441 TENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSC 483 (508)
Q Consensus 441 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 483 (508)
. ......+.+++.+||+.+|++|||+.+++..+.++....
T Consensus 233 ~---~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~ 272 (316)
T cd05108 233 P---PICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 272 (316)
T ss_pred C---CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcCC
Confidence 0 112345778999999999999999999999999887654
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-36 Score=290.14 Aligned_cols=227 Identities=24% Similarity=0.376 Sum_probs=187.1
Q ss_pred hcCCCCCceeeecCCeEEEEEEECC----CCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEE
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGILRD----GTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAI 312 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 312 (508)
.++|+..+.||+|+||.||+|.+.. ...||+|.++..........+.+|+.++++++||||+++++++...+..++
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~i 82 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMI 82 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEE
Confidence 3578899999999999999999742 458999998766556567789999999999999999999999999999999
Q ss_pred EEeecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-------
Q 045127 313 VTEWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------- 383 (508)
Q Consensus 313 v~e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------- 383 (508)
+|||+++++|.+++. ...+++..+.+++.|++.||+|||++ +|+||||||+||++++++.++++|||.+.
T Consensus 83 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~-~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~ 161 (266)
T cd05033 83 ITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEM-NYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEA 161 (266)
T ss_pred EEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCcceEEEcCCCCEEECccchhhccccccc
Confidence 999999999999987 35789999999999999999999999 99999999999999999999999998632
Q ss_pred ----------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhcccC
Q 045127 384 ----------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMML 440 (508)
Q Consensus 384 ----------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 440 (508)
.++.++||||||+++|||++ |..||...... .+...+...... + .
T Consensus 162 ~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~--~~~~~~~~~~~~-------~---~ 229 (266)
T cd05033 162 TYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQ--DVIKAVEDGYRL-------P---P 229 (266)
T ss_pred ceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHH--HHHHHHHcCCCC-------C---C
Confidence 23457899999999999998 99998643321 111111111100 0 0
Q ss_pred CcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHH
Q 045127 441 TENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRA 479 (508)
Q Consensus 441 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i 479 (508)
.......+.+++.+||+.+|++||++.||++.|+++
T Consensus 230 ---~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 230 ---PMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred ---CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 012245678999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-37 Score=291.10 Aligned_cols=223 Identities=16% Similarity=0.183 Sum_probs=182.4
Q ss_pred hhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCH--HHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEE
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSR--EIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAI 312 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 312 (508)
..++|+..+.||+|+||+||.++. .+++.+|+|++++.... ...+...+|..+|.+++||.||+++-.|.+++..|+
T Consensus 23 ~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLyl 102 (357)
T KOG0598|consen 23 GPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYL 102 (357)
T ss_pred ChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEE
Confidence 356899999999999999999996 45899999999754322 346778999999999999999999999999999999
Q ss_pred EEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC---------
Q 045127 313 VTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE--------- 382 (508)
Q Consensus 313 v~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~--------- 382 (508)
|+||+.||.|...++ ++.+++..+.-++..|+.||.|||++ |||||||||+|||+|++|.++|+|||++
T Consensus 103 Vld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~-gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~~~ 181 (357)
T KOG0598|consen 103 VLDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSK-GIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDGDA 181 (357)
T ss_pred EEeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhC-CeeeccCCHHHeeecCCCcEEEeccccchhcccCCCc
Confidence 999999999999998 88899999999999999999999999 9999999999999999999999999884
Q ss_pred ------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcch
Q 045127 383 ------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENM 444 (508)
Q Consensus 383 ------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 444 (508)
..++..+|.||+|+++|||++|.+||.... ..++........ +...+.
T Consensus 182 t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~-----~~~~~~~I~~~k--------~~~~p~- 247 (357)
T KOG0598|consen 182 TRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAED-----VKKMYDKILKGK--------LPLPPG- 247 (357)
T ss_pred cccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCcc-----HHHHHHHHhcCc--------CCCCCc-
Confidence 356788999999999999999999998532 223333322221 111110
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCC----CHHHHHH
Q 045127 445 FDQAEQGLGLGLMCTDQPTGKLP----SLVQIYN 474 (508)
Q Consensus 445 ~~~~~~l~~l~~~Cl~~dP~~RP----s~~evl~ 474 (508)
-...+..+++...+..||++|- ++.+|.+
T Consensus 248 -~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~ 280 (357)
T KOG0598|consen 248 -YLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKR 280 (357)
T ss_pred -cCCHHHHHHHHHHhccCHHHhcCCCCChHHhhc
Confidence 0123455667777899999994 5666544
|
|
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-36 Score=299.81 Aligned_cols=236 Identities=14% Similarity=0.199 Sum_probs=179.2
Q ss_pred hcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEe
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTE 315 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 315 (508)
.++|+..+.||+|+||.||+|... +++.||+|++...........+.+|+.+++.++||||+++++++..+...++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE 83 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence 468999999999999999999974 6899999999644333334567889999999999999999999999999999999
Q ss_pred ecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC----------
Q 045127 316 WTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY---------- 383 (508)
Q Consensus 316 ~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~---------- 383 (508)
|++ ++|.+++. ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||.+.
T Consensus 84 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 161 (303)
T cd07869 84 YVH-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQR-YILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHTYS 161 (303)
T ss_pred CCC-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEECCCCCEEECCCCcceeccCCCccCC
Confidence 996 57877776 45689999999999999999999999 99999999999999999999999998631
Q ss_pred ------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccc--h-h---hh--hhhh-
Q 045127 384 ------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPE--N-L---QL--VVDE- 436 (508)
Q Consensus 384 ------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~--~-~---~~--~~~~- 436 (508)
.++.++||||+||++|||++|+.||.........+.......... . . .. ..++
T Consensus 162 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (303)
T cd07869 162 NEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPE 241 (303)
T ss_pred CCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccccc
Confidence 234568999999999999999999975432211111111100000 0 0 00 0000
Q ss_pred ccc--CCcchH------HHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 437 RMM--LTENMF------DQAEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 437 ~l~--~~~~~~------~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
... ...... .....+.+++.+|++.||++|||+.|+++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~ 287 (303)
T cd07869 242 RFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS 287 (303)
T ss_pred cccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence 000 000000 01245678999999999999999999986
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-36 Score=288.09 Aligned_cols=221 Identities=19% Similarity=0.303 Sum_probs=181.1
Q ss_pred cCCCCCceeeecCCeEEEEEEECCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEeec
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWT 317 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 317 (508)
++|+..+.||+|+||.||+|.+.++..+|+|.+..... ....+.+|+.++++++||||+++++++......++||||+
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~ 81 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAM--SEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFM 81 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCCc--cHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcC
Confidence 45778899999999999999998888999999864322 2467889999999999999999999999999999999999
Q ss_pred CCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC------------
Q 045127 318 NGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------------ 383 (508)
Q Consensus 318 ~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------------ 383 (508)
++|+|.+++. ...+++..+..++.|++.||+|||++ +++||||||+||+++.++.+|++|||.+.
T Consensus 82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~~~ 160 (256)
T cd05114 82 ENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERN-SFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSSG 160 (256)
T ss_pred CCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC-CccccccCcceEEEcCCCeEEECCCCCccccCCCceeccCC
Confidence 9999999986 34689999999999999999999999 99999999999999999999999998542
Q ss_pred ----------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHH
Q 045127 384 ----------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFD 446 (508)
Q Consensus 384 ----------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 446 (508)
.++.++||||||+++|||++ |+.||..... ......+..... ...+ ..
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~--~~~~~~i~~~~~-----~~~~--------~~ 225 (256)
T cd05114 161 AKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSN--YEVVEMISRGFR-----LYRP--------KL 225 (256)
T ss_pred CCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHHHCCCC-----CCCC--------CC
Confidence 23467999999999999999 8999864321 111122211100 0001 01
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCHHHHHHHH
Q 045127 447 QAEQGLGLGLMCTDQPTGKLPSLVQIYNMI 476 (508)
Q Consensus 447 ~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L 476 (508)
....+.+++.+||+.+|++|||++|+++.|
T Consensus 226 ~~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 226 ASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred CCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 234678899999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-36 Score=293.31 Aligned_cols=225 Identities=22% Similarity=0.368 Sum_probs=185.0
Q ss_pred cCCCCCceeeecCCeEEEEEEECC------CCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeE
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILRD------GTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRA 311 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~~------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 311 (508)
++|+..+.||+|+||.||+|.... ...||+|.+...........+.+|+..+++++||||+++++++......+
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC 84 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence 467888999999999999998632 25799999976655556778999999999999999999999999888899
Q ss_pred EEEeecCCCCHHHHhcc-----------------CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCce
Q 045127 312 IVTEWTNGGNVELWLSE-----------------SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEP 374 (508)
Q Consensus 312 lv~e~~~~gsL~~~l~~-----------------~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~ 374 (508)
++|||+++|+|.+++.. ..+++.++..++.|++.||+|||+. +++||||||+||++++++.+
T Consensus 85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~-~i~H~dlkp~Nil~~~~~~~ 163 (283)
T cd05048 85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH-HFVHRDLAARNCLVGEGLTV 163 (283)
T ss_pred EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC-CeeccccccceEEEcCCCcE
Confidence 99999999999999862 4578899999999999999999999 99999999999999999999
Q ss_pred EEeeccCCC-----------------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHH
Q 045127 375 LISRFKIEY-----------------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRM 424 (508)
Q Consensus 375 kl~Dfg~~~-----------------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~ 424 (508)
+|+|||.+. .++.++|||||||++|||++ |..||...... .+...+..
T Consensus 164 ~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~--~~~~~i~~ 241 (283)
T cd05048 164 KISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQ--EVIEMIRS 241 (283)
T ss_pred EECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHHc
Confidence 999998642 23567899999999999998 99998753321 11111111
Q ss_pred hccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHH
Q 045127 425 HYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITR 478 (508)
Q Consensus 425 ~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 478 (508)
. .... .......++.+++.+||+.||++||+++||++.|+.
T Consensus 242 ~-----------~~~~--~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 242 R-----------QLLP--CPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred C-----------CcCC--CcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 1 0000 011235678889999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-35 Score=287.05 Aligned_cols=230 Identities=15% Similarity=0.190 Sum_probs=186.1
Q ss_pred cCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecC--CCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEE
Q 045127 238 NGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKG--DVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVT 314 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~--~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 314 (508)
++|+..+.||+|+||.||+|+. .+++.||||.+.. .........+.+|+++++.++||||+++++++...+..+++|
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 5789999999999999999997 4789999998753 223345667899999999999999999999999989999999
Q ss_pred eecCCCCHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC------
Q 045127 315 EWTNGGNVELWLS-----ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------ 383 (508)
Q Consensus 315 e~~~~gsL~~~l~-----~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------ 383 (508)
||+++|+|.+++. ...+++..+..++.|++.||+|||++ +++|+||||+||+++.++.++++|||.+.
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~-~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~ 160 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSR-RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT 160 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhC-CeeCCCCCHHHEEEcCCCCEEECccccceeccchh
Confidence 9999999998885 34578999999999999999999999 99999999999999999999999998531
Q ss_pred ---------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCc
Q 045127 384 ---------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTE 442 (508)
Q Consensus 384 ---------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 442 (508)
..+.++||||||+++|||++|+.||.........+...+... ..+..
T Consensus 161 ~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~--------~~~~~---- 228 (267)
T cd08228 161 TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQC--------DYPPL---- 228 (267)
T ss_pred HHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcC--------CCCCC----
Confidence 235578999999999999999999864322211111111110 00100
Q ss_pred chHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHH
Q 045127 443 NMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAY 480 (508)
Q Consensus 443 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~ 480 (508)
........+.+++.+||+.+|++||++.||++.+++++
T Consensus 229 ~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 229 PTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred ChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 01123456788999999999999999999999998864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-36 Score=293.19 Aligned_cols=233 Identities=15% Similarity=0.160 Sum_probs=179.0
Q ss_pred cCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEee
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEW 316 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 316 (508)
++|+..+.||+|+||.||+|... +++.||+|.++..........+.+|+.++++++||||+++++++..++..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY 84 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence 56889999999999999999974 68999999986543333445678999999999999999999999999999999999
Q ss_pred cCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-----------
Q 045127 317 TNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY----------- 383 (508)
Q Consensus 317 ~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~----------- 383 (508)
+++ +|.+++. ...+++..+..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||++.
T Consensus 85 ~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~~~~~ 162 (288)
T cd07871 85 LDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKR-KILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKTYSN 162 (288)
T ss_pred CCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHEEECCCCCEEECcCcceeeccCCCccccC
Confidence 975 8998886 44578999999999999999999999 99999999999999999999999998631
Q ss_pred -----------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccc---h-h---------hhh
Q 045127 384 -----------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPE---N-L---------QLV 433 (508)
Q Consensus 384 -----------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~---~-~---------~~~ 433 (508)
.++.++||||+||++|||++|+.||......+ .+.. +...... . . ...
T Consensus 163 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (288)
T cd07871 163 EVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKE-ELHL-IFRLLGTPTEETWPGITSNEEFRSY 240 (288)
T ss_pred ceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHH-HHHHhCCCChHHhhccccchhhhcc
Confidence 24567999999999999999999997533211 1111 1111100 0 0 111
Q ss_pred hhhcccCCcc---hHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 434 VDERMMLTEN---MFDQAEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 434 ~~~~l~~~~~---~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
..+....... .........+++.+|++.||.+|||++|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~ 284 (288)
T cd07871 241 LFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR 284 (288)
T ss_pred ccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 1111000000 0011345678999999999999999999975
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-36 Score=289.54 Aligned_cols=228 Identities=21% Similarity=0.331 Sum_probs=187.8
Q ss_pred HhhcCCCCCceeeecCCeEEEEEEECCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEE
Q 045127 235 AATNGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVT 314 (508)
Q Consensus 235 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 314 (508)
+...+|+..+.||.|+||.||+|...++..+++|.+..... .....+.+|+.+++.++||||+++++++......++||
T Consensus 3 ~~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 81 (261)
T cd05148 3 RPREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDL-LKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIIT 81 (261)
T ss_pred CcHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccch-hhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEE
Confidence 44567889999999999999999998899999999865433 24567899999999999999999999999999999999
Q ss_pred eecCCCCHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC--------
Q 045127 315 EWTNGGNVELWLS---ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY-------- 383 (508)
Q Consensus 315 e~~~~gsL~~~l~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~-------- 383 (508)
||+++++|.+++. ...+++..+..++.|++.||+|||+. |++||||||+||++++++.+||+|||.+.
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~-~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~ 160 (261)
T cd05148 82 ELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQ-NSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYL 160 (261)
T ss_pred eecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccccCcceEEEcCCceEEEccccchhhcCCcccc
Confidence 9999999999997 34689999999999999999999999 99999999999999999999999998642
Q ss_pred -------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcc
Q 045127 384 -------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTEN 443 (508)
Q Consensus 384 -------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 443 (508)
.++.++||||||+++|+|++ |+.||...... .....+..... ...
T Consensus 161 ~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~--~~~~~~~~~~~----------~~~--- 225 (261)
T cd05148 161 SSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNH--EVYDQITAGYR----------MPC--- 225 (261)
T ss_pred ccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHH--HHHHHHHhCCc----------CCC---
Confidence 34567899999999999998 89999643311 11111111110 000
Q ss_pred hHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHH
Q 045127 444 MFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRA 479 (508)
Q Consensus 444 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i 479 (508)
.......+.+++.+||+.||.+|||+.++++.|+.+
T Consensus 226 ~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 226 PAKCPQEIYKIMLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence 012245677899999999999999999999999853
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-36 Score=305.70 Aligned_cols=231 Identities=18% Similarity=0.292 Sum_probs=186.2
Q ss_pred hhcCCCCCceeeecCCeEEEEEEECC------CCEEEEEEecCCCCHHHHHHHHHHHHHHhhcC-CCCccceeeEEecCC
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGILRD------GTRVKIEIYKGDVSREIRDEFVEECKLLVQFQ-HKNLIRVLGWNNSRR 308 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~~~------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~ 308 (508)
..++|...++||+|+||.||+|.+.. +..||||+++........+.+.+|+++++++. ||||+++++++....
T Consensus 35 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~ 114 (400)
T cd05105 35 PRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSG 114 (400)
T ss_pred cccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCC
Confidence 35678899999999999999998621 34699999976655556678999999999996 999999999999999
Q ss_pred eeEEEEeecCCCCHHHHhcc------------------------------------------------------------
Q 045127 309 TRAIVTEWTNGGNVELWLSE------------------------------------------------------------ 328 (508)
Q Consensus 309 ~~~lv~e~~~~gsL~~~l~~------------------------------------------------------------ 328 (508)
..++||||+++|+|.+++..
T Consensus 115 ~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (400)
T cd05105 115 PIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEI 194 (400)
T ss_pred ceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhh
Confidence 99999999999999988752
Q ss_pred -------------------------------------CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCC
Q 045127 329 -------------------------------------SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDN 371 (508)
Q Consensus 329 -------------------------------------~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~ 371 (508)
..+++..+..++.|+++||+|||+. +++||||||+||+++.+
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~-~ivH~dikp~Nill~~~ 273 (400)
T cd05105 195 KEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK-NCVHRDLAARNVLLAQG 273 (400)
T ss_pred hhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCChHhEEEeCC
Confidence 2367888899999999999999999 99999999999999999
Q ss_pred CceEEeeccCCC-----------------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHH
Q 045127 372 LEPLISRFKIEY-----------------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEY 421 (508)
Q Consensus 372 ~~~kl~Dfg~~~-----------------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~ 421 (508)
+.+||+|||++. .++.++|||||||++|||++ |..||.....+.. +...
T Consensus 274 ~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~-~~~~ 352 (400)
T cd05105 274 KIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDST-FYNK 352 (400)
T ss_pred CEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHH-HHHH
Confidence 999999998642 23567999999999999997 9999875432211 1111
Q ss_pred HHHhccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHh
Q 045127 422 IRMHYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYK 481 (508)
Q Consensus 422 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~ 481 (508)
+.... .... .......+.+++.+||+.||++|||+.+|.+.|+++.+
T Consensus 353 ~~~~~----------~~~~---~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~ 399 (400)
T cd05105 353 IKSGY----------RMAK---PDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP 399 (400)
T ss_pred HhcCC----------CCCC---CccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence 11100 0000 01224567889999999999999999999999998754
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-36 Score=296.19 Aligned_cols=221 Identities=16% Similarity=0.152 Sum_probs=180.0
Q ss_pred cCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCC--CHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEE
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDV--SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVT 314 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 314 (508)
++|+..+.||+|+||.||+|... +++.||+|++.... .....+.+.+|+.++++++||||+++++++.+....++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 46888999999999999999974 68999999986432 1234567889999999999999999999999999999999
Q ss_pred eecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC----------
Q 045127 315 EWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY---------- 383 (508)
Q Consensus 315 e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~---------- 383 (508)
||+++|+|.+++. ...+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++.
T Consensus 81 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~ 159 (291)
T cd05612 81 EYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSK-EIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRTWTLC 159 (291)
T ss_pred eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCCHHHeEECCCCCEEEEecCcchhccCCccccc
Confidence 9999999999987 56789999999999999999999999 99999999999999999999999998742
Q ss_pred --------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHHH
Q 045127 384 --------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQAE 449 (508)
Q Consensus 384 --------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 449 (508)
.++.++|||||||++|||++|+.||...... .+...+ ......... ....
T Consensus 160 gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~--~~~~~i-----------~~~~~~~~~---~~~~ 223 (291)
T cd05612 160 GTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPF--GIYEKI-----------LAGKLEFPR---HLDL 223 (291)
T ss_pred CChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHH-----------HhCCcCCCc---cCCH
Confidence 2456789999999999999999999743211 111111 111110000 1134
Q ss_pred HHHHHHHhcCCCCCCCCCC-----HHHHHHH
Q 045127 450 QGLGLGLMCTDQPTGKLPS-----LVQIYNM 475 (508)
Q Consensus 450 ~l~~l~~~Cl~~dP~~RPs-----~~evl~~ 475 (508)
.+.+++.+|++.||.+||+ ++|+++.
T Consensus 224 ~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 254 (291)
T cd05612 224 YAKDLIKKLLVVDRTRRLGNMKNGADDVKNH 254 (291)
T ss_pred HHHHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence 5678999999999999995 8888865
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-36 Score=286.76 Aligned_cols=218 Identities=21% Similarity=0.344 Sum_probs=178.9
Q ss_pred ceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEeecCCCCH
Q 045127 244 NLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWTNGGNV 322 (508)
Q Consensus 244 ~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 322 (508)
+.||+|+||.||+|.. .+++.||+|.+......+....+.+|++++++++||||+++++++......++||||+++++|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 80 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence 4689999999999997 478999999987655555677899999999999999999999999999999999999999999
Q ss_pred HHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-----------------
Q 045127 323 ELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY----------------- 383 (508)
Q Consensus 323 ~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~----------------- 383 (508)
.+++. ...+++..+..++.|++.||+|||++ |++||||||+||+++.++.+|++|||.+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~-~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~ 159 (252)
T cd05084 81 LTFLRTEGPRLKVKELIQMVENAAAGMEYLESK-HCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQIP 159 (252)
T ss_pred HHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC-CccccccchheEEEcCCCcEEECccccCcccccccccccCCCCCCc
Confidence 99986 34689999999999999999999999 99999999999999999999999998642
Q ss_pred ------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHHHH
Q 045127 384 ------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQAEQ 450 (508)
Q Consensus 384 ------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 450 (508)
.++.++||||||+++|||++ |..||....... .........+ .... ......
T Consensus 160 ~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~--~~~~~~~~~~----------~~~~---~~~~~~ 224 (252)
T cd05084 160 VKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQ--TREAIEQGVR----------LPCP---ELCPDA 224 (252)
T ss_pred eeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHH--HHHHHHcCCC----------CCCc---ccCCHH
Confidence 12446899999999999998 888886432111 1111111000 0000 112456
Q ss_pred HHHHHHhcCCCCCCCCCCHHHHHHHHH
Q 045127 451 GLGLGLMCTDQPTGKLPSLVQIYNMIT 477 (508)
Q Consensus 451 l~~l~~~Cl~~dP~~RPs~~evl~~L~ 477 (508)
+.+++.+|++.+|++|||+.++.++|+
T Consensus 225 ~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 225 VYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 788999999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=293.25 Aligned_cols=232 Identities=21% Similarity=0.308 Sum_probs=186.9
Q ss_pred cCCCCCceeeecCCeEEEEEEEC-CCC--EEEEEEecCCCCHHHHHHHHHHHHHHhhc-CCCCccceeeEEecCCeeEEE
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILR-DGT--RVKIEIYKGDVSREIRDEFVEECKLLVQF-QHKNLIRVLGWNNSRRTRAIV 313 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~-~~~--~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv 313 (508)
++|+..+.||+|+||.||+|... ++. .+++|.++........+.+.+|+.++.++ +||||+++++++......+++
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 81 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA 81 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence 57888999999999999999874 333 47888886544445567899999999999 799999999999988899999
Q ss_pred EeecCCCCHHHHhcc-----------------CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEE
Q 045127 314 TEWTNGGNVELWLSE-----------------SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLI 376 (508)
Q Consensus 314 ~e~~~~gsL~~~l~~-----------------~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl 376 (508)
|||+++++|.+++.. ..+++..+..++.|++.||+|||++ |++||||||+||++++++.+||
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~-~ivH~dlkp~Nill~~~~~~kl 160 (297)
T cd05089 82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK-QFIHRDLAARNVLVGENLASKI 160 (297)
T ss_pred EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCcCCcceEEECCCCeEEE
Confidence 999999999999862 2478899999999999999999999 9999999999999999999999
Q ss_pred eeccCCC--------------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccch
Q 045127 377 SRFKIEY--------------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPEN 429 (508)
Q Consensus 377 ~Dfg~~~--------------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~ 429 (508)
+|||++. .++.++|||||||++|||++ |..||...... ....... ..
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~-----~~~~~~~-~~ 234 (297)
T cd05089 161 ADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCA-----ELYEKLP-QG 234 (297)
T ss_pred CCcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH-----HHHHHHh-cC
Confidence 9998641 23568999999999999997 99999643211 1111110 00
Q ss_pred hhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhCCC
Q 045127 430 LQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSCPI 485 (508)
Q Consensus 430 ~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~ 485 (508)
..... . ......+.+++.+||+.+|.+|||++++++.|+.+......
T Consensus 235 ----~~~~~--~---~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~~~ 281 (297)
T cd05089 235 ----YRMEK--P---RNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEARKA 281 (297)
T ss_pred ----CCCCC--C---CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhcc
Confidence 00000 0 11234677899999999999999999999999999876643
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-35 Score=296.61 Aligned_cols=175 Identities=20% Similarity=0.322 Sum_probs=156.9
Q ss_pred hcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEe
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTE 315 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 315 (508)
.++|+..+.||+|+||.||+|... ++..+|+|.+...........+.+|++++++++||||+++++++..++..++|||
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence 368999999999999999999974 6889999998765555566789999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-----------
Q 045127 316 WTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY----------- 383 (508)
Q Consensus 316 ~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~----------- 383 (508)
|+++|+|.+++. ...+++..+..++.|++.||.|||+..+++||||||+||+++.++.+||+|||++.
T Consensus 84 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~ 163 (333)
T cd06650 84 HMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV 163 (333)
T ss_pred cCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhccccCC
Confidence 999999999987 55689999999999999999999975379999999999999999999999998642
Q ss_pred --------------CCCCcchhhHHHHHHHHHHhCCCCCccc
Q 045127 384 --------------QHRSTKYVYKFGLFLLEMITNRRPLEEF 411 (508)
Q Consensus 384 --------------~~~~~~Dv~SlGvil~elltg~~P~~~~ 411 (508)
.++.++|||||||++|||++|+.||...
T Consensus 164 ~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~ 205 (333)
T cd06650 164 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPP 205 (333)
T ss_pred CCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc
Confidence 2456799999999999999999999743
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-36 Score=292.54 Aligned_cols=224 Identities=13% Similarity=0.131 Sum_probs=177.8
Q ss_pred CCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCC--HHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEe
Q 045127 239 GFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVS--REIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTE 315 (508)
Q Consensus 239 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 315 (508)
.|+..+.||+|+||.||+|.. .+++.||+|.+..... ......+.+|+.++++++|++|+++++++.+.+..++|||
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence 367789999999999999996 5789999999864322 2234567899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC---------
Q 045127 316 WTNGGNVELWLS---ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY--------- 383 (508)
Q Consensus 316 ~~~~gsL~~~l~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~--------- 383 (508)
|+++|+|.+++. ...+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||++.
T Consensus 81 ~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 159 (285)
T cd05631 81 IMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRE-RIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGETVR 159 (285)
T ss_pred ecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhC-CEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCCeec
Confidence 999999988875 34689999999999999999999999 99999999999999999999999998742
Q ss_pred -----------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHH
Q 045127 384 -----------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFD 446 (508)
Q Consensus 384 -----------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 446 (508)
.++.++|||||||++|||++|+.||....... ....+..... ....... ..
T Consensus 160 ~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~--~~~~~~~~~~-------~~~~~~~---~~ 227 (285)
T cd05631 160 GRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERV--KREEVDRRVK-------EDQEEYS---EK 227 (285)
T ss_pred CCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcch--hHHHHHHHhh-------cccccCC---cc
Confidence 34567899999999999999999997533211 0111111100 0000000 11
Q ss_pred HHHHHHHHHHhcCCCCCCCCCC-----HHHHHHH
Q 045127 447 QAEQGLGLGLMCTDQPTGKLPS-----LVQIYNM 475 (508)
Q Consensus 447 ~~~~l~~l~~~Cl~~dP~~RPs-----~~evl~~ 475 (508)
....+.+++.+||+.||.+||+ ++++++.
T Consensus 228 ~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h 261 (285)
T cd05631 228 FSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQH 261 (285)
T ss_pred CCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcC
Confidence 2345678899999999999997 7888864
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-35 Score=293.16 Aligned_cols=234 Identities=21% Similarity=0.326 Sum_probs=187.8
Q ss_pred hcCCCCCceeeecCCeEEEEEEEC-CCC--EEEEEEecCCCCHHHHHHHHHHHHHHhhc-CCCCccceeeEEecCCeeEE
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGILR-DGT--RVKIEIYKGDVSREIRDEFVEECKLLVQF-QHKNLIRVLGWNNSRRTRAI 312 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~--~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~l 312 (508)
.++|+..+.||+|+||.||+|.+. ++. .+++|.+...........+.+|++++.++ +||||+++++++..++..++
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~l 85 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 85 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceE
Confidence 357888899999999999999974 454 46788876555555677889999999999 89999999999999999999
Q ss_pred EEeecCCCCHHHHhcc-----------------CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceE
Q 045127 313 VTEWTNGGNVELWLSE-----------------SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPL 375 (508)
Q Consensus 313 v~e~~~~gsL~~~l~~-----------------~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~k 375 (508)
||||+++|+|.+++.. ..+++.++..++.|++.|++|||++ |++||||||+||+++.++.+|
T Consensus 86 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~-gi~H~dlkp~Nili~~~~~~k 164 (303)
T cd05088 86 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK-QFIHRDLAARNILVGENYVAK 164 (303)
T ss_pred EEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC-CccccccchheEEecCCCcEE
Confidence 9999999999999862 2478999999999999999999999 999999999999999999999
Q ss_pred EeeccCCC--------------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccc
Q 045127 376 ISRFKIEY--------------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPE 428 (508)
Q Consensus 376 l~Dfg~~~--------------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~ 428 (508)
|+|||++. .++.++|||||||++|||+| |..||...... ..........
T Consensus 165 l~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~~~~~~~~-- 240 (303)
T cd05088 165 IADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA--ELYEKLPQGY-- 240 (303)
T ss_pred eCccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChH--HHHHHHhcCC--
Confidence 99998752 23568999999999999998 99998643221 1111111000
Q ss_pred hhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhCCCC
Q 045127 429 NLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSCPIL 486 (508)
Q Consensus 429 ~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~ 486 (508)
..... ......+.+++.+||+.+|++||+++++++.|.++.+...+.
T Consensus 241 --------~~~~~---~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~~~~~ 287 (303)
T cd05088 241 --------RLEKP---LNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKTY 287 (303)
T ss_pred --------cCCCC---CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhhhh
Confidence 00000 012345778999999999999999999999999987765543
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-35 Score=290.86 Aligned_cols=228 Identities=21% Similarity=0.301 Sum_probs=185.2
Q ss_pred CCCCCceeeecCCeEEEEEEEC------CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEE
Q 045127 239 GFSKKNLVGKNEGAAIYKGILR------DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAI 312 (508)
Q Consensus 239 ~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 312 (508)
+|+..+.||+|+||.||+|... ....+++|.+...........+.+|+.+++.++||||+++++.+...+..++
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 80 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL 80 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence 4778899999999999999862 2357899998766555566789999999999999999999999999899999
Q ss_pred EEeecCCCCHHHHhcc-------------------------CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEE
Q 045127 313 VTEWTNGGNVELWLSE-------------------------SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVL 367 (508)
Q Consensus 313 v~e~~~~gsL~~~l~~-------------------------~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIl 367 (508)
+|||+++|+|.+++.. ..+++..+..++.|++.||+|||+. +++||||||+||+
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~ivH~dikp~nil 159 (290)
T cd05045 81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM-KLVHRDLAARNVL 159 (290)
T ss_pred EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC-CeehhhhhhheEE
Confidence 9999999999998752 2478899999999999999999999 9999999999999
Q ss_pred ecCCCceEEeeccCCC-----------------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCccc
Q 045127 368 LTDNLEPLISRFKIEY-----------------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAG 417 (508)
Q Consensus 368 l~~~~~~kl~Dfg~~~-----------------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~ 417 (508)
+++++.+||+|||++. .++.++||||||+++|||++ |+.||...... .
T Consensus 160 l~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~ 237 (290)
T cd05045 160 VAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPE--R 237 (290)
T ss_pred EcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHH--H
Confidence 9999999999998752 13456899999999999998 99998643211 1
Q ss_pred HHHHHHHhccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhh
Q 045127 418 FIEYIRMHYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKS 482 (508)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 482 (508)
+......... ... . ......+.+++.+||+.+|++||++.|+++.|+++..+
T Consensus 238 ~~~~~~~~~~--------~~~--~---~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~~ 289 (290)
T cd05045 238 LFNLLKTGYR--------MER--P---ENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMVK 289 (290)
T ss_pred HHHHHhCCCC--------CCC--C---CCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHhc
Confidence 1221111110 000 0 11245678899999999999999999999999998754
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi |
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-35 Score=287.90 Aligned_cols=224 Identities=18% Similarity=0.332 Sum_probs=184.0
Q ss_pred hcCCCCCceeeecCCeEEEEEEECCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEee
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEW 316 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 316 (508)
.++|+..++||+|++|.||+|...++..||+|.+.... ...+.+.+|+.++++++|+||+++++++...+..+++|||
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 82 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT--MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEY 82 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc--hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEec
Confidence 35788899999999999999998888899999986432 2357889999999999999999999999998999999999
Q ss_pred cCCCCHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC----------
Q 045127 317 TNGGNVELWLS---ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY---------- 383 (508)
Q Consensus 317 ~~~gsL~~~l~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~---------- 383 (508)
+++++|.+++. ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.++++|||.+.
T Consensus 83 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~-~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~ 161 (261)
T cd05072 83 MAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK-NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAR 161 (261)
T ss_pred CCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccccchhhEEecCCCcEEECCCccceecCCCceecc
Confidence 99999999986 35688999999999999999999999 99999999999999999999999997742
Q ss_pred ------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcch
Q 045127 384 ------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENM 444 (508)
Q Consensus 384 ------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 444 (508)
.++.++|||||||++|||+| |+.||...... .....+...... +..
T Consensus 162 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~--~~~~~~~~~~~~-------~~~------ 226 (261)
T cd05072 162 EGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNS--DVMSALQRGYRM-------PRM------ 226 (261)
T ss_pred CCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHH--HHHHHHHcCCCC-------CCC------
Confidence 12447899999999999998 99998643211 111111111100 000
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHH
Q 045127 445 FDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITR 478 (508)
Q Consensus 445 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 478 (508)
......+.+++.+|++.+|++||+++++.+.|++
T Consensus 227 ~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 227 ENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred CCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 1123457789999999999999999999999985
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=298.47 Aligned_cols=230 Identities=15% Similarity=0.254 Sum_probs=183.8
Q ss_pred cCCCCCceeeecCCeEEEEEEEC------CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhc-CCCCccceeeEEec-CCe
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILR------DGTRVKIEIYKGDVSREIRDEFVEECKLLVQF-QHKNLIRVLGWNNS-RRT 309 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~-~~~ 309 (508)
++|+..+.||+|+||.||+|... +++.||+|+++........+.+.+|+.++.++ +|+||+++++++.. +..
T Consensus 7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~ 86 (337)
T cd05054 7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGP 86 (337)
T ss_pred HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCC
Confidence 46889999999999999999742 24789999997655555567788999999999 79999999998865 456
Q ss_pred eEEEEeecCCCCHHHHhcc-------------------------------------------------------------
Q 045127 310 RAIVTEWTNGGNVELWLSE------------------------------------------------------------- 328 (508)
Q Consensus 310 ~~lv~e~~~~gsL~~~l~~------------------------------------------------------------- 328 (508)
.+++|||+++++|.+++..
T Consensus 87 ~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (337)
T cd05054 87 LMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELY 166 (337)
T ss_pred EEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHh
Confidence 7899999999999998851
Q ss_pred -CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC------------------------
Q 045127 329 -SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------------------------ 383 (508)
Q Consensus 329 -~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------------------------ 383 (508)
..+++..+..++.||+.||+|||++ ||+||||||+||++++++.++|+|||++.
T Consensus 167 ~~~l~~~~~~~~~~qi~~aL~~lH~~-~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE 245 (337)
T cd05054 167 KEPLTLEDLISYSFQVARGMEFLASR-KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE 245 (337)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCcH
Confidence 2678999999999999999999999 99999999999999999999999999653
Q ss_pred -----CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHHHHHHHHHHh
Q 045127 384 -----QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQAEQGLGLGLM 457 (508)
Q Consensus 384 -----~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~ 457 (508)
.++.++|||||||++|||++ |+.||......+ .+........ . . ... ......+.+++.+
T Consensus 246 ~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~-~~~~~~~~~~----~----~--~~~---~~~~~~~~~l~~~ 311 (337)
T cd05054 246 SIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDE-EFCRRLKEGT----R----M--RAP---EYATPEIYSIMLD 311 (337)
T ss_pred HhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccH-HHHHHHhccC----C----C--CCC---ccCCHHHHHHHHH
Confidence 23557899999999999998 999986432211 1111111100 0 0 000 1224567889999
Q ss_pred cCCCCCCCCCCHHHHHHHHHHHHhh
Q 045127 458 CTDQPTGKLPSLVQIYNMITRAYKS 482 (508)
Q Consensus 458 Cl~~dP~~RPs~~evl~~L~~i~~~ 482 (508)
||+.+|++||++.|+++.|+++.+.
T Consensus 312 cl~~~p~~RPs~~ell~~l~~~~~~ 336 (337)
T cd05054 312 CWHNNPEDRPTFSELVEILGDLLQE 336 (337)
T ss_pred HccCChhhCcCHHHHHHHHHHHHhc
Confidence 9999999999999999999988753
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-36 Score=299.45 Aligned_cols=222 Identities=14% Similarity=0.127 Sum_probs=180.4
Q ss_pred hcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCC--CHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEE
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDV--SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIV 313 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 313 (508)
.++|+..+.||+|+||.||+|... +++.||+|++.... .....+.+.+|+.++++++||||+++++++..++..++|
T Consensus 17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 96 (329)
T PTZ00263 17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFL 96 (329)
T ss_pred chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEE
Confidence 367888999999999999999974 68999999996432 122456788999999999999999999999999999999
Q ss_pred EeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC---------
Q 045127 314 TEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY--------- 383 (508)
Q Consensus 314 ~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~--------- 383 (508)
|||+++|+|.+++. ...+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++.
T Consensus 97 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 175 (329)
T PTZ00263 97 LEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSK-DIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRTFTL 175 (329)
T ss_pred EcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCCHHHEEECCCCCEEEeeccCceEcCCCccee
Confidence 99999999999987 56789999999999999999999999 99999999999999999999999998742
Q ss_pred ---------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHH
Q 045127 384 ---------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQA 448 (508)
Q Consensus 384 ---------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 448 (508)
.++.++|||||||++|||++|+.||...... ...... ....+.... ...
T Consensus 176 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~-----~~~~~i--------~~~~~~~p~---~~~ 239 (329)
T PTZ00263 176 CGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPF-----RIYEKI--------LAGRLKFPN---WFD 239 (329)
T ss_pred cCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHH-----HHHHHH--------hcCCcCCCC---CCC
Confidence 2467899999999999999999999643211 111111 111111111 113
Q ss_pred HHHHHHHHhcCCCCCCCCCC-----HHHHHHH
Q 045127 449 EQGLGLGLMCTDQPTGKLPS-----LVQIYNM 475 (508)
Q Consensus 449 ~~l~~l~~~Cl~~dP~~RPs-----~~evl~~ 475 (508)
..+.+++.+||+.||.+||+ ++++++.
T Consensus 240 ~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 271 (329)
T PTZ00263 240 GRARDLVKGLLQTDHTKRLGTLKGGVADVKNH 271 (329)
T ss_pred HHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 45678999999999999997 6888754
|
|
| >cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-35 Score=288.54 Aligned_cols=229 Identities=17% Similarity=0.246 Sum_probs=181.3
Q ss_pred cCCCCCceeeecCCeEEEEEEE-CCCC----EEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEE
Q 045127 238 NGFSKKNLVGKNEGAAIYKGIL-RDGT----RVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAI 312 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~-~~~~----~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 312 (508)
++|+..+.||+|+||.||+|.+ .+++ .+++|.+..........++..|+..+++++||||+++++++.. ...++
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~~~ 85 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASLQL 85 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-CccEE
Confidence 4678889999999999999997 3444 4788887654444455778889999999999999999998754 45688
Q ss_pred EEeecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-------
Q 045127 313 VTEWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------- 383 (508)
Q Consensus 313 v~e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------- 383 (508)
++||+++|+|.+++. ...+++..+..|+.||+.||+|||+. +++||||||+||++++++.+||+|||.+.
T Consensus 86 i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~~ 164 (279)
T cd05111 86 VTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEH-RMVHRNLAARNILLKSDSIVQIADFGVADLLYPDDK 164 (279)
T ss_pred EEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC-CEeccccCcceEEEcCCCcEEEcCCccceeccCCCc
Confidence 999999999999997 45789999999999999999999999 99999999999999999999999998642
Q ss_pred ----------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhcccC
Q 045127 384 ----------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMML 440 (508)
Q Consensus 384 ----------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 440 (508)
.++.++|||||||++||+++ |+.||...... .+.+.+.... ....
T Consensus 165 ~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~--~~~~~~~~~~----------~~~~ 232 (279)
T cd05111 165 KYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPH--EVPDLLEKGE----------RLAQ 232 (279)
T ss_pred ccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHHCCC----------cCCC
Confidence 23457899999999999998 99998743211 1111111110 0000
Q ss_pred CcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhC
Q 045127 441 TENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSC 483 (508)
Q Consensus 441 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 483 (508)
.. .....+.+++.+||..||++|||+.|+++.|..+....
T Consensus 233 ~~---~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~~ 272 (279)
T cd05111 233 PQ---ICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMARDP 272 (279)
T ss_pred CC---CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhCC
Confidence 00 11334677889999999999999999999999877543
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r |
| >KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-36 Score=302.26 Aligned_cols=223 Identities=11% Similarity=0.152 Sum_probs=185.0
Q ss_pred cCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEee
Q 045127 238 NGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEW 316 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 316 (508)
..|..-.+||+|+.|.||.|.. .+++.||||++...... .++-+.+|+.+|+..+|+|||.+++.|...+..++||||
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~-~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEy 351 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQP-KKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEY 351 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCC-chhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEee
Confidence 4678889999999999999985 67899999999644333 456688999999999999999999998888999999999
Q ss_pred cCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC--------------
Q 045127 317 TNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE-------------- 382 (508)
Q Consensus 317 ~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~-------------- 382 (508)
|+||+|.+.+....+++.++..|+.++++||+|||.+ ||+|||||.+|||++.+|.+||+|||+.
T Consensus 352 m~ggsLTDvVt~~~~~E~qIA~Icre~l~aL~fLH~~-gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~KR~TmV 430 (550)
T KOG0578|consen 352 MEGGSLTDVVTKTRMTEGQIAAICREILQGLKFLHAR-GIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSKRSTMV 430 (550)
T ss_pred cCCCchhhhhhcccccHHHHHHHHHHHHHHHHHHHhc-ceeeeccccceeEeccCCcEEEeeeeeeeccccccCcccccc
Confidence 9999999999988999999999999999999999999 9999999999999999999999999984
Q ss_pred -------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHHH
Q 045127 383 -------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQAE 449 (508)
Q Consensus 383 -------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 449 (508)
..|.+|.||||||++++||+-|++||-... .+..... +...-.+.+... ..-..
T Consensus 431 GTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~----PlrAlyL------Ia~ng~P~lk~~---~klS~ 497 (550)
T KOG0578|consen 431 GTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNEN----PLRALYL------IATNGTPKLKNP---EKLSP 497 (550)
T ss_pred CCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCC----hHHHHHH------HhhcCCCCcCCc---cccCH
Confidence 346789999999999999999999997421 1111111 011111222211 12355
Q ss_pred HHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 450 QGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 450 ~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
.+.++..+||+.||.+||++.|+++.
T Consensus 498 ~~kdFL~~cL~~dv~~RasA~eLL~H 523 (550)
T KOG0578|consen 498 ELKDFLDRCLVVDVEQRASAKELLEH 523 (550)
T ss_pred HHHHHHHHHhhcchhcCCCHHHHhcC
Confidence 66778889999999999999999875
|
|
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-35 Score=289.07 Aligned_cols=225 Identities=22% Similarity=0.335 Sum_probs=182.4
Q ss_pred cCCCCCceeeecCCeEEEEEEE-----CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEE
Q 045127 238 NGFSKKNLVGKNEGAAIYKGIL-----RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAI 312 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 312 (508)
.+|+..+.||+|+||.||+|.+ .++..|++|.+...........+.+|+.++++++||||+++++++..+...++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 84 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM 84 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence 4677889999999999999985 24678999999765555556789999999999999999999999999999999
Q ss_pred EEeecCCCCHHHHhc------------------cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCce
Q 045127 313 VTEWTNGGNVELWLS------------------ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEP 374 (508)
Q Consensus 313 v~e~~~~gsL~~~l~------------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~ 374 (508)
+|||+++++|.+++. ...+++.+...++.|++.||+|||++ +++||||||+||++++++.+
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~-~i~H~dlkp~nili~~~~~~ 163 (283)
T cd05090 85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH-FFVHKDLAARNILIGEQLHV 163 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc-CeehhccccceEEEcCCCcE
Confidence 999999999999984 12478889999999999999999999 99999999999999999999
Q ss_pred EEeeccCCC-----------------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHH
Q 045127 375 LISRFKIEY-----------------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRM 424 (508)
Q Consensus 375 kl~Dfg~~~-----------------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~ 424 (508)
|++|||++. .++.++||||||+++|||++ |..||..... ..+.+.+..
T Consensus 164 kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~--~~~~~~~~~ 241 (283)
T cd05090 164 KISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSN--QEVIEMVRK 241 (283)
T ss_pred EeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHHHc
Confidence 999998752 23567999999999999998 9999864321 111111111
Q ss_pred hccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHH
Q 045127 425 HYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITR 478 (508)
Q Consensus 425 ~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 478 (508)
.. .+.... .....+.+++.+||+.||++||++.+|.+.|..
T Consensus 242 ~~----------~~~~~~---~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 242 RQ----------LLPCSE---DCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred CC----------cCCCCC---CCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 10 000011 123457788899999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=286.68 Aligned_cols=222 Identities=22% Similarity=0.344 Sum_probs=181.1
Q ss_pred cCCCCCceeeecCCeEEEEEEECCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEeec
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWT 317 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 317 (508)
++|+..+.||+|+||.||+|.+.++..+|+|.+..... ....+.+|+.++++++||||+++++++......+++|||+
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM--SEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYM 81 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCcc--cHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcC
Confidence 45778899999999999999987777899999864332 2467899999999999999999999999888899999999
Q ss_pred CCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC------------
Q 045127 318 NGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------------ 383 (508)
Q Consensus 318 ~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------------ 383 (508)
++|+|.+++. ...+++..+..++.||+.||+|||+. |++|+||||+||+++.++.+||+|||.+.
T Consensus 82 ~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~ 160 (256)
T cd05113 82 SNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESK-QFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSVG 160 (256)
T ss_pred CCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeccccCcceEEEcCCCCEEECCCccceecCCCceeecCC
Confidence 9999999987 34689999999999999999999999 99999999999999999999999998532
Q ss_pred ----------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHH
Q 045127 384 ----------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFD 446 (508)
Q Consensus 384 ----------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 446 (508)
.++.++|||||||++|||++ |+.||....... ....+..... .... ..
T Consensus 161 ~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~--~~~~~~~~~~----------~~~~---~~ 225 (256)
T cd05113 161 SKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSE--TVEKVSQGLR----------LYRP---HL 225 (256)
T ss_pred CccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH--HHHHHhcCCC----------CCCC---CC
Confidence 23567999999999999999 999986433211 1111111100 0000 11
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCHHHHHHHHH
Q 045127 447 QAEQGLGLGLMCTDQPTGKLPSLVQIYNMIT 477 (508)
Q Consensus 447 ~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~ 477 (508)
....+.+++.+||+.+|.+|||+.++++.|+
T Consensus 226 ~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 226 ASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred CCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 2456788999999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-35 Score=286.54 Aligned_cols=224 Identities=18% Similarity=0.288 Sum_probs=184.0
Q ss_pred hcCCCCCceeeecCCeEEEEEEECCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEee
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEW 316 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 316 (508)
.++|+..+.||+|++|.||+|...+++.||+|.++.... ..+.+.+|+.++++++||||+++++++...+..+++|||
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 82 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTM--DPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTEL 82 (261)
T ss_pred hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCcc--cHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeec
Confidence 456888899999999999999987788899999865432 356788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC----------
Q 045127 317 TNGGNVELWLSE---SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY---------- 383 (508)
Q Consensus 317 ~~~gsL~~~l~~---~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~---------- 383 (508)
+++++|.+++.. ..+++..+..++.|++.|+.|||+. |++||||||+||++++++.+||+|||.+.
T Consensus 83 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 161 (261)
T cd05068 83 MKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQ-NYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEAR 161 (261)
T ss_pred ccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeeccCCcceEEEcCCCCEEECCcceEEEccCCccccc
Confidence 999999999973 3689999999999999999999999 99999999999999999999999997531
Q ss_pred ------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcch
Q 045127 384 ------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENM 444 (508)
Q Consensus 384 ------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 444 (508)
.++.++||||||+++|||++ |+.||...... .....+..... ....
T Consensus 162 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~~~~~~~~~~~----------~~~~--- 226 (261)
T cd05068 162 EGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNA--EVLQQVDQGYR----------MPCP--- 226 (261)
T ss_pred CCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHH--HHHHHHHcCCC----------CCCC---
Confidence 23457999999999999999 99998643211 11111111100 0000
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHH
Q 045127 445 FDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITR 478 (508)
Q Consensus 445 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 478 (508)
......+.+++.+|++.+|++||++.++++.|++
T Consensus 227 ~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 227 PGCPKELYDIMLDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred CcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 1224567889999999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-35 Score=286.14 Aligned_cols=224 Identities=20% Similarity=0.294 Sum_probs=182.5
Q ss_pred cCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEee
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEW 316 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 316 (508)
.+|+..+.||+|++|.||+|.+. .++.||+|.+.... .....+.+|++++++++||||+++++++......+++|||
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 83 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc--hHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEe
Confidence 35777899999999999999974 58899999986432 2456789999999999999999999999999999999999
Q ss_pred cCCCCHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC----------
Q 045127 317 TNGGNVELWLS---ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY---------- 383 (508)
Q Consensus 317 ~~~gsL~~~l~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~---------- 383 (508)
+++++|.+++. ...+++..+..++.|+++||+|||+. +++||||||+||++++++.+||+|||.+.
T Consensus 84 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~-~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~~ 162 (263)
T cd05052 84 MTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK-NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 162 (263)
T ss_pred CCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CEeecccCcceEEEcCCCcEEeCCCccccccccceeecc
Confidence 99999999986 34589999999999999999999999 99999999999999999999999998632
Q ss_pred ------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcch
Q 045127 384 ------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENM 444 (508)
Q Consensus 384 ------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 444 (508)
.++.++|||||||++|||++ |..||...... .......... .... .
T Consensus 163 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~--~~~~~~~~~~--------~~~~--~--- 227 (263)
T cd05052 163 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYELLEKGY--------RMER--P--- 227 (263)
T ss_pred CCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHHCCC--------CCCC--C---
Confidence 23457899999999999998 99998643211 1111111110 0000 0
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHH
Q 045127 445 FDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRA 479 (508)
Q Consensus 445 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i 479 (508)
......+.+++.+||+.||++|||+.++++.|+.+
T Consensus 228 ~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 228 EGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred CCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 11245678899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=310.51 Aligned_cols=227 Identities=14% Similarity=0.196 Sum_probs=189.1
Q ss_pred cCCCCCceeeecCCeEEEEEEECCC-CEEEEEEecCCCCHHHHHHHHHHHHHHhhcC-CCCccceeeE-Eec------CC
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILRDG-TRVKIEIYKGDVSREIRDEFVEECKLLVQFQ-HKNLIRVLGW-NNS------RR 308 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~~~-~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~-~~~------~~ 308 (508)
.++++.+.|.+|||+.||.|....+ ..+|+|++... .....+.+.+|+++|++|+ |+|||.+++. ... .-
T Consensus 37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~-de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~ 115 (738)
T KOG1989|consen 37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN-DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVW 115 (738)
T ss_pred EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC-CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCcee
Confidence 3456779999999999999998554 99999998655 5567889999999999997 9999999993 221 13
Q ss_pred eeEEEEeecCCCCHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHhhCC-CccccCCCCCCEEecCCCceEEeeccCC--
Q 045127 309 TRAIVTEWTNGGNVELWLS---ESAPSWKHRLKVLIGVVEAMCYLQEQW-PEVDYDLRTGSVLLTDNLEPLISRFKIE-- 382 (508)
Q Consensus 309 ~~~lv~e~~~~gsL~~~l~---~~~l~~~~~~~i~~~i~~~L~~LH~~~-~iiH~Dlkp~NIll~~~~~~kl~Dfg~~-- 382 (508)
+++|.||||.||.|-+++. ...+++.++++|+.|+++|+++||... +|||||||-+||||..++..||||||.+
T Consensus 116 EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt 195 (738)
T KOG1989|consen 116 EVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDFGSATT 195 (738)
T ss_pred EEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCccccccc
Confidence 5789999999999999998 567999999999999999999999983 4999999999999999999999999863
Q ss_pred -------------------------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHh
Q 045127 383 -------------------------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMH 425 (508)
Q Consensus 383 -------------------------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~ 425 (508)
..+++|+|||||||+||-|+....||++...
T Consensus 196 ~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~------------ 263 (738)
T KOG1989|consen 196 KILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGK------------ 263 (738)
T ss_pred ccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcc------------
Confidence 2457899999999999999999999985321
Q ss_pred ccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhC
Q 045127 426 YPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSC 483 (508)
Q Consensus 426 ~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 483 (508)
..+++.....+.. .....++..||..||+.||++||++-+|+..+.++....
T Consensus 264 -----laIlng~Y~~P~~-p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~ 315 (738)
T KOG1989|consen 264 -----LAILNGNYSFPPF-PNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKP 315 (738)
T ss_pred -----eeEEeccccCCCC-ccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCC
Confidence 1222333222221 345778889999999999999999999999999887653
|
|
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-35 Score=288.51 Aligned_cols=227 Identities=20% Similarity=0.358 Sum_probs=182.7
Q ss_pred hhcCCCCCceeeecCCeEEEEEEEC------CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCe
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGILR------DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRT 309 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 309 (508)
.+++|+..+.||+|+||.||+|.+. .+..||+|.+..........++.+|+.+++.++||||+++++++..+..
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~ 83 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP 83 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 4678999999999999999999853 2467999998655444456778999999999999999999999998889
Q ss_pred eEEEEeecCCCCHHHHhcc-----------CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEee
Q 045127 310 RAIVTEWTNGGNVELWLSE-----------SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISR 378 (508)
Q Consensus 310 ~~lv~e~~~~gsL~~~l~~-----------~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~D 378 (508)
.++||||+++|+|.+++.. ..+++..+..++.|++.||+|||+. +++||||||+||++++++.++++|
T Consensus 84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~-~~vH~dlkp~Nil~~~~~~~~l~d 162 (277)
T cd05062 84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN-KFVHRDLAARNCMVAEDFTVKIGD 162 (277)
T ss_pred eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCcchheEEEcCCCCEEECC
Confidence 9999999999999999862 2357788999999999999999999 999999999999999999999999
Q ss_pred ccCCC-----------------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccc
Q 045127 379 FKIEY-----------------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPE 428 (508)
Q Consensus 379 fg~~~-----------------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~ 428 (508)
||.+. .++.++|||||||++|||++ |..||...... ...+.+...
T Consensus 163 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~--~~~~~~~~~--- 237 (277)
T cd05062 163 FGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNE--QVLRFVMEG--- 237 (277)
T ss_pred CCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHHcC---
Confidence 98642 23567899999999999999 78888643211 111111110
Q ss_pred hhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHH
Q 045127 429 NLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITR 478 (508)
Q Consensus 429 ~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 478 (508)
...... ......+.+++.+||+.||++|||+.|+++.|++
T Consensus 238 --------~~~~~~--~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 277 (277)
T cd05062 238 --------GLLDKP--DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 277 (277)
T ss_pred --------CcCCCC--CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence 000000 1124467889999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-35 Score=283.05 Aligned_cols=230 Identities=16% Similarity=0.211 Sum_probs=186.3
Q ss_pred cCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecC--CCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEE
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKG--DVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVT 314 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~--~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 314 (508)
++|+..+.||+|++|.||+|... +|+.||+|.++. .......+.+.+|++++++++|+|++++++++...+..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 67899999999999999999985 789999998863 222334678999999999999999999999999999999999
Q ss_pred eecCCCCHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC------
Q 045127 315 EWTNGGNVELWLS-----ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------ 383 (508)
Q Consensus 315 e~~~~gsL~~~l~-----~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------ 383 (508)
||+++|+|..++. ...+++..+..++.|++.||+|||+. |++||||||+||+++.++.++++|||.+.
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~-~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~ 160 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSK-RIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT 160 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhC-CEecCCcChhhEEECCCCcEEEeccceeeeccCCC
Confidence 9999999999885 34579999999999999999999999 99999999999999999999999998631
Q ss_pred ---------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCc
Q 045127 384 ---------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTE 442 (508)
Q Consensus 384 ---------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 442 (508)
.++.++|||||||++|+|++|+.||..... ............. .+..
T Consensus 161 ~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---~~~~~~~~~~~~~-----~~~~---- 228 (267)
T cd08224 161 TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM---NLYSLCKKIEKCD-----YPPL---- 228 (267)
T ss_pred cccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCc---cHHHHHhhhhcCC-----CCCC----
Confidence 234578999999999999999999864321 1111111110000 0000
Q ss_pred chHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHH
Q 045127 443 NMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAY 480 (508)
Q Consensus 443 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~ 480 (508)
........+.+++.+||..+|++|||+.+|++.|+++.
T Consensus 229 ~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 229 PADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred ChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 00122446778999999999999999999999999874
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-35 Score=289.28 Aligned_cols=225 Identities=21% Similarity=0.332 Sum_probs=184.0
Q ss_pred hcCCCCCceeeecCCeEEEEEEECC------CCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCee
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGILRD------GTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTR 310 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~~~------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 310 (508)
.++|...+.||+|+||.||+|...+ +..||+|.++.....+..+.+.+|++++++++||||+++++++......
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 83 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPP 83 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCe
Confidence 3467888999999999999998632 4789999997655555678899999999999999999999999999999
Q ss_pred EEEEeecCCCCHHHHhcc---------------CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceE
Q 045127 311 AIVTEWTNGGNVELWLSE---------------SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPL 375 (508)
Q Consensus 311 ~lv~e~~~~gsL~~~l~~---------------~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~k 375 (508)
++||||+++++|.+++.. ..+++..+..++.|++.|++|||++ |++||||||+||+++.++.+|
T Consensus 84 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~-~i~h~dlkp~nili~~~~~~k 162 (280)
T cd05049 84 IMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ-HFVHRDLATRNCLVGYDLVVK 162 (280)
T ss_pred EEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC-CeeccccccceEEEcCCCeEE
Confidence 999999999999999862 2468889999999999999999999 999999999999999999999
Q ss_pred EeeccCCC-----------------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHh
Q 045127 376 ISRFKIEY-----------------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMH 425 (508)
Q Consensus 376 l~Dfg~~~-----------------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~ 425 (508)
|+|||.+. .++.++|||||||++|||++ |+.||...... .....+...
T Consensus 163 l~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~--~~~~~~~~~ 240 (280)
T cd05049 163 IGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNE--EVIECITQG 240 (280)
T ss_pred ECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHH--HHHHHHHcC
Confidence 99998642 23567999999999999998 99998643321 111111111
Q ss_pred ccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHH
Q 045127 426 YPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMIT 477 (508)
Q Consensus 426 ~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~ 477 (508)
...... ......+.+++.+||+.||++||++.||++.|+
T Consensus 241 -----------~~~~~~--~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 241 -----------RLLQRP--RTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred -----------CcCCCC--CCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 000000 112456788999999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=291.83 Aligned_cols=235 Identities=14% Similarity=0.108 Sum_probs=180.3
Q ss_pred cCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCC-HHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEe
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVS-REIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTE 315 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 315 (508)
++|+..+.||+|+||.||+|+.. +++.||+|++..... ....+.+.+|+.++++++||||+++++++...+..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE 80 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence 46889999999999999999984 688999999864422 2345678899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-----------
Q 045127 316 WTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY----------- 383 (508)
Q Consensus 316 ~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~----------- 383 (508)
|++++.+..+.. ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||.+.
T Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~-~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~ 159 (287)
T cd07848 81 YVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKN-DIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANYT 159 (287)
T ss_pred cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEEcCCCcEEEeeccCccccccccccccc
Confidence 999987776654 45789999999999999999999999 99999999999999999999999998742
Q ss_pred -----------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHH--HHhccchhhh----------hh
Q 045127 384 -----------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYI--RMHYPENLQL----------VV 434 (508)
Q Consensus 384 -----------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~--~~~~~~~~~~----------~~ 434 (508)
.++.++|||||||++|||++|+.||........ +.... ....+..... ..
T Consensus 160 ~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (287)
T cd07848 160 EYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQ-LFTIQKVLGPLPAEQMKLFYSNPRFHGLR 238 (287)
T ss_pred ccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHhhCCCCHHHHHhhhccchhcccc
Confidence 345679999999999999999999975432111 11100 0000100000 00
Q ss_pred hhcccCCcc-----hHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 435 DERMMLTEN-----MFDQAEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 435 ~~~l~~~~~-----~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
.+....... .......+.+++.+|++.||++|||++|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 239 FPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred cCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 000000000 0012456889999999999999999999885
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=296.79 Aligned_cols=215 Identities=19% Similarity=0.186 Sum_probs=174.8
Q ss_pred ceeeecCCeEEEEEEE-CCCCEEEEEEecCCC--CHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEeecCCC
Q 045127 244 NLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDV--SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWTNGG 320 (508)
Q Consensus 244 ~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 320 (508)
+.||+|+||.||+|.. .+|+.||+|+++... .......+.+|+.++++++||||+++++++..++..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 4699999999999997 568999999996432 2234567789999999999999999999999999999999999999
Q ss_pred CHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC----------------
Q 045127 321 NVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY---------------- 383 (508)
Q Consensus 321 sL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~---------------- 383 (508)
+|.+++. ...+++..+..++.||+.||+|||+. ||+||||||+||+++.++.+||+|||++.
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~-~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~ 159 (323)
T cd05571 81 ELFFHLSRERVFSEDRARFYGAEIVSALGYLHSC-DVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTP 159 (323)
T ss_pred cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC-CeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCcccceecCc
Confidence 9999887 56789999999999999999999999 99999999999999999999999998642
Q ss_pred -----------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHHHHHH
Q 045127 384 -----------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQAEQGL 452 (508)
Q Consensus 384 -----------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~ 452 (508)
.++.++|||||||++|||++|+.||...... .+...+ .. ...... ......+.
T Consensus 160 ~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~--~~~~~~---~~--------~~~~~p---~~~~~~~~ 223 (323)
T cd05571 160 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--KLFELI---LM--------EEIRFP---RTLSPEAK 223 (323)
T ss_pred cccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHH--HHHHHH---Hc--------CCCCCC---CCCCHHHH
Confidence 2456799999999999999999999643211 111111 10 001000 11234567
Q ss_pred HHHHhcCCCCCCCCC-----CHHHHHHH
Q 045127 453 GLGLMCTDQPTGKLP-----SLVQIYNM 475 (508)
Q Consensus 453 ~l~~~Cl~~dP~~RP-----s~~evl~~ 475 (508)
+++.+||+.||++|| ++.++++.
T Consensus 224 ~li~~~L~~dP~~R~~~~~~~~~~ll~h 251 (323)
T cd05571 224 SLLAGLLKKDPKQRLGGGPEDAKEIMEH 251 (323)
T ss_pred HHHHHHccCCHHHcCCCCCCCHHHHHcC
Confidence 888999999999999 79998763
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-36 Score=299.00 Aligned_cols=229 Identities=17% Similarity=0.194 Sum_probs=182.7
Q ss_pred cCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCC--HHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEE
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVS--REIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVT 314 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 314 (508)
++|+..+.||+|+||.||+|... +++.||+|+++.... ......+.+|++++..++||||+++++++..+...++||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 46888999999999999999975 589999999964321 124567889999999999999999999999999999999
Q ss_pred eecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC----------
Q 045127 315 EWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY---------- 383 (508)
Q Consensus 315 e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~---------- 383 (508)
||+++|+|.+++. ...+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||++.
T Consensus 81 e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~-~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~~~~~~~ 159 (333)
T cd05600 81 EYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHEL-GYIHRDLKPENFLIDASGHIKLTDFGLSKGIVTYANSVV 159 (333)
T ss_pred eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCHHHEEECCCCCEEEEeCcCCcccccccCCcc
Confidence 9999999999997 56789999999999999999999999 99999999999999999999999998642
Q ss_pred --------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHHH
Q 045127 384 --------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQAE 449 (508)
Q Consensus 384 --------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 449 (508)
.++.++|||||||++|||++|+.||......+ ....+.. ..... ..+.... .......
T Consensus 160 gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~--~~~~i~~-~~~~~---~~~~~~~--~~~~~s~ 231 (333)
T cd05600 160 GSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNE--TWENLKY-WKETL---QRPVYDD--PRFNLSD 231 (333)
T ss_pred cCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHH--HHHHHHh-ccccc---cCCCCCc--cccccCH
Confidence 34678999999999999999999997532211 1111100 00000 0000000 0012245
Q ss_pred HHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 450 QGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 450 ~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
.+.+++.+|+..+|.+||++.++++.
T Consensus 232 ~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 232 EAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred HHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 67788899999999999999999975
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-35 Score=285.56 Aligned_cols=227 Identities=26% Similarity=0.455 Sum_probs=185.5
Q ss_pred hcCCCCCceeeecCCeEEEEEEEC-CC---CEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEE
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGILR-DG---TRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAI 312 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~~-~~---~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 312 (508)
.++|+..+.||+|+||.||+|... ++ ..+|+|.+.........+.+..|++++++++|||++++.+++...+..++
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMI 83 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEE
Confidence 356788899999999999999974 33 37999998765555567789999999999999999999999999999999
Q ss_pred EEeecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-------
Q 045127 313 VTEWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------- 383 (508)
Q Consensus 313 v~e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------- 383 (508)
||||+++++|.+++. ...+++.++..++.|++.|++|||+. |++||||||+||+++.++.+|++|||.+.
T Consensus 84 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~-~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~ 162 (268)
T cd05063 84 ITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDM-NYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPE 162 (268)
T ss_pred EEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccccchhhEEEcCCCcEEECCCccceecccccc
Confidence 999999999999987 45689999999999999999999999 99999999999999999999999998642
Q ss_pred -----------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhccc
Q 045127 384 -----------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMM 439 (508)
Q Consensus 384 -----------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 439 (508)
.++.++|||||||++||+++ |+.||...... .+...+.... ...
T Consensus 163 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~--~~~~~i~~~~----------~~~ 230 (268)
T cd05063 163 GTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNH--EVMKAINDGF----------RLP 230 (268)
T ss_pred cceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHH--HHHHHHhcCC----------CCC
Confidence 22457899999999999998 99998643211 1111111100 000
Q ss_pred CCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHH
Q 045127 440 LTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRA 479 (508)
Q Consensus 440 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i 479 (508)
. .......+.+++.+||+.+|++||++.+|++.|+++
T Consensus 231 ~---~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 231 A---PMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred C---CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 0 012245678999999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-35 Score=299.44 Aligned_cols=222 Identities=16% Similarity=0.260 Sum_probs=176.5
Q ss_pred cCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEee
Q 045127 238 NGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEW 316 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 316 (508)
++|+..+.||+|+||.||+|.. .+++.||||++...........+.+|+++++.++|+||+++++++...+..++||||
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 153 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEF 153 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEec
Confidence 4556678999999999999997 468999999997655555667899999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCCC------------
Q 045127 317 TNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEYQ------------ 384 (508)
Q Consensus 317 ~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~------------ 384 (508)
+++|+|... ...++..+..++.||+.||+|||++ ||+||||||+|||+++++.+||+|||++..
T Consensus 154 ~~~~~L~~~---~~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~ 229 (353)
T PLN00034 154 MDGGSLEGT---HIADEQFLADVARQILSGIAYLHRR-HIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDPCNSSV 229 (353)
T ss_pred CCCCccccc---ccCCHHHHHHHHHHHHHHHHHHHHC-CEeecCCCHHHEEEcCCCCEEEcccccceecccccccccccc
Confidence 999998754 3456778889999999999999999 999999999999999999999999987421
Q ss_pred --------------------CCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcch
Q 045127 385 --------------------HRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENM 444 (508)
Q Consensus 385 --------------------~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 444 (508)
.+.++|||||||++|||++|+.||....... ........... ..+.. .
T Consensus 230 gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~--~~~~~~~~~~~-----~~~~~-----~ 297 (353)
T PLN00034 230 GTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGD--WASLMCAICMS-----QPPEA-----P 297 (353)
T ss_pred cCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcc--HHHHHHHHhcc-----CCCCC-----C
Confidence 1237899999999999999999997322111 11111100000 00000 0
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 445 FDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 445 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
......+.+++.+||+.||++|||+.|+++.
T Consensus 298 ~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 298 ATASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred CccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1224567889999999999999999999875
|
|
| >cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-35 Score=286.32 Aligned_cols=230 Identities=20% Similarity=0.312 Sum_probs=188.9
Q ss_pred hcCCCCCceeeecCCeEEEEEEECC-----CCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEec-CCee
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGILRD-----GTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNS-RRTR 310 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~~~ 310 (508)
.++|+..+.||+|+||.||+|.+.+ +..|++|.+...........+.+|+.++++++||||+++++++.. +...
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 84 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPP 84 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCC
Confidence 4678888999999999999999754 688999999766566667889999999999999999999998775 5678
Q ss_pred EEEEeecCCCCHHHHhcc---------CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccC
Q 045127 311 AIVTEWTNGGNVELWLSE---------SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKI 381 (508)
Q Consensus 311 ~lv~e~~~~gsL~~~l~~---------~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~ 381 (508)
++++||+++|+|.+++.. ..+++.++..++.|++.||+|||+. +++||||||+||++++++.+|++|||+
T Consensus 85 ~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~i~H~di~p~nil~~~~~~~kl~d~g~ 163 (280)
T cd05043 85 FVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR-GVIHKDIAARNCVIDEELQVKITDNAL 163 (280)
T ss_pred EEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC-CEeecccCHhhEEEcCCCcEEECCCCC
Confidence 999999999999999862 4588999999999999999999999 999999999999999999999999987
Q ss_pred CCC-----------------------------CCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhh
Q 045127 382 EYQ-----------------------------HRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQ 431 (508)
Q Consensus 382 ~~~-----------------------------~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~ 431 (508)
++. ++.++||||||+++||+++ |+.||..... ..+..++.....
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--~~~~~~~~~~~~---- 237 (280)
T cd05043 164 SRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDP--FEMAAYLKDGYR---- 237 (280)
T ss_pred cccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCH--HHHHHHHHcCCC----
Confidence 532 3457999999999999999 9999974321 122222221110
Q ss_pred hhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhh
Q 045127 432 LVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKS 482 (508)
Q Consensus 432 ~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 482 (508)
+... ......+.+++.+||..||++|||+.++++.|+++.+.
T Consensus 238 ------~~~~---~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~~ 279 (280)
T cd05043 238 ------LAQP---INCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHAQ 279 (280)
T ss_pred ------CCCC---CcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhc
Confidence 0000 11234678899999999999999999999999998653
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It |
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-35 Score=281.13 Aligned_cols=218 Identities=23% Similarity=0.389 Sum_probs=180.0
Q ss_pred ceeeecCCeEEEEEEECCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEeecCCCCHH
Q 045127 244 NLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWTNGGNVE 323 (508)
Q Consensus 244 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~ 323 (508)
+.||+|+||.||+|...++..+|+|.++..........+.+|++++++++||||+++++++......++||||+++++|.
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 80 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL 80 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence 36899999999999988889999999976665555667999999999999999999999999999999999999999999
Q ss_pred HHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC------------------
Q 045127 324 LWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------------------ 383 (508)
Q Consensus 324 ~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------------------ 383 (508)
+++. ...+++..+..++.|++.||.|+|++ |++||||||+||+++.++.+|++|||++.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~ 159 (250)
T cd05085 81 SFLRKKKDELKTKQLVKFALDAAAGMAYLESK-NCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIPIK 159 (250)
T ss_pred HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeecccChheEEEcCCCeEEECCCccceeccccccccCCCCCCccc
Confidence 9987 44678999999999999999999999 99999999999999999999999998642
Q ss_pred ----------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHHHHHH
Q 045127 384 ----------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQAEQGL 452 (508)
Q Consensus 384 ----------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~ 452 (508)
.++.++||||||+++||+++ |..||...... .....+.... ..... ......+.
T Consensus 160 y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~--~~~~~~~~~~----------~~~~~---~~~~~~~~ 224 (250)
T cd05085 160 WTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQ--QAREQVEKGY----------RMSCP---QKCPDDVY 224 (250)
T ss_pred ccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHH--HHHHHHHcCC----------CCCCC---CCCCHHHH
Confidence 23457999999999999998 99998643211 1111111110 00000 11245678
Q ss_pred HHHHhcCCCCCCCCCCHHHHHHHHH
Q 045127 453 GLGLMCTDQPTGKLPSLVQIYNMIT 477 (508)
Q Consensus 453 ~l~~~Cl~~dP~~RPs~~evl~~L~ 477 (508)
+++.+|++.+|++||++.|+++.|.
T Consensus 225 ~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 225 KVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred HHHHHHcccCcccCCCHHHHHHHhc
Confidence 8999999999999999999998874
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-36 Score=297.54 Aligned_cols=231 Identities=19% Similarity=0.324 Sum_probs=192.3
Q ss_pred CCCCceeeecCCeEEEEEEECCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEeecCC
Q 045127 240 FSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWTNG 319 (508)
Q Consensus 240 ~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 319 (508)
....++||+|-||.|..+....+..||||.++.......+.+|.+|+++|.+++||||++++|+|..++.+++|+|||++
T Consensus 540 L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYmEn 619 (807)
T KOG1094|consen 540 LRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYMEN 619 (807)
T ss_pred eehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHHhc
Confidence 45568999999999999999878999999999888887889999999999999999999999999999999999999999
Q ss_pred CCHHHHhccCC---CCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-------------
Q 045127 320 GNVELWLSESA---PSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------------- 383 (508)
Q Consensus 320 gsL~~~l~~~~---l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------------- 383 (508)
|+|.+++.... ..-....+|+.||+.|++||.+. ++||||+.+.|+|+|.++++||+|||+++
T Consensus 620 GDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~-nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~vqgr 698 (807)
T KOG1094|consen 620 GDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESL-NFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRVQGR 698 (807)
T ss_pred CcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhh-chhhccccccceeecCcccEEecCcccccccccCCceeeecc
Confidence 99999998432 24456678999999999999999 99999999999999999999999999853
Q ss_pred ----------------CCCCcchhhHHHHHHHHHHh--CCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchH
Q 045127 384 ----------------QHRSTKYVYKFGLFLLEMIT--NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMF 445 (508)
Q Consensus 384 ----------------~~~~~~Dv~SlGvil~ellt--g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 445 (508)
+++.++|||+||+++||+++ ...||.+..++. ..+-....++..-...+-. ...
T Consensus 699 ~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~--vven~~~~~~~~~~~~~l~------~P~ 770 (807)
T KOG1094|consen 699 AVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQ--VVENAGEFFRDQGRQVVLS------RPP 770 (807)
T ss_pred eeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHH--HHHhhhhhcCCCCcceecc------CCC
Confidence 56789999999999999876 889998665432 2222222222221111111 112
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHH
Q 045127 446 DQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRA 479 (508)
Q Consensus 446 ~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i 479 (508)
-+...+.+++++||..|..+|||++++...|.+.
T Consensus 771 ~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 771 ACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred cCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 3466788999999999999999999999988765
|
|
| >KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-36 Score=290.02 Aligned_cols=231 Identities=17% Similarity=0.172 Sum_probs=185.6
Q ss_pred HhhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCH-------------HHHHHHHHHHHHHhhcCCCCccce
Q 045127 235 AATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSR-------------EIRDEFVEECKLLVQFQHKNLIRV 300 (508)
Q Consensus 235 ~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~-------------~~~~~~~~E~~~l~~l~h~niv~~ 300 (508)
...+.|+....||+|.||.|-+|+. .+++.||||++.+.... ...+...+|+.+|++++|||||++
T Consensus 94 k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~L 173 (576)
T KOG0585|consen 94 KQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKL 173 (576)
T ss_pred eehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEE
Confidence 4567899999999999999999996 57999999999633111 113578999999999999999999
Q ss_pred eeEEecC--CeeEEEEeecCCCCHHHHhccCC-CCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEe
Q 045127 301 LGWNNSR--RTRAIVTEWTNGGNVELWLSESA-PSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLIS 377 (508)
Q Consensus 301 ~~~~~~~--~~~~lv~e~~~~gsL~~~l~~~~-l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~ 377 (508)
+.+..+. +..|||+|||..|.+...-.... ++..++.+++.+++.||+|||.+ |||||||||+|+|++++|++||+
T Consensus 174 iEvLDDP~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~Q-giiHRDIKPsNLLl~~~g~VKIs 252 (576)
T KOG0585|consen 174 IEVLDDPESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQ-GIIHRDIKPSNLLLSSDGTVKIS 252 (576)
T ss_pred EEeecCcccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhc-CeeccccchhheEEcCCCcEEee
Confidence 9998864 67899999999988766555455 89999999999999999999999 99999999999999999999999
Q ss_pred eccCCC------------------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHH
Q 045127 378 RFKIEY------------------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEY 421 (508)
Q Consensus 378 Dfg~~~------------------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~ 421 (508)
|||.+. ..+.+.||||+||+||.|+.|+.||.+... .
T Consensus 253 DFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~-----~-- 325 (576)
T KOG0585|consen 253 DFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFE-----L-- 325 (576)
T ss_pred ccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchH-----H--
Confidence 997632 123567999999999999999999964321 1
Q ss_pred HHHhccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHH
Q 045127 422 IRMHYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAY 480 (508)
Q Consensus 422 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~ 480 (508)
+-...++...+..+.. .+....+.+++.++|++||+.|.+..+|........
T Consensus 326 ------~l~~KIvn~pL~fP~~-pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~ 377 (576)
T KOG0585|consen 326 ------ELFDKIVNDPLEFPEN-PEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTR 377 (576)
T ss_pred ------HHHHHHhcCcccCCCc-ccccHHHHHHHHHHhhcChhheeehhhheecceecc
Confidence 1122334444432222 245667788999999999999999999987765443
|
|
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-35 Score=283.94 Aligned_cols=221 Identities=21% Similarity=0.337 Sum_probs=180.7
Q ss_pred cCCCCCceeeecCCeEEEEEEECCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEeec
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWT 317 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 317 (508)
.+|+..+.||+|+||.||+|.++++..+|+|.+..... ....+.+|++++++++||||+++++++......++||||+
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAM--SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYM 81 (256)
T ss_pred HHcchhhhhccCCCceEEEeEecCCccEEEEEeccCCC--CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecC
Confidence 35778899999999999999987778899999864332 2356888999999999999999999999989999999999
Q ss_pred CCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC------------
Q 045127 318 NGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------------ 383 (508)
Q Consensus 318 ~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------------ 383 (508)
++++|.+++. ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.+|++|||.+.
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~~~ 160 (256)
T cd05059 82 ANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESN-GFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQG 160 (256)
T ss_pred CCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC-CcccccccHhhEEECCCCcEEECCcccceecccccccccCC
Confidence 9999999986 44689999999999999999999999 99999999999999999999999998532
Q ss_pred ----------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHH
Q 045127 384 ----------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFD 446 (508)
Q Consensus 384 ----------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 446 (508)
.++.++||||||+++||+++ |+.||......+ ....+.... .... . ..
T Consensus 161 ~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--~~~~~~~~~--------~~~~--~---~~ 225 (256)
T cd05059 161 TKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSE--VVESVSAGY--------RLYR--P---KL 225 (256)
T ss_pred CCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHH--HHHHHHcCC--------cCCC--C---CC
Confidence 23457999999999999999 899987432211 111111110 0000 0 11
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCHHHHHHHH
Q 045127 447 QAEQGLGLGLMCTDQPTGKLPSLVQIYNMI 476 (508)
Q Consensus 447 ~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L 476 (508)
....+.+++.+||..+|++|||+.|+++.|
T Consensus 226 ~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 226 APTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred CCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 245688899999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-35 Score=285.38 Aligned_cols=230 Identities=17% Similarity=0.251 Sum_probs=185.3
Q ss_pred hcCCCCCceeeecCCeEEEEEEE-CCCC----EEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeE
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGIL-RDGT----RVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRA 311 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~----~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 311 (508)
..+|+..+.||+|+||.||+|.+ .+++ .||+|+++..........+.+|+.+++.++||||+++++++... ..+
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~ 84 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTS-TVQ 84 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC-CcE
Confidence 35688889999999999999986 3444 48999997666665677899999999999999999999998754 468
Q ss_pred EEEeecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC------
Q 045127 312 IVTEWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------ 383 (508)
Q Consensus 312 lv~e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------ 383 (508)
++|||+++|+|.+++. ...+++..+..++.|++.||+|||++ +++||||||+||++++++.+||+|||.+.
T Consensus 85 l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~-~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~ 163 (279)
T cd05109 85 LVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEV-RLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDE 163 (279)
T ss_pred EEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccccccceEEEcCCCcEEECCCCceeeccccc
Confidence 9999999999999997 34689999999999999999999999 99999999999999999999999998642
Q ss_pred -----------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhccc
Q 045127 384 -----------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMM 439 (508)
Q Consensus 384 -----------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 439 (508)
.++.++|||||||++|||++ |..||+..... .+..++..... ..
T Consensus 164 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~~~~~~~~~~~----------~~ 231 (279)
T cd05109 164 TEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAR--EIPDLLEKGER----------LP 231 (279)
T ss_pred ceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHHCCCc----------CC
Confidence 23456899999999999998 99998643211 12222211100 00
Q ss_pred CCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhC
Q 045127 440 LTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSC 483 (508)
Q Consensus 440 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 483 (508)
.. ......+.+++.+||+.||++||++.|+++.|+.+....
T Consensus 232 ~~---~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~ 272 (279)
T cd05109 232 QP---PICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARDP 272 (279)
T ss_pred CC---ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCC
Confidence 00 112456778999999999999999999999998886554
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-35 Score=290.23 Aligned_cols=231 Identities=20% Similarity=0.326 Sum_probs=181.4
Q ss_pred cCCCCCceeeecCCeEEEEEEECC---------------CCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceee
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILRD---------------GTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLG 302 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~~---------------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~ 302 (508)
++|+..+.||+|+||.||++...+ ...||+|.++..........+.+|++++++++|||++++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~ 84 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG 84 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence 578889999999999999987632 13589999976655656778999999999999999999999
Q ss_pred EEecCCeeEEEEeecCCCCHHHHhccC-------------CCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEec
Q 045127 303 WNNSRRTRAIVTEWTNGGNVELWLSES-------------APSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLT 369 (508)
Q Consensus 303 ~~~~~~~~~lv~e~~~~gsL~~~l~~~-------------~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~ 369 (508)
++......++||||+++++|.+++... .+++..+..++.|++.||+|||+. +++||||||+||+++
T Consensus 85 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~-~i~H~dlkp~Nill~ 163 (295)
T cd05097 85 VCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL-NFVHRDLATRNCLVG 163 (295)
T ss_pred EEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc-CeeccccChhhEEEc
Confidence 999999999999999999999998621 368889999999999999999999 999999999999999
Q ss_pred CCCceEEeeccCCC-----------------------------CCCCcchhhHHHHHHHHHHh--CCCCCcccccCcccH
Q 045127 370 DNLEPLISRFKIEY-----------------------------QHRSTKYVYKFGLFLLEMIT--NRRPLEEFERGEAGF 418 (508)
Q Consensus 370 ~~~~~kl~Dfg~~~-----------------------------~~~~~~Dv~SlGvil~ellt--g~~P~~~~~~~~~~~ 418 (508)
+++.+|++|||.+. .++.++|||||||++|||++ |..||....... .
T Consensus 164 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~--~ 241 (295)
T cd05097 164 NHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQ--V 241 (295)
T ss_pred CCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHH--H
Confidence 99999999998642 23568999999999999998 667776432211 1
Q ss_pred HHHHHHhccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHH
Q 045127 419 IEYIRMHYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMIT 477 (508)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~ 477 (508)
................ .... ......+.+++.+||+.||++|||+++|++.|+
T Consensus 242 ~~~~~~~~~~~~~~~~---~~~~---~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 242 IENTGEFFRNQGRQIY---LSQT---PLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred HHHHHHhhhhcccccc---CCCC---CCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 1111111100000000 0000 012357889999999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-36 Score=287.22 Aligned_cols=222 Identities=15% Similarity=0.211 Sum_probs=184.7
Q ss_pred cCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCC--HHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEE
Q 045127 238 NGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVS--REIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVT 314 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 314 (508)
.+|+..+.||+|.||.|-+|.. ..|+.||||.++.+.. .+..-.+.+|+++|+.++||||+.++.+|+..+.+.|||
T Consensus 53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivM 132 (668)
T KOG0611|consen 53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVM 132 (668)
T ss_pred hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEE
Confidence 4677788999999999999985 6799999999976543 345667899999999999999999999999999999999
Q ss_pred eecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCCC---------
Q 045127 315 EWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEYQ--------- 384 (508)
Q Consensus 315 e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~--------- 384 (508)
||..+|.|++|+. .+.+++.++..++.||+.|+.|+|.+ +++|||||.+|||+|+++++||+|||++..
T Consensus 133 EYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHkn-rVvHRDLKLENILLD~N~NiKIADFGLSNly~~~kfLqT 211 (668)
T KOG0611|consen 133 EYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKN-RVVHRDLKLENILLDQNNNIKIADFGLSNLYADKKFLQT 211 (668)
T ss_pred EecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhc-cceecccchhheeecCCCCeeeeccchhhhhccccHHHH
Confidence 9999999999998 78899999999999999999999999 999999999999999999999999998421
Q ss_pred ------------------CCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHH
Q 045127 385 ------------------HRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFD 446 (508)
Q Consensus 385 ------------------~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 446 (508)
-.+..|-||+||+||-|+.|.+||++... ...+++.-. ..... .+
T Consensus 212 FCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dh-----k~lvrQIs~--------GaYrE----P~ 274 (668)
T KOG0611|consen 212 FCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDH-----KRLVRQISR--------GAYRE----PE 274 (668)
T ss_pred hcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchH-----HHHHHHhhc--------ccccC----CC
Confidence 13678999999999999999999985431 111222111 11111 11
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCHHHHHHHHH
Q 045127 447 QAEQGLGLGLMCTDQPTGKLPSLVQIYNMIT 477 (508)
Q Consensus 447 ~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~ 477 (508)
.......++.+|+..+|++|.|+.+|.....
T Consensus 275 ~PSdA~gLIRwmLmVNP~RRATieDiAsHWW 305 (668)
T KOG0611|consen 275 TPSDASGLIRWMLMVNPERRATIEDIASHWW 305 (668)
T ss_pred CCchHHHHHHHHHhcCcccchhHHHHhhhhe
Confidence 2333455788999999999999999998754
|
|
| >cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-35 Score=287.90 Aligned_cols=230 Identities=21% Similarity=0.323 Sum_probs=185.5
Q ss_pred cCCCCCceeeecCCeEEEEEEEC------CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeE
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILR------DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRA 311 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 311 (508)
++|...+.||+|+||.||+|... ++..+++|.+.... ....+.+.+|+..+++++||||+++++++......+
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 83 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPT-LAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLI 83 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCcc-HHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceE
Confidence 45777899999999999999852 34568899985433 334577899999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHhcc-----------------CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCce
Q 045127 312 IVTEWTNGGNVELWLSE-----------------SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEP 374 (508)
Q Consensus 312 lv~e~~~~gsL~~~l~~-----------------~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~ 374 (508)
+||||+++++|.+++.. ..+++..+..++.|++.||+|||++ |++||||||+||+++.++.+
T Consensus 84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~-~i~H~dlkp~Nil~~~~~~~ 162 (291)
T cd05094 84 MVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ-HFVHRDLATRNCLVGANLLV 162 (291)
T ss_pred EEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC-CeeecccCcceEEEccCCcE
Confidence 99999999999999862 2378999999999999999999999 99999999999999999999
Q ss_pred EEeeccCCC-----------------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHH
Q 045127 375 LISRFKIEY-----------------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRM 424 (508)
Q Consensus 375 kl~Dfg~~~-----------------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~ 424 (508)
+|+|||.+. .++.++||||||+++|||+| |+.||....... .......
T Consensus 163 ~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~--~~~~~~~ 240 (291)
T cd05094 163 KIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE--VIECITQ 240 (291)
T ss_pred EECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHhC
Confidence 999998742 23457999999999999999 999986433211 1111111
Q ss_pred hccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhCC
Q 045127 425 HYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSCP 484 (508)
Q Consensus 425 ~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 484 (508)
. ..... .......+.+++.+||+.||++|||+.+|++.|+++.+..+
T Consensus 241 ~-----------~~~~~--~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~~~ 287 (291)
T cd05094 241 G-----------RVLER--PRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKATP 287 (291)
T ss_pred C-----------CCCCC--CccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhhcC
Confidence 0 00000 01124567899999999999999999999999999976543
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n |
| >cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-35 Score=287.48 Aligned_cols=229 Identities=21% Similarity=0.304 Sum_probs=185.4
Q ss_pred cCCCCCceeeecCCeEEEEEEEC------CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeE
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILR------DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRA 311 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 311 (508)
.+|...+.||+|+||.||++... ++..+|+|.+... .......+.+|++++++++||||+++++++......+
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 83 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA-SDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI 83 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCc-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccE
Confidence 46788899999999999999852 2456899988643 3345678999999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHhcc--------------CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEe
Q 045127 312 IVTEWTNGGNVELWLSE--------------SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLIS 377 (508)
Q Consensus 312 lv~e~~~~gsL~~~l~~--------------~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~ 377 (508)
+||||+++++|.+++.. ..+++..+..++.|++.||+|||++ |++||||||+||++++++.+||+
T Consensus 84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~-~i~H~dlkp~Nili~~~~~~kl~ 162 (288)
T cd05093 84 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ-HFVHRDLATRNCLVGENLLVKIG 162 (288)
T ss_pred EEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeecccCcceEEEccCCcEEec
Confidence 99999999999999862 2489999999999999999999999 99999999999999999999999
Q ss_pred eccCCC-----------------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhcc
Q 045127 378 RFKIEY-----------------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYP 427 (508)
Q Consensus 378 Dfg~~~-----------------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~ 427 (508)
|||.+. .++.++|||||||++|||++ |..||....... ....+...
T Consensus 163 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~--~~~~i~~~-- 238 (288)
T cd05093 163 DFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE--VIECITQG-- 238 (288)
T ss_pred cCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHcC--
Confidence 998642 23557999999999999998 999986433211 11111110
Q ss_pred chhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhC
Q 045127 428 ENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSC 483 (508)
Q Consensus 428 ~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 483 (508)
.. ... . ......+.+++.+||+.||.+|||+.|+.+.|+++....
T Consensus 239 -~~-----~~~--~---~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~~ 283 (288)
T cd05093 239 -RV-----LQR--P---RTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKAS 283 (288)
T ss_pred -Cc-----CCC--C---CCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHhc
Confidence 00 000 0 012346788999999999999999999999999998654
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly |
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-35 Score=294.10 Aligned_cols=231 Identities=16% Similarity=0.256 Sum_probs=182.9
Q ss_pred hcCCCCCceeeecCCeEEEEEEE------CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhc-CCCCccceeeEEecC-C
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGIL------RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQF-QHKNLIRVLGWNNSR-R 308 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~-~ 308 (508)
.++|+..+.||+|+||.||+|.+ .+++.||||+++..........+.+|+.++.++ +||||+++++++... .
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 85 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCC
Confidence 35789999999999999999974 346789999997655555567789999999999 689999999988654 4
Q ss_pred eeEEEEeecCCCCHHHHhcc------------------------------------------------------------
Q 045127 309 TRAIVTEWTNGGNVELWLSE------------------------------------------------------------ 328 (508)
Q Consensus 309 ~~~lv~e~~~~gsL~~~l~~------------------------------------------------------------ 328 (508)
..+++|||+++|+|.+++..
T Consensus 86 ~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (343)
T cd05103 86 PLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE 165 (343)
T ss_pred ceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhh
Confidence 67899999999999998752
Q ss_pred --------CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-----------------
Q 045127 329 --------SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY----------------- 383 (508)
Q Consensus 329 --------~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~----------------- 383 (508)
..+++..+.+++.|+++||+|||++ +|+||||||+||+++.++.+|++|||++.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~ 244 (343)
T cd05103 166 AEQEDLYKKVLTLEDLICYSFQVAKGMEFLASR-KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLP 244 (343)
T ss_pred hhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCCC
Confidence 2367888899999999999999999 99999999999999999999999998642
Q ss_pred ------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHHHH
Q 045127 384 ------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQAEQ 450 (508)
Q Consensus 384 ------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 450 (508)
.++.++||||||+++|||++ |..||....... .+...+..... ... .. .....
T Consensus 245 ~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-~~~~~~~~~~~--------~~~--~~---~~~~~ 310 (343)
T cd05103 245 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-EFCRRLKEGTR--------MRA--PD---YTTPE 310 (343)
T ss_pred cceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccH-HHHHHHhccCC--------CCC--CC---CCCHH
Confidence 23457899999999999997 999987533211 11111111000 000 00 11235
Q ss_pred HHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhh
Q 045127 451 GLGLGLMCTDQPTGKLPSLVQIYNMITRAYKS 482 (508)
Q Consensus 451 l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 482 (508)
+.+++..||+.||++|||+.||++.|+.+.+.
T Consensus 311 ~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~~ 342 (343)
T cd05103 311 MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 342 (343)
T ss_pred HHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 77889999999999999999999999988754
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-35 Score=293.71 Aligned_cols=233 Identities=13% Similarity=0.142 Sum_probs=175.3
Q ss_pred CCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCC-CHHHHHHHHHHHHHHhhcCCCCccceeeEEecC-----CeeE
Q 045127 239 GFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDV-SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSR-----RTRA 311 (508)
Q Consensus 239 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-----~~~~ 311 (508)
+|+..+.||+|+||.||+|.. .+++.||||.+.... .......+.+|+.++++++||||+++++++... ...+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 477889999999999999997 468999999986432 223456788999999999999999999987643 2479
Q ss_pred EEEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-------
Q 045127 312 IVTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------- 383 (508)
Q Consensus 312 lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------- 383 (508)
+||||+. ++|.+++. ...+++..+..++.|+++||+|||++ ||+||||||+|||++.++.+||+|||++.
T Consensus 81 lv~e~~~-~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~ 158 (338)
T cd07859 81 VVFELME-SDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTA-NVFHRDLKPKNILANADCKLKICDFGLARVAFNDTP 158 (338)
T ss_pred EEEecCC-CCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHeEECCCCcEEEccCccccccccccC
Confidence 9999995 68988887 56789999999999999999999999 99999999999999999999999998642
Q ss_pred -------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhcc-----------
Q 045127 384 -------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYP----------- 427 (508)
Q Consensus 384 -------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~----------- 427 (508)
.++.++|||||||++|||++|+.||....... ....+.....
T Consensus 159 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~i~ 236 (338)
T cd07859 159 TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVH--QLDLITDLLGTPSPETISRVR 236 (338)
T ss_pred ccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHH--HHHHHHHHhCCCCHHHHHHhh
Confidence 23457899999999999999999996432110 0111110000
Q ss_pred -chhhhhhhhcccCCcc-----hHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 428 -ENLQLVVDERMMLTEN-----MFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 428 -~~~~~~~~~~l~~~~~-----~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
......+......... .......+.+++.+||+.||++|||++|+++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h 290 (338)
T cd07859 237 NEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD 290 (338)
T ss_pred hhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 0000011000000000 00113456789999999999999999999975
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-36 Score=301.06 Aligned_cols=224 Identities=13% Similarity=0.178 Sum_probs=186.8
Q ss_pred hhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCC--CCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEE
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGD--VSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAI 312 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 312 (508)
..+-|+.++-||.|+.|.|-.|++ .+|+.+|||++... ........+.+|+-+|+-+.||||+++++++++..+.|+
T Consensus 10 tiGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lyl 89 (786)
T KOG0588|consen 10 TIGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYL 89 (786)
T ss_pred cccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEE
Confidence 346788899999999999999997 68999999999644 222346778999999999999999999999999999999
Q ss_pred EEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC--------
Q 045127 313 VTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY-------- 383 (508)
Q Consensus 313 v~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~-------- 383 (508)
|.||+++|-|.+++- ++++++.++.++++||+.|+.|+|.. +|+|||+||+|+|+|..+++||+|||++.
T Consensus 90 vlEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~-~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gklL 168 (786)
T KOG0588|consen 90 VLEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAF-NICHRDLKPENLLLDVKNNIKIADFGMASLEVPGKLL 168 (786)
T ss_pred EEEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhh-cceeccCCchhhhhhcccCEeeeccceeecccCCccc
Confidence 999999999999987 88999999999999999999999999 99999999999999999999999999841
Q ss_pred -------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcch
Q 045127 384 -------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENM 444 (508)
Q Consensus 384 -------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 444 (508)
....++||||.|||||.|+||+.||++. ++.....+.... .+..+.
T Consensus 169 eTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDd-----Nir~LLlKV~~G--------~f~MPs-- 233 (786)
T KOG0588|consen 169 ETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDD-----NIRVLLLKVQRG--------VFEMPS-- 233 (786)
T ss_pred cccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCc-----cHHHHHHHHHcC--------cccCCC--
Confidence 2246899999999999999999999843 233222221111 111111
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHH
Q 045127 445 FDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMI 476 (508)
Q Consensus 445 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L 476 (508)
....+..+++.+|+..||++|.|++||++..
T Consensus 234 -~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP 264 (786)
T KOG0588|consen 234 -NISSEAQDLLRRMLDVDPSTRITTEEILKHP 264 (786)
T ss_pred -cCCHHHHHHHHHHhccCccccccHHHHhhCc
Confidence 1244566788899999999999999999874
|
|
| >cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-35 Score=289.20 Aligned_cols=230 Identities=20% Similarity=0.304 Sum_probs=186.1
Q ss_pred HhhcCCCCCceeeecCCeEEEEEEECC------CCEEEEEEecCCCCHHHHHHHHHHHHHHhhc-CCCCccceeeEEecC
Q 045127 235 AATNGFSKKNLVGKNEGAAIYKGILRD------GTRVKIEIYKGDVSREIRDEFVEECKLLVQF-QHKNLIRVLGWNNSR 307 (508)
Q Consensus 235 ~~~~~~~~~~~lg~G~~g~V~~~~~~~------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 307 (508)
...++|+..+.||+|+||.||++...+ ...+|+|.+...........+.+|+++++++ +||||+++++++..+
T Consensus 9 ~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 88 (293)
T cd05053 9 LPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQE 88 (293)
T ss_pred cCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCC
Confidence 344678889999999999999998632 3689999997655555667799999999999 799999999999999
Q ss_pred CeeEEEEeecCCCCHHHHhc-----------------cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecC
Q 045127 308 RTRAIVTEWTNGGNVELWLS-----------------ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTD 370 (508)
Q Consensus 308 ~~~~lv~e~~~~gsL~~~l~-----------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~ 370 (508)
...+++|||+++|+|..++. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.
T Consensus 89 ~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~-~ivH~dlkp~Nil~~~ 167 (293)
T cd05053 89 GPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK-KCIHRDLAARNVLVTE 167 (293)
T ss_pred CCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC-CccccccceeeEEEcC
Confidence 99999999999999999985 24578999999999999999999999 9999999999999999
Q ss_pred CCceEEeeccCCC-----------------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHH
Q 045127 371 NLEPLISRFKIEY-----------------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIE 420 (508)
Q Consensus 371 ~~~~kl~Dfg~~~-----------------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~ 420 (508)
++.+|++|||.+. .++.++|||||||++||+++ |..||....... ...
T Consensus 168 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~--~~~ 245 (293)
T cd05053 168 DHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE--LFK 245 (293)
T ss_pred CCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHH--HHH
Confidence 9999999998642 23456899999999999998 999986432111 111
Q ss_pred HHHHhccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHH
Q 045127 421 YIRMHYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAY 480 (508)
Q Consensus 421 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~ 480 (508)
...... ..... ......+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 246 ~~~~~~----------~~~~~---~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 246 LLKEGY----------RMEKP---QNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred HHHcCC----------cCCCC---CCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 111000 00000 122456788999999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, |
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-35 Score=286.75 Aligned_cols=226 Identities=21% Similarity=0.321 Sum_probs=182.8
Q ss_pred hhcCCCCCceeeecCCeEEEEEEEC------CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCe
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGILR------DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRT 309 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 309 (508)
..++|+..+.||+|++|.||+|.+. .+..|++|.+...........+.+|+.++++++|+||+++++++.+...
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLP 83 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC
Confidence 3567889999999999999999974 3568999988755555556779999999999999999999999998888
Q ss_pred eEEEEeecCCCCHHHHhcc--------CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCC---ceEEee
Q 045127 310 RAIVTEWTNGGNVELWLSE--------SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNL---EPLISR 378 (508)
Q Consensus 310 ~~lv~e~~~~gsL~~~l~~--------~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~---~~kl~D 378 (508)
.++||||+++++|.+++.. ..+++..+.+++.||+.||+|||+. +++||||||+||+++.++ .+|++|
T Consensus 84 ~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~-~ivH~dlkp~nil~~~~~~~~~~kl~d 162 (277)
T cd05036 84 RFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN-HFIHRDIAARNCLLTCKGPGRVAKIAD 162 (277)
T ss_pred cEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CEeecccchheEEEeccCCCcceEecc
Confidence 9999999999999999872 2589999999999999999999999 999999999999998654 699999
Q ss_pred ccCCC-----------------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccc
Q 045127 379 FKIEY-----------------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPE 428 (508)
Q Consensus 379 fg~~~-----------------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~ 428 (508)
||++. .++.++|||||||++|||++ |..||....... +...+....
T Consensus 163 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~--~~~~~~~~~-- 238 (277)
T cd05036 163 FGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQE--VMEFVTGGG-- 238 (277)
T ss_pred CccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH--HHHHHHcCC--
Confidence 98742 24567999999999999997 999987432211 111111100
Q ss_pred hhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHH
Q 045127 429 NLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMIT 477 (508)
Q Consensus 429 ~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~ 477 (508)
..... ......+.+++.+|++.+|++|||+.+|++.|+
T Consensus 239 --------~~~~~---~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 239 --------RLDPP---KGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred --------cCCCC---CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 00000 112356788999999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-35 Score=283.05 Aligned_cols=230 Identities=17% Similarity=0.214 Sum_probs=185.5
Q ss_pred cCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCC--CHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEE
Q 045127 238 NGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDV--SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVT 314 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 314 (508)
++|+..+.||+|++|.||+|.. .++..++||.+.... .......+.+|+.+++.++||||+++++++..++..+++|
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 4688889999999999999996 578999999875422 2234568899999999999999999999999999999999
Q ss_pred eecCCCCHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC-------
Q 045127 315 EWTNGGNVELWLS-----ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE------- 382 (508)
Q Consensus 315 e~~~~gsL~~~l~-----~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~------- 382 (508)
||+++++|.+++. ...+++..+..++.|++.||+|||+. |++|+||||+||+++.++.++++|||.+
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~-~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSR-RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT 160 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEEcCCCCEEECcchhhhccccCC
Confidence 9999999999886 35689999999999999999999999 9999999999999999999999999853
Q ss_pred --------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCc
Q 045127 383 --------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTE 442 (508)
Q Consensus 383 --------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 442 (508)
...+.++||||||+++|+|++|..||.....+.....+.+. ....+...
T Consensus 161 ~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--------~~~~~~~~--- 229 (267)
T cd08229 161 TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIE--------QCDYPPLP--- 229 (267)
T ss_pred cccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhh--------cCCCCCCC---
Confidence 12345789999999999999999998643222111111111 00111110
Q ss_pred chHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHH
Q 045127 443 NMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAY 480 (508)
Q Consensus 443 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~ 480 (508)
.......+.+++.+||+.||++|||+.+|++.++++.
T Consensus 230 -~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 230 -SDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred -cccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 0123456778899999999999999999999998764
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-35 Score=283.24 Aligned_cols=221 Identities=22% Similarity=0.348 Sum_probs=178.0
Q ss_pred ceeeecCCeEEEEEEEC-CCC--EEEEEEecCCCCHHHHHHHHHHHHHHhhc-CCCCccceeeEEecCCeeEEEEeecCC
Q 045127 244 NLVGKNEGAAIYKGILR-DGT--RVKIEIYKGDVSREIRDEFVEECKLLVQF-QHKNLIRVLGWNNSRRTRAIVTEWTNG 319 (508)
Q Consensus 244 ~~lg~G~~g~V~~~~~~-~~~--~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~ 319 (508)
+.||+|+||.||+|... ++. .+++|.++..........+.+|++++.++ +||||+++++++......+++|||+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 36899999999999974 343 57888887555555667899999999999 799999999999998899999999999
Q ss_pred CCHHHHhcc-----------------CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC
Q 045127 320 GNVELWLSE-----------------SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE 382 (508)
Q Consensus 320 gsL~~~l~~-----------------~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~ 382 (508)
|+|.+++.. ..+++.++..++.|++.|++|||+. |++||||||+||++++++.+|++|||++
T Consensus 81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~-~i~H~dikp~nili~~~~~~kl~dfgl~ 159 (270)
T cd05047 81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK-QFIHRDLAARNILVGENYVAKIADFGLS 159 (270)
T ss_pred CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC-CEeecccccceEEEcCCCeEEECCCCCc
Confidence 999999862 2478999999999999999999999 9999999999999999999999999974
Q ss_pred C--------------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhh
Q 045127 383 Y--------------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVD 435 (508)
Q Consensus 383 ~--------------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (508)
. .++.++||||||+++|||++ |..||...... ..........
T Consensus 160 ~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~--~~~~~~~~~~--------- 228 (270)
T cd05047 160 RGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA--ELYEKLPQGY--------- 228 (270)
T ss_pred cccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHH--HHHHHHhCCC---------
Confidence 2 23457999999999999997 99999643211 1111111000
Q ss_pred hcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHH
Q 045127 436 ERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAY 480 (508)
Q Consensus 436 ~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~ 480 (508)
..... ......+.+++.+||+.+|.+|||+.++++.|.++.
T Consensus 229 -~~~~~---~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 229 -RLEKP---LNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred -CCCCC---CcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 00000 112346778999999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-35 Score=287.55 Aligned_cols=236 Identities=17% Similarity=0.201 Sum_probs=182.0
Q ss_pred CCCCCceeeecCCeEEEEEEE-----CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecC--CeeE
Q 045127 239 GFSKKNLVGKNEGAAIYKGIL-----RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSR--RTRA 311 (508)
Q Consensus 239 ~~~~~~~lg~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~ 311 (508)
.|++.+.||+|+||.||.+.+ .++..||+|.++..........+.+|++++++++||||+++.+++... ...+
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK 84 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceE
Confidence 467889999999999999984 247889999997665555667899999999999999999999998764 5679
Q ss_pred EEEeecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC------
Q 045127 312 IVTEWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------ 383 (508)
Q Consensus 312 lv~e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------ 383 (508)
+||||+++++|.+++. ...+++.++..++.|++.||+|||++ |++||||||+||+++.++.++|+|||.+.
T Consensus 85 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~-gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~ 163 (284)
T cd05079 85 LIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSR-QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDK 163 (284)
T ss_pred EEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecccchheEEEcCCCCEEECCCccccccccCc
Confidence 9999999999999986 34589999999999999999999999 99999999999999999999999998642
Q ss_pred ------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccc----hhhhhhh
Q 045127 384 ------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPE----NLQLVVD 435 (508)
Q Consensus 384 ------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 435 (508)
.++.++||||||+++|||++++.|........ .........+ .....+.
T Consensus 164 ~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 240 (284)
T cd05079 164 EYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLF---LKMIGPTHGQMTVTRLVRVLE 240 (284)
T ss_pred cceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchh---hhhcccccccccHHHHHHHHH
Confidence 23567999999999999999877653211100 0000000000 0000000
Q ss_pred hcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHH
Q 045127 436 ERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRA 479 (508)
Q Consensus 436 ~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i 479 (508)
.... ..........+.+++.+||+.+|++|||+.++++.++++
T Consensus 241 ~~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 241 EGKR-LPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred cCcc-CCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 0000 000012346788999999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=279.82 Aligned_cols=224 Identities=22% Similarity=0.353 Sum_probs=184.2
Q ss_pred hcCCCCCceeeecCCeEEEEEEECCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEee
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEW 316 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 316 (508)
.++|+..+.||+|+||.||+|... |+.||+|.+..... ..+++.+|+.++++++|+||+++++++......++||||
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 81 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST--AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEY 81 (256)
T ss_pred hhhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh--HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEe
Confidence 357888999999999999999875 78999999975533 467899999999999999999999999988899999999
Q ss_pred cCCCCHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC----------
Q 045127 317 TNGGNVELWLSE---SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY---------- 383 (508)
Q Consensus 317 ~~~gsL~~~l~~---~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~---------- 383 (508)
+++++|.+++.. ..+++..+..++.|++.||.|||++ +++||||||+||+++.++.+||+|||.+.
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~-~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~~~~ 160 (256)
T cd05039 82 MAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEK-NFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDSGK 160 (256)
T ss_pred cCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CccchhcccceEEEeCCCCEEEcccccccccccccccCC
Confidence 999999999972 2689999999999999999999999 99999999999999999999999998632
Q ss_pred --------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHH
Q 045127 384 --------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQA 448 (508)
Q Consensus 384 --------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 448 (508)
.++.++||||||+++||+++ |+.||...... .+...+..... .... ....
T Consensus 161 ~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~~~~~~~~----------~~~~---~~~~ 225 (256)
T cd05039 161 LPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK--DVVPHVEKGYR----------MEAP---EGCP 225 (256)
T ss_pred CcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHH--HHHHHHhcCCC----------CCCc---cCCC
Confidence 23457899999999999997 99998643211 11111111110 0000 1124
Q ss_pred HHHHHHHHhcCCCCCCCCCCHHHHHHHHHHH
Q 045127 449 EQGLGLGLMCTDQPTGKLPSLVQIYNMITRA 479 (508)
Q Consensus 449 ~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i 479 (508)
..+.+++.+||+.+|++|||+.|+++.|+.+
T Consensus 226 ~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 226 PEVYKVMKDCWELDPAKRPTFKQLREQLALI 256 (256)
T ss_pred HHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence 5677899999999999999999999999753
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-35 Score=288.11 Aligned_cols=232 Identities=19% Similarity=0.302 Sum_probs=181.8
Q ss_pred cCCCCCceeeecCCeEEEEEEEC-----------------CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccce
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILR-----------------DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRV 300 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~-----------------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 300 (508)
++|+..+.||+|+||.||++... ++..||+|.++..........+.+|+.++++++|+||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~ 84 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL 84 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence 56889999999999999998642 2346899999765555567789999999999999999999
Q ss_pred eeEEecCCeeEEEEeecCCCCHHHHhcc------------CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEe
Q 045127 301 LGWNNSRRTRAIVTEWTNGGNVELWLSE------------SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLL 368 (508)
Q Consensus 301 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~------------~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll 368 (508)
++++...+..+++|||+++|+|.+++.. ..+++.++..++.|++.||+|||+. |++||||||+||++
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~-~i~H~dlkp~Nili 163 (296)
T cd05095 85 LAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL-NFVHRDLATRNCLV 163 (296)
T ss_pred EEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC-CeecccCChheEEE
Confidence 9999999999999999999999999862 2367788999999999999999999 99999999999999
Q ss_pred cCCCceEEeeccCCC-----------------------------CCCCcchhhHHHHHHHHHHh--CCCCCcccccCccc
Q 045127 369 TDNLEPLISRFKIEY-----------------------------QHRSTKYVYKFGLFLLEMIT--NRRPLEEFERGEAG 417 (508)
Q Consensus 369 ~~~~~~kl~Dfg~~~-----------------------------~~~~~~Dv~SlGvil~ellt--g~~P~~~~~~~~~~ 417 (508)
+.++.++++|||.+. .++.++|||||||++|||++ |..||.......
T Consensus 164 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~-- 241 (296)
T cd05095 164 GKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQ-- 241 (296)
T ss_pred cCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHH--
Confidence 999999999998753 12457899999999999998 778886432211
Q ss_pred HHHHHHHhccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHH
Q 045127 418 FIEYIRMHYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITR 478 (508)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 478 (508)
........+.........+ .. ......+.+++.+||+.||++||++.||.+.|++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~---~~---~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 296 (296)
T cd05095 242 VIENTGEFFRDQGRQVYLP---KP---ALCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE 296 (296)
T ss_pred HHHHHHHHHhhccccccCC---CC---CCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 1111111000000000000 00 1124567889999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-34 Score=281.35 Aligned_cols=224 Identities=18% Similarity=0.338 Sum_probs=179.7
Q ss_pred CCCCceeeecCCeEEEEEEEC-C---CCEEEEEEecCCC-CHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCe-----
Q 045127 240 FSKKNLVGKNEGAAIYKGILR-D---GTRVKIEIYKGDV-SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRT----- 309 (508)
Q Consensus 240 ~~~~~~lg~G~~g~V~~~~~~-~---~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~----- 309 (508)
|+..+.||+|+||.||+|... + +..||+|.++... .......+.+|++.++.++||||+++++++.....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 567789999999999999863 2 3689999987543 33456789999999999999999999998876543
Q ss_pred -eEEEEeecCCCCHHHHhc-------cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccC
Q 045127 310 -RAIVTEWTNGGNVELWLS-------ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKI 381 (508)
Q Consensus 310 -~~lv~e~~~~gsL~~~l~-------~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~ 381 (508)
.+++|||+++|+|..++. ...+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+|||.
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~-~i~H~dlkp~Nil~~~~~~~kl~dfg~ 159 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR-NFIHRDLAARNCMLREDMTVCVADFGL 159 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC-CeeccccchheEEECCCCeEEECCccc
Confidence 799999999999999885 23689999999999999999999999 999999999999999999999999987
Q ss_pred CC-----------------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhh
Q 045127 382 EY-----------------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQ 431 (508)
Q Consensus 382 ~~-----------------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~ 431 (508)
+. .++.++|||||||++|||++ |..||...... .+.++......
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~--~~~~~~~~~~~---- 233 (273)
T cd05035 160 SKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENH--EIYDYLRHGNR---- 233 (273)
T ss_pred eeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCCC----
Confidence 42 23457999999999999999 88998653321 11122111100
Q ss_pred hhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHH
Q 045127 432 LVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRA 479 (508)
Q Consensus 432 ~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i 479 (508)
.... ......+.+++.+||+.||++|||+.|+++.|+++
T Consensus 234 ------~~~~---~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 234 ------LKQP---EDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred ------CCCC---cCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 0000 12345688899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=293.83 Aligned_cols=222 Identities=17% Similarity=0.229 Sum_probs=189.0
Q ss_pred cCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEee
Q 045127 238 NGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEW 316 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 316 (508)
..|+..+.||+|+||.||+|.. ..++.||+|++.-+.......++++|+.++.+++++||.++++.+..+...+++|||
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey 92 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEY 92 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHH
Confidence 4577889999999999999997 578999999998777777788999999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccC-CCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC-------------
Q 045127 317 TNGGNVELWLSES-APSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE------------- 382 (508)
Q Consensus 317 ~~~gsL~~~l~~~-~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~------------- 382 (508)
|.||++.+.++.+ .+++..+.-++++++.||.|||.+ +.+|||||+.||++..+|.+|++|||.+
T Consensus 93 ~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~-~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr~tf 171 (467)
T KOG0201|consen 93 CGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSE-KKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRRKTF 171 (467)
T ss_pred hcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhc-ceecccccccceeEeccCcEEEEecceeeeeechhhccccc
Confidence 9999999999944 448888999999999999999999 9999999999999999999999999873
Q ss_pred --------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHH
Q 045127 383 --------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQA 448 (508)
Q Consensus 383 --------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 448 (508)
..|+.|+||||||++.+||.+|.+|+.+......- -. +..-..|.+.. ...
T Consensus 172 vGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvl------fl----Ipk~~PP~L~~-----~~S 236 (467)
T KOG0201|consen 172 VGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVL------FL----IPKSAPPRLDG-----DFS 236 (467)
T ss_pred cccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEE------Ee----ccCCCCCcccc-----ccC
Confidence 35778999999999999999999999876543210 11 11112222222 235
Q ss_pred HHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 449 EQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 449 ~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
..+.+++..|++.||+.||+|.++++.
T Consensus 237 ~~~kEFV~~CL~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 237 PPFKEFVEACLDKNPEFRPSAKELLKH 263 (467)
T ss_pred HHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence 567788999999999999999999863
|
|
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-35 Score=282.20 Aligned_cols=226 Identities=23% Similarity=0.385 Sum_probs=184.7
Q ss_pred cCCCCCceeeecCCeEEEEEEEC-C---CCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEE
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILR-D---GTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIV 313 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~-~---~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 313 (508)
++|+..+.||+|+||.||+|... + +..+|+|.++........+.+.+|+.++++++||||+++++++..++..++|
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV 83 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence 56888899999999999999863 2 3479999987655555677899999999999999999999999998999999
Q ss_pred EeecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC--------
Q 045127 314 TEWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY-------- 383 (508)
Q Consensus 314 ~e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~-------- 383 (508)
|||+++++|.+++. ...+++.++..++.|++.||+|||+. +++||||||+||+++.++.++++|||.+.
T Consensus 84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~-~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~ 162 (267)
T cd05066 84 TEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDM-GYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEA 162 (267)
T ss_pred EEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CEeehhhchhcEEECCCCeEEeCCCCcccccccccce
Confidence 99999999999997 34689999999999999999999999 99999999999999999999999998531
Q ss_pred ----------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhcccC
Q 045127 384 ----------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMML 440 (508)
Q Consensus 384 ----------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 440 (508)
.++.++||||||+++||+++ |..||...... .....+..... ...
T Consensus 163 ~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~--~~~~~~~~~~~----------~~~ 230 (267)
T cd05066 163 AYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQ--DVIKAIEEGYR----------LPA 230 (267)
T ss_pred eeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHH--HHHHHHhCCCc----------CCC
Confidence 23557899999999999886 99998753321 12222211110 000
Q ss_pred CcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHH
Q 045127 441 TENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRA 479 (508)
Q Consensus 441 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i 479 (508)
. ......+.+++.+|++.+|.+||++.++++.|+++
T Consensus 231 ~---~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 231 P---MDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred C---CCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 0 11234567899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-35 Score=283.64 Aligned_cols=222 Identities=17% Similarity=0.260 Sum_probs=172.8
Q ss_pred ceeeecCCeEEEEEEECC---CCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEeecCCC
Q 045127 244 NLVGKNEGAAIYKGILRD---GTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWTNGG 320 (508)
Q Consensus 244 ~~lg~G~~g~V~~~~~~~---~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 320 (508)
+.||+|+||.||+|.+.+ +..+|+|.++..........+.+|+.++++++||||+++++++.+....++||||+++|
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG 80 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence 368999999999998643 46799999876555545668899999999999999999999999888899999999999
Q ss_pred CHHHHhcc------CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-----------
Q 045127 321 NVELWLSE------SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY----------- 383 (508)
Q Consensus 321 sL~~~l~~------~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~----------- 383 (508)
+|.+++.. ...++..+..++.|++.|++|||+. +++||||||+||+++.++.+|++|||.+.
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~ 159 (269)
T cd05087 81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN-NFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVTP 159 (269)
T ss_pred cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC-CEeccccCcceEEEcCCCcEEECCccccccccCcceeecC
Confidence 99999862 2456778889999999999999999 99999999999999999999999998642
Q ss_pred -------------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhc
Q 045127 384 -------------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDER 437 (508)
Q Consensus 384 -------------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (508)
.++.++||||||+++|||++ |+.||....... ...+. .........++.
T Consensus 160 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~--~~~~~---~~~~~~~~~~~~ 234 (269)
T cd05087 160 DQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQ--VLTYT---VREQQLKLPKPR 234 (269)
T ss_pred CCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHH--HHHHH---hhcccCCCCCCc
Confidence 12568999999999999996 999997543221 11111 111111111121
Q ss_pred ccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHH
Q 045127 438 MMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMIT 477 (508)
Q Consensus 438 l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~ 477 (508)
+.. .....+.+++..|| .+|++|||++||++.|+
T Consensus 235 ~~~-----~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 235 LKL-----PLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred cCC-----CCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 111 11334566888898 68999999999998875
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-35 Score=277.84 Aligned_cols=234 Identities=14% Similarity=0.149 Sum_probs=181.3
Q ss_pred HhhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHH-HHHHHHHHHHHhhcCCCCccceeeEEecC--Cee
Q 045127 235 AATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREI-RDEFVEECKLLVQFQHKNLIRVLGWNNSR--RTR 310 (508)
Q Consensus 235 ~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~ 310 (508)
+..++|+..+.|++|+||.||+|+. ++++.||+|+++.+..... .-.-.+|+.+|.+++|||||.+-.+.... +.+
T Consensus 73 rsv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~i 152 (419)
T KOG0663|consen 73 RSVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKI 152 (419)
T ss_pred ccHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEecccccee
Confidence 4556788899999999999999997 5789999999975543321 23457999999999999999999887643 578
Q ss_pred EEEEeecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-----
Q 045127 311 AIVTEWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY----- 383 (508)
Q Consensus 311 ~lv~e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~----- 383 (508)
|||||||+. +|..+++ ..++...++..++.|+++|++|||.+ .|+||||||+|+|+...|.+||+|||+++
T Consensus 153 y~VMe~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~-wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp 230 (419)
T KOG0663|consen 153 YIVMEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDN-WILHRDLKTSNLLLSHKGILKIADFGLAREYGSP 230 (419)
T ss_pred eeeHHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhc-eeEecccchhheeeccCCcEEecccchhhhhcCC
Confidence 999999987 8999998 67899999999999999999999999 99999999999999999999999999864
Q ss_pred -----------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHH-hccch----------
Q 045127 384 -----------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRM-HYPEN---------- 429 (508)
Q Consensus 384 -----------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~-~~~~~---------- 429 (508)
.|+++.|+||+|||+.|++++++-|.+.+.-+ ++...+.. ..+..
T Consensus 231 ~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~d-Ql~~If~llGtPte~iwpg~~~lp 309 (419)
T KOG0663|consen 231 LKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEID-QLDKIFKLLGTPSEAIWPGYSELP 309 (419)
T ss_pred cccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHH-HHHHHHHHhCCCccccCCCccccc
Confidence 45678899999999999999999987544222 12221111 11110
Q ss_pred ----------hhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 430 ----------LQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 430 ----------~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
....+.+.+... .-...-.++....+..||.+|.|++|.++.
T Consensus 310 ~~k~~~f~~~pyn~lr~kF~~~----~lse~g~~Lln~llt~dP~kR~tA~~~L~h 361 (419)
T KOG0663|consen 310 AVKKMTFSEHPYNNLRKKFGAL----SLSEQGFDLLNKLLTYDPGKRITAEDGLKH 361 (419)
T ss_pred hhhccccCCCCchhhhhhcccc----ccchhHHHHHHHHhccCccccccHHHhhcc
Confidence 011111111000 012455677778889999999999999874
|
|
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-35 Score=281.06 Aligned_cols=218 Identities=19% Similarity=0.331 Sum_probs=176.5
Q ss_pred eeeecCCeEEEEEEEC---CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEeecCCCC
Q 045127 245 LVGKNEGAAIYKGILR---DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWTNGGN 321 (508)
Q Consensus 245 ~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gs 321 (508)
.||+|+||.||+|.+. .+..||+|++.........+.+.+|+.++++++||||+++++++.. +..++||||+++++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~-~~~~lv~e~~~~~~ 80 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA-EALMLVMEMASGGP 80 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC-CCeEEEEEeCCCCC
Confidence 3899999999999863 3557999999766555556789999999999999999999998764 56799999999999
Q ss_pred HHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC----------------
Q 045127 322 VELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY---------------- 383 (508)
Q Consensus 322 L~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~---------------- 383 (508)
|.+++. ...+++..+.+++.|++.||+|||++ |++||||||+||+++.++.+|++|||.+.
T Consensus 81 L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~ 159 (257)
T cd05115 81 LNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGK-NFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAGK 159 (257)
T ss_pred HHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhc-CeeecccchheEEEcCCCcEEeccCCccccccCCccceeccCCCC
Confidence 999986 55789999999999999999999999 99999999999999999999999998642
Q ss_pred --------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHH
Q 045127 384 --------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQA 448 (508)
Q Consensus 384 --------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 448 (508)
.++.++|||||||++||+++ |..||....... ....+..... .... ....
T Consensus 160 ~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~--~~~~~~~~~~----------~~~~---~~~~ 224 (257)
T cd05115 160 WPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPE--VMSFIEQGKR----------LDCP---AECP 224 (257)
T ss_pred CCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHH--HHHHHHCCCC----------CCCC---CCCC
Confidence 22457899999999999996 999997543211 1111111110 0000 1124
Q ss_pred HHHHHHHHhcCCCCCCCCCCHHHHHHHHHHH
Q 045127 449 EQGLGLGLMCTDQPTGKLPSLVQIYNMITRA 479 (508)
Q Consensus 449 ~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i 479 (508)
..+.+++.+||..+|++||++.+|.+.|+.+
T Consensus 225 ~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 225 PEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 5677899999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-35 Score=283.54 Aligned_cols=226 Identities=24% Similarity=0.397 Sum_probs=184.7
Q ss_pred cCCCCCceeeecCCeEEEEEEEC-CC---CEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEE
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILR-DG---TRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIV 313 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~-~~---~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 313 (508)
++|+..+.||+|+||.||+|... ++ ..||+|.+..........+|..|+.++++++||||+++++++..+...++|
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv 83 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMII 83 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEE
Confidence 35778899999999999999974 23 369999997655565678899999999999999999999999999999999
Q ss_pred EeecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC--------
Q 045127 314 TEWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY-------- 383 (508)
Q Consensus 314 ~e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~-------- 383 (508)
|||+++++|.+++. ...+++.++..++.|++.||+|||++ |++||||||+||+++.++.+|++|||.+.
T Consensus 84 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~-g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~ 162 (269)
T cd05065 84 TEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEM-NYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSD 162 (269)
T ss_pred EecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHC-CEeecccChheEEEcCCCcEEECCCccccccccCccc
Confidence 99999999999987 45689999999999999999999999 99999999999999999999999998531
Q ss_pred ------------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhcc
Q 045127 384 ------------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERM 438 (508)
Q Consensus 384 ------------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 438 (508)
.++.++|||||||++||+++ |..||...... ....++.... ..
T Consensus 163 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~--~~~~~i~~~~----------~~ 230 (269)
T cd05065 163 PTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ--DVINAIEQDY----------RL 230 (269)
T ss_pred cccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHH--HHHHHHHcCC----------cC
Confidence 22457899999999999886 99998643221 1222221111 00
Q ss_pred cCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHH
Q 045127 439 MLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRA 479 (508)
Q Consensus 439 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i 479 (508)
... .+....+.+++.+||+.+|++||++.+|++.|+++
T Consensus 231 ~~~---~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 231 PPP---MDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred CCc---ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 000 12234567899999999999999999999998865
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=282.09 Aligned_cols=224 Identities=18% Similarity=0.329 Sum_probs=176.0
Q ss_pred CCCCceeeecCCeEEEEEEECC-CC--EEEEEEecCCC-CHHHHHHHHHHHHHHhhcCCCCccceeeEEecC------Ce
Q 045127 240 FSKKNLVGKNEGAAIYKGILRD-GT--RVKIEIYKGDV-SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSR------RT 309 (508)
Q Consensus 240 ~~~~~~lg~G~~g~V~~~~~~~-~~--~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------~~ 309 (508)
|...+.||+|+||.||+|.+.+ +. .||+|.++... .....+.+.+|+.+++.++||||+++++++... ..
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 3466889999999999999743 33 68999986542 344567889999999999999999999987532 24
Q ss_pred eEEEEeecCCCCHHHHhc-------cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC
Q 045127 310 RAIVTEWTNGGNVELWLS-------ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE 382 (508)
Q Consensus 310 ~~lv~e~~~~gsL~~~l~-------~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~ 382 (508)
.+++|||+++|+|.+++. ...+++..+..++.|++.||+|||++ +|+||||||+||++++++.+||+|||.+
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 159 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK-SFIHRDLAARNCMLNENMNVCVADFGLS 159 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC-CeeccccchhheEEcCCCCEEECCCCcc
Confidence 689999999999998874 23478999999999999999999999 9999999999999999999999999874
Q ss_pred CC-----------------------------CCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhh
Q 045127 383 YQ-----------------------------HRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQL 432 (508)
Q Consensus 383 ~~-----------------------------~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (508)
.. ++.++||||||+++|||++ |+.||...... .+...+....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~~~~~~~~~------ 231 (272)
T cd05075 160 KKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENS--EIYDYLRQGN------ 231 (272)
T ss_pred cccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHHcCC------
Confidence 21 3457999999999999999 88998643211 1111111100
Q ss_pred hhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHH
Q 045127 433 VVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRA 479 (508)
Q Consensus 433 ~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i 479 (508)
..... ......+.+++.+||+.||++|||+.|+++.|+++
T Consensus 232 ----~~~~~---~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 232 ----RLKQP---PDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred ----CCCCC---CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 00001 11234578899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-35 Score=284.42 Aligned_cols=226 Identities=15% Similarity=0.192 Sum_probs=180.7
Q ss_pred cCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEee
Q 045127 238 NGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEW 316 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 316 (508)
++|+..+.||+|+||.||+|.. .+++.||+|++..... .....+.+|+.++++++||||+++++++..++..++||||
T Consensus 9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~-~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~ 87 (267)
T cd06646 9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPG-DDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEY 87 (267)
T ss_pred hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCcc-chHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeC
Confidence 5789999999999999999997 5688999999964432 2345688999999999999999999999999999999999
Q ss_pred cCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC------------
Q 045127 317 TNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------------ 383 (508)
Q Consensus 317 ~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------------ 383 (508)
+++++|.+++. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||.+.
T Consensus 88 ~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~ 166 (267)
T cd06646 88 CGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSK-GKMHRDIKGANILLTDNGDVKLADFGVAAKITATIAKRKSF 166 (267)
T ss_pred CCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCHHHEEECCCCCEEECcCccceeecccccccCcc
Confidence 99999999886 56789999999999999999999999 99999999999999999999999998531
Q ss_pred ------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchH
Q 045127 384 ------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMF 445 (508)
Q Consensus 384 ------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 445 (508)
.++.++|||||||++|||++|+.||........ ........ ...+.... ..
T Consensus 167 ~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~-~~~~~~~~-------~~~~~~~~---~~ 235 (267)
T cd06646 167 IGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRA-LFLMSKSN-------FQPPKLKD---KT 235 (267)
T ss_pred ccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhh-heeeecCC-------CCCCCCcc---cc
Confidence 123468999999999999999999864321110 00000000 00011100 01
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCHHHHHHHH
Q 045127 446 DQAEQGLGLGLMCTDQPTGKLPSLVQIYNMI 476 (508)
Q Consensus 446 ~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L 476 (508)
.....+.+++.+||+.+|++|||++++++.+
T Consensus 236 ~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 236 KWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred ccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 1245678899999999999999999998753
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-35 Score=292.80 Aligned_cols=212 Identities=16% Similarity=0.121 Sum_probs=171.7
Q ss_pred eeecCCeEEEEEEEC-CCCEEEEEEecCCC--CHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEeecCCCCH
Q 045127 246 VGKNEGAAIYKGILR-DGTRVKIEIYKGDV--SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWTNGGNV 322 (508)
Q Consensus 246 lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 322 (508)
||+|+||.||+|... +++.||+|++.... .......+.+|+.++++++||||+++++++..++..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 699999999999974 58899999986432 233456788999999999999999999999999999999999999999
Q ss_pred HHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC------------------
Q 045127 323 ELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------------------ 383 (508)
Q Consensus 323 ~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------------------ 383 (508)
.+++. ...+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++.
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y 159 (312)
T cd05585 81 FHHLQREGRFDLSRARFYTAELLCALENLHKF-NVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFCGTPEY 159 (312)
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC-CeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCccccccCCccc
Confidence 99987 56789999999999999999999999 99999999999999999999999998642
Q ss_pred ---------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHHHHHHHH
Q 045127 384 ---------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQAEQGLGL 454 (508)
Q Consensus 384 ---------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l 454 (508)
.++.++|||||||++|||++|+.||.... ..+....... ....... .....+.++
T Consensus 160 ~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~-----~~~~~~~~~~--------~~~~~~~---~~~~~~~~l 223 (312)
T cd05585 160 LAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDEN-----VNEMYRKILQ--------EPLRFPD---GFDRDAKDL 223 (312)
T ss_pred CCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCC-----HHHHHHHHHc--------CCCCCCC---cCCHHHHHH
Confidence 24567999999999999999999997432 1111211111 1111111 123456788
Q ss_pred HHhcCCCCCCCCCC---HHHHHH
Q 045127 455 GLMCTDQPTGKLPS---LVQIYN 474 (508)
Q Consensus 455 ~~~Cl~~dP~~RPs---~~evl~ 474 (508)
+.+||+.||.+||+ +.|+++
T Consensus 224 i~~~L~~dp~~R~~~~~~~e~l~ 246 (312)
T cd05585 224 LIGLLSRDPTRRLGYNGAQEIKN 246 (312)
T ss_pred HHHHcCCCHHHcCCCCCHHHHHc
Confidence 89999999999975 666664
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-35 Score=286.00 Aligned_cols=236 Identities=17% Similarity=0.206 Sum_probs=181.3
Q ss_pred cCCCCCceeeecCCeEEEEEEE-----CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEec--CCee
Q 045127 238 NGFSKKNLVGKNEGAAIYKGIL-----RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNS--RRTR 310 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~~ 310 (508)
.+|+..+.||+|+||.||+|.. .++..||+|.+... .....+.+.+|++++++++||||+++++++.. ....
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 82 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHS-TAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 82 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccC-CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCce
Confidence 4788889999999999999975 25789999998644 33456788999999999999999999998754 3467
Q ss_pred EEEEeecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-----
Q 045127 311 AIVTEWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY----- 383 (508)
Q Consensus 311 ~lv~e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~----- 383 (508)
++||||+++|+|.+++. ...+++..+..++.|++.||+|||++ |++||||||+||++++++.+||+|||++.
T Consensus 83 ~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~-~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~ 161 (284)
T cd05081 83 RLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSK-RYVHRDLATRNILVESENRVKIGDFGLTKVLPQD 161 (284)
T ss_pred EEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCCHhhEEECCCCeEEECCCcccccccCC
Confidence 89999999999999987 34689999999999999999999999 99999999999999999999999998643
Q ss_pred -------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhcc-----chhhhh
Q 045127 384 -------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYP-----ENLQLV 433 (508)
Q Consensus 384 -------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~-----~~~~~~ 433 (508)
.++.++||||||+++|||++|..|+...... +......... ..+.+.
T Consensus 162 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 238 (284)
T cd05081 162 KEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAE---FMRMMGNDKQGQMIVYHLIEL 238 (284)
T ss_pred CcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchh---hhhhcccccccccchHHHHHH
Confidence 2345689999999999999988775432110 0000000000 001111
Q ss_pred hhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHH
Q 045127 434 VDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRA 479 (508)
Q Consensus 434 ~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i 479 (508)
+..... ..........+.+++.+||+.+|++|||+.||++.|+.+
T Consensus 239 ~~~~~~-~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 239 LKNNGR-LPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred HhcCCc-CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 111110 000112245688899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-36 Score=267.11 Aligned_cols=224 Identities=13% Similarity=0.186 Sum_probs=185.3
Q ss_pred hhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCC--HHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEE
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVS--REIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAI 312 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 312 (508)
+.++|++++.||+|.||.||.|+. +++-.||+|++....- .....++.+|+++-+.++||||+++++++.+....|+
T Consensus 20 ~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyL 99 (281)
T KOG0580|consen 20 TLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYL 99 (281)
T ss_pred chhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEE
Confidence 346799999999999999999996 5678999999853321 1235778999999999999999999999999999999
Q ss_pred EEeecCCCCHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC-------
Q 045127 313 VTEWTNGGNVELWLS---ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE------- 382 (508)
Q Consensus 313 v~e~~~~gsL~~~l~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~------- 382 (508)
++||.++|++...+. ..++++.....++.|+|.||.|+|.+ +|+||||||+|+|++..+..|++|||.+
T Consensus 100 ilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k-~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~~k 178 (281)
T KOG0580|consen 100 ILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSNK 178 (281)
T ss_pred EEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccC-CcccCCCCHHHhccCCCCCeeccCCCceeecCCCC
Confidence 999999999999998 45688999999999999999999999 9999999999999999999999999863
Q ss_pred ------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcch
Q 045127 383 ------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENM 444 (508)
Q Consensus 383 ------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 444 (508)
...+...|+|++|++.||++.|.+||+....++ .+ ..+..-.+..+.
T Consensus 179 R~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~e-tY------------krI~k~~~~~p~-- 243 (281)
T KOG0580|consen 179 RKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSE-TY------------KRIRKVDLKFPS-- 243 (281)
T ss_pred ceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHH-HH------------HHHHHccccCCc--
Confidence 345678899999999999999999998654221 11 111111111111
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHH
Q 045127 445 FDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMI 476 (508)
Q Consensus 445 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L 476 (508)
.......+++.+|+..+|.+|.+..|+++.-
T Consensus 244 -~is~~a~dlI~~ll~~~p~~r~~l~~v~~hp 274 (281)
T KOG0580|consen 244 -TISGGAADLISRLLVKNPIERLALTEVMDHP 274 (281)
T ss_pred -ccChhHHHHHHHHhccCccccccHHHHhhhH
Confidence 1244567888999999999999999998753
|
|
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-35 Score=292.78 Aligned_cols=215 Identities=16% Similarity=0.185 Sum_probs=173.9
Q ss_pred ceeeecCCeEEEEEEE-CCCCEEEEEEecCCC--CHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEeecCCC
Q 045127 244 NLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDV--SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWTNGG 320 (508)
Q Consensus 244 ~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 320 (508)
+.||+|+||.||++.. .+|..||+|+++... .......+.+|+.+++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 4699999999999997 468999999996432 2234567788999999999999999999999999999999999999
Q ss_pred CHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC----------------
Q 045127 321 NVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY---------------- 383 (508)
Q Consensus 321 sL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~---------------- 383 (508)
+|..++. ...+++..+..++.|++.||+|||++ ||+||||||+|||++.++.+||+|||++.
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~ 159 (323)
T cd05595 81 ELFFHLSRERVFTEERARFYGAEIVSALEYLHSR-DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTP 159 (323)
T ss_pred cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCccccccCCc
Confidence 9998887 56789999999999999999999999 99999999999999999999999998531
Q ss_pred -----------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHHHHHH
Q 045127 384 -----------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQAEQGL 452 (508)
Q Consensus 384 -----------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~ 452 (508)
.++.++|||||||++|||++|+.||....... . ..... ........ .....+.
T Consensus 160 ~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~--~---~~~~~--------~~~~~~p~---~~~~~~~ 223 (323)
T cd05595 160 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER--L---FELIL--------MEEIRFPR---TLSPEAK 223 (323)
T ss_pred CcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHH--H---HHHHh--------cCCCCCCC---CCCHHHH
Confidence 23567899999999999999999996432111 1 11111 01110000 1234567
Q ss_pred HHHHhcCCCCCCCCC-----CHHHHHHH
Q 045127 453 GLGLMCTDQPTGKLP-----SLVQIYNM 475 (508)
Q Consensus 453 ~l~~~Cl~~dP~~RP-----s~~evl~~ 475 (508)
+++.+||+.||++|| ++.++++.
T Consensus 224 ~li~~~L~~dP~~R~~~~~~~~~~~l~h 251 (323)
T cd05595 224 SLLAGLLKKDPKQRLGGGPSDAKEVMEH 251 (323)
T ss_pred HHHHHHccCCHHHhCCCCCCCHHHHHcC
Confidence 888999999999998 88888763
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-34 Score=278.66 Aligned_cols=220 Identities=19% Similarity=0.276 Sum_probs=178.5
Q ss_pred ceeeecCCeEEEEEEEC--C--CCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEeecCC
Q 045127 244 NLVGKNEGAAIYKGILR--D--GTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWTNG 319 (508)
Q Consensus 244 ~~lg~G~~g~V~~~~~~--~--~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 319 (508)
++||+|+||.||+|.+. + +..+|+|.+.........+++.+|+++++++.||||+++++++.. ...++||||+++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCKG-EPLMLVMELAPL 79 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcC-CceEEEEEeCCC
Confidence 46999999999999862 2 268999999766554456789999999999999999999998764 467999999999
Q ss_pred CCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC---------------
Q 045127 320 GNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY--------------- 383 (508)
Q Consensus 320 gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~--------------- 383 (508)
|+|.+++. ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||.+.
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~-~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~~~ 158 (257)
T cd05060 80 GPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESK-HFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTAG 158 (257)
T ss_pred CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhc-CeeccCcccceEEEcCCCcEEeccccccceeecCCcccccccCc
Confidence 99999997 44689999999999999999999999 99999999999999999999999997632
Q ss_pred ---------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHH
Q 045127 384 ---------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQ 447 (508)
Q Consensus 384 ---------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 447 (508)
.++.++||||||+++||+++ |..||..... ..+..++....+. ... ...
T Consensus 159 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~--~~~~~~~~~~~~~----------~~~---~~~ 223 (257)
T cd05060 159 RWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKG--AEVIAMLESGERL----------PRP---EEC 223 (257)
T ss_pred cccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCH--HHHHHHHHcCCcC----------CCC---CCC
Confidence 23457999999999999998 9999975422 1222222211100 000 112
Q ss_pred HHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHH
Q 045127 448 AEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAY 480 (508)
Q Consensus 448 ~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~ 480 (508)
...+.+++.+||+.+|++||++.++++.|+++.
T Consensus 224 ~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 224 PQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred CHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence 356778999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-34 Score=287.41 Aligned_cols=231 Identities=18% Similarity=0.262 Sum_probs=186.6
Q ss_pred hcCCCCCceeeecCCeEEEEEEEC--------CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhc-CCCCccceeeEEecC
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGILR--------DGTRVKIEIYKGDVSREIRDEFVEECKLLVQF-QHKNLIRVLGWNNSR 307 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 307 (508)
.++|...+.||+|+||.||+|... +...+|+|.+...........+.+|+.+++++ +||||+++++++...
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 96 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 96 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC
Confidence 367899999999999999999852 13569999997655455567788999999999 799999999999999
Q ss_pred CeeEEEEeecCCCCHHHHhcc-----------------CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecC
Q 045127 308 RTRAIVTEWTNGGNVELWLSE-----------------SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTD 370 (508)
Q Consensus 308 ~~~~lv~e~~~~gsL~~~l~~-----------------~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~ 370 (508)
...++||||+++|+|.+++.. ..+++.++.+++.|++.||+|||+. |++||||||+||+++.
T Consensus 97 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~-gi~H~dlkp~Nill~~ 175 (307)
T cd05098 97 GPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK-KCIHRDLAARNVLVTE 175 (307)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC-CcccccccHHheEEcC
Confidence 999999999999999999962 2478999999999999999999999 9999999999999999
Q ss_pred CCceEEeeccCCC-----------------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHH
Q 045127 371 NLEPLISRFKIEY-----------------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIE 420 (508)
Q Consensus 371 ~~~~kl~Dfg~~~-----------------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~ 420 (508)
++.+||+|||.+. .++.++|||||||++|||++ |..||..... ..+..
T Consensus 176 ~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~--~~~~~ 253 (307)
T cd05098 176 DNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV--EELFK 253 (307)
T ss_pred CCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCH--HHHHH
Confidence 9999999998642 23457899999999999998 8888863221 11111
Q ss_pred HHHHhccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhC
Q 045127 421 YIRMHYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSC 483 (508)
Q Consensus 421 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 483 (508)
...... ..... ......+.+++.+||+.+|++|||+.||++.|+++.+..
T Consensus 254 ~~~~~~----------~~~~~---~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~~ 303 (307)
T cd05098 254 LLKEGH----------RMDKP---SNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILALT 303 (307)
T ss_pred HHHcCC----------CCCCC---CcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHHh
Confidence 111100 00001 122456778999999999999999999999999988763
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-35 Score=287.78 Aligned_cols=231 Identities=19% Similarity=0.279 Sum_probs=185.9
Q ss_pred hhcCCCCCceeeecCCeEEEEEEEC--------CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhc-CCCCccceeeEEec
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGILR--------DGTRVKIEIYKGDVSREIRDEFVEECKLLVQF-QHKNLIRVLGWNNS 306 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~ 306 (508)
..++|...+.||+|+||.||+|... ++..||+|.+.........+.+.+|+.+++.+ +||||+++++++..
T Consensus 13 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~ 92 (304)
T cd05101 13 SRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 92 (304)
T ss_pred cHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEec
Confidence 3467888899999999999999741 24579999987655555677899999999999 79999999999999
Q ss_pred CCeeEEEEeecCCCCHHHHhcc-----------------CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEec
Q 045127 307 RRTRAIVTEWTNGGNVELWLSE-----------------SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLT 369 (508)
Q Consensus 307 ~~~~~lv~e~~~~gsL~~~l~~-----------------~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~ 369 (508)
....+++|||+++|+|.+++.. ..+++.++..++.||++||+|||++ |++||||||+||+++
T Consensus 93 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~-givH~dlkp~Nili~ 171 (304)
T cd05101 93 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ-KCIHRDLAARNVLVT 171 (304)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC-CeeecccccceEEEc
Confidence 9999999999999999999862 2478889999999999999999999 999999999999999
Q ss_pred CCCceEEeeccCCC-----------------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHH
Q 045127 370 DNLEPLISRFKIEY-----------------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFI 419 (508)
Q Consensus 370 ~~~~~kl~Dfg~~~-----------------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~ 419 (508)
+++.+||+|||.+. .++.++||||||+++||+++ |..||..... .
T Consensus 172 ~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~-----~ 246 (304)
T cd05101 172 ENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV-----E 246 (304)
T ss_pred CCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH-----H
Confidence 99999999998632 23567999999999999998 7888864321 1
Q ss_pred HHHHHhccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhh
Q 045127 420 EYIRMHYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKS 482 (508)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 482 (508)
+...... .. ...... ......+.+++.+||+.+|++|||+.|+++.|+++...
T Consensus 247 ~~~~~~~-~~------~~~~~~---~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~ 299 (304)
T cd05101 247 ELFKLLK-EG------HRMDKP---ANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTL 299 (304)
T ss_pred HHHHHHH-cC------CcCCCC---CCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHh
Confidence 1111110 00 000000 12245677899999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=286.06 Aligned_cols=232 Identities=19% Similarity=0.299 Sum_probs=184.3
Q ss_pred hcCCCCCceeeecCCeEEEEEEECC-----------------CCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccc
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGILRD-----------------GTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIR 299 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~~~-----------------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 299 (508)
.++|+..+.||+|+||.||+|...+ +..||+|.+.........+.+.+|++++++++||||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 4578899999999999999998632 24689999976666666788999999999999999999
Q ss_pred eeeEEecCCeeEEEEeecCCCCHHHHhccC------------CCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEE
Q 045127 300 VLGWNNSRRTRAIVTEWTNGGNVELWLSES------------APSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVL 367 (508)
Q Consensus 300 ~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~------------~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIl 367 (508)
+++++..++..+++|||+++++|.+++... .+++..+..++.|++.||+|||+. +++||||||+||+
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~-~i~H~dlkp~Nil 162 (296)
T cd05051 84 LLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL-NFVHRDLATRNCL 162 (296)
T ss_pred EEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc-Cccccccchhcee
Confidence 999999989999999999999999998722 589999999999999999999999 9999999999999
Q ss_pred ecCCCceEEeeccCCC-----------------------------CCCCcchhhHHHHHHHHHHh--CCCCCcccccCcc
Q 045127 368 LTDNLEPLISRFKIEY-----------------------------QHRSTKYVYKFGLFLLEMIT--NRRPLEEFERGEA 416 (508)
Q Consensus 368 l~~~~~~kl~Dfg~~~-----------------------------~~~~~~Dv~SlGvil~ellt--g~~P~~~~~~~~~ 416 (508)
++.++.++++|||.+. .++.++|||||||++|||++ |..||......
T Consensus 163 i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~-- 240 (296)
T cd05051 163 VGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQ-- 240 (296)
T ss_pred ecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChH--
Confidence 9999999999998642 33567999999999999998 67787643211
Q ss_pred cHHHHHHHhccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHH
Q 045127 417 GFIEYIRMHYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMIT 477 (508)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~ 477 (508)
.........+...-.... ... ......++.+++.+|++.||++|||+.||++.|+
T Consensus 241 ~~~~~~~~~~~~~~~~~~---~~~---~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 241 QVIENAGHFFRDDGRQIY---LPR---PPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred HHHHHHHhcccccccccc---CCC---ccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 111111111110000000 000 0112357889999999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-35 Score=294.66 Aligned_cols=223 Identities=15% Similarity=0.118 Sum_probs=179.6
Q ss_pred hhcCCCCCceeeecCCeEEEEEEECC--CCEEEEEEecCCC--CHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeE
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGILRD--GTRVKIEIYKGDV--SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRA 311 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~~~--~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 311 (508)
..++|+..+.||+|+||.||+|.+.+ +..||+|.+.... .....+.+.+|+.+++.++||||+++++++.++...+
T Consensus 28 ~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~ 107 (340)
T PTZ00426 28 KYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLY 107 (340)
T ss_pred ChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEE
Confidence 34578899999999999999998643 3689999985322 2234567889999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-------
Q 045127 312 IVTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------- 383 (508)
Q Consensus 312 lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------- 383 (508)
+||||+++|+|.+++. ...+++..+..++.|++.||+|||+. ||+||||||+|||++.++.+||+|||++.
T Consensus 108 lv~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~~~ 186 (340)
T PTZ00426 108 LVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSL-NIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTRTY 186 (340)
T ss_pred EEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEccCCCHHHEEECCCCCEEEecCCCCeecCCCcc
Confidence 9999999999999997 56789999999999999999999999 99999999999999999999999999752
Q ss_pred -----------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHH
Q 045127 384 -----------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFD 446 (508)
Q Consensus 384 -----------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 446 (508)
.++.++|||||||++|||++|+.||...... .. .... .......+. .
T Consensus 187 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~--~~---~~~i--------~~~~~~~p~---~ 250 (340)
T PTZ00426 187 TLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPL--LI---YQKI--------LEGIIYFPK---F 250 (340)
T ss_pred eecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHH--HH---HHHH--------hcCCCCCCC---C
Confidence 2456899999999999999999999743211 01 1111 111110011 1
Q ss_pred HHHHHHHHHHhcCCCCCCCCC-----CHHHHHHH
Q 045127 447 QAEQGLGLGLMCTDQPTGKLP-----SLVQIYNM 475 (508)
Q Consensus 447 ~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~ 475 (508)
....+.+++.+|++.||.+|+ +++|+++.
T Consensus 251 ~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 251 LDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred CCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence 123456788999999999995 89998765
|
|
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-34 Score=282.84 Aligned_cols=225 Identities=14% Similarity=0.263 Sum_probs=180.0
Q ss_pred cCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEee
Q 045127 238 NGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEW 316 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 316 (508)
++|+..+.||+|+||.||+|.. .+++.||+|.+...........+.+|++++++++||||+++++++...+..++||||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 80 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEF 80 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEec
Confidence 3677889999999999999986 568999999987654555567899999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-------------
Q 045127 317 TNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------------- 383 (508)
Q Consensus 317 ~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------------- 383 (508)
+++++|..+ ..+++..+..++.|++.||+|||+. ||+|+||||+||+++.++.++|+|||++.
T Consensus 81 ~~~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 156 (279)
T cd06619 81 MDGGSLDVY---RKIPEHVLGRIAVAVVKGLTYLWSL-KILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSIAKTYVGT 156 (279)
T ss_pred CCCCChHHh---hcCCHHHHHHHHHHHHHHHHHHHHC-CEeeCCCCHHHEEECCCCCEEEeeCCcceecccccccCCCCC
Confidence 999999765 3578889999999999999999999 99999999999999999999999998642
Q ss_pred ------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccH--HHHHHHhccchhhhhhhhcccCCcchHHHHH
Q 045127 384 ------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGF--IEYIRMHYPENLQLVVDERMMLTENMFDQAE 449 (508)
Q Consensus 384 ------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 449 (508)
.++.++||||||+++|+|++|+.||.......... ........ ....+.+.. .....
T Consensus 157 ~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~----~~~~~ 227 (279)
T cd06619 157 NAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIV-----DEDPPVLPV----GQFSE 227 (279)
T ss_pred hhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHh-----ccCCCCCCC----CcCCH
Confidence 24567999999999999999999997543221110 01100000 000111110 11234
Q ss_pred HHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 450 QGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 450 ~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
.+.+++.+|++.+|++||+++|+++.
T Consensus 228 ~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 228 KFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred HHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 57789999999999999999999875
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=281.90 Aligned_cols=222 Identities=14% Similarity=0.240 Sum_probs=170.7
Q ss_pred ceeeecCCeEEEEEEECC---CCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEeecCCC
Q 045127 244 NLVGKNEGAAIYKGILRD---GTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWTNGG 320 (508)
Q Consensus 244 ~~lg~G~~g~V~~~~~~~---~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 320 (508)
+.||+|+||.||+|...+ ...+++|.+...........+.+|+..++.++||||+++++++......++||||+++|
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLG 80 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCC
Confidence 358999999999997533 45788898765555555677899999999999999999999999999999999999999
Q ss_pred CHHHHhcc------CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-----------
Q 045127 321 NVELWLSE------SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY----------- 383 (508)
Q Consensus 321 sL~~~l~~------~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~----------- 383 (508)
+|.+++.. ...++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+.
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~ 159 (269)
T cd05042 81 DLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQA-DFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITK 159 (269)
T ss_pred cHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhc-CEecccccHhheEecCCCcEEEeccccccccccchheecc
Confidence 99999872 2246778889999999999999999 99999999999999999999999998742
Q ss_pred -------------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhc
Q 045127 384 -------------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDER 437 (508)
Q Consensus 384 -------------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (508)
.++.++|||||||++|||++ |..||....... .+..... ........+.
T Consensus 160 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~-~~~~~~~----~~~~~~~~~~ 234 (269)
T cd05042 160 DCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQ-VLKQVVR----EQDIKLPKPQ 234 (269)
T ss_pred CCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHH-HHHHHhh----ccCccCCCCc
Confidence 12457999999999999999 788886432211 1111111 1111111111
Q ss_pred ccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHH
Q 045127 438 MMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMIT 477 (508)
Q Consensus 438 l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~ 477 (508)
+. ......+.+++..|| .||++|||++||++.|.
T Consensus 235 ~~-----~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 235 LD-----LKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred cc-----ccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 11 112344556777888 59999999999999873
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-34 Score=278.87 Aligned_cols=218 Identities=19% Similarity=0.292 Sum_probs=175.5
Q ss_pred eeeecCCeEEEEEEE---CCCCEEEEEEecCCCC-HHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEeecCCC
Q 045127 245 LVGKNEGAAIYKGIL---RDGTRVKIEIYKGDVS-REIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWTNGG 320 (508)
Q Consensus 245 ~lg~G~~g~V~~~~~---~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 320 (508)
.||+|+||.||+|.+ .++..+|+|+++.... ....+.+.+|+.+++.++||||+++++++. .+..++||||+++|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence 589999999999975 3578899999864432 345678999999999999999999999875 45678999999999
Q ss_pred CHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC----------------
Q 045127 321 NVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY---------------- 383 (508)
Q Consensus 321 sL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~---------------- 383 (508)
+|.+++. ...+++..+..++.|++.||+|||++ |++||||||+||+++.++.+||+|||.+.
T Consensus 81 ~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~-~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~ 159 (257)
T cd05116 81 PLNKFLQKNKHVTEKNITELVHQVSMGMKYLEET-NFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHGK 159 (257)
T ss_pred cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCCCC
Confidence 9999997 56789999999999999999999999 99999999999999999999999998642
Q ss_pred --------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHH
Q 045127 384 --------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQA 448 (508)
Q Consensus 384 --------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 448 (508)
.++.++|||||||++|||++ |+.||...... .....+..... +... ....
T Consensus 160 ~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~~~~~i~~~~~--------~~~~-----~~~~ 224 (257)
T cd05116 160 WPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGN--EVTQMIESGER--------MECP-----QRCP 224 (257)
T ss_pred CCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHCCCC--------CCCC-----CCCC
Confidence 12347999999999999998 99999753221 12222211110 0010 1124
Q ss_pred HHHHHHHHhcCCCCCCCCCCHHHHHHHHHHH
Q 045127 449 EQGLGLGLMCTDQPTGKLPSLVQIYNMITRA 479 (508)
Q Consensus 449 ~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i 479 (508)
..+.+++.+||+.||++||++++|.+.|+..
T Consensus 225 ~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~ 255 (257)
T cd05116 225 PEMYDLMKLCWTYGVDERPGFAVVELRLRNY 255 (257)
T ss_pred HHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence 5677899999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-34 Score=290.03 Aligned_cols=215 Identities=18% Similarity=0.172 Sum_probs=174.8
Q ss_pred ceeeecCCeEEEEEEE-CCCCEEEEEEecCCC--CHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEeecCCC
Q 045127 244 NLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDV--SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWTNGG 320 (508)
Q Consensus 244 ~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 320 (508)
+.||+|+||.||++.. .+++.||+|++.... .......+.+|+.+++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 4699999999999997 468999999996432 2234567889999999999999999999999999999999999999
Q ss_pred CHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC----------------
Q 045127 321 NVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY---------------- 383 (508)
Q Consensus 321 sL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~---------------- 383 (508)
+|..++. ...+++.++..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||++.
T Consensus 81 ~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~-~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~ 159 (328)
T cd05593 81 ELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSG-KIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTFCGTP 159 (328)
T ss_pred CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC-CeEecccCHHHeEECCCCcEEEecCcCCccCCCcccccccccCCc
Confidence 9998887 56789999999999999999999999 99999999999999999999999998642
Q ss_pred -----------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHHHHHH
Q 045127 384 -----------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQAEQGL 452 (508)
Q Consensus 384 -----------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~ 452 (508)
.++.++|||||||++|||++|+.||...... .......... ..+. ......+.
T Consensus 160 ~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~-----~~~~~~~~~~------~~~p-----~~~~~~~~ 223 (328)
T cd05593 160 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-----KLFELILMED------IKFP-----RTLSADAK 223 (328)
T ss_pred CccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHH-----HHHHHhccCC------ccCC-----CCCCHHHH
Confidence 2356789999999999999999999643211 1111111100 0010 01134567
Q ss_pred HHHHhcCCCCCCCCC-----CHHHHHHH
Q 045127 453 GLGLMCTDQPTGKLP-----SLVQIYNM 475 (508)
Q Consensus 453 ~l~~~Cl~~dP~~RP-----s~~evl~~ 475 (508)
+++.+|++.||++|| ++.|+++.
T Consensus 224 ~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 224 SLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred HHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 888999999999997 89999864
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-35 Score=285.30 Aligned_cols=240 Identities=18% Similarity=0.237 Sum_probs=184.7
Q ss_pred cCCCCCceeeecCCeEEEEEEEC-----CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEec--CCee
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILR-----DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNS--RRTR 310 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~~ 310 (508)
+.|+..+.||+|+||.||+|.+. ++..+|+|.+.........+.+.+|++.++.++||||+++++++.. +...
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL 83 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence 35677799999999999999863 3689999999755443456789999999999999999999999877 5578
Q ss_pred EEEEeecCCCCHHHHhccC--CCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-----
Q 045127 311 AIVTEWTNGGNVELWLSES--APSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY----- 383 (508)
Q Consensus 311 ~lv~e~~~~gsL~~~l~~~--~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~----- 383 (508)
+++|||+++++|.+++... .+++..+..++.|++.||+|||+. |++|+||||+||+++.++.++++|||.+.
T Consensus 84 ~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~-~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 162 (284)
T cd05038 84 RLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQ-RYIHRDLAARNILVESEDLVKISDFGLAKVLPED 162 (284)
T ss_pred EEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHhEEEcCCCCEEEcccccccccccC
Confidence 9999999999999999843 489999999999999999999999 99999999999999999999999997642
Q ss_pred -------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHH-Hhccchhhhhhhhc
Q 045127 384 -------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIR-MHYPENLQLVVDER 437 (508)
Q Consensus 384 -------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 437 (508)
.++.++||||||+++|||++|+.|+............... ......+.+.+...
T Consensus 163 ~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (284)
T cd05038 163 KDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEG 242 (284)
T ss_pred CcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHHcC
Confidence 2234689999999999999999998643221110000000 00000011111111
Q ss_pred ccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHH
Q 045127 438 MMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRA 479 (508)
Q Consensus 438 l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i 479 (508)
.... .......++.+++.+||+.+|++|||+.||+++|+.+
T Consensus 243 ~~~~-~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 243 ERLP-RPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred CcCC-CCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 1100 0112245688899999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-34 Score=276.53 Aligned_cols=221 Identities=17% Similarity=0.224 Sum_probs=180.6
Q ss_pred CCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCC-CCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEee
Q 045127 239 GFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGD-VSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEW 316 (508)
Q Consensus 239 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 316 (508)
+|+..+.||+|++|.||+|.. .+++.|++|.+... ........+.+|++++++++||||+++++++...+..++||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 477789999999999999997 46899999998633 2344677899999999999999999999999999999999999
Q ss_pred cCCCCHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC----------
Q 045127 317 TNGGNVELWLS---ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY---------- 383 (508)
Q Consensus 317 ~~~gsL~~~l~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~---------- 383 (508)
+++++|.+++. ...+++..+..++.|++.||.|||+. |++|+||||+||+++.++.++++|||.+.
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~-~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~~~ 159 (256)
T cd08529 81 AENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSK-KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFAN 159 (256)
T ss_pred CCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCcceEEEeCCCCEEEcccccceeccCccchhh
Confidence 99999999987 35789999999999999999999999 99999999999999999999999998532
Q ss_pred -----------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHH
Q 045127 384 -----------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFD 446 (508)
Q Consensus 384 -----------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 446 (508)
.++.++||||||+++|||++|+.||...... .....+.. ....... ..
T Consensus 160 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~~~~-----------~~~~~~~--~~ 224 (256)
T cd08529 160 TIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQG--ALILKIIR-----------GVFPPVS--QM 224 (256)
T ss_pred ccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHc-----------CCCCCCc--cc
Confidence 2356899999999999999999999743311 11111110 0000000 12
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 447 QAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 447 ~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
....+.+++.+||+.+|++||++.++++.
T Consensus 225 ~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 225 YSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred cCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 24567889999999999999999999864
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-34 Score=286.01 Aligned_cols=228 Identities=19% Similarity=0.281 Sum_probs=184.4
Q ss_pred hcCCCCCceeeecCCeEEEEEEEC------CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhc-CCCCccceeeEEecCCe
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGILR------DGTRVKIEIYKGDVSREIRDEFVEECKLLVQF-QHKNLIRVLGWNNSRRT 309 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 309 (508)
.++|...+.||+|+||.||+|... ++..||+|.++........+.+.+|+.+++++ +||||+++++++...+.
T Consensus 34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 113 (302)
T cd05055 34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGP 113 (302)
T ss_pred HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCc
Confidence 357888999999999999999741 24579999987655555567899999999999 79999999999999999
Q ss_pred eEEEEeecCCCCHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCCC--
Q 045127 310 RAIVTEWTNGGNVELWLSE---SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEYQ-- 384 (508)
Q Consensus 310 ~~lv~e~~~~gsL~~~l~~---~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~-- 384 (508)
.+++|||+++|+|.+++.. ..+++.++..++.|++.||+|||++ +++|+||||+||+++.++.++++|||.+..
T Consensus 114 ~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~-~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~ 192 (302)
T cd05055 114 ILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASK-NCIHRDLAARNVLLTHGKIVKICDFGLARDIM 192 (302)
T ss_pred eEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeehhhhccceEEEcCCCeEEECCCccccccc
Confidence 9999999999999999873 2389999999999999999999999 999999999999999999999999987431
Q ss_pred ---------------------------CCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhh
Q 045127 385 ---------------------------HRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDE 436 (508)
Q Consensus 385 ---------------------------~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (508)
++.++|||||||++|||++ |..||....... .+......... .
T Consensus 193 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~-~~~~~~~~~~~--------~ 263 (302)
T cd05055 193 NDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDS-KFYKLIKEGYR--------M 263 (302)
T ss_pred CCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchH-HHHHHHHcCCc--------C
Confidence 2456899999999999998 999986433211 11111111100 0
Q ss_pred cccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHH
Q 045127 437 RMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRA 479 (508)
Q Consensus 437 ~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i 479 (508)
... ......+.+++.+|++.+|++|||+.|+++.|+++
T Consensus 264 --~~~---~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 264 --AQP---EHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred --CCC---CCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 000 11235678899999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-34 Score=279.60 Aligned_cols=222 Identities=19% Similarity=0.330 Sum_probs=180.3
Q ss_pred cCCCCCceeeecCCeEEEEEEECCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEeec
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWT 317 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 317 (508)
++|+..+.||+|+||.||+|...++..+|+|.++.... ..+.+.+|+.++++++|+|++++++++. ....+++|||+
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~--~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~ 82 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM--SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYM 82 (260)
T ss_pred HHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC--CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEec
Confidence 46888899999999999999988888899999975433 2457899999999999999999999875 45678999999
Q ss_pred CCCCHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-----------
Q 045127 318 NGGNVELWLS---ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY----------- 383 (508)
Q Consensus 318 ~~gsL~~~l~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~----------- 383 (508)
++++|.+++. ...+++.++..++.|++.||+|||+. +++||||||+||++++++.++++|||.+.
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~-~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~ 161 (260)
T cd05070 83 SKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERM-NYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQ 161 (260)
T ss_pred CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCccceEEEeCCceEEeCCceeeeeccCccccccc
Confidence 9999999986 34589999999999999999999999 99999999999999999999999997631
Q ss_pred -----------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchH
Q 045127 384 -----------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMF 445 (508)
Q Consensus 384 -----------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 445 (508)
.++.++||||||+++|||++ |+.||...... ........... ... . .
T Consensus 162 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~--~~~~~~~~~~~--------~~~--~---~ 226 (260)
T cd05070 162 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNR--EVLEQVERGYR--------MPC--P---Q 226 (260)
T ss_pred CCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHH--HHHHHHHcCCC--------CCC--C---C
Confidence 23457999999999999999 89998643211 11111111100 000 0 1
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHH
Q 045127 446 DQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITR 478 (508)
Q Consensus 446 ~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 478 (508)
.....+.+++.+|++.+|++|||++++.+.|++
T Consensus 227 ~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 227 DCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred cCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 224568889999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-35 Score=292.93 Aligned_cols=220 Identities=13% Similarity=0.198 Sum_probs=184.2
Q ss_pred cCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCC-CCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEe
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGD-VSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTE 315 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 315 (508)
++|.+.+.||+|+||.||||+-+ +.+.||+|.+.+. ....+.+.+.+|++++++++||||+.++++|++..+.++|+|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 56788899999999999999964 5789999999643 344567889999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC------------
Q 045127 316 WTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE------------ 382 (508)
Q Consensus 316 ~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~------------ 382 (508)
|+.| +|..++. .+.++++.+..++.|++.||.|||+. +|+|||+||.||+++..+.+|+||||++
T Consensus 82 ~a~g-~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~-rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~vlts 159 (808)
T KOG0597|consen 82 YAVG-DLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSN-RILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTSVLTS 159 (808)
T ss_pred hhhh-hHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhc-CcccccCCcceeeecCCCceeechhhhhhhcccCceeeee
Confidence 9987 9999998 78899999999999999999999999 9999999999999999999999999874
Q ss_pred ---------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHH
Q 045127 383 ---------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQ 447 (508)
Q Consensus 383 ---------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 447 (508)
..|+..+|.||+||++||+++|++||... .+.+.++....+ ....+ ...
T Consensus 160 ikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~-----si~~Lv~~I~~d--------~v~~p---~~~ 223 (808)
T KOG0597|consen 160 IKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYAR-----SITQLVKSILKD--------PVKPP---STA 223 (808)
T ss_pred ccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHH-----HHHHHHHHHhcC--------CCCCc---ccc
Confidence 35667899999999999999999999732 222222222211 11111 123
Q ss_pred HHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 448 AEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 448 ~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
...+..+....+.+||.+|.|-.+++..
T Consensus 224 S~~f~nfl~gLL~kdP~~RltW~~Ll~H 251 (808)
T KOG0597|consen 224 SSSFVNFLQGLLIKDPAQRLTWTDLLGH 251 (808)
T ss_pred cHHHHHHHHHHhhcChhhcccHHHHhcC
Confidence 4566777778889999999999988764
|
|
| >cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-35 Score=285.60 Aligned_cols=223 Identities=20% Similarity=0.303 Sum_probs=179.8
Q ss_pred CCCCCceeeecCCeEEEEEEEC------CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEE
Q 045127 239 GFSKKNLVGKNEGAAIYKGILR------DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAI 312 (508)
Q Consensus 239 ~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 312 (508)
+|+..+.||+|+||.||+|... ++..||+|+++..........+.+|+.+++.++||||+++++++...+..++
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~ 85 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSM 85 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEE
Confidence 4566788999999999999863 2478999999765555556778999999999999999999999999999999
Q ss_pred EEeecCCCCHHHHhc-----------------cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceE
Q 045127 313 VTEWTNGGNVELWLS-----------------ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPL 375 (508)
Q Consensus 313 v~e~~~~gsL~~~l~-----------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~k 375 (508)
++||+++++|.+++. ...+++..+..++.|++.||+|||++ |++||||||+||++++++.+|
T Consensus 86 ~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~-gi~H~dlkp~Nil~~~~~~~k 164 (283)
T cd05091 86 IFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH-HVVHKDLATRNVLVFDKLNVK 164 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc-CccccccchhheEecCCCceE
Confidence 999999999999984 13478889999999999999999999 999999999999999999999
Q ss_pred EeeccCCC-----------------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHh
Q 045127 376 ISRFKIEY-----------------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMH 425 (508)
Q Consensus 376 l~Dfg~~~-----------------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~ 425 (508)
|+|||++. .++.++|||||||++|||++ |..||...... .....+..
T Consensus 165 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~--~~~~~i~~- 241 (283)
T cd05091 165 ISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ--DVIEMIRN- 241 (283)
T ss_pred ecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHHc-
Confidence 99998631 23567899999999999998 88888643211 11111111
Q ss_pred ccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHH
Q 045127 426 YPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMIT 477 (508)
Q Consensus 426 ~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~ 477 (508)
...... .......+.+++..||+.+|++||++++|++.|+
T Consensus 242 ----------~~~~~~--~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~ 281 (283)
T cd05091 242 ----------RQVLPC--PDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLR 281 (283)
T ss_pred ----------CCcCCC--CCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhh
Confidence 110000 0122455778999999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-34 Score=279.33 Aligned_cols=223 Identities=19% Similarity=0.329 Sum_probs=181.4
Q ss_pred hcCCCCCceeeecCCeEEEEEEECCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEee
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEW 316 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 316 (508)
.++|+..++||+|+||.||+|..++++.||+|.+..... ....+.+|+.++++++||||+++++++. .+..+++|||
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~--~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~ 81 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSM--SPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEY 81 (260)
T ss_pred hHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCC--cHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEc
Confidence 356888999999999999999988899999999865433 2467889999999999999999999874 4568999999
Q ss_pred cCCCCHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC----------
Q 045127 317 TNGGNVELWLS---ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY---------- 383 (508)
Q Consensus 317 ~~~gsL~~~l~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~---------- 383 (508)
+++++|.+++. ...+++.++..++.|++.||+|||+. |++||||||+||+++.++.++++|||.+.
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~-~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~ 160 (260)
T cd05067 82 MENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERK-NYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTAR 160 (260)
T ss_pred CCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcC-CeecccccHHhEEEcCCCCEEEccCcceeecCCCCcccc
Confidence 99999999886 34689999999999999999999999 99999999999999999999999997642
Q ss_pred ------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcch
Q 045127 384 ------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENM 444 (508)
Q Consensus 384 ------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 444 (508)
.++.++||||||+++||+++ |+.||...... ........... ....
T Consensus 161 ~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~~~~~~~~----------~~~~--- 225 (260)
T cd05067 161 EGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNP--EVIQNLERGYR----------MPRP--- 225 (260)
T ss_pred cCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChH--HHHHHHHcCCC----------CCCC---
Confidence 12457899999999999999 99999743211 11111111110 0000
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHH
Q 045127 445 FDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITR 478 (508)
Q Consensus 445 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 478 (508)
.....++.+++.+|++.+|++|||++++.+.|+.
T Consensus 226 ~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 226 DNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred CCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 1123468889999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-35 Score=291.16 Aligned_cols=219 Identities=15% Similarity=0.193 Sum_probs=174.2
Q ss_pred CCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCC--CHHHHHHHHHHHHHH---hhcCCCCccceeeEEecCCeeEEE
Q 045127 240 FSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDV--SREIRDEFVEECKLL---VQFQHKNLIRVLGWNNSRRTRAIV 313 (508)
Q Consensus 240 ~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l---~~l~h~niv~~~~~~~~~~~~~lv 313 (508)
|+..+.||+|+||.||+|.. .+++.||||+++... .....+.+.+|.+++ +.++||||+++++++..+...|+|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 56778999999999999997 468999999996432 122345666776655 566899999999999999999999
Q ss_pred EeecCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC----------
Q 045127 314 TEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY---------- 383 (508)
Q Consensus 314 ~e~~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~---------- 383 (508)
|||+++|+|...+....+++..+..++.|++.||+|||+. |++||||||+||+++.++.+||+|||++.
T Consensus 81 ~E~~~~~~L~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~-~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~ 159 (324)
T cd05589 81 MEYAAGGDLMMHIHTDVFSEPRAVFYAACVVLGLQYLHEN-KIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGDRTS 159 (324)
T ss_pred EcCCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC-CeEecCCCHHHeEECCCCcEEeCcccCCccCCCCCCccc
Confidence 9999999999999888899999999999999999999999 99999999999999999999999998632
Q ss_pred -----------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHH
Q 045127 384 -----------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFD 446 (508)
Q Consensus 384 -----------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 446 (508)
.++.++|||||||++|||++|+.||...... ..... +......... .
T Consensus 160 ~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~-----~~~~~--------i~~~~~~~p~---~ 223 (324)
T cd05589 160 TFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEE-----EVFDS--------IVNDEVRYPR---F 223 (324)
T ss_pred ccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHH-----HHHHH--------HHhCCCCCCC---C
Confidence 2356799999999999999999999743211 11111 1111110000 1
Q ss_pred HHHHHHHHHHhcCCCCCCCCC-----CHHHHHHH
Q 045127 447 QAEQGLGLGLMCTDQPTGKLP-----SLVQIYNM 475 (508)
Q Consensus 447 ~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~ 475 (508)
....+.+++.+||+.||++|| ++.++++.
T Consensus 224 ~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~ 257 (324)
T cd05589 224 LSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQ 257 (324)
T ss_pred CCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhC
Confidence 134567889999999999999 57777663
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=285.20 Aligned_cols=226 Identities=20% Similarity=0.325 Sum_probs=183.9
Q ss_pred hcCCCCCceeeecCCeEEEEEEEC------CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCee
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGILR------DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTR 310 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 310 (508)
.++|+..+.||+|+||.||+|... ++..||+|.+...........+.+|+.++++++||||+++++++..+...
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~ 83 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM 83 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence 467899999999999999999863 46789999997665555667899999999999999999999999998899
Q ss_pred EEEEeecCCCCHHHHhcc-----------------------CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEE
Q 045127 311 AIVTEWTNGGNVELWLSE-----------------------SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVL 367 (508)
Q Consensus 311 ~lv~e~~~~gsL~~~l~~-----------------------~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIl 367 (508)
+++|||+++|+|.+++.. ..+++..++.++.|++.||+|||+. +++||||||+||+
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~-~i~H~dl~p~nil 162 (288)
T cd05050 84 CLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER-KFVHRDLATRNCL 162 (288)
T ss_pred EEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC-CeecccccHhheE
Confidence 999999999999999862 2467888999999999999999999 9999999999999
Q ss_pred ecCCCceEEeeccCCC-----------------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCccc
Q 045127 368 LTDNLEPLISRFKIEY-----------------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAG 417 (508)
Q Consensus 368 l~~~~~~kl~Dfg~~~-----------------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~ 417 (508)
++.++.++++|||.+. .++.++|||||||++|||++ |..||......
T Consensus 163 ~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~--- 239 (288)
T cd05050 163 VGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHE--- 239 (288)
T ss_pred ecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH---
Confidence 9999999999998642 23457899999999999998 88888643211
Q ss_pred HHHHHHHhccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHH
Q 045127 418 FIEYIRMHYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITR 478 (508)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 478 (508)
+..... .+...... ......++.+++.+||+.+|++|||+.|+++.|++
T Consensus 240 --~~~~~~--------~~~~~~~~--~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 240 --EVIYYV--------RDGNVLSC--PDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred --HHHHHH--------hcCCCCCC--CCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 111111 11111000 01124567889999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-34 Score=279.26 Aligned_cols=224 Identities=19% Similarity=0.311 Sum_probs=180.8
Q ss_pred hcCCCCCceeeecCCeEEEEEEECCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEee
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEW 316 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 316 (508)
.++|+..++||+|+||.||+|.+.++..||+|.++.... ..+.+.+|++++++++||||+++++++.. ...++||||
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~--~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e~ 81 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM--SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEY 81 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCcc--CHHHHHHHHHHHHhCCCCCcceEEEEECC-CCcEEEEEc
Confidence 356889999999999999999987777899999964332 24578999999999999999999998754 557999999
Q ss_pred cCCCCHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC----------
Q 045127 317 TNGGNVELWLSE---SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY---------- 383 (508)
Q Consensus 317 ~~~gsL~~~l~~---~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~---------- 383 (508)
+++|+|.+++.. ..+++..+..++.|+++||+|||+. +++||||||+||++++++.++|+|||.+.
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~-~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~~ 160 (262)
T cd05071 82 MSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM-NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR 160 (262)
T ss_pred CCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHC-CccccccCcccEEEcCCCcEEeccCCceeeccccccccc
Confidence 999999999973 4578999999999999999999999 99999999999999999999999998642
Q ss_pred ------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcch
Q 045127 384 ------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENM 444 (508)
Q Consensus 384 ------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 444 (508)
.++.++||||||+++|||+| |+.||....... ......... .. ...
T Consensus 161 ~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~--~~~~~~~~~----------~~---~~~ 225 (262)
T cd05071 161 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE--VLDQVERGY----------RM---PCP 225 (262)
T ss_pred cCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHH--HHHHHhcCC----------CC---CCc
Confidence 23457999999999999999 888886432211 111000000 00 001
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHH
Q 045127 445 FDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRA 479 (508)
Q Consensus 445 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i 479 (508)
......+.+++.+|++.||++||++.++++.|++.
T Consensus 226 ~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 226 PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred cccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 12345678999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-35 Score=298.69 Aligned_cols=228 Identities=12% Similarity=0.081 Sum_probs=182.3
Q ss_pred HhhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCC--CHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeE
Q 045127 235 AATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDV--SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRA 311 (508)
Q Consensus 235 ~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 311 (508)
...++|+..+.||+|+||.||+|.. .+++.||+|++.... .....+.+.+|+.+++.++||||+++++++.++...+
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~ 119 (370)
T cd05596 40 MKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLY 119 (370)
T ss_pred CCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence 3557899999999999999999997 468999999996321 1223456789999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC--------
Q 045127 312 IVTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY-------- 383 (508)
Q Consensus 312 lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~-------- 383 (508)
+||||+++|+|.+++....+++..+..++.|++.||+|||++ ||+||||||+|||++.++.+||+|||.+.
T Consensus 120 lv~Ey~~gg~L~~~l~~~~l~~~~~~~~~~qi~~aL~~LH~~-~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~~~ 198 (370)
T cd05596 120 MVMEYMPGGDLVNLMSNYDIPEKWARFYTAEVVLALDAIHSM-GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGMV 198 (370)
T ss_pred EEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHHEEEcCCCCEEEEeccceeeccCCCcc
Confidence 999999999999999877889999999999999999999999 99999999999999999999999998631
Q ss_pred ------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhccc
Q 045127 384 ------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMM 439 (508)
Q Consensus 384 ------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 439 (508)
.++.++|||||||++|||++|+.||...... .......... ..+.
T Consensus 199 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~-----~~~~~i~~~~------~~~~ 267 (370)
T cd05596 199 RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV-----GTYSKIMDHK------NSLT 267 (370)
T ss_pred cCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHH-----HHHHHHHcCC------CcCC
Confidence 1456799999999999999999999743211 1111111000 0010
Q ss_pred CCcchHHHHHHHHHHHHhcCCCCCCC--CCCHHHHHHH
Q 045127 440 LTENMFDQAEQGLGLGLMCTDQPTGK--LPSLVQIYNM 475 (508)
Q Consensus 440 ~~~~~~~~~~~l~~l~~~Cl~~dP~~--RPs~~evl~~ 475 (508)
.. ........+.+++.+|++.+|.+ |||++|+++.
T Consensus 268 ~~-~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 268 FP-DDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred CC-CcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 00 00112456677889999999988 9999999764
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-35 Score=297.74 Aligned_cols=224 Identities=10% Similarity=0.086 Sum_probs=175.6
Q ss_pred CCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCC--CHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEe
Q 045127 239 GFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDV--SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTE 315 (508)
Q Consensus 239 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 315 (508)
.|+..+.||+|+||.||+|+. .+++.||+|++.... .......+.+|++++++++||||+++++++.+++..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 578889999999999999987 568999999996432 22345678999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-----------
Q 045127 316 WTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY----------- 383 (508)
Q Consensus 316 ~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~----------- 383 (508)
|+++|+|.+++. ...+++..+..++.|++.||+|||+. ||+||||||+|||++.++.+||+|||++.
T Consensus 82 ~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~-givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~ 160 (381)
T cd05626 82 YIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKM-GFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYY 160 (381)
T ss_pred cCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC-CeeecCCcHHHEEECCCCCEEEeeCcCCcccccccccccc
Confidence 999999999987 56789999999999999999999999 99999999999999999999999999631
Q ss_pred ---------------------------------------------------------------CCCCcchhhHHHHHHHH
Q 045127 384 ---------------------------------------------------------------QHRSTKYVYKFGLFLLE 400 (508)
Q Consensus 384 ---------------------------------------------------------------~~~~~~Dv~SlGvil~e 400 (508)
.++.++|||||||++||
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~e 240 (381)
T cd05626 161 QKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFE 240 (381)
T ss_pred cccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHHHH
Confidence 24567999999999999
Q ss_pred HHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHHHHHHHHHHh--cCCCCCCCCCCHHHHHHH
Q 045127 401 MITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQAEQGLGLGLM--CTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 401 lltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~--Cl~~dP~~RPs~~evl~~ 475 (508)
|++|+.||......... . .+. ..... ..+.... .....+.+++.+ |+..+|..||+++|+++.
T Consensus 241 lltG~~Pf~~~~~~~~~-~-~i~-~~~~~------~~~~~~~---~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~h 305 (381)
T cd05626 241 MLVGQPPFLAPTPTETQ-L-KVI-NWENT------LHIPPQV---KLSPEAVDLITKLCCSAEERLGRNGADDIKAH 305 (381)
T ss_pred HHhCCCCCcCCCHHHHH-H-HHH-ccccc------cCCCCCC---CCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 99999999753321110 0 000 00000 0000000 012334445544 677788889999999875
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-34 Score=285.02 Aligned_cols=224 Identities=13% Similarity=0.168 Sum_probs=182.6
Q ss_pred hcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEe
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTE 315 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 315 (508)
..+|+..+.||+|++|.||+|.. .+++.|++|.+...... ....+.+|+.+++.++||||+++++.+..+...++|||
T Consensus 19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~-~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e 97 (296)
T cd06654 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP-KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME 97 (296)
T ss_pred ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcc-hHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeec
Confidence 35788899999999999999996 46889999998654433 45678899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC------------
Q 045127 316 WTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------------ 383 (508)
Q Consensus 316 ~~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------------ 383 (508)
|+++++|.+++....+++.++..++.|++.||+|||+. |++||||||+||+++.++.+||+|||.+.
T Consensus 98 ~~~~~~L~~~~~~~~~~~~~~~~i~~ql~~aL~~LH~~-gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~ 176 (296)
T cd06654 98 YLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSN-QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTM 176 (296)
T ss_pred ccCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEEcCCCCEEECccccchhccccccccCcc
Confidence 99999999999877889999999999999999999999 99999999999999999999999998632
Q ss_pred ---------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHH
Q 045127 384 ---------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQA 448 (508)
Q Consensus 384 ---------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 448 (508)
..+.++|||||||++|+|++|+.||....... ....... .. .+.+... ....
T Consensus 177 ~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~-~~~~~~~----~~-----~~~~~~~---~~~~ 243 (296)
T cd06654 177 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR-ALYLIAT----NG-----TPELQNP---EKLS 243 (296)
T ss_pred cCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHH-hHHHHhc----CC-----CCCCCCc---cccC
Confidence 23467999999999999999999996432211 0111000 00 0001111 1123
Q ss_pred HHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 449 EQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 449 ~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
..+.+++.+||..+|++|||+.|+++.
T Consensus 244 ~~l~~li~~~l~~~p~~Rpt~~eil~~ 270 (296)
T cd06654 244 AIFRDFLNRCLDMDVEKRGSAKELLQH 270 (296)
T ss_pred HHHHHHHHHHCcCCcccCcCHHHHhhC
Confidence 457788999999999999999999974
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-34 Score=290.95 Aligned_cols=173 Identities=13% Similarity=0.165 Sum_probs=154.4
Q ss_pred cCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCC--CHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEE
Q 045127 238 NGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDV--SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVT 314 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 314 (508)
++|+..+.||+|+||+||+|.. .+++.||+|+++... .......+.+|+.++.+++||||+++++.+.+....++||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 4788999999999999999987 468999999996432 1223567889999999999999999999999999999999
Q ss_pred eecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC----------
Q 045127 315 EWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY---------- 383 (508)
Q Consensus 315 e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~---------- 383 (508)
||+++|+|.+++. ...+++..+..++.|++.||+|||++ ||+||||||+|||++.++.+||+|||++.
T Consensus 81 E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~-givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~ 159 (363)
T cd05628 81 EFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQL-GFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEF 159 (363)
T ss_pred cCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC-CeEecCCCHHHeEECCCCCEEEeeccCcccccccccccc
Confidence 9999999999987 67899999999999999999999999 99999999999999999999999999642
Q ss_pred ----------------------------------------------------CCCCcchhhHHHHHHHHHHhCCCCCccc
Q 045127 384 ----------------------------------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEF 411 (508)
Q Consensus 384 ----------------------------------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~ 411 (508)
.++.++|||||||++|||++|+.||...
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~~ 239 (363)
T cd05628 160 YRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSE 239 (363)
T ss_pred cccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCCC
Confidence 2356789999999999999999999743
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-34 Score=286.61 Aligned_cols=235 Identities=13% Similarity=0.184 Sum_probs=179.2
Q ss_pred cCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEee
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEW 316 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 316 (508)
++|...+.||+|+||.||+|... +++.||+|.++..........+.+|+.++++++||||+++++++..++..++||||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 85 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY 85 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence 57889999999999999999974 67899999987544333445678899999999999999999999999999999999
Q ss_pred cCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-----------
Q 045127 317 TNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY----------- 383 (508)
Q Consensus 317 ~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~----------- 383 (508)
+++ +|.+++. ...+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||.+.
T Consensus 86 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~-~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~ 163 (309)
T cd07872 86 LDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRR-KVLHRDLKPQNLLINERGELKLADFGLARAKSVPTKTYSN 163 (309)
T ss_pred CCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEECCCCCEEECccccceecCCCcccccc
Confidence 975 8888776 44588999999999999999999999 99999999999999999999999998631
Q ss_pred -----------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhc--cch-hhhh------hhhc
Q 045127 384 -----------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHY--PEN-LQLV------VDER 437 (508)
Q Consensus 384 -----------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~--~~~-~~~~------~~~~ 437 (508)
.++.++|||||||++|||+||+.||......+ .+........ ... .... .+..
T Consensus 164 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (309)
T cd07872 164 EVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVED-ELHLIFRLLGTPTEETWPGISSNDEFKNYN 242 (309)
T ss_pred ccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCCHHHHhhhcchhhhhhhh
Confidence 23567899999999999999999997543211 1111111000 000 0000 0000
Q ss_pred ccCCc------chHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 438 MMLTE------NMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 438 l~~~~------~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
..... ........+.+++.+|++.||.+|||+.|+++.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 286 (309)
T cd07872 243 FPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKH 286 (309)
T ss_pred cCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcC
Confidence 00000 000123456789999999999999999999873
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=282.94 Aligned_cols=224 Identities=20% Similarity=0.357 Sum_probs=182.5
Q ss_pred cCCCCCceeeecCCeEEEEEEECC------CCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeE
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILRD------GTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRA 311 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~~------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 311 (508)
++|+..+.||+|+||.||+|...+ +..||+|.+...........+.+|+.+++.++||||+++++++......+
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~ 85 (277)
T cd05032 6 EKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTL 85 (277)
T ss_pred HHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCcE
Confidence 578888999999999999998642 36899999876555555678899999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHhcc-----------CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeecc
Q 045127 312 IVTEWTNGGNVELWLSE-----------SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFK 380 (508)
Q Consensus 312 lv~e~~~~gsL~~~l~~-----------~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg 380 (508)
+||||+++|+|.+++.. ..+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||
T Consensus 86 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~di~p~nill~~~~~~kl~dfg 164 (277)
T cd05032 86 VVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK-KFVHRDLAARNCMVAEDLTVKIGDFG 164 (277)
T ss_pred EEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC-CccccccChheEEEcCCCCEEECCcc
Confidence 99999999999999862 2367889999999999999999999 99999999999999999999999998
Q ss_pred CC-----------------------------CCCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchh
Q 045127 381 IE-----------------------------YQHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENL 430 (508)
Q Consensus 381 ~~-----------------------------~~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~ 430 (508)
++ ..++.++|||||||++||+++ |+.||...... .+........ .
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~--~~~~~~~~~~---~ 239 (277)
T cd05032 165 MTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNE--EVLKFVIDGG---H 239 (277)
T ss_pred cchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHH--HHHHHHhcCC---C
Confidence 63 234567999999999999998 99998643211 1222111100 0
Q ss_pred hhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHH
Q 045127 431 QLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMIT 477 (508)
Q Consensus 431 ~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~ 477 (508)
... . ......+.+++.+||+.+|++|||+.++++.|+
T Consensus 240 -----~~~--~---~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 240 -----LDL--P---ENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred -----CCC--C---CCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 000 1 112456788999999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological |
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-34 Score=282.31 Aligned_cols=229 Identities=18% Similarity=0.351 Sum_probs=183.4
Q ss_pred hhcCCCCCceeeecCCeEEEEEEEC------CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCe
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGILR------DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRT 309 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 309 (508)
..++|++.+.||+|+||.||+|... .+..||+|.+...........+.+|+..++.++||||+++++++..+..
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQP 83 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 4578999999999999999999753 2458999998755544455678899999999999999999999998889
Q ss_pred eEEEEeecCCCCHHHHhcc-----------CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEee
Q 045127 310 RAIVTEWTNGGNVELWLSE-----------SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISR 378 (508)
Q Consensus 310 ~~lv~e~~~~gsL~~~l~~-----------~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~D 378 (508)
.++||||+++|+|.+++.. ...++..+..++.|++.||+|||++ +++||||||+||+++.++.++++|
T Consensus 84 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~-~i~H~dikp~nili~~~~~~~L~D 162 (288)
T cd05061 84 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK-KFVHRDLAARNCMVAHDFTVKIGD 162 (288)
T ss_pred cEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcCCCCChheEEEcCCCcEEECc
Confidence 9999999999999999962 2346678889999999999999999 999999999999999999999999
Q ss_pred ccCCC-----------------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccc
Q 045127 379 FKIEY-----------------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPE 428 (508)
Q Consensus 379 fg~~~-----------------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~ 428 (508)
||.+. .++.++|||||||++|||++ |..||...... ......
T Consensus 163 fg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~--~~~~~~------ 234 (288)
T cd05061 163 FGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE--QVLKFV------ 234 (288)
T ss_pred CCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHH------
Confidence 98642 23567899999999999998 78888643211 111111
Q ss_pred hhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHH
Q 045127 429 NLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAY 480 (508)
Q Consensus 429 ~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~ 480 (508)
.+...... .......+.+++.+|++.||++|||+.++++.|++..
T Consensus 235 -----~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~ 279 (288)
T cd05061 235 -----MDGGYLDQ--PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 279 (288)
T ss_pred -----HcCCCCCC--CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence 11100000 0112356888999999999999999999999988754
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=281.89 Aligned_cols=237 Identities=12% Similarity=0.122 Sum_probs=181.9
Q ss_pred cCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCC-----eeE
Q 045127 238 NGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRR-----TRA 311 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-----~~~ 311 (508)
-.|...+++|+|+||.||+|.. .+++.||||+..++.. .-.+|+++|++++|||||++..+|.... ...
T Consensus 24 i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r-----~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~ln 98 (364)
T KOG0658|consen 24 ISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR-----YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLN 98 (364)
T ss_pred EEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC-----cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHH
Confidence 3567789999999999999997 4579999999865433 2347999999999999999998887432 236
Q ss_pred EEEeecCCCCHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCC-CceEEeeccCC---
Q 045127 312 IVTEWTNGGNVELWLS-----ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDN-LEPLISRFKIE--- 382 (508)
Q Consensus 312 lv~e~~~~gsL~~~l~-----~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~-~~~kl~Dfg~~--- 382 (508)
+|||||+. +|.++++ +..++...+.-+.+||.+||+|||+. ||+||||||.|+|+|.+ |.+||||||.+
T Consensus 99 lVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~-~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L 176 (364)
T KOG0658|consen 99 LVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSH-GICHRDIKPQNLLVDPDTGVLKICDFGSAKVL 176 (364)
T ss_pred HHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhc-CcccCCCChheEEEcCCCCeEEeccCCcceee
Confidence 89999986 8999988 67889899999999999999999999 99999999999999965 99999999974
Q ss_pred ------------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccch---hh----
Q 045127 383 ------------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPEN---LQ---- 431 (508)
Q Consensus 383 ------------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~---~~---- 431 (508)
..|+.+.||||.||++.||+-|++-|.+.+. ..++...++-.-.+. +.
T Consensus 177 ~~~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~-~dQL~eIik~lG~Pt~e~I~~mn~ 255 (364)
T KOG0658|consen 177 VKGEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSS-VDQLVEIIKVLGTPTREDIKSMNP 255 (364)
T ss_pred ccCCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCH-HHHHHHHHHHhCCCCHHHHhhcCc
Confidence 4578899999999999999999999986432 223333332211111 11
Q ss_pred ---hhhhhcccCCc----chHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH--HHHHHhh
Q 045127 432 ---LVVDERMMLTE----NMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM--ITRAYKS 482 (508)
Q Consensus 432 ---~~~~~~l~~~~----~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~--L~~i~~~ 482 (508)
+.-.+.+.... .......+.++++.++++.+|.+|.++.|++.. +.+++..
T Consensus 256 ~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr~~ 315 (364)
T KOG0658|consen 256 NYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELRDP 315 (364)
T ss_pred ccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhhCc
Confidence 11112221111 112345678889999999999999999999865 4555544
|
|
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-34 Score=277.03 Aligned_cols=222 Identities=23% Similarity=0.333 Sum_probs=179.1
Q ss_pred cCCCCCceeeecCCeEEEEEEECCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEe-cCCeeEEEEee
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNN-SRRTRAIVTEW 316 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-~~~~~~lv~e~ 316 (508)
.+|+..+.||+|+||.||++... |..||+|.++... ..+.+.+|+.++++++|+|++++++++. .+...+++|||
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~ 81 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA---TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 81 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCCc---hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEEC
Confidence 46888899999999999999875 7889999986432 3467899999999999999999999764 45678999999
Q ss_pred cCCCCHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC----------
Q 045127 317 TNGGNVELWLSE---SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY---------- 383 (508)
Q Consensus 317 ~~~gsL~~~l~~---~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~---------- 383 (508)
+++++|.+++.. ..+++..+..++.|++.||+|||++ |++||||||+||++++++.+|++|||.+.
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 160 (256)
T cd05082 82 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEAN-NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK 160 (256)
T ss_pred CCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CEeccccchheEEEcCCCcEEecCCccceeccccCCCCc
Confidence 999999999872 3478999999999999999999999 99999999999999999999999998642
Q ss_pred --------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHH
Q 045127 384 --------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQA 448 (508)
Q Consensus 384 --------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 448 (508)
.++.++|||||||++|||++ |+.||..... ..+...+...... ... ....
T Consensus 161 ~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~--~~~~~~~~~~~~~--------~~~-----~~~~ 225 (256)
T cd05082 161 LPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL--KDVVPRVEKGYKM--------DAP-----DGCP 225 (256)
T ss_pred cceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHhcCCCC--------CCC-----CCCC
Confidence 34567999999999999998 9999864221 1111111111110 000 1224
Q ss_pred HHHHHHHHhcCCCCCCCCCCHHHHHHHHHHH
Q 045127 449 EQGLGLGLMCTDQPTGKLPSLVQIYNMITRA 479 (508)
Q Consensus 449 ~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i 479 (508)
..+.+++.+|++.+|++|||+.++++.|+++
T Consensus 226 ~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 226 PVVYDVMKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred HHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence 5677889999999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-34 Score=279.12 Aligned_cols=229 Identities=17% Similarity=0.274 Sum_probs=186.0
Q ss_pred cCCCCCceeeecCCeEEEEEEEC-CCC----EEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEE
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILR-DGT----RVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAI 312 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 312 (508)
++|+..+.||+|+||.||+|.+. +|+ .+|+|.............+.+|+.++++++||||+++++++.. ...++
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~ 85 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQL 85 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEE
Confidence 56788899999999999999864 333 6899998766555567789999999999999999999999887 77899
Q ss_pred EEeecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-------
Q 045127 313 VTEWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------- 383 (508)
Q Consensus 313 v~e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------- 383 (508)
||||+++|+|.+++. ...+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+|||.+.
T Consensus 86 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~-~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~~ 164 (279)
T cd05057 86 ITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEK-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEK 164 (279)
T ss_pred EEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC-CEEecccCcceEEEcCCCeEEECCCcccccccCccc
Confidence 999999999999987 34689999999999999999999999 99999999999999999999999998642
Q ss_pred ----------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhcccC
Q 045127 384 ----------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMML 440 (508)
Q Consensus 384 ----------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 440 (508)
.++.++||||||+++||+++ |+.||+..... .+...+.... ....
T Consensus 165 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~~~~~~~----------~~~~ 232 (279)
T cd05057 165 EYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAV--EIPDLLEKGE----------RLPQ 232 (279)
T ss_pred ceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHH--HHHHHHhCCC----------CCCC
Confidence 23457999999999999998 99999753211 1121111110 0000
Q ss_pred CcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhC
Q 045127 441 TENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSC 483 (508)
Q Consensus 441 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 483 (508)
.. .....+.+++.+||..+|++|||+.++++.|.++....
T Consensus 233 ~~---~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~~ 272 (279)
T cd05057 233 PP---ICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMARDP 272 (279)
T ss_pred CC---CCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhCC
Confidence 10 12345678889999999999999999999999986644
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-34 Score=294.55 Aligned_cols=230 Identities=19% Similarity=0.299 Sum_probs=183.6
Q ss_pred hhcCCCCCceeeecCCeEEEEEEEC------CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcC-CCCccceeeEEecCC
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGILR------DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQ-HKNLIRVLGWNNSRR 308 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~ 308 (508)
..++|...+.||+|+||.||+|++. .+..||+|+++........+.+.+|++++.++. ||||+++++++....
T Consensus 35 ~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~ 114 (401)
T cd05107 35 PRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGG 114 (401)
T ss_pred cHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCC
Confidence 3346788899999999999999863 246899999976555545667899999999997 999999999999988
Q ss_pred eeEEEEeecCCCCHHHHhcc------------------------------------------------------------
Q 045127 309 TRAIVTEWTNGGNVELWLSE------------------------------------------------------------ 328 (508)
Q Consensus 309 ~~~lv~e~~~~gsL~~~l~~------------------------------------------------------------ 328 (508)
..++||||+++|+|.++++.
T Consensus 115 ~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (401)
T cd05107 115 PIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQD 194 (401)
T ss_pred CcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhc
Confidence 99999999999999998852
Q ss_pred ---------------------------------------CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEec
Q 045127 329 ---------------------------------------SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLT 369 (508)
Q Consensus 329 ---------------------------------------~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~ 369 (508)
..+++..+.+++.|++.||+|||+. +++||||||+||+++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~-~ivHrdlkp~NiLl~ 273 (401)
T cd05107 195 MKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK-NCVHRDLAARNVLIC 273 (401)
T ss_pred chhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC-CcCcccCCcceEEEe
Confidence 1356778889999999999999999 999999999999999
Q ss_pred CCCceEEeeccCCCC-----------------------------CCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHH
Q 045127 370 DNLEPLISRFKIEYQ-----------------------------HRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFI 419 (508)
Q Consensus 370 ~~~~~kl~Dfg~~~~-----------------------------~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~ 419 (508)
+++.+|++|||++.. ++.++|||||||++|||++ |..||......+. ..
T Consensus 274 ~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~-~~ 352 (401)
T cd05107 274 EGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQ-FY 352 (401)
T ss_pred CCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHH-HH
Confidence 999999999987531 2456899999999999998 8999864332111 11
Q ss_pred HHHHHhccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHH
Q 045127 420 EYIRMHYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAY 480 (508)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~ 480 (508)
..+.... ..... ......+.+++.+||+.+|.+||+++||++.|+++.
T Consensus 353 ~~~~~~~----------~~~~p---~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 353 NAIKRGY----------RMAKP---AHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred HHHHcCC----------CCCCC---CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 1111110 00000 112456788999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-34 Score=288.97 Aligned_cols=215 Identities=14% Similarity=0.161 Sum_probs=173.2
Q ss_pred ceeeecCCeEEEEEEE----CCCCEEEEEEecCCC---CHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEee
Q 045127 244 NLVGKNEGAAIYKGIL----RDGTRVKIEIYKGDV---SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEW 316 (508)
Q Consensus 244 ~~lg~G~~g~V~~~~~----~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 316 (508)
+.||+|+||.||+++. .+++.||+|+++... .......+.+|+.+++.++||||+++++++..++..++||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 6799999999999985 357899999986432 122345678999999999999999999999999999999999
Q ss_pred cCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC------------
Q 045127 317 TNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------------ 383 (508)
Q Consensus 317 ~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------------ 383 (508)
+++|+|.+++. ...+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++.
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 160 (323)
T cd05584 82 LSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQ-GIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVTHTF 160 (323)
T ss_pred CCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCCccccc
Confidence 99999999987 56678899999999999999999999 99999999999999999999999998642
Q ss_pred ---------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHH
Q 045127 384 ---------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQA 448 (508)
Q Consensus 384 ---------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 448 (508)
.++.++|||||||++|||++|+.||...... ...... ......... ...
T Consensus 161 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~-----~~~~~~--------~~~~~~~~~---~~~ 224 (323)
T cd05584 161 CGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRK-----KTIDKI--------LKGKLNLPP---YLT 224 (323)
T ss_pred CCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHH-----HHHHHH--------HcCCCCCCC---CCC
Confidence 2346799999999999999999999743211 111111 111111111 113
Q ss_pred HHHHHHHHhcCCCCCCCCC-----CHHHHHHH
Q 045127 449 EQGLGLGLMCTDQPTGKLP-----SLVQIYNM 475 (508)
Q Consensus 449 ~~l~~l~~~Cl~~dP~~RP-----s~~evl~~ 475 (508)
..+.+++.+|++.||++|| +++++++.
T Consensus 225 ~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h 256 (323)
T cd05584 225 PEARDLLKKLLKRNPSSRLGAGPGDAAEVQSH 256 (323)
T ss_pred HHHHHHHHHHcccCHhHcCCCCCCCHHHHhcC
Confidence 4567889999999999999 88888763
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-34 Score=286.14 Aligned_cols=231 Identities=18% Similarity=0.274 Sum_probs=186.3
Q ss_pred hcCCCCCceeeecCCeEEEEEEEC--------CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhc-CCCCccceeeEEecC
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGILR--------DGTRVKIEIYKGDVSREIRDEFVEECKLLVQF-QHKNLIRVLGWNNSR 307 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 307 (508)
.++|...+.||+|+||.||+|... ....+|+|.++..........+..|+.+++++ +||||+++++++...
T Consensus 11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 90 (314)
T cd05099 11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQE 90 (314)
T ss_pred HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccC
Confidence 357888999999999999999752 24579999987655555677889999999999 699999999999988
Q ss_pred CeeEEEEeecCCCCHHHHhcc-----------------CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecC
Q 045127 308 RTRAIVTEWTNGGNVELWLSE-----------------SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTD 370 (508)
Q Consensus 308 ~~~~lv~e~~~~gsL~~~l~~-----------------~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~ 370 (508)
...+++|||+++|+|.+++.. ..+++.++..++.|++.||+|||++ |++||||||+||+++.
T Consensus 91 ~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~-gi~H~dlkp~Nill~~ 169 (314)
T cd05099 91 GPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR-RCIHRDLAARNVLVTE 169 (314)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC-CeeeccccceeEEEcC
Confidence 889999999999999999862 3478999999999999999999999 9999999999999999
Q ss_pred CCceEEeeccCCC-----------------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHH
Q 045127 371 NLEPLISRFKIEY-----------------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIE 420 (508)
Q Consensus 371 ~~~~kl~Dfg~~~-----------------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~ 420 (508)
++.+||+|||.+. .++.++||||||+++|||++ |..||...... .+..
T Consensus 170 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~--~~~~ 247 (314)
T cd05099 170 DNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVE--ELFK 247 (314)
T ss_pred CCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHH--HHHH
Confidence 9999999998752 23457899999999999999 88998643211 1111
Q ss_pred HHHHhccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhC
Q 045127 421 YIRMHYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSC 483 (508)
Q Consensus 421 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 483 (508)
...... ..... ......+.+++.+||+.+|++|||+.|+++.|.++....
T Consensus 248 ~~~~~~----------~~~~~---~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~ 297 (314)
T cd05099 248 LLREGH----------RMDKP---SNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAAV 297 (314)
T ss_pred HHHcCC----------CCCCC---CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHHh
Confidence 111100 00000 112346678999999999999999999999999987653
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-34 Score=284.73 Aligned_cols=237 Identities=16% Similarity=0.214 Sum_probs=183.9
Q ss_pred cCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEee
Q 045127 238 NGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEW 316 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 316 (508)
++|+..+.||+|+||.||++.. .++..+|+|.+..........++.+|++++++++||||+++++++..++..++||||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey 80 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH 80 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence 4688999999999999999997 468889999987655555567789999999999999999999999999999999999
Q ss_pred cCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC------------
Q 045127 317 TNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------------ 383 (508)
Q Consensus 317 ~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------------ 383 (508)
+++++|.+++. ...+++..+..++.|+++||+|||+..+++||||||+||+++.++.+||+|||.+.
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 160 (308)
T cd06615 81 MDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVG 160 (308)
T ss_pred cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCcccccccccccCCC
Confidence 99999999997 56789999999999999999999973399999999999999999999999998642
Q ss_pred -------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccch---------------------
Q 045127 384 -------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPEN--------------------- 429 (508)
Q Consensus 384 -------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~--------------------- 429 (508)
.++.++||||||+++|||++|+.||...... .............
T Consensus 161 ~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (308)
T cd06615 161 TRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAK--ELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMA 238 (308)
T ss_pred CcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchh--hHHHhhcCccccccccCCcccccCCCCCccchhh
Confidence 2456799999999999999999998643211 1111111000000
Q ss_pred hhhhhhhcccCCc---chHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHH
Q 045127 430 LQLVVDERMMLTE---NMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMI 476 (508)
Q Consensus 430 ~~~~~~~~l~~~~---~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L 476 (508)
..+..+....... ........+.+++.+||+.+|++|||+.|+++..
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~ 288 (308)
T cd06615 239 IFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHP 288 (308)
T ss_pred HHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcCh
Confidence 0000100000000 0001234578899999999999999999998763
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-34 Score=281.74 Aligned_cols=214 Identities=22% Similarity=0.284 Sum_probs=168.8
Q ss_pred eeeecCCeEEEEEEECC-------------------------CCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccc
Q 045127 245 LVGKNEGAAIYKGILRD-------------------------GTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIR 299 (508)
Q Consensus 245 ~lg~G~~g~V~~~~~~~-------------------------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 299 (508)
.||+|+||.||+|.+.. ...|++|++.... ......+.+|+.+++.++||||++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~-~~~~~~~~~~~~~~~~l~h~niv~ 80 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSH-RDIALAFFETASLMSQVSHIHLAF 80 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHH-HHHHHHHHHHHHHHhcCCCCCeee
Confidence 68999999999997521 1358899885432 234567889999999999999999
Q ss_pred eeeEEecCCeeEEEEeecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCC-----
Q 045127 300 VLGWNNSRRTRAIVTEWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNL----- 372 (508)
Q Consensus 300 ~~~~~~~~~~~~lv~e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~----- 372 (508)
+++++..+...++||||+++|+|..++. ...+++..+.+++.|+++||+|||++ +|+||||||+||+++..+
T Consensus 81 ~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~iiH~dlkp~Nill~~~~~~~~~ 159 (274)
T cd05076 81 VHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDK-NLVHGNVCAKNILLARLGLAEGT 159 (274)
T ss_pred EEEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcC-CccCCCCCcccEEEeccCcccCc
Confidence 9999999999999999999999999986 46789999999999999999999999 999999999999998543
Q ss_pred --ceEEeeccCC------------------------CCCCCcchhhHHHHHHHHH-HhCCCCCcccccCcccHHHHHHHh
Q 045127 373 --EPLISRFKIE------------------------YQHRSTKYVYKFGLFLLEM-ITNRRPLEEFERGEAGFIEYIRMH 425 (508)
Q Consensus 373 --~~kl~Dfg~~------------------------~~~~~~~Dv~SlGvil~el-ltg~~P~~~~~~~~~~~~~~~~~~ 425 (508)
.+|++|||.+ ..++.++||||||+++||+ ++|+.||....... ...+..
T Consensus 160 ~~~~kl~d~g~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~--~~~~~~-- 235 (274)
T cd05076 160 SPFIKLSDPGVSFTALSREERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSE--KERFYE-- 235 (274)
T ss_pred cceeeecCCccccccccccccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHH--HHHHHH--
Confidence 3799999853 1246689999999999998 47999987533211 111111
Q ss_pred ccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHH
Q 045127 426 YPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMIT 477 (508)
Q Consensus 426 ~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~ 477 (508)
....... .....+.+++.+||+.+|++|||+.+|++.|+
T Consensus 236 ----------~~~~~~~---~~~~~~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 236 ----------KKHRLPE---PSCKELATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred ----------hccCCCC---CCChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 1110000 01235778999999999999999999998773
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-34 Score=277.82 Aligned_cols=222 Identities=20% Similarity=0.329 Sum_probs=179.1
Q ss_pred cCCCCCceeeecCCeEEEEEEECCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEeec
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWT 317 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 317 (508)
++|...+.||+|++|.||+|...++..+|+|.+..... ..+.+.+|++++++++|||++++++++.. ...+++|||+
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~--~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~ 82 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTM--MPEAFLQEAQIMKKLRHDKLVPLYAVVSE-EPIYIVTEFM 82 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCCc--cHHHHHHHHHHHHhCCCCCeeeEEEEEcC-CCcEEEEEcC
Confidence 46888899999999999999987777899998864332 34678899999999999999999998754 5678999999
Q ss_pred CCCCHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-----------
Q 045127 318 NGGNVELWLSE---SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY----------- 383 (508)
Q Consensus 318 ~~gsL~~~l~~---~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~----------- 383 (508)
++++|.+++.. ..+++..+..++.|++.||+|||+. |++|+||||+||++++++.++|+|||.+.
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~-~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~ 161 (260)
T cd05069 83 GKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERM-NYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQ 161 (260)
T ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CEeecccCcceEEEcCCCeEEECCCccceEccCCcccccC
Confidence 99999999972 3478999999999999999999999 99999999999999999999999998742
Q ss_pred -----------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchH
Q 045127 384 -----------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMF 445 (508)
Q Consensus 384 -----------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 445 (508)
..+.++||||||+++|||++ |+.||....... .......... . ... .
T Consensus 162 ~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~--~~~~~~~~~~--------~--~~~---~ 226 (260)
T cd05069 162 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNRE--VLEQVERGYR--------M--PCP---Q 226 (260)
T ss_pred CCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHcCCC--------C--CCC---c
Confidence 12447899999999999999 899987532211 1111111110 0 000 1
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHH
Q 045127 446 DQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITR 478 (508)
Q Consensus 446 ~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 478 (508)
.....+.+++.+||+.||++||++++|.+.|++
T Consensus 227 ~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 227 GCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred ccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 224567889999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-34 Score=282.51 Aligned_cols=226 Identities=15% Similarity=0.222 Sum_probs=182.1
Q ss_pred cCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEee
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEW 316 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 316 (508)
++|+..+.||+|+||.||+|... ++..||+|.+...........+.+|+.++++++||||+++++.+......++||||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEY 80 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEee
Confidence 36788899999999999999975 78999999987554444567899999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccC----CCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCCC--------
Q 045127 317 TNGGNVELWLSES----APSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEYQ-------- 384 (508)
Q Consensus 317 ~~~gsL~~~l~~~----~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~-------- 384 (508)
+++++|..++... .+++..+..++.|++.||.|||+..+++||||||+||+++.++.++|+|||.+..
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~ 160 (286)
T cd06622 81 MDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLAKT 160 (286)
T ss_pred cCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCCcccc
Confidence 9999999998743 7899999999999999999999633999999999999999999999999986421
Q ss_pred -----------------------CCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCC
Q 045127 385 -----------------------HRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLT 441 (508)
Q Consensus 385 -----------------------~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 441 (508)
++.++|||||||++|||++|+.||....... ..... ..+.+.....
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~--~~~~~--------~~~~~~~~~~- 229 (286)
T cd06622 161 NIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYAN--IFAQL--------SAIVDGDPPT- 229 (286)
T ss_pred CCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhh--HHHHH--------HHHhhcCCCC-
Confidence 2567899999999999999999996432111 11111 1111111000
Q ss_pred cchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 442 ENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 442 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
........+.+++.+||+.+|++||+++++++.
T Consensus 230 -~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 262 (286)
T cd06622 230 -LPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEH 262 (286)
T ss_pred -CCcccCHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence 001234556788999999999999999999874
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-34 Score=276.98 Aligned_cols=224 Identities=19% Similarity=0.342 Sum_probs=184.1
Q ss_pred hcCCCCCceeeecCCeEEEEEEECCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEee
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEW 316 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 316 (508)
-++|...+.||+|+||.||+|...++..||+|.+..... ..+++.+|+.++++++|+||+++++++......+++|||
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 82 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTM--SPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEY 82 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCcc--CHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEec
Confidence 467889999999999999999988788999999975332 346789999999999999999999999988889999999
Q ss_pred cCCCCHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC----------
Q 045127 317 TNGGNVELWLSE---SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY---------- 383 (508)
Q Consensus 317 ~~~gsL~~~l~~---~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~---------- 383 (508)
+++++|.+++.. ..+++..+..++.|++.|++|||++ +++|+||||+||++++++.+|++|||.+.
T Consensus 83 ~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~-~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~ 161 (261)
T cd05034 83 MSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESR-NYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTAR 161 (261)
T ss_pred cCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCcchheEEEcCCCCEEECccccceeccchhhhhh
Confidence 999999999973 4689999999999999999999999 99999999999999999999999998632
Q ss_pred ------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcch
Q 045127 384 ------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENM 444 (508)
Q Consensus 384 ------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 444 (508)
.++.++||||||+++||+++ |+.||...... ........... ....
T Consensus 162 ~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~--~~~~~~~~~~~----------~~~~--- 226 (261)
T cd05034 162 EGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNR--EVLEQVERGYR----------MPRP--- 226 (261)
T ss_pred hccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCCC----------CCCC---
Confidence 23567999999999999999 99998643211 11111111100 0000
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHH
Q 045127 445 FDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITR 478 (508)
Q Consensus 445 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 478 (508)
......+.+++.+|++.+|++||+++++.+.|+.
T Consensus 227 ~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 227 PNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred CCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 1114567889999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-34 Score=282.03 Aligned_cols=234 Identities=14% Similarity=0.195 Sum_probs=171.0
Q ss_pred cCCCCCceeeecCCeEEEEEEE-C-CCCEEEEEEecCCCCH-HHHHHHHHHHHHHhhc---CCCCccceeeEEec-----
Q 045127 238 NGFSKKNLVGKNEGAAIYKGIL-R-DGTRVKIEIYKGDVSR-EIRDEFVEECKLLVQF---QHKNLIRVLGWNNS----- 306 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~-~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l---~h~niv~~~~~~~~----- 306 (508)
++|+..+.||+|+||.||+|.. . +++.||+|.++..... .....+.+|+.+++.+ +||||+++++++..
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 3688899999999999999986 3 4688999998643322 1234566777777665 69999999998852
Q ss_pred CCeeEEEEeecCCCCHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC
Q 045127 307 RRTRAIVTEWTNGGNVELWLS---ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY 383 (508)
Q Consensus 307 ~~~~~lv~e~~~~gsL~~~l~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~ 383 (508)
....++||||++ ++|.+++. ...+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||.+.
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~-~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~ 158 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH-RVVHRDLKPQNILVTSSGQIKLADFGLAR 158 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeCCCCHHHEEEcCCCCEEEccccceE
Confidence 346799999996 58998886 34589999999999999999999999 99999999999999999999999998642
Q ss_pred --------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhc---cchhhhhh
Q 045127 384 --------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHY---PENLQLVV 434 (508)
Q Consensus 384 --------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 434 (508)
.++.++|||||||++|||++|+.||......+ .+........ ++......
T Consensus 159 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~-~~~~i~~~~~~~~~~~~~~~~ 237 (290)
T cd07862 159 IYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD-QLGKILDVIGLPGEEDWPRDV 237 (290)
T ss_pred eccCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHH-HHHHHHHHhCCCChhhchhhh
Confidence 34567999999999999999999997543211 1111111100 00000000
Q ss_pred ---hhccc-CCcch-----HHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 435 ---DERMM-LTENM-----FDQAEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 435 ---~~~l~-~~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
...+. ..... ......+.+++.+|++.||++|||+.|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 238 ALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred cccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 00000 00000 012345678999999999999999999985
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-34 Score=277.02 Aligned_cols=218 Identities=20% Similarity=0.307 Sum_probs=176.6
Q ss_pred ceeeecCCeEEEEEEECC--C--CEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEeecCC
Q 045127 244 NLVGKNEGAAIYKGILRD--G--TRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWTNG 319 (508)
Q Consensus 244 ~~lg~G~~g~V~~~~~~~--~--~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 319 (508)
+.||+|++|.||+|.+.+ + ..||+|.+.........+.+.+|+..+++++||||+++++++.. ...+++|||+++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL 79 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence 468999999999999743 3 36999999766554567889999999999999999999999988 888999999999
Q ss_pred CCHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-------------
Q 045127 320 GNVELWLSE---SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------------- 383 (508)
Q Consensus 320 gsL~~~l~~---~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------------- 383 (508)
++|.+++.. ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||.+.
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~-~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 158 (257)
T cd05040 80 GSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESK-RFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEE 158 (257)
T ss_pred CcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhC-CccccccCcccEEEecCCEEEeccccccccccccccceeccc
Confidence 999999973 3589999999999999999999999 99999999999999999999999998632
Q ss_pred -----------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchH
Q 045127 384 -----------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMF 445 (508)
Q Consensus 384 -----------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 445 (508)
.++.++|||||||++|||++ |+.||......+ ........ ....... .
T Consensus 159 ~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~--~~~~~~~~---------~~~~~~~---~ 224 (257)
T cd05040 159 HLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQ--ILKKIDKE---------GERLERP---E 224 (257)
T ss_pred CCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHhc---------CCcCCCC---c
Confidence 33557999999999999999 999996432211 11111110 0000000 1
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHH
Q 045127 446 DQAEQGLGLGLMCTDQPTGKLPSLVQIYNMIT 477 (508)
Q Consensus 446 ~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~ 477 (508)
.....+.+++.+|++.+|++|||+.++++.|.
T Consensus 225 ~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 225 ACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred cCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 12456778999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-34 Score=276.38 Aligned_cols=223 Identities=17% Similarity=0.216 Sum_probs=179.9
Q ss_pred cCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCC----HHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEE
Q 045127 238 NGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVS----REIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAI 312 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 312 (508)
++|+..+.||+|++|.||+|.. .+++.||+|.+..... ....+.+.+|++++++++||||+++++++..++..++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 5789999999999999999986 4689999999864322 1234678899999999999999999999999999999
Q ss_pred EEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC--------
Q 045127 313 VTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY-------- 383 (508)
Q Consensus 313 v~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~-------- 383 (508)
||||+++++|.+++. ...+++..+..++.|++.||+|||+. |++||||+|+||++++++.++|+|||.+.
T Consensus 82 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~-~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~ 160 (263)
T cd06625 82 FMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSN-MIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSS 160 (263)
T ss_pred EEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEcCCCCEEEeecccceeccccccc
Confidence 999999999999987 56789999999999999999999999 99999999999999999999999998642
Q ss_pred ----------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCC
Q 045127 384 ----------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLT 441 (508)
Q Consensus 384 ----------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 441 (508)
.++.++||||||+++|||++|+.||...... .......... . ...+.
T Consensus 161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~----~~~~~~~~~~-~----~~~~~-- 229 (263)
T cd06625 161 GTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAM----AAIFKIATQP-T----NPQLP-- 229 (263)
T ss_pred cccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchH----HHHHHHhccC-C----CCCCC--
Confidence 1245789999999999999999998643211 1111100000 0 00010
Q ss_pred cchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 442 ENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 442 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
......+.+++.+||..+|.+|||+.|+++.
T Consensus 230 ---~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 230 ---SHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred ---ccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 1123456788899999999999999999864
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-34 Score=282.48 Aligned_cols=221 Identities=16% Similarity=0.224 Sum_probs=181.9
Q ss_pred CCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEeec
Q 045127 239 GFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWT 317 (508)
Q Consensus 239 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 317 (508)
.|+..+.||+|+||.||+|.. .+++.||+|.+.........+.+.+|+.++++++||||+++++++..+...++||||+
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEcc
Confidence 355668899999999999987 4578999999875554455678999999999999999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC--------------
Q 045127 318 NGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY-------------- 383 (508)
Q Consensus 318 ~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~-------------- 383 (508)
++++|.+++....+++..+..++.|+++|+.|||++ +++|+||+|+||++++++.++++|||++.
T Consensus 85 ~~~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~ 163 (277)
T cd06642 85 GGGSALDLLKPGPLEETYIATILREILKGLDYLHSE-RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVG 163 (277)
T ss_pred CCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcC-CeeccCCChheEEEeCCCCEEEccccccccccCcchhhhcccC
Confidence 999999999888899999999999999999999999 99999999999999999999999998642
Q ss_pred -------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHHHH
Q 045127 384 -------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQAEQ 450 (508)
Q Consensus 384 -------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 450 (508)
.++.++|||||||++|||++|+.||....... ........ ..+.+. ......
T Consensus 164 ~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~--~~~~~~~~--------~~~~~~-----~~~~~~ 228 (277)
T cd06642 164 TPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMR--VLFLIPKN--------SPPTLE-----GQYSKP 228 (277)
T ss_pred cccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhh--HHhhhhcC--------CCCCCC-----cccCHH
Confidence 23557999999999999999999986432211 11111000 011110 122456
Q ss_pred HHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 451 GLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 451 l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
+.+++.+||+.+|++||++.++++.
T Consensus 229 ~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 229 FKEFVEACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred HHHHHHHHccCCcccCcCHHHHHHh
Confidence 7789999999999999999999984
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-34 Score=275.67 Aligned_cols=221 Identities=14% Similarity=0.135 Sum_probs=180.1
Q ss_pred CCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEeec
Q 045127 239 GFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWT 317 (508)
Q Consensus 239 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 317 (508)
+|+..+.||+|+||.||++... ++..+|+|.++........+.+.+|+.+++.++||||+++++.+..++..+++|||+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC 80 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence 4778899999999999999974 689999999865544556678889999999999999999999999999999999999
Q ss_pred CCCCHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-----------
Q 045127 318 NGGNVELWLS---ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY----------- 383 (508)
Q Consensus 318 ~~gsL~~~l~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~----------- 383 (508)
++|+|.+++. ...+++..+..++.|++.||.|||++ |++|+||||+||++++++.++++|||.+.
T Consensus 81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~-~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~ 159 (255)
T cd08219 81 DGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEK-RVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYACT 159 (255)
T ss_pred CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhC-CcccCCCCcceEEECCCCcEEEcccCcceeeccccccccc
Confidence 9999999886 34578999999999999999999999 99999999999999999999999998642
Q ss_pred ----------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHH
Q 045127 384 ----------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQ 447 (508)
Q Consensus 384 ----------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 447 (508)
..+.++||||||+++|+|++|+.||..... ............. + +. ...
T Consensus 160 ~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~-----~~~~~~~~~~~~~----~-~~-----~~~ 224 (255)
T cd08219 160 YVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSW-----KNLILKVCQGSYK----P-LP-----SHY 224 (255)
T ss_pred ccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCH-----HHHHHHHhcCCCC----C-CC-----ccc
Confidence 245679999999999999999999974321 1111111100000 0 00 112
Q ss_pred HHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 448 AEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 448 ~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
...+.+++.+||+.||++|||+.|++..
T Consensus 225 ~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 225 SYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred CHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 3456788999999999999999999864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-34 Score=278.05 Aligned_cols=228 Identities=17% Similarity=0.217 Sum_probs=180.6
Q ss_pred HHHhhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeE
Q 045127 233 LKAATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRA 311 (508)
Q Consensus 233 l~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 311 (508)
++.+++++.....||+|+||.||+|.. .++..|++|.+.... ....+.+.+|+.++++++|+||+++++++..++..+
T Consensus 3 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 81 (268)
T cd06624 3 YEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERD-SRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFK 81 (268)
T ss_pred cccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCC-HHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEE
Confidence 455677777788999999999999996 467889999986543 335678999999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHhcc--CCC--CHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecC-CCceEEeeccCCC---
Q 045127 312 IVTEWTNGGNVELWLSE--SAP--SWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTD-NLEPLISRFKIEY--- 383 (508)
Q Consensus 312 lv~e~~~~gsL~~~l~~--~~l--~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~-~~~~kl~Dfg~~~--- 383 (508)
++|||+++++|.+++.. ..+ ++..+..++.|++.||+|||+. ||+||||||+||+++. ++.++|+|||.+.
T Consensus 82 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~ 160 (268)
T cd06624 82 IFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDN-QIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLA 160 (268)
T ss_pred EEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHC-CEeecCCCHHHEEEcCCCCeEEEecchhheecc
Confidence 99999999999999873 345 7888899999999999999999 9999999999999986 6799999997531
Q ss_pred --------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhc
Q 045127 384 --------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDER 437 (508)
Q Consensus 384 --------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (508)
.++.++||||||+++|+|++|+.||......... .+...... ..+.
T Consensus 161 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~--~~~~~~~~------~~~~ 232 (268)
T cd06624 161 GINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAA--MFKVGMFK------IHPE 232 (268)
T ss_pred cCCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhh--Hhhhhhhc------cCCC
Confidence 1456789999999999999999998643221111 01000000 0011
Q ss_pred ccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 438 MMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 438 l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
+. ......+.+++.+||+.+|++|||+.|++..
T Consensus 233 ~~-----~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 265 (268)
T cd06624 233 IP-----ESLSAEAKNFILRCFEPDPDKRASAHDLLQD 265 (268)
T ss_pred CC-----cccCHHHHHHHHHHcCCCchhCCCHHHHHhC
Confidence 10 1123457788999999999999999999863
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-34 Score=279.17 Aligned_cols=222 Identities=15% Similarity=0.209 Sum_probs=184.6
Q ss_pred cCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEee
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEW 316 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 316 (508)
+.|+..+.||+|+||.||+|.+. ++..||+|.+...........+.+|+.++++++||||+++++++.++...++||||
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEY 83 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEec
Confidence 45777899999999999999974 58899999987555455677899999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC--------------
Q 045127 317 TNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE-------------- 382 (508)
Q Consensus 317 ~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~-------------- 382 (508)
+++|+|.+++....+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++++|||.+
T Consensus 84 ~~~~~L~~~i~~~~l~~~~~~~~~~~l~~~l~~lh~~-~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 162 (277)
T cd06640 84 LGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSE-KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV 162 (277)
T ss_pred CCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC-CccCcCCChhhEEEcCCCCEEEcccccceeccCCcccccccc
Confidence 9999999999888899999999999999999999999 9999999999999999999999999864
Q ss_pred -------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHHH
Q 045127 383 -------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQAE 449 (508)
Q Consensus 383 -------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 449 (508)
...+.++|||||||++|||++|+.||........ ........ .+. .......
T Consensus 163 ~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~--~~~~~~~~--------~~~-----~~~~~~~ 227 (277)
T cd06640 163 GTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRV--LFLIPKNN--------PPT-----LTGEFSK 227 (277)
T ss_pred CcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhH--hhhhhcCC--------CCC-----CchhhhH
Confidence 1235679999999999999999999875432110 00000000 011 1122356
Q ss_pred HHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 450 QGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 450 ~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
.+.+++.+||+.+|++||++.++++.
T Consensus 228 ~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 228 PFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred HHHHHHHHHcccCcccCcCHHHHHhC
Confidence 67889999999999999999999876
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-34 Score=275.39 Aligned_cols=222 Identities=18% Similarity=0.334 Sum_probs=174.2
Q ss_pred ceeeecCCeEEEEEEEC----CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEe-cCCeeEEEEeecC
Q 045127 244 NLVGKNEGAAIYKGILR----DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNN-SRRTRAIVTEWTN 318 (508)
Q Consensus 244 ~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-~~~~~~lv~e~~~ 318 (508)
+.||+|+||.||+|.+. ++..||+|.+.........+.+.+|+.+++.++||||+++++++. .+...+++|||++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 46899999999999863 245799999865444455778899999999999999999999776 4556799999999
Q ss_pred CCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-------------
Q 045127 319 GGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------------- 383 (508)
Q Consensus 319 ~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------------- 383 (508)
+|+|.+++. ....++..+..++.|+++||+|||+. +++||||||+||++++++.+||+|||.+.
T Consensus 81 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 159 (262)
T cd05058 81 HGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASK-KFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNH 159 (262)
T ss_pred CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC-CccccccCcceEEEcCCCcEEECCccccccccCCcceeeccc
Confidence 999999987 34567888899999999999999999 99999999999999999999999998742
Q ss_pred ------------------CCCCcchhhHHHHHHHHHHhC-CCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcch
Q 045127 384 ------------------QHRSTKYVYKFGLFLLEMITN-RRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENM 444 (508)
Q Consensus 384 ------------------~~~~~~Dv~SlGvil~elltg-~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 444 (508)
.++.++|||||||++|||++| ..||.... ...+...+.... .....
T Consensus 160 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~--~~~~~~~~~~~~----------~~~~~--- 224 (262)
T cd05058 160 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVD--SFDITVYLLQGR----------RLLQP--- 224 (262)
T ss_pred ccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCC--HHHHHHHHhcCC----------CCCCC---
Confidence 123478999999999999995 55665321 111111111100 00000
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHh
Q 045127 445 FDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYK 481 (508)
Q Consensus 445 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~ 481 (508)
......+.+++.+||+.+|++||++.|+++.|+++..
T Consensus 225 ~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~~ 261 (262)
T cd05058 225 EYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIFS 261 (262)
T ss_pred CcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence 1123467789999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-34 Score=293.56 Aligned_cols=224 Identities=11% Similarity=0.112 Sum_probs=177.5
Q ss_pred cCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCC--CHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEE
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDV--SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVT 314 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 314 (508)
++|+..+.||+|+||.||+|+.. +++.||||++.... .......+.+|+.+++.++||||+++++++.++...++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 47889999999999999999974 68999999996432 1234566889999999999999999999999999999999
Q ss_pred eecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC----------
Q 045127 315 EWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY---------- 383 (508)
Q Consensus 315 e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~---------- 383 (508)
||+++|+|.+++. ...+++..+..++.|++.||+|||+. ||+||||||+|||++.++.+||+|||++.
T Consensus 81 E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~-~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~ 159 (364)
T cd05599 81 EYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKL-GYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEF 159 (364)
T ss_pred CCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEeccCCHHHeEECCCCCEEEeecccceeccccccccc
Confidence 9999999999987 56789999999999999999999999 99999999999999999999999998642
Q ss_pred -------------------------------------------------------CCCCcchhhHHHHHHHHHHhCCCCC
Q 045127 384 -------------------------------------------------------QHRSTKYVYKFGLFLLEMITNRRPL 408 (508)
Q Consensus 384 -------------------------------------------------------~~~~~~Dv~SlGvil~elltg~~P~ 408 (508)
.++.++|||||||++|||++|..||
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~Pf 239 (364)
T cd05599 160 YRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPF 239 (364)
T ss_pred cccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCCC
Confidence 2356799999999999999999999
Q ss_pred cccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCC---HHHHHHH
Q 045127 409 EEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPS---LVQIYNM 475 (508)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs---~~evl~~ 475 (508)
....... ........ ...+..... ......+.+++.+|+. +|.+|++ +.|+++.
T Consensus 240 ~~~~~~~-----~~~~i~~~------~~~~~~~~~-~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h 296 (364)
T cd05599 240 CSDNPQE-----TYRKIINW------KETLQFPDE-VPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSH 296 (364)
T ss_pred CCCCHHH-----HHHHHHcC------CCccCCCCC-CCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcC
Confidence 7533211 11111000 000000000 0113345667777886 8999997 9998874
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-35 Score=299.89 Aligned_cols=226 Identities=20% Similarity=0.280 Sum_probs=190.9
Q ss_pred CCCCceeeecCCeEEEEEEE-CCC----CEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEE
Q 045127 240 FSKKNLVGKNEGAAIYKGIL-RDG----TRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVT 314 (508)
Q Consensus 240 ~~~~~~lg~G~~g~V~~~~~-~~~----~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 314 (508)
.+..++||+|+||+||+|.| +.| .+||+|++......+...++..|+-.|.+++|||+++++|++..+. ..||+
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvt 776 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVT 776 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHH
Confidence 34568999999999999997 444 4799999987777777889999999999999999999999998765 78999
Q ss_pred eecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC----------
Q 045127 315 EWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE---------- 382 (508)
Q Consensus 315 e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~---------- 382 (508)
+||+.|+|.++++ +..+.....+.|..|||+|+.|||.+ +++||||-.+|||+.....+||.|||++
T Consensus 777 q~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~q-rlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey 855 (1177)
T KOG1025|consen 777 QLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQ-RLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEY 855 (1177)
T ss_pred HhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhc-chhhhhhhhhheeecCCCeEEEEecchhhccCcccccc
Confidence 9999999999998 67888999999999999999999999 9999999999999999999999999874
Q ss_pred -------------------CCCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCc
Q 045127 383 -------------------YQHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTE 442 (508)
Q Consensus 383 -------------------~~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 442 (508)
+.++.++|||||||++||++| |..|++....++ +.+.++.. .++..+
T Consensus 856 ~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~e--I~dlle~g----------eRLsqP- 922 (1177)
T KOG1025|consen 856 SAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEE--IPDLLEKG----------ERLSQP- 922 (1177)
T ss_pred cccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHH--hhHHHhcc----------ccCCCC-
Confidence 467889999999999999999 999998655332 11111111 112222
Q ss_pred chHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhh
Q 045127 443 NMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKS 482 (508)
Q Consensus 443 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 482 (508)
.-+...+..++.+||..|++.||+++++...+.++...
T Consensus 923 --piCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ard 960 (1177)
T KOG1025|consen 923 --PICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARD 960 (1177)
T ss_pred --CCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcC
Confidence 23466777889999999999999999999999888654
|
|
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-34 Score=288.21 Aligned_cols=224 Identities=13% Similarity=0.104 Sum_probs=176.9
Q ss_pred CCCCCceeeecCCeEEEEEEE----CCCCEEEEEEecCCC---CHHHHHHHHHHHHHHhhc-CCCCccceeeEEecCCee
Q 045127 239 GFSKKNLVGKNEGAAIYKGIL----RDGTRVKIEIYKGDV---SREIRDEFVEECKLLVQF-QHKNLIRVLGWNNSRRTR 310 (508)
Q Consensus 239 ~~~~~~~lg~G~~g~V~~~~~----~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 310 (508)
+|+..+.||+|+||.||+++. .+++.||+|++.... .....+.+..|+.+++.+ +||+|+++++++......
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 478889999999999999985 357899999986422 122345678899999999 599999999999999999
Q ss_pred EEEEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC------
Q 045127 311 AIVTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------ 383 (508)
Q Consensus 311 ~lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------ 383 (508)
++||||+++|+|.+++. ...+++..+..++.||+.||+|||++ ||+||||||+|||++.++.+||+|||++.
T Consensus 81 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~ 159 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKL-GIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEE 159 (332)
T ss_pred EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC-CcEecCCCHHHeEECCCCCEEEeeCcCCccccccC
Confidence 99999999999999987 56789999999999999999999999 99999999999999999999999998642
Q ss_pred -----------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccC
Q 045127 384 -----------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMML 440 (508)
Q Consensus 384 -----------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 440 (508)
.++.++|||||||++|||++|+.||....... ........... .++.+.
T Consensus 160 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~-~~~~~~~~~~~------~~~~~~- 231 (332)
T cd05614 160 KERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERN-TQSEVSRRILK------CDPPFP- 231 (332)
T ss_pred CCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCC-CHHHHHHHHhc------CCCCCC-
Confidence 13457899999999999999999996432211 11111111100 011111
Q ss_pred CcchHHHHHHHHHHHHhcCCCCCCCCC-----CHHHHHHH
Q 045127 441 TENMFDQAEQGLGLGLMCTDQPTGKLP-----SLVQIYNM 475 (508)
Q Consensus 441 ~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~ 475 (508)
......+.+++.+|++.||++|| +++++++.
T Consensus 232 ----~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 267 (332)
T cd05614 232 ----SFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEH 267 (332)
T ss_pred ----CCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcC
Confidence 01234567788999999999999 77788754
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=294.81 Aligned_cols=228 Identities=12% Similarity=0.110 Sum_probs=180.1
Q ss_pred HHHhhcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCC--CHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCe
Q 045127 233 LKAATNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDV--SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRT 309 (508)
Q Consensus 233 l~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 309 (508)
+....++|+..+.||+|+||.||++... +++.+|+|++.... .......+.+|+.+++.++||||+++++++.++..
T Consensus 38 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~ 117 (370)
T cd05621 38 LQMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKY 117 (370)
T ss_pred cCCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCE
Confidence 3445678999999999999999999974 58899999985321 22235568899999999999999999999999999
Q ss_pred eEEEEeecCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC------
Q 045127 310 RAIVTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------ 383 (508)
Q Consensus 310 ~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------ 383 (508)
.++||||+++|+|.+++....+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||++.
T Consensus 118 ~~lv~Ey~~gg~L~~~l~~~~~~~~~~~~~~~qil~aL~~LH~~-~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~ 196 (370)
T cd05621 118 LYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSM-GLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETG 196 (370)
T ss_pred EEEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCCHHHEEECCCCCEEEEecccceecccCC
Confidence 99999999999999999877899999999999999999999999 99999999999999999999999998632
Q ss_pred --------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhc
Q 045127 384 --------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDER 437 (508)
Q Consensus 384 --------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (508)
.++.++||||+||++|||++|+.||...... ..... +.+..
T Consensus 197 ~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~-----~~~~~--------i~~~~ 263 (370)
T cd05621 197 MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLV-----GTYSK--------IMDHK 263 (370)
T ss_pred ceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHH-----HHHHH--------HHhCC
Confidence 1456899999999999999999999743211 11111 11100
Q ss_pred --ccCCcchHHHHHHHHHHHHhcCCCCCCC--CCCHHHHHHH
Q 045127 438 --MMLTENMFDQAEQGLGLGLMCTDQPTGK--LPSLVQIYNM 475 (508)
Q Consensus 438 --l~~~~~~~~~~~~l~~l~~~Cl~~dP~~--RPs~~evl~~ 475 (508)
+... ........+.+++..|+..+|.+ ||++.|+++.
T Consensus 264 ~~~~~p-~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 264 NSLNFP-EDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred cccCCC-CcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 1000 00112344556777788755543 8999999886
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-34 Score=277.82 Aligned_cols=222 Identities=20% Similarity=0.287 Sum_probs=179.0
Q ss_pred CCCCCceeeecCCeEEEEEEECCCCEEEEEEecCCCC-----HHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEE
Q 045127 239 GFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVS-----REIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIV 313 (508)
Q Consensus 239 ~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 313 (508)
+|+..+.||+|+||.||+|...+++.+|+|.+..... ......+.+|++++++++|+||+++++++.+....+++
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 4778899999999999999988899999999864321 22346689999999999999999999999999999999
Q ss_pred EeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC---------
Q 045127 314 TEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY--------- 383 (508)
Q Consensus 314 ~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~--------- 383 (508)
|||+++++|.+++. ...+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||.+.
T Consensus 81 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~ 159 (265)
T cd06631 81 MEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNN-CVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHG 159 (265)
T ss_pred EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCcCHHhEEECCCCeEEeccchhhHhhhhccccc
Confidence 99999999999987 46789999999999999999999999 99999999999999999999999997532
Q ss_pred ------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhccc
Q 045127 384 ------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMM 439 (508)
Q Consensus 384 ------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 439 (508)
.++.++||||||+++|+|++|+.||........ ... ... .. ...+.+.
T Consensus 160 ~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~-~~~-~~~--~~----~~~~~~~ 231 (265)
T cd06631 160 THSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAA-MFY-IGA--HR----GLMPRLP 231 (265)
T ss_pred cccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHH-HHH-hhh--cc----CCCCCCC
Confidence 124679999999999999999999974321110 000 000 00 0001111
Q ss_pred CCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 440 LTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 440 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
......+.+++.+||+.+|++||++.|+++
T Consensus 232 -----~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 232 -----DSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred -----CCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 112455678899999999999999999875
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-34 Score=293.37 Aligned_cols=229 Identities=16% Similarity=0.182 Sum_probs=176.0
Q ss_pred cCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEee
Q 045127 238 NGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEW 316 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 316 (508)
++|+..+.||+|+||.||+|.. .+++.||+|... ...+.+|++++++++||||+++++++......++|||+
T Consensus 92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~-------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~ 164 (391)
T PHA03212 92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ-------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPR 164 (391)
T ss_pred CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh-------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEec
Confidence 5799999999999999999997 568999999753 24567899999999999999999999999999999999
Q ss_pred cCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC------------
Q 045127 317 TNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------------ 383 (508)
Q Consensus 317 ~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------------ 383 (508)
+. ++|..++. ...+++.++..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++.
T Consensus 165 ~~-~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~-~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~~ 242 (391)
T PHA03212 165 YK-TDLYCYLAAKRNIAICDILAIERSVLRAIQYLHEN-RIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANKYYG 242 (391)
T ss_pred CC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCChHhEEEcCCCCEEEEeCCccccccccccccccc
Confidence 95 68888876 56789999999999999999999999 99999999999999999999999999752
Q ss_pred ----------------CCCCcchhhHHHHHHHHHHhCCCCCccccc------CcccHHHHHHHhc------cch----hh
Q 045127 384 ----------------QHRSTKYVYKFGLFLLEMITNRRPLEEFER------GEAGFIEYIRMHY------PEN----LQ 431 (508)
Q Consensus 384 ----------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~------~~~~~~~~~~~~~------~~~----~~ 431 (508)
.++.++|||||||++|||++|+.||..... ....+...+.... +.. +.
T Consensus 243 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~ 322 (391)
T PHA03212 243 WAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLD 322 (391)
T ss_pred ccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHH
Confidence 235678999999999999999988753221 0111111111100 000 01
Q ss_pred hhh---hhcc-cC---C---cchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 432 LVV---DERM-ML---T---ENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 432 ~~~---~~~l-~~---~---~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
... .... .. . .........+.+++.+|++.||.+|||++|+++.
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~h 376 (391)
T PHA03212 323 EIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDF 376 (391)
T ss_pred HHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 111 0000 00 0 0001224567889999999999999999999863
|
|
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-34 Score=282.42 Aligned_cols=224 Identities=13% Similarity=0.114 Sum_probs=177.8
Q ss_pred CCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCH--HHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEe
Q 045127 239 GFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSR--EIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTE 315 (508)
Q Consensus 239 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 315 (508)
.|+..+.||+|+||.||++.. .+++.||+|.+...... .....+.+|+.++++++||||+++++.+..++..++|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 477889999999999999997 46899999998643221 234567889999999999999999999999999999999
Q ss_pred ecCCCCHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC---------
Q 045127 316 WTNGGNVELWLS---ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY--------- 383 (508)
Q Consensus 316 ~~~~gsL~~~l~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~--------- 383 (508)
|+++|+|.+++. ...+++..+..++.|++.||.|||+. +++||||||+||++++++.++|+|||.+.
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~ 159 (285)
T cd05605 81 LMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRE-RIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGETIR 159 (285)
T ss_pred ccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHC-CcEecCCCHHHEEECCCCCEEEeeCCCceecCCCCccc
Confidence 999999998875 34689999999999999999999999 99999999999999999999999998642
Q ss_pred -----------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHH
Q 045127 384 -----------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFD 446 (508)
Q Consensus 384 -----------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 446 (508)
.++.++||||+||++|||++|+.||....... ....+... +....... ...
T Consensus 160 ~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~--~~~~~~~~--------~~~~~~~~--~~~ 227 (285)
T cd05605 160 GRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKV--KREEVERR--------VKEDQEEY--SEK 227 (285)
T ss_pred cccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhh--HHHHHHHH--------hhhccccc--Ccc
Confidence 23467899999999999999999997532111 00111111 10000000 011
Q ss_pred HHHHHHHHHHhcCCCCCCCCC-----CHHHHHHH
Q 045127 447 QAEQGLGLGLMCTDQPTGKLP-----SLVQIYNM 475 (508)
Q Consensus 447 ~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~ 475 (508)
....+.+++.+||+.||++|| +++++++.
T Consensus 228 ~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 228 FSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred cCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence 244577899999999999999 88888664
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-34 Score=283.10 Aligned_cols=230 Identities=19% Similarity=0.285 Sum_probs=182.8
Q ss_pred hcCCCCCceeeecCCeEEEEEEE-CCCC----EEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeE
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGIL-RDGT----RVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRA 311 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~----~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 311 (508)
.++|+..+.||+|+||.||+|.+ .++. .||+|.+...........+.+|+.++++++||||+++++++... ..+
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~ 84 (303)
T cd05110 6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQ 84 (303)
T ss_pred hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cce
Confidence 35678889999999999999986 3443 57899887655554556789999999999999999999998754 467
Q ss_pred EEEeecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC------
Q 045127 312 IVTEWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------ 383 (508)
Q Consensus 312 lv~e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------ 383 (508)
+++||+++|+|.+++. ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||.+.
T Consensus 85 ~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~-~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~ 163 (303)
T cd05110 85 LVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEER-RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDE 163 (303)
T ss_pred eeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhc-CeeccccccceeeecCCCceEEccccccccccCcc
Confidence 9999999999999987 33689999999999999999999999 99999999999999999999999998642
Q ss_pred -----------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhccc
Q 045127 384 -----------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMM 439 (508)
Q Consensus 384 -----------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 439 (508)
.++.++||||||+++||+++ |+.||..... .....++.... ...
T Consensus 164 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~--~~~~~~~~~~~----------~~~ 231 (303)
T cd05110 164 KEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPT--REIPDLLEKGE----------RLP 231 (303)
T ss_pred cccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHHCCC----------CCC
Confidence 22457899999999999997 8999864321 11222221110 010
Q ss_pred CCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhC
Q 045127 440 LTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSC 483 (508)
Q Consensus 440 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 483 (508)
.. ......+.+++..||..+|++||+++++++.|.++....
T Consensus 232 ~~---~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~~ 272 (303)
T cd05110 232 QP---PICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARDP 272 (303)
T ss_pred CC---CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhch
Confidence 00 112345778899999999999999999999999886553
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-35 Score=292.94 Aligned_cols=237 Identities=19% Similarity=0.306 Sum_probs=193.9
Q ss_pred CCCHHHHHHhhcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEe
Q 045127 227 KFTTWMLKAATNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNN 305 (508)
Q Consensus 227 ~~~~~~l~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 305 (508)
..+-+|+++. +.....+||.|.||.||.|.|+ ..-.||||.++.+.. ..++|..|..+|+.++|||+|+++|+|.
T Consensus 258 n~DkWEmeRt--dItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtM--eveEFLkEAAvMKeikHpNLVqLLGVCT 333 (1157)
T KOG4278|consen 258 NADKWEMERT--DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHPNLVQLLGVCT 333 (1157)
T ss_pred Ccchhhccch--heeeeeccCCCcccceeeeeeeccceeeehhhhhhcch--hHHHHHHHHHHHHhhcCccHHHHhhhhc
Confidence 3344454443 4556689999999999999995 467899999976544 4789999999999999999999999999
Q ss_pred cCCeeEEEEeecCCCCHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC
Q 045127 306 SRRTRAIVTEWTNGGNVELWLS---ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE 382 (508)
Q Consensus 306 ~~~~~~lv~e~~~~gsL~~~l~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~ 382 (508)
.+..+|||+|||..|+|.+|++ ...++.-..+.++.||..|+.||..+ ++|||||...|+|+.++..+|++|||++
T Consensus 334 ~EpPFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkk-nFIHRDLAARNCLVgEnhiVKvADFGLs 412 (1157)
T KOG4278|consen 334 HEPPFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKK-NFIHRDLAARNCLVGENHIVKVADFGLS 412 (1157)
T ss_pred cCCCeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHh-hhhhhhhhhhhccccccceEEeeccchh
Confidence 9999999999999999999998 45567777889999999999999999 9999999999999999999999999985
Q ss_pred C----------------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhh
Q 045127 383 Y----------------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLV 433 (508)
Q Consensus 383 ~----------------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (508)
+ .++.|+|||+|||+|||+.| |..||.+.. +.+ +.++
T Consensus 413 RlMtgDTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGid-----lSq---------VY~L 478 (1157)
T KOG4278|consen 413 RLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGID-----LSQ---------VYGL 478 (1157)
T ss_pred hhhcCCceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCcc-----HHH---------HHHH
Confidence 3 23568999999999999998 899987543 111 1222
Q ss_pred hhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhC
Q 045127 434 VDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSC 483 (508)
Q Consensus 434 ~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 483 (508)
+..... ......+...+.+++..||+++|++||++.|+-+.++.+..+.
T Consensus 479 LEkgyR-M~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~~s 527 (1157)
T KOG4278|consen 479 LEKGYR-MDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFSSS 527 (1157)
T ss_pred Hhcccc-ccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhccc
Confidence 222221 1111245678889999999999999999999999998776543
|
|
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=295.99 Aligned_cols=224 Identities=11% Similarity=0.063 Sum_probs=176.4
Q ss_pred cCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCC--CHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEE
Q 045127 238 NGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDV--SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVT 314 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 314 (508)
++|+..+.||+|+||.||+|.. .+++.||||++.... .....+.+.+|++++++++||||+++++++.+....|+||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 4788899999999999999987 568999999985422 2234567889999999999999999999999999999999
Q ss_pred eecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC----------
Q 045127 315 EWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY---------- 383 (508)
Q Consensus 315 e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~---------- 383 (508)
||+++|+|.+++. ...+++..+..++.|++.||+|||+. ||+||||||+|||++.++.+||+|||++.
T Consensus 81 E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~-givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~ 159 (377)
T cd05629 81 EFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKL-GFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAY 159 (377)
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHHHEEECCCCCEEEeeccccccccccccccc
Confidence 9999999999987 56789999999999999999999999 99999999999999999999999999652
Q ss_pred ----------------------------------------------------------------CCCCcchhhHHHHHHH
Q 045127 384 ----------------------------------------------------------------QHRSTKYVYKFGLFLL 399 (508)
Q Consensus 384 ----------------------------------------------------------------~~~~~~Dv~SlGvil~ 399 (508)
.++.++|||||||++|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ 239 (377)
T cd05629 160 YQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMF 239 (377)
T ss_pred ccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchhhh
Confidence 2356799999999999
Q ss_pred HHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCC---CCHHHHHHH
Q 045127 400 EMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKL---PSLVQIYNM 475 (508)
Q Consensus 400 elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~R---Ps~~evl~~ 475 (508)
||++|+.||....... ........ ...+... ........+.+++.+|+. +|.+| +++.|+++.
T Consensus 240 elltG~~Pf~~~~~~~-----~~~~i~~~------~~~~~~p-~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~h 305 (377)
T cd05629 240 ECLIGWPPFCSENSHE-----TYRKIINW------RETLYFP-DDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSH 305 (377)
T ss_pred hhhcCCCCCCCCCHHH-----HHHHHHcc------CCccCCC-CCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcC
Confidence 9999999996432111 11110000 0001000 000113456677888887 66665 699998875
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-34 Score=274.00 Aligned_cols=218 Identities=26% Similarity=0.407 Sum_probs=179.8
Q ss_pred ceeeecCCeEEEEEEECC----CCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEeecCC
Q 045127 244 NLVGKNEGAAIYKGILRD----GTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWTNG 319 (508)
Q Consensus 244 ~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 319 (508)
+.||+|+||.||+|.... +..|++|.++........+.+.+|++.++.++|+||+++++++......+++|||+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 468999999999999743 7899999997665554578899999999999999999999999999999999999999
Q ss_pred CCHHHHhcc----------CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC------
Q 045127 320 GNVELWLSE----------SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------ 383 (508)
Q Consensus 320 gsL~~~l~~----------~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------ 383 (508)
++|.+++.. ..+++..+..++.|++.||+|||++ +++||||||+||+++.++.+|++|||.+.
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~-~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~ 159 (262)
T cd00192 81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK-KFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDD 159 (262)
T ss_pred CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC-CcccCccCcceEEECCCCcEEEccccccccccccc
Confidence 999999983 6789999999999999999999999 99999999999999999999999997642
Q ss_pred -----------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhccc
Q 045127 384 -----------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMM 439 (508)
Q Consensus 384 -----------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 439 (508)
.++.++||||+|+++|||++ |..||...... .+....... ....
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~~~~~~----------~~~~ 227 (262)
T cd00192 160 YYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNE--EVLEYLRKG----------YRLP 227 (262)
T ss_pred ccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHH--HHHHHHHcC----------CCCC
Confidence 23457899999999999999 69999754211 111111110 0000
Q ss_pred CCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHH
Q 045127 440 LTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMIT 477 (508)
Q Consensus 440 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~ 477 (508)
.. ......+.+++.+||+.+|++|||+.|+++.|+
T Consensus 228 ~~---~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 228 KP---EYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred CC---ccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 01 112456788999999999999999999998874
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-34 Score=277.06 Aligned_cols=228 Identities=17% Similarity=0.300 Sum_probs=183.7
Q ss_pred cCCCCCceeeecCCeEEEEEEECC----CCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEE
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILRD----GTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIV 313 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 313 (508)
++|...+.||+|+||.||+|.+.+ ...|++|...........+.+.+|+.++++++||||+++++++.. ...++|
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv 84 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIV 84 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEE
Confidence 457788999999999999998643 347899998765545567789999999999999999999998875 456899
Q ss_pred EeecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC--------
Q 045127 314 TEWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY-------- 383 (508)
Q Consensus 314 ~e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~-------- 383 (508)
|||+++|+|.+++. ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.+|++|||.+.
T Consensus 85 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~-~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~ 163 (270)
T cd05056 85 MELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESK-RFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESYY 163 (270)
T ss_pred EEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeccccChheEEEecCCCeEEccCceeeecccccce
Confidence 99999999999997 34589999999999999999999999 99999999999999999999999997631
Q ss_pred --------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCc
Q 045127 384 --------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTE 442 (508)
Q Consensus 384 --------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 442 (508)
.++.++||||||+++||+++ |..||......+ ......... .+...
T Consensus 164 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~--~~~~~~~~~----------~~~~~- 230 (270)
T cd05056 164 KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNND--VIGRIENGE----------RLPMP- 230 (270)
T ss_pred ecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHH--HHHHHHcCC----------cCCCC-
Confidence 23467899999999999986 999997543221 111111100 00001
Q ss_pred chHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhh
Q 045127 443 NMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKS 482 (508)
Q Consensus 443 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 482 (508)
......+.+++.+|+..+|++|||+.++++.|+.+..+
T Consensus 231 --~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~ 268 (270)
T cd05056 231 --PNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQE 268 (270)
T ss_pred --CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 11234677889999999999999999999999988654
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-34 Score=287.56 Aligned_cols=215 Identities=15% Similarity=0.176 Sum_probs=172.8
Q ss_pred ceeeecCCeEEEEEEEC-CCCEEEEEEecCCC--CHHHHHHHHHHHHHHhhc-CCCCccceeeEEecCCeeEEEEeecCC
Q 045127 244 NLVGKNEGAAIYKGILR-DGTRVKIEIYKGDV--SREIRDEFVEECKLLVQF-QHKNLIRVLGWNNSRRTRAIVTEWTNG 319 (508)
Q Consensus 244 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~ 319 (508)
+.||+|+||.||+|+.. +++.||+|++.... .......+..|.+++..+ +||||+++++++..++..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 46899999999999974 57899999996432 223456677899988876 799999999999999999999999999
Q ss_pred CCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC---------------
Q 045127 320 GNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY--------------- 383 (508)
Q Consensus 320 gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~--------------- 383 (508)
|+|..++. ...+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++.
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt 159 (321)
T cd05591 81 GDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRH-GVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTTFCGT 159 (321)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHHeEECCCCCEEEeecccceecccCCccccccccC
Confidence 99998886 66789999999999999999999999 99999999999999999999999998632
Q ss_pred ------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHHHHH
Q 045127 384 ------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQAEQG 451 (508)
Q Consensus 384 ------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l 451 (508)
.++.++|||||||++|||++|+.||....... . ...... ....... .....+
T Consensus 160 ~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~--~---~~~i~~--------~~~~~p~---~~~~~~ 223 (321)
T cd05591 160 PDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDD--L---FESILH--------DDVLYPV---WLSKEA 223 (321)
T ss_pred ccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHH--H---HHHHHc--------CCCCCCC---CCCHHH
Confidence 34568999999999999999999997432211 1 111111 1110000 113456
Q ss_pred HHHHHhcCCCCCCCCC-------CHHHHHHH
Q 045127 452 LGLGLMCTDQPTGKLP-------SLVQIYNM 475 (508)
Q Consensus 452 ~~l~~~Cl~~dP~~RP-------s~~evl~~ 475 (508)
.+++.+|++.||++|| +++++++.
T Consensus 224 ~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~h 254 (321)
T cd05591 224 VSILKAFMTKNPNKRLGCVASQGGEDAIKQH 254 (321)
T ss_pred HHHHHHHhccCHHHcCCCCCCCCCHHHHhcC
Confidence 7888999999999999 88888754
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-34 Score=278.97 Aligned_cols=225 Identities=17% Similarity=0.288 Sum_probs=181.5
Q ss_pred cCCCCCceeeecCCeEEEEEEEC------CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeE
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILR------DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRA 311 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 311 (508)
++|+..+.||+|+||.||+|+.. +...|++|.+.........+.+.+|++++++++||||+++++++......+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY 84 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence 57888999999999999999963 246799999865444445678999999999999999999999999888999
Q ss_pred EEEeecCCCCHHHHhcc-C---------CCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccC
Q 045127 312 IVTEWTNGGNVELWLSE-S---------APSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKI 381 (508)
Q Consensus 312 lv~e~~~~gsL~~~l~~-~---------~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~ 381 (508)
+||||+++|+|.+++.. . .+++..+..++.|++.||+|||+. +++||||||+||+++.++.++++|||.
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~-~i~H~dlkp~Nili~~~~~~~l~~~~~ 163 (275)
T cd05046 85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA-RFVHRDLAARNCLVSSQREVKVSLLSL 163 (275)
T ss_pred EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc-CcccCcCccceEEEeCCCcEEEccccc
Confidence 99999999999999972 2 589999999999999999999999 999999999999999999999999986
Q ss_pred CC----------------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhh
Q 045127 382 EY----------------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQL 432 (508)
Q Consensus 382 ~~----------------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (508)
+. ..+.++||||||+++|++++ |..||...... .+....... ...
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~--~~~~~~~~~---~~~- 237 (275)
T cd05046 164 SKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDE--EVLNRLQAG---KLE- 237 (275)
T ss_pred ccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchH--HHHHHHHcC---CcC-
Confidence 42 23456899999999999999 88898643211 111111100 000
Q ss_pred hhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHH
Q 045127 433 VVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMIT 477 (508)
Q Consensus 433 ~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~ 477 (508)
.... ......+.+++.+||+.+|++|||+.|+++.|+
T Consensus 238 -----~~~~---~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 238 -----LPVP---EGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred -----CCCC---CCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 0000 112356788999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s |
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-34 Score=302.83 Aligned_cols=229 Identities=14% Similarity=0.191 Sum_probs=182.9
Q ss_pred HHHHHhhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCC-CCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCC
Q 045127 231 WMLKAATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGD-VSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRR 308 (508)
Q Consensus 231 ~~l~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 308 (508)
.+.....++|...+.||+|+||+||+|.. .+|+.||||++... ........+.+|+..+..++|+||+++.+.+...+
T Consensus 25 ~~~~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~ 104 (496)
T PTZ00283 25 ATAKEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKD 104 (496)
T ss_pred ccccccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceeccc
Confidence 34455668999999999999999999986 57899999998643 33445677899999999999999999988765322
Q ss_pred --------eeEEEEeecCCCCHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceE
Q 045127 309 --------TRAIVTEWTNGGNVELWLS-----ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPL 375 (508)
Q Consensus 309 --------~~~lv~e~~~~gsL~~~l~-----~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~k 375 (508)
..++||||+++|+|.+++. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+|
T Consensus 105 ~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~-~IiHrDLKP~NILl~~~~~vk 183 (496)
T PTZ00283 105 PRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSK-HMIHRDIKSANILLCSNGLVK 183 (496)
T ss_pred ccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC-CEecCCCCHHHEEEeCCCCEE
Confidence 3689999999999999886 34689999999999999999999999 999999999999999999999
Q ss_pred EeeccCCC-----------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhc
Q 045127 376 ISRFKIEY-----------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHY 426 (508)
Q Consensus 376 l~Dfg~~~-----------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~ 426 (508)
|+|||+++ .++.++|||||||++|||++|+.||.... ....+....
T Consensus 184 L~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~-----~~~~~~~~~ 258 (496)
T PTZ00283 184 LGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGEN-----MEEVMHKTL 258 (496)
T ss_pred EEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC-----HHHHHHHHh
Confidence 99999742 24568999999999999999999997432 111121111
Q ss_pred cchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 427 PENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 427 ~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
... .++ + . ......+.+++.+||+.||.+||++.++++.
T Consensus 259 ~~~----~~~-~--~---~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 259 AGR----YDP-L--P---PSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred cCC----CCC-C--C---CCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 110 000 0 0 1124567789999999999999999999864
|
|
| >cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-34 Score=278.68 Aligned_cols=223 Identities=20% Similarity=0.281 Sum_probs=179.6
Q ss_pred cCCCCCceeeecCCeEEEEEEEC------CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeE
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILR------DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRA 311 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 311 (508)
.+|...++||+|+||.||++... ++..+++|.+... .......+.+|+++++.++|+||+++++++...+..+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 83 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA-SESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLL 83 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcC-CHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceE
Confidence 45777899999999999999742 3568899988643 3445678999999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHhcc----------------CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceE
Q 045127 312 IVTEWTNGGNVELWLSE----------------SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPL 375 (508)
Q Consensus 312 lv~e~~~~gsL~~~l~~----------------~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~k 375 (508)
++|||+++++|.+++.. ..+++..+..++.|++.|++|||+. |++||||||+||++++++.+|
T Consensus 84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~-~i~H~dlkp~nil~~~~~~~k 162 (280)
T cd05092 84 MVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL-HFVHRDLATRNCLVGQGLVVK 162 (280)
T ss_pred EEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC-CeecccccHhhEEEcCCCCEE
Confidence 99999999999999862 2478999999999999999999999 999999999999999999999
Q ss_pred EeeccCCC-----------------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHh
Q 045127 376 ISRFKIEY-----------------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMH 425 (508)
Q Consensus 376 l~Dfg~~~-----------------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~ 425 (508)
|+|||++. .++.++|||||||++|||++ |+.||....... ........
T Consensus 163 L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~--~~~~~~~~ 240 (280)
T cd05092 163 IGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTE--AIECITQG 240 (280)
T ss_pred ECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHH--HHHHHHcC
Confidence 99998642 23567899999999999998 999986432211 11111100
Q ss_pred ccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHH
Q 045127 426 YPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMIT 477 (508)
Q Consensus 426 ~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~ 477 (508)
.. .... ......+.+++.+||+.||.+||+++||++.|+
T Consensus 241 ~~----------~~~~---~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 241 RE----------LERP---RTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred cc----------CCCC---CCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 00 0000 112345778999999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory |
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-34 Score=308.19 Aligned_cols=235 Identities=14% Similarity=0.176 Sum_probs=185.7
Q ss_pred cCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCC--HHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEE
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVS--REIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVT 314 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 314 (508)
++|+..++||+|+||.||+|... +++.||+|++..... ....+++.+|++++++++||||+++++++.+++..+++|
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 57899999999999999999974 589999999965432 334677999999999999999999999999999999999
Q ss_pred eecCCCCHHHHhcc------------CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC
Q 045127 315 EWTNGGNVELWLSE------------SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE 382 (508)
Q Consensus 315 e~~~~gsL~~~l~~------------~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~ 382 (508)
||++||+|.+++.. ...++..+.+++.||++||+|||++ ||+||||||+||+++.++.+||+|||++
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~-GIIHRDLKPeNILLd~dg~vKLiDFGLA 160 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK-GVLHRDLKPDNILLGLFGEVVILDWGAA 160 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC-CccccCCchheEEEcCCCCEEEEecCcc
Confidence 99999999998851 2346677899999999999999999 9999999999999999999999999865
Q ss_pred CC---------------------------------------------CCCcchhhHHHHHHHHHHhCCCCCcccccCccc
Q 045127 383 YQ---------------------------------------------HRSTKYVYKFGLFLLEMITNRRPLEEFERGEAG 417 (508)
Q Consensus 383 ~~---------------------------------------------~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~ 417 (508)
.. ++.++|||||||++|||+||+.||........
T Consensus 161 k~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki- 239 (932)
T PRK13184 161 IFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRKI- 239 (932)
T ss_pred eecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhh-
Confidence 31 24568999999999999999999975221111
Q ss_pred HHHHHHHhccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCC-CHHHHHHHHHHHHhhCCCC
Q 045127 418 FIEYIRMHYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLP-SLVQIYNMITRAYKSCPIL 486 (508)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-s~~evl~~L~~i~~~~~~~ 486 (508)
. ..... .++.- ..........+.+++.+|++.||++|| +++++.+.|+......+.+
T Consensus 240 -~--~~~~i-------~~P~~--~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq~~p~w 297 (932)
T PRK13184 240 -S--YRDVI-------LSPIE--VAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQGSPEW 297 (932)
T ss_pred -h--hhhhc-------cChhh--ccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhcCccc
Confidence 0 00000 00000 000012234577889999999999995 6788888888887765544
|
|
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-34 Score=275.43 Aligned_cols=221 Identities=19% Similarity=0.340 Sum_probs=180.2
Q ss_pred cCCCCCceeeecCCeEEEEEEECCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEeec
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWT 317 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 317 (508)
.+|+..+.||+|+||.||+|.+.++..+|+|.+..... ....+.+|++++++++|||++++++++......+++|||+
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 81 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAM--SEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFM 81 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCC--CHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcC
Confidence 46777899999999999999987788999999864332 2457889999999999999999999999888999999999
Q ss_pred CCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC------------
Q 045127 318 NGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------------ 383 (508)
Q Consensus 318 ~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------------ 383 (508)
++++|.+++. ...++++.+..++.|++.|++|||+. +++||||||+||+++.++.++|+|||.+.
T Consensus 82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~-~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~ 160 (256)
T cd05112 82 EHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESS-NVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTG 160 (256)
T ss_pred CCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC-CccccccccceEEEcCCCeEEECCCcceeecccCcccccCC
Confidence 9999999987 34689999999999999999999999 99999999999999999999999998532
Q ss_pred ----------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHH
Q 045127 384 ----------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFD 446 (508)
Q Consensus 384 ----------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 446 (508)
.++.++||||||+++|||++ |+.||...... .+........ ....+. .
T Consensus 161 ~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~--~~~~~~~~~~-----~~~~~~--------~ 225 (256)
T cd05112 161 TKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNS--EVVETINAGF-----RLYKPR--------L 225 (256)
T ss_pred CccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHH--HHHHHHhCCC-----CCCCCC--------C
Confidence 23457999999999999998 99998643211 1111111000 000111 1
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCHHHHHHHH
Q 045127 447 QAEQGLGLGLMCTDQPTGKLPSLVQIYNMI 476 (508)
Q Consensus 447 ~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L 476 (508)
....+.+++.+||+.+|++|||+.|+++.|
T Consensus 226 ~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 226 ASQSVYELMQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred CCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence 245688899999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-34 Score=284.96 Aligned_cols=230 Identities=19% Similarity=0.265 Sum_probs=184.8
Q ss_pred cCCCCCceeeecCCeEEEEEEECC--------CCEEEEEEecCCCCHHHHHHHHHHHHHHhhc-CCCCccceeeEEecCC
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILRD--------GTRVKIEIYKGDVSREIRDEFVEECKLLVQF-QHKNLIRVLGWNNSRR 308 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 308 (508)
.+|++.+.||+|+||.||+|.... +..||+|.++........+.+.+|+++++++ +||||+++++++....
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 91 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCC
Confidence 468889999999999999997521 2368999987655555677899999999999 7999999999999988
Q ss_pred eeEEEEeecCCCCHHHHhcc-----------------CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCC
Q 045127 309 TRAIVTEWTNGGNVELWLSE-----------------SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDN 371 (508)
Q Consensus 309 ~~~lv~e~~~~gsL~~~l~~-----------------~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~ 371 (508)
..+++|||+++|+|.+++.. ..+++.++..++.|++.||+|||++ |++||||||+||+++.+
T Consensus 92 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~-givH~dlkp~Nill~~~ 170 (334)
T cd05100 92 PLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ-KCIHRDLAARNVLVTED 170 (334)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC-CeeccccccceEEEcCC
Confidence 99999999999999999862 2478889999999999999999999 99999999999999999
Q ss_pred CceEEeeccCCC-----------------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHH
Q 045127 372 LEPLISRFKIEY-----------------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEY 421 (508)
Q Consensus 372 ~~~kl~Dfg~~~-----------------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~ 421 (508)
+.+||+|||.+. .++.++||||||+++|||++ |..||..... .+.
T Consensus 171 ~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~-----~~~ 245 (334)
T cd05100 171 NVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV-----EEL 245 (334)
T ss_pred CcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCH-----HHH
Confidence 999999998642 23457999999999999998 8888864321 111
Q ss_pred HHHhccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhC
Q 045127 422 IRMHYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSC 483 (508)
Q Consensus 422 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 483 (508)
........ ..... ......+.+++.+||+.+|++|||+.|+++.|+++....
T Consensus 246 ~~~~~~~~-------~~~~~---~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~~ 297 (334)
T cd05100 246 FKLLKEGH-------RMDKP---ANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTVT 297 (334)
T ss_pred HHHHHcCC-------CCCCC---CCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhhc
Confidence 11110000 00000 112456778999999999999999999999999997543
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-35 Score=294.42 Aligned_cols=224 Identities=11% Similarity=0.093 Sum_probs=180.0
Q ss_pred cCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCC--CHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEE
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDV--SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVT 314 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 314 (508)
++|+..+.||+|+||.||+|... +++.||+|+++... .......+.+|++++..++||||+++++++.++...++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 46888999999999999999974 68999999996432 1134567889999999999999999999999999999999
Q ss_pred eecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC----------
Q 045127 315 EWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY---------- 383 (508)
Q Consensus 315 e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~---------- 383 (508)
||+++++|.+++. ...+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||.+.
T Consensus 81 e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~-giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~ 159 (350)
T cd05573 81 EYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKL-GFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREY 159 (350)
T ss_pred cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHHeEECCCCCEEeecCCCCccCcccCcccc
Confidence 9999999999997 45889999999999999999999999 99999999999999999999999998642
Q ss_pred ----------------------------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCccc
Q 045127 384 ----------------------------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAG 417 (508)
Q Consensus 384 ----------------------------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~ 417 (508)
.++.++|||||||++|||++|+.||.......
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~-- 237 (350)
T cd05573 160 YLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQE-- 237 (350)
T ss_pred cccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHHH--
Confidence 23467999999999999999999997543111
Q ss_pred HHHHHHHhccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCC-HHHHHHH
Q 045127 418 FIEYIRMHYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPS-LVQIYNM 475 (508)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-~~evl~~ 475 (508)
........ ...+..... ......+.+++.+|+. ||.+||+ ++|+++.
T Consensus 238 ---~~~~i~~~------~~~~~~p~~-~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 238 ---TYNKIINW------KESLRFPPD-PPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred ---HHHHHhcc------CCcccCCCC-CCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 11111000 000100000 0124556778889997 9999999 9999975
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-34 Score=280.71 Aligned_cols=224 Identities=16% Similarity=0.203 Sum_probs=181.6
Q ss_pred hcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEe
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTE 315 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 315 (508)
.++|++.+.||+|++|.||+|.+ .++..+|+|.+... .....+.+.+|++++++++||||+++++++..+...++|||
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIE-SEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIE 82 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeC-CHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEee
Confidence 46788899999999999999997 46899999999644 33356788999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC----------
Q 045127 316 WTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY---------- 383 (508)
Q Consensus 316 ~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~---------- 383 (508)
|+++++|.+++. ...+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||.+.
T Consensus 83 ~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~-~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~ 161 (280)
T cd06611 83 FCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSH-KVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKRD 161 (280)
T ss_pred ccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCChhhEEECCCCCEEEccCccchhhcccccccc
Confidence 999999999987 45789999999999999999999999 99999999999999999999999998531
Q ss_pred ----------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCC
Q 045127 384 ----------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLT 441 (508)
Q Consensus 384 ----------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 441 (508)
.++.++||||||+++|||++|+.||....... ....... ...+.+...
T Consensus 162 ~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~-----~~~~~~~-----~~~~~~~~~ 231 (280)
T cd06611 162 TFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMR-----VLLKILK-----SEPPTLDQP 231 (280)
T ss_pred eeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHH-----HHHHHhc-----CCCCCcCCc
Confidence 13457999999999999999999997542211 1111000 000111000
Q ss_pred cchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 442 ENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 442 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
......+.+++.+||+.+|++||++.++++.
T Consensus 232 ---~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 232 ---SKWSSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred ---ccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 1123456788999999999999999999874
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-34 Score=273.44 Aligned_cols=218 Identities=24% Similarity=0.409 Sum_probs=179.8
Q ss_pred ceeeecCCeEEEEEEECCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEeecCCCCHH
Q 045127 244 NLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWTNGGNVE 323 (508)
Q Consensus 244 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~ 323 (508)
++||+|++|.||+|...+++.|++|.+...........+.+|++++++++||||+++++++......++||||+++++|.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~ 80 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL 80 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence 46899999999999986699999999876555556778999999999999999999999999999999999999999999
Q ss_pred HHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC------------------
Q 045127 324 LWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------------------ 383 (508)
Q Consensus 324 ~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------------------ 383 (508)
+++. ...+++..+..++.|++.||+|||++ +++||||||+||+++.++.+||+|||.+.
T Consensus 81 ~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~-~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~ 159 (251)
T cd05041 81 TFLRKKKNRLTVKKLLQMSLDAAAGMEYLESK-NCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIPI 159 (251)
T ss_pred HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC-CEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCccee
Confidence 9986 45678999999999999999999999 99999999999999999999999998632
Q ss_pred -----------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHHHHH
Q 045127 384 -----------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQAEQG 451 (508)
Q Consensus 384 -----------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l 451 (508)
.++.++||||||+++|||+| |..||....... ....+.... ..... ......+
T Consensus 160 ~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~--~~~~~~~~~----------~~~~~---~~~~~~~ 224 (251)
T cd05041 160 KWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQ--TRERIESGY----------RMPAP---QLCPEEI 224 (251)
T ss_pred ccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHH--HHHHHhcCC----------CCCCC---ccCCHHH
Confidence 23457899999999999999 888886433211 111111100 00000 1224568
Q ss_pred HHHHHhcCCCCCCCCCCHHHHHHHHH
Q 045127 452 LGLGLMCTDQPTGKLPSLVQIYNMIT 477 (508)
Q Consensus 452 ~~l~~~Cl~~dP~~RPs~~evl~~L~ 477 (508)
.+++.+|+..+|++|||+.|+++.|+
T Consensus 225 ~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 225 YRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred HHHHHHHhccChhhCcCHHHHHHHhh
Confidence 88999999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-34 Score=287.38 Aligned_cols=219 Identities=15% Similarity=0.176 Sum_probs=174.4
Q ss_pred CCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCC--CHHHHHHHHHHHHHHhhcCCC-CccceeeEEecCCeeEEEE
Q 045127 239 GFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDV--SREIRDEFVEECKLLVQFQHK-NLIRVLGWNNSRRTRAIVT 314 (508)
Q Consensus 239 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~-niv~~~~~~~~~~~~~lv~ 314 (508)
+|+..+.||+|+||.||+|... +++.||+|++.... .....+.+..|.+++..++|+ +|+++++++...+..|+||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 4788899999999999999974 57899999996432 223456788899999999764 5888999999889999999
Q ss_pred eecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC----------
Q 045127 315 EWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY---------- 383 (508)
Q Consensus 315 e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~---------- 383 (508)
||+++|+|.+++. ...+++..+..++.|++.||+|||++ ||+||||||+|||++.++.+||+|||++.
T Consensus 81 E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~ 159 (324)
T cd05587 81 EYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSK-GIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKTTR 159 (324)
T ss_pred cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCCHHHeEEcCCCCEEEeecCcceecCCCCCcee
Confidence 9999999999887 56789999999999999999999999 99999999999999999999999999642
Q ss_pred -----------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHH
Q 045127 384 -----------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFD 446 (508)
Q Consensus 384 -----------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 446 (508)
.++.++|||||||++|||+||+.||...... .....+. ........ .
T Consensus 160 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~--~~~~~i~-----------~~~~~~~~---~ 223 (324)
T cd05587 160 TFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDED--ELFQSIM-----------EHNVSYPK---S 223 (324)
T ss_pred eecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH--HHHHHHH-----------cCCCCCCC---C
Confidence 2456789999999999999999999743211 1111111 11110000 1
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCH-----HHHHH
Q 045127 447 QAEQGLGLGLMCTDQPTGKLPSL-----VQIYN 474 (508)
Q Consensus 447 ~~~~l~~l~~~Cl~~dP~~RPs~-----~evl~ 474 (508)
....+.+++.+|++.||.+|++. +++.+
T Consensus 224 ~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~ 256 (324)
T cd05587 224 LSKEAVSICKGLLTKHPAKRLGCGPTGERDIRE 256 (324)
T ss_pred CCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 23456788899999999999976 56654
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-34 Score=276.39 Aligned_cols=225 Identities=21% Similarity=0.331 Sum_probs=179.8
Q ss_pred CCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCHHH-HHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEeec
Q 045127 240 FSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSREI-RDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWT 317 (508)
Q Consensus 240 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 317 (508)
|+..+.||+|+||+||++... +++.+|+|++........ .....+|+.++++++||||+++++++......++||||+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 456789999999999999985 467899999976544422 234466999999999999999999999999999999999
Q ss_pred CCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-------------
Q 045127 318 NGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------------- 383 (508)
Q Consensus 318 ~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------------- 383 (508)
++++|.+++. ...+++..+..++.|+++||++||+. +++|+||||+||+++.++.++|+|||.+.
T Consensus 81 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~-~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~ 159 (260)
T PF00069_consen 81 PGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSK-GIVHRDIKPENILLDENGEVKLIDFGSSVKLSENNENFNPFV 159 (260)
T ss_dssp TTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHT-TEEESSBSGGGEEESTTSEEEESSGTTTEESTSTTSEBSSSS
T ss_pred ccccccccccccccccccccccccccccccccccccc-cccccccccccccccccccccccccccccccccccccccccc
Confidence 9999999998 78899999999999999999999999 99999999999999999999999998742
Q ss_pred ---------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHH
Q 045127 384 ---------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQA 448 (508)
Q Consensus 384 ---------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 448 (508)
..+.++||||+|+++|+|++|..||...... ............ ......... ....
T Consensus 160 ~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~--~~~~~~~~~~~~----~~~~~~~~~---~~~~ 230 (260)
T PF00069_consen 160 GTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSD--DQLEIIEKILKR----PLPSSSQQS---REKS 230 (260)
T ss_dssp SSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHH--HHHHHHHHHHHT----HHHHHTTSH---TTSH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccch--hhhhhhhhcccc----ccccccccc---chhH
Confidence 3456889999999999999999999854111 111111111100 011100000 0113
Q ss_pred HHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 449 EQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 449 ~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
..+.+++..||+.||++|||+.++++
T Consensus 231 ~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 231 EELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp HHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred HHHHHHHHHHccCChhHCcCHHHHhc
Confidence 67889999999999999999999975
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-35 Score=276.03 Aligned_cols=239 Identities=14% Similarity=0.139 Sum_probs=181.8
Q ss_pred HhhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCC-CHHHHHHHHHHHHHHhhcCCCCccceeeEEec-----C
Q 045127 235 AATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDV-SREIRDEFVEECKLLVQFQHKNLIRVLGWNNS-----R 307 (508)
Q Consensus 235 ~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-----~ 307 (508)
.....|...+.||+|+||.|+.|.. .+|+.||||++.... ..-..++..+|+++++.++|+||+.+.+++.. -
T Consensus 19 ~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f 98 (359)
T KOG0660|consen 19 EIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKF 98 (359)
T ss_pred eccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeeccccccccc
Confidence 3445666789999999999999997 578999999986333 33457788999999999999999999998865 2
Q ss_pred CeeEEEEeecCCCCHHHHhccCC-CCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC---
Q 045127 308 RTRAIVTEWTNGGNVELWLSESA-PSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY--- 383 (508)
Q Consensus 308 ~~~~lv~e~~~~gsL~~~l~~~~-l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~--- 383 (508)
...|+|+|+| +.+|...++.+. ++...+.-++.|+++||+|+|+. +|+|||+||+|++++.+...||+|||+++
T Consensus 99 ~DvYiV~elM-etDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSA-nViHRDLKPsNll~n~~c~lKI~DFGLAR~~~ 176 (359)
T KOG0660|consen 99 NDVYLVFELM-ETDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSA-NVIHRDLKPSNLLLNADCDLKICDFGLARYLD 176 (359)
T ss_pred ceeEEehhHH-hhHHHHHHHcCccccHHHHHHHHHHHHHhcchhhcc-cccccccchhheeeccCCCEEeccccceeecc
Confidence 4679999999 569999999555 99999999999999999999999 99999999999999999999999999864
Q ss_pred ---------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccC-cccHHHHHHHhcc--------
Q 045127 384 ---------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERG-EAGFIEYIRMHYP-------- 427 (508)
Q Consensus 384 ---------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~-~~~~~~~~~~~~~-------- 427 (508)
.|+.+.||||.|||+.||++|++-|.+...- ...+...+.....
T Consensus 177 ~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~ 256 (359)
T KOG0660|consen 177 KFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIR 256 (359)
T ss_pred ccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhc
Confidence 3456789999999999999999998753211 1111111100101
Q ss_pred -chhhhhhhhcccCCcc-----hHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 428 -ENLQLVVDERMMLTEN-----MFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 428 -~~~~~~~~~~l~~~~~-----~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
+.....+......... ........+++..+++..||.+|+|++|.++.
T Consensus 257 s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~h 310 (359)
T KOG0660|consen 257 SEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAH 310 (359)
T ss_pred cHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 1111111111100000 01124466788889999999999999999875
|
|
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-34 Score=288.88 Aligned_cols=215 Identities=18% Similarity=0.179 Sum_probs=173.7
Q ss_pred ceeeecCCeEEEEEEE-CCCCEEEEEEecCCC--CHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEeecCCC
Q 045127 244 NLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDV--SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWTNGG 320 (508)
Q Consensus 244 ~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 320 (508)
+.||+|+||.||++.. .+++.||+|++.... .......+..|+++++.++||||+++.+++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 4699999999999996 468999999996432 2234567788999999999999999999999999999999999999
Q ss_pred CHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhh-CCCccccCCCCCCEEecCCCceEEeeccCCC---------------
Q 045127 321 NVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQE-QWPEVDYDLRTGSVLLTDNLEPLISRFKIEY--------------- 383 (508)
Q Consensus 321 sL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~-~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~--------------- 383 (508)
+|..++. ...+++..+..++.||+.||+|||+ . ||+||||||+||+++.++.+||+|||++.
T Consensus 81 ~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~-~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt 159 (325)
T cd05594 81 ELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK-NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGT 159 (325)
T ss_pred cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcC-CEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCcccccccCC
Confidence 9999887 5678999999999999999999997 7 99999999999999999999999998632
Q ss_pred ------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHHHHH
Q 045127 384 ------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQAEQG 451 (508)
Q Consensus 384 ------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l 451 (508)
.++.++|||||||++|||++|+.||...... .. ..... ........ .....+
T Consensus 160 ~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~--~~---~~~i~--------~~~~~~p~---~~~~~~ 223 (325)
T cd05594 160 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--KL---FELIL--------MEEIRFPR---TLSPEA 223 (325)
T ss_pred cccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHH--HH---HHHHh--------cCCCCCCC---CCCHHH
Confidence 3457899999999999999999999643211 11 11110 00010000 113456
Q ss_pred HHHHHhcCCCCCCCCC-----CHHHHHHH
Q 045127 452 LGLGLMCTDQPTGKLP-----SLVQIYNM 475 (508)
Q Consensus 452 ~~l~~~Cl~~dP~~RP-----s~~evl~~ 475 (508)
.+++.+|++.||++|+ ++.++++.
T Consensus 224 ~~li~~~L~~dP~~R~~~~~~~~~~il~h 252 (325)
T cd05594 224 KSLLSGLLKKDPKQRLGGGPDDAKEIMQH 252 (325)
T ss_pred HHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence 7888999999999996 89999864
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-34 Score=286.99 Aligned_cols=214 Identities=14% Similarity=0.183 Sum_probs=171.3
Q ss_pred ceeeecCCeEEEEEEEC-CCCEEEEEEecCCC--CHHHHHHHHHHHHHHhhc-CCCCccceeeEEecCCeeEEEEeecCC
Q 045127 244 NLVGKNEGAAIYKGILR-DGTRVKIEIYKGDV--SREIRDEFVEECKLLVQF-QHKNLIRVLGWNNSRRTRAIVTEWTNG 319 (508)
Q Consensus 244 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~ 319 (508)
+.||+|+||.||+|+.. +++.||+|++.... .....+.+..|..++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999974 68899999986432 122456677888888876 699999999999999999999999999
Q ss_pred CCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC---------------
Q 045127 320 GNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY--------------- 383 (508)
Q Consensus 320 gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~--------------- 383 (508)
|+|.+++. ...+++..+..++.|++.||+|||++ +++||||||+||+++.++.+||+|||++.
T Consensus 81 g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~-~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt 159 (320)
T cd05590 81 GDLMFHIQKSRRFDEARARFYAAEITSALMFLHDK-GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTSTFCGT 159 (320)
T ss_pred chHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCcccccccC
Confidence 99999887 56789999999999999999999999 99999999999999999999999998632
Q ss_pred ------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHHHHH
Q 045127 384 ------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQAEQG 451 (508)
Q Consensus 384 ------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l 451 (508)
.++.++|||||||++|||++|+.||...... ........ ....... .....+
T Consensus 160 ~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~-----~~~~~i~~--------~~~~~~~---~~~~~~ 223 (320)
T cd05590 160 PDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENED-----DLFEAILN--------DEVVYPT---WLSQDA 223 (320)
T ss_pred ccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH-----HHHHHHhc--------CCCCCCC---CCCHHH
Confidence 2356789999999999999999999743211 11111111 1110000 123456
Q ss_pred HHHHHhcCCCCCCCCCCH------HHHHH
Q 045127 452 LGLGLMCTDQPTGKLPSL------VQIYN 474 (508)
Q Consensus 452 ~~l~~~Cl~~dP~~RPs~------~evl~ 474 (508)
.+++.+|++.||++||++ +++++
T Consensus 224 ~~li~~~L~~dP~~R~~~~~~~~~~~~~~ 252 (320)
T cd05590 224 VDILKAFMTKNPTMRLGSLTLGGEEAILR 252 (320)
T ss_pred HHHHHHHcccCHHHCCCCCCCCCHHHHHc
Confidence 788899999999999998 66654
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-34 Score=285.58 Aligned_cols=225 Identities=12% Similarity=0.136 Sum_probs=183.8
Q ss_pred HhhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCC--HHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeE
Q 045127 235 AATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVS--REIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRA 311 (508)
Q Consensus 235 ~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 311 (508)
...++|+....||+|+||.||.|+- .+|..+|+|++++... ....+....|-.+|...++|.||+++..|.+.+..|
T Consensus 138 ~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LY 217 (550)
T KOG0605|consen 138 LSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLY 217 (550)
T ss_pred CCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeE
Confidence 4668999999999999999999996 4699999999975432 234677889999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC--------
Q 045127 312 IVTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE-------- 382 (508)
Q Consensus 312 lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~-------- 382 (508)
+||||++||++..+|. ...+++..+.-++.+++-|+..+|+. |+|||||||+|+|||..|.+||+|||++
T Consensus 218 LiMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~-gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~ 296 (550)
T KOG0605|consen 218 LIMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQL-GYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHR 296 (550)
T ss_pred EEEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHc-CcccccCChhheeecCCCCEeeccccccchhhhhhh
Confidence 9999999999999988 78899999999999999999999999 9999999999999999999999999872
Q ss_pred ------------------------------------------------------------------CCCCCcchhhHHHH
Q 045127 383 ------------------------------------------------------------------YQHRSTKYVYKFGL 396 (508)
Q Consensus 383 ------------------------------------------------------------------~~~~~~~Dv~SlGv 396 (508)
..|+..+|.||+||
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~ 376 (550)
T KOG0605|consen 297 IESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLGC 376 (550)
T ss_pred hhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHHH
Confidence 12345689999999
Q ss_pred HHHHHHhCCCCCcccccCcc--cHHHHHHHhccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCC---CHHH
Q 045127 397 FLLEMITNRRPLEEFERGEA--GFIEYIRMHYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLP---SLVQ 471 (508)
Q Consensus 397 il~elltg~~P~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP---s~~e 471 (508)
|+|||+.|.+||......+. .+..|.. .+..+.. .....+..++|.+|+. ||++|- .++|
T Consensus 377 ImyEmLvGyPPF~s~tp~~T~rkI~nwr~-------------~l~fP~~-~~~s~eA~DLI~rll~-d~~~RLG~~G~~E 441 (550)
T KOG0605|consen 377 IMYEMLVGYPPFCSETPQETYRKIVNWRE-------------TLKFPEE-VDLSDEAKDLITRLLC-DPENRLGSKGAEE 441 (550)
T ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHHHhh-------------hccCCCc-CcccHHHHHHHHHHhc-CHHHhcCcccHHH
Confidence 99999999999985443221 1122211 1111111 1223667788888888 999996 5777
Q ss_pred HHHH
Q 045127 472 IYNM 475 (508)
Q Consensus 472 vl~~ 475 (508)
|.++
T Consensus 442 IK~H 445 (550)
T KOG0605|consen 442 IKKH 445 (550)
T ss_pred HhcC
Confidence 7654
|
|
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-34 Score=280.61 Aligned_cols=230 Identities=14% Similarity=0.211 Sum_probs=184.8
Q ss_pred cCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEee
Q 045127 238 NGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEW 316 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 316 (508)
++|+..+.||+|+||+||++.. .+++.||+|++.........+.+.+|+++++.++||||+++++++......++||||
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF 84 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence 4677889999999999999997 468999999987555455677899999999999999999999999999999999999
Q ss_pred cCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC------------
Q 045127 317 TNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------------ 383 (508)
Q Consensus 317 ~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------------ 383 (508)
+++++|.+++. .+.+++..+..++.|++.||.|||+..+++||||||+||+++.++.++|+|||++.
T Consensus 85 ~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~~~~~~~ 164 (284)
T cd06620 85 MDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSIADTFVG 164 (284)
T ss_pred CCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCCcccchhhhccCcccc
Confidence 99999999887 45789999999999999999999973389999999999999999999999998642
Q ss_pred -------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcc------cHHHHHHHhccchhhhhhhhcccCCcch
Q 045127 384 -------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEA------GFIEYIRMHYPENLQLVVDERMMLTENM 444 (508)
Q Consensus 384 -------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 444 (508)
..+.++|||||||++|++++|+.||........ .+..+... ......... ..
T Consensus 165 ~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~-~~ 235 (284)
T cd06620 165 TSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQ--------IVQEPPPRL-PS 235 (284)
T ss_pred CcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHH--------HhhccCCCC-Cc
Confidence 235689999999999999999999975432210 01111111 111110000 00
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHH
Q 045127 445 FDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMI 476 (508)
Q Consensus 445 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L 476 (508)
......+.+++.+|++.||++|||+.|++++.
T Consensus 236 ~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~ 267 (284)
T cd06620 236 SDFPEDLRDFVDACLLKDPTERPTPQQLCAMP 267 (284)
T ss_pred hhcCHHHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence 11345678899999999999999999999874
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-34 Score=282.17 Aligned_cols=240 Identities=14% Similarity=0.168 Sum_probs=182.2
Q ss_pred cCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEee
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEW 316 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 316 (508)
++|+..+.||+|+||.||+|... +++.||+|.++..........+.+|+.++++++||||+++++++..+...++||||
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~ 85 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 85 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence 57888999999999999999974 68899999986544333445678899999999999999999999999999999999
Q ss_pred cCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-----------
Q 045127 317 TNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY----------- 383 (508)
Q Consensus 317 ~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~----------- 383 (508)
++ ++|.+++. ...+++..+..++.|+++||+|||+. +++||||||+||+++.++.+||+|||.+.
T Consensus 86 ~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~-~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 163 (301)
T cd07873 86 LD-KDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRR-KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYSN 163 (301)
T ss_pred cc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCCcccc
Confidence 97 58988876 45688999999999999999999999 99999999999999999999999998642
Q ss_pred -----------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccc----hhhhhhhhc-----
Q 045127 384 -----------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPE----NLQLVVDER----- 437 (508)
Q Consensus 384 -----------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~----- 437 (508)
.++.++|||||||++|||++|+.||......+ ....+...... ......+..
T Consensus 164 ~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (301)
T cd07873 164 EVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEE--QLHFIFRILGTPTEETWPGILSNEEFKSY 241 (301)
T ss_pred cceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHHcCCCChhhchhhhcccccccc
Confidence 13457899999999999999999997543211 11111111110 011111100
Q ss_pred -ccCC-cc-----hHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH--HHHHHHh
Q 045127 438 -MMLT-EN-----MFDQAEQGLGLGLMCTDQPTGKLPSLVQIYN--MITRAYK 481 (508)
Q Consensus 438 -l~~~-~~-----~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~--~L~~i~~ 481 (508)
.... .. .......+.+++.+|++.||.+|||++|+++ .++.+.+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~~~ 294 (301)
T cd07873 242 NYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCLGE 294 (301)
T ss_pred ccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccccc
Confidence 0000 00 0011345678999999999999999999987 3444433
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-34 Score=282.30 Aligned_cols=224 Identities=13% Similarity=0.184 Sum_probs=182.4
Q ss_pred hcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEe
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTE 315 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 315 (508)
.++|+..+.||+|++|.||+|.. .+++.||+|.+...... ..+.+.+|+.+++.++||||+++++++..+...++|||
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e 96 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQP-KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME 96 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccc-hHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeec
Confidence 36799999999999999999996 57899999999644333 45678899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC------------
Q 045127 316 WTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------------ 383 (508)
Q Consensus 316 ~~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------------ 383 (508)
|+++++|.+++....+++.++..++.|++.||.|||+. |++||||||+||+++.++.++|+|||.+.
T Consensus 97 ~~~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~-~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~ 175 (297)
T cd06656 97 YLAGGSLTDVVTETCMDEGQIAAVCRECLQALDFLHSN-QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTM 175 (297)
T ss_pred ccCCCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEECCCCCEEECcCccceEccCCccCcCcc
Confidence 99999999999888899999999999999999999999 99999999999999999999999998632
Q ss_pred ---------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHH
Q 045127 384 ---------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQA 448 (508)
Q Consensus 384 ---------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 448 (508)
.++.++|||||||++|++++|+.||........... ... .. .+.+... ....
T Consensus 176 ~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~--~~~---~~-----~~~~~~~---~~~~ 242 (297)
T cd06656 176 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL--IAT---NG-----TPELQNP---ERLS 242 (297)
T ss_pred cCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheee--ecc---CC-----CCCCCCc---cccC
Confidence 234678999999999999999999964322111000 000 00 0000000 1123
Q ss_pred HHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 449 EQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 449 ~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
..+.+++.+||+.+|++||++.++++.
T Consensus 243 ~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (297)
T cd06656 243 AVFRDFLNRCLEMDVDRRGSAKELLQH 269 (297)
T ss_pred HHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 446778899999999999999999983
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-34 Score=286.12 Aligned_cols=220 Identities=13% Similarity=0.178 Sum_probs=174.2
Q ss_pred ceeeecCCeEEEEEEE-CCCCEEEEEEecCCCC--HHHHHHHHHHHHHHhhc-CCCCccceeeEEecCCeeEEEEeecCC
Q 045127 244 NLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVS--REIRDEFVEECKLLVQF-QHKNLIRVLGWNNSRRTRAIVTEWTNG 319 (508)
Q Consensus 244 ~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~ 319 (508)
+.||+|+||.||+|.. .+++.||+|+++.... ......+..|..++.++ +||||+++++++.+....++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 4699999999999997 4689999999975322 23456688999999998 699999999999999999999999999
Q ss_pred CCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC---------------
Q 045127 320 GNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY--------------- 383 (508)
Q Consensus 320 gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~--------------- 383 (508)
|+|.+++. ...+++..+..++.|++.||+|||++ |++||||||+||+++.++.+||+|||++.
T Consensus 81 g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~-~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt 159 (329)
T cd05588 81 GDLMFHMQRQRKLPEEHARFYSAEISLALNFLHER-GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTSTFCGT 159 (329)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCCHHHeEECCCCCEEECcCccccccccCCCccccccCC
Confidence 99998886 66899999999999999999999999 99999999999999999999999998642
Q ss_pred ------------CCCCcchhhHHHHHHHHHHhCCCCCcccccC---cccHHHHHHHhccchhhhhhhhcccCCcchHHHH
Q 045127 384 ------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERG---EAGFIEYIRMHYPENLQLVVDERMMLTENMFDQA 448 (508)
Q Consensus 384 ------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 448 (508)
.++.++|||||||++|||++|+.||+..... ......+..... ......... ...
T Consensus 160 ~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~p~---~~~ 229 (329)
T cd05588 160 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVI-------LEKQIRIPR---SLS 229 (329)
T ss_pred ccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHH-------HcCCCCCCC---CCC
Confidence 2356899999999999999999999743211 111111211111 111111111 123
Q ss_pred HHHHHHHHhcCCCCCCCCCC------HHHHHH
Q 045127 449 EQGLGLGLMCTDQPTGKLPS------LVQIYN 474 (508)
Q Consensus 449 ~~l~~l~~~Cl~~dP~~RPs------~~evl~ 474 (508)
..+.+++.+|++.||.+||+ ++++++
T Consensus 230 ~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~ 261 (329)
T cd05588 230 VKASSVLKGFLNKDPKERLGCHPQTGFRDIKS 261 (329)
T ss_pred HHHHHHHHHHhccCHHHcCCCCCCCCHHHHhc
Confidence 45778899999999999997 677764
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-34 Score=277.68 Aligned_cols=223 Identities=15% Similarity=0.228 Sum_probs=183.1
Q ss_pred cCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEee
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEW 316 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 316 (508)
++|+..+.||.|++|.||+|... +++.||+|.+...........+.+|+++++.++|+||+++++++.++...++|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEY 80 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEe
Confidence 36788899999999999999974 68999999997554444567789999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC--------------
Q 045127 317 TNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE-------------- 382 (508)
Q Consensus 317 ~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~-------------- 382 (508)
+++++|.+++....+++..+..++.|++.|+.|||+. +++||||+|+||++++++.++++|||.+
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~-~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~ 159 (274)
T cd06609 81 CGGGSCLDLLKPGKLDETYIAFILREVLLGLEYLHEE-GKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRNTFV 159 (274)
T ss_pred eCCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHEEECCCCCEEEcccccceeeccccccccccc
Confidence 9999999999877899999999999999999999999 9999999999999999999999999763
Q ss_pred -------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHHH
Q 045127 383 -------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQAE 449 (508)
Q Consensus 383 -------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 449 (508)
..++.++||||||+++|||+||+.||....... ....+... ..+.+... ....
T Consensus 160 ~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~--~~~~~~~~--------~~~~~~~~----~~~~ 225 (274)
T cd06609 160 GTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMR--VLFLIPKN--------NPPSLEGN----KFSK 225 (274)
T ss_pred CCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHH--HHHHhhhc--------CCCCCccc----ccCH
Confidence 124568999999999999999999997433111 11111111 11111100 0234
Q ss_pred HHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 450 QGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 450 ~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
.+.+++.+||..+|++|||++++++.
T Consensus 226 ~~~~~l~~~l~~~p~~Rpt~~~il~~ 251 (274)
T cd06609 226 PFKDFVSLCLNKDPKERPSAKELLKH 251 (274)
T ss_pred HHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 57788999999999999999999863
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-34 Score=273.61 Aligned_cols=239 Identities=13% Similarity=0.206 Sum_probs=182.8
Q ss_pred hcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCC-HHHHHHHHHHHHHHhhcCCCC-ccceeeEEecCC-----
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVS-REIRDEFVEECKLLVQFQHKN-LIRVLGWNNSRR----- 308 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~n-iv~~~~~~~~~~----- 308 (508)
...|+..++||+|+||+||+|+. .+|+.||+|+++-... +.......+|+.++++++|+| |+++++++.+.+
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~ 89 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGI 89 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccccc
Confidence 34566678899999999999996 5789999999975433 223455689999999999999 999999998876
Q ss_pred -eeEEEEeecCCCCHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC
Q 045127 309 -TRAIVTEWTNGGNVELWLSE-----SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE 382 (508)
Q Consensus 309 -~~~lv~e~~~~gsL~~~l~~-----~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~ 382 (508)
..++|+||++. +|..++.. ..++...+..++.|+++||+|||++ +|+||||||.||+|+++|.+||+|||++
T Consensus 90 ~~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~-~IlHRDLKPQNlLi~~~G~lKlaDFGlA 167 (323)
T KOG0594|consen 90 GKLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSH-GILHRDLKPQNLLISSSGVLKLADFGLA 167 (323)
T ss_pred ceEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhC-CeecccCCcceEEECCCCcEeeeccchH
Confidence 78999999965 99999982 4688889999999999999999999 9999999999999999999999999874
Q ss_pred ----------------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHH-------hcc
Q 045127 383 ----------------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRM-------HYP 427 (508)
Q Consensus 383 ----------------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~-------~~~ 427 (508)
..|+...||||+|||+.||++++.-|.+..+.+ .+....+. .++
T Consensus 168 ra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~-ql~~If~~lGtP~e~~Wp 246 (323)
T KOG0594|consen 168 RAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEID-QLFRIFRLLGTPNEKDWP 246 (323)
T ss_pred HHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHH-HHHHHHHHcCCCCccCCC
Confidence 356778999999999999999999988655422 12211111 111
Q ss_pred chhhhhhhh--cccCCc---chHH-H---HHHHHHHHHhcCCCCCCCCCCHHHHHHH--HHHH
Q 045127 428 ENLQLVVDE--RMMLTE---NMFD-Q---AEQGLGLGLMCTDQPTGKLPSLVQIYNM--ITRA 479 (508)
Q Consensus 428 ~~~~~~~~~--~l~~~~---~~~~-~---~~~l~~l~~~Cl~~dP~~RPs~~evl~~--L~~i 479 (508)
. .....+- .+.... .-.. . .....+++.+|++.+|.+|.|++.++.+ +..+
T Consensus 247 ~-v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~ 308 (323)
T KOG0594|consen 247 G-VSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSEL 308 (323)
T ss_pred C-ccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhccc
Confidence 1 1111111 110000 0000 0 1367788999999999999999999886 5444
|
|
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-34 Score=285.71 Aligned_cols=221 Identities=14% Similarity=0.197 Sum_probs=173.3
Q ss_pred ceeeecCCeEEEEEEE-CCCCEEEEEEecCCC--CHHHHHHHHHHHHHHhhc-CCCCccceeeEEecCCeeEEEEeecCC
Q 045127 244 NLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDV--SREIRDEFVEECKLLVQF-QHKNLIRVLGWNNSRRTRAIVTEWTNG 319 (508)
Q Consensus 244 ~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~ 319 (508)
+.||+|+||.||+|.. .+++.||+|+++... .......+..|..++.++ +||||+++++++..+...++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 4699999999999997 468899999997532 223456678899988877 799999999999999999999999999
Q ss_pred CCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC---------------
Q 045127 320 GNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY--------------- 383 (508)
Q Consensus 320 gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~--------------- 383 (508)
|+|..++. ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++.
T Consensus 81 ~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~-~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt 159 (329)
T cd05618 81 GDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER-GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGT 159 (329)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCccccccCC
Confidence 99998886 56799999999999999999999999 99999999999999999999999998642
Q ss_pred ------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCc---ccHHHHHHHhccchhhhhhhhcccCCcchHHHH
Q 045127 384 ------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGE---AGFIEYIRMHYPENLQLVVDERMMLTENMFDQA 448 (508)
Q Consensus 384 ------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 448 (508)
.++.++|||||||++|||++|+.||....... .....+..... .......+ ....
T Consensus 160 ~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i-------~~~~~~~p---~~~~ 229 (329)
T cd05618 160 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVI-------LEKQIRIP---RSLS 229 (329)
T ss_pred ccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHH-------hcCCCCCC---CCCC
Confidence 23568999999999999999999996432111 11111221111 11111111 1123
Q ss_pred HHHHHHHHhcCCCCCCCCCC------HHHHHHH
Q 045127 449 EQGLGLGLMCTDQPTGKLPS------LVQIYNM 475 (508)
Q Consensus 449 ~~l~~l~~~Cl~~dP~~RPs------~~evl~~ 475 (508)
..+.+++.+||+.||++||+ +.++++.
T Consensus 230 ~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05618 230 VKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 262 (329)
T ss_pred HHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcC
Confidence 45678899999999999998 4676554
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-34 Score=289.98 Aligned_cols=233 Identities=15% Similarity=0.149 Sum_probs=178.0
Q ss_pred CCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCC-CHHHHHHHHHHHHHHhhcCCCCccceeeEEecCC-----eeE
Q 045127 239 GFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDV-SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRR-----TRA 311 (508)
Q Consensus 239 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-----~~~ 311 (508)
+|+..+.||+|+||.||+|.. .+++.||+|.+.... .....+++.+|+++++.++||||+++++++.... ..+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 478889999999999999997 478999999986432 2234567889999999999999999999998766 789
Q ss_pred EEEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-------
Q 045127 312 IVTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------- 383 (508)
Q Consensus 312 lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------- 383 (508)
+||||+. ++|.+.+. ...+++..+..++.|++.||+|||+. |++||||||+||+++.++.+||+|||++.
T Consensus 81 lv~e~~~-~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~-~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~ 158 (372)
T cd07853 81 VVTELMQ-SDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSA-GILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDES 158 (372)
T ss_pred EEeeccc-cCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCChHHEEECCCCCEEeccccceeecccCcc
Confidence 9999996 57877775 66789999999999999999999999 99999999999999999999999998631
Q ss_pred ----------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccc-----------hh
Q 045127 384 ----------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPE-----------NL 430 (508)
Q Consensus 384 ----------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~-----------~~ 430 (508)
.++.++|||||||++|||++|+.||....... ....+...... ..
T Consensus 159 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~--~~~~i~~~~g~~~~~~~~~~~~~~ 236 (372)
T cd07853 159 KHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQ--QLDLITDLLGTPSLEAMRSACEGA 236 (372)
T ss_pred ccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHH--HHHHHHHHcCCCCHHHHHHhhHHH
Confidence 24567899999999999999999997543211 11111110000 00
Q ss_pred hhhhhhcccCCcc-------hHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 431 QLVVDERMMLTEN-------MFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 431 ~~~~~~~l~~~~~-------~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
...+......... .......+.+++.+|++.||++|||+.|+++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 288 (372)
T cd07853 237 RAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH 288 (372)
T ss_pred HHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence 0000000000000 00124567789999999999999999999875
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-34 Score=274.91 Aligned_cols=228 Identities=15% Similarity=0.264 Sum_probs=185.2
Q ss_pred cCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEee
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEW 316 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 316 (508)
++|+..+.||+|++|.||++... +++.|++|.+..........++.+|++++++++||||+++++++......++++||
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEY 80 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEe
Confidence 35777899999999999999985 68999999997665555677899999999999999999999999999999999999
Q ss_pred cCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhh-CCCccccCCCCCCEEecCCCceEEeeccCC-----------
Q 045127 317 TNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQE-QWPEVDYDLRTGSVLLTDNLEPLISRFKIE----------- 382 (508)
Q Consensus 317 ~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~-~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~----------- 382 (508)
+++++|.+++. ...+++..+..++.|++.|++|||+ . +++|+||||+||+++.++.++|+|||.+
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~-~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~ 159 (265)
T cd06605 81 MDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKH-KIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKTF 159 (265)
T ss_pred cCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCC-CeecCCCCHHHEEECCCCCEEEeecccchhhHHHHhhcc
Confidence 99999999997 3678999999999999999999999 8 9999999999999999999999999863
Q ss_pred --------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHH
Q 045127 383 --------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQA 448 (508)
Q Consensus 383 --------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 448 (508)
..++.++||||||+++|+|++|+.||..................... .+.+. . ....
T Consensus 160 ~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-----~~~~~---~-~~~~ 230 (265)
T cd06605 160 VGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEP-----PPRLP---S-GKFS 230 (265)
T ss_pred cCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCC-----CCCCC---h-hhcC
Confidence 23456799999999999999999999754322222222221111100 00010 0 0134
Q ss_pred HHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 449 EQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 449 ~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
..+.+++.+||..||++|||+.+++..
T Consensus 231 ~~~~~li~~~l~~~p~~Rpt~~~ll~~ 257 (265)
T cd06605 231 PDFQDFVNLCLIKDPRERPSYKELLEH 257 (265)
T ss_pred HHHHHHHHHHcCCCchhCcCHHHHhhC
Confidence 567889999999999999999999864
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-34 Score=273.90 Aligned_cols=220 Identities=17% Similarity=0.265 Sum_probs=180.1
Q ss_pred cCCCCCceeeecCCeEEEEEEECC-CCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEee
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILRD-GTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEW 316 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 316 (508)
++|+..+.||+|++|.||+|...+ +..+++|.+.... ..+.+.+|++++++++||||+++++++..+...++++||
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~---~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~ 79 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEE---DLQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEY 79 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHH---HHHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEec
Confidence 578899999999999999999854 7899999985432 267899999999999999999999999999999999999
Q ss_pred cCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-----------
Q 045127 317 TNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY----------- 383 (508)
Q Consensus 317 ~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~----------- 383 (508)
+++++|.+++. ...+++..+..++.|++.||.|||+. +++||||+|+||+++.++.++|+|||.+.
T Consensus 80 ~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~-~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~ 158 (256)
T cd06612 80 CGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSN-KKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNT 158 (256)
T ss_pred CCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCcceEEECCCCcEEEcccccchhcccCcccccc
Confidence 99999999986 56789999999999999999999999 99999999999999999999999998632
Q ss_pred ----------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHH
Q 045127 384 ----------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQ 447 (508)
Q Consensus 384 ----------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 447 (508)
.++.++||||||+++|+|++|+.||.......... .... ...+.+. .....
T Consensus 159 ~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~--~~~~--------~~~~~~~---~~~~~ 225 (256)
T cd06612 159 VIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIF--MIPN--------KPPPTLS---DPEKW 225 (256)
T ss_pred ccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhh--hhcc--------CCCCCCC---chhhc
Confidence 23457999999999999999999997532211000 0000 0000010 01112
Q ss_pred HHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 448 AEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 448 ~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
...+.+++.+||+.||++|||+.|+++
T Consensus 226 ~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 226 SPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred CHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 346788999999999999999999986
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-34 Score=285.16 Aligned_cols=215 Identities=16% Similarity=0.183 Sum_probs=173.4
Q ss_pred ceeeecCCeEEEEEEEC-CCCEEEEEEecCCC--CHHHHHHHHHHHHHHhhc-CCCCccceeeEEecCCeeEEEEeecCC
Q 045127 244 NLVGKNEGAAIYKGILR-DGTRVKIEIYKGDV--SREIRDEFVEECKLLVQF-QHKNLIRVLGWNNSRRTRAIVTEWTNG 319 (508)
Q Consensus 244 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~ 319 (508)
+.||+|+||.||+|... +++.||+|+++... .......+..|..++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999974 57899999996432 223456678899999888 699999999999999999999999999
Q ss_pred CCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC----------------
Q 045127 320 GNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE---------------- 382 (508)
Q Consensus 320 gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~---------------- 382 (508)
|+|..++. ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++
T Consensus 81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~-~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~ 159 (318)
T cd05570 81 GDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHER-GIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTSTFCGT 159 (318)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC-CeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCcccceecC
Confidence 99999887 55799999999999999999999999 9999999999999999999999999863
Q ss_pred -----------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHHHHH
Q 045127 383 -----------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQAEQG 451 (508)
Q Consensus 383 -----------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l 451 (508)
..++.++|||||||++|||++|+.||...... ....... ....... ......+
T Consensus 160 ~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~-----~~~~~i~--------~~~~~~~---~~~~~~~ 223 (318)
T cd05570 160 PDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDED-----ELFQSIL--------EDEVRYP---RWLSKEA 223 (318)
T ss_pred ccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHH-----HHHHHHH--------cCCCCCC---CcCCHHH
Confidence 23456899999999999999999999743211 1111111 1111000 1123457
Q ss_pred HHHHHhcCCCCCCCCCCH-----HHHHHH
Q 045127 452 LGLGLMCTDQPTGKLPSL-----VQIYNM 475 (508)
Q Consensus 452 ~~l~~~Cl~~dP~~RPs~-----~evl~~ 475 (508)
.+++.+||+.||++|||+ .++++.
T Consensus 224 ~~li~~~l~~dP~~R~s~~~~~~~~ll~~ 252 (318)
T cd05570 224 KSILKSFLTKNPEKRLGCLPTGEQDIKGH 252 (318)
T ss_pred HHHHHHHccCCHHHcCCCCCCCHHHHhcC
Confidence 789999999999999999 888753
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-34 Score=279.11 Aligned_cols=217 Identities=12% Similarity=0.104 Sum_probs=171.6
Q ss_pred eeecCCeEEEEEEE-CCCCEEEEEEecCCCCH--HHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEeecCCCCH
Q 045127 246 VGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSR--EIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWTNGGNV 322 (508)
Q Consensus 246 lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 322 (508)
||+|+||+||++.. .+++.||+|.+...... ...+.+..|++++++++||||+++.+++..+...++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 69999999999997 46899999998643221 2345678899999999999999999999999999999999999999
Q ss_pred HHHhc-----cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC--------------
Q 045127 323 ELWLS-----ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY-------------- 383 (508)
Q Consensus 323 ~~~l~-----~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~-------------- 383 (508)
.+++. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||.+.
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~g 159 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR-RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGYAG 159 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEECCCCCEEEeeCccceecCCCCccccccCC
Confidence 98774 35689999999999999999999999 99999999999999999999999998742
Q ss_pred -------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHHHH
Q 045127 384 -------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQAEQ 450 (508)
Q Consensus 384 -------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 450 (508)
.++.++|||||||++|||++|+.||........ ........ ........ ......
T Consensus 160 ~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~-~~~~~~~~--------~~~~~~~~---~~~~~~ 227 (280)
T cd05608 160 TPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE-NKELKQRI--------LNDSVTYP---DKFSPA 227 (280)
T ss_pred CcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchh-HHHHHHhh--------cccCCCCc---ccCCHH
Confidence 234679999999999999999999974322110 01111111 11111000 112456
Q ss_pred HHHHHHhcCCCCCCCCC-----CHHHHHHH
Q 045127 451 GLGLGLMCTDQPTGKLP-----SLVQIYNM 475 (508)
Q Consensus 451 l~~l~~~Cl~~dP~~RP-----s~~evl~~ 475 (508)
+.+++.+||+.||++|| +++++++.
T Consensus 228 ~~~li~~~l~~~P~~R~~~~~~~~~~~l~h 257 (280)
T cd05608 228 SKSFCEALLAKDPEKRLGFRDGNCDGLRTH 257 (280)
T ss_pred HHHHHHHHhcCCHHHhcCCCCCCHHHHhcC
Confidence 77888999999999999 77888764
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-34 Score=274.82 Aligned_cols=223 Identities=17% Similarity=0.315 Sum_probs=181.5
Q ss_pred hcCCCCCceeeecCCeEEEEEEECCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEee
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEW 316 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 316 (508)
.++|+..+.||+|+||.||+|...++..+++|.+... ......+.+|++++++++|+||+++++++.. ...+++|||
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~ 81 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG--SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEF 81 (260)
T ss_pred ccceeEEeEecCccceEEEEEEecCCccEEEEecCCC--hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEe
Confidence 3678899999999999999999877888999988643 2245678999999999999999999999887 678999999
Q ss_pred cCCCCHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC----------
Q 045127 317 TNGGNVELWLS---ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY---------- 383 (508)
Q Consensus 317 ~~~gsL~~~l~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~---------- 383 (508)
+++++|.+++. ...+++..+..++.|++.||+|||+. |++|+||||+||+++.++.+|++|||.+.
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~-~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~ 160 (260)
T cd05073 82 MAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR-NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAR 160 (260)
T ss_pred CCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhC-CccccccCcceEEEcCCCcEEECCCcceeeccCCCcccc
Confidence 99999999987 34578899999999999999999999 99999999999999999999999997531
Q ss_pred ------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcch
Q 045127 384 ------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENM 444 (508)
Q Consensus 384 ------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 444 (508)
.++.++|||||||++|++++ |+.||...... .+......... ....
T Consensus 161 ~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~--~~~~~~~~~~~----------~~~~--- 225 (260)
T cd05073 161 EGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP--EVIRALERGYR----------MPRP--- 225 (260)
T ss_pred cCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHH--HHHHHHhCCCC----------CCCc---
Confidence 23457899999999999999 99998743211 12222111110 0000
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHH
Q 045127 445 FDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITR 478 (508)
Q Consensus 445 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 478 (508)
......+.+++.+|++.+|++||++.++.+.|+.
T Consensus 226 ~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 226 ENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred ccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 1224567889999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-33 Score=275.77 Aligned_cols=230 Identities=17% Similarity=0.249 Sum_probs=181.5
Q ss_pred cCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecC--CeeEEEE
Q 045127 238 NGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSR--RTRAIVT 314 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~lv~ 314 (508)
++|+..+.||.|++|.||+|.. .+++.+|+|.+..........++.+|++++++++||||+++++++... ...++||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 80 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM 80 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence 4678889999999999999997 468899999997555445567899999999999999999999988653 4679999
Q ss_pred eecCCCCHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC------
Q 045127 315 EWTNGGNVELWLS-----ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------ 383 (508)
Q Consensus 315 e~~~~gsL~~~l~-----~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------ 383 (508)
||+++++|.+++. ...+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||++.
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~-~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~ 159 (287)
T cd06621 81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSR-KIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSL 159 (287)
T ss_pred EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEEecCCeEEEeeccccccccccc
Confidence 9999999998765 35688999999999999999999999 99999999999999999999999998632
Q ss_pred -------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccC---cccHHHHHHHhccchhhhhhhhcccCC
Q 045127 384 -------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERG---EAGFIEYIRMHYPENLQLVVDERMMLT 441 (508)
Q Consensus 384 -------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~ 441 (508)
.++.++||||||+++|+|++|+.||+..... ......+........+ ... .
T Consensus 160 ~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~---~ 232 (287)
T cd06621 160 AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPEL----KDE---P 232 (287)
T ss_pred cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhh----ccC---C
Confidence 3456799999999999999999999754321 1112222111100000 000 0
Q ss_pred cchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 442 ENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 442 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
.........+.+++.+||+.+|++|||+.|+++.
T Consensus 233 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~ 266 (287)
T cd06621 233 GNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEH 266 (287)
T ss_pred CCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhC
Confidence 0001224567899999999999999999999874
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-34 Score=290.23 Aligned_cols=224 Identities=16% Similarity=0.079 Sum_probs=178.7
Q ss_pred cCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCC--HHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEE
Q 045127 238 NGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVS--REIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVT 314 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 314 (508)
++|+..+.||+|+||.||+|.. .+++.||+|+++.... ....+.+.+|+.+++.++||||+++++++.+....++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 4688899999999999999997 4689999999974322 234567889999999999999999999999999999999
Q ss_pred eecCCCCHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC---------
Q 045127 315 EWTNGGNVELWLSE--SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY--------- 383 (508)
Q Consensus 315 e~~~~gsL~~~l~~--~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~--------- 383 (508)
||+++|+|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+.
T Consensus 81 e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~-~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~ 159 (330)
T cd05601 81 EYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQM-GYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMVN 159 (330)
T ss_pred CCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEcccCchHheEECCCCCEEeccCCCCeECCCCCcee
Confidence 99999999999973 6789999999999999999999999 99999999999999999999999998642
Q ss_pred -------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcc
Q 045127 384 -------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERM 438 (508)
Q Consensus 384 -------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 438 (508)
.++.++|||||||++|||++|+.||...... ......... ...+
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~-----~~~~~i~~~------~~~~ 228 (330)
T cd05601 160 SKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSA-----KTYNNIMNF------QRFL 228 (330)
T ss_pred eecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHH-----HHHHHHHcC------CCcc
Confidence 1246789999999999999999999743211 111111100 0000
Q ss_pred cCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 439 MLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 439 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
..+........+.+++..|+. +|++|||++++++.
T Consensus 229 -~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h 263 (330)
T cd05601 229 -KFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCH 263 (330)
T ss_pred -CCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCC
Confidence 000001123456678888997 99999999999863
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-34 Score=277.90 Aligned_cols=223 Identities=17% Similarity=0.232 Sum_probs=177.7
Q ss_pred HhhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhc-CCCCccceeeEEecC-----
Q 045127 235 AATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQF-QHKNLIRVLGWNNSR----- 307 (508)
Q Consensus 235 ~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~----- 307 (508)
.+++.|+..+.||+|+||.||+|.. .+++.||+|.+..... ....+..|+.+++++ +||||+++++++...
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~--~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 80 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD--EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGM 80 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCc--cHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCC
Confidence 4677899999999999999999997 4688999999864332 346788999999998 699999999998752
Q ss_pred -CeeEEEEeecCCCCHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC
Q 045127 308 -RTRAIVTEWTNGGNVELWLS---ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY 383 (508)
Q Consensus 308 -~~~~lv~e~~~~gsL~~~l~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~ 383 (508)
...+++|||+++++|.+++. ...+++..+..++.|++.|++|||++ +++|+||||+||++++++.++|+|||++.
T Consensus 81 ~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~-~ivh~dl~~~nili~~~~~~~l~Dfg~~~ 159 (272)
T cd06637 81 DDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH-KVIHRDIKGQNVLLTENAEVKLVDFGVSA 159 (272)
T ss_pred CcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC-CCccCCCCHHHEEECCCCCEEEccCCCce
Confidence 45799999999999999987 34689999999999999999999999 99999999999999999999999998742
Q ss_pred --------------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhh
Q 045127 384 --------------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQ 431 (508)
Q Consensus 384 --------------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~ 431 (508)
.++.++|||||||++|||++|+.||....... ..... ...
T Consensus 160 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~----~~~~~-~~~--- 231 (272)
T cd06637 160 QLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMR----ALFLI-PRN--- 231 (272)
T ss_pred ecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHH----HHHHH-hcC---
Confidence 13447999999999999999999996432111 11100 000
Q ss_pred hhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 432 LVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 432 ~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
..+.... ......+.+++.+||..||.+|||+.|+++
T Consensus 232 --~~~~~~~----~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 232 --PAPRLKS----KKWSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred --CCCCCCC----CCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 0011100 112345778999999999999999999975
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-34 Score=279.27 Aligned_cols=224 Identities=17% Similarity=0.210 Sum_probs=180.4
Q ss_pred hcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEe
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTE 315 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 315 (508)
.+.|+..+.||+|+||.||+|... ++..+++|.+... .....+.+.+|+.+++.++||||+++++.+..+...++|||
T Consensus 11 ~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 89 (292)
T cd06644 11 NEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETK-SEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIE 89 (292)
T ss_pred chhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccC-CHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEe
Confidence 356888999999999999999974 5899999998644 34456788999999999999999999999998899999999
Q ss_pred ecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC----------
Q 045127 316 WTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY---------- 383 (508)
Q Consensus 316 ~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~---------- 383 (508)
|+++++|..++. ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+|||.+.
T Consensus 90 ~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~-~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~ 168 (292)
T cd06644 90 FCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSM-KIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQRRD 168 (292)
T ss_pred cCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcC-CeeecCCCcceEEEcCCCCEEEccCccceeccccccccc
Confidence 999999988875 45789999999999999999999999 99999999999999999999999998631
Q ss_pred ----------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCC
Q 045127 384 ----------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLT 441 (508)
Q Consensus 384 ----------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 441 (508)
.++.++|||||||++|||++|+.||....... ........ ..+.....
T Consensus 169 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~-----~~~~~~~~-----~~~~~~~~ 238 (292)
T cd06644 169 SFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR-----VLLKIAKS-----EPPTLSQP 238 (292)
T ss_pred eecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHH-----HHHHHhcC-----CCccCCCC
Confidence 12446899999999999999999986432111 11111000 00111000
Q ss_pred cchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 442 ENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 442 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
......+.+++.+||+.+|++||+++|+++.
T Consensus 239 ---~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 269 (292)
T cd06644 239 ---SKWSMEFRDFLKTALDKHPETRPSAAQLLEH 269 (292)
T ss_pred ---cccCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 1123457788999999999999999999763
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=273.59 Aligned_cols=224 Identities=16% Similarity=0.229 Sum_probs=181.8
Q ss_pred cCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEee
Q 045127 238 NGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEW 316 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 316 (508)
++|+..+.||+|++|.||+|.. .+++.+++|.+...... ..+.+.+|++++++++||||+++++++......+++|||
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~ 81 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGD-DFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEY 81 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchh-hHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeC
Confidence 5788899999999999999997 45789999999654333 567889999999999999999999999999999999999
Q ss_pred cCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC------------
Q 045127 317 TNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE------------ 382 (508)
Q Consensus 317 ~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~------------ 382 (508)
+++++|.+++. ...+++.++..++.|++.||+|||+. +++|+||||+||+++.++.+||+|||.+
T Consensus 82 ~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~-~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~ 160 (262)
T cd06613 82 CGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHET-GKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAKRKS 160 (262)
T ss_pred CCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhC-CceecCCChhhEEECCCCCEEECccccchhhhhhhhcccc
Confidence 99999999987 36889999999999999999999999 9999999999999999999999999752
Q ss_pred ---------------C---CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcch
Q 045127 383 ---------------Y---QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENM 444 (508)
Q Consensus 383 ---------------~---~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 444 (508)
. .++.++||||||+++|||++|+.||........ ........+ ..+.+. ..
T Consensus 161 ~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~-~~~~~~~~~-------~~~~~~---~~ 229 (262)
T cd06613 161 FIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRA-LFLISKSNF-------PPPKLK---DK 229 (262)
T ss_pred ccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHhccC-------CCcccc---ch
Confidence 1 345578999999999999999999975432111 100000000 000010 11
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 445 FDQAEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 445 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
......+.+++.+||..+|.+|||+.+|+.
T Consensus 230 ~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 230 EKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred hhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 223456888999999999999999999875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-33 Score=274.39 Aligned_cols=222 Identities=15% Similarity=0.234 Sum_probs=170.3
Q ss_pred ceeeecCCeEEEEEEECCC---CEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEeecCCC
Q 045127 244 NLVGKNEGAAIYKGILRDG---TRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWTNGG 320 (508)
Q Consensus 244 ~~lg~G~~g~V~~~~~~~~---~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 320 (508)
+.||+|+||.||+|...++ ..+++|.+.........+.+.+|+..++.++||||+++++.+......++||||+++|
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 80 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELG 80 (268)
T ss_pred CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCC
Confidence 3589999999999985332 4567777765555556778999999999999999999999999989999999999999
Q ss_pred CHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC------------
Q 045127 321 NVELWLSE-----SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------------ 383 (508)
Q Consensus 321 sL~~~l~~-----~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------------ 383 (508)
+|.+++.. ...++..+..++.||+.||+|||+. +++||||||+||+++.++.+||+|||.+.
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~-~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~ 159 (268)
T cd05086 81 DLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKH-NFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETED 159 (268)
T ss_pred cHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC-CeeccCCccceEEEcCCccEEecccccccccCcchhhhccc
Confidence 99999872 3456677889999999999999999 99999999999999999999999998632
Q ss_pred ------------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhcc
Q 045127 384 ------------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERM 438 (508)
Q Consensus 384 ------------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 438 (508)
.++.++||||||+++|||++ |..||..... ...+.....+......++.+
T Consensus 160 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 234 (268)
T cd05086 160 DKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSD-----REVLNHVIKDQQVKLFKPQL 234 (268)
T ss_pred CCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHHHHhhcccccCCCcc
Confidence 11357899999999999997 5678754321 11111111111122223322
Q ss_pred cCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHH
Q 045127 439 MLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMIT 477 (508)
Q Consensus 439 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~ 477 (508)
... ....+.+++..|| .+|++||++++|++.|.
T Consensus 235 ~~~-----~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 235 ELP-----YSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred CCC-----CcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 211 1344566778899 67999999999998874
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage |
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-34 Score=284.22 Aligned_cols=214 Identities=15% Similarity=0.169 Sum_probs=168.2
Q ss_pred ceeeecCCeEEEEEEEC-CCCEEEEEEecCCC--CHHHHHHHHHHHHHHhhc-CCCCccceeeEEecCCeeEEEEeecCC
Q 045127 244 NLVGKNEGAAIYKGILR-DGTRVKIEIYKGDV--SREIRDEFVEECKLLVQF-QHKNLIRVLGWNNSRRTRAIVTEWTNG 319 (508)
Q Consensus 244 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~ 319 (508)
+.||+|+||.||+|... +++.||+|+++... .....+.+..|..++... +||||+++++++..++..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999974 57899999996432 122344556677777654 799999999999999999999999999
Q ss_pred CCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC---------------
Q 045127 320 GNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY--------------- 383 (508)
Q Consensus 320 gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~--------------- 383 (508)
|+|..++. ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++.
T Consensus 81 g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~-~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~~~~gt 159 (316)
T cd05592 81 GDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKK-GIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKASTFCGT 159 (316)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC-CEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCccccccCC
Confidence 99999887 56789999999999999999999999 99999999999999999999999998642
Q ss_pred ------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHHHHH
Q 045127 384 ------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQAEQG 451 (508)
Q Consensus 384 ------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l 451 (508)
.++.++|||||||++|||++|+.||...... +........ .+.+. ......+
T Consensus 160 ~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~-----~~~~~i~~~------~~~~~-----~~~~~~~ 223 (316)
T cd05592 160 PDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDED-----ELFDSILND------RPHFP-----RWISKEA 223 (316)
T ss_pred ccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHH-----HHHHHHHcC------CCCCC-----CCCCHHH
Confidence 2456799999999999999999999743221 111111000 00000 0123456
Q ss_pred HHHHHhcCCCCCCCCCCHH-HHHH
Q 045127 452 LGLGLMCTDQPTGKLPSLV-QIYN 474 (508)
Q Consensus 452 ~~l~~~Cl~~dP~~RPs~~-evl~ 474 (508)
.+++.+||+.||++||++. ++++
T Consensus 224 ~~ll~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05592 224 KDCLSKLFERDPTKRLGVDGDIRQ 247 (316)
T ss_pred HHHHHHHccCCHHHcCCChHHHHc
Confidence 6788999999999999875 5543
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-34 Score=280.28 Aligned_cols=232 Identities=16% Similarity=0.196 Sum_probs=184.8
Q ss_pred CCHHHHHHhhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhc-CCCCccceeeEEe
Q 045127 228 FTTWMLKAATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQF-QHKNLIRVLGWNN 305 (508)
Q Consensus 228 ~~~~~l~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~ 305 (508)
++++++..++++|+..+.||+|+||.||+|.. .+++.+|+|.+..... ....+.+|+.++.++ +|||++++++++.
T Consensus 12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~--~~~~~~~e~~~l~~l~~h~ni~~~~~~~~ 89 (291)
T cd06639 12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISD--VDEEIEAEYNILQSLPNHPNVVKFYGMFY 89 (291)
T ss_pred hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEeccccc--HHHHHHHHHHHHHHhcCCCCeEEEEEEEE
Confidence 56677788899999999999999999999997 5688999999854322 345678899999998 7999999999987
Q ss_pred cC-----CeeEEEEeecCCCCHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceE
Q 045127 306 SR-----RTRAIVTEWTNGGNVELWLS-----ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPL 375 (508)
Q Consensus 306 ~~-----~~~~lv~e~~~~gsL~~~l~-----~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~k 375 (508)
.. ...++||||+++++|.++++ ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.+|
T Consensus 90 ~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~ivH~dlkp~nili~~~~~~k 168 (291)
T cd06639 90 KADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNN-RIIHRDVKGNNILLTTEGGVK 168 (291)
T ss_pred eccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHHHEEEcCCCCEE
Confidence 53 35799999999999999875 45789999999999999999999999 999999999999999999999
Q ss_pred EeeccCCC--------------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHH
Q 045127 376 ISRFKIEY--------------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIR 423 (508)
Q Consensus 376 l~Dfg~~~--------------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~ 423 (508)
|+|||.+. .++.++|||||||++|||++|+.||....... .+..+..
T Consensus 169 l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~-~~~~~~~ 247 (291)
T cd06639 169 LVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVK-TLFKIPR 247 (291)
T ss_pred EeecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHH-HHHHHhc
Confidence 99998531 13568999999999999999999997532111 1111100
Q ss_pred HhccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 424 MHYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 424 ~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
.. . +.+... ......+.+++.+||+.+|++||++.|+++.
T Consensus 248 -~~---~-----~~~~~~---~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 287 (291)
T cd06639 248 -NP---P-----PTLLHP---EKWCRSFNHFISQCLIKDFEARPSVTHLLEH 287 (291)
T ss_pred -CC---C-----CCCCcc---cccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 00 0 011111 1123467889999999999999999999864
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-34 Score=275.02 Aligned_cols=214 Identities=21% Similarity=0.310 Sum_probs=168.3
Q ss_pred ceeeecCCeEEEEEEECC-------------CCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCee
Q 045127 244 NLVGKNEGAAIYKGILRD-------------GTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTR 310 (508)
Q Consensus 244 ~~lg~G~~g~V~~~~~~~-------------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 310 (508)
+.||+|+||.||+|.+.+ ...|++|.+.... ......+.+|+.+++.++||||+++++++......
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~-~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~ 79 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH-RDISLAFFETASMMRQVSHKHIVLLYGVCVRDVEN 79 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhh-hhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCC
Confidence 468999999999998532 2258889875432 33456788999999999999999999999998889
Q ss_pred EEEEeecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCc-------eEEeeccC
Q 045127 311 AIVTEWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLE-------PLISRFKI 381 (508)
Q Consensus 311 ~lv~e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~-------~kl~Dfg~ 381 (508)
+++|||+++|+|..++. ...+++..+..++.||++||+|||++ +|+||||||+||+++.++. ++++|||.
T Consensus 80 ~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~ 158 (262)
T cd05077 80 IMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDK-DLVHGNVCTKNILLAREGIDGECGPFIKLSDPGI 158 (262)
T ss_pred EEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhC-CeECCCCCcccEEEecCCccCCCCceeEeCCCCC
Confidence 99999999999999887 45689999999999999999999999 9999999999999986654 89999986
Q ss_pred C------------------------CCCCCcchhhHHHHHHHHHH-hCCCCCcccccCcccHHHHHHHhccchhhhhhhh
Q 045127 382 E------------------------YQHRSTKYVYKFGLFLLEMI-TNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDE 436 (508)
Q Consensus 382 ~------------------------~~~~~~~Dv~SlGvil~ell-tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (508)
+ ..++.++|||||||++|||+ +|+.||......+ .... . ..
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~--~~~~----~--------~~ 224 (262)
T cd05077 159 PITVLSRQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAE--KERF----Y--------EG 224 (262)
T ss_pred CccccCcccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhH--HHHH----H--------hc
Confidence 3 22455789999999999997 5888876432111 0000 0 00
Q ss_pred cccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHH
Q 045127 437 RMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMI 476 (508)
Q Consensus 437 ~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L 476 (508)
...... .....+.+++.+||+.||.+||++.+|++.+
T Consensus 225 ~~~~~~---~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 225 QCMLVT---PSCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred CccCCC---CChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 000000 1134577899999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-34 Score=288.13 Aligned_cols=211 Identities=15% Similarity=0.167 Sum_probs=169.7
Q ss_pred ceeeecCCeEEEEEEE----CCCCEEEEEEecCCCC-HHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEeecC
Q 045127 244 NLVGKNEGAAIYKGIL----RDGTRVKIEIYKGDVS-REIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWTN 318 (508)
Q Consensus 244 ~~lg~G~~g~V~~~~~----~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 318 (508)
+.||+|+||.||+++. .+|+.||+|++..... ......+..|++++++++||||+++++++..+...|+||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 6799999999999875 3578999999964321 2234567889999999999999999999999999999999999
Q ss_pred CCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC--------------
Q 045127 319 GGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY-------------- 383 (508)
Q Consensus 319 ~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~-------------- 383 (508)
+|+|.+++. ...+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 82 ~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g 160 (318)
T cd05582 82 GGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSL-GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCG 160 (318)
T ss_pred CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC-CEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCceecccC
Confidence 999999987 56789999999999999999999999 99999999999999999999999998642
Q ss_pred -------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHHHH
Q 045127 384 -------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQAEQ 450 (508)
Q Consensus 384 -------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 450 (508)
.++.++|||||||++|||++|+.||...... ....... ........ .....
T Consensus 161 ~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~-----~~~~~i~--------~~~~~~p~---~~~~~ 224 (318)
T cd05582 161 TVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRK-----ETMTMIL--------KAKLGMPQ---FLSPE 224 (318)
T ss_pred ChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHH-----HHHHHHH--------cCCCCCCC---CCCHH
Confidence 2356899999999999999999999743211 1111111 11110000 11345
Q ss_pred HHHHHHhcCCCCCCCCCCHHH
Q 045127 451 GLGLGLMCTDQPTGKLPSLVQ 471 (508)
Q Consensus 451 l~~l~~~Cl~~dP~~RPs~~e 471 (508)
+.+++.+||+.||++||++.+
T Consensus 225 ~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 225 AQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred HHHHHHHHhhcCHhHcCCCCC
Confidence 677889999999999999544
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-34 Score=283.87 Aligned_cols=232 Identities=13% Similarity=0.146 Sum_probs=176.4
Q ss_pred CCceeeec--CCeEEEEEEE-CCCCEEEEEEecCCCC-HHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEeec
Q 045127 242 KKNLVGKN--EGAAIYKGIL-RDGTRVKIEIYKGDVS-REIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWT 317 (508)
Q Consensus 242 ~~~~lg~G--~~g~V~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 317 (508)
..++||+| +|++||++.. .+|+.||+|.+..... ......+.+|+++++.++||||+++++++..++..++||||+
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 81 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 81 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence 35789999 6789999987 5789999999965432 334567788999999999999999999999999999999999
Q ss_pred CCCCHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC------------
Q 045127 318 NGGNVELWLS---ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE------------ 382 (508)
Q Consensus 318 ~~gsL~~~l~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~------------ 382 (508)
++|+|.+++. ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++.++++||+..
T Consensus 82 ~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~~ 160 (327)
T cd08227 82 AYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHM-GYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLRV 160 (327)
T ss_pred CCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC-CEecCCCChhhEEEecCCcEEEcccchhhccccccccccc
Confidence 9999999986 34589999999999999999999999 9999999999999999999999998420
Q ss_pred ------------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchh------hh
Q 045127 383 ------------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENL------QL 432 (508)
Q Consensus 383 ------------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~------~~ 432 (508)
..++.++|||||||++|||++|+.||........ .........+... .+
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 239 (327)
T cd08227 161 VHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQM-LLEKLNGTVPCLLDTTTIPAE 239 (327)
T ss_pred cccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHH-HHHHhcCCccccccccchhhh
Confidence 1356789999999999999999999975432211 1111100000000 00
Q ss_pred ---------hhhhcc----------------cCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 433 ---------VVDERM----------------MLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 433 ---------~~~~~l----------------~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
..+... ............+.+++.+||+.||++|||++|+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~ 307 (327)
T cd08227 240 ELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 307 (327)
T ss_pred hcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcC
Confidence 000000 0000011224567889999999999999999999873
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype |
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-34 Score=277.56 Aligned_cols=225 Identities=16% Similarity=0.208 Sum_probs=179.2
Q ss_pred cCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEee
Q 045127 238 NGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEW 316 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 316 (508)
++|+..+.||+|+||.||+|.. .+++.||+|.++.... .....+.+|+.+++.++||||+++++++...+..++||||
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~ 87 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPG-EDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEF 87 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEec
Confidence 4677789999999999999986 4689999999865432 2455688999999999999999999999999999999999
Q ss_pred cCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC------------
Q 045127 317 TNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------------ 383 (508)
Q Consensus 317 ~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------------ 383 (508)
+++++|.+++. ...+++.++..++.|++.|+.|||+. |++|+||||+||+++.++.++|+|||.+.
T Consensus 88 ~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~ 166 (267)
T cd06645 88 CGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSK-GKMHRDIKGANILLTDNGHVKLADFGVSAQITATIAKRKSF 166 (267)
T ss_pred cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEECCCCCEEECcceeeeEccCcccccccc
Confidence 99999999987 56789999999999999999999999 99999999999999999999999998631
Q ss_pred ------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchH
Q 045127 384 ------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMF 445 (508)
Q Consensus 384 ------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 445 (508)
.++.++|||||||++|||++|+.||........ ......... ..+..... .
T Consensus 167 ~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~-~~~~~~~~~-------~~~~~~~~---~ 235 (267)
T cd06645 167 IGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRA-LFLMTKSNF-------QPPKLKDK---M 235 (267)
T ss_pred cCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhh-HHhhhccCC-------CCCccccc---C
Confidence 134578999999999999999999864332111 100000000 00001000 0
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 446 DQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 446 ~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
.....+.+++.+|++.+|++|||++++++.
T Consensus 236 ~~~~~~~~li~~~l~~~P~~R~~~~~ll~~ 265 (267)
T cd06645 236 KWSNSFHHFVKMALTKNPKKRPTAEKLLQH 265 (267)
T ss_pred CCCHHHHHHHHHHccCCchhCcCHHHHhcC
Confidence 112356789999999999999999998763
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-34 Score=299.23 Aligned_cols=219 Identities=14% Similarity=0.147 Sum_probs=175.9
Q ss_pred CCCCCceeeecCCeEEEEEEEC-C-CCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEee
Q 045127 239 GFSKKNLVGKNEGAAIYKGILR-D-GTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEW 316 (508)
Q Consensus 239 ~~~~~~~lg~G~~g~V~~~~~~-~-~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 316 (508)
.|...+.||+|++|.||+|... + ++.||+|.+... .......+.+|+.+++.++||||+++++++..++..++||||
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~-~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~ 146 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLN-DERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEY 146 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccC-CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEEC
Confidence 4888999999999999999863 3 678888877433 333456778899999999999999999999999999999999
Q ss_pred cCCCCHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC--------
Q 045127 317 TNGGNVELWLS-----ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY-------- 383 (508)
Q Consensus 317 ~~~gsL~~~l~-----~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~-------- 383 (508)
+++|+|.+++. ...+++.++..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||++.
T Consensus 147 ~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~-~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~ 225 (478)
T PTZ00267 147 GSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR-KMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSL 225 (478)
T ss_pred CCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC-CEEECCcCHHhEEECCCCcEEEEeCcCceecCCcccc
Confidence 99999998775 34688999999999999999999999 99999999999999999999999998742
Q ss_pred ---------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCc
Q 045127 384 ---------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTE 442 (508)
Q Consensus 384 ---------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 442 (508)
.++.++|||||||++|||++|+.||..... ........... .++ . .
T Consensus 226 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~-----~~~~~~~~~~~----~~~-~--~- 292 (478)
T PTZ00267 226 DVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQ-----REIMQQVLYGK----YDP-F--P- 292 (478)
T ss_pred ccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHhCC----CCC-C--C-
Confidence 235578999999999999999999964321 11111111000 000 0 0
Q ss_pred chHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 443 NMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 443 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
......+.+++.+||+.||++||++.+++.
T Consensus 293 --~~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 293 --CPVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred --ccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 112346778999999999999999999874
|
|
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-34 Score=281.08 Aligned_cols=223 Identities=13% Similarity=0.182 Sum_probs=181.8
Q ss_pred cCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEee
Q 045127 238 NGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEW 316 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 316 (508)
.+|+..+.||.|++|.||+|.. .+++.|++|.+...... ..+.+.+|+..++.++|||++++++++...+..++||||
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~-~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 97 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQP-KKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEY 97 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCc-hHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEe
Confidence 4688899999999999999986 57899999998644332 456788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-------------
Q 045127 317 TNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------------- 383 (508)
Q Consensus 317 ~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------------- 383 (508)
+++++|..++....+++.++..++.|++.|++|||+. |++||||||+||+++.++.+||+|||++.
T Consensus 98 ~~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~-~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 176 (296)
T cd06655 98 LAGGSLTDVVTETCMDEAQIAAVCRECLQALEFLHAN-QVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKRSTMV 176 (296)
T ss_pred cCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEECCCCCEEEccCccchhcccccccCCCcC
Confidence 9999999999877899999999999999999999999 99999999999999999999999998631
Q ss_pred --------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHHH
Q 045127 384 --------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQAE 449 (508)
Q Consensus 384 --------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 449 (508)
.++.++|||||||++|++++|+.||........ .. ...... .+.+... .....
T Consensus 177 ~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~-~~-~~~~~~--------~~~~~~~---~~~~~ 243 (296)
T cd06655 177 GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA-LY-LIATNG--------TPELQNP---EKLSP 243 (296)
T ss_pred CCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HH-HHHhcC--------CcccCCc---ccCCH
Confidence 235679999999999999999999975332111 10 010000 0001111 11234
Q ss_pred HHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 450 QGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 450 ~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
.+.+++.+||..||.+|||+.++++.
T Consensus 244 ~~~~li~~~l~~dp~~Rpt~~~il~~ 269 (296)
T cd06655 244 IFRDFLNRCLEMDVEKRGSAKELLQH 269 (296)
T ss_pred HHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 56778899999999999999999864
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-34 Score=280.72 Aligned_cols=232 Identities=15% Similarity=0.206 Sum_probs=182.7
Q ss_pred CCHHHHHHhhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhc-CCCCccceeeEEe
Q 045127 228 FTTWMLKAATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQF-QHKNLIRVLGWNN 305 (508)
Q Consensus 228 ~~~~~l~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~ 305 (508)
+.++.+..+.++|+..+.||+|+||.||+|.. .+++.+|+|++..... ....+.+|+.+++++ +||||+++++++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~--~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 85 (286)
T cd06638 8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHD--IDEEIEAEYNILKALSDHPNVVKFYGMYY 85 (286)
T ss_pred EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccc--hHHHHHHHHHHHHHHhcCCCeeeeeeeee
Confidence 44566778899999999999999999999987 4688999998854322 245678899999999 6999999999874
Q ss_pred -----cCCeeEEEEeecCCCCHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceE
Q 045127 306 -----SRRTRAIVTEWTNGGNVELWLS-----ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPL 375 (508)
Q Consensus 306 -----~~~~~~lv~e~~~~gsL~~~l~-----~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~k 375 (508)
.+...++||||+++++|.+++. ...+++..+..++.|+++||.|||+. +++||||||+||+++.++.++
T Consensus 86 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlkp~nili~~~~~~k 164 (286)
T cd06638 86 KKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVN-KTIHRDVKGNNILLTTEGGVK 164 (286)
T ss_pred ecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhC-CccccCCCHHhEEECCCCCEE
Confidence 3456899999999999998864 35688999999999999999999999 999999999999999999999
Q ss_pred EeeccCCC--------------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHH
Q 045127 376 ISRFKIEY--------------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIR 423 (508)
Q Consensus 376 l~Dfg~~~--------------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~ 423 (508)
++|||.+. .++.++|||||||++|||++|+.||....... ....
T Consensus 165 l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~----~~~~ 240 (286)
T cd06638 165 LVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMR----ALFK 240 (286)
T ss_pred EccCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhH----HHhh
Confidence 99998631 13558999999999999999999987532211 1100
Q ss_pred HhccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 424 MHYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 424 ~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
. .. ...+...... .....+.+++.+||+.||++|||+.|+++.
T Consensus 241 -~-~~----~~~~~~~~~~---~~~~~~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 241 -I-PR----NPPPTLHQPE---LWSNEFNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred -c-cc----cCCCcccCCC---CcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence 0 00 0001110110 113457789999999999999999999875
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-34 Score=277.50 Aligned_cols=218 Identities=12% Similarity=0.119 Sum_probs=170.3
Q ss_pred eeecCCeEEEEEEE-CCCCEEEEEEecCCCCH--HHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEeecCCCCH
Q 045127 246 VGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSR--EIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWTNGGNV 322 (508)
Q Consensus 246 lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 322 (508)
||+|+||.||++.. .+|+.+|+|.+...... .....+..|++++++++||||+++++++..+...++||||+++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 69999999999997 46899999998642211 1234566799999999999999999999999999999999999999
Q ss_pred HHHhc---cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC-----------------
Q 045127 323 ELWLS---ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE----------------- 382 (508)
Q Consensus 323 ~~~l~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~----------------- 382 (508)
.+++. ...+++..+..++.|++.||+|||+. |++||||||+||+++.++.++|+|||++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~ 159 (277)
T cd05607 81 KYHIYNVGERGLEMERVIHYSAQITCGILHLHSM-DIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTITQRAGTNG 159 (277)
T ss_pred HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC-CEEEccCChHhEEEcCCCCEEEeeceeeeecCCCceeeccCCCCC
Confidence 98875 34588999999999999999999999 9999999999999999999999999863
Q ss_pred ---------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHHHHHHH
Q 045127 383 ---------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQAEQGLG 453 (508)
Q Consensus 383 ---------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~ 453 (508)
..++.++||||+||++|||++|+.||....... .......... ...+.... ......+.+
T Consensus 160 y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~-~~~~~~~~~~--------~~~~~~~~--~~~~~~~~~ 228 (277)
T cd05607 160 YMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKV-AKEELKRRTL--------EDEVKFEH--QNFTEESKD 228 (277)
T ss_pred ccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchh-hHHHHHHHhh--------cccccccc--ccCCHHHHH
Confidence 234668999999999999999999997432211 1111111111 11110000 012445778
Q ss_pred HHHhcCCCCCCCCCCHHHHHHH
Q 045127 454 LGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 454 l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
++.+||+.||.+||++.|+++.
T Consensus 229 li~~~L~~~P~~R~~~~~~~~~ 250 (277)
T cd05607 229 ICRLFLAKKPEDRLGSREKNDD 250 (277)
T ss_pred HHHHHhccCHhhCCCCccchhh
Confidence 9999999999999999776543
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-34 Score=295.35 Aligned_cols=224 Identities=11% Similarity=0.070 Sum_probs=174.5
Q ss_pred cCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCC--CHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEE
Q 045127 238 NGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDV--SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVT 314 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 314 (508)
++|+..+.||+|+||.||+|+. .+++.||+|++.... .......+.+|++++++++||||+++++.+.+++..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence 3688999999999999999997 468999999985321 1123566889999999999999999999999999999999
Q ss_pred eecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC----------
Q 045127 315 EWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY---------- 383 (508)
Q Consensus 315 e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~---------- 383 (508)
||+++|+|.+++. ...+++..+..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||++.
T Consensus 81 E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~-~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~ 159 (376)
T cd05598 81 DYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKM-GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKY 159 (376)
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEeCCCCHHHEEECCCCCEEEEeCCCCccccccccccc
Confidence 9999999999987 55678899999999999999999999 99999999999999999999999999741
Q ss_pred ------------------------------------------------------------CCCCcchhhHHHHHHHHHHh
Q 045127 384 ------------------------------------------------------------QHRSTKYVYKFGLFLLEMIT 403 (508)
Q Consensus 384 ------------------------------------------------------------~~~~~~Dv~SlGvil~ellt 403 (508)
.++.++|||||||++|||++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell~ 239 (376)
T cd05598 160 YQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLV 239 (376)
T ss_pred cccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeehhh
Confidence 23457899999999999999
Q ss_pred CCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCC---CHHHHHHH
Q 045127 404 NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLP---SLVQIYNM 475 (508)
Q Consensus 404 g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP---s~~evl~~ 475 (508)
|+.||......+. ...+. .+.... .+.... .....+.+++.+|+ .+|.+|+ ++.|+++.
T Consensus 240 G~~Pf~~~~~~~~--~~~i~-~~~~~~------~~~~~~---~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h 301 (376)
T cd05598 240 GQPPFLADTPAET--QLKVI-NWETTL------HIPSQA---KLSREASDLILRLC-CGAEDRLGKNGADEIKAH 301 (376)
T ss_pred CCCCCCCCCHHHH--HHHHh-ccCccc------cCCCCC---CCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCC
Confidence 9999975432111 00000 000000 000000 11233445555655 4999999 89999865
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-33 Score=276.84 Aligned_cols=221 Identities=17% Similarity=0.231 Sum_probs=177.3
Q ss_pred CCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEeecC
Q 045127 240 FSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWTN 318 (508)
Q Consensus 240 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 318 (508)
|+..+.||+|+||.||+|... ++..+++|.+... .....+.+.+|+++++.++|||++++++++..+...++||||++
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~ 85 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTK-SEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCA 85 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCC-CHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecC
Confidence 566788999999999999974 5788899998543 33456778999999999999999999999999999999999999
Q ss_pred CCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-------------
Q 045127 319 GGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------------- 383 (508)
Q Consensus 319 ~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------------- 383 (508)
+++|..++. ...+++..+..++.|+++||+|||+. |++||||||+||+++.++.+|++|||++.
T Consensus 86 ~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~-~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 164 (282)
T cd06643 86 GGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHEN-KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFI 164 (282)
T ss_pred CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCCcccEEEccCCCEEEcccccccccccccccccccc
Confidence 999998875 46789999999999999999999999 99999999999999999999999998642
Q ss_pred -------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcch
Q 045127 384 -------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENM 444 (508)
Q Consensus 384 -------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 444 (508)
.++.++|||||||++|||++|+.||....... ....... .. .+.+...
T Consensus 165 ~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~-~~~~~~~-~~--------~~~~~~~--- 231 (282)
T cd06643 165 GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMR-VLLKIAK-SE--------PPTLAQP--- 231 (282)
T ss_pred ccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHH-HHHHHhh-cC--------CCCCCCc---
Confidence 12347999999999999999999987432111 0111100 00 0011000
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 445 FDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 445 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
......+.+++.+||+.||.+||++.++++.
T Consensus 232 ~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 262 (282)
T cd06643 232 SRWSSEFKDFLKKCLEKNVDARWTTTQLLQH 262 (282)
T ss_pred cccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1123467789999999999999999998764
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-34 Score=279.83 Aligned_cols=237 Identities=13% Similarity=0.164 Sum_probs=178.1
Q ss_pred hhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEE
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVT 314 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 314 (508)
++++|...+.||+|+||.||+|.. .+++.||+|.+...........+.+|+.+++.++|+||+++.+++..+...++||
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 82 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF 82 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence 467899999999999999999986 4689999999865433333456788999999999999999999999999999999
Q ss_pred eecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC---------
Q 045127 315 EWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY--------- 383 (508)
Q Consensus 315 e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~--------- 383 (508)
||+. +++.+++. ...+++..+..++.|++.||+|||+. +++|+||||+||+++.++.+||+|||.+.
T Consensus 83 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~-~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~ 160 (291)
T cd07870 83 EYMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQ-HILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQTY 160 (291)
T ss_pred eccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCChHHEEEcCCCcEEEeccccccccCCCCCCC
Confidence 9996 67776665 35678889999999999999999999 99999999999999999999999998532
Q ss_pred -------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHH-hccch-h-----------h
Q 045127 384 -------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRM-HYPEN-L-----------Q 431 (508)
Q Consensus 384 -------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~-~~~~~-~-----------~ 431 (508)
.++.++||||||+++|||++|+.||+........+...... ..+.. . .
T Consensus 161 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (291)
T cd07870 161 SSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKP 240 (291)
T ss_pred CCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccc
Confidence 13456899999999999999999997543221111111000 00000 0 0
Q ss_pred hhhh----hcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 432 LVVD----ERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 432 ~~~~----~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
.... +.+............+.+++.+|++.||++|||+.|++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 241 EWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred hhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence 0000 000000000011346678899999999999999999875
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-34 Score=284.56 Aligned_cols=219 Identities=16% Similarity=0.189 Sum_probs=174.7
Q ss_pred CCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCC--HHHHHHHHHHHHHHhhc-CCCCccceeeEEecCCeeEEEE
Q 045127 239 GFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVS--REIRDEFVEECKLLVQF-QHKNLIRVLGWNNSRRTRAIVT 314 (508)
Q Consensus 239 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~ 314 (508)
+|+..+.||+|+||.||+|... +++.||+|++..... ......+..|..++..+ +|++|+++++++...+..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 4788899999999999999974 578999999974322 22345567788888877 5899999999999999999999
Q ss_pred eecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC----------
Q 045127 315 EWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY---------- 383 (508)
Q Consensus 315 e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~---------- 383 (508)
||+++|+|.+++. ...+++.++..++.|++.||+|||++ ||+||||||+|||++.++.+||+|||++.
T Consensus 81 E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~~~~ 159 (323)
T cd05616 81 EYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSK-GIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVTTK 159 (323)
T ss_pred cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC-CEEecCCCHHHeEECCCCcEEEccCCCceecCCCCCccc
Confidence 9999999999887 56789999999999999999999999 99999999999999999999999998642
Q ss_pred -----------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHH
Q 045127 384 -----------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFD 446 (508)
Q Consensus 384 -----------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 446 (508)
.++.++|||||||++|||+||+.||...... .+...+. ........ .
T Consensus 160 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~--~~~~~i~-----------~~~~~~p~---~ 223 (323)
T cd05616 160 TFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED--ELFQSIM-----------EHNVAYPK---S 223 (323)
T ss_pred cCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHH--HHHHHHH-----------hCCCCCCC---c
Confidence 2456899999999999999999999753321 1111111 11110011 1
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCH-----HHHHH
Q 045127 447 QAEQGLGLGLMCTDQPTGKLPSL-----VQIYN 474 (508)
Q Consensus 447 ~~~~l~~l~~~Cl~~dP~~RPs~-----~evl~ 474 (508)
....+.+++.+|++.||++|++. .++.+
T Consensus 224 ~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~ 256 (323)
T cd05616 224 MSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 256 (323)
T ss_pred CCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhc
Confidence 23456788999999999999984 56654
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-34 Score=284.64 Aligned_cols=210 Identities=16% Similarity=0.157 Sum_probs=166.4
Q ss_pred ceeeecCCeEEEEEEE-CCCCEEEEEEecCCCC--HHHHHHHHHHHH-HHhhcCCCCccceeeEEecCCeeEEEEeecCC
Q 045127 244 NLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVS--REIRDEFVEECK-LLVQFQHKNLIRVLGWNNSRRTRAIVTEWTNG 319 (508)
Q Consensus 244 ~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 319 (508)
+.||+|+||.||+|.. .+|+.||+|++..... ......+..|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 4699999999999997 4689999999864321 122344555554 56789999999999999999999999999999
Q ss_pred CCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC---------------
Q 045127 320 GNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY--------------- 383 (508)
Q Consensus 320 gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~--------------- 383 (508)
|+|..++. ...+++..+..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||++.
T Consensus 81 g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~-givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt 159 (323)
T cd05575 81 GELFFHLQRERSFPEPRARFYAAEIASALGYLHSL-NIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTSTFCGT 159 (323)
T ss_pred CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCccccccCC
Confidence 99999887 56789999999999999999999999 99999999999999999999999998632
Q ss_pred ------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHHHHH
Q 045127 384 ------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQAEQG 451 (508)
Q Consensus 384 ------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l 451 (508)
.++.++|||||||++|||++|+.||..... .+...... ........ .....+
T Consensus 160 ~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~-----~~~~~~i~--------~~~~~~~~---~~~~~~ 223 (323)
T cd05575 160 PEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDT-----AEMYDNIL--------NKPLRLKP---NISVSA 223 (323)
T ss_pred hhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCH-----HHHHHHHH--------cCCCCCCC---CCCHHH
Confidence 245679999999999999999999974321 11111111 11111111 114456
Q ss_pred HHHHHhcCCCCCCCCCCHH
Q 045127 452 LGLGLMCTDQPTGKLPSLV 470 (508)
Q Consensus 452 ~~l~~~Cl~~dP~~RPs~~ 470 (508)
.+++.+|++.||.+||++.
T Consensus 224 ~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 224 RHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred HHHHHHHhhcCHHhCCCCC
Confidence 7888999999999999984
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-34 Score=283.24 Aligned_cols=213 Identities=16% Similarity=0.193 Sum_probs=169.8
Q ss_pred ceeeecCCeEEEEEEEC-CCCEEEEEEecCCCC--HHHHHHHHHHHHHHhhc-CCCCccceeeEEecCCeeEEEEeecCC
Q 045127 244 NLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVS--REIRDEFVEECKLLVQF-QHKNLIRVLGWNNSRRTRAIVTEWTNG 319 (508)
Q Consensus 244 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~ 319 (508)
+.||+|+||.||+|... +|+.||+|.++.... ......+..|..++... +||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 46999999999999974 688999999964321 12345667788888764 899999999999999999999999999
Q ss_pred CCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC---------------
Q 045127 320 GNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY--------------- 383 (508)
Q Consensus 320 gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~--------------- 383 (508)
|+|..++. ...+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++.
T Consensus 81 g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt 159 (316)
T cd05620 81 GDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSK-GIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRASTFCGT 159 (316)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCCHHHeEECCCCCEEeCccCCCeecccCCCceeccCCC
Confidence 99999887 56789999999999999999999999 99999999999999999999999998642
Q ss_pred ------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHHHHH
Q 045127 384 ------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQAEQG 451 (508)
Q Consensus 384 ------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l 451 (508)
.++.++|||||||++|||++|+.||...... .+.+.+... .+.+.. .....+
T Consensus 160 ~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~--~~~~~~~~~---------~~~~~~-----~~~~~~ 223 (316)
T cd05620 160 PDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDED--ELFESIRVD---------TPHYPR-----WITKES 223 (316)
T ss_pred cCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH--HHHHHHHhC---------CCCCCC-----CCCHHH
Confidence 3456899999999999999999999743211 111111100 011110 123456
Q ss_pred HHHHHhcCCCCCCCCCCHH-HHH
Q 045127 452 LGLGLMCTDQPTGKLPSLV-QIY 473 (508)
Q Consensus 452 ~~l~~~Cl~~dP~~RPs~~-evl 473 (508)
.+++.+|++.||++||++. ++.
T Consensus 224 ~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 224 KDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred HHHHHHHccCCHHHcCCChHHHH
Confidence 7788999999999999984 565
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-33 Score=273.80 Aligned_cols=221 Identities=17% Similarity=0.245 Sum_probs=181.7
Q ss_pred CCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEeec
Q 045127 239 GFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWT 317 (508)
Q Consensus 239 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 317 (508)
-|+..+.||+|+||.||+|.. .+++.||+|.+.........+.+.+|+..+++++||||+++++++..+...++||||+
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL 84 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeC
Confidence 366778999999999999986 4689999999865544445678899999999999999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC---------------
Q 045127 318 NGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE--------------- 382 (508)
Q Consensus 318 ~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~--------------- 382 (508)
++++|.+++....+++..+..++.|++.|+.|||+. |++|+||||+||+++.++.++++|||.+
T Consensus 85 ~~~~l~~~i~~~~~~~~~~~~~~~~l~~~l~~lh~~-~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~ 163 (277)
T cd06641 85 GGGSALDLLEPGPLDETQIATILREILKGLDYLHSE-KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVG 163 (277)
T ss_pred CCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHccC-CeecCCCCHHhEEECCCCCEEEeecccceecccchhhhccccC
Confidence 999999999878899999999999999999999999 9999999999999999999999999853
Q ss_pred ------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHHHH
Q 045127 383 ------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQAEQ 450 (508)
Q Consensus 383 ------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 450 (508)
...+.++|||||||++|+|++|..||....... ....+.... .+.+. ......
T Consensus 164 ~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~--~~~~~~~~~--------~~~~~-----~~~~~~ 228 (277)
T cd06641 164 TPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMK--VLFLIPKNN--------PPTLE-----GNYSKP 228 (277)
T ss_pred CccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHH--HHHHHhcCC--------CCCCC-----cccCHH
Confidence 123457899999999999999999986432111 111110000 00010 112355
Q ss_pred HHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 451 GLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 451 l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
+.+++.+||+.+|.+||++.++++.
T Consensus 229 ~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 229 LKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred HHHHHHHHccCChhhCcCHHHHHhC
Confidence 7788999999999999999999985
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-33 Score=279.83 Aligned_cols=223 Identities=18% Similarity=0.216 Sum_probs=181.2
Q ss_pred cCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCH--HHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEE
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSR--EIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVT 314 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 314 (508)
++|+..+.||+|++|.||+|... +++.||+|.+...... ...+.+..|+++++.++||||+++++.+......++||
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 36888899999999999999975 5899999999754332 25667899999999999999999999999999999999
Q ss_pred eecCCCCHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC--------
Q 045127 315 EWTNGGNVELWLS---ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY-------- 383 (508)
Q Consensus 315 e~~~~gsL~~~l~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~-------- 383 (508)
||+.+++|.+++. ...+++..+..++.|++.||+|||+. |++||||||+||+++.++.++|+|||++.
T Consensus 81 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~ 159 (316)
T cd05574 81 DYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLL-GIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPP 159 (316)
T ss_pred EecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHC-CeeccCCChHHeEEcCCCCEEEeecchhhcccccccc
Confidence 9999999999987 35689999999999999999999999 99999999999999999999999998632
Q ss_pred ------------------------------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCc
Q 045127 384 ------------------------------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGE 415 (508)
Q Consensus 384 ------------------------------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~ 415 (508)
.++.++||||||+++|+|++|+.||.......
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~ 239 (316)
T cd05574 160 VSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDE 239 (316)
T ss_pred cccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchHH
Confidence 13447899999999999999999997433211
Q ss_pred ccHHHHHHHhccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCC----HHHHHHH
Q 045127 416 AGFIEYIRMHYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPS----LVQIYNM 475 (508)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs----~~evl~~ 475 (508)
.+ ..+.+...... ........+.+++.+||+.||++||| ++|+++.
T Consensus 240 -~~------------~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~ 289 (316)
T cd05574 240 -TF------------SNILKKEVTFP-GSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQH 289 (316)
T ss_pred -HH------------HHHhcCCccCC-CccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcC
Confidence 11 11111111100 00113567888999999999999999 7887773
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-34 Score=289.69 Aligned_cols=233 Identities=12% Similarity=0.072 Sum_probs=182.4
Q ss_pred HHHHHHhhcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCC--CHHHHHHHHHHHHHHhhcCCCCccceeeEEec
Q 045127 230 TWMLKAATNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDV--SREIRDEFVEECKLLVQFQHKNLIRVLGWNNS 306 (508)
Q Consensus 230 ~~~l~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 306 (508)
..++....++|+..+.||+|+||.||+|... +++.+|+|++.... .....+.+.+|..+++.++||||+++++++.+
T Consensus 35 ~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~ 114 (371)
T cd05622 35 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 114 (371)
T ss_pred HhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc
Confidence 3455566789999999999999999999974 68899999985321 22234567899999999999999999999999
Q ss_pred CCeeEEEEeecCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC---
Q 045127 307 RRTRAIVTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY--- 383 (508)
Q Consensus 307 ~~~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~--- 383 (508)
+...++||||+++|+|.+++....+++..+..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||++.
T Consensus 115 ~~~~~lv~Ey~~gg~L~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~ 193 (371)
T cd05622 115 DRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSM-GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMN 193 (371)
T ss_pred CCEEEEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHC-CEEeCCCCHHHEEECCCCCEEEEeCCceeEcC
Confidence 99999999999999999999877899999999999999999999999 99999999999999999999999998641
Q ss_pred -----------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhh
Q 045127 384 -----------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVV 434 (508)
Q Consensus 384 -----------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (508)
.++.++|||||||++|||++|+.||..... ........... .
T Consensus 194 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~-----~~~~~~i~~~~-~--- 264 (371)
T cd05622 194 KEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL-----VGTYSKIMNHK-N--- 264 (371)
T ss_pred cCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCH-----HHHHHHHHcCC-C---
Confidence 145689999999999999999999974321 11111111000 0
Q ss_pred hhcccCCcchHHHHHHHHHHHHhcCCCCCCC--CCCHHHHHHH
Q 045127 435 DERMMLTENMFDQAEQGLGLGLMCTDQPTGK--LPSLVQIYNM 475 (508)
Q Consensus 435 ~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~--RPs~~evl~~ 475 (508)
...+... ......+.+++..|+..++.+ ||+++|+++.
T Consensus 265 ~~~~~~~---~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h 304 (371)
T cd05622 265 SLTFPDD---NDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 304 (371)
T ss_pred cccCCCc---CCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcC
Confidence 0000000 112445667788898744433 7899999885
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-34 Score=292.20 Aligned_cols=172 Identities=12% Similarity=0.104 Sum_probs=153.0
Q ss_pred CCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCC--CHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEe
Q 045127 239 GFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDV--SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTE 315 (508)
Q Consensus 239 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 315 (508)
.|+..+.||+|+||.||+|+. .+++.||+|++.... .......+.+|++++++++||||+++++.+.++...++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 588889999999999999997 468899999986432 12345678899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-----------
Q 045127 316 WTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY----------- 383 (508)
Q Consensus 316 ~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~----------- 383 (508)
|+++|+|.+++. ...+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||++.
T Consensus 82 ~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~-~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~~ 160 (382)
T cd05625 82 YIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKM-GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYY 160 (382)
T ss_pred CCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEECCCCCEEEeECCCCcccccccccccc
Confidence 999999999987 45688999999999999999999999 99999999999999999999999999631
Q ss_pred ---------------------------------------------------------------CCCCcchhhHHHHHHHH
Q 045127 384 ---------------------------------------------------------------QHRSTKYVYKFGLFLLE 400 (508)
Q Consensus 384 ---------------------------------------------------------------~~~~~~Dv~SlGvil~e 400 (508)
.++.++|||||||++||
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~e 240 (382)
T cd05625 161 QSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYE 240 (382)
T ss_pred ccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHHHH
Confidence 23557899999999999
Q ss_pred HHhCCCCCccc
Q 045127 401 MITNRRPLEEF 411 (508)
Q Consensus 401 lltg~~P~~~~ 411 (508)
|++|+.||...
T Consensus 241 lltG~~Pf~~~ 251 (382)
T cd05625 241 MLVGQPPFLAQ 251 (382)
T ss_pred HHhCCCCCCCC
Confidence 99999999753
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-33 Score=272.85 Aligned_cols=220 Identities=25% Similarity=0.368 Sum_probs=177.5
Q ss_pred cCCCCCceeeecCCeEEEEEEECCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEeec
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWT 317 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 317 (508)
++|+..+.||+|+||.||++.. +++.||+|.++... ....+.+|+.++++++|||++++++++... ..+++|||+
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~---~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~ 80 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV---TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELM 80 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc---hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECC
Confidence 4688899999999999999975 57889999986433 346788999999999999999999998654 479999999
Q ss_pred CCCCHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC------------
Q 045127 318 NGGNVELWLS---ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE------------ 382 (508)
Q Consensus 318 ~~gsL~~~l~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~------------ 382 (508)
++++|.+++. ...+++..+..++.|++.||+|||+. |++||||||+||+++.++.+||+|||.+
T Consensus 81 ~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~ 159 (254)
T cd05083 81 SKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESK-KLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDNSKL 159 (254)
T ss_pred CCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC-CeeccccCcceEEEcCCCcEEECCCccceeccccCCCCCC
Confidence 9999999997 23578999999999999999999999 9999999999999999999999999863
Q ss_pred ------------CCCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHHH
Q 045127 383 ------------YQHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQAE 449 (508)
Q Consensus 383 ------------~~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 449 (508)
..++.++||||||+++|||++ |+.||......+ .......... .... .....
T Consensus 160 ~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~--~~~~~~~~~~----------~~~~---~~~~~ 224 (254)
T cd05083 160 PVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKE--VKECVEKGYR----------MEPP---EGCPA 224 (254)
T ss_pred CceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHH--HHHHHhCCCC----------CCCC---CcCCH
Confidence 234567899999999999998 999987433211 1111111100 0000 11245
Q ss_pred HHHHHHHhcCCCCCCCCCCHHHHHHHHHH
Q 045127 450 QGLGLGLMCTDQPTGKLPSLVQIYNMITR 478 (508)
Q Consensus 450 ~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 478 (508)
.+.+++.+||+.+|++||+++++++.|++
T Consensus 225 ~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 225 DVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 67789999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-33 Score=272.50 Aligned_cols=213 Identities=22% Similarity=0.303 Sum_probs=169.3
Q ss_pred ceeeecCCeEEEEEEECC-C----------CEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEE
Q 045127 244 NLVGKNEGAAIYKGILRD-G----------TRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAI 312 (508)
Q Consensus 244 ~~lg~G~~g~V~~~~~~~-~----------~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 312 (508)
+.||+|+||.||+|...+ + ..+++|.+..... ....+.+|+.++++++||||+++++++.. ...++
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~l 77 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHR--DSLAFFETASLMSQLSHKHLVKLYGVCVR-DENIM 77 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchh--hHHHHHHHHHHHHcCCCcchhheeeEEec-CCcEE
Confidence 468999999999999854 3 2577887754322 26788999999999999999999999888 77899
Q ss_pred EEeecCCCCHHHHhcc-C-CCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCC-------ceEEeeccCCC
Q 045127 313 VTEWTNGGNVELWLSE-S-APSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNL-------EPLISRFKIEY 383 (508)
Q Consensus 313 v~e~~~~gsL~~~l~~-~-~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~-------~~kl~Dfg~~~ 383 (508)
||||+++|+|.+++.. . .+++..+..++.|++.||+|||++ +++||||||+||+++.++ .+|++|||.+.
T Consensus 78 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~-~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~ 156 (259)
T cd05037 78 VEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDK-KLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPI 156 (259)
T ss_pred EEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhC-CeecccCccceEEEecCccccCCceeEEeCCCCccc
Confidence 9999999999999972 3 689999999999999999999999 999999999999999887 79999998632
Q ss_pred -------------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhc
Q 045127 384 -------------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDER 437 (508)
Q Consensus 384 -------------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (508)
.++.++||||||+++|||++ |..||....... ...+... ...
T Consensus 157 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~--~~~~~~~----------~~~ 224 (259)
T cd05037 157 TVLSREERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSE--KERFYQD----------QHR 224 (259)
T ss_pred ccccccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchh--HHHHHhc----------CCC
Confidence 34567999999999999999 577776432111 1111110 000
Q ss_pred ccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHH
Q 045127 438 MMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMIT 477 (508)
Q Consensus 438 l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~ 477 (508)
.... ....+.+++.+||..+|++|||+.++++.|+
T Consensus 225 ~~~~-----~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 225 LPMP-----DCAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred CCCC-----CchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 0000 1256788999999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >KOG0589 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-34 Score=285.58 Aligned_cols=223 Identities=16% Similarity=0.175 Sum_probs=184.8
Q ss_pred hcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCC-CHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCe-eEEE
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDV-SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRT-RAIV 313 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~lv 313 (508)
.++|...+.+|+|+||.++.++++ ++..+++|.+.-.. ....++...+|+.++++++|||||.+.+.+..++. .+||
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Iv 82 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIV 82 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEE
Confidence 357888999999999999999874 57889999987433 33456688999999999999999999999988877 8999
Q ss_pred EeecCCCCHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC--------
Q 045127 314 TEWTNGGNVELWLS---ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE-------- 382 (508)
Q Consensus 314 ~e~~~~gsL~~~l~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~-------- 382 (508)
|+||+||++.+.+. +..++++.+.+|+.|++.|+.|||++ .|+|||||+.||+++.+..+||+|||++
T Consensus 83 m~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~-~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~ 161 (426)
T KOG0589|consen 83 MEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHEN-RVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPEDS 161 (426)
T ss_pred EeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhh-hhhcccchhhhhhccccCceeecchhhhhhcCCchh
Confidence 99999999999998 35689999999999999999999999 9999999999999999999999999885
Q ss_pred -------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcc
Q 045127 383 -------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTEN 443 (508)
Q Consensus 383 -------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 443 (508)
..|..|+|||||||++|||++-+++|.... +...+....+ ...+|.-
T Consensus 162 ~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~-----m~~Li~ki~~----~~~~Plp----- 227 (426)
T KOG0589|consen 162 LASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASN-----MSELILKINR----GLYSPLP----- 227 (426)
T ss_pred hhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccc-----hHHHHHHHhh----ccCCCCC-----
Confidence 356789999999999999999999997432 1112221111 1112211
Q ss_pred hHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 444 MFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 444 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
.....++..++..|++.+|..||++.+++.+
T Consensus 228 -~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 228 -SMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred -ccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 2235567778899999999999999999987
|
|
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-33 Score=280.06 Aligned_cols=227 Identities=14% Similarity=0.121 Sum_probs=180.4
Q ss_pred cCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCC--HHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEE
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVS--REIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVT 314 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 314 (508)
++|+..+.||+|+||.||++... .++.|++|.+..... ......+.+|+++++.++||||+++++.+..++..++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 36888999999999999999974 578999999864432 234567889999999999999999999999999999999
Q ss_pred eecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC----------
Q 045127 315 EWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY---------- 383 (508)
Q Consensus 315 e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~---------- 383 (508)
||+++++|.+++. ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.+|++|||.+.
T Consensus 81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~ 159 (305)
T cd05609 81 EYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNY-GIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNL 159 (305)
T ss_pred ecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCchHHEEECCCCCEEEeeCCCccccCcCccccc
Confidence 9999999999997 56789999999999999999999999 99999999999999999999999998642
Q ss_pred --------------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhh
Q 045127 384 --------------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQ 431 (508)
Q Consensus 384 --------------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~ 431 (508)
.++.++||||||+++||+++|+.||...... +.........
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~-----~~~~~~~~~~-- 232 (305)
T cd05609 160 YEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPE-----ELFGQVISDD-- 232 (305)
T ss_pred cccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHHHhcc--
Confidence 2345799999999999999999999643211 1111110000
Q ss_pred hhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHH
Q 045127 432 LVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITR 478 (508)
Q Consensus 432 ~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 478 (508)
...+. ........+.+++.+||+.||++||++.++.+.|+.
T Consensus 233 -~~~~~-----~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~ 273 (305)
T cd05609 233 -IEWPE-----GDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQH 273 (305)
T ss_pred -cCCCC-----ccccCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence 00000 001124557789999999999999996655555554
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-33 Score=274.73 Aligned_cols=222 Identities=17% Similarity=0.262 Sum_probs=181.9
Q ss_pred CCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcC---CCCccceeeEEecCCeeEEEE
Q 045127 239 GFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQ---HKNLIRVLGWNNSRRTRAIVT 314 (508)
Q Consensus 239 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~~~~lv~ 314 (508)
.|+..+.||+|+||.||+|.+ .+++.||+|.+.........+++.+|+.++++++ |||++++++++..+...++||
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~ 81 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM 81 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence 477789999999999999997 5789999999875545555678889999999986 999999999999999999999
Q ss_pred eecCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-----------
Q 045127 315 EWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY----------- 383 (508)
Q Consensus 315 e~~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~----------- 383 (508)
||+++++|.+++....+++..+..++.|++.||.|||+. |++||||+|+||+++.++.++++|||.+.
T Consensus 82 e~~~~~~L~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~-~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~ 160 (277)
T cd06917 82 EYAEGGSVRTLMKAGPIAEKYISVIIREVLVALKYIHKV-GVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKRST 160 (277)
T ss_pred ecCCCCcHHHHHHccCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCcCHHHEEEcCCCCEEEccCCceeecCCCcccccc
Confidence 999999999999877899999999999999999999999 99999999999999999999999998531
Q ss_pred -----------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHH
Q 045127 384 -----------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFD 446 (508)
Q Consensus 384 -----------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 446 (508)
.++.++||||||+++|+|++|+.||...... ...... .. ...+.+... .
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~-----~~~~~~-~~----~~~~~~~~~----~ 226 (277)
T cd06917 161 FVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAF-----RAMMLI-PK----SKPPRLEDN----G 226 (277)
T ss_pred ccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChh-----hhhhcc-cc----CCCCCCCcc----c
Confidence 2356899999999999999999999743211 111100 00 001111110 1
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 447 QAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 447 ~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
....+.+++.+||+.||++||++.|+++.
T Consensus 227 ~~~~~~~~i~~~l~~~p~~R~~~~~il~~ 255 (277)
T cd06917 227 YSKLLREFVAACLDEEPKERLSAEELLKS 255 (277)
T ss_pred CCHHHHHHHHHHcCCCcccCcCHHHHhhC
Confidence 24567789999999999999999999874
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-33 Score=294.16 Aligned_cols=238 Identities=12% Similarity=0.122 Sum_probs=174.6
Q ss_pred hhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecC-------
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSR------- 307 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------- 307 (508)
..++|+..+.||+|+||.||+|.. .+++.||||++.... ....+|+.+++.++||||+++++++...
T Consensus 64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~-----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~ 138 (440)
T PTZ00036 64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP-----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEK 138 (440)
T ss_pred cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc-----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCC
Confidence 346799999999999999999997 468999999885432 2235799999999999999999886532
Q ss_pred -CeeEEEEeecCCCCHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCC-ceEEeecc
Q 045127 308 -RTRAIVTEWTNGGNVELWLS-----ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNL-EPLISRFK 380 (508)
Q Consensus 308 -~~~~lv~e~~~~gsL~~~l~-----~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~-~~kl~Dfg 380 (508)
...++||||+++ ++.+++. ...+++..+..++.||+.||+|||++ +|+||||||+|||++.++ .+||+|||
T Consensus 139 ~~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~-~IiHrDLKp~NILl~~~~~~vkL~DFG 216 (440)
T PTZ00036 139 NIFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSK-FICHRDLKPQNLLIDPNTHTLKLCDFG 216 (440)
T ss_pred ceEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CEecCCcCHHHEEEcCCCCceeeeccc
Confidence 245789999975 6776664 46789999999999999999999999 999999999999999654 79999998
Q ss_pred CCC---------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccc--hhh
Q 045127 381 IEY---------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPE--NLQ 431 (508)
Q Consensus 381 ~~~---------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~--~~~ 431 (508)
++. .++.++|||||||++|||++|.+||....... .+.......... ...
T Consensus 217 la~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~-~~~~i~~~~~~p~~~~~ 295 (440)
T PTZ00036 217 SAKNLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVD-QLVRIIQVLGTPTEDQL 295 (440)
T ss_pred cchhccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCCHHHH
Confidence 742 34567899999999999999999997543211 111111111000 000
Q ss_pred hhhhhcc-----cCC--cc-----hHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH--HHHHHh
Q 045127 432 LVVDERM-----MLT--EN-----MFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM--ITRAYK 481 (508)
Q Consensus 432 ~~~~~~l-----~~~--~~-----~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~--L~~i~~ 481 (508)
....+.. ... .. ......++.+++.+||+.||.+|||+.|+++. +..+..
T Consensus 296 ~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~~~ 359 (440)
T PTZ00036 296 KEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDLRD 359 (440)
T ss_pred HHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhhhc
Confidence 0001100 000 00 00123567889999999999999999999864 555543
|
|
| >cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=274.85 Aligned_cols=219 Identities=20% Similarity=0.385 Sum_probs=175.7
Q ss_pred ceeeecCCeEEEEEEECC-------CCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEee
Q 045127 244 NLVGKNEGAAIYKGILRD-------GTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEW 316 (508)
Q Consensus 244 ~~lg~G~~g~V~~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 316 (508)
+.||+|+||.||+|...+ +..+|+|.+...........+.+|+.+++.++||||+++++++...+..++||||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL 80 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence 368999999999998642 2579999986554444567899999999999999999999999988899999999
Q ss_pred cCCCCHHHHhcc--------CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCC-----ceEEeeccCCC
Q 045127 317 TNGGNVELWLSE--------SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNL-----EPLISRFKIEY 383 (508)
Q Consensus 317 ~~~gsL~~~l~~--------~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~-----~~kl~Dfg~~~ 383 (508)
+++++|.+++.. ..+++.++..++.|++.||+|||+. +++|+||||+||+++.++ .++++|||++.
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~-~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~ 159 (269)
T cd05044 81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM-HFIHRDLAARNCLVSEKGYDADRVVKIGDFGLAR 159 (269)
T ss_pred cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC-CcccCCCChheEEEecCCCCCCcceEECCccccc
Confidence 999999999862 3478899999999999999999999 999999999999999877 89999998642
Q ss_pred -----------------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhh
Q 045127 384 -----------------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLV 433 (508)
Q Consensus 384 -----------------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (508)
.++.++|||||||++|||++ |+.||...... .....+...
T Consensus 160 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~--~~~~~~~~~-------- 229 (269)
T cd05044 160 DIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQ--EVLQHVTAG-------- 229 (269)
T ss_pred ccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHH--HHHHHHhcC--------
Confidence 23567899999999999998 99998643211 111111100
Q ss_pred hhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHH
Q 045127 434 VDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITR 478 (508)
Q Consensus 434 ~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 478 (508)
..+... ......+.+++.+||+.+|++||+++++++.|++
T Consensus 230 --~~~~~~---~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 230 --GRLQKP---ENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN 269 (269)
T ss_pred --CccCCc---ccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 011111 1124567789999999999999999999998863
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male |
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-33 Score=282.00 Aligned_cols=214 Identities=16% Similarity=0.199 Sum_probs=170.3
Q ss_pred ceeeecCCeEEEEEEEC-CCCEEEEEEecCCCC--HHHHHHHHHHHHHHhhc-CCCCccceeeEEecCCeeEEEEeecCC
Q 045127 244 NLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVS--REIRDEFVEECKLLVQF-QHKNLIRVLGWNNSRRTRAIVTEWTNG 319 (508)
Q Consensus 244 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~ 319 (508)
+.||+|+||.||+|... +++.||+|+++.... ......+..|..++... +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999974 578999999965321 22345567788888764 899999999999999999999999999
Q ss_pred CCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC---------------
Q 045127 320 GNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY--------------- 383 (508)
Q Consensus 320 gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~--------------- 383 (508)
|+|.+++. ...+++.++..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++.
T Consensus 81 g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~-~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt 159 (316)
T cd05619 81 GDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSK-GIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCTFCGT 159 (316)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC-CeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCceeeecCC
Confidence 99999987 46789999999999999999999999 99999999999999999999999998632
Q ss_pred ------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHHHHH
Q 045127 384 ------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQAEQG 451 (508)
Q Consensus 384 ------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l 451 (508)
.++.++|||||||++|||++|+.||...... .+...+... .+.+. ......+
T Consensus 160 ~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~--~~~~~i~~~---------~~~~~-----~~~~~~~ 223 (316)
T cd05619 160 PDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEE--ELFQSIRMD---------NPCYP-----RWLTREA 223 (316)
T ss_pred ccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhC---------CCCCC-----ccCCHHH
Confidence 3456899999999999999999999743211 111111100 01110 0123456
Q ss_pred HHHHHhcCCCCCCCCCCHH-HHHH
Q 045127 452 LGLGLMCTDQPTGKLPSLV-QIYN 474 (508)
Q Consensus 452 ~~l~~~Cl~~dP~~RPs~~-evl~ 474 (508)
.+++.+||+.||++||++. ++.+
T Consensus 224 ~~li~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05619 224 KDILVKLFVREPERRLGVKGDIRQ 247 (316)
T ss_pred HHHHHHHhccCHhhcCCChHHHHc
Confidence 7888999999999999997 6654
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-33 Score=275.36 Aligned_cols=224 Identities=12% Similarity=0.160 Sum_probs=175.0
Q ss_pred cCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCHHHHHHHHHHHHH-HhhcCCCCccceeeEEecCCeeEEEEe
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSREIRDEFVEECKL-LVQFQHKNLIRVLGWNNSRRTRAIVTE 315 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~-l~~l~h~niv~~~~~~~~~~~~~lv~e 315 (508)
++|+..+.||+|+||.||+|... +|+.||+|.++.........++..|+.. ++..+||||+++++++..+...+++||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e 80 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME 80 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence 46888899999999999999974 6899999999765443344566667665 566789999999999999999999999
Q ss_pred ecCCCCHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-------
Q 045127 316 WTNGGNVELWLS-----ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------- 383 (508)
Q Consensus 316 ~~~~gsL~~~l~-----~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------- 383 (508)
|++ |+|.+++. ...+++..+..++.|++.||+|||++++++||||||+||+++.++.+||+|||.+.
T Consensus 81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~ 159 (283)
T cd06617 81 VMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSVA 159 (283)
T ss_pred hhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecccccccccccc
Confidence 996 68877765 34689999999999999999999986589999999999999999999999998642
Q ss_pred -----------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccC
Q 045127 384 -----------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMML 440 (508)
Q Consensus 384 -----------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 440 (508)
.++.++|+|||||++|||++|+.||.........+..... ...+.+..
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~---------~~~~~~~~ 230 (283)
T cd06617 160 KTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVE---------EPSPQLPA 230 (283)
T ss_pred cccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHh---------cCCCCCCc
Confidence 1246789999999999999999999643221111111110 00011100
Q ss_pred CcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 441 TENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 441 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
......+.+++.+||+.+|++||++.++++.
T Consensus 231 ----~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 261 (283)
T cd06617 231 ----EKFSPEFQDFVNKCLKKNYKERPNYPELLQH 261 (283)
T ss_pred ----cccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0123567789999999999999999999873
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-33 Score=285.48 Aligned_cols=237 Identities=13% Similarity=0.107 Sum_probs=177.5
Q ss_pred HhhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCC-CHHHHHHHHHHHHHHhhcCCCCccceeeEEecCC----
Q 045127 235 AATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDV-SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRR---- 308 (508)
Q Consensus 235 ~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~---- 308 (508)
...++|+..+.||+|+||.||+|.. .+|..||+|.+.... .......+.+|+.+++.++||||+++++++....
T Consensus 18 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 97 (359)
T cd07876 18 TVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEE 97 (359)
T ss_pred hhhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccc
Confidence 3457899999999999999999997 468999999996433 2334667889999999999999999999886443
Q ss_pred --eeEEEEeecCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC---
Q 045127 309 --TRAIVTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY--- 383 (508)
Q Consensus 309 --~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~--- 383 (508)
..++||||+++ +|.+.+. ..+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++.
T Consensus 98 ~~~~~lv~e~~~~-~l~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~-~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~ 174 (359)
T cd07876 98 FQDVYLVMELMDA-NLCQVIH-MELDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDCTLKILDFGLARTAC 174 (359)
T ss_pred cceeEEEEeCCCc-CHHHHHh-ccCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHEEECCCCCEEEecCCCccccc
Confidence 46999999975 5666654 4588899999999999999999999 99999999999999999999999998742
Q ss_pred -----------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhcc----------chh
Q 045127 384 -----------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYP----------ENL 430 (508)
Q Consensus 384 -----------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~----------~~~ 430 (508)
.++.++|||||||++|||++|+.||....... .+......... ...
T Consensus 175 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 253 (359)
T cd07876 175 TNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHID-QWNKVIEQLGTPSAEFMNRLQPTV 253 (359)
T ss_pred cCccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcCCCcHHHHHHHHHHH
Confidence 34567999999999999999999997542111 11111110000 000
Q ss_pred hhhhhhc--ccC---------------CcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 431 QLVVDER--MML---------------TENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 431 ~~~~~~~--l~~---------------~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
....... ... ..........+.+++.+|++.||++|||+.|+++.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 315 (359)
T cd07876 254 RNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRH 315 (359)
T ss_pred HHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcC
Confidence 0000000 000 00000123467889999999999999999999985
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-33 Score=276.98 Aligned_cols=233 Identities=14% Similarity=0.180 Sum_probs=176.1
Q ss_pred CCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCC-HHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEee
Q 045127 239 GFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVS-REIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEW 316 (508)
Q Consensus 239 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 316 (508)
+|+..+.||+|++|.||+|... +++.||+|.++.... ......+.+|+.++++++||||+++++++..+...++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 4778899999999999999974 689999999864322 22346788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC---------
Q 045127 317 TNGGNVELWLS----ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY--------- 383 (508)
Q Consensus 317 ~~~gsL~~~l~----~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~--------- 383 (508)
++ ++|.+++. ...+++..+..++.|+++||+|||+. +++||||||+||+++.++.+||+|||.+.
T Consensus 81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~-~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~ 158 (285)
T cd07861 81 LS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSR-RVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRVY 158 (285)
T ss_pred CC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhC-CeeecCCCHHHEEEcCCCcEEECcccceeecCCCcccc
Confidence 97 58888876 25689999999999999999999999 99999999999999999999999998531
Q ss_pred -------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhcc--c----------hhhh
Q 045127 384 -------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYP--E----------NLQL 432 (508)
Q Consensus 384 -------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~--~----------~~~~ 432 (508)
.++.++|||||||++|||+||+.||....... ........... + ....
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (285)
T cd07861 159 THEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEID-QLFRIFRILGTPTEDVWPGVTSLPDYKN 237 (285)
T ss_pred cCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHHHHhCCCChhhhhcchhhHHHHh
Confidence 13557899999999999999999997432111 01111000000 0 0000
Q ss_pred hhhhcccCC--cchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 433 VVDERMMLT--ENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 433 ~~~~~l~~~--~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
.++...... ........++.+++.+||+.||++|||+.+|++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 238 TFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred hccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 000000000 000012346678999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=275.77 Aligned_cols=231 Identities=17% Similarity=0.210 Sum_probs=184.1
Q ss_pred CCCHHHHHHhhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhc-CCCCccceeeEE
Q 045127 227 KFTTWMLKAATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQF-QHKNLIRVLGWN 304 (508)
Q Consensus 227 ~~~~~~l~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~ 304 (508)
..++.++....+.|+..+.||+|+||.||+|.. .+++.+|+|.+... ......+..|+.+++++ +||||+++++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~--~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~ 82 (282)
T cd06636 5 DIDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVT--EDEEEEIKLEINMLKKYSHHRNIATYYGAF 82 (282)
T ss_pred hhhhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecC--hHHHHHHHHHHHHHHHhcCCCcEEEEeeeh
Confidence 356777778889999999999999999999997 56899999998543 22456788999999998 699999999988
Q ss_pred ec------CCeeEEEEeecCCCCHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceE
Q 045127 305 NS------RRTRAIVTEWTNGGNVELWLS---ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPL 375 (508)
Q Consensus 305 ~~------~~~~~lv~e~~~~gsL~~~l~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~k 375 (508)
.. ....+++|||+++|+|.+++. ...+++..+..++.|++.|++|||+. +++|+||||+||++++++.++
T Consensus 83 ~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~-~ivH~dl~~~nili~~~~~~~ 161 (282)
T cd06636 83 IKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAH-KVIHRDIKGQNVLLTENAEVK 161 (282)
T ss_pred hcccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEECCCCCEE
Confidence 53 457799999999999999987 34578888999999999999999999 999999999999999999999
Q ss_pred EeeccCCC--------------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHH
Q 045127 376 ISRFKIEY--------------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIR 423 (508)
Q Consensus 376 l~Dfg~~~--------------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~ 423 (508)
|+|||.+. .++.++|||||||++|||++|+.||......... ..
T Consensus 162 l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~----~~ 237 (282)
T cd06636 162 LVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRAL----FL 237 (282)
T ss_pred EeeCcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhh----hh
Confidence 99998631 2344789999999999999999999643211100 00
Q ss_pred HhccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 424 MHYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 424 ~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
......+.+. .......+.+++.+||+.||.+|||+.|+++
T Consensus 238 ------~~~~~~~~~~----~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 238 ------IPRNPPPKLK----SKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred ------HhhCCCCCCc----ccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 0000001110 0122456888999999999999999999975
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-33 Score=277.63 Aligned_cols=236 Identities=17% Similarity=0.238 Sum_probs=178.5
Q ss_pred hcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEe
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTE 315 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 315 (508)
.++|+..+.||+|++|.||+|... +++.||+|.+...........+.+|++++++++||||+++++++.+.+..++|||
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFE 83 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEe
Confidence 367889999999999999999975 6899999998654333233456789999999999999999999999999999999
Q ss_pred ecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC----------
Q 045127 316 WTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY---------- 383 (508)
Q Consensus 316 ~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~---------- 383 (508)
|+++ +|.+++. ...+++..+..++.|+++||.|||+. +++||||||+||+++.++.+||+|||.+.
T Consensus 84 ~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~-~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 161 (291)
T cd07844 84 YLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQR-RVLHRDLKPQNLLISERGELKLADFGLARAKSVPSKTYS 161 (291)
T ss_pred cCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeecccCCHHHEEEcCCCCEEECccccccccCCCCcccc
Confidence 9975 8999886 35689999999999999999999999 99999999999999999999999998531
Q ss_pred ------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhcc--ch-hhhhhh------h
Q 045127 384 ------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYP--EN-LQLVVD------E 436 (508)
Q Consensus 384 ------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~------~ 436 (508)
.++.++||||+|+++|||++|+.||.........+......... +. .....+ .
T Consensus 162 ~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (291)
T cd07844 162 NEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPY 241 (291)
T ss_pred ccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccccccc
Confidence 23457899999999999999999996543111111111110000 00 000000 0
Q ss_pred cccCC--c------chHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 437 RMMLT--E------NMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 437 ~l~~~--~------~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
..... . ........+.+++.+|++.+|++|||+.|+++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 242 SFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred cccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence 00000 0 00001256678999999999999999999875
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-33 Score=283.42 Aligned_cols=238 Identities=12% Similarity=0.118 Sum_probs=179.7
Q ss_pred HHhhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCH-HHHHHHHHHHHHHhhcCCCCccceeeEEecC----
Q 045127 234 KAATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSR-EIRDEFVEECKLLVQFQHKNLIRVLGWNNSR---- 307 (508)
Q Consensus 234 ~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~---- 307 (508)
....++|+..+.||+|+||.||+|.. .+++.||||.+...... .....+.+|+.++++++||||+++++++...
T Consensus 11 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 90 (343)
T cd07878 11 WEVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIE 90 (343)
T ss_pred hhhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccc
Confidence 34567899999999999999999996 56889999998643322 2356678999999999999999999887532
Q ss_pred --CeeEEEEeecCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC--
Q 045127 308 --RTRAIVTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY-- 383 (508)
Q Consensus 308 --~~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~-- 383 (508)
...+++||++ +++|.+++....+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++.
T Consensus 91 ~~~~~~~~~~~~-~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~ 168 (343)
T cd07878 91 NFNEVYLVTNLM-GADLNNIVKCQKLSDEHVQFLIYQLLRGLKYIHSA-GIIHRDLKPSNVAVNEDCELRILDFGLARQA 168 (343)
T ss_pred ccCcEEEEeecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CeecccCChhhEEECCCCCEEEcCCccceec
Confidence 3468999988 78999998878899999999999999999999999 99999999999999999999999998642
Q ss_pred -----------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhc--cchh--------
Q 045127 384 -----------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHY--PENL-------- 430 (508)
Q Consensus 384 -----------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~--~~~~-------- 430 (508)
.++.++|||||||++|||++|+.||...... ..+........ ....
T Consensus 169 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (343)
T cd07878 169 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYI-DQLKRIMEVVGTPSPEVLKKISSEH 247 (343)
T ss_pred CCCcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHH-HHHHHHHHHhCCCCHHHHHhcchhh
Confidence 2456799999999999999999999643211 11111111000 0000
Q ss_pred -hhhhhhcccCCcc-h-----HHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 431 -QLVVDERMMLTEN-M-----FDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 431 -~~~~~~~l~~~~~-~-----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
..... .+..... . ......+.+++.+|++.||++|||+.|+++.
T Consensus 248 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h 298 (343)
T cd07878 248 ARKYIQ-SLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH 298 (343)
T ss_pred HHHHhh-ccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00000 0000000 0 0012346789999999999999999999975
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-33 Score=268.57 Aligned_cols=221 Identities=18% Similarity=0.262 Sum_probs=178.3
Q ss_pred CCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCC----CHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEE
Q 045127 239 GFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDV----SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIV 313 (508)
Q Consensus 239 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 313 (508)
+|+..+.||+|++|.||+|... +++.|++|.+.... ..+..+.+.+|++++++++|+||+++++++......+++
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 4777899999999999999975 78999999985432 233567899999999999999999999999999999999
Q ss_pred EeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC---------
Q 045127 314 TEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY--------- 383 (508)
Q Consensus 314 ~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~--------- 383 (508)
|||+++++|.+++. ...+++..+..++.|++.|++|||+. |++|+||+|+||+++.++.+||+|||.+.
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~~~~ 159 (258)
T cd06632 81 LELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDR-NTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSFAK 159 (258)
T ss_pred EEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEECCCCCEEEccCccceecccccccc
Confidence 99999999999997 44589999999999999999999999 99999999999999999999999997531
Q ss_pred -----------------C-CCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchH
Q 045127 384 -----------------Q-HRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMF 445 (508)
Q Consensus 384 -----------------~-~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 445 (508)
. ++.++|+||||+++|+|++|+.||....... ........ ... +.+. .
T Consensus 160 ~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~-~~~~~~~~---~~~-----~~~~-----~ 225 (258)
T cd06632 160 SFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVA-AVFKIGRS---KEL-----PPIP-----D 225 (258)
T ss_pred ccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHH-HHHHHHhc---ccC-----CCcC-----C
Confidence 1 4567999999999999999999997543110 00000000 000 0000 0
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 446 DQAEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 446 ~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
.....+.+++.+||+.+|++||++.+++.
T Consensus 226 ~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 226 HLSDEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred CcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 12345677889999999999999999975
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-33 Score=275.83 Aligned_cols=223 Identities=14% Similarity=0.136 Sum_probs=176.6
Q ss_pred CCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCC--HHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEee
Q 045127 240 FSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVS--REIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEW 316 (508)
Q Consensus 240 ~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 316 (508)
|+..+.||+|+||.||++.. .+++.||+|.+..... ......+.+|+.++++++|++++++++.+...+..++||||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence 67778999999999999997 4689999999864322 22345677899999999999999999999999999999999
Q ss_pred cCCCCHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC----------
Q 045127 317 TNGGNVELWLS---ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY---------- 383 (508)
Q Consensus 317 ~~~gsL~~~l~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~---------- 383 (508)
+++++|.+++. ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.++|+|||.+.
T Consensus 82 ~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~-~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 160 (285)
T cd05630 82 MNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQE-RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKG 160 (285)
T ss_pred cCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC-CEEeCCCCHHHEEECCCCCEEEeeccceeecCCCccccC
Confidence 99999999885 34689999999999999999999999 99999999999999999999999998642
Q ss_pred ----------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHH
Q 045127 384 ----------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQ 447 (508)
Q Consensus 384 ----------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 447 (508)
.++.++||||||+++|||++|+.||....... ... ...... .... .... ...
T Consensus 161 ~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~-~~~-~~~~~~-~~~~----~~~~-----~~~ 228 (285)
T cd05630 161 RVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI-KRE-EVERLV-KEVQ----EEYS-----EKF 228 (285)
T ss_pred CCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccc-hHH-HHHhhh-hhhh----hhcC-----ccC
Confidence 24567899999999999999999997532211 000 000000 0000 0010 011
Q ss_pred HHHHHHHHHhcCCCCCCCCCC-----HHHHHHH
Q 045127 448 AEQGLGLGLMCTDQPTGKLPS-----LVQIYNM 475 (508)
Q Consensus 448 ~~~l~~l~~~Cl~~dP~~RPs-----~~evl~~ 475 (508)
...+.+++.+||+.||++||| ++|++++
T Consensus 229 ~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h 261 (285)
T cd05630 229 SPDARSLCKMLLCKDPKERLGCQGGGAREVKEH 261 (285)
T ss_pred CHHHHHHHHHHhhcCHHHccCCCCCchHHHHcC
Confidence 345678889999999999999 8888873
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-34 Score=284.51 Aligned_cols=225 Identities=18% Similarity=0.333 Sum_probs=190.0
Q ss_pred CCCCceeeecCCeEEEEEEEC---CC--CEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEE
Q 045127 240 FSKKNLVGKNEGAAIYKGILR---DG--TRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVT 314 (508)
Q Consensus 240 ~~~~~~lg~G~~g~V~~~~~~---~~--~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 314 (508)
....++||.|-||.||+|.+. .| -.||||.-+.+...+..+.|..|..+|+.++||||++++|+|.+. ..+|||
T Consensus 391 Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~-P~Wivm 469 (974)
T KOG4257|consen 391 ITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQ-PMWIVM 469 (974)
T ss_pred ccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeecc-ceeEEE
Confidence 345588999999999999963 23 358899998888888899999999999999999999999999865 468999
Q ss_pred eecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC----------
Q 045127 315 EWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE---------- 382 (508)
Q Consensus 315 e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~---------- 382 (508)
|.++-|.|..|++ +..++......++.||+.||+|||+. +.|||||..+|||+....-+|++|||++
T Consensus 470 EL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSk-rfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yYk 548 (974)
T KOG4257|consen 470 ELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESK-RFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYYK 548 (974)
T ss_pred ecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhh-chhhhhhhhhheeecCcceeeecccchhhhccccchhh
Confidence 9999999999998 67789999999999999999999999 9999999999999999999999999985
Q ss_pred ------------------CCCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcc
Q 045127 383 ------------------YQHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTEN 443 (508)
Q Consensus 383 ------------------~~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 443 (508)
++++.++|||-|||++||++. |..||....+.+.... ++. -.++..+
T Consensus 549 aS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~--iEn----------GeRlP~P-- 614 (974)
T KOG4257|consen 549 ASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGH--IEN----------GERLPCP-- 614 (974)
T ss_pred ccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEE--ecC----------CCCCCCC--
Confidence 356788999999999999987 9999987654432100 000 0112222
Q ss_pred hHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHh
Q 045127 444 MFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYK 481 (508)
Q Consensus 444 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~ 481 (508)
..++..+..++.+||++||.+||.+.|+...|+++..
T Consensus 615 -~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 615 -PNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred -CCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence 2346677889999999999999999999999998877
|
|
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-33 Score=273.28 Aligned_cols=224 Identities=18% Similarity=0.248 Sum_probs=179.7
Q ss_pred HhhcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhc-CCCCccceeeEEecCC----
Q 045127 235 AATNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSREIRDEFVEECKLLVQF-QHKNLIRVLGWNNSRR---- 308 (508)
Q Consensus 235 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~---- 308 (508)
..+++|+..+.||+|++|.||+|... +++.+++|++..... ..+.+.+|+.+++++ +|+||+++++++....
T Consensus 3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 80 (275)
T cd06608 3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED--EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGN 80 (275)
T ss_pred CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch--hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCc
Confidence 46789999999999999999999984 578999999864432 356789999999999 6999999999987544
Q ss_pred --eeEEEEeecCCCCHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccC
Q 045127 309 --TRAIVTEWTNGGNVELWLS-----ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKI 381 (508)
Q Consensus 309 --~~~lv~e~~~~gsL~~~l~-----~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~ 381 (508)
..++||||+++++|.+++. ...+++..+..++.|++.||.|||+. +++||||+|+||++++++.++++|||.
T Consensus 81 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~-~i~H~~l~p~ni~~~~~~~~~l~d~~~ 159 (275)
T cd06608 81 DDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHEN-KVIHRDIKGQNILLTKNAEVKLVDFGV 159 (275)
T ss_pred ceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcC-CcccCCCCHHHEEEccCCeEEECCCcc
Confidence 4799999999999999886 35789999999999999999999999 999999999999999999999999985
Q ss_pred CC--------------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccch
Q 045127 382 EY--------------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPEN 429 (508)
Q Consensus 382 ~~--------------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 429 (508)
+. .++.++|||||||++|+|++|+.||....... .+.+... .
T Consensus 160 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~-~---- 233 (275)
T cd06608 160 SAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMR-ALFKIPR-N---- 233 (275)
T ss_pred ceecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHH-HHHHhhc-c----
Confidence 31 13457999999999999999999997432111 1111000 0
Q ss_pred hhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 430 LQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 430 ~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
..+.+. ........+.+++.+||..||++|||+.++++
T Consensus 234 ----~~~~~~---~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 234 ----PPPTLK---SPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred ----CCCCCC---chhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 001111 11123456778999999999999999999986
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-33 Score=276.33 Aligned_cols=234 Identities=15% Similarity=0.188 Sum_probs=180.4
Q ss_pred cCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCC-HHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEe
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVS-REIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTE 315 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 315 (508)
++|+..+.||+|++|.||+|... +++.||+|++..... ....+.+.+|+.++++++|||++++++++..+...++|||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence 46888899999999999999985 589999999864322 2234567899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-----------
Q 045127 316 WTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY----------- 383 (508)
Q Consensus 316 ~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~----------- 383 (508)
|+++++|..+.. ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+|||.+.
T Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~-~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~ 159 (286)
T cd07847 81 YCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKH-NCIHRDVKPENILITKQGQIKLCDFGFARILTGPGDDYTD 159 (286)
T ss_pred ccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC-CceecCCChhhEEEcCCCcEEECccccceecCCCcccccC
Confidence 999999988876 55789999999999999999999999 99999999999999999999999997632
Q ss_pred -----------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccc---hhhhhhh--------
Q 045127 384 -----------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPE---NLQLVVD-------- 435 (508)
Q Consensus 384 -----------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-------- 435 (508)
.++.++||||||+++|||++|+.||......+. ... ....... ...+..+
T Consensus 160 ~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (286)
T cd07847 160 YVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQ-LYL-IRKTLGDLIPRHQQIFSTNQFFKGL 237 (286)
T ss_pred cccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHH-HHH-HHHHhCCCChHHhhhcccccccccc
Confidence 235679999999999999999999975432211 111 1110000 0000000
Q ss_pred --hcccCCcc----hHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 436 --ERMMLTEN----MFDQAEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 436 --~~l~~~~~----~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
+....... .......+.+++.+||+.+|++|||+.|++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 238 SIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred cCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 00000000 0011456788999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-33 Score=269.21 Aligned_cols=221 Identities=17% Similarity=0.163 Sum_probs=180.3
Q ss_pred CCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCC-CCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEee
Q 045127 239 GFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGD-VSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEW 316 (508)
Q Consensus 239 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 316 (508)
+|+..+.||.|+||.||.++. .+++.+++|.+... ........+.+|++++++++|+||+++++++.+.+..+++|||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 478889999999999999986 56889999998643 2344567789999999999999999999999999999999999
Q ss_pred cCCCCHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC----------
Q 045127 317 TNGGNVELWLSE---SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY---------- 383 (508)
Q Consensus 317 ~~~gsL~~~l~~---~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~---------- 383 (508)
+++++|.+++.. ..+++.++..++.|++.||+|||+. +++||||+|+||++++++.+||+|||.+.
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~-~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~ 159 (256)
T cd08221 81 ANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKA-GILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMAE 159 (256)
T ss_pred cCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC-CccccCCChHhEEEeCCCCEEECcCcceEEccccccccc
Confidence 999999999973 4689999999999999999999999 99999999999999999999999998532
Q ss_pred -----------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHH
Q 045127 384 -----------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFD 446 (508)
Q Consensus 384 -----------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 446 (508)
..+.++||||||+++|||++|+.||..... .......... ..... ...
T Consensus 160 ~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~-----~~~~~~~~~~--------~~~~~--~~~ 224 (256)
T cd08221 160 TVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNP-----LNLVVKIVQG--------NYTPV--VSV 224 (256)
T ss_pred ccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCH-----HHHHHHHHcC--------CCCCC--ccc
Confidence 235678999999999999999999864221 1111111111 11000 012
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 447 QAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 447 ~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
....+.+++.+||+.+|++||++.|+++.
T Consensus 225 ~~~~~~~~i~~~l~~~p~~R~s~~~ll~~ 253 (256)
T cd08221 225 YSSELISLVHSLLQQDPEKRPTADEVLDQ 253 (256)
T ss_pred cCHHHHHHHHHHcccCcccCCCHHHHhhC
Confidence 24567789999999999999999999875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-33 Score=268.66 Aligned_cols=221 Identities=22% Similarity=0.414 Sum_probs=179.6
Q ss_pred CCCCceeeecCCeEEEEEEECC-----CCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEE
Q 045127 240 FSKKNLVGKNEGAAIYKGILRD-----GTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVT 314 (508)
Q Consensus 240 ~~~~~~lg~G~~g~V~~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 314 (508)
|+..+.||.|+||.||++...+ +..||+|.+.........+.+..|++.++.++|+||+++++++...+..+++|
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~ 80 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVM 80 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEE
Confidence 3567899999999999999743 38899999976655446788999999999999999999999999999999999
Q ss_pred eecCCCCHHHHhcc-CC--CCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC--------
Q 045127 315 EWTNGGNVELWLSE-SA--PSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY-------- 383 (508)
Q Consensus 315 e~~~~gsL~~~l~~-~~--l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~-------- 383 (508)
||+++++|.+++.. .. +++..+..++.|++.||+|||+. +++||||||+||+++.++.++++|||.+.
T Consensus 81 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~-~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~ 159 (258)
T smart00219 81 EYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESK-NFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYY 159 (258)
T ss_pred eccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcC-CeeecccccceEEEccCCeEEEcccCCceeccccccc
Confidence 99999999999973 22 89999999999999999999999 99999999999999999999999997741
Q ss_pred --------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCc
Q 045127 384 --------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTE 442 (508)
Q Consensus 384 --------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 442 (508)
.++.++||||+|+++++|++ |+.||..... ..+......... ....
T Consensus 160 ~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~--~~~~~~~~~~~~----------~~~~- 226 (258)
T smart00219 160 KKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSN--EEVLEYLKKGYR----------LPKP- 226 (258)
T ss_pred ccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHhcCCC----------CCCC-
Confidence 23557899999999999998 7888864211 111111111100 0000
Q ss_pred chHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHH
Q 045127 443 NMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMI 476 (508)
Q Consensus 443 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L 476 (508)
......+.+++.+|+..||++|||+.|+++.|
T Consensus 227 --~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 227 --ENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred --CcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 11245678899999999999999999998764
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-33 Score=275.81 Aligned_cols=223 Identities=13% Similarity=0.143 Sum_probs=175.6
Q ss_pred CCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCH--HHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEee
Q 045127 240 FSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSR--EIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEW 316 (508)
Q Consensus 240 ~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 316 (508)
|+..+.||+|+||+||+|.+ .+++.||+|.+...... .....+.+|++++++++|+||+++.+++..++..+++|||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 56678999999999999997 56899999998643221 2345678899999999999999999999999999999999
Q ss_pred cCCCCHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC----------
Q 045127 317 TNGGNVELWLS---ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY---------- 383 (508)
Q Consensus 317 ~~~gsL~~~l~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~---------- 383 (508)
+++++|.+++. ...+++..+..++.|++.||.|||+. +|+||||||+||++++++.++|+|||.+.
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~-~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~ 160 (285)
T cd05632 82 MNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRE-NTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGESIRG 160 (285)
T ss_pred ccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeecCCCHHHEEECCCCCEEEecCCcceecCCCCcccC
Confidence 99999998886 34689999999999999999999999 99999999999999999999999998642
Q ss_pred ----------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHH
Q 045127 384 ----------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQ 447 (508)
Q Consensus 384 ----------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 447 (508)
.++.++|||||||++|||++|+.||....... .... +....... . ... . ...
T Consensus 161 ~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~-~~~~-~~~~~~~~-~----~~~--~---~~~ 228 (285)
T cd05632 161 RVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKV-KREE-VDRRVLET-E----EVY--S---AKF 228 (285)
T ss_pred CCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHH-HHHH-HHHhhhcc-c----ccc--C---ccC
Confidence 23567899999999999999999997432111 0111 11100000 0 000 0 112
Q ss_pred HHHHHHHHHhcCCCCCCCCCC-----HHHHHHH
Q 045127 448 AEQGLGLGLMCTDQPTGKLPS-----LVQIYNM 475 (508)
Q Consensus 448 ~~~l~~l~~~Cl~~dP~~RPs-----~~evl~~ 475 (508)
...+.+++..|++.||++||+ +.++++.
T Consensus 229 ~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05632 229 SEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRH 261 (285)
T ss_pred CHHHHHHHHHHccCCHhHcCCCcccChHHHHcC
Confidence 345678889999999999999 6677664
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-33 Score=281.37 Aligned_cols=220 Identities=14% Similarity=0.179 Sum_probs=173.0
Q ss_pred ceeeecCCeEEEEEEE-CCCCEEEEEEecCCCC--HHHHHHHHHHHHHHhhc-CCCCccceeeEEecCCeeEEEEeecCC
Q 045127 244 NLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVS--REIRDEFVEECKLLVQF-QHKNLIRVLGWNNSRRTRAIVTEWTNG 319 (508)
Q Consensus 244 ~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~ 319 (508)
+.||+|+||.||+|.. .+++.||+|+++.... ....+.+.+|..++.++ +||+|+++++++......++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 4699999999999997 4678999999975432 23456688999999888 699999999999999999999999999
Q ss_pred CCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC---------------
Q 045127 320 GNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY--------------- 383 (508)
Q Consensus 320 gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~--------------- 383 (508)
|+|..++. ...+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++.
T Consensus 81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~-~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt 159 (327)
T cd05617 81 GDLMFHMQRQRKLPEEHARFYAAEICIALNFLHER-GIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTSTFCGT 159 (327)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHHEEEeCCCCEEEeccccceeccCCCCceecccCC
Confidence 99998887 56799999999999999999999999 99999999999999999999999998642
Q ss_pred ------------CCCCcchhhHHHHHHHHHHhCCCCCcccccC-cccHHHHHHHhccchhhhhhhhcccCCcchHHHHHH
Q 045127 384 ------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERG-EAGFIEYIRMHYPENLQLVVDERMMLTENMFDQAEQ 450 (508)
Q Consensus 384 ------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 450 (508)
.++.++|||||||++|||++|+.||+..... ......+..... ......... .....
T Consensus 160 ~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~-------~~~~~~~p~---~~~~~ 229 (327)
T cd05617 160 PNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVI-------LEKPIRIPR---FLSVK 229 (327)
T ss_pred cccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHH-------HhCCCCCCC---CCCHH
Confidence 2356899999999999999999999643321 111111111111 111111110 11345
Q ss_pred HHHHHHhcCCCCCCCCCCH------HHHHH
Q 045127 451 GLGLGLMCTDQPTGKLPSL------VQIYN 474 (508)
Q Consensus 451 l~~l~~~Cl~~dP~~RPs~------~evl~ 474 (508)
+.+++.+|++.||++||++ +++.+
T Consensus 230 ~~~li~~~L~~dP~~R~~~~~~~~~~~i~~ 259 (327)
T cd05617 230 ASHVLKGFLNKDPKERLGCQPQTGFSDIKS 259 (327)
T ss_pred HHHHHHHHhccCHHHcCCCCCCCCHHHHHc
Confidence 6788899999999999984 56654
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-33 Score=269.03 Aligned_cols=221 Identities=15% Similarity=0.154 Sum_probs=179.7
Q ss_pred CCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCC-CCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEee
Q 045127 239 GFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGD-VSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEW 316 (508)
Q Consensus 239 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 316 (508)
+|+..+.||+|+||.||++.. .+++.||+|.+... ......+.+.+|+.++++++||||+++++++...+..++||||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 478889999999999999986 46899999998643 2333556889999999999999999999999999999999999
Q ss_pred cCCCCHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC-----------
Q 045127 317 TNGGNVELWLSE---SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE----------- 382 (508)
Q Consensus 317 ~~~gsL~~~l~~---~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~----------- 382 (508)
+++++|.+++.. ..+++..+.+++.|++.|++|||+. +++|+||+|+||+++.++.++++|||.+
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~-~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~ 159 (256)
T cd08218 81 CEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDR-KILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVELAR 159 (256)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC-CEecCCCCHHHEEEcCCCCEEEeeccceeecCcchhhhh
Confidence 999999998862 3578999999999999999999999 9999999999999999999999999864
Q ss_pred ----------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHH
Q 045127 383 ----------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFD 446 (508)
Q Consensus 383 ----------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 446 (508)
...+.++|||||||++++|++|+.||.... ....+........ +.. ...
T Consensus 160 ~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~-----~~~~~~~~~~~~~-----~~~-----~~~ 224 (256)
T cd08218 160 TCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGN-----MKNLVLKIIRGSY-----PPV-----SSH 224 (256)
T ss_pred hccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCC-----HHHHHHHHhcCCC-----CCC-----ccc
Confidence 233567899999999999999999986422 1111111111100 000 012
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 447 QAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 447 ~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
....+.+++.+||+.+|++||++.||++.
T Consensus 225 ~~~~~~~li~~~l~~~p~~Rp~~~~vl~~ 253 (256)
T cd08218 225 YSYDLRNLVSQLFKRNPRDRPSVNSILEK 253 (256)
T ss_pred CCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 24567889999999999999999999873
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti |
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-33 Score=283.33 Aligned_cols=213 Identities=15% Similarity=0.142 Sum_probs=166.2
Q ss_pred ceeeecCCeEEEEEEEC-CCCEEEEEEecCCCC--HHHHHHHHHHHH-HHhhcCCCCccceeeEEecCCeeEEEEeecCC
Q 045127 244 NLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVS--REIRDEFVEECK-LLVQFQHKNLIRVLGWNNSRRTRAIVTEWTNG 319 (508)
Q Consensus 244 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 319 (508)
+.||+|+||.||+|+.. +++.||+|++..... ......+..|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 46999999999999974 578899999864321 122334444444 56788999999999999999999999999999
Q ss_pred CCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC---------------
Q 045127 320 GNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY--------------- 383 (508)
Q Consensus 320 gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~--------------- 383 (508)
|+|.+++. ...+++..+..++.||++||+|||++ ||+||||||+||+++.++.+||+|||++.
T Consensus 81 ~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~-giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt 159 (325)
T cd05602 81 GELFYHLQRERCFLEPRARFYAAEIASALGYLHSL-NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTSTFCGT 159 (325)
T ss_pred CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCcccccCC
Confidence 99999987 56688889999999999999999999 99999999999999999999999999642
Q ss_pred ------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHHHHH
Q 045127 384 ------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQAEQG 451 (508)
Q Consensus 384 ------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l 451 (508)
.++.++|||||||++|||++|+.||...... ...... ......... .....+
T Consensus 160 ~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-----~~~~~i--------~~~~~~~~~---~~~~~~ 223 (325)
T cd05602 160 PEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA-----EMYDNI--------LNKPLQLKP---NITNSA 223 (325)
T ss_pred ccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHH-----HHHHHH--------HhCCcCCCC---CCCHHH
Confidence 2456899999999999999999999743211 111111 111111111 123456
Q ss_pred HHHHHhcCCCCCCCCCCHHHHH
Q 045127 452 LGLGLMCTDQPTGKLPSLVQIY 473 (508)
Q Consensus 452 ~~l~~~Cl~~dP~~RPs~~evl 473 (508)
.+++.+|++.||.+||++.+.+
T Consensus 224 ~~li~~~l~~~p~~R~~~~~~~ 245 (325)
T cd05602 224 RHLLEGLLQKDRTKRLGAKDDF 245 (325)
T ss_pred HHHHHHHcccCHHHCCCCCCCH
Confidence 7788999999999999887433
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-34 Score=275.51 Aligned_cols=214 Identities=20% Similarity=0.309 Sum_probs=167.8
Q ss_pred ceeeecCCeEEEEEEECC--------CCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEe
Q 045127 244 NLVGKNEGAAIYKGILRD--------GTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTE 315 (508)
Q Consensus 244 ~~lg~G~~g~V~~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 315 (508)
+.||+|+||.||+|.... ...|++|.+... .....+.+.+|+.+++.++||||+++++++..+...++|||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e 79 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKS-HRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQE 79 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcch-hHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEe
Confidence 468999999999998632 234888887533 23345678899999999999999999999999889999999
Q ss_pred ecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCc--------eEEeeccCC---
Q 045127 316 WTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLE--------PLISRFKIE--- 382 (508)
Q Consensus 316 ~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~--------~kl~Dfg~~--- 382 (508)
|+++|+|.+++. +..+++..+..++.||+.||+|||++ ||+||||||+||+++.++. ++++|||.+
T Consensus 80 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~ 158 (258)
T cd05078 80 YVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDK-GLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITV 158 (258)
T ss_pred cCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCccceEEEecccccccCCCceEEeccccccccc
Confidence 999999999997 34589999999999999999999999 9999999999999987765 599999763
Q ss_pred ---------------------CCCCCcchhhHHHHHHHHHHhCC-CCCcccccCcccHHHHHHHhccchhhhhhhhcccC
Q 045127 383 ---------------------YQHRSTKYVYKFGLFLLEMITNR-RPLEEFERGEAGFIEYIRMHYPENLQLVVDERMML 440 (508)
Q Consensus 383 ---------------------~~~~~~~Dv~SlGvil~elltg~-~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 440 (508)
..++.++||||||+++|||++|. .|+....... ..... ......
T Consensus 159 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~--~~~~~------------~~~~~~ 224 (258)
T cd05078 159 LPKEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQK--KLQFY------------EDRHQL 224 (258)
T ss_pred CCchhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHH--HHHHH------------HccccC
Confidence 12466799999999999999985 5554321110 00000 001100
Q ss_pred CcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHH
Q 045127 441 TENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMI 476 (508)
Q Consensus 441 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L 476 (508)
.. .....+.+++.+||+.||++|||++++++.|
T Consensus 225 ~~---~~~~~~~~li~~~l~~~p~~Rps~~~il~~l 257 (258)
T cd05078 225 PA---PKWTELANLINQCMDYEPDFRPSFRAIIRDL 257 (258)
T ss_pred CC---CCcHHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 00 1124577899999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-33 Score=277.71 Aligned_cols=235 Identities=14% Similarity=0.189 Sum_probs=179.9
Q ss_pred cCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCH-HHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEe
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSR-EIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTE 315 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 315 (508)
++|+..+.||+|+||.||+|.+. +++.||+|.+...... ...+.+.+|+++++.++||||+++++++..+...++|||
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence 46888899999999999999985 5899999998543322 245678899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-----------
Q 045127 316 WTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY----------- 383 (508)
Q Consensus 316 ~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~----------- 383 (508)
|+++++|..+.. ...+++.++..++.|+++||+|||+. +++||||+|+||++++++.++++|||.+.
T Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~-~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~ 159 (286)
T cd07846 81 FVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSH-NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYTD 159 (286)
T ss_pred cCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCHHHEEECCCCcEEEEeeeeeeeccCCccccCc
Confidence 999999998876 44689999999999999999999999 99999999999999999999999998631
Q ss_pred -----------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHH--Hhccchhhhhhh---------
Q 045127 384 -----------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIR--MHYPENLQLVVD--------- 435 (508)
Q Consensus 384 -----------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~--~~~~~~~~~~~~--------- 435 (508)
.++.++||||||+++|||++|+.||....... ....... ....+......+
T Consensus 160 ~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (286)
T cd07846 160 YVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDID-QLYHIIKCLGNLIPRHQEIFQKNPLFAGMR 238 (286)
T ss_pred ccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHH-HHHHHHHHhCCCchhhHHHhccchHhhccc
Confidence 13467999999999999999999986432111 0000000 000111111110
Q ss_pred -hcccCCcc----hHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 436 -ERMMLTEN----MFDQAEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 436 -~~l~~~~~----~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
+....... .......+.+++.+||+.+|++||++.++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 239 LPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred cccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 00000000 0012456888999999999999999999876
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI |
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-33 Score=269.24 Aligned_cols=227 Identities=15% Similarity=0.237 Sum_probs=183.1
Q ss_pred cCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEee
Q 045127 238 NGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEW 316 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 316 (508)
++|+..+.||.|++|.||+|.. .++..+++|++.........+.+.+|++.++.++|+|++++++.+..++..+++|||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 80 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY 80 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence 4788999999999999999996 468899999997554444677899999999999999999999999999999999999
Q ss_pred cCCCCHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC----------
Q 045127 317 TNGGNVELWLSE----SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE---------- 382 (508)
Q Consensus 317 ~~~gsL~~~l~~----~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~---------- 382 (508)
+++++|.+++.. ..+++..+..++.|++.||+|||+. |++||||||+||++++++.++++|||.+
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~-~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~ 159 (267)
T cd06610 81 LSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSN-GQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRT 159 (267)
T ss_pred cCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHhEEEcCCCCEEEcccchHHHhccCcccc
Confidence 999999999972 4689999999999999999999999 9999999999999999999999999752
Q ss_pred ---------------------C-CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccC
Q 045127 383 ---------------------Y-QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMML 440 (508)
Q Consensus 383 ---------------------~-~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 440 (508)
. ..+.++||||||+++|||++|+.||....... .+...... ..+.+..
T Consensus 160 ~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~-~~~~~~~~---------~~~~~~~ 229 (267)
T cd06610 160 RKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMK-VLMLTLQN---------DPPSLET 229 (267)
T ss_pred ccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhh-hHHHHhcC---------CCCCcCC
Confidence 1 34567899999999999999999997543221 11111111 0011111
Q ss_pred CcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 441 TENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 441 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
..........+.+++.+||+.||++|||+.++++.
T Consensus 230 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~ 264 (267)
T cd06610 230 GADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKH 264 (267)
T ss_pred ccccccccHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 00001224567789999999999999999999863
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-33 Score=272.08 Aligned_cols=224 Identities=20% Similarity=0.356 Sum_probs=177.1
Q ss_pred CCCCceeeecCCeEEEEEEEC----CCCEEEEEEecCCC-CHHHHHHHHHHHHHHhhcCCCCccceeeEEecCC------
Q 045127 240 FSKKNLVGKNEGAAIYKGILR----DGTRVKIEIYKGDV-SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRR------ 308 (508)
Q Consensus 240 ~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------ 308 (508)
|...+.||+|+||.||+|.+. ++..||+|++.... .....+++.+|++++++++||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 566789999999999999863 36889999987543 3345677899999999999999999999886432
Q ss_pred eeEEEEeecCCCCHHHHhc-------cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccC
Q 045127 309 TRAIVTEWTNGGNVELWLS-------ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKI 381 (508)
Q Consensus 309 ~~~lv~e~~~~gsL~~~l~-------~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~ 381 (508)
..++++||+++|+|.+++. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+|++|||.
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~-~i~H~dikp~nili~~~~~~kl~dfg~ 159 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK-NFIHRDLAARNCMLNENMTVCVADFGL 159 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CEeecccchhhEEEcCCCCEEECcccc
Confidence 2478899999999998874 12478899999999999999999999 999999999999999999999999987
Q ss_pred CCC-----------------------------CCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhh
Q 045127 382 EYQ-----------------------------HRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQ 431 (508)
Q Consensus 382 ~~~-----------------------------~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~ 431 (508)
+.. ++.++||||||+++|||++ |+.||..... ..+..++....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~--~~~~~~~~~~~----- 232 (273)
T cd05074 160 SKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVEN--SEIYNYLIKGN----- 232 (273)
T ss_pred cccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCH--HHHHHHHHcCC-----
Confidence 431 2456899999999999999 8888864322 11111111110
Q ss_pred hhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHH
Q 045127 432 LVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRA 479 (508)
Q Consensus 432 ~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i 479 (508)
.+... ......+.+++.+||+.+|++|||+.|+++.|+++
T Consensus 233 -----~~~~~---~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 233 -----RLKQP---PDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred -----cCCCC---CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 00000 11245788899999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac |
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-33 Score=282.31 Aligned_cols=210 Identities=15% Similarity=0.168 Sum_probs=166.1
Q ss_pred ceeeecCCeEEEEEEE-CCCCEEEEEEecCCCC--HHHHHHHHHHHH-HHhhcCCCCccceeeEEecCCeeEEEEeecCC
Q 045127 244 NLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVS--REIRDEFVEECK-LLVQFQHKNLIRVLGWNNSRRTRAIVTEWTNG 319 (508)
Q Consensus 244 ~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 319 (508)
+.||+|+||.||+|+. .+++.||+|++..... ......+..|.. +++.++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 4699999999999997 4689999999864321 123344555654 57889999999999999999999999999999
Q ss_pred CCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC---------------
Q 045127 320 GNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY--------------- 383 (508)
Q Consensus 320 gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~--------------- 383 (508)
|+|...+. ...+++..+..++.||+.||+|||+. ||+||||||+||+++.++.+||+|||++.
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~-~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt 159 (321)
T cd05603 81 GELFFHLQRERCFLEPRARFYAAEVASAIGYLHSL-NIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTSTFCGT 159 (321)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCccccccCC
Confidence 99998887 56789999999999999999999999 99999999999999999999999998642
Q ss_pred ------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHHHHH
Q 045127 384 ------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQAEQG 451 (508)
Q Consensus 384 ------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l 451 (508)
.++.++|||||||++|||++|+.||.... ........ ......... .....+
T Consensus 160 ~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~-----~~~~~~~i--------~~~~~~~~~---~~~~~~ 223 (321)
T cd05603 160 PEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRD-----VSQMYDNI--------LHKPLQLPG---GKTVAA 223 (321)
T ss_pred cccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCC-----HHHHHHHH--------hcCCCCCCC---CCCHHH
Confidence 24568999999999999999999997432 11111111 111111111 123457
Q ss_pred HHHHHhcCCCCCCCCCCHH
Q 045127 452 LGLGLMCTDQPTGKLPSLV 470 (508)
Q Consensus 452 ~~l~~~Cl~~dP~~RPs~~ 470 (508)
.+++.+|++.||.+||++.
T Consensus 224 ~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 224 CDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred HHHHHHHccCCHhhcCCCC
Confidence 7889999999999999764
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-33 Score=270.63 Aligned_cols=220 Identities=17% Similarity=0.275 Sum_probs=177.1
Q ss_pred CCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCH--------HHHHHHHHHHHHHhhcCCCCccceeeEEecCCe
Q 045127 239 GFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSR--------EIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRT 309 (508)
Q Consensus 239 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 309 (508)
+|...+.||+|++|.||+|.. .+++.+|+|.+...... ...+.+.+|+.++++++||||+++++++.....
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 367789999999999999987 45889999988643211 124578899999999999999999999999999
Q ss_pred eEEEEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-----
Q 045127 310 RAIVTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY----- 383 (508)
Q Consensus 310 ~~lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~----- 383 (508)
.+++|||+++++|.+++. ...+++..+..++.|++.||+|||+. |++||||+|+||++++++.++|+|||.+.
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~-~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNR-GIIHRDIKGANILVDNKGGIKISDFGISKKLEAN 159 (267)
T ss_pred cEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhc-CcccccCCHHHEEEcCCCCEEecccCCCcccccc
Confidence 999999999999999997 46789999999999999999999999 99999999999999999999999998531
Q ss_pred ----------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhh
Q 045127 384 ----------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVD 435 (508)
Q Consensus 384 ----------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (508)
.++.++|||||||++|+|++|+.||....... . +.. ......
T Consensus 160 ~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~----~-~~~-----~~~~~~ 229 (267)
T cd06628 160 SLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQ----A-IFK-----IGENAS 229 (267)
T ss_pred cccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHH----H-HHH-----HhccCC
Confidence 23457899999999999999999997532111 0 000 000011
Q ss_pred hcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 436 ERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 436 ~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
+.+. ......+.+++.+||+.||.+||++.|+++
T Consensus 230 ~~~~-----~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 230 PEIP-----SNISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred CcCC-----cccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 1111 112456778889999999999999999986
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-33 Score=280.42 Aligned_cols=214 Identities=14% Similarity=0.163 Sum_probs=171.0
Q ss_pred CCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCC--CHHHHHHHHHHHHHHhhcC-CCCccceeeEEecCCeeEEEE
Q 045127 239 GFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDV--SREIRDEFVEECKLLVQFQ-HKNLIRVLGWNNSRRTRAIVT 314 (508)
Q Consensus 239 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~ 314 (508)
+|+..+.||+|+||.||+|.. .+++.||+|++.... .....+.+..|..++..+. |++|+++++++...+..++||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 367789999999999999997 468999999996432 1223456788899988885 577888999999999999999
Q ss_pred eecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC----------
Q 045127 315 EWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY---------- 383 (508)
Q Consensus 315 e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~---------- 383 (508)
||+++|+|.+++. ...+++.++..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++.
T Consensus 81 Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~-~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~~~~ 159 (323)
T cd05615 81 EYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRR-GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVTTR 159 (323)
T ss_pred cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHHeEECCCCCEEEeccccccccCCCCcccc
Confidence 9999999999987 56789999999999999999999999 99999999999999999999999998632
Q ss_pred -----------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHH
Q 045127 384 -----------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFD 446 (508)
Q Consensus 384 -----------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 446 (508)
.++.++|||||||++|||++|+.||...... .....+ ........ ..
T Consensus 160 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~--~~~~~i-----------~~~~~~~p---~~ 223 (323)
T cd05615 160 TFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDED--ELFQSI-----------MEHNVSYP---KS 223 (323)
T ss_pred CccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHH--HHHHHH-----------HhCCCCCC---cc
Confidence 2356799999999999999999999753221 111111 11111000 01
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCH
Q 045127 447 QAEQGLGLGLMCTDQPTGKLPSL 469 (508)
Q Consensus 447 ~~~~l~~l~~~Cl~~dP~~RPs~ 469 (508)
....+.+++.+|++.+|.+|++.
T Consensus 224 ~~~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 224 LSKEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred CCHHHHHHHHHHcccCHhhCCCC
Confidence 23456788899999999999974
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-33 Score=283.34 Aligned_cols=211 Identities=16% Similarity=0.174 Sum_probs=166.9
Q ss_pred ceeeecCCeEEEEEEE-CCCCEEEEEEecCCC--CHHHHHHHHHHHH-HHhhcCCCCccceeeEEecCCeeEEEEeecCC
Q 045127 244 NLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDV--SREIRDEFVEECK-LLVQFQHKNLIRVLGWNNSRRTRAIVTEWTNG 319 (508)
Q Consensus 244 ~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 319 (508)
+.||+|+||.||+|.. .+|+.||+|++.... .......+..|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 4699999999999997 468999999996432 1223445556655 46778999999999999999999999999999
Q ss_pred CCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC---------------
Q 045127 320 GNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY--------------- 383 (508)
Q Consensus 320 gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~--------------- 383 (508)
|+|..++. ...+++..+..++.||+.||+|||+. ||+||||||+||+++.++.+||+|||++.
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~-givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt 159 (325)
T cd05604 81 GELFFHLQRERSFPEPRARFYAAEIASALGYLHSI-NIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTTFCGT 159 (325)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCcccccCC
Confidence 99998887 56789999999999999999999999 99999999999999999999999998642
Q ss_pred ------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHHHHH
Q 045127 384 ------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQAEQG 451 (508)
Q Consensus 384 ------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l 451 (508)
.++.++|||||||++|||++|+.||..... .+..... ....+.... .....+
T Consensus 160 ~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~-----~~~~~~~--------~~~~~~~~~---~~~~~~ 223 (325)
T cd05604 160 PEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDV-----AEMYDNI--------LHKPLVLRP---GASLTA 223 (325)
T ss_pred hhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCH-----HHHHHHH--------HcCCccCCC---CCCHHH
Confidence 245689999999999999999999974321 1111111 111111111 123456
Q ss_pred HHHHHhcCCCCCCCCCCHHH
Q 045127 452 LGLGLMCTDQPTGKLPSLVQ 471 (508)
Q Consensus 452 ~~l~~~Cl~~dP~~RPs~~e 471 (508)
.+++.+|++.+|.+||++.+
T Consensus 224 ~~ll~~ll~~~p~~R~~~~~ 243 (325)
T cd05604 224 WSILEELLEKDRQRRLGAKE 243 (325)
T ss_pred HHHHHHHhccCHHhcCCCCC
Confidence 67889999999999998853
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-33 Score=277.21 Aligned_cols=221 Identities=15% Similarity=0.207 Sum_probs=178.6
Q ss_pred CCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEeecC
Q 045127 240 FSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWTN 318 (508)
Q Consensus 240 ~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 318 (508)
|.....||+|+||.||++.. .++..||||.+.... ....+.+.+|+..++.++||||+++++.+..++..++||||++
T Consensus 24 ~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~ 102 (292)
T cd06658 24 LDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRK-QQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLE 102 (292)
T ss_pred HhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecch-HHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCC
Confidence 44457799999999999986 468899999985432 3356678999999999999999999999999999999999999
Q ss_pred CCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC---------------
Q 045127 319 GGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY--------------- 383 (508)
Q Consensus 319 ~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~--------------- 383 (508)
+++|.+++....+++.++..++.||+.||+|||++ +++||||||+||+++.++.++|+|||.+.
T Consensus 103 ~~~L~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~-~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~ 181 (292)
T cd06658 103 GGALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQ-GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKSLVGT 181 (292)
T ss_pred CCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CEeecCCCHHHEEEcCCCCEEEccCcchhhcccccccCceeecC
Confidence 99999999877899999999999999999999999 99999999999999999999999998642
Q ss_pred ------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHHHHH
Q 045127 384 ------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQAEQG 451 (508)
Q Consensus 384 ------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l 451 (508)
.++.++||||||+++|||++|+.||....... ....+. ....+.+.... .....+
T Consensus 182 ~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~--~~~~~~--------~~~~~~~~~~~---~~~~~~ 248 (292)
T cd06658 182 PYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQ--AMRRIR--------DNLPPRVKDSH---KVSSVL 248 (292)
T ss_pred ccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHH--------hcCCCcccccc---ccCHHH
Confidence 34678999999999999999999986432110 111111 11111111111 123356
Q ss_pred HHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 452 LGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 452 ~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
.+++.+||..||++|||++|+++.
T Consensus 249 ~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 249 RGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred HHHHHHHccCChhHCcCHHHHhhC
Confidence 678889999999999999999975
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-33 Score=274.30 Aligned_cols=243 Identities=16% Similarity=0.217 Sum_probs=185.2
Q ss_pred cCCCCCceeeecCCeEEEEEEECCCCEEEEEEecCCCCHHHHHHHHHHHHHHhh--cCCCCccceeeEEecCC----eeE
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQ--FQHKNLIRVLGWNNSRR----TRA 311 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~~~~~~~~~~----~~~ 311 (508)
...+..+++|+|.||.||+|.+. ++.||||++. .+..+.|..|-++.+. ++|+||++++++-.... .+.
T Consensus 210 ~pl~l~eli~~Grfg~V~KaqL~-~~~VAVKifp----~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eyw 284 (534)
T KOG3653|consen 210 DPLQLLELIGRGRFGCVWKAQLD-NRLVAVKIFP----EQEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYW 284 (534)
T ss_pred CchhhHHHhhcCccceeehhhcc-CceeEEEecC----HHHHHHHHhHHHHHhccCccchhHHHhhchhccCCcccccee
Confidence 44556688999999999999985 5999999994 3467889889888776 57999999999887655 789
Q ss_pred EEEeecCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCC--------CccccCCCCCCEEecCCCceEEeeccCCC
Q 045127 312 IVTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQW--------PEVDYDLRTGSVLLTDNLEPLISRFKIEY 383 (508)
Q Consensus 312 lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~--------~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~ 383 (508)
+|+||.+.|+|.+|++...++|....+|+..+++||+|||+.. +|+|||||.+|||+..|+++.|+|||++.
T Consensus 285 LVt~fh~kGsL~dyL~~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl 364 (534)
T KOG3653|consen 285 LVTEFHPKGSLCDYLKANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLAL 364 (534)
T ss_pred EEeeeccCCcHHHHHHhccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeE
Confidence 9999999999999999999999999999999999999999864 89999999999999999999999999863
Q ss_pred CCC-----------------------------------CcchhhHHHHHHHHHHhCCCCCcccc--cCcccHHHHHHHhc
Q 045127 384 QHR-----------------------------------STKYVYKFGLFLLEMITNRRPLEEFE--RGEAGFIEYIRMHY 426 (508)
Q Consensus 384 ~~~-----------------------------------~~~Dv~SlGvil~elltg~~P~~~~~--~~~~~~~~~~~~~~ 426 (508)
++. .+.||||+|.++|||+++-.-++... .-...+...+....
T Consensus 365 ~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hP 444 (534)
T KOG3653|consen 365 RLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHP 444 (534)
T ss_pred EecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCC
Confidence 321 24699999999999998654442111 00111111110000
Q ss_pred -cchhhh-----hhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhCCC
Q 045127 427 -PENLQL-----VVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSCPI 485 (508)
Q Consensus 427 -~~~~~~-----~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~ 485 (508)
.+.+.+ ...|.+.........+.-+.+.+..||+.||+.|-|+.-|.+++.++....+.
T Consensus 445 t~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~~~ 509 (534)
T KOG3653|consen 445 TLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLWED 509 (534)
T ss_pred CHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccCCc
Confidence 001111 12222222222224477788999999999999999999999999988765554
|
|
| >cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-33 Score=269.53 Aligned_cols=224 Identities=15% Similarity=0.201 Sum_probs=177.5
Q ss_pred CCCCCceeeecCCeEEEEEEECC--CCEEEEEEecCC---------CCHHHHHHHHHHHHHHhh-cCCCCccceeeEEec
Q 045127 239 GFSKKNLVGKNEGAAIYKGILRD--GTRVKIEIYKGD---------VSREIRDEFVEECKLLVQ-FQHKNLIRVLGWNNS 306 (508)
Q Consensus 239 ~~~~~~~lg~G~~g~V~~~~~~~--~~~vavK~~~~~---------~~~~~~~~~~~E~~~l~~-l~h~niv~~~~~~~~ 306 (508)
+|+..+.||+|+||.||+|.... ++.+|+|.+... .......++.+|+.++.+ ++||||+++++++..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 47888999999999999999854 688999987522 122345667889988875 799999999999999
Q ss_pred CCeeEEEEeecCCCCHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHhh-CCCccccCCCCCCEEecCCCceEEeecc
Q 045127 307 RRTRAIVTEWTNGGNVELWLS-----ESAPSWKHRLKVLIGVVEAMCYLQE-QWPEVDYDLRTGSVLLTDNLEPLISRFK 380 (508)
Q Consensus 307 ~~~~~lv~e~~~~gsL~~~l~-----~~~l~~~~~~~i~~~i~~~L~~LH~-~~~iiH~Dlkp~NIll~~~~~~kl~Dfg 380 (508)
.+..+++|||+++++|.+++. ...+++..+.+++.|++.||.|||+ . +++|+||||+||+++.++.+||+|||
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~-~i~H~dl~~~nil~~~~~~~~l~dfg 159 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEK-RIVHRDLTPNNIMLGEDDKVTITDFG 159 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCC-ceeecCCCHHHEEECCCCcEEEeccc
Confidence 999999999999999998874 4568999999999999999999996 6 89999999999999999999999998
Q ss_pred CCC--------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhh
Q 045127 381 IEY--------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVV 434 (508)
Q Consensus 381 ~~~--------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (508)
.+. .++.++||||||+++|||++|+.||..... ........
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~-----~~~~~~~~-------- 226 (269)
T cd08528 160 LAKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNM-----LSLATKIV-------- 226 (269)
T ss_pred ceeecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCH-----HHHHHHHh--------
Confidence 642 245679999999999999999999863211 11111110
Q ss_pred hhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHH
Q 045127 435 DERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMIT 477 (508)
Q Consensus 435 ~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~ 477 (508)
+....... .......+.+++.+||+.||++||++.|+.++++
T Consensus 227 ~~~~~~~~-~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 227 EAVYEPLP-EGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred hccCCcCC-cccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 01000000 0012356778899999999999999999999875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. |
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=266.63 Aligned_cols=225 Identities=16% Similarity=0.212 Sum_probs=184.9
Q ss_pred cCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEee
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEW 316 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 316 (508)
++|+..+.||+|++|.||+|... +++.|++|.+...........+.+|+..+.+++|+|++++++++......++||||
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY 80 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence 36888899999999999999975 58999999997655444578899999999999999999999999999999999999
Q ss_pred cCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhh-CCCccccCCCCCCEEecCCCceEEeeccCCC-----------
Q 045127 317 TNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQE-QWPEVDYDLRTGSVLLTDNLEPLISRFKIEY----------- 383 (508)
Q Consensus 317 ~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~-~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~----------- 383 (508)
+++++|.+++. ...+++..+..++.|+++|++|||+ . +++||||+|+||+++.++.++++|||.+.
T Consensus 81 ~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~-~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~ 159 (264)
T cd06623 81 MDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKR-HIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQCNT 159 (264)
T ss_pred cCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccC-CCccCCCCHHHEEECCCCCEEEccCccceecccCCCcccc
Confidence 99999999997 5778999999999999999999999 9 99999999999999999999999998632
Q ss_pred ----------------CCCCcchhhHHHHHHHHHHhCCCCCccccc-CcccHHHHHHHhccchhhhhhhhcccCCcchHH
Q 045127 384 ----------------QHRSTKYVYKFGLFLLEMITNRRPLEEFER-GEAGFIEYIRMHYPENLQLVVDERMMLTENMFD 446 (508)
Q Consensus 384 ----------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 446 (508)
.++.++||||||+++|+|++|+.||..... ........+.. . ..+.+.. ..
T Consensus 160 ~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~---~-----~~~~~~~----~~ 227 (264)
T cd06623 160 FVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICD---G-----PPPSLPA----EE 227 (264)
T ss_pred eeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhc---C-----CCCCCCc----cc
Confidence 234578999999999999999999975432 11111111110 0 0000100 00
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 447 QAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 447 ~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
....+.+++.+|++.+|++|||+.|+++.
T Consensus 228 ~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 228 FSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred CCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 34577889999999999999999999874
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-33 Score=267.89 Aligned_cols=223 Identities=18% Similarity=0.279 Sum_probs=179.8
Q ss_pred CCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCC-HHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEee
Q 045127 239 GFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVS-REIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEW 316 (508)
Q Consensus 239 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 316 (508)
+|+..+.||+|+||.||+|.. .+++.|++|.++.... ....+.+.+|+.++++++|+||+++++++...+..++|+||
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 478889999999999999997 4689999999875433 24678899999999999999999999999999999999999
Q ss_pred cCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC------------
Q 045127 317 TNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------------ 383 (508)
Q Consensus 317 ~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------------ 383 (508)
+++++|.+++. ...+++..+..++.|+++||.|||+. +++|+||+|+||++++++.+||+|||.+.
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~-~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~ 159 (264)
T cd06626 81 CSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSH-GIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEE 159 (264)
T ss_pred CCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEECCCCCEEEcccccccccCCCCCccccc
Confidence 99999999997 44588999999999999999999999 99999999999999999999999997531
Q ss_pred ----------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCC
Q 045127 384 ----------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLT 441 (508)
Q Consensus 384 ----------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 441 (508)
..+.++||||||+++||+++|+.||....... ........ ...+.+...
T Consensus 160 ~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~-~~~~~~~~--------~~~~~~~~~ 230 (264)
T cd06626 160 VQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEF-QIMFHVGA--------GHKPPIPDS 230 (264)
T ss_pred ccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchH-HHHHHHhc--------CCCCCCCcc
Confidence 14567899999999999999999997432111 01100000 001111110
Q ss_pred cchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 442 ENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 442 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
......+.+++.+||+.+|.+|||+.|++.
T Consensus 231 ---~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 231 ---LQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred ---cccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 111445668889999999999999999875
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-33 Score=270.79 Aligned_cols=226 Identities=17% Similarity=0.262 Sum_probs=177.8
Q ss_pred CCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCC---------HHHHHHHHHHHHHHhhcCCCCccceeeEEecCC
Q 045127 239 GFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVS---------REIRDEFVEECKLLVQFQHKNLIRVLGWNNSRR 308 (508)
Q Consensus 239 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~---------~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 308 (508)
+|...+.||+|++|.||+|.. .+++.||+|.++.... ....+.+..|+.++++++|||++++++++...+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 467789999999999999986 4689999998853211 112356788999999999999999999999999
Q ss_pred eeEEEEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC----
Q 045127 309 TRAIVTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY---- 383 (508)
Q Consensus 309 ~~~lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~---- 383 (508)
..++||||+++++|.+++. ...+++..+..++.|++.||.|||+. +++||||+|+||+++.++.++++|||.+.
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~ 160 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSK-GILHRDLKADNLLVDADGICKISDFGISKKSDD 160 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhC-CeeecCCChhhEEEcCCCeEEEeeccccccccc
Confidence 9999999999999999987 46789999999999999999999999 99999999999999999999999998531
Q ss_pred ---------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhh
Q 045127 384 ---------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDE 436 (508)
Q Consensus 384 ---------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (508)
.++.++||||||+++||+++|..||..... ...... .........+..
T Consensus 161 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~----~~~~~~-~~~~~~~~~~~~ 235 (272)
T cd06629 161 IYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEA----IAAMFK-LGNKRSAPPIPP 235 (272)
T ss_pred cccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcch----HHHHHH-hhccccCCcCCc
Confidence 145678999999999999999999863221 111111 110000001111
Q ss_pred cccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 437 RMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 437 ~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
.. .......+.+++.+||+.+|++|||+++|++.
T Consensus 236 ~~-----~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 236 DV-----SMNLSPVALDFLNACFTINPDNRPTARELLQH 269 (272)
T ss_pred cc-----cccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence 11 01124567788999999999999999999864
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-33 Score=281.69 Aligned_cols=237 Identities=13% Similarity=0.109 Sum_probs=178.0
Q ss_pred HhhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCC-CHHHHHHHHHHHHHHhhcCCCCccceeeEEecC-----
Q 045127 235 AATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDV-SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSR----- 307 (508)
Q Consensus 235 ~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~----- 307 (508)
...++|+..+.||+|+||.||+|.. ..++.||+|.+.... .......+.+|+.+++.++||||+++++++...
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 93 (355)
T cd07874 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE 93 (355)
T ss_pred hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence 4567899999999999999999986 468899999986543 233456788999999999999999999988643
Q ss_pred -CeeEEEEeecCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC---
Q 045127 308 -RTRAIVTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY--- 383 (508)
Q Consensus 308 -~~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~--- 383 (508)
...++||||+++ ++.+.+. ..+++..+..++.|+++||+|||++ ||+||||||+||+++.++.+||+|||++.
T Consensus 94 ~~~~~lv~e~~~~-~l~~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~-givHrDikp~Nill~~~~~~kl~Dfg~~~~~~ 170 (355)
T cd07874 94 FQDVYLVMELMDA-NLCQVIQ-MELDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 170 (355)
T ss_pred cceeEEEhhhhcc-cHHHHHh-hcCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCChHHEEECCCCCEEEeeCcccccCC
Confidence 346999999975 6766664 4588999999999999999999999 99999999999999999999999998742
Q ss_pred -----------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHh----------ccchh
Q 045127 384 -----------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMH----------YPENL 430 (508)
Q Consensus 384 -----------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~----------~~~~~ 430 (508)
.++.++|||||||++|||++|+.||....... .+...+... .....
T Consensus 171 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 249 (355)
T cd07874 171 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID-QWNKVIEQLGTPCPEFMKKLQPTV 249 (355)
T ss_pred CccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCHHHHHhhcHHH
Confidence 24568999999999999999999997432111 111111100 00001
Q ss_pred hhhhhhc---------------c-c-CCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 431 QLVVDER---------------M-M-LTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 431 ~~~~~~~---------------l-~-~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
...++.. . . ...........+.+++.+|++.||++|||+.|+++.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 250 RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred HHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 1111000 0 0 000001123567889999999999999999999985
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=259.32 Aligned_cols=175 Identities=17% Similarity=0.208 Sum_probs=157.7
Q ss_pred hcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCC--HHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEE
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVS--REIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIV 313 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 313 (508)
.++|+..+.||.|+||.|..++. .+|..+|+|++....- ....+...+|..+|+.+.||+++++++.+.+.+..|+|
T Consensus 43 l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymv 122 (355)
T KOG0616|consen 43 LQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMV 122 (355)
T ss_pred hhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEE
Confidence 35677889999999999999997 4689999999964322 23456778999999999999999999999999999999
Q ss_pred EeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC----------
Q 045127 314 TEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE---------- 382 (508)
Q Consensus 314 ~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~---------- 382 (508)
|||.+||.|..+++ .+++++..+.-+|.||+.||+|||+. +|++||+||+|||+|.+|.+||+|||++
T Consensus 123 meyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~-~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~rT~Tl 201 (355)
T KOG0616|consen 123 MEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSL-DIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGRTWTL 201 (355)
T ss_pred EeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhc-CeeeccCChHHeeeccCCcEEEEeccceEEecCcEEEe
Confidence 99999999999998 67899999999999999999999999 9999999999999999999999999985
Q ss_pred --------------CCCCCcchhhHHHHHHHHHHhCCCCCcccc
Q 045127 383 --------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFE 412 (508)
Q Consensus 383 --------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~ 412 (508)
+.+..++|.|||||++|||+.|.+||....
T Consensus 202 CGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~ 245 (355)
T KOG0616|consen 202 CGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDN 245 (355)
T ss_pred cCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCC
Confidence 345678999999999999999999997543
|
|
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-33 Score=274.32 Aligned_cols=223 Identities=17% Similarity=0.211 Sum_probs=178.6
Q ss_pred hcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCC--CCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEE
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGD--VSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIV 313 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 313 (508)
.+.|+..+.||+|+||.||+|... +++.||+|.+... ......+.+.+|+++++.++||||+++.+++......++|
T Consensus 14 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv 93 (307)
T cd06607 14 EKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLV 93 (307)
T ss_pred chhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEE
Confidence 356888999999999999999974 6899999998533 2233456789999999999999999999999999999999
Q ss_pred EeecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC---------
Q 045127 314 TEWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE--------- 382 (508)
Q Consensus 314 ~e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~--------- 382 (508)
|||++ |++.+++. ...+++..+..++.|++.||.|||+. +++||||+|+||++++++.++|+|||.+
T Consensus 94 ~e~~~-g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~-~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~~~~ 171 (307)
T cd06607 94 MEYCL-GSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSH-ERIHRDIKAGNILLTEPGTVKLADFGSASLVSPANSF 171 (307)
T ss_pred HHhhC-CCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHC-CceecCCCcccEEECCCCCEEEeecCcceecCCCCCc
Confidence 99997 57777665 56789999999999999999999999 9999999999999999999999999853
Q ss_pred -----------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchH
Q 045127 383 -----------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMF 445 (508)
Q Consensus 383 -----------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 445 (508)
..++.++||||||+++|||++|+.||....... ......... .+.+. ..
T Consensus 172 ~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~-----~~~~~~~~~-----~~~~~----~~ 237 (307)
T cd06607 172 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-----ALYHIAQND-----SPTLS----SN 237 (307)
T ss_pred cCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHH-----HHHHHhcCC-----CCCCC----ch
Confidence 224568999999999999999999986432111 000000000 00000 11
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 446 DQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 446 ~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
.....+.+++.+||+.+|++||++.+|+..
T Consensus 238 ~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 267 (307)
T cd06607 238 DWSDYFRNFVDSCLQKIPQDRPSSEELLKH 267 (307)
T ss_pred hhCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 234567889999999999999999999874
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-33 Score=268.72 Aligned_cols=224 Identities=17% Similarity=0.242 Sum_probs=178.5
Q ss_pred CCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCC-----HHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEE
Q 045127 239 GFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVS-----REIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAI 312 (508)
Q Consensus 239 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 312 (508)
+|+..+.||+|++|.||+|.. .+++.||+|.+..... ....+.+.+|++++++++|+||+++++++...+..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 478889999999999999986 5789999999864321 1235778999999999999999999999999999999
Q ss_pred EEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCC-ceEEeeccCCC-------
Q 045127 313 VTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNL-EPLISRFKIEY------- 383 (508)
Q Consensus 313 v~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~-~~kl~Dfg~~~------- 383 (508)
||||+++++|.+++. ...+++..+..++.|++.||+|||++ |++|+||||+||+++.++ .++|+|||.+.
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~-~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~ 159 (268)
T cd06630 81 FVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHEN-QIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGT 159 (268)
T ss_pred EEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEcCCCCEEEEcccccccccccccc
Confidence 999999999999987 56789999999999999999999999 999999999999998775 69999998642
Q ss_pred ------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhccc
Q 045127 384 ------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMM 439 (508)
Q Consensus 384 ------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 439 (508)
.++.++||||+|+++|+|++|+.||....... ........... ...+
T Consensus 160 ~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~--~~~~~~~~~~~----~~~~--- 230 (268)
T cd06630 160 GAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSN--HLALIFKIASA----TTAP--- 230 (268)
T ss_pred cCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcc--hHHHHHHHhcc----CCCC---
Confidence 23467899999999999999999996432111 11111100000 0000
Q ss_pred CCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 440 LTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 440 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
.........+.+++.+|+..+|++|||+.|+++
T Consensus 231 --~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 231 --SIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred --CCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 011123456778999999999999999999985
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-33 Score=269.15 Aligned_cols=235 Identities=16% Similarity=0.265 Sum_probs=191.6
Q ss_pred cCCCCCceeeecCCeEEEEEEECCCCEEEEEEecCCCCHHHHHHHHHHHHHHhh--cCCCCccceeeEEecCC----eeE
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQ--FQHKNLIRVLGWNNSRR----TRA 311 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~~~~~~~~~~----~~~ 311 (508)
......+.||+|.||.||+|.|+ |+.||||++... +.+.+.+|.+++.. ++|+||+.+++.-..+. +.+
T Consensus 211 rqI~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~sr----dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLw 285 (513)
T KOG2052|consen 211 RQIVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFSSR----DERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLW 285 (513)
T ss_pred heeEEEEEecCccccceeecccc-CCceEEEEeccc----chhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEE
Confidence 45667799999999999999996 899999999532 45678888888876 49999999998866443 579
Q ss_pred EEEeecCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCC-------CccccCCCCCCEEecCCCceEEeeccCCCC
Q 045127 312 IVTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQW-------PEVDYDLRTGSVLLTDNLEPLISRFKIEYQ 384 (508)
Q Consensus 312 lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~-------~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~ 384 (508)
+|++|.+.|||.||+....++....++++..+|.||++||... .|.|||||+.|||+..++.+.|+|+|++-.
T Consensus 286 LvTdYHe~GSL~DyL~r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~ 365 (513)
T KOG2052|consen 286 LVTDYHEHGSLYDYLNRNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR 365 (513)
T ss_pred EeeecccCCcHHHHHhhccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEE
Confidence 9999999999999999999999999999999999999999754 799999999999999999999999998522
Q ss_pred CC-------------------------------------CcchhhHHHHHHHHHHhC----------CCCCcccccCccc
Q 045127 385 HR-------------------------------------STKYVYKFGLFLLEMITN----------RRPLEEFERGEAG 417 (508)
Q Consensus 385 ~~-------------------------------------~~~Dv~SlGvil~elltg----------~~P~~~~~~~~~~ 417 (508)
.+ ..+||||||.++||+.-+ +.||.+.-..+.+
T Consensus 366 h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs 445 (513)
T KOG2052|consen 366 HDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPS 445 (513)
T ss_pred ecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCC
Confidence 11 247999999999999762 5788777666666
Q ss_pred HHHHHHHhccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHh
Q 045127 418 FIEYIRMHYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYK 481 (508)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~ 481 (508)
+.++.+-..-++++ |.+.......+.+..+.+++..||..+|..|-|+-.|-+.|.++.+
T Consensus 446 ~eeMrkVVCv~~~R----P~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~ 505 (513)
T KOG2052|consen 446 FEEMRKVVCVQKLR----PNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN 505 (513)
T ss_pred HHHHhcceeecccC----CCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence 55544333323333 3333333334678899999999999999999999999999988864
|
|
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-33 Score=301.52 Aligned_cols=227 Identities=12% Similarity=0.163 Sum_probs=178.3
Q ss_pred HHHhhcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCC-CCHHHHHHHHHHHHHHhhcCCCCccceeeEEec--CC
Q 045127 233 LKAATNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGD-VSREIRDEFVEECKLLVQFQHKNLIRVLGWNNS--RR 308 (508)
Q Consensus 233 l~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~ 308 (508)
.....++|.+.+.||+|+||.||+|... ++..||+|.+... ........+..|+.++++++||||+++++++.. ..
T Consensus 8 ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~ 87 (1021)
T PTZ00266 8 GESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQ 87 (1021)
T ss_pred CccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCC
Confidence 3455678999999999999999999974 5788999998643 233456788999999999999999999998854 45
Q ss_pred eeEEEEeecCCCCHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHhhCC------CccccCCCCCCEEecC-------
Q 045127 309 TRAIVTEWTNGGNVELWLS-----ESAPSWKHRLKVLIGVVEAMCYLQEQW------PEVDYDLRTGSVLLTD------- 370 (508)
Q Consensus 309 ~~~lv~e~~~~gsL~~~l~-----~~~l~~~~~~~i~~~i~~~L~~LH~~~------~iiH~Dlkp~NIll~~------- 370 (508)
.+|+||||+++|+|.+++. ...+++..++.|+.||+.||+|||+.. +|+||||||+|||++.
T Consensus 88 ~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~ 167 (1021)
T PTZ00266 88 KLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGK 167 (1021)
T ss_pred EEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccc
Confidence 6899999999999999986 257999999999999999999999851 5999999999999964
Q ss_pred ----------CCceEEeeccCCC----------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccc
Q 045127 371 ----------NLEPLISRFKIEY----------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFE 412 (508)
Q Consensus 371 ----------~~~~kl~Dfg~~~----------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~ 412 (508)
...+||+|||++. .++.++|||||||++|||+||+.||....
T Consensus 168 i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~ 247 (1021)
T PTZ00266 168 ITAQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKAN 247 (1021)
T ss_pred ccccccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCC
Confidence 2358999998632 24568899999999999999999996432
Q ss_pred cCcccHHHHHHHhccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 413 RGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
. ....+..... .+.+.. ......+.+++..||+.+|.+||++.|++.
T Consensus 248 ~----~~qli~~lk~-------~p~lpi----~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 248 N----FSQLISELKR-------GPDLPI----KGKSKELNILIKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred c----HHHHHHHHhc-------CCCCCc----CCCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence 1 1111111100 011100 011356778999999999999999999984
|
|
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-33 Score=274.49 Aligned_cols=234 Identities=16% Similarity=0.144 Sum_probs=178.5
Q ss_pred CCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCH----HHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEE
Q 045127 239 GFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSR----EIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIV 313 (508)
Q Consensus 239 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 313 (508)
+|+..+.||+|++|.||+|... +++.||+|.+...... .....+..|++++++++|+||+++++++.+....++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 4777889999999999999974 6899999999654322 2345677899999999999999999999999999999
Q ss_pred EeecCCCCHHHHhccC--CCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC--------
Q 045127 314 TEWTNGGNVELWLSES--APSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY-------- 383 (508)
Q Consensus 314 ~e~~~~gsL~~~l~~~--~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~-------- 383 (508)
|||+ +|+|.+++... .+++..+..++.||++||+|||++ |++||||||+||+++.++.++|+|||.+.
T Consensus 81 ~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~ 158 (298)
T cd07841 81 FEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSN-WILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRK 158 (298)
T ss_pred Eccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeecCCChhhEEEcCCCCEEEccceeeeeccCCCcc
Confidence 9999 89999999843 589999999999999999999999 99999999999999999999999997531
Q ss_pred --------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccc---h------hhhhh
Q 045127 384 --------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPE---N------LQLVV 434 (508)
Q Consensus 384 --------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~---~------~~~~~ 434 (508)
.++.++|||||||++|||++|..||......+ .+.......... . .....
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (298)
T cd07841 159 MTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDID-QLGKIFEALGTPTEENWPGVTSLPDYV 237 (298)
T ss_pred ccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHH-HHHHHHHHcCCCchhhhhhcccccccc
Confidence 23467999999999999999987776432211 111111100000 0 00000
Q ss_pred hhcccCC----cchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 435 DERMMLT----ENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 435 ~~~l~~~----~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
....... .........+.+++.+||+.||++|||+.|+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 238 EFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred cccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 0000000 0001224677899999999999999999999983
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=265.84 Aligned_cols=221 Identities=20% Similarity=0.184 Sum_probs=176.7
Q ss_pred CCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCC-CHHHHHHHHHHHHHHhhcCCCCccceeeEEec-CCeeEEEEe
Q 045127 239 GFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDV-SREIRDEFVEECKLLVQFQHKNLIRVLGWNNS-RRTRAIVTE 315 (508)
Q Consensus 239 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~~~~lv~e 315 (508)
+|+..+.||+|++|.||++... +++.||+|.+.... .....+.+.+|++++++++|+|++++++.+.. ....+++||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 5788899999999999999974 57899999986432 33456678999999999999999999988764 446789999
Q ss_pred ecCCCCHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC---------
Q 045127 316 WTNGGNVELWLS---ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY--------- 383 (508)
Q Consensus 316 ~~~~gsL~~~l~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~--------- 383 (508)
|+++++|.+++. ...+++.++..++.|++.|++|||+. |++||||||+||+++.++.++|+|||.+.
T Consensus 81 ~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~-~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~ 159 (257)
T cd08223 81 FCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEK-HILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDMA 159 (257)
T ss_pred ccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCchhEEEecCCcEEEecccceEEecccCCcc
Confidence 999999999986 34589999999999999999999999 99999999999999999999999998531
Q ss_pred ------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchH
Q 045127 384 ------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMF 445 (508)
Q Consensus 384 ------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 445 (508)
.++.++||||||++++|+++|+.||+.... ............ +.. ..
T Consensus 160 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~-----~~~~~~~~~~~~-----~~~-----~~ 224 (257)
T cd08223 160 STLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDM-----NSLVYRIIEGKL-----PPM-----PK 224 (257)
T ss_pred ccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH-----HHHHHHHHhcCC-----CCC-----cc
Confidence 234678999999999999999999874321 111111110000 000 01
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 446 DQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 446 ~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
.....+.+++.+|++.||++|||+.++++.
T Consensus 225 ~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 225 DYSPELGELIATMLSKRPEKRPSVKSILRQ 254 (257)
T ss_pred ccCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 234567789999999999999999999864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-33 Score=279.16 Aligned_cols=172 Identities=17% Similarity=0.180 Sum_probs=152.5
Q ss_pred cCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCC--CCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEE
Q 045127 238 NGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGD--VSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVT 314 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 314 (508)
++|+..+.||+|+||.||+++. .+++.||+|++... ......+.+.+|..++..++|+||+++++++.++...++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 4688999999999999999997 46899999998632 12224566889999999999999999999999999999999
Q ss_pred eecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC---------
Q 045127 315 EWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY--------- 383 (508)
Q Consensus 315 e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~--------- 383 (508)
||+++|+|.+++. ...+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||.+.
T Consensus 81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 159 (331)
T cd05597 81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQL-GYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQ 159 (331)
T ss_pred ecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC-CeEECCCCHHHEEECCCCCEEEEECCceeecCCCCCcc
Confidence 9999999999997 45789999999999999999999999 99999999999999999999999998631
Q ss_pred ------------------------CCCCcchhhHHHHHHHHHHhCCCCCcc
Q 045127 384 ------------------------QHRSTKYVYKFGLFLLEMITNRRPLEE 410 (508)
Q Consensus 384 ------------------------~~~~~~Dv~SlGvil~elltg~~P~~~ 410 (508)
.++.++|||||||++|||++|+.||..
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~ 210 (331)
T cd05597 160 SNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYA 210 (331)
T ss_pred ccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCC
Confidence 134578999999999999999999974
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-33 Score=281.09 Aligned_cols=236 Identities=14% Similarity=0.105 Sum_probs=177.4
Q ss_pred hhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCC-CHHHHHHHHHHHHHHhhcCCCCccceeeEEecC------
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDV-SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSR------ 307 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------ 307 (508)
..++|+..+.||+|+||.||+|.. ..++.||||++.... .......+.+|+.+++.++||||+++++++...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 457899999999999999999997 468899999996433 233456788999999999999999999987543
Q ss_pred CeeEEEEeecCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC----
Q 045127 308 RTRAIVTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY---- 383 (508)
Q Consensus 308 ~~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~---- 383 (508)
...|+||||+++ +|.+.+. ..+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++.
T Consensus 102 ~~~~lv~e~~~~-~l~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~ 178 (364)
T cd07875 102 QDVYIVMELMDA-NLCQVIQ-MELDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 178 (364)
T ss_pred CeEEEEEeCCCC-CHHHHHH-hcCCHHHHHHHHHHHHHHHHHHhhC-CeecCCCCHHHEEECCCCcEEEEeCCCccccCC
Confidence 357999999965 6777764 4588899999999999999999999 99999999999999999999999998752
Q ss_pred ----------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHh----------ccchhh
Q 045127 384 ----------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMH----------YPENLQ 431 (508)
Q Consensus 384 ----------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~----------~~~~~~ 431 (508)
.++.++|||||||++|||++|+.||....... .+...+... ......
T Consensus 179 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (364)
T cd07875 179 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHID-QWNKVIEQLGTPCPEFMKKLQPTVR 257 (364)
T ss_pred CCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcCCCCHHHHHhhhHHHH
Confidence 23568999999999999999999997533111 111111100 000000
Q ss_pred hhhhhcc--cC---------------CcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 432 LVVDERM--ML---------------TENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 432 ~~~~~~l--~~---------------~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
..+.... .. ..........+.+++.+|++.||.+|||+.|+++.
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h 318 (364)
T cd07875 258 TYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318 (364)
T ss_pred HHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 0000000 00 00001123467889999999999999999999985
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-34 Score=285.32 Aligned_cols=220 Identities=17% Similarity=0.217 Sum_probs=184.0
Q ss_pred CCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCC--HHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEe
Q 045127 239 GFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVS--REIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTE 315 (508)
Q Consensus 239 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 315 (508)
-|...+.||.|+||.||-|+. .+.+.||||.+.-... .+.-.++..|+..|.+++|||++.+-|+|..+...++|||
T Consensus 27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVME 106 (948)
T KOG0577|consen 27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVME 106 (948)
T ss_pred HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHH
Confidence 366678899999999999996 6789999999864332 3345789999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC-----------
Q 045127 316 WTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE----------- 382 (508)
Q Consensus 316 ~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~----------- 382 (508)
||- |+..+.+. ++++.+.++..|+.+.+.||+|||+. +.||||||..|||+++.|.+|++|||.+
T Consensus 107 YCl-GSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~-~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PAnsFvG 184 (948)
T KOG0577|consen 107 YCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSH-NRIHRDIKAGNILLSEPGLVKLADFGSASIMAPANSFVG 184 (948)
T ss_pred HHh-ccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHh-hHHhhhccccceEecCCCeeeeccccchhhcCchhcccC
Confidence 995 58888887 88999999999999999999999999 9999999999999999999999999863
Q ss_pred ---------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHH
Q 045127 383 ---------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQ 447 (508)
Q Consensus 383 ---------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 447 (508)
+.|+-++||||+|+++.||.-+++|+..+..... ... +...-.|.+.. .+.
T Consensus 185 TPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSA-----LYH-----IAQNesPtLqs----~eW 250 (948)
T KOG0577|consen 185 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA-----LYH-----IAQNESPTLQS----NEW 250 (948)
T ss_pred CccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHH-----HHH-----HHhcCCCCCCC----chh
Confidence 5788899999999999999999999876542211 000 11112233332 244
Q ss_pred HHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 448 AEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 448 ~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
...+..++..|+++-|.+|||.+++++
T Consensus 251 S~~F~~Fvd~CLqKipqeRptse~ll~ 277 (948)
T KOG0577|consen 251 SDYFRNFVDSCLQKIPQERPTSEELLK 277 (948)
T ss_pred HHHHHHHHHHHHhhCcccCCcHHHHhh
Confidence 677888999999999999999988875
|
|
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-32 Score=267.80 Aligned_cols=221 Identities=19% Similarity=0.225 Sum_probs=172.5
Q ss_pred cCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCC----CHHHHHHHHHHHHHHhhcCCCCccceeeEEec--CCee
Q 045127 238 NGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDV----SREIRDEFVEECKLLVQFQHKNLIRVLGWNNS--RRTR 310 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~~ 310 (508)
.+|+..+.||+|+||.||+|.. .++..|++|.+.... .......+.+|+.++++++||||+++++++.. ....
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 3688999999999999999997 458999999885332 22345678899999999999999999998875 3567
Q ss_pred EEEEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC------
Q 045127 311 AIVTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------ 383 (508)
Q Consensus 311 ~lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------ 383 (508)
+++|||+++++|.+++. ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++.
T Consensus 82 ~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~-~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~ 160 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSN-MIVHRDIKGANILRDSAGNVKLGDFGASKRLQTIC 160 (266)
T ss_pred EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC-CeeeCCCCHHHEEECCCCCEEEccCCCcccccccc
Confidence 89999999999999987 45689999999999999999999999 99999999999999999999999998642
Q ss_pred ------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhccc
Q 045127 384 ------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMM 439 (508)
Q Consensus 384 ------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 439 (508)
.++.++|||||||++|||++|+.||....... .+...... ...+.+.
T Consensus 161 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~-----~~~~~~~~----~~~~~~~ 231 (266)
T cd06651 161 MSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMA-----AIFKIATQ----PTNPQLP 231 (266)
T ss_pred ccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHH-----HHHHHhcC----CCCCCCc
Confidence 12457899999999999999999997432111 01110000 0011110
Q ss_pred CCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 440 LTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 440 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
......+..++ +||..+|++||+++||++
T Consensus 232 -----~~~~~~~~~li-~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 232 -----SHISEHARDFL-GCIFVEARHRPSAEELLR 260 (266)
T ss_pred -----hhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence 11122333444 788899999999999975
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-34 Score=280.73 Aligned_cols=223 Identities=13% Similarity=0.179 Sum_probs=178.4
Q ss_pred cCCCCCceeeecCCeEEEEEEECCCCEEEEEEec-CCCCHHHHHHHHHHHHHHhhcC-CCCccceeeEEecCCeeEEEEe
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYK-GDVSREIRDEFVEECKLLVQFQ-HKNLIRVLGWNNSRRTRAIVTE 315 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~-~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e 315 (508)
..|++.++||+||.+.||++...+.+.+|+|++. .....+....|.+|+..|.+++ |.+|+++++|-..++..|||||
T Consensus 361 ~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE 440 (677)
T KOG0596|consen 361 REYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVME 440 (677)
T ss_pred chhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEee
Confidence 4689999999999999999998888888887765 3344456788999999999995 9999999999999999999999
Q ss_pred ecCCCCHHHHhccC--CCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC----------
Q 045127 316 WTNGGNVELWLSES--APSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY---------- 383 (508)
Q Consensus 316 ~~~~gsL~~~l~~~--~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~---------- 383 (508)
|-+ .+|..+++.. ..+...+..+..|++.|+.++|++ ||||.||||.|+|+- .|.+||+|||++.
T Consensus 441 ~Gd-~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~-gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~DTTsI~ 517 (677)
T KOG0596|consen 441 CGD-IDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQH-GIVHSDLKPANFLLV-KGRLKLIDFGIANAIQPDTTSIV 517 (677)
T ss_pred ccc-ccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHh-ceeecCCCcccEEEE-eeeEEeeeechhcccCcccccee
Confidence 774 5999999832 233237788999999999999999 999999999999997 6889999998741
Q ss_pred ------------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhh
Q 045127 384 ------------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLV 433 (508)
Q Consensus 384 ------------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (508)
..++++||||+|||||+|+.|+.||....+ .| .++..+
T Consensus 518 kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n------~~------aKl~aI 585 (677)
T KOG0596|consen 518 KDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIIN------QI------AKLHAI 585 (677)
T ss_pred eccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHH------HH------HHHHhh
Confidence 245789999999999999999999974311 11 224445
Q ss_pred hhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 434 VDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 434 ~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
.+|...-.........++++++..||+.||++|||+.|+++.
T Consensus 586 ~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqh 627 (677)
T KOG0596|consen 586 TDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQH 627 (677)
T ss_pred cCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcC
Confidence 555321111111123348899999999999999999999864
|
|
| >cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=283.22 Aligned_cols=243 Identities=16% Similarity=0.180 Sum_probs=184.2
Q ss_pred hhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecC-----Ce
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSR-----RT 309 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-----~~ 309 (508)
.+++|+..+.||+|+||.||+|.. .+|+.||+|.+...........+.+|+.++++++||||+++++++... ..
T Consensus 3 ~~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 82 (336)
T cd07849 3 VGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFND 82 (336)
T ss_pred cccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccce
Confidence 357899999999999999999986 568999999986443334566788999999999999999999987643 35
Q ss_pred eEEEEeecCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC------
Q 045127 310 RAIVTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------ 383 (508)
Q Consensus 310 ~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------ 383 (508)
.+++|||++ ++|.+.+....+++..+..++.|+++||+|||+. ||+||||||+||+++.++.+||+|||++.
T Consensus 83 ~~lv~e~~~-~~l~~~~~~~~l~~~~~~~i~~ql~~aL~~LH~~-~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~ 160 (336)
T cd07849 83 VYIVQELME-TDLYKLIKTQHLSNDHIQYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEH 160 (336)
T ss_pred EEEEehhcc-cCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHHHEEECCCCCEEECcccceeeccccc
Confidence 799999996 4898888888899999999999999999999999 99999999999999999999999998631
Q ss_pred -------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhcc----chhhhhh
Q 045127 384 -------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYP----ENLQLVV 434 (508)
Q Consensus 384 -------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 434 (508)
.++.++|||||||++|+|++|+.||...... .....+..... +....+.
T Consensus 161 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 238 (336)
T cd07849 161 DHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYL--HQLNLILGVLGTPSQEDLNCII 238 (336)
T ss_pred cccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHcCCCCHHHHHHhh
Confidence 2345789999999999999999999643211 11111111111 1111111
Q ss_pred hhcc-------c-CCcc-----hHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH--HHHHHhh
Q 045127 435 DERM-------M-LTEN-----MFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM--ITRAYKS 482 (508)
Q Consensus 435 ~~~l-------~-~~~~-----~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~--L~~i~~~ 482 (508)
+... . .... .......+.+++.+||+.||++|||+.|+++. +......
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~~~ 301 (336)
T cd07849 239 SLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYHDP 301 (336)
T ss_pred chhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccCCC
Confidence 1100 0 0000 00124567899999999999999999999987 5555443
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase |
| >cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-32 Score=266.22 Aligned_cols=221 Identities=14% Similarity=0.210 Sum_probs=178.0
Q ss_pred CCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCC-CCHHHHHHHHHHHHHHhhcCCCCccceeeEEec--CCeeEEEE
Q 045127 239 GFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGD-VSREIRDEFVEECKLLVQFQHKNLIRVLGWNNS--RRTRAIVT 314 (508)
Q Consensus 239 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~~~lv~ 314 (508)
+|+..+.||.|+||.||+|.. .+++.||+|.+... ......+.+..|++++++++||||+++++++.. +...+++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 477889999999999999986 56889999998643 334456778999999999999999999998764 45679999
Q ss_pred eecCCCCHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHh-----hCCCccccCCCCCCEEecCCCceEEeeccCCC-
Q 045127 315 EWTNGGNVELWLS-----ESAPSWKHRLKVLIGVVEAMCYLQ-----EQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY- 383 (508)
Q Consensus 315 e~~~~gsL~~~l~-----~~~l~~~~~~~i~~~i~~~L~~LH-----~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~- 383 (508)
||+++++|.+++. ...+++..+..++.|++.||+||| +. +++|+||||+||+++.++.+|++|||.+.
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~-~i~h~dl~p~nili~~~~~~kl~d~g~~~~ 159 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGN-TVLHRDLKPANIFLDANNNVKLGDFGLAKI 159 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccC-cceecCCCHHHEEEecCCCEEEeccccccc
Confidence 9999999999986 357899999999999999999999 88 99999999999999999999999998632
Q ss_pred --------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhc
Q 045127 384 --------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDER 437 (508)
Q Consensus 384 --------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (508)
.++.++||||||+++|+|++|+.||.... ...+.+.+.... .+.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~--~~~~~~~~~~~~--------~~~ 229 (265)
T cd08217 160 LGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARN--QLQLASKIKEGK--------FRR 229 (265)
T ss_pred ccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcC--HHHHHHHHhcCC--------CCC
Confidence 23456899999999999999999997532 111111111110 000
Q ss_pred ccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 438 MMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 438 l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
+ .......+.+++.+|++.+|++||++.+|++.
T Consensus 230 ~-----~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 230 I-----PYRYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred C-----ccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 1 11234567889999999999999999999874
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi |
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-33 Score=277.08 Aligned_cols=164 Identities=15% Similarity=0.189 Sum_probs=138.4
Q ss_pred CceeeecCCeEEEEEEEC---CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEec--CCeeEEEEeec
Q 045127 243 KNLVGKNEGAAIYKGILR---DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNS--RRTRAIVTEWT 317 (508)
Q Consensus 243 ~~~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~~~lv~e~~ 317 (508)
.++||+|+||.||+|... +++.||+|.+..... ...+.+|+.++++++||||+++++++.. +...+++|||+
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~ 82 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI---SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYA 82 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC---cHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEecc
Confidence 468999999999999864 467899999864432 3456789999999999999999998864 45679999998
Q ss_pred CCCCHHHHhc----------cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEe----cCCCceEEeeccCCC
Q 045127 318 NGGNVELWLS----------ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLL----TDNLEPLISRFKIEY 383 (508)
Q Consensus 318 ~~gsL~~~l~----------~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll----~~~~~~kl~Dfg~~~ 383 (508)
. ++|.+++. ...+++..+..++.|++.||+|||++ ||+||||||+|||+ +.++.+||+|||++.
T Consensus 83 ~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~-~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~ 160 (317)
T cd07868 83 E-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN-WVLHRDLKPANILVMGEGPERGRVKIADMGFAR 160 (317)
T ss_pred C-CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC-CEEcCCCCHHHEEEecCCCCcCcEEEeecCcee
Confidence 6 48888765 12588999999999999999999999 99999999999999 456789999998641
Q ss_pred -------------------------------CCCCcchhhHHHHHHHHHHhCCCCCccc
Q 045127 384 -------------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEF 411 (508)
Q Consensus 384 -------------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~ 411 (508)
.++.++||||+||++|||++|+.||...
T Consensus 161 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~ 219 (317)
T cd07868 161 LFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred ccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCC
Confidence 2355789999999999999999999643
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-33 Score=284.09 Aligned_cols=173 Identities=14% Similarity=0.183 Sum_probs=154.1
Q ss_pred cCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCC--CHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEE
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDV--SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVT 314 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 314 (508)
++|+..+.||+|+||.||+|... +++.||+|+++... .......+.+|+.++..++||+|+++++.+.+.+..++||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 46888999999999999999974 68999999996322 2234567889999999999999999999999999999999
Q ss_pred eecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC----------
Q 045127 315 EWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY---------- 383 (508)
Q Consensus 315 e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~---------- 383 (508)
||+++|+|.+++. ...+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||++.
T Consensus 81 E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~-givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~ 159 (360)
T cd05627 81 EFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQL-GFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEF 159 (360)
T ss_pred eCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEccCCCHHHEEECCCCCEEEeeccCCccccccccccc
Confidence 9999999999987 56789999999999999999999999 99999999999999999999999999632
Q ss_pred ----------------------------------------------------CCCCcchhhHHHHHHHHHHhCCCCCccc
Q 045127 384 ----------------------------------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEF 411 (508)
Q Consensus 384 ----------------------------------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~ 411 (508)
.++.++|||||||++|||++|+.||...
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~~ 239 (360)
T cd05627 160 YRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSE 239 (360)
T ss_pred ccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCCC
Confidence 2456789999999999999999999753
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-33 Score=275.76 Aligned_cols=234 Identities=13% Similarity=0.167 Sum_probs=175.9
Q ss_pred CCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCC-HHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEee
Q 045127 239 GFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVS-REIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEW 316 (508)
Q Consensus 239 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 316 (508)
+|+..+.||+|+||.||+|.. .+|+.||+|.+..... ......+.+|++++++++||||+++++++.+....++++||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 477889999999999999997 4689999999864322 22345678899999999999999999999999999999999
Q ss_pred cCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-----------
Q 045127 317 TNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY----------- 383 (508)
Q Consensus 317 ~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~----------- 383 (508)
++ ++|.+++. ...+++..+..++.||++||+|||+. +++||||||+||+++.++.+||+|||.+.
T Consensus 81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~-~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~ 158 (284)
T cd07839 81 CD-QDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSH-NVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRCYSA 158 (284)
T ss_pred CC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CEecCCCCHHHEEEcCCCcEEECccchhhccCCCCCCcCC
Confidence 97 47877765 56789999999999999999999999 99999999999999999999999998532
Q ss_pred -----------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccc--h----hhhhhhhc-cc
Q 045127 384 -----------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPE--N----LQLVVDER-MM 439 (508)
Q Consensus 384 -----------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~~-l~ 439 (508)
.++.++|||||||++|||+||..|+.........+.......... . .....+.. ..
T Consensus 159 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (284)
T cd07839 159 EVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYP 238 (284)
T ss_pred CccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccC
Confidence 235678999999999999999998753322211111111100000 0 00000000 00
Q ss_pred CCcc-------hHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 440 LTEN-------MFDQAEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 440 ~~~~-------~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
.... .......+.+++.+||+.||.+|||++|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 239 MYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred CCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 0000 0012456778999999999999999999976
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-33 Score=280.29 Aligned_cols=164 Identities=16% Similarity=0.238 Sum_probs=143.6
Q ss_pred hhcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEE
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVT 314 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 314 (508)
...+|+..+.||+|+||.||+|... +++.||+|+.... ....|+.++++++||||+++++++......++||
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~-------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 136 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG-------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVL 136 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc-------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEE
Confidence 3457999999999999999999974 5788999986432 2346899999999999999999999999999999
Q ss_pred eecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC---------
Q 045127 315 EWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY--------- 383 (508)
Q Consensus 315 e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~--------- 383 (508)
||+. ++|.+++. ...+++..+..|+.||+.||.|||++ ||+||||||+|||++.++.+||+|||.+.
T Consensus 137 e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 214 (357)
T PHA03209 137 PHYS-SDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQ-RIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAPAFL 214 (357)
T ss_pred EccC-CcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEECCCCCEEEecCccccccccCcccc
Confidence 9995 58888876 56789999999999999999999999 99999999999999999999999998742
Q ss_pred -----------------CCCCcchhhHHHHHHHHHHhCCCCC
Q 045127 384 -----------------QHRSTKYVYKFGLFLLEMITNRRPL 408 (508)
Q Consensus 384 -----------------~~~~~~Dv~SlGvil~elltg~~P~ 408 (508)
.++.++|||||||++|||+++..|+
T Consensus 215 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 215 GLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred cccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 3456899999999999999865554
|
|
| >cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-33 Score=273.71 Aligned_cols=224 Identities=14% Similarity=0.190 Sum_probs=181.8
Q ss_pred hcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEe
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTE 315 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 315 (508)
.++|+..+.||+|+||.||+|.. .++..|++|.+...... ..+.+.+|+.++++++||||+++++++...+..++|+|
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~-~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e 96 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQP-KKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVME 96 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccch-HHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEe
Confidence 36788999999999999999986 46889999998543322 45678899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC-------------
Q 045127 316 WTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE------------- 382 (508)
Q Consensus 316 ~~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~------------- 382 (508)
|+++++|.+++....+++..+..++.|++.||+|||++ |++||||||+||+++.++.++|+|||.+
T Consensus 97 ~~~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~-gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~~~~~ 175 (293)
T cd06647 97 YLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSN-QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTM 175 (293)
T ss_pred cCCCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhC-CEeeccCCHHHEEEcCCCCEEEccCcceecccccccccccc
Confidence 99999999999877889999999999999999999999 9999999999999999999999999853
Q ss_pred --------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHH
Q 045127 383 --------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQA 448 (508)
Q Consensus 383 --------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 448 (508)
..++.++||||||+++|++++|+.||........ +.. ... .. .+.+. ......
T Consensus 176 ~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~-~~~-~~~---~~-----~~~~~---~~~~~~ 242 (293)
T cd06647 176 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA-LYL-IAT---NG-----TPELQ---NPEKLS 242 (293)
T ss_pred cCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhh-eee-hhc---CC-----CCCCC---CccccC
Confidence 1245679999999999999999999974322110 000 000 00 00000 011123
Q ss_pred HHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 449 EQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 449 ~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
..+.+++.+||+.+|++||++.+++.+
T Consensus 243 ~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 243 AIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred HHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 457788999999999999999999876
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi |
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-33 Score=272.43 Aligned_cols=233 Identities=14% Similarity=0.173 Sum_probs=169.7
Q ss_pred CCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCH-HHHHHHHHHHHHHhhc---CCCCccceeeEEec-----CC
Q 045127 239 GFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSR-EIRDEFVEECKLLVQF---QHKNLIRVLGWNNS-----RR 308 (508)
Q Consensus 239 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l---~h~niv~~~~~~~~-----~~ 308 (508)
+|+..+.||+|+||.||+|... +++.||+|.++..... .....+.+|+.+++.+ +||||+++++++.. ..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 4788899999999999999974 6899999998643222 1223455677776655 69999999998764 24
Q ss_pred eeEEEEeecCCCCHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC--
Q 045127 309 TRAIVTEWTNGGNVELWLS---ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY-- 383 (508)
Q Consensus 309 ~~~lv~e~~~~gsL~~~l~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~-- 383 (508)
..+++|||+++ +|.+++. ...+++..+..++.|++.||+|||+. |++||||||+||+++.++.+||+|||.+.
T Consensus 81 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~ivH~dikp~Nili~~~~~~kl~dfg~~~~~ 158 (288)
T cd07863 81 KVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHAN-CIVHRDLKPENILVTSGGQVKLADFGLARIY 158 (288)
T ss_pred eEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEECCCCCEEECccCccccc
Confidence 57999999975 8888886 24589999999999999999999999 99999999999999999999999998642
Q ss_pred ------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhc-c--chhhh----
Q 045127 384 ------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHY-P--ENLQL---- 432 (508)
Q Consensus 384 ------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~-~--~~~~~---- 432 (508)
.++.++||||+||++|||++|+.||....... .+........ + .....
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 237 (288)
T cd07863 159 SCQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD-QLGKIFDLIGLPPEDDWPRDVTL 237 (288)
T ss_pred cCcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHH-HHHHHHHHhCCCChhhCcccccc
Confidence 24567999999999999999999986432211 1111111000 0 00000
Q ss_pred ---hhhhcccCC--cchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 433 ---VVDERMMLT--ENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 433 ---~~~~~l~~~--~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
...+..... .........+.+++.+|++.||++|||+.|++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 238 PRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred cccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 000000000 000012345678999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-33 Score=275.24 Aligned_cols=221 Identities=14% Similarity=0.202 Sum_probs=177.8
Q ss_pred CCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEeecC
Q 045127 240 FSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWTN 318 (508)
Q Consensus 240 ~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 318 (508)
|+....||+|+||.||+|.. .+++.||+|.+..... ...+.+.+|+.+++.++||||+++++++..++..+++|||++
T Consensus 23 ~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~-~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~ 101 (297)
T cd06659 23 LENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQ-QRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQ 101 (297)
T ss_pred HHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEeccc-chHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCC
Confidence 33446799999999999987 4689999999864332 245678899999999999999999999999999999999999
Q ss_pred CCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC----------------
Q 045127 319 GGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE---------------- 382 (508)
Q Consensus 319 ~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~---------------- 382 (508)
+++|..++....+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++
T Consensus 102 ~~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~-~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~ 180 (297)
T cd06659 102 GGALTDIVSQTRLNEEQIATVCESVLQALCYLHSQ-GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGT 180 (297)
T ss_pred CCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHeEEccCCcEEEeechhHhhcccccccccceecC
Confidence 99999998877899999999999999999999999 9999999999999999999999999863
Q ss_pred -----------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHHHHH
Q 045127 383 -----------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQAEQG 451 (508)
Q Consensus 383 -----------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l 451 (508)
..++.++|||||||++|||++|+.||....... ....+.... .+..... ......+
T Consensus 181 ~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~--~~~~~~~~~--------~~~~~~~---~~~~~~l 247 (297)
T cd06659 181 PYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQ--AMKRLRDSP--------PPKLKNA---HKISPVL 247 (297)
T ss_pred ccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHhccC--------CCCcccc---CCCCHHH
Confidence 134567999999999999999999986432111 111111100 0000000 0113456
Q ss_pred HHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 452 LGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 452 ~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
.+++.+|++.+|++||++.++++.
T Consensus 248 ~~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 248 RDFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred HHHHHHHhcCCcccCcCHHHHhhC
Confidence 788899999999999999999985
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >PHA03207 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-33 Score=284.91 Aligned_cols=231 Identities=13% Similarity=0.170 Sum_probs=175.5
Q ss_pred hcCCCCCceeeecCCeEEEEEEEC---CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEE
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGILR---DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIV 313 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 313 (508)
..+|+..+.||+|+||.||++... .+..||+|.+... ....+|++++++++||||+++++++......+++
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~------~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv 164 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG------KTPGREIDILKTISHRAIINLIHAYRWKSTVCMV 164 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc------ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEE
Confidence 357999999999999999999753 3578999988543 2346899999999999999999999999999999
Q ss_pred EeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC---------
Q 045127 314 TEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY--------- 383 (508)
Q Consensus 314 ~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~--------- 383 (508)
||++. ++|.+++. ...+++.++..++.|++.||+|||++ ||+||||||+|||++.++.++|+|||++.
T Consensus 165 ~e~~~-~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~-givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~ 242 (392)
T PHA03207 165 MPKYK-CDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGR-GIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTP 242 (392)
T ss_pred ehhcC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCHHHEEEcCCCCEEEccCccccccCcccccc
Confidence 99995 58888886 56789999999999999999999999 99999999999999999999999998742
Q ss_pred --------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCc--ccHHHHHHHh------ccch----hh
Q 045127 384 --------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGE--AGFIEYIRMH------YPEN----LQ 431 (508)
Q Consensus 384 --------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~--~~~~~~~~~~------~~~~----~~ 431 (508)
.++.++|||||||++|||++|+.||....... ..+...++.. ++.. +.
T Consensus 243 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~ 322 (392)
T PHA03207 243 QCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLC 322 (392)
T ss_pred cccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHH
Confidence 24567999999999999999999997543221 1111111110 0000 00
Q ss_pred hhhh-------hcccCCcc--hHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 432 LVVD-------ERMMLTEN--MFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 432 ~~~~-------~~l~~~~~--~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
..+. +....... .......+.+++.+|+..||++|||+.|+++.
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~ 375 (392)
T PHA03207 323 KHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL 375 (392)
T ss_pred HHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence 0000 00000000 00113456678899999999999999999876
|
|
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-32 Score=270.24 Aligned_cols=225 Identities=14% Similarity=0.196 Sum_probs=183.4
Q ss_pred HhhcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEE
Q 045127 235 AATNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIV 313 (508)
Q Consensus 235 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 313 (508)
..++.|+..+.||+|++|.||+|.+. ++..|++|++..... ....+.+|++.+++++|+|++++++++......+++
T Consensus 16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 93 (286)
T cd06614 16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ--NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVV 93 (286)
T ss_pred CccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch--hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEE
Confidence 45677888999999999999999985 689999999965433 456788999999999999999999999999999999
Q ss_pred EeecCCCCHHHHhccC--CCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC---------
Q 045127 314 TEWTNGGNVELWLSES--APSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE--------- 382 (508)
Q Consensus 314 ~e~~~~gsL~~~l~~~--~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~--------- 382 (508)
+||+++++|.+++... .+++..+..++.|++.||+|||+. |++|+||+|+||+++.++.++|+|||.+
T Consensus 94 ~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~-gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~ 172 (286)
T cd06614 94 MEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQ-NVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSK 172 (286)
T ss_pred EeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhC-CeeeCCCChhhEEEcCCCCEEECccchhhhhccchhh
Confidence 9999999999999854 799999999999999999999999 9999999999999999999999999752
Q ss_pred ------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcch
Q 045127 383 ------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENM 444 (508)
Q Consensus 383 ------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 444 (508)
..++.++||||||+++|+|++|+.||....... ....... .........
T Consensus 173 ~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~-~~~~~~~------------~~~~~~~~~ 239 (286)
T cd06614 173 RNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLR-ALFLITT------------KGIPPLKNP 239 (286)
T ss_pred hccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHh------------cCCCCCcch
Confidence 124568999999999999999999986432111 0110000 000000011
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 445 FDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 445 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
......+.+++.+||+.+|.+|||+.++++.
T Consensus 240 ~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 270 (286)
T cd06614 240 EKWSPEFKDFLNKCLVKDPEKRPSAEELLQH 270 (286)
T ss_pred hhCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 1124567789999999999999999999863
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-33 Score=271.78 Aligned_cols=234 Identities=15% Similarity=0.212 Sum_probs=176.8
Q ss_pred CCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCH-HHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEee
Q 045127 239 GFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSR-EIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEW 316 (508)
Q Consensus 239 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 316 (508)
+|+..+.||.|++|.||+|... +++.||||.+...... .....+.+|++++++++||||+++++++.++...++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 4788899999999999999974 6899999998643322 2346788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC----------
Q 045127 317 TNGGNVELWLS---ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY---------- 383 (508)
Q Consensus 317 ~~~gsL~~~l~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~---------- 383 (508)
+. ++|..++. ...+++..+..++.|++.||+|||+. +++||||+|+||+++.++.+|++|||.+.
T Consensus 81 ~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~-~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~ 158 (284)
T cd07860 81 LH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT 158 (284)
T ss_pred cc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEECCCCCEEEeeccchhhcccCccccc
Confidence 96 58988876 35689999999999999999999999 99999999999999999999999997531
Q ss_pred ------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhc-cch-hh----hhhh--hc
Q 045127 384 ------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHY-PEN-LQ----LVVD--ER 437 (508)
Q Consensus 384 ------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~-~~~-~~----~~~~--~~ 437 (508)
.++.++||||||+++|||+||+.||....... ...+...... +.. .. .... ..
T Consensus 159 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd07860 159 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID-QLFRIFRTLGTPDEVVWPGVTSLPDYKPS 237 (284)
T ss_pred cccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHHHHhCCCChhhhhhhhHHHHHHhh
Confidence 12457999999999999999999996432111 1111111100 000 00 0000 00
Q ss_pred ccC-Cc-c----hHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 438 MML-TE-N----MFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 438 l~~-~~-~----~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
+.. .. . .......+.+++.+|++.||++|||++|+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 281 (284)
T cd07860 238 FPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAH 281 (284)
T ss_pred cccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcC
Confidence 000 00 0 00113456789999999999999999999853
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-32 Score=265.48 Aligned_cols=222 Identities=16% Similarity=0.181 Sum_probs=174.1
Q ss_pred cCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCC----CHHHHHHHHHHHHHHhhcCCCCccceeeEEecC--Cee
Q 045127 238 NGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDV----SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSR--RTR 310 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~ 310 (508)
.+|+..+.||+|+||.||+|.. .++..||+|.+.... .....+.+.+|+.++++++||||+++++++.+. ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 4788899999999999999997 458999999885321 123456789999999999999999999988763 467
Q ss_pred EEEEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC------
Q 045127 311 AIVTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------ 383 (508)
Q Consensus 311 ~lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------ 383 (508)
+++|||+++++|.+++. ...+++..+.+++.|++.||+|||+. +++|+||||+||+++.++.++|+|||.+.
T Consensus 82 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~-~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~ 160 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSN-MIVHRDIKGANILRDSVGNVKLGDFGASKRLQTIC 160 (265)
T ss_pred EEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC-CEecCCCCHHHEEecCCCCEEECcCcccccccccc
Confidence 89999999999999987 45689999999999999999999999 99999999999999999999999998542
Q ss_pred ------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhccc
Q 045127 384 ------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMM 439 (508)
Q Consensus 384 ------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 439 (508)
..+.++|||||||++|||++|+.||...... ........ .. ..+.
T Consensus 161 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~----~~~~~~~~-~~----~~~~-- 229 (265)
T cd06652 161 LSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAM----AAIFKIAT-QP----TNPV-- 229 (265)
T ss_pred ccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchH----HHHHHHhc-CC----CCCC--
Confidence 2345789999999999999999999643211 11111000 00 0010
Q ss_pred CCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 440 LTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 440 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
........+.+++.+|+. +|++||+++||++.
T Consensus 230 ---~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~ 261 (265)
T cd06652 230 ---LPPHVSDHCRDFLKRIFV-EAKLRPSADELLRH 261 (265)
T ss_pred ---CchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcC
Confidence 111223456677788884 89999999999753
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-33 Score=290.65 Aligned_cols=239 Identities=12% Similarity=0.124 Sum_probs=172.9
Q ss_pred HHHHhhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCC------CCccceeeEE
Q 045127 232 MLKAATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQH------KNLIRVLGWN 304 (508)
Q Consensus 232 ~l~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h------~niv~~~~~~ 304 (508)
++...+++|+..++||+|+||.||+|.. ..++.||||+++... .....+..|+.++++++| .+++++++++
T Consensus 123 ~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~ 200 (467)
T PTZ00284 123 DIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP--KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYF 200 (467)
T ss_pred ccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch--hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEE
Confidence 3445678899999999999999999997 458899999996422 233455667777777654 4588888888
Q ss_pred ecC-CeeEEEEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCC----------
Q 045127 305 NSR-RTRAIVTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNL---------- 372 (508)
Q Consensus 305 ~~~-~~~~lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~---------- 372 (508)
... ...++|||++ +++|.+++. ...+++..+..|+.||+.||+|||+++||+||||||+|||++.++
T Consensus 201 ~~~~~~~~iv~~~~-g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~ 279 (467)
T PTZ00284 201 QNETGHMCIVMPKY-GPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRA 279 (467)
T ss_pred EcCCceEEEEEecc-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccc
Confidence 754 5788999988 678888876 567999999999999999999999733999999999999998665
Q ss_pred ------ceEEeeccCC------------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHH
Q 045127 373 ------EPLISRFKIE------------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYI 422 (508)
Q Consensus 373 ------~~kl~Dfg~~------------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~ 422 (508)
.+||+|||.+ ..++.++|||||||++|||++|+.||+.....+ ....+
T Consensus 280 ~~~~~~~vkl~DfG~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~--~~~~i 357 (467)
T PTZ00284 280 LPPDPCRVRICDLGGCCDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLE--HLHLM 357 (467)
T ss_pred cCCCCceEEECCCCccccCccccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH--HHHHH
Confidence 4999999853 235678899999999999999999997533211 11111
Q ss_pred HHh---ccch---------hhhhhhhccc--------------C--CcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 423 RMH---YPEN---------LQLVVDERMM--------------L--TENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 423 ~~~---~~~~---------~~~~~~~~l~--------------~--~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
... .+.. ..+.++.... . ..........+.+++.+||+.||++|||++|+++
T Consensus 358 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~ 437 (467)
T PTZ00284 358 EKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTT 437 (467)
T ss_pred HHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhc
Confidence 111 0100 0011100000 0 0000011345678999999999999999999997
Q ss_pred H
Q 045127 475 M 475 (508)
Q Consensus 475 ~ 475 (508)
.
T Consensus 438 H 438 (467)
T PTZ00284 438 H 438 (467)
T ss_pred C
Confidence 3
|
|
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-33 Score=277.84 Aligned_cols=226 Identities=15% Similarity=0.114 Sum_probs=174.6
Q ss_pred cCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCC--CHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEE
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDV--SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVT 314 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 314 (508)
++|+..+.||+|+||.||+++.. +++.||+|++.... .......+.+|..++..++|++|+++++++.+++..|+||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 46888999999999999999974 67899999986421 2223456888999999999999999999999999999999
Q ss_pred eecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC----------
Q 045127 315 EWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE---------- 382 (508)
Q Consensus 315 e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~---------- 382 (508)
||+++|+|.+++. ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 81 Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~-~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 159 (331)
T cd05624 81 DYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQL-HYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQ 159 (331)
T ss_pred eCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeccCchHHEEEcCCCCEEEEeccceeeccCCCcee
Confidence 9999999999997 46789999999999999999999999 9999999999999999999999999863
Q ss_pred -----------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhccc
Q 045127 383 -----------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMM 439 (508)
Q Consensus 383 -----------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 439 (508)
..++.++|||||||++|||++|+.||..... ........... ..+.
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~-----~~~~~~i~~~~------~~~~ 228 (331)
T cd05624 160 SSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESL-----VETYGKIMNHE------ERFQ 228 (331)
T ss_pred eccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCH-----HHHHHHHHcCC------Cccc
Confidence 1245678999999999999999999974321 11111111100 0000
Q ss_pred CCcchHHHHHHHHHHHHhcCCCCCCC--CCCHHHHHHH
Q 045127 440 LTENMFDQAEQGLGLGLMCTDQPTGK--LPSLVQIYNM 475 (508)
Q Consensus 440 ~~~~~~~~~~~l~~l~~~Cl~~dP~~--RPs~~evl~~ 475 (508)
...........+.+++.+|+..++++ |++++++++.
T Consensus 229 ~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h 266 (331)
T cd05624 229 FPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKH 266 (331)
T ss_pred CCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence 00000112345667777877765544 5688888764
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=285.44 Aligned_cols=218 Identities=19% Similarity=0.242 Sum_probs=182.7
Q ss_pred CCceeeecCCeEEEEEEEC--CC--CEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEeec
Q 045127 242 KKNLVGKNEGAAIYKGILR--DG--TRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWT 317 (508)
Q Consensus 242 ~~~~lg~G~~g~V~~~~~~--~~--~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 317 (508)
..++||+|.||.|++|.|. +| -.||||.++.+.......+|.+|+.+|.+|+|||++++||+..+ ....+|||.+
T Consensus 114 l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~ELa 192 (1039)
T KOG0199|consen 114 LYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFELA 192 (1039)
T ss_pred HHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhhc
Confidence 3488999999999999984 34 46899999876666678999999999999999999999999987 6678999999
Q ss_pred CCCCHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC------------
Q 045127 318 NGGNVELWLS---ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE------------ 382 (508)
Q Consensus 318 ~~gsL~~~l~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~------------ 382 (508)
+.|+|.+.++ ...+......+++.|||.|+.||.++ +.|||||...|+++-....+||+|||+.
T Consensus 193 plGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLesk-rlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Yvm 271 (1039)
T KOG0199|consen 193 PLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESK-RLVHRDLAARNLLLASPRTVKICDFGLMRALGENEDMYVM 271 (1039)
T ss_pred ccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhh-hhhhhhhhhhhheecccceeeeecccceeccCCCCcceEe
Confidence 9999999998 45677888899999999999999999 9999999999999999999999999873
Q ss_pred ------------------CCCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcc
Q 045127 383 ------------------YQHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTEN 443 (508)
Q Consensus 383 ------------------~~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 443 (508)
+.++.++|||+|||++||||| |+.||.+.... . +.+.+|..- ....
T Consensus 272 ~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~--q------------IL~~iD~~e-rLpR 336 (1039)
T KOG0199|consen 272 APQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGI--Q------------ILKNIDAGE-RLPR 336 (1039)
T ss_pred cCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHH--H------------HHHhccccc-cCCC
Confidence 356789999999999999999 88999754311 1 222333211 1122
Q ss_pred hHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHH
Q 045127 444 MFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMI 476 (508)
Q Consensus 444 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L 476 (508)
...+.+.+.+++..||..+|.+|||+..|.+.+
T Consensus 337 Pk~csedIY~imk~cWah~paDRptFsair~~~ 369 (1039)
T KOG0199|consen 337 PKYCSEDIYQIMKNCWAHNPADRPTFSAIREDL 369 (1039)
T ss_pred CCCChHHHHHHHHHhccCCccccccHHHHHHhH
Confidence 235688899999999999999999999998554
|
|
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-32 Score=268.88 Aligned_cols=221 Identities=13% Similarity=0.188 Sum_probs=179.1
Q ss_pred CCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEeec
Q 045127 239 GFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWT 317 (508)
Q Consensus 239 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 317 (508)
.|...+.||+|++|.||++.. .+++.+++|.+.... ....+.+.+|+.+++.++||||+++++++..++..++++||+
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~ 98 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRK-QQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFL 98 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccc-hhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEecc
Confidence 455568999999999999996 468999999985432 234566889999999999999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC---------------
Q 045127 318 NGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE--------------- 382 (508)
Q Consensus 318 ~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~--------------- 382 (508)
++++|.+++....+++..+..++.|++.||+|||++ |++||||+|+||+++.++.++++|||.+
T Consensus 99 ~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~ 177 (285)
T cd06648 99 EGGALTDIVTHTRMNEEQIATVCLAVLKALSFLHAQ-GVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRKSLVG 177 (285)
T ss_pred CCCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCChhhEEEcCCCcEEEcccccchhhccCCcccccccC
Confidence 999999999887899999999999999999999999 9999999999999999999999999853
Q ss_pred ------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHHHH
Q 045127 383 ------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQAEQ 450 (508)
Q Consensus 383 ------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 450 (508)
..++.++||||||+++|||++|+.||..... ........ ....+.+... ......
T Consensus 178 ~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~-----~~~~~~~~-----~~~~~~~~~~---~~~~~~ 244 (285)
T cd06648 178 TPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPP-----LQAMKRIR-----DNLPPKLKNL---HKVSPR 244 (285)
T ss_pred CccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCH-----HHHHHHHH-----hcCCCCCccc---ccCCHH
Confidence 1346789999999999999999999864221 11111110 0001111100 112356
Q ss_pred HHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 451 GLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 451 l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
+.+++.+||+.+|++|||+.++++
T Consensus 245 l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 245 LRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred HHHHHHHHcccChhhCcCHHHHcc
Confidence 788999999999999999999986
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-32 Score=262.96 Aligned_cols=221 Identities=19% Similarity=0.223 Sum_probs=177.5
Q ss_pred CCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCC-CHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEee
Q 045127 239 GFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDV-SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEW 316 (508)
Q Consensus 239 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 316 (508)
+|+..+.||+|++|.||++.. .+++.+|+|.+.... .......+.+|++++++++|||++++++.+..++..++||||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 477889999999999999987 468899999986432 334567899999999999999999999999988999999999
Q ss_pred cCCCCHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCC-CceEEeeccCCC---------
Q 045127 317 TNGGNVELWLSE---SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDN-LEPLISRFKIEY--------- 383 (508)
Q Consensus 317 ~~~gsL~~~l~~---~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~-~~~kl~Dfg~~~--------- 383 (508)
+++++|.+++.. ..+++..+..++.|+++|++|||++ |++||||||+||+++++ +.+|++|||.+.
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~-~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~ 159 (256)
T cd08220 81 APGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTK-LILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSKAY 159 (256)
T ss_pred CCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCcccc
Confidence 999999999973 3589999999999999999999999 99999999999999854 468999997632
Q ss_pred -----------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHH
Q 045127 384 -----------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFD 446 (508)
Q Consensus 384 -----------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 446 (508)
..+.++||||||+++|+|++|+.||....... ....... .... .+. ..
T Consensus 160 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~--~~~~~~~---~~~~-----~~~-----~~ 224 (256)
T cd08220 160 TVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPA--LVLKIMS---GTFA-----PIS-----DR 224 (256)
T ss_pred ccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHH--HHHHHHh---cCCC-----CCC-----CC
Confidence 23567999999999999999999986432111 1111110 0000 000 01
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 447 QAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 447 ~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
....+.+++.+||+.+|++|||+.|+++.
T Consensus 225 ~~~~l~~li~~~l~~~p~~Rpt~~~ll~~ 253 (256)
T cd08220 225 YSPDLRQLILSMLNLDPSKRPQLSQIMAQ 253 (256)
T ss_pred cCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 24457789999999999999999999864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-33 Score=267.63 Aligned_cols=221 Identities=14% Similarity=0.168 Sum_probs=179.6
Q ss_pred CCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCC--CHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEe
Q 045127 239 GFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDV--SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTE 315 (508)
Q Consensus 239 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 315 (508)
+|+..+.||.|+||.||+|... ++..||+|.+.... .....+.+.+|++++++++||||+++++++..+...++|||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 4788899999999999999974 68999999996432 22356789999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccC-CCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-----------
Q 045127 316 WTNGGNVELWLSES-APSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY----------- 383 (508)
Q Consensus 316 ~~~~gsL~~~l~~~-~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~----------- 383 (508)
|+++++|.+++... .+++..+..++.|+++||.|||+. +++|+||+|+||++++++.++++|||...
T Consensus 81 ~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~-~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~ 159 (258)
T cd05578 81 LLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSK-GIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTLTTST 159 (258)
T ss_pred CCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHHHeEEcCCCCEEEeecccccccCCCcccccc
Confidence 99999999999844 899999999999999999999999 99999999999999999999999997632
Q ss_pred ---------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHH
Q 045127 384 ---------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQA 448 (508)
Q Consensus 384 ---------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 448 (508)
..+.++|+||||+++|+|++|+.||...... ....+...... ...... ....
T Consensus 160 ~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~---~~~~~~~~~~~-------~~~~~~---~~~~ 226 (258)
T cd05578 160 SGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRT---IRDQIRAKQET-------ADVLYP---ATWS 226 (258)
T ss_pred CCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCcc---HHHHHHHHhcc-------ccccCc---ccCc
Confidence 2367899999999999999999999754322 11111111110 000000 1123
Q ss_pred HHHHHHHHhcCCCCCCCCCCH--HHHH
Q 045127 449 EQGLGLGLMCTDQPTGKLPSL--VQIY 473 (508)
Q Consensus 449 ~~l~~l~~~Cl~~dP~~RPs~--~evl 473 (508)
..+.+++.+||+.||.+||++ +|++
T Consensus 227 ~~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 227 TEAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred HHHHHHHHHHccCChhHcCCccHHHHh
Confidence 667789999999999999999 6654
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-33 Score=284.43 Aligned_cols=217 Identities=21% Similarity=0.227 Sum_probs=177.2
Q ss_pred ceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEeecCCCCH
Q 045127 244 NLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWTNGGNV 322 (508)
Q Consensus 244 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 322 (508)
-+||+|.||+||.|++. +...+|||-+....+ +..+-+..|+...++++|.|||+++|.+..++..-|.||-++||+|
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekds-r~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSL 659 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDS-REVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSL 659 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeecccccc-hhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcH
Confidence 46999999999999974 466799999954433 3667789999999999999999999999999999999999999999
Q ss_pred HHHhc--cCCC--CHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEec-CCCceEEeeccCC---------------
Q 045127 323 ELWLS--ESAP--SWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLT-DNLEPLISRFKIE--------------- 382 (508)
Q Consensus 323 ~~~l~--~~~l--~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~-~~~~~kl~Dfg~~--------------- 382 (508)
.++++ -+++ .+.+.--+..||++||.|||++ .|||||||.+|||++ -.|.+||+|||.+
T Consensus 660 SsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen-~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TETFTG 738 (1226)
T KOG4279|consen 660 SSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHEN-KIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTETFTG 738 (1226)
T ss_pred HHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhc-ceeeccccCCcEEEeeccceEEecccccchhhccCCcccccccc
Confidence 99998 4455 6677778899999999999999 999999999999997 6899999999874
Q ss_pred --------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHH
Q 045127 383 --------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQA 448 (508)
Q Consensus 383 --------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 448 (508)
+.|..++|||||||++.||.||++||.+.......+ ++-. +.. +.| +-..+..
T Consensus 739 TLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAM---FkVG----myK-vHP-----~iPeels 805 (1226)
T KOG4279|consen 739 TLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAM---FKVG----MYK-VHP-----PIPEELS 805 (1226)
T ss_pred chhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhh---hhhc----cee-cCC-----CCcHHHH
Confidence 356788999999999999999999998654332111 1110 000 111 1123446
Q ss_pred HHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 449 EQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 449 ~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
.+...++++|+.+||.+||++.++++.
T Consensus 806 aeak~FilrcFepd~~~R~sA~~LL~D 832 (1226)
T KOG4279|consen 806 AEAKNFILRCFEPDPCDRPSAKDLLQD 832 (1226)
T ss_pred HHHHHHHHHHcCCCcccCccHHHhccC
Confidence 677889999999999999999999864
|
|
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-32 Score=269.99 Aligned_cols=221 Identities=15% Similarity=0.125 Sum_probs=179.2
Q ss_pred cCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCC--CHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEE
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDV--SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVT 314 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 314 (508)
++|+..+.||+|++|.||++... +++.||+|++.... .....+.+.+|++++++++||||+++++++..+...++||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 46888899999999999999974 68999999986432 1234567889999999999999999999999999999999
Q ss_pred eecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC----------
Q 045127 315 EWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY---------- 383 (508)
Q Consensus 315 e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~---------- 383 (508)
||+++++|.+++. ...+++..+..++.|++.||+|||+. |++||||+|+||+++.++.+||+|||++.
T Consensus 81 e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~-~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~ 159 (290)
T cd05580 81 EYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSL-DIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGRTYTLC 159 (290)
T ss_pred ecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC-CEecCCCCHHHEEECCCCCEEEeeCCCccccCCCCCCCC
Confidence 9999999999987 56789999999999999999999999 99999999999999999999999998643
Q ss_pred --------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHHH
Q 045127 384 --------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQAE 449 (508)
Q Consensus 384 --------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 449 (508)
..+.++||||||+++|+|++|+.||...... .. .... ......... ....
T Consensus 160 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~---~~~~--------~~~~~~~~~---~~~~ 223 (290)
T cd05580 160 GTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPI--QI---YEKI--------LEGKVRFPS---FFSP 223 (290)
T ss_pred CCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH--HH---HHHH--------hcCCccCCc---cCCH
Confidence 2345789999999999999999999743311 01 1110 111110000 1134
Q ss_pred HHHHHHHhcCCCCCCCCC-----CHHHHHHH
Q 045127 450 QGLGLGLMCTDQPTGKLP-----SLVQIYNM 475 (508)
Q Consensus 450 ~l~~l~~~Cl~~dP~~RP-----s~~evl~~ 475 (508)
.+.+++.+||+.||.+|| +++|+++.
T Consensus 224 ~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~ 254 (290)
T cd05580 224 DAKDLIRNLLQVDLTKRLGNLKNGVNDIKNH 254 (290)
T ss_pred HHHHHHHHHccCCHHHccCcccCCHHHHHcC
Confidence 567888999999999999 77777743
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-33 Score=271.22 Aligned_cols=226 Identities=14% Similarity=0.196 Sum_probs=175.9
Q ss_pred CCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcC-CCCccceeeEEecCCeeEEEEee
Q 045127 239 GFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQ-HKNLIRVLGWNNSRRTRAIVTEW 316 (508)
Q Consensus 239 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~ 316 (508)
+|+..+.||+|+||.||++.. .+++.||+|.+...........+.+|+.++.++. ||||+++++++..+...+++|||
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~ 84 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL 84 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence 455668899999999999997 4689999999875544456678899999999996 99999999999988889999999
Q ss_pred cCCCCHHHHhc------cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-------
Q 045127 317 TNGGNVELWLS------ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------- 383 (508)
Q Consensus 317 ~~~gsL~~~l~------~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------- 383 (508)
+.. ++.++.. ...+++..+..++.|++.||+|||+..+++||||||+||+++.++.++|+|||++.
T Consensus 85 ~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~ 163 (288)
T cd06616 85 MDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSIA 163 (288)
T ss_pred ccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchhHHhccCCc
Confidence 864 5554432 46789999999999999999999974499999999999999999999999998631
Q ss_pred ----------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCC
Q 045127 384 ----------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLT 441 (508)
Q Consensus 384 ----------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 441 (508)
.++.++|||||||++|||++|+.||.... ............. .+.+...
T Consensus 164 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~----~~~~~~~~~~~~~-----~~~~~~~ 234 (288)
T cd06616 164 KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN----SVFDQLTQVVKGD-----PPILSNS 234 (288)
T ss_pred cccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc----hHHHHHhhhcCCC-----CCcCCCc
Confidence 35668999999999999999999997432 1111111111100 0111111
Q ss_pred cchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 442 ENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 442 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
. .......+.+++.+||+.||++|||+++|++.
T Consensus 235 ~-~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 235 E-EREFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred C-CCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 01234567889999999999999999999875
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates |
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-32 Score=274.99 Aligned_cols=226 Identities=15% Similarity=0.107 Sum_probs=173.5
Q ss_pred cCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCC--CHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEE
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDV--SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVT 314 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 314 (508)
++|+..+.||+|+||.||++... +++.+|+|++.... .......+.+|+.++..++|++|+++++++.+....++||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 46888999999999999999974 57889999985321 1223455888999999999999999999999999999999
Q ss_pred eecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC---------
Q 045127 315 EWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY--------- 383 (508)
Q Consensus 315 e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~--------- 383 (508)
||+++|+|.+++. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 81 ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~-~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~~ 159 (332)
T cd05623 81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQL-HYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQ 159 (332)
T ss_pred eccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCCHHHEEECCCCCEEEeecchheecccCCcce
Confidence 9999999999997 46789999999999999999999999 99999999999999999999999998531
Q ss_pred ------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhccc
Q 045127 384 ------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMM 439 (508)
Q Consensus 384 ------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 439 (508)
.++.++|||||||++|||++|+.||.... ..+.......... ...
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~-----~~~~~~~i~~~~~------~~~ 228 (332)
T cd05623 160 SSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAES-----LVETYGKIMNHKE------RFQ 228 (332)
T ss_pred ecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCC-----HHHHHHHHhCCCc------ccc
Confidence 23567999999999999999999997432 1111111111100 000
Q ss_pred CCcchHHHHHHHHHHHHhcCCC--CCCCCCCHHHHHHH
Q 045127 440 LTENMFDQAEQGLGLGLMCTDQ--PTGKLPSLVQIYNM 475 (508)
Q Consensus 440 ~~~~~~~~~~~l~~l~~~Cl~~--dP~~RPs~~evl~~ 475 (508)
...........+.+++.+|+.. ++..|++++|+++.
T Consensus 229 ~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 229 FPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred CCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 0000011233455566666644 44447899999876
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-32 Score=273.44 Aligned_cols=164 Identities=15% Similarity=0.190 Sum_probs=137.8
Q ss_pred CceeeecCCeEEEEEEEC---CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEec--CCeeEEEEeec
Q 045127 243 KNLVGKNEGAAIYKGILR---DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNS--RRTRAIVTEWT 317 (508)
Q Consensus 243 ~~~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~~~lv~e~~ 317 (508)
..+||+|+||.||+|... ++..||+|.+..... ...+.+|++++++++||||+++++++.. +...++||||+
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~ 82 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI---SMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYA 82 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCCC---cHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeee
Confidence 368999999999999964 357899999864432 3457789999999999999999998853 45779999998
Q ss_pred CCCCHHHHhc----------cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEe----cCCCceEEeeccCCC
Q 045127 318 NGGNVELWLS----------ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLL----TDNLEPLISRFKIEY 383 (508)
Q Consensus 318 ~~gsL~~~l~----------~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll----~~~~~~kl~Dfg~~~ 383 (508)
++ +|.+++. ...+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||++.
T Consensus 83 ~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~-~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~ 160 (317)
T cd07867 83 EH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN-WVLHRDLKPANILVMGEGPERGRVKIADMGFAR 160 (317)
T ss_pred CC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC-CEEcCCCCHHHEEEccCCCCCCcEEEeecccee
Confidence 65 7777764 12478899999999999999999999 99999999999999 466899999998642
Q ss_pred -------------------------------CCCCcchhhHHHHHHHHHHhCCCCCccc
Q 045127 384 -------------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEF 411 (508)
Q Consensus 384 -------------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~ 411 (508)
.++.++|||||||++|||+||+.||...
T Consensus 161 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~ 219 (317)
T cd07867 161 LFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred ccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccc
Confidence 2355789999999999999999999643
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-33 Score=271.27 Aligned_cols=235 Identities=13% Similarity=0.169 Sum_probs=179.9
Q ss_pred cCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCC-HHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEe
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVS-REIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTE 315 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 315 (508)
++|+..+.||+|++|.||+|... +++.||+|.++.... ....+.+.+|++++++++|+||+++++++..++..+++||
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 80 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE 80 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence 36888999999999999999975 588999999864332 2345788999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-----------
Q 045127 316 WTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY----------- 383 (508)
Q Consensus 316 ~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~----------- 383 (508)
|++++.+..+.. ...+++.++..++.|++.||+|||+. +++||||+|+||++++++.+||+|||.+.
T Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~-~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~~ 159 (288)
T cd07833 81 YVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSH-NIIHRDIKPENILVSESGVLKLCDFGFARALRARPASPLT 159 (288)
T ss_pred cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHeEECCCCCEEEEeeecccccCCCcccccc
Confidence 999887777665 45689999999999999999999999 99999999999999999999999997521
Q ss_pred ------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHH--Hhccchhhhhh--hhcc---
Q 045127 384 ------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIR--MHYPENLQLVV--DERM--- 438 (508)
Q Consensus 384 ------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~--~~~~~~~~~~~--~~~l--- 438 (508)
.++.++||||||+++|+|++|+.||....... .+..... ...+....... ++..
T Consensus 160 ~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (288)
T cd07833 160 DYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDID-QLYLIQKCLGPLPPSHQELFSSNPRFAGV 238 (288)
T ss_pred CcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCHHHhhhcccCcccccc
Confidence 34567899999999999999999987432211 0110000 00000000000 0000
Q ss_pred --cCCc--------chHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 439 --MLTE--------NMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 439 --~~~~--------~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
.... ........+.+++.+||..+|++|||++++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 239 AFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred ccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 0000 00012567889999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-33 Score=257.70 Aligned_cols=221 Identities=14% Similarity=0.199 Sum_probs=178.3
Q ss_pred CCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcC-CCCccceeeEEecCCeeEEEEeecC
Q 045127 241 SKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQ-HKNLIRVLGWNNSRRTRAIVTEWTN 318 (508)
Q Consensus 241 ~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~ 318 (508)
+....||.|+.|.||+++++ .|..+|||.+.+....++.+++...++++.+-. +|+||+.+|||..+...++.||.|.
T Consensus 95 ~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelMs 174 (391)
T KOG0983|consen 95 ENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELMS 174 (391)
T ss_pred hhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHHH
Confidence 34477999999999999974 589999999998888888889999999877764 9999999999999999999999884
Q ss_pred CCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-------------
Q 045127 319 GGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------------- 383 (508)
Q Consensus 319 ~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------------- 383 (508)
..++.++. .+++++..+-++...+++||.||.++.+|+|||+||+|||+|+.|++|+||||+++
T Consensus 175 -~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkAhtrsAG 253 (391)
T KOG0983|consen 175 -TCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKAHTRSAG 253 (391)
T ss_pred -HHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccceeecccccccccC
Confidence 35666666 67889888899999999999999988899999999999999999999999999853
Q ss_pred ----------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHH
Q 045127 384 ----------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQ 447 (508)
Q Consensus 384 ----------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 447 (508)
.|+-++||||||++++||.||+.||.....+-.-+..... .. .|.+... ...
T Consensus 254 C~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln-~e--------PP~L~~~---~gF 321 (391)
T KOG0983|consen 254 CAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLN-EE--------PPLLPGH---MGF 321 (391)
T ss_pred CccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHh-cC--------CCCCCcc---cCc
Confidence 3455789999999999999999999865433221211111 11 1222111 113
Q ss_pred HHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 448 AEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 448 ~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
...+.+++..|+..|+.+||...++++
T Consensus 322 Sp~F~~fv~~CL~kd~r~RP~Y~~Ll~ 348 (391)
T KOG0983|consen 322 SPDFQSFVKDCLTKDHRKRPKYNKLLE 348 (391)
T ss_pred CHHHHHHHHHHhhcCcccCcchHHHhc
Confidence 556778889999999999999988775
|
|
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-32 Score=269.23 Aligned_cols=233 Identities=12% Similarity=0.107 Sum_probs=179.6
Q ss_pred CCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCC-HHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEee
Q 045127 239 GFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVS-REIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEW 316 (508)
Q Consensus 239 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 316 (508)
+|+..+.||+|++|.||+|.. .+|+.||+|++..... ......+.+|+.++++++||||+++++++..+...++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 477889999999999999997 4689999999865432 33457789999999999999999999999999999999999
Q ss_pred cCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-----------
Q 045127 317 TNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY----------- 383 (508)
Q Consensus 317 ~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~----------- 383 (508)
+ +++|.+++. ...+++.++..++.|+++||+|||+. +++|+||||+||+++.++.++++|||.+.
T Consensus 81 ~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~ 158 (286)
T cd07832 81 M-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHAN-GIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYS 158 (286)
T ss_pred c-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCCccc
Confidence 9 999999986 45689999999999999999999999 99999999999999999999999997521
Q ss_pred ------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccch----hhhhh---h--h
Q 045127 384 ------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPEN----LQLVV---D--E 436 (508)
Q Consensus 384 ------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~----~~~~~---~--~ 436 (508)
.++.++||||+|+++|||++|..||...... ..+ .......... ..+.. + .
T Consensus 159 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (286)
T cd07832 159 HQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDI-EQL-AIVFRTLGTPNEETWPGLTSLPDYNK 236 (286)
T ss_pred cccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHH-HHH-HHHHHHcCCCChHHHhhccCcchhhc
Confidence 1356799999999999999998877543211 111 1111111000 00000 0 0
Q ss_pred -cccCC-c-----chHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 437 -RMMLT-E-----NMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 437 -~l~~~-~-----~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
..... . ........+.+++.+|++.+|.+|||++++++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h 282 (286)
T cd07832 237 ITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH 282 (286)
T ss_pred ccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 00000 0 000124678889999999999999999999864
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-32 Score=284.34 Aligned_cols=231 Identities=16% Similarity=0.181 Sum_probs=173.6
Q ss_pred hhcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEE
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVT 314 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 314 (508)
...+|...+.||+|+||.||+|... .++.||||... ...+.+|++++++++|+||+++++++..++..++||
T Consensus 167 ~~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~-------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~ 239 (461)
T PHA03211 167 AGLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW-------YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVL 239 (461)
T ss_pred ccCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc-------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence 3457999999999999999999985 57899999642 234568999999999999999999999999999999
Q ss_pred eecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC---------
Q 045127 315 EWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY--------- 383 (508)
Q Consensus 315 e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~--------- 383 (508)
|++. ++|..++. ...+++.++..|+.|++.||+|||++ ||+||||||+|||++.++.+||+|||++.
T Consensus 240 e~~~-~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~-gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~ 317 (461)
T PHA03211 240 PKYR-SDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGE-GIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTP 317 (461)
T ss_pred EccC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CEEECcCCHHHEEECCCCCEEEcccCCceecccccccc
Confidence 9995 68888876 34689999999999999999999999 99999999999999999999999998742
Q ss_pred --------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccC------cccHHHHHHHhc------cch--
Q 045127 384 --------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERG------EAGFIEYIRMHY------PEN-- 429 (508)
Q Consensus 384 --------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~------~~~~~~~~~~~~------~~~-- 429 (508)
.++.++|||||||++|||++|..|+...... ...+...+.... +..
T Consensus 318 ~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~ 397 (461)
T PHA03211 318 FHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAG 397 (461)
T ss_pred cccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcc
Confidence 2456789999999999999988765432211 111222221110 000
Q ss_pred --hhhhhhhc--------ccCCcc--hHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 430 --LQLVVDER--------MMLTEN--MFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 430 --~~~~~~~~--------l~~~~~--~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
+....... ...... .......+.+++.+||+.||.+|||+.|+++.
T Consensus 398 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 398 SRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred hHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 00000000 000000 00112356789999999999999999999874
|
|
| >cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-32 Score=265.72 Aligned_cols=231 Identities=12% Similarity=0.086 Sum_probs=174.3
Q ss_pred CCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcC-CCCccceeeEEecC--CeeEEEEe
Q 045127 240 FSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQ-HKNLIRVLGWNNSR--RTRAIVTE 315 (508)
Q Consensus 240 ~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~--~~~~lv~e 315 (508)
|+..+.||+|+||.||+|.. .+++.||+|.++............+|+..+.++. |+|++++++++.++ +..++|||
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 56678999999999999996 4689999999875433323344567899999885 99999999999877 88999999
Q ss_pred ecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC----------
Q 045127 316 WTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY---------- 383 (508)
Q Consensus 316 ~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~---------- 383 (508)
|++ |++.+.+. ...+++.++..++.|++.||+|||+. +++||||||+||+++. +.+||+|||.+.
T Consensus 81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~-~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~~~~ 157 (282)
T cd07831 81 LMD-MNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRN-GIFHRDIKPENILIKD-DILKLADFGSCRGIYSKPPYTE 157 (282)
T ss_pred cCC-ccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC-CceecccCHHHEEEcC-CCeEEEecccccccccCCCcCC
Confidence 997 47877776 35689999999999999999999999 9999999999999999 999999997531
Q ss_pred -----------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccch---hhhhhhhc------
Q 045127 384 -----------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPEN---LQLVVDER------ 437 (508)
Q Consensus 384 -----------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~------ 437 (508)
..+.++|||||||++|||++|+.||...... ............. ........
T Consensus 158 ~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (282)
T cd07831 158 YISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNEL--DQIAKIHDVLGTPDAEVLKKFRKSRHMNYN 235 (282)
T ss_pred CCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHH--HHHHHHHHHcCCCCHHHHHhhccccccccc
Confidence 2356799999999999999999999653321 1112221111110 00000000
Q ss_pred ccC-C-----cchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 438 MML-T-----ENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 438 l~~-~-----~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
... . .........+.+++.+||+.+|++|||++++++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 279 (282)
T cd07831 236 FPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRH 279 (282)
T ss_pred CcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhC
Confidence 000 0 0001225778899999999999999999999863
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. |
| >KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-33 Score=254.62 Aligned_cols=228 Identities=16% Similarity=0.174 Sum_probs=184.4
Q ss_pred HhhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCC-------HHHHHHHHHHHHHHhhc-CCCCccceeeEEe
Q 045127 235 AATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVS-------REIRDEFVEECKLLVQF-QHKNLIRVLGWNN 305 (508)
Q Consensus 235 ~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~-------~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~ 305 (508)
..-+.|...+.+|+|..+.|-++.. ++|..+|+|++..... .+..+.-.+|+.+|+++ .||+|+++.++++
T Consensus 14 ~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~ye 93 (411)
T KOG0599|consen 14 GFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYE 93 (411)
T ss_pred hHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeecc
Confidence 4456788889999999999999886 5688999999853221 12355667899999998 5999999999999
Q ss_pred cCCeeEEEEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC--
Q 045127 306 SRRTRAIVTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE-- 382 (508)
Q Consensus 306 ~~~~~~lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~-- 382 (508)
++...++|+|.|+.|.|.+++. .-.+++....+|+.|+.+|++|||.+ +|||||+||+|||+|++.++||+|||++
T Consensus 94 s~sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~-~IVHRDLKpENILlddn~~i~isDFGFa~~ 172 (411)
T KOG0599|consen 94 SDAFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHAR-NIVHRDLKPENILLDDNMNIKISDFGFACQ 172 (411)
T ss_pred CcchhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHh-hhhhcccChhheeeccccceEEeccceeec
Confidence 9999999999999999999998 67899999999999999999999999 9999999999999999999999999874
Q ss_pred ------------------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhh
Q 045127 383 ------------------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQL 432 (508)
Q Consensus 383 ------------------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (508)
..|+...|+||+|||||.++.|.+||-.... . .+...+.++-.+
T Consensus 173 l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQ--m----lMLR~ImeGkyq 246 (411)
T KOG0599|consen 173 LEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQ--M----LMLRMIMEGKYQ 246 (411)
T ss_pred cCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHH--H----HHHHHHHhcccc
Confidence 2456788999999999999999999863210 0 011111111112
Q ss_pred hhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 433 VVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 433 ~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
.-.+.+ .+......+++.+|++.||.+|.|++|+++.
T Consensus 247 F~speW------adis~~~KdLIsrlLqVdp~~Ritake~LaH 283 (411)
T KOG0599|consen 247 FRSPEW------ADISATVKDLISRLLQVDPTKRITAKEALAH 283 (411)
T ss_pred cCCcch------hhccccHHHHHHHHHeeCchhcccHHHHhcC
Confidence 222222 2335567789999999999999999999875
|
|
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-32 Score=267.02 Aligned_cols=233 Identities=15% Similarity=0.219 Sum_probs=178.2
Q ss_pred CCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEeec
Q 045127 239 GFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWT 317 (508)
Q Consensus 239 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 317 (508)
+|+..+.||.|++|.||+|... +|+.||+|.++..........+.+|+.++++++||||+++++++...+..++||||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM 80 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence 5788899999999999999974 689999999975544334566788999999999999999999999999999999999
Q ss_pred CCCCHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC----------
Q 045127 318 NGGNVELWLSE----SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY---------- 383 (508)
Q Consensus 318 ~~gsL~~~l~~----~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~---------- 383 (508)
++ +|.+++.. ..+++..+..++.|++.||+|||+. |++||||||+||++++++.++++|||.+.
T Consensus 81 ~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~ 158 (284)
T cd07836 81 DK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHEN-RVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNTFS 158 (284)
T ss_pred Cc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHC-CeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCccccc
Confidence 85 88888762 4589999999999999999999999 99999999999999999999999997531
Q ss_pred ------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhc-c--chhhhhh-----hhc
Q 045127 384 ------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHY-P--ENLQLVV-----DER 437 (508)
Q Consensus 384 ------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~-~--~~~~~~~-----~~~ 437 (508)
.++.++||||||+++|+|++|+.||......+ .......... + ....... ...
T Consensus 159 ~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd07836 159 NEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNED-QLLKIFRIMGTPTESTWPGISQLPEYKPT 237 (284)
T ss_pred cccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHH-HHHHHHHHhCCCChhhHHHHhcCchhccc
Confidence 23557899999999999999999997543221 1111111000 0 0000000 000
Q ss_pred ccCCc-c-----hHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 438 MMLTE-N-----MFDQAEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 438 l~~~~-~-----~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
..... . .......+.+++.+|++.||.+||++.|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 238 FPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred ccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 00000 0 0112456778999999999999999999975
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-32 Score=270.61 Aligned_cols=226 Identities=14% Similarity=0.206 Sum_probs=176.4
Q ss_pred hcCCCCCceeeecCCeEEEEEEECC-CCEEEEEEecCCCCHHHHHHHHHHHHHHhhcC-CCCccceeeEEecCCeeEEEE
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGILRD-GTRVKIEIYKGDVSREIRDEFVEECKLLVQFQ-HKNLIRVLGWNNSRRTRAIVT 314 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~ 314 (508)
.++|+..+.||+|++|.||+|.+.+ ++.||||.++..........+..|+.++.+.. ||||+++++++......+++|
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~ 93 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICM 93 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEe
Confidence 4678889999999999999999864 89999999975544445566777887777765 999999999999999999999
Q ss_pred eecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCCC--------
Q 045127 315 EWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEYQ-------- 384 (508)
Q Consensus 315 e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~-------- 384 (508)
||++ +++.+++. ...+++..+..++.|++.|++|||+..+++||||+|+||+++.++.+||+|||.+..
T Consensus 94 e~~~-~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~~~ 172 (296)
T cd06618 94 ELMS-TCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKAKT 172 (296)
T ss_pred eccC-cCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECccccchhccCCCccc
Confidence 9985 47777765 457899999999999999999999732999999999999999999999999986421
Q ss_pred ----------------------CCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCc
Q 045127 385 ----------------------HRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTE 442 (508)
Q Consensus 385 ----------------------~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 442 (508)
++.++||||||+++|||++|+.||........ ......... .+.+...
T Consensus 173 ~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~----~~~~~~~~~-----~~~~~~~- 242 (296)
T cd06618 173 RSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFE----VLTKILQEE-----PPSLPPN- 242 (296)
T ss_pred CCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHH----HHHHHhcCC-----CCCCCCC-
Confidence 34578999999999999999999964322111 111111110 0001000
Q ss_pred chHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 443 NMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 443 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
.....++.+++.+||+.||++||++.++++.
T Consensus 243 --~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 243 --EGFSPDFCSFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred --CCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0124567889999999999999999999865
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it |
| >KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-33 Score=282.34 Aligned_cols=219 Identities=15% Similarity=0.181 Sum_probs=181.8
Q ss_pred HHhhcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCC--CHHHHHHHHHHHHHHhhc-CCCCccceeeEEecCCe
Q 045127 234 KAATNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDV--SREIRDEFVEECKLLVQF-QHKNLIRVLGWNNSRRT 309 (508)
Q Consensus 234 ~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 309 (508)
....++|...++||+|.||+|+.+..+ +++.+|||++++.. ..++.+..+.|.+++... +||.++.++..|.+.++
T Consensus 364 ~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~ 443 (694)
T KOG0694|consen 364 PLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEH 443 (694)
T ss_pred cccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCe
Confidence 345578999999999999999999984 58899999998653 334577788899888877 59999999999999999
Q ss_pred eEEEEeecCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC-------
Q 045127 310 RAIVTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE------- 382 (508)
Q Consensus 310 ~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~------- 382 (508)
.|+||||+.||++..+.+...+++..+.-++..|+.||+|||++ |||+||||.+|||+|.+|.+||+|||+.
T Consensus 444 l~fvmey~~Ggdm~~~~~~~~F~e~rarfyaAev~l~L~fLH~~-~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~g 522 (694)
T KOG0694|consen 444 LFFVMEYVAGGDLMHHIHTDVFSEPRARFYAAEVVLGLQFLHEN-GIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQG 522 (694)
T ss_pred EEEEEEecCCCcEEEEEecccccHHHHHHHHHHHHHHHHHHHhc-CceeeecchhheEEcccCcEEecccccccccCCCC
Confidence 99999999999976666678999999999999999999999999 9999999999999999999999999873
Q ss_pred --------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCc
Q 045127 383 --------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTE 442 (508)
Q Consensus 383 --------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 442 (508)
..|+..+|.|||||+||||+.|..||.+...++ +. ..++.... .
T Consensus 523 ~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee--~F-----------dsI~~d~~---~ 586 (694)
T KOG0694|consen 523 DRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEE--VF-----------DSIVNDEV---R 586 (694)
T ss_pred CccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHH--HH-----------HHHhcCCC---C
Confidence 367889999999999999999999998543322 11 11111111 1
Q ss_pred chHHHHHHHHHHHHhcCCCCCCCCCCH
Q 045127 443 NMFDQAEQGLGLGLMCTDQPTGKLPSL 469 (508)
Q Consensus 443 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~ 469 (508)
.......+.+.++.+.+..+|++|-.+
T Consensus 587 yP~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 587 YPRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred CCCcccHHHHHHHHHHhccCcccccCC
Confidence 112346677788889999999999755
|
|
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-32 Score=270.65 Aligned_cols=230 Identities=13% Similarity=0.159 Sum_probs=176.7
Q ss_pred hcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCH-HHHHHHHHHHHHHhhcCCCCccceeeEEecC--CeeEE
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSR-EIRDEFVEECKLLVQFQHKNLIRVLGWNNSR--RTRAI 312 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~l 312 (508)
.++|+..+.||+|+||.||+|... +++.+++|.++..... .....+.+|+.++++++||||+++++++... ...++
T Consensus 4 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~l 83 (293)
T cd07843 4 VDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYM 83 (293)
T ss_pred hhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEE
Confidence 457889999999999999999985 5889999999643322 2234577899999999999999999998876 78999
Q ss_pred EEeecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-------
Q 045127 313 VTEWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------- 383 (508)
Q Consensus 313 v~e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------- 383 (508)
||||+++ +|.+++. ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+|||.+.
T Consensus 84 v~e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~ 161 (293)
T cd07843 84 VMEYVEH-DLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDN-WILHRDLKTSNLLLNNRGILKICDFGLAREYGSPLK 161 (293)
T ss_pred EehhcCc-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeccCCHHHEEECCCCcEEEeecCceeeccCCcc
Confidence 9999974 8988886 34589999999999999999999999 99999999999999999999999997531
Q ss_pred ---------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccc----------hhh-
Q 045127 384 ---------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPE----------NLQ- 431 (508)
Q Consensus 384 ---------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~----------~~~- 431 (508)
..+.++||||||+++|||++|+.||....... .+.... ..... .+.
T Consensus 162 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~ 239 (293)
T cd07843 162 PYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEID-QLNKIF-KLLGTPTEKIWPGFSELPG 239 (293)
T ss_pred ccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHH-HHhCCCchHHHHHhhccch
Confidence 13567999999999999999999997533211 111100 00000 000
Q ss_pred -----------hhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 432 -----------LVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 432 -----------~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
..+...+... .....+.+++.+||+.||++|||+.|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 240 AKKKTFTKYPYNQLRKKFPAL----SLSDNGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred hcccccccccchhhhcccccc----CCChHHHHHHHHHhccCccccCCHHHHhc
Confidence 0000111000 02455778999999999999999999986
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-33 Score=278.87 Aligned_cols=213 Identities=14% Similarity=0.123 Sum_probs=166.2
Q ss_pred eeecCCeEEEEEEE-CCCCEEEEEEecCCC--CHHHHHHHHHHHHHHhhc---CCCCccceeeEEecCCeeEEEEeecCC
Q 045127 246 VGKNEGAAIYKGIL-RDGTRVKIEIYKGDV--SREIRDEFVEECKLLVQF---QHKNLIRVLGWNNSRRTRAIVTEWTNG 319 (508)
Q Consensus 246 lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l---~h~niv~~~~~~~~~~~~~lv~e~~~~ 319 (508)
||+|+||.||+|+. .+++.||+|++.... .......+..|..++... +||||+++++++......++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 69999999999997 468999999985321 112334455677777665 699999999999999999999999999
Q ss_pred CCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC---------------
Q 045127 320 GNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY--------------- 383 (508)
Q Consensus 320 gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~--------------- 383 (508)
|+|.+++. ...+++..+..++.||++||+|||++ ||+||||||+|||++.++.+||+|||++.
T Consensus 81 g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~-~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt 159 (330)
T cd05586 81 GELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKY-DIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTNTFCGT 159 (330)
T ss_pred ChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCccCccCC
Confidence 99998887 66789999999999999999999999 99999999999999999999999998632
Q ss_pred -------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHHHH
Q 045127 384 -------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQAEQ 450 (508)
Q Consensus 384 -------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 450 (508)
.++.++|||||||++|||++|+.||..... .+......... ..+... .....
T Consensus 160 ~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~-----~~~~~~i~~~~------~~~~~~----~~~~~ 224 (330)
T cd05586 160 TEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDT-----QQMYRNIAFGK------VRFPKN----VLSDE 224 (330)
T ss_pred ccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCH-----HHHHHHHHcCC------CCCCCc----cCCHH
Confidence 245679999999999999999999964321 11111111000 011000 11345
Q ss_pred HHHHHHhcCCCCCCCCC----CHHHHHH
Q 045127 451 GLGLGLMCTDQPTGKLP----SLVQIYN 474 (508)
Q Consensus 451 l~~l~~~Cl~~dP~~RP----s~~evl~ 474 (508)
+.+++.+||+.||++|| ++.++++
T Consensus 225 ~~~li~~~L~~~P~~R~~~~~~~~~ll~ 252 (330)
T cd05586 225 GRQFVKGLLNRNPQHRLGAHRDAVELKE 252 (330)
T ss_pred HHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence 56788999999999998 5667665
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-32 Score=274.51 Aligned_cols=226 Identities=16% Similarity=0.163 Sum_probs=185.8
Q ss_pred HhhcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCH--HHHHHHHHHHHHHhhcC-CCCccceeeEEecCCee
Q 045127 235 AATNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSR--EIRDEFVEECKLLVQFQ-HKNLIRVLGWNNSRRTR 310 (508)
Q Consensus 235 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~ 310 (508)
.....|+..+.||+|.||.||+++.+ +|+.+|+|.+...... .....+.+|+.+|+++. ||||+.+.+++++....
T Consensus 32 ~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~ 111 (382)
T KOG0032|consen 32 DIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSV 111 (382)
T ss_pred cccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeE
Confidence 34567888899999999999999985 4999999999654332 24578999999999998 99999999999999999
Q ss_pred EEEEeecCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecC----CCceEEeeccCC----
Q 045127 311 AIVTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTD----NLEPLISRFKIE---- 382 (508)
Q Consensus 311 ~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~----~~~~kl~Dfg~~---- 382 (508)
++|||++.||.|.+.+....+++.++..++.|++.+++|||+. ||+|||+||+|+|+.. ++.+|++|||++
T Consensus 112 ~lvmEL~~GGeLfd~i~~~~~sE~da~~~~~~il~av~~lH~~-gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~ 190 (382)
T KOG0032|consen 112 YLVMELCEGGELFDRIVKKHYSERDAAGIIRQILEAVKYLHSL-GVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIK 190 (382)
T ss_pred EEEEEecCCchHHHHHHHccCCHHHHHHHHHHHHHHHHHHHhC-CceeccCCHHHeeeccccCCCCcEEEeeCCCceEcc
Confidence 9999999999999998744599999999999999999999999 9999999999999973 357999999874
Q ss_pred ----------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcc--
Q 045127 383 ----------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERM-- 438 (508)
Q Consensus 383 ----------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-- 438 (508)
..++..+||||+||++|.|++|..||.......... .+....+
T Consensus 191 ~~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~-------------~i~~~~~~f 257 (382)
T KOG0032|consen 191 PGERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFL-------------AILRGDFDF 257 (382)
T ss_pred CCceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHH-------------HHHcCCCCC
Confidence 356788999999999999999999998654332211 1111111
Q ss_pred cCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 439 MLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 439 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
..... ......+.+++..|+..||.+|+|+.++++.
T Consensus 258 ~~~~w-~~is~~akd~i~~ll~~dp~~R~ta~~~L~H 293 (382)
T KOG0032|consen 258 TSEPW-DDISESAKDFIRKLLEFDPRKRLTAAQALQH 293 (382)
T ss_pred CCCCc-cccCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence 11111 1235567778899999999999999999994
|
|
| >cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-32 Score=262.70 Aligned_cols=221 Identities=14% Similarity=0.184 Sum_probs=177.1
Q ss_pred CCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCC-CHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEee
Q 045127 239 GFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDV-SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEW 316 (508)
Q Consensus 239 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 316 (508)
+|+..+.||+|+||.||+|... +|..+|+|.+.... .....+.+.+|+.++++++|+||+++++.+......++|+||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 4778899999999999999974 58899999986432 223456788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCC-ceEEeeccCC----------
Q 045127 317 TNGGNVELWLS---ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNL-EPLISRFKIE---------- 382 (508)
Q Consensus 317 ~~~gsL~~~l~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~-~~kl~Dfg~~---------- 382 (508)
+++++|.+++. ...+++..+..++.|+++||+|||+. +++|+||||+||++++++ .+|++|||.+
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~-~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~ 159 (257)
T cd08225 81 CDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDR-KILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELA 159 (257)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccccCCHHHEEEcCCCCeEEecccccchhccCCcccc
Confidence 99999999986 23579999999999999999999999 999999999999999875 4699999753
Q ss_pred -----------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchH
Q 045127 383 -----------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMF 445 (508)
Q Consensus 383 -----------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 445 (508)
..++.++||||||+++||+++|..||.... ..+.+........ .+. . .
T Consensus 160 ~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~~~~----~~~---~---~ 224 (257)
T cd08225 160 YTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNN-----LHQLVLKICQGYF----API---S---P 224 (257)
T ss_pred cccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCcc-----HHHHHHHHhcccC----CCC---C---C
Confidence 124567999999999999999999986432 1222222111111 110 0 1
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 446 DQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 446 ~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
.....+.+++.+||+.+|++|||+.|+++.
T Consensus 225 ~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~ 254 (257)
T cd08225 225 NFSRDLRSLISQLFKVSPRDRPSITSILKR 254 (257)
T ss_pred CCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 123467788999999999999999999864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. |
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-32 Score=268.45 Aligned_cols=224 Identities=17% Similarity=0.214 Sum_probs=178.4
Q ss_pred CCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCC--CHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEee
Q 045127 240 FSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDV--SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEW 316 (508)
Q Consensus 240 ~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 316 (508)
|+..+.||+|+||.||+|.. .++..||+|.+.... ..+....+.+|++++++++|||++++++++..+...++||||
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 106 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEY 106 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeC
Confidence 66778999999999999997 468999999986432 233456788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC------------
Q 045127 317 TNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE------------ 382 (508)
Q Consensus 317 ~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~------------ 382 (508)
+++ ++.+.+. ...+++.++..++.|++.|+.|||+. +++||||+|+||+++.++.++|+|||.+
T Consensus 107 ~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~-~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 184 (317)
T cd06635 107 CLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSH-NMIHRDIKAGNILLTEPGQVKLADFGSASIASPANSFVGT 184 (317)
T ss_pred CCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCcccEEECCCCCEEEecCCCccccCCcccccCC
Confidence 975 7777765 56789999999999999999999999 9999999999999999999999999752
Q ss_pred --------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHH
Q 045127 383 --------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQA 448 (508)
Q Consensus 383 --------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 448 (508)
..++.++|||||||++|||++|+.||....... .......... +... .....
T Consensus 185 ~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~-~~~~~~~~~~---------~~~~----~~~~~ 250 (317)
T cd06635 185 PYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-ALYHIAQNES---------PTLQ----SNEWS 250 (317)
T ss_pred ccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHH-HHHHHHhccC---------CCCC----Ccccc
Confidence 235667899999999999999999986432111 0111111000 0000 01224
Q ss_pred HHHHHHHHhcCCCCCCCCCCHHHHHHHHHHH
Q 045127 449 EQGLGLGLMCTDQPTGKLPSLVQIYNMITRA 479 (508)
Q Consensus 449 ~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i 479 (508)
..+.+++.+||+.+|.+||++.++++.+-..
T Consensus 251 ~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~ 281 (317)
T cd06635 251 DYFRNFVDSCLQKIPQDRPTSEELLKHMFVL 281 (317)
T ss_pred HHHHHHHHHHccCCcccCcCHHHHHhChhhh
Confidence 4577899999999999999999999865443
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-32 Score=271.29 Aligned_cols=236 Identities=17% Similarity=0.231 Sum_probs=178.7
Q ss_pred ceeeec--CCeEEEEEEE-CCCCEEEEEEecCCC-CHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEeecCC
Q 045127 244 NLVGKN--EGAAIYKGIL-RDGTRVKIEIYKGDV-SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWTNG 319 (508)
Q Consensus 244 ~~lg~G--~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 319 (508)
..||+| +||+||++.. .+|+.||+|++.... .....+.+.+|+.+++.++||||+++++++..++..++||||+.+
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~ 83 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY 83 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence 456666 9999999997 479999999987443 334457889999999999999999999999999999999999999
Q ss_pred CCHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC--------------
Q 045127 320 GNVELWLS---ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE-------------- 382 (508)
Q Consensus 320 gsL~~~l~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~-------------- 382 (508)
+++.+++. ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.++++||+..
T Consensus 84 ~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~-~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (328)
T cd08226 84 GSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQN-GYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVVY 162 (328)
T ss_pred CCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccccc
Confidence 99999987 34589999999999999999999999 9999999999999999999999998420
Q ss_pred ----------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHH-h--------ccchhh
Q 045127 383 ----------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRM-H--------YPENLQ 431 (508)
Q Consensus 383 ----------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~-~--------~~~~~~ 431 (508)
..++.++|||||||++|||++|+.||........ ....... . .+....
T Consensus 163 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 241 (328)
T cd08226 163 DFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQM-LLQKLKGPPYSPLDITTFPCEES 241 (328)
T ss_pred cccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHH-HHHHhcCCCCCCccccccchhhh
Confidence 1235678999999999999999999975432211 1110000 0 000000
Q ss_pred ------------------------hhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH--HHHHHhh
Q 045127 432 ------------------------LVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM--ITRAYKS 482 (508)
Q Consensus 432 ------------------------~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~--L~~i~~~ 482 (508)
...+..+. ..........+.+++.+||+.||++|||+.|+++. +..+.+.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~~~~ 317 (328)
T cd08226 242 RMKNSQSGVDSGIGESVVAAGMTQTMTSERLR-TPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQVKEQ 317 (328)
T ss_pred hhccchhhhhcccccchhcccccccccccccc-chhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHHHHh
Confidence 00000000 01112345678899999999999999999999854 5555543
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig |
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-32 Score=264.29 Aligned_cols=217 Identities=12% Similarity=0.102 Sum_probs=166.8
Q ss_pred eeeecCCeEEEEEEE-CCCCEEEEEEecCCCCH--HHHHHHHHHHHHHh---hcCCCCccceeeEEecCCeeEEEEeecC
Q 045127 245 LVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSR--EIRDEFVEECKLLV---QFQHKNLIRVLGWNNSRRTRAIVTEWTN 318 (508)
Q Consensus 245 ~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~---~l~h~niv~~~~~~~~~~~~~lv~e~~~ 318 (508)
.||+|+||.||++.. .+++.+|+|.+...... .....+.+|..+++ ..+||+|+.+++++..++..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 489999999999997 46899999998643221 12233444544433 3479999999999998889999999999
Q ss_pred CCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC--------------
Q 045127 319 GGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY-------------- 383 (508)
Q Consensus 319 ~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~-------------- 383 (508)
+|+|.+++. ...+++..+..++.|++.||+|||+. +++||||||+||++++++.++++|||++.
T Consensus 81 ~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~-~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~ 159 (279)
T cd05633 81 GGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNR-FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTH 159 (279)
T ss_pred CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CcCCCCCCHHHEEECCCCCEEEccCCcceeccccCccCcCCCc
Confidence 999999887 56789999999999999999999999 99999999999999999999999998631
Q ss_pred ------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHHHHH
Q 045127 384 ------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQAEQG 451 (508)
Q Consensus 384 ------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l 451 (508)
.++.++|||||||++|||++|+.||......... ....... .....+. ......+
T Consensus 160 ~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~---~~~~~~~-----~~~~~~~-----~~~~~~~ 226 (279)
T cd05633 160 GYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH---EIDRMTL-----TVNVELP-----DSFSPEL 226 (279)
T ss_pred CccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHH---HHHHHhh-----cCCcCCc-----cccCHHH
Confidence 2456789999999999999999999754321111 1111000 0011110 1124566
Q ss_pred HHHHHhcCCCCCCCCC-----CHHHHHHH
Q 045127 452 LGLGLMCTDQPTGKLP-----SLVQIYNM 475 (508)
Q Consensus 452 ~~l~~~Cl~~dP~~RP-----s~~evl~~ 475 (508)
.+++.+|+..||++|| |++|+++.
T Consensus 227 ~~li~~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 227 KSLLEGLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred HHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence 7888999999999999 59998875
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-31 Score=257.45 Aligned_cols=223 Identities=16% Similarity=0.238 Sum_probs=180.8
Q ss_pred CCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCC-HHHHHHHHHHHHHHhhcCCCCccceeeEEecC--CeeEEEE
Q 045127 239 GFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVS-REIRDEFVEECKLLVQFQHKNLIRVLGWNNSR--RTRAIVT 314 (508)
Q Consensus 239 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~lv~ 314 (508)
+|+..+.||+|++|.||+|... +++.|++|++..... ....+.+.+|+..+++++||||+++++.+... ...+++|
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 4777899999999999999985 689999999865432 34567899999999999999999999999988 8899999
Q ss_pred eecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC----------
Q 045127 315 EWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY---------- 383 (508)
Q Consensus 315 e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~---------- 383 (508)
||+++++|.+++. ...+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||.+.
T Consensus 81 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~-~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~ 159 (260)
T cd06606 81 EYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSN-GIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEG 159 (260)
T ss_pred EecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCHHHEEEcCCCCEEEcccccEEeccccccccc
Confidence 9999999999998 44889999999999999999999999 99999999999999999999999997531
Q ss_pred -------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcch
Q 045127 384 -------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENM 444 (508)
Q Consensus 384 -------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 444 (508)
..+.++||||||+++|+|++|..||...... .......... .......
T Consensus 160 ~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~----~~~~~~~~~~-------~~~~~~~-- 226 (260)
T cd06606 160 TGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNP----MAALYKIGSS-------GEPPEIP-- 226 (260)
T ss_pred ccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCch----HHHHHhcccc-------CCCcCCC--
Confidence 1456799999999999999999999754311 1111111000 0000000
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 445 FDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 445 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
......+.+++.+|++.+|++||++.|+++.
T Consensus 227 ~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~ 257 (260)
T cd06606 227 EHLSEEAKDFLRKCLRRDPKKRPTADELLQH 257 (260)
T ss_pred cccCHHHHHHHHHhCcCChhhCCCHHHHhhC
Confidence 1124567888999999999999999999863
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-32 Score=266.80 Aligned_cols=218 Identities=15% Similarity=0.213 Sum_probs=176.9
Q ss_pred CceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEeecCCCC
Q 045127 243 KNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWTNGGN 321 (508)
Q Consensus 243 ~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gs 321 (508)
..+||+|+||.||++.. .+++.||+|.+... .......+.+|+.+++.++|+|++++++++..++..+++|||+++++
T Consensus 25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 103 (292)
T cd06657 25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLR-KQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGA 103 (292)
T ss_pred HHHcCCCCCeEEEEEEEcCCCeEEEEEEeccc-chhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCc
Confidence 36799999999999987 56899999998543 33356778999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC-------------------
Q 045127 322 VELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE------------------- 382 (508)
Q Consensus 322 L~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~------------------- 382 (508)
|.+++....+++..+..++.|++.||+|||+. |++||||+|+||+++.++.++++|||.+
T Consensus 104 L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~-givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y 182 (292)
T cd06657 104 LTDIVTHTRMNEEQIAAVCLAVLKALSVLHAQ-GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYW 182 (292)
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEECCCCCEEEcccccceecccccccccccccCccc
Confidence 99998877889999999999999999999999 9999999999999999999999999853
Q ss_pred --------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHHHHHHHH
Q 045127 383 --------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQAEQGLGL 454 (508)
Q Consensus 383 --------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l 454 (508)
..++.++||||||+++|||++|+.||..... ...........+ +.+... ......+.++
T Consensus 183 ~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~--~~~~~~~~~~~~--------~~~~~~---~~~~~~l~~l 249 (292)
T cd06657 183 MAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP--LKAMKMIRDNLP--------PKLKNL---HKVSPSLKGF 249 (292)
T ss_pred cCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHhhCC--------cccCCc---ccCCHHHHHH
Confidence 1235679999999999999999999864221 111111111111 111110 0123456778
Q ss_pred HHhcCCCCCCCCCCHHHHHHH
Q 045127 455 GLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 455 ~~~Cl~~dP~~RPs~~evl~~ 475 (508)
+.+||+.+|.+||++.++++.
T Consensus 250 i~~~l~~~P~~R~~~~~ll~~ 270 (292)
T cd06657 250 LDRLLVRDPAQRATAAELLKH 270 (292)
T ss_pred HHHHHhCCcccCcCHHHHhcC
Confidence 899999999999999999874
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-32 Score=268.99 Aligned_cols=229 Identities=15% Similarity=0.126 Sum_probs=171.2
Q ss_pred ceeeecCCeEEEEEEECCCCEEEEEEecCC-CCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEeecCCCCH
Q 045127 244 NLVGKNEGAAIYKGILRDGTRVKIEIYKGD-VSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWTNGGNV 322 (508)
Q Consensus 244 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 322 (508)
+.+|.|+++.||++.. +++.||+|++... ......+.+.+|+++++.++||||+++++++...+..+++|||+++|+|
T Consensus 8 ~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l 86 (314)
T cd08216 8 KCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSC 86 (314)
T ss_pred HhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCH
Confidence 3344455555555444 6899999999754 3444667899999999999999999999999999999999999999999
Q ss_pred HHHhc---cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC-----------------
Q 045127 323 ELWLS---ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE----------------- 382 (508)
Q Consensus 323 ~~~l~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~----------------- 382 (508)
.+++. ...+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+|++|||.+
T Consensus 87 ~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~-~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~ 165 (314)
T cd08216 87 EDLLKTHFPEGLPELAIAFILKDVLNALDYIHSK-GFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFP 165 (314)
T ss_pred HHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCcceEEEecCCceEEecCccceeecccccccccccccc
Confidence 99987 35688999999999999999999999 9999999999999999999999999642
Q ss_pred -------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccch------------hh
Q 045127 383 -------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPEN------------LQ 431 (508)
Q Consensus 383 -------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~------------~~ 431 (508)
..++.++|||||||++|||++|+.||........ ..+......+.. ..
T Consensus 166 ~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (314)
T cd08216 166 KSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQM-LLEKVRGTVPCLLDKSTYPLYEDSMS 244 (314)
T ss_pred ccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHhccCccccccCchhhhcCCcC
Confidence 1245689999999999999999999975432211 111111111000 00
Q ss_pred h----hhhhcc---cCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 432 L----VVDERM---MLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 432 ~----~~~~~l---~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
. ..++.. ............+.+++.+||+.||++|||++++++.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 295 (314)
T cd08216 245 QSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNH 295 (314)
T ss_pred cccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcC
Confidence 0 000000 0000011224567889999999999999999999875
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc |
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-32 Score=257.78 Aligned_cols=222 Identities=19% Similarity=0.278 Sum_probs=180.5
Q ss_pred CCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEeec
Q 045127 239 GFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWT 317 (508)
Q Consensus 239 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 317 (508)
+|+..+.||+|++|.||++... +++.+++|++..... .....+.+|++.+++++|++++++++++......++++||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~ 79 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK-EKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFC 79 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch-hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecC
Confidence 4778899999999999999985 689999999965543 35678999999999999999999999999999999999999
Q ss_pred CCCCHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCCC-----------
Q 045127 318 NGGNVELWLSE--SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEYQ----------- 384 (508)
Q Consensus 318 ~~gsL~~~l~~--~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~----------- 384 (508)
++++|.+++.. ..+++..+..++.|++.||+|||+. +++||||+|+||++++++.++|+|||.+..
T Consensus 80 ~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~-~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~ 158 (253)
T cd05122 80 SGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSN-GIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNTMV 158 (253)
T ss_pred CCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcC-CEecCCCCHHHEEEccCCeEEEeecccccccccccccccee
Confidence 99999999874 4889999999999999999999999 999999999999999999999999986422
Q ss_pred ---------------CCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHHH
Q 045127 385 ---------------HRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQAE 449 (508)
Q Consensus 385 ---------------~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 449 (508)
.+.++||||||+++|+|++|+.||........ ...... .... .+. .......
T Consensus 159 ~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~--~~~~~~---~~~~-----~~~---~~~~~~~ 225 (253)
T cd05122 159 GTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKA--LFKIAT---NGPP-----GLR---NPEKWSD 225 (253)
T ss_pred cCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHH--HHHHHh---cCCC-----CcC---cccccCH
Confidence 25679999999999999999999875321110 000000 0000 000 0011135
Q ss_pred HHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 450 QGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 450 ~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
.+.+++.+||+.||++|||+.|+++.
T Consensus 226 ~~~~~i~~~l~~~p~~R~t~~~~l~~ 251 (253)
T cd05122 226 EFKDFLKKCLQKNPEKRPTAEQLLKH 251 (253)
T ss_pred HHHHHHHHHccCChhhCCCHHHHhcC
Confidence 67889999999999999999999863
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-32 Score=268.46 Aligned_cols=239 Identities=12% Similarity=0.137 Sum_probs=175.3
Q ss_pred HhhcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCH-HHHHHHHHHHHHHhhcCCCCccceeeEEecCC----
Q 045127 235 AATNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSR-EIRDEFVEECKLLVQFQHKNLIRVLGWNNSRR---- 308 (508)
Q Consensus 235 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~---- 308 (508)
...++|+..+.||+|+||.||+|... +++.||+|.+...... .....+.+|+.++++++||||+++++++....
T Consensus 9 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 88 (310)
T cd07865 9 DEVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYN 88 (310)
T ss_pred chhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEeccccccc
Confidence 34567999999999999999999974 6899999998643222 22345678999999999999999999887543
Q ss_pred ----eeEEEEeecCCCCHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC
Q 045127 309 ----TRAIVTEWTNGGNVELWLSE--SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE 382 (508)
Q Consensus 309 ----~~~lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~ 382 (508)
..++||||+.+ +|.+++.. ..+++.++..++.|++.||+|||++ |++|+||||+||+++.++.+||+|||.+
T Consensus 89 ~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~i~H~dl~p~nil~~~~~~~kl~dfg~~ 166 (310)
T cd07865 89 RYKGSFYLVFEFCEH-DLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRN-KILHRDMKAANILITKDGILKLADFGLA 166 (310)
T ss_pred CCCceEEEEEcCCCc-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHHEEECCCCcEEECcCCCc
Confidence 45999999964 88887763 3689999999999999999999999 9999999999999999999999999853
Q ss_pred C--------------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCc-ccHHHHHHHhccch
Q 045127 383 Y--------------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGE-AGFIEYIRMHYPEN 429 (508)
Q Consensus 383 ~--------------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~-~~~~~~~~~~~~~~ 429 (508)
. .++.++||||||+++|||++|+.||....... ......+....+..
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (310)
T cd07865 167 RAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPE 246 (310)
T ss_pred ccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChh
Confidence 1 13457999999999999999999986433211 00111111111110
Q ss_pred h-hh-----hhhh-cccCCc--c------hHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 430 L-QL-----VVDE-RMMLTE--N------MFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 430 ~-~~-----~~~~-~l~~~~--~------~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
. .. ..+. ...... . .......+.+++.+||..||++|||++|+++.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h 307 (310)
T cd07865 247 VWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNH 307 (310)
T ss_pred hcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcC
Confidence 0 00 0000 000000 0 00013456789999999999999999999853
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >KOG0584 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-33 Score=280.18 Aligned_cols=219 Identities=20% Similarity=0.242 Sum_probs=177.6
Q ss_pred CceeeecCCeEEEEEEE-CCCCEEEE---EEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCe--eEEEEee
Q 045127 243 KNLVGKNEGAAIYKGIL-RDGTRVKI---EIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRT--RAIVTEW 316 (508)
Q Consensus 243 ~~~lg~G~~g~V~~~~~-~~~~~vav---K~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~--~~lv~e~ 316 (508)
..+||+|+|-+||+|.+ .+|..||- |.-.-...+...++|..|+.+|+.|+||||++++.++.+... .-+|+|.
T Consensus 45 ~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL 124 (632)
T KOG0584|consen 45 DEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITEL 124 (632)
T ss_pred hhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeec
Confidence 47899999999999997 35777764 332233455567899999999999999999999999987554 7889999
Q ss_pred cCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCC-CccccCCCCCCEEecC-CCceEEeeccCC-----------
Q 045127 317 TNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQW-PEVDYDLRTGSVLLTD-NLEPLISRFKIE----------- 382 (508)
Q Consensus 317 ~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~-~iiH~Dlkp~NIll~~-~~~~kl~Dfg~~----------- 382 (508)
+..|+|..|.+ .+.++......|++||++||.|||++. +|||||||-+||||+. .|.+||+|+|++
T Consensus 125 ~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~aksv 204 (632)
T KOG0584|consen 125 FTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSHAKSV 204 (632)
T ss_pred ccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhcccccee
Confidence 99999999998 678899999999999999999999987 8999999999999985 589999999984
Q ss_pred -------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHHH
Q 045127 383 -------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQAE 449 (508)
Q Consensus 383 -------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 449 (508)
..|....||||||++|+||+|+..||....+...-+.+.....-|..+..+-||
T Consensus 205 IGTPEFMAPEmYEE~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~sl~kV~dP------------- 271 (632)
T KOG0584|consen 205 IGTPEFMAPEMYEENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAALSKVKDP------------- 271 (632)
T ss_pred ccCccccChHHHhhhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHHhhccCCH-------------
Confidence 256788999999999999999999998665443322222222222234444344
Q ss_pred HHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 450 QGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 450 ~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
++.+++.+|+.. .++|||+.|+++.
T Consensus 272 evr~fIekCl~~-~~~R~sa~eLL~d 296 (632)
T KOG0584|consen 272 EVREFIEKCLAT-KSERLSAKELLKD 296 (632)
T ss_pred HHHHHHHHHhcC-chhccCHHHHhhC
Confidence 355788899999 9999999999874
|
|
| >KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-32 Score=268.31 Aligned_cols=223 Identities=15% Similarity=0.220 Sum_probs=187.7
Q ss_pred hhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCH-HHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEE
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSR-EIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIV 313 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 313 (508)
+.+=|...+.||+|.|+.|-.|++ -+|+.||||++.+.... .....+.+|++.|+-++|||||++|.+..++...|+|
T Consensus 16 IAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLi 95 (864)
T KOG4717|consen 16 IAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLI 95 (864)
T ss_pred eeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEE
Confidence 456678889999999999999986 57999999999755433 3467789999999999999999999999999999999
Q ss_pred EeecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEec-CCCceEEeeccCCCCC-----
Q 045127 314 TEWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLT-DNLEPLISRFKIEYQH----- 385 (508)
Q Consensus 314 ~e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~-~~~~~kl~Dfg~~~~~----- 385 (508)
+|.-.+|+|.+|+- +..+.+....+++.||+.|+.|+|+. .+|||||||+||++- .-|-+|+.|||++..+
T Consensus 96 LELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqL-HVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~k 174 (864)
T KOG4717|consen 96 LELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQL-HVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKK 174 (864)
T ss_pred EEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhh-hhhcccCCcceeEEeeecCceEeeeccccccCCCcch
Confidence 99999999999986 77899999999999999999999999 999999999999875 6789999999985322
Q ss_pred ----------------------CCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcc
Q 045127 386 ----------------------RSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTEN 443 (508)
Q Consensus 386 ----------------------~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 443 (508)
.++.||||+|||||.|++|+.||+...+.+ .+..++|-....+
T Consensus 175 L~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSE-------------TLTmImDCKYtvP-- 239 (864)
T KOG4717|consen 175 LTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSE-------------TLTMIMDCKYTVP-- 239 (864)
T ss_pred hhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchh-------------hhhhhhcccccCc--
Confidence 357899999999999999999998654332 2333444333222
Q ss_pred hHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 444 MFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 444 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
.....++.+++..|+..||.+|.+.+||...
T Consensus 240 -shvS~eCrdLI~sMLvRdPkkRAslEeI~s~ 270 (864)
T KOG4717|consen 240 -SHVSKECRDLIQSMLVRDPKKRASLEEIVST 270 (864)
T ss_pred -hhhhHHHHHHHHHHHhcCchhhccHHHHhcc
Confidence 2346778889999999999999999999853
|
|
| >KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-32 Score=279.29 Aligned_cols=170 Identities=21% Similarity=0.239 Sum_probs=150.1
Q ss_pred CCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcC-C-----CCccceeeEEecCCeeE
Q 045127 239 GFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQ-H-----KNLIRVLGWNNSRRTRA 311 (508)
Q Consensus 239 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h-----~niv~~~~~~~~~~~~~ 311 (508)
+|.+.+.||+|+||.|.+|.. .+++.||||+++.... ...+-..|+.+|..++ | -|+|+++++|...++.|
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~--f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlc 264 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKR--FLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLC 264 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccChH--HHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccccccee
Confidence 789999999999999999996 5699999999975433 4567788999999996 4 47999999999999999
Q ss_pred EEEeecCCCCHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecC--CCceEEeeccCC----
Q 045127 312 IVTEWTNGGNVELWLS---ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTD--NLEPLISRFKIE---- 382 (508)
Q Consensus 312 lv~e~~~~gsL~~~l~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~--~~~~kl~Dfg~~---- 382 (508)
||+|.+. -+|.++++ ..+++...+..++.||+.||.+||+. +|||+||||+|||+.+ ...+||+|||.+
T Consensus 265 iVfELL~-~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l-~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~ 342 (586)
T KOG0667|consen 265 IVFELLS-TNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHEL-GIIHCDLKPENILLKDPKRSRIKVIDFGSSCFES 342 (586)
T ss_pred eeehhhh-hhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeeccCChhheeeccCCcCceeEEecccccccC
Confidence 9999995 49999998 45689999999999999999999999 9999999999999974 347999999974
Q ss_pred --------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccc
Q 045127 383 --------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFE 412 (508)
Q Consensus 383 --------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~ 412 (508)
.+|+.+.||||||||+.||++|.+.|.+..
T Consensus 343 q~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~n 392 (586)
T KOG0667|consen 343 QRVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDN 392 (586)
T ss_pred CcceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCC
Confidence 467889999999999999999988776543
|
|
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-32 Score=263.54 Aligned_cols=232 Identities=16% Similarity=0.200 Sum_probs=176.2
Q ss_pred CCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCH-HHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEeec
Q 045127 240 FSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSR-EIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWT 317 (508)
Q Consensus 240 ~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 317 (508)
|+..+.||.|++|.||+|.. .+|..||+|++...... .....+.+|++++++++|||++++++++..+...+++|||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 56789999999999999997 47999999998644322 23456889999999999999999999999999999999999
Q ss_pred CCCCHHHHhccC---CCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-----------
Q 045127 318 NGGNVELWLSES---APSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY----------- 383 (508)
Q Consensus 318 ~~gsL~~~l~~~---~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~----------- 383 (508)
+ ++|.+++... .+++..+..++.|+++||+|||+. +++||||+|+||+++.++.++|+|||.+.
T Consensus 81 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~-~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~ 158 (283)
T cd07835 81 D-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSH-RVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTYTH 158 (283)
T ss_pred C-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeCCCCCHHHEEEcCCCcEEEeecccccccCCCccccCc
Confidence 5 6899988732 589999999999999999999999 99999999999999999999999997631
Q ss_pred -----------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhc-cch--------hhhhhhhc
Q 045127 384 -----------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHY-PEN--------LQLVVDER 437 (508)
Q Consensus 384 -----------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~-~~~--------~~~~~~~~ 437 (508)
.++.++||||||+++|+|++|+.||....... .+........ +.. ..+.....
T Consensus 159 ~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (283)
T cd07835 159 EVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEID-QLFRIFRTLGTPDEDVWPGVTSLPDYKPTF 237 (283)
T ss_pred cccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCChHHhhhhhhchhhhhhc
Confidence 12457999999999999999999996432211 1111111100 000 00000000
Q ss_pred ccCC-cc----hHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 438 MMLT-EN----MFDQAEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 438 l~~~-~~----~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
.... .. .......+.+++.+|++.||++|||++|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 238 PKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred ccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 0000 00 0011356778999999999999999999985
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-32 Score=271.32 Aligned_cols=235 Identities=13% Similarity=0.183 Sum_probs=179.1
Q ss_pred hcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCC-HHHHHHHHHHHHHHhhcCCCCccceeeEEec----CCee
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVS-REIRDEFVEECKLLVQFQHKNLIRVLGWNNS----RRTR 310 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~----~~~~ 310 (508)
.++|+..+.||+|++|.||+|.. .+|+.||+|++..... ....+.+.+|+.++++++||||+++++++.. ....
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 36889999999999999999997 4689999999865432 2345677889999999999999999998763 3467
Q ss_pred EEEEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC------
Q 045127 311 AIVTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------ 383 (508)
Q Consensus 311 ~lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------ 383 (508)
++||||+. ++|.+++. ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||.+.
T Consensus 84 ~lv~e~~~-~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 161 (334)
T cd07855 84 YVVMDLME-SDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSA-NVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSP 161 (334)
T ss_pred EEEEehhh-hhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEEcCCCcEEecccccceeecccC
Confidence 99999995 68999886 56689999999999999999999999 99999999999999999999999998631
Q ss_pred --------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhcc----------
Q 045127 384 --------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYP---------- 427 (508)
Q Consensus 384 --------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~---------- 427 (508)
.++.++|||||||++|||++|+.||....... ....+.....
T Consensus 162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~--~~~~~~~~~g~~~~~~~~~~ 239 (334)
T cd07855 162 TEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVH--QLKLILSVLGSPSEEVLNRI 239 (334)
T ss_pred cCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHH--HHHHHHHHhCCChhHhhhhh
Confidence 24567999999999999999999997532111 1111111000
Q ss_pred --chhhhhhhhcccCCcc-----hHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 428 --ENLQLVVDERMMLTEN-----MFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 428 --~~~~~~~~~~l~~~~~-----~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
+......+..-..... .......+.+++.+||+.+|++|||++++++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 294 (334)
T cd07855 240 GSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQH 294 (334)
T ss_pred chhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 0011111100000000 01125678899999999999999999999875
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the |
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-31 Score=266.00 Aligned_cols=223 Identities=17% Similarity=0.203 Sum_probs=176.8
Q ss_pred CCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCC--CCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEe
Q 045127 239 GFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGD--VSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTE 315 (508)
Q Consensus 239 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 315 (508)
.|+..+.||+|++|.||+|.. .+++.+|+|.+... .......++.+|+++++.++|+|++++.+++......++|||
T Consensus 16 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 95 (308)
T cd06634 16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME 95 (308)
T ss_pred HHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEE
Confidence 366678899999999999997 46789999998632 233345678899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC----------
Q 045127 316 WTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY---------- 383 (508)
Q Consensus 316 ~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~---------- 383 (508)
|+. |++.+.+. ...+++.++..++.|++.|+.|||+. +++||||||+||+++.++.++++|||.+.
T Consensus 96 ~~~-~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~-~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 173 (308)
T cd06634 96 YCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH-NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVG 173 (308)
T ss_pred ccC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHhEEECCCCcEEECCcccceeecCcccccC
Confidence 996 57877764 55689999999999999999999999 99999999999999999999999998632
Q ss_pred ----------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHH
Q 045127 384 ----------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQ 447 (508)
Q Consensus 384 ----------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 447 (508)
.++.++|||||||++|||++|+.||....... ......... .+... ....
T Consensus 174 ~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-~~~~~~~~~---------~~~~~----~~~~ 239 (308)
T cd06634 174 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-ALYHIAQNE---------SPALQ----SGHW 239 (308)
T ss_pred CccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHH-HHHHHhhcC---------CCCcC----cccc
Confidence 34568999999999999999999986432111 001011000 01000 0122
Q ss_pred HHHHHHHHHhcCCCCCCCCCCHHHHHHHHH
Q 045127 448 AEQGLGLGLMCTDQPTGKLPSLVQIYNMIT 477 (508)
Q Consensus 448 ~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~ 477 (508)
...+.+++.+||+.+|++||++.++++...
T Consensus 240 ~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~ 269 (308)
T cd06634 240 SEYFRNFVDSCLQKIPQDRPTSEVLLKHRF 269 (308)
T ss_pred cHHHHHHHHHHhhCCcccCCCHHHHhhCcc
Confidence 455778999999999999999999997643
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-31 Score=257.94 Aligned_cols=221 Identities=18% Similarity=0.150 Sum_probs=180.4
Q ss_pred CCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCC-CHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEee
Q 045127 239 GFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDV-SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEW 316 (508)
Q Consensus 239 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 316 (508)
+|+..+.||+|++|.||++.. .+++.+++|.+.... .......+.+|++++++++|+||+++++++......++||||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 477889999999999999986 468899999986432 334567788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC---------
Q 045127 317 TNGGNVELWLSE-----SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE--------- 382 (508)
Q Consensus 317 ~~~gsL~~~l~~-----~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~--------- 382 (508)
+++++|.+++.. ..+++..+..++.|++.||+|||+. |++|+||+|+||+++.++.+|++|||.+
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~-~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~ 159 (256)
T cd08530 81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQ-KILHRDLKSANILLVANDLVKIGDLGISKVLKKNMAK 159 (256)
T ss_pred cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC-CcccCCCCcceEEEecCCcEEEeeccchhhhccCCcc
Confidence 999999999863 6789999999999999999999999 9999999999999999999999999853
Q ss_pred ----------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHH
Q 045127 383 ----------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFD 446 (508)
Q Consensus 383 ----------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 446 (508)
..++.++|+||||+++|||++|+.||...... .+...+.. ..... ....
T Consensus 160 ~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~--~~~~~~~~-----------~~~~~--~~~~ 224 (256)
T cd08530 160 TQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQ--DLRYKVQR-----------GKYPP--IPPI 224 (256)
T ss_pred cccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHhc-----------CCCCC--Cchh
Confidence 22356899999999999999999999743211 11111110 00000 0012
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 447 QAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 447 ~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
....+.+++.+|++.+|++||++.|+++.
T Consensus 225 ~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 253 (256)
T cd08530 225 YSQDLQNFIRSMLQVKPKLRPNCDKILAS 253 (256)
T ss_pred hCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 34567889999999999999999999864
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an |
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-31 Score=268.58 Aligned_cols=246 Identities=13% Similarity=0.181 Sum_probs=184.3
Q ss_pred HHHhhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCC-CHHHHHHHHHHHHHHhhcCCCCccceeeEEecCC--
Q 045127 233 LKAATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDV-SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRR-- 308 (508)
Q Consensus 233 l~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-- 308 (508)
+....++|+..+.||+|+||.||+|.. .++..||||.+.... .......+.+|+.++++++||||+++++++....
T Consensus 10 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 89 (343)
T cd07880 10 IWEVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSL 89 (343)
T ss_pred hhccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccc
Confidence 445678899999999999999999986 578999999986432 2234567889999999999999999999887543
Q ss_pred ----eeEEEEeecCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-
Q 045127 309 ----TRAIVTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY- 383 (508)
Q Consensus 309 ----~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~- 383 (508)
..++||||+ +++|.+++....+++..+..++.|+++||+|||+. ||+||||||+||+++.++.++++|||.+.
T Consensus 90 ~~~~~~~lv~e~~-~~~l~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~-gi~H~dlkp~Nill~~~~~~kl~dfg~~~~ 167 (343)
T cd07880 90 DRFHDFYLVMPFM-GTDLGKLMKHEKLSEDRIQFLVYQMLKGLKYIHAA-GIIHRDLKPGNLAVNEDCELKILDFGLARQ 167 (343)
T ss_pred cccceEEEEEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEcCCCCEEEeecccccc
Confidence 458999998 77999998878899999999999999999999999 99999999999999999999999998642
Q ss_pred ------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHH-----------hccc
Q 045127 384 ------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRM-----------HYPE 428 (508)
Q Consensus 384 ------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~-----------~~~~ 428 (508)
.++.++||||||+++|++++|+.||....... .+...... ....
T Consensus 168 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 246 (343)
T cd07880 168 TDSEMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLD-QLMEIMKVTGTPSKEFVQKLQSE 246 (343)
T ss_pred cccCccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcCCCCHHHHHhhcch
Confidence 24567899999999999999999997432111 11111110 0000
Q ss_pred hhhhhhhhcccCCcc-----hHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH--HHHHHHh
Q 045127 429 NLQLVVDERMMLTEN-----MFDQAEQGLGLGLMCTDQPTGKLPSLVQIYN--MITRAYK 481 (508)
Q Consensus 429 ~~~~~~~~~l~~~~~-----~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~--~L~~i~~ 481 (508)
............... .......+.+++.+|++.||++|||+.++++ .++....
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~~~ 306 (343)
T cd07880 247 DAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEFHD 306 (343)
T ss_pred hHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhhcC
Confidence 000000000000000 0012345778999999999999999999994 3554433
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-32 Score=272.46 Aligned_cols=237 Identities=13% Similarity=0.104 Sum_probs=178.0
Q ss_pred HhhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCC-CHHHHHHHHHHHHHHhhcCCCCccceeeEEecC-----
Q 045127 235 AATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDV-SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSR----- 307 (508)
Q Consensus 235 ~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~----- 307 (508)
...++|+..+.||+|+||.||+|.. .+++.||+|.+.... .......+.+|+.++++++||||+++++++...
T Consensus 13 ~~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 92 (353)
T cd07850 13 TVLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEE 92 (353)
T ss_pred hhhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccc
Confidence 3567899999999999999999997 468999999986432 233456778899999999999999999988643
Q ss_pred -CeeEEEEeecCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC---
Q 045127 308 -RTRAIVTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY--- 383 (508)
Q Consensus 308 -~~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~--- 383 (508)
...++||||+. ++|.+.+... ++...+..++.|++.||+|||+. |++||||||+||+++.++.+||+|||.+.
T Consensus 93 ~~~~~lv~e~~~-~~l~~~~~~~-l~~~~~~~~~~ql~~aL~~LH~~-gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~ 169 (353)
T cd07850 93 FQDVYLVMELMD-ANLCQVIQMD-LDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 169 (353)
T ss_pred cCcEEEEEeccC-CCHHHHHhhc-CCHHHHHHHHHHHHHHHHHHHhC-CeeeCCCCHHHEEECCCCCEEEccCccceeCC
Confidence 34699999996 5888887644 89999999999999999999999 99999999999999999999999998742
Q ss_pred -----------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhc--cchhh-------
Q 045127 384 -----------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHY--PENLQ------- 431 (508)
Q Consensus 384 -----------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~--~~~~~------- 431 (508)
.++.++|||||||++|+|++|+.||....... .......... +..+.
T Consensus 170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 248 (353)
T cd07850 170 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHID-QWNKIIEQLGTPSDEFMSRLQPTV 248 (353)
T ss_pred CCCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHH-HHHHHHHhcCCCCHHHHHHhhhhh
Confidence 24567899999999999999999996432110 0100000000 00000
Q ss_pred ----------------hhhhhcccCC---cchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 432 ----------------LVVDERMMLT---ENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 432 ----------------~~~~~~l~~~---~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
+......... .........+.+++.+|++.||++|||+.|+++.
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~ 311 (353)
T cd07850 249 RNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH 311 (353)
T ss_pred hHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0000000000 0001224567899999999999999999999965
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=8e-34 Score=261.23 Aligned_cols=219 Identities=16% Similarity=0.237 Sum_probs=184.4
Q ss_pred CCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEeecC
Q 045127 240 FSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWTN 318 (508)
Q Consensus 240 ~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 318 (508)
|.+..+||+|+||.||+|.+ ..|+.+|||.+.-+. ..+++..|+.+|.+++.|++|++||.|......+||||||-
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~s---DLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCG 111 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDT---DLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCG 111 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccc---hHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcC
Confidence 55668999999999999997 469999999985332 56889999999999999999999999988889999999999
Q ss_pred CCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCCC------------
Q 045127 319 GGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEYQ------------ 384 (508)
Q Consensus 319 ~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~------------ 384 (508)
.|+..+.++ .+++++.++..++.+.++||+|||.. .-+|||||..|||++.+|.+|++|||.+++
T Consensus 112 AGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~-~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKRNTVI 190 (502)
T KOG0574|consen 112 AGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDL-KKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKRNTVI 190 (502)
T ss_pred CCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHH-HHHHhhcccccEEEcccchhhhhhccccchhhhhHHhhCccc
Confidence 999999998 78899999999999999999999999 999999999999999999999999998643
Q ss_pred ---------------CCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHHH
Q 045127 385 ---------------HRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQAE 449 (508)
Q Consensus 385 ---------------~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 449 (508)
|..++||||+|++..||.-|++||.+.+.....+ .++.+ -.|.+ ........
T Consensus 191 GTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIF------MIPT~----PPPTF---~KPE~WS~ 257 (502)
T KOG0574|consen 191 GTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIF------MIPTK----PPPTF---KKPEEWSS 257 (502)
T ss_pred cCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeE------eccCC----CCCCC---CChHhhhh
Confidence 4578999999999999999999998765433211 01111 01111 12234567
Q ss_pred HHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 450 QGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 450 ~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
.+-+++..|+-..|++|.|+-++++.
T Consensus 258 ~F~DFi~~CLiK~PE~R~TA~~L~~H 283 (502)
T KOG0574|consen 258 EFNDFIRSCLIKKPEERKTALRLCEH 283 (502)
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence 78899999999999999999887753
|
|
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=8.4e-32 Score=265.36 Aligned_cols=235 Identities=13% Similarity=0.163 Sum_probs=174.5
Q ss_pred cCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCH-HHHHHHHHHHHHHhhcC-CCCccceeeEEecCCe-----
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSR-EIRDEFVEECKLLVQFQ-HKNLIRVLGWNNSRRT----- 309 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~----- 309 (508)
++|+..+.||+|+||.||+|... +++.||+|..+..... .....+.+|+.++++++ ||||+++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 46888999999999999999974 6899999998643322 23457888999999995 6999999998876555
Q ss_pred eEEEEeecCCCCHHHHhc------cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecC-CCceEEeeccCC
Q 045127 310 RAIVTEWTNGGNVELWLS------ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTD-NLEPLISRFKIE 382 (508)
Q Consensus 310 ~~lv~e~~~~gsL~~~l~------~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~-~~~~kl~Dfg~~ 382 (508)
.|+||||+++ +|.+++. ...+++..+..++.||+.||+|||++ +++||||||+||+++. ++.+||+|||.+
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~-~i~H~dl~~~nil~~~~~~~~kl~dfg~~ 158 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKH-GVMHRDLKPQNLLVDKQKGLLKIADLGLG 158 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCChHHEEEecCCCeEEEeecccc
Confidence 7999999985 8888875 23579999999999999999999999 9999999999999998 899999999863
Q ss_pred C----------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhc-cch--hh
Q 045127 383 Y----------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHY-PEN--LQ 431 (508)
Q Consensus 383 ~----------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~-~~~--~~ 431 (508)
. .++.++||||||+++|+|++|..||....... .......... +.. ..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 237 (295)
T cd07837 159 RAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQ-QLLHIFKLLGTPTEQVWP 237 (295)
T ss_pred eecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHH-HHHHHHHHhCCCChhhCc
Confidence 2 23567999999999999999999997432111 1111111000 000 00
Q ss_pred hhh---h----hcccCC---cchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 432 LVV---D----ERMMLT---ENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 432 ~~~---~----~~l~~~---~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
... + +..... .........+.+++.+||+.||++||++.|++..
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~ 291 (295)
T cd07837 238 GVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTH 291 (295)
T ss_pred chhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 000 0 000000 0001124567889999999999999999998753
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.5e-31 Score=258.92 Aligned_cols=216 Identities=14% Similarity=0.136 Sum_probs=173.3
Q ss_pred eeecCCeEEEEEEEC-CCCEEEEEEecCCCC--HHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEeecCCCCH
Q 045127 246 VGKNEGAAIYKGILR-DGTRVKIEIYKGDVS--REIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWTNGGNV 322 (508)
Q Consensus 246 lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 322 (508)
||.|++|.||+|... +++.+|+|++..... ....+.+.+|+.+++.++||||+++++++.++...+++|||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 689999999999974 589999999864332 23457899999999999999999999999999999999999999999
Q ss_pred HHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC------------------
Q 045127 323 ELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------------------ 383 (508)
Q Consensus 323 ~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------------------ 383 (508)
.+++. ...+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++++|||.+.
T Consensus 81 ~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~-~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~ 159 (262)
T cd05572 81 WTILRDRGLFDEYTARFYIACVVLAFEYLHNR-GIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWTFCGTPEYV 159 (262)
T ss_pred HHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC-CcccCCCCHHHEEEcCCCCEEEeeCCcccccCcccccccccCCcCcc
Confidence 99997 45689999999999999999999999 99999999999999999999999998732
Q ss_pred --------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHHHHHHHHH
Q 045127 384 --------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQAEQGLGLG 455 (508)
Q Consensus 384 --------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~ 455 (508)
.++.++|+||||+++|+|++|..||.....+. .......... ........ .....+.+++
T Consensus 160 ~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~~~~~~~~~~------~~~~~~~~---~~~~~~~~~i 227 (262)
T cd05572 160 APEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDP---MEIYNDILKG------NGKLEFPN---YIDKAAKDLI 227 (262)
T ss_pred ChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCH---HHHHHHHhcc------CCCCCCCc---ccCHHHHHHH
Confidence 23456899999999999999999997543211 1111111000 00010011 1145678899
Q ss_pred HhcCCCCCCCCCC-----HHHHHH
Q 045127 456 LMCTDQPTGKLPS-----LVQIYN 474 (508)
Q Consensus 456 ~~Cl~~dP~~RPs-----~~evl~ 474 (508)
.+||+.+|++||+ +.|+++
T Consensus 228 ~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 228 KQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred HHHccCChhhCcCCcccCHHHHhc
Confidence 9999999999999 677665
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.1e-31 Score=269.90 Aligned_cols=237 Identities=13% Similarity=0.155 Sum_probs=178.9
Q ss_pred hhcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCC-CHHHHHHHHHHHHHHhhc-CCCCccceeeEEecC--Cee
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDV-SREIRDEFVEECKLLVQF-QHKNLIRVLGWNNSR--RTR 310 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~--~~~ 310 (508)
..++|+..+.||+|+||.||+|... +++.+|+|.+.... .......+.+|+.+++++ +||||+++++++... ...
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 84 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI 84 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence 4578889999999999999999974 68899999885432 223455678899999999 999999999988643 467
Q ss_pred EEEEeecCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-------
Q 045127 311 AIVTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------- 383 (508)
Q Consensus 311 ~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------- 383 (508)
++||||++ ++|..++....+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||.+.
T Consensus 85 ~lv~e~~~-~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~-~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~ 162 (337)
T cd07852 85 YLVFEYME-TDLHAVIRANILEDVHKRYIMYQLLKALKYIHSG-NVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEE 162 (337)
T ss_pred EEEecccc-cCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEEcCCCcEEEeeccchhccccccc
Confidence 99999997 5999998866889999999999999999999999 99999999999999999999999998642
Q ss_pred --------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHh--ccch------
Q 045127 384 --------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMH--YPEN------ 429 (508)
Q Consensus 384 --------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~--~~~~------ 429 (508)
..+.++||||||+++|+|++|+.||........ ........ ....
T Consensus 163 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 241 (337)
T cd07852 163 NPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQ-LEKIIEVIGPPSAEDIESIK 241 (337)
T ss_pred cccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHhCCCCHHHHHHHH
Confidence 134578999999999999999999964332111 11100000 0000
Q ss_pred ---hhhhhhhcccCC-----cchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 430 ---LQLVVDERMMLT-----ENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 430 ---~~~~~~~~l~~~-----~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
....++...... .........+.+++.+||+.||++|||+.++++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 242 SPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred hhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 000111000000 0000124567889999999999999999999975
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul |
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=1e-31 Score=263.19 Aligned_cols=232 Identities=15% Similarity=0.155 Sum_probs=176.6
Q ss_pred CCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCC-CHHHHHHHHHHHHHHhhcCCCCccceeeEEecC--CeeEEEEe
Q 045127 240 FSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDV-SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSR--RTRAIVTE 315 (508)
Q Consensus 240 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~lv~e 315 (508)
|+..+.||+|++|.||+|... +++.+|+|.+.... .......+.+|++++++++|||++++++++... ...++|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 567789999999999999975 58899999997553 223456788999999999999999999999887 78999999
Q ss_pred ecCCCCHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC----------
Q 045127 316 WTNGGNVELWLSE--SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY---------- 383 (508)
Q Consensus 316 ~~~~gsL~~~l~~--~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~---------- 383 (508)
|+++ +|.+++.. ..+++..+..++.|+++||+|||+. +++|+||||+||++++++.+|++|||.+.
T Consensus 81 ~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~-~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~~~ 158 (287)
T cd07840 81 YMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSN-GILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADY 158 (287)
T ss_pred cccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCcHHHeEEcCCCCEEEccccceeeccCCCcccc
Confidence 9975 89888873 4789999999999999999999999 99999999999999999999999997521
Q ss_pred -------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhcc---chhhh--------h
Q 045127 384 -------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYP---ENLQL--------V 433 (508)
Q Consensus 384 -------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~---~~~~~--------~ 433 (508)
.++.++||||||+++|||++|+.||....... .+......... ..... .
T Consensus 159 ~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (287)
T cd07840 159 TNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELE-QLEKIFELCGSPTDENWPGVSKLPWFEN 237 (287)
T ss_pred cccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCchhhccccccchhhhh
Confidence 23567899999999999999999997533211 11111110000 00000 0
Q ss_pred hhhcccCC----cchHH-HHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 434 VDERMMLT----ENMFD-QAEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 434 ~~~~l~~~----~~~~~-~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
..+..... ..... ....+.+++.+||+.+|.+||++.++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 238 LKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred ccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 00000000 00001 1567889999999999999999999976
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=99.98 E-value=7.9e-32 Score=267.61 Aligned_cols=236 Identities=18% Similarity=0.200 Sum_probs=177.2
Q ss_pred hhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCH-HHHHHHHHHHHHHhhcCCCCccceeeEEecC--CeeE
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSR-EIRDEFVEECKLLVQFQHKNLIRVLGWNNSR--RTRA 311 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~ 311 (508)
..++|+..+.||+|+||.||+|.. .+|+.||+|.++..... .....+.+|+.++++++|+||+++++++... +..+
T Consensus 5 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (309)
T cd07845 5 SVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIF 84 (309)
T ss_pred cccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEE
Confidence 457899999999999999999997 46899999998643322 1234567899999999999999999998754 5679
Q ss_pred EEEeecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC------
Q 045127 312 IVTEWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------ 383 (508)
Q Consensus 312 lv~e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------ 383 (508)
+||||+++ +|.+++. ...+++.++..++.|+++||+|||+. |++||||||+||+++.++.+||+|||.+.
T Consensus 85 lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~ 162 (309)
T cd07845 85 LVMEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHEN-FIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPA 162 (309)
T ss_pred EEEecCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEECCCCCEEECccceeeecCCcc
Confidence 99999964 8888876 46689999999999999999999999 99999999999999999999999997531
Q ss_pred ----------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhh---hh---
Q 045127 384 ----------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLV---VD--- 435 (508)
Q Consensus 384 ----------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--- 435 (508)
.++.++||||+||++|||++|+.||....... ....+........... ++
T Consensus 163 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 240 (309)
T cd07845 163 KPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIE--QLDLIIQLLGTPNESIWPGFSDLP 240 (309)
T ss_pred CCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHhcCCCChhhchhhhccc
Confidence 23567899999999999999999997533211 1111111110000000 00
Q ss_pred --hc--cc--CCcch----HHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 436 --ER--MM--LTENM----FDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 436 --~~--l~--~~~~~----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
.. +. ..... ......+.+++.+|++.||++|||+.|+++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h 290 (309)
T cd07845 241 LVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALES 290 (309)
T ss_pred ccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 00 00 00000 0124556789999999999999999999864
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.4e-31 Score=266.39 Aligned_cols=235 Identities=13% Similarity=0.169 Sum_probs=174.8
Q ss_pred CCCCCceeeecCCeEEEEEEEC---CCCEEEEEEecCCC--CHHHHHHHHHHHHHHhhcCCCCccceeeEEecC--CeeE
Q 045127 239 GFSKKNLVGKNEGAAIYKGILR---DGTRVKIEIYKGDV--SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSR--RTRA 311 (508)
Q Consensus 239 ~~~~~~~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~ 311 (508)
+|+..+.||+|++|.||+|... +++.||+|.+.... .......+.+|+.++++++||||+++++++... ...+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 4778899999999999999974 47999999997532 112346678899999999999999999999987 7899
Q ss_pred EEEeecCCCCHHHHhc------cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecC----CCceEEeeccC
Q 045127 312 IVTEWTNGGNVELWLS------ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTD----NLEPLISRFKI 381 (508)
Q Consensus 312 lv~e~~~~gsL~~~l~------~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~----~~~~kl~Dfg~ 381 (508)
+||||+++ ++.+++. ...+++..+..++.|++.||+|||+. +++||||||+||+++. ++.+|++|||.
T Consensus 81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~ 158 (316)
T cd07842 81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSN-WVLHRDLKPANILVMGEGPERGVVKIGDLGL 158 (316)
T ss_pred EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhC-CEeeCCCCHHHEEEcCCCCccceEEECCCcc
Confidence 99999975 6766654 23688999999999999999999999 9999999999999999 99999999986
Q ss_pred CC-------------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcc--------cHHHHH
Q 045127 382 EY-------------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEA--------GFIEYI 422 (508)
Q Consensus 382 ~~-------------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~--------~~~~~~ 422 (508)
+. .++.++||||||+++|||++|+.||........ .+...+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (316)
T cd07842 159 ARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIF 238 (316)
T ss_pred ccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHH
Confidence 32 234578999999999999999999975443220 011111
Q ss_pred HHhccc------------hhhhhhhhcc-cCCc--chH-------HHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 423 RMHYPE------------NLQLVVDERM-MLTE--NMF-------DQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 423 ~~~~~~------------~~~~~~~~~l-~~~~--~~~-------~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
...... ......+... .... ... .....+.+++.+|++.||++|||+.|+++.
T Consensus 239 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~ 313 (316)
T cd07842 239 EVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEH 313 (316)
T ss_pred HHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 000000 0000000000 0000 000 123568889999999999999999999853
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the |
| >cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.5e-31 Score=267.89 Aligned_cols=242 Identities=16% Similarity=0.130 Sum_probs=183.2
Q ss_pred HHHHhhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCC-CHHHHHHHHHHHHHHhhcCCCCccceeeEEec-CC
Q 045127 232 MLKAATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDV-SREIRDEFVEECKLLVQFQHKNLIRVLGWNNS-RR 308 (508)
Q Consensus 232 ~l~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~ 308 (508)
++..++++|+..+.||.|+||.||+|.. .+++.||+|.+.... .....+.+.+|++++++++||||+++.+++.. ..
T Consensus 4 ~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~ 83 (328)
T cd07856 4 TVFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLE 83 (328)
T ss_pred ceeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCC
Confidence 4456788999999999999999999986 478999999885432 22345678899999999999999999998865 56
Q ss_pred eeEEEEeecCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC------
Q 045127 309 TRAIVTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE------ 382 (508)
Q Consensus 309 ~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~------ 382 (508)
..+++|||+ +++|.+++....+++.....++.|+++||+|||+. +++||||+|+||++++++.++++|||.+
T Consensus 84 ~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~ql~~aL~~LH~~-~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~ 161 (328)
T cd07856 84 DIYFVTELL-GTDLHRLLTSRPLEKQFIQYFLYQILRGLKYVHSA-GVVHRDLKPSNILINENCDLKICDFGLARIQDPQ 161 (328)
T ss_pred cEEEEeehh-ccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHEeECCCCCEEeCccccccccCCC
Confidence 789999998 56999998877889999999999999999999999 9999999999999999999999999853
Q ss_pred -------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcc--cHH--------HHHHHhccchhhhh
Q 045127 383 -------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEA--GFI--------EYIRMHYPENLQLV 433 (508)
Q Consensus 383 -------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~--~~~--------~~~~~~~~~~~~~~ 433 (508)
..++.++||||||+++|+|++|+.||........ .+. ++..........+.
T Consensus 162 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (328)
T cd07856 162 MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRF 241 (328)
T ss_pred cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHH
Confidence 1345679999999999999999999964321100 000 00100000000001
Q ss_pred hhhcc-cCCcch----HHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 434 VDERM-MLTENM----FDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 434 ~~~~l-~~~~~~----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
+.... ...... ......+.+++.+|++.+|++|||+++++..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 242 VQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred HhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00000 000000 0123578889999999999999999999875
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U |
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=99.98 E-value=6.9e-32 Score=266.88 Aligned_cols=236 Identities=15% Similarity=0.153 Sum_probs=177.6
Q ss_pred HhhcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCC-HHHHHHHHHHHHHHhhcCCCCccceeeEEecCC----
Q 045127 235 AATNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVS-REIRDEFVEECKLLVQFQHKNLIRVLGWNNSRR---- 308 (508)
Q Consensus 235 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~---- 308 (508)
...++|+..+.||+|+||.||+|... +++.||+|.++.... ......+.+|++++++++||||+++++++.+..
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 45678999999999999999999984 589999999964332 223456788999999999999999999887654
Q ss_pred ------eeEEEEeecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeecc
Q 045127 309 ------TRAIVTEWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFK 380 (508)
Q Consensus 309 ------~~~lv~e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg 380 (508)
..++|+||+++ ++...+. ...+++..+..++.|++.||+|||+. ||+||||||+||++++++.+||+|||
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~i~H~dl~p~nili~~~~~~kl~dfg 161 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKK-NFLHRDIKCSNILLNNKGQIKLADFG 161 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEECCCCcEEeCccc
Confidence 78999999976 6777666 34689999999999999999999999 99999999999999999999999998
Q ss_pred CCC-----------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccch--
Q 045127 381 IEY-----------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPEN-- 429 (508)
Q Consensus 381 ~~~-----------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~-- 429 (508)
.+. ..+.++|||||||++|||++|+.||...... ..+.. +.......
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~-~~~~~-~~~~~~~~~~ 239 (302)
T cd07864 162 LARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQEL-AQLEL-ISRLCGSPCP 239 (302)
T ss_pred ccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH-HHHHH-HHHHhCCCCh
Confidence 632 1245789999999999999999999743211 11111 11111000
Q ss_pred --hhhhhh--------hcccCCc----chHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 430 --LQLVVD--------ERMMLTE----NMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 430 --~~~~~~--------~~l~~~~----~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
...+.. +.-.... ........+.+++.+||+.||++|||+.+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 240 AVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred hhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 000000 0000000 00012456789999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.3e-31 Score=256.97 Aligned_cols=221 Identities=14% Similarity=0.164 Sum_probs=174.7
Q ss_pred cCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCC----CCHHHHHHHHHHHHHHhhcCCCCccceeeEEecC--Cee
Q 045127 238 NGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGD----VSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSR--RTR 310 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~----~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~ 310 (508)
.+|+..+.||+|+||.||+|.. .++..||+|.+... ........+.+|++++++++||||+++++++.+. ...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 4688899999999999999997 46899999987532 1223456889999999999999999999998754 457
Q ss_pred EEEEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC------
Q 045127 311 AIVTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------ 383 (508)
Q Consensus 311 ~lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------ 383 (508)
+++|||+++++|.+++. ...+++....+++.|++.||.|||+. +++|+||||+||+++.++.++|+|||.+.
T Consensus 82 ~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~-~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~ 160 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSN-MIVHRDIKGANILRDSAGNVKLGDFGASKRIQTIC 160 (264)
T ss_pred EEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC-CEecCCCCHHHEEEcCCCCEEECcccccccccccc
Confidence 89999999999999987 45689999999999999999999999 99999999999999999999999998652
Q ss_pred ------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhccc
Q 045127 384 ------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMM 439 (508)
Q Consensus 384 ------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 439 (508)
..+.++|||||||++||+++|+.||....... . +........ .+.+
T Consensus 161 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~----~-~~~~~~~~~----~~~~- 230 (264)
T cd06653 161 MSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMA----A-IFKIATQPT----KPML- 230 (264)
T ss_pred ccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHH----H-HHHHHcCCC----CCCC-
Confidence 13457899999999999999999997432111 1 111110000 0111
Q ss_pred CCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 440 LTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 440 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
.......+.+++.+|+. +|..||++.+++.
T Consensus 231 ----p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 231 ----PDGVSDACRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred ----CcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence 01224567788899999 5799999998875
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >PHA02882 putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.3e-31 Score=264.31 Aligned_cols=230 Identities=11% Similarity=0.146 Sum_probs=164.2
Q ss_pred hcCCCCCceeeecCCeEEEEEEECC----CCEEEEEEecCCCCHHH----------HHHHHHHHHHHhhcCCCCccceee
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGILRD----GTRVKIEIYKGDVSREI----------RDEFVEECKLLVQFQHKNLIRVLG 302 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~~~~----------~~~~~~E~~~l~~l~h~niv~~~~ 302 (508)
.++|++.+.||+|+||.||+|...+ +..+|+|+......... ......+...+..++|++++++++
T Consensus 11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~ 90 (294)
T PHA02882 11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG 90 (294)
T ss_pred CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence 3679999999999999999999743 45667776432221100 111233444566678999999998
Q ss_pred EEecCC----eeEEEEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEe
Q 045127 303 WNNSRR----TRAIVTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLIS 377 (508)
Q Consensus 303 ~~~~~~----~~~lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~ 377 (508)
.+.... ..++++|++.. ++.+.+. ....++..+..++.|++.||+|||+. +|+||||||+|||++.++.++|+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~iiHrDiKp~Nill~~~~~~~l~ 168 (294)
T PHA02882 91 CGSFKRCRMYYRFILLEKLVE-NTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEH-GISHGDIKPENIMVDGNNRGYII 168 (294)
T ss_pred eeeEecCCceEEEEEEehhcc-CHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEcCCCcEEEE
Confidence 766443 34778887743 6666665 33467888999999999999999999 99999999999999999999999
Q ss_pred eccCCC----------------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHH
Q 045127 378 RFKIEY----------------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIR 423 (508)
Q Consensus 378 Dfg~~~----------------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~ 423 (508)
|||++. .++.++|||||||++|||++|+.||........ +.....
T Consensus 169 DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~-~~~~~~ 247 (294)
T PHA02882 169 DYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGN-LIHAAK 247 (294)
T ss_pred EcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchH-HHHHhH
Confidence 999852 134578999999999999999999986532221 111111
Q ss_pred HhccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHH
Q 045127 424 MHYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMI 476 (508)
Q Consensus 424 ~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L 476 (508)
..+ ...+....... ......+.+++..|++.+|++||+++++.+.+
T Consensus 248 ~~~---~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 248 CDF---IKRLHEGKIKI----KNANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred HHH---HHHhhhhhhcc----CCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 111 01111111111 11245678899999999999999999999876
|
|
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.4e-31 Score=270.01 Aligned_cols=245 Identities=13% Similarity=0.150 Sum_probs=184.7
Q ss_pred CCHHHHHHhhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCC-CHHHHHHHHHHHHHHhhcCCCCccceeeEEe
Q 045127 228 FTTWMLKAATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDV-SREIRDEFVEECKLLVQFQHKNLIRVLGWNN 305 (508)
Q Consensus 228 ~~~~~l~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 305 (508)
....++....++|+..+.||+|+||.||+|.. .+++.||+|++.... .....+.+.+|+.++++++||||+++++++.
T Consensus 7 ~~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~ 86 (345)
T cd07877 7 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT 86 (345)
T ss_pred hHHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeee
Confidence 34566778889999999999999999999986 578999999986532 2233567889999999999999999999876
Q ss_pred cC------CeeEEEEeecCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeec
Q 045127 306 SR------RTRAIVTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRF 379 (508)
Q Consensus 306 ~~------~~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Df 379 (508)
.. ...+++++++ +++|.+++....+++..+..++.|+++||+|||+. |++||||||+||+++.++.+||+||
T Consensus 87 ~~~~~~~~~~~~lv~~~~-~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivH~dlkp~NIll~~~~~~kl~df 164 (345)
T cd07877 87 PARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDCELKILDF 164 (345)
T ss_pred ecccccccccEEEEehhc-ccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCChHHEEEcCCCCEEEecc
Confidence 43 3467888876 78999998877899999999999999999999999 9999999999999999999999999
Q ss_pred cCCC-------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhc--cchhhh
Q 045127 380 KIEY-------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHY--PENLQL 432 (508)
Q Consensus 380 g~~~-------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~--~~~~~~ 432 (508)
|.+. .++.++|||||||++|||++|+.||....... .+........ +.....
T Consensus 165 g~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~ 243 (345)
T cd07877 165 GLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID-QLKLILRLVGTPGAELLK 243 (345)
T ss_pred cccccccccccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCHHHHh
Confidence 8632 24567999999999999999999996432111 1111111000 000000
Q ss_pred hhh--------hccc---CCcc---hHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 433 VVD--------ERMM---LTEN---MFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 433 ~~~--------~~l~---~~~~---~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
.+. ..+. .... .......+.+++.+|++.||.+||++.++++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 300 (345)
T cd07877 244 KISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 300 (345)
T ss_pred hcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence 000 0000 0000 00123457789999999999999999999876
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.3e-31 Score=255.04 Aligned_cols=221 Identities=18% Similarity=0.230 Sum_probs=180.8
Q ss_pred CCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCC-HHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEee
Q 045127 239 GFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVS-REIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEW 316 (508)
Q Consensus 239 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 316 (508)
+|+..+.||+|++|.||++... ++..|++|.+..... ......+.+|++++++++|||++++.+.+..+...++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 4778899999999999999974 689999999964432 34567889999999999999999999999988999999999
Q ss_pred cCCCCHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC--------
Q 045127 317 TNGGNVELWLSE-----SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY-------- 383 (508)
Q Consensus 317 ~~~gsL~~~l~~-----~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~-------- 383 (508)
+++++|.+++.. ..+++..+..++.|++.||.|||+. |++|+||+|+||++++++.++|+|||.+.
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~-~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~ 159 (258)
T cd08215 81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSR-KILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDL 159 (258)
T ss_pred cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhC-CEecccCChHHeEEcCCCcEEECCccceeecccCcce
Confidence 999999999873 6789999999999999999999999 99999999999999999999999997632
Q ss_pred -------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcch
Q 045127 384 -------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENM 444 (508)
Q Consensus 384 -------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 444 (508)
.++.++||||+|+++++|++|+.||..... ............ +.+.
T Consensus 160 ~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~-----~~~~~~~~~~~~-----~~~~----- 224 (258)
T cd08215 160 AKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENL-----LELALKILKGQY-----PPIP----- 224 (258)
T ss_pred ecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcH-----HHHHHHHhcCCC-----CCCC-----
Confidence 245679999999999999999999864321 111111111100 0010
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 445 FDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 445 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
......+.+++.+||..+|++|||+.|+++.
T Consensus 225 ~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 255 (258)
T cd08215 225 SQYSSELRNLVSSLLQKDPEERPSIAQILQS 255 (258)
T ss_pred CCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0124567789999999999999999999863
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.9e-31 Score=260.60 Aligned_cols=216 Identities=15% Similarity=0.123 Sum_probs=169.6
Q ss_pred eeecCCeEEEEEEE-CCCCEEEEEEecCCCC--HHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEeecCCCCH
Q 045127 246 VGKNEGAAIYKGIL-RDGTRVKIEIYKGDVS--REIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWTNGGNV 322 (508)
Q Consensus 246 lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 322 (508)
||+|+||+||+|.. .+|+.||+|.+..... ......+..|++++++++||||+++++++...+..++||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 68999999999986 4689999999864321 22345677899999999999999999999999999999999999999
Q ss_pred HHHhcc---CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC----------------
Q 045127 323 ELWLSE---SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY---------------- 383 (508)
Q Consensus 323 ~~~l~~---~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~---------------- 383 (508)
.+++.. ..+++..+..++.|++.||.|||+. |++||||+|+||+++.++.++++|||.+.
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~-~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~ 159 (277)
T cd05577 81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQR-RIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKIKGRAGTPG 159 (277)
T ss_pred HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHEEECCCCCEEEccCcchhhhccCCccccccCCCC
Confidence 999872 3689999999999999999999999 99999999999999999999999998532
Q ss_pred ----------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHHHHHHH
Q 045127 384 ----------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQAEQGLG 453 (508)
Q Consensus 384 ----------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~ 453 (508)
.++.++||||||+++|+|++|+.||....... .... +...... ...... ......+.+
T Consensus 160 y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~-~~~~~~~-------~~~~~~---~~~~~~~~~ 227 (277)
T cd05577 160 YMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKV-EKEE-LKRRTLE-------MAVEYP---DKFSPEAKD 227 (277)
T ss_pred cCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccc-cHHH-HHhcccc-------ccccCC---ccCCHHHHH
Confidence 24567899999999999999999997543211 0111 1110000 000000 112445678
Q ss_pred HHHhcCCCCCCCCC-----CHHHHHH
Q 045127 454 LGLMCTDQPTGKLP-----SLVQIYN 474 (508)
Q Consensus 454 l~~~Cl~~dP~~RP-----s~~evl~ 474 (508)
++.+||+.||++|| ++.++++
T Consensus 228 li~~~l~~~p~~R~~~~~~~~~~ll~ 253 (277)
T cd05577 228 LCEALLQKDPEKRLGCRGGSADEVRE 253 (277)
T ss_pred HHHHHccCChhHccCCCcccHHHHHh
Confidence 89999999999999 6666664
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=9.8e-32 Score=263.17 Aligned_cols=232 Identities=15% Similarity=0.136 Sum_probs=175.8
Q ss_pred CCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcC-CCCccceeeEEecCCeeEEEEeec
Q 045127 240 FSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQ-HKNLIRVLGWNNSRRTRAIVTEWT 317 (508)
Q Consensus 240 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~ 317 (508)
|+..+.||+|++|.||+|... +++.|++|.+.............+|+..+++++ |||++++++++..++..++||||+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM 80 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence 567789999999999999985 578999999865443333445567999999999 999999999999999999999999
Q ss_pred CCCCHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-----------
Q 045127 318 NGGNVELWLSE---SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY----------- 383 (508)
Q Consensus 318 ~~gsL~~~l~~---~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~----------- 383 (508)
+|+|.+++.. ..+++..+..++.|++.||.|||++ +++|+||+|+||++++++.++|+|||.+.
T Consensus 81 -~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~-~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~ 158 (283)
T cd07830 81 -EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKH-GFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPPYTDY 158 (283)
T ss_pred -CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCChhhEEEcCCCCEEEeecccceeccCCCCcCCC
Confidence 7899988872 3789999999999999999999999 99999999999999999999999997531
Q ss_pred ----------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhcc--------ch--hhhhhhhc
Q 045127 384 ----------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYP--------EN--LQLVVDER 437 (508)
Q Consensus 384 ----------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~--------~~--~~~~~~~~ 437 (508)
.++.++||||||+++|||++|+.||........ +.. ...... +. .....+..
T Consensus 159 ~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (283)
T cd07830 159 VSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQ-LYK-ICSVLGTPTKQDWPEGYKLASKLGFR 236 (283)
T ss_pred CCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHH-HHH-HHHhcCCCChhhhhhHhhhhcccccc
Confidence 235679999999999999999999864432111 100 000000 00 00000000
Q ss_pred ccCCc-c-----hHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 438 MMLTE-N-----MFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 438 l~~~~-~-----~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
+.... . .......+.+++.+||+.||++|||++|++..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 280 (283)
T cd07830 237 FPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQH 280 (283)
T ss_pred ccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhC
Confidence 00000 0 00113568899999999999999999999753
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili |
| >PLN00009 cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.7e-31 Score=263.17 Aligned_cols=234 Identities=12% Similarity=0.166 Sum_probs=174.3
Q ss_pred cCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCC-HHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEe
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVS-REIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTE 315 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 315 (508)
++|+..+.||+|++|.||+|... +++.||+|.+..... ......+.+|++++++++||||+++++++..+...++|||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 57888999999999999999974 689999999864322 2234678899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecC-CCceEEeeccCCC--------
Q 045127 316 WTNGGNVELWLS---ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTD-NLEPLISRFKIEY-------- 383 (508)
Q Consensus 316 ~~~~gsL~~~l~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~-~~~~kl~Dfg~~~-------- 383 (508)
|++ ++|.+++. ...+++..+..++.||+.||+|||++ +++||||+|+||+++. ++.+||+|||.+.
T Consensus 82 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~-~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~~ 159 (294)
T PLN00009 82 YLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSH-RVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRT 159 (294)
T ss_pred ccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCCcceEEEECCCCEEEEcccccccccCCCccc
Confidence 996 57877775 22357888889999999999999999 9999999999999985 5679999998531
Q ss_pred --------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhh----------hh
Q 045127 384 --------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQ----------LV 433 (508)
Q Consensus 384 --------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~----------~~ 433 (508)
.++.++||||||+++|+|+||+.||......+ .+..... ....... +.
T Consensus 160 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~ 237 (294)
T PLN00009 160 FTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEID-ELFKIFR-ILGTPNEETWPGVTSLPDY 237 (294)
T ss_pred cccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHH-HhCCCChhhccccccchhh
Confidence 23457999999999999999999996432211 1111110 0000000 00
Q ss_pred hh--hcccCCc---chHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 434 VD--ERMMLTE---NMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 434 ~~--~~l~~~~---~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
.. +...... ........+.+++.+|++.+|++||++.++++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~ 284 (294)
T PLN00009 238 KSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEH 284 (294)
T ss_pred hhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00 0000000 000123457789999999999999999999863
|
|
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.2e-31 Score=253.99 Aligned_cols=220 Identities=16% Similarity=0.288 Sum_probs=179.4
Q ss_pred CCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCC-HHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEee
Q 045127 239 GFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVS-REIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEW 316 (508)
Q Consensus 239 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 316 (508)
+|+..+.||+|++|.||+|... +++.|++|.+..... ....+.+.+|++++++++|||++++++++..+...+++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 4778899999999999999874 678999999965432 24567899999999999999999999999999999999999
Q ss_pred cCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC------------
Q 045127 317 TNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------------ 383 (508)
Q Consensus 317 ~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------------ 383 (508)
+++++|.+++. ...+++..+..++.|++.||.|||+. |++||||||+||+++.++.++|+|||.+.
T Consensus 81 ~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~ 159 (254)
T cd06627 81 AENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQ-GVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDASV 159 (254)
T ss_pred CCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhC-CcccCCCCHHHEEECCCCCEEEeccccceecCCCccccccc
Confidence 99999999987 46789999999999999999999999 99999999999999999999999998532
Q ss_pred ---------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHH
Q 045127 384 ---------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQA 448 (508)
Q Consensus 384 ---------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 448 (508)
..+.++||||+|+++|+|++|+.||..... ........ .... +.+. ....
T Consensus 160 ~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~----~~~~~~~~-~~~~-----~~~~-----~~~~ 224 (254)
T cd06627 160 VGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNP----MAALFRIV-QDDH-----PPLP-----EGIS 224 (254)
T ss_pred ccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccH----HHHHHHHh-ccCC-----CCCC-----CCCC
Confidence 234679999999999999999999874321 11111110 0000 0010 0113
Q ss_pred HHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 449 EQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 449 ~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
..+.+++.+|+..+|++|||+.+++.
T Consensus 225 ~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 225 PELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred HHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 46678899999999999999999875
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.2e-31 Score=259.22 Aligned_cols=219 Identities=12% Similarity=0.098 Sum_probs=167.9
Q ss_pred ceeeecCCeEEEEEEE-CCCCEEEEEEecCCCC--HHHHHHHHHHHHHH-hhcCCCCccceeeEEecCCeeEEEEeecCC
Q 045127 244 NLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVS--REIRDEFVEECKLL-VQFQHKNLIRVLGWNNSRRTRAIVTEWTNG 319 (508)
Q Consensus 244 ~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l-~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 319 (508)
+.||+|+||.||+|.. .+++.||+|.++.... ......+..|..++ ...+|+|++++++++..++..++||||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 5689999999999997 4689999999864321 12233445555544 445899999999999999999999999999
Q ss_pred CCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC---------------
Q 045127 320 GNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY--------------- 383 (508)
Q Consensus 320 gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~--------------- 383 (508)
++|.+++. ...+++..+..++.|++.||.|||+. +++||||+|+||+++.++.++|+|||.+.
T Consensus 82 ~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~-~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~y~ 160 (260)
T cd05611 82 GDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQR-GIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLENKKFVGTPDYL 160 (260)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHeEECCCCcEEEeecccceeccccccCCCCcCcc
Confidence 99999997 46789999999999999999999999 99999999999999999999999998642
Q ss_pred --------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCC-cchHHHHHHHHHH
Q 045127 384 --------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLT-ENMFDQAEQGLGL 454 (508)
Q Consensus 384 --------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~l~~l 454 (508)
.++.++||||||+++|||++|..||...... ....... ....... .........+.++
T Consensus 161 ~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-----~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~ 227 (260)
T cd05611 161 APETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPD-----AVFDNIL--------SRRINWPEEVKEFCSPEAVDL 227 (260)
T ss_pred ChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHH-----HHHHHHH--------hcccCCCCcccccCCHHHHHH
Confidence 2466899999999999999999999643211 1111100 0000000 0001124567889
Q ss_pred HHhcCCCCCCCCCCHHHHHHHH
Q 045127 455 GLMCTDQPTGKLPSLVQIYNMI 476 (508)
Q Consensus 455 ~~~Cl~~dP~~RPs~~evl~~L 476 (508)
+.+||+.+|++||++.++.+.+
T Consensus 228 i~~~l~~~p~~R~~~~~~~~~l 249 (260)
T cd05611 228 INRLLCMDPAKRLGANGYQEIK 249 (260)
T ss_pred HHHHccCCHHHccCCCcHHHHH
Confidence 9999999999999776554443
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=1e-31 Score=262.88 Aligned_cols=231 Identities=14% Similarity=0.155 Sum_probs=177.8
Q ss_pred CCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCH-HHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEeec
Q 045127 240 FSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSR-EIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWT 317 (508)
Q Consensus 240 ~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 317 (508)
|+..+.||+|++|.||+|.. .+++.+++|.+...... .....+.+|++++++++|+||+++++++..+...++||||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 56778999999999999997 46899999998654322 34567889999999999999999999999999999999999
Q ss_pred CCCCHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC-------------
Q 045127 318 NGGNVELWLSE--SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE------------- 382 (508)
Q Consensus 318 ~~gsL~~~l~~--~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~------------- 382 (508)
++ ++.+++.. ..+++..+..++.|++.||+|||+. +++|+||||+||+++.++.++|+|||.+
T Consensus 81 ~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~-~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~~~~~ 158 (283)
T cd05118 81 DT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSH-GILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRPYTHY 158 (283)
T ss_pred CC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHC-CeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcccccCc
Confidence 75 88888763 4789999999999999999999999 9999999999999999999999999652
Q ss_pred --------------C-CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccch----hhhhhh------hc
Q 045127 383 --------------Y-QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPEN----LQLVVD------ER 437 (508)
Q Consensus 383 --------------~-~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~----~~~~~~------~~ 437 (508)
. ..+.++||||||+++|+|+||+.||......+ .+.... ...... .....+ ..
T Consensus 159 ~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 236 (283)
T cd05118 159 VVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEID-QLFKIF-RTLGTPDPEVWPKFTSLARNYKFS 236 (283)
T ss_pred cCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHH-HHcCCCchHhcccchhhhhhhhhh
Confidence 1 34567999999999999999999986433211 111111 000000 000000 00
Q ss_pred c------cCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 438 M------MLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 438 l------~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
. ............+.+++.+||+.||.+||++.+++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 237 FPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred hccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 0 000001123567889999999999999999999986
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They |
| >PHA03390 pk1 serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.6e-31 Score=257.36 Aligned_cols=227 Identities=11% Similarity=0.086 Sum_probs=174.6
Q ss_pred CHHHHHHhhcCCCCCcee--eecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhc-CCCCccceeeEE
Q 045127 229 TTWMLKAATNGFSKKNLV--GKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQF-QHKNLIRVLGWN 304 (508)
Q Consensus 229 ~~~~l~~~~~~~~~~~~l--g~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~ 304 (508)
+..+.....++|+..+.+ |+|+||.||++.. .++..+|+|.+....... .|+.....+ +||||+++++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~------~e~~~~~~~~~h~~iv~~~~~~ 78 (267)
T PHA03390 5 SLSELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA------IEPMVHQLMKDNPNFIKLYYSV 78 (267)
T ss_pred HHHHHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch------hhHHHHHHhhcCCCEEEEEEEE
Confidence 345556666788887777 9999999999996 468899999985432111 122222222 699999999999
Q ss_pred ecCCeeEEEEeecCCCCHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCC-ceEEeeccCC
Q 045127 305 NSRRTRAIVTEWTNGGNVELWLSE-SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNL-EPLISRFKIE 382 (508)
Q Consensus 305 ~~~~~~~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~-~~kl~Dfg~~ 382 (508)
..++..++||||+++++|.+++.. ..+++.++..++.|+++||.|||+. |++||||||+||+++.++ .++++|||.+
T Consensus 79 ~~~~~~~iv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~nil~~~~~~~~~l~dfg~~ 157 (267)
T PHA03390 79 TTLKGHVLIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKH-NIIHNDIKLENVLYDRAKDRIYLCDYGLC 157 (267)
T ss_pred ecCCeeEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC-CeeeCCCCHHHEEEeCCCCeEEEecCccc
Confidence 999999999999999999999984 4889999999999999999999999 999999999999999888 9999999863
Q ss_pred -----------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhccc
Q 045127 383 -----------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMM 439 (508)
Q Consensus 383 -----------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 439 (508)
..++.++||||||+++|||++|+.||............+.... .....
T Consensus 158 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~---------~~~~~ 228 (267)
T PHA03390 158 KIIGTPSCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQ---------QKKLP 228 (267)
T ss_pred eecCCCccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhh---------cccCC
Confidence 2446678999999999999999999974433322222222111 01110
Q ss_pred CCcchHHHHHHHHHHHHhcCCCCCCCCCC-HHHHHH
Q 045127 440 LTENMFDQAEQGLGLGLMCTDQPTGKLPS-LVQIYN 474 (508)
Q Consensus 440 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-~~evl~ 474 (508)
. .......+.+++.+||+.+|.+||+ ++|+++
T Consensus 229 ~---~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 229 F---IKNVSKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred c---ccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 0 0123456778889999999999996 688874
|
|
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=99.98 E-value=6.3e-31 Score=261.68 Aligned_cols=220 Identities=17% Similarity=0.230 Sum_probs=174.0
Q ss_pred CCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCC--CHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEee
Q 045127 240 FSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDV--SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEW 316 (508)
Q Consensus 240 ~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 316 (508)
|...+.||+|+||.||+|.. .+++.|++|.+.... .......+.+|+++++.++|||++++++++.+....++||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 56668899999999999997 468899999986432 223456788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-----------
Q 045127 317 TNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY----------- 383 (508)
Q Consensus 317 ~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~----------- 383 (508)
+. |++.+++. ...+++.++..++.|++.|+.|||+. |++||||+|+||+++.++.+||+|||.+.
T Consensus 103 ~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~-gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~~~~~~~~ 180 (313)
T cd06633 103 CL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSH-NMIHRDIKAGNILLTEPGQVKLADFGSASKSSPANSFVGT 180 (313)
T ss_pred CC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCChhhEEECCCCCEEEeecCCCcccCCCCCcccc
Confidence 96 57777775 45689999999999999999999999 99999999999999999999999997531
Q ss_pred ---------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHH
Q 045127 384 ---------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQA 448 (508)
Q Consensus 384 ---------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 448 (508)
.++.++|||||||++|||++|..||....... .......... +.... ....
T Consensus 181 ~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~-----~~~~~~~~~~-----~~~~~----~~~~ 246 (313)
T cd06633 181 PYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-----ALYHIAQNDS-----PTLQS----NEWT 246 (313)
T ss_pred ccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHH-----HHHHHHhcCC-----CCCCc----cccC
Confidence 24557899999999999999999986532111 1111100000 00000 0112
Q ss_pred HHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 449 EQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 449 ~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
..+.+++.+||+.+|.+||++.+++..
T Consensus 247 ~~l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 247 DSFRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred HHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 356788999999999999999999864
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=99.98 E-value=9.5e-32 Score=260.01 Aligned_cols=217 Identities=16% Similarity=0.204 Sum_probs=173.1
Q ss_pred eeecCCeEEEEEEEC-CCCEEEEEEecCCCC--HHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEeecCCCCH
Q 045127 246 VGKNEGAAIYKGILR-DGTRVKIEIYKGDVS--REIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWTNGGNV 322 (508)
Q Consensus 246 lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 322 (508)
||+|+||.||++... +|+.+++|.+..... ....+.+.+|++++++++||||+++++.+..+...+++|||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 689999999999985 489999999864332 23567789999999999999999999999999999999999999999
Q ss_pred HHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC------------------
Q 045127 323 ELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------------------ 383 (508)
Q Consensus 323 ~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------------------ 383 (508)
.+++. ...+++..+..++.|+++||+|||+. +++||||+|+||++++++.++|+|||++.
T Consensus 81 ~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~-~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~ 159 (265)
T cd05579 81 ASLLENVGSLDEDVARIYIAEIVLALEYLHSN-GIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDK 159 (265)
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHc-CeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccccccccc
Confidence 99997 45789999999999999999999999 99999999999999999999999998532
Q ss_pred -----------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHH
Q 045127 384 -----------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFD 446 (508)
Q Consensus 384 -----------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 446 (508)
..+.++||||||+++||+++|+.||...... ....... ......... ..
T Consensus 160 ~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~-----~~~~~~~--------~~~~~~~~~-~~ 225 (265)
T cd05579 160 RIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPE-----EIFQNIL--------NGKIEWPED-VE 225 (265)
T ss_pred CcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHHh--------cCCcCCCcc-cc
Confidence 1234789999999999999999999743211 1111110 000000000 01
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCHHHHHHHHH
Q 045127 447 QAEQGLGLGLMCTDQPTGKLPSLVQIYNMIT 477 (508)
Q Consensus 447 ~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~ 477 (508)
....+.+++.+||+.+|++|||+.++.+.|+
T Consensus 226 ~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~ 256 (265)
T cd05579 226 VSDEAIDLISKLLVPDPEKRLGAKSIEEIKN 256 (265)
T ss_pred CCHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence 1456778999999999999999955555443
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.98 E-value=8.4e-32 Score=258.50 Aligned_cols=223 Identities=18% Similarity=0.210 Sum_probs=182.8
Q ss_pred cCCCCCceeeecCCeEEEEEEECC-CCEEEEEEecCCCC--HHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEE
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILRD-GTRVKIEIYKGDVS--REIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVT 314 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 314 (508)
++|+..+.||+|.-|+||.+...+ +..+|+|++.+... .....+...|-++|+.++||.++.+|+.++.+...|++|
T Consensus 77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~m 156 (459)
T KOG0610|consen 77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVM 156 (459)
T ss_pred HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEE
Confidence 345666899999999999999854 58999999964432 234567788999999999999999999999999999999
Q ss_pred eecCCCCHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC---------
Q 045127 315 EWTNGGNVELWLS---ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE--------- 382 (508)
Q Consensus 315 e~~~~gsL~~~l~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~--------- 382 (508)
|||+||+|....+ ++.+++..+.-++..|+-||+|||-. |||.|||||+|||+.++|.+.|+||.++
T Consensus 157 eyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHml-GivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~ 235 (459)
T KOG0610|consen 157 EYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHML-GIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTL 235 (459)
T ss_pred ecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhh-ceeeccCCcceeEEecCCcEEeeeccccccCCCCCee
Confidence 9999999999988 67899999999999999999999999 9999999999999999999999999321
Q ss_pred -------------------------------C-------------------------------------------CCCCc
Q 045127 383 -------------------------------Y-------------------------------------------QHRST 388 (508)
Q Consensus 383 -------------------------------~-------------------------------------------~~~~~ 388 (508)
. ..+.+
T Consensus 236 ~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgsA 315 (459)
T KOG0610|consen 236 VKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGSA 315 (459)
T ss_pred eccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCCch
Confidence 0 01235
Q ss_pred chhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCC
Q 045127 389 KYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPS 468 (508)
Q Consensus 389 ~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs 468 (508)
+|.|+|||++|||+.|+-||.+..+.+ .+..++.+.+..... ......+.++|.+.+.+||.+|-.
T Consensus 316 VDWWtfGIflYEmLyG~TPFKG~~~~~-------------Tl~NIv~~~l~Fp~~-~~vs~~akDLIr~LLvKdP~kRlg 381 (459)
T KOG0610|consen 316 VDWWTFGIFLYEMLYGTTPFKGSNNKE-------------TLRNIVGQPLKFPEE-PEVSSAAKDLIRKLLVKDPSKRLG 381 (459)
T ss_pred hhHHHHHHHHHHHHhCCCCcCCCCchh-------------hHHHHhcCCCcCCCC-CcchhHHHHHHHHHhccChhhhhc
Confidence 699999999999999999998655433 234444444432222 134567788899999999999988
Q ss_pred ----HHHHHHH
Q 045127 469 ----LVQIYNM 475 (508)
Q Consensus 469 ----~~evl~~ 475 (508)
+.||-+.
T Consensus 382 ~~rGA~eIK~H 392 (459)
T KOG0610|consen 382 SKRGAAEIKRH 392 (459)
T ss_pred cccchHHhhcC
Confidence 8888754
|
|
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.5e-31 Score=265.45 Aligned_cols=242 Identities=14% Similarity=0.193 Sum_probs=179.6
Q ss_pred hcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCC-HHHHHHHHHHHHHHhhcCCCCccceeeEEecC------C
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVS-REIRDEFVEECKLLVQFQHKNLIRVLGWNNSR------R 308 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------~ 308 (508)
.++|...+.||+|+||.||+|.. .+|+.||+|.+..... ......+.+|+.++++++||||+++++++... .
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 47899999999999999999997 4689999999864322 22345688999999999999999999988754 2
Q ss_pred eeEEEEeecCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-----
Q 045127 309 TRAIVTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY----- 383 (508)
Q Consensus 309 ~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~----- 383 (508)
..++|+||+.. +|..+. ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.+|++|||.+.
T Consensus 94 ~~~lv~e~~~~-~l~~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~-~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~~ 170 (342)
T cd07879 94 DFYLVMPYMQT-DLQKIM-GHPLSEDKVQYLVYQMLCGLKYIHSA-GIIHRDLKPGNLAVNEDCELKILDFGLARHADAE 170 (342)
T ss_pred eEEEEeccccc-CHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEECCCCCEEEeeCCCCcCCCCC
Confidence 46899999964 777765 45789999999999999999999999 99999999999999999999999998642
Q ss_pred --------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHh-cc-chhhhhh-------
Q 045127 384 --------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMH-YP-ENLQLVV------- 434 (508)
Q Consensus 384 --------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~-~~-~~~~~~~------- 434 (508)
.++.++|||||||++|||++|+.||....... .+....... .+ ..+.+..
T Consensus 171 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (342)
T cd07879 171 MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD-QLTQILKVTGVPGPEFVQKLEDKAAKS 249 (342)
T ss_pred CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcCCCCHHHHHHhcccchHH
Confidence 24567999999999999999999997432111 111111100 00 0000000
Q ss_pred --hh--cccCCcc---hHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH--HHHHHhh
Q 045127 435 --DE--RMMLTEN---MFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM--ITRAYKS 482 (508)
Q Consensus 435 --~~--~l~~~~~---~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~--L~~i~~~ 482 (508)
.. ....... .......+.+++.+||+.||++||+++|++.. +++.++.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~~ 306 (342)
T cd07879 250 YIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRDA 306 (342)
T ss_pred HHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcccc
Confidence 00 0000000 00123457789999999999999999999954 7776543
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.3e-31 Score=258.36 Aligned_cols=217 Identities=12% Similarity=0.108 Sum_probs=166.9
Q ss_pred eeeecCCeEEEEEEE-CCCCEEEEEEecCCCCH--HHHHHHHHHHH---HHhhcCCCCccceeeEEecCCeeEEEEeecC
Q 045127 245 LVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSR--EIRDEFVEECK---LLVQFQHKNLIRVLGWNNSRRTRAIVTEWTN 318 (508)
Q Consensus 245 ~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~--~~~~~~~~E~~---~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 318 (508)
.||+|+||.||+|.. .+++.||+|.+...... .....+..|.. .++...||+|+++.+++...+..++||||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 489999999999986 46899999998643221 11222334433 4444579999999999999999999999999
Q ss_pred CCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC--------------
Q 045127 319 GGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY-------------- 383 (508)
Q Consensus 319 ~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~-------------- 383 (508)
+|+|.+++. ...+++..+..++.|++.|++|||+. +++||||||+||+++.++.++|+|||.+.
T Consensus 81 g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~-~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 159 (278)
T cd05606 81 GGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNR-FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTH 159 (278)
T ss_pred CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CEEcCCCCHHHEEECCCCCEEEccCcCccccCccCCcCcCCCc
Confidence 999999886 56789999999999999999999999 99999999999999999999999998631
Q ss_pred ------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHHHHH
Q 045127 384 ------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQAEQG 451 (508)
Q Consensus 384 ------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l 451 (508)
.++.++||||+|+++|||++|+.||........ ........ ..+..+.. .....+
T Consensus 160 ~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~--~~~~~~~~------~~~~~~~~-----~~s~~~ 226 (278)
T cd05606 160 GYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK--HEIDRMTL------TMAVELPD-----SFSPEL 226 (278)
T ss_pred CCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccch--HHHHHHhh------ccCCCCCC-----cCCHHH
Confidence 246778999999999999999999975422111 00000000 00111110 114567
Q ss_pred HHHHHhcCCCCCCCCC-----CHHHHHHH
Q 045127 452 LGLGLMCTDQPTGKLP-----SLVQIYNM 475 (508)
Q Consensus 452 ~~l~~~Cl~~dP~~RP-----s~~evl~~ 475 (508)
.+++.+|+..+|.+|| ++.++++.
T Consensus 227 ~~li~~~l~~~p~~R~~~~~~~~~~ll~~ 255 (278)
T cd05606 227 RSLLEGLLQRDVNRRLGCLGRGAQEVKEH 255 (278)
T ss_pred HHHHHHHhhcCHHhccCCCCCCHHHHHhC
Confidence 7888999999999999 99999853
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=9.6e-33 Score=275.59 Aligned_cols=221 Identities=16% Similarity=0.221 Sum_probs=180.7
Q ss_pred CCCCCceeeecCCeEEEEEEECC-CCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEeec
Q 045127 239 GFSKKNLVGKNEGAAIYKGILRD-GTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWT 317 (508)
Q Consensus 239 ~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 317 (508)
.|.+...||.|+||.||+|..++ +-..|.|++ ...+.+..++|.-|+++|..++||+||++++.|...+..+|..|||
T Consensus 33 ~WeIiGELGDGAFGKVyKA~nket~~lAAaKvI-etkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC 111 (1187)
T KOG0579|consen 33 HWEIIGELGDGAFGKVYKAVNKETKLLAAAKVI-ETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFC 111 (1187)
T ss_pred HHHHHhhhcCccchhhhhhhcccchhhhhhhhh-cccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeec
Confidence 34556789999999999999765 344556777 4455667899999999999999999999999998889999999999
Q ss_pred CCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC-------------
Q 045127 318 NGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE------------- 382 (508)
Q Consensus 318 ~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~------------- 382 (508)
.||-.+..+- +..+++.++.-+++|++.||.|||++ +|||||||..|||++-+|.++++|||.+
T Consensus 112 ~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~-~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~qkRDsF 190 (1187)
T KOG0579|consen 112 GGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQ-NIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQKRDSF 190 (1187)
T ss_pred CCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhc-chhhhhccccceEEEecCcEeeecccccccchhHHhhhccc
Confidence 9999988776 78899999999999999999999999 9999999999999999999999999873
Q ss_pred -------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcc
Q 045127 383 -------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTEN 443 (508)
Q Consensus 383 -------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 443 (508)
.+|+.++||||||++|.||..+.+|..+...... +-..... -.|.+..+
T Consensus 191 IGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRV-----llKiaKS-----ePPTLlqP-- 258 (1187)
T KOG0579|consen 191 IGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRV-----LLKIAKS-----EPPTLLQP-- 258 (1187)
T ss_pred cCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHH-----HHHHhhc-----CCCcccCc--
Confidence 4677899999999999999999999765432211 1111111 11222111
Q ss_pred hHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 444 MFDQAEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 444 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
......+.++..+|+..||..||++.++++
T Consensus 259 -S~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~ 288 (1187)
T KOG0579|consen 259 -SHWSRSFSDFLKRCLVKNPRNRPPAAQLLK 288 (1187)
T ss_pred -chhhhHHHHHHHHHHhcCCccCCCHHHHhh
Confidence 234667788889999999999999999885
|
|
| >cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.3e-31 Score=265.62 Aligned_cols=240 Identities=14% Similarity=0.154 Sum_probs=183.2
Q ss_pred CCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCC-HHHHHHHHHHHHHHhhcCCCCccceeeEEecCC-----eeE
Q 045127 239 GFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVS-REIRDEFVEECKLLVQFQHKNLIRVLGWNNSRR-----TRA 311 (508)
Q Consensus 239 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-----~~~ 311 (508)
+|+..+.||+|++|.||+|... +++.||+|.+..... ....+.+.+|+.+++.++||||+++.+++.... ..|
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 4788899999999999999974 589999999865432 335678899999999999999999999988765 789
Q ss_pred EEEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-------
Q 045127 312 IVTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------- 383 (508)
Q Consensus 312 lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------- 383 (508)
++|||++ ++|.+++. ...+++..+..++.|++.||+|||+. |++||||||+||+++.++.++|+|||.+.
T Consensus 81 lv~e~~~-~~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~-gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~ 158 (330)
T cd07834 81 IVTELME-TDLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSA-NVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDED 158 (330)
T ss_pred EEecchh-hhHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEcCCCCEEEcccCceEeeccccc
Confidence 9999997 48988887 45789999999999999999999999 99999999999999999999999997531
Q ss_pred ------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhcc------------
Q 045127 384 ------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYP------------ 427 (508)
Q Consensus 384 ------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~------------ 427 (508)
.++.++||||||+++|+|++|+.||....... ....+.....
T Consensus 159 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~ 236 (330)
T cd07834 159 EKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYID--QLNLIVEVLGTPSEEDLKFITS 236 (330)
T ss_pred ccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHH--HHHHHHHhcCCCChhHhhhccc
Confidence 34567999999999999999999997543211 0111111000
Q ss_pred chhhhhhhhcccCCcc-----hHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH--HHHHHhh
Q 045127 428 ENLQLVVDERMMLTEN-----MFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM--ITRAYKS 482 (508)
Q Consensus 428 ~~~~~~~~~~l~~~~~-----~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~--L~~i~~~ 482 (508)
......+...-..... .......+.+++.+||+.+|++|||++++++. ++++...
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~~ 298 (330)
T cd07834 237 EKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHDP 298 (330)
T ss_pred cchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhccc
Confidence 0011111100000000 00124567889999999999999999999985 6666554
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and |
| >cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.6e-32 Score=270.74 Aligned_cols=243 Identities=13% Similarity=0.130 Sum_probs=182.3
Q ss_pred hhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCC-CHHHHHHHHHHHHHHhhcCCCCccceeeEEecC-----C
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDV-SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSR-----R 308 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-----~ 308 (508)
..++|...+.||+|+||.||+|.. .+++.||||.+.... .......+.+|+.+++.++||||+++++++... .
T Consensus 3 ~~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 82 (337)
T cd07858 3 VDTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFN 82 (337)
T ss_pred cccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccC
Confidence 346789999999999999999996 568999999986432 222355678899999999999999999987643 3
Q ss_pred eeEEEEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC----
Q 045127 309 TRAIVTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY---- 383 (508)
Q Consensus 309 ~~~lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~---- 383 (508)
..+++|||+. ++|.+++. ...+++..+..++.|++.||.|||++ +++||||||+||+++.++.+||+|||.+.
T Consensus 83 ~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~ 160 (337)
T cd07858 83 DVYIVYELMD-TDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSA-NVLHRDLKPSNLLLNANCDLKICDFGLARTTSE 160 (337)
T ss_pred cEEEEEeCCC-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC-CEecCCCCHHHEEEcCCCCEEECcCccccccCC
Confidence 4799999996 68988886 56789999999999999999999999 99999999999999999999999998632
Q ss_pred ------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhcc----c-------
Q 045127 384 ------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYP----E------- 428 (508)
Q Consensus 384 ------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~----~------- 428 (508)
.++.++|||||||++|+|++|+.||....... .......... +
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 238 (337)
T cd07858 161 KGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVH--QLKLITELLGSPSEEDLGFIRN 238 (337)
T ss_pred CcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHH--HHHHHHHHhCCCChHHhhhcCc
Confidence 24567999999999999999999996432110 0000100000 0
Q ss_pred -hhhhhhhhcccCC-----cchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH--HHHHHhh
Q 045127 429 -NLQLVVDERMMLT-----ENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM--ITRAYKS 482 (508)
Q Consensus 429 -~~~~~~~~~l~~~-----~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~--L~~i~~~ 482 (508)
.....+....... .........+.+++.+||+.+|++|||++|+++. +..+...
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~~~ 300 (337)
T cd07858 239 EKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLHDP 300 (337)
T ss_pred hhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhcCc
Confidence 0000000000000 0001224567899999999999999999999987 6665444
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati |
| >cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-31 Score=269.52 Aligned_cols=237 Identities=14% Similarity=0.157 Sum_probs=181.2
Q ss_pred HhhcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCC-CHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCe---
Q 045127 235 AATNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDV-SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRT--- 309 (508)
Q Consensus 235 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~--- 309 (508)
...++|+..+.||+|++|.||+|... +++.||+|++.... .......+.+|+.++++++|||++++.+++...+.
T Consensus 12 ~~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07851 12 EVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLED 91 (343)
T ss_pred cccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccc
Confidence 45678999999999999999999974 68899999986432 22345667889999999999999999988765544
Q ss_pred ---eEEEEeecCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC---
Q 045127 310 ---RAIVTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY--- 383 (508)
Q Consensus 310 ---~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~--- 383 (508)
.++|+||+ +++|.+++....+++..+..++.|++.||+|||+. |++||||||+||+++.++.++|+|||.+.
T Consensus 92 ~~~~~lv~e~~-~~~L~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~-gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~ 169 (343)
T cd07851 92 FQDVYLVTHLM-GADLNNIVKCQKLSDDHIQFLVYQILRGLKYIHSA-GIIHRDLKPSNIAVNEDCELKILDFGLARHTD 169 (343)
T ss_pred cccEEEEEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHeEECCCCCEEEcccccccccc
Confidence 89999998 67999999888899999999999999999999999 99999999999999999999999998642
Q ss_pred ----------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhcc------------ch
Q 045127 384 ----------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYP------------EN 429 (508)
Q Consensus 384 ----------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~------------~~ 429 (508)
.++.++|||||||++||+++|+.||....... .+.. +..... +.
T Consensus 170 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~-~~~~-i~~~~~~~~~~~~~~~~~~~ 247 (343)
T cd07851 170 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHID-QLKR-IMNLVGTPDEELLQKISSES 247 (343)
T ss_pred ccccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH-HHHH-HHHhcCCCCHHHHhhccchh
Confidence 23567999999999999999999996432111 1111 101000 00
Q ss_pred hhhhhhhcccC-Ccc----hHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 430 LQLVVDERMML-TEN----MFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 430 ~~~~~~~~l~~-~~~----~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
....+...... ... .......+.+++.+|++.||++|||+.||++.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h 298 (343)
T cd07851 248 ARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAH 298 (343)
T ss_pred HHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcC
Confidence 01111100000 000 01124578899999999999999999999864
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK |
| >KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.8e-34 Score=254.60 Aligned_cols=226 Identities=14% Similarity=0.154 Sum_probs=177.6
Q ss_pred hhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCC-CCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEE
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGD-VSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIV 313 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 313 (508)
.++.|+..+.||+|.|+.||++.. ++|+.+|+|+++.. .+....+++.+|+++-+.++||||+++.+.+.+....|+|
T Consensus 9 f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylv 88 (355)
T KOG0033|consen 9 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 88 (355)
T ss_pred cchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEE
Confidence 456778889999999999999986 67999999988632 2334678899999999999999999999999999999999
Q ss_pred EeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEec---CCCceEEeeccCC-------
Q 045127 314 TEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLT---DNLEPLISRFKIE------- 382 (508)
Q Consensus 314 ~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~---~~~~~kl~Dfg~~------- 382 (508)
+|+|+|++|..-+- ...+++..+-..+.||++||+|+|.+ +|||||+||+|+++- ..--+|++|||.+
T Consensus 89 Fe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n-~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~ 167 (355)
T KOG0033|consen 89 FDLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSN-GIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGE 167 (355)
T ss_pred EecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CceeccCChhheeeeeccCCCceeecccceEEEeCCcc
Confidence 99999999976554 44567888889999999999999999 999999999999995 3456899999763
Q ss_pred -------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcc
Q 045127 383 -------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTEN 443 (508)
Q Consensus 383 -------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 443 (508)
.+++..+||||.|||||-|+.|.+||.+..... +.+.+. ..-.++-.+.+
T Consensus 168 ~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~r--lye~I~----~g~yd~~~~~w----- 236 (355)
T KOG0033|consen 168 AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR--LYEQIK----AGAYDYPSPEW----- 236 (355)
T ss_pred ccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHH--HHHHHh----ccccCCCCccc-----
Confidence 356788999999999999999999997533221 111111 10011111111
Q ss_pred hHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 444 MFDQAEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 444 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
....++..+++.+|+..||++|.|+.|.++
T Consensus 237 -~~is~~Ak~LvrrML~~dP~kRIta~EAL~ 266 (355)
T KOG0033|consen 237 -DTVTPEAKSLIRRMLTVNPKKRITADEALK 266 (355)
T ss_pred -CcCCHHHHHHHHHHhccChhhhccHHHHhC
Confidence 112345567888999999999999998875
|
|
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.3e-31 Score=260.59 Aligned_cols=224 Identities=13% Similarity=0.119 Sum_probs=175.8
Q ss_pred CCCCCceeeecCCeEEEEEEE----CCCCEEEEEEecCCCC---HHHHHHHHHHHHHHhhc-CCCCccceeeEEecCCee
Q 045127 239 GFSKKNLVGKNEGAAIYKGIL----RDGTRVKIEIYKGDVS---REIRDEFVEECKLLVQF-QHKNLIRVLGWNNSRRTR 310 (508)
Q Consensus 239 ~~~~~~~lg~G~~g~V~~~~~----~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 310 (508)
+|+..+.||+|+||.||+|.. .+|..||+|++..... ....+.+.+|+.+++++ +|+||+++++.+..+...
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 477889999999999999986 3689999999864321 12356788999999999 599999999999988899
Q ss_pred EEEEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC------
Q 045127 311 AIVTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------ 383 (508)
Q Consensus 311 ~lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------ 383 (508)
++||||+++++|.+++. ...+++..+..++.|++.||+|||+. |++||||||+||+++.++.+||+|||++.
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~-~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~ 159 (290)
T cd05613 81 HLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKL-GIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDE 159 (290)
T ss_pred EEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHHHeEECCCCCEEEeeCccceeccccc
Confidence 99999999999999987 56688999999999999999999999 99999999999999999999999998642
Q ss_pred ------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhccc
Q 045127 384 ------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMM 439 (508)
Q Consensus 384 ------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 439 (508)
..+.++||||||+++|+|++|+.||..... .............. .+...
T Consensus 160 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~-~~~~~~~~~~~~~~------~~~~~ 232 (290)
T cd05613 160 VERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGE-KNSQAEISRRILKS------EPPYP 232 (290)
T ss_pred ccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCc-cccHHHHHHHhhcc------CCCCC
Confidence 124578999999999999999999863221 11111111111100 00000
Q ss_pred CCcchHHHHHHHHHHHHhcCCCCCCCCC-----CHHHHHHH
Q 045127 440 LTENMFDQAEQGLGLGLMCTDQPTGKLP-----SLVQIYNM 475 (508)
Q Consensus 440 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~ 475 (508)
......+.+++.+||+.||++|| +++++++.
T Consensus 233 -----~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~ 268 (290)
T cd05613 233 -----QEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKH 268 (290)
T ss_pred -----ccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcC
Confidence 11234567889999999999997 67777653
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.3e-31 Score=256.91 Aligned_cols=232 Identities=16% Similarity=0.180 Sum_probs=173.0
Q ss_pred CCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCH-HHHHHHHHHHHHHhhc---CCCCccceeeEEecCCe-----
Q 045127 240 FSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSR-EIRDEFVEECKLLVQF---QHKNLIRVLGWNNSRRT----- 309 (508)
Q Consensus 240 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l---~h~niv~~~~~~~~~~~----- 309 (508)
|+..+.||+|+||.||+|... +++.||+|.++..... .....+.+|+.+++++ +|||++++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 567789999999999999985 4899999999643322 2344566788777666 59999999999987766
Q ss_pred eEEEEeecCCCCHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC---
Q 045127 310 RAIVTEWTNGGNVELWLS---ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY--- 383 (508)
Q Consensus 310 ~~lv~e~~~~gsL~~~l~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~--- 383 (508)
.+++|||+.+ +|.+++. ...+++..+..++.|+++||+|||+. +++|+||+|+||+++.++.+||+|||.+.
T Consensus 81 ~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~-~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~ 158 (287)
T cd07838 81 LTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSH-RIVHRDLKPQNILVTSDGQVKIADFGLARIYS 158 (287)
T ss_pred eEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeccCChhhEEEccCCCEEEeccCcceecc
Confidence 8999999974 8988876 23589999999999999999999999 99999999999999999999999998642
Q ss_pred -----------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchh----------
Q 045127 384 -----------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENL---------- 430 (508)
Q Consensus 384 -----------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~---------- 430 (508)
.++.++|||||||++|||++|+.||...... ..+............
T Consensus 159 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (287)
T cd07838 159 FEMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEA-DQLDKIFDVIGLPSEEEWPRNVSLP 237 (287)
T ss_pred CCcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChH-HHHHHHHHHcCCCChHhcCCCcccc
Confidence 2355799999999999999999998753321 112222211110000
Q ss_pred hhhhhhcccC--CcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 431 QLVVDERMML--TENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 431 ~~~~~~~l~~--~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
.......... ..........+.+++.+||+.||++||++.|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 238 RSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred hhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 0000000000 0000122456778999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both |
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-31 Score=261.23 Aligned_cols=228 Identities=11% Similarity=0.112 Sum_probs=178.4
Q ss_pred CCCCCceeeecCCeEEEEEEE----CCCCEEEEEEecCCCC---HHHHHHHHHHHHHHhhc-CCCCccceeeEEecCCee
Q 045127 239 GFSKKNLVGKNEGAAIYKGIL----RDGTRVKIEIYKGDVS---REIRDEFVEECKLLVQF-QHKNLIRVLGWNNSRRTR 310 (508)
Q Consensus 239 ~~~~~~~lg~G~~g~V~~~~~----~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 310 (508)
+|+..+.||+|++|.||++.. .+++.||||.++.... ....+.+.+|+.++.++ +||||+++++.+..+...
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 477789999999999999985 3578899999864321 22356788999999999 599999999999998999
Q ss_pred EEEEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCCC-----
Q 045127 311 AIVTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEYQ----- 384 (508)
Q Consensus 311 ~lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~----- 384 (508)
++||||+++|+|.+++. ...+++..+..++.|+++||+|||+. +++||||||+||+++.++.++++|||++..
T Consensus 81 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~-~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 159 (288)
T cd05583 81 HLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQL-GIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEE 159 (288)
T ss_pred EEEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHHeEECCCCCEEEEECcccccccccc
Confidence 99999999999999987 56689999999999999999999999 999999999999999999999999986321
Q ss_pred -------------------------CCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhccc
Q 045127 385 -------------------------HRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMM 439 (508)
Q Consensus 385 -------------------------~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 439 (508)
.+.++||||||+++|||++|..||...... ........... .....
T Consensus 160 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~-~~~~~~~~~~~--------~~~~~ 230 (288)
T cd05583 160 EERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQ-NSQSEISRRIL--------KSKPP 230 (288)
T ss_pred ccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCccc-chHHHHHHHHH--------ccCCC
Confidence 345789999999999999999998632211 11111111110 00000
Q ss_pred CCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHH
Q 045127 440 LTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRA 479 (508)
Q Consensus 440 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i 479 (508)
.. ......+.+++.+||+.||++|||+.++.+.|...
T Consensus 231 ~~---~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~ 267 (288)
T cd05583 231 FP---KTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHP 267 (288)
T ss_pred CC---cccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCc
Confidence 00 11234567888999999999999998887776654
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3e-31 Score=267.31 Aligned_cols=234 Identities=13% Similarity=0.137 Sum_probs=175.6
Q ss_pred hcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecC--------
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSR-------- 307 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-------- 307 (508)
.++|+..+.||.|+||.||+|.. .+++.||+|.+..... ...+.+.+|++++++++||||+++++++...
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~-~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 82 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP-QSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDV 82 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCC-chHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccc
Confidence 36789999999999999999997 4689999999865433 3456788999999999999999999876543
Q ss_pred ------CeeEEEEeecCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEec-CCCceEEeecc
Q 045127 308 ------RTRAIVTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLT-DNLEPLISRFK 380 (508)
Q Consensus 308 ------~~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~-~~~~~kl~Dfg 380 (508)
...++||||++ ++|.+++....+++..+..++.||+.||.|||+. |++||||||+||+++ +++.+|++|||
T Consensus 83 ~~~~~~~~~~lv~e~~~-~~L~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~-givH~dikp~Nili~~~~~~~kl~dfg 160 (342)
T cd07854 83 GSLTELNSVYIVQEYME-TDLANVLEQGPLSEEHARLFMYQLLRGLKYIHSA-NVLHRDLKPANVFINTEDLVLKIGDFG 160 (342)
T ss_pred ccccccceEEEEeeccc-ccHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHEEEcCCCceEEECCcc
Confidence 35789999997 5999988877899999999999999999999999 999999999999998 45678999998
Q ss_pred CCC-------------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccc-
Q 045127 381 IEY-------------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPE- 428 (508)
Q Consensus 381 ~~~-------------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~- 428 (508)
.+. .++.++|||||||++|||++|+.||....... ........ .+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~-~~~~~~~~-~~~~ 238 (342)
T cd07854 161 LARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELE-QMQLILES-VPVV 238 (342)
T ss_pred cceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHh-cCCC
Confidence 642 13357899999999999999999996433211 11111110 000
Q ss_pred ------hhhhhhhhcc----cCCcch-----HHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 429 ------NLQLVVDERM----MLTENM-----FDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 429 ------~~~~~~~~~l----~~~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
.......... ...... ......+.+++.+|++.||.+|||+.|+++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 300 (342)
T cd07854 239 REEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMH 300 (342)
T ss_pred ChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCC
Confidence 0000000000 000000 0123567789999999999999999999853
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi |
| >KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-31 Score=248.41 Aligned_cols=245 Identities=15% Similarity=0.180 Sum_probs=187.0
Q ss_pred CCHHHHHHhhcCCCCCceeeecCCeEEEEEE-ECCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcC-CCCccceeeEEe
Q 045127 228 FTTWMLKAATNGFSKKNLVGKNEGAAIYKGI-LRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQ-HKNLIRVLGWNN 305 (508)
Q Consensus 228 ~~~~~l~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~ 305 (508)
-+++|+.+.|+ +.||+|+|+.|-.+. ..+|..+|||++.+. ....+.+..+|++++.+.+ |+||+++++||+
T Consensus 73 g~F~d~YkLt~-----e~LGeGAyasVqtcv~i~t~~EYAVKiidKq-~gHsR~RvfREVe~f~~Cqgh~nilqLiefFE 146 (463)
T KOG0607|consen 73 GKFEDMYKLTS-----ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQ-PGHSRSRVFREVETFYQCQGHKNILQLIEFFE 146 (463)
T ss_pred chHHHHHHhHH-----HHhcCccceeeeeeeeeccchhhhhhhhhcC-CchHHHHHHHHHHHHHHhcCCccHHHHHHHhc
Confidence 35677777775 789999999999988 478999999999655 3447889999999999995 999999999999
Q ss_pred cCCeeEEEEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCC---CceEEeeccC
Q 045127 306 SRRTRAIVTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDN---LEPLISRFKI 381 (508)
Q Consensus 306 ~~~~~~lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~---~~~kl~Dfg~ 381 (508)
++..+|+|||-|.||+|...+. ...+++.++.++..+|+.||+|||.+ ||.|||+||+|||-... .-+|||||.+
T Consensus 147 dd~~FYLVfEKm~GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~k-gIAHRDlKPENiLC~~pn~vsPvKiCDfDL 225 (463)
T KOG0607|consen 147 DDTRFYLVFEKMRGGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTK-GIAHRDLKPENILCESPNKVSPVKICDFDL 225 (463)
T ss_pred ccceEEEEEecccCchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhc-CcccccCCccceeecCCCCcCceeeecccc
Confidence 9999999999999999998887 77899999999999999999999999 99999999999998754 3589999933
Q ss_pred ---------------------------------------CCCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHH
Q 045127 382 ---------------------------------------EYQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYI 422 (508)
Q Consensus 382 ---------------------------------------~~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~ 422 (508)
+..|+.++|.||||||+|-|++|.+||.+.-..+- .|-
T Consensus 226 gSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dC---GWd 302 (463)
T KOG0607|consen 226 GSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADC---GWD 302 (463)
T ss_pred ccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcC---Ccc
Confidence 34677899999999999999999999976432211 111
Q ss_pred HHhccchhh-----hhhhhcccCCcchH-HHHHHHHHHHHhcCCCCCCCCCCHHHHHH--HHHHHHhh
Q 045127 423 RMHYPENLQ-----LVVDERMMLTENMF-DQAEQGLGLGLMCTDQPTGKLPSLVQIYN--MITRAYKS 482 (508)
Q Consensus 423 ~~~~~~~~~-----~~~~~~l~~~~~~~-~~~~~l~~l~~~Cl~~dP~~RPs~~evl~--~L~~i~~~ 482 (508)
+...-.... .+-+.....++..+ ....+..+++...+..|+.+|-++.++++ +...+.++
T Consensus 303 rGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~~~~~e 370 (463)
T KOG0607|consen 303 RGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQRCAPE 370 (463)
T ss_pred CCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCccccccchh
Confidence 110000011 11111111111111 22344556666677799999999999987 34444433
|
|
| >KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.8e-33 Score=253.07 Aligned_cols=221 Identities=14% Similarity=0.173 Sum_probs=179.8
Q ss_pred CCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhc-CCCCccceeeEEecCCeeEEEEeecCC
Q 045127 242 KKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQF-QHKNLIRVLGWNNSRRTRAIVTEWTNG 319 (508)
Q Consensus 242 ~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~ 319 (508)
....||.|+||+|+|-.+ +.|+..|||+++......+.+++..|.+...+- +.||||+++|++..++..+|-||.|.
T Consensus 68 dlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd- 146 (361)
T KOG1006|consen 68 DLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMD- 146 (361)
T ss_pred HHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHh-
Confidence 347799999999999987 579999999998777766788899999876665 69999999999999999999999995
Q ss_pred CCHHHHhc------cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC-----------
Q 045127 320 GNVELWLS------ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE----------- 382 (508)
Q Consensus 320 gsL~~~l~------~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~----------- 382 (508)
.|++.+.. +..+++...-.|..-.+.||.||-....|||||+||+|||++..|.+|+||||+.
T Consensus 147 ~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~SiAkT~ 226 (361)
T KOG1006|consen 147 ISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSIAKTV 226 (361)
T ss_pred hhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHhHHHHHHhhh
Confidence 58876655 6788999889999999999999998779999999999999999999999999873
Q ss_pred -----------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhh--h-cccCCc
Q 045127 383 -----------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVD--E-RMMLTE 442 (508)
Q Consensus 383 -----------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~l~~~~ 442 (508)
..++-++||||||++|||+.||+.||.....- -+.+..++. + .+....
T Consensus 227 daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~sv------------feql~~Vv~gdpp~l~~~~ 294 (361)
T KOG1006|consen 227 DAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSV------------FEQLCQVVIGDPPILLFDK 294 (361)
T ss_pred ccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHH------------HHHHHHHHcCCCCeecCcc
Confidence 23567899999999999999999999754321 122222221 1 222222
Q ss_pred chHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 443 NMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 443 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
...+-...+..++..|+-+|-+.||...++.+.
T Consensus 295 ~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 295 ECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKF 327 (361)
T ss_pred cccccCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence 223456778889999999999999999998765
|
|
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.9e-32 Score=290.80 Aligned_cols=225 Identities=17% Similarity=0.226 Sum_probs=173.6
Q ss_pred HHhhcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEec------
Q 045127 234 KAATNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNS------ 306 (508)
Q Consensus 234 ~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~------ 306 (508)
.+...+|++.+.||+||||.||+++.+ ||+.+|||++.-..+......+.+|+..+++|+|||||+++..+.+
T Consensus 475 SRY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~ 554 (1351)
T KOG1035|consen 475 SRYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELT 554 (1351)
T ss_pred hhHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccc
Confidence 467789999999999999999999974 8999999999765555567789999999999999999998754210
Q ss_pred -------------------------------------------------C------------------------------
Q 045127 307 -------------------------------------------------R------------------------------ 307 (508)
Q Consensus 307 -------------------------------------------------~------------------------------ 307 (508)
.
T Consensus 555 ~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS 634 (1351)
T KOG1035|consen 555 VLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTS 634 (1351)
T ss_pred cccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccc
Confidence 0
Q ss_pred ----------------------------------CeeEEEEeecCCCCHHHHhccCCC--CHHHHHHHHHHHHHHHHHHh
Q 045127 308 ----------------------------------RTRAIVTEWTNGGNVELWLSESAP--SWKHRLKVLIGVVEAMCYLQ 351 (508)
Q Consensus 308 ----------------------------------~~~~lv~e~~~~gsL~~~l~~~~l--~~~~~~~i~~~i~~~L~~LH 351 (508)
...||-||||+..++.++++...+ .....++++.+|++||+|+|
T Consensus 635 ~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH 714 (1351)
T KOG1035|consen 635 DSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIH 714 (1351)
T ss_pred ccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHH
Confidence 124788999999888888885555 37788999999999999999
Q ss_pred hCCCccccCCCCCCEEecCCCceEEeeccCC----------------------------------------------C--
Q 045127 352 EQWPEVDYDLRTGSVLLTDNLEPLISRFKIE----------------------------------------------Y-- 383 (508)
Q Consensus 352 ~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~----------------------------------------------~-- 383 (508)
++ |||||||||.||++|+++.+||+|||++ .
T Consensus 715 ~~-giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~ 793 (1351)
T KOG1035|consen 715 DQ-GIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSN 793 (1351)
T ss_pred hC-ceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccc
Confidence 99 9999999999999999999999999762 1
Q ss_pred CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCC-cchHHHHHHHHHHHHhcCCCC
Q 045127 384 QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLT-ENMFDQAEQGLGLGLMCTDQP 462 (508)
Q Consensus 384 ~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~l~~l~~~Cl~~d 462 (508)
.|+.|+|+||+|||++||+. ||...- +. ... +..+-+..++.+ ....++...-.+++.++++.|
T Consensus 794 ~Yn~KiDmYSLGIVlFEM~y---PF~TsM-ER---a~i--------L~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hd 858 (1351)
T KOG1035|consen 794 KYNSKIDMYSLGIVLFEMLY---PFGTSM-ER---ASI--------LTNLRKGSIPEPADFFDPEHPEEASLIRWLLSHD 858 (1351)
T ss_pred cccchhhhHHHHHHHHHHhc---cCCchH-HH---HHH--------HHhcccCCCCCCcccccccchHHHHHHHHHhcCC
Confidence 57789999999999999994 454211 00 001 111112222111 001223344456888999999
Q ss_pred CCCCCCHHHHHH
Q 045127 463 TGKLPSLVQIYN 474 (508)
Q Consensus 463 P~~RPs~~evl~ 474 (508)
|++||||.|+++
T Consensus 859 P~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 859 PSKRPTATELLN 870 (1351)
T ss_pred CccCCCHHHHhh
Confidence 999999999985
|
|
| >cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.4e-31 Score=262.88 Aligned_cols=235 Identities=14% Similarity=0.156 Sum_probs=173.7
Q ss_pred hcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCH-HHHHHHHHHHHHHhhcCCCCccceeeEEecC-------
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSR-EIRDEFVEECKLLVQFQHKNLIRVLGWNNSR------- 307 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------- 307 (508)
.++|+..+.||+|+||.||+|... +++.+|+|.+...... .....+.+|++++++++||||+++++++...
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 578999999999999999999974 6899999998643222 1234567899999999999999999987543
Q ss_pred -CeeEEEEeecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-
Q 045127 308 -RTRAIVTEWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY- 383 (508)
Q Consensus 308 -~~~~lv~e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~- 383 (508)
...++||||+.+ ++...+. ...+++..+..++.|+++||+|||+. |++||||||+||++++++.++++|||.+.
T Consensus 87 ~~~~~lv~~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~-~i~H~dl~p~nil~~~~~~~~l~dfg~~~~ 164 (311)
T cd07866 87 RGSVYMVTPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLEGINYLHEN-HILHRDIKAANILIDNQGILKIADFGLARP 164 (311)
T ss_pred CceEEEEEecCCc-CHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEECCCCCEEECcCccchh
Confidence 346999999965 6776665 45799999999999999999999999 99999999999999999999999997532
Q ss_pred --------------------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHh
Q 045127 384 --------------------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMH 425 (508)
Q Consensus 384 --------------------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~ 425 (508)
.++.++|||||||++|||++|+.||....... .........
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~-~~~~~~~~~ 243 (311)
T cd07866 165 YDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDID-QLHLIFKLC 243 (311)
T ss_pred ccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHh
Confidence 13457899999999999999999997433211 111111100
Q ss_pred c--cch-------hhhhhhhcc--cCCcc----hHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 426 Y--PEN-------LQLVVDERM--MLTEN----MFDQAEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 426 ~--~~~-------~~~~~~~~l--~~~~~----~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
. .+. .....+... ..... .......+.+++.+|++.||.+|||+.|++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 244 GTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE 307 (311)
T ss_pred CCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence 0 000 000000000 00000 0011256788999999999999999999875
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic |
| >PHA03210 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.6e-31 Score=279.21 Aligned_cols=239 Identities=11% Similarity=0.121 Sum_probs=165.4
Q ss_pred HhhcCCCCCceeeecCCeEEEEEEECC--CCEEEEEEec--------------C--CCCHHHHHHHHHHHHHHhhcCCCC
Q 045127 235 AATNGFSKKNLVGKNEGAAIYKGILRD--GTRVKIEIYK--------------G--DVSREIRDEFVEECKLLVQFQHKN 296 (508)
Q Consensus 235 ~~~~~~~~~~~lg~G~~g~V~~~~~~~--~~~vavK~~~--------------~--~~~~~~~~~~~~E~~~l~~l~h~n 296 (508)
...++|++.+.||+|+||.||++..+. +..+++|.+. . .........+.+|+.++++++|||
T Consensus 145 ~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~Hpn 224 (501)
T PHA03210 145 EFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHEN 224 (501)
T ss_pred hhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCC
Confidence 345789999999999999999987532 2222222110 0 011123456889999999999999
Q ss_pred ccceeeEEecCCeeEEEEeecCCCCHHHHhccC------CCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecC
Q 045127 297 LIRVLGWNNSRRTRAIVTEWTNGGNVELWLSES------APSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTD 370 (508)
Q Consensus 297 iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~------~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~ 370 (508)
|+++++++...+..|+|+|++. ++|..++... ......+..++.|++.||+|||++ ||+||||||+|||++.
T Consensus 225 Iv~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~-gIiHrDLKP~NILl~~ 302 (501)
T PHA03210 225 ILKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDK-KLIHRDIKLENIFLNC 302 (501)
T ss_pred cCcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEECC
Confidence 9999999999999999999985 5777776522 233556778999999999999999 9999999999999999
Q ss_pred CCceEEeeccCCC----------------------------CCCCcchhhHHHHHHHHHHhCCCC-CcccccC-cccHHH
Q 045127 371 NLEPLISRFKIEY----------------------------QHRSTKYVYKFGLFLLEMITNRRP-LEEFERG-EAGFIE 420 (508)
Q Consensus 371 ~~~~kl~Dfg~~~----------------------------~~~~~~Dv~SlGvil~elltg~~P-~~~~~~~-~~~~~~ 420 (508)
++.+||+|||++. .++.++|||||||++|||++|..+ +...... ...+.+
T Consensus 303 ~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~ 382 (501)
T PHA03210 303 DGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLK 382 (501)
T ss_pred CCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHH
Confidence 9999999998752 234578999999999999998754 4322111 111222
Q ss_pred HHHH------hccch---hhhhhhhc-ccCC-cchH------HHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 421 YIRM------HYPEN---LQLVVDER-MMLT-ENMF------DQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 421 ~~~~------~~~~~---~~~~~~~~-l~~~-~~~~------~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
.+.. .+++. +.+.++.. +... .... .....+.+++.+|++.||.+|||+.|+++.
T Consensus 383 ~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~h 454 (501)
T PHA03210 383 IIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLAL 454 (501)
T ss_pred HHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 1111 01110 11111110 0000 0000 012345667889999999999999999864
|
|
| >KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-31 Score=272.78 Aligned_cols=172 Identities=22% Similarity=0.387 Sum_probs=151.5
Q ss_pred CCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecC------CeeEE
Q 045127 240 FSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSR------RTRAI 312 (508)
Q Consensus 240 ~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------~~~~l 312 (508)
+...+.||+||||.||+|+. ..|+.||||.++........+...+|+++|++++|||||+++++-++. +...+
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vl 94 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVL 94 (732)
T ss_pred eeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceE
Confidence 45568899999999999996 579999999998776666788999999999999999999999986643 35689
Q ss_pred EEeecCCCCHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEec--CCC--ceEEeeccCC--
Q 045127 313 VTEWTNGGNVELWLS----ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLT--DNL--EPLISRFKIE-- 382 (508)
Q Consensus 313 v~e~~~~gsL~~~l~----~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~--~~~--~~kl~Dfg~~-- 382 (508)
|||||.+|||...+. ...+++.+.+.+..+++.||.|||++ ||+||||||.||++- ++| ..||+|||.+
T Consensus 95 vmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn-~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Are 173 (732)
T KOG4250|consen 95 VMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLREN-GIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARE 173 (732)
T ss_pred EEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHc-CceeccCCCCcEEEeecCCCceEEeeeccccccc
Confidence 999999999999998 56799999999999999999999999 999999999999984 333 4799999985
Q ss_pred -------------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccc
Q 045127 383 -------------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFE 412 (508)
Q Consensus 383 -------------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~ 412 (508)
+.++..+|.|||||++||.+||..||....
T Consensus 174 l~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~ 228 (732)
T KOG4250|consen 174 LDDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFG 228 (732)
T ss_pred CCCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCC
Confidence 345667899999999999999999997544
|
|
| >cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.6e-31 Score=256.13 Aligned_cols=231 Identities=16% Similarity=0.200 Sum_probs=177.3
Q ss_pred CCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCC-CHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEeec
Q 045127 240 FSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDV-SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWT 317 (508)
Q Consensus 240 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 317 (508)
|+..+.||+|++|.||+|... +++.||+|.+.... .....+.+..|+.++++++|+|++++++++...+..++||||+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 556788999999999999974 58999999997543 2223567789999999999999999999999999999999999
Q ss_pred CCCCHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC------------
Q 045127 318 NGGNVELWLSE--SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------------ 383 (508)
Q Consensus 318 ~~gsL~~~l~~--~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------------ 383 (508)
+ ++|.+++.. ..+++..+..++.|++.||+|||+. |++||||+|+||++++++.++|+|||.+.
T Consensus 81 ~-~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~-~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~ 158 (282)
T cd07829 81 D-MDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSH-RILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYTHE 158 (282)
T ss_pred C-cCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCChheEEEcCCCCEEEecCCcccccCCCccccCcc
Confidence 7 589999984 4799999999999999999999999 99999999999999999999999997631
Q ss_pred ----------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhcc---ch-hhhh-----hhhcc
Q 045127 384 ----------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYP---EN-LQLV-----VDERM 438 (508)
Q Consensus 384 ----------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~---~~-~~~~-----~~~~l 438 (508)
.++.++|||||||++||+++|+.||......+ .+.. +..... +. .... .+...
T Consensus 159 ~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (282)
T cd07829 159 VVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEID-QLFK-IFQILGTPTEESWPGVTKLPDYKPTF 236 (282)
T ss_pred ccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHH-HHHH-HHHHhCCCcHHHHHhhcccccccccc
Confidence 34567899999999999999999986533111 0111 100000 00 0000 00000
Q ss_pred cCCc------chHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 439 MLTE------NMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 439 ~~~~------~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
.... ........+.+++.+||+.||++||++.+++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 237 PKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred cccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 0000 00011456889999999999999999999976
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the |
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.2e-31 Score=257.90 Aligned_cols=220 Identities=12% Similarity=0.144 Sum_probs=178.5
Q ss_pred cCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCC--CHHHHHHHHHHHHHHhhcC-CCCccceeeEEecCCeeEEE
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDV--SREIRDEFVEECKLLVQFQ-HKNLIRVLGWNNSRRTRAIV 313 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv 313 (508)
++|...+.||+|++|.||+|... +++.||+|++.... .....+.+.+|..++++++ ||||+++++++...+..++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 46888899999999999999974 68999999986422 2234567889999999998 99999999999999999999
Q ss_pred EeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC---------
Q 045127 314 TEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY--------- 383 (508)
Q Consensus 314 ~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~--------- 383 (508)
|||+++++|.+++. ...+++..+..++.|++.||+|||+. |++|+||+|+||+++.++.++++|||.+.
T Consensus 81 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~-~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~ 159 (280)
T cd05581 81 LEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSK-GIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPE 159 (280)
T ss_pred EcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCCHHHeEECCCCCEEecCCccccccCCccccc
Confidence 99999999999998 44899999999999999999999999 99999999999999999999999998632
Q ss_pred --------------------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHh
Q 045127 384 --------------------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMH 425 (508)
Q Consensus 384 --------------------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~ 425 (508)
..+.++||||||++++++++|+.||...... ....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-----~~~~-- 232 (280)
T cd05581 160 SNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEY-----LTFQ-- 232 (280)
T ss_pred cCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHH-----HHHH--
Confidence 1245789999999999999999999743211 0010
Q ss_pred ccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCH----HHHHH
Q 045127 426 YPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSL----VQIYN 474 (508)
Q Consensus 426 ~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~----~evl~ 474 (508)
.......... ......+.+++.+||+.+|++|||+ +++++
T Consensus 233 ------~~~~~~~~~~---~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 233 ------KILKLEYSFP---PNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred ------HHHhcCCCCC---CccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 0111111000 1114567789999999999999999 77764
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >PTZ00024 cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.6e-31 Score=265.19 Aligned_cols=235 Identities=11% Similarity=0.083 Sum_probs=176.1
Q ss_pred hcCCCC-CceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCHH-------------HHHHHHHHHHHHhhcCCCCcccee
Q 045127 237 TNGFSK-KNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSRE-------------IRDEFVEECKLLVQFQHKNLIRVL 301 (508)
Q Consensus 237 ~~~~~~-~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~-------------~~~~~~~E~~~l~~l~h~niv~~~ 301 (508)
.++|.. .+.||+|+||.||+|... +++.||+|.+....... ....+.+|++++++++||||++++
T Consensus 7 ~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~ 86 (335)
T PTZ00024 7 SERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLV 86 (335)
T ss_pred ccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeee
Confidence 345653 577999999999999974 68999999986432221 012477899999999999999999
Q ss_pred eEEecCCeeEEEEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeecc
Q 045127 302 GWNNSRRTRAIVTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFK 380 (508)
Q Consensus 302 ~~~~~~~~~~lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg 380 (508)
+++..++..++||||+. |+|.+++. ...+++.....++.|++.||+|||+. |++||||+|+||+++.++.++++|||
T Consensus 87 ~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~-~i~H~dl~~~nill~~~~~~kl~dfg 164 (335)
T PTZ00024 87 DVYVEGDFINLVMDIMA-SDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKW-YFMHRDLSPANIFINSKGICKIADFG 164 (335)
T ss_pred EEEecCCcEEEEEeccc-cCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC-CeecccccHHHeEECCCCCEEECCcc
Confidence 99999999999999997 58998887 56789999999999999999999999 99999999999999999999999998
Q ss_pred CCC------------------------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccH
Q 045127 381 IEY------------------------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGF 418 (508)
Q Consensus 381 ~~~------------------------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~ 418 (508)
.+. .++.++|||||||++|||++|+.||......+ .
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~--~ 242 (335)
T PTZ00024 165 LARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEID--Q 242 (335)
T ss_pred ceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH--H
Confidence 532 13557899999999999999999997543211 1
Q ss_pred HHHHHHhcc----chhhhhhh-----hccc-CCcc----hHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 419 IEYIRMHYP----ENLQLVVD-----ERMM-LTEN----MFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 419 ~~~~~~~~~----~~~~~~~~-----~~l~-~~~~----~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
...+..... .......+ +... .... .......+.+++.+|++.+|++|||++|++..
T Consensus 243 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~ 313 (335)
T PTZ00024 243 LGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKH 313 (335)
T ss_pred HHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcC
Confidence 111111000 00000000 0000 0000 00124567789999999999999999999863
|
|
| >KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-30 Score=279.28 Aligned_cols=229 Identities=19% Similarity=0.316 Sum_probs=190.1
Q ss_pred cCCCCCceeeecCCeEEEEEEEC----C----CCEEEEEEecCCCCHHHHHHHHHHHHHHhhc-CCCCccceeeEEecCC
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILR----D----GTRVKIEIYKGDVSREIRDEFVEECKLLVQF-QHKNLIRVLGWNNSRR 308 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~----~----~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 308 (508)
++.+..+.||+|.||.|++|... . ...||||.++......+.+.+..|+++|+.+ +|+||+.++|++..++
T Consensus 296 ~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~ 375 (609)
T KOG0200|consen 296 ENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDG 375 (609)
T ss_pred hhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCC
Confidence 34455669999999999999852 1 4579999998777667889999999999999 5999999999999988
Q ss_pred eeEEEEeecCCCCHHHHhccCC-----------------CCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCC
Q 045127 309 TRAIVTEWTNGGNVELWLSESA-----------------PSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDN 371 (508)
Q Consensus 309 ~~~lv~e~~~~gsL~~~l~~~~-----------------l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~ 371 (508)
..++|+||++.|+|..+++..+ ++..+.+.++.|||.|++||++. +++|||+-.+|||++++
T Consensus 376 ~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~-~~vHRDLAaRNVLi~~~ 454 (609)
T KOG0200|consen 376 PLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV-PCVHRDLAARNVLITKN 454 (609)
T ss_pred ceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC-CccchhhhhhhEEecCC
Confidence 9999999999999999999555 88999999999999999999999 99999999999999999
Q ss_pred CceEEeeccCCC------------------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHH
Q 045127 372 LEPLISRFKIEY------------------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIE 420 (508)
Q Consensus 372 ~~~kl~Dfg~~~------------------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~ 420 (508)
..+||+|||+++ .++.++|||||||+|||++| |..||.+.... ..+.+
T Consensus 455 ~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~-~~l~~ 533 (609)
T KOG0200|consen 455 KVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPT-EELLE 533 (609)
T ss_pred CEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcH-HHHHH
Confidence 999999999853 35678999999999999999 88999753211 11222
Q ss_pred HHHHhccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHh
Q 045127 421 YIRMHYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYK 481 (508)
Q Consensus 421 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~ 481 (508)
+++... ++. ....+..++.+++..||+.+|++||++.++.+.++....
T Consensus 534 ~l~~G~----------r~~---~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l~ 581 (609)
T KOG0200|consen 534 FLKEGN----------RME---QPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHLQ 581 (609)
T ss_pred HHhcCC----------CCC---CCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHHH
Confidence 332222 111 112335677789999999999999999999999998654
|
|
| >cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-30 Score=251.39 Aligned_cols=220 Identities=15% Similarity=0.181 Sum_probs=171.2
Q ss_pred CCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCC----CCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEE
Q 045127 239 GFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGD----VSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIV 313 (508)
Q Consensus 239 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~----~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 313 (508)
+|...+.||+|+||.||++... .+..+++|..+.. ........+.+|+.++++++||||+++++++.+....++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 4778899999999999999874 3455666665431 1222345677899999999999999999999988899999
Q ss_pred EeecCCCCHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-----
Q 045127 314 TEWTNGGNVELWLS-----ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY----- 383 (508)
Q Consensus 314 ~e~~~~gsL~~~l~-----~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~----- 383 (508)
|||+++++|.+++. ...+++..+..++.|+++||.|||+. |++|+||||+||+++. +.++++|||.+.
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~-~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~ 158 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQR-RILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGS 158 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc-CccccCCChhheEeec-CCEeecccCceeecCCC
Confidence 99999999998875 45789999999999999999999999 9999999999999975 569999998531
Q ss_pred ----------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCC
Q 045127 384 ----------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLT 441 (508)
Q Consensus 384 ----------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 441 (508)
.++.++|+||||+++|+|++|..||.... ........... ..+..
T Consensus 159 ~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~-----~~~~~~~~~~~-----~~~~~--- 225 (260)
T cd08222 159 CDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQN-----FLSVVLRIVEG-----PTPSL--- 225 (260)
T ss_pred cccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCcc-----HHHHHHHHHcC-----CCCCC---
Confidence 23457999999999999999999986321 11111111100 00111
Q ss_pred cchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 442 ENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 442 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
.......+.+++.+||..+|++||++.|+++.
T Consensus 226 --~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 257 (260)
T cd08222 226 --PETYSRQLNSIMQSMLNKDPSLRPSAAEILRN 257 (260)
T ss_pred --cchhcHHHHHHHHHHhcCChhhCcCHHHHhhC
Confidence 11234567789999999999999999999863
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check |
| >KOG0586 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.4e-31 Score=264.83 Aligned_cols=225 Identities=17% Similarity=0.197 Sum_probs=183.0
Q ss_pred HHhhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCH-HHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeE
Q 045127 234 KAATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSR-EIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRA 311 (508)
Q Consensus 234 ~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 311 (508)
...++.|.+...||+|.|+.|..|++ .++..||||.+.+.... ...+.+.+|+++|+.++|||||+++.+...+...|
T Consensus 52 ~~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~ly 131 (596)
T KOG0586|consen 52 SNSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLY 131 (596)
T ss_pred cccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeE
Confidence 45678899999999999999999997 46899999999755433 34566899999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-------
Q 045127 312 IVTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------- 383 (508)
Q Consensus 312 lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------- 383 (508)
+||||+.+|.+.+++. .+++.+..+..++.|+.+|++|+|++ +|+|||||++||+++.+.++||+|||++.
T Consensus 132 lV~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k-~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~~~ 210 (596)
T KOG0586|consen 132 LVMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSK-NIVHRDLKAENILLDENMNIKIADFGFSTFFDYGLM 210 (596)
T ss_pred EEEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhc-ceeccccchhhcccccccceeeeccccceeeccccc
Confidence 9999999999999998 66777788999999999999999999 99999999999999999999999998852
Q ss_pred --------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcc
Q 045127 384 --------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTEN 443 (508)
Q Consensus 384 --------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 443 (508)
...+++|+||+|+++|-|+.|..||++..-.+ .- ...+...+.-+.
T Consensus 211 lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~-----Lr--------~rvl~gk~rIp~- 276 (596)
T KOG0586|consen 211 LQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKE-----LR--------PRVLRGKYRIPF- 276 (596)
T ss_pred ccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCccccc-----cc--------chheeeeecccc-
Confidence 23578999999999999999999998532110 00 001111111110
Q ss_pred hHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 444 MFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 444 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
-...++-+++.+.+-.+|.+|++++++.+.
T Consensus 277 --~ms~dce~lLrk~lvl~Pskr~~~dqim~~ 306 (596)
T KOG0586|consen 277 --YMSCDCEDLLRKFLVLNPSKRGPCDQIMKD 306 (596)
T ss_pred --eeechhHHHHHHhhccCccccCCHHHhhhh
Confidence 012234457777888999999999999875
|
|
| >KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-32 Score=293.36 Aligned_cols=225 Identities=20% Similarity=0.259 Sum_probs=178.1
Q ss_pred HhhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCC-CHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEE
Q 045127 235 AATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDV-SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAI 312 (508)
Q Consensus 235 ~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 312 (508)
..+-+++...+||.|.||.||.|.. .+|+..|+|-++-.. .....+.+.+|+.++..++|||+|+++|+-...+..+|
T Consensus 1232 nV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~I 1311 (1509)
T KOG4645|consen 1232 NVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYI 1311 (1509)
T ss_pred cceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHH
Confidence 3445778889999999999999995 679999999886332 23356678899999999999999999999999999999
Q ss_pred EEeecCCCCHHHHhccC-CCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCCC-------
Q 045127 313 VTEWTNGGNVELWLSES-APSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEYQ------- 384 (508)
Q Consensus 313 v~e~~~~gsL~~~l~~~-~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~------- 384 (508)
.||||++|+|.+.++.+ ..++.....+..|++.|++|||++ |||||||||.||+++.+|.+|.+|||.+..
T Consensus 1312 FMEyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~-gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~ 1390 (1509)
T KOG4645|consen 1312 FMEYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEH-GIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQT 1390 (1509)
T ss_pred HHHHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhc-CceecCCCccceeeecCCcEEeecccceeEecCchhc
Confidence 99999999999999844 455556667888999999999999 999999999999999999999999987522
Q ss_pred ---------------------------CCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhc
Q 045127 385 ---------------------------HRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDER 437 (508)
Q Consensus 385 ---------------------------~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (508)
-..++||||+||++.||+||+.||....++-..+....... .|.
T Consensus 1391 ~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~gh---------~Pq 1461 (1509)
T KOG4645|consen 1391 MPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAGH---------KPQ 1461 (1509)
T ss_pred CCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhccC---------CCC
Confidence 12467999999999999999999987654432111111111 111
Q ss_pred ccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 438 MMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 438 l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
++ ..-..+-.+++.+|++.||++|.++.|+++
T Consensus 1462 ~P-----~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle 1493 (1509)
T KOG4645|consen 1462 IP-----ERLSSEGRDFLEHCLEQDPKMRWTASQLLE 1493 (1509)
T ss_pred Cc-----hhhhHhHHHHHHHHHhcCchhhhHHHHHHH
Confidence 11 112344557888999999999988876654
|
|
| >cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.7e-30 Score=256.97 Aligned_cols=233 Identities=14% Similarity=0.150 Sum_probs=171.6
Q ss_pred CCCCCceeeecCCeEEEEEEEC-C--CCEEEEEEecCCCCH-HHHHHHHHHHHHHhhc-CCCCccceeeEEec----CCe
Q 045127 239 GFSKKNLVGKNEGAAIYKGILR-D--GTRVKIEIYKGDVSR-EIRDEFVEECKLLVQF-QHKNLIRVLGWNNS----RRT 309 (508)
Q Consensus 239 ~~~~~~~lg~G~~g~V~~~~~~-~--~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~----~~~ 309 (508)
+|+..+.||+|+||.||++... . +..||+|.+...... ...+.+.+|+++++++ +||||+++++++.. ...
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 4777899999999999999974 3 789999998643222 2356788999999999 59999999987542 245
Q ss_pred eEEEEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-----
Q 045127 310 RAIVTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY----- 383 (508)
Q Consensus 310 ~~lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~----- 383 (508)
.++++||+. ++|.+++. ...+++..+..++.|++.||+|||+. |++||||||+||+++.++.+||+|||.+.
T Consensus 81 ~~~~~e~~~-~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~-givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~ 158 (332)
T cd07857 81 LYLYEELME-ADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSA-NVLHRDLKPGNLLVNADCELKICDFGLARGFSEN 158 (332)
T ss_pred EEEEEeccc-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHeEEcCCCCEEeCcCCCceecccc
Confidence 688899886 68988886 67789999999999999999999999 99999999999999999999999998642
Q ss_pred ---------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhcc---ch-hhh
Q 045127 384 ---------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYP---EN-LQL 432 (508)
Q Consensus 384 ---------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~---~~-~~~ 432 (508)
.++.++||||+|+++|++++|+.||...... ........... +. ...
T Consensus 159 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~ 236 (332)
T cd07857 159 PGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYV--DQLNQILQVLGTPDEETLSR 236 (332)
T ss_pred cccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHH--HHHHHHHHHhCCCCHHHHHh
Confidence 2345689999999999999999998743211 11111110000 00 000
Q ss_pred hhhhc-------c-cCCcc-----hHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 433 VVDER-------M-MLTEN-----MFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 433 ~~~~~-------l-~~~~~-----~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
..++. . ..... .......+.+++.+|++.||.+|||+.|+++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~ 292 (332)
T cd07857 237 IGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEH 292 (332)
T ss_pred hhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 00000 0 00000 00113567889999999999999999999754
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co |
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.6e-30 Score=246.38 Aligned_cols=209 Identities=17% Similarity=0.164 Sum_probs=169.5
Q ss_pred eeecCCeEEEEEEEC-CCCEEEEEEecCCCC--HHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEeecCCCCH
Q 045127 246 VGKNEGAAIYKGILR-DGTRVKIEIYKGDVS--REIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWTNGGNV 322 (508)
Q Consensus 246 lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 322 (508)
||+|+||.||++... +++.+++|.+..... ......+..|+.++++++||||+++++.+..+...+++|||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 689999999999974 589999999865432 22466789999999999999999999999999999999999999999
Q ss_pred HHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC------------------
Q 045127 323 ELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------------------ 383 (508)
Q Consensus 323 ~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------------------ 383 (508)
.+++. ...+++..+..++.|++.|+.|||+. +++|+||+|+||+++.++.++++|||.+.
T Consensus 81 ~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~-~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~ 159 (250)
T cd05123 81 FSHLSKEGRFSEERARFYAAEIVLALEYLHSL-GIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFCGTPEY 159 (250)
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCCcCCccc
Confidence 99998 44789999999999999999999999 99999999999999999999999998642
Q ss_pred ---------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHHHHHHHH
Q 045127 384 ---------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQAEQGLGL 454 (508)
Q Consensus 384 ---------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l 454 (508)
..+.++|+||||+++|++++|+.||..... ........ ...+.... .....+.++
T Consensus 160 ~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~-----~~~~~~~~--------~~~~~~~~---~~~~~l~~~ 223 (250)
T cd05123 160 LAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR-----KEIYEKIL--------KDPLRFPE---FLSPEARDL 223 (250)
T ss_pred cChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH-----HHHHHHHh--------cCCCCCCC---CCCHHHHHH
Confidence 124579999999999999999999964322 11111111 11111111 114566789
Q ss_pred HHhcCCCCCCCCCCHHH
Q 045127 455 GLMCTDQPTGKLPSLVQ 471 (508)
Q Consensus 455 ~~~Cl~~dP~~RPs~~e 471 (508)
+.+||..||++||++.+
T Consensus 224 i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 224 ISGLLQKDPTKRLGSGG 240 (250)
T ss_pred HHHHhcCCHhhCCCccc
Confidence 99999999999999943
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-31 Score=244.99 Aligned_cols=226 Identities=12% Similarity=0.157 Sum_probs=174.9
Q ss_pred HhhcCCCCC-ceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhc-CCCCccceeeEEec----C
Q 045127 235 AATNGFSKK-NLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQF-QHKNLIRVLGWNNS----R 307 (508)
Q Consensus 235 ~~~~~~~~~-~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~----~ 307 (508)
..+++|++. ++||-|-.|.|-.+.. .+++.+|+|++.+ .....+|++..-.. .|||||.++++|+. .
T Consensus 58 ~itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~D------s~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~r 131 (400)
T KOG0604|consen 58 SITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLD------SPKARREVELHWMASGHPHIVSIIDVYENSYQGR 131 (400)
T ss_pred cchhhheehhhhhccccCCceEEEEeccchhhhHHHHHhc------CHHHHhHhhhhhhhcCCCceEEeehhhhhhccCc
Confidence 356677654 6899999999999987 4689999999953 24456888876666 59999999999874 3
Q ss_pred CeeEEEEeecCCCCHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEec---CCCceEEeeccC
Q 045127 308 RTRAIVTEWTNGGNVELWLS---ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLT---DNLEPLISRFKI 381 (508)
Q Consensus 308 ~~~~lv~e~~~~gsL~~~l~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~---~~~~~kl~Dfg~ 381 (508)
....+|||.|+||.|...++ ...+++.++..|+.||+.|+.|||+. +|.||||||+|+|.+ .+..+|++|||+
T Consensus 132 kcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~-nIAHRDlKpENLLyt~t~~na~lKLtDfGF 210 (400)
T KOG0604|consen 132 KCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSM-NIAHRDLKPENLLYTTTSPNAPLKLTDFGF 210 (400)
T ss_pred eeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhc-chhhccCChhheeeecCCCCcceEeccccc
Confidence 45689999999999999998 45699999999999999999999999 999999999999997 456899999998
Q ss_pred CC--------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhh
Q 045127 382 EY--------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVD 435 (508)
Q Consensus 382 ~~--------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (508)
++ +|+..+|+||+||++|-|++|.+||..... ..+..-++..+...-.++-+
T Consensus 211 AK~t~~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg--~aispgMk~rI~~gqy~FP~ 288 (400)
T KOG0604|consen 211 AKETQEPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG--LAISPGMKRRIRTGQYEFPE 288 (400)
T ss_pred ccccCCCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCC--ccCChhHHhHhhccCccCCC
Confidence 63 345678999999999999999999975432 22222222222221112212
Q ss_pred hcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 436 ERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 436 ~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
+.+ .+..+...+++...+..+|.+|-|+.++++.
T Consensus 289 pEW------s~VSe~aKdlIR~LLkt~PteRlTI~~~m~h 322 (400)
T KOG0604|consen 289 PEW------SCVSEAAKDLIRKLLKTEPTERLTIEEVMDH 322 (400)
T ss_pred hhH------hHHHHHHHHHHHHHhcCCchhheeHHHhhcC
Confidence 211 2335556677888889999999999999875
|
|
| >KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-30 Score=228.88 Aligned_cols=183 Identities=14% Similarity=0.190 Sum_probs=157.9
Q ss_pred hhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhc-CCCCccceeeEEecCCeeEEE
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQF-QHKNLIRVLGWNNSRRTRAIV 313 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv 313 (508)
..++......||+|++|.|-+-++ .+|+..|+|.+......+..++..+|+++..+. .+|.+|.++|...+....+|.
T Consensus 44 ~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIc 123 (282)
T KOG0984|consen 44 PADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWIC 123 (282)
T ss_pred chhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEe
Confidence 344455568899999999998886 689999999998777777788899999987665 799999999999988999999
Q ss_pred EeecCCCCHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC------
Q 045127 314 TEWTNGGNVELWLS-----ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE------ 382 (508)
Q Consensus 314 ~e~~~~gsL~~~l~-----~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~------ 382 (508)
||.|. .||+.+-. +..+++...-+|+..+.+||.|||++..++|||+||+||||+.+|.+|+||||.+
T Consensus 124 ME~M~-tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dS 202 (282)
T KOG0984|consen 124 MELMD-TSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDS 202 (282)
T ss_pred HHHhh-hhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccccceeehhh
Confidence 99995 48887765 6788999999999999999999999989999999999999999999999999874
Q ss_pred ------------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHH
Q 045127 383 ------------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFI 419 (508)
Q Consensus 383 ------------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~ 419 (508)
..|+-++||||||+++.||.+++.||+.....-..+.
T Consensus 203 iAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLk 263 (282)
T KOG0984|consen 203 IAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLK 263 (282)
T ss_pred hHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHH
Confidence 2567799999999999999999999986554433333
|
|
| >cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-29 Score=241.81 Aligned_cols=195 Identities=14% Similarity=0.056 Sum_probs=155.6
Q ss_pred cCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEeecCCCCHHHHhc
Q 045127 249 NEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWTNGGNVELWLS 327 (508)
Q Consensus 249 G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~ 327 (508)
|.+|.||++.. .+++.+|+|.+.... .+.+|...+....||||+++++++...+..+++|||+++|+|.+++.
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~ 77 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS------EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHIS 77 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh------hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHH
Confidence 88999999997 568999999996432 23345555556679999999999999999999999999999999886
Q ss_pred -cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC------------------------
Q 045127 328 -ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE------------------------ 382 (508)
Q Consensus 328 -~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~------------------------ 382 (508)
...+++..+..++.|+++||+|||+. +++||||||+||+++.++.++++|||..
T Consensus 78 ~~~~l~~~~~~~~~~ql~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~y~aPE~~~~ 156 (237)
T cd05576 78 KFLNIPEECVKRWAAEMVVALDALHRE-GIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCDGEAVENMYCAPEVGGI 156 (237)
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHHHEEEcCCCCEEEecccchhccccccccCCcCccccCCcccCC
Confidence 55789999999999999999999999 9999999999999999999999999852
Q ss_pred CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCC
Q 045127 383 YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQP 462 (508)
Q Consensus 383 ~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~d 462 (508)
..++.++||||+|+++|||++|+.|+....... .......+. ......+.+++.+|++.|
T Consensus 157 ~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~---------------~~~~~~~~~-----~~~~~~~~~li~~~l~~d 216 (237)
T cd05576 157 SEETEACDWWSLGAILFELLTGKTLVECHPSGI---------------NTHTTLNIP-----EWVSEEARSLLQQLLQFN 216 (237)
T ss_pred CCCCchhhHHHHHHHHHHHHHCcchhhcCchhc---------------ccccccCCc-----ccCCHHHHHHHHHHccCC
Confidence 234567999999999999999998875321100 000000010 012345678899999999
Q ss_pred CCCCCCHH
Q 045127 463 TGKLPSLV 470 (508)
Q Consensus 463 P~~RPs~~ 470 (508)
|++||++.
T Consensus 217 p~~R~~~~ 224 (237)
T cd05576 217 PTERLGAG 224 (237)
T ss_pred HHHhcCCC
Confidence 99999973
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha |
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.8e-29 Score=272.00 Aligned_cols=144 Identities=15% Similarity=0.200 Sum_probs=129.9
Q ss_pred hcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCC--CHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEE
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDV--SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIV 313 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 313 (508)
.++|.+.++||+|+||.||+|... +++.||+|+++... .......+..|+.+++.++||||+++++++......|+|
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lV 82 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLV 82 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEE
Confidence 367889999999999999999975 68999999996432 233457789999999999999999999999999999999
Q ss_pred EeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccC
Q 045127 314 TEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKI 381 (508)
Q Consensus 314 ~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~ 381 (508)
|||+++++|.+++. ...+++..+..|+.||+.||+|||++ +|+||||||+|||++.++.+||+|||+
T Consensus 83 mEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~-gIiHrDLKP~NILl~~~g~vkL~DFGl 150 (669)
T cd05610 83 MEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRH-GIIHRDLKPDNMLISNEGHIKLTDFGL 150 (669)
T ss_pred EeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC-CEEeCCccHHHEEEcCCCCEEEEeCCC
Confidence 99999999999987 56789999999999999999999999 999999999999999999999999975
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription] | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.2e-30 Score=236.43 Aligned_cols=174 Identities=15% Similarity=0.229 Sum_probs=149.4
Q ss_pred hhcCCCCCceeeecCCeEEEEEEEC---C--CCEEEEEEecCCCCH-HHHHHHHHHHHHHhhcCCCCccceeeEEec-CC
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGILR---D--GTRVKIEIYKGDVSR-EIRDEFVEECKLLVQFQHKNLIRVLGWNNS-RR 308 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~~---~--~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~ 308 (508)
....|+....||+|.||.||+|.-. + ...+|+|.++..... .......+|+..++.++|||++.+..++.+ +.
T Consensus 22 ~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~ 101 (438)
T KOG0666|consen 22 DLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDK 101 (438)
T ss_pred HHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCc
Confidence 3457889999999999999999743 2 237899999755332 234567899999999999999999998877 77
Q ss_pred eeEEEEeecCCCCHHHHhc------cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCC----CceEEee
Q 045127 309 TRAIVTEWTNGGNVELWLS------ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDN----LEPLISR 378 (508)
Q Consensus 309 ~~~lv~e~~~~gsL~~~l~------~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~----~~~kl~D 378 (508)
..++++||.+. +|.+.++ ...++...+..|++||+.|+.|||++ =|+|||+||.|||+..+ |.+||+|
T Consensus 102 ~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~N-WvlHRDLKPaNIlvmgdgperG~VKIaD 179 (438)
T KOG0666|consen 102 KVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSN-WVLHRDLKPANILVMGDGPERGRVKIAD 179 (438)
T ss_pred eEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhh-heeeccCCcceEEEeccCCccCeeEeec
Confidence 88999999987 8998887 45788999999999999999999999 89999999999999877 9999999
Q ss_pred ccCC-------------------------------CCCCCcchhhHHHHHHHHHHhCCCCCccc
Q 045127 379 FKIE-------------------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEF 411 (508)
Q Consensus 379 fg~~-------------------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~ 411 (508)
||++ +.||++.||||.|||+.||+|-++-|...
T Consensus 180 lGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~ 243 (438)
T KOG0666|consen 180 LGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGR 243 (438)
T ss_pred ccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccch
Confidence 9873 56889999999999999999988777653
|
|
| >KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-29 Score=216.57 Aligned_cols=171 Identities=14% Similarity=0.235 Sum_probs=148.8
Q ss_pred CCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCH-HHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEee
Q 045127 239 GFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSR-EIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEW 316 (508)
Q Consensus 239 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 316 (508)
.|+..++||+|.||+||+|+. .+++.||+|..+-+... .......+|+.+++.++|+|||++++....+....+|+||
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~ 82 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence 566778999999999999995 56899999999744332 2345678999999999999999999999999999999999
Q ss_pred cCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-----------
Q 045127 317 TNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY----------- 383 (508)
Q Consensus 317 ~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~----------- 383 (508)
|.. +|..+.. .+.++.+.+..++.|+++||.|.|++ ++.|||+||.|.+|+.+|+.|++|||+++
T Consensus 83 cdq-dlkkyfdslng~~d~~~~rsfmlqllrgl~fchsh-nvlhrdlkpqnllin~ngelkladfglarafgipvrcysa 160 (292)
T KOG0662|consen 83 CDQ-DLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSH-NVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSA 160 (292)
T ss_pred hhH-HHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhh-hhhhccCCcceEEeccCCcEEecccchhhhcCCceEeeec
Confidence 965 8888877 78899999999999999999999999 99999999999999999999999998842
Q ss_pred -----------------CCCCcchhhHHHHHHHHHHh-CCCCCccc
Q 045127 384 -----------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEF 411 (508)
Q Consensus 384 -----------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~ 411 (508)
-|++..|+||-|||+.|+.. |++.|.+.
T Consensus 161 evvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~ 206 (292)
T KOG0662|consen 161 EVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGN 206 (292)
T ss_pred eeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCC
Confidence 35677899999999999987 55555543
|
|
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-29 Score=269.04 Aligned_cols=179 Identities=16% Similarity=0.156 Sum_probs=159.9
Q ss_pred HHHHHhhcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCC--CCHHHHHHHHHHHHHHhhcCCCCccceeeEEecC
Q 045127 231 WMLKAATNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGD--VSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSR 307 (508)
Q Consensus 231 ~~l~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 307 (508)
.++.-..++|.+.++||+|+||.|..++++ +++.+|+|++++. .......-|..|-++|..-+.+-|++++-.|.++
T Consensus 68 ~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~ 147 (1317)
T KOG0612|consen 68 KELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDE 147 (1317)
T ss_pred HHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCc
Confidence 455566789999999999999999999984 6889999999642 1123467789999999999999999999999999
Q ss_pred CeeEEEEeecCCCCHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccC-----
Q 045127 308 RTRAIVTEWTNGGNVELWLSE-SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKI----- 381 (508)
Q Consensus 308 ~~~~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~----- 381 (508)
.+.|+|||||+||+|-.++.. ..+++..+.-++..|+-||+-+|+. |+|||||||+|||+|..|.+|++|||.
T Consensus 148 ~~LYlVMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~m-gyVHRDiKPDNvLld~~GHikLADFGsClkm~ 226 (1317)
T KOG0612|consen 148 RYLYLVMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSM-GYVHRDIKPDNVLLDKSGHIKLADFGSCLKMD 226 (1317)
T ss_pred cceEEEEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhc-cceeccCCcceeEecccCcEeeccchhHHhcC
Confidence 999999999999999999983 3699999999999999999999999 999999999999999999999999964
Q ss_pred ---------------------------C-CCCCCcchhhHHHHHHHHHHhCCCCCcc
Q 045127 382 ---------------------------E-YQHRSTKYVYKFGLFLLEMITNRRPLEE 410 (508)
Q Consensus 382 ---------------------------~-~~~~~~~Dv~SlGvil~elltg~~P~~~ 410 (508)
. +.|.+.+|.||+||++|||+.|..||..
T Consensus 227 ~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYa 283 (1317)
T KOG0612|consen 227 ADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYA 283 (1317)
T ss_pred CCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchH
Confidence 2 5678899999999999999999999974
|
|
| >KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.8e-29 Score=238.89 Aligned_cols=236 Identities=20% Similarity=0.253 Sum_probs=192.8
Q ss_pred HHHHHhhcCCCCCceeeecCCeEEEEEEECC------CCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEE
Q 045127 231 WMLKAATNGFSKKNLVGKNEGAAIYKGILRD------GTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWN 304 (508)
Q Consensus 231 ~~l~~~~~~~~~~~~lg~G~~g~V~~~~~~~------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~ 304 (508)
.++...-.+++...++-+|.||.||+|.|.+ .+.|.+|.+++..++-....+..|.-.+..+.|||+.++.+++
T Consensus 277 ~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ 356 (563)
T KOG1024|consen 277 QELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVS 356 (563)
T ss_pred HhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEE
Confidence 3444455678888899999999999998743 3567889888877777788899999999999999999999988
Q ss_pred ec-CCeeEEEEeecCCCCHHHHhc---------cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCce
Q 045127 305 NS-RRTRAIVTEWTNGGNVELWLS---------ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEP 374 (508)
Q Consensus 305 ~~-~~~~~lv~e~~~~gsL~~~l~---------~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~ 374 (508)
.+ ....++++.++.-|+|..++. ...++..+.+.++.|++.|++|||++ |+||.||..+|.+||+...+
T Consensus 357 ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~-~ViHkDiAaRNCvIdd~LqV 435 (563)
T KOG1024|consen 357 IEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH-GVIHKDIAARNCVIDDQLQV 435 (563)
T ss_pred eeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc-CcccchhhhhcceehhheeE
Confidence 65 456789999999999999997 23467778899999999999999999 99999999999999999999
Q ss_pred EEeeccCC-----------------------------CCCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHH
Q 045127 375 LISRFKIE-----------------------------YQHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRM 424 (508)
Q Consensus 375 kl~Dfg~~-----------------------------~~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~ 424 (508)
|++|=.++ ..++.++|||||||+||||+| |+.||.+....+ +..+++.
T Consensus 436 kltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfE--m~~ylkd 513 (563)
T KOG1024|consen 436 KLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFE--MEHYLKD 513 (563)
T ss_pred EeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHH--HHHHHhc
Confidence 99987443 356789999999999999999 999997654322 2333333
Q ss_pred hccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhh
Q 045127 425 HYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKS 482 (508)
Q Consensus 425 ~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 482 (508)
.+ ++..+. .++.++..++.-||+..|++||++++++..|.+....
T Consensus 514 Gy----------RlaQP~---NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~~q 558 (563)
T KOG1024|consen 514 GY----------RLAQPF---NCPDELFTVMACCWALLPEERPSFSQLVICLSEFHTQ 558 (563)
T ss_pred cc----------eecCCC---CCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHH
Confidence 22 232222 3477888999999999999999999999999887543
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-29 Score=256.08 Aligned_cols=217 Identities=16% Similarity=0.151 Sum_probs=174.7
Q ss_pred hhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhc-CCCCccceeeEEecCCeeEEE
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQF-QHKNLIRVLGWNNSRRTRAIV 313 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv 313 (508)
.++.|.....+|.|+|+.|-.+.. .+++..++|++... ..+-.+|+.++... +||||+++.+.+.++.+.|+|
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~-----~~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v 394 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKR-----ADDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLV 394 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheecccc-----ccccccccchhhhhcCCCcceeecceecCCceeeee
Confidence 367888889999999999999986 56889999999644 12344677666665 699999999999999999999
Q ss_pred EeecCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEe-cCCCceEEeeccCC----------
Q 045127 314 TEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLL-TDNLEPLISRFKIE---------- 382 (508)
Q Consensus 314 ~e~~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll-~~~~~~kl~Dfg~~---------- 382 (508)
||++.|+-+.+.+...+....++..|+.+|+.|+.|||++ |++|||+||+|||+ +..++++|+|||.+
T Consensus 395 ~e~l~g~ell~ri~~~~~~~~e~~~w~~~lv~Av~~LH~~-gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~~~tp 473 (612)
T KOG0603|consen 395 MELLDGGELLRRIRSKPEFCSEASQWAAELVSAVDYLHEQ-GVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERSCDTP 473 (612)
T ss_pred ehhccccHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhc-CeeecCCChhheeecCCCCcEEEEEechhhhCchhhccc
Confidence 9999999888877755555578888999999999999999 99999999999999 58999999999874
Q ss_pred --------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHH
Q 045127 383 --------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQA 448 (508)
Q Consensus 383 --------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 448 (508)
..+++++|+||||++||+|++|+.||..-..+ ..+... +..........
T Consensus 474 ~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~-~ei~~~----------------i~~~~~s~~vS 536 (612)
T KOG0603|consen 474 ALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG-IEIHTR----------------IQMPKFSECVS 536 (612)
T ss_pred chhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch-HHHHHh----------------hcCCccccccC
Confidence 35678999999999999999999999754433 111111 11110012234
Q ss_pred HHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 449 EQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 449 ~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
....+++.+|++.||.+||+|.++...
T Consensus 537 ~~AKdLl~~LL~~dP~~Rl~~~~i~~h 563 (612)
T KOG0603|consen 537 DEAKDLLQQLLQVDPALRLGADEIGAH 563 (612)
T ss_pred HHHHHHHHHhccCChhhCcChhhhccC
Confidence 556778889999999999999999765
|
|
| >smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.1e-28 Score=232.69 Aligned_cols=212 Identities=16% Similarity=0.212 Sum_probs=170.4
Q ss_pred CCeEEEEEEEC-CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEeecCCCCHHHHhcc
Q 045127 250 EGAAIYKGILR-DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWTNGGNVELWLSE 328 (508)
Q Consensus 250 ~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 328 (508)
+||.||+|... +++.+++|++.........+.+.+|++.+++++|+|++++++++......+++|||+++++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 58999999985 58999999997554432267899999999999999999999999998999999999999999999974
Q ss_pred C-CCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC-------------------------
Q 045127 329 S-APSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE------------------------- 382 (508)
Q Consensus 329 ~-~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~------------------------- 382 (508)
. .+++..+..++.+++.++.|||+. +++|+||+|+||+++.++.++++|||.+
T Consensus 81 ~~~~~~~~~~~~~~~l~~~l~~lh~~-~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~pE~~~ 159 (244)
T smart00220 81 RGRLSEDEARFYARQILSALEYLHSN-GIIHRDLKPENILLDEDGHVKLADFGLARQLDPGGLLTTFVGTPEYMAPEVLL 159 (244)
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHc-CeecCCcCHHHeEECCCCcEEEccccceeeeccccccccccCCcCCCCHHHHc
Confidence 3 389999999999999999999999 9999999999999999999999999763
Q ss_pred -CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCC
Q 045127 383 -YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQ 461 (508)
Q Consensus 383 -~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~ 461 (508)
...+.++||||||++++++++|..||...... ........... .............+.+++.+|+..
T Consensus 160 ~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~-~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~i~~~l~~ 227 (244)
T smart00220 160 GKGYGKAVDVWSLGVILYELLTGKPPFPGDDQL-LELFKKIGKPK-----------PPFPPPEWKISPEAKDLIRKLLVK 227 (244)
T ss_pred cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcH-HHHHHHHhccC-----------CCCccccccCCHHHHHHHHHHccC
Confidence 23456899999999999999999998643111 11111111100 000000000245678899999999
Q ss_pred CCCCCCCHHHHHH
Q 045127 462 PTGKLPSLVQIYN 474 (508)
Q Consensus 462 dP~~RPs~~evl~ 474 (508)
+|++||++.++++
T Consensus 228 ~p~~Rp~~~~~~~ 240 (244)
T smart00220 228 DPEKRLTAEEALQ 240 (244)
T ss_pred CchhccCHHHHhh
Confidence 9999999999986
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. |
| >KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-29 Score=224.47 Aligned_cols=232 Identities=13% Similarity=0.172 Sum_probs=180.2
Q ss_pred hcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcC-CCCccceeeEEecC--CeeEE
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQ-HKNLIRVLGWNNSR--RTRAI 312 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~--~~~~l 312 (508)
.++|++.+++|+|.|+.||.|.. .+.+.++||++++. ..+.+.+|+.+|..+. ||||+++++...++ ....+
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV----kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaL 112 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV----KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSL 112 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH----HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchh
Confidence 46788899999999999999984 67889999999643 4577899999999997 99999999998865 45689
Q ss_pred EEeecCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEec-CCCceEEeeccCCC--------
Q 045127 313 VTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLT-DNLEPLISRFKIEY-------- 383 (508)
Q Consensus 313 v~e~~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~-~~~~~kl~Dfg~~~-------- 383 (508)
|+||+.+.+..... ..++..++.-++.++++||.|+|+. ||+|||+||.|+||| +....+++|+|++.
T Consensus 113 iFE~v~n~Dfk~ly--~tl~d~dIryY~~elLkALdyCHS~-GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~eY 189 (338)
T KOG0668|consen 113 IFEYVNNTDFKQLY--PTLTDYDIRYYIYELLKALDYCHSM-GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY 189 (338)
T ss_pred HhhhhccccHHHHh--hhhchhhHHHHHHHHHHHHhHHHhc-CcccccCCcceeeechhhceeeeeecchHhhcCCCcee
Confidence 99999988777664 5677788899999999999999999 999999999999999 45689999999853
Q ss_pred -------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhh-------hhhhc
Q 045127 384 -------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQL-------VVDER 437 (508)
Q Consensus 384 -------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~ 437 (508)
.++..-|+|||||++..|+..+.||........++++.++-.-.+.+.. .+|+.
T Consensus 190 nVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~ 269 (338)
T KOG0668|consen 190 NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQ 269 (338)
T ss_pred eeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChh
Confidence 2345669999999999999999999766555555555443222221111 12222
Q ss_pred ccC---------------CcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 438 MML---------------TENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 438 l~~---------------~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
+.+ .++..-...+.++++...+..|..+|+|+.|.+..
T Consensus 270 ~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~H 322 (338)
T KOG0668|consen 270 FEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAH 322 (338)
T ss_pred HhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcC
Confidence 210 01111113677788888899999999999999864
|
|
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.2e-28 Score=259.80 Aligned_cols=231 Identities=11% Similarity=0.038 Sum_probs=150.1
Q ss_pred hhcCCCCCceeeecCCeEEEEEEEC-C----CCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeE------E
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGILR-D----GTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGW------N 304 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~~-~----~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~------~ 304 (508)
..++|+..+.||+|+||.||+|.+. + +..||+|++...... +....| .+....+.++..+... .
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~---e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~ 204 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAV---EIWMNE--RVRRACPNSCADFVYGFLEPVSS 204 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchh---HHHHHH--HHHhhchhhHHHHHHhhhccccc
Confidence 5678999999999999999999974 4 689999998543211 111111 1111122222222211 2
Q ss_pred ecCCeeEEEEeecCCCCHHHHhccCCCC---------------------HHHHHHHHHHHHHHHHHHhhCCCccccCCCC
Q 045127 305 NSRRTRAIVTEWTNGGNVELWLSESAPS---------------------WKHRLKVLIGVVEAMCYLQEQWPEVDYDLRT 363 (508)
Q Consensus 305 ~~~~~~~lv~e~~~~gsL~~~l~~~~l~---------------------~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp 363 (508)
..+...++||||+++++|.+++.....+ ...+..++.|++.||+|||++ +|+||||||
T Consensus 205 ~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~-gIiHRDLKP 283 (566)
T PLN03225 205 KKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST-GIVHRDVKP 283 (566)
T ss_pred ccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC-CEEeCcCCH
Confidence 3456789999999999999988733221 233567999999999999999 999999999
Q ss_pred CCEEecC-CCceEEeeccCCCC--------------------------------------------------CCCcchhh
Q 045127 364 GSVLLTD-NLEPLISRFKIEYQ--------------------------------------------------HRSTKYVY 392 (508)
Q Consensus 364 ~NIll~~-~~~~kl~Dfg~~~~--------------------------------------------------~~~~~Dv~ 392 (508)
+|||++. ++.+||+|||++.. ++.++|||
T Consensus 284 ~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVw 363 (566)
T PLN03225 284 QNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIY 363 (566)
T ss_pred HHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccH
Confidence 9999985 68999999998641 11235999
Q ss_pred HHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccc--hhhhhhhhcccC-----CcchHHHHHHHHHHHHhcCCCCCCC
Q 045127 393 KFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPE--NLQLVVDERMML-----TENMFDQAEQGLGLGLMCTDQPTGK 465 (508)
Q Consensus 393 SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~-----~~~~~~~~~~l~~l~~~Cl~~dP~~ 465 (508)
||||++|||+++..|++... ..+...+...-.+ .....+.+.... ............+++.+|++.||.+
T Consensus 364 SlGviL~el~~~~~~~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~k 440 (566)
T PLN03225 364 SAGLIFLQMAFPNLRSDSNL---IQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQ 440 (566)
T ss_pred HHHHHHHHHHhCcCCCchHH---HHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCccc
Confidence 99999999999877754311 0111111100000 011111111000 0000001223457999999999999
Q ss_pred CCCHHHHHHH
Q 045127 466 LPSLVQIYNM 475 (508)
Q Consensus 466 RPs~~evl~~ 475 (508)
|||+.|+++.
T Consensus 441 R~ta~e~L~H 450 (566)
T PLN03225 441 RISAKAALAH 450 (566)
T ss_pred CCCHHHHhCC
Confidence 9999999974
|
|
| >KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.1e-29 Score=241.63 Aligned_cols=228 Identities=16% Similarity=0.275 Sum_probs=174.7
Q ss_pred cCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCH--H----HHHHHHHHHHHHhhcCCCCccceeeEEe-cCCe
Q 045127 238 NGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSR--E----IRDEFVEECKLLVQFQHKNLIRVLGWNN-SRRT 309 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~--~----~~~~~~~E~~~l~~l~h~niv~~~~~~~-~~~~ 309 (508)
++|-...+||+|||+.||+|.+ ...+.||||+-.-.... + ..+...+|.++.+.++||.||++++|+. +.+.
T Consensus 463 ~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtds 542 (775)
T KOG1151|consen 463 DRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDS 542 (775)
T ss_pred HHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecccc
Confidence 4566788999999999999985 56789999986433222 1 2345678999999999999999999987 5677
Q ss_pred eEEEEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCC-CccccCCCCCCEEec---CCCceEEeeccCC--
Q 045127 310 RAIVTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQW-PEVDYDLRTGSVLLT---DNLEPLISRFKIE-- 382 (508)
Q Consensus 310 ~~lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~-~iiH~Dlkp~NIll~---~~~~~kl~Dfg~~-- 382 (508)
+|-|+|||+|.+|+-+++ ...+++.++..|+.||+.||.||.... +|||-||||.|||+. ..|.+||.|||++
T Consensus 543 FCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKI 622 (775)
T KOG1151|consen 543 FCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKI 622 (775)
T ss_pred ceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecchhhh
Confidence 899999999999999998 667899999999999999999998765 899999999999995 4688999999873
Q ss_pred ------------------------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhc
Q 045127 383 ------------------------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHY 426 (508)
Q Consensus 383 ------------------------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~ 426 (508)
...+.|+||||+|||+|..+.|+.||....... .+.+. .
T Consensus 623 MdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQ-dILqe---N- 697 (775)
T KOG1151|consen 623 MDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQ-DILQE---N- 697 (775)
T ss_pred ccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHH-HHHhh---h-
Confidence 234678999999999999999999997532211 11111 0
Q ss_pred cchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 427 PENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 427 ~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
.++...-...+.......+...++.+|+++--.+|....++...
T Consensus 698 -----TIlkAtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~d 741 (775)
T KOG1151|consen 698 -----TILKATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLACD 741 (775)
T ss_pred -----chhcceeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHccC
Confidence 11111111111111223445668899999999999988887653
|
|
| >KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-29 Score=228.95 Aligned_cols=235 Identities=16% Similarity=0.207 Sum_probs=172.3
Q ss_pred hcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecC-CCCHHHHHHHHHHHHHHhhcCCCCccceeeEEec--------
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKG-DVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNS-------- 306 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~-~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-------- 306 (508)
.+.|+...+||+|.||.||+|+.+ .|+.||+|+.-- ...........+|+++|..++|+|++.++..|..
T Consensus 16 ~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~ 95 (376)
T KOG0669|consen 16 VSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRD 95 (376)
T ss_pred chHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccc
Confidence 345677789999999999999974 577788876532 1111123456799999999999999999988763
Q ss_pred CCeeEEEEeecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-
Q 045127 307 RRTRAIVTEWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY- 383 (508)
Q Consensus 307 ~~~~~lv~e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~- 383 (508)
....|+|+.+|+. +|.-.+. ..+++..++.+++.+++.||.|+|+. .|+|||+||+|+||+.++..||+|||+++
T Consensus 96 r~t~ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~-kilHRDmKaaNvLIt~dgilklADFGlar~ 173 (376)
T KOG0669|consen 96 RATFYLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRN-KILHRDMKAANVLITKDGILKLADFGLARA 173 (376)
T ss_pred cceeeeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHh-hHHhhcccHhhEEEcCCceEEeeccccccc
Confidence 2357999999976 8888887 46889999999999999999999999 99999999999999999999999999852
Q ss_pred -------------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHH--------
Q 045127 384 -------------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRM-------- 424 (508)
Q Consensus 384 -------------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~-------- 424 (508)
.++++.|||+-|||+.||+||.+-+....+. .-...+..
T Consensus 174 fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteq--qql~~Is~LcGs~tke 251 (376)
T KOG0669|consen 174 FSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQ--QQLHLISQLCGSITKE 251 (376)
T ss_pred eecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHH--HHHHHHHHHhccCCcc
Confidence 4567889999999999999999887653321 11111111
Q ss_pred hccch----hhhhhhhc-c-cCCc-chHHHH------HHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 425 HYPEN----LQLVVDER-M-MLTE-NMFDQA------EQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 425 ~~~~~----~~~~~~~~-l-~~~~-~~~~~~------~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
.+++- +.+.+.-. + .... ...+.. ...++++...+..||.+|++++++++.
T Consensus 252 vWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh 315 (376)
T KOG0669|consen 252 VWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNH 315 (376)
T ss_pred cCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhch
Confidence 11110 11111000 1 0000 001111 256678888899999999999988753
|
|
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.4e-27 Score=246.04 Aligned_cols=228 Identities=14% Similarity=0.169 Sum_probs=159.4
Q ss_pred hhcCCCCCceeeecCCeEEEEEEE-----------------CCCCEEEEEEecCCCCHHHHH--------------HHHH
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGIL-----------------RDGTRVKIEIYKGDVSREIRD--------------EFVE 284 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~-----------------~~~~~vavK~~~~~~~~~~~~--------------~~~~ 284 (508)
..++|++.++||+|+||.||+|.. .+++.||||.+...... ..+ ....
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~-~~~~fl~e~~~~~~~~e~~~v 221 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQG-VRQDFLKTGTLAKGSAETGMV 221 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchh-hHHHHHhhhhhhhcccchhHH
Confidence 467899999999999999999964 23568999998643221 122 2345
Q ss_pred HHHHHhhcCCCCc-----cceeeEEec--------CCeeEEEEeecCCCCHHHHhcc-----------------------
Q 045127 285 ECKLLVQFQHKNL-----IRVLGWNNS--------RRTRAIVTEWTNGGNVELWLSE----------------------- 328 (508)
Q Consensus 285 E~~~l~~l~h~ni-----v~~~~~~~~--------~~~~~lv~e~~~~gsL~~~l~~----------------------- 328 (508)
|+.++.+++|.++ +++++++.. .+..++||||+++++|.++++.
T Consensus 222 E~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~ 301 (507)
T PLN03224 222 EAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNM 301 (507)
T ss_pred HHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhc
Confidence 6777777766554 677777653 3467999999999999998862
Q ss_pred --CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCCCC---------------------
Q 045127 329 --SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEYQH--------------------- 385 (508)
Q Consensus 329 --~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~--------------------- 385 (508)
..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 302 ~~~~~~~~~~~~i~~ql~~aL~~lH~~-~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE 380 (507)
T PLN03224 302 PQDKRDINVIKGVMRQVLTGLRKLHRI-GIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPE 380 (507)
T ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChh
Confidence 1235677889999999999999999 9999999999999999999999999875210
Q ss_pred -----------------------------CCcchhhHHHHHHHHHHhCCC-CCcccccCcc-------cHHHHHHHhccc
Q 045127 386 -----------------------------RSTKYVYKFGLFLLEMITNRR-PLEEFERGEA-------GFIEYIRMHYPE 428 (508)
Q Consensus 386 -----------------------------~~~~Dv~SlGvil~elltg~~-P~~~~~~~~~-------~~~~~~~~~~~~ 428 (508)
..+.||||+||++++|++|.. |+........ ....|.. +..
T Consensus 381 ~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~--~~~ 458 (507)
T PLN03224 381 ELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRM--YKG 458 (507)
T ss_pred hhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHh--hcc
Confidence 013599999999999999875 6653211110 1111110 000
Q ss_pred hhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCC---CCCCCHHHHHHH
Q 045127 429 NLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPT---GKLPSLVQIYNM 475 (508)
Q Consensus 429 ~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP---~~RPs~~evl~~ 475 (508)
... .............+++.+++..+| .+|+|++|++++
T Consensus 459 -------~~~-~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~H 500 (507)
T PLN03224 459 -------QKY-DFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSH 500 (507)
T ss_pred -------cCC-CcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCC
Confidence 000 000001123455667777887655 789999999864
|
|
| >KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.7e-27 Score=247.23 Aligned_cols=230 Identities=18% Similarity=0.227 Sum_probs=188.2
Q ss_pred CHHHHHHhhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhc-CCCCccceeeEEec
Q 045127 229 TTWMLKAATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQF-QHKNLIRVLGWNNS 306 (508)
Q Consensus 229 ~~~~l~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~ 306 (508)
.++.+...++-|++.+.||.|.+|.||+++. ++++.+|+|+...... ..+++..|.++++.. .|||++.++|++..
T Consensus 10 ~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d--~deEiE~eynil~~~~~hpnv~~fyg~~~k 87 (953)
T KOG0587|consen 10 DLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTED--EEEEIELEYNMLKKYSHHPNVATFYGAFIK 87 (953)
T ss_pred chhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCcc--ccHHHHHHHHHHHhccCCCCcceEEEEEEE
Confidence 4455556778889999999999999999996 6789999999865543 346677889999888 59999999999873
Q ss_pred -----CCeeEEEEeecCCCCHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEee
Q 045127 307 -----RRTRAIVTEWTNGGNVELWLS---ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISR 378 (508)
Q Consensus 307 -----~~~~~lv~e~~~~gsL~~~l~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~D 378 (508)
+++.++|||||.+||..++++ +.++.|+.+..|++.++.|+.+||.+ .++|||||-.|||++.++.+|++|
T Consensus 88 ~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~n-kviHRDikG~NiLLT~e~~VKLvD 166 (953)
T KOG0587|consen 88 KDPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNN-KVIHRDIKGQNVLLTENAEVKLVD 166 (953)
T ss_pred ecCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhc-ceeeecccCceEEEeccCcEEEee
Confidence 578899999999999999998 77899999999999999999999999 999999999999999999999999
Q ss_pred ccCCC--------------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhc
Q 045127 379 FKIEY--------------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHY 426 (508)
Q Consensus 379 fg~~~--------------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~ 426 (508)
||.+. .|+.++|+||+|++..||.-|.+|+.++.....- -.+
T Consensus 167 FGvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraL------F~I 240 (953)
T KOG0587|consen 167 FGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRAL------FLI 240 (953)
T ss_pred eeeeeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhh------ccC
Confidence 98742 3456789999999999999999999876543210 011
Q ss_pred cchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 427 PENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 427 ~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
+.+ -.|.+.. .....+++.+++..|+..|-.+||++.++++
T Consensus 241 pRN----PPPkLkr---p~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~ 281 (953)
T KOG0587|consen 241 PRN----PPPKLKR---PKKWSKKFNDFISTCLVKDYEQRPSTEELLK 281 (953)
T ss_pred CCC----CCccccc---hhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence 111 0111111 1345778899999999999999999988764
|
|
| >KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.7e-28 Score=232.26 Aligned_cols=235 Identities=15% Similarity=0.139 Sum_probs=178.8
Q ss_pred hcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcC-C-C----CccceeeEEecCCe
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQ-H-K----NLIRVLGWNNSRRT 309 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h-~----niv~~~~~~~~~~~ 309 (508)
+++|.+...+|+|.||.|..+.. ..+..||||+++.- ....+...-|++++.++. + | -++++.+|+.-.++
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V--~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrgh 165 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNV--DKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGH 165 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHH--HHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCc
Confidence 78999999999999999999986 34799999999642 224566778999999993 2 2 37888899999999
Q ss_pred eEEEEeecCCCCHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecC----------------
Q 045127 310 RAIVTEWTNGGNVELWLS---ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTD---------------- 370 (508)
Q Consensus 310 ~~lv~e~~~~gsL~~~l~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~---------------- 370 (508)
.+||+|.+ |-|+.+++. ..+++...+..++.|++++++|||+. +++|-||||+||++..
T Consensus 166 iCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~-kl~HTDLKPENILfvss~~~~~~~~k~~~~~~ 243 (415)
T KOG0671|consen 166 ICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDL-KLTHTDLKPENILFVSSEYFKTYNPKKKVCFI 243 (415)
T ss_pred eEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhc-ceeecCCChheEEEeccceEEEeccCCcccee
Confidence 99999988 669999998 45689999999999999999999999 9999999999999842
Q ss_pred ----CCceEEeeccCCC------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccC-cccHHHH
Q 045127 371 ----NLEPLISRFKIEY------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERG-EAGFIEY 421 (508)
Q Consensus 371 ----~~~~kl~Dfg~~~------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~-~~~~~~~ 421 (508)
+..+|++|||.+. .++.++||||+||||+|+.||...|+.-.+. ...+.+.
T Consensus 244 r~~ks~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMer 323 (415)
T KOG0671|consen 244 RPLKSTAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMER 323 (415)
T ss_pred ccCCCcceEEEecCCcceeccCcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHH
Confidence 2457999999752 4577899999999999999999988743321 1122222
Q ss_pred HHHhccchhhhhh--------------------------hhcc---cCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHH
Q 045127 422 IRMHYPENLQLVV--------------------------DERM---MLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQI 472 (508)
Q Consensus 422 ~~~~~~~~~~~~~--------------------------~~~l---~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev 472 (508)
+-..+|..+..-. ++.- ........+..++.+++..++..||.+|+|+.|+
T Consensus 324 IlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EA 403 (415)
T KOG0671|consen 324 ILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREA 403 (415)
T ss_pred hhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHH
Confidence 2222222111100 0000 0011123567789999999999999999999999
Q ss_pred HHH
Q 045127 473 YNM 475 (508)
Q Consensus 473 l~~ 475 (508)
+..
T Consensus 404 L~H 406 (415)
T KOG0671|consen 404 LSH 406 (415)
T ss_pred hcC
Confidence 863
|
|
| >cd00180 PKc Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-26 Score=214.38 Aligned_cols=182 Identities=22% Similarity=0.363 Sum_probs=161.5
Q ss_pred eeecCCeEEEEEEEC-CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEeecCCCCHHH
Q 045127 246 VGKNEGAAIYKGILR-DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWTNGGNVEL 324 (508)
Q Consensus 246 lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~ 324 (508)
||+|++|.||++... +++.+++|++...........+.+|++.++.++|++++++++++......+++|||+++++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 689999999999985 4899999999755443245789999999999999999999999999899999999999999999
Q ss_pred HhccC--CCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecC-CCceEEeeccCCC------------------
Q 045127 325 WLSES--APSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTD-NLEPLISRFKIEY------------------ 383 (508)
Q Consensus 325 ~l~~~--~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~-~~~~kl~Dfg~~~------------------ 383 (508)
++... .+++..+..++.++++++++||+. +++|+||+|.||+++. ++.++++|||.+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~-~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~ 159 (215)
T cd00180 81 LLKENEGKLSEDEILRILLQILEGLEYLHSN-GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPAY 159 (215)
T ss_pred HHHhccCCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhcccCCCCc
Confidence 99854 789999999999999999999999 9999999999999999 8999999997532
Q ss_pred ----------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHHHHHHH
Q 045127 384 ----------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQAEQGLG 453 (508)
Q Consensus 384 ----------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~ 453 (508)
..+.+.|+|++|++++++ ..+.+
T Consensus 160 ~~pe~~~~~~~~~~~~D~~~lg~~~~~l-----------------------------------------------~~~~~ 192 (215)
T cd00180 160 MAPEVLLGKGYYSEKSDIWSLGVILYEL-----------------------------------------------PELKD 192 (215)
T ss_pred cChhHhcccCCCCchhhhHHHHHHHHHH-----------------------------------------------HHHHH
Confidence 344678999999999998 34567
Q ss_pred HHHhcCCCCCCCCCCHHHHHHH
Q 045127 454 LGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 454 l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
++..|++.+|++||++.++++.
T Consensus 193 ~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 193 LIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred HHHHHhhCCcccCcCHHHHhhC
Confidence 8889999999999999999864
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which |
| >KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=6e-28 Score=233.82 Aligned_cols=173 Identities=16% Similarity=0.185 Sum_probs=153.6
Q ss_pred hcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCC--CHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEE
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDV--SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIV 313 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 313 (508)
.+.|+.-++||+||||.||-+.. .+|+-+|.|.+.+.. ..........|-.+|.+++.+.||.+--+|++.+..++|
T Consensus 184 ~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClV 263 (591)
T KOG0986|consen 184 KNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLV 263 (591)
T ss_pred ccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEE
Confidence 45678889999999999999986 468999998885332 223445678899999999999999999999999999999
Q ss_pred EeecCCCCHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC--------
Q 045127 314 TEWTNGGNVELWLS---ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE-------- 382 (508)
Q Consensus 314 ~e~~~~gsL~~~l~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~-------- 382 (508)
+..|.||+|.-.+. ...+++..+.-++.+|+.||++||+. +||.||+||+|||+|+.|+++|+|+|++
T Consensus 264 LtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~-~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g~~ 342 (591)
T KOG0986|consen 264 LTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRR-RIVYRDLKPENILLDDHGHVRISDLGLAVEIPEGKP 342 (591)
T ss_pred EEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhc-ceeeccCChhheeeccCCCeEeeccceEEecCCCCc
Confidence 99999999998887 45799999999999999999999999 9999999999999999999999999874
Q ss_pred ------------------CCCCCcchhhHHHHHHHHHHhCCCCCcc
Q 045127 383 ------------------YQHRSTKYVYKFGLFLLEMITNRRPLEE 410 (508)
Q Consensus 383 ------------------~~~~~~~Dv~SlGvil~elltg~~P~~~ 410 (508)
..|+...|.||+||++|||+.|+.||..
T Consensus 343 ~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~ 388 (591)
T KOG0986|consen 343 IRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQ 388 (591)
T ss_pred cccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhh
Confidence 3577889999999999999999999974
|
|
| >KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.5e-28 Score=238.05 Aligned_cols=215 Identities=15% Similarity=0.201 Sum_probs=166.5
Q ss_pred CceeeecCCeEEEEEEE-CCCCEEEEEEecCCC-CHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEeecCCC
Q 045127 243 KNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDV-SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWTNGG 320 (508)
Q Consensus 243 ~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 320 (508)
.+.||+|.||+||-|++ ++|+.||||++.+.. .......+.+|+.+|.++.||.||.+-..|++.+..++|||-+.|
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~G- 647 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHG- 647 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcc-
Confidence 48899999999999997 579999999996543 234567899999999999999999999999999999999999965
Q ss_pred CHHHHh-c--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCC---CceEEeeccCCCC----------
Q 045127 321 NVELWL-S--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDN---LEPLISRFKIEYQ---------- 384 (508)
Q Consensus 321 sL~~~l-~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~---~~~kl~Dfg~~~~---------- 384 (508)
+..+++ . .+++++....-++.||+.||.|||.+ +|+|+|+||+|||+... -.+||||||+++.
T Consensus 648 DMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~k-nIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFRrsV 726 (888)
T KOG4236|consen 648 DMLEMILSSEKGRLPERITKFLVTQILVALRYLHFK-NIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFRRSV 726 (888)
T ss_pred hHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhc-ceeeccCCchheeeccCCCCCceeeccccceeecchhhhhhhh
Confidence 555544 3 78899988888999999999999999 99999999999999743 4799999998643
Q ss_pred ----------------CCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcch-HHH
Q 045127 385 ----------------HRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENM-FDQ 447 (508)
Q Consensus 385 ----------------~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~ 447 (508)
|...-|+||.|||+|.-++|..||.+.. ++.+.+. +..+..+... .+.
T Consensus 727 VGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdE----dIndQIQ-----------NAaFMyPp~PW~ei 791 (888)
T KOG4236|consen 727 VGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDE----DINDQIQ-----------NAAFMYPPNPWSEI 791 (888)
T ss_pred cCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCcc----chhHHhh-----------ccccccCCCchhhc
Confidence 3445699999999999999999997432 2221111 1111111111 122
Q ss_pred HHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 448 AEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 448 ~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
....++++...++..-.+|-|.+.-+.
T Consensus 792 s~~AidlIn~LLqVkm~kRysvdk~ls 818 (888)
T KOG4236|consen 792 SPEAIDLINNLLQVKMRKRYSVDKSLS 818 (888)
T ss_pred CHHHHHHHHHHHHHHHHHhcchHhhcc
Confidence 445566777777777778877766553
|
|
| >KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.3e-27 Score=216.11 Aligned_cols=229 Identities=14% Similarity=0.205 Sum_probs=177.0
Q ss_pred hcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhc-CCCCccceee-EEecCCeeEEE
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSREIRDEFVEECKLLVQF-QHKNLIRVLG-WNNSRRTRAIV 313 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~-~~~~~~~~~lv 313 (508)
.+.|.+.+.+|+|.||.+-.++++ ..+.+++|.+..... ..++|.+|..---.+ .|.||+.-++ .|.+.+.++++
T Consensus 23 ~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~t--t~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~ 100 (378)
T KOG1345|consen 23 EDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQT--TQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFV 100 (378)
T ss_pred hhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchh--hHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEe
Confidence 356888899999999999999984 578899999865543 368899998876666 4999998876 46677888999
Q ss_pred EeecCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEec--CCCceEEeeccCCCC-------
Q 045127 314 TEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLT--DNLEPLISRFKIEYQ------- 384 (508)
Q Consensus 314 ~e~~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~--~~~~~kl~Dfg~~~~------- 384 (508)
+||++.|+|..-+....+.+....+++.|+++|+.|||++ ++||||||.+||||- +..++|+||||.+.+
T Consensus 101 qE~aP~gdL~snv~~~GigE~~~K~v~~ql~SAi~fMHsk-nlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~tV~~ 179 (378)
T KOG1345|consen 101 QEFAPRGDLRSNVEAAGIGEANTKKVFAQLLSAIEFMHSK-NLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTTVKY 179 (378)
T ss_pred eccCccchhhhhcCcccccHHHHHHHHHHHHHHHHHhhcc-chhhcccccceEEEecCCccEEEeeecccccccCceehh
Confidence 9999999999999888899999999999999999999999 999999999999984 446899999998532
Q ss_pred ----------------------CCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCc
Q 045127 385 ----------------------HRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTE 442 (508)
Q Consensus 385 ----------------------~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 442 (508)
..+.+|||.||++++.++||+.||+.....+..+..|.. +.......+...+
T Consensus 180 ~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~--w~~rk~~~~P~~F---- 253 (378)
T KOG1345|consen 180 LEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQ--WLKRKNPALPKKF---- 253 (378)
T ss_pred hhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHH--HhcccCccCchhh----
Confidence 245789999999999999999999866555555544432 1111111111111
Q ss_pred chHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHH
Q 045127 443 NMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMI 476 (508)
Q Consensus 443 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L 476 (508)
.....+++++..+-+.++|++|--+.++.++-
T Consensus 254 --~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~r 285 (378)
T KOG1345|consen 254 --NPFSEKALRLFKKSLTPRFKDRCKIWTAKKMR 285 (378)
T ss_pred --cccCHHHHHHHHHhcCCcccccchhHHHHHHH
Confidence 12244556666777899999996555555543
|
|
| >KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-27 Score=223.08 Aligned_cols=175 Identities=21% Similarity=0.235 Sum_probs=154.3
Q ss_pred hcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCC--CHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEE
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDV--SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIV 313 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 313 (508)
.++|+-.++||+|.||.|-.++- ..++.+|+|++++.. ..+..+.-..|-++|+..+||.+..+--.|...+..|+|
T Consensus 167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFV 246 (516)
T KOG0690|consen 167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFV 246 (516)
T ss_pred cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEE
Confidence 36778889999999999999986 468999999997653 233455667888999999999999998889999999999
Q ss_pred EeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC----------
Q 045127 314 TEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE---------- 382 (508)
Q Consensus 314 ~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~---------- 382 (508)
|||..||.|.-.+. ...++++...-+-..|+.||.|||++ +||.||+|.+|.|+|.+|.+||+|||+.
T Consensus 247 MeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~-~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~g~t~ 325 (516)
T KOG0690|consen 247 MEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSR-NIVYRDLKLENLLLDKDGHIKITDFGLCKEEIKYGDTT 325 (516)
T ss_pred EEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhC-CeeeeechhhhheeccCCceEeeecccchhccccccee
Confidence 99999999998887 66788888888899999999999999 9999999999999999999999999873
Q ss_pred -----------------CCCCCcchhhHHHHHHHHHHhCCCCCcccc
Q 045127 383 -----------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFE 412 (508)
Q Consensus 383 -----------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~ 412 (508)
..|..+.|.|.+||++|||++|+.||....
T Consensus 326 kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~d 372 (516)
T KOG0690|consen 326 KTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKD 372 (516)
T ss_pred ccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccc
Confidence 245678899999999999999999997543
|
|
| >KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.7e-27 Score=216.88 Aligned_cols=171 Identities=15% Similarity=0.247 Sum_probs=145.9
Q ss_pred CCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCC-HHHHHHHHHHHHHHhhcCCCCccceeeEEecC-----CeeE
Q 045127 239 GFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVS-REIRDEFVEECKLLVQFQHKNLIRVLGWNNSR-----RTRA 311 (508)
Q Consensus 239 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-----~~~~ 311 (508)
+.+..+.||.|+||.||.+.+ ++|+.||.|++..-.. -...+++.+|++++.-++|.|++..+++..-. .+.|
T Consensus 54 Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiY 133 (449)
T KOG0664|consen 54 DIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELY 133 (449)
T ss_pred cCCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHH
Confidence 345678999999999999997 5899999999843221 13467889999999999999999998876543 3468
Q ss_pred EEEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC--------
Q 045127 312 IVTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE-------- 382 (508)
Q Consensus 312 lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~-------- 382 (508)
+++|.|.. +|...+- ...++.+.+.-+..||++||+|||+. +|.||||||.|.+++.+...||||||++
T Consensus 134 V~TELmQS-DLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA-~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~ 211 (449)
T KOG0664|consen 134 VLTELMQS-DLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTA-NILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDR 211 (449)
T ss_pred HHHHHHHh-hhhheeccCCCCCcchhhhhHHHHHhhhHHHhhc-chhhccCCCccEEeccCceEEecccccccccchhhh
Confidence 88998854 7777765 66788899999999999999999999 9999999999999999999999999984
Q ss_pred ---------------------CCCCCcchhhHHHHHHHHHHhCCCCCccc
Q 045127 383 ---------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEF 411 (508)
Q Consensus 383 ---------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~ 411 (508)
+.|+.+.||||.|||+.|++.++..|...
T Consensus 212 ~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq 261 (449)
T KOG0664|consen 212 LNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAA 261 (449)
T ss_pred hhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhcc
Confidence 56788999999999999999998888643
|
|
| >KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.5e-27 Score=232.16 Aligned_cols=223 Identities=13% Similarity=0.136 Sum_probs=174.5
Q ss_pred cCCCCCceeeecCCeEEEEEEECCC-CEEEEEEecCC--CCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEE
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILRDG-TRVKIEIYKGD--VSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVT 314 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~~~-~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 314 (508)
.+++....||-||||.|-.+..... ..+|+|++++. ......+....|-.+|...+.|.||++|..|.++...|+.|
T Consensus 420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLm 499 (732)
T KOG0614|consen 420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLM 499 (732)
T ss_pred hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhH
Confidence 3455667899999999999987543 34888888633 22335667889999999999999999999999999999999
Q ss_pred eecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCCC---------
Q 045127 315 EWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEYQ--------- 384 (508)
Q Consensus 315 e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~--------- 384 (508)
|-|-||.+...+. .+.++..+..-++.-+++|++|||++ |||.|||||+|.++|.+|.+||.|||+++.
T Consensus 500 EaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k-~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~KTwT 578 (732)
T KOG0614|consen 500 EACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRK-GIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGRKTWT 578 (732)
T ss_pred HhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhc-CceeccCChhheeeccCCceEEeehhhHHHhccCCceee
Confidence 9999999999998 77899999999999999999999999 999999999999999999999999998532
Q ss_pred -----------------CCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHH
Q 045127 385 -----------------HRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQ 447 (508)
Q Consensus 385 -----------------~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 447 (508)
.+.++|.||+|+++|||++|.+||....... .+. .+-..+..+--| ...
T Consensus 579 FcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmk----tYn--~ILkGid~i~~P--------r~I 644 (732)
T KOG0614|consen 579 FCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMK----TYN--LILKGIDKIEFP--------RRI 644 (732)
T ss_pred ecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHH----HHH--HHHhhhhhhhcc--------ccc
Confidence 2457899999999999999999997543221 110 011111111111 223
Q ss_pred HHHHHHHHHhcCCCCCCCCCC-----HHHHHHH
Q 045127 448 AEQGLGLGLMCTDQPTGKLPS-----LVQIYNM 475 (508)
Q Consensus 448 ~~~l~~l~~~Cl~~dP~~RPs-----~~evl~~ 475 (508)
.+...+++.+.+..+|.+|-. +.+|.+.
T Consensus 645 ~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH 677 (732)
T KOG0614|consen 645 TKTATDLIKKLCRDNPTERLGYQKGGINDIKKH 677 (732)
T ss_pred chhHHHHHHHHHhcCcHhhhccccCChHHHHhh
Confidence 445566777777899999975 6677654
|
|
| >KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.3e-26 Score=229.25 Aligned_cols=189 Identities=13% Similarity=0.112 Sum_probs=157.7
Q ss_pred CCCHHHHHHhh---cCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCC--CHHHHHHHHHHHHHHhhcCCCCccce
Q 045127 227 KFTTWMLKAAT---NGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDV--SREIRDEFVEECKLLVQFQHKNLIRV 300 (508)
Q Consensus 227 ~~~~~~l~~~~---~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~ 300 (508)
+..|-.++++. .-|..++.||-|+||.|..++- .+...+|.|.+++.. ..........|-++|..-+.+-||++
T Consensus 615 ESnYiRLkRaKMdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrL 694 (1034)
T KOG0608|consen 615 ESNYIRLKRAKMDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRL 694 (1034)
T ss_pred hhhHHHHHHhhccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEE
Confidence 34444555543 3577889999999999999974 457789999986432 22345567889999999999999999
Q ss_pred eeEEecCCeeEEEEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeec
Q 045127 301 LGWNNSRRTRAIVTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRF 379 (508)
Q Consensus 301 ~~~~~~~~~~~lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Df 379 (508)
+-.|.+.+..|+||+|++||++-.++. -+.+++..+.-++..+..|+++.|.. |+|||||||+|||||.+|.+||.||
T Consensus 695 yySFQDkdnLYFVMdYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkm-GFIHRDiKPDNILIDrdGHIKLTDF 773 (1034)
T KOG0608|consen 695 YYSFQDKDNLYFVMDYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKM-GFIHRDIKPDNILIDRDGHIKLTDF 773 (1034)
T ss_pred EEEeccCCceEEEEeccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhc-cceecccCccceEEccCCceeeeec
Confidence 999999999999999999999988876 56677777888889999999999999 9999999999999999999999999
Q ss_pred cCC---------------------------------------------------------------------CCCCCcch
Q 045127 380 KIE---------------------------------------------------------------------YQHRSTKY 390 (508)
Q Consensus 380 g~~---------------------------------------------------------------------~~~~~~~D 390 (508)
|+. ..++..+|
T Consensus 774 GLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cd 853 (1034)
T KOG0608|consen 774 GLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCD 853 (1034)
T ss_pred cccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccch
Confidence 762 12345689
Q ss_pred hhHHHHHHHHHHhCCCCCcccccCcc
Q 045127 391 VYKFGLFLLEMITNRRPLEEFERGEA 416 (508)
Q Consensus 391 v~SlGvil~elltg~~P~~~~~~~~~ 416 (508)
.||.|||||||+.|+.||-.....+.
T Consensus 854 wws~gvil~em~~g~~pf~~~tp~~t 879 (1034)
T KOG0608|consen 854 WWSVGVILYEMLVGQPPFLADTPGET 879 (1034)
T ss_pred hhHhhHHHHHHhhCCCCccCCCCCcc
Confidence 99999999999999999987665543
|
|
| >KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.4e-26 Score=239.32 Aligned_cols=212 Identities=19% Similarity=0.249 Sum_probs=161.1
Q ss_pred CCCCceeeecCCeE-EEEEEECCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhc-CCCCccceeeEEecCCeeEEEEeec
Q 045127 240 FSKKNLVGKNEGAA-IYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQF-QHKNLIRVLGWNNSRRTRAIVTEWT 317 (508)
Q Consensus 240 ~~~~~~lg~G~~g~-V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~ 317 (508)
|...+.+|.|+.|+ ||+|.+. |+.||||++-.+ ......+|+..|+.- +|||||++++.-.++...||..|.|
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~ye-~R~VAVKrll~e----~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC 585 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVYE-GREVAVKRLLEE----FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELC 585 (903)
T ss_pred eccHHHcccCCCCcEEEEEeeC-CceehHHHHhhH----hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHh
Confidence 44557889999875 5999984 889999998432 345667999999988 5999999999988999999999999
Q ss_pred CCCCHHHHhccC--CC---CHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecC-----CCceEEeeccCCCCC--
Q 045127 318 NGGNVELWLSES--AP---SWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTD-----NLEPLISRFKIEYQH-- 385 (508)
Q Consensus 318 ~~gsL~~~l~~~--~l---~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~-----~~~~kl~Dfg~~~~~-- 385 (508)
.. +|+++++.. .. .......+..|+++||++||+. +||||||||.||||+. ...++|+|||++++.
T Consensus 586 ~~-sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl-~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~ 663 (903)
T KOG1027|consen 586 AC-SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSL-KIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAG 663 (903)
T ss_pred hh-hHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhc-ccccccCCCceEEEEccCCCcceeEEecccccccccCC
Confidence 65 999999842 11 1134467889999999999998 9999999999999975 257999999885322
Q ss_pred ----------------------------CCcchhhHHHHHHHHHHhC-CCCCcccccCcccHHHHHHHhccchhhhhhhh
Q 045127 386 ----------------------------RSTKYVYKFGLFLLEMITN-RRPLEEFERGEAGFIEYIRMHYPENLQLVVDE 436 (508)
Q Consensus 386 ----------------------------~~~~Dv~SlGvil~elltg-~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (508)
+.++||||+||++|+.++| ..||.+....+.++..-. .
T Consensus 664 ~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NIl~~~-------------~ 730 (903)
T KOG1027|consen 664 GKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANILTGN-------------Y 730 (903)
T ss_pred CcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhhhhcCc-------------c
Confidence 3467999999999999996 999975433222211100 0
Q ss_pred cc-cCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 437 RM-MLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 437 ~l-~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
.+ ...+. .++ +..+++.+|++++|..||++.+|+.
T Consensus 731 ~L~~L~~~-~d~--eA~dLI~~ml~~dP~~RPsa~~VL~ 766 (903)
T KOG1027|consen 731 TLVHLEPL-PDC--EAKDLISRMLNPDPQLRPSATDVLN 766 (903)
T ss_pred ceeeeccC-chH--HHHHHHHHhcCCCcccCCCHHHHhC
Confidence 00 00011 111 6678889999999999999999984
|
|
| >KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.6e-25 Score=217.49 Aligned_cols=130 Identities=17% Similarity=0.234 Sum_probs=113.3
Q ss_pred hcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcC-----C---CCccceeeEEec-
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQ-----H---KNLIRVLGWNNS- 306 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-----h---~niv~~~~~~~~- 306 (508)
.++|-+.++||-|.|++||.|.+ .+.+.||+|+.+. .+...+....|+++|++++ | .+||+++++|..
T Consensus 77 ~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKS--AqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~Fkhs 154 (590)
T KOG1290|consen 77 GGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKS--AQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHS 154 (590)
T ss_pred CceEEEEEeccccccceeEEEeeccCCeEEEEEEEeh--hhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceec
Confidence 37889999999999999999996 5688999999953 3335677889999999983 3 369999999873
Q ss_pred ---CCeeEEEEeecCCCCHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEec
Q 045127 307 ---RRTRAIVTEWTNGGNVELWLS---ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLT 369 (508)
Q Consensus 307 ---~~~~~lv~e~~~~gsL~~~l~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~ 369 (508)
+.+++||+|++ |-+|..++. ...++...+..|+.||+.||.|||++|||||-||||+|||+.
T Consensus 155 GpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 155 GPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLC 222 (590)
T ss_pred CCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeee
Confidence 56899999999 668888887 678999999999999999999999999999999999999984
|
|
| >smart00221 STYKc Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-24 Score=205.18 Aligned_cols=170 Identities=20% Similarity=0.346 Sum_probs=150.6
Q ss_pred CCCCceeeecCCeEEEEEEECC-CCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEeecC
Q 045127 240 FSKKNLVGKNEGAAIYKGILRD-GTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWTN 318 (508)
Q Consensus 240 ~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 318 (508)
|+..+.||+|++|.||++...+ ++.+++|.+.........+.+.+|++.+++++|+|++++++++......++++||++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE 80 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence 5567899999999999999864 899999999754433356788999999999999999999999998889999999999
Q ss_pred CCCHHHHhccC-C-CCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-------------
Q 045127 319 GGNVELWLSES-A-PSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------------- 383 (508)
Q Consensus 319 ~gsL~~~l~~~-~-l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------------- 383 (508)
+++|.+++... . +++..+..++.+++.++.|||+. +++|+|++|+||+++.++.++++|||.+.
T Consensus 81 ~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~-~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~~~~ 159 (225)
T smart00221 81 GGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSL-GIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAALLKTV 159 (225)
T ss_pred CCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccccccce
Confidence 99999999843 3 89999999999999999999999 99999999999999999999999997532
Q ss_pred ----------------CCCCcchhhHHHHHHHHHHhCCCCCcc
Q 045127 384 ----------------QHRSTKYVYKFGLFLLEMITNRRPLEE 410 (508)
Q Consensus 384 ----------------~~~~~~Dv~SlGvil~elltg~~P~~~ 410 (508)
..+.++||||||++++||++|+.||+.
T Consensus 160 ~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 160 KGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred eccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 223579999999999999999999964
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. |
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.1e-26 Score=219.31 Aligned_cols=175 Identities=17% Similarity=0.194 Sum_probs=149.7
Q ss_pred hcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCH--HHHHHHHHHHHHHhhc-CCCCccceeeEEecCCeeEE
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSR--EIRDEFVEECKLLVQF-QHKNLIRVLGWNNSRRTRAI 312 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~l 312 (508)
..+|.-..+||+|+||.|..|.-+ +.+.+|||+++.+..- +..+--+.|-++|.-- +-|.++++...+.+-+..|+
T Consensus 348 ~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyF 427 (683)
T KOG0696|consen 348 ATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYF 427 (683)
T ss_pred ecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheee
Confidence 346888899999999999999865 4678999999765422 2233345666777665 47889999999999999999
Q ss_pred EEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC---------
Q 045127 313 VTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE--------- 382 (508)
Q Consensus 313 v~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~--------- 382 (508)
||||+.||+|--.++ -+.+.++.++-+|..||-||-|||++ ||+.||||.+|||+|.+|.+||+|||+.
T Consensus 428 VMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~k-gIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~~~T 506 (683)
T KOG0696|consen 428 VMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSK-GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIFDGVT 506 (683)
T ss_pred EEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcC-CeeeeeccccceEeccCCceEeeecccccccccCCcc
Confidence 999999999987777 67788899999999999999999999 9999999999999999999999999873
Q ss_pred ------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccc
Q 045127 383 ------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFE 412 (508)
Q Consensus 383 ------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~ 412 (508)
.+|...+|.|||||+||||+.|++||++..
T Consensus 507 TkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeD 554 (683)
T KOG0696|consen 507 TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGED 554 (683)
T ss_pred eeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCC
Confidence 256678999999999999999999998654
|
|
| >KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.5e-25 Score=222.89 Aligned_cols=172 Identities=14% Similarity=0.202 Sum_probs=148.8
Q ss_pred cCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCH-------HHHHHHHHHHHHHhhcC---CCCccceeeEEec
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSR-------EIRDEFVEECKLLVQFQ---HKNLIRVLGWNNS 306 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-------~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~ 306 (508)
.+|...+.+|.|+||.|+.|.++ +...|+||.+.+..-- ........|+++|..++ |+||++++++|++
T Consensus 561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd 640 (772)
T KOG1152|consen 561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED 640 (772)
T ss_pred ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence 46889999999999999999985 4678899998644211 11233567999999997 9999999999999
Q ss_pred CCeeEEEEeec-CCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC--
Q 045127 307 RRTRAIVTEWT-NGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE-- 382 (508)
Q Consensus 307 ~~~~~lv~e~~-~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~-- 382 (508)
++.+|++||-. ++-+|.+++. +..+++.++.-|++||+.|+++||+. ||||||||-+|+.++.+|-+|++|||.+
T Consensus 641 dd~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~-~ivhrdikdenvivd~~g~~klidfgsaa~ 719 (772)
T KOG1152|consen 641 DDYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQ-GIVHRDIKDENVIVDSNGFVKLIDFGSAAY 719 (772)
T ss_pred CCeeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhcccccccc-CceecccccccEEEecCCeEEEeeccchhh
Confidence 99999999964 5669999998 88899999999999999999999999 9999999999999999999999999863
Q ss_pred ------------------------CCCCCcchhhHHHHHHHHHHhCCCCCcc
Q 045127 383 ------------------------YQHRSTKYVYKFGLFLLEMITNRRPLEE 410 (508)
Q Consensus 383 ------------------------~~~~~~~Dv~SlGvil~elltg~~P~~~ 410 (508)
.......|||++|++||.++....||.+
T Consensus 720 ~ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyyn 771 (772)
T KOG1152|consen 720 TKSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYYN 771 (772)
T ss_pred hcCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence 1224567999999999999999999863
|
|
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=7.8e-26 Score=228.33 Aligned_cols=226 Identities=16% Similarity=0.188 Sum_probs=180.9
Q ss_pred hhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEE
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVT 314 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 314 (508)
..++|+..+.+|+|.||.|||++. ..++..|+|+++-.... ...-..+|+-+++..+||||+.++|-+...+..++.|
T Consensus 13 P~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~d-d~~~iqqei~~~~dc~h~nivay~gsylr~dklwicM 91 (829)
T KOG0576|consen 13 PQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGD-DFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICM 91 (829)
T ss_pred CccchhheeeecCCcccchhhhcccccCchhhheeeeccCCc-cccccccceeeeecCCCcChHHHHhhhhhhcCcEEEE
Confidence 346788999999999999999997 56899999999744332 5667789999999999999999999999999999999
Q ss_pred eecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC----------
Q 045127 315 EWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY---------- 383 (508)
Q Consensus 315 e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~---------- 383 (508)
|||.+|+|++.-+ .+.+++.++..+++..++||+|||+. |-+|||||-.||++++.|.+|++|||.+.
T Consensus 92 EycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~-gk~hRdiKGanilltd~gDvklaDfgvsaqitati~Krk 170 (829)
T KOG0576|consen 92 EYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQ-GKIHRDIKGANILLTDEGDVKLADFGVSAQITATIAKRK 170 (829)
T ss_pred EecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcC-CcccccccccceeecccCceeecccCchhhhhhhhhhhh
Confidence 9999999999887 78899999999999999999999999 99999999999999999999999998743
Q ss_pred --------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcc
Q 045127 384 --------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTEN 443 (508)
Q Consensus 384 --------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 443 (508)
.|...+|||+.|++..|+---++|..+...... +.-..+..+. .+.+.+
T Consensus 171 sfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~-l~LmTkS~~q-------pp~lkD--- 239 (829)
T KOG0576|consen 171 SFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRA-LFLMTKSGFQ-------PPTLKD--- 239 (829)
T ss_pred cccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHH-HHHhhccCCC-------CCcccC---
Confidence 345678999999999999877777543322111 1111111110 111111
Q ss_pred hHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 444 MFDQAEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 444 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
.......+-+++..|+-.+|++|||++.++.
T Consensus 240 k~kws~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 240 KTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred CccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence 1223556778888999999999999987764
|
|
| >KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.6e-24 Score=202.74 Aligned_cols=220 Identities=14% Similarity=0.184 Sum_probs=171.3
Q ss_pred hcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCC--HHHHHHHHHHHHHHhhc-CCCCccceeeEEecCCeeEE
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVS--REIRDEFVEECKLLVQF-QHKNLIRVLGWNNSRRTRAI 312 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~l 312 (508)
.++|...++||+|+|++|..+++ ++.+.+|+|++++..- .+.....+.|-.+..+. +||.+|.+..++.++...++
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlff 328 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFF 328 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEE
Confidence 35789999999999999999997 5678999999975432 23455667787777776 69999999999999999999
Q ss_pred EEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC---------
Q 045127 313 VTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE--------- 382 (508)
Q Consensus 313 v~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~--------- 382 (508)
|.||++||+|--.++ ...++++.+.-+...|+-||.|||++ ||+.||+|.+|+|+|..|.+|+.|+|+.
T Consensus 329 vieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~r-giiyrdlkldnvlldaeghikltdygmcke~l~~gd~ 407 (593)
T KOG0695|consen 329 VIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHER-GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGPGDT 407 (593)
T ss_pred EEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhc-CeeeeeccccceEEccCCceeecccchhhcCCCCCcc
Confidence 999999999976666 77899999999999999999999999 9999999999999999999999999872
Q ss_pred ------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccc--cCcccHHHHHHHhccchhhhhhhhcccCCc
Q 045127 383 ------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFE--RGEAGFIEYIRMHYPENLQLVVDERMMLTE 442 (508)
Q Consensus 383 ------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 442 (508)
..|....|.|++||+++||+.|+.||+-.. +.+.+-..+.-+. ++.+.+.-+.
T Consensus 408 tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqv-------ilekqiripr 480 (593)
T KOG0695|consen 408 TSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQV-------ILEKQIRIPR 480 (593)
T ss_pred cccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHH-------Hhhhcccccc
Confidence 345678899999999999999999998543 2233333333222 2222221110
Q ss_pred chHHHHHHHHHHHHhcCCCCCCCCC
Q 045127 443 NMFDQAEQGLGLGLMCTDQPTGKLP 467 (508)
Q Consensus 443 ~~~~~~~~l~~l~~~Cl~~dP~~RP 467 (508)
....+...+...-+.+||.+|-
T Consensus 481 ---slsvkas~vlkgflnkdp~erl 502 (593)
T KOG0695|consen 481 ---SLSVKASHVLKGFLNKDPKERL 502 (593)
T ss_pred ---eeehhhHHHHHHhhcCCcHHhc
Confidence 1122333455566788999884
|
|
| >KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=6.2e-25 Score=204.89 Aligned_cols=231 Identities=13% Similarity=0.110 Sum_probs=171.2
Q ss_pred hcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCC-HHHHHHHHHHHHHHhhcCCCCccceeeEEecC------C
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVS-REIRDEFVEECKLLVQFQHKNLIRVLGWNNSR------R 308 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------~ 308 (508)
..+|...+.+|.|.- .|..|.+ -.+++||+|....... ....++..+|...+..+.|+||++++.++.-. .
T Consensus 16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~ 94 (369)
T KOG0665|consen 16 PKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQ 94 (369)
T ss_pred eeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHH
Confidence 356777888999988 6666664 3588999998754321 22456778999999999999999999988643 3
Q ss_pred eeEEEEeecCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-----
Q 045127 309 TRAIVTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY----- 383 (508)
Q Consensus 309 ~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~----- 383 (508)
..|+|||+|. ++|...+. ..++..+...|..|++.|++|||+. ||+||||||+||++..++.+||.|||.++
T Consensus 95 e~y~v~e~m~-~nl~~vi~-~elDH~tis~i~yq~~~~ik~lhs~-~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~ 171 (369)
T KOG0665|consen 95 EVYLVMELMD-ANLCQVIL-MELDHETISYILYQMLCGIKHLHSA-GIIHRDLKPSNIVVNSDCTLKILDFGLARTEDTD 171 (369)
T ss_pred hHHHHHHhhh-hHHHHHHH-HhcchHHHHHHHHHHHHHHHHHHhc-ceeecccCcccceecchhheeeccchhhcccCcc
Confidence 5799999995 58988886 6678888999999999999999999 99999999999999999999999998742
Q ss_pred ---------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHh-----------------
Q 045127 384 ---------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMH----------------- 425 (508)
Q Consensus 384 ---------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~----------------- 425 (508)
.+.+.+||||+||++.||++|+.-|.+ +..+-+|.+..
T Consensus 172 ~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g----~d~idQ~~ki~~~lgtpd~~F~~qL~~~ 247 (369)
T KOG0665|consen 172 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPG----KDHIDQWNKIIEQLGTPDPSFMKQLQPT 247 (369)
T ss_pred cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecC----chHHHHHHHHHHHhcCCCHHHHHHhhHH
Confidence 356789999999999999999988863 22233332110
Q ss_pred -------ccch----hhhhhhhc-cc-CCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 426 -------YPEN----LQLVVDER-MM-LTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 426 -------~~~~----~~~~~~~~-l~-~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
.++. +.+.+... +. ..+........+.+++.+|+-.||++|.+++++++.
T Consensus 248 ~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~H 310 (369)
T KOG0665|consen 248 VRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRH 310 (369)
T ss_pred HHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcC
Confidence 0000 11111000 00 000111224455678889999999999999999875
|
|
| >KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.8e-24 Score=211.36 Aligned_cols=236 Identities=13% Similarity=0.104 Sum_probs=179.9
Q ss_pred hhcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcC------CCCccceeeEEecCC
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQ------HKNLIRVLGWNNSRR 308 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~------h~niv~~~~~~~~~~ 308 (508)
.-.+|.+....|+|-|++|.+|... -|..||||+++... ...+.=..|+++|++|. --|+++++..|....
T Consensus 430 LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE--~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hkn 507 (752)
T KOG0670|consen 430 LDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNE--VMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKN 507 (752)
T ss_pred hcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecch--HHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcc
Confidence 4468889999999999999999973 47899999996532 23455678999999995 457999999999999
Q ss_pred eeEEEEeecCCCCHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCC-CceEEeeccCC-
Q 045127 309 TRAIVTEWTNGGNVELWLS----ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDN-LEPLISRFKIE- 382 (508)
Q Consensus 309 ~~~lv~e~~~~gsL~~~l~----~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~-~~~kl~Dfg~~- 382 (508)
+.|+|+|-+ ..+|.++++ ...+....+..++.|+.-||..|-.. ||+|.||||+|||+++. ...||||||.+
T Consensus 508 HLClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c-~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~ 585 (752)
T KOG0670|consen 508 HLCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKC-GVLHADIKPDNILVNESKNILKLCDFGSAS 585 (752)
T ss_pred eeEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhc-CeeecccCccceEeccCcceeeeccCcccc
Confidence 999999987 458999998 45678888999999999999999999 99999999999999965 56899999874
Q ss_pred ------------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcc-cHHHHHHHhccch-------h
Q 045127 383 ------------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEA-GFIEYIRMHYPEN-------L 430 (508)
Q Consensus 383 ------------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~-~~~~~~~~~~~~~-------~ 430 (508)
..|+...|+||.||+||||.||+..|.+..+..+ .+..-++..++.. .
T Consensus 586 ~~~eneitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgqF~ 665 (752)
T KOG0670|consen 586 FASENEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQFK 665 (752)
T ss_pred ccccccccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcchh
Confidence 3566788999999999999999999987554332 1111111111110 0
Q ss_pred hhhhhhc--------------------------------c----cCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 431 QLVVDER--------------------------------M----MLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 431 ~~~~~~~--------------------------------l----~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
.+.+|.. + ............+.+|...|+..||++|.|..+.++
T Consensus 666 dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~ 745 (752)
T KOG0670|consen 666 DQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALK 745 (752)
T ss_pred hhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhc
Confidence 0111110 0 011222345677888999999999999999998876
Q ss_pred H
Q 045127 475 M 475 (508)
Q Consensus 475 ~ 475 (508)
.
T Consensus 746 H 746 (752)
T KOG0670|consen 746 H 746 (752)
T ss_pred C
Confidence 3
|
|
| >KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.3e-23 Score=203.00 Aligned_cols=238 Identities=15% Similarity=0.182 Sum_probs=181.8
Q ss_pred HHHHhhcCCCCCceeeecCCeEEEEEEEC----CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcC-CCCccceeeEEec
Q 045127 232 MLKAATNGFSKKNLVGKNEGAAIYKGILR----DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQ-HKNLIRVLGWNNS 306 (508)
Q Consensus 232 ~l~~~~~~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~ 306 (508)
++....+.|...++||.|.|++||++... ..+.||+|.+.....+ .++..|+++|..+. +.||+++.+++..
T Consensus 30 ~~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p---~ri~~El~~L~~~gG~~ni~~~~~~~rn 106 (418)
T KOG1167|consen 30 DIPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSP---SRILNELEMLYRLGGSDNIIKLNGCFRN 106 (418)
T ss_pred hhhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCc---hHHHHHHHHHHHhccchhhhcchhhhcc
Confidence 34556678999999999999999999863 4678999999766554 56889999999995 9999999999999
Q ss_pred CCeeEEEEeecCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEec-CCCceEEeeccCCC--
Q 045127 307 RRTRAIVTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLT-DNLEPLISRFKIEY-- 383 (508)
Q Consensus 307 ~~~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~-~~~~~kl~Dfg~~~-- 383 (508)
++...+|+||++.....++.. .++..++..+++.+..||+++|.+ |||||||||+|++.+ ..+.-.|.|||++.
T Consensus 107 nd~v~ivlp~~~H~~f~~l~~--~l~~~~i~~Yl~~ll~Al~~~h~~-GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~ 183 (418)
T KOG1167|consen 107 NDQVAIVLPYFEHDRFRDLYR--SLSLAEIRWYLRNLLKALAHLHKN-GIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRY 183 (418)
T ss_pred CCeeEEEecccCccCHHHHHh--cCCHHHHHHHHHHHHHHhhhhhcc-CccccCCCccccccccccCCceEEechhHHHH
Confidence 999999999999988888874 566888999999999999999999 999999999999998 45778999997621
Q ss_pred ----------------------------------------------------------------------CCCCcchhhH
Q 045127 384 ----------------------------------------------------------------------QHRSTKYVYK 393 (508)
Q Consensus 384 ----------------------------------------------------------------------~~~~~~Dv~S 393 (508)
..+++.||||
T Consensus 184 d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws 263 (418)
T KOG1167|consen 184 DGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWS 263 (418)
T ss_pred HhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceee
Confidence 1245789999
Q ss_pred HHHHHHHHHhCCCCCcccccCcccHHHHHHHhcc----------------c--h---hhhh------hh-hcc-cCCc--
Q 045127 394 FGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYP----------------E--N---LQLV------VD-ERM-MLTE-- 442 (508)
Q Consensus 394 lGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~----------------~--~---~~~~------~~-~~l-~~~~-- 442 (508)
.|||++.+++++.||.....+-..+.+.+...-. + . +.+. ++ ..+ ....
T Consensus 264 ~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n 343 (418)
T KOG1167|consen 264 AGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPN 343 (418)
T ss_pred ccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccc
Confidence 9999999999999997655544433332211000 0 0 0000 00 000 0000
Q ss_pred -----chHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 443 -----NMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 443 -----~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
........+.++..+|++.||.+|.|++|.++.
T Consensus 344 ~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkH 381 (418)
T KOG1167|consen 344 TEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKH 381 (418)
T ss_pred eeeccccccccHHHHHHHHHHccCChhhcccHHHHhcC
Confidence 000113367889999999999999999999864
|
|
| >PRK09188 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.1e-22 Score=200.80 Aligned_cols=149 Identities=16% Similarity=0.186 Sum_probs=120.3
Q ss_pred HHhhcCCCCCceeeecCCeEEEEEEEC--CCCEEEEEEecCCC----CHHHHHHHHHHHHHHhhcCCCCccceeeEEecC
Q 045127 234 KAATNGFSKKNLVGKNEGAAIYKGILR--DGTRVKIEIYKGDV----SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSR 307 (508)
Q Consensus 234 ~~~~~~~~~~~~lg~G~~g~V~~~~~~--~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 307 (508)
....++|+..+.||+|+||+||+|.+. +++.||||+..... .......+.+|++++++++|+|+++.+..+
T Consensus 14 ~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~--- 90 (365)
T PRK09188 14 PALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT--- 90 (365)
T ss_pred ccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc---
Confidence 345678999999999999999999874 57888999875331 223466799999999999999998633222
Q ss_pred CeeEEEEeecCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCC-CCCCEEecCCCceEEeeccCCCCCC
Q 045127 308 RTRAIVTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDL-RTGSVLLTDNLEPLISRFKIEYQHR 386 (508)
Q Consensus 308 ~~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dl-kp~NIll~~~~~~kl~Dfg~~~~~~ 386 (508)
...++||||++|++|... .. .. ...++.|+++||+|||++ ||+|||| ||+|||++.++.+||+|||++....
T Consensus 91 ~~~~LVmE~~~G~~L~~~-~~--~~---~~~~~~~i~~aL~~lH~~-gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~ 163 (365)
T PRK09188 91 GKDGLVRGWTEGVPLHLA-RP--HG---DPAWFRSAHRALRDLHRA-GITHNDLAKPQNWLMGPDGEAAVIDFQLASVFR 163 (365)
T ss_pred CCcEEEEEccCCCCHHHh-Cc--cc---hHHHHHHHHHHHHHHHHC-CCeeCCCCCcceEEEcCCCCEEEEECccceecc
Confidence 357999999999999743 11 11 246789999999999999 9999999 9999999999999999999998887
Q ss_pred Ccchhh
Q 045127 387 STKYVY 392 (508)
Q Consensus 387 ~~~Dv~ 392 (508)
.+++.+
T Consensus 164 ~~~~~~ 169 (365)
T PRK09188 164 RRGALY 169 (365)
T ss_pred cCcchh
Confidence 765443
|
|
| >cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.4e-22 Score=183.31 Aligned_cols=140 Identities=17% Similarity=0.150 Sum_probs=111.2
Q ss_pred CceeeecCCeEEEEEEECCCCEEEEEEecCCCCHH-H------------------------HHHHHHHHHHHhhcCCCCc
Q 045127 243 KNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSRE-I------------------------RDEFVEECKLLVQFQHKNL 297 (508)
Q Consensus 243 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~-~------------------------~~~~~~E~~~l~~l~h~ni 297 (508)
...||+|++|.||+|..++|+.||||+++...... . ......|++.+.++.++++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 46799999999999998889999999997542110 0 1123459999999988877
Q ss_pred cceeeEEecCCeeEEEEeecCCCCHHHH-hccCCCCHHHHHHHHHHHHHHHHHH-hhCCCccccCCCCCCEEecCCCceE
Q 045127 298 IRVLGWNNSRRTRAIVTEWTNGGNVELW-LSESAPSWKHRLKVLIGVVEAMCYL-QEQWPEVDYDLRTGSVLLTDNLEPL 375 (508)
Q Consensus 298 v~~~~~~~~~~~~~lv~e~~~~gsL~~~-l~~~~l~~~~~~~i~~~i~~~L~~L-H~~~~iiH~Dlkp~NIll~~~~~~k 375 (508)
.....+... ..++||||++++++... +....++..+...++.|++.+|.|+ |+. ||+||||||+||+++ ++.++
T Consensus 82 ~~p~~~~~~--~~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~-giiHrDlkP~NIli~-~~~v~ 157 (190)
T cd05147 82 PCPEPILLK--SHVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDC-RLVHADLSEYNLLYH-DGKLY 157 (190)
T ss_pred CCCcEEEec--CCEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHEEEE-CCcEE
Confidence 544433222 23899999999877654 4467889999999999999999999 688 999999999999998 57899
Q ss_pred EeeccCCCCCC
Q 045127 376 ISRFKIEYQHR 386 (508)
Q Consensus 376 l~Dfg~~~~~~ 386 (508)
++|||++....
T Consensus 158 LiDFG~a~~~~ 168 (190)
T cd05147 158 IIDVSQSVEHD 168 (190)
T ss_pred EEEccccccCC
Confidence 99999986443
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c |
| >KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.8e-23 Score=188.58 Aligned_cols=224 Identities=20% Similarity=0.343 Sum_probs=174.8
Q ss_pred CCceeeecCCeEEEEEEECCCCEEEEEEec-CCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEeecCCC
Q 045127 242 KKNLVGKNEGAAIYKGILRDGTRVKIEIYK-GDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWTNGG 320 (508)
Q Consensus 242 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~-~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 320 (508)
...+|.....|..|+|+|+ |..+++|++. ++......++|..|.-.++-+.||||+.++|.|..+.+..++..||+.|
T Consensus 194 l~tkl~e~hsgelwrgrwq-gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~g 272 (448)
T KOG0195|consen 194 LITKLAESHSGELWRGRWQ-GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFG 272 (448)
T ss_pred hhhhhccCCCccccccccc-CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccch
Confidence 3467888999999999996 5556667764 3444456678999999999999999999999999999999999999999
Q ss_pred CHHHHhccC---CCCHHHHHHHHHHHHHHHHHHhhCCCcccc-CCCCCCEEecCCCceEEe--e--ccC---CCCC----
Q 045127 321 NVELWLSES---APSWKHRLKVLIGVVEAMCYLQEQWPEVDY-DLRTGSVLLTDNLEPLIS--R--FKI---EYQH---- 385 (508)
Q Consensus 321 sL~~~l~~~---~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~-Dlkp~NIll~~~~~~kl~--D--fg~---~~~~---- 385 (508)
+|+..+++. .++..++++++.++++|++|||+.-+++-| -+....++||++.+++|+ | |.+ ++.|
T Consensus 273 slynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltarismad~kfsfqe~gr~y~paw 352 (448)
T KOG0195|consen 273 SLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMADTKFSFQEVGRAYSPAW 352 (448)
T ss_pred HHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheecccceeeeeccccccCccc
Confidence 999999833 357889999999999999999997655543 688899999999988875 3 211 1111
Q ss_pred --------------CCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHHHHH
Q 045127 386 --------------RSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQAEQG 451 (508)
Q Consensus 386 --------------~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l 451 (508)
-.++|+|||++++||+.|++.||.+.+..+..+.-.. +.+.-.+.| .....+
T Consensus 353 mspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkial-----eglrv~ipp---------gis~hm 418 (448)
T KOG0195|consen 353 MSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIAL-----EGLRVHIPP---------GISRHM 418 (448)
T ss_pred CCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhh-----ccccccCCC---------CccHHH
Confidence 2468999999999999999999998776554332221 111111222 124456
Q ss_pred HHHHHhcCCCCCCCCCCHHHHHHHHHHHH
Q 045127 452 LGLGLMCTDQPTGKLPSLVQIYNMITRAY 480 (508)
Q Consensus 452 ~~l~~~Cl~~dP~~RPs~~evl~~L~~i~ 480 (508)
.+++.-|+..||.+||.++.|+-.|+++.
T Consensus 419 ~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 419 NKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred HHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 67888899999999999999999998864
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.3e-22 Score=225.96 Aligned_cols=165 Identities=15% Similarity=0.193 Sum_probs=119.7
Q ss_pred cCC-CCccceeeEEe-------cCCeeEEEEeecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCC
Q 045127 292 FQH-KNLIRVLGWNN-------SRRTRAIVTEWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDL 361 (508)
Q Consensus 292 l~h-~niv~~~~~~~-------~~~~~~lv~e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dl 361 (508)
++| +||.++++++. ..+..+.++||+ +++|.+++. ...+++.++..++.||++||+|||++ ||+||||
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~-gIvHrDl 106 (793)
T PLN00181 29 LSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQ-GIVVHNV 106 (793)
T ss_pred hhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhC-CeeeccC
Confidence 445 57777888762 234567778887 669999997 45689999999999999999999999 9999999
Q ss_pred CCCCEEecC-------------------CCceEEeeccCCC---------------------------------------
Q 045127 362 RTGSVLLTD-------------------NLEPLISRFKIEY--------------------------------------- 383 (508)
Q Consensus 362 kp~NIll~~-------------------~~~~kl~Dfg~~~--------------------------------------- 383 (508)
||+|||++. ++.+|++|||+++
T Consensus 107 KP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~ 186 (793)
T PLN00181 107 RPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEE 186 (793)
T ss_pred CchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhh
Confidence 999999953 4567778887542
Q ss_pred ----CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHHHHHHHHHHhcC
Q 045127 384 ----QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCT 459 (508)
Q Consensus 384 ----~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl 459 (508)
.++.++|||||||++|||++|..|+..... .+...... ...+.. .........++.+||
T Consensus 187 ~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~---~~~~~~~~--------~~~~~~------~~~~~~~~~~~~~~L 249 (793)
T PLN00181 187 DNGSSSNCASDVYRLGVLLFELFCPVSSREEKSR---TMSSLRHR--------VLPPQI------LLNWPKEASFCLWLL 249 (793)
T ss_pred hccCCCCchhhhhhHHHHHHHHhhCCCchhhHHH---HHHHHHHh--------hcChhh------hhcCHHHHHHHHHhC
Confidence 235688999999999999999888653110 01111000 111110 111233456778999
Q ss_pred CCCCCCCCCHHHHHHH
Q 045127 460 DQPTGKLPSLVQIYNM 475 (508)
Q Consensus 460 ~~dP~~RPs~~evl~~ 475 (508)
+++|.+||++.|+++.
T Consensus 250 ~~~P~~Rps~~eil~h 265 (793)
T PLN00181 250 HPEPSCRPSMSELLQS 265 (793)
T ss_pred CCChhhCcChHHHhhc
Confidence 9999999999999864
|
|
| >KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.87 E-value=2e-21 Score=174.67 Aligned_cols=172 Identities=13% Similarity=0.209 Sum_probs=149.6
Q ss_pred hhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcC-CCCccceeeEEecCCeeEEE
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQ-HKNLIRVLGWNNSRRTRAIV 313 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv 313 (508)
..+.|...++||+|+||.+|.|.. .+|+.||||+-..... ..++..|.++.+.++ ...|..+..|..+...-.+|
T Consensus 13 v~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~---hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlV 89 (341)
T KOG1163|consen 13 VGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAK---HPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLV 89 (341)
T ss_pred eccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCC---CcchhHHHHHHHHhccCCCCchhhhhccccccceee
Confidence 346899999999999999999985 7899999999865433 256788999999997 57788888888888888999
Q ss_pred EeecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEec---CCCceEEeeccCCCCC---
Q 045127 314 TEWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLT---DNLEPLISRFKIEYQH--- 385 (508)
Q Consensus 314 ~e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~---~~~~~kl~Dfg~~~~~--- 385 (508)
|+.+ |.+|+++.. ...++..+++.++-|++.-++|+|.+ +++||||||+|+|+. ....+.++|||+++++
T Consensus 90 MdLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r-~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~ 167 (341)
T KOG1163|consen 90 MDLL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLR-NFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDI 167 (341)
T ss_pred eecc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhh-ccccccCCccceeeccccccceEEEEeccchhhhccc
Confidence 9988 889999988 78899999999999999999999999 999999999999987 3467899999986432
Q ss_pred -------------------------------CCcchhhHHHHHHHHHHhCCCCCcccc
Q 045127 386 -------------------------------RSTKYVYKFGLFLLEMITNRRPLEEFE 412 (508)
Q Consensus 386 -------------------------------~~~~Dv~SlGvil~elltg~~P~~~~~ 412 (508)
+.+.|+-|+|.+|.+.--|..||++..
T Consensus 168 ~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglk 225 (341)
T KOG1163|consen 168 RTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLK 225 (341)
T ss_pred cccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccc
Confidence 346799999999999999999998754
|
|
| >PRK10359 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=7.3e-22 Score=183.38 Aligned_cols=157 Identities=11% Similarity=0.085 Sum_probs=127.8
Q ss_pred hhcCCCCCceeeecCCeEEEEEEECCCCEEEEEEecCCCCHH--HHHH------HHHHHHHHhhcCCCCccceeeEEecC
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSRE--IRDE------FVEECKLLVQFQHKNLIRVLGWNNSR 307 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~--~~~~------~~~E~~~l~~l~h~niv~~~~~~~~~ 307 (508)
..++|+..+.+|.|+||.||.+.. ++..+|+|.+++..... .... +.+|+..+.++.||+|..+.+++...
T Consensus 29 l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~ 107 (232)
T PRK10359 29 LSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLA 107 (232)
T ss_pred hhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeec
Confidence 357899999999999999999765 57789999997544331 2222 68999999999999999999886633
Q ss_pred --------CeeEEEEeecCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeec
Q 045127 308 --------RTRAIVTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRF 379 (508)
Q Consensus 308 --------~~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Df 379 (508)
...+++|||++|.+|.++.. ++. ....+++.++..+|+. |++|||+||+||+++.++ ++++||
T Consensus 108 ~~~~~~~~~~~~lvmEyi~G~tL~~~~~---~~~----~~~~~i~~~l~~lH~~-gi~H~Dikp~Nili~~~g-i~liDf 178 (232)
T PRK10359 108 ERKTLRYAHTYIMLIEYIEGVELNDMPE---ISE----DVKAKIKASIESLHQH-GMVSGDPHKGNFIVSKNG-LRIIDL 178 (232)
T ss_pred ccccccccCCeEEEEEEECCccHHHhhh---ccH----HHHHHHHHHHHHHHHc-CCccCCCChHHEEEeCCC-EEEEEC
Confidence 35789999999999988742 222 3456999999999999 999999999999999888 999999
Q ss_pred cCCC---------------CCCCcchhhHHHHHHHHHH
Q 045127 380 KIEY---------------QHRSTKYVYKFGLFLLEMI 402 (508)
Q Consensus 380 g~~~---------------~~~~~~Dv~SlGvil~ell 402 (508)
|... .+..++|+||||+++....
T Consensus 179 g~~~~~~e~~a~d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 179 SGKRCTAQRKAKDRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred CCcccccchhhHHHHHHHhHhcccccccceeEeehHHH
Confidence 8743 3446899999999887654
|
|
| >smart00750 KIND kinase non-catalytic C-lobe domain | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.6e-21 Score=174.69 Aligned_cols=146 Identities=13% Similarity=0.068 Sum_probs=108.5
Q ss_pred CCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC---------------
Q 045127 320 GNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE--------------- 382 (508)
Q Consensus 320 gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~--------------- 382 (508)
|+|.+++. +..+++.++..|+.|++.||+|||++ + ||+||+++.++.+|+ ||.+
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~-~------kp~Nil~~~~~~~~~--fG~~~~~~~~~~~g~~~y~ 71 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQ-A------KSGNILLTWDGLLKL--DGSVAFKTPEQSRVDPYFM 71 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhc-C------CcccEeEcCccceee--ccceEeeccccCCCccccc
Confidence 68999997 45699999999999999999999999 7 999999999999998 8763
Q ss_pred -------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHH--HHHHH
Q 045127 383 -------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQA--EQGLG 453 (508)
Q Consensus 383 -------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~l~~ 453 (508)
..++.++|||||||++|||+||+.||.........+.......... ++ .......... ..+.+
T Consensus 72 aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~------~~--~~~~~~~~~~~~~~~~~ 143 (176)
T smart00750 72 APEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPAD------DP--RDRSNLESVSAARSFAD 143 (176)
T ss_pred ChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccC------Cc--cccccHHHHHhhhhHHH
Confidence 3456789999999999999999999965432221122211111100 00 0000111112 26889
Q ss_pred HHHhcCCCCCCCCCCHHHHHHHHHHHHhh
Q 045127 454 LGLMCTDQPTGKLPSLVQIYNMITRAYKS 482 (508)
Q Consensus 454 l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 482 (508)
++.+||+.+|.+||++.|+++.+..+...
T Consensus 144 ~i~~cl~~~p~~Rp~~~~ll~~~~~~~~~ 172 (176)
T smart00750 144 FMRVCASRLPQRREAANHYLAHCRALFAE 172 (176)
T ss_pred HHHHHHhcccccccCHHHHHHHHHHHHHH
Confidence 99999999999999999999998877543
|
It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features |
| >cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain | Back alignment and domain information |
|---|
Probab=99.86 E-value=9.2e-21 Score=174.30 Aligned_cols=141 Identities=16% Similarity=0.141 Sum_probs=114.3
Q ss_pred CceeeecCCeEEEEEEECCCCEEEEEEecCCCCH-------------------------HHHHHHHHHHHHHhhcCCCCc
Q 045127 243 KNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSR-------------------------EIRDEFVEECKLLVQFQHKNL 297 (508)
Q Consensus 243 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~-------------------------~~~~~~~~E~~~l~~l~h~ni 297 (508)
...||+|++|.||+|...+|+.||||+++..... .....+.+|.+.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4689999999999999878999999999754211 002234688999999999988
Q ss_pred cceeeEEecCCeeEEEEeecCCCCHHH-HhccCCCCHHHHHHHHHHHHHHHHHHhh-CCCccccCCCCCCEEecCCCceE
Q 045127 298 IRVLGWNNSRRTRAIVTEWTNGGNVEL-WLSESAPSWKHRLKVLIGVVEAMCYLQE-QWPEVDYDLRTGSVLLTDNLEPL 375 (508)
Q Consensus 298 v~~~~~~~~~~~~~lv~e~~~~gsL~~-~l~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~iiH~Dlkp~NIll~~~~~~k 375 (508)
.....+.... .++||||++++++.. .+....++..+...++.|++.++.++|+ . ||+||||||+||+++ ++.++
T Consensus 82 ~~p~~~~~~~--~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~-givHrDlkP~NIll~-~~~~~ 157 (190)
T cd05145 82 PVPEPILLKK--NVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQEA-GLVHGDLSEYNILYH-DGKPY 157 (190)
T ss_pred CCceEEEecC--CEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHhC-CEecCCCChhhEEEE-CCCEE
Confidence 6555544332 489999999885543 3556678888999999999999999999 8 999999999999999 89999
Q ss_pred EeeccCCCCCCC
Q 045127 376 ISRFKIEYQHRS 387 (508)
Q Consensus 376 l~Dfg~~~~~~~ 387 (508)
++|||++.....
T Consensus 158 liDFG~a~~~~~ 169 (190)
T cd05145 158 IIDVSQAVELDH 169 (190)
T ss_pred EEEcccceecCC
Confidence 999999876653
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro |
| >KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.2e-20 Score=184.31 Aligned_cols=231 Identities=13% Similarity=0.155 Sum_probs=172.6
Q ss_pred CCCCCceeeecCCeEEEEEEECC--CCEEEEEEecCCCCHHHHHHHHHHHHHHhhcC----CCCccceeeEE-ecCCeeE
Q 045127 239 GFSKKNLVGKNEGAAIYKGILRD--GTRVKIEIYKGDVSREIRDEFVEECKLLVQFQ----HKNLIRVLGWN-NSRRTRA 311 (508)
Q Consensus 239 ~~~~~~~lg~G~~g~V~~~~~~~--~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~----h~niv~~~~~~-~~~~~~~ 311 (508)
+|.+.+.||+|+||.||.+.... ...+|+|........... .+..|..++..+. .+++..+++.. ..+...+
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~-~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~ 97 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPS-VLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNF 97 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCc-cchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeE
Confidence 79999999999999999999754 357899988654332222 6788899988886 36899999988 4777889
Q ss_pred EEEeecCCCCHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCC-----CceEEeeccCCC
Q 045127 312 IVTEWTNGGNVELWLS---ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDN-----LEPLISRFKIEY 383 (508)
Q Consensus 312 lv~e~~~~gsL~~~l~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~-----~~~kl~Dfg~~~ 383 (508)
+||+.+ |.+|.++.. ...++..+..+|+.|++.+|++||+. |++||||||+|+++... ..+.+.|||+++
T Consensus 98 iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~-G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar 175 (322)
T KOG1164|consen 98 IVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSK-GFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLAR 175 (322)
T ss_pred EEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhc-CcccCCcCHHHeeecCCCCcccceEEEEecCCCc
Confidence 999987 889999875 36899999999999999999999999 99999999999999854 468999999976
Q ss_pred --CC-----------------------------------CCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhc
Q 045127 384 --QH-----------------------------------RSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHY 426 (508)
Q Consensus 384 --~~-----------------------------------~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~ 426 (508)
++ +.+.|+||++.++.|++.|..||........ ..+......
T Consensus 176 ~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~-~~~~~~~~~ 254 (322)
T KOG1164|consen 176 RFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDL-KSKFEKDPR 254 (322)
T ss_pred cccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccch-HHHHHHHhh
Confidence 21 2356999999999999999999965442211 111110000
Q ss_pred cchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhC
Q 045127 427 PENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSC 483 (508)
Q Consensus 427 ~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 483 (508)
...... . .. .....+.++...+-..+..++|....+...+++.....
T Consensus 255 ----~~~~~~-~--~~---~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~~ 301 (322)
T KOG1164|consen 255 ----KLLTDR-F--GD---LKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDSE 301 (322)
T ss_pred ----hhcccc-c--cC---CChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHhc
Confidence 000000 0 01 11233444444455689999999999999998887765
|
|
| >PRK10345 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.1e-19 Score=168.26 Aligned_cols=138 Identities=13% Similarity=0.165 Sum_probs=109.0
Q ss_pred CCCCceeeecCCeEEEEEEECCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhc-----CCCCccceeeEEecCC---e-e
Q 045127 240 FSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQF-----QHKNLIRVLGWNNSRR---T-R 310 (508)
Q Consensus 240 ~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~~~~~~~~~~---~-~ 310 (508)
.+..+.||+|+||.||. +++....+||++...... ..+.+.+|+.+++.+ .||||++++|++.++. . +
T Consensus 4 L~~~~~LG~G~~~~Vy~--hp~~~~k~IKv~~~~~~~-~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~ 80 (210)
T PRK10345 4 LSEQSPLGTGRHRKCYA--HPEDAQRCIKIVYHRGDG-GDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVY 80 (210)
T ss_pred cCCcceecCCCceEEEE--CCCCcCeEEEEEeccccc-hHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEE
Confidence 34568999999999995 543333479988643222 456789999999999 5799999999999863 3 3
Q ss_pred EEEEee--cCCCCHHHHhccCCCCHHHHHHHHHHHHHHH-HHHhhCCCccccCCCCCCEEecC----CCceEEeeccCCC
Q 045127 311 AIVTEW--TNGGNVELWLSESAPSWKHRLKVLIGVVEAM-CYLQEQWPEVDYDLRTGSVLLTD----NLEPLISRFKIEY 383 (508)
Q Consensus 311 ~lv~e~--~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L-~~LH~~~~iiH~Dlkp~NIll~~----~~~~kl~Dfg~~~ 383 (508)
.+|||| +++|+|.+++....+++. ..++.|++.++ +|||++ +|+||||||+|||++. +..++|+||+.+.
T Consensus 81 ~~I~e~~G~~~~tL~~~l~~~~~~e~--~~~~~~~L~~l~~yLh~~-~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~~ 157 (210)
T PRK10345 81 DVIADFDGKPSITLTEFAEQCRYEED--VAQLRQLLKKLKRYLLDN-RIVTMELKPQNILCQRISESEVIPVVCDNIGES 157 (210)
T ss_pred EEEecCCCCcchhHHHHHHcccccHh--HHHHHHHHHHHHHHHHHC-CEeecCCCHHHEEEeccCCCCCcEEEEECCCCc
Confidence 378999 667999999986666655 35678888888 999999 9999999999999974 3489999955443
|
|
| >KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.81 E-value=7.3e-19 Score=165.10 Aligned_cols=228 Identities=11% Similarity=0.116 Sum_probs=172.9
Q ss_pred cCCCCCceeeecCCeEEEEEE-ECCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcC-CCCccceeeEEecCCeeEEEEe
Q 045127 238 NGFSKKNLVGKNEGAAIYKGI-LRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQ-HKNLIRVLGWNNSRRTRAIVTE 315 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e 315 (508)
-.|+++++||+|.||.++.|+ +-++++||||.-.... ...++..|.+..+.|. .++|..++-|...+-+-.+|+|
T Consensus 28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS---~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVid 104 (449)
T KOG1165|consen 28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS---EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVID 104 (449)
T ss_pred ccceeccccccCcceeeecccccccCceEEEEeccccC---CcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhh
Confidence 368999999999999999998 4679999999874332 3457788899888884 7999999888888888899999
Q ss_pred ecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecC-----CCceEEeeccCCCCC---
Q 045127 316 WTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTD-----NLEPLISRFKIEYQH--- 385 (508)
Q Consensus 316 ~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~-----~~~~kl~Dfg~~~~~--- 385 (508)
.+ |.||+++.. +..++..+++.+|.|++.-++|+|++ ..|.|||||+|+||.. ...+.++|||+++.|
T Consensus 105 LL-GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k-~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp 182 (449)
T KOG1165|consen 105 LL-GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEK-DLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDP 182 (449)
T ss_pred hh-CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhc-ceeecccCccceeecCCCCCCCceEEEEeccchhhhcCc
Confidence 88 889999988 88999999999999999999999999 9999999999999974 345889999986432
Q ss_pred -------------------------------CCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccc----hh
Q 045127 386 -------------------------------RSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPE----NL 430 (508)
Q Consensus 386 -------------------------------~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~----~~ 430 (508)
+.+.|.-|+|-++++.+-|..||.+..... ..+-.+..-.. .+
T Consensus 183 ~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~t--nK~kYeKIGe~Kr~T~i 260 (449)
T KOG1165|consen 183 KTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADT--NKEKYEKIGETKRSTPI 260 (449)
T ss_pred cccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcc--hHHHHHHhccccccCCH
Confidence 456799999999999999999998754221 11111111000 01
Q ss_pred hhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhh
Q 045127 431 QLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKS 482 (508)
Q Consensus 431 ~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 482 (508)
.++. ....++....++.+. ..+-.+-|..+-+...+.++.+.
T Consensus 261 ~~Lc-------~g~P~efa~Yl~yvR---~L~F~E~PDYdylr~Lf~dvldr 302 (449)
T KOG1165|consen 261 EVLC-------EGFPEEFATYLRYVR---RLDFFETPDYDYLRKLFDDVLDR 302 (449)
T ss_pred HHHH-------hcCHHHHHHHHHHHH---hcCcccCCCHHHHHHHHHHHHHh
Confidence 1111 112334444444444 34667788888777777777654
|
|
| >PRK12274 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=8e-19 Score=159.69 Aligned_cols=131 Identities=12% Similarity=0.057 Sum_probs=104.9
Q ss_pred CCCceeeecCCeEEEEEEECCCCEEEEEEecCCCCH---HHHHHHHHHHHHHhhcC-CCCccceeeEEecCCeeEEEEee
Q 045127 241 SKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSR---EIRDEFVEECKLLVQFQ-HKNLIRVLGWNNSRRTRAIVTEW 316 (508)
Q Consensus 241 ~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~ 316 (508)
.+...|++|+||+||.+.. .+..++.+.+...... -....+.+|+++|+++. |+++++++++ ...+++|||
T Consensus 5 ~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmey 79 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSY 79 (218)
T ss_pred ccceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEee
Confidence 4568899999999997665 5778887777543221 11235789999999995 5889999886 346899999
Q ss_pred cCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCC-CCCCEEecCCCceEEeeccCCC
Q 045127 317 TNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDL-RTGSVLLTDNLEPLISRFKIEY 383 (508)
Q Consensus 317 ~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dl-kp~NIll~~~~~~kl~Dfg~~~ 383 (508)
++|.+|.+.... ....++.|++++|+++|++ ||+|||| ||+|||++.++.++|+|||++.
T Consensus 80 I~G~~L~~~~~~------~~~~~~~qi~~~L~~lH~~-GIvHrDL~kp~NILv~~~g~i~LIDFG~A~ 140 (218)
T PRK12274 80 LAGAAMYQRPPR------GDLAYFRAARRLLQQLHRC-GVAHNDLAKEANWLVQEDGSPAVIDFQLAV 140 (218)
T ss_pred ecCccHHhhhhh------hhHHHHHHHHHHHHHHHHC-cCccCCCCCcceEEEcCCCCEEEEECCCce
Confidence 999999765421 1245788999999999999 9999999 7999999999999999999864
|
|
| >COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.2e-18 Score=170.53 Aligned_cols=228 Identities=15% Similarity=0.215 Sum_probs=174.3
Q ss_pred CCCCceeeecCCeEEEEEEECCCCEEEEEEecCCCCHH--HHHHHHHHHHHHhhcCCC-CccceeeEEecCCeeEEEEee
Q 045127 240 FSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSRE--IRDEFVEECKLLVQFQHK-NLIRVLGWNNSRRTRAIVTEW 316 (508)
Q Consensus 240 ~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~E~~~l~~l~h~-niv~~~~~~~~~~~~~lv~e~ 316 (508)
|...+.||.|+||.||++... ..+++|.+....... ....+.+|...++.+.|+ +++++.+++......++++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 567789999999999999986 788999987554433 477899999999999988 799999999777778999999
Q ss_pred cCCCCHHHHhccC----CCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCC-ceEEeeccCC---------
Q 045127 317 TNGGNVELWLSES----APSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNL-EPLISRFKIE--------- 382 (508)
Q Consensus 317 ~~~gsL~~~l~~~----~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~-~~kl~Dfg~~--------- 382 (508)
+.++++.+++... .++......++.|++.++.|+|+. +++|||+||+||+++..+ .++++|||.+
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~-~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~ 158 (384)
T COG0515 80 VDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSK-GIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGST 158 (384)
T ss_pred CCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCcc
Confidence 9999999777743 689999999999999999999999 999999999999999888 7999999853
Q ss_pred ---------------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccC--cccHHHHHHHhccchhhhh
Q 045127 383 ---------------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERG--EAGFIEYIRMHYPENLQLV 433 (508)
Q Consensus 383 ---------------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~--~~~~~~~~~~~~~~~~~~~ 433 (508)
...+...|+||+|++++++++|..||...... .......+...... .
T Consensus 159 ~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~----~ 234 (384)
T COG0515 159 SSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTP----S 234 (384)
T ss_pred ccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCc----c
Confidence 13445679999999999999999997643321 11111111111111 0
Q ss_pred hhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 434 VDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 434 ~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
.......... ......+.+++..|+..+|..|.++.+....
T Consensus 235 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 235 LASPLSPSNP-ELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred cccccCcccc-chhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 0000000000 1123466778888999999999999887765
|
|
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.1e-20 Score=200.60 Aligned_cols=218 Identities=12% Similarity=0.077 Sum_probs=163.1
Q ss_pred CCCCCceeeecCCeEEEEEEECCCCEEEEEEecCCCCH---HHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEe
Q 045127 239 GFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSR---EIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTE 315 (508)
Q Consensus 239 ~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 315 (508)
+|.-.+.||++.|=+|.+|+++.|. |+||++-..... ....+-..|++ ...++|||++++.-+.......|+|-+
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvRq 101 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVRQ 101 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHHH
Confidence 5666788999999999999998777 889998544322 22333344444 555689999999888777788889989
Q ss_pred ecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccC-------------
Q 045127 316 WTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKI------------- 381 (508)
Q Consensus 316 ~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~------------- 381 (508)
|... +|.|.+. ..-+...+..-|+.|++.||..+|.. ||+|||||.+||||+.-.-+.|+||..
T Consensus 102 yvkh-nLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~-gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNPad 179 (1431)
T KOG1240|consen 102 YVKH-NLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKL-GVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNPAD 179 (1431)
T ss_pred HHhh-hhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHc-CccccccccceEEEeeechhhhhcccccCCccCCCCCccc
Confidence 9865 8999988 45567888899999999999999999 999999999999999999999999921
Q ss_pred --------------------------------CCCCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccc
Q 045127 382 --------------------------------EYQHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPE 428 (508)
Q Consensus 382 --------------------------------~~~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~ 428 (508)
+...+++.||||+||++.||++ |++||.-. ++..|-... .
T Consensus 180 f~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LS-----QL~aYr~~~--~ 252 (1431)
T KOG1240|consen 180 FTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLS-----QLLAYRSGN--A 252 (1431)
T ss_pred ceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHH-----HHHhHhccC--c
Confidence 1125678899999999999998 68888621 122221111 1
Q ss_pred hhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 429 NLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 429 ~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
...+.+=..+. -..+.++++.|++.||++|-++++.++.
T Consensus 253 ~~~e~~Le~Ie--------d~~~Rnlil~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 253 DDPEQLLEKIE--------DVSLRNLILSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred cCHHHHHHhCc--------CccHHHHHHHHHccCchhccCHHHHHHh
Confidence 01111111111 1245678889999999999999999987
|
|
| >PRK14879 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.8e-18 Score=161.89 Aligned_cols=147 Identities=15% Similarity=0.148 Sum_probs=119.9
Q ss_pred ceeeecCCeEEEEEEECCCCEEEEEEecCCCCH-------HHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEee
Q 045127 244 NLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSR-------EIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEW 316 (508)
Q Consensus 244 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~-------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 316 (508)
+.||+|++|.||+|.+ +|..|++|+....... .....+.+|++++..+.|+++.....++......+++|||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 5799999999999988 5778999987533211 1234678999999999999998888777777788999999
Q ss_pred cCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCCCCCCcchhhHHHH
Q 045127 317 TNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEYQHRSTKYVYKFGL 396 (508)
Q Consensus 317 ~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~Dv~SlGv 396 (508)
++|++|.+++.... + .+..++.+++.+|.++|+. +++|||++|+||+++ ++.++++|||.+.... +++.+++
T Consensus 81 ~~G~~L~~~~~~~~--~-~~~~i~~~i~~~l~~lH~~-~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~~~---~~~~~~~ 152 (211)
T PRK14879 81 IEGEPLKDLINSNG--M-EELELSREIGRLVGKLHSA-GIIHGDLTTSNMILS-GGKIYLIDFGLAEFSK---DLEDRAV 152 (211)
T ss_pred eCCcCHHHHHHhcc--H-HHHHHHHHHHHHHHHHHhC-CcccCCCCcccEEEE-CCCEEEEECCcccCCC---cHHhhhc
Confidence 99999999986322 2 7889999999999999999 999999999999999 8899999999876532 3444454
Q ss_pred HHH
Q 045127 397 FLL 399 (508)
Q Consensus 397 il~ 399 (508)
-++
T Consensus 153 ~~~ 155 (211)
T PRK14879 153 DLH 155 (211)
T ss_pred cHH
Confidence 443
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.79 E-value=5.9e-20 Score=195.01 Aligned_cols=225 Identities=13% Similarity=0.089 Sum_probs=162.6
Q ss_pred CCCceeeecCCeEEEEEEE-CCCCEEEEEEec----CCCCH-HHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEE
Q 045127 241 SKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYK----GDVSR-EIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVT 314 (508)
Q Consensus 241 ~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~----~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 314 (508)
.....+|.|++|.|+.+.. .....++.|.++ ..... .....+..|+.+-..+.|||++..+..+.+.....-+|
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~m 400 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSM 400 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhh
Confidence 4568899999998877764 334444444432 22222 22333777888888899999988877776665555569
Q ss_pred eecCCCCHHHHhccC-CCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC----------
Q 045127 315 EWTNGGNVELWLSES-APSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY---------- 383 (508)
Q Consensus 315 e~~~~gsL~~~l~~~-~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~---------- 383 (508)
|||++ +|..++... .+...++..++.|++.|++|+|+. |+.|||+||+|++++.+|.+||+|||.+.
T Consensus 401 E~~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~-GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~~ 478 (601)
T KOG0590|consen 401 EYCPY-DLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSM-GLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEKNI 478 (601)
T ss_pred hcccH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHHhc-CceeccCccccEEEecCCceEEeecCcceeeccCcchhh
Confidence 99999 999999854 899999999999999999999999 99999999999999999999999997631
Q ss_pred ---------------------CC-CCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCC
Q 045127 384 ---------------------QH-RSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLT 441 (508)
Q Consensus 384 ---------------------~~-~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 441 (508)
.+ ....||||.|+++..|++|+.||......+..+.. .......... ..+
T Consensus 479 ~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~---~~~~~~~~~~-----~~~ 550 (601)
T KOG0590|consen 479 HESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKT---NNYSDQRNIF-----EGP 550 (601)
T ss_pred hhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhh---hccccccccc-----cCh
Confidence 11 23579999999999999999999765544332200 0000000000 000
Q ss_pred cc-hHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 442 EN-MFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 442 ~~-~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
.. ......+...++.++++.||.+|.|+++|++.
T Consensus 551 ~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d 585 (601)
T KOG0590|consen 551 NRLLSLLPRETRIIIYRMLQLDPTKRITIEQILND 585 (601)
T ss_pred HHHHHhchhhHHHHHHHHccCChhheecHHHHhhC
Confidence 00 01224455678889999999999999999864
|
|
| >smart00090 RIO RIO-like kinase | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.8e-18 Score=162.73 Aligned_cols=145 Identities=15% Similarity=0.208 Sum_probs=114.9
Q ss_pred CCCCCceeeecCCeEEEEEE--ECCCCEEEEEEecCCCCH-----------------------HHHHHHHHHHHHHhhcC
Q 045127 239 GFSKKNLVGKNEGAAIYKGI--LRDGTRVKIEIYKGDVSR-----------------------EIRDEFVEECKLLVQFQ 293 (508)
Q Consensus 239 ~~~~~~~lg~G~~g~V~~~~--~~~~~~vavK~~~~~~~~-----------------------~~~~~~~~E~~~l~~l~ 293 (508)
.|++.+.||+|++|.||+|. ..+|+.||+|+++..... .....+.+|++.+.++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 47788999999999999998 468999999998743210 01234678999999997
Q ss_pred CC--CccceeeEEecCCeeEEEEeecCCCCHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHhhCCC-ccccCCCCCCEEec
Q 045127 294 HK--NLIRVLGWNNSRRTRAIVTEWTNGGNVELWL-SESAPSWKHRLKVLIGVVEAMCYLQEQWP-EVDYDLRTGSVLLT 369 (508)
Q Consensus 294 h~--niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~-iiH~Dlkp~NIll~ 369 (508)
+. .+++++++ ...++||||++++++.... ........+...++.|++.++++||+. | ++||||||+||+++
T Consensus 109 ~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~-g~iiH~Dikp~NIli~ 183 (237)
T smart00090 109 EAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKE-GELVHGDLSEYNILVH 183 (237)
T ss_pred hcCCCCCeeeEe----cCceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhc-CCEEeCCCChhhEEEE
Confidence 53 34444443 2348999999998887665 345566667789999999999999999 9 99999999999999
Q ss_pred CCCceEEeeccCCCCCCCcc
Q 045127 370 DNLEPLISRFKIEYQHRSTK 389 (508)
Q Consensus 370 ~~~~~kl~Dfg~~~~~~~~~ 389 (508)
++.++++|||.+.....+.
T Consensus 184 -~~~i~LiDFg~a~~~~~~~ 202 (237)
T smart00090 184 -DGKVVIIDVSQSVELDHPM 202 (237)
T ss_pred -CCCEEEEEChhhhccCCcc
Confidence 8899999999987665553
|
|
| >KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.78 E-value=8.3e-19 Score=168.24 Aligned_cols=225 Identities=16% Similarity=0.193 Sum_probs=155.4
Q ss_pred hcCCCCCceeeecCCeEEEEEEECC-CC-----------------------------------EEEEEEecC----CCCH
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGILRD-GT-----------------------------------RVKIEIYKG----DVSR 276 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~~~-~~-----------------------------------~vavK~~~~----~~~~ 276 (508)
.++|++++.||+|..+.||.|.+++ |. +.|+|.+.. ....
T Consensus 156 iddyeiG~~igkGC~AaVY~A~~~~dg~~le~~~~t~~~pgf~p~ts~p~e~~q~~~p~~~aFPLAiKmMfN~~~~s~~~ 235 (598)
T KOG4158|consen 156 IDDYEIGEFIGKGCNAAVYSARLANDGSDLESSGNTHYGPGFNPVTSIPAEIPQVSKPAQKAFPLAIKMMFNFEHDSGDA 235 (598)
T ss_pred hhhhcccchhhccchhhhhhhhcCCCcccccccCCCCcCCCcCCCcCCcccCCcccCccccccchHHHHhcccccCCchH
Confidence 3568899999999999999988643 11 356776531 1111
Q ss_pred HHHHHHHHHHH--------------HHhh--------cCCCCccceeeEEec---------------------------C
Q 045127 277 EIRDEFVEECK--------------LLVQ--------FQHKNLIRVLGWNNS---------------------------R 307 (508)
Q Consensus 277 ~~~~~~~~E~~--------------~l~~--------l~h~niv~~~~~~~~---------------------------~ 307 (508)
...+.+-+|.. ..+. -+|||||++.++|.+ +
T Consensus 236 ~iL~sM~~ElvPa~~~a~~~e~~~~t~R~l~nqtvhLa~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~ 315 (598)
T KOG4158|consen 236 HILKSMGNELVPAPNAAKLLEGQMGTFRPLPNQTVHLAKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEP 315 (598)
T ss_pred HHHHHhhhhccCcchhhhhcccccceeeeCCCCCcccCCCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCC
Confidence 22233333321 1111 259999999987654 2
Q ss_pred CeeEEEEeecCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEec--CCC--ceEEeeccCC-
Q 045127 308 RTRAIVTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLT--DNL--EPLISRFKIE- 382 (508)
Q Consensus 308 ~~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~--~~~--~~kl~Dfg~~- 382 (508)
...|+||.-++. +|..++.....+.....-++.|+++|+.|||++ ||.|||+|.+|||+. +|+ ...|+|||..
T Consensus 316 ~tlylvMkrY~~-tLr~yl~~~~~s~r~~~~~laQlLEav~hL~~h-gvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcL 393 (598)
T KOG4158|consen 316 KTLYLVMKRYRQ-TLREYLWTRHRSYRTGRVILAQLLEAVTHLHKH-GVAHRDLKSDNILLELDDDEIPQLVVADFGCCL 393 (598)
T ss_pred ceEEEehhcchh-hHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHc-cchhhcccccceEEEecCCCCcEEEEcccceee
Confidence 356899998865 999999988888888999999999999999999 999999999999984 443 4678999762
Q ss_pred --------------------------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHH
Q 045127 383 --------------------------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRM 424 (508)
Q Consensus 383 --------------------------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~ 424 (508)
...-.|+|.|+.|.+.||+++...||....+...+...+-+.
T Consensus 394 Ad~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe~ 473 (598)
T KOG4158|consen 394 ADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQES 473 (598)
T ss_pred eccccccccccccccccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhhh
Confidence 011257899999999999999999998644333333322221
Q ss_pred hccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHH
Q 045127 425 HYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMIT 477 (508)
Q Consensus 425 ~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~ 477 (508)
..+. +.+ .....+.+++...++.||++|++..-..+.|.
T Consensus 474 qLPa-lp~-------------~vpp~~rqlV~~lL~r~pskRvsp~iAANvl~ 512 (598)
T KOG4158|consen 474 QLPA-LPS-------------RVPPVARQLVFDLLKRDPSKRVSPNIAANVLN 512 (598)
T ss_pred hCCC-Ccc-------------cCChHHHHHHHHHhcCCccccCCccHHHhHHH
Confidence 1110 111 11233445667778999999999876665543
|
|
| >KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.3e-18 Score=176.74 Aligned_cols=186 Identities=18% Similarity=0.242 Sum_probs=147.7
Q ss_pred HhhcCCCCccceeeEEecCCeeEEEEeecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCc-cccCCCCCC
Q 045127 289 LVQFQHKNLIRVLGWNNSRRTRAIVTEWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPE-VDYDLRTGS 365 (508)
Q Consensus 289 l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~i-iH~Dlkp~N 365 (508)
|+.+.|.|+.+++|.+.++...++|.+||..|+|.+.+. ...+++.-...++++|+.||+|+|.. .| .|+.++++|
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s-~i~~hg~l~s~n 79 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNS-PIGYHGALKSSN 79 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcC-cceeeeeecccc
Confidence 456889999999999999999999999999999999998 55678888899999999999999999 66 899999999
Q ss_pred EEecCCCceEEeeccCCCC------------------------------------CCCcchhhHHHHHHHHHHhCCCCCc
Q 045127 366 VLLTDNLEPLISRFKIEYQ------------------------------------HRSTKYVYKFGLFLLEMITNRRPLE 409 (508)
Q Consensus 366 Ill~~~~~~kl~Dfg~~~~------------------------------------~~~~~Dv~SlGvil~elltg~~P~~ 409 (508)
.++|....+|++|||+... .+.++||||||++++|+++++.||+
T Consensus 80 Clvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~ 159 (484)
T KOG1023|consen 80 CLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFD 159 (484)
T ss_pred ceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCccc
Confidence 9999999999999987321 3567899999999999999999998
Q ss_pred ccccCcc--cHHHHHHHhccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhh
Q 045127 410 EFERGEA--GFIEYIRMHYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKS 482 (508)
Q Consensus 410 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 482 (508)
....... .+..+++.... ..+.|.+... .+....+..++..||..+|.+||+++.|-..++.+...
T Consensus 160 ~~~~~~~~~eii~~~~~~~~----~~~rP~i~~~---~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~~ 227 (484)
T KOG1023|consen 160 LRNLVEDPDEIILRVKKGGS----NPFRPSIELL---NELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINKG 227 (484)
T ss_pred cccccCChHHHHHHHHhcCC----CCcCcchhhh---hhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhccc
Confidence 7543322 23333333111 1111222111 02233688899999999999999999999998877654
|
|
| >cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain | Back alignment and domain information |
|---|
Probab=99.77 E-value=5.1e-18 Score=157.21 Aligned_cols=146 Identities=16% Similarity=0.159 Sum_probs=113.5
Q ss_pred HHHHhhcCCCCCceeeecCCeEEEEEEECCCCEEEEEEecCCCCH---------------------HHHHHHHHHHHHHh
Q 045127 232 MLKAATNGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSR---------------------EIRDEFVEECKLLV 290 (508)
Q Consensus 232 ~l~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~---------------------~~~~~~~~E~~~l~ 290 (508)
++...-.-|...+.||+|+||.||++..++|+.||||+++..... ........|...+.
T Consensus 9 ~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 88 (198)
T cd05144 9 TLVKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALK 88 (198)
T ss_pred HHHHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHH
Confidence 333333347788999999999999999888999999997643210 01223678899999
Q ss_pred hcCCC--CccceeeEEecCCeeEEEEeecCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEe
Q 045127 291 QFQHK--NLIRVLGWNNSRRTRAIVTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLL 368 (508)
Q Consensus 291 ~l~h~--niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll 368 (508)
.+.|+ .+++.++. ...++||||+++++|...... .....++.+++.++.++|+. |++||||||+||++
T Consensus 89 ~l~~~~i~v~~~~~~----~~~~lv~e~~~g~~L~~~~~~-----~~~~~~~~~i~~~l~~lh~~-gi~H~Dl~p~Nill 158 (198)
T cd05144 89 ALYEEGFPVPKPIDW----NRHAVVMEYIDGVELYRVRVL-----EDPEEVLDEILEEIVKAYKH-GIIHGDLSEFNILV 158 (198)
T ss_pred HHHHcCCCCCceeec----CCceEEEEEeCCcchhhcccc-----ccHHHHHHHHHHHHHHHHHC-CCCcCCCCcccEEE
Confidence 98877 44444442 345899999999999876431 34567889999999999999 99999999999999
Q ss_pred cCCCceEEeeccCCCCCCC
Q 045127 369 TDNLEPLISRFKIEYQHRS 387 (508)
Q Consensus 369 ~~~~~~kl~Dfg~~~~~~~ 387 (508)
++++.++|+|||.+...+.
T Consensus 159 ~~~~~~~liDfg~~~~~~~ 177 (198)
T cd05144 159 DDDEKIYIIDWPQMVSTDH 177 (198)
T ss_pred cCCCcEEEEECCccccCCC
Confidence 9999999999999865543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom |
| >TIGR03724 arch_bud32 Kae1-associated kinase Bud32 | Back alignment and domain information |
|---|
Probab=99.77 E-value=5.4e-18 Score=157.16 Aligned_cols=135 Identities=19% Similarity=0.225 Sum_probs=110.1
Q ss_pred eeeecCCeEEEEEEECCCCEEEEEEecCCCCH-------HHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEeec
Q 045127 245 LVGKNEGAAIYKGILRDGTRVKIEIYKGDVSR-------EIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWT 317 (508)
Q Consensus 245 ~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~-------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 317 (508)
.||+|++|.||+|.+ ++..|++|........ ....++.+|++++..++|+++.....++......++||||+
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 489999999999996 5788999986532211 12366789999999999887766666666666779999999
Q ss_pred CCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCCCCCCc
Q 045127 318 NGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEYQHRST 388 (508)
Q Consensus 318 ~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 388 (508)
+|++|.+++..... .++.+++.+|.++|+. |++|||++|+||+++ ++.++++|||.+......
T Consensus 80 ~g~~l~~~~~~~~~------~~~~~i~~~l~~lH~~-gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~~~~~ 142 (199)
T TIGR03724 80 EGKPLKDVIEEGND------ELLREIGRLVGKLHKA-GIVHGDLTTSNIIVR-DDKLYLIDFGLGKYSDEI 142 (199)
T ss_pred CCccHHHHHhhcHH------HHHHHHHHHHHHHHHC-CeecCCCCcceEEEE-CCcEEEEECCCCcCCCcH
Confidence 99999988753211 7899999999999999 999999999999999 899999999998765443
|
Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine. |
| >PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated | Back alignment and domain information |
|---|
Probab=99.76 E-value=2e-17 Score=176.13 Aligned_cols=146 Identities=16% Similarity=0.148 Sum_probs=117.5
Q ss_pred HhhcCCCCCceeeecCCeEEEEEEECCCCEEEEEEe-cCCCC-H-----HHHHHHHHHHHHHhhcCCCCccceeeEEecC
Q 045127 235 AATNGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIY-KGDVS-R-----EIRDEFVEECKLLVQFQHKNLIRVLGWNNSR 307 (508)
Q Consensus 235 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~-~~~~~-~-----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 307 (508)
.....|...+.||+|+||.||+|.+.+.. +++|+. ..... . ....++.+|+++++.++|++++....++...
T Consensus 330 ~~~~~~~~~~~iG~G~~g~Vy~~~~~~~~-~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~ 408 (535)
T PRK09605 330 EVKRRKIPDHLIGKGAEADIKKGEYLGRD-AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDP 408 (535)
T ss_pred ccccccCccceeccCCcEEEEEEeecCcc-ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeC
Confidence 34455677899999999999999986443 334432 21111 1 1245688999999999999999888887777
Q ss_pred CeeEEEEeecCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCCCCCC
Q 045127 308 RTRAIVTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEYQHRS 387 (508)
Q Consensus 308 ~~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 387 (508)
...++||||+++++|.+++. ....++.|++++|.|||+. +++|||+||+||++ +++.++|+|||+++....
T Consensus 409 ~~~~lv~E~~~g~~L~~~l~-------~~~~~~~~i~~~L~~lH~~-giiHrDlkp~NILl-~~~~~~liDFGla~~~~~ 479 (535)
T PRK09605 409 EEKTIVMEYIGGKDLKDVLE-------GNPELVRKVGEIVAKLHKA-GIVHGDLTTSNFIV-RDDRLYLIDFGLGKYSDL 479 (535)
T ss_pred CCCEEEEEecCCCcHHHHHH-------HHHHHHHHHHHHHHHHHhC-CCccCCCChHHEEE-ECCcEEEEeCcccccCCc
Confidence 77899999999999999874 4578999999999999999 99999999999999 578999999999987655
Q ss_pred cch
Q 045127 388 TKY 390 (508)
Q Consensus 388 ~~D 390 (508)
..|
T Consensus 480 ~~d 482 (535)
T PRK09605 480 IED 482 (535)
T ss_pred hHh
Confidence 444
|
|
| >KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.72 E-value=2e-17 Score=179.32 Aligned_cols=170 Identities=11% Similarity=0.128 Sum_probs=137.6
Q ss_pred HHHHhhcCCCCCceeeecCCeEEEEEEECCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcC---CCCccceeeEEecCC
Q 045127 232 MLKAATNGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQ---HKNLIRVLGWNNSRR 308 (508)
Q Consensus 232 ~l~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~ 308 (508)
+.+...+.|.+.+.||+|+||+||+|...+|+.||+|+-++....+ |.--.+++.+|+ -+-|..+...+...+
T Consensus 692 ~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WE----fYI~~q~~~RLk~~~~~~~~~~~~a~~~~~ 767 (974)
T KOG1166|consen 692 EFEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWE----FYICLQVMERLKPQMLPSIMHISSAHVFQN 767 (974)
T ss_pred eeeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCcee----eeehHHHHHhhchhhhcchHHHHHHHccCC
Confidence 4445556788899999999999999998889999999997765442 222223344443 234555555555667
Q ss_pred eeEEEEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEec-------CCCceEEeecc
Q 045127 309 TRAIVTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLT-------DNLEPLISRFK 380 (508)
Q Consensus 309 ~~~lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~-------~~~~~kl~Dfg 380 (508)
..++|+||.+.|+|.+++. .+.++|..++-++.|++.-++.||.. +||||||||+|.||. +...++|+|||
T Consensus 768 ~S~lv~ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH~~-~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG 846 (974)
T KOG1166|consen 768 ASVLVSEYSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLHAM-GIIHGDIKPDNFLLRREICADSDSKGLYLIDFG 846 (974)
T ss_pred cceeeeeccccccHHHhhccCCCCCchhhhHHHHHHHHHHHHHHhc-ceecccCCcceeEeecccCCCCcccceEEEecc
Confidence 7799999999999999998 67789999999999999999999999 999999999999995 24568999998
Q ss_pred CC-----------------------------CCCCCcchhhHHHHHHHHHHhCCC
Q 045127 381 IE-----------------------------YQHRSTKYVYKFGLFLLEMITNRR 406 (508)
Q Consensus 381 ~~-----------------------------~~~~~~~Dv~SlGvil~elltg~~ 406 (508)
.+ +.++...|-|.++.+++-|+.|+.
T Consensus 847 ~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 847 RSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred cceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence 63 567788999999999999999874
|
|
| >PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A | Back alignment and domain information |
|---|
Probab=99.71 E-value=4.9e-17 Score=155.70 Aligned_cols=204 Identities=12% Similarity=0.134 Sum_probs=131.0
Q ss_pred CCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCC--CHHHHHHHHHHHHHHhhcCC----------CCccceeeEEe--
Q 045127 241 SKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDV--SREIRDEFVEECKLLVQFQH----------KNLIRVLGWNN-- 305 (508)
Q Consensus 241 ~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h----------~niv~~~~~~~-- 305 (508)
...+.||.|+++.||.+.+. +++.+|+|++.-.. .....+++.+|.-....+.+ -.++..++...
T Consensus 15 ~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i~ 94 (288)
T PF14531_consen 15 VRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRIP 94 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEET
T ss_pred EEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEEc
Confidence 45688999999999999984 58999999985322 22346677777755555332 22222222221
Q ss_pred -------cC---C-----eeEEEEeecCCCCHHHHhc-----cC---CCCHHHHHHHHHHHHHHHHHHhhCCCccccCCC
Q 045127 306 -------SR---R-----TRAIVTEWTNGGNVELWLS-----ES---APSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLR 362 (508)
Q Consensus 306 -------~~---~-----~~~lv~e~~~~gsL~~~l~-----~~---~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlk 362 (508)
.. . ..+++|+-+ .++|.+++. .. ......+..+..|+++.+++||+. |++|+|||
T Consensus 95 ~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~-GlVHgdi~ 172 (288)
T PF14531_consen 95 GKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSY-GLVHGDIK 172 (288)
T ss_dssp TS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT-TEEEST-S
T ss_pred CCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhc-ceEecccc
Confidence 11 1 236778877 458988876 11 123444566778999999999999 99999999
Q ss_pred CCCEEecCCCceEEeeccCC--------------------------------CCCCCcchhhHHHHHHHHHHhCCCCCcc
Q 045127 363 TGSVLLTDNLEPLISRFKIE--------------------------------YQHRSTKYVYKFGLFLLEMITNRRPLEE 410 (508)
Q Consensus 363 p~NIll~~~~~~kl~Dfg~~--------------------------------~~~~~~~Dv~SlGvil~elltg~~P~~~ 410 (508)
|+|++++.+|.+.|+||+.. ..++.+.|.|++|+++|.|.+|+.||+.
T Consensus 173 ~~nfll~~~G~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~ 252 (288)
T PF14531_consen 173 PENFLLDQDGGVFLGDFSSLVRAGTRYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFGL 252 (288)
T ss_dssp GGGEEE-TTS-EEE--GGGEEETTEEEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STCC
T ss_pred eeeEEEcCCCCEEEcChHHHeecCceeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCCCC
Confidence 99999999999999999430 1246678999999999999999999985
Q ss_pred cccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCC
Q 045127 411 FERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKL 466 (508)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~R 466 (508)
....... +..+.... +..+.+..++...++.+|.+|
T Consensus 253 ~~~~~~~-----------------~~~f~~C~---~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 253 SSPEADP-----------------EWDFSRCR---DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp CGGGSTS-----------------GGGGTTSS------HHHHHHHHHHT-SSGGGS
T ss_pred CCccccc-----------------cccchhcC---CcCHHHHHHHHHHccCCcccC
Confidence 4322110 00122221 345566778888899999988
|
|
| >PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.68 E-value=7.2e-16 Score=146.55 Aligned_cols=138 Identities=17% Similarity=0.157 Sum_probs=109.4
Q ss_pred Cceee-ecCCeEEEEEEECCCCEEEEEEecCCC------------CHHHHHHHHHHHHHHhhcCCCCc--cceeeEEecC
Q 045127 243 KNLVG-KNEGAAIYKGILRDGTRVKIEIYKGDV------------SREIRDEFVEECKLLVQFQHKNL--IRVLGWNNSR 307 (508)
Q Consensus 243 ~~~lg-~G~~g~V~~~~~~~~~~vavK~~~~~~------------~~~~~~~~~~E~~~l~~l~h~ni--v~~~~~~~~~ 307 (508)
...|| .||.|+||.+... +..++||.+.... ......++.+|++++.+++|+++ ++.+++....
T Consensus 36 ~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred CceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 46788 8999999999885 7788999885321 01234568899999999998775 6677764432
Q ss_pred -C---eeEEEEeecCC-CCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC
Q 045127 308 -R---TRAIVTEWTNG-GNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE 382 (508)
Q Consensus 308 -~---~~~lv~e~~~~-gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~ 382 (508)
. ..++|||++++ .+|.+++....++.. .+.+++.++.+||+. ||+||||||+|||++.++.++++|||.+
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~~~l~~~----~~~~i~~~l~~lH~~-GI~HrDlkp~NILv~~~~~v~LIDfg~~ 189 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQEAPLSEE----QWQAIGQLIARFHDA-GVYHADLNAHNILLDPDGKFWLIDFDRG 189 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhcCCCCHH----HHHHHHHHHHHHHHC-CCCCCCCCchhEEEcCCCCEEEEECCCc
Confidence 2 22599999997 699999876666654 357899999999999 9999999999999999899999999988
Q ss_pred CCCC
Q 045127 383 YQHR 386 (508)
Q Consensus 383 ~~~~ 386 (508)
....
T Consensus 190 ~~~~ 193 (239)
T PRK01723 190 ELRT 193 (239)
T ss_pred ccCC
Confidence 7654
|
|
| >cd05119 RIO RIO kinase family, catalytic domain | Back alignment and domain information |
|---|
Probab=99.68 E-value=4.3e-16 Score=142.86 Aligned_cols=138 Identities=17% Similarity=0.215 Sum_probs=100.2
Q ss_pred CceeeecCCeEEEEEEECCCCEEEEEEecCCCCH-HHHHH----------------------HHHHHHHHhhcCCC--Cc
Q 045127 243 KNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSR-EIRDE----------------------FVEECKLLVQFQHK--NL 297 (508)
Q Consensus 243 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~-~~~~~----------------------~~~E~~~l~~l~h~--ni 297 (508)
.+.||+|+||.||+|...+++.||||+++..... ..... ...|.+.+.++.+. .+
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 4679999999999999888999999998653221 11111 13566666666443 34
Q ss_pred cceeeEEecCCeeEEEEeecCCCCHHH-HhccCCCCHHHHHHHHHHHHHHHHHHhh-CCCccccCCCCCCEEecCCCceE
Q 045127 298 IRVLGWNNSRRTRAIVTEWTNGGNVEL-WLSESAPSWKHRLKVLIGVVEAMCYLQE-QWPEVDYDLRTGSVLLTDNLEPL 375 (508)
Q Consensus 298 v~~~~~~~~~~~~~lv~e~~~~gsL~~-~l~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~iiH~Dlkp~NIll~~~~~~k 375 (508)
.+.++. ...++||||++++++.. .+...... .....++.+++.++.++|. . +++||||||+||+++ ++.++
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~~~-~~~~~~~~~~~~~l~~lh~~~-~ivH~Dl~p~Nili~-~~~~~ 154 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDVRLL-EDPEELYDQILELMRKLYREA-GLVHGDLSEYNILVD-DGKVY 154 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhhhhhhc-ccHHHHHHHHHHHHHHHhhcc-CcCcCCCChhhEEEE-CCcEE
Confidence 445443 23589999999954321 11111111 6678899999999999999 8 999999999999999 99999
Q ss_pred EeeccCCCCCCC
Q 045127 376 ISRFKIEYQHRS 387 (508)
Q Consensus 376 l~Dfg~~~~~~~ 387 (508)
++|||.+.....
T Consensus 155 liDfg~a~~~~~ 166 (187)
T cd05119 155 IIDVPQAVEIDH 166 (187)
T ss_pred EEECcccccccC
Confidence 999999876544
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct |
| >cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Probab=99.67 E-value=6.3e-16 Score=135.80 Aligned_cols=139 Identities=15% Similarity=0.113 Sum_probs=117.3
Q ss_pred CCceeeecCCeEEEEEEECCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCC--CCccceeeEEecCCeeEEEEeecCC
Q 045127 242 KKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQH--KNLIRVLGWNNSRRTRAIVTEWTNG 319 (508)
Q Consensus 242 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~lv~e~~~~ 319 (508)
+.+.||+|.++.||++...+ ..+++|....... ...+.+|+..++.++| .++++++++...++..+++|||+++
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~---~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g 77 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK---GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEG 77 (155)
T ss_pred cceecccccccceEEEEecC-CeEEEEecCCCCc---hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCC
Confidence 45789999999999999854 7899999865433 4678899999999976 5899999988887889999999998
Q ss_pred CCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCC--CccccCCCCCCEEecCCCceEEeeccCCCCCCCcch
Q 045127 320 GNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQW--PEVDYDLRTGSVLLTDNLEPLISRFKIEYQHRSTKY 390 (508)
Q Consensus 320 gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~--~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~D 390 (508)
+.+..+ +......++.+++++++++|... +++|+|++|+||++++.+.+++.|||.+...+...|
T Consensus 78 ~~~~~~------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~~~~~d 144 (155)
T cd05120 78 ETLDEV------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGYGPPAFD 144 (155)
T ss_pred eecccC------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccCCChHHH
Confidence 777654 56677888999999999999852 699999999999999989999999999876665544
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves |
| >TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase | Back alignment and domain information |
|---|
Probab=99.61 E-value=2.6e-14 Score=147.54 Aligned_cols=160 Identities=12% Similarity=0.157 Sum_probs=112.3
Q ss_pred CCCCCceeeecCCeEEEEEEECCCCEEEEEEecCCCCHHHH---------------------------------------
Q 045127 239 GFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIR--------------------------------------- 279 (508)
Q Consensus 239 ~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~--------------------------------------- 279 (508)
.|+ .+.||+|++|.||+|++++|+.||||+.++.......
T Consensus 119 ~fd-~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~E 197 (437)
T TIGR01982 119 EFE-EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRE 197 (437)
T ss_pred hCC-CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHH
Confidence 344 3789999999999999999999999999765322110
Q ss_pred HHHHHHHHHHhhcC-----CCCccceeeEEecCCeeEEEEeecCCCCHHHHhcc--CCCCHHHHHHHHHHHHH-HHHHHh
Q 045127 280 DEFVEECKLLVQFQ-----HKNLIRVLGWNNSRRTRAIVTEWTNGGNVELWLSE--SAPSWKHRLKVLIGVVE-AMCYLQ 351 (508)
Q Consensus 280 ~~~~~E~~~l~~l~-----h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~~i~~-~L~~LH 351 (508)
-+|.+|.+.+.++. ++++.-..-+.......++||||++|++|.++... ... .+.+++.+++. .+..+|
T Consensus 198 ldf~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~---~~~~ia~~~~~~~l~ql~ 274 (437)
T TIGR01982 198 LDLRREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGL---DRKALAENLARSFLNQVL 274 (437)
T ss_pred HCHHHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcCC---CHHHHHHHHHHHHHHHHH
Confidence 12455666666552 33332211122223456899999999999887652 122 23456676666 478899
Q ss_pred hCCCccccCCCCCCEEecCCCceEEeeccCCCCCCCcchhhHHHHHHHHHHhC
Q 045127 352 EQWPEVDYDLRTGSVLLTDNLEPLISRFKIEYQHRSTKYVYKFGLFLLEMITN 404 (508)
Q Consensus 352 ~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~Dv~SlGvil~elltg 404 (508)
.. |++|+|+||.||++++++.++++|||+.+..+. .+.+.+.-++..++.+
T Consensus 275 ~~-g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~-~~r~~l~~l~~a~~~~ 325 (437)
T TIGR01982 275 RD-GFFHADLHPGNIFVLKDGKIIALDFGIVGRLSE-EDRRYLAEILYGFLNR 325 (437)
T ss_pred hC-CceeCCCCcccEEECCCCcEEEEeCCCeeECCH-HHHHHHHHHHHHHHhc
Confidence 99 999999999999999999999999999988764 3555555555555544
|
This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species. |
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.53 E-value=3e-15 Score=152.48 Aligned_cols=164 Identities=16% Similarity=0.157 Sum_probs=137.4
Q ss_pred eeecCCeEEEEEEE----CCCCEEEEEEecCCCCH-HHHHHHHHHHHHHhhcC-CCCccceeeEEecCCeeEEEEeecCC
Q 045127 246 VGKNEGAAIYKGIL----RDGTRVKIEIYKGDVSR-EIRDEFVEECKLLVQFQ-HKNLIRVLGWNNSRRTRAIVTEWTNG 319 (508)
Q Consensus 246 lg~G~~g~V~~~~~----~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~ 319 (508)
+|+|+||.|+.+.- ..|..+|+|+.+..... ..+.....|..++...+ ||.++++...+..+...++++++..+
T Consensus 2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rg 81 (612)
T KOG0603|consen 2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRG 81 (612)
T ss_pred CCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhccc
Confidence 68999999997652 34677888887643221 12235567788888887 99999999999999999999999999
Q ss_pred CCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC---------------
Q 045127 320 GNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY--------------- 383 (508)
Q Consensus 320 gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~--------------- 383 (508)
|.+...+. ...++......+...++-|++++|+. +++|||+|++||+++.+|.+++.|||.++
T Consensus 82 g~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l-~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~cgt~eym 160 (612)
T KOG0603|consen 82 GDLFTRLSKEVMFDELDVAFYLAELALALDHLHKL-GIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIACGTYEYR 160 (612)
T ss_pred chhhhccccCCchHHHHHHHHHHHHHHHHhhcchh-HHHHhcccccceeecccCccccCCchhhhHhHhhhhcccchhhh
Confidence 99998887 55567777777888899999999999 99999999999999999999999998742
Q ss_pred ------CCCCcchhhHHHHHHHHHHhCCCCCcc
Q 045127 384 ------QHRSTKYVYKFGLFLLEMITNRRPLEE 410 (508)
Q Consensus 384 ------~~~~~~Dv~SlGvil~elltg~~P~~~ 410 (508)
.....+|.||||++++||+||..||..
T Consensus 161 ApEI~~gh~~a~D~ws~gvl~felltg~~pf~~ 193 (612)
T KOG0603|consen 161 APEIINGHLSAADWWSFGVLAFELLTGTLPFGG 193 (612)
T ss_pred hhHhhhccCCcccchhhhhhHHHHhhCCCCCch
Confidence 245678999999999999999999975
|
|
| >PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed | Back alignment and domain information |
|---|
Probab=99.47 E-value=8.9e-13 Score=137.78 Aligned_cols=162 Identities=14% Similarity=0.119 Sum_probs=104.9
Q ss_pred hcCCCCCceeeecCCeEEEEEEECC-CCEEEEEEecCCCCHH---------------------------------HHH--
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGILRD-GTRVKIEIYKGDVSRE---------------------------------IRD-- 280 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~---------------------------------~~~-- 280 (508)
..+|+. +.||+|++|.||+|++++ |+.||||+.++..... ..+
T Consensus 119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l 197 (537)
T PRK04750 119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTL 197 (537)
T ss_pred HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHH
Confidence 345776 789999999999999977 9999999997653111 011
Q ss_pred ----HHHHHHHHHhhcC----CCCccceeeEEec-CCeeEEEEeecCCCCHHHHh--ccCCCCHHHHHHHHHHHHH-HHH
Q 045127 281 ----EFVEECKLLVQFQ----HKNLIRVLGWNNS-RRTRAIVTEWTNGGNVELWL--SESAPSWKHRLKVLIGVVE-AMC 348 (508)
Q Consensus 281 ----~~~~E~~~l~~l~----h~niv~~~~~~~~-~~~~~lv~e~~~~gsL~~~l--~~~~l~~~~~~~i~~~i~~-~L~ 348 (508)
++.+|+..+.+++ +...+.+-.++.+ ....++||||++|+.+.+.- .....+... ++...++ -+.
T Consensus 198 ~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~---la~~~v~~~~~ 274 (537)
T PRK04750 198 HDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKL---LAERGVEVFFT 274 (537)
T ss_pred HHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHH---HHHHHHHHHHH
Confidence 2444555554442 3333333333322 34568999999999998753 223332222 2222111 123
Q ss_pred HHhhCCCccccCCCCCCEEecCCC----ceEEeeccCCCCCCCcchhhHHHHHHHHHHhC
Q 045127 349 YLQEQWPEVDYDLRTGSVLLTDNL----EPLISRFKIEYQHRSTKYVYKFGLFLLEMITN 404 (508)
Q Consensus 349 ~LH~~~~iiH~Dlkp~NIll~~~~----~~kl~Dfg~~~~~~~~~Dv~SlGvil~elltg 404 (508)
.++.. |++|+|+||.||+++.++ .+++.|||+.+..+ +.|...+.-.+..++.+
T Consensus 275 Qif~~-GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~-~~~r~~l~~~~~a~~~~ 332 (537)
T PRK04750 275 QVFRD-GFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLN-KEDKRYLAENFLAFFNR 332 (537)
T ss_pred HHHhC-CeeeCCCChHHeEEecCCCCCCeEEEEecceEEECC-HHHHHHHHHHHHHHHhc
Confidence 34567 999999999999999888 99999999998885 44556665555555543
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.45 E-value=6.1e-14 Score=149.94 Aligned_cols=180 Identities=17% Similarity=0.159 Sum_probs=117.4
Q ss_pred hhcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEE
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVT 314 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 314 (508)
...+|+.++.|..|+||.||.++++ ..+++|+|+-++.... +- ++.....|.+|
T Consensus 81 ~e~df~~IklisngAygavylvrh~~trqrfa~kiNkq~lil-------Rn--ilt~a~npfvv---------------- 135 (1205)
T KOG0606|consen 81 SESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKINKQNLIL-------RN--ILTFAGNPFVV---------------- 135 (1205)
T ss_pred CccccceeEeeccCCCCceeeeeccccccchhhcccccchhh-------hc--cccccCCccee----------------
Confidence 3468999999999999999999985 4678888544322111 00 22222233322
Q ss_pred eecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC-----------
Q 045127 315 EWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE----------- 382 (508)
Q Consensus 315 e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~----------- 382 (508)
|+-...++ -+.++.. ++.+++|+|+. ||+|||+||+|.+|+.-|.+|+.|||++
T Consensus 136 -----gDc~tllk~~g~lPvd--------mvla~Eylh~y-givhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl 201 (1205)
T KOG0606|consen 136 -----GDCATLLKNIGPLPVD--------MVLAVEYLHSY-GIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNL 201 (1205)
T ss_pred -----chhhhhcccCCCCcch--------hhHHhHhhccC-CeecCCCCCCcceeeecccccccchhhhhhhhhhccchh
Confidence 34444444 2233322 27889999999 9999999999999999999999999762
Q ss_pred -------------------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhh
Q 045127 383 -------------------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQ 431 (508)
Q Consensus 383 -------------------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~ 431 (508)
..|...+|.|++|+|+||.+.|+.||+....++. +..
T Consensus 202 ~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeel-fg~----------- 269 (1205)
T KOG0606|consen 202 KEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEEL-FGQ----------- 269 (1205)
T ss_pred hhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHH-Hhh-----------
Confidence 2456789999999999999999999986432221 111
Q ss_pred hhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCC
Q 045127 432 LVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLP 467 (508)
Q Consensus 432 ~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP 467 (508)
++...+...+.......+..+++.+.++.+|..|-
T Consensus 270 -visd~i~wpE~dea~p~Ea~dli~~LL~qnp~~Rl 304 (1205)
T KOG0606|consen 270 -VISDDIEWPEEDEALPPEAQDLIEQLLRQNPLCRL 304 (1205)
T ss_pred -hhhhhccccccCcCCCHHHHHHHHHHHHhChHhhc
Confidence 11111111111122234455566666778888883
|
|
| >KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.45 E-value=5.8e-15 Score=126.71 Aligned_cols=132 Identities=22% Similarity=0.320 Sum_probs=115.5
Q ss_pred CcchhcccccccccccccCCCCCcccCCCccccCCCCCcCeEeCccCcccccCCccc------cEEEcccCcccCCCChh
Q 045127 39 DLNEIFKSTIVASHLCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCPLGI------MSIDLSNNSLKGAFPID 112 (508)
Q Consensus 39 ~l~~~~~~~~~~~~l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~l------~~L~Ls~N~l~~~~p~~ 112 (508)
++++.+... .+..|.++.|.++.+|+ .+..|.+|+.|++++|+|.. +|.++ +.|+++-|++. .+|..
T Consensus 25 ~~~gLf~~s----~ITrLtLSHNKl~~vpp-nia~l~nlevln~~nnqie~-lp~~issl~klr~lnvgmnrl~-~lprg 97 (264)
T KOG0617|consen 25 ELPGLFNMS----NITRLTLSHNKLTVVPP-NIAELKNLEVLNLSNNQIEE-LPTSISSLPKLRILNVGMNRLN-ILPRG 97 (264)
T ss_pred hcccccchh----hhhhhhcccCceeecCC-cHHHhhhhhhhhcccchhhh-cChhhhhchhhhheecchhhhh-cCccc
Confidence 666666654 55667778899999999 99999999999999999976 66444 89999999998 88999
Q ss_pred hhccCCccccccccccccC-cCCchhhhcCCccceeccccccccCccccccccccccCCCCccCCCCC
Q 045127 113 VLLCTQIQALDLSYNQLSG-DIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLHSGLF 179 (508)
Q Consensus 113 ~~~l~~L~~L~l~~N~l~g-~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~~~n~~~ 179 (508)
|+.++.|+.|||++|+++. .+| +.|..|+.|+.|+|++|.|.- .|++.+.++++..+++..|..+
T Consensus 98 fgs~p~levldltynnl~e~~lp-gnff~m~tlralyl~dndfe~-lp~dvg~lt~lqil~lrdndll 163 (264)
T KOG0617|consen 98 FGSFPALEVLDLTYNNLNENSLP-GNFFYMTTLRALYLGDNDFEI-LPPDVGKLTNLQILSLRDNDLL 163 (264)
T ss_pred cCCCchhhhhhccccccccccCC-cchhHHHHHHHHHhcCCCccc-CChhhhhhcceeEEeeccCchh
Confidence 9999999999999999974 688 888889999999999999998 8899999999999999998765
|
|
| >cd05151 ChoK Choline Kinase (ChoK) | Back alignment and domain information |
|---|
Probab=99.43 E-value=5.1e-13 Score=120.28 Aligned_cols=141 Identities=12% Similarity=0.082 Sum_probs=104.6
Q ss_pred CceeeecCCeEEEEEEECCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCc-cceeeEEecCCeeEEEEeecCCCC
Q 045127 243 KNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNL-IRVLGWNNSRRTRAIVTEWTNGGN 321 (508)
Q Consensus 243 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~e~~~~gs 321 (508)
.+.++.|.++.||++... +..+++|....... ....+.+|+..++.+.+.++ .+++.+.. ...++||||++|.+
T Consensus 3 ~~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~~~lv~e~i~G~~ 77 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE--LLINRENEAENSKLAAEAGIGPKLYYFDP--ETGVLITEFIEGSE 77 (170)
T ss_pred eeecCCcccCceEEEEEC-CeEEEEEeCCCCcc--cccCHHHHHHHHHHHHHhCCCCceEEEeC--CCCeEEEEecCCCc
Confidence 367899999999999875 77899999854432 12346789999998865554 44554432 34589999999988
Q ss_pred HHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCc-----cccCCCCCCEEecCCCceEEeeccCCCCCCCcchhhHHHH
Q 045127 322 VELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPE-----VDYDLRTGSVLLTDNLEPLISRFKIEYQHRSTKYVYKFGL 396 (508)
Q Consensus 322 L~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~i-----iH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~Dv~SlGv 396 (508)
+.... .....++.+++++|+.||+. ++ +|||++|.||+++ ++.++++||+.+....+..| +|.
T Consensus 78 l~~~~-------~~~~~~~~~l~~~l~~LH~~-~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~~~~~~D---la~ 145 (170)
T cd05151 78 LLTED-------FSDPENLEKIAKLLKKLHSS-PLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGMNDPLFD---LAN 145 (170)
T ss_pred ccccc-------ccCHHHHHHHHHHHHHHhCC-CCCCceeecCCCCcCcEEEE-CCeEEEEecccccCCChHHH---HHH
Confidence 76430 11234568999999999998 75 9999999999999 67899999999887665555 455
Q ss_pred HHHH
Q 045127 397 FLLE 400 (508)
Q Consensus 397 il~e 400 (508)
++.+
T Consensus 146 ~~~~ 149 (170)
T cd05151 146 FFSE 149 (170)
T ss_pred HHHh
Confidence 5543
|
The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph |
| >KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.43 E-value=8.8e-15 Score=125.62 Aligned_cols=169 Identities=19% Similarity=0.205 Sum_probs=128.3
Q ss_pred cccccCCCCCCCCCCcCCcCCCCCccccccCCCCC--CcchhcccccccccccccCCCCCcccCCCccccCCCCCcCeEe
Q 045127 4 EDLNNLHPPPDFNSTIMNNCIHNPSLKYCNSSSPM--DLNEIFKSTIVASHLCNESKNPNCVESFPKIDLRSRPKITPLY 81 (508)
Q Consensus 4 ~~l~~l~~~~~~~~~~~~~c~~~~~~~~~~~~~~~--~l~~~~~~~~~~~~l~~L~~~~n~~~~~p~~~~~~l~~L~~L~ 81 (508)
+.+..|.+++|....+|+.......+..++..++. ++|..++. .. .+..|+...|.+..+|. .|++++.|+.||
T Consensus 33 s~ITrLtLSHNKl~~vppnia~l~nlevln~~nnqie~lp~~iss-l~--klr~lnvgmnrl~~lpr-gfgs~p~levld 108 (264)
T KOG0617|consen 33 SNITRLTLSHNKLTVVPPNIAELKNLEVLNLSNNQIEELPTSISS-LP--KLRILNVGMNRLNILPR-GFGSFPALEVLD 108 (264)
T ss_pred hhhhhhhcccCceeecCCcHHHhhhhhhhhcccchhhhcChhhhh-ch--hhhheecchhhhhcCcc-ccCCCchhhhhh
Confidence 34566778888888888887665556665533332 55543321 11 23344455577888998 999999999999
Q ss_pred CccCccc-ccCCccc------cEEEcccCcccCCCChhhhccCCccccccccccccCcCCchhhhcCCccceeccccccc
Q 045127 82 LSFNFFW-KYCPLGI------MSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHF 154 (508)
Q Consensus 82 L~~N~l~-~~~p~~l------~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp~~~~~~l~~L~~l~l~~N~l 154 (508)
|++|++. ..+|+.| +-|+|+.|.+. .+|..++.|++|+.|.+..|.+- ++| ..++.++.|+.|++.+|++
T Consensus 109 ltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lp-keig~lt~lrelhiqgnrl 185 (264)
T KOG0617|consen 109 LTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLP-KEIGDLTRLRELHIQGNRL 185 (264)
T ss_pred ccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCc-HHHHHHHHHHHHhccccee
Confidence 9999987 4578766 77999999998 88999999999999999999999 999 8899999999999999999
Q ss_pred cCcccccccccccc---CCCCccCCCCCC
Q 045127 155 SEMKVSDTKFFQRF---NSSSFLHSGLFP 180 (508)
Q Consensus 155 ~~~~~~~~~~l~~l---~~~~~~~n~~~~ 180 (508)
+- .||..+++... ....+..|+|.+
T Consensus 186 ~v-lppel~~l~l~~~k~v~r~E~NPwv~ 213 (264)
T KOG0617|consen 186 TV-LPPELANLDLVGNKQVMRMEENPWVN 213 (264)
T ss_pred ee-cChhhhhhhhhhhHHHHhhhhCCCCC
Confidence 98 77777655433 344567788753
|
|
| >KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.42 E-value=4e-14 Score=142.25 Aligned_cols=171 Identities=21% Similarity=0.266 Sum_probs=110.0
Q ss_pred cccccCCCCCCCCCCcCCcCCCC-CccccccCCCCC--CcchhcccccccccccccCCCCCcccCCCccccCCCCCcCeE
Q 045127 4 EDLNNLHPPPDFNSTIMNNCIHN-PSLKYCNSSSPM--DLNEIFKSTIVASHLCNESKNPNCVESFPKIDLRSRPKITPL 80 (508)
Q Consensus 4 ~~l~~l~~~~~~~~~~~~~c~~~-~~~~~~~~~~~~--~l~~~~~~~~~~~~l~~L~~~~n~~~~~p~~~~~~l~~L~~L 80 (508)
..|+.||+++|....+|.+|+.. ..+++++...+- ++....+.++. .|..|.++.|.++++|...|.+|++|+.|
T Consensus 149 ~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~ln--sL~tlkLsrNrittLp~r~Fk~L~~L~~L 226 (873)
T KOG4194|consen 149 PALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLN--SLLTLKLSRNRITTLPQRSFKRLPKLESL 226 (873)
T ss_pred hhhhhhhhhhchhhcccCCCCCCCCCceEEeeccccccccccccccccc--hheeeecccCcccccCHHHhhhcchhhhh
Confidence 35678899999999999999887 567777644332 44433322222 56677788899999998899999999999
Q ss_pred eCccCccccc-------CC-----------------------ccccEEEcccCcccCCCChhhhccCCcccccccccccc
Q 045127 81 YLSFNFFWKY-------CP-----------------------LGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLS 130 (508)
Q Consensus 81 ~L~~N~l~~~-------~p-----------------------~~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 130 (508)
+|..|+|.-. +| ..+++|+|+.|+++..-.+++.+|+.|+.|+||+|.|.
T Consensus 227 dLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~ 306 (873)
T KOG4194|consen 227 DLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQ 306 (873)
T ss_pred hccccceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhh
Confidence 9999997621 22 01155666666666555555556666666666666665
Q ss_pred CcCCchhhhcCCccceeccccccccCccccccccccccCCCCccCCC
Q 045127 131 GDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLHSG 177 (508)
Q Consensus 131 g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~~~n~ 177 (508)
.|..+.+.-..+|+.|+|++|+|+.+.+..+..+..|..+.+.+|.
T Consensus 307 -rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Ns 352 (873)
T KOG4194|consen 307 -RIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNS 352 (873)
T ss_pred -eeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccc
Confidence 4433555555556666666666665445555555555555555553
|
|
| >KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.38 E-value=2.8e-14 Score=144.15 Aligned_cols=168 Identities=20% Similarity=0.169 Sum_probs=105.7
Q ss_pred ccccccCCCCCCCCCCcCCcCCCCCccccccCCCCC--CcchhcccccccccccccCCCCCcccCCCccccCCCCCcCeE
Q 045127 3 VEDLNNLHPPPDFNSTIMNNCIHNPSLKYCNSSSPM--DLNEIFKSTIVASHLCNESKNPNCVESFPKIDLRSRPKITPL 80 (508)
Q Consensus 3 ~~~l~~l~~~~~~~~~~~~~c~~~~~~~~~~~~~~~--~l~~~~~~~~~~~~l~~L~~~~n~~~~~p~~~~~~l~~L~~L 80 (508)
+++|..||+++|-...+|..-..+.....++.+.+. .||+.....+. .|+.|++++|.+.++|+ .+..|.+|++|
T Consensus 102 l~dLt~lDLShNqL~EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLt--DLLfLDLS~NrLe~LPP-Q~RRL~~LqtL 178 (1255)
T KOG0444|consen 102 LKDLTILDLSHNQLREVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLT--DLLFLDLSNNRLEMLPP-QIRRLSMLQTL 178 (1255)
T ss_pred cccceeeecchhhhhhcchhhhhhcCcEEEEcccCccccCCchHHHhhH--hHhhhccccchhhhcCH-HHHHHhhhhhh
Confidence 356777777777777777766666666666533333 44443322211 44556666677888887 78888888888
Q ss_pred eCccCccc----cc---------------------CCccc------cEEEcccCcccCCCChhhhccCCccccccccccc
Q 045127 81 YLSFNFFW----KY---------------------CPLGI------MSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQL 129 (508)
Q Consensus 81 ~L~~N~l~----~~---------------------~p~~l------~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l 129 (508)
.|++|.+. .. +|.++ ..+|||.|.+. ..|..+-++.+|+.|+||+|+|
T Consensus 179 ~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~i 257 (1255)
T KOG0444|consen 179 KLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKI 257 (1255)
T ss_pred hcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-cchHHHhhhhhhheeccCcCce
Confidence 88888654 11 23322 56777777776 6677777777777777777777
Q ss_pred cCcCCchhhhcCCccceeccccccccCccccccccccccCCCCccCCC
Q 045127 130 SGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLHSG 177 (508)
Q Consensus 130 ~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~~~n~ 177 (508)
+ .+. -..+...+|++|++|.|+|+. .|.....+++|+.++..+|.
T Consensus 258 t-eL~-~~~~~W~~lEtLNlSrNQLt~-LP~avcKL~kL~kLy~n~Nk 302 (1255)
T KOG0444|consen 258 T-ELN-MTEGEWENLETLNLSRNQLTV-LPDAVCKLTKLTKLYANNNK 302 (1255)
T ss_pred e-eee-ccHHHHhhhhhhccccchhcc-chHHHhhhHHHHHHHhccCc
Confidence 6 555 444555666666666666666 55556666666555554443
|
|
| >PLN03150 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=5.6e-13 Score=143.80 Aligned_cols=69 Identities=30% Similarity=0.433 Sum_probs=34.1
Q ss_pred CCCccccCCCCCcCeEeCccCcccccCCcc------ccEEEcccCcccCCCChhhhccCCccccccccccccCcCC
Q 045127 65 SFPKIDLRSRPKITPLYLSFNFFWKYCPLG------IMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIP 134 (508)
Q Consensus 65 ~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~------l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp 134 (508)
.+|. +++.|++|+.|+|++|+|+|.+|.. |+.|+|++|+++|.+|..+++|++|+.|+|++|+++|.+|
T Consensus 433 ~ip~-~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N~l~g~iP 507 (623)
T PLN03150 433 FIPN-DISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVP 507 (623)
T ss_pred cCCH-HHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCCcccccCC
Confidence 3444 4555555555555555555544422 2444555555554445444555555555555555554444
|
|
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=7.5e-13 Score=151.60 Aligned_cols=107 Identities=29% Similarity=0.332 Sum_probs=50.8
Q ss_pred ccCCCCCcCeEeCccCcccccCCcc------ccEEEcccCcccCCCChhhhccCCccccccccccccCcCCchhhhcCCc
Q 045127 70 DLRSRPKITPLYLSFNFFWKYCPLG------IMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLAN 143 (508)
Q Consensus 70 ~~~~l~~L~~L~L~~N~l~~~~p~~------l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp~~~~~~l~~ 143 (508)
.|+++++|++|+|++|++++.+|.. +++|+|++|++++.+|..|+++++|++|+|++|+++|.+| ..++++++
T Consensus 183 ~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p-~~l~~l~~ 261 (968)
T PLN00113 183 SLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIP-SSLGNLKN 261 (968)
T ss_pred hhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccC-hhHhCCCC
Confidence 4444444444444444444444422 2444444444444444445555555555555555544444 44455555
Q ss_pred cceeccccccccCccccccccccccCCCCccCCC
Q 045127 144 LTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLHSG 177 (508)
Q Consensus 144 L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~~~n~ 177 (508)
|+.|++++|++++..+..+..+++|..+++.+|.
T Consensus 262 L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~ 295 (968)
T PLN00113 262 LQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNS 295 (968)
T ss_pred CCEEECcCCeeeccCchhHhhccCcCEEECcCCe
Confidence 5555555555554333344444555555555443
|
|
| >cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain | Back alignment and domain information |
|---|
Probab=99.34 E-value=1.3e-11 Score=112.51 Aligned_cols=137 Identities=14% Similarity=0.095 Sum_probs=100.6
Q ss_pred ceeeecCCeEEEEEEECC-------CCEEEEEEecCCCC---------------------HHHHHH----HHHHHHHHhh
Q 045127 244 NLVGKNEGAAIYKGILRD-------GTRVKIEIYKGDVS---------------------REIRDE----FVEECKLLVQ 291 (508)
Q Consensus 244 ~~lg~G~~g~V~~~~~~~-------~~~vavK~~~~~~~---------------------~~~~~~----~~~E~~~l~~ 291 (508)
..||.|.-+.||.|...+ +..+|||+.+.... ....+. ..+|++.|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 568999999999998643 47999999852210 001222 2489999999
Q ss_pred cC--CCCccceeeEEecCCeeEEEEeecCCCCHH-HHhccCCCCHHHHHHHHHHHHHHHHHH-hhCCCccccCCCCCCEE
Q 045127 292 FQ--HKNLIRVLGWNNSRRTRAIVTEWTNGGNVE-LWLSESAPSWKHRLKVLIGVVEAMCYL-QEQWPEVDYDLRTGSVL 367 (508)
Q Consensus 292 l~--h~niv~~~~~~~~~~~~~lv~e~~~~gsL~-~~l~~~~l~~~~~~~i~~~i~~~L~~L-H~~~~iiH~Dlkp~NIl 367 (508)
+. .-++++++++ ..-++||||+.++.+. ..++...++..+...+..+++.++..| |+. |++|||+++.||+
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd~~~~~~~~~~i~~~i~~~l~~l~H~~-glVHGDLs~~NIL 157 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKDAKLNDEEMKNAYYQVLSMMKQLYKEC-NLVHADLSEYNML 157 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhccccCHHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEE
Confidence 85 3566677765 3458999999765332 223334455566778889999999999 788 9999999999999
Q ss_pred ecCCCceEEeeccCCCCCC
Q 045127 368 LTDNLEPLISRFKIEYQHR 386 (508)
Q Consensus 368 l~~~~~~kl~Dfg~~~~~~ 386 (508)
++ ++.+.++|||.+-..+
T Consensus 158 ~~-~~~v~iIDF~qav~~~ 175 (197)
T cd05146 158 WH-DGKVWFIDVSQSVEPT 175 (197)
T ss_pred EE-CCcEEEEECCCceeCC
Confidence 97 5789999999875444
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown. |
| >COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.33 E-value=2.5e-11 Score=106.92 Aligned_cols=132 Identities=19% Similarity=0.192 Sum_probs=103.8
Q ss_pred ceeeecCCeEEEEEEECCCCEEEEEEecCCC-C-HH-----HHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEee
Q 045127 244 NLVGKNEGAAIYKGILRDGTRVKIEIYKGDV-S-RE-----IRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEW 316 (508)
Q Consensus 244 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~-~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 316 (508)
..+++|+-+.+|.+.+. |.++++|.-.+.. . ++ ...+..+|++++.+++--.|....-+..++....|+|||
T Consensus 2 ~~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~ 80 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEY 80 (204)
T ss_pred chhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEE
Confidence 45789999999999875 4446666542221 1 11 145678899999999876777767777788888999999
Q ss_pred cCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCCC
Q 045127 317 TNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEYQ 384 (508)
Q Consensus 317 ~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~ 384 (508)
++|..|.+.+... ...++..+-.-+.-||.. ||+|||+.++||++..+. +.++|||++..
T Consensus 81 I~G~~lkd~l~~~------~~~~~r~vG~~vg~lH~~-givHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 81 IEGELLKDALEEA------RPDLLREVGRLVGKLHKA-GIVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred eCChhHHHHHHhc------chHHHHHHHHHHHHHHhc-CeecCCCccceEEEeCCc-EEEEECCcccc
Confidence 9999999888644 356778888889999999 999999999999998655 99999999863
|
|
| >cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins | Back alignment and domain information |
|---|
Probab=99.33 E-value=9.5e-12 Score=116.99 Aligned_cols=148 Identities=14% Similarity=0.092 Sum_probs=116.8
Q ss_pred ceeeecCCeEEEEEEECCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCC--CCccceeeEEecCC---eeEEEEeecC
Q 045127 244 NLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQH--KNLIRVLGWNNSRR---TRAIVTEWTN 318 (508)
Q Consensus 244 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~---~~~lv~e~~~ 318 (508)
+.|+.|..+.||++...+|+.+++|.............+.+|.++++.+.+ ..+.+++.+..... ..++||||++
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~ 83 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD 83 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence 678999999999999877789999998644322234578899999999975 44677777766542 5689999999
Q ss_pred CCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhC---------------------------------------------
Q 045127 319 GGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQ--------------------------------------------- 353 (508)
Q Consensus 319 ~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~--------------------------------------------- 353 (508)
|.++.+.+....++..+...++.+++++|.+||+.
T Consensus 84 G~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (223)
T cd05154 84 GRVLRDRLLRPELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERLLRW 163 (223)
T ss_pred CEecCCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHHHHH
Confidence 99887765334577788888899999999999852
Q ss_pred ----------CCccccCCCCCCEEecC--CCceEEeeccCCCCCCCcchh
Q 045127 354 ----------WPEVDYDLRTGSVLLTD--NLEPLISRFKIEYQHRSTKYV 391 (508)
Q Consensus 354 ----------~~iiH~Dlkp~NIll~~--~~~~kl~Dfg~~~~~~~~~Dv 391 (508)
..++|+|++|.||+++. ++.+.++||+.+....+..|+
T Consensus 164 ~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~g~~~~Dl 213 (223)
T cd05154 164 LEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATLGDPLADL 213 (223)
T ss_pred HHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEeccccccCChHHHH
Confidence 14689999999999998 667899999998877777665
|
This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain |
| >KOG0472 consensus Leucine-rich repeat protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.33 E-value=8.1e-14 Score=134.41 Aligned_cols=120 Identities=23% Similarity=0.318 Sum_probs=108.7
Q ss_pred cccccCCCCCcccCCCccccCCCCCcCeEeCccCcccccCC-----ccccEEEcccCcccCCCChhhh-ccCCccccccc
Q 045127 52 HLCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCP-----LGIMSIDLSNNSLKGAFPIDVL-LCTQIQALDLS 125 (508)
Q Consensus 52 ~l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p-----~~l~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~l~ 125 (508)
.+..|+.+.|.++++|+ +++.|.+|..|+|..|+|.. +| ..+.+|+++.|+|+ .+|.+.. ++.+|.+|||.
T Consensus 184 ~L~~ld~~~N~L~tlP~-~lg~l~~L~~LyL~~Nki~~-lPef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLR 260 (565)
T KOG0472|consen 184 RLKHLDCNSNLLETLPP-ELGGLESLELLYLRRNKIRF-LPEFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLR 260 (565)
T ss_pred HHHhcccchhhhhcCCh-hhcchhhhHHHHhhhccccc-CCCCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeecc
Confidence 45677888899999999 99999999999999999975 55 22389999999999 8888876 99999999999
Q ss_pred cccccCcCCchhhhcCCccceeccccccccCccccccccccccCCCCccCCCC
Q 045127 126 YNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLHSGL 178 (508)
Q Consensus 126 ~N~l~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~~~n~~ 178 (508)
.|++. ++| +.+.-+.+|+.||+|+|.+++ .++..+++ .+..+.+.|||.
T Consensus 261 dNklk-e~P-de~clLrsL~rLDlSNN~is~-Lp~sLgnl-hL~~L~leGNPl 309 (565)
T KOG0472|consen 261 DNKLK-EVP-DEICLLRSLERLDLSNNDISS-LPYSLGNL-HLKFLALEGNPL 309 (565)
T ss_pred ccccc-cCc-hHHHHhhhhhhhcccCCcccc-CCcccccc-eeeehhhcCCch
Confidence 99999 999 888999999999999999999 88899999 999999999986
|
|
| >KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.32 E-value=3.4e-13 Score=129.95 Aligned_cols=163 Identities=15% Similarity=0.144 Sum_probs=139.1
Q ss_pred CCcCCcCCCCC---ccccccCCCCCCcchhcccccccccccccCCCCCcccCCCccccCCCCCcCeEeCccCcccccCCc
Q 045127 17 STIMNNCIHNP---SLKYCNSSSPMDLNEIFKSTIVASHLCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCPL 93 (508)
Q Consensus 17 ~~~~~~c~~~~---~~~~~~~~~~~~l~~~~~~~~~~~~l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~ 93 (508)
..+|.+|.|.. ..|.|+.....++|.......+...|. .|.|+.||+++|+.+++|+.||||+|+|+..-|+
T Consensus 35 ~~CP~pC~Cs~~~g~~VdCr~~GL~eVP~~LP~~tveirLd-----qN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~ 109 (498)
T KOG4237|consen 35 SACPAPCTCSDVEGGIVDCRGKGLTEVPANLPPETVEIRLD-----QNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPD 109 (498)
T ss_pred ccCCCCcccCCCCCceEEccCCCcccCcccCCCcceEEEec-----cCCcccCChhhccchhhhceecccccchhhcChH
Confidence 46788898887 789999998888888776654444433 3889999999999999999999999999987786
Q ss_pred cc-------cEEEcccCcccCCCChhhhccCCccccccccccccCcCCchhhhcCCccceeccccccccCcccccccccc
Q 045127 94 GI-------MSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQ 166 (508)
Q Consensus 94 ~l-------~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~ 166 (508)
.| +.+++++|+|+...-+.|++|..|+.|.+.-|++. -++.+.|..|++|..|.+-+|.+..+.-.++..+.
T Consensus 110 AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLllNan~i~-Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~ 188 (498)
T KOG4237|consen 110 AFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLLLNANHIN-CIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLA 188 (498)
T ss_pred hhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHhcChhhhc-chhHHHHHHhhhcchhcccchhhhhhccccccchh
Confidence 66 56777889999777788999999999999999999 77779999999999999999999985555788888
Q ss_pred ccCCCCccCCCCC-CCCCCc
Q 045127 167 RFNSSSFLHSGLF-PGHHNY 185 (508)
Q Consensus 167 ~l~~~~~~~n~~~-~c~~~~ 185 (508)
.++.+.+..|++. .|+-.+
T Consensus 189 ~i~tlhlA~np~icdCnL~w 208 (498)
T KOG4237|consen 189 AIKTLHLAQNPFICDCNLPW 208 (498)
T ss_pred ccchHhhhcCccccccccch
Confidence 9999999999976 687543
|
|
| >KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.31 E-value=7.3e-13 Score=132.75 Aligned_cols=91 Identities=21% Similarity=0.335 Sum_probs=81.9
Q ss_pred eeEEEEeecCCCCHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccC---
Q 045127 309 TRAIVTEWTNGGNVELWLS----ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKI--- 381 (508)
Q Consensus 309 ~~~lv~e~~~~gsL~~~l~----~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~--- 381 (508)
..||.|++|...+|.+|+. ....++.....++.|++.|++| + +.+|+|+||.||+...+..+||+|||+
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k-~~ihrdlkp~nif~~~d~q~kIgDFgl~ts 405 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---K-GLIHRDLKPSNIFFSDDDQLKIGDFGLVTS 405 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---c-cchhhhccccccccccchhhhhhhhhheee
Confidence 5689999999999999997 3445788889999999999999 7 999999999999999999999999986
Q ss_pred ------------------------------CCCCCCcchhhHHHHHHHHHHh
Q 045127 382 ------------------------------EYQHRSTKYVYKFGLFLLEMIT 403 (508)
Q Consensus 382 ------------------------------~~~~~~~~Dv~SlGvil~ellt 403 (508)
+..|+.++||||||++++|+++
T Consensus 406 ~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~ 457 (516)
T KOG1033|consen 406 QDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLI 457 (516)
T ss_pred cccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHH
Confidence 1356789999999999999997
|
|
| >KOG1243 consensus Protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.29 E-value=4.3e-11 Score=123.50 Aligned_cols=143 Identities=19% Similarity=0.227 Sum_probs=115.3
Q ss_pred CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEeecCCCCHHHHhccCCCCHHHHHHH
Q 045127 260 RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWTNGGNVELWLSESAPSWKHRLKV 339 (508)
Q Consensus 260 ~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i 339 (508)
.++.+|.|...+.... .......+-++.|+.++||+|+++++.++.....|+|+|-+. .|..++++ +......-.
T Consensus 35 ~~~~~vsVF~~~~~~~-~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~--l~~~~v~~G 109 (690)
T KOG1243|consen 35 ADGGPVSVFVYKRSNG-EVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKE--LGKEEVCLG 109 (690)
T ss_pred ccCCceEEEEEeCCCc-hhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHH--hHHHHHHHH
Confidence 4688888888865444 345566778899999999999999999999999999999885 47767652 225566677
Q ss_pred HHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-----------------CCC----C----cchhhHH
Q 045127 340 LIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY-----------------QHR----S----TKYVYKF 394 (508)
Q Consensus 340 ~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~-----------------~~~----~----~~Dv~Sl 394 (508)
++||+.||.|||+.|+++|++|.-+.|++++.|..||++|-... ... . ..|.|-|
T Consensus 110 l~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~~~s~~s~D~~~L 189 (690)
T KOG1243|consen 110 LFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAKSLYLIESFDDPEEIDPSEWSIDSWGL 189 (690)
T ss_pred HHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccccchhhhcccChhhcCccccchhhhhH
Confidence 89999999999988899999999999999999999999993321 011 1 2499999
Q ss_pred HHHHHHHHhCCCC
Q 045127 395 GLFLLEMITNRRP 407 (508)
Q Consensus 395 Gvil~elltg~~P 407 (508)
|++++|++.|..+
T Consensus 190 g~li~el~ng~~~ 202 (690)
T KOG1243|consen 190 GCLIEELFNGSLL 202 (690)
T ss_pred HHHHHHHhCcccC
Confidence 9999999999433
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.29 E-value=2.5e-13 Score=144.71 Aligned_cols=227 Identities=14% Similarity=0.156 Sum_probs=168.9
Q ss_pred hcCCCCCceeeecCCeEEEEEEEC--CCCEEEEEEecCCC-CHHHHHHHHHHHHHHhhcC-CCCccceeeEEecCCeeEE
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGILR--DGTRVKIEIYKGDV-SREIRDEFVEECKLLVQFQ-HKNLIRVLGWNNSRRTRAI 312 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~l 312 (508)
...|...+.||+|+|+.|-..... ....+|+|.+.... ..........|..+-+.+. |+|++.+++.....+..++
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~ 98 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLL 98 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccc
Confidence 445777788999999999887753 24556666665332 2334455666888878886 9999999999999999999
Q ss_pred EEeecCCCCHHHHh-c-cC-CCCHHHHHHHHHHHHHHHHHHh-hCCCccccCCCCCCEEecCCC-ceEEeeccCCCC---
Q 045127 313 VTEWTNGGNVELWL-S-ES-APSWKHRLKVLIGVVEAMCYLQ-EQWPEVDYDLRTGSVLLTDNL-EPLISRFKIEYQ--- 384 (508)
Q Consensus 313 v~e~~~~gsL~~~l-~-~~-~l~~~~~~~i~~~i~~~L~~LH-~~~~iiH~Dlkp~NIll~~~~-~~kl~Dfg~~~~--- 384 (508)
+++|..++++.+.+ . .. ..+....-.+..|+..++.|+| .. ++.|+|+||+|.+++..+ ..+++|||++..
T Consensus 99 ~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~-~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~ 177 (601)
T KOG0590|consen 99 SLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPEN-GVTHRDIKPSNSLLDESGSALKIADFGLATAYRN 177 (601)
T ss_pred ccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCccc-ccccCCCCCccchhccCCCcccCCCchhhccccc
Confidence 99999999999998 5 22 6677788889999999999999 77 999999999999999999 999999976421
Q ss_pred -----------------------------CCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhh
Q 045127 385 -----------------------------HRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVD 435 (508)
Q Consensus 385 -----------------------------~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (508)
..+..|+||.|+++.-+++|..|++...........|...... ......
T Consensus 178 ~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~ 255 (601)
T KOG0590|consen 178 KNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKGR--FTQLPW 255 (601)
T ss_pred cCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeecccccc--cccCcc
Confidence 1245799999999999999999998665444333333322110 000000
Q ss_pred hcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 436 ERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 436 ~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
. .......++..+++..+|+.|.+.+++...
T Consensus 256 ~---------~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d 286 (601)
T KOG0590|consen 256 N---------SISDQAHDLLHKILKENPSNRLSIEELKLD 286 (601)
T ss_pred c---------cCChhhhhcccccccCCchhcccccccccc
Confidence 0 112334456667788999999999887654
|
|
| >KOG3087 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.28 E-value=5.6e-11 Score=104.10 Aligned_cols=150 Identities=16% Similarity=0.171 Sum_probs=111.0
Q ss_pred CCceeeecCCeEEEEEEECCCCEEEEEEe-cCCCC-H-----HHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEE
Q 045127 242 KKNLVGKNEGAAIYKGILRDGTRVKIEIY-KGDVS-R-----EIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVT 314 (508)
Q Consensus 242 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~-~~~~~-~-----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 314 (508)
....+-+|+-+.|+++.+. |+...||.- .+... + -..++..+|++.+.++.--.|.-..-++.+...-.|+|
T Consensus 11 ~l~likQGAEArv~~~~~~-Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFS-GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred cceeeeccceeeEeeeccC-CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence 5688999999999999985 666666653 22111 1 13567889999999987666665555666666678999
Q ss_pred eecCC-CCHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCC---ceEEeeccCCCC---
Q 045127 315 EWTNG-GNVELWLS---ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNL---EPLISRFKIEYQ--- 384 (508)
Q Consensus 315 e~~~~-gsL~~~l~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~---~~kl~Dfg~~~~--- 384 (508)
||++| .++.+++. ......+-...++.+|-+.+.-||.. +|+||||..+||++..++ .+.++|||++..
T Consensus 90 E~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~n-diiHGDLTTSNill~~~~~~~~~~lIdfgls~~s~~ 168 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDN-DIIHGDLTTSNILLRSDGNQITPILIDFGLSSVSRL 168 (229)
T ss_pred EeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhC-CeecccccccceEEecCCCcCceEEEeecchhcccC
Confidence 99977 47777776 22333333468899999999999999 999999999999997554 458999999743
Q ss_pred -CCCcchhhH
Q 045127 385 -HRSTKYVYK 393 (508)
Q Consensus 385 -~~~~~Dv~S 393 (508)
-+..+|+|-
T Consensus 169 ~EDKgVDLYV 178 (229)
T KOG3087|consen 169 PEDKGVDLYV 178 (229)
T ss_pred cccccceeee
Confidence 234567663
|
|
| >KOG1266 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.24 E-value=1.3e-11 Score=116.72 Aligned_cols=170 Identities=19% Similarity=0.233 Sum_probs=121.4
Q ss_pred HHHhhcCCCCccceeeEEecC-----CeeEEEEeecCCCCHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHhhCC-C
Q 045127 287 KLLVQFQHKNLIRVLGWNNSR-----RTRAIVTEWTNGGNVELWLS-----ESAPSWKHRLKVLIGVVEAMCYLQEQW-P 355 (508)
Q Consensus 287 ~~l~~l~h~niv~~~~~~~~~-----~~~~lv~e~~~~gsL~~~l~-----~~~l~~~~~~~i~~~i~~~L~~LH~~~-~ 355 (508)
.-+-++.|.|+|+++.|+.+. ....+++|||..|++..+++ ...+......+|+.||..||.|||+.. .
T Consensus 119 dnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~Pp 198 (458)
T KOG1266|consen 119 DNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPP 198 (458)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCc
Confidence 445556799999999988653 35688999999999999998 456777788899999999999999976 8
Q ss_pred ccccCCCCCCEEecCCCceEEeec-------------------------------cCCCCCCCcchhhHHHHHHHHHHhC
Q 045127 356 EVDYDLRTGSVLLTDNLEPLISRF-------------------------------KIEYQHRSTKYVYKFGLFLLEMITN 404 (508)
Q Consensus 356 iiH~Dlkp~NIll~~~~~~kl~Df-------------------------------g~~~~~~~~~Dv~SlGvil~elltg 404 (508)
|+|+++..+-|++..++-+|++-- |.....+.++|||+||+..+||..+
T Consensus 199 iihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemail 278 (458)
T KOG1266|consen 199 IIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAIL 278 (458)
T ss_pred cccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHh
Confidence 899999999999999998888632 1223345678999999999999887
Q ss_pred CCC-CcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 405 RRP-LEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 405 ~~P-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
..- ....+.-. .... +...+...++. .=...+..|++.+|..||+|.+++..
T Consensus 279 Eiq~tnseS~~~------~ee~--------ia~~i~~len~-----lqr~~i~kcl~~eP~~rp~ar~llfH 331 (458)
T KOG1266|consen 279 EIQSTNSESKVE------VEEN--------IANVIIGLENG-----LQRGSITKCLEGEPNGRPDARLLLFH 331 (458)
T ss_pred eeccCCCcceee------hhhh--------hhhheeeccCc-----cccCcCcccccCCCCCCcchhhhhcC
Confidence 653 21111100 0000 00011011110 00135568999999999999988753
|
|
| >KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.20 E-value=1.3e-11 Score=124.42 Aligned_cols=158 Identities=18% Similarity=0.190 Sum_probs=86.5
Q ss_pred CCcCCcCCCCCccccccCCCCCCcchhcccccccccccccCCCCCcccCCCccccCCCCCcCeEeCccCcccccCC----
Q 045127 17 STIMNNCIHNPSLKYCNSSSPMDLNEIFKSTIVASHLCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCP---- 92 (508)
Q Consensus 17 ~~~~~~c~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p---- 92 (508)
..+|..|.|...+..|+....-.+....-....+.+...|+.++|.+..+....|.++++|+.++|.+|.++. +|
T Consensus 44 ~~cpa~c~c~~~lldcs~~~lea~~~~~l~g~lp~~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt~-IP~f~~ 122 (873)
T KOG4194|consen 44 SECPATCPCNTRLLDCSDRELEAIDKSRLKGFLPSQTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELTR-IPRFGH 122 (873)
T ss_pred ccCCCcCCCCceeeecCccccccccccccCCcCccceeeeeccccccccCcHHHHhcCCcceeeeeccchhhh-cccccc
Confidence 3678889998888888866444332222222333333334444455555555455666666666666666553 33
Q ss_pred --ccc------------------------cEEEcccCcccCCCChhhhccCCccccccccccccCcCCchhhhcCCccce
Q 045127 93 --LGI------------------------MSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTF 146 (508)
Q Consensus 93 --~~l------------------------~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp~~~~~~l~~L~~ 146 (508)
+.+ +.||||.|.|+.+.-.+|..-.++++|+|++|.|+ .+-.+.|.++.+|.+
T Consensus 123 ~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It-~l~~~~F~~lnsL~t 201 (873)
T KOG4194|consen 123 ESGHLEKLDLRHNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRIT-TLETGHFDSLNSLLT 201 (873)
T ss_pred cccceeEEeeeccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeecccccc-ccccccccccchhee
Confidence 113 45555555555333344444455555555555555 444455666666666
Q ss_pred eccccccccCccccccccccccCCCCccCC
Q 045127 147 LNLSYNHFSEMKVSDTKFFQRFNSSSFLHS 176 (508)
Q Consensus 147 l~l~~N~l~~~~~~~~~~l~~l~~~~~~~n 176 (508)
|.|+.|+++.+++-.|+.+++|..+.+..|
T Consensus 202 lkLsrNrittLp~r~Fk~L~~L~~LdLnrN 231 (873)
T KOG4194|consen 202 LKLSRNRITTLPQRSFKRLPKLESLDLNRN 231 (873)
T ss_pred eecccCcccccCHHHhhhcchhhhhhcccc
Confidence 666666666655555555666655555554
|
|
| >KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.19 E-value=2.4e-12 Score=130.49 Aligned_cols=123 Identities=25% Similarity=0.337 Sum_probs=104.4
Q ss_pred cccccCCCCCcccCCCccccCCCCCcCeEeCccCccc-ccCCccc------cEEEcccCcccCCCChhhhccCCcccccc
Q 045127 52 HLCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFW-KYCPLGI------MSIDLSNNSLKGAFPIDVLLCTQIQALDL 124 (508)
Q Consensus 52 ~l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~-~~~p~~l------~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 124 (508)
.|..|+.+.|++.++-. +++.|+.|+.+++..|++. ..+|+.+ ..||||+|+++ ..|..+..-+++-.|+|
T Consensus 56 kLEHLs~~HN~L~~vhG-ELs~Lp~LRsv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNL 133 (1255)
T KOG0444|consen 56 KLEHLSMAHNQLISVHG-ELSDLPRLRSVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNL 133 (1255)
T ss_pred hhhhhhhhhhhhHhhhh-hhccchhhHHHhhhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEc
Confidence 35567778888888886 8999999999999999886 2366544 89999999998 77999999999999999
Q ss_pred ccccccCcCCchhhhcCCccceeccccccccCccccccccccccCCCCccCCCC
Q 045127 125 SYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLHSGL 178 (508)
Q Consensus 125 ~~N~l~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~~~n~~ 178 (508)
|+|+|. +||...|.+|+.|-+||||+|+|.. .||....+.+|..+.+++||.
T Consensus 134 S~N~Ie-tIPn~lfinLtDLLfLDLS~NrLe~-LPPQ~RRL~~LqtL~Ls~NPL 185 (1255)
T KOG0444|consen 134 SYNNIE-TIPNSLFINLTDLLFLDLSNNRLEM-LPPQIRRLSMLQTLKLSNNPL 185 (1255)
T ss_pred ccCccc-cCCchHHHhhHhHhhhccccchhhh-cCHHHHHHhhhhhhhcCCChh
Confidence 999999 9998888899999999999999998 788888888888888888875
|
|
| >PLN03150 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=1.9e-10 Score=124.32 Aligned_cols=103 Identities=32% Similarity=0.380 Sum_probs=88.8
Q ss_pred CcCeEeCccCcccccCCc------cccEEEcccCcccCCCChhhhccCCccccccccccccCcCCchhhhcCCccceecc
Q 045127 76 KITPLYLSFNFFWKYCPL------GIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNL 149 (508)
Q Consensus 76 ~L~~L~L~~N~l~~~~p~------~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp~~~~~~l~~L~~l~l 149 (508)
.++.|+|++|.+.|.+|. .|+.|+|++|+++|.+|..++.+++|+.|+|++|+++|.+| ..++.|++|+.|+|
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP-~~l~~L~~L~~L~L 497 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIP-ESLGQLTSLRILNL 497 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCc-hHHhcCCCCCEEEC
Confidence 467899999999999985 45999999999999999999999999999999999999999 88999999999999
Q ss_pred ccccccCcccccccc-ccccCCCCccCCCCC
Q 045127 150 SYNHFSEMKVSDTKF-FQRFNSSSFLHSGLF 179 (508)
Q Consensus 150 ~~N~l~~~~~~~~~~-l~~l~~~~~~~n~~~ 179 (508)
++|+|+|..|..+.. +.++..+.+.+|+.+
T Consensus 498 s~N~l~g~iP~~l~~~~~~~~~l~~~~N~~l 528 (623)
T PLN03150 498 NGNSLSGRVPAALGGRLLHRASFNFTDNAGL 528 (623)
T ss_pred cCCcccccCChHHhhccccCceEEecCCccc
Confidence 999999955554443 234556777888654
|
|
| >PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=1.7e-09 Score=104.07 Aligned_cols=139 Identities=14% Similarity=0.101 Sum_probs=102.8
Q ss_pred ceeeecCCeEEEEEEECCCCEEEEEEecCCCCHHHHH----------HHHHHHHHHhhcCCCC--ccceeeEEec-----
Q 045127 244 NLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRD----------EFVEECKLLVQFQHKN--LIRVLGWNNS----- 306 (508)
Q Consensus 244 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~----------~~~~E~~~l~~l~h~n--iv~~~~~~~~----- 306 (508)
+.+-......|+++.+ +|+.+.||........+..+ .+.+|...+.++...+ +++++++...
T Consensus 28 e~v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~ 106 (268)
T PRK15123 28 EVFRELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPA 106 (268)
T ss_pred cEEecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCc
Confidence 4555455556777766 57789999875433221112 4789999998885333 3455666543
Q ss_pred CCeeEEEEeecCCC-CHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecC-------CCceE
Q 045127 307 RRTRAIVTEWTNGG-NVELWLS---ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTD-------NLEPL 375 (508)
Q Consensus 307 ~~~~~lv~e~~~~g-sL~~~l~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~-------~~~~k 375 (508)
....++|||++++. +|.+++. ....+...+..++.+++..+.-||.. ||+|+|++++|||++. +..+.
T Consensus 107 ~~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~-Gi~HgDL~~~NiLl~~~~~~~~~~~~~~ 185 (268)
T PRK15123 107 TRTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAA-GINHRDCYICHFLLHLPFPGREEDLKLS 185 (268)
T ss_pred cceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHC-cCccCCCChhhEEEeccccCCCCCceEE
Confidence 23468999999886 8998875 34456677889999999999999999 9999999999999975 46899
Q ss_pred EeeccCCCC
Q 045127 376 ISRFKIEYQ 384 (508)
Q Consensus 376 l~Dfg~~~~ 384 (508)
++||+.+..
T Consensus 186 LIDl~r~~~ 194 (268)
T PRK15123 186 VIDLHRAQI 194 (268)
T ss_pred EEECCcccc
Confidence 999998743
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.11 E-value=7.6e-11 Score=120.54 Aligned_cols=220 Identities=11% Similarity=0.056 Sum_probs=158.3
Q ss_pred CCCCCceeee--cCCeEEEEEEE---CCCCEEEEEEecCCCC-HHHHHHHHHHHHHHhhcC-CCCccceeeEEecCCeeE
Q 045127 239 GFSKKNLVGK--NEGAAIYKGIL---RDGTRVKIEIYKGDVS-REIRDEFVEECKLLVQFQ-HKNLIRVLGWNNSRRTRA 311 (508)
Q Consensus 239 ~~~~~~~lg~--G~~g~V~~~~~---~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~ 311 (508)
.|.....+|. |.+|.||.+.. .++..+|+|.-+.... +.....-.+|+...++++ |++.++.+..+..++..+
T Consensus 115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lf 194 (524)
T KOG0601|consen 115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILF 194 (524)
T ss_pred hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcce
Confidence 4556688899 99999999986 4578899988543322 223344467777777775 999999888999999999
Q ss_pred EEEeecCCCCHHHHhc--cCCCCHHHHHHHHHHHHH----HHHHHhhCCCccccCCCCCCEEecCC-CceEEeeccCC--
Q 045127 312 IVTEWTNGGNVELWLS--ESAPSWKHRLKVLIGVVE----AMCYLQEQWPEVDYDLRTGSVLLTDN-LEPLISRFKIE-- 382 (508)
Q Consensus 312 lv~e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~----~L~~LH~~~~iiH~Dlkp~NIll~~~-~~~kl~Dfg~~-- 382 (508)
+-+|++. .+|..+.. ...++.........+... ||.++|+. +++|-|+||.||++..+ ...+++|||+-
T Consensus 195 iqtE~~~-~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~-~~~~~~~kp~~i~~~~~~~s~~~~df~~v~~ 272 (524)
T KOG0601|consen 195 IQTELCG-ESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSN-NIVHDDLKPANIFTTSDWTSCKLTDFGLVSK 272 (524)
T ss_pred eeecccc-chhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCC-cccccccchhheecccccceeecCCcceeEE
Confidence 9999884 78888887 445777888888888888 99999999 99999999999999988 88999999651
Q ss_pred -----------------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhh
Q 045127 383 -----------------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLV 433 (508)
Q Consensus 383 -----------------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (508)
..++..+|+||+|.+..+..++..+....... .|.. .+...
T Consensus 273 i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~-----~W~~--~r~~~--- 342 (524)
T KOG0601|consen 273 ISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNS-----SWSQ--LRQGY--- 342 (524)
T ss_pred ccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCC-----Cccc--ccccc---
Confidence 23456789999999999999987664321101 1110 00000
Q ss_pred hhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 434 VDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 434 ~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
+..++ ......++......+++.+|-.|++.+++.+.
T Consensus 343 ip~e~-----~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l 379 (524)
T KOG0601|consen 343 IPLEF-----CEGGSSSLRSVTSQMLDEDPRLRLTAQILTAL 379 (524)
T ss_pred Cchhh-----hcCcchhhhhHHHHhcCcchhhhhHHHHHhcc
Confidence 00000 00112223336677899999999998877653
|
|
| >KOG0472 consensus Leucine-rich repeat protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.09 E-value=2.4e-12 Score=124.33 Aligned_cols=169 Identities=20% Similarity=0.197 Sum_probs=109.9
Q ss_pred cccccCCCCCCCCCCcCCcCCCCCccccccCCCCC--CcchhcccccccccccccCCCCCcccCCCccccCCCCCcCeEe
Q 045127 4 EDLNNLHPPPDFNSTIMNNCIHNPSLKYCNSSSPM--DLNEIFKSTIVASHLCNESKNPNCVESFPKIDLRSRPKITPLY 81 (508)
Q Consensus 4 ~~l~~l~~~~~~~~~~~~~c~~~~~~~~~~~~~~~--~l~~~~~~~~~~~~l~~L~~~~n~~~~~p~~~~~~l~~L~~L~ 81 (508)
+++..|+++.|....+|..-....+++.|+-+.+- .+++.+.. -..+.+|...+|++.++|+ ++.++.+|..|+
T Consensus 91 ~~l~~l~vs~n~ls~lp~~i~s~~~l~~l~~s~n~~~el~~~i~~---~~~l~dl~~~~N~i~slp~-~~~~~~~l~~l~ 166 (565)
T KOG0472|consen 91 EALKSLNVSHNKLSELPEQIGSLISLVKLDCSSNELKELPDSIGR---LLDLEDLDATNNQISSLPE-DMVNLSKLSKLD 166 (565)
T ss_pred HHHHHhhcccchHhhccHHHhhhhhhhhhhccccceeecCchHHH---HhhhhhhhccccccccCch-HHHHHHHHHHhh
Confidence 45566778888888888887777777776655433 44443321 1245556666778888887 888888888888
Q ss_pred CccCcccccCCcc-----ccEEEcccCcccCCCChhhhccCCccccccccccccC---------------------cCCc
Q 045127 82 LSFNFFWKYCPLG-----IMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSG---------------------DIPV 135 (508)
Q Consensus 82 L~~N~l~~~~p~~-----l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g---------------------~lp~ 135 (508)
+.+|++....|.. ++.||+..|-++ .+|..++++.+|..|||.+|+|.- .+|.
T Consensus 167 ~~~n~l~~l~~~~i~m~~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL~~Nki~~lPef~gcs~L~Elh~g~N~i~~lpa 245 (565)
T KOG0472|consen 167 LEGNKLKALPENHIAMKRLKHLDCNSNLLE-TLPPELGGLESLELLYLRRNKIRFLPEFPGCSLLKELHVGENQIEMLPA 245 (565)
T ss_pred ccccchhhCCHHHHHHHHHHhcccchhhhh-cCChhhcchhhhHHHHhhhcccccCCCCCccHHHHHHHhcccHHHhhHH
Confidence 8888877544422 255566555555 555555555555555555555540 4553
Q ss_pred hhhhcCCccceeccccccccCccccccccccccCCCCccCCCC
Q 045127 136 ESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLHSGL 178 (508)
Q Consensus 136 ~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~~~n~~ 178 (508)
+....+.+|..|||.+|+++. .|.....+.+++.+++++|..
T Consensus 246 e~~~~L~~l~vLDLRdNklke-~Pde~clLrsL~rLDlSNN~i 287 (565)
T KOG0472|consen 246 EHLKHLNSLLVLDLRDNKLKE-VPDEICLLRSLERLDLSNNDI 287 (565)
T ss_pred HHhcccccceeeecccccccc-CchHHHHhhhhhhhcccCCcc
Confidence 344467777777788888877 566666677788888887754
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.08 E-value=9.2e-11 Score=119.94 Aligned_cols=229 Identities=14% Similarity=0.075 Sum_probs=163.2
Q ss_pred HHHhhcCCCCCceeeecCCeEEEEEEE--CCCCEEEEEEecCCCCHHH-HHHHHHHHHHHhhc-CCCCccceeeEEecCC
Q 045127 233 LKAATNGFSKKNLVGKNEGAAIYKGIL--RDGTRVKIEIYKGDVSREI-RDEFVEECKLLVQF-QHKNLIRVLGWNNSRR 308 (508)
Q Consensus 233 l~~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~~vavK~~~~~~~~~~-~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 308 (508)
....+.+|.....||.|.|+.|++... .++..+++|.......... ...-..|+-+...+ .|.++++.+..+..-+
T Consensus 260 ~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r 339 (524)
T KOG0601|consen 260 TSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLR 339 (524)
T ss_pred ceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccc
Confidence 455677899999999999999998874 4678899988765443322 22234566666666 4888888887777777
Q ss_pred eeEEEEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCC-CceEEeeccCCC---
Q 045127 309 TRAIVTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDN-LEPLISRFKIEY--- 383 (508)
Q Consensus 309 ~~~lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~-~~~kl~Dfg~~~--- 383 (508)
..|+--|||+++++..... ...+++..++++..|++.++.++|+. .++|+|+||+||++..+ +..+++|||...
T Consensus 340 ~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~-~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~ 418 (524)
T KOG0601|consen 340 QGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSK-LFVHLDVKPSNILISNDGFFSKLGDFGCWTRLA 418 (524)
T ss_pred cccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccch-hhhcccccccceeeccchhhhhccccccccccc
Confidence 7789999999998887665 55678888999999999999999999 99999999999999875 778888887642
Q ss_pred -----------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccC
Q 045127 384 -----------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMML 440 (508)
Q Consensus 384 -----------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 440 (508)
.+-.+.|+||||..+.|.+++..--... .+|.. +.......
T Consensus 419 ~~~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~-------~~~~~---------i~~~~~p~ 482 (524)
T KOG0601|consen 419 FSSGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESG-------VQSLT---------IRSGDTPN 482 (524)
T ss_pred eecccccccccccccchhhccccccccccccccccccccccccCcccCccc-------cccee---------eecccccC
Confidence 1235789999999999999986542211 01110 00000100
Q ss_pred CcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHh
Q 045127 441 TENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYK 481 (508)
Q Consensus 441 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~ 481 (508)
.. .....+..+...+..+++..||.+.+...+.+....
T Consensus 483 ~~---~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~~~ 520 (524)
T KOG0601|consen 483 LP---GLKLQLQVLLKVMINPDRKRRPSAVELSLHSEFYRD 520 (524)
T ss_pred CC---chHHhhhhhhhhhcCCccccchhhhhhcccchhhhh
Confidence 11 111333445555678999999999888776655443
|
|
| >PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=99.06 E-value=9.5e-10 Score=99.87 Aligned_cols=127 Identities=20% Similarity=0.276 Sum_probs=85.4
Q ss_pred EEEEEEECCCCEEEEEEecCCCC--------------------H-----HHHHHHHHHHHHHhhcCCC--CccceeeEEe
Q 045127 253 AIYKGILRDGTRVKIEIYKGDVS--------------------R-----EIRDEFVEECKLLVQFQHK--NLIRVLGWNN 305 (508)
Q Consensus 253 ~V~~~~~~~~~~vavK~~~~~~~--------------------~-----~~~~~~~~E~~~l~~l~h~--niv~~~~~~~ 305 (508)
.||.|..++|..+|+|+.+.... . .......+|.+.|.++..- ++++++++.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 48999998999999999853210 0 1134578899999999755 566776553
Q ss_pred cCCeeEEEEeecC--CCCHHHHhccCCCCHHHHHHHHHHHHHHHHHH-hhCCCccccCCCCCCEEecCCCceEEeeccCC
Q 045127 306 SRRTRAIVTEWTN--GGNVELWLSESAPSWKHRLKVLIGVVEAMCYL-QEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE 382 (508)
Q Consensus 306 ~~~~~~lv~e~~~--~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~L-H~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~ 382 (508)
.-++||||++ |..+..+. ...++......++.+++..+..+ |.. |++|||+.+.||+++++ .+.++|||.+
T Consensus 80 ---~~~ivME~I~~~G~~~~~l~-~~~~~~~~~~~~~~~il~~~~~~~~~~-givHGDLs~~NIlv~~~-~~~iIDf~qa 153 (188)
T PF01163_consen 80 ---RNVIVMEYIGEDGVPLPRLK-DVDLSPEEPKELLEEILEEIIKMLHKA-GIVHGDLSEYNILVDDG-KVYIIDFGQA 153 (188)
T ss_dssp ---TTEEEEE--EETTEEGGCHH-HCGGGGSTHHHHHHHHHHHHHHHHHCT-TEEESS-STTSEEEETT-CEEE--GTTE
T ss_pred ---CCEEEEEecCCCccchhhHH-hccccchhHHHHHHHHHHHHHHHHHhc-CceecCCChhhEEeecc-eEEEEecCcc
Confidence 2379999998 54454433 22222455667788888866664 677 99999999999999977 9999999987
Q ss_pred CCCC
Q 045127 383 YQHR 386 (508)
Q Consensus 383 ~~~~ 386 (508)
....
T Consensus 154 v~~~ 157 (188)
T PF01163_consen 154 VDSS 157 (188)
T ss_dssp EETT
T ss_pred eecC
Confidence 5443
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A. |
| >KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.04 E-value=2.1e-11 Score=128.98 Aligned_cols=104 Identities=24% Similarity=0.313 Sum_probs=79.2
Q ss_pred cCCCCCcCeEeCccCcccccCCc-------cccEEEcccCcccCCCChhhhccCCccccccccccccCcCCchhhhcCCc
Q 045127 71 LRSRPKITPLYLSFNFFWKYCPL-------GIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLAN 143 (508)
Q Consensus 71 ~~~l~~L~~L~L~~N~l~~~~p~-------~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp~~~~~~l~~ 143 (508)
+.+.++|+.|+|++|+|.. +|+ +|+.|+||+|+++ .+|.++..+..|++|...+|+|. .+| .+..+++
T Consensus 379 l~~~~hLKVLhLsyNrL~~-fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP--e~~~l~q 453 (1081)
T KOG0618|consen 379 LVNFKHLKVLHLSYNRLNS-FPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP--ELAQLPQ 453 (1081)
T ss_pred hccccceeeeeeccccccc-CCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech--hhhhcCc
Confidence 5666677777777777753 552 2377777777777 66777777777777777777777 777 5788999
Q ss_pred cceeccccccccCccccccccccccCCCCccCCCCC
Q 045127 144 LTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLHSGLF 179 (508)
Q Consensus 144 L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~~~n~~~ 179 (508)
|+.+|+|.|+|+.+..+....-++|+.+++.||.++
T Consensus 454 L~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~~l 489 (1081)
T KOG0618|consen 454 LKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNTRL 489 (1081)
T ss_pred ceEEecccchhhhhhhhhhCCCcccceeeccCCccc
Confidence 999999999999866665555589999999999865
|
|
| >PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A | Back alignment and domain information |
|---|
Probab=98.99 E-value=2.1e-10 Score=102.53 Aligned_cols=112 Identities=25% Similarity=0.290 Sum_probs=37.9
Q ss_pred CcccCCCccccCCCCCcCeEeCccCccccc--CC---ccccEEEcccCcccCCCChhhhccCCccccccccccccCcCCc
Q 045127 61 NCVESFPKIDLRSRPKITPLYLSFNFFWKY--CP---LGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPV 135 (508)
Q Consensus 61 n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~--~p---~~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp~ 135 (508)
+.+..++. +.+..+++.|+|++|.|+.. +. ..++.|+||+|.|+. ++ .+..+++|++|++++|+|+ .++
T Consensus 7 ~~i~~~~~--~~n~~~~~~L~L~~n~I~~Ie~L~~~l~~L~~L~Ls~N~I~~-l~-~l~~L~~L~~L~L~~N~I~-~i~- 80 (175)
T PF14580_consen 7 NMIEQIAQ--YNNPVKLRELNLRGNQISTIENLGATLDKLEVLDLSNNQITK-LE-GLPGLPRLKTLDLSNNRIS-SIS- 80 (175)
T ss_dssp -------------------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS----S-C-
T ss_pred cccccccc--cccccccccccccccccccccchhhhhcCCCEEECCCCCCcc-cc-CccChhhhhhcccCCCCCC-ccc-
Confidence 45666664 67777889999999998743 22 356899999999984 44 5888999999999999999 776
Q ss_pred hhh-hcCCccceeccccccccCc-cccccccccccCCCCccCCCC
Q 045127 136 ESF-SVLANLTFLNLSYNHFSEM-KVSDTKFFQRFNSSSFLHSGL 178 (508)
Q Consensus 136 ~~~-~~l~~L~~l~l~~N~l~~~-~~~~~~~l~~l~~~~~~~n~~ 178 (508)
..+ ..+++|+.|++++|++..+ .......+++|..+++.+||.
T Consensus 81 ~~l~~~lp~L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv 125 (175)
T PF14580_consen 81 EGLDKNLPNLQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPV 125 (175)
T ss_dssp HHHHHH-TT--EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GG
T ss_pred cchHHhCCcCCEEECcCCcCCChHHhHHHHcCCCcceeeccCCcc
Confidence 444 4689999999999999873 123445678888889999976
|
|
| >PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=8.2e-10 Score=119.79 Aligned_cols=74 Identities=18% Similarity=0.228 Sum_probs=41.5
Q ss_pred ccEEEcccCcccCCCChhhhccCCccccccccccccCcCCchhhhcCCccceeccccccccCccccccccccccCCCCcc
Q 045127 95 IMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFL 174 (508)
Q Consensus 95 l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~~ 174 (508)
|+.|+|++|+|++ +|.. .++|+.|++++|+|+ .+| .. ..+|+.|++++|+|+. .|..+..+.++..+++.
T Consensus 384 L~~LdLs~N~Lt~-LP~l---~s~L~~LdLS~N~Ls-sIP-~l---~~~L~~L~Ls~NqLt~-LP~sl~~L~~L~~LdLs 453 (788)
T PRK15387 384 LKELIVSGNRLTS-LPVL---PSELKELMVSGNRLT-SLP-ML---PSGLLSLSVYRNQLTR-LPESLIHLSSETTVNLE 453 (788)
T ss_pred cceEEecCCcccC-CCCc---ccCCCEEEccCCcCC-CCC-cc---hhhhhhhhhccCcccc-cChHHhhccCCCeEECC
Confidence 3455555555552 3322 234555666666665 455 22 2345666666666665 45555666677777777
Q ss_pred CCCC
Q 045127 175 HSGL 178 (508)
Q Consensus 175 ~n~~ 178 (508)
+|++
T Consensus 454 ~N~L 457 (788)
T PRK15387 454 GNPL 457 (788)
T ss_pred CCCC
Confidence 7765
|
|
| >PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional | Back alignment and domain information |
|---|
Probab=98.92 E-value=1.1e-09 Score=119.19 Aligned_cols=115 Identities=17% Similarity=0.227 Sum_probs=54.9
Q ss_pred cccccccCCCCCCCCCCcCCcCCCCCccccccCCC--CCCcchhcccccccccccccCCCCCcccCCCccccCCCCCcCe
Q 045127 2 VVEDLNNLHPPPDFNSTIMNNCIHNPSLKYCNSSS--PMDLNEIFKSTIVASHLCNESKNPNCVESFPKIDLRSRPKITP 79 (508)
Q Consensus 2 ~~~~l~~l~~~~~~~~~~~~~c~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~l~~L~~~~n~~~~~p~~~~~~l~~L~~ 79 (508)
+++.+..|++..|-...+|..-..+ +..++... ...+|..+ +..+..|....|.+..||. .+. ++|+.
T Consensus 197 Ip~~L~~L~Ls~N~LtsLP~~l~~n--L~~L~Ls~N~LtsLP~~l-----~~~L~~L~Ls~N~L~~LP~-~l~--s~L~~ 266 (754)
T PRK15370 197 IPEQITTLILDNNELKSLPENLQGN--IKTLYANSNQLTSIPATL-----PDTIQEMELSINRITELPE-RLP--SALQS 266 (754)
T ss_pred cccCCcEEEecCCCCCcCChhhccC--CCEEECCCCccccCChhh-----hccccEEECcCCccCcCCh-hHh--CCCCE
Confidence 3455666666666666665543222 22222111 11222211 1133444444555666665 332 35666
Q ss_pred EeCccCcccccCC----ccccEEEcccCcccCCCChhhhccCCcccccccccccc
Q 045127 80 LYLSFNFFWKYCP----LGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLS 130 (508)
Q Consensus 80 L~L~~N~l~~~~p----~~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 130 (508)
|+|++|+|+. +| ..|+.|+|++|+|+ .+|..+. ++|+.|++++|+++
T Consensus 267 L~Ls~N~L~~-LP~~l~~sL~~L~Ls~N~Lt-~LP~~lp--~sL~~L~Ls~N~Lt 317 (754)
T PRK15370 267 LDLFHNKISC-LPENLPEELRYLSVYDNSIR-TLPAHLP--SGITHLNVQSNSLT 317 (754)
T ss_pred EECcCCccCc-cccccCCCCcEEECCCCccc-cCcccch--hhHHHHHhcCCccc
Confidence 6666666653 33 34566666666666 3443332 23444444444444
|
|
| >PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A | Back alignment and domain information |
|---|
Probab=98.92 E-value=4.9e-10 Score=82.40 Aligned_cols=60 Identities=42% Similarity=0.594 Sum_probs=52.8
Q ss_pred cccEEEcccCcccCCCChhhhccCCccccccccccccCcCCchhhhcCCccceeccccccc
Q 045127 94 GIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHF 154 (508)
Q Consensus 94 ~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp~~~~~~l~~L~~l~l~~N~l 154 (508)
.+++|+|++|+|+...+..|.++++|++|++++|+++ .+|++.|.++++|+.|++++|+|
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~-~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLT-SIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSES-EEETTTTTTSTTESEEEETSSSB
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccC-ccCHHHHcCCCCCCEEeCcCCcC
Confidence 4677888888888676788999999999999999999 77778999999999999999986
|
... |
| >KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.92 E-value=9.9e-11 Score=113.18 Aligned_cols=86 Identities=19% Similarity=0.172 Sum_probs=79.4
Q ss_pred cEEEcccCcccCCCChhhhccCCccccccccccccCcCCchhhhcCCccceeccccccccCccccccccccccCCCCccC
Q 045127 96 MSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLH 175 (508)
Q Consensus 96 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~~~ 175 (508)
+.|+|++|+|+++-+.+|.++..++.|+|..|+|. .+....|.++..|++|+|.+|+|+.+.+..|..+..+..+.+..
T Consensus 277 ~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~-~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~ 355 (498)
T KOG4237|consen 277 RKLNLSNNKITRIEDGAFEGAAELQELYLTRNKLE-FVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLS 355 (498)
T ss_pred eEeccCCCccchhhhhhhcchhhhhhhhcCcchHH-HHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehcc
Confidence 68999999999999999999999999999999999 77778999999999999999999998888888899999999999
Q ss_pred CCCC-CCC
Q 045127 176 SGLF-PGH 182 (508)
Q Consensus 176 n~~~-~c~ 182 (508)
|+|. .|.
T Consensus 356 Np~~CnC~ 363 (498)
T KOG4237|consen 356 NPFNCNCR 363 (498)
T ss_pred CcccCccc
Confidence 9985 565
|
|
| >COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.92 E-value=8.3e-09 Score=96.44 Aligned_cols=136 Identities=15% Similarity=0.195 Sum_probs=103.2
Q ss_pred CCCceeeecCCeEEEEEEECCCCEEEEEEecCCCC---------------------HHHHHHHHHHHHHHhhcCCC--Cc
Q 045127 241 SKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVS---------------------REIRDEFVEECKLLVQFQHK--NL 297 (508)
Q Consensus 241 ~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~---------------------~~~~~~~~~E~~~l~~l~h~--ni 297 (508)
.+++.||-|.-+.||.|..+.|.++|||.-+.... ...+....+|.++|.++... .+
T Consensus 94 ~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~V 173 (304)
T COG0478 94 AIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVKV 173 (304)
T ss_pred hhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCCC
Confidence 35589999999999999999999999997642211 01234568899999999755 67
Q ss_pred cceeeEEecCCeeEEEEeecCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEe
Q 045127 298 IRVLGWNNSRRTRAIVTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLIS 377 (508)
Q Consensus 298 v~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~ 377 (508)
.+.+++- ...+||||++|-.|... +++....-.++..|++-+.-+-.. |+||||+.+-||+++++|.+.++
T Consensus 174 P~P~~~n----RHaVvMe~ieG~eL~~~----r~~~en~~~il~~il~~~~~~~~~-GiVHGDlSefNIlV~~dg~~~vI 244 (304)
T COG0478 174 PKPIAWN----RHAVVMEYIEGVELYRL----RLDVENPDEILDKILEEVRKAYRR-GIVHGDLSEFNILVTEDGDIVVI 244 (304)
T ss_pred CCccccc----cceeeeehcccceeecc----cCcccCHHHHHHHHHHHHHHHHHc-CccccCCchheEEEecCCCEEEE
Confidence 7777653 34799999998655543 224455556666777777666677 99999999999999999999999
Q ss_pred eccCCCCC
Q 045127 378 RFKIEYQH 385 (508)
Q Consensus 378 Dfg~~~~~ 385 (508)
||-.+...
T Consensus 245 DwPQ~v~~ 252 (304)
T COG0478 245 DWPQAVPI 252 (304)
T ss_pred eCcccccC
Confidence 99765443
|
|
| >PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional | Back alignment and domain information |
|---|
Probab=98.87 E-value=2.8e-09 Score=115.71 Aligned_cols=98 Identities=27% Similarity=0.288 Sum_probs=76.7
Q ss_pred ccccCCCCCcccCCCccccCCCCCcCeEeCccCccccc--CCccccEEEcccCcccCCCChhhhccCCcccccccccccc
Q 045127 53 LCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKY--CPLGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLS 130 (508)
Q Consensus 53 l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~--~p~~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 130 (508)
+..|...+|.+..+|. . .++|+.|+|++|+|++. .|..++.|+|++|+|+ .+|... .+|+.|+|++|+|+
T Consensus 364 L~~L~Ls~N~L~~LP~-l---~~~L~~LdLs~N~Lt~LP~l~s~L~~LdLS~N~Ls-sIP~l~---~~L~~L~Ls~NqLt 435 (788)
T PRK15387 364 LYKLWAYNNRLTSLPA-L---PSGLKELIVSGNRLTSLPVLPSELKELMVSGNRLT-SLPMLP---SGLLSLSVYRNQLT 435 (788)
T ss_pred cceehhhccccccCcc-c---ccccceEEecCCcccCCCCcccCCCEEEccCCcCC-CCCcch---hhhhhhhhccCccc
Confidence 3344444556666664 2 24789999999999862 2356799999999999 477543 57889999999999
Q ss_pred CcCCchhhhcCCccceeccccccccCcccc
Q 045127 131 GDIPVESFSVLANLTFLNLSYNHFSEMKVS 160 (508)
Q Consensus 131 g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~ 160 (508)
.+| ..+..+++|+.|+|++|+|++..+.
T Consensus 436 -~LP-~sl~~L~~L~~LdLs~N~Ls~~~~~ 463 (788)
T PRK15387 436 -RLP-ESLIHLSSETTVNLEGNPLSERTLQ 463 (788)
T ss_pred -ccC-hHHhhccCCCeEECCCCCCCchHHH
Confidence 999 7899999999999999999994443
|
|
| >PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional | Back alignment and domain information |
|---|
Probab=98.87 E-value=1.7e-09 Score=117.96 Aligned_cols=112 Identities=21% Similarity=0.271 Sum_probs=55.8
Q ss_pred cCCCCCcccCCCccccCCCCCcCeEeCccCccccc---CCccccEEEcccCcccCCCChhhhccCCccccccccccccCc
Q 045127 56 ESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKY---CPLGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGD 132 (508)
Q Consensus 56 L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~---~p~~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~ 132 (508)
|....|.+..+|. .+. ++|+.|++++|.+++. +|+.|+.|+|++|+|+ .+|..+. ++|+.|+|++|+|+ .
T Consensus 309 L~Ls~N~Lt~LP~-~l~--~sL~~L~Ls~N~Lt~LP~~l~~sL~~L~Ls~N~L~-~LP~~lp--~~L~~LdLs~N~Lt-~ 381 (754)
T PRK15370 309 LNVQSNSLTALPE-TLP--PGLKTLEAGENALTSLPASLPPELQVLDVSKNQIT-VLPETLP--PTITTLDVSRNALT-N 381 (754)
T ss_pred HHhcCCccccCCc-ccc--ccceeccccCCccccCChhhcCcccEEECCCCCCC-cCChhhc--CCcCEEECCCCcCC-C
Confidence 3333344444443 221 4555666666655531 2234566666666665 3454442 45666666666666 5
Q ss_pred CCchhhhcCCccceeccccccccCccccccc----cccccCCCCccCCCC
Q 045127 133 IPVESFSVLANLTFLNLSYNHFSEMKVSDTK----FFQRFNSSSFLHSGL 178 (508)
Q Consensus 133 lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~----~l~~l~~~~~~~n~~ 178 (508)
+| ..+. .+|+.|++++|+|++ .|..+. .+.++..+.+.+|++
T Consensus 382 LP-~~l~--~sL~~LdLs~N~L~~-LP~sl~~~~~~~~~l~~L~L~~Npl 427 (754)
T PRK15370 382 LP-ENLP--AALQIMQASRNNLVR-LPESLPHFRGEGPQPTRIIVEYNPF 427 (754)
T ss_pred CC-HhHH--HHHHHHhhccCCccc-CchhHHHHhhcCCCccEEEeeCCCc
Confidence 55 3332 246666666666665 332221 123445555566654
|
|
| >COG0661 AarF Predicted unusual protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.86 E-value=9.2e-08 Score=99.70 Aligned_cols=159 Identities=14% Similarity=0.226 Sum_probs=108.3
Q ss_pred CCCCCceeeecCCeEEEEEEECCCCEEEEEEecCCCCHHHH---------------------------------------
Q 045127 239 GFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIR--------------------------------------- 279 (508)
Q Consensus 239 ~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~--------------------------------------- 279 (508)
.|+. +.|+.++-|.||+|++++|+.||||+.+++..+...
T Consensus 127 eF~~-~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~E 205 (517)
T COG0661 127 EFEP-EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREE 205 (517)
T ss_pred HcCC-CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHH
Confidence 3443 789999999999999999999999999766432110
Q ss_pred HHHHHHHHHHhhcC-----CCCccceeeEEecCCeeEEEEeecCCCCHHHHh--ccCCCCHHHHHHHHHHHHHH-HHHHh
Q 045127 280 DEFVEECKLLVQFQ-----HKNLIRVLGWNNSRRTRAIVTEWTNGGNVELWL--SESAPSWKHRLKVLIGVVEA-MCYLQ 351 (508)
Q Consensus 280 ~~~~~E~~~l~~l~-----h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l--~~~~l~~~~~~~i~~~i~~~-L~~LH 351 (508)
-++.+|...+.+++ .+++.-.-=|..-.....++|||++|-.+.+.. +....+... ++..++++ +..+-
T Consensus 206 lDy~~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~g~d~k~---ia~~~~~~f~~q~~ 282 (517)
T COG0661 206 LDYRREAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSAGIDRKE---LAELLVRAFLRQLL 282 (517)
T ss_pred hCHHHHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHhcCCCHHH---HHHHHHHHHHHHHH
Confidence 12455665555552 344332222333345568999999999888874 355566333 33333332 33334
Q ss_pred hCCCccccCCCCCCEEecCCCceEEeeccCCCCCCCcchhhHHHHHHHHHHh
Q 045127 352 EQWPEVDYDLRTGSVLLTDNLEPLISRFKIEYQHRSTKYVYKFGLFLLEMIT 403 (508)
Q Consensus 352 ~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~Dv~SlGvil~ellt 403 (508)
.. |+.|.|.+|.||+++.+++..+.|||+.+..+++ +.+-+.-+++.++.
T Consensus 283 ~d-gffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~~-~r~~l~~~~~a~~~ 332 (517)
T COG0661 283 RD-GFFHADPHPGNILVRSDGRIVLLDFGIVGRLDPK-FRRYLAELLLAFLN 332 (517)
T ss_pred hc-CccccCCCccceEEecCCcEEEEcCcceecCCHH-HHHHHHHHHHHHHh
Confidence 46 9999999999999999999999999999888765 55555555555544
|
|
| >KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.86 E-value=1.3e-10 Score=123.23 Aligned_cols=79 Identities=19% Similarity=0.259 Sum_probs=44.1
Q ss_pred cEEEcccCcccCCCChhhhccCCccccccccccccCcCCchhhhcCCccceeccccccccCccccccccccccCCCCccC
Q 045127 96 MSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLH 175 (508)
Q Consensus 96 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~~~ 175 (508)
+.|+|++|+|.......+.++..|+.|+||+|+|+ .|| +.+.++..|++|..-+|+|.. .|.+..++.++.++++.
T Consensus 386 KVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp-~tva~~~~L~tL~ahsN~l~~--fPe~~~l~qL~~lDlS~ 461 (1081)
T KOG0618|consen 386 KVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLP-DTVANLGRLHTLRAHSNQLLS--FPELAQLPQLKVLDLSC 461 (1081)
T ss_pred eeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhh-HHHHhhhhhHHHhhcCCceee--chhhhhcCcceEEeccc
Confidence 45555555555222223455555555566666655 555 555555556666555555553 23555666666666666
Q ss_pred CCC
Q 045127 176 SGL 178 (508)
Q Consensus 176 n~~ 178 (508)
|..
T Consensus 462 N~L 464 (1081)
T KOG0618|consen 462 NNL 464 (1081)
T ss_pred chh
Confidence 643
|
|
| >KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=98.85 E-value=1.2e-07 Score=95.41 Aligned_cols=155 Identities=14% Similarity=0.107 Sum_probs=121.6
Q ss_pred CeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEec----CCeeEEEEeecCC-CCHHH
Q 045127 251 GAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNS----RRTRAIVTEWTNG-GNVEL 324 (508)
Q Consensus 251 ~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~----~~~~~lv~e~~~~-gsL~~ 324 (508)
..+.|++.. .||..+++|+++..... .......-++.++++.|+|+|++..++.. ....++||+|+++ ++|.+
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~-~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d 367 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRDQ-STNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYD 367 (655)
T ss_pred cceeEeeeeccCCceeeeeeecccccc-CcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHH
Confidence 467799985 58999999999543322 22233456788999999999999998763 3467899999986 46665
Q ss_pred Hhc----------------cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCCCC---
Q 045127 325 WLS----------------ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEYQH--- 385 (508)
Q Consensus 325 ~l~----------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~--- 385 (508)
+-- ....++...+.++.|+..||.++|+. |..-+-+.|.+|+++.+.+++|+..|.....
T Consensus 368 ~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss-GLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~d 446 (655)
T KOG3741|consen 368 LYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS-GLACKTLDLKKILVTGKMRIRISGCGIMDVLQED 446 (655)
T ss_pred HHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc-CceeecccHhHeEeeCcceEEEecccceeeecCC
Confidence 432 23457888999999999999999999 9999999999999999999999887764321
Q ss_pred -------CCcchhhHHHHHHHHHHhCCCC
Q 045127 386 -------RSTKYVYKFGLFLLEMITNRRP 407 (508)
Q Consensus 386 -------~~~~Dv~SlGvil~elltg~~P 407 (508)
-.+-|.=.||.+++.|.||..-
T Consensus 447 ~~~~le~~Qq~D~~~lG~ll~aLAt~~~n 475 (655)
T KOG3741|consen 447 PTEPLESQQQNDLRDLGLLLLALATGTEN 475 (655)
T ss_pred CCcchhHHhhhhHHHHHHHHHHHhhcccc
Confidence 1356899999999999999543
|
|
| >KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=98.82 E-value=3.4e-10 Score=114.17 Aligned_cols=120 Identities=24% Similarity=0.316 Sum_probs=86.5
Q ss_pred cccCCCCCcccCCCccccCCCCCcCeEeCccCcccccCCccc-----cEEEcccCcccCCCChhhhccCCcccccccccc
Q 045127 54 CNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCPLGI-----MSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQ 128 (508)
Q Consensus 54 ~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~l-----~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~ 128 (508)
..|.++.|.+.+||. .+++|..|+.|||+.|+++. +|..+ +.|-+++|+++ .+|..++.+..|..||.+.|+
T Consensus 101 e~liLy~n~~r~ip~-~i~~L~~lt~l~ls~NqlS~-lp~~lC~lpLkvli~sNNkl~-~lp~~ig~~~tl~~ld~s~ne 177 (722)
T KOG0532|consen 101 ESLILYHNCIRTIPE-AICNLEALTFLDLSSNQLSH-LPDGLCDLPLKVLIVSNNKLT-SLPEEIGLLPTLAHLDVSKNE 177 (722)
T ss_pred HHHHHHhccceecch-hhhhhhHHHHhhhccchhhc-CChhhhcCcceeEEEecCccc-cCCcccccchhHHHhhhhhhh
Confidence 344455577888888 88888888888888888864 55443 77777777776 666666666666666666666
Q ss_pred ccCcCCchhhhcCC----------------------ccceeccccccccCccccccccccccCCCCccCCCCC
Q 045127 129 LSGDIPVESFSVLA----------------------NLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLHSGLF 179 (508)
Q Consensus 129 l~g~lp~~~~~~l~----------------------~L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~~~n~~~ 179 (508)
+. ++| ..++.+. .|..||+|+|+++. .|-.|..++.|.++.|.+|+..
T Consensus 178 i~-slp-sql~~l~slr~l~vrRn~l~~lp~El~~LpLi~lDfScNkis~-iPv~fr~m~~Lq~l~LenNPLq 247 (722)
T KOG0532|consen 178 IQ-SLP-SQLGYLTSLRDLNVRRNHLEDLPEELCSLPLIRLDFSCNKISY-LPVDFRKMRHLQVLQLENNPLQ 247 (722)
T ss_pred hh-hch-HHhhhHHHHHHHHHhhhhhhhCCHHHhCCceeeeecccCceee-cchhhhhhhhheeeeeccCCCC
Confidence 65 544 2233332 46678888888888 7777888899999999999876
|
|
| >PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A | Back alignment and domain information |
|---|
Probab=98.81 E-value=4e-09 Score=94.34 Aligned_cols=101 Identities=30% Similarity=0.334 Sum_probs=42.4
Q ss_pred cccccCCCCCcccCCCccccC-CCCCcCeEeCccCcccccC--C--ccccEEEcccCcccCCCChhh-hccCCccccccc
Q 045127 52 HLCNESKNPNCVESFPKIDLR-SRPKITPLYLSFNFFWKYC--P--LGIMSIDLSNNSLKGAFPIDV-LLCTQIQALDLS 125 (508)
Q Consensus 52 ~l~~L~~~~n~~~~~p~~~~~-~l~~L~~L~L~~N~l~~~~--p--~~l~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~l~ 125 (508)
.+..|++..|.+..|. .++ .+.+|+.|+|++|.|+... | ..+++|+|++|+|+ .++..+ ..+++|+.|+|+
T Consensus 20 ~~~~L~L~~n~I~~Ie--~L~~~l~~L~~L~Ls~N~I~~l~~l~~L~~L~~L~L~~N~I~-~i~~~l~~~lp~L~~L~L~ 96 (175)
T PF14580_consen 20 KLRELNLRGNQISTIE--NLGATLDKLEVLDLSNNQITKLEGLPGLPRLKTLDLSNNRIS-SISEGLDKNLPNLQELYLS 96 (175)
T ss_dssp ------------------S--TT-TT--EEE-TTS--S--TT----TT--EEE--SS----S-CHHHHHH-TT--EEE-T
T ss_pred cccccccccccccccc--chhhhhcCCCEEECCCCCCccccCccChhhhhhcccCCCCCC-ccccchHHhCCcCCEEECc
Confidence 4556777778899886 476 5899999999999998532 2 45699999999999 455555 479999999999
Q ss_pred cccccCcCC-chhhhcCCccceeccccccccC
Q 045127 126 YNQLSGDIP-VESFSVLANLTFLNLSYNHFSE 156 (508)
Q Consensus 126 ~N~l~g~lp-~~~~~~l~~L~~l~l~~N~l~~ 156 (508)
+|+|. .+- -..+..+++|+.|++.+|.++.
T Consensus 97 ~N~I~-~l~~l~~L~~l~~L~~L~L~~NPv~~ 127 (175)
T PF14580_consen 97 NNKIS-DLNELEPLSSLPKLRVLSLEGNPVCE 127 (175)
T ss_dssp TS----SCCCCGGGGG-TT--EEE-TT-GGGG
T ss_pred CCcCC-ChHHhHHHHcCCCcceeeccCCcccc
Confidence 99998 333 1357789999999999999986
|
|
| >PRK09902 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.77 E-value=1.2e-07 Score=86.74 Aligned_cols=135 Identities=11% Similarity=0.069 Sum_probs=101.2
Q ss_pred eeecCCeEEEEEEECCCCEEEEEEecCCCC-----HHHHHHHHHHHHHHhhcCC--CCccceeeEEe-c----CCeeEEE
Q 045127 246 VGKNEGAAIYKGILRDGTRVKIEIYKGDVS-----REIRDEFVEECKLLVQFQH--KNLIRVLGWNN-S----RRTRAIV 313 (508)
Q Consensus 246 lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~E~~~l~~l~h--~niv~~~~~~~-~----~~~~~lv 313 (508)
-|+||.+.|++.... |..+-+|.-..... +-....|.+|+..+.++.. -.+.++. ++. . ....+||
T Consensus 26 ~~rgG~SgV~r~~~~-g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LV 103 (216)
T PRK09902 26 YRRNGMSGVQCVERN-GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLV 103 (216)
T ss_pred cCCCCcceEEEEEeC-CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEE
Confidence 467899999998775 44688887642111 2246789999999999853 2355555 332 1 1245899
Q ss_pred EeecCC-CCHHHHhccC---CCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCc--eEEeeccCCC
Q 045127 314 TEWTNG-GNVELWLSES---APSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLE--PLISRFKIEY 383 (508)
Q Consensus 314 ~e~~~~-gsL~~~l~~~---~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~--~kl~Dfg~~~ 383 (508)
+|-+.+ -+|.+++... +.+...+..+..++++.++-||+. |+.|+|+.+.||+++.++. ++++||--++
T Consensus 104 Te~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~-Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r 178 (216)
T PRK09902 104 TEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSV-NRQHGCCYVRHIYVKTEGKAEAGFLDLEKSR 178 (216)
T ss_pred EEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHC-CCcCCCCCHhheeecCCCCeeEEEEEhhccc
Confidence 997754 5898888643 447777889999999999999999 9999999999999986666 9999996654
|
|
| >PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=98.76 E-value=7.5e-08 Score=89.57 Aligned_cols=107 Identities=13% Similarity=0.124 Sum_probs=85.6
Q ss_pred HHHHHHHHHHHhhcC--CCCccceeeEEecC----CeeEEEEeecCCC-CHHHHhcc-CCCCHHHHHHHHHHHHHHHHHH
Q 045127 279 RDEFVEECKLLVQFQ--HKNLIRVLGWNNSR----RTRAIVTEWTNGG-NVELWLSE-SAPSWKHRLKVLIGVVEAMCYL 350 (508)
Q Consensus 279 ~~~~~~E~~~l~~l~--h~niv~~~~~~~~~----~~~~lv~e~~~~g-sL~~~l~~-~~l~~~~~~~i~~~i~~~L~~L 350 (508)
.....+|...+..+. .-.+++.+++.... ...++|||++++. +|.+++.. ...+......++.++++.++-|
T Consensus 55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~~~~~~~~~ll~~l~~~i~~l 134 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQLDPSQRRELLRALARLIAKL 134 (206)
T ss_pred chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcccchhhHHHHHHHHHHHHHHH
Confidence 456788888888875 33456667776643 2458999999884 79998873 3466777889999999999999
Q ss_pred hhCCCccccCCCCCCEEecCCC---ceEEeeccCCCCCC
Q 045127 351 QEQWPEVDYDLRTGSVLLTDNL---EPLISRFKIEYQHR 386 (508)
Q Consensus 351 H~~~~iiH~Dlkp~NIll~~~~---~~kl~Dfg~~~~~~ 386 (508)
|.. ||+|+|+++.|||++.+. .+.++||+.+....
T Consensus 135 H~~-gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~~ 172 (206)
T PF06293_consen 135 HDA-GIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFRP 172 (206)
T ss_pred HHC-cCCCCCCCcccEEEeCCCCceeEEEEcchhceeCC
Confidence 999 999999999999999877 89999998765443
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane |
| >KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
Probab=98.65 E-value=4.9e-09 Score=98.15 Aligned_cols=120 Identities=22% Similarity=0.222 Sum_probs=68.2
Q ss_pred cccCCCCCcccCCCccccCCCCCcCeEeCccCcccccCC----ccccEEEcccCcccCCCChhhhccCCccccccccccc
Q 045127 54 CNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCP----LGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQL 129 (508)
Q Consensus 54 ~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p----~~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l 129 (508)
..|+++.|.++.|.. ++.-++.++.|++|+|.|+..-- .+++.||||+|.++ .+.++-..|.++..|.|+.|.|
T Consensus 287 telDLS~N~I~~iDE-SvKL~Pkir~L~lS~N~i~~v~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~La~N~i 364 (490)
T KOG1259|consen 287 TELDLSGNLITQIDE-SVKLAPKLRRLILSQNRIRTVQNLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLKLAQNKI 364 (490)
T ss_pred hhccccccchhhhhh-hhhhccceeEEeccccceeeehhhhhcccceEeecccchhH-hhhhhHhhhcCEeeeehhhhhH
Confidence 344445555666665 55556666666666666653211 24466666666665 4444555566666666666666
Q ss_pred cCcCCchhhhcCCccceeccccccccCc-cccccccccccCCCCccCCCC
Q 045127 130 SGDIPVESFSVLANLTFLNLSYNHFSEM-KVSDTKFFQRFNSSSFLHSGL 178 (508)
Q Consensus 130 ~g~lp~~~~~~l~~L~~l~l~~N~l~~~-~~~~~~~l~~l~~~~~~~n~~ 178 (508)
. ++. .+..|.+|..||+++|++..+ .+...++++-|..+.+.+||.
T Consensus 365 E-~LS--GL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl 411 (490)
T KOG1259|consen 365 E-TLS--GLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPL 411 (490)
T ss_pred h-hhh--hhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCc
Confidence 5 443 355666666666666666653 234445555556666666654
|
|
| >TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172 | Back alignment and domain information |
|---|
Probab=98.61 E-value=6.2e-07 Score=84.52 Aligned_cols=142 Identities=8% Similarity=0.058 Sum_probs=91.2
Q ss_pred ceeeecCCeEEEEEEECCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCC--ccceeeEEecCCeeEEEEeecCCCC
Q 045127 244 NLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKN--LIRVLGWNNSRRTRAIVTEWTNGGN 321 (508)
Q Consensus 244 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~~~~~~~~~~~~~lv~e~~~~gs 321 (508)
..||+|..+.||+. .+..+++|....... .....+|.++++.+..-. +.+.+++....+...+|||+++|.+
T Consensus 7 ~~i~~G~t~~~y~~---~~~~~VlR~~~~~~~---~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~ 80 (226)
T TIGR02172 7 TQTGEGGNGESYTH---KTGKWMLKLYNPGFD---KETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKR 80 (226)
T ss_pred eeecCCCCcceeEe---cCCCEEEEeCCCCCC---HHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCcc
Confidence 67899999999984 255678898865443 345688999999886433 5677888777777889999999863
Q ss_pred -HHHHh---------------------cc---CCCCHHHHH-HHHH----------HHHH-HHHHHhhCC---CccccCC
Q 045127 322 -VELWL---------------------SE---SAPSWKHRL-KVLI----------GVVE-AMCYLQEQW---PEVDYDL 361 (508)
Q Consensus 322 -L~~~l---------------------~~---~~l~~~~~~-~i~~----------~i~~-~L~~LH~~~---~iiH~Dl 361 (508)
+...+ +. ...+..... ++.. .+.+ ...+|.... .++|+|+
T Consensus 81 ~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~HgD~ 160 (226)
T TIGR02172 81 SFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLHGDF 160 (226)
T ss_pred chhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEecCC
Confidence 21111 01 111111111 0100 0111 122222111 5689999
Q ss_pred CCCCEEecCCCceEEeeccCCCCCCCcchhh
Q 045127 362 RTGSVLLTDNLEPLISRFKIEYQHRSTKYVY 392 (508)
Q Consensus 362 kp~NIll~~~~~~kl~Dfg~~~~~~~~~Dv~ 392 (508)
.|.||++++++ +.++||+.+..-++..|+-
T Consensus 161 ~~~Nii~~~~~-~~iIDwe~a~~Gdp~~Dla 190 (226)
T TIGR02172 161 QIGNLITSGKG-TYWIDLGDFGYGNPLFDLG 190 (226)
T ss_pred CCCcEEEcCCC-cEEEechhcCcCCHHHHHH
Confidence 99999999888 9999999988777777753
|
This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636. |
| >PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A | Back alignment and domain information |
|---|
Probab=98.59 E-value=1.5e-08 Score=74.34 Aligned_cols=60 Identities=30% Similarity=0.462 Sum_probs=55.9
Q ss_pred CCccccccccccccCcCCchhhhcCCccceeccccccccCccccccccccccCCCCccCCC
Q 045127 117 TQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLHSG 177 (508)
Q Consensus 117 ~~L~~L~l~~N~l~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~~~n~ 177 (508)
++|++|++++|+|+ .+|++.|..+++|++|++++|+++.+.+..+..+++++.+++++|.
T Consensus 1 p~L~~L~l~~n~l~-~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 1 PNLESLDLSNNKLT-EIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TTESEEEETSSTES-EECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred CcCcEEECCCCCCC-ccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 57999999999999 8898899999999999999999999777788999999999999986
|
... |
| >COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
Probab=98.58 E-value=1.1e-06 Score=81.64 Aligned_cols=154 Identities=21% Similarity=0.160 Sum_probs=108.3
Q ss_pred CCCHHHHHHhhcCCCCCceee---ecCCeEEEEEEECCCCEEEEEEecCCCCHH-----------------------HHH
Q 045127 227 KFTTWMLKAATNGFSKKNLVG---KNEGAAIYKGILRDGTRVKIEIYKGDVSRE-----------------------IRD 280 (508)
Q Consensus 227 ~~~~~~l~~~~~~~~~~~~lg---~G~~g~V~~~~~~~~~~vavK~~~~~~~~~-----------------------~~~ 280 (508)
..|.+.+.....+..+....| +|.-+.||+|...++..+|||+++.....- ...
T Consensus 34 ~~t~~~l~~L~~rg~i~~~~g~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~ 113 (268)
T COG1718 34 KRTLETLRRLLSRGVITELVGCISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFA 113 (268)
T ss_pred hHHHHHHHHHhcCCceeeeEeeecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHH
Confidence 445666666666666655544 677778999988889999999996432110 012
Q ss_pred HHHHHHHHHhhcC--CCCccceeeEEecCCeeEEEEeecCCC-CHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCcc
Q 045127 281 EFVEECKLLVQFQ--HKNLIRVLGWNNSRRTRAIVTEWTNGG-NVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEV 357 (508)
Q Consensus 281 ~~~~E~~~l~~l~--h~niv~~~~~~~~~~~~~lv~e~~~~g-sL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~ii 357 (508)
...+|+.-|+++. +-.+.+.+++.. -.+||||+... .-.-.|+...+...+...+..++++.+.-|-..+++|
T Consensus 114 W~~kEf~NL~R~~eAGVrvP~Pi~~~~----nVLvMEfIg~~g~pAP~LkDv~~e~~e~~~~~~~~v~~~~~l~~~a~LV 189 (268)
T COG1718 114 WARKEFRNLKRAYEAGVRVPEPIAFRN----NVLVMEFIGDDGLPAPRLKDVPLELEEAEGLYEDVVEYMRRLYKEAGLV 189 (268)
T ss_pred HHHHHHHHHHHHHHcCCCCCCceeecC----CeEEEEeccCCCCCCCCcccCCcCchhHHHHHHHHHHHHHHHHHhcCcc
Confidence 2456888888874 455666666543 37999998653 1222223344445467788889999999988844999
Q ss_pred ccCCCCCCEEecCCCceEEeeccCCCCC
Q 045127 358 DYDLRTGSVLLTDNLEPLISRFKIEYQH 385 (508)
Q Consensus 358 H~Dlkp~NIll~~~~~~kl~Dfg~~~~~ 385 (508)
|+||..-|||+. ++.+.++|||.+...
T Consensus 190 HgDLSEyNiL~~-~~~p~iID~~QaV~~ 216 (268)
T COG1718 190 HGDLSEYNILVH-DGEPYIIDVSQAVTI 216 (268)
T ss_pred cccchhhheEEE-CCeEEEEECcccccc
Confidence 999999999999 899999999987543
|
|
| >PLN03210 Resistant to P | Back alignment and domain information |
|---|
Probab=98.49 E-value=3.6e-07 Score=106.03 Aligned_cols=120 Identities=21% Similarity=0.292 Sum_probs=94.2
Q ss_pred ccccCCCCC-cccCCCccccCCCCCcCeEeCccCcccccCCc-----cccEEEcccCcccCCCChhhhccCCcccccccc
Q 045127 53 LCNESKNPN-CVESFPKIDLRSRPKITPLYLSFNFFWKYCPL-----GIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSY 126 (508)
Q Consensus 53 l~~L~~~~n-~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~-----~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~ 126 (508)
|..|....| .+..+|. ++++|++|+.|+|++|...+.+|. .|+.|+|++|.....+|.. ..+|+.|+|++
T Consensus 780 L~~L~Ls~n~~l~~lP~-si~~L~~L~~L~Ls~C~~L~~LP~~~~L~sL~~L~Ls~c~~L~~~p~~---~~nL~~L~Ls~ 855 (1153)
T PLN03210 780 LTRLFLSDIPSLVELPS-SIQNLHKLEHLEIENCINLETLPTGINLESLESLDLSGCSRLRTFPDI---STNISDLNLSR 855 (1153)
T ss_pred chheeCCCCCCccccCh-hhhCCCCCCEEECCCCCCcCeeCCCCCccccCEEECCCCCcccccccc---ccccCEeECCC
Confidence 444444443 5677898 899999999999999865455663 4699999998655566653 46899999999
Q ss_pred ccccCcCCchhhhcCCccceecccc-ccccCccccccccccccCCCCccCCCCC
Q 045127 127 NQLSGDIPVESFSVLANLTFLNLSY-NHFSEMKVSDTKFFQRFNSSSFLHSGLF 179 (508)
Q Consensus 127 N~l~g~lp~~~~~~l~~L~~l~l~~-N~l~~~~~~~~~~l~~l~~~~~~~n~~~ 179 (508)
|.++ .+| ..+..+++|+.|++++ |+|++ .+.....+++|..+++.+.+.+
T Consensus 856 n~i~-~iP-~si~~l~~L~~L~L~~C~~L~~-l~~~~~~L~~L~~L~l~~C~~L 906 (1153)
T PLN03210 856 TGIE-EVP-WWIEKFSNLSFLDMNGCNNLQR-VSLNISKLKHLETVDFSDCGAL 906 (1153)
T ss_pred CCCc-cCh-HHHhcCCCCCEEECCCCCCcCc-cCcccccccCCCeeecCCCccc
Confidence 9999 899 7899999999999987 88888 6666677888888888776544
|
syringae 6; Provisional |
| >PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY) | Back alignment and domain information |
|---|
Probab=98.47 E-value=2.6e-06 Score=78.33 Aligned_cols=139 Identities=12% Similarity=0.065 Sum_probs=91.0
Q ss_pred hhcCCCCCceeeecCCeEEEEEEECCCCEEEEEEecCCCCHHHH--------HHHHHHHHHHhhcC---CCCccceeeEE
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIR--------DEFVEECKLLVQFQ---HKNLIRVLGWN 304 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~--------~~~~~E~~~l~~l~---h~niv~~~~~~ 304 (508)
..++|+..+.+-......|.+... +|..+++|..+.......+ ....+++..+.+++ -.....++.+.
T Consensus 29 ~~~~~~~~kv~k~~~r~~ValIei-~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~ 107 (229)
T PF06176_consen 29 LDNNYKIIKVFKNTKRNYVALIEI-DGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAA 107 (229)
T ss_pred HhCCceEEEeecCCCccEEEEEEE-CCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeee
Confidence 346777778888877777777666 4788999998654322111 11233344344443 22233333332
Q ss_pred ec-----CCeeEEEEeecCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeec
Q 045127 305 NS-----RRTRAIVTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRF 379 (508)
Q Consensus 305 ~~-----~~~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Df 379 (508)
.. ....+++|||++|..|.+... +++ .++..+++++.-+|+. |+.|||.+|.|+++++++ ++++||
T Consensus 108 ekk~~~~~~~~~ll~EYIeG~~l~d~~~---i~e----~~~~ki~~~ikqlH~~-G~~HGD~hpgNFlv~~~~-i~iID~ 178 (229)
T PF06176_consen 108 EKKIFRYTSSYVLLMEYIEGVELNDIED---IDE----DLAEKIVEAIKQLHKH-GFYHGDPHPGNFLVSNNG-IRIIDT 178 (229)
T ss_pred eeeeccceeEEEEEEEEecCeecccchh---cCH----HHHHHHHHHHHHHHHc-CCccCCCCcCcEEEECCc-EEEEEC
Confidence 22 234568999999988876532 222 3456677889999999 999999999999998544 899999
Q ss_pred cCCCC
Q 045127 380 KIEYQ 384 (508)
Q Consensus 380 g~~~~ 384 (508)
+..+.
T Consensus 179 ~~k~~ 183 (229)
T PF06176_consen 179 QGKRM 183 (229)
T ss_pred ccccc
Confidence 77543
|
The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process |
| >PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily | Back alignment and domain information |
|---|
Probab=98.46 E-value=1.9e-06 Score=81.44 Aligned_cols=149 Identities=16% Similarity=0.135 Sum_probs=92.2
Q ss_pred CceeeecCCeEEEEEEECCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCC--CccceeeEEec---CCeeEEEEeec
Q 045127 243 KNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHK--NLIRVLGWNNS---RRTRAIVTEWT 317 (508)
Q Consensus 243 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~--niv~~~~~~~~---~~~~~lv~e~~ 317 (508)
.+.++.|..+.||+....+ ..+++|..... .....+.+|..+++.+... .+.+++.+... ....+++|+++
T Consensus 2 i~~l~~G~~n~~~~v~~~~-~~~vlK~~~~~---~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i 77 (239)
T PF01636_consen 2 IRPLSGGFSNRVYRVTTDD-GRYVLKFYRPP---DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYI 77 (239)
T ss_dssp EEEEEESSSSEEEEEEETT-SEEEEEEESSH---HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEE
T ss_pred CccCCCCCeeeEEEEEECC-cEEEEEEeCCC---CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEe
Confidence 3678999999999999876 69999998543 3567788899988888533 35667764432 33568999999
Q ss_pred CCCCHHH----------------Hhc---c-----CCCCHHH---------HHHH------------HHHHHH-HHHHHh
Q 045127 318 NGGNVEL----------------WLS---E-----SAPSWKH---------RLKV------------LIGVVE-AMCYLQ 351 (508)
Q Consensus 318 ~~gsL~~----------------~l~---~-----~~l~~~~---------~~~i------------~~~i~~-~L~~LH 351 (508)
++..+.. .+. . ....... .... ...+.+ .+..++
T Consensus 78 ~g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (239)
T PF01636_consen 78 PGRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQELE 157 (239)
T ss_dssp SSEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHHHHH
Confidence 9988877 111 1 1111110 0000 011222 233333
Q ss_pred h------CCCccccCCCCCCEEec-CCCceEEeeccCCCCCCCcchhhHHH
Q 045127 352 E------QWPEVDYDLRTGSVLLT-DNLEPLISRFKIEYQHRSTKYVYKFG 395 (508)
Q Consensus 352 ~------~~~iiH~Dlkp~NIll~-~~~~~kl~Dfg~~~~~~~~~Dv~SlG 395 (508)
+ ...++|+|+.|.||+++ +++.+.|+||+.+....+..|+..+.
T Consensus 158 ~~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~~~~~~Dla~~~ 208 (239)
T PF01636_consen 158 ALLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAGWGDPAYDLARLL 208 (239)
T ss_dssp HHHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-EEEETHHHHHHHH
T ss_pred hhhccCCCcEEEEeccccccceeeeccceeEEEecccceECCHHHHHHHHH
Confidence 2 11789999999999999 56666899999988877777775543
|
; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B .... |
| >KOG1235 consensus Predicted unusual protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.46 E-value=9.9e-07 Score=91.76 Aligned_cols=160 Identities=14% Similarity=0.117 Sum_probs=104.8
Q ss_pred ccCCCCCHHHHHHhh------------cCCCCCceeeecCCeEEEEEEECCCCEEEEEEecCCCCHHH------------
Q 045127 223 RRNHKFTTWMLKAAT------------NGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREI------------ 278 (508)
Q Consensus 223 ~~~~~~~~~~l~~~~------------~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~------------ 278 (508)
+.-+.++.+|+.+.. ..|+ .+.||.-+.|.||+|+.++|+.||||+-++......
T Consensus 135 D~~Pp~~~ee~~~i~e~ElG~~ie~if~~f~-~~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~ 213 (538)
T KOG1235|consen 135 DQAPPFPWEEAFKIFEEELGAPIEDIFSEFD-EEPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAK 213 (538)
T ss_pred ccCCCCCHHHHHHHHHHHhCCCHHHHHHhcC-cchhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHH
Confidence 455666666655433 2233 378999999999999999999999999876543211
Q ss_pred ------------------H------HHHHHHHHHHhhc----CCCC------ccceeeEEecCCeeEEEEeecCCCCHHH
Q 045127 279 ------------------R------DEFVEECKLLVQF----QHKN------LIRVLGWNNSRRTRAIVTEWTNGGNVEL 324 (508)
Q Consensus 279 ------------------~------~~~~~E~~~l~~l----~h~n------iv~~~~~~~~~~~~~lv~e~~~~gsL~~ 324 (508)
. -+|.+|.+-..++ .|-+ |.+++-.+ .....++||||+|..+.+
T Consensus 214 ~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA~Nae~~~~~f~~~~~~~~V~VP~Vy~~~--st~RVLtME~~~G~~i~D 291 (538)
T KOG1235|consen 214 VLQKFFPDFDLVWLVDEIAKSLPQELDFTKEAKNAERFRENFKDFSLLTYVLVPKVYWDL--STKRVLTMEYVDGIKIND 291 (538)
T ss_pred HHHHhCcCCchhhHHHHHHhhhHhhcchHHHHHhHHHHHHHHHhcccccceeCCeehhhc--CcceEEEEEecCCccCCC
Confidence 0 1245555544443 3444 33333222 245689999999987765
Q ss_pred Hh--ccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecC----CCceEEeeccCCCCCCCc
Q 045127 325 WL--SESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTD----NLEPLISRFKIEYQHRST 388 (508)
Q Consensus 325 ~l--~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~----~~~~kl~Dfg~~~~~~~~ 388 (508)
.- .+..++...+..-+.++.. .-+=.. |++|+|=+|.||+++. ++.+.+-|||+....+.+
T Consensus 292 l~~i~~~gi~~~~i~~~l~~~~~--~qIf~~-GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~~ 358 (538)
T KOG1235|consen 292 LDAIDKRGISPHDILNKLVEAYL--EQIFKT-GFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISHK 358 (538)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHH--HHHHhc-CCccCCCCCCcEEEecCCCCCccEEEEcccccccccHH
Confidence 53 3667776654443333222 222334 9999999999999983 678999999997666543
|
|
| >KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=98.44 E-value=2.8e-08 Score=100.62 Aligned_cols=98 Identities=22% Similarity=0.355 Sum_probs=84.9
Q ss_pred CCCCcccCCCccccCCCCCcCeEeCccCcccccCCccc------cEEEcccCcccCCCChhhhccCCccccccccccccC
Q 045127 58 KNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCPLGI------MSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSG 131 (508)
Q Consensus 58 ~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~l------~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g 131 (508)
..+|+++.+|. +++.+..|..||.+.|.+.. +|..+ +.|.+..|++. .+|.++.. -.|..||+|+|+++
T Consensus 150 ~sNNkl~~lp~-~ig~~~tl~~ld~s~nei~s-lpsql~~l~slr~l~vrRn~l~-~lp~El~~-LpLi~lDfScNkis- 224 (722)
T KOG0532|consen 150 VSNNKLTSLPE-EIGLLPTLAHLDVSKNEIQS-LPSQLGYLTSLRDLNVRRNHLE-DLPEELCS-LPLIRLDFSCNKIS- 224 (722)
T ss_pred EecCccccCCc-ccccchhHHHhhhhhhhhhh-chHHhhhHHHHHHHHHhhhhhh-hCCHHHhC-CceeeeecccCcee-
Confidence 34578999998 99988999999999999976 56444 78999999998 67888884 46999999999999
Q ss_pred cCCchhhhcCCccceeccccccccCcccccc
Q 045127 132 DIPVESFSVLANLTFLNLSYNHFSEMKVSDT 162 (508)
Q Consensus 132 ~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~ 162 (508)
.|| -.|..|+.|++|.|.+|.|+. +|...
T Consensus 225 ~iP-v~fr~m~~Lq~l~LenNPLqS-PPAqI 253 (722)
T KOG0532|consen 225 YLP-VDFRKMRHLQVLQLENNPLQS-PPAQI 253 (722)
T ss_pred ecc-hhhhhhhhheeeeeccCCCCC-ChHHH
Confidence 999 889999999999999999998 66554
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=98.40 E-value=4.4e-08 Score=105.89 Aligned_cols=176 Identities=15% Similarity=0.202 Sum_probs=119.8
Q ss_pred hhcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCC--CCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEE
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGD--VSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAI 312 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 312 (508)
..+++.+.+-+.+|.++.++.+.-. .|...+.|+.... ......+....+-.+.-..++|-++....-+......++
T Consensus 802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L 881 (1205)
T KOG0606|consen 802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPL 881 (1205)
T ss_pred CCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcch
Confidence 4456777778889999998877632 2333333333110 000011112222222222334555554444444567799
Q ss_pred EEeecCCCCHHHHhccC-CCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC---------
Q 045127 313 VTEWTNGGNVELWLSES-APSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE--------- 382 (508)
Q Consensus 313 v~e~~~~gsL~~~l~~~-~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~--------- 382 (508)
+++|+.+++|...++.. ..+.+........+..+++|||.. .+.|+|++|.|+++..++..++.|||..
T Consensus 882 ~~~~~~~~~~~Skl~~~~~~saepaRs~i~~~vqs~e~L~s~-~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p~ 960 (1205)
T KOG0606|consen 882 VGHYLNGGDLPSKLHNSGCLSAEPARSPILERVQSLESLHSS-LRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPPT 960 (1205)
T ss_pred hhHHhccCCchhhhhcCCCcccccccchhHHHHhhhhccccc-hhhcccccccchhhcccCCcccCccccccccccccCc
Confidence 99999999999998843 355555666777888999999999 8999999999999999999999999520
Q ss_pred -------------------------------------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccc
Q 045127 383 -------------------------------------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFE 412 (508)
Q Consensus 383 -------------------------------------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~ 412 (508)
......+|.|++|++++|.++|..||....
T Consensus 961 ~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~t 1039 (1205)
T KOG0606|consen 961 TDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAET 1039 (1205)
T ss_pred CCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCcc
Confidence 112245799999999999999999997543
|
|
| >COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.40 E-value=1.2e-05 Score=79.36 Aligned_cols=238 Identities=11% Similarity=0.119 Sum_probs=139.1
Q ss_pred CCCceeeecCCeEEEEEEECCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhc-CCCCccceeeE------Eec-CCeeEE
Q 045127 241 SKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQF-QHKNLIRVLGW------NNS-RRTRAI 312 (508)
Q Consensus 241 ~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~------~~~-~~~~~l 312 (508)
...+.||+|+.+.+|..--- + .-+-|+++..... ... +.+..|... .||-+-.-+.| ..+ +....+
T Consensus 14 ~~gr~LgqGgea~ly~l~e~-~-d~VAKIYh~Pppa-~~a---qk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGf 87 (637)
T COG4248 14 PPGRPLGQGGEADLYTLGEV-R-DQVAKIYHAPPPA-AQA---QKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGF 87 (637)
T ss_pred CCCccccCCccceeeecchh-h-chhheeecCCCch-HHH---HHHHHhccCCCCcchhhhhcccHHHhhCCCccceeEE
Confidence 35688999999999965321 1 2245776543322 111 122333333 45544331221 111 222567
Q ss_pred EEeecCCC-CHHHHhc-------cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeec-----
Q 045127 313 VTEWTNGG-NVELWLS-------ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRF----- 379 (508)
Q Consensus 313 v~e~~~~g-sL~~~l~-------~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Df----- 379 (508)
.|..+.+. ....+.. .....|+-.++.+..++.+.+-||.. |.+-||+.++|+|+.+++.+.+.|-
T Consensus 88 lmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~-Gh~vGDVn~~~~lVsd~~~V~LVdsDsfqi 166 (637)
T COG4248 88 LMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEH-GHVVGDVNQNSFLVSDDSKVVLVDSDSFQI 166 (637)
T ss_pred ecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhc-CCcccccCccceeeecCceEEEEcccceee
Confidence 77776653 2222222 34568999999999999999999999 9999999999999999999988864
Q ss_pred -----------cC---------------CCCCCCcchhhHHHHHHHHHHhC-CCCCcccccCc---ccHHHHH-HHhcc-
Q 045127 380 -----------KI---------------EYQHRSTKYVYKFGLFLLEMITN-RRPLEEFERGE---AGFIEYI-RMHYP- 427 (508)
Q Consensus 380 -----------g~---------------~~~~~~~~Dv~SlGvil~elltg-~~P~~~~~~~~---~~~~~~~-~~~~~- 427 (508)
|. +...+...|-|.+|+++++++.| +.||.+..... ......+ ...+.
T Consensus 167 ~~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g~f~y 246 (637)
T COG4248 167 NANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHGRFAY 246 (637)
T ss_pred ccCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcceeee
Confidence 11 12335678999999999999886 99998653111 0111000 00000
Q ss_pred -chhhhhhhhcccCCcchHHHHHHHHHHHHhcCCC--CCCCCCCHHHHHHHHHHHHhhCCCC
Q 045127 428 -ENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQ--PTGKLPSLVQIYNMITRAYKSCPIL 486 (508)
Q Consensus 428 -~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~--dP~~RPs~~evl~~L~~i~~~~~~~ 486 (508)
.+-..-..+... .....--...+..+..+|+.. .+.-|||++.-+..|..+.++....
T Consensus 247 a~~~~~g~~p~P~-~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~~L~~C 307 (637)
T COG4248 247 ASDQRRGLKPPPR-SIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQQLKKC 307 (637)
T ss_pred chhccCCCCCCCC-CCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHhhhhh
Confidence 000000000000 000001122344455677754 3678999999999988887765443
|
|
| >PLN03210 Resistant to P | Back alignment and domain information |
|---|
Probab=98.37 E-value=1e-06 Score=102.41 Aligned_cols=111 Identities=20% Similarity=0.217 Sum_probs=64.2
Q ss_pred cccCCCccccCCCCCcCeEeCccCcccccCC---ccccEEEcccCcccCCCChhh-------------------------
Q 045127 62 CVESFPKIDLRSRPKITPLYLSFNFFWKYCP---LGIMSIDLSNNSLKGAFPIDV------------------------- 113 (508)
Q Consensus 62 ~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p---~~l~~L~Ls~N~l~~~~p~~~------------------------- 113 (508)
.++.+|. .+ ++++|+.|+|++|...+.+| ..+++|+|++|.++ .+|..+
T Consensus 693 ~L~~Lp~-~i-~l~sL~~L~Lsgc~~L~~~p~~~~nL~~L~L~~n~i~-~lP~~~~l~~L~~L~l~~~~~~~l~~~~~~l 769 (1153)
T PLN03210 693 NLEILPT-GI-NLKSLYRLNLSGCSRLKSFPDISTNISWLDLDETAIE-EFPSNLRLENLDELILCEMKSEKLWERVQPL 769 (1153)
T ss_pred CcCccCC-cC-CCCCCCEEeCCCCCCccccccccCCcCeeecCCCccc-cccccccccccccccccccchhhcccccccc
Confidence 3444554 22 45555555555554333333 34466777777765 444332
Q ss_pred -----hccCCccccccccccccCcCCchhhhcCCccceecccccc-ccCccccccccccccCCCCccCCCC
Q 045127 114 -----LLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNH-FSEMKVSDTKFFQRFNSSSFLHSGL 178 (508)
Q Consensus 114 -----~~l~~L~~L~l~~N~l~g~lp~~~~~~l~~L~~l~l~~N~-l~~~~~~~~~~l~~l~~~~~~~n~~ 178 (508)
...++|+.|+|++|...+.+| ..++++++|+.|++++|. +.. .| ....+++|..+.+.++..
T Consensus 770 ~~~~~~~~~sL~~L~Ls~n~~l~~lP-~si~~L~~L~~L~Ls~C~~L~~-LP-~~~~L~sL~~L~Ls~c~~ 837 (1153)
T PLN03210 770 TPLMTMLSPSLTRLFLSDIPSLVELP-SSIQNLHKLEHLEIENCINLET-LP-TGINLESLESLDLSGCSR 837 (1153)
T ss_pred chhhhhccccchheeCCCCCCccccC-hhhhCCCCCCEEECCCCCCcCe-eC-CCCCccccCEEECCCCCc
Confidence 112466777777777666788 677888888888888754 444 33 333566676666666543
|
syringae 6; Provisional |
| >cd05150 APH Aminoglycoside 3'-phosphotransferase (APH) | Back alignment and domain information |
|---|
Probab=98.37 E-value=4.4e-06 Score=79.88 Aligned_cols=149 Identities=11% Similarity=0.021 Sum_probs=92.4
Q ss_pred eeeecCC-eEEEEEEECCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcC-CCCccceeeEEecCCeeEEEEeecCCCCH
Q 045127 245 LVGKNEG-AAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQ-HKNLIRVLGWNNSRRTRAIVTEWTNGGNV 322 (508)
Q Consensus 245 ~lg~G~~-g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~gsL 322 (508)
.|..|.+ ..||+.... +..+++|+..... .....+|+++++.+. +--+.+++++....+..++|||+++|.++
T Consensus 5 ~~~~g~~~~~v~~~~~~-~~~~~vk~~~~~~----~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l 79 (244)
T cd05150 5 RVTEGQSGATVYRLDGK-NPGLYLKIAPSGP----TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPA 79 (244)
T ss_pred ecCCCCCcCeEEEEcCC-CCcEEEEecCCCc----ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccH
Confidence 3445555 788998764 4788888885432 235667888888874 44466778877766677999999999877
Q ss_pred HHHh---------c----------cC-----CCC--HHHHHHHHH--------------------HHHHHHHHHhhC---
Q 045127 323 ELWL---------S----------ES-----APS--WKHRLKVLI--------------------GVVEAMCYLQEQ--- 353 (508)
Q Consensus 323 ~~~l---------~----------~~-----~l~--~~~~~~i~~--------------------~i~~~L~~LH~~--- 353 (508)
.... . .. ... ......... .+...+..|-..
T Consensus 80 ~~~~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 159 (244)
T cd05150 80 AALWEELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAELEATRPA 159 (244)
T ss_pred hHhhcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHHhhCCC
Confidence 6432 0 10 010 000000000 011112222111
Q ss_pred ---CCccccCCCCCCEEecCCCceEEeeccCCCCCCCcchhhHHHHHHHHH
Q 045127 354 ---WPEVDYDLRTGSVLLTDNLEPLISRFKIEYQHRSTKYVYKFGLFLLEM 401 (508)
Q Consensus 354 ---~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~Dv~SlGvil~el 401 (508)
..++|+|+.|.||+++++....|+||+.+....+..| |+.++..+
T Consensus 160 ~~~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~~gdp~~D---la~~~~~~ 207 (244)
T cd05150 160 EEDLVVTHGDACLPNIIVDPGKFSGFIDLGRLGVADRYQD---LALAVRSL 207 (244)
T ss_pred cCceEEECCCCCCccEEEeCCcEEEEEEccccccccHHHH---HHHHHHHh
Confidence 1579999999999999987788999998877766666 44444433
|
The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio |
| >PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP | Back alignment and domain information |
|---|
Probab=98.35 E-value=1.1e-05 Score=73.99 Aligned_cols=132 Identities=16% Similarity=0.183 Sum_probs=96.3
Q ss_pred CCCceeeecCCeEEEEEEECCCCEEEEEEecCCC---------------CHHHHHHHHHHHHHHhhcC------CCCccc
Q 045127 241 SKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDV---------------SREIRDEFVEECKLLVQFQ------HKNLIR 299 (508)
Q Consensus 241 ~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~---------------~~~~~~~~~~E~~~l~~l~------h~niv~ 299 (508)
+....||+|+.-.||. +++....+||+..... ......+..+|+.-...+. +.+|.+
T Consensus 4 ~~~~~i~~G~~R~cy~--HP~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r 81 (199)
T PF10707_consen 4 SESDLIAQGGERDCYQ--HPDDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPR 81 (199)
T ss_pred CCCcccccCCCceEEE--CCCCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCccccccc
Confidence 3457899999999994 5667778999987554 0112455666776655554 889999
Q ss_pred eeeEEecCCeeEEEEeecCC------CCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCC--
Q 045127 300 VLGWNNSRRTRAIVTEWTNG------GNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDN-- 371 (508)
Q Consensus 300 ~~~~~~~~~~~~lv~e~~~~------gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~-- 371 (508)
++|+.+++....+|+|.+.+ .+|.+++....++. .. ...+-+-.+||-+. .|+.+|++|+||++...
T Consensus 82 ~~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~~~~~-~~---~~~L~~f~~~l~~~-~Iv~~dl~~~NIv~~~~~~ 156 (199)
T PF10707_consen 82 FYGFVETNLGLGLVVELIRDADGNISPTLEDYLKEGGLTE-EL---RQALDEFKRYLLDH-HIVIRDLNPHNIVVQRRDS 156 (199)
T ss_pred EeEEEecCCceEEEEEEEECCCCCcCccHHHHHHcCCccH-HH---HHHHHHHHHHHHHc-CCeecCCCcccEEEEecCC
Confidence 99999999989999998643 37888887777766 32 23333455788888 99999999999999732
Q ss_pred C--ceEEeec
Q 045127 372 L--EPLISRF 379 (508)
Q Consensus 372 ~--~~kl~Df 379 (508)
+ .+.|+|-
T Consensus 157 ~~~~lvlIDG 166 (199)
T PF10707_consen 157 GEFRLVLIDG 166 (199)
T ss_pred CceEEEEEeC
Confidence 2 4667763
|
PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner []. |
| >COG4886 Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.32 E-value=4.4e-07 Score=93.29 Aligned_cols=101 Identities=33% Similarity=0.451 Sum_probs=60.8
Q ss_pred cccccCCCCCcccCCCccccCCCCCcCeEeCccCcccccCC-----ccccEEEcccCcccCCCChhhhccCCcccccccc
Q 045127 52 HLCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCP-----LGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSY 126 (508)
Q Consensus 52 ~l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p-----~~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~ 126 (508)
.+..|+...|.+..+|. .++.+++|+.|++++|+++...+ ..++.|++++|+++ .+|.....+..|++|++++
T Consensus 141 nL~~L~l~~N~i~~l~~-~~~~l~~L~~L~l~~N~l~~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~ 218 (394)
T COG4886 141 NLKELDLSDNKIESLPS-PLRNLPNLKNLDLSFNDLSDLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSN 218 (394)
T ss_pred hcccccccccchhhhhh-hhhccccccccccCCchhhhhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcC
Confidence 45566666677777765 67777778888888877764322 33477777777777 5666555555666666666
Q ss_pred ccccCcCCchhhhcCCccceeccccccccC
Q 045127 127 NQLSGDIPVESFSVLANLTFLNLSYNHFSE 156 (508)
Q Consensus 127 N~l~g~lp~~~~~~l~~L~~l~l~~N~l~~ 156 (508)
|.+. .++ ..+..+.++..|.+++|++..
T Consensus 219 N~~~-~~~-~~~~~~~~l~~l~l~~n~~~~ 246 (394)
T COG4886 219 NSII-ELL-SSLSNLKNLSGLELSNNKLED 246 (394)
T ss_pred Ccce-ecc-hhhhhcccccccccCCceeee
Confidence 6433 233 334444444444444444443
|
|
| >COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.30 E-value=1.5e-05 Score=70.13 Aligned_cols=138 Identities=18% Similarity=0.238 Sum_probs=95.1
Q ss_pred CCCceeeecCCeEEEEEEECCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCcc-ceeeEEecCCeeEEEEeecCC
Q 045127 241 SKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLI-RVLGWNNSRRTRAIVTEWTNG 319 (508)
Q Consensus 241 ~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv-~~~~~~~~~~~~~lv~e~~~~ 319 (508)
+..+.|++|.+|.||.|.|. |..+|+|+-+.+.. +..+..|++++..+...++. +++.|..+ ++.|||+.|
T Consensus 25 ~v~~~L~KG~~s~Vyl~~~~-~~~~a~Kvrr~ds~---r~~l~kEakiLeil~g~~~~p~vy~yg~~----~i~me~i~G 96 (201)
T COG2112 25 RVEKELAKGTTSVVYLGEWR-GGEVALKVRRRDSP---RRNLEKEAKILEILAGEGVTPEVYFYGED----FIRMEYIDG 96 (201)
T ss_pred hhhhhhhcccccEEEEeecc-CceEEEEEecCCcc---hhhHHHHHHHHHHhhhcCCCceEEEechh----hhhhhhhcC
Confidence 45578999999999999996 55889998865543 57889999999999866654 34444332 466999999
Q ss_pred CCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCC-CCCEEecCCCceEEeeccCCCCCCCcchhhH
Q 045127 320 GNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLR-TGSVLLTDNLEPLISRFKIEYQHRSTKYVYK 393 (508)
Q Consensus 320 gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlk-p~NIll~~~~~~kl~Dfg~~~~~~~~~Dv~S 393 (508)
..|.+.-... +.... ..+++.---|-.. ||-|+.+. |..+++..+..+.|+||-.+..-.....+=+
T Consensus 97 ~~L~~~~~~~--~rk~l----~~vlE~a~~LD~~-GI~H~El~~~~k~vlv~~~~~~iIDFd~At~k~~p~N~Tq 164 (201)
T COG2112 97 RPLGKLEIGG--DRKHL----LRVLEKAYKLDRL-GIEHGELSRPWKNVLVNDRDVYIIDFDSATFKKKPRNVTQ 164 (201)
T ss_pred cchhhhhhcc--cHHHH----HHHHHHHHHHHHh-ccchhhhcCCceeEEecCCcEEEEEccchhhccCCchHHH
Confidence 8888765422 33333 3444553334445 99999997 5555555566999999988764433444433
|
|
| >PLN02876 acyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=98.26 E-value=8.9e-06 Score=91.28 Aligned_cols=149 Identities=13% Similarity=0.104 Sum_probs=95.2
Q ss_pred CceeeecCCeEEEEEEECCC---CEEEEEEecCCCCHHHHHHHHHHHHHHhhcC-CCCc--cceeeEEecC---CeeEEE
Q 045127 243 KNLVGKNEGAAIYKGILRDG---TRVKIEIYKGDVSREIRDEFVEECKLLVQFQ-HKNL--IRVLGWNNSR---RTRAIV 313 (508)
Q Consensus 243 ~~~lg~G~~g~V~~~~~~~~---~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~ni--v~~~~~~~~~---~~~~lv 313 (508)
.+.++.|.++.+|+....++ ..+++|+............+.+|+++++.+. |.++ .+++.++.+. +..|+|
T Consensus 43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flV 122 (822)
T PLN02876 43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYI 122 (822)
T ss_pred EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEE
Confidence 57789999999999887553 4677777643322223457889999999995 6664 7778877654 357899
Q ss_pred EeecCCCCHHH--------------------Hh---cc---C--CC-------CH--HHHHHHHH---------------
Q 045127 314 TEWTNGGNVEL--------------------WL---SE---S--AP-------SW--KHRLKVLI--------------- 341 (508)
Q Consensus 314 ~e~~~~gsL~~--------------------~l---~~---~--~l-------~~--~~~~~i~~--------------- 341 (508)
|||++|..+.+ .+ +. . .+ .+ .++..|..
T Consensus 123 ME~v~G~~~~~~~~~~~~~~~r~~l~~~l~~~La~LH~vd~~~~gl~~~g~~~~~~~~~l~~w~~~~~~~~~~~~~~~~~ 202 (822)
T PLN02876 123 MEYLEGRIFVDPKLPGVAPERRRAIYRATAKVLAALHSADVDAIGLGKYGRRDNYCKRQVERWAKQYLASTGEGKPPRNP 202 (822)
T ss_pred EEecCCcccCCccCCCCCHHHHHHHHHHHHHHHHHHhCCCchhcChhhcCCCCchHHHHHHHHHHHHHHhhcccCCCCCh
Confidence 99998864321 11 11 0 00 00 11212111
Q ss_pred HHHHHHHHHhhCC----------CccccCCCCCCEEecCC-C-ceEEeeccCCCCCCCcchh
Q 045127 342 GVVEAMCYLQEQW----------PEVDYDLRTGSVLLTDN-L-EPLISRFKIEYQHRSTKYV 391 (508)
Q Consensus 342 ~i~~~L~~LH~~~----------~iiH~Dlkp~NIll~~~-~-~~kl~Dfg~~~~~~~~~Dv 391 (508)
.+.+.+++|..+. .+||+|+++.||+++.+ . .+-|.||.++..-++..|+
T Consensus 203 ~~~~l~~wL~~~~P~~~~~~~~~~LvHGD~~~~Nvl~~~~~~~v~aVLDWE~a~~GdPl~DL 264 (822)
T PLN02876 203 KMLELIDWLRENIPAEDSTGAGTGIVHGDFRIDNLVFHPTEDRVIGILDWELSTLGNQMCDV 264 (822)
T ss_pred hHHHHHHHHHhcCCCccccCCCcceEecCcccccEEEcCCCCeEEEEEeeeccccCChHHHH
Confidence 1223355663322 48999999999999853 3 3578999988777777774
|
|
| >COG4886 Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.25 E-value=7.6e-07 Score=91.56 Aligned_cols=122 Identities=25% Similarity=0.277 Sum_probs=86.7
Q ss_pred cccccCCCCCcccCCCccccCCCC-CcCeEeCccCccccc-----CCccccEEEcccCcccCCCChhhhccCCccccccc
Q 045127 52 HLCNESKNPNCVESFPKIDLRSRP-KITPLYLSFNFFWKY-----CPLGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLS 125 (508)
Q Consensus 52 ~l~~L~~~~n~~~~~p~~~~~~l~-~L~~L~L~~N~l~~~-----~p~~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 125 (508)
.+..|....|.+..+|+ ....++ +|+.|++++|++... .++.++.|++++|+++ .+|...+.+++|+.|+++
T Consensus 117 ~l~~L~l~~n~i~~i~~-~~~~~~~nL~~L~l~~N~i~~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~~L~ls 194 (394)
T COG4886 117 NLTSLDLDNNNITDIPP-LIGLLKSNLKELDLSDNKIESLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLDLS 194 (394)
T ss_pred ceeEEecCCcccccCcc-ccccchhhcccccccccchhhhhhhhhccccccccccCCchhh-hhhhhhhhhhhhhheecc
Confidence 34556666678888887 666664 888888888888753 2356688888888888 666666677888888888
Q ss_pred cccccCcCCchhhhcCCccceeccccccccCccccccccccccCCCCccCCCC
Q 045127 126 YNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLHSGL 178 (508)
Q Consensus 126 ~N~l~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~~~n~~ 178 (508)
+|+++ .+| .....+..|++|.+++|++.. .+.....+.++..+.+.+|..
T Consensus 195 ~N~i~-~l~-~~~~~~~~L~~l~~~~N~~~~-~~~~~~~~~~l~~l~l~~n~~ 244 (394)
T COG4886 195 GNKIS-DLP-PEIELLSALEELDLSNNSIIE-LLSSLSNLKNLSGLELSNNKL 244 (394)
T ss_pred CCccc-cCc-hhhhhhhhhhhhhhcCCccee-cchhhhhcccccccccCCcee
Confidence 88888 888 544555668888888886554 555566666666666666653
|
|
| >KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.24 E-value=6.5e-08 Score=80.69 Aligned_cols=86 Identities=27% Similarity=0.388 Sum_probs=66.5
Q ss_pred cCCCCCcCeEeCccCcccccCC-------ccccEEEcccCcccCCCChhhhccCCccccccccccccCcCCchhhhcCCc
Q 045127 71 LRSRPKITPLYLSFNFFWKYCP-------LGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLAN 143 (508)
Q Consensus 71 ~~~l~~L~~L~L~~N~l~~~~p-------~~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp~~~~~~l~~ 143 (508)
+.....|+..+|++|.+.. .| +.++.|+|++|.|+ .+|.++..++.|+.|+++.|.|. ..| ..+..|.+
T Consensus 49 l~~~~el~~i~ls~N~fk~-fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lNl~~N~l~-~~p-~vi~~L~~ 124 (177)
T KOG4579|consen 49 LSKGYELTKISLSDNGFKK-FPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLNLRFNPLN-AEP-RVIAPLIK 124 (177)
T ss_pred HhCCceEEEEecccchhhh-CCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhcccccCccc-cch-HHHHHHHh
Confidence 3444566777888888864 33 34478888888888 77888888888999999999888 888 77888888
Q ss_pred cceeccccccccCcccc
Q 045127 144 LTFLNLSYNHFSEMKVS 160 (508)
Q Consensus 144 L~~l~l~~N~l~~~~~~ 160 (508)
|..|+..+|.+..++..
T Consensus 125 l~~Lds~~na~~eid~d 141 (177)
T KOG4579|consen 125 LDMLDSPENARAEIDVD 141 (177)
T ss_pred HHHhcCCCCccccCcHH
Confidence 88888888888874433
|
|
| >KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
Probab=98.21 E-value=2.6e-07 Score=86.78 Aligned_cols=100 Identities=23% Similarity=0.246 Sum_probs=81.6
Q ss_pred cccccCCCCCcccCCCccccCCCCCcCeEeCccCcccccCC-----ccccEEEcccCcccCCCChhhhccCCcccccccc
Q 045127 52 HLCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCP-----LGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSY 126 (508)
Q Consensus 52 ~l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p-----~~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~ 126 (508)
.+..|..+.|.+..+.. +..|++|+.||||+|.++...- +.+++|.|+.|.|.. -+.+..|-+|..||+++
T Consensus 308 kir~L~lS~N~i~~v~n--La~L~~L~~LDLS~N~Ls~~~Gwh~KLGNIKtL~La~N~iE~--LSGL~KLYSLvnLDl~~ 383 (490)
T KOG1259|consen 308 KLRRLILSQNRIRTVQN--LAELPQLQLLDLSGNLLAECVGWHLKLGNIKTLKLAQNKIET--LSGLRKLYSLVNLDLSS 383 (490)
T ss_pred ceeEEeccccceeeehh--hhhcccceEeecccchhHhhhhhHhhhcCEeeeehhhhhHhh--hhhhHhhhhheeccccc
Confidence 34556666778888874 9999999999999999875322 467999999999983 25678888999999999
Q ss_pred ccccCcCC-chhhhcCCccceeccccccccC
Q 045127 127 NQLSGDIP-VESFSVLANLTFLNLSYNHFSE 156 (508)
Q Consensus 127 N~l~g~lp-~~~~~~l~~L~~l~l~~N~l~~ 156 (508)
|+|. .+. ...+++|+-|+.|.|.+|.+.+
T Consensus 384 N~Ie-~ldeV~~IG~LPCLE~l~L~~NPl~~ 413 (490)
T KOG1259|consen 384 NQIE-ELDEVNHIGNLPCLETLRLTGNPLAG 413 (490)
T ss_pred cchh-hHHHhcccccccHHHHHhhcCCCccc
Confidence 9998 332 2458899999999999999998
|
|
| >KOG1859 consensus Leucine-rich repeat proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.14 E-value=7.3e-08 Score=100.14 Aligned_cols=117 Identities=26% Similarity=0.261 Sum_probs=88.9
Q ss_pred CCcccCCCccccCCCCCcCeEeCccCcccccC----CccccEEEcccCcccCCCCh-hhhccCCccccccccccccCcCC
Q 045127 60 PNCVESFPKIDLRSRPKITPLYLSFNFFWKYC----PLGIMSIDLSNNSLKGAFPI-DVLLCTQIQALDLSYNQLSGDIP 134 (508)
Q Consensus 60 ~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~----p~~l~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~l~~N~l~g~lp 134 (508)
.|.+..+.. ++.-++.|+.|||++|+++..- -..|++|||++|++. .+|. ...++. |+.|++++|.++ ++-
T Consensus 173 yN~L~~mD~-SLqll~ale~LnLshNk~~~v~~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc~-L~~L~lrnN~l~-tL~ 248 (1096)
T KOG1859|consen 173 YNRLVLMDE-SLQLLPALESLNLSHNKFTKVDNLRRLPKLKHLDLSYNCLR-HVPQLSMVGCK-LQLLNLRNNALT-TLR 248 (1096)
T ss_pred hhhHHhHHH-HHHHHHHhhhhccchhhhhhhHHHHhcccccccccccchhc-cccccchhhhh-heeeeecccHHH-hhh
Confidence 377777776 7888899999999999987532 135699999999998 4453 334555 999999999999 775
Q ss_pred chhhhcCCccceeccccccccCccc-cccccccccCCCCccCCCCCCCCC
Q 045127 135 VESFSVLANLTFLNLSYNHFSEMKV-SDTKFFQRFNSSSFLHSGLFPGHH 183 (508)
Q Consensus 135 ~~~~~~l~~L~~l~l~~N~l~~~~~-~~~~~l~~l~~~~~~~n~~~~c~~ 183 (508)
.+.+|.+|.-||+++|-|.+-.- .-...+..|..+++.|||.. |..
T Consensus 249 --gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~-c~p 295 (1096)
T KOG1859|consen 249 --GIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC-CAP 295 (1096)
T ss_pred --hHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc-cCH
Confidence 57899999999999999887211 11234678889999999863 443
|
|
| >KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.12 E-value=3.2e-07 Score=76.62 Aligned_cols=99 Identities=23% Similarity=0.337 Sum_probs=79.4
Q ss_pred CcCeEeCccCcccccCC---------ccccEEEcccCcccCCCChhhhcc-CCccccccccccccCcCCchhhhcCCccc
Q 045127 76 KITPLYLSFNFFWKYCP---------LGIMSIDLSNNSLKGAFPIDVLLC-TQIQALDLSYNQLSGDIPVESFSVLANLT 145 (508)
Q Consensus 76 ~L~~L~L~~N~l~~~~p---------~~l~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~l~~N~l~g~lp~~~~~~l~~L~ 145 (508)
.+..|+|+++.|- .++ .++...+|++|.+. .+|..|... +.+++|+|++|+|+ .+| ..++.++.|+
T Consensus 28 E~h~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvP-eE~Aam~aLr 103 (177)
T KOG4579|consen 28 ELHFLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVP-EELAAMPALR 103 (177)
T ss_pred Hhhhcccccchhh-HHHHHHHHHhCCceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hch-HHHhhhHHhh
Confidence 4556777777663 233 24477899999999 778888654 58999999999999 999 7799999999
Q ss_pred eeccccccccCccccccccccccCCCCccCCCCC
Q 045127 146 FLNLSYNHFSEMKVSDTKFFQRFNSSSFLHSGLF 179 (508)
Q Consensus 146 ~l~l~~N~l~~~~~~~~~~l~~l~~~~~~~n~~~ 179 (508)
.|++++|.|.. .+..+..+.+|..+...+|...
T Consensus 104 ~lNl~~N~l~~-~p~vi~~L~~l~~Lds~~na~~ 136 (177)
T KOG4579|consen 104 SLNLRFNPLNA-EPRVIAPLIKLDMLDSPENARA 136 (177)
T ss_pred hcccccCcccc-chHHHHHHHhHHHhcCCCCccc
Confidence 99999999998 6666666888888887777543
|
|
| >cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members | Back alignment and domain information |
|---|
Probab=98.11 E-value=1.8e-05 Score=75.15 Aligned_cols=142 Identities=14% Similarity=0.099 Sum_probs=82.7
Q ss_pred ceeeecCCe-EEEEEEECCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCC---CccceeeEEecC---CeeEEEEee
Q 045127 244 NLVGKNEGA-AIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHK---NLIRVLGWNNSR---RTRAIVTEW 316 (508)
Q Consensus 244 ~~lg~G~~g-~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~~~---~~~~lv~e~ 316 (508)
+.++.|+.. .||+. +..+++|..+... ....+.+|.+.+..+... .+.++++..... ...+++|++
T Consensus 3 ~~~~~gG~~n~vy~~----~~~~VlR~~~~~~---~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~~~ 75 (235)
T cd05155 3 EPVDSGGTDNATFRL----GDDMSVRLPSAAG---YAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVYRW 75 (235)
T ss_pred eeccCCCcccceEEc----CCceEEEcCCccc---hHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEEEe
Confidence 567777766 58875 3356778764322 245788999999887532 344455443332 234889999
Q ss_pred cCCCCHHHH---------------h---cc---CC--C-------------CHHHHH--HHH-------HHHHHH-HHHH
Q 045127 317 TNGGNVELW---------------L---SE---SA--P-------------SWKHRL--KVL-------IGVVEA-MCYL 350 (508)
Q Consensus 317 ~~~gsL~~~---------------l---~~---~~--l-------------~~~~~~--~i~-------~~i~~~-L~~L 350 (508)
++|.++.+. + +. .. . .|.... .+. .+.... ++.+
T Consensus 76 i~G~~l~~~~~~~~~~l~~~la~~l~~LH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 155 (235)
T cd05155 76 LEGETATAAALSDPSEFAEDLADFLAALRQIDPSGGPPAGRHNFLRGGDLAVRDAETREAIEALEGVIDVDAARALWEAA 155 (235)
T ss_pred ecCCCCCccccCCHHHHHHHHHHHHHHHhCCCcccCCccCCccccCCCChhHhhHHHHHHHHHcccccChHHHHHHHHHH
Confidence 998776422 1 10 00 0 011000 000 011111 1111
Q ss_pred hhC-----CCccccCCCCCCEEecCCCceEEeeccCCCCCCCcchhh
Q 045127 351 QEQ-----WPEVDYDLRTGSVLLTDNLEPLISRFKIEYQHRSTKYVY 392 (508)
Q Consensus 351 H~~-----~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~Dv~ 392 (508)
... .+++|+|+.|.||+++++...-|+||+.+...++..|+-
T Consensus 156 ~~~~~~~~~~l~HGD~~~~Nvlv~~~~i~giIDw~~a~~gDp~~Dla 202 (235)
T cd05155 156 LRAPWWGPPVWFHGDLAPGNLLVQDGRLSAVIDFGCLGVGDPACDLA 202 (235)
T ss_pred hcccccCCceEEeCCCCCCcEEEECCCEEEEEeCcccCcCChHHHHH
Confidence 111 058999999999999977666799999988888887764
|
The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista |
| >cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily | Back alignment and domain information |
|---|
Probab=98.10 E-value=6.7e-07 Score=88.93 Aligned_cols=62 Identities=23% Similarity=0.399 Sum_probs=28.7
Q ss_pred cccEEEcccCcccCC----CChhhhccCCccccccccccccCc----CCchhhhcCCccceeccccccccC
Q 045127 94 GIMSIDLSNNSLKGA----FPIDVLLCTQIQALDLSYNQLSGD----IPVESFSVLANLTFLNLSYNHFSE 156 (508)
Q Consensus 94 ~l~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~g~----lp~~~~~~l~~L~~l~l~~N~l~~ 156 (508)
.++.|+|++|.+++. ++..+..+++|++|+|++|.+++. ++ ..+..+++|+.|++++|.+++
T Consensus 138 ~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~-~~l~~~~~L~~L~L~~n~i~~ 207 (319)
T cd00116 138 ALEKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALA-EGLKANCNLEVLDLNNNGLTD 207 (319)
T ss_pred CceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHHHHH-HHHHhCCCCCEEeccCCccCh
Confidence 445555555555521 222334444555555555555521 22 223333455555555555543
|
LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1). |
| >PRK10593 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.09 E-value=5.8e-05 Score=74.31 Aligned_cols=78 Identities=14% Similarity=0.068 Sum_probs=57.5
Q ss_pred CCCceeeecCCeEEEEEEECCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCC---CCccceeeEEecC---CeeEEEE
Q 045127 241 SKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQH---KNLIRVLGWNNSR---RTRAIVT 314 (508)
Q Consensus 241 ~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h---~niv~~~~~~~~~---~~~~lv~ 314 (508)
...+.||.|..+.||+....++ .+++|..+... ....+..|.+.++.+.- -.+.++++++..+ +..++||
T Consensus 17 ~~~~~i~~G~~~~vy~~~~~~~-~~~~k~~~~~~---~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVm 92 (297)
T PRK10593 17 SRVECISEQPYAALWALYDSQG-NPMPLMARSFS---TPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLL 92 (297)
T ss_pred heeeecCCccceeEEEEEcCCC-CEEEEEecccc---cchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEE
Confidence 3457899999999999877555 46677754311 13578899999988852 4688888887643 5679999
Q ss_pred eecCCCCH
Q 045127 315 EWTNGGNV 322 (508)
Q Consensus 315 e~~~~gsL 322 (508)
|+++++++
T Consensus 93 E~i~G~~~ 100 (297)
T PRK10593 93 ERLRGVSV 100 (297)
T ss_pred eccCCEec
Confidence 99998764
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 508 | ||||
| 3tl8_A | 349 | The Avrptob-Bak1 Complex Reveals Two Structurally S | 1e-13 | ||
| 3uim_A | 326 | Structural Basis For The Impact Of Phosphorylation | 2e-12 | ||
| 2qkw_B | 321 | Structural Basis For Activation Of Plant Immunity B | 3e-10 | ||
| 3hgk_A | 327 | Crystal Structure Of Effect Protein Avrptob Complex | 3e-10 | ||
| 2oib_A | 301 | Crystal Structure Of Irak4 Kinase Domain Apo Form L | 4e-10 | ||
| 2nru_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 4e-10 | ||
| 2nry_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 4e-10 | ||
| 2o8y_A | 298 | Apo Irak4 Kinase Domain Length = 298 | 1e-09 | ||
| 1mqb_A | 333 | Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro | 2e-07 | ||
| 2vwu_A | 302 | Ephb4 Kinase Domain Inhibitor Complex Length = 302 | 6e-06 | ||
| 4aw5_A | 291 | Complex Of The Ephb4 Kinase Domain With An Oxindole | 7e-06 | ||
| 2qol_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596:y | 1e-05 | ||
| 2qok_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 1e-05 | ||
| 2qoi_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 1e-05 | ||
| 2qoo_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 1e-05 | ||
| 2qof_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f | 1e-05 | ||
| 3bkb_A | 377 | Crystal Structure Of Human Feline Sarcoma Viral Onc | 1e-05 | ||
| 3kul_B | 325 | Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep | 2e-05 | ||
| 3kul_A | 325 | Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep | 2e-05 | ||
| 2qon_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 2e-05 | ||
| 2qod_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y602f | 2e-05 | ||
| 2gsf_A | 373 | The Human Epha3 Receptor Tyrosine Kinase And Juxtam | 3e-05 | ||
| 3fxx_A | 371 | Human Epha3 Kinase And Juxtamembrane Region Bound T | 3e-05 | ||
| 3dzq_A | 361 | Human Epha3 Kinase Domain In Complex With Inhibitor | 5e-05 | ||
| 2qoc_A | 344 | Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp | 6e-05 | ||
| 2qo7_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Dephos | 1e-04 | ||
| 3cd3_A | 377 | Crystal Structure Of Phosphorylated Human Feline Sa | 1e-04 | ||
| 2qob_A | 344 | Human Epha3 Kinase Domain, Base Structure Length = | 2e-04 | ||
| 2z7x_A | 549 | Crystal Structure Of The Tlr1-Tlr2 Heterodimer Indu | 2e-04 | ||
| 2z80_A | 353 | Crystal Structure Of The Tlr1-Tlr2 Heterodimer Indu | 3e-04 | ||
| 1jpa_A | 312 | Crystal Structure Of Unphosphorylated Ephb2 Recepto | 3e-04 | ||
| 3riz_A | 772 | Crystal Structure Of The Plant Steroid Receptor Bri | 4e-04 | ||
| 3rgx_A | 768 | Structural Insight Into Brassinosteroid Perception | 4e-04 | ||
| 4f1m_A | 287 | Crystal Structure Of The G1179s Roco4 Kinase Domain | 4e-04 | ||
| 2r2p_A | 295 | Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep | 6e-04 | ||
| 4f0f_A | 287 | Crystal Structure Of The Roco4 Kinase Domain Bound | 6e-04 | ||
| 2hel_A | 306 | Crystal Structure Of A Mutant Epha4 Kinase Domain ( | 8e-04 | ||
| 4f1o_A | 287 | Crystal Structure Of The L1180t Mutant Roco4 Kinase | 9e-04 |
| >pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349 | Back alignment and structure |
|
| >pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326 | Back alignment and structure |
|
| >pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321 | Back alignment and structure |
|
| >pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327 | Back alignment and structure |
|
| >pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301 | Back alignment and structure |
|
| >pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333 | Back alignment and structure |
|
| >pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302 | Back alignment and structure |
|
| >pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291 | Back alignment and structure |
|
| >pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377 | Back alignment and structure |
|
| >pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325 | Back alignment and structure |
|
| >pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325 | Back alignment and structure |
|
| >pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373 | Back alignment and structure |
|
| >pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371 | Back alignment and structure |
|
| >pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361 | Back alignment and structure |
|
| >pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344 | Back alignment and structure |
|
| >pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373 | Back alignment and structure |
|
| >pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377 | Back alignment and structure |
|
| >pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344 | Back alignment and structure |
|
| >pdb|2Z7X|A Chain A, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By Binding Of A Tri-Acylated Lipopeptide Length = 549 | Back alignment and structure |
|
| >pdb|2Z80|A Chain A, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By Binding Of A Tri-Acylated Lipopeptide Length = 353 | Back alignment and structure |
|
| >pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312 | Back alignment and structure |
|
| >pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1 Ectodomain Length = 772 | Back alignment and structure |
|
| >pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1 Length = 768 | Back alignment and structure |
|
| >pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295 | Back alignment and structure |
|
| >pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306 | Back alignment and structure |
|
| >pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326 | Back alignment and structure |
|---|
Score = 118 bits (297), Expect = 8e-30
Identities = 65/293 (22%), Positives = 135/293 (46%), Gaps = 48/293 (16%)
Query: 226 HKFTTWMLKAATNGFSKKNLVGKNEGA--AIYKGILRDGTRVKIEIYKGDVSREIRDEFV 283
+F+ L+ A++ FS KN++G G +YKG L DGT V ++ K + ++ +F
Sbjct: 18 KRFSLRELQVASDNFSNKNILG--RGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQ 75
Query: 284 EECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWTNGGNVELWLSESAPS-----WKHRLK 338
E +++ H+NL+R+ G+ + R +V + G+V L E S W R +
Sbjct: 76 TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQR 135
Query: 339 VLIGVVEAMCYLQEQW-PEVDY-DLRTGSVLLTDNLEPLISRF---KI---EYQHRSTK- 389
+ +G + YL + P++ + D++ ++LL + E ++ F K+ + H +T
Sbjct: 136 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAV 195
Query: 390 ----------Y-----------VYKFGLFLLEMITNRRPLE---EFERGEAGFIEYIR-M 424
Y V+ +G+ LLE+IT +R + + +++++ +
Sbjct: 196 RGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGL 255
Query: 425 HYPENLQLVVDERMMLTENMFD--QAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475
+ L+ +VD + + + + EQ + + L+CT + P + ++ M
Sbjct: 256 LKEKKLEALVDVDL---QGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRM 305
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321 | Back alignment and structure |
|---|
Score = 110 bits (277), Expect = 4e-27
Identities = 64/287 (22%), Positives = 123/287 (42%), Gaps = 45/287 (15%)
Query: 225 NHKFTTWMLKAATNGFSKKNLVGKNEGA--AIYKGILRDGTRVKIEIYKGDVSREIRDEF 282
+++ L+ ATN F K L+G G +YKG+LRDG +V ++ + S + +EF
Sbjct: 26 SYRVPLVDLEEATNNFDHKFLIG--HGVFGKVYKGVLRDGAKVALKRRTPE-SSQGIEEF 82
Query: 283 VEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWTNGGNVELWLSESAP-----SWKHRL 337
E + L +H +L+ ++G+ + R ++ ++ GN++ L S SW+ RL
Sbjct: 83 ETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRL 142
Query: 338 KVLIGVVEAMCYLQEQWPEVDY-DLRTGSVLLTDNLEPLISRF-------KIEYQHRSTK 389
++ IG + YL + + D+++ ++LL +N P I+ F +++ H ST
Sbjct: 143 EICIGAARGLHYLHT--RAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLSTV 200
Query: 390 ------Y----------------VYKFGLFLLEMITNRRPLEE-FERGEAGFIEYIRMHY 426
Y VY FG+ L E++ R + + R E+ +
Sbjct: 201 VKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESH 260
Query: 427 PE-NLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQI 472
L+ +VD + + + + C + PS+ +
Sbjct: 261 NNGQLEQIVDPNLADKIRP-ESLRKFGDTAVKCLALSSEDRPSMGDV 306
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307 | Back alignment and structure |
|---|
Score = 102 bits (257), Expect = 2e-24
Identities = 59/281 (20%), Positives = 116/281 (41%), Gaps = 52/281 (18%)
Query: 224 RNHKFTTWMLKAATNGFSKK------NLVGKNEGA--AIYKGILRDGTRV---KIEIYKG 272
R H F+ + LK TN F ++ N +G EG +YKG + + T V K+
Sbjct: 11 RFHSFSFYELKNVTNNFDERPISVGGNKMG--EGGFGVVYKGYV-NNTTVAVKKLAAMVD 67
Query: 273 DVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWTNGGNVELWL---SES 329
+ E++ +F +E K++ + QH+NL+ +LG+++ +V + G++ L +
Sbjct: 68 ITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT 127
Query: 330 AP-SWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRF---KI---- 381
P SW R K+ G + +L E + D+++ ++LL + IS F +
Sbjct: 128 PPLSWHMRCKIAQGAANGINFLHEN-HHIHRDIKSANILLDEAFTAKISDFGLARASEKF 186
Query: 382 EYQHRSTK------Y---------------VYKFGLFLLEMITNRRPLEEFERGEAGFIE 420
+++ Y +Y FG+ LLE+IT + + R ++
Sbjct: 187 AQTVMTSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAV-DEHREPQLLLD 245
Query: 421 YIRMHYPE--NLQLVVDERMMLTENMFDQAEQGLGLGLMCT 459
E ++ +D++ + + E + C
Sbjct: 246 IKEEIEDEEKTIEDYIDKK--MNDADSTSVEAMYSVASQCL 284
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 80.7 bits (200), Expect = 3e-16
Identities = 35/188 (18%), Positives = 59/188 (31%), Gaps = 32/188 (17%)
Query: 15 FNSTIMNNCIHNPSLKYCNSSSPMDLNEIFKSTIVASHLCNESKNPNCVESFPKIDLRSR 74
FN TI N + I + C+ + N + L
Sbjct: 550 FNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGM--KKECHGAGNLLEFQGIRSEQLNRL 607
Query: 75 PKITPLYLSFNFFWKYCPLGI------MSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQ 128
P ++ + + M +D+S N L G P ++ + L+L +N
Sbjct: 608 STRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHND 667
Query: 129 LSGDIPVESFSVLANLTFLNLSYNHFS--------------EMKVS---------DTKFF 165
+SG IP + L L L+LS N E+ +S + F
Sbjct: 668 ISGSIP-DEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQF 726
Query: 166 QRFNSSSF 173
+ F + F
Sbjct: 727 ETFPPAKF 734
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 74.6 bits (184), Expect = 3e-14
Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 9/89 (10%)
Query: 75 PKITPLYLSFNFF--------WKYCPLGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSY 126
+ L LS N F + + + L NN G P + C+++ +L LS+
Sbjct: 368 ASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSF 427
Query: 127 NQLSGDIPVESFSVLANLTFLNLSYNHFS 155
N LSG IP S L+ L L L N
Sbjct: 428 NYLSGTIP-SSLGSLSKLRDLKLWLNMLE 455
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 72.6 bits (179), Expect = 1e-13
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Query: 75 PKITPLYLSFNFFWKYCPLGIM-------SIDLSNNSLKGAFPIDVLLCTQIQALDLSYN 127
+ L L+ N F P + +DLS N GA P C+ +++L LS N
Sbjct: 269 KSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSN 328
Query: 128 QLSGDIPVESFSVLANLTFLNLSYNHFS 155
SG++P+++ + L L+LS+N FS
Sbjct: 329 NFSGELPMDTLLKMRGLKVLDLSFNEFS 356
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 69.9 bits (172), Expect = 9e-13
Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 7/88 (7%)
Query: 75 PKITPLYLSFNFFWKYCPLGI------MSIDLSNNSLKGAFPIDVLL-CTQIQALDLSYN 127
+T L LS N F+ P S+ LS+N+ G P+D LL ++ LDLS+N
Sbjct: 294 DTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFN 353
Query: 128 QLSGDIPVESFSVLANLTFLNLSYNHFS 155
+ SG++P ++ A+L L+LS N+FS
Sbjct: 354 EFSGELPESLTNLSASLLTLDLSSNNFS 381
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 69.6 bits (171), Expect = 1e-12
Identities = 27/83 (32%), Positives = 37/83 (44%), Gaps = 9/83 (10%)
Query: 80 LYLSFNFF-------WKYCPLGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGD 132
L L N Y + ++ L N L G P + CT + + LS N+L+G+
Sbjct: 447 LKLWLNMLEGEIPQELMYVK-TLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGE 505
Query: 133 IPVESFSVLANLTFLNLSYNHFS 155
IP + L NL L LS N FS
Sbjct: 506 IP-KWIGRLENLAILKLSNNSFS 527
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 69.6 bits (171), Expect = 1e-12
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 6/85 (7%)
Query: 75 PKITPLYLSFNFFWKYCPLGIMS----IDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLS 130
++ L +S N + +D+S+N+ P + C+ +Q LD+S N+LS
Sbjct: 178 GELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIP-FLGDCSALQHLDISGNKLS 236
Query: 131 GDIPVESFSVLANLTFLNLSYNHFS 155
GD + S L LN+S N F
Sbjct: 237 GDFS-RAISTCTELKLLNISSNQFV 260
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 69.2 bits (170), Expect = 1e-12
Identities = 26/92 (28%), Positives = 38/92 (41%), Gaps = 7/92 (7%)
Query: 71 LRSRPKITPLYLSFNFFWKYCP-LGIMS----IDLSNNSLKGAFPIDVLL--CTQIQALD 123
L S + L+LS + + +DLS NSL G L C+ ++ L+
Sbjct: 73 LLSLTGLESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLN 132
Query: 124 LSYNQLSGDIPVESFSVLANLTFLNLSYNHFS 155
+S N L V L +L L+LS N S
Sbjct: 133 VSSNTLDFPGKVSGGLKLNSLEVLDLSANSIS 164
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 68.8 bits (169), Expect = 2e-12
Identities = 25/96 (26%), Positives = 41/96 (42%), Gaps = 9/96 (9%)
Query: 67 PKIDLRSRPKITPLYLSFNFF-------WKYCPLGIMSIDLSNNSLKGAFPIDVLLCTQI 119
P + + + LYL N F C ++S+ LS N L G P + +++
Sbjct: 386 PNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCS-ELVSLHLSFNYLSGTIPSSLGSLSKL 444
Query: 120 QALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFS 155
+ L L N L G+IP + + L L L +N +
Sbjct: 445 RDLKLWLNMLEGEIP-QELMYVKTLETLILDFNDLT 479
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 68.4 bits (168), Expect = 2e-12
Identities = 21/90 (23%), Positives = 34/90 (37%), Gaps = 13/90 (14%)
Query: 75 PKITPLYLSFNFFWKYCPLGIM---------SIDLSNNSLKGAFPIDVLLCTQIQALDLS 125
+ L LS N +G + + +S N + G + C ++ LD+S
Sbjct: 151 NSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDV--SRCVNLEFLDVS 208
Query: 126 YNQLSGDIPVESFSVLANLTFLNLSYNHFS 155
N S IP + L L++S N S
Sbjct: 209 SNNFSTGIP--FLGDCSALQHLDISGNKLS 236
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 67.6 bits (166), Expect = 4e-12
Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 13/99 (13%)
Query: 67 PKIDLRSRPKITPLYLSFNFFWKYCPLGIMS-------IDLSNNSLKGAFPIDVLL---C 116
L S + L +S N + +DLS NS+ GA + +L C
Sbjct: 118 TLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGC 177
Query: 117 TQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFS 155
+++ L +S N++SGD+ S NL FL++S N+FS
Sbjct: 178 GELKHLAISGNKISGDVD---VSRCVNLEFLDVSSNNFS 213
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 67.2 bits (165), Expect = 5e-12
Identities = 23/87 (26%), Positives = 35/87 (40%), Gaps = 8/87 (9%)
Query: 75 PKITPLYLSFNFFWKYCPLGI------MSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQ 128
+ L +S N I +++S+N G P +Q L L+ N+
Sbjct: 223 SALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENK 280
Query: 129 LSGDIPVESFSVLANLTFLNLSYNHFS 155
+G+IP LT L+LS NHF
Sbjct: 281 FTGEIPDFLSGACDTLTGLDLSGNHFY 307
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 62.2 bits (152), Expect = 2e-10
Identities = 26/91 (28%), Positives = 33/91 (36%), Gaps = 11/91 (12%)
Query: 75 PKITPLYLSFNFF--------WKYCPLGIMSIDLSNNSLKGAFPIDVL-LCTQIQALDLS 125
+ L LS N F G+ +DLS N G P + L + LDLS
Sbjct: 318 SLLESLALSSNNFSGELPMDTLLKMR-GLKVLDLSFNEFSGELPESLTNLSASLLTLDLS 376
Query: 126 YNQLSGDIPVE-SFSVLANLTFLNLSYNHFS 155
N SG I + L L L N F+
Sbjct: 377 SNNFSGPILPNLCQNPKNTLQELYLQNNGFT 407
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 57.6 bits (140), Expect = 5e-09
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Query: 97 SIDLSNNSLK---GAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNH 153
SIDLS+ L A +L T +++L LS + ++G + F A+LT L+LS N
Sbjct: 54 SIDLSSKPLNVGFSAVSSSLLSLTGLESLFLSNSHINGSVS--GFKCSASLTSLDLSRNS 111
Query: 154 FS 155
S
Sbjct: 112 LS 113
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 55.3 bits (134), Expect = 3e-08
Identities = 19/83 (22%), Positives = 32/83 (38%)
Query: 98 IDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEM 157
+ LSNNS G P ++ C + LDL+ N +G IP F + ++ + +
Sbjct: 519 LKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYI 578
Query: 158 KVSDTKFFQRFNSSSFLHSGLFP 180
K K + G+
Sbjct: 579 KNDGMKKECHGAGNLLEFQGIRS 601
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 41.0 bits (97), Expect = 8e-04
Identities = 17/98 (17%), Positives = 31/98 (31%), Gaps = 14/98 (14%)
Query: 65 SFPKIDLRSRPKITPLYLSFNFF-------WKYCPLGIMSIDLSNNSLKGAFPIDVLLCT 117
PK + + L LS N F C ++ +DL+ N G P + +
Sbjct: 505 EIPK-WIGRLENLAILKLSNNSFSGNIPAELGDCR-SLIWLDLNTNLFNGTIPAAMFKQS 562
Query: 118 QIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFS 155
++ N ++G V + + N
Sbjct: 563 ----GKIAANFIAGKRYVY-IKNDGMKKECHGAGNLLE 595
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271 | Back alignment and structure |
|---|
Score = 75.7 bits (187), Expect = 1e-15
Identities = 45/211 (21%), Positives = 79/211 (37%), Gaps = 36/211 (17%)
Query: 254 IYKGILRDGTRVKIEIYK-GDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNS--RRTR 310
++KG + G + +++ K D S +F EEC L F H N++ VLG S
Sbjct: 26 LWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHP 84
Query: 311 AIVTEWTNGGNVELWLSESAP---SWKHRLKVLIGVVEAMCYLQEQWPE-VDYDLRTGSV 366
++T W G++ L E +K + + M +L P + L + SV
Sbjct: 85 TLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSV 144
Query: 367 LLTDNLEPLISRF--KIEYQHRSTKY-----------------------VYKFGLFLLEM 401
++ +++ IS K +Q Y ++ F + L E+
Sbjct: 145 MIDEDMTARISMADVKFSFQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWEL 204
Query: 402 ITNRRPLEEFERGEAGF---IEYIRMHYPEN 429
+T P + E G +E +R P
Sbjct: 205 VTREVPFADLSNMEIGMKVALEGLRPTIPPG 235
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 75.6 bits (187), Expect = 3e-15
Identities = 26/106 (24%), Positives = 45/106 (42%), Gaps = 9/106 (8%)
Query: 76 KITPLYLSFNFFWKYCPLGI------MSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQL 129
+ + LS N + I L+ NSL V L + LDL N++
Sbjct: 198 NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLG-KVGLSKNLNGLDLRNNRI 256
Query: 130 SGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLH 175
G +P + + L L LN+S+N+ ++ QRF+ S++ +
Sbjct: 257 YGTLP-QGLTQLKFLHSLNVSFNNLCG-EIPQGGNLQRFDVSAYAN 300
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 70.6 bits (174), Expect = 1e-13
Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 7/84 (8%)
Query: 77 ITPLYLSFNFFWKYCP-----LGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSG 131
T + +S N P L + +DLS N L+G + Q + L+ N L+
Sbjct: 176 FTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAF 235
Query: 132 DIPVESFSVLANLTFLNLSYNHFS 155
D+ + NL L+L N
Sbjct: 236 DLG--KVGLSKNLNGLDLRNNRIY 257
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 64.5 bits (158), Expect = 1e-11
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 97 SIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFS 155
+ +++ ++ GA P + + LD SYN LSG +P S S L NL + N S
Sbjct: 105 YLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLP-PSISSLPNLVGITFDGNRIS 162
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 63.3 bits (155), Expect = 3e-11
Identities = 26/126 (20%), Positives = 48/126 (38%), Gaps = 15/126 (11%)
Query: 44 FKSTIV-ASHLCN-ESKNPNCVESFPKI---DLRSRPKITPLYLSFNFFWKYCPL----- 93
K + + L + C ++ + ++ L LS K P+
Sbjct: 14 IKKDLGNPTTLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLA 73
Query: 94 ---GIMSIDLSN-NSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNL 149
+ + + N+L G P + TQ+ L +++ +SG IP + S + L L+
Sbjct: 74 NLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIP-DFLSQIKTLVTLDF 132
Query: 150 SYNHFS 155
SYN S
Sbjct: 133 SYNALS 138
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 62.6 bits (153), Expect = 6e-11
Identities = 15/58 (25%), Positives = 25/58 (43%)
Query: 98 IDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFS 155
+D S N+L G P + + + N++SG IP S T + +S N +
Sbjct: 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLT 187
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 61.0 bits (149), Expect = 2e-10
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 9/83 (10%)
Query: 80 LYLSFNFFWKYCPLGI------MSIDLSNNSLKGAFPIDVLLCTQ-IQALDLSYNQLSGD 132
L S+N P I + I N + GA P ++ ++ +S N+L+G
Sbjct: 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGK 189
Query: 133 IPVESFSVLANLTFLNLSYNHFS 155
IP +F+ L NL F++LS N
Sbjct: 190 IP-PTFANL-NLAFVDLSRNMLE 210
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 60.2 bits (147), Expect = 4e-10
Identities = 17/78 (21%), Positives = 31/78 (39%), Gaps = 7/78 (8%)
Query: 80 LYLSFNFFWKYCP-----LGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIP 134
++L+ N + +DL NN + G P + + +L++S+N L G+IP
Sbjct: 226 IHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP 285
Query: 135 VESFSVLANLTFLNLSYN 152
L + N
Sbjct: 286 QG--GNLQRFDVSAYANN 301
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322 | Back alignment and structure |
|---|
Score = 75.5 bits (186), Expect = 3e-15
Identities = 43/256 (16%), Positives = 89/256 (34%), Gaps = 52/256 (20%)
Query: 233 LKAATNGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQF 292
L + + + ++K L V ++I+ + ++E+ E L
Sbjct: 19 LYFQSMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDKQSWQNEY--EVYSLPGM 75
Query: 293 QHKNLIRVLGW----NNSRRTRAIVTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMC 348
+H+N+++ +G + ++T + G++ +L + SW + + +
Sbjct: 76 KHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKANVVSWNELCHIAETMARGLA 135
Query: 349 YLQEQWPEVDY---------DLRTGSVLLTDNLEPLISRF-------------------- 379
YL E P + D+++ +VLL +NL I+ F
Sbjct: 136 YLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVG 195
Query: 380 ------------KIEYQHRSTKY--VYKFGLFLLEMITNRRPLE-EFERGEAGFIEYIRM 424
I +Q + +Y GL L E+ + + + F E I
Sbjct: 196 TRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQ 255
Query: 425 HYP-ENLQLVVDERMM 439
H E++Q VV +
Sbjct: 256 HPSLEDMQEVVVHKKK 271
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307 | Back alignment and structure |
|---|
Score = 73.1 bits (180), Expect = 2e-14
Identities = 38/192 (19%), Positives = 72/192 (37%), Gaps = 37/192 (19%)
Query: 252 AAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRA 311
+ K R V I+ + + R F+ E + L + H N++++ G
Sbjct: 22 GVVCKAKWR-AKDVAIKQIESE---SERKAFIVELRQLSRVNHPNIVKLYGA--CLNPVC 75
Query: 312 IVTEWTNGGNVELWLSESAP----SWKHRLKVLIGVVEAMCYLQEQWPE--VDYDLRTGS 365
+V E+ GG++ L + P + H + + + + YL P+ + DL+ +
Sbjct: 76 LVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPN 135
Query: 366 VLLTDNLEPL------ISRFK------------------IEYQHRSTKY-VYKFGLFLLE 400
+LL L + E + S K V+ +G+ L E
Sbjct: 136 LLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWE 195
Query: 401 MITNRRPLEEFE 412
+IT R+P +E
Sbjct: 196 VITRRKPFDEIG 207
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309 | Back alignment and structure |
|---|
Score = 71.6 bits (176), Expect = 6e-14
Identities = 42/214 (19%), Positives = 84/214 (39%), Gaps = 37/214 (17%)
Query: 252 AAIYKGILRDGTRVKI-EIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTR 310
+++ G+ V + + + D E +EF+ E ++ + +H N++ +G
Sbjct: 51 GTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNL 109
Query: 311 AIVTEWTNGGNVELWLSESAP----SWKHRLKVLIGVVEAMCYL-QEQWPEVDYDLRTGS 365
+IVTE+ + G++ L +S + RL + V + M YL P V +L++ +
Sbjct: 110 SIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPN 169
Query: 366 VLLTDNLEPLI-----SRFK---------------------IEYQHRSTKY-VYKFGLFL 398
+L+ + SR K + + + K VY FG+ L
Sbjct: 170 LLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVIL 229
Query: 399 LEMITNRRPLEEFERGEAGF---IEYIRMHYPEN 429
E+ T ++P + + R+ P N
Sbjct: 230 WELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRN 263
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271 | Back alignment and structure |
|---|
Score = 68.8 bits (169), Expect = 3e-13
Identities = 34/197 (17%), Positives = 67/197 (34%), Gaps = 39/197 (19%)
Query: 254 IYKGILRDGTRVKIEIYKGDVSREIRD---EFVEECKLLVQFQHKNLIRVLGWNNSRRTR 310
+Y+ G V ++ + D +I +E KL +H N+I + G
Sbjct: 23 VYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNL 81
Query: 311 AIVTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPE--VDYDLRTGSVLL 368
+V E+ GG + LS + + + M YL ++ + DL++ ++L+
Sbjct: 82 CLVMEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILI 141
Query: 369 TDNLEPL-------------ISRFK-------------------IEYQHRSTKY-VYKFG 395
+E ++R I S V+ +G
Sbjct: 142 LQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYG 201
Query: 396 LFLLEMITNRRPLEEFE 412
+ L E++T P +
Sbjct: 202 VLLWELLTGEVPFRGID 218
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287 | Back alignment and structure |
|---|
Score = 68.9 bits (169), Expect = 4e-13
Identities = 39/208 (18%), Positives = 75/208 (36%), Gaps = 43/208 (20%)
Query: 254 IYKGILR-DGTRVKIEIYKGD------VSREIRDEFVEECKLLVQFQHKNLIRVLGWNNS 306
++KG L D + V I+ E EF E ++ H N++++ G
Sbjct: 35 VHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGL--M 92
Query: 307 RRTRAIVTEWTNGGNVELWL--SESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDY-DLRT 363
+V E+ G++ L W +L++++ + + Y+Q Q P + + DLR+
Sbjct: 93 HNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRS 152
Query: 364 GSVLLTDNLEPL----------ISRFKIE----------------YQHRSTKY-----VY 392
++ L E +S+ + Y Y
Sbjct: 153 PNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTY 212
Query: 393 KFGLFLLEMITNRRPLEEFERGEAGFIE 420
F + L ++T P +E+ G+ FI
Sbjct: 213 SFAMILYTILTGEGPFDEYSYGKIKFIN 240
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 65.3 bits (159), Expect = 8e-12
Identities = 27/109 (24%), Positives = 39/109 (35%), Gaps = 13/109 (11%)
Query: 61 NCVESFPKIDLRSRPKITPLYLSFNFF-------WKYCPLGIMSI---DLSNN---SLKG 107
+F +R P ++ L LS N CPL ++ L N + G
Sbjct: 159 AHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSG 218
Query: 108 AFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSE 156
Q+Q LDLS+N L S + L LNLS+ +
Sbjct: 219 VCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLKQ 267
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 46.8 bits (111), Expect = 7e-06
Identities = 12/102 (11%), Positives = 25/102 (24%), Gaps = 5/102 (4%)
Query: 73 SRPKITPLYLSFNFFWKYCPLGIMSIDLSNNSLKGAFPIDVL-LCTQIQALDLSYNQLSG 131
++ G+ + ++ F + + + + LDLS N G
Sbjct: 129 RNVSWATRDAWLAELQQWLKPGLKVLSIAQAHS-LNFSCEQVRVFPALSTLDLSDNPELG 187
Query: 132 DIPVESFSV---LANLTFLNLSYNHFSEMKVSDTKFFQRFNS 170
+ + S L L L +
Sbjct: 188 ERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQ 229
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 46.4 bits (110), Expect = 1e-05
Identities = 15/67 (22%), Positives = 26/67 (38%), Gaps = 6/67 (8%)
Query: 97 SIDLSNNSLKGAFPIDVLLC----TQIQALDLSYNQLS--GDIPVESFSVLANLTFLNLS 150
++DLS+N G + LC +Q L L + + + L L+LS
Sbjct: 177 TLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLS 236
Query: 151 YNHFSEM 157
+N +
Sbjct: 237 HNSLRDA 243
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 45.7 bits (108), Expect = 2e-05
Identities = 25/87 (28%), Positives = 34/87 (39%), Gaps = 19/87 (21%)
Query: 80 LYLSFN----------FFWKYCPLGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQL 129
L LS N W P + S++LS LK L ++ LDLSYN+L
Sbjct: 233 LDLSHNSLRDAAGAPSCDW---PSQLNSLNLSFTGLKQVPKG---LPAKLSVLDLSYNRL 286
Query: 130 SGDIPVESFSVLANLTFLNLSYNHFSE 156
S L + L+L N F +
Sbjct: 287 DR---NPSPDELPQVGNLSLKGNPFLD 310
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 62.7 bits (153), Expect = 1e-10
Identities = 18/106 (16%), Positives = 38/106 (35%), Gaps = 10/106 (9%)
Query: 61 NCVESFPKIDLRSRPKITPLYLSFNF----------FWKYCPLGIMSIDLSNNSLKGAFP 110
N + + L LS +F F + ++L+ N +
Sbjct: 339 NDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIES 398
Query: 111 IDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSE 156
++ LDL N++ ++ + + L N+ + LSYN + +
Sbjct: 399 DAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQ 444
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 56.9 bits (138), Expect = 9e-09
Identities = 25/102 (24%), Positives = 38/102 (37%), Gaps = 7/102 (6%)
Query: 61 NCVESFPKIDLRSRPKITPLYLSFNFFWK-----YCPLG-IMSIDLSNNSLKGAFPIDVL 114
N + P + ++T L + FN K L + ++L +N L
Sbjct: 35 NQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFA 94
Query: 115 LCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSE 156
CT + L L N + I F NL L+LS+N S
Sbjct: 95 FCTNLTELHLMSNSIQK-IKNNPFVKQKNLITLDLSHNGLSS 135
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 56.5 bits (137), Expect = 1e-08
Identities = 24/85 (28%), Positives = 29/85 (34%), Gaps = 10/85 (11%)
Query: 80 LYLSFNFF--------WKYCPLGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSG 131
L L N W+ I I LS N L +Q L L L
Sbjct: 410 LDLGLNEIGQELTGQEWRGLE-NIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKN 468
Query: 132 -DIPVESFSVLANLTFLNLSYNHFS 155
D F L NLT L+LS N+ +
Sbjct: 469 VDSSPSPFQPLRNLTILDLSNNNIA 493
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 56.5 bits (137), Expect = 1e-08
Identities = 26/118 (22%), Positives = 43/118 (36%), Gaps = 10/118 (8%)
Query: 61 NCVESFPKIDLRSRPKITPLYLSFNFFWK------YCPLGIMSIDLSNNSLKGAFPIDVL 114
N + + P + L L N + + + L +NS++ +
Sbjct: 59 NTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFV 118
Query: 115 LCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSS 172
+ LDLS+N LS + + L NL L LS N +K + F +SS
Sbjct: 119 KQKNLITLDLSHNGLSS-TKLGTQVQLENLQELLLSNNKIQALKSEE---LDIFANSS 172
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 56.2 bits (136), Expect = 2e-08
Identities = 22/107 (20%), Positives = 38/107 (35%), Gaps = 10/107 (9%)
Query: 61 NCVESFPKIDLRSRPKITPLYLSFNF--------FWKYCPLGIMSIDLSNNSLKGAFPID 112
N + S + L LS N + + ++LS+N +K P
Sbjct: 131 NGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGC 190
Query: 113 VLLCTQIQALDLSYNQLSGDIPVESFSVLAN--LTFLNLSYNHFSEM 157
++ L L+ QL + + LAN + L+LS + S
Sbjct: 191 FHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTT 237
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 55.4 bits (134), Expect = 3e-08
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 97 SIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFS 155
D S+ L P D+ T I L+L++NQL +P +F+ + LT L++ +N S
Sbjct: 8 VADCSHLKLT-QVPDDLP--TNITVLNLTHNQLRR-LPAANFTRYSQLTSLDVGFNTIS 62
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 55.4 bits (134), Expect = 3e-08
Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 92 PLGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSY 151
P I ++L++N L+ + +Q+ +LD+ +N +S + E L L LNL +
Sbjct: 24 PTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISK-LEPELCQKLPMLKVLNLQH 82
Query: 152 NHFSEM 157
N S++
Sbjct: 83 NELSQL 88
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 54.6 bits (132), Expect = 4e-08
Identities = 22/111 (19%), Positives = 40/111 (36%), Gaps = 10/111 (9%)
Query: 61 NCVESFPKIDLRSRPKITPLYLSFNFFWKYCPLGIMSIDLSNNSLKGAFPIDVLLCTQIQ 120
N ++ L + L L +F +S SL ++
Sbjct: 282 NNIQHLFSHSLHGLFNVRYLNLKRSFTK---------QSISLASLPKIDDFSFQWLKCLE 332
Query: 121 ALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSS 171
L++ N + G I F+ L NL +L+LS + S +++ F +S
Sbjct: 333 HLNMEDNDIPG-IKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSP 382
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 53.1 bits (128), Expect = 1e-07
Identities = 22/96 (22%), Positives = 36/96 (37%), Gaps = 17/96 (17%)
Query: 75 PKITPLYLSFNFFWKYCPLGIMS-------IDLSNNSL--------KGAFPIDVLLCTQI 119
+T L LS N ++ +DL +N+L G + + +
Sbjct: 480 RNLTILDLSNNNI-ANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHL 538
Query: 120 QALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFS 155
L+L N IPVE F L L ++L N+ +
Sbjct: 539 HILNLESNGFDE-IPVEVFKDLFELKIIDLGLNNLN 573
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 52.7 bits (127), Expect = 2e-07
Identities = 21/103 (20%), Positives = 36/103 (34%), Gaps = 8/103 (7%)
Query: 60 PNCVESFPKIDLRSRPKITPLYLSFNFFWKYCPLGIMS-------IDLSNNSLKGAFPID 112
+ P L+ + L L N F P+ + IDL N+L
Sbjct: 521 KHANPGGPIYFLKGLSHLHILNLESNGF-DEIPVEVFKDLFELKIIDLGLNNLNTLPASV 579
Query: 113 VLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFS 155
+++L+L N ++ NLT L++ +N F
Sbjct: 580 FNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFD 622
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 3e-07
Identities = 14/62 (22%), Positives = 25/62 (40%), Gaps = 3/62 (4%)
Query: 98 IDLSNNSLKGAFPIDVLL--CTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFS 155
+ L +LK + LDLS N ++ I + L L L+L +N+ +
Sbjct: 459 LMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIAN-INDDMLEGLEKLEILDLQHNNLA 517
Query: 156 EM 157
+
Sbjct: 518 RL 519
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 51.5 bits (124), Expect = 4e-07
Identities = 24/158 (15%), Positives = 41/158 (25%), Gaps = 25/158 (15%)
Query: 24 IHNPSLKYCNSSSPMDLNEIFKSTIVASHLCNESKNP---------NCVESFPKIDLRS- 73
+ LN + + LC E N + + +
Sbjct: 186 FSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGL 245
Query: 74 -RPKITPLYLSFNFFWKYCPLGI------MSIDLSNNSLKGAFPIDVLLCTQIQALDLSY 126
+T L LS+N L N+++ F + ++ L+L
Sbjct: 246 KWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKR 305
Query: 127 NQLSGD--------IPVESFSVLANLTFLNLSYNHFSE 156
+ I SF L L LN+ N
Sbjct: 306 SFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPG 343
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 50.8 bits (122), Expect = 8e-07
Identities = 24/111 (21%), Positives = 39/111 (35%), Gaps = 15/111 (13%)
Query: 61 NCVESFPKIDLRSRPKITPLYLSFNFFWK----YCPLGIMS----IDLSNNSLKGAFPID 112
N + P + L L P + +DLSNN++
Sbjct: 440 NKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDM 499
Query: 113 VLLCTQIQALDLSYNQLS-------GDIPVESFSVLANLTFLNLSYNHFSE 156
+ +++ LDL +N L+ P+ L++L LNL N F E
Sbjct: 500 LEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDE 550
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 49.2 bits (118), Expect = 2e-06
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Query: 97 SIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLAN--LTFLNLSYNHF 154
++DLS+N L + +Q L LS N++ + E + AN L L LS N
Sbjct: 125 TLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQA-LKSEELDIFANSSLKKLELSSNQI 183
Query: 155 SE 156
E
Sbjct: 184 KE 185
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289 | Back alignment and structure |
|---|
Score = 61.2 bits (149), Expect = 2e-10
Identities = 38/188 (20%), Positives = 71/188 (37%), Gaps = 37/188 (19%)
Query: 254 IYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIV 313
+YKG VK+ + + + F E +L + +H N++ +G+ ++ AIV
Sbjct: 40 VYKGKWHGDVAVKM-LNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-STAPQLAIV 97
Query: 314 TEWTNGGNVE--LWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDN 371
T+W G ++ L SE+ K + + M YL + DL++ ++ L ++
Sbjct: 98 TQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYL-HAKSIIHRDLKSNNIFLHED 156
Query: 372 LEPLI-----SRFKIEYQHRST----------------------KY-----VYKFGLFLL 399
I + K + Y VY FG+ L
Sbjct: 157 NTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLY 216
Query: 400 EMITNRRP 407
E++T + P
Sbjct: 217 ELMTGQLP 224
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 62.4 bits (152), Expect = 2e-10
Identities = 16/89 (17%), Positives = 35/89 (39%), Gaps = 7/89 (7%)
Query: 75 PKITPLYLSFNFFWKYCPLGIMS-------IDLSNNSLKGAFPIDVLLCTQIQALDLSYN 127
++ L + + + +D+S+ + AF + ++ L ++ N
Sbjct: 396 EQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGN 455
Query: 128 QLSGDIPVESFSVLANLTFLNLSYNHFSE 156
+ + F+ L NLTFL+LS +
Sbjct: 456 SFQENFLPDIFTELRNLTFLDLSQCQLEQ 484
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 61.2 bits (149), Expect = 4e-10
Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Query: 97 SIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFS 155
+DLS N + + L Q++ LD ++ L F L NL +L++S+ H
Sbjct: 377 YLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTR 434
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 59.3 bits (144), Expect = 2e-09
Identities = 19/88 (21%), Positives = 34/88 (38%), Gaps = 8/88 (9%)
Query: 75 PKITPLYLSFNFFWKYCPLGIMS-------IDLSNNSLKGAFPIDVLLCTQIQALDLSYN 127
+ L ++ N F + I + +DLS L+ P + +Q L++S+N
Sbjct: 445 SSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHN 504
Query: 128 QLSGDIPVESFSVLANLTFLNLSYNHFS 155
+ L +L L+ S NH
Sbjct: 505 NFFSLDT-FPYKCLNSLQVLDYSLNHIM 531
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 57.7 bits (140), Expect = 5e-09
Identities = 23/119 (19%), Positives = 32/119 (26%), Gaps = 22/119 (18%)
Query: 80 LYLSFNFFWKYCP----------LGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQL 129
L LS N L +S+DLS N + ++ L L N
Sbjct: 154 LDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNF-IQPGAFKEIRLHKLTLRNNFD 212
Query: 130 SGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLHSGLFPGHHNYTIK 188
S ++ LA L L F + G N TI+
Sbjct: 213 SLNVMKTCIQGLAGLEVHRLVLGEFRN-----------EGNLEKFDKSALEGLCNLTIE 260
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 57.0 bits (138), Expect = 9e-09
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Query: 92 PLGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSY 151
P ++DLS N L+ ++Q LDLS ++ I ++ L++L+ L L+
Sbjct: 27 PFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQT-IEDGAYQSLSHLSTLILTG 85
Query: 152 NHFSE 156
N
Sbjct: 86 NPIQS 90
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 54.6 bits (132), Expect = 5e-08
Identities = 16/82 (19%), Positives = 32/82 (39%), Gaps = 3/82 (3%)
Query: 97 SIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSE 156
+ +L + ++ L++++N + E FS L NL L+LS N
Sbjct: 104 KLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 163
Query: 157 MKVSDTKFFQRFNSSSFLHSGL 178
+ +D + + L+ L
Sbjct: 164 IYCTD---LRVLHQMPLLNLSL 182
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 54.3 bits (131), Expect = 6e-08
Identities = 17/89 (19%), Positives = 32/89 (35%), Gaps = 7/89 (7%)
Query: 75 PKITPLYLSFNFFWKYCPLGIMS------IDLSNNSLKGAFPIDVLLCTQIQALDLSYNQ 128
L LSFN S +DLS ++ + + L L+ N
Sbjct: 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNP 87
Query: 129 LSGDIPVESFSVLANLTFLNLSYNHFSEM 157
+ + + +FS L++L L + + +
Sbjct: 88 IQS-LALGAFSGLSSLQKLVAVETNLASL 115
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 2e-07
Identities = 15/59 (25%), Positives = 26/59 (44%)
Query: 97 SIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFS 155
+++S+N+ +Q LD S N + E ++L FLNL+ N F+
Sbjct: 498 VLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFA 556
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 51.6 bits (124), Expect = 4e-07
Identities = 29/127 (22%), Positives = 49/127 (38%), Gaps = 13/127 (10%)
Query: 64 ESFPKIDLRSRPKITPLYLSFNFFWKYCPLG-IMSIDLSNNSL--KGAFPIDVLLCTQIQ 120
FP + L+S ++T + L + +DLS N L KG T ++
Sbjct: 317 GQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLK 376
Query: 121 ALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLH----- 175
LDLS+N + +F L L L+ +++ +M S+ F + +L
Sbjct: 377 YLDLSFNGVITMSS--NFLGLEQLEHLDFQHSNLKQM--SEFSVFLSLRNLIYLDISHTH 432
Query: 176 -SGLFPG 181
F G
Sbjct: 433 TRVAFNG 439
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 50.0 bits (120), Expect = 1e-06
Identities = 20/79 (25%), Positives = 32/79 (40%), Gaps = 3/79 (3%)
Query: 80 LYLSFNFFWKYCPLGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSG-DIPVESF 138
+ F F + + ++N AF L ++ LDLS N LS +S
Sbjct: 312 VNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDL--PSLEFLDLSRNGLSFKGCCSQSD 369
Query: 139 SVLANLTFLNLSYNHFSEM 157
+L +L+LS+N M
Sbjct: 370 FGTTSLKYLDLSFNGVITM 388
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 49.6 bits (119), Expect = 1e-06
Identities = 14/65 (21%), Positives = 23/65 (35%), Gaps = 4/65 (6%)
Query: 91 CPLGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLS 150
+ ++ + P + L + LDLS+N L + SF L L+LS
Sbjct: 5 EVVPNITYQCMELNFY-KIPDN--LPFSTKNLDLSFNPLRH-LGSYSFFSFPELQVLDLS 60
Query: 151 YNHFS 155
Sbjct: 61 RCEIQ 65
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 6e-06
Identities = 19/100 (19%), Positives = 29/100 (29%), Gaps = 4/100 (4%)
Query: 82 LSFNFFWKYCPLGIMSIDLSNNSLKGAFPIDVLLC-TQIQALDLSYNQLSGDIPVESFSV 140
+ C L I L+ ID+ C T + + L + V+ FS
Sbjct: 246 FDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIER---VKDFSY 302
Query: 141 LANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLHSGLFP 180
L L F + K +R +S F
Sbjct: 303 NFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFS 342
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 43.9 bits (104), Expect = 1e-04
Identities = 16/96 (16%), Positives = 27/96 (28%), Gaps = 10/96 (10%)
Query: 75 PKITPLYLSFNFFWKYCPLGIMS----IDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLS 130
++ L + ++L N L ++ L + N+
Sbjct: 282 TNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQ---FPTLKLKSLKRLTFTSNKGG 338
Query: 131 GDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQ 166
S L +L FL+LS N S F
Sbjct: 339 NAF---SEVDLPSLEFLDLSRNGLSFKGCCSQSDFG 371
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310 | Back alignment and structure |
|---|
Score = 60.8 bits (148), Expect = 2e-10
Identities = 35/227 (15%), Positives = 76/227 (33%), Gaps = 56/227 (24%)
Query: 254 IYKGILRD-GTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAI 312
K R+ G + ++ E + F++E K++ +H N+++ +G +
Sbjct: 26 AIKVTHRETGEVMVMKELI-RFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNF 84
Query: 313 VTEWTNGGNVELWL--SESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDY---DLRTGSVL 367
+TE+ GG + + +S W R+ + M YL + DL + + L
Sbjct: 85 ITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSM----NIIHRDLNSHNCL 140
Query: 368 LTDNLEPLI-----SRFKIEYQHRST-------------------------------KY- 390
+ +N ++ +R ++ + + Y
Sbjct: 141 VRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYD 200
Query: 391 ----VYKFGLFLLEMITNRRPLEEFERGEAGFIEYI----RMHYPEN 429
V+ FG+ L E+I ++ F + + P N
Sbjct: 201 EKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRYCPPN 247
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 60.8 bits (148), Expect = 5e-10
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Query: 97 SIDLSNNSLKGAFPIDVLL--CTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHF 154
I + N+LK FP++ L ++ L+ YNQL G +P +F L LNL+YN
Sbjct: 309 IIYIGYNNLKT-FPVETSLQKMKKLGMLECLYNQLEGKLP--AFGSEIKLASLNLAYNQI 365
Query: 155 SE 156
+E
Sbjct: 366 TE 367
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 58.5 bits (142), Expect = 3e-09
Identities = 13/60 (21%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Query: 97 SIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSE 156
++ N L+G P ++ +L+L+YNQ++ IP + L+ ++N
Sbjct: 334 MLECLYNQLEGKLP-AFGSEIKLASLNLAYNQITE-IPANFCGFTEQVENLSFAHNKLKY 391
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 56.6 bits (137), Expect = 1e-08
Identities = 21/117 (17%), Positives = 43/117 (36%), Gaps = 22/117 (18%)
Query: 61 NCVESFPK-IDLRSRPKITPLYLSFNFFWKYCPLGIMSI-------------DLSNNSLK 106
N ++ P D +S ++ + S+N + +LSNN +
Sbjct: 387 NKLKYIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQIS 446
Query: 107 GAFPIDVLLCTQIQALDLSYNQLSGDIPV-------ESFSVLANLTFLNLSYNHFSE 156
+ + +++L N L+ IP E+F LT ++L +N ++
Sbjct: 447 KFPKELFSTGSPLSSINLMGNMLTE-IPKNSLKDENENFKNTYLLTSIDLRFNKLTK 502
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 55.0 bits (133), Expect = 4e-08
Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 9/68 (13%)
Query: 97 SIDLSNNSLKG-------AFPIDVLLCTQIQALDLSYNQLSGDIPVE-SFSVLANLTFLN 148
SI+L N L + + ++DL +N+L+ + + + L L ++
Sbjct: 461 SINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRFNKLTK-LSDDFRATTLPYLVGID 519
Query: 149 LSYNHFSE 156
LSYN FS+
Sbjct: 520 LSYNSFSK 527
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 54.7 bits (132), Expect = 4e-08
Identities = 16/152 (10%), Positives = 38/152 (25%), Gaps = 5/152 (3%)
Query: 5 DLNNLHPPPDFNSTIMNNCIHNPSLKYCNSSSPMDLNEIFKSTIVASHLCNESKNPNCVE 64
+H F L +S I KS+ + + N +
Sbjct: 139 QKMRMHYQKTFVDYDPRE--DFSDLIKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNIT 196
Query: 65 SFPKIDLRSRPKITPLYLSFNFFWKYCPLGIM-SIDLSNNSLKGAFPIDVLLCTQIQALD 123
K + K+ Y+ + F + + + + ++
Sbjct: 197 FVSK-AVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVE 255
Query: 124 LSYNQLSGDIPVESFSVLANLTFLNLSYNHFS 155
+ +P L + +N++ N
Sbjct: 256 VYNCPNLTKLP-TFLKALPEMQLINVACNRGI 286
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 53.5 bits (129), Expect = 9e-08
Identities = 14/96 (14%), Positives = 28/96 (29%), Gaps = 16/96 (16%)
Query: 76 KITPLYLSFNFFWKYCPLGI------MSIDLSNNSLKGAFPIDVLL--------CTQIQA 121
+T + + P + I+++ N + +IQ
Sbjct: 250 DLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQI 309
Query: 122 LDLSYNQL-SGDIPVESFSVLANLTFLNLSYNHFSE 156
+ + YN L + + S + L L YN
Sbjct: 310 IYIGYNNLKTFPVE-TSLQKMKKLGMLECLYNQLEG 344
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 52.7 bits (127), Expect = 2e-07
Identities = 11/62 (17%), Positives = 25/62 (40%), Gaps = 4/62 (6%)
Query: 99 DLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMK 158
D N +P + LC + L + N + + + + N++ L++ N +
Sbjct: 548 DAQGNRTLREWPEGITLCPSLTQLQIGSNDIRK-VNEK---ITPNISVLDIKDNPNISID 603
Query: 159 VS 160
+S
Sbjct: 604 LS 605
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 50.4 bits (121), Expect = 1e-06
Identities = 11/60 (18%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Query: 97 SIDLSNNSLKGAFPIDVL-LCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFS 155
S++L+ N + P + Q++ L ++N+L + ++ ++ ++ SYN
Sbjct: 357 SLNLAYNQITE-IPANFCGFTEQVENLSFAHNKLKYIPNIFDAKSVSVMSAIDFSYNEIG 415
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 2e-06
Identities = 7/62 (11%), Positives = 18/62 (29%), Gaps = 3/62 (4%)
Query: 97 SIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFL---NLSYNH 153
+ L G P + T+++ L L + + + ++ H
Sbjct: 85 GLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMH 144
Query: 154 FS 155
+
Sbjct: 145 YQ 146
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 47.7 bits (114), Expect = 7e-06
Identities = 8/60 (13%), Positives = 20/60 (33%), Gaps = 4/60 (6%)
Query: 97 SIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSE 156
+ + +N ++ ++ + I LD+ N I + L Y+ +
Sbjct: 570 QLQIGSNDIRK---VNEKITPNISVLDIKDNPNIS-IDLSYVCPYIEAGMYMLFYDKTQD 625
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377 | Back alignment and structure |
|---|
Score = 60.3 bits (147), Expect = 5e-10
Identities = 32/131 (24%), Positives = 63/131 (48%), Gaps = 10/131 (7%)
Query: 255 YKGILR-DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIV 313
+ G LR D T V ++ + + +++ +F++E ++L Q+ H N++R++G ++ IV
Sbjct: 131 FSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIV 190
Query: 314 TEWTNGGNVELWL--SESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDY---DLRTGSVLL 368
E GG+ +L + K L+++ M YL+ + DL + L+
Sbjct: 191 MELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESK----CCIHRDLAARNCLV 246
Query: 369 TDNLEPLISRF 379
T+ IS F
Sbjct: 247 TEKNVLKISDF 257
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 60.4 bits (147), Expect = 8e-10
Identities = 29/128 (22%), Positives = 44/128 (34%), Gaps = 20/128 (15%)
Query: 75 PKITPLYLSFNFF-------WKYCPLGIMSIDLSNNSLKGAFPIDVLL-CTQIQALDLSY 126
+ L LS+N +K CP + +DL+ LK ++ L+LS+
Sbjct: 376 SHLQSLNLSYNEPLSLKTEAFKECP-QLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSH 434
Query: 127 NQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQ----------RFNSSSFLHS 176
+ L + F L L LNL NHF + + T Q F S +
Sbjct: 435 SLLDI-SSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQ 493
Query: 177 GLFPGHHN 184
F
Sbjct: 494 HAFTSLKM 501
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 55.4 bits (134), Expect = 3e-08
Identities = 12/69 (17%), Positives = 23/69 (33%)
Query: 97 SIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSE 156
+ LS N + I + L + N ++ L NL L+LS++
Sbjct: 305 KLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIET 364
Query: 157 MKVSDTKFF 165
+ +
Sbjct: 365 SDCCNLQLR 373
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 53.1 bits (128), Expect = 2e-07
Identities = 15/66 (22%), Positives = 23/66 (34%), Gaps = 1/66 (1%)
Query: 92 PLGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSY 151
P ++ S N L + LDL+ Q+ I ++F L L L+
Sbjct: 32 PNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYW-IHEDTFQSQHRLDTLVLTA 90
Query: 152 NHFSEM 157
N M
Sbjct: 91 NPLIFM 96
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 3e-07
Identities = 17/67 (25%), Positives = 26/67 (38%), Gaps = 4/67 (5%)
Query: 90 YCPLGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNL 149
+ + N L P + + L+ S+N L I +FS L NLTFL+L
Sbjct: 9 IEKEVNKTYNCENLGLN-EIPGTLP--NSTECLEFSFNVLPT-IQNTTFSRLINLTFLDL 64
Query: 150 SYNHFSE 156
+
Sbjct: 65 TRCQIYW 71
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 51.9 bits (125), Expect = 3e-07
Identities = 14/96 (14%), Positives = 27/96 (28%), Gaps = 10/96 (10%)
Query: 97 SIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSE 156
+ + I + +++L L N +S I + L L+ N
Sbjct: 109 HLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISS-IKLPKGFPTEKLKVLDFQNNAIHY 167
Query: 157 MKVSDTKFFQR---------FNSSSFLHSGLFPGHH 183
+ D Q+ N + + G F
Sbjct: 168 LSKEDMSSLQQATNLSLNLNGNDIAGIEPGAFDSAV 203
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 48.9 bits (117), Expect = 3e-06
Identities = 9/65 (13%), Positives = 24/65 (36%), Gaps = 3/65 (4%)
Query: 95 IMSIDLSNNSLKG--AFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYN 152
+ + + + L +++++L + +F + L L+L+
Sbjct: 230 LWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISS-NTFHCFSGLQELDLTAT 288
Query: 153 HFSEM 157
H SE+
Sbjct: 289 HLSEL 293
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 48.9 bits (117), Expect = 3e-06
Identities = 15/90 (16%), Positives = 24/90 (26%), Gaps = 9/90 (10%)
Query: 75 PKITPLYLSFNFFWKYCPLGIM------SIDLSNNSLKGAFPIDVLL-CTQIQALDLSYN 127
L SFN +DL+ + D ++ L L+ N
Sbjct: 33 NSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYW-IHEDTFQSQHRLDTLVLTAN 91
Query: 128 QLSGDIPVESFSVLANLTFLNLSYNHFSEM 157
L + + S L L S +
Sbjct: 92 PLIF-MAETALSGPKALKHLFFIQTGISSI 120
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 1e-04
Identities = 22/136 (16%), Positives = 42/136 (30%), Gaps = 21/136 (15%)
Query: 75 PKITPLYLSFNFFWKYCPLG-------IMSIDLSNNSLKGAFP--IDVLLCTQIQALDLS 125
+ LYL N L + +D NN++ + L +L+L+
Sbjct: 129 KTLESLYLGSNHI-SSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLN 187
Query: 126 YNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQ---------RFNSSSFLHS 176
N ++G I +F A LN + K +
Sbjct: 188 GNDIAG-IEPGAFD-SAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISP 245
Query: 177 GLFPGHHNYTIKAVIL 192
+F G +++++ L
Sbjct: 246 AVFEGLCEMSVESINL 261
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454 | Back alignment and structure |
|---|
Score = 59.7 bits (145), Expect = 8e-10
Identities = 43/219 (19%), Positives = 81/219 (36%), Gaps = 58/219 (26%)
Query: 255 YKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVT 314
+ T+V ++ K + F+ E ++ QH L+++ ++ I+T
Sbjct: 205 WMATYNKHTKVAVKTMKPGSMS--VEAFLAEANVMKTLQHDKLVKLHA-VVTKEPIYIIT 261
Query: 315 EWTNGGNVELWLSE---SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDY---DLRTGSVLL 368
E+ G++ +L S + + E M +++++ +Y DLR ++L+
Sbjct: 262 EFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR----NYIHRDLRAANILV 317
Query: 369 TDNLEPLISRF-------KIEYQHRS-TKYVYK--------------------FGLFLLE 400
+ +L I+ F EY R K+ K FG+ L+E
Sbjct: 318 SASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLME 377
Query: 401 MIT----------NRRPLEEFERGEAGFIEYIRMHYPEN 429
++T N + ERG RM PEN
Sbjct: 378 IVTYGRIPYPGMSNPEVIRALERGY-------RMPRPEN 409
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 58.1 bits (141), Expect = 2e-09
Identities = 32/185 (17%), Positives = 68/185 (36%), Gaps = 25/185 (13%)
Query: 254 IYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIV 313
+Y G +++ I + + F E Q +H+N++ +G S AI+
Sbjct: 49 VYHGRWHGEVAIRL-IDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAII 107
Query: 314 TEWTNGGNVE--LWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDN 371
T G + + ++ ++ +V+ M YL + + DL++ +V +
Sbjct: 108 TSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAK-GILHKDLKSKNVFYDNG 166
Query: 372 LEPLISRFKIEYQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEY-----IRMHY 426
+ I FGLF + + E+ R + G++ + IR
Sbjct: 167 ------KVVIT----------DFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLS 210
Query: 427 PENLQ 431
P+ +
Sbjct: 211 PDTEE 215
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336 | Back alignment and structure |
|---|
Score = 58.3 bits (141), Expect = 2e-09
Identities = 34/159 (21%), Positives = 64/159 (40%), Gaps = 20/159 (12%)
Query: 236 ATNGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECK--LLVQFQ 293
+ L+G+ A+YKG L V ++++ S R F+ E + +
Sbjct: 11 DLDNLKLLELIGRGRYGAVYKGSLD-ERPVAVKVF----SFANRQNFINEKNIYRVPLME 65
Query: 294 HKNLIRVLG-----WNNSRRTRAIVTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMC 348
H N+ R + + R +V E+ G++ +LS W ++ V +
Sbjct: 66 HDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLA 125
Query: 349 YLQEQWPEVDY--------DLRTGSVLLTDNLEPLISRF 379
YL + P D+ DL + +VL+ ++ +IS F
Sbjct: 126 YLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDF 164
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 59.1 bits (143), Expect = 2e-09
Identities = 23/109 (21%), Positives = 41/109 (37%), Gaps = 15/109 (13%)
Query: 61 NCVESFPKIDLRSRPKITPLYLSFN--------FFWKYCPLGIMSIDLSNNSLKG----- 107
N +E P+ ++ L S N F K + S+D S N +
Sbjct: 605 NQIEEIPEDFCAFTDQVEGLGFSHNKLKYIPNIFNAKSVY-VMGSVDFSYNKIGSEGRNI 663
Query: 108 AFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSE 156
+ +D + LSYN++ P E F+ + ++ + LS N +
Sbjct: 664 SCSMDDYKGINASTVTLSYNEIQK-FPTELFATGSPISTIILSNNLMTS 711
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 58.0 bits (140), Expect = 5e-09
Identities = 16/118 (13%), Positives = 36/118 (30%), Gaps = 17/118 (14%)
Query: 61 NCVESFPKIDLRSRPKITPLYLSFNFFWKYCPLGIMSIDLSNNSLKGAFPIDVLLCTQIQ 120
NC SFP + ++ + D N + +P + C +
Sbjct: 763 NCFSSFPT-QPLNSSQLKAFGIRHQ------------RDAEGNRILRQWPTGITTCPSLI 809
Query: 121 ALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLHSGL 178
L + N + + + + L L+++ N + V+ + L+
Sbjct: 810 QLQIGSNDIRK-VDEK---LTPQLYILDIADNPNISIDVTSVCPYIEAGMYVLLYDKT 863
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 56.4 bits (136), Expect = 1e-08
Identities = 14/139 (10%), Positives = 39/139 (28%), Gaps = 3/139 (2%)
Query: 39 DLNEIFKSTIVASHLCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCP-LGIMS 97
++ I K + ++ N + K ++ K+ +Y + + F +
Sbjct: 413 EMKPIKKDSRISLKDTQIGNLTNRITFISK-AIQRLTKLQIIYFANSPFTYDNIAVDWED 471
Query: 98 IDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEM 157
+ + + ++L +P + L L LN++ N
Sbjct: 472 ANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLP-DFLYDLPELQSLNIACNRGISA 530
Query: 158 KVSDTKFFQRFNSSSFLHS 176
+ + +
Sbjct: 531 AQLKADWTRLADDEDTGPK 549
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 54.9 bits (132), Expect = 5e-08
Identities = 15/97 (15%), Positives = 28/97 (28%), Gaps = 15/97 (15%)
Query: 75 PKITPLYLSFNFFWKYCPLGIM------SIDLSNNSLKGAFPIDVLL---------CTQI 119
+T + L P + S++++ N A + +I
Sbjct: 491 KDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKI 550
Query: 120 QALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSE 156
Q + YN L S + L L+ +N
Sbjct: 551 QIFYMGYNNLEEFPASASLQKMVKLGLLDCVHNKVRH 587
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 54.1 bits (130), Expect = 8e-08
Identities = 11/97 (11%), Positives = 30/97 (30%), Gaps = 14/97 (14%)
Query: 80 LYLSFNFFWKYCPLGIM------SIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDI 133
+ ++ L ++L N P + ++Q+L+++ N+
Sbjct: 472 ANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAA 531
Query: 134 PV--------ESFSVLANLTFLNLSYNHFSEMKVSDT 162
+ + + + YN+ E S +
Sbjct: 532 QLKADWTRLADDEDTGPKIQIFYMGYNNLEEFPASAS 568
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 53.7 bits (129), Expect = 1e-07
Identities = 22/109 (20%), Positives = 41/109 (37%), Gaps = 19/109 (17%)
Query: 64 ESFPKIDLRSRPKITPLYLSFN--------FFWKYCPLGIMSIDLSNNSLK-------GA 108
+D + + LS+N F P+ I LSNN +
Sbjct: 662 NISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPIST--IILSNNLMTSIPENSLKP 719
Query: 109 FPIDVLLCTQIQALDLSYNQLSGDIPVE-SFSVLANLTFLNLSYNHFSE 156
+ + +DL +N+L+ + + + L L+ +++SYN FS
Sbjct: 720 KDGNYKNTYLLTTIDLRFNKLTS-LSDDFRATTLPYLSNMDVSYNCFSS 767
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 52.6 bits (126), Expect = 3e-07
Identities = 21/119 (17%), Positives = 43/119 (36%), Gaps = 9/119 (7%)
Query: 61 NCVESFPK-IDLRSRPKITPLYLSFNFFWKYCP-LGIMS----IDLSNNSLKGAFPIDVL 114
N +E FP L+ K+ L N ++ G + L N ++ P D
Sbjct: 558 NNLEEFPASASLQKMVKLGLLDCVHNKV-RHLEAFGTNVKLTDLKLDYNQIEE-IPEDFC 615
Query: 115 -LCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSS 172
Q++ L S+N+L + + + + ++ SYN + + + +
Sbjct: 616 AFTDQVEGLGFSHNKLKYIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGIN 674
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 48.7 bits (116), Expect = 4e-06
Identities = 13/108 (12%), Positives = 31/108 (28%), Gaps = 6/108 (5%)
Query: 55 NESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCPLGIM------SIDLSNNSLKGA 108
N +K + P +DL + ++T L L+ P I + +S +
Sbjct: 303 NFNKELDMWGDQPGVDLDNNGRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVS 362
Query: 109 FPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSE 156
+ + +++ L +L + +
Sbjct: 363 GRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINR 410
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 47.6 bits (113), Expect = 8e-06
Identities = 13/82 (15%), Positives = 25/82 (30%)
Query: 97 SIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSE 156
+ L+ KG P + T+++ L + + + L +
Sbjct: 327 GLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMH 386
Query: 157 MKVSDTKFFQRFNSSSFLHSGL 178
K + QR N S L +
Sbjct: 387 YKKMFLDYDQRLNLSDLLQDAI 408
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 58.9 bits (143), Expect = 2e-09
Identities = 18/103 (17%), Positives = 33/103 (32%), Gaps = 8/103 (7%)
Query: 61 NCVESFPKIDLRSRPKITPLYLSFNFFWKYCPLGIMS-------IDLSNNSLKGAFPIDV 113
N + ++ L + + +D+S + K F
Sbjct: 386 NGAIIMSA-NFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIF 444
Query: 114 LLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSE 156
L T + L ++ N + F+ NLTFL+LS +
Sbjct: 445 LGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQ 487
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 57.3 bits (139), Expect = 6e-09
Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Query: 99 DLSNNSLKGAFPIDVL-LCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSE 156
++ NS K +V T + LDLS QL I F L L LN+S+N+
Sbjct: 454 KMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQ-ISWGVFDTLHRLQLLNMSHNNLLF 511
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 56.6 bits (137), Expect = 1e-08
Identities = 18/109 (16%), Positives = 35/109 (32%), Gaps = 14/109 (12%)
Query: 80 LYLSFNFF----------WKYCPLGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQL 129
+ LS+N+ + P +S+D+S N + ++ L L N
Sbjct: 158 VDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDF-IQDQAFQGIKLHELTLRGNFN 216
Query: 130 SGDIPVESFSVLANLTFLNLSYNHFSEM---KVSDTKFFQRFNSSSFLH 175
S +I LA L L F + ++ + + +
Sbjct: 217 SSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDE 265
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 55.0 bits (133), Expect = 3e-08
Identities = 24/127 (18%), Positives = 42/127 (33%), Gaps = 21/127 (16%)
Query: 75 PKITPLYLSFN------FFWKYCPLGIMSIDLSNNSLKGAFPIDVLL-CTQIQALDLSYN 127
+ L LSFN + + +D +++LK L ++ LD+SY
Sbjct: 376 NSLRHLDLSFNGAIIMSANFMGLE-ELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYT 434
Query: 128 QLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQ----------RFNSSSFLHSG 177
F L +L L ++ N F + +S+ F + G
Sbjct: 435 NTKI-DFDGIFLGLTSLNTLKMAGNSFKDNTLSN--VFANTTNLTFLDLSKCQLEQISWG 491
Query: 178 LFPGHHN 184
+F H
Sbjct: 492 VFDTLHR 498
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 53.1 bits (128), Expect = 1e-07
Identities = 15/75 (20%), Positives = 32/75 (42%)
Query: 97 SIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSE 156
++ L + ++ L++++N + FS L NL ++LSYN+
Sbjct: 108 NLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQT 167
Query: 157 MKVSDTKFFQRFNSS 171
+ V+D +F +
Sbjct: 168 ITVNDLQFLRENPQV 182
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 52.7 bits (127), Expect = 2e-07
Identities = 15/65 (23%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
Query: 91 CPLGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLS 150
+ ++ + L P D+ + + +DLS+N L + SFS + L +L+LS
Sbjct: 9 EVVPNITYQCMDQKLS-KVPDDIP--SSTKNIDLSFNPLKI-LKSYSFSNFSELQWLDLS 64
Query: 151 YNHFS 155
Sbjct: 65 RCEIE 69
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 3e-07
Identities = 28/142 (19%), Positives = 53/142 (37%), Gaps = 27/142 (19%)
Query: 61 NCVESFPKIDLRSRPKITPLYLSFNFFWKYCPLGIMS----IDLSNNSLK----GAFPID 112
++ FP +DL P + L L+ N + +DLS N+L ++
Sbjct: 317 CQLKQFPTLDL---PFLKSLTLTMNKGSISFKKVALPSLSYLDLSRNALSFSGCCSYSD- 372
Query: 113 VLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQ------ 166
L ++ LDLS+N I +F L L L+ ++ + ++ F
Sbjct: 373 -LGTNSLRHLDLSFNGAI--IMSANFMGLEELQHLDFQHSTLKRV--TEFSAFLSLEKLL 427
Query: 167 ----RFNSSSFLHSGLFPGHHN 184
+ ++ G+F G +
Sbjct: 428 YLDISYTNTKIDFDGIFLGLTS 449
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 49.6 bits (119), Expect = 2e-06
Identities = 21/118 (17%), Positives = 34/118 (28%), Gaps = 23/118 (19%)
Query: 60 PNCVESFP--KIDLRSR----------PKITPLYLSFNF--------FWKYCPLGIMSID 99
C+E P + + LSFN F + L +D
Sbjct: 5 NPCIEVVPNITYQCMDQKLSKVPDDIPSSTKNIDLSFNPLKILKSYSFSNFSELQW--LD 62
Query: 100 LSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEM 157
LS ++ + L L+ N + SFS L +L L + +
Sbjct: 63 LSRCEIETIEDKAWHGLHHLSNLILTGNPIQS-FSPGSFSGLTSLENLVAVETKLASL 119
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 48.9 bits (117), Expect = 3e-06
Identities = 24/157 (15%), Positives = 52/157 (33%), Gaps = 22/157 (14%)
Query: 4 EDLNNLHPPPDFNSTIMNNCIHNPSLKYCNSSSPMDLNEIFKSTIVASHLCNESKNPNCV 63
++L LH + I+ +L+ S L ++ ++ + S +
Sbjct: 226 QNLAGLH----VHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVKF 281
Query: 64 ESFPKIDLRSRPKITPLYLSFNFFWKYCPLGIM----SIDLSNNSLKGAFPIDVLLCTQI 119
+ + + L+ + S+ + LK L +
Sbjct: 282 HCLANV--------SAMSLAGVSIKYLEDVPKHFKWQSLSIIRCQLKQ---FPTLDLPFL 330
Query: 120 QALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSE 156
++L L+ N+ S L +L++L+LS N S
Sbjct: 331 KSLTLTMNKGSIS---FKKVALPSLSYLDLSRNALSF 364
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 2e-05
Identities = 13/140 (9%), Positives = 34/140 (24%), Gaps = 12/140 (8%)
Query: 17 STIMNNCIHNPSLKYCNSSSPMDLNEIFKSTIVASHLCNESKNPNCVESFPKIDLRSRPK 76
I + L + L F S+ + + V + +
Sbjct: 194 DFIQDQAFQGIKLHE------LTLRGNFNSSNIMKTCLQNLAGLH-VHRLILGEFKDERN 246
Query: 77 ITPLYLSFNFFWKYCPLGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVE 136
+ + C + I L+ + + + A+ L+ + +E
Sbjct: 247 LE--IFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAGVSIKY---LE 301
Query: 137 SFSVLANLTFLNLSYNHFSE 156
L++ +
Sbjct: 302 DVPKHFKWQSLSIIRCQLKQ 321
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 7e-05
Identities = 26/139 (18%), Positives = 41/139 (29%), Gaps = 15/139 (10%)
Query: 61 NCVESFPKIDLRSRPKITPLYLSFNFFWKYCPLGIM--------SIDLSNNSLKG----A 108
+ S + + L ++ NF C L +DLS N ++
Sbjct: 114 TKLASLESFPIGQLITLKKLNVAHNFI-HSCKLPAYFSNLTNLVHVDLSYNYIQTITVND 172
Query: 109 FPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRF 168
+LD+S N + I ++F + L L L N S +
Sbjct: 173 LQFLRENPQVNLSLDMSLNPIDF-IQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAG 230
Query: 169 NSSSFLHSGLFPGHHNYTI 187
L G F N I
Sbjct: 231 LHVHRLILGEFKDERNLEI 249
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373 | Back alignment and structure |
|---|
Score = 57.8 bits (140), Expect = 3e-09
Identities = 33/132 (25%), Positives = 59/132 (44%), Gaps = 9/132 (6%)
Query: 253 AIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAI 312
K + V I+ K + + R +F+ E ++ QF H N+IR+ G + I
Sbjct: 64 GRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123
Query: 313 VTEWTNGGNVELWLSESAPSWKHR--LKVLIGVVEAMCYLQEQWPEVDY---DLRTGSVL 367
VTE+ G+++ +L + + + +L G+ M YL + Y DL ++L
Sbjct: 124 VTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM----GYVHRDLAARNIL 179
Query: 368 LTDNLEPLISRF 379
+ NL +S F
Sbjct: 180 INSNLVCKVSDF 191
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325 | Back alignment and structure |
|---|
Score = 56.9 bits (138), Expect = 5e-09
Identities = 38/134 (28%), Positives = 58/134 (43%), Gaps = 13/134 (9%)
Query: 255 YKGILRDG----TRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTR 310
G LR V I+ K + R +F+ E ++ QF H N+IR+ G R
Sbjct: 66 CYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLA 125
Query: 311 AIVTEWTNGGNVELWLSESAPSWKHR--LKVLIGVVEAMCYLQEQWPEVDY---DLRTGS 365
IVTE+ G+++ +L + + +L GV M YL + Y DL +
Sbjct: 126 MIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDL----GYVHRDLAARN 181
Query: 366 VLLTDNLEPLISRF 379
VL+ NL +S F
Sbjct: 182 VLVDSNLVCKVSDF 195
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450 | Back alignment and structure |
|---|
Score = 56.2 bits (136), Expect = 1e-08
Identities = 45/216 (20%), Positives = 82/216 (37%), Gaps = 56/216 (25%)
Query: 255 YKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGW-NNSRRTRAIV 313
G R G +V ++ K D + + F+ E ++ Q +H NL+++LG + IV
Sbjct: 210 MLGDYR-GNKVAVKCIKNDATAQ---AFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV 265
Query: 314 TEWTNGGNVELWL---SESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDY---DLRTGSVL 367
TE+ G++ +L S LK + V EAM YL+ ++ DL +VL
Sbjct: 266 TEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN----NFVHRDLAARNVL 321
Query: 368 LTDNLEPLISRF----KIEYQHRSTKYVYK--------------------FGLFLLEMIT 403
++++ +S F + + K K FG+ L E+ +
Sbjct: 322 VSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 381
Query: 404 ----------NRRPLEEFERGEAGFIEYIRMHYPEN 429
+ + E+G +M P+
Sbjct: 382 FGRVPYPRIPLKDVVPRVEKGY-------KMDAPDG 410
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333 | Back alignment and structure |
|---|
Score = 55.4 bits (134), Expect = 1e-08
Identities = 36/135 (26%), Positives = 64/135 (47%), Gaps = 14/135 (10%)
Query: 255 YKGILRDGT-----RVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRT 309
YKG+L+ + V I+ K + + R +F+ E ++ QF H N+IR+ G + +
Sbjct: 61 YKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKP 120
Query: 310 RAIVTEWTNGGNVELWL--SESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDY---DLRTG 364
I+TE+ G ++ +L + S + +L G+ M YL +Y DL
Sbjct: 121 MMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANM----NYVHRDLAAR 176
Query: 365 SVLLTDNLEPLISRF 379
++L+ NL +S F
Sbjct: 177 NILVNSNLVCKVSDF 191
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495 | Back alignment and structure |
|---|
Score = 55.9 bits (135), Expect = 2e-08
Identities = 30/132 (22%), Positives = 62/132 (46%), Gaps = 13/132 (9%)
Query: 255 YKGILRD-GTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIV 313
Y+G+ + V ++ K D +EF++E ++ + +H NL+++LG I+
Sbjct: 237 YEGVWKKYSLTVAVKTLKEDTME--VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 294
Query: 314 TEWTNGGNVELWLSESAP---SWKHRLKVLIGVVEAMCYLQEQWPEVDY---DLRTGSVL 367
TE+ GN+ +L E S L + + AM YL+++ ++ +L + L
Sbjct: 295 TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK----NFIHRNLAARNCL 350
Query: 368 LTDNLEPLISRF 379
+ +N ++ F
Sbjct: 351 VGENHLVKVADF 362
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 54.7 bits (132), Expect = 2e-08
Identities = 37/238 (15%), Positives = 82/238 (34%), Gaps = 55/238 (23%)
Query: 252 AAIYKGILRDGTRVKIEIYKGDVSREIRDEFVE-ECKLLVQFQHKNLIRVLG----WNNS 306
++ G R G +V ++++ + E F E E V +H+N++ + S
Sbjct: 51 GEVWMGKWR-GEKVAVKVFF---TTEEASWFRETEIYQTVLMRHENILGFIAADIKGTGS 106
Query: 307 RRTRAIVTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDY------- 359
++T++ G++ +L + K LK+ V +C+L +
Sbjct: 107 WTQLYLITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHR 166
Query: 360 DLRTGSVLLTDNLEPLISRF----------------------------------KIEYQH 385
DL++ ++L+ N I+ + H
Sbjct: 167 DLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNH 226
Query: 386 -RSTKY--VYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMH--YPENLQLVVDERM 438
+S +Y FGL L E+ E + + + + Y + ++V +++
Sbjct: 227 FQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKL 284
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301 | Back alignment and structure |
|---|
Score = 54.3 bits (131), Expect = 3e-08
Identities = 22/133 (16%), Positives = 57/133 (42%), Gaps = 16/133 (12%)
Query: 252 AAIYKGILRDGTRVKIEIYKGDVSREIRDEFVE-ECKLLVQFQHKNLIRVLG----WNNS 306
+++G + G V ++I+ SR+ + F E E V +H+N++ + +S
Sbjct: 22 GEVWRGSWQ-GENVAVKIFS---SRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHS 77
Query: 307 RRTRAIVTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDY------- 359
++T + G++ +L + L++++ + + +L +
Sbjct: 78 STQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHR 137
Query: 360 DLRTGSVLLTDNL 372
DL++ ++L+ N
Sbjct: 138 DLKSKNILVKKNG 150
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342 | Back alignment and structure |
|---|
Score = 54.8 bits (132), Expect = 3e-08
Identities = 37/236 (15%), Positives = 84/236 (35%), Gaps = 55/236 (23%)
Query: 254 IYKGILRDGTRVKIEIYKGDVSREIRDEFVE-ECKLLVQFQHKNLIRVLG----WNNSRR 308
+++G R G V ++I+ SRE R F E E V +H+N++ + N +
Sbjct: 58 VWRGKWR-GEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWT 113
Query: 309 TRAIVTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDY-------DL 361
+V+++ G++ +L+ + + +K+ + + +L + DL
Sbjct: 114 QLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDL 173
Query: 362 RTGSVLLTDNLEPLISRF----------------------------------KIEYQH-R 386
++ ++L+ N I+ I +H
Sbjct: 174 KSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFE 233
Query: 387 STKY--VYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMH--YPENLQLVVDERM 438
S K +Y GL E+ E + + + + E ++V ++++
Sbjct: 234 SFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKL 289
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452 | Back alignment and structure |
|---|
Score = 54.8 bits (132), Expect = 3e-08
Identities = 27/131 (20%), Positives = 58/131 (44%), Gaps = 13/131 (9%)
Query: 255 YKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVT 314
+ G TRV I+ K + F++E +++ + +H+ L+++ S IVT
Sbjct: 201 WMGTWNGTTRVAIKTLKPGTMS--PEAFLQEAQVMKKLRHEKLVQLYAV-VSEEPIYIVT 257
Query: 315 EWTNGGNVELWLSESAP---SWKHRLKVLIGVVEAMCYLQEQWPEVDY---DLRTGSVLL 368
E+ + G++ +L + + + M Y++ +Y DLR ++L+
Sbjct: 258 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM----NYVHRDLRAANILV 313
Query: 369 TDNLEPLISRF 379
+NL ++ F
Sbjct: 314 GENLVCKVADF 324
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267 | Back alignment and structure |
|---|
Score = 53.7 bits (130), Expect = 3e-08
Identities = 28/130 (21%), Positives = 57/130 (43%), Gaps = 11/130 (8%)
Query: 255 YKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVT 314
+ G + +V I+ + E ++F+EE +++++ H L+++ G + +VT
Sbjct: 25 HLGYWLNKDKVAIKTIREGAMSE--EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVT 82
Query: 315 EWTNGGNVELWLSESAPSWKHR--LKVLIGVVEAMCYLQEQWPEVDY---DLRTGSVLLT 369
E+ G + +L + L + + V E M YL+E DL + L+
Sbjct: 83 EFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA----CVIHRDLAARNCLVG 138
Query: 370 DNLEPLISRF 379
+N +S F
Sbjct: 139 ENQVIKVSDF 148
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 54.7 bits (132), Expect = 4e-08
Identities = 19/144 (13%), Positives = 46/144 (31%), Gaps = 23/144 (15%)
Query: 21 NNCIHNPSLKYCNSSSPMDLNEIFKSTIVASHLCNESKNPNCVESFPKIDLRSRPKITPL 80
N + + L + L N V + + ++ L
Sbjct: 356 RNGLSFKGCCSQSDFGTTSLKYL--------DLSF-----NGVITMSS-NFLGLEQLEHL 401
Query: 81 YLSFN---FFWKYCPLG----IMSIDLSNNSLKGAFPIDVLL-CTQIQALDLSYNQLSGD 132
+ ++ ++ +D+S+ + + + ++ L ++ N +
Sbjct: 402 DFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRV-AFNGIFNGLSSLEVLKMAGNSFQEN 460
Query: 133 IPVESFSVLANLTFLNLSYNHFSE 156
+ F+ L NLTFL+LS +
Sbjct: 461 FLPDIFTELRNLTFLDLSQCQLEQ 484
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 52.8 bits (127), Expect = 2e-07
Identities = 23/124 (18%), Positives = 34/124 (27%), Gaps = 22/124 (17%)
Query: 75 PKITPLYLSFNFFWKYCP----------LGIMSIDLSNNSLKGAFPIDVLLCTQIQALDL 124
+ L LS N L +S+DLS N + ++ L L
Sbjct: 149 TNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNF-IQPGAFKEIRLHKLTL 207
Query: 125 SYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLHSGLFPGHHN 184
N S ++ LA L L F+ + G N
Sbjct: 208 RNNFDSLNVMKTCIQGLAGLEVHRLVLGE-----------FRNEGNLEKFDKSALEGLCN 256
Query: 185 YTIK 188
TI+
Sbjct: 257 LTIE 260
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 52.0 bits (125), Expect = 3e-07
Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 92 PLGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSY 151
P ++DLS N L+ ++Q LDLS ++ I ++ L++L+ L L+
Sbjct: 27 PFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQ-TIEDGAYQSLSHLSTLILTG 85
Query: 152 NHFSEM 157
N +
Sbjct: 86 NPIQSL 91
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 2e-06
Identities = 16/82 (19%), Positives = 32/82 (39%), Gaps = 3/82 (3%)
Query: 97 SIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSE 156
+ +L + ++ L++++N + E FS L NL L+LS N
Sbjct: 104 KLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 163
Query: 157 MKVSDTKFFQRFNSSSFLHSGL 178
+ +D + + L+ L
Sbjct: 164 IYCTD---LRVLHQMPLLNLSL 182
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 48.9 bits (117), Expect = 3e-06
Identities = 14/59 (23%), Positives = 21/59 (35%), Gaps = 4/59 (6%)
Query: 97 SIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFS 155
+ + P + L + LDLS+N L + SF L L+LS
Sbjct: 11 TYQCMELNFY-KIPDN--LPFSTKNLDLSFNPLR-HLGSYSFFSFPELQVLDLSRCEIQ 65
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 45.9 bits (109), Expect = 3e-05
Identities = 19/103 (18%), Positives = 35/103 (33%), Gaps = 10/103 (9%)
Query: 61 NCVESFPKIDLRSRPKITPLYLSFNFFWKYCPLGIMS-------IDLSNNSLKGAFPIDV 113
+ L ++ N F + I + +DLS L+
Sbjct: 431 THTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLE-QLSPTA 489
Query: 114 LL-CTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFS 155
+ +Q L+++ NQL +P F L +L + L N +
Sbjct: 490 FNSLSSLQVLNMASNQLKS-VPDGIFDRLTSLQKIWLHTNPWD 531
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535 | Back alignment and structure |
|---|
Score = 54.5 bits (131), Expect = 5e-08
Identities = 27/131 (20%), Positives = 58/131 (44%), Gaps = 13/131 (9%)
Query: 255 YKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVT 314
+ G TRV I+ K + F++E +++ + +H+ L+++ S IVT
Sbjct: 284 WMGTWNGTTRVAIKTLKPGTMS--PEAFLQEAQVMKKLRHEKLVQLYAV-VSEEPIYIVT 340
Query: 315 EWTNGGNVELWLSESAP---SWKHRLKVLIGVVEAMCYLQEQWPEVDY---DLRTGSVLL 368
E+ + G++ +L + + + M Y++ +Y DLR ++L+
Sbjct: 341 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM----NYVHRDLRAANILV 396
Query: 369 TDNLEPLISRF 379
+NL ++ F
Sbjct: 397 GENLVCKVADF 407
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283 | Back alignment and structure |
|---|
Score = 53.4 bits (129), Expect = 6e-08
Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 11/130 (8%)
Query: 255 YKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVT 314
G R V I++ K DEF+EE K+++ H+ L+++ G +R I+T
Sbjct: 41 KYGKWRGQYDVAIKMIKEGSMS--EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIIT 98
Query: 315 EWTNGGNVELWL--SESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDY---DLRTGSVLLT 369
E+ G + +L + L++ V EAM YL+ + + DL + L+
Sbjct: 99 EYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK----QFLHRDLAARNCLVN 154
Query: 370 DNLEPLISRF 379
D +S F
Sbjct: 155 DQGVVKVSDF 164
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268 | Back alignment and structure |
|---|
Score = 53.0 bits (128), Expect = 6e-08
Identities = 28/130 (21%), Positives = 54/130 (41%), Gaps = 11/130 (8%)
Query: 255 YKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVT 314
G + V +++ K E DEF +E + +++ H L++ G + IVT
Sbjct: 25 KLGKWKGQYDVAVKMIKEGSMSE--DEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVT 82
Query: 315 EWTNGGNVELWLSESAPSWKHR--LKVLIGVVEAMCYLQEQWPEVDY---DLRTGSVLLT 369
E+ + G + +L + L++ V E M +L+ + DL + L+
Sbjct: 83 EYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESH----QFIHRDLAARNCLVD 138
Query: 370 DNLEPLISRF 379
+L +S F
Sbjct: 139 RDLCVKVSDF 148
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 53.3 bits (129), Expect = 8e-08
Identities = 17/86 (19%), Positives = 38/86 (44%), Gaps = 8/86 (9%)
Query: 75 PKITPLYLSFNFFWKYCPLGIMS----IDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLS 130
K+T LY+ N L ++ + L+ +++ P+ L T++ +L+L N
Sbjct: 88 VKLTNLYIGTNKITDISALQNLTNLRELYLNEDNISDISPLANL--TKMYSLNLGANHNL 145
Query: 131 GDIPVESFSVLANLTFLNLSYNHFSE 156
D+ S + L +L ++ + +
Sbjct: 146 SDL--SPLSNMTGLNYLTVTESKVKD 169
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 48.3 bits (116), Expect = 3e-06
Identities = 17/90 (18%), Positives = 37/90 (41%), Gaps = 9/90 (10%)
Query: 75 PKITPLYLSFNFFWKYCPLGIMS----IDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLS 130
++ L + N PL +S +++ N + + L T+++ L++ NQ+S
Sbjct: 221 TRLNSLKIGNNKITDLSPLANLSQLTWLEIGTNQISDINAVKDL--TKLKMLNVGSNQIS 278
Query: 131 GDIPVESFSVLANLTFLNLSYNHFSEMKVS 160
+ + L+ L L L+ N +
Sbjct: 279 D---ISVLNNLSQLNSLFLNNNQLGNEDME 305
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 48.3 bits (116), Expect = 3e-06
Identities = 13/88 (14%), Positives = 34/88 (38%), Gaps = 9/88 (10%)
Query: 75 PKITPLYLSFNFFWKYCPLGIM----SIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLS 130
+ L ++ + P+ + S+ L+ N ++ P+ L T + NQ++
Sbjct: 155 TGLNYLTVTESKVKDVTPIANLTDLYSLSLNYNQIEDISPLASL--TSLHYFTAYVNQIT 212
Query: 131 GDIPVESFSVLANLTFLNLSYNHFSEMK 158
+ + + L L + N +++
Sbjct: 213 D---ITPVANMTRLNSLKIGNNKITDLS 237
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 47.9 bits (115), Expect = 3e-06
Identities = 14/85 (16%), Positives = 30/85 (35%), Gaps = 9/85 (10%)
Query: 78 TPLYLSFNFFWKYCPLG----IMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDI 133
L + P + L S+ + L I L ++ +++
Sbjct: 3 ATLATLPAPINQIFPDADLAEGIRAVLQKASVTDVVTQEEL--ESITKLVVAGEKVAS-- 58
Query: 134 PVESFSVLANLTFLNLSYNHFSEMK 158
++ L NL +LNL+ N +++
Sbjct: 59 -IQGIEYLTNLEYLNLNGNQITDIS 82
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 47.9 bits (115), Expect = 4e-06
Identities = 18/86 (20%), Positives = 34/86 (39%), Gaps = 9/86 (10%)
Query: 75 PKITPLYLSFNFFWKYCPLGIMS----IDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLS 130
+ N P+ M+ + + NN + P+ L +Q+ L++ NQ+S
Sbjct: 199 TSLHYFTAYVNQITDITPVANMTRLNSLKIGNNKITDLSPLANL--SQLTWLEIGTNQIS 256
Query: 131 GDIPVESFSVLANLTFLNLSYNHFSE 156
+ + L L LN+ N S+
Sbjct: 257 D---INAVKDLTKLKMLNVGSNQISD 279
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 47.5 bits (114), Expect = 5e-06
Identities = 15/86 (17%), Positives = 31/86 (36%), Gaps = 7/86 (8%)
Query: 75 PKITPLYLSFNFFWKYCPLG----IMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLS 130
K+ L + N L + S+ L+NN L + T + L LS N ++
Sbjct: 265 TKLKMLNVGSNQISDISVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHIT 324
Query: 131 GDIPVESFSVLANLTFLNLSYNHFSE 156
+ + L+ + + + +
Sbjct: 325 D---IRPLASLSKMDSADFANQVIKK 347
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 47.2 bits (113), Expect = 6e-06
Identities = 20/87 (22%), Positives = 37/87 (42%), Gaps = 10/87 (11%)
Query: 75 PKITPLYLSFNFFWKYC-PLGIMS----IDLSNNSLKGAFPIDVLLCTQIQALDLSYNQL 129
K+ L L N PL M+ + ++ + +K PI L T + +L L+YNQ+
Sbjct: 132 TKMYSLNLGANHNLSDLSPLSNMTGLNYLTVTESKVKDVTPIANL--TDLYSLSLNYNQI 189
Query: 130 SGDIPVESFSVLANLTFLNLSYNHFSE 156
+ + L +L + N ++
Sbjct: 190 ED---ISPLASLTSLHYFTAYVNQITD 213
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 46.8 bits (112), Expect = 8e-06
Identities = 17/88 (19%), Positives = 36/88 (40%), Gaps = 8/88 (9%)
Query: 75 PKITPLYLSFNFFWKYCPLGIM----SIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLS 130
+ LYL+ + PL + S++L N + T + L ++ +++
Sbjct: 110 TNLRELYLNEDNISDISPLANLTKMYSLNLGANHNLS-DLSPLSNMTGLNYLTVTESKVK 168
Query: 131 GDIPVESFSVLANLTFLNLSYNHFSEMK 158
V + L +L L+L+YN ++
Sbjct: 169 D---VTPIANLTDLYSLSLNYNQIEDIS 193
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 46.4 bits (111), Expect = 1e-05
Identities = 14/87 (16%), Positives = 32/87 (36%), Gaps = 9/87 (10%)
Query: 75 PKITPLYLSFNFFWKYCPLGIM----SIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLS 130
+ L + + ++ + I+ L T ++ L+L+ NQ++
Sbjct: 22 AEGIRAVLQKASVTDVVTQEELESITKLVVAGEKVASIQGIEYL--TNLEYLNLNGNQIT 79
Query: 131 GDIPVESFSVLANLTFLNLSYNHFSEM 157
+ S L LT L + N +++
Sbjct: 80 D---ISPLSNLVKLTNLYIGTNKITDI 103
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 46.4 bits (111), Expect = 1e-05
Identities = 16/87 (18%), Positives = 38/87 (43%), Gaps = 9/87 (10%)
Query: 75 PKITPLYLSFNFFWKYCPLGIMS----IDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLS 130
+ L L++N PL ++ N + P+ + T++ +L + N+++
Sbjct: 177 TDLYSLSLNYNQIEDISPLASLTSLHYFTAYVNQITDITPVANM--TRLNSLKIGNNKIT 234
Query: 131 GDIPVESFSVLANLTFLNLSYNHFSEM 157
+ + L+ LT+L + N S++
Sbjct: 235 D---LSPLANLSQLTWLEIGTNQISDI 258
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 45.2 bits (108), Expect = 3e-05
Identities = 8/65 (12%), Positives = 22/65 (33%), Gaps = 5/65 (7%)
Query: 94 GIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNH 153
G ++ + FP L + L ++ + L ++T L ++
Sbjct: 1 GAATLATLPAPINQIFPDADL--AEGIRAVLQKASVTDVVT---QEELESITKLVVAGEK 55
Query: 154 FSEMK 158
+ ++
Sbjct: 56 VASIQ 60
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 53.4 bits (129), Expect = 9e-08
Identities = 28/133 (21%), Positives = 54/133 (40%), Gaps = 12/133 (9%)
Query: 28 SLKYCNSSSPMDLNEIFKSTIVASHLCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFF 87
L + +N+IF T +A + N ++ + DL ++T L
Sbjct: 2 PLGSATITQDTPINQIFTDTALAEKMKTVLGKTNVTDTVSQTDL---DQVTTLQADRLGI 58
Query: 88 WKYCPLGIMS----IDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLAN 143
+ ++ I+ SNN L P+ L T++ + ++ NQ++ + + L N
Sbjct: 59 KSIDGVEYLNNLTQINFSNNQLTDITPLKNL--TKLVDILMNNNQIAD---ITPLANLTN 113
Query: 144 LTFLNLSYNHFSE 156
LT L L N ++
Sbjct: 114 LTGLTLFNNQITD 126
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 51.5 bits (124), Expect = 4e-07
Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 9/86 (10%)
Query: 75 PKITPLYLSFNFFWKYCPLGIMS----IDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLS 130
+T + S N PL ++ I ++NN + P+ L T + L L NQ++
Sbjct: 68 NNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANL--TNLTGLTLFNNQIT 125
Query: 131 GDIPVESFSVLANLTFLNLSYNHFSE 156
++ L NL L LS N S+
Sbjct: 126 D---IDPLKNLTNLNRLELSSNTISD 148
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 51.1 bits (123), Expect = 5e-07
Identities = 26/92 (28%), Positives = 37/92 (40%), Gaps = 9/92 (9%)
Query: 69 IDLRSRPKITPLYLSFNFFWKYCPLGIMS----IDLSNNSLKGAFPIDVLLCTQIQALDL 124
L K+T L L N PL ++ ++L+ N L+ PI L + L L
Sbjct: 259 APLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNL--KNLTYLTL 316
Query: 125 SYNQLSGDIPVESFSVLANLTFLNLSYNHFSE 156
+N +S PV S L L L N S+
Sbjct: 317 YFNNISDISPVSS---LTKLQRLFFYNNKVSD 345
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 49.2 bits (118), Expect = 2e-06
Identities = 19/82 (23%), Positives = 34/82 (41%), Gaps = 9/82 (10%)
Query: 75 PKITPLYLSFNFFWKYCPLG----IMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLS 130
K+ + ++ N PL + + L NN + P+ L T + L+LS N +S
Sbjct: 90 TKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNL--TNLNRLELSSNTIS 147
Query: 131 GDIPVESFSVLANLTFLNLSYN 152
+ + S L +L L+
Sbjct: 148 D---ISALSGLTSLQQLSFGNQ 166
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 48.4 bits (116), Expect = 3e-06
Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 9/87 (10%)
Query: 75 PKITPLYLSFNFFWKYCPLG----IMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLS 130
+ L +S N L + S+ +NN + P+ +L T + L L+ NQL
Sbjct: 177 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGIL--TNLDELSLNGNQLK 234
Query: 131 GDIPVESFSVLANLTFLNLSYNHFSEM 157
+ + + L NLT L+L+ N S +
Sbjct: 235 D---IGTLASLTNLTDLDLANNQISNL 258
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 48.0 bits (115), Expect = 4e-06
Identities = 26/86 (30%), Positives = 37/86 (43%), Gaps = 9/86 (10%)
Query: 75 PKITPLYLSFNFFWKYCPLGIMS----IDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLS 130
+ L + N PLGI++ + L+ N LK + L T + LDL+ NQ+S
Sbjct: 199 TNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASL--TNLTDLDLANNQIS 256
Query: 131 GDIPVESFSVLANLTFLNLSYNHFSE 156
+ S L LT L L N S
Sbjct: 257 N---LAPLSGLTKLTELKLGANQISN 279
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 47.3 bits (113), Expect = 8e-06
Identities = 20/96 (20%), Positives = 38/96 (39%), Gaps = 9/96 (9%)
Query: 69 IDLRSRPKITPLYLSFNFFWKYCPLGIMS----IDLSNNSLKGAFPIDVLLCTQIQALDL 124
+ + +T L L FN P+ ++ + NN + + L T I L
Sbjct: 303 SPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANL--TNINWLSA 360
Query: 125 SYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVS 160
+NQ+S + + L +T L L+ ++ V+
Sbjct: 361 GHNQISD---LTPLANLTRITQLGLNDQAWTNAPVN 393
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 45.3 bits (108), Expect = 4e-05
Identities = 12/63 (19%), Positives = 22/63 (34%), Gaps = 5/63 (7%)
Query: 95 IMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHF 154
M L ++ L Q+ L + ++ L NLT +N S N
Sbjct: 26 KMKTVLGKTNVTDTVSQTDL--DQVTTLQADRLGIKS---IDGVEYLNNLTQINFSNNQL 80
Query: 155 SEM 157
+++
Sbjct: 81 TDI 83
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 42.6 bits (101), Expect = 2e-04
Identities = 10/67 (14%), Positives = 20/67 (29%), Gaps = 6/67 (8%)
Query: 92 PLGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSY 151
PLG +I + + F L + L ++ + + L +T L
Sbjct: 2 PLGSATI-TQDTPINQIFTDTAL--AEKMKTVLGKTNVTDTVS---QTDLDQVTTLQADR 55
Query: 152 NHFSEMK 158
+
Sbjct: 56 LGIKSID 62
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 53.6 bits (129), Expect = 9e-08
Identities = 13/78 (16%), Positives = 30/78 (38%), Gaps = 1/78 (1%)
Query: 98 IDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEM 157
+ + L L +++ + + +++ +P L +L FL+LS N E
Sbjct: 291 LHIPQFYLFYDLSTVYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEE 349
Query: 158 KVSDTKFFQRFNSSSFLH 175
+ ++ + S L
Sbjct: 350 YLKNSACKGAWPSLQTLV 367
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 53.2 bits (128), Expect = 1e-07
Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 4/60 (6%)
Query: 97 SIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSE 156
D + S + P L +++LDLS+N+++ I ANL L L + +
Sbjct: 9 VCDGRSRSFT-SIPSG--LTAAMKSLDLSFNKIT-YIGHGDLRACANLQVLILKSSRINT 64
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 50.9 bits (122), Expect = 7e-07
Identities = 24/158 (15%), Positives = 47/158 (29%), Gaps = 10/158 (6%)
Query: 16 NSTIMNNCIHNPSLKYCNSSSPMDLNEIFKSTIVASHLCNESKNPNCVESFPKIDLRSRP 75
+ + + S L + NP+ + ++
Sbjct: 227 KLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETV 286
Query: 76 KITPLYLSFNFFWK-----YCPLG-IMSIDLSNNSLKGAFPIDVL-LCTQIQALDLSYNQ 128
I L++ + + Y L + I + N+ + P ++ LDLS N
Sbjct: 287 TIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENL 345
Query: 129 LSGDIPVES--FSVLANLTFLNLSYNHFSEMKVSDTKF 164
+ + S +L L LS NH M+ +
Sbjct: 346 MVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEIL 383
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 2e-06
Identities = 20/83 (24%), Positives = 32/83 (38%), Gaps = 7/83 (8%)
Query: 75 PKITPLYLSFNFFWKYCPLGIMS---IDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSG 131
+ L +S N L + + +S N LK P L + + +S NQL
Sbjct: 431 QTLEVLDVSNNNL-DSFSLFLPRLQELYISRNKLK-TLPDASLF-PVLLVMKISRNQLK- 486
Query: 132 DIPVESFSVLANLTFLNLSYNHF 154
+P F L +L + L N +
Sbjct: 487 SVPDGIFDRLTSLQKIWLHTNPW 509
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 48.2 bits (115), Expect = 5e-06
Identities = 22/108 (20%), Positives = 35/108 (32%), Gaps = 15/108 (13%)
Query: 61 NCVESFPKIDLRSRPKITPLYLSFNF-----FWKYCPLGIMS----IDLSNNSLKGAFPI 111
+ V P + + L LS N G + LS N L+ +
Sbjct: 320 SKVFLVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLR-SMQK 378
Query: 112 DVLLC---TQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSE 156
+ + +LD+S N +P +S + FLNLS
Sbjct: 379 TGEILLTLKNLTSLDISRNTFH-PMP-DSCQWPEKMRFLNLSSTGIRV 424
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 47.8 bits (114), Expect = 6e-06
Identities = 15/97 (15%), Positives = 31/97 (31%), Gaps = 10/97 (10%)
Query: 97 SIDLSNNSLKGAFPIDVLL--CTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHF 154
++L N + + L T +Q L + + +I F+ L +L L +
Sbjct: 102 YLNLMGNPYQ-TLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSL 160
Query: 155 SEMKVSDTKFFQ-------RFNSSSFLHSGLFPGHHN 184
+ K + + S+FL +
Sbjct: 161 RNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSS 197
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 45.9 bits (109), Expect = 3e-05
Identities = 15/123 (12%), Positives = 34/123 (27%), Gaps = 12/123 (9%)
Query: 61 NCVESFPKIDLRSRPKITPLYLSFNFFWKYCPLGIMS-------IDLSNNSLKGAFPIDV 113
N + S + L L N + + + + N
Sbjct: 84 NHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRID 143
Query: 114 LL-CTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSS 172
T + L++ L + +S + ++ L L + + + F +S
Sbjct: 144 FAGLTSLNELEIKALSLR-NYQSQSLKSIRDIHHLTLHLSESAFLLEI---FADILSSVR 199
Query: 173 FLH 175
+L
Sbjct: 200 YLE 202
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 45.5 bits (108), Expect = 3e-05
Identities = 23/125 (18%), Positives = 41/125 (32%), Gaps = 28/125 (22%)
Query: 75 PKITPLYLSFN--------FFWKYCPLGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSY 126
+T L +S N W P + ++LS+ ++ + ++ LD+S
Sbjct: 387 KNLTSLDISRNTFHPMPDSCQW---PEKMRFLNLSSTGIR-VVKTCIP--QTLEVLDVSN 440
Query: 127 NQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQ-------RFNSSSFLHSGLF 179
N L + L L L +S N + D F N + G+F
Sbjct: 441 NNLD-SFSLF----LPRLQELYISRNKLKT--LPDASLFPVLLVMKISRNQLKSVPDGIF 493
Query: 180 PGHHN 184
+
Sbjct: 494 DRLTS 498
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 43.2 bits (102), Expect = 2e-04
Identities = 18/90 (20%), Positives = 32/90 (35%), Gaps = 13/90 (14%)
Query: 75 PKITPLYLSFNFFWKYCPLGIM--------SIDLSNNSLKGAFPIDVLLCTQIQALDLSY 126
P + L LS N G + S+D+S N+ P +++ L+LS
Sbjct: 361 PSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSS 419
Query: 127 NQLSGDIPVESFSVLANLTFLNLSYNHFSE 156
+ + L L++S N+
Sbjct: 420 TGIR-VVKTCIPQ---TLEVLDVSNNNLDS 445
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 41.2 bits (97), Expect = 7e-04
Identities = 15/124 (12%), Positives = 33/124 (26%), Gaps = 9/124 (7%)
Query: 59 NPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCP------LGIMSIDLSNNSLKGAFPID 112
N +ID + L + Y I + L + I
Sbjct: 132 NVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIF 191
Query: 113 VLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSS 172
+ + ++ L+L L+ V + + S + +D F +
Sbjct: 192 ADILSSVRYLELRDTNLAR-FQFSPLPVDEVSSPMKKLAFRGSVL--TDESFNELLKLLR 248
Query: 173 FLHS 176
++
Sbjct: 249 YILE 252
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 52.7 bits (127), Expect = 1e-07
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Query: 99 DLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSE 156
++++SLK A ++ LDLS N LS I + L LNLS N E
Sbjct: 16 KVTDSSLKQALASLRQSAWNVKELDLSGNPLS-QISAADLAPFTKLELLNLSSNVLYE 72
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 49.2 bits (118), Expect = 1e-06
Identities = 20/104 (19%), Positives = 39/104 (37%), Gaps = 13/104 (12%)
Query: 61 NCVESFPKIDLRSRPKITPLYLSFNFFWKYCPLGIM--------SIDLSNNSLKGAFPID 112
N + +D R ++ L L N + ++L N +
Sbjct: 130 NKITMLRDLDEGCRSRVQYLDLKLNEI-DTVNFAELAASSDTLEHLNLQYNFIY-DVKGQ 187
Query: 113 VLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSE 156
V+ +++ LDLS N+L+ + F A +T+++L N
Sbjct: 188 VVF-AKLKTLDLSSNKLA-FMG-PEFQSAAGVTWISLRNNKLVL 228
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 47.7 bits (114), Expect = 4e-06
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 97 SIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSE 156
+DLS N L D+ T+++ L+LS N L L+ L L+L+ N+ E
Sbjct: 38 ELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYE---TLDLESLSTLRTLDLNNNYVQE 94
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 47.3 bits (113), Expect = 5e-06
Identities = 21/86 (24%), Positives = 34/86 (39%), Gaps = 5/86 (5%)
Query: 75 PKITPLYLSFNFFWKYCPLGIM----SIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLS 130
P I L+ + N +I L+NN + +D +++Q LDL N++
Sbjct: 99 PSIETLHAANNNI-SRVSCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEID 157
Query: 131 GDIPVESFSVLANLTFLNLSYNHFSE 156
E + L LNL YN +
Sbjct: 158 TVNFAELAASSDTLEHLNLQYNFIYD 183
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 47.3 bits (113), Expect = 6e-06
Identities = 18/102 (17%), Positives = 40/102 (39%), Gaps = 14/102 (13%)
Query: 61 NCVESFPKIDLRSRPKITPLYLSFNFFWKYCPLGIMS------IDLSNNSLKGAFPIDVL 114
+ ++ +S + L LS N + + ++LS+N L ++ L
Sbjct: 20 SSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLDLESL 79
Query: 115 LCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSE 156
+ ++ LDL+ N + V ++ L+ + N+ S
Sbjct: 80 --STLRTLDLNNNYVQ------ELLVGPSIETLHAANNNISR 113
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 2e-05
Identities = 16/84 (19%), Positives = 29/84 (34%), Gaps = 5/84 (5%)
Query: 97 SIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSE 156
++DLS+N L + + + L N+L I ++ NL +L N F
Sbjct: 195 TLDLSSNKLA-FMGPEFQSAAGVTWISLRNNKLV-LIE-KALRFSQNLEHFDLRGNGFHC 251
Query: 157 MKVSDTKFFQRFNSSSFLHSGLFP 180
+ FF + +
Sbjct: 252 --GTLRDFFSKNQRVQTVAKQTVK 273
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 4e-05
Identities = 7/40 (17%), Positives = 15/40 (37%), Gaps = 1/40 (2%)
Query: 117 TQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSE 156
+ + ++ + L N+ L+LS N S+
Sbjct: 10 NRYKIEKVTDSSLK-QALASLRQSAWNVKELDLSGNPLSQ 48
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613 | Back alignment and structure |
|---|
Score = 53.4 bits (128), Expect = 1e-07
Identities = 28/133 (21%), Positives = 56/133 (42%), Gaps = 13/133 (9%)
Query: 255 YKGILRDG---TRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRA 311
+G+ R V I++ K + +E + E +++ Q + ++R++G
Sbjct: 353 RQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGV-CQAEALM 411
Query: 312 IVTEWTNGGNVELWLSESAP--SWKHRLKVLIGVVEAMCYLQEQWPEVDY---DLRTGSV 366
+V E GG + +L + ++L V M YL+E+ ++ +L +V
Sbjct: 412 LVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK----NFVHRNLAARNV 467
Query: 367 LLTDNLEPLISRF 379
LL + IS F
Sbjct: 468 LLVNRHYAKISDF 480
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 53.7 bits (129), Expect = 1e-07
Identities = 30/172 (17%), Positives = 63/172 (36%), Gaps = 23/172 (13%)
Query: 7 NNLHPPPDFNSTIMNNCIHNPSLKYCNSSS---PMDLNEIFKSTI---------VASHLC 54
N+L+ + N N L+ + S +D+ F + I +A H+
Sbjct: 184 NSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIM 243
Query: 55 NESKNPNCVESFPKIDLRS--RPKITPLYLSFNFF-------WKYCPLGIMSIDLSNNSL 105
+ ++ + R + L LS F ++ + ++L+ N +
Sbjct: 244 GAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLK-DLKVLNLAYNKI 302
Query: 106 KGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEM 157
+Q L+LSYN L ++ +F L + +++L NH + +
Sbjct: 303 NKIADEAFYGLDNLQVLNLSYNLLG-ELYSSNFYGLPKVAYIDLQKNHIAII 353
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 53.3 bits (128), Expect = 1e-07
Identities = 33/159 (20%), Positives = 58/159 (36%), Gaps = 24/159 (15%)
Query: 14 DFNSTIMNNCIHNPSLKYCNSSSPMDLNEIFKSTIVASHL---CNESKNPNCVESFPKID 70
D + PS+ S L + K + A+ + N +N + + ++
Sbjct: 368 DLRDNALTTIHFIPSIPDIFLSG-NKLVTLPKINLTANLIHLSENRLENLDILYFLLRV- 425
Query: 71 LRSRPKITPLYLSFNFFWKYCPLG--------IMSIDLSNNSLKG----AFPIDVLLC-T 117
P + L L+ N F C + + L N L+ DV +
Sbjct: 426 ----PHLQILILNQNRFS-SCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLS 480
Query: 118 QIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSE 156
+Q L L++N L+ +P FS L L L+L+ N +
Sbjct: 481 HLQVLYLNHNYLN-SLPPGVFSHLTALRGLSLNSNRLTV 518
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 51.0 bits (122), Expect = 7e-07
Identities = 18/87 (20%), Positives = 33/87 (37%), Gaps = 3/87 (3%)
Query: 95 IMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHF 154
+ ++LS N L + + ++ +DL N ++ I ++F L L L+L N
Sbjct: 316 LQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIA-IIQDQTFKFLEKLQTLDLRDNAL 374
Query: 155 SEMKV--SDTKFFQRFNSSSFLHSGLF 179
+ + S F N L
Sbjct: 375 TTIHFIPSIPDIFLSGNKLVTLPKINL 401
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 50.6 bits (121), Expect = 1e-06
Identities = 15/61 (24%), Positives = 24/61 (39%)
Query: 97 SIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSE 156
+ LS N ++ Q+Q L+L I E+F L NL L+L +
Sbjct: 28 RLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYF 87
Query: 157 M 157
+
Sbjct: 88 L 88
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 50.6 bits (121), Expect = 1e-06
Identities = 22/95 (23%), Positives = 37/95 (38%), Gaps = 3/95 (3%)
Query: 70 DLRSRPKITPLYLSFNFFWKYCPLGI--MSIDLSNNSLKGAFPIDVLL-CTQIQALDLSY 126
+ P I ++LS N + + I LS N L+ + LL +Q L L+
Sbjct: 376 TIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLSENRLENLDILYFLLRVPHLQILILNQ 435
Query: 127 NQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSD 161
N+ S ++ S +L L L N ++
Sbjct: 436 NRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETE 470
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 49.4 bits (118), Expect = 2e-06
Identities = 26/125 (20%), Positives = 42/125 (33%), Gaps = 3/125 (2%)
Query: 97 SIDLSNNSLKGAFPIDVLLC--TQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHF 154
+ L L A D + LDLS NQ+ SF L +L ++ S N
Sbjct: 101 ELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQI 160
Query: 155 SEMKVSDTKFFQRFNSSSF-LHSGLFPGHHNYTIKAVILLVGFPIFVILMISCTGWLCFV 213
+ + + Q S F L + + + + IL +S GW +
Sbjct: 161 FLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDI 220
Query: 214 RPDFL 218
+F
Sbjct: 221 TGNFS 225
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 44.4 bits (105), Expect = 8e-05
Identities = 20/109 (18%), Positives = 37/109 (33%), Gaps = 16/109 (14%)
Query: 75 PKITPLYLSFNFFWKYCPLGIMS-----------IDLSNNSLKGAFPIDVLLC-TQIQAL 122
P + L+L N + + L++N L + P V T ++ L
Sbjct: 451 PSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLN-SLPPGVFSHLTALRGL 509
Query: 123 DLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSS 171
L+ N+L+ + ANL L++S N + +
Sbjct: 510 SLNSNRLT-VLSHNDL--PANLEILDISRNQLLAPNPDVFVSLSVLDIT 555
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 51.8 bits (125), Expect = 1e-07
Identities = 31/131 (23%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 255 YKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVT 314
+ G T+V ++ K D F+ E L+ Q QH+ L+R+ ++ I+T
Sbjct: 30 WMGYYNGHTKVAVKSLKQGSMS--PDAFLAEANLMKQLQHQRLVRLYA-VVTQEPIYIIT 86
Query: 315 EWTNGGNVELWLSE---SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDY---DLRTGSVLL 368
E+ G++ +L + L + + E M +++E+ +Y DLR ++L+
Sbjct: 87 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER----NYIHRDLRAANILV 142
Query: 369 TDNLEPLISRF 379
+D L I+ F
Sbjct: 143 SDTLSCKIADF 153
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 52.5 bits (126), Expect = 2e-07
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Query: 99 DLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSE 156
++++SLK A ++ LDLS N LS I + L LNLS N E
Sbjct: 16 KVTDSSLKQALASLRQSAWNVKELDLSGNPLS-QISAADLAPFTKLELLNLSSNVLYE 72
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 51.0 bits (122), Expect = 6e-07
Identities = 18/102 (17%), Positives = 40/102 (39%), Gaps = 14/102 (13%)
Query: 61 NCVESFPKIDLRSRPKITPLYLSFNFFWKYCPLGIMS------IDLSNNSLKGAFPIDVL 114
+ ++ +S + L LS N + + ++LS+N L ++ L
Sbjct: 20 SSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLDLESL 79
Query: 115 LCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSE 156
+ ++ LDL+ N + V ++ L+ + N+ S
Sbjct: 80 --STLRTLDLNNNYVQ------ELLVGPSIETLHAANNNISR 113
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 49.8 bits (119), Expect = 1e-06
Identities = 20/104 (19%), Positives = 39/104 (37%), Gaps = 13/104 (12%)
Query: 61 NCVESFPKIDLRSRPKITPLYLSFNF--------FWKYCPLGIMSIDLSNNSLKGAFPID 112
N + +D R ++ L L N + ++L N +
Sbjct: 130 NKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDT-LEHLNLQYNFIY-DVKGQ 187
Query: 113 VLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSE 156
V+ +++ LDLS N+L+ + F A +T+++L N
Sbjct: 188 VVF-AKLKTLDLSSNKLA-FMG-PEFQSAAGVTWISLRNNKLVL 228
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 49.5 bits (118), Expect = 2e-06
Identities = 21/86 (24%), Positives = 34/86 (39%), Gaps = 5/86 (5%)
Query: 75 PKITPLYLSFNFFWKYCPLGIM----SIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLS 130
P I L+ + N +I L+NN + +D +++Q LDL N++
Sbjct: 99 PSIETLHAANNNI-SRVSCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEID 157
Query: 131 GDIPVESFSVLANLTFLNLSYNHFSE 156
E + L LNL YN +
Sbjct: 158 TVNFAELAASSDTLEHLNLQYNFIYD 183
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 46.0 bits (109), Expect = 2e-05
Identities = 14/59 (23%), Positives = 24/59 (40%), Gaps = 3/59 (5%)
Query: 97 SIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFS 155
++DLS+N L + + + L N+L I ++ NL +L N F
Sbjct: 195 TLDLSSNKLA-FMGPEFQSAAGVTWISLRNNKLV-LIE-KALRFSQNLEHFDLRGNGFH 250
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 44.8 bits (106), Expect = 4e-05
Identities = 7/43 (16%), Positives = 15/43 (34%), Gaps = 1/43 (2%)
Query: 114 LLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSE 156
+ + ++ + L N+ L+LS N S+
Sbjct: 7 QNGNRYKIEKVTDSSLK-QALASLRQSAWNVKELDLSGNPLSQ 48
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281 | Back alignment and structure |
|---|
Score = 51.9 bits (125), Expect = 2e-07
Identities = 26/134 (19%), Positives = 56/134 (41%), Gaps = 14/134 (10%)
Query: 255 YKGILRDG----TRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTR 310
++GI V I+ K S +R++F++E + QF H ++++++G +
Sbjct: 32 HQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGV-ITENPV 90
Query: 311 AIVTEWTNGGNVELWLSESAPSWKHR--LKVLIGVVEAMCYLQEQWPEVDY---DLRTGS 365
I+ E G + +L S + + A+ YL+ + + D+ +
Sbjct: 91 WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK----RFVHRDIAARN 146
Query: 366 VLLTDNLEPLISRF 379
VL++ N + F
Sbjct: 147 VLVSSNDCVKLGDF 160
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287 | Back alignment and structure |
|---|
Score = 51.5 bits (124), Expect = 2e-07
Identities = 26/126 (20%), Positives = 53/126 (42%), Gaps = 13/126 (10%)
Query: 255 YKGILRDG---TRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRA 311
+G+ R V I++ K + +E + E +++ Q + ++R++G
Sbjct: 27 RQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGV-CQAEALM 85
Query: 312 IVTEWTNGGNVELWLSESAP--SWKHRLKVLIGVVEAMCYLQEQWPEVDY---DLRTGSV 366
+V E GG + +L + ++L V M YL+E+ ++ DL +V
Sbjct: 86 LVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK----NFVHRDLAARNV 141
Query: 367 LLTDNL 372
LL +
Sbjct: 142 LLVNRH 147
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278 | Back alignment and structure |
|---|
Score = 51.1 bits (123), Expect = 3e-07
Identities = 45/216 (20%), Positives = 83/216 (38%), Gaps = 56/216 (25%)
Query: 255 YKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGW-NNSRRTRAIV 313
G R G +V ++ K D + + F+ E ++ Q +H NL+++LG + IV
Sbjct: 38 MLGDYR-GNKVAVKCIKNDATAQ---AFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV 93
Query: 314 TEWTNGGNVELWL---SESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDY---DLRTGSVL 367
TE+ G++ +L S LK + V EAM YL+ ++ DL +VL
Sbjct: 94 TEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN----NFVHRDLAARNVL 149
Query: 368 LTDNLEPLISRF----KIEYQHRSTKY--------------------VYKFGLFLLEMIT 403
++++ +S F + + K V+ FG+ L E+ +
Sbjct: 150 VSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 209
Query: 404 ----------NRRPLEEFERGEAGFIEYIRMHYPEN 429
+ + E+G +M P+
Sbjct: 210 FGRVPYPRIPLKDVVPRVEKGY-------KMDAPDG 238
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 52.0 bits (125), Expect = 3e-07
Identities = 16/65 (24%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Query: 92 PLGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSY 151
P +DL N +K + ++ L+L+ N +S + +F+ L NL L L
Sbjct: 31 PTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVS-AVEPGAFNNLFNLRTLGLRS 89
Query: 152 NHFSE 156
N
Sbjct: 90 NRLKL 94
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 50.9 bits (122), Expect = 5e-07
Identities = 21/103 (20%), Positives = 38/103 (36%), Gaps = 9/103 (8%)
Query: 61 NCVESFPKIDLRSRPKITPLYLSFNFF-------WKYCPLGIMSIDLSNNSLKGAFPIDV 113
+ S P L + L L +K + +++S+ +
Sbjct: 162 CNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLY-RLKVLEISHWPYLDTMTPNC 220
Query: 114 LLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSE 156
L + +L +++ L+ +P + L L FLNLSYN S
Sbjct: 221 LYGLNLTSLSITHCNLT-AVPYLAVRHLVYLRFLNLSYNPIST 262
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 48.2 bits (115), Expect = 4e-06
Identities = 14/67 (20%), Positives = 27/67 (40%), Gaps = 4/67 (5%)
Query: 91 CPLGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLS 150
C ++ A P + T+ + LDL N++ + + F+ +L L L+
Sbjct: 9 CSAQDRAVLCHRKRFV-AVPEG--IPTETRLLDLGKNRIK-TLNQDEFASFPHLEELELN 64
Query: 151 YNHFSEM 157
N S +
Sbjct: 65 ENIVSAV 71
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 47.4 bits (113), Expect = 8e-06
Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 19/94 (20%)
Query: 75 PKITPLYLSFNF--------FWKYCPLGIMSIDLSNNSLK----GAFPIDVLLCTQIQAL 122
+ L L N F + L ++L+ N + GAF ++ L
Sbjct: 32 TETRLLDLGKNRIKTLNQDEFASFPHL--EELELNENIVSAVEPGAFN----NLFNLRTL 85
Query: 123 DLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSE 156
L N+L IP+ F+ L+NLT L++S N
Sbjct: 86 GLRSNRLK-LIPLGVFTGLSNLTKLDISENKIVI 118
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 44.3 bits (105), Expect = 7e-05
Identities = 17/88 (19%), Positives = 35/88 (39%), Gaps = 8/88 (9%)
Query: 70 DLRSRPKITPLYLSFNFFWKYCPLGIMSIDLSNNSLKGAFPIDVLL-CTQIQALDLSYNQ 128
++ P + ++ N L + S+ +++ +L A P + ++ L+LSYN
Sbjct: 206 EISHWPYLD--TMTPNCL---YGLNLTSLSITHCNLT-AVPYLAVRHLVYLRFLNLSYNP 259
Query: 129 LSGDIPVESFSVLANLTFLNLSYNHFSE 156
+S I L L + L +
Sbjct: 260 IS-TIEGSMLHELLRLQEIQLVGGQLAV 286
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 43.9 bits (104), Expect = 8e-05
Identities = 15/64 (23%), Positives = 27/64 (42%), Gaps = 9/64 (14%)
Query: 97 SIDLSNNSLK----GAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYN 152
+D+S N + F L +++L++ N L I +FS L +L L L
Sbjct: 108 KLDISENKIVILLDYMF--QDL--YNLKSLEVGDNDLV-YISHRAFSGLNSLEQLTLEKC 162
Query: 153 HFSE 156
+ +
Sbjct: 163 NLTS 166
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 43.6 bits (103), Expect = 1e-04
Identities = 14/63 (22%), Positives = 25/63 (39%), Gaps = 9/63 (14%)
Query: 97 SIDLSNNSLK----GAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYN 152
++LS N + ++Q + L QL+ + +F L L LN+S N
Sbjct: 252 FLNLSYNPISTIEGSML----HELLRLQEIQLVGGQLA-VVEPYAFRGLNYLRVLNVSGN 306
Query: 153 HFS 155
+
Sbjct: 307 QLT 309
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 50.0 bits (120), Expect = 3e-07
Identities = 13/90 (14%), Positives = 36/90 (40%), Gaps = 7/90 (7%)
Query: 75 PKITPLYLSFNFFWKYCPLGIM----SIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLS 130
+T + L+ + + ++N PI L + ++ L + ++
Sbjct: 44 NSLTYITLANINVTDLTGIEYAHNIKDLTINNIHATNYNPISGL--SNLERLRIMGKDVT 101
Query: 131 GDIPVESFSVLANLTFLNLSYNHFSEMKVS 160
+ + S L +LT L++S++ + ++
Sbjct: 102 -SDKIPNLSGLTSLTLLDISHSAHDDSILT 130
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 48.0 bits (115), Expect = 1e-06
Identities = 14/82 (17%), Positives = 32/82 (39%), Gaps = 5/82 (6%)
Query: 75 PKITPLYLSFNFFWKYCPLGIM----SIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLS 130
I L ++ Y P+ + + + + ++ T + LD+S++
Sbjct: 66 HNIKDLTINNIHATNYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHD 125
Query: 131 GDIPVESFSVLANLTFLNLSYN 152
D + + L + ++LSYN
Sbjct: 126 -DSILTKINTLPKVNSIDLSYN 146
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 43.0 bits (102), Expect = 7e-05
Identities = 12/65 (18%), Positives = 26/65 (40%), Gaps = 5/65 (7%)
Query: 97 SIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSE 156
I L+N ++ I+ I+ L ++ + + S L+NL L + +
Sbjct: 48 YITLANINVTDLTGIEYA--HNIKDLTINNIHAT-NY--NPISGLSNLERLRIMGKDVTS 102
Query: 157 MKVSD 161
K+ +
Sbjct: 103 DKIPN 107
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 2e-04
Identities = 13/62 (20%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Query: 97 SIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSE 156
+D+S+++ + + ++ ++DLSYN DI L L LN+ ++ +
Sbjct: 116 LLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDI--MPLKTLPELKSLNIQFDGVHD 173
Query: 157 MK 158
+
Sbjct: 174 YR 175
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 51.3 bits (123), Expect = 4e-07
Identities = 23/107 (21%), Positives = 38/107 (35%), Gaps = 3/107 (2%)
Query: 51 SHLCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCPLGIMSIDLSNNSLKGAFP 110
+K + + S S F G+ + DLS + + A
Sbjct: 233 FDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIF-ALL 291
Query: 111 IDVLL-CTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSE 156
V T ++ L L+ N+++ I +F L +L LNLS N
Sbjct: 292 KSVFSHFTDLEQLTLAQNEIN-KIDDNAFWGLTHLLKLNLSQNFLGS 337
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 51.3 bits (123), Expect = 4e-07
Identities = 17/65 (26%), Positives = 26/65 (40%)
Query: 92 PLGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSY 151
P + +DLS NS+ +Q L + I +F L++L L L Y
Sbjct: 29 PAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDY 88
Query: 152 NHFSE 156
N F +
Sbjct: 89 NQFLQ 93
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 47.8 bits (114), Expect = 6e-06
Identities = 27/148 (18%), Positives = 49/148 (33%), Gaps = 22/148 (14%)
Query: 21 NNCIHNPSLKYCNSSSPMDLNEIFKSTIVASHLCNESKNPNCVESFPKIDLR--SRPKIT 78
N + + ++ ++ + + + S S+ S + + +
Sbjct: 222 NGFKESMAKRFFDAIAGTKIQSLILSN---SYNMGSSFGHTNFKDPDNFTFKGLEASGVK 278
Query: 79 PLYLSFNFFWKYCPLGI-------MSIDLSNNSLK----GAFPIDVLLCTQIQALDLSYN 127
LS + + + + L+ N + AF L T + L+LS N
Sbjct: 279 TCDLSKSKIFAL-LKSVFSHFTDLEQLTLAQNEINKIDDNAF--WGL--THLLKLNLSQN 333
Query: 128 QLSGDIPVESFSVLANLTFLNLSYNHFS 155
L I F L L L+LSYNH
Sbjct: 334 FLG-SIDSRMFENLDKLEVLDLSYNHIR 360
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 47.0 bits (112), Expect = 9e-06
Identities = 20/97 (20%), Positives = 37/97 (38%), Gaps = 7/97 (7%)
Query: 61 NCVESFPKIDLRSRPKITPLYLSFNFFWKYCPLGIMSIDLSNNSLKGAFPIDVLLCTQIQ 120
+ D + KI L LS ++ D N + KG L + ++
Sbjct: 225 KESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKG------LEASGVK 278
Query: 121 ALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEM 157
DLS +++ + FS +L L L+ N +++
Sbjct: 279 TCDLSKSKIF-ALLKSVFSHFTDLEQLTLAQNEINKI 314
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 44.7 bits (106), Expect = 5e-05
Identities = 22/115 (19%), Positives = 36/115 (31%), Gaps = 15/115 (13%)
Query: 75 PKITPLYLSFN--------FFWKYCPLGIMSIDLSNNSLKGAF-PIDVLLC-TQIQALDL 124
+ L L +N F L + L+ +L GA + T ++ L L
Sbjct: 79 SSLIILKLDYNQFLQLETGAFNGLANLE--VLTLTQCNLDGAVLSGNFFKPLTSLEMLVL 136
Query: 125 SYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLHSGLF 179
N + P F + L+L++N + D F F L
Sbjct: 137 RDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEED---LLNFQGKHFTLLRLS 188
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 44.4 bits (105), Expect = 7e-05
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 9/60 (15%)
Query: 97 SIDLSNNSLK----GAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYN 152
++LS N L F + L +++ LDLSYN + + +SF L NL L L N
Sbjct: 327 KLNLSQNFLGSIDSRMF--ENL--DKLEVLDLSYNHIRA-LGDQSFLGLPNLKELALDTN 381
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 41.3 bits (97), Expect = 5e-04
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Query: 98 IDLSNNSLKGAFPIDVLL-CTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHF 154
+DLS N ++ A L ++ L L NQL +P F L +L + L N +
Sbjct: 352 LDLSYNHIR-ALGDQSFLGLPNLKELALDTNQLK-SVPDGIFDRLTSLQKIWLHTNPW 407
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298 | Back alignment and structure |
|---|
Score = 50.7 bits (122), Expect = 4e-07
Identities = 20/106 (18%), Positives = 41/106 (38%), Gaps = 7/106 (6%)
Query: 255 YKGILRDG----TRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGW-NNSRRT 309
Y G L D ++ +F+ E ++ F H N++ +LG S +
Sbjct: 42 YHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGS 101
Query: 310 RAIVTEWTNGGNVELWL--SESAPSWKHRLKVLIGVVEAMCYLQEQ 353
+V + G++ ++ P+ K + + V + M YL +
Sbjct: 102 PLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK 147
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373 | Back alignment and structure |
|---|
Score = 50.9 bits (122), Expect = 5e-07
Identities = 17/106 (16%), Positives = 40/106 (37%), Gaps = 7/106 (6%)
Query: 255 YKGILRDG----TRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGW-NNSRRT 309
Y G L D ++ +F+ E ++ F H N++ +LG S +
Sbjct: 106 YHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGS 165
Query: 310 RAIVTEWTNGGNVELWLSESAPSWKHR--LKVLIGVVEAMCYLQEQ 353
+V + G++ ++ + + + + V + M +L +
Sbjct: 166 PLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK 211
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318 | Back alignment and structure |
|---|
Score = 50.4 bits (121), Expect = 5e-07
Identities = 26/128 (20%), Positives = 48/128 (37%), Gaps = 14/128 (10%)
Query: 255 YKGILRD-----GTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLG--WNNSR 307
G V ++ K D + R + +E +L H+++I+ G +
Sbjct: 48 SLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGA 107
Query: 308 RTRAIVTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDY---DLRTG 364
+ +V E+ G++ +L + L + E M YL Q Y DL
Sbjct: 108 ASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQ----HYIHRDLAAR 163
Query: 365 SVLLTDNL 372
+VLL ++
Sbjct: 164 NVLLDNDR 171
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 50.5 bits (121), Expect = 5e-07
Identities = 31/128 (24%), Positives = 50/128 (39%), Gaps = 26/128 (20%)
Query: 75 PKITPLYLSFN--------FFWKYCPLGIMSIDLSNNSLK----GAFPIDVLLCTQIQAL 122
+ L LS N + L ++ L++N + +F L ++ L
Sbjct: 52 EAVKSLDLSNNRITYISNSDLQRCVNL--QALVLTSNGINTIEEDSF--SSL--GSLEHL 105
Query: 123 DLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLHSGLFPGH 182
DLSYN LS ++ F L++LTFLNL N + + +T F L G
Sbjct: 106 DLSYNYLS-NLSSSWFKPLSSLTFLNLLGNPYKT--LGETSLFSHLTKLQILRVG----- 157
Query: 183 HNYTIKAV 190
+ T +
Sbjct: 158 NMDTFTKI 165
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 46.7 bits (111), Expect = 1e-05
Identities = 16/60 (26%), Positives = 26/60 (43%), Gaps = 4/60 (6%)
Query: 97 SIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSE 156
S+ SL + P L +++LDLS N+++ I NL L L+ N +
Sbjct: 35 ICKGSSGSLN-SIPSG--LTEAVKSLDLSNNRIT-YISNSDLQRCVNLQALVLTSNGINT 90
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 43.6 bits (103), Expect = 1e-04
Identities = 9/65 (13%), Positives = 21/65 (32%), Gaps = 3/65 (4%)
Query: 97 SIDLSNNSLKGAFPIDVLL-CTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFS 155
+++ + L+ ++ L + L L Q + V +++ L L
Sbjct: 178 ELEIDASDLQ-SYEPKSLKSIQNVSHLILHMKQHI-LLLEIFVDVTSSVECLELRDTDLD 235
Query: 156 EMKVS 160
S
Sbjct: 236 TFHFS 240
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 42.4 bits (100), Expect = 2e-04
Identities = 12/89 (13%), Positives = 26/89 (29%), Gaps = 9/89 (10%)
Query: 75 PKITPLYLSFNFFWKYCPLGI-------MSIDLSNNSLKGAFPIDVLL-CTQIQALDLSY 126
+T L L N + + + + N T ++ L++
Sbjct: 124 SSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDA 183
Query: 127 NQLSGDIPVESFSVLANLTFLNLSYNHFS 155
+ L +S + N++ L L
Sbjct: 184 SDLQ-SYEPKSLKSIQNVSHLILHMKQHI 211
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 41.6 bits (98), Expect = 3e-04
Identities = 15/73 (20%), Positives = 29/73 (39%), Gaps = 4/73 (5%)
Query: 82 LSFNFFWKYCPLGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVL 141
N K ++ +++ SL + + + + L+ S NQL +P F L
Sbjct: 245 GETNSLIKKFTF--RNVKITDESLFQVMKLLNQI-SGLLELEFSRNQLKS-VPDGIFDRL 300
Query: 142 ANLTFLNLSYNHF 154
+L + L N +
Sbjct: 301 TSLQKIWLHTNPW 313
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656 | Back alignment and structure |
|---|
Score = 51.0 bits (122), Expect = 6e-07
Identities = 26/134 (19%), Positives = 56/134 (41%), Gaps = 14/134 (10%)
Query: 255 YKGILRDG----TRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTR 310
++GI V I+ K S +R++F++E + QF H ++++++G +
Sbjct: 407 HQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGV-ITENPV 465
Query: 311 AIVTEWTNGGNVELWLSESAPSWKHR--LKVLIGVVEAMCYLQEQWPEVDY---DLRTGS 365
I+ E G + +L S + + A+ YL+ + + D+ +
Sbjct: 466 WIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK----RFVHRDIAARN 521
Query: 366 VLLTDNLEPLISRF 379
VL++ N + F
Sbjct: 522 VLVSSNDCVKLGDF 535
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 7e-07
Identities = 22/87 (25%), Positives = 35/87 (40%), Gaps = 16/87 (18%)
Query: 78 TPLYLSFNFFWKYCPLGIMS-------IDLSNNSLK----GAFPIDVLLCTQIQALDLSY 126
L L+ N F GI I+ SNN + GAF + + + + L+
Sbjct: 35 AELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAF--EGA--SGVNEILLTS 90
Query: 127 NQLSGDIPVESFSVLANLTFLNLSYNH 153
N+L ++ + F L +L L L N
Sbjct: 91 NRLE-NVQHKMFKGLESLKTLMLRSNR 116
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 42.7 bits (101), Expect = 1e-04
Identities = 12/62 (19%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Query: 92 PLGIMSIDLSNNSLKGAFPIDVLL-CTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLS 150
P + L+NN + Q++ ++ S N+++ DI +F + + + L+
Sbjct: 31 PQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKIT-DIEEGAFEGASGVNEILLT 89
Query: 151 YN 152
N
Sbjct: 90 SN 91
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 42.7 bits (101), Expect = 1e-04
Identities = 14/61 (22%), Positives = 29/61 (47%), Gaps = 9/61 (14%)
Query: 99 DLSNNSLK----GAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHF 154
L++N L+ F L ++ L L N+++ + +SF L+++ L+L N
Sbjct: 87 LLTSNRLENVQHKMF--KGL--ESLKTLMLRSNRIT-CVGNDSFIGLSSVRLLSLYDNQI 141
Query: 155 S 155
+
Sbjct: 142 T 142
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 51.0 bits (121), Expect = 8e-07
Identities = 81/579 (13%), Positives = 164/579 (28%), Gaps = 188/579 (32%)
Query: 10 HPPPDFNSTIMNNCIHNPSLKYCNSSSPMDLNEIFKSTIVASHLCNESKNPNCVESFPK- 68
H DF + +Y D+ +F+ V + C + V+ PK
Sbjct: 4 HHHMDFETGEH---------QYQYK----DILSVFEDAFVDNFDCKD------VQDMPKS 44
Query: 69 ------ID--LRSRPKITPLYLSFNFFWKYCPLGIMSIDLSNNSLKGAFPIDVL------ 114
ID + S+ ++ FW + F +VL
Sbjct: 45 ILSKEEIDHIIMSKDAVSGTLR---LFWTLL--------SKQEEMVQKFVEEVLRINYKF 93
Query: 115 LCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNH---FSEMKVSDTKFFQRFNSS 171
L + I+ Q S + + YN F++ VS + + +
Sbjct: 94 LMSPIKT---EQRQPSM--MTRMYI-----EQRDRLYNDNQVFAKYNVSRLQPYLK---- 139
Query: 172 SFLHSGLF---PGHHNYTI-------KAVILLV-------------GFPIFVILMISCTG 208
L L P N I K + F IF
Sbjct: 140 --LRQALLELRP-AKNVLIDGVLGSGKTW--VALDVCLSYKVQCKMDFKIF--------- 185
Query: 209 WLCF---VRPDFLPRMLRR-NHKFTTWMLKAATNGFSKKNLVGKNEGAAIYKGILRDGTR 264
WL P+ + ML++ ++ + + + K + + A + +L+
Sbjct: 186 WLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIK--LRIHSIQAELRRLLKS--- 240
Query: 265 VKIEIYKG------DV-SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEW- 316
+ Y+ +V + + + F CK+L+ + K + L +
Sbjct: 241 ---KPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMT 297
Query: 317 -TNGGNVEL---WLSESAPSWKHRLK----VLIGVVEAMCYLQ------EQWPEVDYDLR 362
T L +L + + ++ ++ + W V+ D
Sbjct: 298 LTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAES--IRDGLATWDNWKHVNCDKL 355
Query: 363 TGSVLLT-DNLEPLISRFKIEYQHRSTKYVYKFGLF---------LLEMITNRRPLEEFE 412
T + + + LEP EY+ + + +F LL +I +
Sbjct: 356 TTIIESSLNVLEPA------EYRKM---F-DRLSVFPPSAHIPTILLSLIWFDVIKSD-- 403
Query: 413 RGEAGFIEYIRMHYPENLQLVVDE---RMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSL 469
+ +VV++ ++ + E + + + KL +
Sbjct: 404 -----------------VMVVVNKLHKYSLVEK---QPKESTISI-PSIYLELKVKLENE 442
Query: 470 VQIYNMITRAYKSCPILTSENHRKSHADG------GHGH 502
++ I Y S++ + D GH H
Sbjct: 443 YALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGH-H 480
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 50.1 bits (120), Expect = 1e-06
Identities = 20/98 (20%), Positives = 39/98 (39%), Gaps = 11/98 (11%)
Query: 68 KIDLRSRPKITPLYLSFNFFWKYCPLGIM----SIDLSNNSLKGAFPIDVLLCTQIQALD 123
+ID+ ++T L N + ++D S N + +DV + L+
Sbjct: 141 EIDVSHNTQLTELDCHLNKKITKLDVTPQTQLTTLDCSFNKITE---LDVSQNKLLNRLN 197
Query: 124 LSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSD 161
N ++ + + LTFL+ S N +E+ V+
Sbjct: 198 CDTNNIT-KLD---LNQNIQLTFLDCSSNKLTEIDVTP 231
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 2e-06
Identities = 23/108 (21%), Positives = 46/108 (42%), Gaps = 12/108 (11%)
Query: 69 IDLRSRPKITPLYLSFNFFWKYCPLG----IMSIDLSNNSLKGAFPIDVLLCTQIQALDL 124
+D+ + ++T L SFN + + ++ N++ +D+ Q+ LD
Sbjct: 164 LDVTPQTQLTTLDCSFNKI-TELDVSQNKLLNRLNCDTNNITK---LDLNQNIQLTFLDC 219
Query: 125 SYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSS 172
S N+L+ +I V + LT+ + S N +E+ VS +
Sbjct: 220 SSNKLT-EIDVTPLT---QLTYFDCSVNPLTELDVSTLSKLTTLHCIQ 263
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 5e-06
Identities = 23/97 (23%), Positives = 39/97 (40%), Gaps = 11/97 (11%)
Query: 69 IDLRSRPKITPLYLSFNFFWKYCPLGIMS----IDLSNNSLKGAFPIDVLLCTQIQALDL 124
+D+ K+T L N + ++ + N+L IDV TQ+ LD
Sbjct: 100 LDVTPLTKLTYLNCDTNKL-TKLDVSQNPLLTYLNCARNTLT---EIDVSHNTQLTELDC 155
Query: 125 SYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSD 161
N+ + + LT L+ S+N +E+ VS
Sbjct: 156 HLNKKITKLD---VTPQTQLTTLDCSFNKITELDVSQ 189
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 47.8 bits (114), Expect = 5e-06
Identities = 17/96 (17%), Positives = 39/96 (40%), Gaps = 11/96 (11%)
Query: 69 IDLRSRPKITPLYLSFNFFWKYCPLGIMS----IDLSNNSLKGAFPIDVLLCTQIQALDL 124
I +T L + + ++ + ++N++ +D+ T + L
Sbjct: 36 ISEEQLATLTSLDCHNSSITDMTGIEKLTGLTKLICTSNNITT---LDLSQNTNLTYLAC 92
Query: 125 SYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVS 160
N+L+ ++ + L LT+LN N +++ VS
Sbjct: 93 DSNKLT-NLD---VTPLTKLTYLNCDTNKLTKLDVS 124
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 3e-05
Identities = 21/103 (20%), Positives = 43/103 (41%), Gaps = 21/103 (20%)
Query: 68 KIDLRSRPKITPLYLSFNFFWKYCPLGIMSIDLSNNS---------LKGAFPIDVLLCTQ 118
++D+ + K+T L+ ++ IDL++N+ + +DV TQ
Sbjct: 247 ELDVSTLSKLTTLHCIQT--------DLLEIDLTHNTQLIYFQAEGCRKIKELDVTHNTQ 298
Query: 119 IQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSD 161
+ LD ++ ++ S L +L L+ +E+ VS
Sbjct: 299 LYLLDCQAAGIT-ELD---LSQNPKLVYLYLNNTELTELDVSH 337
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 41.2 bits (97), Expect = 7e-04
Identities = 14/99 (14%), Positives = 29/99 (29%), Gaps = 11/99 (11%)
Query: 67 PKIDLRSRPKITPLYLSFNFFWKYCPLGIMS----IDLSNNSLKGAFPIDVLLCTQIQAL 122
++D+ ++ L L + L+N L +DV T++++L
Sbjct: 289 KELDVTHNTQLYLLDCQAAGI-TELDLSQNPKLVYLYLNNTELTE---LDVSHNTKLKSL 344
Query: 123 DLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSD 161
+ D S + L + M
Sbjct: 345 SCVNAHIQ-DFS--SVGKIPALNNNFEAEGQTITMPKET 380
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 50.2 bits (120), Expect = 1e-06
Identities = 24/165 (14%), Positives = 49/165 (29%), Gaps = 14/165 (8%)
Query: 4 EDLNNLHPPPDFNSTIMNNCIHNPSLKYCNSSSP---MDLNEIFKSTIVASHLCNESKNP 60
ED + N + N +L ++ L ++ +T+ + N
Sbjct: 202 EDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQG 261
Query: 61 NCVESFPKIDLRSRPKITPLYLSFN--------FFWKYCPLGIMSIDLSNNSLKGAFPID 112
S ++ + + + + + I + +S +
Sbjct: 262 QLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPS 321
Query: 113 VLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEM 157
+ + LD S N L+ D E+ L L L L N E+
Sbjct: 322 KI--SPFLHLDFSNNLLT-DTVFENCGHLTELETLILQMNQLKEL 363
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 50.2 bits (120), Expect = 1e-06
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 6/84 (7%)
Query: 75 PKITPLYLSFN----FFWKYCPLGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLS 130
+ L +S N ++ P I +DL +N +K + P V+ +Q L+++ NQL
Sbjct: 399 KSLLSLNMSSNILTDTIFRCLPPRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLK 457
Query: 131 GDIPVESFSVLANLTFLNLSYNHF 154
+P F L +L + L N +
Sbjct: 458 -SVPDGIFDRLTSLQKIWLHTNPW 480
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 50.2 bits (120), Expect = 1e-06
Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 6/62 (9%)
Query: 99 DLSNNSLK----GAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHF 154
L N LK A + +Q LD+S N +S D S +L LN+S N
Sbjct: 354 ILQMNQLKELSKIAEMTTQM--KSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNIL 411
Query: 155 SE 156
++
Sbjct: 412 TD 413
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 48.7 bits (116), Expect = 3e-06
Identities = 13/58 (22%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 99 DLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSE 156
++S N + + D+L ++++ L +S+N++ + + F L +L+LS+N +
Sbjct: 27 NISQNYISELWTSDILSLSKLRILIISHNRIQ-YLDISVFKFNQELEYLDLSHNKLVK 83
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 48.3 bits (115), Expect = 4e-06
Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
Query: 99 DLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSE 156
DLS+N L ++ LDLS+N + F ++ L FL LS H +
Sbjct: 75 DLSHNKLV-KISCHPT--VNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK 129
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 47.6 bits (113), Expect = 7e-06
Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 4/60 (6%)
Query: 97 SIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSE 156
+D S N L P D+ + L++S N +S ++ L+ L L +S+N
Sbjct: 4 LVDRSKNGLI-HVPKDLS--QKTTILNISQNYIS-ELWTSDILSLSKLRILIISHNRIQY 59
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 44.1 bits (104), Expect = 9e-05
Identities = 25/95 (26%), Positives = 41/95 (43%), Gaps = 16/95 (16%)
Query: 75 PKITPLYLSFNF--------FWKYCPLGIMSIDLSNNSLKGAFPIDVLL-CTQIQALDLS 125
K T L +S N+ L I + +S+N ++ I V +++ LDLS
Sbjct: 21 QKTTILNISQNYISELWTSDILSLSKLRI--LIISHNRIQ-YLDISVFKFNQELEYLDLS 77
Query: 126 YNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVS 160
+N+L I NL L+LS+N F + +
Sbjct: 78 HNKLVK-IS---CHPTVNLKHLDLSFNAFDALPIC 108
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 49.2 bits (118), Expect = 1e-06
Identities = 18/69 (26%), Positives = 27/69 (39%), Gaps = 4/69 (5%)
Query: 97 SIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSE 156
I ++ L + P + + L+L N+L +P F L LT L+LS N S
Sbjct: 11 EIRCNSKGLT-SVPTGIP--SSATRLELESNKLQ-SLPHGVFDKLTQLTKLSLSSNGLSF 66
Query: 157 MKVSDTKFF 165
F
Sbjct: 67 KGCCSQSDF 75
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 3e-06
Identities = 13/59 (22%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Query: 99 DLSNNSLKGAFPIDVLL-CTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSE 156
D+S+ + + + ++ L ++ N + + F+ L NLTFL+LS +
Sbjct: 132 DISHTHTR-VAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQ 189
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 46.9 bits (112), Expect = 8e-06
Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Query: 92 PLGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLS-GDIPVESFSVLANLTFLNLS 150
P ++L +N L+ TQ+ L LS N LS +S +L +L+LS
Sbjct: 27 PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLS 86
Query: 151 YNHFSEM 157
+N M
Sbjct: 87 FNGVITM 93
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 2e-05
Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Query: 99 DLSNNSLKGAFPIDVLL-CTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEM 157
D +++LK V L + LD+S+ F+ L++L L ++ N F E
Sbjct: 107 DFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTR-VAFNGIFNGLSSLEVLKMAGNSFQEN 165
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 2e-05
Identities = 18/89 (20%), Positives = 34/89 (38%), Gaps = 10/89 (11%)
Query: 75 PKITPLYLSFNFFWKYCPLGIMS-------IDLSNNSLKGAFPIDVLLC-TQIQALDLSY 126
+ L ++ N F + I + +DLS L+ + +Q L++S+
Sbjct: 150 SSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLE-QLSPTAFNSLSSLQVLNMSH 208
Query: 127 NQLSGDIPVESFSVLANLTFLNLSYNHFS 155
N + + L +L L+ S NH
Sbjct: 209 NNFF-SLDTFPYKCLNSLQVLDYSLNHIM 236
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 9e-05
Identities = 23/90 (25%), Positives = 38/90 (42%), Gaps = 9/90 (10%)
Query: 75 PKITPLYLSFNFF-WKYCPLG-------IMSIDLSNNSLKGAFPIDVLLCTQIQALDLSY 126
++T L LS N +K C + +DLS N + + L Q++ LD +
Sbjct: 52 TQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQH 110
Query: 127 NQLSGDIPVESFSVLANLTFLNLSYNHFSE 156
+ L F L NL +L++S+ H
Sbjct: 111 SNLKQMSEFSVFLSLRNLIYLDISHTHTRV 140
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327 | Back alignment and structure |
|---|
Score = 49.2 bits (118), Expect = 1e-06
Identities = 37/224 (16%), Positives = 75/224 (33%), Gaps = 61/224 (27%)
Query: 255 YKGILRDG-----TRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRT 309
YKG+ V I+ + S + E ++E ++ + ++ R+LG T
Sbjct: 32 YKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI-CLTST 90
Query: 310 RAIVTEWTNGGNVELWLSESAPSWKHR--LKVLIGVVEAMCYLQEQWPEVDY---DLRTG 364
++T+ G + ++ E + + L + + + M YL+++ DL
Sbjct: 91 VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR----RLVHRDLAAR 146
Query: 365 SVLLTDNLEPLISRF---------KIEYQHRSTKY--------------------VYKFG 395
+VL+ I+ F + EY K V+ +G
Sbjct: 147 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 206
Query: 396 LFLLEMIT----------NRRPLEEFERGEAGFIEYIRMHYPEN 429
+ + E++T E+GE R+ P
Sbjct: 207 VTVWELMTFGSKPYDGIPASEISSILEKGE-------RLPQPPI 243
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 49.2 bits (118), Expect = 2e-06
Identities = 14/68 (20%), Positives = 27/68 (39%), Gaps = 4/68 (5%)
Query: 97 SIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSE 156
+ LS N LK P + +Q L + N+++ + F+ L + + L N
Sbjct: 104 RLYLSKNQLK-ELPEKMP--KTLQELRVHENEIT-KVRKSVFNGLNQMIVVELGTNPLKS 159
Query: 157 MKVSDTKF 164
+ + F
Sbjct: 160 SGIENGAF 167
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 48.5 bits (116), Expect = 3e-06
Identities = 20/69 (28%), Positives = 27/69 (39%), Gaps = 9/69 (13%)
Query: 92 PLGIMSIDLSNNSLK----GAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFL 147
P +DL NN + G F + L L N++S I +F+ L L L
Sbjct: 51 PPDTALLDLQNNKITEIKDGDFK----NLKNLHTLILINNKIS-KISPGAFAPLVKLERL 105
Query: 148 NLSYNHFSE 156
LS N E
Sbjct: 106 YLSKNQLKE 114
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 46.9 bits (112), Expect = 7e-06
Identities = 15/86 (17%), Positives = 33/86 (38%), Gaps = 6/86 (6%)
Query: 75 PKITPLYLSFNFFW---KYCPLGIMSIDLSNNSLKGAFPIDVLL-CTQIQALDLSYNQLS 130
K++ + ++ + P + + L N + L + L LS+N +S
Sbjct: 171 KKLSYIRIADTNITTIPQGLPPSLTELHLDGNKIT-KVDAASLKGLNNLAKLGLSFNSIS 229
Query: 131 GDIPVESFSVLANLTFLNLSYNHFSE 156
+ S + +L L+L+ N +
Sbjct: 230 -AVDNGSLANTPHLRELHLNNNKLVK 254
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 1e-05
Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 4/60 (6%)
Query: 97 SIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSE 156
+ S+ L+ P D+ LDL N+++ +I F L NL L L N S+
Sbjct: 35 VVQCSDLGLE-KVPKDLP--PDTALLDLQNNKIT-EIKDGDFKNLKNLHTLILINNKISK 90
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 1e-05
Identities = 19/91 (20%), Positives = 39/91 (42%), Gaps = 12/91 (13%)
Query: 75 PKITPLYLSFNFFWK---YCPLGIMSIDLSNNSL----KGAFPIDVLLCTQIQALDLSYN 127
K+ LYLS N + P + + + N + K F + L Q+ ++L N
Sbjct: 100 VKLERLYLSKNQLKELPEKMPKTLQELRVHENEITKVRKSVF--NGL--NQMIVVELGTN 155
Query: 128 QL-SGDIPVESFSVLANLTFLNLSYNHFSEM 157
L S I +F + L+++ ++ + + +
Sbjct: 156 PLKSSGIENGAFQGMKKLSYIRIADTNITTI 186
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 2e-05
Identities = 24/117 (20%), Positives = 41/117 (35%), Gaps = 16/117 (13%)
Query: 61 NCVESFPKIDLRSRPKITPLYLSFNFF-------WKYCPLGIMSIDLSNNSLKGAFPIDV 113
N + L+ + L LSFN P + + L+NN L P +
Sbjct: 202 NKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTP-HLRELHLNNNKLV-KVPGGL 259
Query: 114 LLCTQIQALDLSYNQLSGDIPVESF------SVLANLTFLNLSYNHFSEMKVSDTKF 164
IQ + L N +S I F + A+ + ++L N ++ + F
Sbjct: 260 ADHKYIQVVYLHNNNIS-AIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTF 315
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 4e-05
Identities = 17/94 (18%), Positives = 32/94 (34%), Gaps = 21/94 (22%)
Query: 97 SIDLSNNSLK----GAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYN 152
+ LS NS+ G+ ++ L L+ N+L +P + + + L N
Sbjct: 220 KLGLSFNSISAVDNGSL----ANTPHLRELHLNNNKLV-KVP-GGLADHKYIQVVYLHNN 273
Query: 153 HFSEMKVSDTKFFQRFNSSSFLHSGLFPGHHNYT 186
+ S S+ F G +Y+
Sbjct: 274 NISA-----------IGSNDFCPPGYNTKKASYS 296
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 41.1 bits (97), Expect = 6e-04
Identities = 16/107 (14%), Positives = 31/107 (28%), Gaps = 18/107 (16%)
Query: 61 NCVESFPKIDLRSRPKITPLYLSFN--------FFWKYCPLGIMSIDLSNNSLK----GA 108
N + + L + P + L+L+ N I + L NN++
Sbjct: 226 NSISAVDNGSLANTPHLRELHLNNNKLVKVPGGLA---DHKYIQVVYLHNNNISAIGSND 282
Query: 109 FPIDVLL--CTQIQALDLSYNQLS-GDIPVESFSVLANLTFLNLSYN 152
F + L N + +I +F + + L
Sbjct: 283 FCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNY 329
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 Length = 192 | Back alignment and structure |
|---|
Score = 47.7 bits (114), Expect = 2e-06
Identities = 23/86 (26%), Positives = 34/86 (39%), Gaps = 16/86 (18%)
Query: 78 TPLYLSFNFFWKYCPLGIMS-------IDLSNNSLK----GAFPIDVLLCTQIQALDLSY 126
T L L+ N + G+ ++L N L AF + + IQ L L
Sbjct: 32 TELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAF--EGA--SHIQELQLGE 87
Query: 127 NQLSGDIPVESFSVLANLTFLNLSYN 152
N++ +I + F L L LNL N
Sbjct: 88 NKIK-EISNKMFLGLHQLKTLNLYDN 112
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 Length = 192 | Back alignment and structure |
|---|
Score = 39.6 bits (93), Expect = 9e-04
Identities = 16/70 (22%), Positives = 27/70 (38%), Gaps = 6/70 (8%)
Query: 92 PLGI----MSIDLSNNSLKGAFPIDVL-LCTQIQALDLSYNQLSGDIPVESFSVLANLTF 146
P I + L++N L + + L+L NQL+ I +F +++
Sbjct: 24 PRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLT-GIEPNAFEGASHIQE 82
Query: 147 LNLSYNHFSE 156
L L N E
Sbjct: 83 LQLGENKIKE 92
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 49.4 bits (118), Expect = 2e-06
Identities = 33/155 (21%), Positives = 46/155 (29%), Gaps = 41/155 (26%)
Query: 62 CVESFPKIDLRSR----------PKITPLYLSFNF--------FWKYCPLGIMSIDLSNN 103
C F K+ R L L N F L + L N
Sbjct: 52 CSNQFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHL--EVLQLGRN 109
Query: 104 SLK----GAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKV 159
S++ GAF + L + L+L N L+ IP +F L+ L L L N +
Sbjct: 110 SIRQIEVGAF--NGL--ASLNTLELFDNWLT-VIPSGAFEYLSKLRELWLRNNPIES--I 162
Query: 160 SDTKFF----------QRFNSSSFLHSGLFPGHHN 184
F ++ G F G N
Sbjct: 163 PSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFN 197
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 44.7 bits (106), Expect = 5e-05
Identities = 18/66 (27%), Positives = 27/66 (40%), Gaps = 10/66 (15%)
Query: 97 SIDLSNNSLK----GAFPIDVLLCTQIQALDLS-YNQLSGDIPVESFSVLANLTFLNLSY 151
+ L NN ++ AF + LDL +L I +F L NL +LNL
Sbjct: 151 ELWLRNNPIESIPSYAFNR----VPSLMRLDLGELKKLE-YISEGAFEGLFNLKYLNLGM 205
Query: 152 NHFSEM 157
+ +M
Sbjct: 206 CNIKDM 211
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 40.9 bits (96), Expect = 9e-04
Identities = 13/60 (21%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Query: 97 SIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSE 156
++L ++K + L ++ L++S N +I SF L++L L + + S
Sbjct: 200 YLNLGMCNIKDMPNLTPL--VGLEELEMSGNHFP-EIRPGSFHGLSSLKKLWVMNSQVSL 256
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289 | Back alignment and structure |
|---|
Score = 48.4 bits (116), Expect = 2e-06
Identities = 23/110 (20%), Positives = 47/110 (42%), Gaps = 11/110 (10%)
Query: 254 IYKGILRD--------GTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNN 305
I+KG+ R+ T V +++ R + F E ++ + HK+L+ G
Sbjct: 24 IFKGVRREVGDYGQLHETEVLLKVLD-KAHRNYSESFFEAASMMSKLSHKHLVLNYGVCV 82
Query: 306 SRRTRAIVTEWTNGGNVELWLSESAPSWKHR--LKVLIGVVEAMCYLQEQ 353
+V E+ G+++ +L ++ L+V + AM +L+E
Sbjct: 83 CGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEEN 132
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281 | Back alignment and structure |
|---|
Score = 48.3 bits (116), Expect = 2e-06
Identities = 32/222 (14%), Positives = 81/222 (36%), Gaps = 59/222 (26%)
Query: 255 YKGILRDG----TRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTR 310
Y+G+ + V ++ K D + + +++F+ E ++ H ++++++G
Sbjct: 29 YEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGI-IEEEPT 87
Query: 311 AIVTEWTNGGNVELWLSESAPSWKHR--LKVLIGVVEAMCYLQEQWPEVDY---DLRTGS 365
I+ E G + +L + S K + + + +AM YL+ + D+ +
Sbjct: 88 WIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESI----NCVHRDIAVRN 143
Query: 366 VLLTDNLEPLISRF--------KIEYQHRSTKY--------------------VYKFGLF 397
+L+ + F + Y+ T+ V+ F +
Sbjct: 144 ILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVC 203
Query: 398 LLEMIT----------NRRPLEEFERGEAGFIEYIRMHYPEN 429
+ E+++ N+ + E+G+ R+ P+
Sbjct: 204 MWEILSFGKQPFFWLENKDVIGVLEKGD-------RLPKPDL 238
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 48.9 bits (117), Expect = 2e-06
Identities = 23/104 (22%), Positives = 37/104 (35%), Gaps = 11/104 (10%)
Query: 61 NCVESFPKIDLRSRPKITPLYLSFNFFWKYCPLGI-------MSIDLSNNSLKGAFPIDV 113
+E I LY+ FN +Y P + + L N L + P +
Sbjct: 79 LQIEEIDTYAFAYAHTIQKLYMGFNAI-RYLPPHVFQNVPLLTVLVLERNDLS-SLPRGI 136
Query: 114 LL-CTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSE 156
++ L +S N L I ++F +L L LS N +
Sbjct: 137 FHNTPKLTTLSMSNNNLE-RIEDDTFQATTSLQNLQLSSNRLTH 179
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 48.9 bits (117), Expect = 2e-06
Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 5/61 (8%)
Query: 97 SIDLSNNSLKGAFPIDVLL-CTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFS 155
+ L +N+L LL + +DLSYN+L I F + L L +S N
Sbjct: 230 ILKLQHNNLT---DTAWLLNYPGLVEVDLSYNELE-KIMYHPFVKMQRLERLYISNNRLV 285
Query: 156 E 156
Sbjct: 286 A 286
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 1e-05
Identities = 9/60 (15%), Positives = 18/60 (30%), Gaps = 3/60 (5%)
Query: 97 SIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSE 156
ID+ + F L + + + + +P + LNL+ E
Sbjct: 27 HIDMQTQDVYFGFEDITL--NNQKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIEE 83
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 45.0 bits (107), Expect = 3e-05
Identities = 15/79 (18%), Positives = 30/79 (37%), Gaps = 7/79 (8%)
Query: 97 SIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSE 156
+DLS+N L + +++ L L +N + + + + L L LS+N +
Sbjct: 299 VLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIV-TLKLSTHH---TLKNLTLSHNDWDC 353
Query: 157 MKVSDTKFFQRFNSSSFLH 175
S F+ +
Sbjct: 354 --NSLRALFRNVARPAVDD 370
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 43.9 bits (104), Expect = 8e-05
Identities = 15/61 (24%), Positives = 27/61 (44%), Gaps = 4/61 (6%)
Query: 97 SIDLSNNSLKGAFPIDVLL-CTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFS 155
+DLS N L+ + +++ L +S N+L + + L L+LS+NH
Sbjct: 252 EVDLSYNELE-KIMYHPFVKMQRLERLYISNNRLV-ALN-LYGQPIPTLKVLDLSHNHLL 308
Query: 156 E 156
Sbjct: 309 H 309
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 1e-04
Identities = 21/88 (23%), Positives = 40/88 (45%), Gaps = 8/88 (9%)
Query: 97 SIDLSNNSLKGAFPIDVLL-CTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFS 155
++ +SNN+L+ D T +Q L LS N+L+ + S++ +L N+SYN S
Sbjct: 145 TLSMSNNNLE-RIEDDTFQATTSLQNLQLSSNRLT-HVD---LSLIPSLFHANVSYNLLS 199
Query: 156 EMKVSD--TKFFQRFNSSSFLHSGLFPG 181
+ + + NS + + +
Sbjct: 200 TLAIPIAVEELDASHNSINVVRGPVNVE 227
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 49.2 bits (117), Expect = 2e-06
Identities = 17/62 (27%), Positives = 26/62 (41%), Gaps = 5/62 (8%)
Query: 97 SIDLSNNSLKGAFPIDVLL-CTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFS 155
+ L +N+L LL + +DLSYN+L I F + L L +S N
Sbjct: 236 ILKLQHNNLT---DTAWLLNYPGLVEVDLSYNELE-KIMYHPFVKMQRLERLYISNNRLV 291
Query: 156 EM 157
+
Sbjct: 292 AL 293
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 47.6 bits (113), Expect = 7e-06
Identities = 23/104 (22%), Positives = 37/104 (35%), Gaps = 11/104 (10%)
Query: 61 NCVESFPKIDLRSRPKITPLYLSFNFFWKYCPLGI-------MSIDLSNNSLKGAFPIDV 113
+E I LY+ FN +Y P + + L N L + P +
Sbjct: 85 LQIEEIDTYAFAYAHTIQKLYMGFNAI-RYLPPHVFQNVPLLTVLVLERNDLS-SLPRGI 142
Query: 114 LL-CTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSE 156
++ L +S N L I ++F +L L LS N +
Sbjct: 143 FHNTPKLTTLSMSNNNLE-RIEDDTFQATTSLQNLQLSSNRLTH 185
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 47.6 bits (113), Expect = 7e-06
Identities = 9/60 (15%), Positives = 18/60 (30%), Gaps = 3/60 (5%)
Query: 97 SIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSE 156
ID+ + F L + + + + +P + LNL+ E
Sbjct: 33 HIDMQTQDVYFGFEDITL--NNQKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIEE 89
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 46.5 bits (110), Expect = 2e-05
Identities = 15/64 (23%), Positives = 26/64 (40%), Gaps = 9/64 (14%)
Query: 97 SIDLSNNSLK----GAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYN 152
++L++ ++ AF IQ L + +N + +P F + LT L L N
Sbjct: 79 LLNLNDLQIEEIDTYAFA----YAHTIQKLYMGFNAIR-YLPPHVFQNVPLLTVLVLERN 133
Query: 153 HFSE 156
S
Sbjct: 134 DLSS 137
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 44.5 bits (105), Expect = 6e-05
Identities = 15/61 (24%), Positives = 27/61 (44%), Gaps = 4/61 (6%)
Query: 97 SIDLSNNSLKGAFPIDVLL-CTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFS 155
+DLS N L+ + +++ L +S N+L + + L L+LS+NH
Sbjct: 258 EVDLSYNELE-KIMYHPFVKMQRLERLYISNNRLV-ALN-LYGQPIPTLKVLDLSHNHLL 314
Query: 156 E 156
Sbjct: 315 H 315
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 44.5 bits (105), Expect = 7e-05
Identities = 21/90 (23%), Positives = 40/90 (44%), Gaps = 12/90 (13%)
Query: 97 SIDLSNNSLKGAFPIDVLL-CTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFS 155
++ +SNN+L+ D T +Q L LS N+L+ + S++ +L N+SYN S
Sbjct: 151 TLSMSNNNLE-RIEDDTFQATTSLQNLQLSSNRLT-HVD---LSLIPSLFHANVSYNLLS 205
Query: 156 EMKVSDTKFFQR----FNSSSFLHSGLFPG 181
++ + NS + + +
Sbjct: 206 T--LAIPIAVEELDASHNSINVVRGPVNVE 233
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 43.8 bits (103), Expect = 1e-04
Identities = 15/79 (18%), Positives = 30/79 (37%), Gaps = 7/79 (8%)
Query: 97 SIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSE 156
+DLS+N L + +++ L L +N + + + + L L LS+N +
Sbjct: 305 VLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIV-TLKLSTHH---TLKNLTLSHNDWDC 359
Query: 157 MKVSDTKFFQRFNSSSFLH 175
S F+ +
Sbjct: 360 --NSLRALFRNVARPAVDD 376
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 48.7 bits (116), Expect = 2e-06
Identities = 16/59 (27%), Positives = 24/59 (40%), Gaps = 3/59 (5%)
Query: 99 DLSNNSLKGAFPIDVLL-CTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSE 156
DLS+N L + ++ L L N + + +F +A L L LS N S
Sbjct: 94 DLSSNHLH-TLDEFLFSDLQALEVLLLYNNHIV-VVDRNAFEDMAQLQKLYLSQNQISR 150
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 44.4 bits (105), Expect = 5e-05
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 10/67 (14%)
Query: 92 PLGIMSIDLSNNSL-----KGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTF 146
P +DLS+N+L + L T + +L LS+N L+ I E+F + NL +
Sbjct: 38 PSYTALLDLSHNNLSRLRAEWTP--TRL--TNLHSLLLSHNHLN-FISSEAFVPVPNLRY 92
Query: 147 LNLSYNH 153
L+LS NH
Sbjct: 93 LDLSSNH 99
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 42.1 bits (99), Expect = 2e-04
Identities = 28/91 (30%), Positives = 36/91 (39%), Gaps = 22/91 (24%)
Query: 80 LYLSFN--------FFWKYCPLGIMSIDLSNNSLK----GAFPIDVLLCTQIQALDLSYN 127
L LS N F L + L NN + AF + + Q+Q L LS N
Sbjct: 93 LDLSSNHLHTLDEFLFSDLQAL--EVLLLYNNHIVVVDRNAF--EDM--AQLQKLYLSQN 146
Query: 128 QLSGDIPVESF---SVLANLTFLNLSYNHFS 155
Q+S PVE + L L L+LS N
Sbjct: 147 QIS-RFPVELIKDGNKLPKLMLLDLSSNKLK 176
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 40.6 bits (95), Expect = 9e-04
Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 3/60 (5%)
Query: 97 SIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSE 156
+ S L P L + LDLS+N LS + + L NL L LS+NH +
Sbjct: 22 ILSCSKQQLP-NVPQS--LPSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNF 78
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 48.0 bits (115), Expect = 3e-06
Identities = 22/128 (17%), Positives = 48/128 (37%), Gaps = 14/128 (10%)
Query: 255 YKGILRDG----TRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGW-NNSRRT 309
Y G D + I+ + + F+ E L+ H N++ ++G
Sbjct: 38 YHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGL 97
Query: 310 RAIVTEWTNGGNVELWL--SESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDY---DLRTG 364
++ + G++ ++ + P+ K + + V M YL EQ + DL
Sbjct: 98 PHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQ----KFVHRDLAAR 153
Query: 365 SVLLTDNL 372
+ +L ++
Sbjct: 154 NCMLDESF 161
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 48.3 bits (115), Expect = 4e-06
Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 8/85 (9%)
Query: 75 PKITPLYLSFN-----FFWKYCPLGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQL 129
I L LS N F P + +DL NN + + P DV +Q L+++ NQL
Sbjct: 428 ESILVLNLSSNMLTGSVFRCL-PPKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQL 485
Query: 130 SGDIPVESFSVLANLTFLNLSYNHF 154
+P F L +L ++ L N +
Sbjct: 486 K-SVPDGVFDRLTSLQYIWLHDNPW 509
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 47.9 bits (114), Expect = 6e-06
Identities = 35/143 (24%), Positives = 55/143 (38%), Gaps = 30/143 (20%)
Query: 53 LCNESKNPNCVESFPKIDLRSR----------PKITPLYLSFNFFWKYCPLGIMSID--- 99
L S P E +D +R P+ L LS N + L + I
Sbjct: 20 LIVGSMTPFSNELESMVDYSNRNLTHVPKDLPPRTKALSLSQNSISE---LRMPDISFLS 76
Query: 100 ------LSNNSLKGAFPIDVLLC-TQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYN 152
LS+N ++ + V L ++ LD+S+N+L I +A+L L+LS+N
Sbjct: 77 ELRVLRLSHNRIR-SLDFHVFLFNQDLEYLDVSHNRLQN-IS---CCPMASLRHLDLSFN 131
Query: 153 HFSEMKVSDTKFFQRFNSSSFLH 175
F + K F +FL
Sbjct: 132 DFDVLP--VCKEFGNLTKLTFLG 152
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 44.9 bits (106), Expect = 5e-05
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Query: 99 DLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPV-ESFSVLANLTFLNLSYN 152
D+S+N L+ + ++ LDLS+N +PV + F L LTFL LS
Sbjct: 106 DVSHNRLQ-NISCCPM--ASLRHLDLSFNDFD-VLPVCKEFGNLTKLTFLGLSAA 156
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288 | Back alignment and structure |
|---|
Score = 47.2 bits (113), Expect = 5e-06
Identities = 30/125 (24%), Positives = 59/125 (47%), Gaps = 13/125 (10%)
Query: 255 YKGILRDG-TRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIV 313
Y+G+ + V ++ K D +EF++E ++ + +H NL+++LG I+
Sbjct: 30 YEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 87
Query: 314 TEWTNGGNVELWLSESAP---SWKHRLKVLIGVVEAMCYLQEQWPEVDY---DLRTGSVL 367
TE+ GN+ +L E S L + + AM YL+++ ++ DL + L
Sbjct: 88 TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK----NFIHRDLAARNCL 143
Query: 368 LTDNL 372
+ +N
Sbjct: 144 VGENH 148
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 47.7 bits (114), Expect = 5e-06
Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 6/81 (7%)
Query: 80 LYLSFNFF---WKYCPLGIMSIDLSNNSLKGAFPIDVLL-CTQIQALDLSYNQLSGDIPV 135
L +S K P + + L +N ++ A ++ LL +++ L L +NQ+ I
Sbjct: 177 LRISEAKLTGIPKDLPETLNELHLDHNKIQ-AIELEDLLRYSKLYRLGLGHNQIR-MIEN 234
Query: 136 ESFSVLANLTFLNLSYNHFSE 156
S S L L L+L N S
Sbjct: 235 GSLSFLPTLRELHLDNNKLSR 255
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 47.3 bits (113), Expect = 5e-06
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
Query: 91 CPLGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLS 150
+DL NN + D + AL L N++S I ++FS L L L +S
Sbjct: 52 ISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKIS-KIHEKAFSPLRKLQKLYIS 110
Query: 151 YNHFSE 156
NH E
Sbjct: 111 KNHLVE 116
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 3e-05
Identities = 13/69 (18%), Positives = 26/69 (37%), Gaps = 4/69 (5%)
Query: 96 MSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFS 155
+ +S N L P ++ + + L + N++ +P FS L N+ + + N
Sbjct: 105 QKLYISKNHLV-EIPPNLP--SSLVELRIHDNRIR-KVPKGVFSGLRNMNCIEMGGNPLE 160
Query: 156 EMKVSDTKF 164
F
Sbjct: 161 NSGFEPGAF 169
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 1e-04
Identities = 23/118 (19%), Positives = 37/118 (31%), Gaps = 18/118 (15%)
Query: 61 NCVESFPKIDLRSRPKITPLYLSFNF--------FWKYCPLGIMSIDLSNNSLKGAFPID 112
N +++ DL K+ L L N L + L NN L P
Sbjct: 203 NKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTL--RELHLDNNKLS-RVPAG 259
Query: 113 VLLCTQIQALDLSYNQLSGDIPVESFS------VLANLTFLNLSYNHFSEMKVSDTKF 164
+ +Q + L N ++ + V F A ++L N +V F
Sbjct: 260 LPDLKLLQVVYLHTNNIT-KVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATF 316
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 47.4 bits (113), Expect = 6e-06
Identities = 26/117 (22%), Positives = 37/117 (31%), Gaps = 29/117 (24%)
Query: 62 CVESFPKIDLRSR----------PKITPLYLSFNF--------FWKYCPLGIMSIDLSNN 103
C F K+ + L L N F L + LS N
Sbjct: 41 CSNQFSKVICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHL--EILQLSRN 98
Query: 104 SLK----GAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSE 156
++ GAF + L+L N+L+ IP +F L+ L L L N
Sbjct: 99 HIRTIEIGAFNG----LANLNTLELFDNRLT-TIPNGAFVYLSKLKELWLRNNPIES 150
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 45.1 bits (107), Expect = 4e-05
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 10/66 (15%)
Query: 97 SIDLSNNSLK----GAFPIDVLLCTQIQALDLS-YNQLSGDIPVESFSVLANLTFLNLSY 151
+ L NN ++ AF ++ LDL +LS I +F L+NL +LNL+
Sbjct: 140 ELWLRNNPIESIPSYAFNR----IPSLRRLDLGELKRLS-YISEGAFEGLSNLRYLNLAM 194
Query: 152 NHFSEM 157
+ E+
Sbjct: 195 CNLREI 200
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291 | Back alignment and structure |
|---|
Score = 46.9 bits (112), Expect = 7e-06
Identities = 29/133 (21%), Positives = 57/133 (42%), Gaps = 13/133 (9%)
Query: 255 YKGILRDG---TRVKIEIYK-GDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTR 310
KG + V ++I K ++DE + E ++ Q + ++R++G +
Sbjct: 34 KKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGI-CEAESW 92
Query: 311 AIVTEWTNGGNVELWLSESAP-SWKHRLKVLIGVVEAMCYLQEQWPEVDY---DLRTGSV 366
+V E G + +L ++ K+ ++++ V M YL+E ++ DL +V
Sbjct: 93 MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES----NFVHRDLAARNV 148
Query: 367 LLTDNLEPLISRF 379
LL IS F
Sbjct: 149 LLVTQHYAKISDF 161
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327 | Back alignment and structure |
|---|
Score = 46.9 bits (112), Expect = 8e-06
Identities = 19/106 (17%), Positives = 45/106 (42%), Gaps = 8/106 (7%)
Query: 255 YKGILRDG-----TRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRT 309
YKG+ V I+ + S + E ++E ++ + ++ R+LG T
Sbjct: 32 YKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI-CLTST 90
Query: 310 RAIVTEWTNGGNVELWLSESAP--SWKHRLKVLIGVVEAMCYLQEQ 353
++T+ G + ++ E ++ L + + + M YL+++
Sbjct: 91 VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 136
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 46.5 bits (111), Expect = 8e-06
Identities = 14/61 (22%), Positives = 28/61 (45%), Gaps = 9/61 (14%)
Query: 99 DLSNNSLK----GAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHF 154
DLS ++ GA+ L + + L L+ N + + + +FS L++L L +
Sbjct: 58 DLSRCEIQTIEDGAY--QSL--SHLSTLILTGNPIQ-SLALGAFSGLSSLQKLVAVETNL 112
Query: 155 S 155
+
Sbjct: 113 A 113
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 4e-05
Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Query: 92 PLGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSY 151
PL +S+DLS N + +++ L L NQL +P F L +L + L
Sbjct: 176 PLLNLSLDLSLNPMN-FIQPGAFKEIRLKELALDTNQLK-SVPDGIFDRLTSLQKIWLHT 233
Query: 152 N 152
N
Sbjct: 234 N 234
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 44.2 bits (105), Expect = 5e-05
Identities = 11/65 (16%), Positives = 25/65 (38%), Gaps = 3/65 (4%)
Query: 99 DLSNNSLKGAFPIDVLL-CTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEM 157
L+ N ++ + + + +Q L L+ + L L LN+++N
Sbjct: 82 ILTGNPIQ-SLALGAFSGLSSLQKLVAVETNLA-SLENFPIGHLKTLKELNVAHNLIQSF 139
Query: 158 KVSDT 162
K+ +
Sbjct: 140 KLPEY 144
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 42.3 bits (100), Expect = 2e-04
Identities = 12/39 (30%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Query: 117 TQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFS 155
+ LDLS+N L + SF L L+LS
Sbjct: 28 FSTKNLDLSFNPLR-HLGSYSFFSFPELQVLDLSRCEIQ 65
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 3e-04
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Query: 99 DLSNNSLKG--AFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYN 152
+L FPI L ++ L++++N + E FS L NL L+LS N
Sbjct: 106 VAVETNLASLENFPIGHL--KTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSN 159
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 46.5 bits (111), Expect = 9e-06
Identities = 20/61 (32%), Positives = 25/61 (40%), Gaps = 9/61 (14%)
Query: 99 DLSNNSLK----GAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHF 154
L L+ G F L +Q L L N L +P ++F L NLT L L N
Sbjct: 111 HLDRCGLQELGPGLF--RGL--AALQYLYLQDNALQ-ALPDDTFRDLGNLTHLFLHGNRI 165
Query: 155 S 155
S
Sbjct: 166 S 166
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 46.5 bits (111), Expect = 1e-05
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Query: 99 DLSNNSLKGAFPIDVLL-CTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSE 156
L +N+L+ A P D + L L N++S +P +F L +L L L N +
Sbjct: 135 YLQDNALQ-ALPDDTFRDLGNLTHLFLHGNRIS-SVPERAFRGLHSLDRLLLHQNRVAH 191
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 6e-05
Identities = 14/59 (23%), Positives = 22/59 (37%), Gaps = 2/59 (3%)
Query: 99 DLSNNSLKGAFPIDVLL-CTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSE 156
DLS+N+ + ++ L L L ++ F LA L +L L N
Sbjct: 86 DLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQ-ELGPGLFRGLAALQYLYLQDNALQA 143
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 6e-05
Identities = 21/94 (22%), Positives = 30/94 (31%), Gaps = 18/94 (19%)
Query: 75 PKITPLYLSFNF--------FWKYCPLGIMSIDLSNNSL----KGAFPIDVLLCTQIQAL 122
++L N F L + L +N L AF L ++ L
Sbjct: 32 AASQRIFLHGNRISHVPAASFRACRNL--TILWLHSNVLARIDAAAF--TGL--ALLEQL 85
Query: 123 DLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSE 156
DLS N + +F L L L+L E
Sbjct: 86 DLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQE 119
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 1e-05
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 9/65 (13%)
Query: 92 PLGIMSIDLSNNSLK----GAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFL 147
P I I L N++K GAF +++ +DLS NQ+S ++ ++F L +L L
Sbjct: 31 PETITEIRLEQNTIKVIPPGAF--SPY--KKLRRIDLSNNQIS-ELAPDAFQGLRSLNSL 85
Query: 148 NLSYN 152
L N
Sbjct: 86 VLYGN 90
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 5e-05
Identities = 25/107 (23%), Positives = 41/107 (38%), Gaps = 19/107 (17%)
Query: 61 NCVESFPKIDLRSRPKITPLYLSFNF--------FWKYCPLGIMSIDLSNNSLK----GA 108
N ++ P K+ + LS N F L S+ L N +
Sbjct: 42 NTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLN--SLVLYGNKITELPKSL 99
Query: 109 FPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFS 155
F + L +Q L L+ N+++ + V++F L NL L+L N
Sbjct: 100 F--EGL--FSLQLLLLNANKINC-LRVDAFQDLHNLNLLSLYDNKLQ 141
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 40.4 bits (95), Expect = 5e-04
Identities = 13/40 (32%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Query: 117 TQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSE 156
I + L N + IP +FS L ++LS N SE
Sbjct: 32 ETITEIRLEQNTIK-VIPPGAFSPYKKLRRIDLSNNQISE 70
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 47.1 bits (111), Expect = 1e-05
Identities = 21/116 (18%), Positives = 37/116 (31%), Gaps = 8/116 (6%)
Query: 47 TIVASHLCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCPLGIMS----IDLSN 102
+ + + + L+L+ C L + +DLS+
Sbjct: 413 AVDPMRAAYLDDLRSKFLLENSVLKMEYADVRVLHLAHKDLTVLCHLEQLLLVTHLDLSH 472
Query: 103 NSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMK 158
N L+ A P + ++ L S N L V+ + L L L L N +
Sbjct: 473 NRLR-ALPPALAALRCLEVLQASDNALEN---VDGVANLPRLQELLLCNNRLQQSA 524
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 41.3 bits (96), Expect = 6e-04
Identities = 20/88 (22%), Positives = 35/88 (39%), Gaps = 9/88 (10%)
Query: 75 PKITPLYLSFNFFWKYCPLGIMS------IDLSNNSLKGAFPIDVLLCTQIQALDLSYNQ 128
+T L LS N + P + + + S+N+L+ + L ++Q L L N+
Sbjct: 463 LLVTHLDLSHNRL-RALPPALAALRCLEVLQASDNALENVDGVANL--PRLQELLLCNNR 519
Query: 129 LSGDIPVESFSVLANLTFLNLSYNHFSE 156
L ++ L LNL N +
Sbjct: 520 LQQSAAIQPLVSCPRLVLLNLQGNSLCQ 547
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 47.0 bits (111), Expect = 1e-05
Identities = 17/88 (19%), Positives = 33/88 (37%), Gaps = 9/88 (10%)
Query: 75 PKITPLYLSFNFFWKYCPLG----IMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLS 130
I + + + + + + L+ N L P+ L + L L N++
Sbjct: 43 NSIDQIIANNSDIKSVQGIQYLPNVTKLFLNGNKLTDIKPLTNL--KNLGWLFLDENKIK 100
Query: 131 GDIPVESFSVLANLTFLNLSYNHFSEMK 158
D+ S L L L+L +N S++
Sbjct: 101 -DL--SSLKDLKKLKSLSLEHNGISDIN 125
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 45.1 bits (106), Expect = 4e-05
Identities = 19/87 (21%), Positives = 32/87 (36%), Gaps = 9/87 (10%)
Query: 75 PKITPLYLSFNFFWKYCPLG----IMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLS 130
+ L I I +N+ +K I L + L L+ N+L+
Sbjct: 21 AETIKDNLKKKSVTDAVTQNELNSIDQIIANNSDIKSVQGIQYL--PNVTKLFLNGNKLT 78
Query: 131 GDIPVESFSVLANLTFLNLSYNHFSEM 157
DI + + L NL +L L N ++
Sbjct: 79 -DI--KPLTNLKNLGWLFLDENKIKDL 102
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 44.3 bits (104), Expect = 8e-05
Identities = 12/64 (18%), Positives = 27/64 (42%), Gaps = 5/64 (7%)
Query: 95 IMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHF 154
+ +L S+ A + L I + + + + + + L N+T L L+ N
Sbjct: 23 TIKDNLKKKSVTDAVTQNEL--NSIDQIIANNSDIK-SV--QGIQYLPNVTKLFLNGNKL 77
Query: 155 SEMK 158
+++K
Sbjct: 78 TDIK 81
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 43.9 bits (103), Expect = 1e-04
Identities = 26/92 (28%), Positives = 39/92 (42%), Gaps = 9/92 (9%)
Query: 71 LRSRPKITPLYLSFNFFWKYCPLGIMS----IDLSNNSLKGAFPIDVLLCTQIQALDLSY 126
L+ K+ L L N L + + L NN + + L T++ L L
Sbjct: 105 LKDLKKLKSLSLEHNGISDINGLVHLPQLESLYLGNNKITDITVLSRL--TKLDTLSLED 162
Query: 127 NQLSGDIPVESFSVLANLTFLNLSYNHFSEMK 158
NQ+S DI + L L L LS NH S+++
Sbjct: 163 NQIS-DI--VPLAGLTKLQNLYLSKNHISDLR 191
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 43.6 bits (102), Expect = 1e-04
Identities = 24/104 (23%), Positives = 41/104 (39%), Gaps = 9/104 (8%)
Query: 75 PKITPLYLSFNFFWKYCPLGIMS----IDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLS 130
P++ LYL N L ++ + L +N + P+ L T++Q L LS N +S
Sbjct: 131 PQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIVPLAGL--TKLQNLYLSKNHIS 188
Query: 131 GDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFL 174
D+ + + L NL L L ++ N+
Sbjct: 189 -DL--RALAGLKNLDVLELFSQECLNKPINHQSNLVVPNTVKNT 229
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 42.8 bits (100), Expect = 2e-04
Identities = 20/87 (22%), Positives = 36/87 (41%), Gaps = 9/87 (10%)
Query: 75 PKITPLYLSFNFFWKYCPLGIMS----IDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLS 130
+ L+L N L + + L +N + + L Q+++L L N+++
Sbjct: 87 KNLGWLFLDENKIKDLSSLKDLKKLKSLSLEHNGISDINGLVHL--PQLESLYLGNNKIT 144
Query: 131 GDIPVESFSVLANLTFLNLSYNHFSEM 157
DI S L L L+L N S++
Sbjct: 145 -DI--TVLSRLTKLDTLSLEDNQISDI 168
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 46.5 bits (111), Expect = 1e-05
Identities = 17/86 (19%), Positives = 28/86 (32%), Gaps = 11/86 (12%)
Query: 75 PKITPLYLSFNFFWKYCPLGIMS----IDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLS 130
P + + N + L + I NNSLK L ++++ N L
Sbjct: 173 PSLEFIAAGNNQLEELPELQNLPFLTAIYADNNSLKKLPD----LPLSLESIVAGNNILE 228
Query: 131 GDIPVESFSVLANLTFLNLSYNHFSE 156
++P L LT + N
Sbjct: 229 -ELP--ELQNLPFLTTIYADNNLLKT 251
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 1e-04
Identities = 14/77 (18%), Positives = 29/77 (37%), Gaps = 8/77 (10%)
Query: 80 LYLSFNFFWKYCPLGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFS 139
+ P + + +SNN L+ P ++ + ++ +D+ N L +P
Sbjct: 119 DNNNLKALSDLPP-LLEYLGVSNNQLE-KLP-ELQNSSFLKIIDVDNNSLK-KLPDL--- 171
Query: 140 VLANLTFLNLSYNHFSE 156
+L F+ N E
Sbjct: 172 -PPSLEFIAAGNNQLEE 187
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 42.7 bits (101), Expect = 2e-04
Identities = 17/96 (17%), Positives = 32/96 (33%), Gaps = 11/96 (11%)
Query: 61 NCVESFPKIDLRSRPKITPLYLSFNFFWKYCPLGIMSIDLSNNSLKGAFPIDVLLCTQIQ 120
+ + P + + T Y +++ + + P G + L Q
Sbjct: 21 SNLTEMPV-EAENVKSKTEYYNAWSEWERNAPPGN-----GEQREMAVSRLRDCLDRQAH 74
Query: 121 ALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSE 156
L+L+ LS +P +L L S N +E
Sbjct: 75 ELELNNLGLS-SLPEL----PPHLESLVASCNSLTE 105
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 42.7 bits (101), Expect = 2e-04
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 11/84 (13%)
Query: 75 PKITPLYLSFNFFWKYCPL--GIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGD 132
P + L S N C L + +++SNN L P L +++ L S+N L+ +
Sbjct: 297 PNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLI-ELP---ALPPRLERLIASFNHLA-E 351
Query: 133 IPVESFSVLANLTFLNLSYNHFSE 156
+P NL L++ YN E
Sbjct: 352 VPEL----PQNLKQLHVEYNPLRE 371
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 2e-05
Identities = 17/87 (19%), Positives = 37/87 (42%), Gaps = 9/87 (10%)
Query: 75 PKITPLYLSFNFFWKYCPLGIM----SIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLS 130
IT L + + ++L +N + P+ L T+I L+LS N L
Sbjct: 41 DGITTLSAFGTGVTTIEGVQYLNNLIGLELKDNQITDLAPLKNL--TKITELELSGNPLK 98
Query: 131 GDIPVESFSVLANLTFLNLSYNHFSEM 157
++ + + L ++ L+L+ +++
Sbjct: 99 -NV--SAIAGLQSIKTLDLTSTQITDV 122
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 44.7 bits (106), Expect = 4e-05
Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 9/87 (10%)
Query: 75 PKITPLYLSFNFFWKYCPLG----IMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLS 130
KIT L LS N + I ++DL++ + P+ L + +Q L L NQ++
Sbjct: 85 TKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGL--SNLQVLYLDLNQIT 142
Query: 131 GDIPVESFSVLANLTFLNLSYNHFSEM 157
+ + L NL +L++ S++
Sbjct: 143 N---ISPLAGLTNLQYLSIGNAQVSDL 166
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 43.9 bits (104), Expect = 6e-05
Identities = 24/92 (26%), Positives = 38/92 (41%), Gaps = 9/92 (9%)
Query: 71 LRSRPKITPLYLSFNFFWKYCPLGIM----SIDLSNNSLKGAFPIDVLLCTQIQALDLSY 126
++ + L L N PL + ++LS N LK I L I+ LDL+
Sbjct: 59 VQYLNNLIGLELKDNQITDLAPLKNLTKITELELSGNPLKNVSAIAGL--QSIKTLDLTS 116
Query: 127 NQLSGDIPVESFSVLANLTFLNLSYNHFSEMK 158
Q++ V + L+NL L L N + +
Sbjct: 117 TQITD---VTPLAGLSNLQVLYLDLNQITNIS 145
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 43.1 bits (102), Expect = 1e-04
Identities = 21/87 (24%), Positives = 34/87 (39%), Gaps = 9/87 (10%)
Query: 75 PKITPLYLSFNFFWKYCPLGIMS----IDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLS 130
I L L+ PL +S + L N + P+ L T +Q L + Q+S
Sbjct: 107 QSIKTLDLTSTQITDVTPLAGLSNLQVLYLDLNQITNISPLAGL--TNLQYLSIGNAQVS 164
Query: 131 GDIPVESFSVLANLTFLNLSYNHFSEM 157
+ + L+ LT L N S++
Sbjct: 165 D---LTPLANLSKLTTLKADDNKISDI 188
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 41.2 bits (97), Expect = 5e-04
Identities = 20/85 (23%), Positives = 34/85 (40%), Gaps = 9/85 (10%)
Query: 75 PKITPLYLSFNFFWKYCPLG----IMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLS 130
+ LYL N PL + + + N + P+ L +++ L N++S
Sbjct: 129 SNLQVLYLDLNQITNISPLAGLTNLQYLSIGNAQVSDLTPLANL--SKLTTLKADDNKIS 186
Query: 131 GDIPVESFSVLANLTFLNLSYNHFS 155
DI + L NL ++L N S
Sbjct: 187 -DIS--PLASLPNLIEVHLKNNQIS 208
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 40.8 bits (96), Expect = 7e-04
Identities = 12/64 (18%), Positives = 21/64 (32%), Gaps = 5/64 (7%)
Query: 95 IMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHF 154
+ I +++ L I L ++ I E L NL L L N
Sbjct: 21 AIKIAAGKSNVTDTVTQADL--DGITTLSAFGTGVT-TI--EGVQYLNNLIGLELKDNQI 75
Query: 155 SEMK 158
+++
Sbjct: 76 TDLA 79
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 2e-05
Identities = 21/130 (16%), Positives = 50/130 (38%), Gaps = 16/130 (12%)
Query: 255 YKGIL-----RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLG--WNNSR 307
G +V ++ K + + +E ++L H+N+++ G +
Sbjct: 38 ELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGG 97
Query: 308 RTRAIVTEWTNGGNVELWLSESAPSWKHR--LKVLIGVVEAMCYLQEQWPEVDY---DLR 362
++ E+ G+++ +L ++ + LK + + + M YL + Y DL
Sbjct: 98 NGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSR----QYVHRDLA 153
Query: 363 TGSVLLTDNL 372
+VL+
Sbjct: 154 ARNVLVESEH 163
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 46.1 bits (109), Expect = 2e-05
Identities = 15/58 (25%), Positives = 26/58 (44%), Gaps = 8/58 (13%)
Query: 99 DLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSE 156
L+ +L + P + L QI L+++ N L +P A+L +L+ N S
Sbjct: 65 QLNRLNLS-SLPDN--LPPQITVLEITQNALI-SLPEL----PASLEYLDACDNRLST 114
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 43.0 bits (101), Expect = 2e-04
Identities = 17/84 (20%), Positives = 30/84 (35%), Gaps = 11/84 (13%)
Query: 80 LYLSFNFFWKYCPLGIMS---IDLSNNSLKGAFPIDVLLCTQIQ----ALDLSYNQLSGD 132
L + N + P S +D+S N L+ + P + + N+++
Sbjct: 165 LSVRNNQL-TFLPELPESLEALDVSTNLLE-SLPAVPVRNHHSEETEIFFRCRENRIT-H 221
Query: 133 IPVESFSVLANLTFLNLSYNHFSE 156
IP E+ L + L N S
Sbjct: 222 IP-ENILSLDPTCTIILEDNPLSS 244
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 41.1 bits (96), Expect = 8e-04
Identities = 25/145 (17%), Positives = 51/145 (35%), Gaps = 24/145 (16%)
Query: 16 NSTIMNNCIHNPSLKYCNSSSPMDLNEIFKSTIVASHLCNESKNPNCVESFPKIDLRSRP 75
N ++ N +N S + D + L E++N V + +
Sbjct: 10 NFSLSQNSFYNTI-----SGTYADYFSAWDK-WEKQALPGENRN-EAVSLLKECLINQ-- 60
Query: 76 KITPLYLSFNFFWKYCPLGI----MSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSG 131
+ L L+ P + ++++ N+L + P ++ LD N+LS
Sbjct: 61 -FSELQLNRLNL-SSLPDNLPPQITVLEITQNALI-SLPELP---ASLEYLDACDNRLS- 113
Query: 132 DIPVESFSVLANLTFLNLSYNHFSE 156
+P A+L L++ N +
Sbjct: 114 TLPEL----PASLKHLDVDNNQLTM 134
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 2e-05
Identities = 24/111 (21%), Positives = 47/111 (42%), Gaps = 10/111 (9%)
Query: 253 AIYKGILRDG--TRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTR 310
G+ D +V ++ S + +F+ E ++ +F H+N++R +G + R
Sbjct: 49 GQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 108
Query: 311 AIVTEWTNGGNVELWLSESAPSWKHR--------LKVLIGVVEAMCYLQEQ 353
I+ E GG+++ +L E+ P L V + YL+E
Sbjct: 109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN 159
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} Length = 193 | Back alignment and structure |
|---|
Score = 44.2 bits (105), Expect = 2e-05
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 9/59 (15%)
Query: 98 IDLSNNSLK----GAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYN 152
IDLSNN + +F + TQ+ L LSYN+L IP +F L +L L+L N
Sbjct: 59 IDLSNNRISTLSNQSF--SNM--TQLLTLILSYNRLR-CIPPRTFDGLKSLRLLSLHGN 112
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} Length = 193 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 2e-04
Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 12/68 (17%)
Query: 92 PLGI----MSIDLSNNSLK---GAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANL 144
P GI + L N + +DLS N++S + +SFS + L
Sbjct: 26 PKGIPRDVTELYLDGNQFTLVPKEL--SNY--KHLTLIDLSNNRIS-TLSNQSFSNMTQL 80
Query: 145 TFLNLSYN 152
L LSYN
Sbjct: 81 LTLILSYN 88
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 45.1 bits (107), Expect = 2e-05
Identities = 29/108 (26%), Positives = 40/108 (37%), Gaps = 17/108 (15%)
Query: 59 NPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCPLGIMS-------IDLSNNSLK----G 107
+ + R K+T L L +N + G+ + L+NN L G
Sbjct: 43 QSTGLATLSDATFRGLTKLTWLNLDYNQL-QTLSAGVFDDLTELGTLGLANNQLASLPLG 101
Query: 108 AFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFS 155
F D L TQ+ L L NQL +P F L L L L+ N
Sbjct: 102 VF--DHL--TQLDKLYLGGNQLKS-LPSGVFDRLTKLKELRLNTNQLQ 144
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 41.2 bits (97), Expect = 4e-04
Identities = 24/58 (41%), Positives = 30/58 (51%), Gaps = 9/58 (15%)
Query: 99 DLSNNSLK----GAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYN 152
L N LK G F D L T+++ L L+ NQL IP +F L NL L+LS N
Sbjct: 113 YLGGNQLKSLPSGVF--DRL--TKLKELRLNTNQLQ-SIPAGAFDKLTNLQTLSLSTN 165
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 2e-05
Identities = 32/224 (14%), Positives = 75/224 (33%), Gaps = 61/224 (27%)
Query: 255 YKGILRDG-----TRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRT 309
+KG+ V I++ + R+ + + H +++R+LG +
Sbjct: 30 HKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGL-CPGSS 88
Query: 310 RAIVTEWTNGGNVELWLSESAPSWKHR--LKVLIGVVEAMCYLQEQWPEVDY---DLRTG 364
+VT++ G++ + + + + L + + + M YL+E +L
Sbjct: 89 LQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEH----GMVHRNLAAR 144
Query: 365 SVLLTDNLEPLISRF---------KIEYQHRSTKY--------------------VYKFG 395
+VLL + ++ F + + K V+ +G
Sbjct: 145 NVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYG 204
Query: 396 LFLLEMIT----------NRRPLEEFERGEAGFIEYIRMHYPEN 429
+ + E++T + E+GE R+ P+
Sbjct: 205 VTVWELMTFGAEPYAGLRLAEVPDLLEKGE-------RLAQPQI 241
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 44.9 bits (107), Expect = 3e-05
Identities = 12/60 (20%), Positives = 25/60 (41%), Gaps = 3/60 (5%)
Query: 97 SIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSE 156
+++L + L FP + +Q + + L ++P ++ A L L L+ N
Sbjct: 85 ALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELP-DTMQQFAGLETLTLARNPLRA 141
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 3e-05
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 9/58 (15%)
Query: 99 DLSNNSLK----GAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYN 152
+++N L+ G F D L + L L NQL +P F L LT+L+L YN
Sbjct: 91 WVTDNKLQALPIGVF--DQL--VNLAELRLDRNQLK-SLPPRVFDSLTKLTYLSLGYN 143
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 4e-05
Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 9/61 (14%)
Query: 99 DLSNNSLK----GAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHF 154
L++N L+ G F L ++ L ++ N+L +P+ F L NL L L N
Sbjct: 67 YLNDNKLQTLPAGIF--KEL--KNLETLWVTDNKLQ-ALPIGVFDQLVNLAELRLDRNQL 121
Query: 155 S 155
Sbjct: 122 K 122
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 7e-05
Identities = 20/58 (34%), Positives = 25/58 (43%), Gaps = 9/58 (15%)
Query: 99 DLSNNSLK----GAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYN 152
L N LK F D L T++ L L YN+L +P F L +L L L N
Sbjct: 115 RLDRNQLKSLPPRVF--DSL--TKLTYLSLGYNELQ-SLPKGVFDKLTSLKELRLYNN 167
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 42.3 bits (100), Expect = 2e-04
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Query: 91 CPLGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLS 150
C S+D S+ L A P ++ T+ LDL N+LS +P ++F L L L L+
Sbjct: 14 CNNNKNSVDCSSKKLT-AIPSNIPADTKK--LDLQSNKLS-SLPSKAFHRLTKLRLLYLN 69
Query: 151 YNHFS 155
N
Sbjct: 70 DNKLQ 74
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 3e-04
Identities = 20/58 (34%), Positives = 25/58 (43%), Gaps = 9/58 (15%)
Query: 99 DLSNNSLK----GAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYN 152
L N L+ G F D L T ++ L L NQL +P +F L L L L N
Sbjct: 139 SLGYNELQSLPKGVF--DKL--TSLKELRLYNNQLKR-VPEGAFDKLTELKTLKLDNN 191
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 44.7 bits (106), Expect = 3e-05
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 9/62 (14%)
Query: 99 DLSNNSLK----GAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHF 154
D+S N L GA L ++Q L L N+L +P + L L+L+ N+
Sbjct: 106 DVSFNRLTSLPLGAL--RGL--GELQELYLKGNELK-TLPPGLLTPTPKLEKLSLANNNL 160
Query: 155 SE 156
+E
Sbjct: 161 TE 162
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 43.9 bits (104), Expect = 6e-05
Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 4/65 (6%)
Query: 97 SIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSE 156
++ +L A P D+ T I L LS N L + + LT LNL ++
Sbjct: 14 EVNCDKRNLT-ALPPDLPKDTTI--LHLSENLLY-TFSLATLMPYTRLTQLNLDRAELTK 69
Query: 157 MKVSD 161
++V
Sbjct: 70 LQVDG 74
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 43.6 bits (103), Expect = 8e-05
Identities = 16/58 (27%), Positives = 24/58 (41%), Gaps = 9/58 (15%)
Query: 99 DLSNNSLK----GAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYN 152
L N LK G +++ L L+ N L+ ++P + L NL L L N
Sbjct: 130 YLKGNELKTLPPGLL--TPT--PKLEKLSLANNNLT-ELPAGLLNGLENLDTLLLQEN 182
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 2e-04
Identities = 15/57 (26%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
Query: 99 DLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFS 155
LS N L ++ T++ L+L +L+ + V L L L+LS+N
Sbjct: 37 HLSENLLYTFSLATLMPYTRLTQLNLDRAELT-KLQV--DGTLPVLGTLDLSHNQLQ 90
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367 | Back alignment and structure |
|---|
Score = 45.1 bits (107), Expect = 3e-05
Identities = 24/111 (21%), Positives = 47/111 (42%), Gaps = 10/111 (9%)
Query: 253 AIYKGILRDG--TRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTR 310
G+ D +V ++ S + +F+ E ++ +F H+N++R +G + R
Sbjct: 90 GQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 149
Query: 311 AIVTEWTNGGNVELWLSESAPSWKHR--------LKVLIGVVEAMCYLQEQ 353
I+ E GG+++ +L E+ P L V + YL+E
Sbjct: 150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN 200
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291 | Back alignment and structure |
|---|
Score = 44.5 bits (106), Expect = 3e-05
Identities = 31/136 (22%), Positives = 51/136 (37%), Gaps = 16/136 (11%)
Query: 255 YKGILR----DGTRVKIEIYKGDV--SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRR 308
+G V ++ K DV E D+F+ E + H+NLIR+ G
Sbjct: 35 RRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGV-VLTP 93
Query: 309 TRAIVTEWTNGGNVELWLSESAPSWKHR--LKVLIGVVEAMCYLQEQWPEVDY---DLRT 363
+VTE G++ L + + + + V E M YL+ + + DL
Sbjct: 94 PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK----RFIHRDLAA 149
Query: 364 GSVLLTDNLEPLISRF 379
++LL I F
Sbjct: 150 RNLLLATRDLVKIGDF 165
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313 | Back alignment and structure |
|---|
Score = 44.2 bits (105), Expect = 5e-05
Identities = 22/114 (19%), Positives = 43/114 (37%), Gaps = 13/114 (11%)
Query: 253 AIYKGILRDGTRVKIEIYKGDV-SREIRDEFVEECKLLVQFQHKNLIRVLG-----WNNS 306
K +V ++ K D S+ +EF+ E + F H N+IR+LG +
Sbjct: 53 GNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQG 112
Query: 307 RRTRAIVTEWTNGGNVELWL-------SESAPSWKHRLKVLIGVVEAMCYLQEQ 353
++ + G++ +L + LK ++ + M YL +
Sbjct: 113 IPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR 166
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 43.9 bits (104), Expect = 6e-05
Identities = 19/88 (21%), Positives = 32/88 (36%), Gaps = 9/88 (10%)
Query: 75 PKITPLYLSFNFFWKYCPLG----IMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLS 130
+ L I I +N+ +K I L + L L+ N+L+
Sbjct: 24 AETIKDNLKKKSVTDAVTQNELNSIDQIIANNSDIKSVQGIQYL--PNVTKLFLNGNKLT 81
Query: 131 GDIPVESFSVLANLTFLNLSYNHFSEMK 158
DI + + L NL +L L N ++
Sbjct: 82 -DI--KPLANLKNLGWLFLDENKVKDLS 106
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 43.9 bits (104), Expect = 6e-05
Identities = 17/88 (19%), Positives = 33/88 (37%), Gaps = 9/88 (10%)
Query: 75 PKITPLYLSFNFFWKYCPLGIM----SIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLS 130
I + + + + + + L+ N L P+ L + L L N++
Sbjct: 46 NSIDQIIANNSDIKSVQGIQYLPNVTKLFLNGNKLTDIKPLANL--KNLGWLFLDENKVK 103
Query: 131 GDIPVESFSVLANLTFLNLSYNHFSEMK 158
D+ S L L L+L +N S++
Sbjct: 104 -DL--SSLKDLKKLKSLSLEHNGISDIN 128
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 42.3 bits (100), Expect = 2e-04
Identities = 21/87 (24%), Positives = 37/87 (42%), Gaps = 9/87 (10%)
Query: 75 PKITPLYLSFNFFWKYCPLG----IMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLS 130
+ L+L N L + S+ L +N + + L Q+++L L N+++
Sbjct: 90 KNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNGISDINGLVHL--PQLESLYLGNNKIT 147
Query: 131 GDIPVESFSVLANLTFLNLSYNHFSEM 157
DI S L L L+L N S++
Sbjct: 148 -DI--TVLSRLTKLDTLSLEDNQISDI 171
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 41.6 bits (98), Expect = 3e-04
Identities = 22/88 (25%), Positives = 38/88 (43%), Gaps = 9/88 (10%)
Query: 75 PKITPLYLSFNFFWKYCPLG----IMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLS 130
P +T L+L+ N PL + + L N +K + L ++++L L +N +S
Sbjct: 68 PNVTKLFLNGNKLTDIKPLANLKNLGWLFLDENKVKDLSSLKDL--KKLKSLSLEHNGIS 125
Query: 131 GDIPVESFSVLANLTFLNLSYNHFSEMK 158
DI L L L L N +++
Sbjct: 126 -DI--NGLVHLPQLESLYLGNNKITDIT 150
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 41.6 bits (98), Expect = 3e-04
Identities = 24/104 (23%), Positives = 41/104 (39%), Gaps = 9/104 (8%)
Query: 75 PKITPLYLSFNFFWKYCPLGIMS----IDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLS 130
P++ LYL N L ++ + L +N + P+ L T++Q L LS N +S
Sbjct: 134 PQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIVPLAGL--TKLQNLYLSKNHIS 191
Query: 131 GDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFL 174
D+ + + L NL L L ++ N+
Sbjct: 192 -DL--RALAGLKNLDVLELFSQECLNKPINHQSNLVVPNTVKNT 232
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290 | Back alignment and structure |
|---|
Score = 43.9 bits (104), Expect = 6e-05
Identities = 45/221 (20%), Positives = 81/221 (36%), Gaps = 41/221 (18%)
Query: 255 YKGI-LRDGTRVKI-EIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLG-WNNSRRTRA 311
YKG+ V E+ +++ R F EE ++L QH N++R W ++ + +
Sbjct: 43 YKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKK 102
Query: 312 ---IVTEWTNGGNVELWLSE-SAPSWKHRLKVLIGVVEAMCYLQEQWPEV---D------ 358
+VTE G ++ +L K +++ + +L + P + D
Sbjct: 103 CIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNI 162
Query: 359 -YDLRTGSVLLTDNLEPL-ISRFKIEYQHRS--------------TKY-----VYKFGLF 397
TGSV + D L ++ K ++ KY VY FG+
Sbjct: 163 FITGPTGSVKIGD----LGLATLKRASFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMC 218
Query: 398 LLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERM 438
+LEM T+ P E + + P + V +
Sbjct: 219 MLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEV 259
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 8e-05
Identities = 15/88 (17%), Positives = 31/88 (35%), Gaps = 9/88 (10%)
Query: 75 PKITPLYLSFNFFWKYCPLGIMS----IDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLS 130
L +S + N++++ + T ++ L LS+NQ+S
Sbjct: 19 ANAVKQNLGKQSVTDLVSQKELSGVQNFNGDNSNIQSLAGMQFF--TNLKELHLSHNQIS 76
Query: 131 GDIPVESFSVLANLTFLNLSYNHFSEMK 158
D+ L L L+++ N +
Sbjct: 77 -DL--SPLKDLTKLEELSVNRNRLKNLN 101
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 41.2 bits (97), Expect = 4e-04
Identities = 18/91 (19%), Positives = 33/91 (36%), Gaps = 8/91 (8%)
Query: 71 LRSRPKITPLYLSFNFFWKYCPLGIMSI---DLSNNSLKGAFPIDVLLCTQIQALDLSYN 127
L+ K+ L ++ N + + L NN L+ + L ++ L + N
Sbjct: 81 LKDLTKLEELSVNRNRLKNLNGIPSACLSRLFLDNNELRDTDSLIHL--KNLEILSIRNN 138
Query: 128 QLSGDIPVESFSVLANLTFLNLSYNHFSEMK 158
+L I L+ L L+L N +
Sbjct: 139 KLK-SI--VMLGFLSKLEVLDLHGNEITNTG 166
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A Length = 272 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 9e-05
Identities = 19/56 (33%), Positives = 22/56 (39%), Gaps = 7/56 (12%)
Query: 99 DLSNNSLK--GAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYN 152
L N L A L T + L L+ NQL +P F L NL L L N
Sbjct: 69 ALGGNKLHDISAL--KEL--TNLTYLILTGNQLQS-LPNGVFDKLTNLKELVLVEN 119
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A Length = 272 | Back alignment and structure |
|---|
Score = 40.4 bits (95), Expect = 8e-04
Identities = 31/105 (29%), Positives = 46/105 (43%), Gaps = 21/105 (20%)
Query: 59 NPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCPLGIM-------SIDLSNNSLK----G 107
N + ++S I P + L L N K + + + L+ N L+ G
Sbjct: 49 NNSDIKSVQGIQ--YLPNVRYLALGGN---KLHDISALKELTNLTYLILTGNQLQSLPNG 103
Query: 108 AFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYN 152
F D L T ++ L L NQL +P F L NLT+LNL++N
Sbjct: 104 VF--DKL--TNLKELVLVENQLQ-SLPDGVFDKLTNLTYLNLAHN 143
|
| >3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289 | Back alignment and structure |
|---|
Score = 43.4 bits (103), Expect = 9e-05
Identities = 27/142 (19%), Positives = 50/142 (35%), Gaps = 26/142 (18%)
Query: 253 AIYKGILRDG--TRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTR 310
G V I+ K +R+EF E L + QH N++ +LG +
Sbjct: 28 GHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPL 87
Query: 311 AIVTEWTNGGNVELWLSESAPSWKHR-----------------LKVLIGVVEAMCYLQEQ 353
+++ + + G++ +L +P + ++ + M YL
Sbjct: 88 SMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH 147
Query: 354 WPEVDY---DLRTGSVLLTDNL 372
DL T +VL+ D L
Sbjct: 148 ----HVVHKDLATRNVLVYDKL 165
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 43.7 bits (103), Expect = 1e-04
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 6/60 (10%)
Query: 97 SIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSE 156
+ +S N L + P +L + + +L + NQL+ +P ES L++ T +NL N SE
Sbjct: 245 ELMVSGNRLT-SLP---MLPSGLLSLSVYRNQLT-RLP-ESLIHLSSETTVNLEGNPLSE 298
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 43.3 bits (102), Expect = 1e-04
Identities = 12/60 (20%), Positives = 27/60 (45%), Gaps = 6/60 (10%)
Query: 97 SIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSE 156
++ + +N+L + L +++ L++S NQL+ +P L L+ + H
Sbjct: 65 TLVIPDNNLTS---LPALP-PELRTLEVSGNQLT-SLP-VLPPGLLELSIFSNPLTHLPA 118
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 41.4 bits (97), Expect = 7e-04
Identities = 13/85 (15%), Positives = 27/85 (31%), Gaps = 13/85 (15%)
Query: 75 PKITPLYLSFNFFWKYCPLGI---MSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSG 131
IT L + N P ++++S N L + P+ ++ L
Sbjct: 61 AHITTLVIPDNNL-TSLPALPPELRTLEVSGNQLT-SLPVLPPGLLELSIFSNPLTHLP- 117
Query: 132 DIPVESFSVLANLTFLNLSYNHFSE 156
++ + L L + N +
Sbjct: 118 -------ALPSGLCKLWIFGNQLTS 135
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 1e-04
Identities = 27/128 (21%), Positives = 54/128 (42%), Gaps = 13/128 (10%)
Query: 253 AIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLG--WNNSRRT 309
Y + G V ++ + +RD F E ++L QH N+++ G ++ RR
Sbjct: 60 CRYDPLQDNTGEVVAVKKLQHSTEEHLRD-FEREIEILKSLQHDNIVKYKGVCYSAGRRN 118
Query: 310 RAIVTEWTNGGNVELWLSESAPSWKHR--LKVLIGVVEAMCYLQEQWPEVDY---DLRTG 364
++ E+ G++ +L + H L+ + + M YL + Y DL T
Sbjct: 119 LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK----RYIHRDLATR 174
Query: 365 SVLLTDNL 372
++L+ +
Sbjct: 175 NILVENEN 182
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323 | Back alignment and structure |
|---|
Score = 43.1 bits (102), Expect = 1e-04
Identities = 15/117 (12%), Positives = 46/117 (39%), Gaps = 18/117 (15%)
Query: 255 YKGILRDG----TRVKIEIYKGDV-SREIRDEFVEECKLLVQFQHKNLIRVLG------W 303
+ L+ +V +++ K D+ + +EF+ E + +F H ++ +++G
Sbjct: 40 REAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRA 99
Query: 304 NNSRRTRAIVTEWTNGGNVELWL-------SESAPSWKHRLKVLIGVVEAMCYLQEQ 353
++ + G++ +L + + ++ ++ + M YL +
Sbjct: 100 KGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR 156
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295 | Back alignment and structure |
|---|
Score = 43.0 bits (102), Expect = 1e-04
Identities = 27/128 (21%), Positives = 54/128 (42%), Gaps = 13/128 (10%)
Query: 253 AIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLG--WNNSRRT 309
Y + G V ++ + +RD F E ++L QH N+++ G ++ RR
Sbjct: 29 CRYDPLQDNTGEVVAVKKLQHSTEEHLRD-FEREIEILKSLQHDNIVKYKGVCYSAGRRN 87
Query: 310 RAIVTEWTNGGNVELWLSESAPSWKHR--LKVLIGVVEAMCYLQEQWPEVDY---DLRTG 364
++ E+ G++ +L + H L+ + + M YL + Y DL T
Sbjct: 88 LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK----RYIHRDLATR 143
Query: 365 SVLLTDNL 372
++L+ +
Sbjct: 144 NILVENEN 151
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322 | Back alignment and structure |
|---|
Score = 42.7 bits (101), Expect = 2e-04
Identities = 26/133 (19%), Positives = 59/133 (44%), Gaps = 14/133 (10%)
Query: 253 AIYKGILRDG--TRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTR 310
+ KG+++D TRV I+ S R EF+ E ++ +F +++R+LG + +
Sbjct: 44 GVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPT 103
Query: 311 AIVTEWTNGGNVELWLSESAPSWKHR-----------LKVLIGVVEAMCYLQEQWPEVDY 359
++ E G+++ +L P+ + +++ + + M YL V
Sbjct: 104 LVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYL-NANKFVHR 162
Query: 360 DLRTGSVLLTDNL 372
DL + ++ ++
Sbjct: 163 DLAARNCMVAEDF 175
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 40.8 bits (96), Expect = 2e-04
Identities = 21/111 (18%), Positives = 39/111 (35%), Gaps = 12/111 (10%)
Query: 52 HLCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCPLGIM----SIDLSNNSLKG 107
NE K + F +++ L L + ++LS+N + G
Sbjct: 27 SRSNEGKLEGLTDEFEELEF--------LSTINVGLTSIANLPKLNKLKKLELSDNRVSG 78
Query: 108 AFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMK 158
+ C + L+LS N++ +E L NL L+L + +
Sbjct: 79 GLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLN 129
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I Length = 461 | Back alignment and structure |
|---|
Score = 43.0 bits (102), Expect = 2e-04
Identities = 31/153 (20%), Positives = 49/153 (32%), Gaps = 43/153 (28%)
Query: 25 HNPSLKYCNSSSPMDL--NEIFKSTIVASHLCNESKNPNCVESFPKIDLRSRPKITPLYL 82
NP+L ++L NE+ + + + P+C KI L L
Sbjct: 54 VNPALAE------LNLRSNEL--GDVGVHCVLQGLQTPSC-------------KIQKLSL 92
Query: 83 SFNFF----WKY-------CPLGIMSIDLSNNSL--KGAFPIDVLL---CTQIQALDLSY 126
P + + LS+N L G + L +++ L L Y
Sbjct: 93 QNCCLTGAGCGVLSSTLRTLP-TLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEY 151
Query: 127 NQLSGDIPVESFSVLA---NLTFLNLSYNHFSE 156
LS SVL + L +S N +E
Sbjct: 152 CSLSAASCEPLASVLRAKPDFKELTVSNNDINE 184
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 40.9 bits (96), Expect = 2e-04
Identities = 20/109 (18%), Positives = 35/109 (32%), Gaps = 12/109 (11%)
Query: 54 CNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCPLGIM----SIDLSNNSLKGAF 109
N+ K F ++ L L L + ++LS N + G
Sbjct: 36 SNDGKIEGLTAEFVNLEF--------LSLINVGLISVSNLPKLPKLKKLELSENRIFGGL 87
Query: 110 PIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMK 158
+ + L+LS N+L +E L L L+L + +
Sbjct: 88 DMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLN 136
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} Length = 362 | Back alignment and structure |
|---|
Score = 42.4 bits (100), Expect = 2e-04
Identities = 19/108 (17%), Positives = 36/108 (33%), Gaps = 24/108 (22%)
Query: 71 LRSRPK-ITPLYLSFNFFW-----------KYCPLGIMSIDLSNNSL--KGAFPIDVLL- 115
L S P +T L LS N P ++S++L N L + +L
Sbjct: 191 LASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLENLKLLKD 250
Query: 116 -CTQIQALDLSYNQLSGDIPVESFSVLA-------NLTFLNLSYNHFS 155
+Q + L Y+ + ++ E L + ++ +
Sbjct: 251 SLKHLQTVYLDYDIV-KNMSKEQCKALGAAFPNIQKIILVDKNGKEIH 297
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} Length = 362 | Back alignment and structure |
|---|
Score = 40.5 bits (95), Expect = 9e-04
Identities = 26/132 (19%), Positives = 38/132 (28%), Gaps = 43/132 (32%)
Query: 50 ASHLCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFF-----------WKYCPLGIMSI 98
+ L IT L L +N F + P I S+
Sbjct: 97 SDELVKTLAAIPF-------------TITVLDLGWNDFSSKSSSEFKQAFSNLPASITSL 143
Query: 99 DLSNNSL--KGAFPIDVLLC-------TQIQALDLSYNQLSGDIPVESF-SVLAN----L 144
+L N L K + L + +L+L N L LA+ +
Sbjct: 144 NLRGNDLGIKSS----DELIQILAAIPANVNSLNLRGNNL-ASKNCAELAKFLASIPASV 198
Query: 145 TFLNLSYNHFSE 156
T L+LS N
Sbjct: 199 TSLDLSANLLGL 210
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Length = 198 | Back alignment and structure |
|---|
Score = 41.2 bits (97), Expect = 3e-04
Identities = 26/99 (26%), Positives = 40/99 (40%), Gaps = 14/99 (14%)
Query: 68 KID--LRSRPKITPLYLSFNFFWKYCPLGIMS----IDLSNNSLKGAFPIDVL--LCTQI 119
K+D L + L LS N K L M + L N +K I+ L + +
Sbjct: 39 KMDATLSTLKACKHLALSTNNIEKISSLSGMENLRILSLGRNLIKK---IENLDAVADTL 95
Query: 120 QALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMK 158
+ L +SYNQ++ + L NL L +S N +
Sbjct: 96 EELWISYNQIAS---LSGIEKLVNLRVLYMSNNKITNWG 131
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 42.0 bits (98), Expect = 3e-04
Identities = 11/62 (17%), Positives = 25/62 (40%), Gaps = 2/62 (3%)
Query: 95 IMSIDLSNNSLKGAFPIDVLL-CTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNH 153
+ + + N + L +++ L + + L + ++F L+ LNLS+N
Sbjct: 33 LTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLR-FVAPDAFHFTPRLSRLNLSFNA 91
Query: 154 FS 155
Sbjct: 92 LE 93
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} Length = 208 | Back alignment and structure |
|---|
Score = 40.0 bits (94), Expect = 6e-04
Identities = 32/105 (30%), Positives = 43/105 (40%), Gaps = 17/105 (16%)
Query: 59 NPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCPLGIM-------SIDLSNNSLK----G 107
N ++S P +T LYL N P G+ ++LS N L+ G
Sbjct: 36 ETNSLKSLPNGVFDELTSLTQLYLGGNKLQSL-PNGVFNKLTSLTYLNLSTNQLQSLPNG 94
Query: 108 AFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYN 152
F D L TQ++ L L+ NQL +P F L L L L N
Sbjct: 95 VF--DKL--TQLKELALNTNQLQS-LPDGVFDKLTQLKDLRLYQN 134
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327 | Back alignment and structure |
|---|
Score = 40.8 bits (96), Expect = 7e-04
Identities = 20/130 (15%), Positives = 42/130 (32%), Gaps = 17/130 (13%)
Query: 255 YKGILR-----DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLG--WNNSR 307
G V ++ + + RD F E ++L +++ G + R
Sbjct: 40 ELCRYDPLGDNTGALVAVKQLQHSGPDQQRD-FQREIQILKALHSDFIVKYRGVSYGPGR 98
Query: 308 RTRAIVTEWTNGGNVELWLSESAPSWKHR--LKVLIGVVEAMCYLQEQWPEVDY---DLR 362
++ +V E+ G + +L L + + M YL + DL
Sbjct: 99 QSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSR----RCVHRDLA 154
Query: 363 TGSVLLTDNL 372
++L+
Sbjct: 155 ARNILVESEA 164
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A Length = 386 | Back alignment and structure |
|---|
Score = 40.9 bits (96), Expect = 7e-04
Identities = 14/75 (18%), Positives = 27/75 (36%), Gaps = 13/75 (17%)
Query: 95 IMSIDLSNNSL--KGAFPI-DVLL-CTQIQALDLSYNQLS--GDIPVESFSVLA------ 142
+ I LS N++ + A + + + ++ + S D E+ +L
Sbjct: 34 VKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKC 93
Query: 143 -NLTFLNLSYNHFSE 156
L + LS N F
Sbjct: 94 PKLHTVRLSDNAFGP 108
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343 | Back alignment and structure |
|---|
Score = 40.8 bits (96), Expect = 8e-04
Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 8/61 (13%)
Query: 250 EGA------AIYKGILRDG--TRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVL 301
EGA A G+L T V +++ K + S +++ +F E L+ +F + N++++L
Sbjct: 57 EGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLL 116
Query: 302 G 302
G
Sbjct: 117 G 117
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 508 | |||
| 3omv_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 4asz_A | 299 | BDNF/NT-3 growth factors receptor; transferase, TR | 100.0 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 100.0 | |
| 4gt4_A | 308 | Tyrosine-protein kinase transmembrane receptor RO; | 100.0 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 100.0 | |
| 4fih_A | 346 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 4b9d_A | 350 | Serine/threonine-protein kinase NEK1; transferase, | 100.0 | |
| 3fpq_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 4ase_A | 353 | Vascular endothelial growth factor receptor 2; tra | 100.0 | |
| 3hmm_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 3hyh_A | 275 | Carbon catabolite-derepressing protein kinase; kin | 100.0 | |
| 4fie_A | 423 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 4aw0_A | 311 | HPDK1, 3-phosphoinositide-dependent protein kinase | 100.0 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 3ubd_A | 304 | Ribosomal protein S6 kinase alpha-3; kinase-inhibi | 100.0 | |
| 4b99_A | 398 | Mitogen-activated protein kinase 7; transferase, i | 100.0 | |
| 4f9c_A | 361 | Cell division cycle 7-related protein kinase; Ser/ | 100.0 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 100.0 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 100.0 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 100.0 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 100.0 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 100.0 | |
| 3v5w_A | 689 | G-protein coupled receptor kinase 2; inhibitor com | 100.0 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 100.0 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 100.0 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 100.0 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 100.0 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 100.0 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 100.0 | |
| 4hcu_A | 269 | Tyrosine-protein kinase ITK/TSK; transferase-trans | 100.0 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 100.0 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 100.0 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 100.0 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 100.0 | |
| 3zgw_A | 347 | Maternal embryonic leucine zipper kinase; transfer | 100.0 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 100.0 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 100.0 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 100.0 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 100.0 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 100.0 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 100.0 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 100.0 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 100.0 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 100.0 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 100.0 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 100.0 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 100.0 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 100.0 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 100.0 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 100.0 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 100.0 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 100.0 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 100.0 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 100.0 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 100.0 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 100.0 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 100.0 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 100.0 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 100.0 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 100.0 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 100.0 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 2izr_A | 330 | Casein kinase I isoform gamma-3; serine/threonine- | 100.0 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 100.0 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 100.0 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 100.0 | |
| 1csn_A | 298 | Casein kinase-1; phosphotransferase; HET: ATP; 2.0 | 100.0 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 100.0 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 100.0 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 100.0 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 100.0 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 100.0 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 100.0 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 100.0 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 100.0 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 100.0 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 100.0 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 100.0 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 100.0 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 100.0 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 100.0 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 100.0 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 100.0 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 100.0 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 100.0 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 100.0 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 100.0 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 100.0 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 100.0 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 100.0 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 100.0 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 100.0 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 100.0 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 100.0 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 100.0 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 100.0 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 100.0 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 100.0 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 100.0 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 100.0 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 100.0 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 100.0 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 100.0 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 100.0 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 100.0 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 100.0 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 100.0 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 100.0 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 100.0 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 100.0 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 100.0 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 100.0 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 100.0 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 100.0 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 100.0 | |
| 4hgt_A | 296 | Casein kinase I isoform delta; CK1D, inhibitor, tr | 100.0 | |
| 3uzp_A | 296 | CKI-delta, CKID, casein kinase I isoform delta; CK | 100.0 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 100.0 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 100.0 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 100.0 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 100.0 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 100.0 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 100.0 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 100.0 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 100.0 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 100.0 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 100.0 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 100.0 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 100.0 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 100.0 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 100.0 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 100.0 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 100.0 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 100.0 | |
| 3llt_A | 360 | Serine/threonine kinase-1, pflammer; lammer kinase | 100.0 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 100.0 | |
| 2jii_A | 352 | Serine/threonine-protein kinase VRK3 molecule: VA | 100.0 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 100.0 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 100.0 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 100.0 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 100.0 | |
| 3oz6_A | 388 | Mitogen-activated protein kinase 1, serine/threon | 100.0 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 100.0 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 100.0 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 100.0 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 100.0 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 100.0 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 100.0 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 100.0 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 100.0 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 100.0 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 100.0 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 100.0 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 100.0 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 100.0 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 100.0 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 100.0 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 100.0 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 100.0 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 100.0 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 100.0 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 100.0 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 100.0 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 100.0 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 100.0 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 100.0 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 100.0 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 100.0 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 100.0 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 100.0 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 100.0 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 100.0 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 100.0 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 100.0 | |
| 4fl3_A | 635 | Tyrosine-protein kinase SYK; transferase; HET: ANP | 100.0 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 100.0 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 100.0 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 100.0 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 100.0 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 100.0 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 100.0 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 100.0 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 100.0 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 100.0 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 100.0 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 100.0 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 100.0 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 100.0 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 100.0 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 100.0 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 100.0 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 100.0 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 100.0 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 100.0 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 100.0 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 100.0 | |
| 3sv0_A | 483 | Casein kinase I-like; typical kinase domain fold, | 100.0 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 100.0 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 100.0 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 100.0 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 100.0 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 100.0 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 100.0 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 100.0 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 100.0 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 100.0 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 100.0 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 100.0 | |
| 4exu_A | 371 | Mitogen-activated protein kinase 13; P38 kinase, t | 100.0 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 100.0 | |
| 3kvw_A | 429 | DYRK2, dual specificity tyrosine-phosphorylation-r | 100.0 | |
| 1z57_A | 339 | Dual specificity protein kinase CLK1; protein tyro | 100.0 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 100.0 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 100.0 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 100.0 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 100.0 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 100.0 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 100.0 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 100.0 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 100.0 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 100.0 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 100.0 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 100.0 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 100.0 | |
| 2eu9_A | 355 | Dual specificity protein kinase CLK3; kinase domai | 100.0 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 100.0 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 100.0 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 100.0 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 100.0 | |
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 100.0 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 100.0 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 100.0 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 100.0 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 99.97 | |
| 4azs_A | 569 | Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15 | 99.93 | |
| 3en9_A | 540 | Glycoprotease, O-sialoglycoprotein endopeptidase/p | 99.88 | |
| 1zar_A | 282 | RIO2 kinase; serine kinase, winged-helix, RIO doma | 99.87 | |
| 1zth_A | 258 | RIO1 serine protein kinase; ribosome biogenesis, r | 99.81 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 99.74 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 99.72 | |
| 4gyi_A | 397 | RIO2 kinase; protein kinase, ADP complex, phosphoa | 99.7 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 99.68 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 99.68 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 99.64 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 99.63 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 99.63 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 99.63 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 99.62 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 99.61 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 99.61 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 99.61 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 99.6 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 99.59 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 99.59 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 99.58 | |
| 4g8a_A | 635 | TOLL-like receptor 4; leucine rich repeat MD-2 rel | 99.57 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 99.57 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 99.57 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 99.57 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 99.56 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 99.56 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 99.56 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 99.55 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 99.55 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 99.55 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 99.55 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 99.54 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 99.54 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 99.53 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 99.52 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 99.51 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.51 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.5 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 99.5 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 99.5 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 99.49 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 99.49 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 99.49 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 99.49 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 99.47 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 99.47 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 99.47 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 99.47 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 99.47 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 99.47 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 99.47 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 99.47 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 99.46 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.46 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 99.45 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 99.45 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.45 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 99.45 | |
| 3g39_A | 170 | Variable lymphocyte receptor VLRB.2D; antibody, X- | 99.44 | |
| 4g8a_A | 635 | TOLL-like receptor 4; leucine rich repeat MD-2 rel | 99.44 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 99.44 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 99.44 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 99.44 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 99.42 | |
| 2r9u_A | 174 | Variable lymphocyte receptor; adaptive immunity, V | 99.42 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 99.42 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 99.41 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 99.41 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 99.41 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 99.41 | |
| 3g39_A | 170 | Variable lymphocyte receptor VLRB.2D; antibody, X- | 99.41 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 99.4 | |
| 2r9u_A | 174 | Variable lymphocyte receptor; adaptive immunity, V | 99.4 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 99.4 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 99.39 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 99.39 | |
| 3tm0_A | 263 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.39 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 99.39 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 99.39 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.38 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 99.38 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 99.38 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.37 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 99.37 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 99.37 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 99.37 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 99.37 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 99.36 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 99.36 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 99.36 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 99.35 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 99.35 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 99.35 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 99.35 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 99.34 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 99.34 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 99.34 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 99.33 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 99.33 | |
| 4glp_A | 310 | Monocyte differentiation antigen CD14; alpha beta | 99.33 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 99.32 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 99.32 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 99.32 | |
| 4b8c_D | 727 | Glucose-repressible alcohol dehydrogenase transcr | 99.31 | |
| 4glp_A | 310 | Monocyte differentiation antigen CD14; alpha beta | 99.31 | |
| 1nd4_A | 264 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.3 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 99.3 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 99.3 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.29 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 99.29 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 99.28 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.28 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 99.27 | |
| 4b8c_D | 727 | Glucose-repressible alcohol dehydrogenase transcr | 99.26 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 99.25 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 99.25 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 99.24 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 99.24 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 99.23 | |
| 3dxp_A | 359 | Putative acyl-COA dehydrogenase; protein kinase-li | 99.22 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 99.22 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 99.21 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 99.21 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 99.2 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 99.19 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 99.19 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 99.18 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 99.17 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 99.16 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 99.12 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 99.12 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 99.12 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 99.11 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 99.09 | |
| 2ca6_A | 386 | RAN GTPase-activating protein 1; GAP, GTPase activ | 99.02 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 99.01 | |
| 3goz_A | 362 | Leucine-rich repeat-containing protein; LEGL7, NES | 98.99 | |
| 2ast_B | 336 | S-phase kinase-associated protein 2; SCF-substrate | 98.99 | |
| 2ca6_A | 386 | RAN GTPase-activating protein 1; GAP, GTPase activ | 98.95 | |
| 3sg8_A | 304 | APH(2'')-ID; antibiotic resistance enzyme, transfe | 98.94 | |
| 3r70_A | 320 | Aminoglycoside phosphotransferase; structural geno | 98.92 | |
| 2ast_B | 336 | S-phase kinase-associated protein 2; SCF-substrate | 98.88 | |
| 3goz_A | 362 | Leucine-rich repeat-containing protein; LEGL7, NES | 98.88 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 98.77 | |
| 3tdw_A | 306 | Gentamicin resistance protein; kinase, phosphoryl | 98.67 | |
| 3sb4_A | 329 | Hypothetical leucine rich repeat protein; LRR, rig | 98.63 | |
| 3sb4_A | 329 | Hypothetical leucine rich repeat protein; LRR, rig | 98.58 | |
| 4gkh_A | 272 | Aminoglycoside 3'-phosphotransferase APHA1-IAB; py | 98.58 | |
| 3d1u_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 98.54 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 98.52 | |
| 3ovc_A | 362 | Hygromycin-B 4-O-kinase; aminoglycoside phosphotra | 98.51 | |
| 3ats_A | 357 | Putative uncharacterized protein; hypothetical pro | 98.3 | |
| 2olc_A | 397 | MTR kinase, methylthioribose kinase; kinase ADP-2H | 98.28 | |
| 3un9_A | 372 | NLR family member X1; leucine rich repeat (LRR), a | 98.27 | |
| 3rw6_A | 267 | Nuclear RNA export factor 1; retroviral constituti | 98.25 | |
| 4fdw_A | 401 | Leucine rich hypothetical protein; putative cell s | 98.22 | |
| 3rw6_A | 267 | Nuclear RNA export factor 1; retroviral constituti | 98.21 | |
| 3un9_A | 372 | NLR family member X1; leucine rich repeat (LRR), a | 98.2 | |
| 2q83_A | 346 | YTAA protein; 2635576, structural genomics, joint | 98.2 | |
| 4fdw_A | 401 | Leucine rich hypothetical protein; putative cell s | 98.08 | |
| 1io0_A | 185 | Tropomodulin; LRR protein, right-handed super-heli | 97.92 | |
| 3csv_A | 333 | Aminoglycoside phosphotransferase; YP_614837.1, ph | 97.91 | |
| 3jr1_A | 312 | Putative fructosamine-3-kinase; YP_719053.1, struc | 97.85 | |
| 1io0_A | 185 | Tropomodulin; LRR protein, right-handed super-heli | 97.85 | |
| 2pyw_A | 420 | Uncharacterized protein; 5-methylthioribose kinase | 97.8 | |
| 1zyl_A | 328 | Hypothetical protein YIHE; putative protein kinase | 97.79 | |
| 3dxq_A | 301 | Choline/ethanolamine kinase family protein; NP_106 | 97.79 | |
| 3f7w_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 97.69 | |
| 2ppq_A | 322 | HSK, HK, homoserine kinase; structural genomics, M | 97.65 | |
| 3ogk_B | 592 | Coronatine-insensitive protein 1; leucine rich rep | 97.64 | |
| 3ogk_B | 592 | Coronatine-insensitive protein 1; leucine rich rep | 97.63 | |
| 3rfe_A | 130 | Platelet glycoprotein IB beta chain; platelet surf | 97.45 | |
| 2p1m_B | 594 | Transport inhibitor response 1 protein; F-BOX, leu | 97.34 | |
| 1nw1_A | 429 | Choline kinase (49.2 KD); phospholipid synthesis, | 97.32 | |
| 3i1a_A | 339 | Spectinomycin phosphotransferase; protein kinase, | 97.24 | |
| 2ra8_A | 362 | Uncharacterized protein Q64V53_bacfr; WGR domain, | 97.21 | |
| 3feg_A | 379 | Choline/ethanolamine kinase; non-protein kinase, c | 97.18 | |
| 2p1m_B | 594 | Transport inhibitor response 1 protein; F-BOX, leu | 97.1 | |
| 2ra8_A | 362 | Uncharacterized protein Q64V53_bacfr; WGR domain, | 97.06 | |
| 4fs7_A | 394 | Uncharacterized protein; leucine-rich repeats, pro | 96.98 | |
| 3c5i_A | 369 | Choline kinase; choline, kinase, malaria, transfer | 96.97 | |
| 2qg7_A | 458 | Ethanolamine kinase PV091845; malaria, SGC, struct | 96.61 | |
| 3rfe_A | 130 | Platelet glycoprotein IB beta chain; platelet surf | 96.61 | |
| 4h09_A | 379 | Hypothetical leucine rich repeat protein; two LRR_ | 96.35 | |
| 3f2s_A | 401 | CK, chetk-alpha, choline kinase alpha; non-protein | 96.33 | |
| 4gt6_A | 394 | Cell surface protein; leucine rich repeats, putati | 96.26 | |
| 3e4g_A | 176 | ATP synthase subunit S, mitochondrial; leucine-ric | 96.23 | |
| 3e4g_A | 176 | ATP synthase subunit S, mitochondrial; leucine-ric | 95.86 | |
| 3mes_A | 424 | Choline kinase; malaria, structural genomics, stru | 95.66 | |
| 2yle_A | 229 | Protein spire homolog 1; actin-binding protein, ac | 95.54 | |
| 4gt6_A | 394 | Cell surface protein; leucine rich repeats, putati | 95.47 | |
| 4h09_A | 379 | Hypothetical leucine rich repeat protein; two LRR_ | 95.39 | |
| 4fs7_A | 394 | Uncharacterized protein; leucine-rich repeats, pro | 95.31 | |
| 1pgv_A | 197 | TMD-1, tropomodulin TMD-1; structural genomics, PS | 95.11 | |
| 1pgv_A | 197 | TMD-1, tropomodulin TMD-1; structural genomics, PS | 94.66 | |
| 3g15_A | 401 | CK, chetk-alpha, choline kinase alpha; non-protein | 94.27 | |
| 4ann_A | 215 | ESSB; membrane protein, membrane secretion, ESS ty | 92.66 | |
| 4ano_A | 219 | ESSB; membrane protein, membrane secretion, ESS ty | 90.07 | |
| 3cxl_A | 463 | N-chimerin; SH2, RHO-GAP, structural genomics cons | 83.3 |
| >3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-49 Score=389.68 Aligned_cols=233 Identities=20% Similarity=0.307 Sum_probs=189.3
Q ss_pred cCCCCCceeeecCCeEEEEEEECCCCEEEEEEecCC-CCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEee
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGD-VSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEW 316 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 316 (508)
++++..++||+|+||+||+|++. ..||||+++.. ...+..+.|.+|++++++++|||||+++|++.+ +..+|||||
T Consensus 36 ~~l~l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy 112 (307)
T 3omv_A 36 SEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQW 112 (307)
T ss_dssp TSCCEEEECCCCSSSEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred HHeEEeeEEeeCCCcEEEEEEEC--CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEc
Confidence 56778899999999999999975 36999999643 344567889999999999999999999998865 568999999
Q ss_pred cCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-----------
Q 045127 317 TNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY----------- 383 (508)
Q Consensus 317 ~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~----------- 383 (508)
|++|+|.+++. ...+++.++..|+.|||.||+|||++ +||||||||+|||+++++.+||+|||+++
T Consensus 113 ~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~-~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~ 191 (307)
T 3omv_A 113 CEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAK-NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQV 191 (307)
T ss_dssp CSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHT-TCBCSCCCSSSEEEETTEEEEECCCSSCBC----------
T ss_pred CCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CccCCccCHHHEEECCCCcEEEeeccCceecccCCcceee
Confidence 99999999996 56799999999999999999999999 99999999999999999999999999742
Q ss_pred ---------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCc
Q 045127 384 ---------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTE 442 (508)
Q Consensus 384 ---------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 442 (508)
.++.++|||||||++|||+||+.||....... .+...+.... ..+.+...
T Consensus 192 ~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~-~~~~~~~~~~-------~~p~~~~~- 262 (307)
T 3omv_A 192 EQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD-QIIFMVGRGY-------ASPDLSKL- 262 (307)
T ss_dssp --CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH-HHHHHHHTTC-------CCCCSTTS-
T ss_pred cccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHH-HHHHHHhcCC-------CCCCcccc-
Confidence 25668999999999999999999997543221 1111121111 11111100
Q ss_pred chHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhCC
Q 045127 443 NMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSCP 484 (508)
Q Consensus 443 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 484 (508)
.......+.+++.+||+.||++||||.||++.|+.+..+.+
T Consensus 263 -~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~lp 303 (307)
T 3omv_A 263 -YKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLP 303 (307)
T ss_dssp -CTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTCC
T ss_pred -cccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccCC
Confidence 01234567889999999999999999999999998876654
|
| >4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-49 Score=390.05 Aligned_cols=231 Identities=20% Similarity=0.304 Sum_probs=191.3
Q ss_pred cCCCCCceeeecCCeEEEEEEEC------CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeE
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILR------DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRA 311 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 311 (508)
++|...+.||+|+||+||+|++. ++..||||+++.. .....++|.+|+++|++++|||||+++|++.+++..+
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~-~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~ 91 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA-SDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI 91 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCC-ChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEE
Confidence 45777899999999999999874 3678999999654 4456788999999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHhcc--------------CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEe
Q 045127 312 IVTEWTNGGNVELWLSE--------------SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLIS 377 (508)
Q Consensus 312 lv~e~~~~gsL~~~l~~--------------~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~ 377 (508)
+|||||++|+|.++++. ..++|.++..|+.||++||+|||++ +|+||||||+|||+++++.+||+
T Consensus 92 lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~-~iiHRDlKp~NILl~~~~~~Ki~ 170 (299)
T 4asz_A 92 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ-HFVHRDLATRNCLVGENLLVKIG 170 (299)
T ss_dssp EEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECGGGCEEEC
T ss_pred EEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCccCHhhEEECCCCcEEEC
Confidence 99999999999999962 3689999999999999999999999 99999999999999999999999
Q ss_pred eccCC-----------------------------CCCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhcc
Q 045127 378 RFKIE-----------------------------YQHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYP 427 (508)
Q Consensus 378 Dfg~~-----------------------------~~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~ 427 (508)
|||++ ..++.++|||||||++|||+| |+.||...... .+...+.....
T Consensus 171 DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~--~~~~~i~~~~~ 248 (299)
T 4asz_A 171 DFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN--EVIECITQGRV 248 (299)
T ss_dssp CCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH--HHHHHHHHTCC
T ss_pred CcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHHcCCC
Confidence 99874 356788999999999999999 89999764322 12222221110
Q ss_pred chhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhCCC
Q 045127 428 ENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSCPI 485 (508)
Q Consensus 428 ~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~ 485 (508)
+..+ .....++.+++.+||+.||++|||++||.+.|+++.+..+.
T Consensus 249 ----------~~~p---~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~~p~ 293 (299)
T 4asz_A 249 ----------LQRP---RTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKASPV 293 (299)
T ss_dssp ----------CCCC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSCC
T ss_pred ----------CCCC---ccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhcCCc
Confidence 1111 12245678899999999999999999999999999876553
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-49 Score=391.09 Aligned_cols=230 Identities=20% Similarity=0.274 Sum_probs=189.9
Q ss_pred cCCCCCceeeecCCeEEEEEEEC------CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeE
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILR------DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRA 311 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 311 (508)
++|...++||+|+||.||+|++. +++.||||+++.. .....++|.+|+++|++++|||||+++|++.+++..+
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~-~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~ 119 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA-SESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLL 119 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCC-SHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcC-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence 45667789999999999999874 4788999999643 4556788999999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHhcc----------------CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceE
Q 045127 312 IVTEWTNGGNVELWLSE----------------SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPL 375 (508)
Q Consensus 312 lv~e~~~~gsL~~~l~~----------------~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~k 375 (508)
+|||||++|+|.++++. ..++|.+++.|+.||++||+|||++ +|+||||||+|||+++++.+|
T Consensus 120 lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~-~iiHRDLKp~NILl~~~~~~K 198 (329)
T 4aoj_A 120 MVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL-HFVHRDLATRNCLVGQGLVVK 198 (329)
T ss_dssp EEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEEETTTEEE
T ss_pred EEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC-CeecccccHhhEEECCCCcEE
Confidence 99999999999999862 3589999999999999999999999 999999999999999999999
Q ss_pred EeeccCCC-----------------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHh
Q 045127 376 ISRFKIEY-----------------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMH 425 (508)
Q Consensus 376 l~Dfg~~~-----------------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~ 425 (508)
|+|||+++ .++.++|||||||++|||+| |+.||...... .+...+...
T Consensus 199 i~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~--~~~~~i~~g 276 (329)
T 4aoj_A 199 IGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT--EAIDCITQG 276 (329)
T ss_dssp ECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHH--HHHHHHHHT
T ss_pred EcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHH--HHHHHHHcC
Confidence 99999742 35678999999999999999 89999754322 122222211
Q ss_pred ccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhCC
Q 045127 426 YPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSCP 484 (508)
Q Consensus 426 ~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 484 (508)
. ++..+ ......+.+++.+||+.||++||||+||+++|+.+.+..+
T Consensus 277 ~----------~~~~p---~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~pp 322 (329)
T 4aoj_A 277 R----------ELERP---RACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAPP 322 (329)
T ss_dssp C----------CCCCC---TTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHSCC
T ss_pred C----------CCCCc---ccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhCCc
Confidence 1 11111 1224567889999999999999999999999999987643
|
| >4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-49 Score=390.64 Aligned_cols=225 Identities=21% Similarity=0.302 Sum_probs=186.1
Q ss_pred CCCCCceeeecCCeEEEEEEEC------CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEE
Q 045127 239 GFSKKNLVGKNEGAAIYKGILR------DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAI 312 (508)
Q Consensus 239 ~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 312 (508)
+++..++||+|+||+||+|.+. +++.||||+++........++|.+|+.++++++|||||+++|++.+++..++
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l 106 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSM 106 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEE
Confidence 3455688999999999999973 4678999999766555567889999999999999999999999999999999
Q ss_pred EEeecCCCCHHHHhc-----------------cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceE
Q 045127 313 VTEWTNGGNVELWLS-----------------ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPL 375 (508)
Q Consensus 313 v~e~~~~gsL~~~l~-----------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~k 375 (508)
|||||++|+|.+++. ...++|.++.+|+.|||+||+|||++ +||||||||+|||+++++.+|
T Consensus 107 V~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~-~iiHRDLK~~NILl~~~~~~K 185 (308)
T 4gt4_A 107 IFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH-HVVHKDLATRNVLVYDKLNVK 185 (308)
T ss_dssp EEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECGGGCEE
T ss_pred EEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC-CCCCCCccccceEECCCCCEE
Confidence 999999999999995 24589999999999999999999999 999999999999999999999
Q ss_pred EeeccCCC-----------------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHh
Q 045127 376 ISRFKIEY-----------------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMH 425 (508)
Q Consensus 376 l~Dfg~~~-----------------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~ 425 (508)
|+|||+++ .++.++|||||||++|||+| |+.||.+.... .+...+...
T Consensus 186 i~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~--~~~~~i~~~ 263 (308)
T 4gt4_A 186 ISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ--DVVEMIRNR 263 (308)
T ss_dssp ECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHH--HHHHHHHTT
T ss_pred ECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcC
Confidence 99999852 45678999999999999999 89999754321 222222211
Q ss_pred ccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHH
Q 045127 426 YPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRA 479 (508)
Q Consensus 426 ~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i 479 (508)
. .+..+ ..+...+.+++.+||+.||++||||.||++.|+..
T Consensus 264 ~----------~~~~p---~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 264 Q----------VLPCP---DDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp C----------CCCCC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred C----------CCCCc---ccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 1 01111 12345678899999999999999999999999854
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-47 Score=377.93 Aligned_cols=231 Identities=14% Similarity=0.149 Sum_probs=189.6
Q ss_pred hhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEE
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVT 314 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 314 (508)
..+.|+..++||+|+||.||+|++ .+|+.||||+++.... ..+|+.++++++|||||++++++.+++..||||
T Consensus 56 ~~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~------~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivm 129 (336)
T 4g3f_A 56 EVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF------RVEELVACAGLSSPRIVPLYGAVREGPWVNIFM 129 (336)
T ss_dssp TTTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC------CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred chhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh------HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 345678888999999999999998 4689999999975432 247999999999999999999999999999999
Q ss_pred eecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCC-ceEEeeccCC----------
Q 045127 315 EWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNL-EPLISRFKIE---------- 382 (508)
Q Consensus 315 e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~-~~kl~Dfg~~---------- 382 (508)
|||+||+|.++++ .+.+++.++..++.||+.||+|||++ +|+||||||+|||++.++ .+||+|||++
T Consensus 130 Ey~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~-~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~ 208 (336)
T 4g3f_A 130 ELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTR-RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGK 208 (336)
T ss_dssp CCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTT-TEECSCCCGGGEEECTTSCCEEECCCTTCEEC-------
T ss_pred eccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC-CceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCccc
Confidence 9999999999998 67899999999999999999999999 999999999999999887 6999999974
Q ss_pred ----------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccC
Q 045127 383 ----------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMML 440 (508)
Q Consensus 383 ----------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 440 (508)
..++.++|||||||++|||+||+.||........ +.. +....+ ... .+
T Consensus 209 ~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~-~~~-i~~~~~-~~~-----~~-- 278 (336)
T 4g3f_A 209 SLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPL-CLK-IASEPP-PIR-----EI-- 278 (336)
T ss_dssp -----CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCC-HHH-HHHSCC-GGG-----GS--
T ss_pred ceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHH-HHH-HHcCCC-Cch-----hc--
Confidence 2356789999999999999999999976543321 111 111100 000 00
Q ss_pred CcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhCCCC
Q 045127 441 TENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSCPIL 486 (508)
Q Consensus 441 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~ 486 (508)
. ......+.+++.+||+.||++|||+.|+++.|..........
T Consensus 279 ~---~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~l 321 (336)
T 4g3f_A 279 P---PSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGL 321 (336)
T ss_dssp C---TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTSS
T ss_pred C---ccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhhhc
Confidence 0 112455778899999999999999999999998887765443
|
| >4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-48 Score=382.50 Aligned_cols=223 Identities=14% Similarity=0.190 Sum_probs=185.7
Q ss_pred cCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEee
Q 045127 238 NGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEW 316 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 316 (508)
+.|+..++||+|+||.||+|++ .+|+.||||++...... ..+.+.+|+++|++++|||||++++++.+++..||||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~-~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy 152 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ-RRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 152 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCS-SGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchh-HHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeC
Confidence 4688999999999999999998 46999999999643222 345688999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC--------------
Q 045127 317 TNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE-------------- 382 (508)
Q Consensus 317 ~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~-------------- 382 (508)
|++|+|.+++....+++.++..|+.||+.||+|||++ ||+||||||+|||++.++.+||+|||++
T Consensus 153 ~~gg~L~~~l~~~~l~e~~~~~~~~qi~~aL~ylH~~-~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~ 231 (346)
T 4fih_A 153 LEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQ-GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLV 231 (346)
T ss_dssp CTTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCCCC
T ss_pred CCCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC-CcccccCCHHHEEECCCCCEEEecCcCceecCCCCCcccccc
Confidence 9999999999988899999999999999999999999 9999999999999999999999999974
Q ss_pred -------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHHH
Q 045127 383 -------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQAE 449 (508)
Q Consensus 383 -------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 449 (508)
..|+.++|||||||++|||++|+.||...... .....+.... .+.+... .....
T Consensus 232 GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~--~~~~~i~~~~--------~~~~~~~---~~~s~ 298 (346)
T 4fih_A 232 GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL--KAMKMIRDNL--------PPRLKNL---HKVSP 298 (346)
T ss_dssp SCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHHHHHSS--------CCCCSCG---GGSCH
T ss_pred cCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH--HHHHHHHcCC--------CCCCCcc---ccCCH
Confidence 24678899999999999999999999753211 1111121111 1111111 11245
Q ss_pred HHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 450 QGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 450 ~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
.+.+++.+||+.||++|||++|+++.
T Consensus 299 ~~~dli~~~L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 299 SLKGFLDRLLVRDPAQRATAAELLKH 324 (346)
T ss_dssp HHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred HHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 67789999999999999999999874
|
| >4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-47 Score=380.69 Aligned_cols=223 Identities=14% Similarity=0.151 Sum_probs=180.0
Q ss_pred hcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCC-CHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEE
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDV-SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVT 314 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 314 (508)
.++|+..+.||+|+||+||+|+. .+|+.||||+++... .....+.+.+|++++++++|||||++++++.+++..||||
T Consensus 23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVm 102 (350)
T 4b9d_A 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVM 102 (350)
T ss_dssp CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence 46899999999999999999997 569999999997443 4456788999999999999999999999999999999999
Q ss_pred eecCCCCHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC---------
Q 045127 315 EWTNGGNVELWLS---ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE--------- 382 (508)
Q Consensus 315 e~~~~gsL~~~l~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~--------- 382 (508)
|||+||+|.+++. ...+++.++..|+.||+.||+|||++ ||+||||||+|||++.++.+||+|||++
T Consensus 103 Ey~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~-~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~ 181 (350)
T 4b9d_A 103 DYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDR-KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVEL 181 (350)
T ss_dssp ECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT-TCEETTCCGGGEEECTTCCEEECSTTEESCCCHHHHH
T ss_pred eCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeccCCHHHEEECCCCCEEEcccccceeecCCccc
Confidence 9999999999996 34578999999999999999999999 9999999999999999999999999874
Q ss_pred ------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcch
Q 045127 383 ------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENM 444 (508)
Q Consensus 383 ------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 444 (508)
..++.++|||||||++|||+||+.||..... .+.+... .........
T Consensus 182 ~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~-----~~~~~~i--------~~~~~~~~~-- 246 (350)
T 4b9d_A 182 ARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSM-----KNLVLKI--------ISGSFPPVS-- 246 (350)
T ss_dssp HHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH-----HHHHHHH--------HHTCCCCCC--
T ss_pred ccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH-----HHHHHHH--------HcCCCCCCC--
Confidence 3467789999999999999999999975321 1111111 111110000
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 445 FDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 445 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
......+.+++.+||+.||++|||++|+++.
T Consensus 247 ~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 277 (350)
T 4b9d_A 247 LHYSYDLRSLVSQLFKRNPRDRPSVNSILEK 277 (350)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 1123457789999999999999999999863
|
| >3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-47 Score=370.18 Aligned_cols=220 Identities=19% Similarity=0.254 Sum_probs=177.7
Q ss_pred CCCceeeecCCeEEEEEEE-CCCCEEEEEEecCC-CCHHHHHHHHHHHHHHhhcCCCCccceeeEEec----CCeeEEEE
Q 045127 241 SKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGD-VSREIRDEFVEECKLLVQFQHKNLIRVLGWNNS----RRTRAIVT 314 (508)
Q Consensus 241 ~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~----~~~~~lv~ 314 (508)
+..++||+|+||+||+|.+ .++..||+|++... ......+.|.+|++++++++|||||++++++.+ +...|+||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 4557799999999999998 46899999999643 344567789999999999999999999999864 34579999
Q ss_pred eecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCC--ccccCCCCCCEEec-CCCceEEeeccCC--------
Q 045127 315 EWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWP--EVDYDLRTGSVLLT-DNLEPLISRFKIE-------- 382 (508)
Q Consensus 315 e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~--iiH~Dlkp~NIll~-~~~~~kl~Dfg~~-------- 382 (508)
|||++|+|.+++. ...+++..+..|+.||+.||+|||++ + |+||||||+|||++ .++.+||+|||++
T Consensus 109 Ey~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~-~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~~~ 187 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFA 187 (290)
T ss_dssp ECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTTSB
T ss_pred eCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CCCEEecccChhheeEECCCCCEEEEeCcCCEeCCCCcc
Confidence 9999999999998 67899999999999999999999999 8 99999999999998 4899999999974
Q ss_pred ----------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHH
Q 045127 383 ----------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFD 446 (508)
Q Consensus 383 ----------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 446 (508)
..++.++|||||||++|||+||+.||.+..... .+...+.... .....++ .
T Consensus 188 ~~~~GTp~YmAPE~~~~~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~-~~~~~i~~~~---~~~~~~~---------~ 254 (290)
T 3fpq_A 188 KAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAA-QIYRRVTSGV---KPASFDK---------V 254 (290)
T ss_dssp EESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHH-HHHHHHTTTC---CCGGGGG---------C
T ss_pred CCcccCccccCHHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHH-HHHHHHHcCC---CCCCCCc---------c
Confidence 246788999999999999999999997432211 1111111110 0001111 1
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 447 QAEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 447 ~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
...++.+++.+||+.||++|||++|+++
T Consensus 255 ~~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 255 AIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp CCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 1235678899999999999999999986
|
| >4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-47 Score=378.97 Aligned_cols=238 Identities=15% Similarity=0.238 Sum_probs=194.5
Q ss_pred HHHHhhcCCCCCceeeecCCeEEEEEEECC------CCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCC-CCccceeeEE
Q 045127 232 MLKAATNGFSKKNLVGKNEGAAIYKGILRD------GTRVKIEIYKGDVSREIRDEFVEECKLLVQFQH-KNLIRVLGWN 304 (508)
Q Consensus 232 ~l~~~~~~~~~~~~lg~G~~g~V~~~~~~~------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~~~~~~ 304 (508)
+.+...++|+..+.||+|+||.||+|.+.. ++.||||.++........+.|.+|+++|++++| ||||+++|+|
T Consensus 58 ~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~ 137 (353)
T 4ase_A 58 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGAC 137 (353)
T ss_dssp HHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred ccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEE
Confidence 333445788999999999999999998632 357999999877766677889999999999965 8999999998
Q ss_pred ecC-CeeEEEEeecCCCCHHHHhcc-----------------CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCE
Q 045127 305 NSR-RTRAIVTEWTNGGNVELWLSE-----------------SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSV 366 (508)
Q Consensus 305 ~~~-~~~~lv~e~~~~gsL~~~l~~-----------------~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NI 366 (508)
... ...++|||||++|+|.++++. ..+++.++..|+.|||+||+|||++ +||||||||+||
T Consensus 138 ~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~-~iiHRDLK~~NI 216 (353)
T 4ase_A 138 TKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR-KCIHRDLAARNI 216 (353)
T ss_dssp CCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGE
T ss_pred EecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC-CeecCccCccce
Confidence 764 568999999999999999962 3479999999999999999999999 999999999999
Q ss_pred EecCCCceEEeeccCCC-----------------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcc
Q 045127 367 LLTDNLEPLISRFKIEY-----------------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEA 416 (508)
Q Consensus 367 ll~~~~~~kl~Dfg~~~-----------------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~ 416 (508)
|+++++.+||+|||+++ .++.++|||||||++|||+| |+.||.+.....
T Consensus 217 Ll~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~- 295 (353)
T 4ase_A 217 LLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE- 295 (353)
T ss_dssp EECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH-
T ss_pred eeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHH-
Confidence 99999999999999853 35678999999999999998 999998654322
Q ss_pred cHHHHHHHhccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhCC
Q 045127 417 GFIEYIRMHYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSCP 484 (508)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 484 (508)
.+...+..... +..+. ....++.+++.+||+.||++|||++||++.|+++.+...
T Consensus 296 ~~~~~i~~g~~----------~~~p~---~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~~~ 350 (353)
T 4ase_A 296 EFCRRLKEGTR----------MRAPD---YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 350 (353)
T ss_dssp HHHHHHHHTCC----------CCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHcCCC----------CCCCc---cCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHHhh
Confidence 12222222111 11111 124567788999999999999999999999999987643
|
| >3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-47 Score=373.20 Aligned_cols=238 Identities=13% Similarity=0.144 Sum_probs=184.7
Q ss_pred cCCCCCceeeecCCeEEEEEEECCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCC----eeEEE
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRR----TRAIV 313 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~----~~~lv 313 (508)
++|...+.||+|+||+||+|++ +|+.||||+++... .....+..|+..+.+++|||||++++++.+++ ..++|
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~--~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV 79 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE--ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV 79 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGG--HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccc--hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEE
Confidence 4567779999999999999998 58999999996432 12233445666778899999999999998653 57999
Q ss_pred EeecCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCC-------CccccCCCCCCEEecCCCceEEeeccCCC---
Q 045127 314 TEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQW-------PEVDYDLRTGSVLLTDNLEPLISRFKIEY--- 383 (508)
Q Consensus 314 ~e~~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~-------~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~--- 383 (508)
||||++|+|.++++...++|+.+.+++.|++.||+|||+++ +|+||||||+|||++.++++||+|||+++
T Consensus 80 ~Ey~~~gsL~~~l~~~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~ 159 (303)
T 3hmm_A 80 SDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 159 (303)
T ss_dssp EECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEE
T ss_pred ecCCCCCcHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCcccc
Confidence 99999999999999889999999999999999999999752 89999999999999999999999999742
Q ss_pred ----------------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCc----------ccHH
Q 045127 384 ----------------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGE----------AGFI 419 (508)
Q Consensus 384 ----------------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~----------~~~~ 419 (508)
.++.++|||||||++|||+||+.||....... ....
T Consensus 160 ~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~ 239 (303)
T 3hmm_A 160 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVE 239 (303)
T ss_dssp TTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHH
T ss_pred CCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHH
Confidence 12347899999999999999988765432211 1111
Q ss_pred HHHHHhccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhh
Q 045127 420 EYIRMHYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKS 482 (508)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 482 (508)
........ ...++.+.......+....+.+++.+||+.||++||||.||++.|+++.+.
T Consensus 240 ~~~~~~~~----~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~ 298 (303)
T 3hmm_A 240 EMRKVVCE----QKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp HHHHHHTT----SCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHHHHHhc----ccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHH
Confidence 11111111 111222222222234567888999999999999999999999999998764
|
| >3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-46 Score=360.19 Aligned_cols=221 Identities=16% Similarity=0.220 Sum_probs=177.5
Q ss_pred hcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCC--HHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEE
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVS--REIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIV 313 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 313 (508)
.++|+..+.||+|+||+||+|+. .+|+.||||+++.... ....+.+.+|++++++++||||+++++++.+++..|+|
T Consensus 12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv 91 (275)
T 3hyh_A 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred eeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence 37899999999999999999997 5699999999965432 23356799999999999999999999999999999999
Q ss_pred EeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC---------
Q 045127 314 TEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY--------- 383 (508)
Q Consensus 314 ~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~--------- 383 (508)
|||+ +|+|.+++. ...+++.++..++.||+.||+|||++ ||+||||||+|||++.++.+||+|||++.
T Consensus 92 mEy~-~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~-~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~~ 169 (275)
T 3hyh_A 92 IEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH-KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLK 169 (275)
T ss_dssp EECC-CEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCTTTEEECTTCCEEECCSSCC----------
T ss_pred EeCC-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC-CcccccCChHHeEECCCCCEEEeecCCCeecCCCCccC
Confidence 9999 679998887 67899999999999999999999999 99999999999999999999999999852
Q ss_pred -----------------C-CCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchH
Q 045127 384 -----------------Q-HRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMF 445 (508)
Q Consensus 384 -----------------~-~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 445 (508)
. ++.++||||+||++|||+||+.||..... ..+...+. ......+.
T Consensus 170 ~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~--~~~~~~i~-----------~~~~~~p~--- 233 (275)
T 3hyh_A 170 TSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI--PVLFKNIS-----------NGVYTLPK--- 233 (275)
T ss_dssp -----CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHH-----------HTCCCCCT---
T ss_pred CeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCH--HHHHHHHH-----------cCCCCCCC---
Confidence 2 24689999999999999999999974321 11111111 11111111
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 446 DQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 446 ~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
.....+.+++.+||+.||++|||++|+++.
T Consensus 234 ~~s~~~~~li~~~L~~dP~~R~s~~eil~h 263 (275)
T 3hyh_A 234 FLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp TSCHHHHHHHHHHSCSSGGGSCCHHHHHHC
T ss_pred CCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 113456788999999999999999999873
|
| >4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-47 Score=383.49 Aligned_cols=223 Identities=14% Similarity=0.195 Sum_probs=186.3
Q ss_pred cCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEee
Q 045127 238 NGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEW 316 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 316 (508)
+.|+..++||+|+||.||+|++ .+|+.||||++...... ..+.+.+|+.+|++++|||||++++++.+++..||||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~-~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy 229 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ-RRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 229 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCS-SGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchh-HHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeC
Confidence 5699999999999999999998 46999999999644322 356688999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC--------------
Q 045127 317 TNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE-------------- 382 (508)
Q Consensus 317 ~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~-------------- 382 (508)
|+||+|.+++....+++.++..|+.||+.||+|||++ |||||||||+|||++.++.+||+|||++
T Consensus 230 ~~gG~L~~~i~~~~l~e~~~~~~~~qil~aL~ylH~~-~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~ 308 (423)
T 4fie_A 230 LEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQ-GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLV 308 (423)
T ss_dssp CTTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCBCCCE
T ss_pred CCCCcHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHC-CeecccCCHHHEEEcCCCCEEEecCccceECCCCCccccccc
Confidence 9999999999988899999999999999999999999 9999999999999999999999999974
Q ss_pred -------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHHH
Q 045127 383 -------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQAE 449 (508)
Q Consensus 383 -------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 449 (508)
..|+.++|||||||++|||++|+.||.+... ......+.... .+.+.... ....
T Consensus 309 GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~--~~~~~~i~~~~--------~~~~~~~~---~~s~ 375 (423)
T 4fie_A 309 GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP--LKAMKMIRDNL--------PPRLKNLH---KVSP 375 (423)
T ss_dssp ECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--HHHHHHHHHSC--------CCCCSCTT---SSCH
T ss_pred cCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH--HHHHHHHHcCC--------CCCCcccc---cCCH
Confidence 3467889999999999999999999975321 11111121111 11111111 1234
Q ss_pred HHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 450 QGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 450 ~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
.+.+++.+||+.||++|||++|+++.
T Consensus 376 ~~~dli~~~L~~dP~~R~ta~ell~H 401 (423)
T 4fie_A 376 SLKGFLDRLLVRDPAQRATAAELLKH 401 (423)
T ss_dssp HHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred HHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 67788999999999999999999874
|
| >4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-47 Score=369.44 Aligned_cols=221 Identities=11% Similarity=0.123 Sum_probs=183.0
Q ss_pred hcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCC--CHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEE
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDV--SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIV 313 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 313 (508)
.++|+..+.||+|+||+||+|+. .+|+.||||++.... .....+.+.+|++++++++|||||++++++.+++..|+|
T Consensus 31 ~~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yiv 110 (311)
T 4aw0_A 31 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG 110 (311)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 36799999999999999999997 579999999996432 112357799999999999999999999999999999999
Q ss_pred EeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC---------
Q 045127 314 TEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY--------- 383 (508)
Q Consensus 314 ~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~--------- 383 (508)
||||+||+|.+++. .+.+++.++..++.||+.||+|||++ ||+||||||+|||++.++.+||+|||++.
T Consensus 111 mEy~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~-~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~~ 189 (311)
T 4aw0_A 111 LSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK-GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQA 189 (311)
T ss_dssp ECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTCC
T ss_pred EecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC-CCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCcc
Confidence 99999999999998 67899999999999999999999999 99999999999999999999999999852
Q ss_pred --------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcc
Q 045127 384 --------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTEN 443 (508)
Q Consensus 384 --------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 443 (508)
.++.++||||+||++|||+||+.||...... .+...+ ....+....
T Consensus 190 ~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~--~~~~~i-----------~~~~~~~p~- 255 (311)
T 4aw0_A 190 RANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEG--LIFAKI-----------IKLEYDFPE- 255 (311)
T ss_dssp CBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHH-----------HHTCCCCCT-
T ss_pred cccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHH-----------HcCCCCCCc-
Confidence 3456789999999999999999999743211 111111 111111111
Q ss_pred hHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 444 MFDQAEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 444 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
....++.+++.+||+.||++|||++|++.
T Consensus 256 --~~s~~~~dli~~lL~~dp~~R~t~~e~~~ 284 (311)
T 4aw0_A 256 --KFFPKARDLVEKLLVLDATKRLGCEEMEG 284 (311)
T ss_dssp --TCCHHHHHHHHHHSCSSGGGSTTSGGGTC
T ss_pred --ccCHHHHHHHHHHccCCHhHCcChHHHcC
Confidence 11345678999999999999999998743
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-45 Score=356.97 Aligned_cols=220 Identities=13% Similarity=0.202 Sum_probs=173.3
Q ss_pred hcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCC-------
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRR------- 308 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------- 308 (508)
.++|+..+.||+|+||.||+|++ .+|+.||||+++........+.+.+|++++++++|||||++++++.+.+
T Consensus 4 l~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~ 83 (299)
T 4g31_A 4 LTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQP 83 (299)
T ss_dssp HHHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC-------
T ss_pred chhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccc
Confidence 35688999999999999999997 4689999999976656666788999999999999999999999987543
Q ss_pred -----eeEEEEeecCCCCHHHHhccC----CCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeec
Q 045127 309 -----TRAIVTEWTNGGNVELWLSES----APSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRF 379 (508)
Q Consensus 309 -----~~~lv~e~~~~gsL~~~l~~~----~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Df 379 (508)
..|+|||||++|+|.+++... ..++..+..|+.||++||+|||++ ||+||||||+|||++.++.+||+||
T Consensus 84 ~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~-~IiHRDlKp~NILl~~~~~vKl~DF 162 (299)
T 4g31_A 84 SSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK-GLMHRDLKPSNIFFTMDDVVKVGDF 162 (299)
T ss_dssp ---CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTCCEEECCC
T ss_pred cCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC-cCccccCcHHHeEECCCCcEEEccC
Confidence 368999999999999999832 345667889999999999999999 9999999999999999999999999
Q ss_pred cCCC---------------------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHH
Q 045127 380 KIEY---------------------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIE 420 (508)
Q Consensus 380 g~~~---------------------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~ 420 (508)
|+++ .++.++|||||||++|||++ ||...... ..
T Consensus 163 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~----~~ 235 (299)
T 4g31_A 163 GLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMER----VR 235 (299)
T ss_dssp CCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHH----HH
T ss_pred ccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHH----HH
Confidence 9742 35678999999999999996 77532110 01
Q ss_pred HHHHhccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 421 YIRMHYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 421 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
.+.. +.+... +...........+++.+||+.||++|||+.|+++
T Consensus 236 ~~~~--------~~~~~~--p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 236 TLTD--------VRNLKF--PPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp HHHH--------HHTTCC--CHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHH--------HhcCCC--CCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 1110 001000 1111122344567899999999999999999987
|
| >3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-46 Score=363.02 Aligned_cols=220 Identities=15% Similarity=0.169 Sum_probs=175.5
Q ss_pred cCCCCCceeeecCCeEEEEEEEC----CCCEEEEEEecCCCC-HHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEE
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILR----DGTRVKIEIYKGDVS-REIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAI 312 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 312 (508)
++|+..+.||+|+||+||+|+.. .++.||||+++.... .....++.+|++++++++|||||++++++.+++..|+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 57999999999999999999862 468999999964321 1234468899999999999999999999999999999
Q ss_pred EEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC---------
Q 045127 313 VTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE--------- 382 (508)
Q Consensus 313 v~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~--------- 382 (508)
|||||+||+|.+++. ...+++.++..++.||+.||+|||++ ||+||||||+|||++.++.+||+|||++
T Consensus 104 vmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~-~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~ 182 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSL-GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKK 182 (304)
T ss_dssp EECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSSCCGGGEEECTTSCEEEESSEEEEC-----CC
T ss_pred EEEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CCcCCCCCHHHeEEcCCCCEEecccccceeccCCCcc
Confidence 999999999999998 67899999999999999999999999 9999999999999999999999999874
Q ss_pred ------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcch
Q 045127 383 ------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENM 444 (508)
Q Consensus 383 ------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 444 (508)
..++.++||||+||++|||+||+.||...... .+...+. ...+..+.
T Consensus 183 ~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~--~~~~~i~-----------~~~~~~p~-- 247 (304)
T 3ubd_A 183 AYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRK--ETMTMIL-----------KAKLGMPQ-- 247 (304)
T ss_dssp CCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHH-----------HCCCCCCT--
T ss_pred ccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHH--HHHHHHH-----------cCCCCCCC--
Confidence 34678899999999999999999999753221 1111111 11111111
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCC-----HHHHHH
Q 045127 445 FDQAEQGLGLGLMCTDQPTGKLPS-----LVQIYN 474 (508)
Q Consensus 445 ~~~~~~l~~l~~~Cl~~dP~~RPs-----~~evl~ 474 (508)
.....+.+++.+||+.||++||| ++|+++
T Consensus 248 -~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~ 281 (304)
T 3ubd_A 248 -FLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKR 281 (304)
T ss_dssp -TSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred -cCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence 12345678999999999999998 467765
|
| >4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-42 Score=350.87 Aligned_cols=235 Identities=13% Similarity=0.141 Sum_probs=181.8
Q ss_pred cCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCC-CHHHHHHHHHHHHHHhhcCCCCccceeeEEec------CCe
Q 045127 238 NGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDV-SREIRDEFVEECKLLVQFQHKNLIRVLGWNNS------RRT 309 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~------~~~ 309 (508)
++|+..+.||+|+||.||+|+. .+|+.||||+++... .....+.+.+|+++|++++|||||++++++.. ...
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 5799999999999999999997 579999999996443 33456788999999999999999999998764 357
Q ss_pred eEEEEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-----
Q 045127 310 RAIVTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY----- 383 (508)
Q Consensus 310 ~~lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~----- 383 (508)
.|+|||||+ |+|.+++. ...+++.++..++.||+.||+|||++ ||+||||||+|||++.++.+||+|||+++
T Consensus 134 ~~ivmE~~~-g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~-~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~~ 211 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSA-QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTS 211 (398)
T ss_dssp EEEEEECCS-EEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTCCEEECCCTTCBCC---
T ss_pred EEEEEeCCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-cCcCCCcCccccccCCCCCEEEeecceeeecccC
Confidence 899999996 67999887 67899999999999999999999999 99999999999999999999999999752
Q ss_pred ---------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccc--h-----
Q 045127 384 ---------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPE--N----- 429 (508)
Q Consensus 384 ---------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~--~----- 429 (508)
.++.++||||+||++|||++|+.||......+ .+.......... .
T Consensus 212 ~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~-~l~~I~~~~g~p~~~~~~~~ 290 (398)
T 4b99_A 212 PAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVH-QLQLIMMVLGTPSPAVIQAV 290 (398)
T ss_dssp ----CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHH-HHHHHHHHHCCCCGGGTC--
T ss_pred ccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHH-HHHHHHHhcCCCChHHhhhh
Confidence 24567899999999999999999997543211 111111111100 0
Q ss_pred ----hhhhhhhcccCCcchH-----HHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 430 ----LQLVVDERMMLTENMF-----DQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 430 ----~~~~~~~~l~~~~~~~-----~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
....+........... .....+.+++.+||..||++|||++|+++.
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 291 GAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp ---CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred hhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 0000000000000000 113467789999999999999999999874
|
| >4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-42 Score=349.49 Aligned_cols=176 Identities=11% Similarity=0.167 Sum_probs=155.1
Q ss_pred HHHHHhhcCCCCCceeeecCCeEEEEEEEC----CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhc-CCCCccceeeEEe
Q 045127 231 WMLKAATNGFSKKNLVGKNEGAAIYKGILR----DGTRVKIEIYKGDVSREIRDEFVEECKLLVQF-QHKNLIRVLGWNN 305 (508)
Q Consensus 231 ~~l~~~~~~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~ 305 (508)
+.+.+..+.|+..+.||+|+||+||+|+.+ .++.||+|.+..... ..++.+|+++++.+ +||||+++++++.
T Consensus 14 ~~~p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~---~~~~~~E~~~l~~~~~h~nIv~l~~~~~ 90 (361)
T 4f9c_A 14 EAVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSH---PIRIAAELQCLTVAGGQDNVMGVKYCFR 90 (361)
T ss_dssp HHSGGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSC---HHHHHHHHHHHHHTCSBTTBCCCSEEEE
T ss_pred HhcCCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccC---HHHHHHHHHHHHHhcCCCCCceEEEEEE
Confidence 344556788999999999999999999863 467899999865433 35678999999998 6999999999999
Q ss_pred cCCeeEEEEeecCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCC-CceEEeeccCCC-
Q 045127 306 SRRTRAIVTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDN-LEPLISRFKIEY- 383 (508)
Q Consensus 306 ~~~~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~-~~~kl~Dfg~~~- 383 (508)
+.+..|+||||+++|+|.+++. .+++.++..++.|++.||+|||++ ||+||||||+|||++.+ +.+||+|||+++
T Consensus 91 ~~~~~~lvmE~~~g~~L~~~~~--~l~~~~~~~~~~qll~al~ylH~~-gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~ 167 (361)
T 4f9c_A 91 KNDHVVIAMPYLEHESFLDILN--SLSFQEVREYMLNLFKALKRIHQF-GIVHRDVKPSNFLYNRRLKKYALVDFGLAQG 167 (361)
T ss_dssp ETTEEEEEEECCCCCCHHHHHT--TCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred ECCEEEEEEeCCCcccHHHHHc--CCCHHHHHHHHHHHHHHHHHHHHC-CeEeCcCCHHHeEEeCCCCeEEECcCCCCcc
Confidence 9999999999999999999984 689999999999999999999999 99999999999999876 899999999752
Q ss_pred -------------------------------------------------------CCCCcchhhHHHHHHHHHHhCCCCC
Q 045127 384 -------------------------------------------------------QHRSTKYVYKFGLFLLEMITNRRPL 408 (508)
Q Consensus 384 -------------------------------------------------------~~~~~~Dv~SlGvil~elltg~~P~ 408 (508)
.++.++||||+||++|||++|+.||
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf 247 (361)
T 4f9c_A 168 THDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPF 247 (361)
T ss_dssp CTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSS
T ss_pred cCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCC
Confidence 2456789999999999999999999
Q ss_pred cccc
Q 045127 409 EEFE 412 (508)
Q Consensus 409 ~~~~ 412 (508)
....
T Consensus 248 ~~~~ 251 (361)
T 4f9c_A 248 YKAS 251 (361)
T ss_dssp SCCS
T ss_pred CCCC
Confidence 6543
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-42 Score=339.54 Aligned_cols=254 Identities=23% Similarity=0.384 Sum_probs=209.3
Q ss_pred CCCHHHHHHhhcCCCCCceeeecCCeEEEEEEECCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEec
Q 045127 227 KFTTWMLKAATNGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNS 306 (508)
Q Consensus 227 ~~~~~~l~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 306 (508)
.+++.++...+++|+..+.||+|+||.||+|.+.+++.||||++..... ...+.+.+|+.++++++||||+++++++..
T Consensus 28 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 106 (321)
T 2qkw_B 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESS-QGIEEFETEIETLSFCRHPHLVSLIGFCDE 106 (321)
T ss_dssp --CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCS-SHHHHHHHHHHGGGSCCCTTBCCEEEECCC
T ss_pred eecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccCh-HHHHHHHHHHHHHHhCCCCCEeeEEEEEcC
Confidence 4555667788999999999999999999999988899999999865433 356789999999999999999999999999
Q ss_pred CCeeEEEEeecCCCCHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccC
Q 045127 307 RRTRAIVTEWTNGGNVELWLSE-----SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKI 381 (508)
Q Consensus 307 ~~~~~lv~e~~~~gsL~~~l~~-----~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~ 381 (508)
.+..++||||+++|+|.+++.. ..+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||.
T Consensus 107 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~-~ivH~dlkp~Nil~~~~~~~kl~Dfg~ 185 (321)
T 2qkw_B 107 RNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR-AIIHRDVKSINILLDENFVPKITDFGI 185 (321)
T ss_dssp TTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCSTTEEECTTCCEEECCCTT
T ss_pred CCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC-CeecCCCCHHHEEECCCCCEEEeeccc
Confidence 9999999999999999999973 3589999999999999999999999 999999999999999999999999987
Q ss_pred CC-----------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccC-cccHHHHHHHhcc-chh
Q 045127 382 EY-----------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERG-EAGFIEYIRMHYP-ENL 430 (508)
Q Consensus 382 ~~-----------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~-~~~~~~~~~~~~~-~~~ 430 (508)
+. .++.++||||||+++|||++|+.||...... ......|...... ..+
T Consensus 186 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (321)
T 2qkw_B 186 SKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQL 265 (321)
T ss_dssp CEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCC
T ss_pred ccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccH
Confidence 42 2456899999999999999999999765432 2334444332221 123
Q ss_pred hhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhC
Q 045127 431 QLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSC 483 (508)
Q Consensus 431 ~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 483 (508)
...+++.+... ........+.+++.+||+.||++|||+.|+++.|+.+.+..
T Consensus 266 ~~~~~~~~~~~-~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~~ 317 (321)
T 2qkw_B 266 EQIVDPNLADK-IRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQ 317 (321)
T ss_dssp CSSSSSSCTTC-SCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred HHhcChhhccc-cCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhcc
Confidence 33444433221 12456788999999999999999999999999999987643
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-42 Score=339.91 Aligned_cols=256 Identities=23% Similarity=0.456 Sum_probs=212.7
Q ss_pred ccCCCCCHHHHHHhhcCCCCCceeeecCCeEEEEEEECCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceee
Q 045127 223 RRNHKFTTWMLKAATNGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLG 302 (508)
Q Consensus 223 ~~~~~~~~~~l~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~ 302 (508)
.....+++.++....++|+..+.||+|+||.||+|...+++.||||++...........+.+|++++++++||||+++++
T Consensus 15 ~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~ 94 (326)
T 3uim_A 15 GQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRG 94 (326)
T ss_dssp CCCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCE
T ss_pred CccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEE
Confidence 34567889999999999999999999999999999988899999999976544434447899999999999999999999
Q ss_pred EEecCCeeEEEEeecCCCCHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHhhCC--CccccCCCCCCEEecCCCceE
Q 045127 303 WNNSRRTRAIVTEWTNGGNVELWLSE-----SAPSWKHRLKVLIGVVEAMCYLQEQW--PEVDYDLRTGSVLLTDNLEPL 375 (508)
Q Consensus 303 ~~~~~~~~~lv~e~~~~gsL~~~l~~-----~~l~~~~~~~i~~~i~~~L~~LH~~~--~iiH~Dlkp~NIll~~~~~~k 375 (508)
++..+...++||||+++|+|.+++.. ..+++..+..++.|++.||+|||+++ ||+||||||+||+++.++.+|
T Consensus 95 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~k 174 (326)
T 3uim_A 95 FCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV 174 (326)
T ss_dssp EECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEE
T ss_pred EEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEE
Confidence 99999999999999999999999972 34899999999999999999999986 899999999999999999999
Q ss_pred EeeccCCC----------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccc---cCcccHHHHHHH
Q 045127 376 ISRFKIEY----------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFE---RGEAGFIEYIRM 424 (508)
Q Consensus 376 l~Dfg~~~----------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~---~~~~~~~~~~~~ 424 (508)
|+|||.+. .++.++||||||+++|||++|+.||+... ........|+..
T Consensus 175 l~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 254 (326)
T 3uim_A 175 VGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKG 254 (326)
T ss_dssp ECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTT
T ss_pred eccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHH
Confidence 99999752 23457899999999999999999997432 233455566655
Q ss_pred hccch-hhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHH
Q 045127 425 HYPEN-LQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRA 479 (508)
Q Consensus 425 ~~~~~-~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i 479 (508)
..... .....+..+.... .......+.+++.+||+.||.+|||+.||+++|++.
T Consensus 255 ~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~ 309 (326)
T 3uim_A 255 LLKEKKLEALVDVDLQGNY-KDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309 (326)
T ss_dssp TTSSCCSTTSSCTTCTTSC-CHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTS
T ss_pred HhhchhhhhhcChhhcccc-CHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCc
Confidence 44443 4444444443222 246678899999999999999999999999999864
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-40 Score=324.12 Aligned_cols=253 Identities=23% Similarity=0.424 Sum_probs=209.0
Q ss_pred cCCCCCHHHHHHhhcCCCCC------ceeeecCCeEEEEEEECCCCEEEEEEecCCC---CHHHHHHHHHHHHHHhhcCC
Q 045127 224 RNHKFTTWMLKAATNGFSKK------NLVGKNEGAAIYKGILRDGTRVKIEIYKGDV---SREIRDEFVEECKLLVQFQH 294 (508)
Q Consensus 224 ~~~~~~~~~l~~~~~~~~~~------~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h 294 (508)
..+.|++.++..++++|... +.||+|+||.||+|.. +++.||+|++.... .....+.+.+|+.++++++|
T Consensus 11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h 89 (307)
T 2nru_A 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH 89 (307)
T ss_dssp CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCC
T ss_pred CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCC
Confidence 34678999999999999888 9999999999999987 58899999986432 23356789999999999999
Q ss_pred CCccceeeEEecCCeeEEEEeecCCCCHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecC
Q 045127 295 KNLIRVLGWNNSRRTRAIVTEWTNGGNVELWLS----ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTD 370 (508)
Q Consensus 295 ~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~----~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~ 370 (508)
|||+++++++...+..++||||+++|+|.+++. ...+++..+..++.|++.||+|||++ |++||||||+||+++.
T Consensus 90 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~-~i~H~dlkp~Nili~~ 168 (307)
T 2nru_A 90 ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN-HHIHRDIKSANILLDE 168 (307)
T ss_dssp TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEECT
T ss_pred CCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC-CeecCCCCHHHEEEcC
Confidence 999999999999999999999999999999986 35689999999999999999999999 9999999999999999
Q ss_pred CCceEEeeccCCC----------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHH
Q 045127 371 NLEPLISRFKIEY----------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYI 422 (508)
Q Consensus 371 ~~~~kl~Dfg~~~----------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~ 422 (508)
++.+||+|||.+. .++.++||||||+++|+|++|+.||....... .+..+.
T Consensus 169 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-~~~~~~ 247 (307)
T 2nru_A 169 AFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQ-LLLDIK 247 (307)
T ss_dssp TCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTTEECTHHHHHHHHHHHHHHHHCCCSBCTTBSSS-BTTHHH
T ss_pred CCcEEEeecccccccccccccccccccCCCcCcCChHHhcCCCCccchhHHHHHHHHHHHHCCCCcccCcchH-HHHHHH
Confidence 9999999998642 23568999999999999999999998654322 111221
Q ss_pred HHh--ccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHh
Q 045127 423 RMH--YPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYK 481 (508)
Q Consensus 423 ~~~--~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~ 481 (508)
... ....+.+.+++.+.. ........+.+++.+||+.||.+|||+.++++.|+++..
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 248 EEIEDEEKTIEDYIDKKMND--ADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp HHHHTTSCCHHHHSCSSCSC--CCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred HHhhhhhhhhhhhccccccc--cchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 111 112244445544422 223557788899999999999999999999999998864
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-40 Score=331.46 Aligned_cols=234 Identities=24% Similarity=0.376 Sum_probs=193.5
Q ss_pred hcCCCCCceeeecCCeEEEEEEEC----CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEE
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGILR----DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAI 312 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 312 (508)
.++|+..+.||+|+||.||+|.+. .+..||||+++........+.+.+|+.++++++||||+++++++.+++..++
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 127 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI 127 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEE
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEE
Confidence 356788899999999999999973 3456999999876666677889999999999999999999999999999999
Q ss_pred EEeecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-------
Q 045127 313 VTEWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------- 383 (508)
Q Consensus 313 v~e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------- 383 (508)
||||+++|+|.+++. ...+++.++..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||++.
T Consensus 128 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~-~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 206 (325)
T 3kul_A 128 VTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDL-GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPD 206 (325)
T ss_dssp EEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTCCEEECCCSSCEECC----
T ss_pred EeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC-CeeCCCCCcceEEECCCCCEEECCCCcccccccCcc
Confidence 999999999999996 45799999999999999999999999 99999999999999999999999998752
Q ss_pred -----------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhccc
Q 045127 384 -----------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMM 439 (508)
Q Consensus 384 -----------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 439 (508)
.++.++||||||+++|||++ |+.||....... +...+..... ..
T Consensus 207 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~--~~~~~~~~~~----------~~ 274 (325)
T 3kul_A 207 AAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRD--VISSVEEGYR----------LP 274 (325)
T ss_dssp CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHH--HHHHHHTTCC----------CC
T ss_pred ceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHH--HHHHHHcCCC----------CC
Confidence 23457899999999999999 999997543211 1111111100 00
Q ss_pred CCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhCCCC
Q 045127 440 LTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSCPIL 486 (508)
Q Consensus 440 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~ 486 (508)
.. ......+.+++.+||+.||++|||+.||++.|+.+.+.....
T Consensus 275 ~~---~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~~~ 318 (325)
T 3kul_A 275 AP---MGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPESL 318 (325)
T ss_dssp CC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC--
T ss_pred CC---CCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCcccc
Confidence 00 122456778999999999999999999999999998765543
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-40 Score=326.74 Aligned_cols=233 Identities=18% Similarity=0.292 Sum_probs=192.9
Q ss_pred hcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEe
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTE 315 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 315 (508)
.++|...+.||+|+||.||+|.+ .+++.||+|.+.. ......+.+.+|++++++++||||+++++++.++...++|||
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 87 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIR-FDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITE 87 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESC-CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEecc-CCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEE
Confidence 46788899999999999999998 4689999999854 344567889999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC----------
Q 045127 316 WTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY---------- 383 (508)
Q Consensus 316 ~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~---------- 383 (508)
|+++|+|.+++. ...+++.++..++.|+++||+|||++ ||+||||||+||+++.++.+||+|||.+.
T Consensus 88 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 166 (310)
T 3s95_A 88 YIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSM-NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPE 166 (310)
T ss_dssp CCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSTTSEEECTTSCEEECCCTTCEECC-------
T ss_pred ecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC-CccCCCCCcCeEEECCCCCEEEeecccceeccccccccc
Confidence 999999999998 47799999999999999999999999 99999999999999999999999998752
Q ss_pred -------------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhh
Q 045127 384 -------------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQL 432 (508)
Q Consensus 384 -------------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (508)
.++.++||||||+++|||++|..|+........... .....
T Consensus 167 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~--------~~~~~ 238 (310)
T 3s95_A 167 GLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFG--------LNVRG 238 (310)
T ss_dssp -------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSS--------BCHHH
T ss_pred ccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHh--------hhhhc
Confidence 246789999999999999999999875432221100 00111
Q ss_pred hhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhCC
Q 045127 433 VVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSCP 484 (508)
Q Consensus 433 ~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 484 (508)
..+..... .....+.+++.+||+.||++|||+.|+++.|+.+.....
T Consensus 239 ~~~~~~~~-----~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~~ 285 (310)
T 3s95_A 239 FLDRYCPP-----NCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLA 285 (310)
T ss_dssp HHHHTCCT-----TCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred cccccCCC-----CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhcc
Confidence 11111100 112356788999999999999999999999999977643
|
| >3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-40 Score=352.47 Aligned_cols=225 Identities=13% Similarity=0.119 Sum_probs=180.0
Q ss_pred hcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCC-----CHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCee
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDV-----SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTR 310 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 310 (508)
.++|+..+.||+|+||.||+|+. .+|+.||||++.... ..........++.+++.++|||||++++++.+.+..
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 46799999999999999999997 469999999995321 111222334456777888999999999999999999
Q ss_pred EEEEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC-------
Q 045127 311 AIVTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE------- 382 (508)
Q Consensus 311 ~lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~------- 382 (508)
|+|||||+||+|.+++. .+.+++..+..++.||+.||+|||++ |||||||||+|||++.+|.+||+|||++
T Consensus 268 ylVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~-gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~~ 346 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNR-FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK 346 (689)
T ss_dssp EEEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTT-TEECCCCSGGGEEECTTSCEEECCCTTCEECSSCC
T ss_pred EEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCchHHeEEeCCCCEEecccceeeecCCCC
Confidence 99999999999999998 67899999999999999999999999 9999999999999999999999999974
Q ss_pred -------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcc
Q 045127 383 -------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTEN 443 (508)
Q Consensus 383 -------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 443 (508)
..++.++||||+||++|||++|+.||....... ........ ....+....
T Consensus 347 ~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~--~~~i~~~i--------~~~~~~~p~- 415 (689)
T 3v5w_A 347 PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD--KHEIDRMT--------LTMAVELPD- 415 (689)
T ss_dssp CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCC--HHHHHHHH--------HHCCCCCCT-
T ss_pred CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH--HHHHHHhh--------cCCCCCCCc-
Confidence 246788999999999999999999997543222 11111111 111111111
Q ss_pred hHHHHHHHHHHHHhcCCCCCCCCCC-----HHHHHHH
Q 045127 444 MFDQAEQGLGLGLMCTDQPTGKLPS-----LVQIYNM 475 (508)
Q Consensus 444 ~~~~~~~l~~l~~~Cl~~dP~~RPs-----~~evl~~ 475 (508)
.....+.+++.+||+.||++|++ ++||+++
T Consensus 416 --~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~H 450 (689)
T 3v5w_A 416 --SFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKES 450 (689)
T ss_dssp --TSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTS
T ss_pred --cCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcC
Confidence 11345678899999999999998 7888764
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-40 Score=327.99 Aligned_cols=238 Identities=19% Similarity=0.299 Sum_probs=191.4
Q ss_pred HHHHHhhcCCCCCceeeecCCeEEEEEEECCCCEEEEEEecCCC-CHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCe
Q 045127 231 WMLKAATNGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDV-SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRT 309 (508)
Q Consensus 231 ~~l~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 309 (508)
.++....++|+..+.||+|+||.||+|.+ +|+.||||++.... .....+.+.+|++++++++||||+++++++.....
T Consensus 30 ~~~~i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 108 (309)
T 3p86_A 30 DDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPN 108 (309)
T ss_dssp --CBCCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTC
T ss_pred ccccCChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCc
Confidence 34445567899999999999999999988 58899999996543 34456789999999999999999999999999999
Q ss_pred eEEEEeecCCCCHHHHhccCC----CCHHHHHHHHHHHHHHHHHHhhCCC--ccccCCCCCCEEecCCCceEEeeccCC-
Q 045127 310 RAIVTEWTNGGNVELWLSESA----PSWKHRLKVLIGVVEAMCYLQEQWP--EVDYDLRTGSVLLTDNLEPLISRFKIE- 382 (508)
Q Consensus 310 ~~lv~e~~~~gsL~~~l~~~~----l~~~~~~~i~~~i~~~L~~LH~~~~--iiH~Dlkp~NIll~~~~~~kl~Dfg~~- 382 (508)
.++||||+++|+|.+++.... +++..+..++.|++.||+|||++ | |+||||||+||+++.++.+||+|||.+
T Consensus 109 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~ 187 (309)
T 3p86_A 109 LSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSR 187 (309)
T ss_dssp CEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS-SSCCCCTTCCGGGEEECTTCCEEECCCC---
T ss_pred eEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC-CCCEECCCCChhhEEEeCCCcEEECCCCCCc
Confidence 999999999999999998433 89999999999999999999999 9 999999999999999999999999874
Q ss_pred --------------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhh
Q 045127 383 --------------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDE 436 (508)
Q Consensus 383 --------------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (508)
..++.++|||||||++|||++|+.||....... ....+.... .
T Consensus 188 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~--~~~~~~~~~---------~ 256 (309)
T 3p86_A 188 LKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQ--VVAAVGFKC---------K 256 (309)
T ss_dssp --------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHH--HHHHHHHSC---------C
T ss_pred cccccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHhcC---------C
Confidence 235678999999999999999999997543211 111111000 0
Q ss_pred cccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhCC
Q 045127 437 RMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSCP 484 (508)
Q Consensus 437 ~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 484 (508)
..... ......+.+++.+||+.||.+|||+.|+++.|+.+.+...
T Consensus 257 ~~~~~---~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~ 301 (309)
T 3p86_A 257 RLEIP---RNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAV 301 (309)
T ss_dssp CCCCC---TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC---
T ss_pred CCCCC---ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhCC
Confidence 00000 1123457789999999999999999999999999987643
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-40 Score=354.31 Aligned_cols=224 Identities=12% Similarity=0.158 Sum_probs=183.3
Q ss_pred hcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEe
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTE 315 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 315 (508)
.++|+..+.||+|+||.||+|.. .+|+.||+|++.... ....+.+.+|+++|+.++|||||++++++.++...|+|||
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~-~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E 234 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH-ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYE 234 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-HHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEE
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccc-hhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEe
Confidence 46899999999999999999997 469999999996543 3356788999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCC--CceEEeeccCCC--------
Q 045127 316 WTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDN--LEPLISRFKIEY-------- 383 (508)
Q Consensus 316 ~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~--~~~kl~Dfg~~~-------- 383 (508)
||+||+|.+++. ...+++.++..++.||+.||+|||++ +|+||||||+|||++.+ +.+||+|||++.
T Consensus 235 ~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~-~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~~ 313 (573)
T 3uto_A 235 FMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN-NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSV 313 (573)
T ss_dssp CCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSEE
T ss_pred ecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeccCChhhccccCCCCCCEEEeeccceeEccCCCce
Confidence 999999999986 45799999999999999999999999 99999999999999854 899999999852
Q ss_pred ------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchH
Q 045127 384 ------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMF 445 (508)
Q Consensus 384 ------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 445 (508)
.++.++||||+||++|||++|+.||......+ ....+..... .+. ++.. .
T Consensus 314 ~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~--~~~~i~~~~~-~~~---~~~~------~ 381 (573)
T 3uto_A 314 KVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDE--TLRNVKSCDW-NMD---DSAF------S 381 (573)
T ss_dssp EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH--HHHHHHTTCC-CCC---SGGG------T
T ss_pred eeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH--HHHHHHhCCC-CCC---cccc------c
Confidence 35668899999999999999999997543211 1111111000 000 0000 1
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 446 DQAEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 446 ~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
.....+.+++.+||+.||.+|||+.|+++
T Consensus 382 ~~s~~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 382 GISEDGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp TSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred CCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 12345678899999999999999999987
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-40 Score=338.20 Aligned_cols=232 Identities=22% Similarity=0.347 Sum_probs=193.9
Q ss_pred hhcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEE
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVT 314 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 314 (508)
..++|+..+.||+|+||.||+|.+. +++.||||.++........+.+.+|++++++++||||+++++++..++..++||
T Consensus 112 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 191 (377)
T 3cbl_A 112 NHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVM 191 (377)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred chHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEE
Confidence 3467888899999999999999985 789999999976666656678999999999999999999999999989999999
Q ss_pred eecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC---------
Q 045127 315 EWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY--------- 383 (508)
Q Consensus 315 e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~--------- 383 (508)
||+++|+|.+++. ...+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++.
T Consensus 192 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~-~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~ 270 (377)
T 3cbl_A 192 ELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESK-CCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAA 270 (377)
T ss_dssp ECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEEC
T ss_pred EcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CcCCcccCHHHEEEcCCCcEEECcCCCceecCCCceee
Confidence 9999999999997 45699999999999999999999999 99999999999999999999999999752
Q ss_pred --------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCc
Q 045127 384 --------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTE 442 (508)
Q Consensus 384 --------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 442 (508)
.++.++|||||||++|||++ |+.||...... .....+.... .+...
T Consensus 271 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~--~~~~~~~~~~----------~~~~~- 337 (377)
T 3cbl_A 271 SGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQ--QTREFVEKGG----------RLPCP- 337 (377)
T ss_dssp CSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHH--HHHHHHHTTC----------CCCCC-
T ss_pred cCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCC----------CCCCC-
Confidence 12457899999999999998 99999754321 1122221111 01111
Q ss_pred chHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhC
Q 045127 443 NMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSC 483 (508)
Q Consensus 443 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 483 (508)
......+.+++.+||+.||++|||++++++.|+++.+.+
T Consensus 338 --~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~~ 376 (377)
T 3cbl_A 338 --ELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKRH 376 (377)
T ss_dssp --TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred --CCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhhc
Confidence 112346778999999999999999999999999998754
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-40 Score=323.27 Aligned_cols=225 Identities=13% Similarity=0.161 Sum_probs=185.4
Q ss_pred hhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEE
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVT 314 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 314 (508)
..++|+..+.||+|+||.||+|.. .+++.||+|++...... ..+.+.+|+.++++++||||+++++++..++..++||
T Consensus 18 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 96 (297)
T 3fxz_A 18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP-KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM 96 (297)
T ss_dssp GGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCS-CHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeeccccc-HHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEE
Confidence 346899999999999999999996 57899999998643322 3567899999999999999999999999999999999
Q ss_pred eecCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC------------
Q 045127 315 EWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE------------ 382 (508)
Q Consensus 315 e~~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~------------ 382 (508)
||+++|+|.+++....+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++
T Consensus 97 e~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 175 (297)
T 3fxz_A 97 EYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSN-QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST 175 (297)
T ss_dssp ECCTTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBCC
T ss_pred ECCCCCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhC-CceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccccCC
Confidence 999999999999988899999999999999999999999 9999999999999999999999999863
Q ss_pred ---------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHH
Q 045127 383 ---------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQ 447 (508)
Q Consensus 383 ---------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 447 (508)
..++.++|||||||++|||++|+.||........ ........ .+.+... ...
T Consensus 176 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-~~~~~~~~---------~~~~~~~---~~~ 242 (297)
T 3fxz_A 176 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA-LYLIATNG---------TPELQNP---EKL 242 (297)
T ss_dssp CCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH-HHHHHHHC---------SCCCSCG---GGS
T ss_pred ccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHhCC---------CCCCCCc---ccc
Confidence 2356789999999999999999999975322110 11111100 0011111 122
Q ss_pred HHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 448 AEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 448 ~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
...+.+++.+||+.||++|||++|+++.
T Consensus 243 ~~~~~~li~~~l~~dp~~Rps~~ell~h 270 (297)
T 3fxz_A 243 SAIFRDFLNRCLEMDVEKRGSAKELLQH 270 (297)
T ss_dssp CHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred CHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 4457788999999999999999999873
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-40 Score=334.96 Aligned_cols=231 Identities=24% Similarity=0.392 Sum_probs=188.9
Q ss_pred hcCCCCCceeeecCCeEEEEEEEC----CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEE
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGILR----DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAI 312 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 312 (508)
.++|+..+.||+|+||.||+|++. ++..||||+++........+.+.+|+.++++++||||+++++++..+...++
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 123 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence 458999999999999999999864 4678999999766666677889999999999999999999999999999999
Q ss_pred EEeecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-------
Q 045127 313 VTEWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------- 383 (508)
Q Consensus 313 v~e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------- 383 (508)
||||+++|+|.+++. ...+++.++..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||++.
T Consensus 124 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 202 (373)
T 2qol_A 124 VTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM-GYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPE 202 (373)
T ss_dssp EEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTCCEEECCC-----------
T ss_pred EEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeCCCCCcceEEEcCCCCEEECcCccccccccCCc
Confidence 999999999999997 34789999999999999999999999 99999999999999999999999998742
Q ss_pred -----------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhccc
Q 045127 384 -----------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMM 439 (508)
Q Consensus 384 -----------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 439 (508)
.++.++|||||||++|||++ |+.||...... .+...+.... ...
T Consensus 203 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~--~~~~~i~~~~----------~~~ 270 (373)
T 2qol_A 203 AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ--DVIKAVDEGY----------RLP 270 (373)
T ss_dssp -----------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHH--HHHHHHHTTE----------ECC
T ss_pred cceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCC----------CCC
Confidence 23557899999999999998 99999754321 1111111110 000
Q ss_pred CCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhC
Q 045127 440 LTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSC 483 (508)
Q Consensus 440 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 483 (508)
.. ......+.+++.+||+.||++||++.||++.|+++....
T Consensus 271 ~~---~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~ 311 (373)
T 2qol_A 271 PP---MDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 311 (373)
T ss_dssp CC---TTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCG
T ss_pred CC---ccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhCc
Confidence 00 122456788999999999999999999999999997653
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-40 Score=331.64 Aligned_cols=231 Identities=17% Similarity=0.257 Sum_probs=191.6
Q ss_pred hcCCCCCceeeecCCeEEEEEEEC--------CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhc-CCCCccceeeEEecC
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGILR--------DGTRVKIEIYKGDVSREIRDEFVEECKLLVQF-QHKNLIRVLGWNNSR 307 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 307 (508)
.++|+..+.||+|+||.||+|.+. ++..||||+++........+.+.+|+.+++++ +||||+++++++...
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 467888999999999999999862 34579999998766666778899999999999 899999999999999
Q ss_pred CeeEEEEeecCCCCHHHHhcc-----------------CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecC
Q 045127 308 RTRAIVTEWTNGGNVELWLSE-----------------SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTD 370 (508)
Q Consensus 308 ~~~~lv~e~~~~gsL~~~l~~-----------------~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~ 370 (508)
+..++||||+++|+|.+++.. ..+++.++..++.||+.||+|||++ ||+||||||+|||++.
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~ 238 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ-KCIHRDLAARNVLVTE 238 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEECT
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC-CeeccccchhhEEECC
Confidence 999999999999999999973 2478999999999999999999999 9999999999999999
Q ss_pred CCceEEeeccCCC-----------------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHH
Q 045127 371 NLEPLISRFKIEY-----------------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIE 420 (508)
Q Consensus 371 ~~~~kl~Dfg~~~-----------------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~ 420 (508)
++.+||+|||++. .++.++|||||||++|||++ |+.||...... .+..
T Consensus 239 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~--~~~~ 316 (370)
T 2psq_A 239 NNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE--ELFK 316 (370)
T ss_dssp TCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GHHH
T ss_pred CCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHH--HHHH
Confidence 9999999998742 24557899999999999999 99999754322 1222
Q ss_pred HHHHhccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhC
Q 045127 421 YIRMHYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSC 483 (508)
Q Consensus 421 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 483 (508)
.+...... .. . ......+.+++.+||+.||++|||+.|+++.|+++....
T Consensus 317 ~~~~~~~~--------~~--~---~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~~ 366 (370)
T 2psq_A 317 LLKEGHRM--------DK--P---ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLT 366 (370)
T ss_dssp HHHTTCCC--------CC--C---TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHhcCCCC--------CC--C---CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHh
Confidence 22111100 00 0 112446778999999999999999999999999987643
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-40 Score=330.30 Aligned_cols=245 Identities=18% Similarity=0.186 Sum_probs=190.2
Q ss_pred hhcCCCCCceeeecCCeEEEEEEECCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCC----eeE
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRR----TRA 311 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~----~~~ 311 (508)
..++|+..+.||+|+||.||+|++. ++.||||++... ........+|+.++++++||||+++++++.... ..+
T Consensus 22 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 98 (322)
T 3soc_A 22 QSMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQ--DKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLW 98 (322)
T ss_dssp TTEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGG--GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEE
T ss_pred chhhchhhheecccCceEEEEEEEC-CCEEEEEEeecC--chHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEE
Confidence 4568999999999999999999986 789999999543 223455677999999999999999999998744 369
Q ss_pred EEEeecCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCC---------CccccCCCCCCEEecCCCceEEeeccCC
Q 045127 312 IVTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQW---------PEVDYDLRTGSVLLTDNLEPLISRFKIE 382 (508)
Q Consensus 312 lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~---------~iiH~Dlkp~NIll~~~~~~kl~Dfg~~ 382 (508)
+||||+++|+|.+++....+++..+..++.|++.||+|||+.+ +|+||||||+||+++.++.+||+|||.+
T Consensus 99 lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a 178 (322)
T 3soc_A 99 LITAFHEKGSLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLA 178 (322)
T ss_dssp EEEECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred EEEecCCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCcc
Confidence 9999999999999999888999999999999999999999873 8999999999999999999999999986
Q ss_pred CC----------------------------------CCCcchhhHHHHHHHHHHhCCCCCcccccCcc-cHHHHHHHhcc
Q 045127 383 YQ----------------------------------HRSTKYVYKFGLFLLEMITNRRPLEEFERGEA-GFIEYIRMHYP 427 (508)
Q Consensus 383 ~~----------------------------------~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~-~~~~~~~~~~~ 427 (508)
.. ++.++|||||||++|||+||+.||........ .+.........
T Consensus 179 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~ 258 (322)
T 3soc_A 179 LKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPS 258 (322)
T ss_dssp EEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCC
T ss_pred cccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCc
Confidence 21 11245999999999999999999976432211 11110000000
Q ss_pred -chhhhhh-----hhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhC
Q 045127 428 -ENLQLVV-----DERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSC 483 (508)
Q Consensus 428 -~~~~~~~-----~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 483 (508)
..+...+ .+.+............+.+++.+||+.||++|||+.||++.|+++.+..
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~~ 320 (322)
T 3soc_A 259 LEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRLT 320 (322)
T ss_dssp HHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred hhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 0011111 1111111112244667899999999999999999999999999997653
|
| >4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-39 Score=315.56 Aligned_cols=228 Identities=17% Similarity=0.279 Sum_probs=190.0
Q ss_pred hcCCCCCceeeecCCeEEEEEEECCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEee
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEW 316 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 316 (508)
.++|+..+.||+|+||.||+|.+.+++.||+|++...... .+++.+|++++++++||||+++++++.++...++||||
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~--~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 86 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS--EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEF 86 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSBC--HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred hhhceeeheecCCCccEEEEEEecCCCeEEEEEecccccC--HHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEe
Confidence 3578889999999999999999988899999999754432 46789999999999999999999999999999999999
Q ss_pred cCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-----------
Q 045127 317 TNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY----------- 383 (508)
Q Consensus 317 ~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~----------- 383 (508)
+++++|.+++. ...+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||.+.
T Consensus 87 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~-~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 165 (269)
T 4hcu_A 87 MEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA-CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST 165 (269)
T ss_dssp CTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTT
T ss_pred CCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhC-CeecCCcchheEEEcCCCCEEecccccccccccccccccc
Confidence 99999999997 45589999999999999999999999 99999999999999999999999998742
Q ss_pred -----------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchH
Q 045127 384 -----------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMF 445 (508)
Q Consensus 384 -----------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 445 (508)
.++.++||||||+++|||++ |+.||...... .....+..... ... . .
T Consensus 166 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~--~~~~~~~~~~~--------~~~--~---~ 230 (269)
T 4hcu_A 166 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS--EVVEDISTGFR--------LYK--P---R 230 (269)
T ss_dssp STTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHHHHTTCC--------CCC--C---T
T ss_pred CcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHH--HHHHHHhcCcc--------CCC--C---C
Confidence 34567899999999999999 99999753321 11111111110 000 0 1
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhh
Q 045127 446 DQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKS 482 (508)
Q Consensus 446 ~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 482 (508)
.....+.+++.+||+.||++|||+.|+++.|+++.++
T Consensus 231 ~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 231 LASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred cCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence 1134577899999999999999999999999999875
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-39 Score=323.51 Aligned_cols=236 Identities=14% Similarity=0.158 Sum_probs=192.5
Q ss_pred CCCCCHHHHHHhhcC----------CCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcC
Q 045127 225 NHKFTTWMLKAATNG----------FSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQ 293 (508)
Q Consensus 225 ~~~~~~~~l~~~~~~----------~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~ 293 (508)
.+.++.++++.+++. |+..+.||+|+||.||+|... +|+.||||++...... ..+.+.+|+.++++++
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~ 100 (321)
T 2c30_A 22 SGVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQ-RRELLFNEVVIMRDYQ 100 (321)
T ss_dssp ---CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC-SHHHHHHHHHHHTTCC
T ss_pred CCcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchh-HHHHHHHHHHHHHhCC
Confidence 356888888888865 666789999999999999985 7999999999654332 4577899999999999
Q ss_pred CCCccceeeEEecCCeeEEEEeecCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCc
Q 045127 294 HKNLIRVLGWNNSRRTRAIVTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLE 373 (508)
Q Consensus 294 h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~ 373 (508)
||||+++++++...+..++||||+++++|.+++....+++..+..++.|++.||+|||+. ||+||||||+||+++.++.
T Consensus 101 h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~l~~~~~~~i~~qi~~~L~~LH~~-~ivH~Dlkp~NIll~~~~~ 179 (321)
T 2c30_A 101 HFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQ-GVIHRDIKSDSILLTLDGR 179 (321)
T ss_dssp CTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTCC
T ss_pred CCCcceEEEEEEECCEEEEEEecCCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEECCCCc
Confidence 999999999999999999999999999999999988899999999999999999999999 9999999999999999999
Q ss_pred eEEeeccCCC---------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhc
Q 045127 374 PLISRFKIEY---------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHY 426 (508)
Q Consensus 374 ~kl~Dfg~~~---------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~ 426 (508)
+||+|||++. .++.++||||||+++|||++|+.||...... .....+....
T Consensus 180 ~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~--~~~~~~~~~~ 257 (321)
T 2c30_A 180 VKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPV--QAMKRLRDSP 257 (321)
T ss_dssp EEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHHHHHSS
T ss_pred EEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHhcCC
Confidence 9999998632 3466899999999999999999999743211 1111111111
Q ss_pred cchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 427 PENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 427 ~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
.+.+... ......+.+++.+||+.||++|||+.|+++.
T Consensus 258 --------~~~~~~~---~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 258 --------PPKLKNS---HKVSPVLRDFLERMLVRDPQERATAQELLDH 295 (321)
T ss_dssp --------CCCCTTG---GGSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred --------CCCcCcc---ccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1111110 1123457788999999999999999999874
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-40 Score=320.83 Aligned_cols=234 Identities=14% Similarity=0.102 Sum_probs=191.1
Q ss_pred hcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCC--HHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEE
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVS--REIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIV 313 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 313 (508)
.++|+..+.||+|+||.||+|... +++.||||++..... ....+.+.+|+..+++++||||+++++++..++..|+|
T Consensus 30 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 109 (286)
T 3uqc_A 30 NGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVV 109 (286)
T ss_dssp TTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred cCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEE
Confidence 367999999999999999999984 589999999975433 34567899999999999999999999999999999999
Q ss_pred EeecCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCCCCCCcchhhH
Q 045127 314 TEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEYQHRSTKYVYK 393 (508)
Q Consensus 314 ~e~~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~Dv~S 393 (508)
|||+++++|.+++... ....++.+|+.|++.||+|||++ ||+||||||+||+++.++.+||++++....++.++||||
T Consensus 110 ~e~~~g~~L~~~l~~~-~~~~~~~~i~~ql~~aL~~lH~~-givH~Dikp~NIll~~~g~~kl~~~~~~~~~~~~~Di~s 187 (286)
T 3uqc_A 110 AEWIRGGSLQEVADTS-PSPVGAIRAMQSLAAAADAAHRA-GVALSIDHPSRVRVSIDGDVVLAYPATMPDANPQDDIRG 187 (286)
T ss_dssp EECCCEEEHHHHHTTC-CCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCSGGGEEEETTSCEEECSCCCCTTCCHHHHHHH
T ss_pred EEecCCCCHHHHHhcC-CChHHHHHHHHHHHHHHHHHHHC-CCccCCCCcccEEEcCCCCEEEEeccccCCCCchhHHHH
Confidence 9999999999999754 46667899999999999999999 999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCcccccCcccHHHHHHHhccch--hhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHH
Q 045127 394 FGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPEN--LQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQ 471 (508)
Q Consensus 394 lGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~e 471 (508)
|||++|||+||+.||........... ........ ......+ .....+.+++.+||+.||++| |+.|
T Consensus 188 lG~il~elltg~~Pf~~~~~~~~~~~--~~~~~~~~~~~~~~~~~---------~~~~~l~~li~~~l~~dP~~R-s~~e 255 (286)
T 3uqc_A 188 IGASLYALLVNRWPLPEAGVRSGLAP--AERDTAGQPIEPADIDR---------DIPFQISAVAARSVQGDGGIR-SAST 255 (286)
T ss_dssp HHHHHHHHHHSEECSCCCSBCCCSEE--CCBCTTSCBCCHHHHCT---------TSCHHHHHHHHHHHCTTSSCC-CHHH
T ss_pred HHHHHHHHHHCCCCCCcCCcchhhHH--HHHHhccCCCChhhccc---------CCCHHHHHHHHHHcccCCccC-CHHH
Confidence 99999999999999986442210000 00000000 0000001 123457789999999999999 9999
Q ss_pred HHHHHHHHHhhCC
Q 045127 472 IYNMITRAYKSCP 484 (508)
Q Consensus 472 vl~~L~~i~~~~~ 484 (508)
+++.|+++.....
T Consensus 256 l~~~L~~~~~~~~ 268 (286)
T 3uqc_A 256 LLNLMQQATAVAD 268 (286)
T ss_dssp HHHHHHHHHC---
T ss_pred HHHHHHHHhccCC
Confidence 9999999876543
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-39 Score=319.62 Aligned_cols=234 Identities=14% Similarity=0.231 Sum_probs=185.6
Q ss_pred hhcCCCCCceeeecCCeEEEEEEECCCCEEEEEEecCCCCHHHHHHHHHHHHHHhh--cCCCCccceeeEEec----CCe
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQ--FQHKNLIRVLGWNNS----RRT 309 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~~~~~~~~----~~~ 309 (508)
..++|+..+.||+|+||.||+|.+ +++.||||++... ....+.+|.+++.. ++||||+++++++.. ...
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~----~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~ 80 (301)
T 3q4u_A 6 VARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR----DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQ 80 (301)
T ss_dssp CGGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG----GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEE
T ss_pred ccCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc----cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCce
Confidence 457899999999999999999998 6899999999543 34556667777666 789999999998654 345
Q ss_pred eEEEEeecCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHh--------hCCCccccCCCCCCEEecCCCceEEeeccC
Q 045127 310 RAIVTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQ--------EQWPEVDYDLRTGSVLLTDNLEPLISRFKI 381 (508)
Q Consensus 310 ~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH--------~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~ 381 (508)
.++||||+++|+|.++++...+++..+..++.|++.||+||| +. +|+||||||+||+++.++.+||+|||+
T Consensus 81 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~-~ivH~Dlkp~Nill~~~~~~kl~Dfg~ 159 (301)
T 3q4u_A 81 LWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP-AIAHRDLKSKNILVKKNGQCCIADLGL 159 (301)
T ss_dssp EEEEECCCTTCBHHHHHTTCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC-EEECSCCCGGGEEECTTSCEEECCCTT
T ss_pred eEEehhhccCCCHHHHHhhcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC-CeecCCCChHhEEEcCCCCEEEeeCCC
Confidence 799999999999999999889999999999999999999999 88 999999999999999999999999997
Q ss_pred CC-------------------------------------CCCCcchhhHHHHHHHHHHhC----------CCCCcccccC
Q 045127 382 EY-------------------------------------QHRSTKYVYKFGLFLLEMITN----------RRPLEEFERG 414 (508)
Q Consensus 382 ~~-------------------------------------~~~~~~Dv~SlGvil~elltg----------~~P~~~~~~~ 414 (508)
+. .++.++|||||||++|||++| +.||......
T Consensus 160 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~ 239 (301)
T 3q4u_A 160 AVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPN 239 (301)
T ss_dssp CEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCS
T ss_pred eeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCC
Confidence 41 112478999999999999999 8888765443
Q ss_pred cccHHHHHHHhccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHH
Q 045127 415 EAGFIEYIRMHYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRA 479 (508)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i 479 (508)
............... ..+.+............+.+++.+||+.||++|||+.||++.|+++
T Consensus 240 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 240 DPSFEDMRKVVCVDQ----QRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp SCCHHHHHHHHTTSC----CCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred CcchhhhhHHHhccC----CCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 333332222111111 0111111111224567889999999999999999999999999876
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-39 Score=314.09 Aligned_cols=229 Identities=18% Similarity=0.288 Sum_probs=189.5
Q ss_pred hhcCCCCCceeeecCCeEEEEEEECCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEe
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTE 315 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 315 (508)
..++|+..+.||+|+||.||+|.+.++..||+|++...... .+++.+|++++++++||||+++++++..+...++|||
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~--~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (268)
T 3sxs_A 6 KREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMS--EDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTE 83 (268)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTBC--HHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred chhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCCc--HHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEE
Confidence 34678899999999999999999988889999999754432 4678999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC----------
Q 045127 316 WTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY---------- 383 (508)
Q Consensus 316 ~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~---------- 383 (508)
|+++++|.+++. ...+++..+..++.|++.||+|||+. |++||||||+||+++.++.+||+|||.+.
T Consensus 84 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 162 (268)
T 3sxs_A 84 YISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESH-QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSS 162 (268)
T ss_dssp CCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT-TEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEEC
T ss_pred ccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCcCcceEEECCCCCEEEccCccceecchhhhhcc
Confidence 999999999998 45699999999999999999999999 99999999999999999999999998642
Q ss_pred ------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcch
Q 045127 384 ------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENM 444 (508)
Q Consensus 384 ------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 444 (508)
.++.++||||||+++|||++ |+.||+...... ....+.... .....
T Consensus 163 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--~~~~~~~~~----------~~~~~--- 227 (268)
T 3sxs_A 163 VGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSE--VVLKVSQGH----------RLYRP--- 227 (268)
T ss_dssp CSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHH--HHHHHHTTC----------CCCCC---
T ss_pred cCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHH--HHHHHHcCC----------CCCCC---
Confidence 34568999999999999999 999997543211 111111100 00000
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhh
Q 045127 445 FDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKS 482 (508)
Q Consensus 445 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 482 (508)
......+.+++.+||+.||++|||+.|+++.|+.+.+.
T Consensus 228 ~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (268)
T 3sxs_A 228 HLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK 265 (268)
T ss_dssp TTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred CcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence 01134577899999999999999999999999988654
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-39 Score=323.25 Aligned_cols=225 Identities=16% Similarity=0.204 Sum_probs=186.6
Q ss_pred HHhhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCC-CHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeE
Q 045127 234 KAATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDV-SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRA 311 (508)
Q Consensus 234 ~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 311 (508)
....++|+..+.||+|+||.||+|.+ .+|+.||||++.... .....+.+.+|+++++.++||||+++++++...+..+
T Consensus 11 ~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~ 90 (328)
T 3fe3_A 11 QPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLY 90 (328)
T ss_dssp CCEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred CCccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEE
Confidence 34567899999999999999999997 679999999996433 3445678899999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCCC------
Q 045127 312 IVTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEYQ------ 384 (508)
Q Consensus 312 lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~------ 384 (508)
+||||+++|+|.+++. ...+++.++..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++..
T Consensus 91 lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~-~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 169 (328)
T 3fe3_A 91 LIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQK-RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK 169 (328)
T ss_dssp EEECCCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCG
T ss_pred EEEECCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC-CEeccCCCHHHEEEcCCCCEEEeeccCceecCCCCc
Confidence 9999999999999987 67899999999999999999999999 999999999999999999999999997521
Q ss_pred --------------------C-CCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcc
Q 045127 385 --------------------H-RSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTEN 443 (508)
Q Consensus 385 --------------------~-~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 443 (508)
+ +.++|||||||++|||++|+.||+.... ....... .......+.
T Consensus 170 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-----~~~~~~i--------~~~~~~~p~- 235 (328)
T 3fe3_A 170 LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL-----KELRERV--------LRGKYRIPF- 235 (328)
T ss_dssp GGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHHH--------HHCCCCCCT-
T ss_pred cccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCH-----HHHHHHH--------HhCCCCCCC-
Confidence 1 3578999999999999999999975321 1111111 111111111
Q ss_pred hHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 444 MFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 444 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
.....+.+++.+||+.||.+|||++|+++.
T Consensus 236 --~~s~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 236 --YMSTDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp --TSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred --CCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 123456788999999999999999999874
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-40 Score=325.95 Aligned_cols=247 Identities=17% Similarity=0.198 Sum_probs=193.9
Q ss_pred cCC-CCCceeeecCCeEEEEEEEC-----CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEec--CCe
Q 045127 238 NGF-SKKNLVGKNEGAAIYKGILR-----DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNS--RRT 309 (508)
Q Consensus 238 ~~~-~~~~~lg~G~~g~V~~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~ 309 (508)
++| +..+.||+|+||.||++.+. +++.||||+++........+.+.+|++++++++||||+++++++.+ ...
T Consensus 30 ~r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 109 (318)
T 3lxp_A 30 KRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAAS 109 (318)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTE
T ss_pred HHHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCce
Confidence 344 88899999999999998752 5789999999877666677889999999999999999999999987 467
Q ss_pred eEEEEeecCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCCC-----
Q 045127 310 RAIVTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEYQ----- 384 (508)
Q Consensus 310 ~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~----- 384 (508)
.++||||+++|+|.+++....+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||.+..
T Consensus 110 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~i~~~l~~~l~~LH~~-~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~ 188 (318)
T 3lxp_A 110 LQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQ-HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGH 188 (318)
T ss_dssp EEEEECCCTTCBHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTCCEEECCGGGCEECCTTC
T ss_pred EEEEEecccCCcHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhC-CccCCCCchheEEEcCCCCEEECCccccccccccc
Confidence 89999999999999999988899999999999999999999999 999999999999999999999999987531
Q ss_pred -------------------------CCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhc-cchhhhhhhhcc
Q 045127 385 -------------------------HRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHY-PENLQLVVDERM 438 (508)
Q Consensus 385 -------------------------~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l 438 (508)
++.++||||||+++|||++|+.||............+..... .....+.+....
T Consensus 189 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (318)
T 3lxp_A 189 EYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGE 268 (318)
T ss_dssp SEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTTC
T ss_pred cccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhccc
Confidence 234679999999999999999998743211100000000000 000111111111
Q ss_pred cCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhCCCC
Q 045127 439 MLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSCPIL 486 (508)
Q Consensus 439 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~ 486 (508)
.. .........+.+++.+||+.||++|||+.|+++.|+++.+.+...
T Consensus 269 ~~-~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~~~ 315 (318)
T 3lxp_A 269 RL-PRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQGQ 315 (318)
T ss_dssp CC-CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHC-
T ss_pred CC-CCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhccC
Confidence 00 011123457888999999999999999999999999998876543
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-39 Score=323.03 Aligned_cols=226 Identities=12% Similarity=0.164 Sum_probs=183.4
Q ss_pred hhcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEE
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVT 314 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 314 (508)
..++|+..+.||+|+||.||+|... +++.||+|++.........+.+.+|+.+++.++||||+++++++.++...++||
T Consensus 5 ~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~ 84 (323)
T 3tki_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL 84 (323)
T ss_dssp TTTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HhhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEE
Confidence 3478999999999999999999975 789999999975544444577899999999999999999999999999999999
Q ss_pred eecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCCC---------
Q 045127 315 EWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEYQ--------- 384 (508)
Q Consensus 315 e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~--------- 384 (508)
||+++|+|.+++. ...+++.++..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||.+..
T Consensus 85 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~-givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 163 (323)
T 3tki_A 85 EYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI-GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 163 (323)
T ss_dssp ECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECC
T ss_pred EcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC-CccccccchHHEEEeCCCCEEEEEeeccceeccCCcccc
Confidence 9999999999998 55799999999999999999999999 999999999999999999999999997521
Q ss_pred ---------------------CCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcc
Q 045127 385 ---------------------HRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTEN 443 (508)
Q Consensus 385 ---------------------~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 443 (508)
.+.++|||||||++|||++|+.||............+....... .+
T Consensus 164 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~------~~------- 230 (323)
T 3tki_A 164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL------NP------- 230 (323)
T ss_dssp BCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTTS------TT-------
T ss_pred cCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccccC------Cc-------
Confidence 13468999999999999999999976544332222222111100 00
Q ss_pred hHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 444 MFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 444 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
.......+.+++.+||+.||++|||+.|+++.
T Consensus 231 ~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 231 WKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred cccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 01123456788999999999999999999875
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-39 Score=327.80 Aligned_cols=241 Identities=15% Similarity=0.239 Sum_probs=196.3
Q ss_pred CCCHHHHHHhhcCCCCCceeeecCCeEEEEEEE------CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhc-CCCCccc
Q 045127 227 KFTTWMLKAATNGFSKKNLVGKNEGAAIYKGIL------RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQF-QHKNLIR 299 (508)
Q Consensus 227 ~~~~~~l~~~~~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~ 299 (508)
.+...+.....++|+..+.||+|+||.||+|.+ .+++.||||+++........+.+.+|+++++++ +||||++
T Consensus 11 ~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~ 90 (359)
T 3vhe_A 11 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 90 (359)
T ss_dssp CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred CCCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceee
Confidence 345556667788999999999999999999984 245789999998766666678899999999999 7999999
Q ss_pred eeeEEecCC-eeEEEEeecCCCCHHHHhccCC------------------------------------------------
Q 045127 300 VLGWNNSRR-TRAIVTEWTNGGNVELWLSESA------------------------------------------------ 330 (508)
Q Consensus 300 ~~~~~~~~~-~~~lv~e~~~~gsL~~~l~~~~------------------------------------------------ 330 (508)
+++++...+ ..++||||+++|+|.+++....
T Consensus 91 ~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (359)
T 3vhe_A 91 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEE 170 (359)
T ss_dssp EEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-----------------------------------------
T ss_pred eeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccc
Confidence 999988754 4899999999999999997321
Q ss_pred -------------------CCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC--------
Q 045127 331 -------------------PSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY-------- 383 (508)
Q Consensus 331 -------------------l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~-------- 383 (508)
+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||.+.
T Consensus 171 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~-~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 249 (359)
T 3vhe_A 171 KSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 249 (359)
T ss_dssp -------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTC
T ss_pred cccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC-CcccCCCChhhEEEcCCCcEEEEeccceeeecccccc
Confidence 89999999999999999999999 99999999999999999999999998753
Q ss_pred ---------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCC
Q 045127 384 ---------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLT 441 (508)
Q Consensus 384 ---------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 441 (508)
.++.++|||||||++|||+| |+.||....... .+...+...... .. .
T Consensus 250 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-~~~~~~~~~~~~--------~~--~ 318 (359)
T 3vhe_A 250 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-EFCRRLKEGTRM--------RA--P 318 (359)
T ss_dssp EEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH-HHHHHHHHTCCC--------CC--C
T ss_pred hhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH-HHHHHHHcCCCC--------CC--C
Confidence 23557899999999999998 999997543322 111111111110 00 0
Q ss_pred cchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhh
Q 045127 442 ENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKS 482 (508)
Q Consensus 442 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 482 (508)
......+.+++.+||+.||++|||+.|+++.|+++.+.
T Consensus 319 ---~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 356 (359)
T 3vhe_A 319 ---DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 356 (359)
T ss_dssp ---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ---CCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHH
Confidence 01234577889999999999999999999999998765
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-39 Score=327.77 Aligned_cols=239 Identities=17% Similarity=0.223 Sum_probs=195.3
Q ss_pred hhcCCCCCceeeecCCeEEEEEEEC--------CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhc-CCCCccceeeEEec
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGILR--------DGTRVKIEIYKGDVSREIRDEFVEECKLLVQF-QHKNLIRVLGWNNS 306 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~ 306 (508)
..++|...+.||+|+||.||+|... .+..||||+++..........+.+|+++++++ +||||+++++++..
T Consensus 67 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 146 (382)
T 3tt0_A 67 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 146 (382)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred chhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeecc
Confidence 3467888999999999999999862 23579999998776666778899999999999 89999999999999
Q ss_pred CCeeEEEEeecCCCCHHHHhcc-----------------CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEec
Q 045127 307 RRTRAIVTEWTNGGNVELWLSE-----------------SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLT 369 (508)
Q Consensus 307 ~~~~~lv~e~~~~gsL~~~l~~-----------------~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~ 369 (508)
++..++||||+++|+|.+++.. ..+++.++..++.|++.||+|||++ ||+||||||+||+++
T Consensus 147 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~ 225 (382)
T 3tt0_A 147 DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK-KCIHRDLAARNVLVT 225 (382)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEEC
T ss_pred CCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC-CEecCCCCcceEEEc
Confidence 9999999999999999999973 2489999999999999999999999 999999999999999
Q ss_pred CCCceEEeeccCCC-----------------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHH
Q 045127 370 DNLEPLISRFKIEY-----------------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFI 419 (508)
Q Consensus 370 ~~~~~kl~Dfg~~~-----------------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~ 419 (508)
.++.+||+|||.+. .++.++|||||||++|||++ |+.||...... .+.
T Consensus 226 ~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~--~~~ 303 (382)
T 3tt0_A 226 EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE--ELF 303 (382)
T ss_dssp TTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--HHH
T ss_pred CCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH--HHH
Confidence 99999999998753 23457899999999999999 99999753311 111
Q ss_pred HHHHHhccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCC
Q 045127 420 EYIRMHYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSCPILTSEN 490 (508)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~~~ 490 (508)
..+..... ... . ......+.+++.+||+.||++|||+.||++.|+++.........+.
T Consensus 304 ~~~~~~~~--------~~~--~---~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~~~~~ 361 (382)
T 3tt0_A 304 KLLKEGHR--------MDK--P---SNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQEMGY 361 (382)
T ss_dssp HHHHTTCC--------CCC--C---SSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSCSCC---
T ss_pred HHHHcCCC--------CCC--C---ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhcCCCCC
Confidence 11111110 000 0 1124567789999999999999999999999999988776555443
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-38 Score=312.97 Aligned_cols=235 Identities=14% Similarity=0.188 Sum_probs=191.0
Q ss_pred hcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCC--CCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEE
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGD--VSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIV 313 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 313 (508)
.++|+..+.||+|+||.||+|.. .+++.||+|.+... ......+.+.+|+.++++++||||+++++++..++..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 46799999999999999999997 46899999998543 2334567899999999999999999999999999999999
Q ss_pred EeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC---------
Q 045127 314 TEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY--------- 383 (508)
Q Consensus 314 ~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~--------- 383 (508)
|||+++++|.+++. ...+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||.+.
T Consensus 90 ~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 168 (294)
T 4eqm_A 90 MEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDM-RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQ 168 (294)
T ss_dssp EECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTSCEEECCCSSSTTC-------
T ss_pred EeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEECCCCCEEEEeCCCccccccccccc
Confidence 99999999999998 56799999999999999999999999 99999999999999999999999998752
Q ss_pred -------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcch
Q 045127 384 -------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENM 444 (508)
Q Consensus 384 -------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 444 (508)
.++.++||||||+++|||++|+.||....... ................ ..
T Consensus 169 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~-----~~~~~~~~~~~~~~~~-~~----- 237 (294)
T 4eqm_A 169 TNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVS-----IAIKHIQDSVPNVTTD-VR----- 237 (294)
T ss_dssp ------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHH-----HHHHHHSSCCCCHHHH-SC-----
T ss_pred cCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH-----HHHHHhhccCCCcchh-cc-----
Confidence 24567999999999999999999997533211 1111111111000000 00
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCC-CHHHHHHHHHHHHhhC
Q 045127 445 FDQAEQGLGLGLMCTDQPTGKLP-SLVQIYNMITRAYKSC 483 (508)
Q Consensus 445 ~~~~~~l~~l~~~Cl~~dP~~RP-s~~evl~~L~~i~~~~ 483 (508)
......+.+++.+|++.||.+|| +++++.+.|+++....
T Consensus 238 ~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~ 277 (294)
T 4eqm_A 238 KDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHEN 277 (294)
T ss_dssp TTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSS
T ss_pred cCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhc
Confidence 01235677899999999999998 9999999998876543
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-39 Score=324.31 Aligned_cols=236 Identities=19% Similarity=0.327 Sum_probs=194.3
Q ss_pred HHHhhcCCCCCceeeecCCeEEEEEEEC------CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEec
Q 045127 233 LKAATNGFSKKNLVGKNEGAAIYKGILR------DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNS 306 (508)
Q Consensus 233 l~~~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 306 (508)
+....++|+..+.||+|+||.||+|... +++.||+|+++........+.+.+|+.++++++||||+++++++..
T Consensus 42 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~ 121 (343)
T 1luf_A 42 LEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAV 121 (343)
T ss_dssp TBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS
T ss_pred eEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc
Confidence 3445688999999999999999999974 3478999999876666667889999999999999999999999999
Q ss_pred CCeeEEEEeecCCCCHHHHhcc-------------------------CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCC
Q 045127 307 RRTRAIVTEWTNGGNVELWLSE-------------------------SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDL 361 (508)
Q Consensus 307 ~~~~~lv~e~~~~gsL~~~l~~-------------------------~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dl 361 (508)
++..++||||+++|+|.+++.. ..+++.++..++.||++||+|||++ ||+||||
T Consensus 122 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~-~ivH~Dl 200 (343)
T 1luf_A 122 GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER-KFVHRDL 200 (343)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCC
T ss_pred CCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCC
Confidence 9999999999999999999973 5789999999999999999999999 9999999
Q ss_pred CCCCEEecCCCceEEeeccCC-----------------------------CCCCCcchhhHHHHHHHHHHh-CCCCCccc
Q 045127 362 RTGSVLLTDNLEPLISRFKIE-----------------------------YQHRSTKYVYKFGLFLLEMIT-NRRPLEEF 411 (508)
Q Consensus 362 kp~NIll~~~~~~kl~Dfg~~-----------------------------~~~~~~~Dv~SlGvil~ellt-g~~P~~~~ 411 (508)
||+||+++.++.+||+|||.+ ..++.++||||||+++|||++ |+.||...
T Consensus 201 kp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 280 (343)
T 1luf_A 201 ATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGM 280 (343)
T ss_dssp SGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS
T ss_pred CcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCC
Confidence 999999999999999999863 234568999999999999999 99999753
Q ss_pred ccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhCC
Q 045127 412 ERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSCP 484 (508)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 484 (508)
... .+...+.. ....... ......+.+++.+||+.||++|||+.++++.|+++.+...
T Consensus 281 ~~~--~~~~~~~~-----------~~~~~~~--~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~~ 338 (343)
T 1luf_A 281 AHE--EVIYYVRD-----------GNILACP--ENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERAE 338 (343)
T ss_dssp CHH--HHHHHHHT-----------TCCCCCC--TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC---
T ss_pred ChH--HHHHHHhC-----------CCcCCCC--CCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhhh
Confidence 321 11111111 1110000 1123467789999999999999999999999999876553
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-39 Score=312.88 Aligned_cols=229 Identities=21% Similarity=0.307 Sum_probs=188.0
Q ss_pred hhcCCCCCceeeecCCeEEEEEEECCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEe
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTE 315 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 315 (508)
..++|+..+.||+|+||.||+|.+.++..||+|++...... .+++.+|++++++++||||+++++++.+....++|||
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~--~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 99 (283)
T 3gen_A 22 DPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS--EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITE 99 (283)
T ss_dssp CGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSBC--HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEC
T ss_pred CHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCC--HHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEe
Confidence 45678889999999999999999988889999999754432 4678999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC----------
Q 045127 316 WTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY---------- 383 (508)
Q Consensus 316 ~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~---------- 383 (508)
|+++++|.+++. ...+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||.+.
T Consensus 100 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~ 178 (283)
T 3gen_A 100 YMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK-QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS 178 (283)
T ss_dssp CCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHST
T ss_pred ccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHC-CccCCCCccceEEEcCCCCEEEccccccccccccccccc
Confidence 999999999997 46799999999999999999999999 99999999999999999999999998742
Q ss_pred ------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcch
Q 045127 384 ------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENM 444 (508)
Q Consensus 384 ------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 444 (508)
.++.++||||||+++|||++ |+.||....... ....+.... .....
T Consensus 179 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~--~~~~~~~~~--------~~~~~----- 243 (283)
T 3gen_A 179 VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE--TAEHIAQGL--------RLYRP----- 243 (283)
T ss_dssp TSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH--HHHHHHTTC--------CCCCC-----
T ss_pred cCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhH--HHHHHhccc--------CCCCC-----
Confidence 34567899999999999998 999997543211 111111110 00000
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhh
Q 045127 445 FDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKS 482 (508)
Q Consensus 445 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 482 (508)
......+.+++.+||+.||++|||+.|+++.|+++.+.
T Consensus 244 ~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~ 281 (283)
T 3gen_A 244 HLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDE 281 (283)
T ss_dssp TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhc
Confidence 01134677899999999999999999999999998764
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-39 Score=316.15 Aligned_cols=241 Identities=17% Similarity=0.209 Sum_probs=189.0
Q ss_pred hcCCCCCceeeecCCeEEEEEEE-----CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEec--CCe
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGIL-----RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNS--RRT 309 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~ 309 (508)
.++|+..+.||+|+||.||+|++ .+++.||||++... .....+.+.+|++++++++||||+++++++.. ...
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 87 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 87 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTS
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccC-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCc
Confidence 46788999999999999999985 35789999999644 34466789999999999999999999999864 356
Q ss_pred eEEEEeecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC----
Q 045127 310 RAIVTEWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY---- 383 (508)
Q Consensus 310 ~~lv~e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~---- 383 (508)
.++||||+++|+|.+++. ...+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||.+.
T Consensus 88 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 166 (295)
T 3ugc_A 88 LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 166 (295)
T ss_dssp CEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEEEETTEEEECCCCSCC----
T ss_pred eEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcC-CcccCCCCHhhEEEcCCCeEEEccCcccccccC
Confidence 899999999999999997 34599999999999999999999999 99999999999999999999999998753
Q ss_pred --------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccc-----hhhh
Q 045127 384 --------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPE-----NLQL 432 (508)
Q Consensus 384 --------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~-----~~~~ 432 (508)
.++.++||||||+++|||+||..|+...... ........... ...+
T Consensus 167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 243 (295)
T 3ugc_A 167 DKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE---FMRMIGNDKQGQMIVFHLIE 243 (295)
T ss_dssp ---------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHH---HHHHHCTTCCTHHHHHHHHH
T ss_pred CcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHH---HHhhhcCccccchhHHHHHH
Confidence 2355789999999999999999998643211 01100000000 0111
Q ss_pred hhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhC
Q 045127 433 VVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSC 483 (508)
Q Consensus 433 ~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 483 (508)
.+..... ..........+.+++.+||+.||++|||+.|+++.|+++.+..
T Consensus 244 ~~~~~~~-~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~l 293 (295)
T 3ugc_A 244 LLKNNGR-LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293 (295)
T ss_dssp HHHTTCC-CCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred HHhccCc-CCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhc
Confidence 1111100 0011123466888999999999999999999999999998764
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-39 Score=319.04 Aligned_cols=231 Identities=19% Similarity=0.275 Sum_probs=192.2
Q ss_pred hhcCCCCCceeeecCCeEEEEEEE------CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCe
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGIL------RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRT 309 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 309 (508)
..++|...+.||+|+||.||+|.. .+++.||+|+++........+.+.+|++++++++||||+++++++...+.
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 100 (314)
T 2ivs_A 21 PRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGP 100 (314)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred chhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCc
Confidence 456788999999999999999986 23578999999876666677889999999999999999999999999999
Q ss_pred eEEEEeecCCCCHHHHhcc-------------------------CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCC
Q 045127 310 RAIVTEWTNGGNVELWLSE-------------------------SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTG 364 (508)
Q Consensus 310 ~~lv~e~~~~gsL~~~l~~-------------------------~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~ 364 (508)
.++||||+++|+|.+++.. ..+++.++..++.|+++||+|||++ ||+||||||+
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~dikp~ 179 (314)
T 2ivs_A 101 LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM-KLVHRDLAAR 179 (314)
T ss_dssp CEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGG
T ss_pred eEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC-CCcccccchh
Confidence 9999999999999999972 2378999999999999999999999 9999999999
Q ss_pred CEEecCCCceEEeeccCCC-----------------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccC
Q 045127 365 SVLLTDNLEPLISRFKIEY-----------------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERG 414 (508)
Q Consensus 365 NIll~~~~~~kl~Dfg~~~-----------------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~ 414 (508)
||+++.++.+||+|||.+. .++.++||||||+++|||++ |+.||......
T Consensus 180 NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~ 259 (314)
T 2ivs_A 180 NILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPE 259 (314)
T ss_dssp GEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG
T ss_pred eEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence 9999999999999998752 13557899999999999999 99999754322
Q ss_pred cccHHHHHHHhccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhh
Q 045127 415 EAGFIEYIRMHYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKS 482 (508)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 482 (508)
. +...+...... .. . ......+.+++.+||+.||++|||+.|+++.|+++...
T Consensus 260 ~--~~~~~~~~~~~--------~~--~---~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 312 (314)
T 2ivs_A 260 R--LFNLLKTGHRM--------ER--P---DNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK 312 (314)
T ss_dssp G--HHHHHHTTCCC--------CC--C---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred H--HHHHhhcCCcC--------CC--C---ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence 1 22222111100 00 0 11245677899999999999999999999999998764
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-38 Score=316.08 Aligned_cols=243 Identities=16% Similarity=0.193 Sum_probs=190.4
Q ss_pred hcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCC--eeEEE
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRR--TRAIV 313 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~lv 313 (508)
.++|+..+.||+|+||.||+|... +++.||||++.........+.+.+|++++++++||||+++++++.... ..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (319)
T 4euu_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (319)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEE
Confidence 367889999999999999999985 589999999975444444677889999999999999999999988654 77999
Q ss_pred EeecCCCCHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEe----cCCCceEEeeccCC---
Q 045127 314 TEWTNGGNVELWLSE----SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLL----TDNLEPLISRFKIE--- 382 (508)
Q Consensus 314 ~e~~~~gsL~~~l~~----~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll----~~~~~~kl~Dfg~~--- 382 (508)
|||+++|+|.+++.. ..+++.++..++.|++.||+|||++ ||+||||||+||++ +.++.+||+|||.+
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~-~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~ 166 (319)
T 4euu_A 88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN-GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL 166 (319)
T ss_dssp EECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEEECTTSCEEEEECCCTTCEEC
T ss_pred EeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC-CEecCCCCHHHEEEeccCCCCceEEEccCCCceec
Confidence 999999999999982 2389999999999999999999999 99999999999999 78888999999874
Q ss_pred -------------------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCccc--HHHHHHHhccch
Q 045127 383 -------------------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAG--FIEYIRMHYPEN 429 (508)
Q Consensus 383 -------------------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~--~~~~~~~~~~~~ 429 (508)
..++.++|||||||++|||++|+.||......... ....+....+..
T Consensus 167 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~ 246 (319)
T 4euu_A 167 EDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSG 246 (319)
T ss_dssp CTTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTT
T ss_pred CCCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCcc
Confidence 23456899999999999999999999754322211 111111111111
Q ss_pred -h---hhhhhh------cc-cCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHH
Q 045127 430 -L---QLVVDE------RM-MLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAY 480 (508)
Q Consensus 430 -~---~~~~~~------~l-~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~ 480 (508)
. ...... .+ ............+.+++.+||+.||++|||++|+++...+..
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~ 308 (319)
T 4euu_A 247 AISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL 308 (319)
T ss_dssp CCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHT
T ss_pred cchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHh
Confidence 0 000000 01 011112345667888999999999999999999999988654
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-39 Score=324.86 Aligned_cols=244 Identities=12% Similarity=0.180 Sum_probs=192.7
Q ss_pred hhcCCCCCceeeecCCeEEEEEEECC------CCEEEEEEecCCCCHHH----------HHHHHHHHHHHhhcCCCCccc
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGILRD------GTRVKIEIYKGDVSREI----------RDEFVEECKLLVQFQHKNLIR 299 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~~~------~~~vavK~~~~~~~~~~----------~~~~~~E~~~l~~l~h~niv~ 299 (508)
..++|+..+.||+|+||.||+|.+.+ ++.||||++........ ...+..|+..++.++||||++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 45689999999999999999999854 47899999865432110 123445666778889999999
Q ss_pred eeeEEecC----CeeEEEEeecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEec--CC
Q 045127 300 VLGWNNSR----RTRAIVTEWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLT--DN 371 (508)
Q Consensus 300 ~~~~~~~~----~~~~lv~e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~--~~ 371 (508)
+++++... ...++||||+ +++|.+++. ...+++..+..|+.||+.||+|||++ ||+||||||+|||++ .+
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~-~iiHrDlkp~Nill~~~~~ 190 (364)
T 3op5_A 113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEH-EYVHGDIKASNLLLNYKNP 190 (364)
T ss_dssp EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEEESSCT
T ss_pred EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC-CeEEecCCHHHEEEecCCC
Confidence 99998764 4579999999 999999997 36799999999999999999999999 999999999999999 88
Q ss_pred CceEEeeccCCC----------------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCccc
Q 045127 372 LEPLISRFKIEY----------------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAG 417 (508)
Q Consensus 372 ~~~kl~Dfg~~~----------------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~ 417 (508)
+.+||+|||++. .++.++|||||||++|||+||+.||....... .
T Consensus 191 ~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~-~ 269 (364)
T 3op5_A 191 DQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDP-K 269 (364)
T ss_dssp TCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCH-H
T ss_pred CeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCH-H
Confidence 999999999752 23457899999999999999999998643332 2
Q ss_pred HHHHHHHhccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhCCCC
Q 045127 418 FIEYIRMHYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSCPIL 486 (508)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~ 486 (508)
............+.+.+++.+.... ....+.+++..||+.||.+||++.+|++.|+++.......
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~~~ 334 (364)
T 3op5_A 270 YVRDSKIRYRENIASLMDKCFPAAN----APGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIGSK 334 (364)
T ss_dssp HHHHHHHHHHHCHHHHHHHHSCTTC----CCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHhhhhHHHHHHHhccccc----CHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCC
Confidence 3333333344445555555542211 1456778899999999999999999999999998865443
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-38 Score=310.59 Aligned_cols=230 Identities=17% Similarity=0.276 Sum_probs=185.4
Q ss_pred hhcCCCCCceeeecCCeEEEEEEECC----CCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeE
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGILRD----GTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRA 311 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 311 (508)
..++|+..+.||+|+||.||+|.+.. +..||+|.+.........+.+.+|+.++++++||||+++++++. .+..+
T Consensus 13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~ 91 (281)
T 1mp8_A 13 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVW 91 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCE
T ss_pred ehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccE
Confidence 45678899999999999999999742 45799999976666666788999999999999999999999984 45679
Q ss_pred EEEeecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC------
Q 045127 312 IVTEWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------ 383 (508)
Q Consensus 312 lv~e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------ 383 (508)
+||||+++|+|.+++. ...+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||.+.
T Consensus 92 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 170 (281)
T 1mp8_A 92 IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK-RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 170 (281)
T ss_dssp EEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEEEETTEEEECC-----------
T ss_pred EEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC-CeecccccHHHEEECCCCCEEECccccccccCccc
Confidence 9999999999999998 34689999999999999999999999 99999999999999999999999998742
Q ss_pred ----------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhcccC
Q 045127 384 ----------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMML 440 (508)
Q Consensus 384 ----------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 440 (508)
.++.++||||||+++|||++ |+.||....... ....+..... ...
T Consensus 171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~--~~~~i~~~~~----------~~~ 238 (281)
T 1mp8_A 171 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND--VIGRIENGER----------LPM 238 (281)
T ss_dssp --------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--HHHHHHTTCC----------CCC
T ss_pred ccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHH--HHHHHHcCCC----------CCC
Confidence 23457899999999999997 999997543221 2222211110 000
Q ss_pred CcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhh
Q 045127 441 TENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKS 482 (508)
Q Consensus 441 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 482 (508)
. ......+.+++.+||+.||++|||+.|+++.|+++.+.
T Consensus 239 ~---~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 277 (281)
T 1mp8_A 239 P---PNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 277 (281)
T ss_dssp C---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred C---CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 0 11235677899999999999999999999999998764
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-38 Score=315.24 Aligned_cols=234 Identities=19% Similarity=0.273 Sum_probs=193.7
Q ss_pred hhcCCCCCceeeecCCeEEEEEEE------CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhc-CCCCccceeeEEecCC
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGIL------RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQF-QHKNLIRVLGWNNSRR 308 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 308 (508)
..++|+..+.||+|+||.||+|.+ .+++.||+|+++........+.+.+|+.+++++ +||||+++++++..++
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 100 (313)
T 1t46_A 21 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGG 100 (313)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred ChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCC
Confidence 346788999999999999999985 246789999998766666678899999999999 8999999999999999
Q ss_pred eeEEEEeecCCCCHHHHhccC-------------------CCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEec
Q 045127 309 TRAIVTEWTNGGNVELWLSES-------------------APSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLT 369 (508)
Q Consensus 309 ~~~lv~e~~~~gsL~~~l~~~-------------------~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~ 369 (508)
..++||||+++|+|.+++... .+++..+..++.|++.||+|||++ ||+||||||+||+++
T Consensus 101 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nil~~ 179 (313)
T 1t46_A 101 PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK-NCIHRDLAARNILLT 179 (313)
T ss_dssp SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEEE
T ss_pred CcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCccceEEEc
Confidence 999999999999999999732 389999999999999999999999 999999999999999
Q ss_pred CCCceEEeeccCCC-----------------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHH
Q 045127 370 DNLEPLISRFKIEY-----------------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFI 419 (508)
Q Consensus 370 ~~~~~kl~Dfg~~~-----------------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~ 419 (508)
.++.+||+|||.+. .++.++||||||+++|||+| |+.||....... ...
T Consensus 180 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-~~~ 258 (313)
T 1t46_A 180 HGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS-KFY 258 (313)
T ss_dssp TTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSH-HHH
T ss_pred CCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchh-HHH
Confidence 99999999998742 23457899999999999999 999997543322 111
Q ss_pred HHHHHhccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhCC
Q 045127 420 EYIRMHYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSCP 484 (508)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 484 (508)
........ ... . ......+.+++.+||+.||.+|||+.|+++.|+++.....
T Consensus 259 ~~~~~~~~--------~~~--~---~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 310 (313)
T 1t46_A 259 KMIKEGFR--------MLS--P---EHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISEST 310 (313)
T ss_dssp HHHHHTCC--------CCC--C---TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTC
T ss_pred HHhccCCC--------CCC--c---ccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHhh
Confidence 11111111 000 0 1124567789999999999999999999999999987654
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-39 Score=319.36 Aligned_cols=241 Identities=17% Similarity=0.331 Sum_probs=182.5
Q ss_pred HHHhhcCCCCCceeeecCCeEEEEEEECC-C---CEEEEEEecCCC-CHHHHHHHHHHHHHHhhcCCCCccceeeEEecC
Q 045127 233 LKAATNGFSKKNLVGKNEGAAIYKGILRD-G---TRVKIEIYKGDV-SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSR 307 (508)
Q Consensus 233 l~~~~~~~~~~~~lg~G~~g~V~~~~~~~-~---~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 307 (508)
+....++|+..+.||+|+||.||+|.+.. + ..||||+++... .....+.+.+|++++++++||||+++++++...
T Consensus 18 ~~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 97 (323)
T 3qup_A 18 VLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRS 97 (323)
T ss_dssp TBCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC
T ss_pred cccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecc
Confidence 34456789999999999999999999743 3 379999996543 234577899999999999999999999999876
Q ss_pred Cee------EEEEeecCCCCHHHHhcc-------CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCce
Q 045127 308 RTR------AIVTEWTNGGNVELWLSE-------SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEP 374 (508)
Q Consensus 308 ~~~------~lv~e~~~~gsL~~~l~~-------~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~ 374 (508)
... ++||||+++|+|.+++.. ..+++.++..++.|++.||+|||++ ||+||||||+||+++.++.+
T Consensus 98 ~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~-~ivH~Dikp~NIli~~~~~~ 176 (323)
T 3qup_A 98 RAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR-NFIHRDLAARNCMLAEDMTV 176 (323)
T ss_dssp -------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECTTSCE
T ss_pred ccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC-CcccCCCCcceEEEcCCCCE
Confidence 654 999999999999999861 2589999999999999999999999 99999999999999999999
Q ss_pred EEeeccCCC-----------------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHH
Q 045127 375 LISRFKIEY-----------------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRM 424 (508)
Q Consensus 375 kl~Dfg~~~-----------------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~ 424 (508)
||+|||.+. .++.++|||||||++|||++ |+.||....... ....+..
T Consensus 177 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~--~~~~~~~ 254 (323)
T 3qup_A 177 CVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE--IYNYLIG 254 (323)
T ss_dssp EECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--HHHHHHT
T ss_pred EEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHH--HHHHHhc
Confidence 999998752 24568899999999999999 999997543221 2211111
Q ss_pred hccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCC
Q 045127 425 HYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSCPILTSE 489 (508)
Q Consensus 425 ~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~~ 489 (508)
.. ..... ......+.+++.+||+.||++|||+.++++.|+++..........
T Consensus 255 ~~----------~~~~~---~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~~~~ 306 (323)
T 3qup_A 255 GN----------RLKQP---PECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLSTS 306 (323)
T ss_dssp TC----------CCCCC---TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-------
T ss_pred CC----------CCCCC---CccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhcCCC
Confidence 10 00001 112356788999999999999999999999999998876554443
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-38 Score=310.76 Aligned_cols=240 Identities=18% Similarity=0.279 Sum_probs=195.0
Q ss_pred cCCCCCc-eeeecCCeEEEEEEEC---CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEE
Q 045127 238 NGFSKKN-LVGKNEGAAIYKGILR---DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIV 313 (508)
Q Consensus 238 ~~~~~~~-~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 313 (508)
++|...+ .||+|+||.||+|.+. ++..||+|+++........+.+.+|++++++++||||+++++++. .+..++|
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~lv 87 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ-AEALMLV 87 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEEE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEec-CCCcEEE
Confidence 4555555 8999999999999863 578899999987666667888999999999999999999999994 5568999
Q ss_pred EeecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC--------
Q 045127 314 TEWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY-------- 383 (508)
Q Consensus 314 ~e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~-------- 383 (508)
|||+++++|.+++. ...+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||.+.
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~ 166 (287)
T 1u59_A 88 MEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK-NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSY 166 (287)
T ss_dssp EECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCE
T ss_pred EEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHC-CEeeCCCchheEEEcCCCCEEECcccceeeeccCcce
Confidence 99999999999996 45699999999999999999999999 99999999999999999999999998742
Q ss_pred ----------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhcccC
Q 045127 384 ----------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMML 440 (508)
Q Consensus 384 ----------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 440 (508)
.++.++||||||+++|||++ |+.||...... .+...+..... +..
T Consensus 167 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~~~i~~~~~--------~~~-- 234 (287)
T 1u59_A 167 YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP--EVMAFIEQGKR--------MEC-- 234 (287)
T ss_dssp ECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH--HHHHHHHTTCC--------CCC--
T ss_pred eeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH--HHHHHHhcCCc--------CCC--
Confidence 23457899999999999998 99999754321 12222211110 000
Q ss_pred CcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCCCCC
Q 045127 441 TENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSCPILTSENHRKS 494 (508)
Q Consensus 441 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~~~~~~~ 494 (508)
. ......+.+++.+||+.||++|||+.|+++.|+.+..+...........+
T Consensus 235 ~---~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~~~~~~~~~ 285 (287)
T 1u59_A 235 P---PECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKVEGHHHHH 285 (287)
T ss_dssp C---TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHTTCSSCCCTT
T ss_pred C---CCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCCcccCCcccc
Confidence 0 11245677899999999999999999999999999888776665544433
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-38 Score=307.79 Aligned_cols=229 Identities=18% Similarity=0.306 Sum_probs=186.5
Q ss_pred hcCCCCCceeeecCCeEEEEEEECCCCEEEEEEecCCC-CHHHHHHHHHHHHHHhhcCCCCccceeeEEecC--CeeEEE
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDV-SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSR--RTRAIV 313 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~lv 313 (508)
.++|+..+.||+|+||.||+|.+. ++.||||+++... .....+.+.+|+.++++++||||+++++++.+. ...++|
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLI 87 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEE
T ss_pred HHHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEee
Confidence 457889999999999999999985 8899999997543 345567899999999999999999999999876 778999
Q ss_pred EeecCCCCHHHHhccC---CCCHHHHHHHHHHHHHHHHHHhhCCC--ccccCCCCCCEEecCCCceEEeeccCCCC----
Q 045127 314 TEWTNGGNVELWLSES---APSWKHRLKVLIGVVEAMCYLQEQWP--EVDYDLRTGSVLLTDNLEPLISRFKIEYQ---- 384 (508)
Q Consensus 314 ~e~~~~gsL~~~l~~~---~l~~~~~~~i~~~i~~~L~~LH~~~~--iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~---- 384 (508)
|||+++|+|.+++... .+++..+..++.|++.||+|||++ + ++||||||+||+++.++.++++|||++..
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~~ 166 (271)
T 3kmu_A 88 THWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTL-EPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSP 166 (271)
T ss_dssp EECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTS-SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSCT
T ss_pred ecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC-CCceecCCCccceEEEcCCcceeEEeccceeeeccc
Confidence 9999999999999833 489999999999999999999999 9 99999999999999999999998876421
Q ss_pred ------------------CCC---cchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcc
Q 045127 385 ------------------HRS---TKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTEN 443 (508)
Q Consensus 385 ------------------~~~---~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 443 (508)
.+. ++||||||+++|||++|+.||........ ......... .+.+.
T Consensus 167 ~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-~~~~~~~~~--------~~~~~---- 233 (271)
T 3kmu_A 167 GRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEI-GMKVALEGL--------RPTIP---- 233 (271)
T ss_dssp TCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHH-HHHHHHSCC--------CCCCC----
T ss_pred CccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHH-HHHHHhcCC--------CCCCC----
Confidence 122 69999999999999999999975432111 011111100 01110
Q ss_pred hHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHh
Q 045127 444 MFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYK 481 (508)
Q Consensus 444 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~ 481 (508)
......+.+++.+||+.||++|||++|+++.|+++.+
T Consensus 234 -~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 234 -PGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp -TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred -CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 1123457789999999999999999999999998864
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-39 Score=320.90 Aligned_cols=228 Identities=16% Similarity=0.240 Sum_probs=181.6
Q ss_pred hcCCCCCceeeecCCeEEEEEEEC-CCC----EEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeE
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGILR-DGT----RVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRA 311 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 311 (508)
.++|+..+.||+|+||.||+|.+. +++ .||+|.++........+.+.+|+.++++++||||+++++++..+. .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~ 92 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EE
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eE
Confidence 357889999999999999999973 444 368888865554456788999999999999999999999998765 78
Q ss_pred EEEeecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC-------
Q 045127 312 IVTEWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE------- 382 (508)
Q Consensus 312 lv~e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~------- 382 (508)
+||||+++|+|.+++. ...+++..+..|+.|++.||+|||++ ||+||||||+||+++.++.+||+|||++
T Consensus 93 ~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~-~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~ 171 (327)
T 3poz_A 93 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 171 (327)
T ss_dssp EEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTC
T ss_pred EEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhC-CeeCCCCChheEEECCCCCEEEccCcceeEccCCc
Confidence 8999999999999997 46799999999999999999999999 9999999999999999999999999863
Q ss_pred ----------------------CCCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhccc
Q 045127 383 ----------------------YQHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMM 439 (508)
Q Consensus 383 ----------------------~~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 439 (508)
..++.++|||||||++|||+| |+.||....... +...+..... ..
T Consensus 172 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--~~~~~~~~~~----------~~ 239 (327)
T 3poz_A 172 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE--ISSILEKGER----------LP 239 (327)
T ss_dssp C-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--HHHHHHTTCC----------CC
T ss_pred ccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHH--HHHHHHcCCC----------CC
Confidence 134668999999999999999 999997543222 2222221110 00
Q ss_pred CCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHh
Q 045127 440 LTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYK 481 (508)
Q Consensus 440 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~ 481 (508)
.. ......+.+++.+||+.||.+|||+.|+++.|+++..
T Consensus 240 ~~---~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~ 278 (327)
T 3poz_A 240 QP---PICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp CC---TTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHT
T ss_pred CC---ccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 01 1124467789999999999999999999999998865
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-39 Score=335.28 Aligned_cols=232 Identities=18% Similarity=0.325 Sum_probs=191.4
Q ss_pred HHhhcCCCCCceeeecCCeEEEEEEECCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEE
Q 045127 234 KAATNGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIV 313 (508)
Q Consensus 234 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 313 (508)
+...++|+..+.||+|+||.||+|.+.++..||||+++.... ..+.+.+|+.++++++||||+++++++. .+..++|
T Consensus 184 ~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv 260 (454)
T 1qcf_A 184 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSM--SVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYII 260 (454)
T ss_dssp BCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTSB--CHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEE
T ss_pred eechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCCc--cHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEE
Confidence 345577888999999999999999998889999999975432 3678999999999999999999999986 5678999
Q ss_pred EeecCCCCHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-------
Q 045127 314 TEWTNGGNVELWLSE---SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------- 383 (508)
Q Consensus 314 ~e~~~~gsL~~~l~~---~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------- 383 (508)
|||+++|+|.+++.. ..+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||++.
T Consensus 261 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~-~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~ 339 (454)
T 1qcf_A 261 TEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR-NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEY 339 (454)
T ss_dssp ECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHT-TCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHH
T ss_pred EeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC-CccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCce
Confidence 999999999999972 3789999999999999999999999 99999999999999999999999998752
Q ss_pred ---------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCC
Q 045127 384 ---------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLT 441 (508)
Q Consensus 384 ---------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 441 (508)
.++.++|||||||++|||+| |+.||...... .+...+.... .+...
T Consensus 340 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~--~~~~~i~~~~----------~~~~~ 407 (454)
T 1qcf_A 340 TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP--EVIRALERGY----------RMPRP 407 (454)
T ss_dssp HTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--HHHHHHHHTC----------CCCCC
T ss_pred eccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCC----------CCCCC
Confidence 24567899999999999999 99999754321 1111111111 01111
Q ss_pred cchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhCC
Q 045127 442 ENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSCP 484 (508)
Q Consensus 442 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 484 (508)
......+.+++.+||+.||++|||+++|++.|+++.....
T Consensus 408 ---~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~~~ 447 (454)
T 1qcf_A 408 ---ENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTATE 447 (454)
T ss_dssp ---TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSSSC
T ss_pred ---CCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhccc
Confidence 1224567889999999999999999999999998865543
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-38 Score=306.98 Aligned_cols=228 Identities=18% Similarity=0.285 Sum_probs=189.5
Q ss_pred hcCCCCCceeeecCCeEEEEEEECCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEee
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEW 316 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 316 (508)
.++|+..+.||+|+||.||+|.+.+++.||+|++...... .+.+.+|++++++++||||+++++++..++..++||||
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~--~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS--EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEF 84 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTBC--HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECC
T ss_pred hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCCC--HHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeC
Confidence 3578888999999999999999988889999999754432 46789999999999999999999999999999999999
Q ss_pred cCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-----------
Q 045127 317 TNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY----------- 383 (508)
Q Consensus 317 ~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~----------- 383 (508)
+++++|.+++. ...+++..+..++.|++.||+|||++ |++||||||+||+++.++.+||+|||.+.
T Consensus 85 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~ 163 (267)
T 3t9t_A 85 MEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA-CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST 163 (267)
T ss_dssp CTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTT
T ss_pred CCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCchheEEECCCCCEEEcccccccccccccccccc
Confidence 99999999998 35689999999999999999999999 99999999999999999999999998642
Q ss_pred -----------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchH
Q 045127 384 -----------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMF 445 (508)
Q Consensus 384 -----------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 445 (508)
.++.++||||||+++|||++ |+.||...... .....+..... ... . .
T Consensus 164 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~~i~~~~~--------~~~--~---~ 228 (267)
T 3t9t_A 164 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS--EVVEDISTGFR--------LYK--P---R 228 (267)
T ss_dssp STTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHHHHTTCC--------CCC--C---T
T ss_pred cccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHH--HHHHHHhcCCc--------CCC--C---c
Confidence 23557899999999999999 89999753211 11111111110 000 0 0
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhh
Q 045127 446 DQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKS 482 (508)
Q Consensus 446 ~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 482 (508)
.....+.+++.+||+.||++|||+.|+++.|+++.++
T Consensus 229 ~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (267)
T 3t9t_A 229 LASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265 (267)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred cCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 1234577899999999999999999999999999875
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-39 Score=310.42 Aligned_cols=227 Identities=18% Similarity=0.268 Sum_probs=180.6
Q ss_pred hcCCCCCceeeecCCeEEEEEEECCCCEEEEEEecCCCCH---HHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEE
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSR---EIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIV 313 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 313 (508)
.++|+..+.||+|+||.||+|.+. ++.||||+++..... ...+.+.+|+++++.++||||+++++++..++..++|
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 467888999999999999999985 889999998644322 2356789999999999999999999999999999999
Q ss_pred EeecCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCC---ccccCCCCCCEEecC--------CCceEEeeccCC
Q 045127 314 TEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWP---EVDYDLRTGSVLLTD--------NLEPLISRFKIE 382 (508)
Q Consensus 314 ~e~~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~---iiH~Dlkp~NIll~~--------~~~~kl~Dfg~~ 382 (508)
|||+++++|.+++....+++..+..++.|++.||+|||++ | |+||||||+||+++. ++.+||+|||.+
T Consensus 85 ~e~~~~~~L~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~-~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~ 163 (271)
T 3dtc_A 85 MEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDE-AIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLA 163 (271)
T ss_dssp EECCTTEEHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHS-SSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC-
T ss_pred EEcCCCCCHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC-CCCceeecCCchHHEEEecccccccccCcceEEccCCcc
Confidence 9999999999999988999999999999999999999999 8 899999999999986 778999999875
Q ss_pred C-------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhc
Q 045127 383 Y-------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDER 437 (508)
Q Consensus 383 ~-------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (508)
. .++.++||||||+++|||++|+.||....... . ......... ...
T Consensus 164 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--~---~~~~~~~~~----~~~ 234 (271)
T 3dtc_A 164 REWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLA--V---AYGVAMNKL----ALP 234 (271)
T ss_dssp ------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHH--H---HHHHHTSCC----CCC
T ss_pred cccccccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--H---HHhhhcCCC----CCC
Confidence 3 24567899999999999999999997533211 0 000000000 000
Q ss_pred ccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHH
Q 045127 438 MMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRA 479 (508)
Q Consensus 438 l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i 479 (508)
. . ......+.+++.+||+.||++|||+.|+++.|+++
T Consensus 235 ~--~---~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 235 I--P---STCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp C--C---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred C--C---cccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 0 0 11235677899999999999999999999999864
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-39 Score=325.02 Aligned_cols=231 Identities=19% Similarity=0.253 Sum_probs=189.5
Q ss_pred hcCCCCCceeeecCCeEEEEEEEC------CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCee
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGILR------DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTR 310 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 310 (508)
.++|+..+.||+|+||.||+|.+. +++.||||+++..........+.+|+.++++++||||+++++++......
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 149 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 149 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 357888999999999999999953 46689999997766666777899999999999999999999999999999
Q ss_pred EEEEeecCCCCHHHHhcc--------CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCC---ceEEeec
Q 045127 311 AIVTEWTNGGNVELWLSE--------SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNL---EPLISRF 379 (508)
Q Consensus 311 ~lv~e~~~~gsL~~~l~~--------~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~---~~kl~Df 379 (508)
++||||+++|+|.+++.. ..+++.++..++.||+.||+|||++ ||+||||||+|||++.++ .+||+||
T Consensus 150 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~~~~~~~kL~DF 228 (367)
T 3l9p_A 150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN-HFIHRDIAARNCLLTCPGPGRVAKIGDF 228 (367)
T ss_dssp EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEESCSSTTCCEEECCC
T ss_pred EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC-CeeCCCCChhhEEEecCCCCceEEECCC
Confidence 999999999999999972 3589999999999999999999999 999999999999999554 5999999
Q ss_pred cCC-----------------------------CCCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccch
Q 045127 380 KIE-----------------------------YQHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPEN 429 (508)
Q Consensus 380 g~~-----------------------------~~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~ 429 (508)
|++ ..++.++|||||||++|||++ |+.||...... .+...+.....
T Consensus 229 G~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~--~~~~~i~~~~~-- 304 (367)
T 3l9p_A 229 GMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ--EVLEFVTSGGR-- 304 (367)
T ss_dssp HHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--HHHHHHHTTCC--
T ss_pred ccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCCC--
Confidence 864 134668999999999999998 99999753221 11111111110
Q ss_pred hhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhC
Q 045127 430 LQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSC 483 (508)
Q Consensus 430 ~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 483 (508)
.... ......+.+++.+||+.||.+|||+.||++.|+.+....
T Consensus 305 --------~~~~---~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~ 347 (367)
T 3l9p_A 305 --------MDPP---KNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 347 (367)
T ss_dssp --------CCCC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred --------CCCC---ccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhCh
Confidence 0000 112345778999999999999999999999999887643
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-38 Score=308.04 Aligned_cols=233 Identities=15% Similarity=0.209 Sum_probs=187.9
Q ss_pred CCCCCceeeecCCeEEEEEEEC-CC---CEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCee-EEE
Q 045127 239 GFSKKNLVGKNEGAAIYKGILR-DG---TRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTR-AIV 313 (508)
Q Consensus 239 ~~~~~~~lg~G~~g~V~~~~~~-~~---~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~-~lv 313 (508)
.|...+.||+|+||.||+|.+. ++ ..||+|.+.........+.+.+|+.++++++||||+++++++.+.+.. ++|
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 101 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL 101 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence 4556689999999999999863 23 379999998766666778899999999999999999999999876555 999
Q ss_pred EeecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC--------
Q 045127 314 TEWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY-------- 383 (508)
Q Consensus 314 ~e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~-------- 383 (508)
|||+.+|+|.+++. ...+++..+..++.|++.||+|||++ |++||||||+||+++.++.+||+|||.+.
T Consensus 102 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~-~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~ 180 (298)
T 3pls_A 102 LPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQ-KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYY 180 (298)
T ss_dssp ECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGGG
T ss_pred EecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCcceEEEcCCCcEEeCcCCCcccccCCccc
Confidence 99999999999998 46789999999999999999999999 99999999999999999999999999763
Q ss_pred -----------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccC
Q 045127 384 -----------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMML 440 (508)
Q Consensus 384 -----------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 440 (508)
.++.++||||||+++|||++|..|+..... ...+...+...... ..
T Consensus 181 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~-~~~~~~~~~~~~~~----------~~ 249 (298)
T 3pls_A 181 SVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHID-PFDLTHFLAQGRRL----------PQ 249 (298)
T ss_dssp CSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC-GGGHHHHHHTTCCC----------CC
T ss_pred ccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCC-HHHHHHHhhcCCCC----------CC
Confidence 235678999999999999996655432221 11222222221110 00
Q ss_pred CcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhCCCC
Q 045127 441 TENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSCPIL 486 (508)
Q Consensus 441 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~ 486 (508)
. ......+.+++.+||+.||.+|||+.++++.|+++.+.....
T Consensus 250 ~---~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~~~ 292 (298)
T 3pls_A 250 P---EYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLGD 292 (298)
T ss_dssp C---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCCSC
T ss_pred C---ccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHhcc
Confidence 0 112346778999999999999999999999999998886543
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-38 Score=311.44 Aligned_cols=231 Identities=19% Similarity=0.287 Sum_probs=186.5
Q ss_pred cCCCCCceeeecCCeEEEEEEECCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEeec
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWT 317 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 317 (508)
++|+..+.||+|+||.||+|.+. ++.||+|.+... ...+.+.+|++++++++||||+++++++.+ ..++||||+
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~~ 81 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE---SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYA 81 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST---THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEECC
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh---hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEcC
Confidence 56888899999999999999985 788999999543 245789999999999999999999998874 479999999
Q ss_pred CCCCHHHHhccC----CCCHHHHHHHHHHHHHHHHHHhh---CCCccccCCCCCCEEecCCCc-eEEeeccCC-------
Q 045127 318 NGGNVELWLSES----APSWKHRLKVLIGVVEAMCYLQE---QWPEVDYDLRTGSVLLTDNLE-PLISRFKIE------- 382 (508)
Q Consensus 318 ~~gsL~~~l~~~----~l~~~~~~~i~~~i~~~L~~LH~---~~~iiH~Dlkp~NIll~~~~~-~kl~Dfg~~------- 382 (508)
++|+|.+++... .+++..+..++.|+++||+|||+ + ||+||||||+||+++.++. +||+|||.+
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~-~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~ 160 (307)
T 2eva_A 82 EGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPK-ALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHM 160 (307)
T ss_dssp TTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSS-CCCCCCCSGGGEEEETTTTEEEECCCCC--------
T ss_pred CCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCC-CeecCCCChhHEEEeCCCCEEEEccccccccccccc
Confidence 999999999832 47899999999999999999999 7 9999999999999998886 799999874
Q ss_pred -----------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchH
Q 045127 383 -----------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMF 445 (508)
Q Consensus 383 -----------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 445 (508)
..++.++||||||+++|||++|+.||................... +... .
T Consensus 161 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~--------~~~~-----~ 227 (307)
T 2eva_A 161 TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTR--------PPLI-----K 227 (307)
T ss_dssp ----CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCC--------CCCB-----T
T ss_pred ccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCC--------CCcc-----c
Confidence 245678999999999999999999997543322111111111100 0000 1
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhCCCCCC
Q 045127 446 DQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSCPILTS 488 (508)
Q Consensus 446 ~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~ 488 (508)
.....+.+++.+||+.||++|||++|+++.|+.+.+..+....
T Consensus 228 ~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~~~~ 270 (307)
T 2eva_A 228 NLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGADE 270 (307)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCCCTTS
T ss_pred ccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhccCCCC
Confidence 1234577899999999999999999999999999887765544
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-38 Score=316.90 Aligned_cols=224 Identities=11% Similarity=0.102 Sum_probs=183.5
Q ss_pred hhcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEE
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVT 314 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 314 (508)
..++|+..+.||+|+||.||+|... +++.||+|.+... ......+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 3 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~ 80 (321)
T 1tki_A 3 LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK--GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIF 80 (321)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC--THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC--cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEE
Confidence 3578999999999999999999974 6889999999643 234567899999999999999999999999999999999
Q ss_pred eecCCCCHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecC--CCceEEeeccCCC-------
Q 045127 315 EWTNGGNVELWLSE--SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTD--NLEPLISRFKIEY------- 383 (508)
Q Consensus 315 e~~~~gsL~~~l~~--~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~--~~~~kl~Dfg~~~------- 383 (508)
||+++|+|.+++.. ..+++.++..++.|++.||+|||++ ||+||||||+||+++. ++.+||+|||.+.
T Consensus 81 e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~-givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~ 159 (321)
T 1tki_A 81 EFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH-NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDN 159 (321)
T ss_dssp CCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCE
T ss_pred EeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCc
Confidence 99999999999973 4699999999999999999999999 9999999999999997 7899999999752
Q ss_pred -------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcc-
Q 045127 384 -------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTEN- 443 (508)
Q Consensus 384 -------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~- 443 (508)
.++.++|||||||++|||++|+.||...... .....+.. ........
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~~~i~~-----------~~~~~~~~~ 226 (321)
T 1tki_A 160 FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ--QIIENIMN-----------AEYTFDEEA 226 (321)
T ss_dssp EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHHHHHH-----------TCCCCCHHH
T ss_pred cccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHH--HHHHHHHc-----------CCCCCChhh
Confidence 2356899999999999999999999753221 11111111 11100000
Q ss_pred hHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 444 MFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 444 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
.......+.+++.+||+.||.+|||+.|+++.
T Consensus 227 ~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~h 258 (321)
T 1tki_A 227 FKEISIEAMDFVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp HTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred hccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 00124567789999999999999999999974
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-38 Score=319.87 Aligned_cols=234 Identities=17% Similarity=0.252 Sum_probs=186.7
Q ss_pred hhcCCCCCceeeecCCeEEEEEEE------CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhc-CCCCccceeeEEecCC
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGIL------RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQF-QHKNLIRVLGWNNSRR 308 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 308 (508)
..++|+..+.||+|+||.||+|.+ .++..||+|++.........+.+.+|+.+++++ +||||+++++++...+
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 122 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG 122 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC
Confidence 457889999999999999999996 235689999997654445567899999999999 8999999999999999
Q ss_pred eeEEEEeecCCCCHHHHhccC------------------------CCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCC
Q 045127 309 TRAIVTEWTNGGNVELWLSES------------------------APSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTG 364 (508)
Q Consensus 309 ~~~lv~e~~~~gsL~~~l~~~------------------------~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~ 364 (508)
..++||||+++|+|.+++... .+++..+..++.|++.||+|||++ ||+||||||+
T Consensus 123 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dikp~ 201 (344)
T 1rjb_A 123 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK-SCVHRDLAAR 201 (344)
T ss_dssp SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT-TEEETTCSGG
T ss_pred ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCChh
Confidence 999999999999999999732 378999999999999999999999 9999999999
Q ss_pred CEEecCCCceEEeeccCCC-----------------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccC
Q 045127 365 SVLLTDNLEPLISRFKIEY-----------------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERG 414 (508)
Q Consensus 365 NIll~~~~~~kl~Dfg~~~-----------------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~ 414 (508)
||+++.++.+||+|||.+. .++.++||||||+++|||+| |+.||......
T Consensus 202 NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~ 281 (344)
T 1rjb_A 202 NVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVD 281 (344)
T ss_dssp GEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS
T ss_pred hEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcH
Confidence 9999999999999998752 24567899999999999998 99999764432
Q ss_pred cccHHHHHHHhccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhCC
Q 045127 415 EAGFIEYIRMHYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSCP 484 (508)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 484 (508)
. .+...+...... .. . ......+.+++.+||+.||.+|||+.|+++.|+.+.....
T Consensus 282 ~-~~~~~~~~~~~~--------~~--~---~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~ 337 (344)
T 1rjb_A 282 A-NFYKLIQNGFKM--------DQ--P---FYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAE 337 (344)
T ss_dssp H-HHHHHHHTTCCC--------CC--C---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC----
T ss_pred H-HHHHHHhcCCCC--------CC--C---CCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHHH
Confidence 2 122222211110 00 0 1124567789999999999999999999999999876544
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-38 Score=328.10 Aligned_cols=227 Identities=22% Similarity=0.332 Sum_probs=188.8
Q ss_pred hhcCCCCCceeeecCCeEEEEEEECCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCC-eeEEEE
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRR-TRAIVT 314 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~lv~ 314 (508)
..++|+..+.||+|+||.||+|.+. ++.||||+++... ..+.+.+|+.++++++||||+++++++.... ..++||
T Consensus 191 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~ 266 (450)
T 1k9a_A 191 NMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA---TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 266 (450)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT---TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEE
T ss_pred ChHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch---HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEE
Confidence 3467888999999999999999985 7899999997543 3567999999999999999999999987655 789999
Q ss_pred eecCCCCHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC---------
Q 045127 315 EWTNGGNVELWLSE---SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE--------- 382 (508)
Q Consensus 315 e~~~~gsL~~~l~~---~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~--------- 382 (508)
||+++|+|.+++.. ..+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||++
T Consensus 267 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~-~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 345 (450)
T 1k9a_A 267 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN-NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDT 345 (450)
T ss_dssp ECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred EecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCCHhhEEECCCCCEEEeeCCCcccccccccC
Confidence 99999999999982 2379999999999999999999999 9999999999999999999999999874
Q ss_pred ---------------CCCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHH
Q 045127 383 ---------------YQHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFD 446 (508)
Q Consensus 383 ---------------~~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 446 (508)
..++.++|||||||++|||++ |+.||....... ....+..... +... ..
T Consensus 346 ~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~--~~~~i~~~~~----------~~~p---~~ 410 (450)
T 1k9a_A 346 GKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD--VVPRVEKGYK----------MDAP---DG 410 (450)
T ss_dssp -CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTT--HHHHHHTTCC----------CCCC---TT
T ss_pred CCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHcCCC----------CCCC---Cc
Confidence 234668999999999999998 999997654322 2222221111 1111 12
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhh
Q 045127 447 QAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKS 482 (508)
Q Consensus 447 ~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 482 (508)
....+.+++.+||+.||++|||+.++++.|+++...
T Consensus 411 ~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 411 CPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence 245677899999999999999999999999998765
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-38 Score=315.69 Aligned_cols=234 Identities=17% Similarity=0.254 Sum_probs=191.7
Q ss_pred hhcCCCCCceeeecCCeEEEEEEEC--------CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhc-CCCCccceeeEEec
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGILR--------DGTRVKIEIYKGDVSREIRDEFVEECKLLVQF-QHKNLIRVLGWNNS 306 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~ 306 (508)
..++|+..+.||+|+||.||+|.+. ++..||+|+++........+.+.+|+.+++++ +||||+++++++..
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 112 (334)
T 2pvf_A 33 PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 112 (334)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred CHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc
Confidence 3468899999999999999999863 46789999998766666778899999999999 89999999999999
Q ss_pred CCeeEEEEeecCCCCHHHHhccC-----------------CCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEec
Q 045127 307 RRTRAIVTEWTNGGNVELWLSES-----------------APSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLT 369 (508)
Q Consensus 307 ~~~~~lv~e~~~~gsL~~~l~~~-----------------~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~ 369 (508)
.+..++||||+++|+|.+++... .+++.++..++.|++.||+|||++ ||+||||||+||+++
T Consensus 113 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~ 191 (334)
T 2pvf_A 113 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ-KCIHRDLAARNVLVT 191 (334)
T ss_dssp SSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEC
T ss_pred CCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCccceEEEc
Confidence 99999999999999999999732 389999999999999999999999 999999999999999
Q ss_pred CCCceEEeeccCCC-----------------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHH
Q 045127 370 DNLEPLISRFKIEY-----------------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFI 419 (508)
Q Consensus 370 ~~~~~kl~Dfg~~~-----------------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~ 419 (508)
.++.+||+|||.+. .++.++||||||+++|||++ |+.||...... .+.
T Consensus 192 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~ 269 (334)
T 2pvf_A 192 ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE--ELF 269 (334)
T ss_dssp TTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--HHH
T ss_pred CCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHH--HHH
Confidence 99999999998742 23457899999999999999 99999753221 111
Q ss_pred HHHHHhccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhCCC
Q 045127 420 EYIRMHYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSCPI 485 (508)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~ 485 (508)
..+..... ... . ......+.+++.+||+.||.+|||+.|+++.|+++......
T Consensus 270 ~~~~~~~~--------~~~--~---~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~~~ 322 (334)
T 2pvf_A 270 KLLKEGHR--------MDK--P---ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 322 (334)
T ss_dssp HHHHHTCC--------CCC--C---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred HHHhcCCC--------CCC--C---ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcccc
Confidence 11111110 000 0 11234677899999999999999999999999999875443
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-38 Score=316.91 Aligned_cols=233 Identities=13% Similarity=0.114 Sum_probs=187.3
Q ss_pred hcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhc-CCCCccceeeEEecCCeeEEEE
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQF-QHKNLIRVLGWNNSRRTRAIVT 314 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~ 314 (508)
.++|+..+.||+|+||.||+|.. .+++.||||++..... .+.+.+|+++++++ +||||+++++++..+...++||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~ 84 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR---APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVL 84 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS---SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc---hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEE
Confidence 46789999999999999999997 5789999999864432 24688999999999 8999999999999999999999
Q ss_pred eecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCc-----eEEeeccCCC----
Q 045127 315 EWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLE-----PLISRFKIEY---- 383 (508)
Q Consensus 315 e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~-----~kl~Dfg~~~---- 383 (508)
||+ +++|.+++. ...+++..+..++.|++.||+|||++ ||+||||||+||+++.++. +||+|||++.
T Consensus 85 e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~-~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~ 162 (330)
T 2izr_A 85 ELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSK-NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYID 162 (330)
T ss_dssp ECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBC
T ss_pred EeC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeec
Confidence 999 999999998 57899999999999999999999999 9999999999999998887 9999998753
Q ss_pred ------------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhh
Q 045127 384 ------------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLV 433 (508)
Q Consensus 384 ------------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (508)
.++.++|||||||++|||++|+.||....... ...............
T Consensus 163 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~--~~~~~~~i~~~~~~~- 239 (330)
T 2izr_A 163 PETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADT--LKERYQKIGDTKRAT- 239 (330)
T ss_dssp TTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSS--HHHHHHHHHHHHHHS-
T ss_pred CCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCcccccccc--HHHHHHHHHhhhccC-
Confidence 13457899999999999999999998654222 111111110000000
Q ss_pred hhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhC
Q 045127 434 VDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSC 483 (508)
Q Consensus 434 ~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 483 (508)
....+ .. ... .+.+++..||+.||.+||++++|.+.|+++....
T Consensus 240 ~~~~~--~~---~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~ 283 (330)
T 2izr_A 240 PIEVL--CE---NFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRK 283 (330)
T ss_dssp CHHHH--TT---TCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred CHHHH--hc---cCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHc
Confidence 00000 00 012 7888999999999999999999999999987764
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-38 Score=311.18 Aligned_cols=233 Identities=19% Similarity=0.311 Sum_probs=183.6
Q ss_pred HhhcCCCCCceeeecCCeEEEEEEECCCCEEEEEEecCCC-CHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEE
Q 045127 235 AATNGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDV-SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIV 313 (508)
Q Consensus 235 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 313 (508)
...++|+..+.||+|+||.||+|.+. ..||+|+++... .....+.+.+|+.++++++||||++++++. .....++|
T Consensus 21 i~~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv 97 (289)
T 3og7_A 21 IPDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIV 97 (289)
T ss_dssp CCTTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEE
T ss_pred cCccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEE
Confidence 34568999999999999999999864 369999997543 345577899999999999999999999965 45568999
Q ss_pred EeecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC--------
Q 045127 314 TEWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY-------- 383 (508)
Q Consensus 314 ~e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~-------- 383 (508)
|||+++++|.+++. ...+++.++..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||.+.
T Consensus 98 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~-~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 176 (289)
T 3og7_A 98 TQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAK-SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGS 176 (289)
T ss_dssp EECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEEETTTEEEECCCC-----------
T ss_pred EEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC-CcccccCccceEEECCCCCEEEccceecccccccccc
Confidence 99999999999996 56789999999999999999999999 99999999999999999999999998642
Q ss_pred ------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhccc
Q 045127 384 ------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMM 439 (508)
Q Consensus 384 ------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 439 (508)
.++.++||||||+++|||++|+.||....... .+...+..... .+.+.
T Consensus 177 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-~~~~~~~~~~~-------~~~~~ 248 (289)
T 3og7_A 177 HQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD-QIIEMVGRGSL-------SPDLS 248 (289)
T ss_dssp -------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHH-HHHHHHHHTSC-------CCCTT
T ss_pred ccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHH-HHHHHhccccc-------Ccchh
Confidence 23447899999999999999999997543222 12222211110 01110
Q ss_pred CCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHh
Q 045127 440 LTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYK 481 (508)
Q Consensus 440 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~ 481 (508)
.. .......+.+++.+||+.||++|||+.|+++.|+++.+
T Consensus 249 ~~--~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 249 KV--RSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp SS--CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred hc--cccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 00 01224567889999999999999999999999998764
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-38 Score=322.98 Aligned_cols=239 Identities=14% Similarity=0.155 Sum_probs=186.1
Q ss_pred HhhcCCCCCceeeec--CCeEEEEEEEC-CCCEEEEEEecCCC-CHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCee
Q 045127 235 AATNGFSKKNLVGKN--EGAAIYKGILR-DGTRVKIEIYKGDV-SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTR 310 (508)
Q Consensus 235 ~~~~~~~~~~~lg~G--~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 310 (508)
...++|+..+.||+| +||.||+|+.. +++.||||++.... .....+.+.+|+.++++++||||+++++++.+++..
T Consensus 22 ~~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 101 (389)
T 3gni_B 22 PEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNEL 101 (389)
T ss_dssp CCGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEE
T ss_pred CCCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEE
Confidence 345789999999999 99999999985 69999999997443 334567888999999999999999999999999999
Q ss_pred EEEEeecCCCCHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC-----
Q 045127 311 AIVTEWTNGGNVELWLS---ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE----- 382 (508)
Q Consensus 311 ~lv~e~~~~gsL~~~l~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~----- 382 (508)
++||||+++|+|.+++. ...+++..+..++.||+.||+|||++ ||+||||||+|||++.++.+||+|||.+
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~-~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~ 180 (389)
T 3gni_B 102 WVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHM-GYVHRSVKASHILISVDGKVYLSGLRSNLSMIS 180 (389)
T ss_dssp EEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTCCEEECCGGGCEECEE
T ss_pred EEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEcCCCCEEEcccccceeecc
Confidence 99999999999999997 36799999999999999999999999 9999999999999999999999999752
Q ss_pred -------------------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccch--
Q 045127 383 -------------------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPEN-- 429 (508)
Q Consensus 383 -------------------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~-- 429 (508)
..++.++|||||||++|||++|+.||........ +........+..
T Consensus 181 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~ 259 (389)
T 3gni_B 181 HGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQM-LLEKLNGTVPCLLD 259 (389)
T ss_dssp TTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTH-HHHC----------
T ss_pred ccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHH-HHHHhcCCCCcccc
Confidence 2467789999999999999999999976443221 111110000000
Q ss_pred ---------------------hhhhhhh---c-----ccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 430 ---------------------LQLVVDE---R-----MMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 430 ---------------------~~~~~~~---~-----l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
..+.... . .............+.+++.+||+.||++|||+.|+++.
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h 334 (389)
T 3gni_B 260 TSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 334 (389)
T ss_dssp ----------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred ccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence 0000000 0 00000011124568889999999999999999999864
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-38 Score=331.98 Aligned_cols=231 Identities=19% Similarity=0.311 Sum_probs=190.4
Q ss_pred HhhcCCCCCceeeecCCeEEEEEEECCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEE
Q 045127 235 AATNGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVT 314 (508)
Q Consensus 235 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 314 (508)
...++|+..+.||+|+||.||+|.+.++..||||+++.... ..+.+.+|++++++++||||+++++++.. +..++||
T Consensus 181 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~ 257 (452)
T 1fmk_A 181 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM--SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 257 (452)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSS--CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEE
T ss_pred cChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCC--CHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEe
Confidence 34567888999999999999999998788899999975432 34679999999999999999999999876 6689999
Q ss_pred eecCCCCHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC--------
Q 045127 315 EWTNGGNVELWLS---ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY-------- 383 (508)
Q Consensus 315 e~~~~gsL~~~l~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~-------- 383 (508)
||+++|+|.+++. ...+++.++..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||++.
T Consensus 258 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~-~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 336 (452)
T 1fmk_A 258 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM-NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 336 (452)
T ss_dssp CCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECGGGCEEECCCCTTC--------
T ss_pred hhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCChhhEEECCCCCEEECCCccceecCCCcee
Confidence 9999999999997 35699999999999999999999999 99999999999999999999999999853
Q ss_pred --------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCc
Q 045127 384 --------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTE 442 (508)
Q Consensus 384 --------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 442 (508)
.++.++|||||||++|||++ |+.||......+ +...+.... .+...
T Consensus 337 ~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~--~~~~i~~~~----------~~~~~- 403 (452)
T 1fmk_A 337 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE--VLDQVERGY----------RMPCP- 403 (452)
T ss_dssp ------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH--HHHHHHTTC----------CCCCC-
T ss_pred cccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHcCC----------CCCCC-
Confidence 23557899999999999999 999997543211 111111111 01101
Q ss_pred chHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhCC
Q 045127 443 NMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSCP 484 (508)
Q Consensus 443 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 484 (508)
......+.+++.+||+.||++|||++++++.|+++.....
T Consensus 404 --~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~~ 443 (452)
T 1fmk_A 404 --PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE 443 (452)
T ss_dssp --TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSC
T ss_pred --CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccCC
Confidence 1224567789999999999999999999999998876544
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-38 Score=308.83 Aligned_cols=235 Identities=11% Similarity=0.107 Sum_probs=188.9
Q ss_pred hhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhc-CCCCccceeeEEecCCeeEEE
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQF-QHKNLIRVLGWNNSRRTRAIV 313 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv 313 (508)
..++|+..+.||+|+||.||+|.. .+++.||+|++..... .+.+.+|+.+++++ +|+|++++++++......++|
T Consensus 8 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 84 (298)
T 1csn_A 8 VGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD---APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLV 84 (298)
T ss_dssp ETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT---SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEE
T ss_pred cccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc---cHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEE
Confidence 346799999999999999999997 5789999999864432 34578899999999 799999999999999999999
Q ss_pred EeecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCc-----eEEeeccCCC---
Q 045127 314 TEWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLE-----PLISRFKIEY--- 383 (508)
Q Consensus 314 ~e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~-----~kl~Dfg~~~--- 383 (508)
|||+ +++|.+++. ...+++..+..++.|++.||+|||++ ||+||||||+||+++.++. +||+|||.+.
T Consensus 85 ~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~ 162 (298)
T 1csn_A 85 IDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEK-SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYR 162 (298)
T ss_dssp EECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTT-TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESB
T ss_pred EEec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhC-CEecCCCCHHHEEeccCCCCCCCeEEEEECccccccc
Confidence 9999 999999998 45699999999999999999999999 9999999999999987776 9999998742
Q ss_pred -------------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcc-cHHHHHHH-hccchh
Q 045127 384 -------------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEA-GFIEYIRM-HYPENL 430 (508)
Q Consensus 384 -------------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~-~~~~~~~~-~~~~~~ 430 (508)
.++.++||||||+++|||++|+.||........ .....+.. ......
T Consensus 163 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 242 (298)
T 1csn_A 163 DPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPL 242 (298)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCH
T ss_pred cccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCccH
Confidence 235578999999999999999999986432211 11111110 000000
Q ss_pred hhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhCCC
Q 045127 431 QLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSCPI 485 (508)
Q Consensus 431 ~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~ 485 (508)
... .+ .....+.+++.+||+.||++|||+++|++.|+++.+....
T Consensus 243 ~~~-~~---------~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~~ 287 (298)
T 1csn_A 243 REL-CA---------GFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNT 287 (298)
T ss_dssp HHH-TT---------TSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred HHH-Hh---------hCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcCC
Confidence 000 00 1245677899999999999999999999999999887543
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-39 Score=317.55 Aligned_cols=238 Identities=16% Similarity=0.192 Sum_probs=183.0
Q ss_pred cCCCCCceeeecCCeEEEEEEE-----CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecC--Cee
Q 045127 238 NGFSKKNLVGKNEGAAIYKGIL-----RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSR--RTR 310 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~ 310 (508)
+.|+..+.||+|+||.||+|++ .+++.||+|++.........+.+.+|+.++++++||||+++++++... ...
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 100 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 100 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence 4578889999999999999984 358899999997655444567899999999999999999999999876 668
Q ss_pred EEEEeecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCCC----
Q 045127 311 AIVTEWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEYQ---- 384 (508)
Q Consensus 311 ~lv~e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~---- 384 (508)
++||||+++|+|.+++. ...+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||.+..
T Consensus 101 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 179 (302)
T 4e5w_A 101 KLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSR-QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETD 179 (302)
T ss_dssp EEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEEETTEEEECCCTTCEECCTT
T ss_pred EEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcC-CcccCCCchheEEEcCCCCEEECcccccccccCC
Confidence 99999999999999995 56799999999999999999999999 999999999999999999999999987521
Q ss_pred --------------------------CCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccc----hhhhhh
Q 045127 385 --------------------------HRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPE----NLQLVV 434 (508)
Q Consensus 385 --------------------------~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 434 (508)
++.++||||||+++|||++|+.|+...... ........... .....+
T Consensus 180 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 256 (302)
T 4e5w_A 180 KEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMAL---FLKMIGPTHGQMTVTRLVNTL 256 (302)
T ss_dssp CCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHH---HHHHHCSCCGGGHHHHHHHHH
T ss_pred CcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhH---HhhccCCcccccCHHHHHHHH
Confidence 234689999999999999999987532100 00000000000 011111
Q ss_pred hhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHH
Q 045127 435 DERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAY 480 (508)
Q Consensus 435 ~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~ 480 (508)
..... ..........+.+++.+||+.||.+|||+.|+++.|+++.
T Consensus 257 ~~~~~-~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 257 KEGKR-LPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp HTTCC-CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred hccCC-CCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 11100 0001122456788999999999999999999999999875
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-38 Score=314.54 Aligned_cols=235 Identities=12% Similarity=0.125 Sum_probs=189.0
Q ss_pred hhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEe----cCCee
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNN----SRRTR 310 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~----~~~~~ 310 (508)
..++|+..+.||+|+||.||+|.. .+++.||+|++... .....+.+.+|+.++++++||||+++++++. .....
T Consensus 27 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 105 (317)
T 2buj_A 27 DNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCH-EQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEA 105 (317)
T ss_dssp TTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEES-SHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEE
T ss_pred CCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecC-CHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCcee
Confidence 346799999999999999999997 57899999998653 3446778999999999999999999999987 23477
Q ss_pred EEEEeecCCCCHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC--
Q 045127 311 AIVTEWTNGGNVELWLS-----ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY-- 383 (508)
Q Consensus 311 ~lv~e~~~~gsL~~~l~-----~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~-- 383 (508)
++||||+++|+|.+++. ...+++.++..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||.+.
T Consensus 106 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~-~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~ 184 (317)
T 2buj_A 106 WLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK-GYAHRDLKPTNILLGDEGQPVLMDLGSMNQA 184 (317)
T ss_dssp EEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTSCEEECCCSSCEES
T ss_pred EEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHEEEcCCCCEEEEecCcchhc
Confidence 99999999999999987 36789999999999999999999999 99999999999999999999999998521
Q ss_pred -------------------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhc
Q 045127 384 -------------------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHY 426 (508)
Q Consensus 384 -------------------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~ 426 (508)
.++.++||||||+++|||++|+.||..................
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~ 264 (317)
T 2buj_A 185 CIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQL 264 (317)
T ss_dssp CEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHHCC-
T ss_pred ccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhhccC
Confidence 1367899999999999999999999754322222222111100
Q ss_pred cchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhCCC
Q 045127 427 PENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSCPI 485 (508)
Q Consensus 427 ~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~ 485 (508)
..... ......+.+++.+||+.||.+|||+.|+++.|+.+....+.
T Consensus 265 ----------~~~~~---~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~~~ 310 (317)
T 2buj_A 265 ----------SIPQS---PRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAPG 310 (317)
T ss_dssp -----------CCCC---TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCCCC
T ss_pred ----------CCCcc---ccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCCCC
Confidence 00000 11235678899999999999999999999999988655443
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-38 Score=317.25 Aligned_cols=240 Identities=18% Similarity=0.329 Sum_probs=196.0
Q ss_pred CCCHHHHHHhhcCCCCCceeeecCCeEEEEEEEC------CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccce
Q 045127 227 KFTTWMLKAATNGFSKKNLVGKNEGAAIYKGILR------DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRV 300 (508)
Q Consensus 227 ~~~~~~l~~~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 300 (508)
.+..++.....++|+..+.||+|+||.||+|.+. +++.||+|.+...........+.+|+.++++++||||+++
T Consensus 14 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 93 (322)
T 1p4o_A 14 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRL 93 (322)
T ss_dssp CCCCCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCE
T ss_pred ccChhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeee
Confidence 3444455567788999999999999999999864 3678999999876666667789999999999999999999
Q ss_pred eeEEecCCeeEEEEeecCCCCHHHHhcc-----------CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEec
Q 045127 301 LGWNNSRRTRAIVTEWTNGGNVELWLSE-----------SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLT 369 (508)
Q Consensus 301 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~-----------~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~ 369 (508)
++++.++...++||||+++|+|.+++.. ..+++..+..++.|++.||+|||++ ||+||||||+||+++
T Consensus 94 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dikp~NIli~ 172 (322)
T 1p4o_A 94 LGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN-KFVHRDLAARNCMVA 172 (322)
T ss_dssp EEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT-TCBCSCCSGGGEEEC
T ss_pred EEEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC-CCccCCCccceEEEc
Confidence 9999999999999999999999999872 4679999999999999999999999 999999999999999
Q ss_pred CCCceEEeeccCCC-----------------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHH
Q 045127 370 DNLEPLISRFKIEY-----------------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFI 419 (508)
Q Consensus 370 ~~~~~kl~Dfg~~~-----------------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~ 419 (508)
.++.+||+|||.+. .++.++||||||+++|||++ |+.||...... ...
T Consensus 173 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~~ 250 (322)
T 1p4o_A 173 EDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE--QVL 250 (322)
T ss_dssp TTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHH--HHH
T ss_pred CCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHH--HHH
Confidence 99999999998753 24567899999999999999 89998753221 111
Q ss_pred HHHHHhccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhh
Q 045127 420 EYIRMHYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKS 482 (508)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 482 (508)
..+.. ...... .......+.+++.+||+.||.+|||+.|+++.|+++...
T Consensus 251 ~~~~~-----------~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~ 300 (322)
T 1p4o_A 251 RFVME-----------GGLLDK--PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP 300 (322)
T ss_dssp HHHHT-----------TCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCT
T ss_pred HHHHc-----------CCcCCC--CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhcc
Confidence 11111 111000 011234577899999999999999999999999887553
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-39 Score=315.47 Aligned_cols=223 Identities=15% Similarity=0.151 Sum_probs=176.3
Q ss_pred hcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCH-------------------------HHHHHHHHHHHHHh
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSR-------------------------EIRDEFVEECKLLV 290 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~-------------------------~~~~~~~~E~~~l~ 290 (508)
.++|+..+.||+|+||.||+|.. .+++.||||++...... ...+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 46899999999999999999997 46899999999644211 12356889999999
Q ss_pred hcCCCCccceeeEEec--CCeeEEEEeecCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEe
Q 045127 291 QFQHKNLIRVLGWNNS--RRTRAIVTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLL 368 (508)
Q Consensus 291 ~l~h~niv~~~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll 368 (508)
+++||||+++++++.. ....++||||+++++|.+++....+++.++..++.|++.||+|||++ ||+||||||+||++
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dlkp~Nil~ 170 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQDLIKGIEYLHYQ-KIIHRDIKPSNLLV 170 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCSSCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEE
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHHEEE
Confidence 9999999999999986 56789999999999999988888899999999999999999999999 99999999999999
Q ss_pred cCCCceEEeeccCCCC------------------------------CCCcchhhHHHHHHHHHHhCCCCCcccccCcccH
Q 045127 369 TDNLEPLISRFKIEYQ------------------------------HRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGF 418 (508)
Q Consensus 369 ~~~~~~kl~Dfg~~~~------------------------------~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~ 418 (508)
+.++.+||+|||++.. .+.++|||||||++|||++|+.||...... .+
T Consensus 171 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~--~~ 248 (298)
T 2zv2_A 171 GEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIM--CL 248 (298)
T ss_dssp CTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HH
T ss_pred CCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHH--HH
Confidence 9999999999987421 134579999999999999999999743211 11
Q ss_pred HHHHHHhccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 419 IEYIRMHYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
...+.. ...... ........+.+++.+||+.||++|||+.|+++
T Consensus 249 ~~~~~~-----------~~~~~~-~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 249 HSKIKS-----------QALEFP-DQPDIAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp HHHHHH-----------CCCCCC-SSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred HHHHhc-----------ccCCCC-CccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 111110 000000 00112346778999999999999999999975
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-39 Score=320.75 Aligned_cols=247 Identities=14% Similarity=0.134 Sum_probs=186.4
Q ss_pred cCCCCCceeeecCCeEEEEEEE-----CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEe--cCCee
Q 045127 238 NGFSKKNLVGKNEGAAIYKGIL-----RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNN--SRRTR 310 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~--~~~~~ 310 (508)
++|+..+.||+|+||.||+|.+ .+++.||||++... .....+.+.+|++++++++||||+++++++. .....
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 101 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS-GPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSL 101 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccC-CHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceE
Confidence 5788899999999999999984 35789999999654 3445678999999999999999999999887 45668
Q ss_pred EEEEeecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCCC----
Q 045127 311 AIVTEWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEYQ---- 384 (508)
Q Consensus 311 ~lv~e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~---- 384 (508)
++||||+++++|.+++. ...+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||.+..
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~ 180 (327)
T 3lxl_A 102 RLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSR-RCVHRDLAARNILVESEAHVKIADFGLAKLLPLD 180 (327)
T ss_dssp EEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEEETTEEEECCGGGCEECCTT
T ss_pred EEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC-CccCCCCChhhEEECCCCCEEEcccccceecccC
Confidence 99999999999999997 45699999999999999999999999 999999999999999999999999987531
Q ss_pred --------------------------CCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccc---hhhhhhh
Q 045127 385 --------------------------HRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPE---NLQLVVD 435 (508)
Q Consensus 385 --------------------------~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 435 (508)
++.++||||||+++|+|++|+.||........ ..+....... ...+.+.
T Consensus 181 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 258 (327)
T 3lxl_A 181 KDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFL--RMMGCERDVPALSRLLELLE 258 (327)
T ss_dssp CSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHH--HHCC----CCHHHHHHHHHH
T ss_pred CccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhh--hhcccccccccHHHHHHHhh
Confidence 24578999999999999999999864321100 0000000000 0111111
Q ss_pred hcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCC
Q 045127 436 ERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSCPILTSE 489 (508)
Q Consensus 436 ~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~~ 489 (508)
.... ..........+.+++.+||+.||++|||+.|+++.|+.+..........
T Consensus 259 ~~~~-~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~~~~ 311 (327)
T 3lxl_A 259 EGQR-LPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSRGCETH 311 (327)
T ss_dssp TTCC-CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC----------
T ss_pred cccC-CCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhcCcccc
Confidence 1110 0011123456788999999999999999999999999998766555443
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-38 Score=312.88 Aligned_cols=245 Identities=11% Similarity=0.210 Sum_probs=196.0
Q ss_pred CHHHHHHhhcCCCCCceeeecCCeEEEEEEECCCCEEEEEEecCCCCHHHHHHHHHHHHHHhh--cCCCCccceeeEEec
Q 045127 229 TTWMLKAATNGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQ--FQHKNLIRVLGWNNS 306 (508)
Q Consensus 229 ~~~~l~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~~~~~~~~ 306 (508)
+...-....++|+..+.||+|+||.||+|.+ +++.||||++... ....+.+|.+++.. ++||||+++++++..
T Consensus 33 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~----~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~ 107 (342)
T 1b6c_B 33 PLLVQRTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR----EERSWFREAEIYQTVMLRHENILGFIAADNK 107 (342)
T ss_dssp CHHHHHHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG----GHHHHHHHHHHHHHSCCCCTTBCCEEEEEEC
T ss_pred ceeecccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch----hHHHHHHHHHHHHHhhcCCCcEEEEEeeecc
Confidence 3333445667899999999999999999998 4899999999532 34667888888887 789999999999987
Q ss_pred CC----eeEEEEeecCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHh--------hCCCccccCCCCCCEEecCCCce
Q 045127 307 RR----TRAIVTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQ--------EQWPEVDYDLRTGSVLLTDNLEP 374 (508)
Q Consensus 307 ~~----~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH--------~~~~iiH~Dlkp~NIll~~~~~~ 374 (508)
.. ..++||||+++|+|.+++....+++.++..++.|++.||+||| +. +|+||||||+||+++.++.+
T Consensus 108 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~-~ivH~Dlkp~NIll~~~~~~ 186 (342)
T 1b6c_B 108 DNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP-AIAHRDLKSKNILVKKNGTC 186 (342)
T ss_dssp CCSSCCCEEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC-EEECSCCSGGGEEECTTSCE
T ss_pred cCCccceeEEEEeecCCCcHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHhhhcccC-CeeeCCCCHHHEEECCCCCE
Confidence 65 7899999999999999999888999999999999999999999 88 99999999999999999999
Q ss_pred EEeeccCCCC-------------------------------------CCCcchhhHHHHHHHHHHhC----------CCC
Q 045127 375 LISRFKIEYQ-------------------------------------HRSTKYVYKFGLFLLEMITN----------RRP 407 (508)
Q Consensus 375 kl~Dfg~~~~-------------------------------------~~~~~Dv~SlGvil~elltg----------~~P 407 (508)
||+|||.+.. ++.++|||||||++|||+|| +.|
T Consensus 187 kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p 266 (342)
T 1b6c_B 187 CIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLP 266 (342)
T ss_dssp EECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCT
T ss_pred EEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccC
Confidence 9999987411 11468999999999999999 778
Q ss_pred CcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhC
Q 045127 408 LEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSC 483 (508)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 483 (508)
|............+........ ..+.+............+.+++.+||+.||++|||+.||++.|+++.+..
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~~ 338 (342)
T 1b6c_B 267 YYDLVPSDPSVEEMRKVVCEQK----LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 338 (342)
T ss_dssp TTTTSCSSCCHHHHHHHHTTSC----CCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred ccccCcCcccHHHHHHHHHHHH----hCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHHh
Confidence 8765443333333332221111 11111111111245678899999999999999999999999999998764
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-39 Score=312.62 Aligned_cols=231 Identities=17% Similarity=0.248 Sum_probs=181.9
Q ss_pred hcCCCCCceeeecCCeEEEEEEEC-CC-------CEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCC
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGILR-DG-------TRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRR 308 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~~-~~-------~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 308 (508)
.++|+..+.||+|+||.||+|... ++ ..||+|++.... ....+.+.+|+.++++++||||+++++++..++
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 85 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAH-RNYSESFFEAASMMSKLSHKHLVLNYGVCVCGD 85 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGG-GGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTT
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhccccc-HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCC
Confidence 357888999999999999999864 23 479999996433 335678999999999999999999999999999
Q ss_pred eeEEEEeecCCCCHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCc--------eEEee
Q 045127 309 TRAIVTEWTNGGNVELWLSE--SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLE--------PLISR 378 (508)
Q Consensus 309 ~~~lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~--------~kl~D 378 (508)
..++||||+++|+|.+++.. ..+++..+..++.|++.||+|||++ ||+||||||+||+++.++. +||+|
T Consensus 86 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~-~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~D 164 (289)
T 4fvq_A 86 ENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEEN-TLIHGNVCAKNILLIREEDRKTGNPPFIKLSD 164 (289)
T ss_dssp CCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEEEECCBGGGTBCCEEEECC
T ss_pred CCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhC-CeECCCcCcceEEEecCCcccccccceeeecc
Confidence 99999999999999999983 3499999999999999999999999 9999999999999998877 99999
Q ss_pred ccCC------------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhh
Q 045127 379 FKIE------------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVV 434 (508)
Q Consensus 379 fg~~------------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (508)
||.+ ..++.++||||||+++|||++|..|+....... ........
T Consensus 165 fg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~-~~~~~~~~---------- 233 (289)
T 4fvq_A 165 PGISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQ-RKLQFYED---------- 233 (289)
T ss_dssp CCSCTTTSCHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH-HHHHHHHT----------
T ss_pred CcccccccCccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchH-HHHHHhhc----------
Confidence 9975 335678999999999999999654443221111 11111110
Q ss_pred hhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhCCC
Q 045127 435 DERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSCPI 485 (508)
Q Consensus 435 ~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~ 485 (508)
...+.. .....+.+++.+||+.||++|||+.|+++.|+++..+...
T Consensus 234 ~~~~~~-----~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~~~ 279 (289)
T 4fvq_A 234 RHQLPA-----PKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDLV 279 (289)
T ss_dssp TCCCCC-----CSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC-----
T ss_pred cCCCCC-----CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCCC
Confidence 000000 0123466789999999999999999999999998765443
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-38 Score=318.21 Aligned_cols=226 Identities=16% Similarity=0.215 Sum_probs=183.2
Q ss_pred hhcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCH-----HHHHHHHHHHHHHhhcCCCCccceeeEEecCCe
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSR-----EIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRT 309 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 309 (508)
..+.|+..+.||+|+||.||+|... +|+.||+|+++..... ...+.+.+|+.++++++||||+++++++.+...
T Consensus 10 ~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 89 (361)
T 2yab_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTD 89 (361)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred hhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCE
Confidence 4567999999999999999999974 6899999999754322 135778999999999999999999999999999
Q ss_pred eEEEEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCC----ceEEeeccCCC-
Q 045127 310 RAIVTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNL----EPLISRFKIEY- 383 (508)
Q Consensus 310 ~~lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~----~~kl~Dfg~~~- 383 (508)
.++||||+++|+|.+++. ...+++..+..++.||+.||+|||++ ||+||||||+||+++.++ .+||+|||++.
T Consensus 90 ~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~-givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~ 168 (361)
T 2yab_A 90 VVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK-KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE 168 (361)
T ss_dssp EEEEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEESCTTSSSCCEEECCCSSCEE
T ss_pred EEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEEeCCCCCccCEEEEecCCceE
Confidence 999999999999999997 56799999999999999999999999 999999999999998776 79999998742
Q ss_pred -------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcc
Q 045127 384 -------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERM 438 (508)
Q Consensus 384 -------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 438 (508)
.++.++|||||||++|+|++|..||....... ....+..... .+ ++..
T Consensus 169 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~--~~~~i~~~~~-~~----~~~~ 241 (361)
T 2yab_A 169 IEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE--TLANITAVSY-DF----DEEF 241 (361)
T ss_dssp CCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH--HHHHHHTTCC-CC----CHHH
T ss_pred cCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHhcCC-CC----Cchh
Confidence 35678999999999999999999997532111 1111111000 00 0000
Q ss_pred cCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 439 MLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 439 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
.......+.+++.+||..||.+|||+.|+++
T Consensus 242 -----~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 242 -----FSQTSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp -----HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred -----ccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 0011345778999999999999999999985
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-38 Score=314.65 Aligned_cols=232 Identities=24% Similarity=0.410 Sum_probs=189.6
Q ss_pred cCCCCCceeeecCCeEEEEEEECC-----CCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEE
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILRD-----GTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAI 312 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 312 (508)
++|+..+.||+|+||.||+|.... +..||+|.++..........+.+|+.++++++||||+++++++......++
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 123 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI 123 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence 456667999999999999998642 236999999876666667789999999999999999999999999999999
Q ss_pred EEeecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-------
Q 045127 313 VTEWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------- 383 (508)
Q Consensus 313 v~e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------- 383 (508)
||||+++|+|.+++. ...+++.++..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||.+.
T Consensus 124 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 202 (333)
T 1mqb_A 124 ITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANM-NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE 202 (333)
T ss_dssp EEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTCCEEECCCCC---------
T ss_pred EEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCChheEEECCCCcEEECCCCcchhhccccc
Confidence 999999999999997 46799999999999999999999999 99999999999999999999999998742
Q ss_pred -----------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhccc
Q 045127 384 -----------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMM 439 (508)
Q Consensus 384 -----------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 439 (508)
.++.++||||||+++|||++ |+.||...... .+...+.... ...
T Consensus 203 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~--~~~~~~~~~~----------~~~ 270 (333)
T 1mqb_A 203 ATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH--EVMKAINDGF----------RLP 270 (333)
T ss_dssp --------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHHHHTTC----------CCC
T ss_pred cccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHH--HHHHHHHCCC----------cCC
Confidence 23457899999999999999 99999753321 1111111110 000
Q ss_pred CCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhCCC
Q 045127 440 LTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSCPI 485 (508)
Q Consensus 440 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~ 485 (508)
.. ......+.+++.+||+.||++||++.|+++.|+++......
T Consensus 271 ~~---~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~~ 313 (333)
T 1mqb_A 271 TP---MDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPDS 313 (333)
T ss_dssp CC---TTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGGG
T ss_pred Cc---ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcchh
Confidence 01 11245677899999999999999999999999998765443
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-38 Score=312.31 Aligned_cols=237 Identities=15% Similarity=0.186 Sum_probs=183.5
Q ss_pred HhhcCCCCCceeeecCCeEEEEEEECCCCEEEEEEecCCCCH-HHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEE
Q 045127 235 AATNGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSR-EIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIV 313 (508)
Q Consensus 235 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 313 (508)
...++|+..+.||+|+||.||+|...+|+.||+|++...... .....+.+|++++++++||||+++++++.++...++|
T Consensus 18 ~l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 97 (311)
T 3niz_A 18 GLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLV 97 (311)
T ss_dssp CSSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEE
T ss_pred chHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEE
Confidence 455789999999999999999999988999999999644322 2357788999999999999999999999999999999
Q ss_pred EeecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC---------
Q 045127 314 TEWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE--------- 382 (508)
Q Consensus 314 ~e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~--------- 382 (508)
|||+++ +|.+++. ...+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||.+
T Consensus 98 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~-~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~ 175 (311)
T 3niz_A 98 FEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH-RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRS 175 (311)
T ss_dssp EECCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC-
T ss_pred EcCCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCchHhEEECCCCCEEEccCcCceecCCCccc
Confidence 999985 7887776 44589999999999999999999999 9999999999999999999999999864
Q ss_pred -------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccc---hhhhh------h
Q 045127 383 -------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPE---NLQLV------V 434 (508)
Q Consensus 383 -------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~---~~~~~------~ 434 (508)
..++.++|||||||++|||++|+.||....... .+.......... ..... .
T Consensus 176 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~ 254 (311)
T 3niz_A 176 YTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDD-QLPKIFSILGTPNPREWPQVQELPLWK 254 (311)
T ss_dssp --CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTT-HHHHHHHHHCCCCTTTSGGGTTSHHHH
T ss_pred ccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHHCCCChHHhhhhhccchhh
Confidence 234678899999999999999999997654332 122222111110 00000 0
Q ss_pred hhcccCCc-ch-----HHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 435 DERMMLTE-NM-----FDQAEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 435 ~~~l~~~~-~~-----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
+....... .. .....++.+++.+||+.||++|||++|+++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 255 QRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp SCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred hcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 00000000 00 011346778999999999999999999986
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-37 Score=309.77 Aligned_cols=247 Identities=14% Similarity=0.246 Sum_probs=190.9
Q ss_pred CHHHHHHhhcCCCCCceeeecCCeEEEEEEECCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhc--CCCCccceeeEEec
Q 045127 229 TTWMLKAATNGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQF--QHKNLIRVLGWNNS 306 (508)
Q Consensus 229 ~~~~l~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~~~~~~~~ 306 (508)
+...-....++|+..+.||+|+||.||+|.+. ++.||||++... ....+.+|.+++... +||||+++++++..
T Consensus 28 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~ 102 (337)
T 3mdy_A 28 PLLVQRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT----EEASWFRETEIYQTVLMRHENILGFIAADIK 102 (337)
T ss_dssp CHHHHTTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEE
T ss_pred CcccccccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc----ccchhhhHHHHHHHHhhcCCCeeeEEEEEcc
Confidence 33444456688999999999999999999986 899999998533 234455566665554 89999999999987
Q ss_pred C----CeeEEEEeecCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCC-------CccccCCCCCCEEecCCCceE
Q 045127 307 R----RTRAIVTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQW-------PEVDYDLRTGSVLLTDNLEPL 375 (508)
Q Consensus 307 ~----~~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~-------~iiH~Dlkp~NIll~~~~~~k 375 (508)
. ...++||||+++|+|.+++....+++..+..++.|++.||+|||+++ ||+||||||+||+++.++.+|
T Consensus 103 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~k 182 (337)
T 3mdy_A 103 GTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCC 182 (337)
T ss_dssp SCGGGCEEEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEE
T ss_pred CCCCCCceEEEEeccCCCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEE
Confidence 6 67899999999999999999888999999999999999999999763 899999999999999999999
Q ss_pred EeeccCCCC-------------------------------CCC------cchhhHHHHHHHHHHhC----------CCCC
Q 045127 376 ISRFKIEYQ-------------------------------HRS------TKYVYKFGLFLLEMITN----------RRPL 408 (508)
Q Consensus 376 l~Dfg~~~~-------------------------------~~~------~~Dv~SlGvil~elltg----------~~P~ 408 (508)
|+|||.+.. .+. ++|||||||++|||+|| +.||
T Consensus 183 l~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~ 262 (337)
T 3mdy_A 183 IADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPY 262 (337)
T ss_dssp ECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTT
T ss_pred EEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccH
Confidence 999997521 112 28999999999999999 6666
Q ss_pred cccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhCC
Q 045127 409 EEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSCP 484 (508)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 484 (508)
..................... ..+.+............+.+++.+||+.||++|||+.|+++.|+++.++..
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~ 334 (337)
T 3mdy_A 263 HDLVPSDPSYEDMREIVCIKK----LRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQD 334 (337)
T ss_dssp TTTSCSSCCHHHHHHHHTTSC----CCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTTT
T ss_pred hhhcCCCCchhhhHHHHhhhc----cCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhcc
Confidence 544333322222221111111 111111111122557788999999999999999999999999999987654
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-38 Score=307.69 Aligned_cols=233 Identities=17% Similarity=0.273 Sum_probs=187.9
Q ss_pred hcCCCCCceeeecCCeEEEEEEECC----CCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEe-cCCeeE
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGILRD----GTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNN-SRRTRA 311 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-~~~~~~ 311 (508)
...|+..+.||+|+||.||+|.+.+ +..||+|.+.........+.+.+|+.++++++||||+++++++. .+...+
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 103 (298)
T 3f66_A 24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 103 (298)
T ss_dssp GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCE
T ss_pred ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceE
Confidence 3567888999999999999999642 23689999987666667788999999999999999999999865 456789
Q ss_pred EEEeecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC------
Q 045127 312 IVTEWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------ 383 (508)
Q Consensus 312 lv~e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------ 383 (508)
+||||+++|+|.+++. ...+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||.+.
T Consensus 104 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~-~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~ 182 (298)
T 3f66_A 104 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK-KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 182 (298)
T ss_dssp EEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGG
T ss_pred EEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC-CccCCCCchheEEECCCCCEEECcccccccccccc
Confidence 9999999999999997 45689999999999999999999999 99999999999999999999999998753
Q ss_pred -------------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhc
Q 045127 384 -------------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDER 437 (508)
Q Consensus 384 -------------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (508)
.++.++||||||+++|||++ |.+||....... ...........
T Consensus 183 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~--------- 251 (298)
T 3f66_A 183 YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD--ITVYLLQGRRL--------- 251 (298)
T ss_dssp GCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTT--HHHHHHTTCCC---------
T ss_pred hhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHH--HHHHHhcCCCC---------
Confidence 23557899999999999999 555665432221 22211111100
Q ss_pred ccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhCCC
Q 045127 438 MMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSCPI 485 (508)
Q Consensus 438 l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~ 485 (508)
... ......+.+++.+||+.||++|||+.|+++.|+++...+..
T Consensus 252 -~~~---~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~~ 295 (298)
T 3f66_A 252 -LQP---EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 295 (298)
T ss_dssp -CCC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSCC
T ss_pred -CCC---ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhcc
Confidence 000 01134577899999999999999999999999999887654
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-38 Score=309.32 Aligned_cols=228 Identities=21% Similarity=0.340 Sum_probs=183.3
Q ss_pred hcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHH---H---HHHHHHHHHHHhhcCCCCccceeeEEecCCe
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSRE---I---RDEFVEECKLLVQFQHKNLIRVLGWNNSRRT 309 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~---~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 309 (508)
.++|+..+.||+|+||.||+|.. .+++.||+|++....... . .+.+.+|+.++++++||||+++++++.+..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence 46788999999999999999997 578999999986433221 1 167899999999999999999999987655
Q ss_pred eEEEEeecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCC--ccccCCCCCCEEecCCCc-----eEEeecc
Q 045127 310 RAIVTEWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWP--EVDYDLRTGSVLLTDNLE-----PLISRFK 380 (508)
Q Consensus 310 ~~lv~e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~--iiH~Dlkp~NIll~~~~~-----~kl~Dfg 380 (508)
++||||+++|+|.+++. ...+++..+..++.|++.||+|||++ + |+||||||+||+++.++. +||+|||
T Consensus 97 -~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~-~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg 174 (287)
T 4f0f_A 97 -RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFG 174 (287)
T ss_dssp -EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTS-SSCCBCSCCSGGGEEESCCCTTCSCCEEECCCT
T ss_pred -eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhC-CCCeecCCCCcceEEEeccCCCCceeEEeCCCC
Confidence 79999999999998885 55799999999999999999999999 9 999999999999988776 9999998
Q ss_pred CCC--------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhh
Q 045127 381 IEY--------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVV 434 (508)
Q Consensus 381 ~~~--------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (508)
.+. .++.++|||||||++|||++|+.||.................. .
T Consensus 175 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~-------~ 247 (287)
T 4f0f_A 175 LSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEG-------L 247 (287)
T ss_dssp TCBCCSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSC-------C
T ss_pred ccccccccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccC-------C
Confidence 642 2345789999999999999999999765443322222211110 0
Q ss_pred hhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHH
Q 045127 435 DERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRA 479 (508)
Q Consensus 435 ~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i 479 (508)
.+.+. ......+.+++.+||+.||.+|||++|+++.|+++
T Consensus 248 ~~~~~-----~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 248 RPTIP-----EDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp CCCCC-----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred CCCCC-----cccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 01110 11245677899999999999999999999999864
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-38 Score=315.70 Aligned_cols=222 Identities=14% Similarity=0.191 Sum_probs=178.0
Q ss_pred hhcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCC------
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRR------ 308 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------ 308 (508)
..++|+..+.||+|+||.||+|+.. +|+.||||+++........+.+.+|+.++++++||||+++++++.+..
T Consensus 4 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 83 (332)
T 3qd2_B 4 YLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQE 83 (332)
T ss_dssp HHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHH
T ss_pred hhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhh
Confidence 4567899999999999999999985 799999999975555556788999999999999999999999886543
Q ss_pred ---------------------------------------------------eeEEEEeecCCCCHHHHhcc----CCCCH
Q 045127 309 ---------------------------------------------------TRAIVTEWTNGGNVELWLSE----SAPSW 333 (508)
Q Consensus 309 ---------------------------------------------------~~~lv~e~~~~gsL~~~l~~----~~l~~ 333 (508)
..++||||+++|+|.+++.. ...++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~ 163 (332)
T 3qd2_B 84 EMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREH 163 (332)
T ss_dssp HHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCH
T ss_pred hhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhh
Confidence 37999999999999999983 33567
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC------------------------------
Q 045127 334 KHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------------------------------ 383 (508)
Q Consensus 334 ~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------------------------------ 383 (508)
..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||.+.
T Consensus 164 ~~~~~i~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y 242 (332)
T 3qd2_B 164 GVCLHIFIQIAEAVEFLHSK-GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLY 242 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGG
T ss_pred HHHHHHHHHHHHHHHHHHhC-CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCc
Confidence 77899999999999999999 99999999999999999999999998742
Q ss_pred ---------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHHHHHHHH
Q 045127 384 ---------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQAEQGLGL 454 (508)
Q Consensus 384 ---------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l 454 (508)
.++.++|||||||++|||++|..|+.... ....... ... ...........+.++
T Consensus 243 ~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~----~~~~~~~-----------~~~--~~~~~~~~~~~~~~l 305 (332)
T 3qd2_B 243 MSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERV----RIITDVR-----------NLK--FPLLFTQKYPQEHMM 305 (332)
T ss_dssp SCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHH----HHHHHHH-----------TTC--CCHHHHHHCHHHHHH
T ss_pred cChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHH----HHHHHhh-----------ccC--CCcccccCChhHHHH
Confidence 34678999999999999999987754211 0000000 000 011112234456789
Q ss_pred HHhcCCCCCCCCCCHHHHHHH
Q 045127 455 GLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 455 ~~~Cl~~dP~~RPs~~evl~~ 475 (508)
+.+||+.||++|||+.|+++.
T Consensus 306 i~~~l~~~p~~Rps~~~~l~~ 326 (332)
T 3qd2_B 306 VQDMLSPSPTERPEATDIIEN 326 (332)
T ss_dssp HHHHHCSSGGGSCCHHHHHHS
T ss_pred HHHHccCCCCcCCCHHHHhhc
Confidence 999999999999999999863
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-38 Score=315.82 Aligned_cols=228 Identities=16% Similarity=0.239 Sum_probs=186.0
Q ss_pred hcCCCCCceeeecCCeEEEEEEEC-CCCE----EEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeE
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGILR-DGTR----VKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRA 311 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~----vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 311 (508)
.++|+..+.||+|+||.||+|.+. +++. ||+|.+.........+.+.+|+.++++++||||+++++++..+. .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~ 92 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence 367899999999999999999973 4443 57888765555456788999999999999999999999998765 78
Q ss_pred EEEeecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC------
Q 045127 312 IVTEWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------ 383 (508)
Q Consensus 312 lv~e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------ 383 (508)
+|+||+++|+|.+++. ...+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||.+.
T Consensus 93 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~ 171 (327)
T 3lzb_A 93 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 171 (327)
T ss_dssp EEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEEEETTEEEECCTTC--------
T ss_pred EEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhC-CCcCCCCCHHHEEEcCCCCEEEccCcceeEccCcc
Confidence 9999999999999997 46799999999999999999999999 99999999999999999999999998752
Q ss_pred -----------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhccc
Q 045127 384 -----------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMM 439 (508)
Q Consensus 384 -----------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 439 (508)
.++.++|||||||++|||++ |+.||....... +...+..... ..
T Consensus 172 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~--~~~~~~~~~~----------~~ 239 (327)
T 3lzb_A 172 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE--ISSILEKGER----------LP 239 (327)
T ss_dssp --------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--HHHHHHTTCC----------CC
T ss_pred ccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHH--HHHHHHcCCC----------CC
Confidence 24567899999999999999 999997543322 2222221110 00
Q ss_pred CCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHh
Q 045127 440 LTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYK 481 (508)
Q Consensus 440 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~ 481 (508)
.. ......+.+++.+||+.||.+|||+.|+++.|+++..
T Consensus 240 ~~---~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 278 (327)
T 3lzb_A 240 QP---PICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp CC---TTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHT
T ss_pred CC---ccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 01 1123457789999999999999999999999999874
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-37 Score=307.78 Aligned_cols=237 Identities=16% Similarity=0.209 Sum_probs=188.4
Q ss_pred hhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCC--CCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEE
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGD--VSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAI 312 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 312 (508)
..++|+..+.||+|+||.||+|.. .+|+.||+|++... ........+.+|+.++++++||||+++++++...+..++
T Consensus 30 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 109 (310)
T 2wqm_A 30 TLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNI 109 (310)
T ss_dssp SGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred cccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEE
Confidence 446799999999999999999997 57899999999642 234467789999999999999999999999999999999
Q ss_pred EEeecCCCCHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC----
Q 045127 313 VTEWTNGGNVELWLS-----ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY---- 383 (508)
Q Consensus 313 v~e~~~~gsL~~~l~-----~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~---- 383 (508)
||||+++++|.+++. ...+++..+..++.|++.||+|||++ |++||||||+||+++.++.+||+|||.+.
T Consensus 110 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~-~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~ 188 (310)
T 2wqm_A 110 VLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR-RVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 188 (310)
T ss_dssp EEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTSCEEECCC--------
T ss_pred EEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC-CeeCCCCcHHHEEEcCCCCEEEEeccceeeecC
Confidence 999999999999986 46689999999999999999999999 99999999999999999999999998742
Q ss_pred -----------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccC
Q 045127 384 -----------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMML 440 (508)
Q Consensus 384 -----------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 440 (508)
.++.++||||||+++|||++|+.||.........+...+.... . +....
T Consensus 189 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~---~-----~~~~~ 260 (310)
T 2wqm_A 189 KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCD---Y-----PPLPS 260 (310)
T ss_dssp ----------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTC---S-----CCCCT
T ss_pred CCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhccc---C-----CCCcc
Confidence 2456789999999999999999999754322211211111100 0 00000
Q ss_pred CcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhCCC
Q 045127 441 TENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSCPI 485 (508)
Q Consensus 441 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~ 485 (508)
......+.+++.+||+.||++|||+.++++.|+++.+....
T Consensus 261 ----~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~~ 301 (310)
T 2wqm_A 261 ----DHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTAS 301 (310)
T ss_dssp ----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred ----cccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhhh
Confidence 11234677899999999999999999999999999877554
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-38 Score=308.48 Aligned_cols=231 Identities=19% Similarity=0.323 Sum_probs=188.2
Q ss_pred hhcCCCCCceeeecCCeEEEEEEECCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEe
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTE 315 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 315 (508)
..++|+..+.||+|+||.||+|...++..||+|.+..... ..+.+.+|++++++++||||+++++++.. +..++|||
T Consensus 11 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e 87 (279)
T 1qpc_A 11 PRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM--SPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITE 87 (279)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSS--CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred CHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcc--cHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEEe
Confidence 3467889999999999999999998888999999965433 35678999999999999999999999864 45899999
Q ss_pred ecCCCCHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC---------
Q 045127 316 WTNGGNVELWLSE---SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY--------- 383 (508)
Q Consensus 316 ~~~~gsL~~~l~~---~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~--------- 383 (508)
|+++++|.+++.. ..+++..+..++.|++.||+|||++ |++||||||+||+++.++.+||+|||.+.
T Consensus 88 ~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 166 (279)
T 1qpc_A 88 YMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER-NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTA 166 (279)
T ss_dssp CCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEEC
T ss_pred cCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHhhEEEcCCCCEEECCCcccccccCccccc
Confidence 9999999999983 3699999999999999999999999 99999999999999999999999998742
Q ss_pred -------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcc
Q 045127 384 -------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTEN 443 (508)
Q Consensus 384 -------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 443 (508)
.++.++||||||+++|||++ |+.||...... .....+..... ... .
T Consensus 167 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~~~~~~~~~~--------~~~--~-- 232 (279)
T 1qpc_A 167 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP--EVIQNLERGYR--------MVR--P-- 232 (279)
T ss_dssp CTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HHHHHHHTTCC--------CCC--C--
T ss_pred ccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHH--HHHHHHhcccC--------CCC--c--
Confidence 23456899999999999999 99999753221 11111111110 000 0
Q ss_pred hHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhCCC
Q 045127 444 MFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSCPI 485 (508)
Q Consensus 444 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~ 485 (508)
......+.+++.+||+.||++|||++++++.|+++......
T Consensus 233 -~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~ 273 (279)
T 1qpc_A 233 -DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEG 273 (279)
T ss_dssp -TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC--
T ss_pred -ccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhccC
Confidence 11235677899999999999999999999999999877554
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-38 Score=308.46 Aligned_cols=234 Identities=14% Similarity=0.215 Sum_probs=182.7
Q ss_pred cCCCCCceeeecCCeEEEEEEECCCCEEEEEEecCCCCH-HHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEee
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSR-EIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEW 316 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 316 (508)
++|+..+.||+|+||.||+|...+++.||+|++...... .....+.+|++++++++||||+++++++..++..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 578889999999999999999988999999999654322 2346788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC------------
Q 045127 317 TNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE------------ 382 (508)
Q Consensus 317 ~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~------------ 382 (508)
+++ +|.+++. ...+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||.+
T Consensus 82 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 159 (288)
T 1ob3_A 82 LDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR-RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTH 159 (288)
T ss_dssp CSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-------
T ss_pred cCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEEcCCCCEEEeECccccccCcccccccc
Confidence 975 8998887 46799999999999999999999999 9999999999999999999999999752
Q ss_pred ----------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccc---hhhh-----hhhhcc
Q 045127 383 ----------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPE---NLQL-----VVDERM 438 (508)
Q Consensus 383 ----------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~---~~~~-----~~~~~l 438 (508)
..++.++|||||||++|||++|+.||....... .+.......... .... ..++.+
T Consensus 160 ~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (288)
T 1ob3_A 160 EIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEAD-QLMRIFRILGTPNSKNWPNVTELPKYDPNF 238 (288)
T ss_dssp --CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCTTTSTTGGGSTTCCTTC
T ss_pred ccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHHCCCChhhchhhhccccccccc
Confidence 235778999999999999999999997543221 111111111000 0000 011111
Q ss_pred cCC------cchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 439 MLT------ENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 439 ~~~------~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
... .........+.+++.+||+.||++|||++|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 239 TVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp CCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 000 000012456778999999999999999999986
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-38 Score=313.36 Aligned_cols=236 Identities=21% Similarity=0.322 Sum_probs=189.1
Q ss_pred hcCCCCCceeeecCCeEEEEEEEC-CCCE--EEEEEecCCCCHHHHHHHHHHHHHHhhc-CCCCccceeeEEecCCeeEE
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGILR-DGTR--VKIEIYKGDVSREIRDEFVEECKLLVQF-QHKNLIRVLGWNNSRRTRAI 312 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~--vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~l 312 (508)
.++|+..+.||+|+||.||+|... ++.. ||+|.+.........+.+.+|+++++++ +||||+++++++.+.+..++
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 103 (327)
T 1fvr_A 24 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 103 (327)
T ss_dssp GGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEE
T ss_pred HHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEE
Confidence 367889999999999999999974 5654 4999997655555667899999999999 89999999999999999999
Q ss_pred EEeecCCCCHHHHhccC-----------------CCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceE
Q 045127 313 VTEWTNGGNVELWLSES-----------------APSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPL 375 (508)
Q Consensus 313 v~e~~~~gsL~~~l~~~-----------------~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~k 375 (508)
||||+++|+|.+++... .+++.++..++.|++.||+|||++ ||+||||||+||+++.++.+|
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~dlkp~NIl~~~~~~~k 182 (327)
T 1fvr_A 104 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK-QFIHRDLAARNILVGENYVAK 182 (327)
T ss_dssp EECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECGGGCEE
T ss_pred EEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC-CccCCCCccceEEEcCCCeEE
Confidence 99999999999999733 689999999999999999999999 999999999999999999999
Q ss_pred EeeccCCC--------------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccc
Q 045127 376 ISRFKIEY--------------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPE 428 (508)
Q Consensus 376 l~Dfg~~~--------------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~ 428 (508)
|+|||.+. .++.++||||||+++|||++ |+.||...... ..... ...
T Consensus 183 L~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~-----~~~~~-~~~ 256 (327)
T 1fvr_A 183 IADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA-----ELYEK-LPQ 256 (327)
T ss_dssp ECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-----HHHHH-GGG
T ss_pred EcccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHH-----HHHHH-hhc
Confidence 99998742 23567899999999999998 99999753211 11111 111
Q ss_pred hhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhCCCCCC
Q 045127 429 NLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSCPILTS 488 (508)
Q Consensus 429 ~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~ 488 (508)
. ..... . ......+.+++.+||+.||++|||++|+++.|+++.+.......
T Consensus 257 ~----~~~~~--~---~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~~~~ 307 (327)
T 1fvr_A 257 G----YRLEK--P---LNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKTYVN 307 (327)
T ss_dssp T----CCCCC--C---TTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSSCSBC
T ss_pred C----CCCCC--C---CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhhcCccc
Confidence 0 00000 0 11235677899999999999999999999999999887655443
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-38 Score=312.16 Aligned_cols=241 Identities=15% Similarity=0.237 Sum_probs=195.3
Q ss_pred CCHHHHHHhhcCCCCCceeeecCCeEEEEEEE------CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhc-CCCCccce
Q 045127 228 FTTWMLKAATNGFSKKNLVGKNEGAAIYKGIL------RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQF-QHKNLIRV 300 (508)
Q Consensus 228 ~~~~~l~~~~~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~ 300 (508)
+...+.....++|+..+.||+|+||.||+|.+ .+++.||||+++........+.+.+|+.+++++ +||||+++
T Consensus 17 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~ 96 (316)
T 2xir_A 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 96 (316)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred ccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeE
Confidence 44455566678999999999999999999985 246889999998766666678899999999999 69999999
Q ss_pred eeEEecCC-eeEEEEeecCCCCHHHHhccCC-----------------CCHHHHHHHHHHHHHHHHHHhhCCCccccCCC
Q 045127 301 LGWNNSRR-TRAIVTEWTNGGNVELWLSESA-----------------PSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLR 362 (508)
Q Consensus 301 ~~~~~~~~-~~~lv~e~~~~gsL~~~l~~~~-----------------l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlk 362 (508)
++++...+ ..++||||+++|+|.+++.... +++..+..++.|++.||+|||++ ||+|||||
T Consensus 97 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~i~H~dik 175 (316)
T 2xir_A 97 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR-KCIHRDLA 175 (316)
T ss_dssp EEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT-TCCCSCCS
T ss_pred EEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC-CcccccCc
Confidence 99987654 5899999999999999997322 78999999999999999999999 99999999
Q ss_pred CCCEEecCCCceEEeeccCCC-----------------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccc
Q 045127 363 TGSVLLTDNLEPLISRFKIEY-----------------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFE 412 (508)
Q Consensus 363 p~NIll~~~~~~kl~Dfg~~~-----------------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~ 412 (508)
|+||+++.++.+||+|||.+. .++.++||||||+++|||+| |+.||....
T Consensus 176 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~ 255 (316)
T 2xir_A 176 ARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK 255 (316)
T ss_dssp GGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred cceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccc
Confidence 999999999999999998753 23557899999999999998 999997543
Q ss_pred cCcccHHHHHHHhccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhC
Q 045127 413 RGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSC 483 (508)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 483 (508)
... .+...+..... ... . ......+.+++.+||+.||.+|||+.|+++.|+.+.+..
T Consensus 256 ~~~-~~~~~~~~~~~--------~~~--~---~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 312 (316)
T 2xir_A 256 IDE-EFCRRLKEGTR--------MRA--P---DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 312 (316)
T ss_dssp CSH-HHHHHHHHTCC--------CCC--C---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred hhH-HHHHHhccCcc--------CCC--C---CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence 222 11111111110 000 0 012345778899999999999999999999999987653
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-38 Score=317.45 Aligned_cols=228 Identities=17% Similarity=0.230 Sum_probs=182.9
Q ss_pred cCCCCCceeeecCCeEEEEEEEC-CCCE----EEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEE
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILR-DGTR----VKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAI 312 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~----vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 312 (508)
++|+..+.||+|+||.||+|.+. +++. ||+|.+...........+.+|+.++++++||||+++++++.. +..++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~ 91 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPG-SSLQL 91 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEECB-SSEEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcC-CccEE
Confidence 57888999999999999999974 4443 888888644433344567889999999999999999999864 56889
Q ss_pred EEeecCCCCHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-------
Q 045127 313 VTEWTNGGNVELWLSE--SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------- 383 (508)
Q Consensus 313 v~e~~~~gsL~~~l~~--~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------- 383 (508)
||||+++|+|.+++.. ..+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||.+.
T Consensus 92 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~ 170 (325)
T 3kex_A 92 VTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEH-GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDK 170 (325)
T ss_dssp EEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHT-TCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCTT
T ss_pred EEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhC-CCCCCccchheEEECCCCeEEECCCCcccccCcccc
Confidence 9999999999999973 5789999999999999999999999 99999999999999999999999998752
Q ss_pred ----------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhcccC
Q 045127 384 ----------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMML 440 (508)
Q Consensus 384 ----------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 440 (508)
.++.++|||||||++|||++ |+.||....... +...+..........
T Consensus 171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~--~~~~~~~~~~~~~~~-------- 240 (325)
T 3kex_A 171 QLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAE--VPDLLEKGERLAQPQ-------- 240 (325)
T ss_dssp CCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTH--HHHHHHTTCBCCCCT--------
T ss_pred cccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHH--HHHHHHcCCCCCCCC--------
Confidence 23557899999999999999 999997543221 222222111100000
Q ss_pred CcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhh
Q 045127 441 TENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKS 482 (508)
Q Consensus 441 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 482 (508)
.....+.+++.+||+.||.+|||+.|+++.|+++...
T Consensus 241 -----~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~ 277 (325)
T 3kex_A 241 -----ICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARD 277 (325)
T ss_dssp -----TBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTS
T ss_pred -----cCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 1123456788999999999999999999999988643
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-38 Score=304.12 Aligned_cols=230 Identities=15% Similarity=0.264 Sum_probs=188.4
Q ss_pred hhcCCCCCceeeecCCeEEEEEEECC----CCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeE
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGILRD----GTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRA 311 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 311 (508)
..++|+..+.||+|+||.||+|.+.+ +..||+|.+.........+.+.+|+.++++++||||+++++++.++ ..+
T Consensus 10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~ 88 (281)
T 3cc6_A 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE-PTW 88 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-SCE
T ss_pred cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-CCE
Confidence 45678899999999999999998632 3469999998766666778899999999999999999999998754 568
Q ss_pred EEEeecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC------
Q 045127 312 IVTEWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------ 383 (508)
Q Consensus 312 lv~e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------ 383 (508)
+||||+++++|.+++. ...+++..+..++.|++.||+|||++ |++||||||+||+++.++.+||+|||.+.
T Consensus 89 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 167 (281)
T 3cc6_A 89 IIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESI-NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDED 167 (281)
T ss_dssp EEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCSGGGEEEEETTEEEECCCCGGGCC----
T ss_pred EEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCccceEEECCCCcEEeCccCCCccccccc
Confidence 9999999999999997 45699999999999999999999999 99999999999999999999999998642
Q ss_pred ----------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhcccC
Q 045127 384 ----------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMML 440 (508)
Q Consensus 384 ----------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 440 (508)
.++.++||||||+++|||++ |+.||....... ....+..... ...
T Consensus 168 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~--~~~~~~~~~~----------~~~ 235 (281)
T 3cc6_A 168 YYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD--VIGVLEKGDR----------LPK 235 (281)
T ss_dssp -----CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGG--HHHHHHHTCC----------CCC
T ss_pred ccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHH--HHHHHhcCCC----------CCC
Confidence 23557899999999999998 999997543222 2222211110 000
Q ss_pred CcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhh
Q 045127 441 TENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKS 482 (508)
Q Consensus 441 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 482 (508)
. ......+.+++.+||+.||++|||+.|+++.|+++.+.
T Consensus 236 ~---~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~ 274 (281)
T 3cc6_A 236 P---DLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQM 274 (281)
T ss_dssp C---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred C---CCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHh
Confidence 0 01234577899999999999999999999999988654
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-38 Score=335.66 Aligned_cols=228 Identities=21% Similarity=0.315 Sum_probs=189.7
Q ss_pred hhcCCCCCceeeecCCeEEEEEEECC-CCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEE
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGILRD-GTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVT 314 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 314 (508)
..++|+..+.||+|+||.||+|.+.. +..||||.++.... ..+.|.+|+.++++++||||+++++++......++||
T Consensus 218 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 295 (495)
T 1opk_A 218 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 295 (495)
T ss_dssp CGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS--CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred CHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc--chHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEE
Confidence 34678888999999999999999854 88999999975433 3578999999999999999999999999999999999
Q ss_pred eecCCCCHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC--------
Q 045127 315 EWTNGGNVELWLS---ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY-------- 383 (508)
Q Consensus 315 e~~~~gsL~~~l~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~-------- 383 (508)
||+++|+|.+++. ...+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||++.
T Consensus 296 E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~-~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~ 374 (495)
T 1opk_A 296 EFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK-NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYT 374 (495)
T ss_dssp ECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEE
T ss_pred EccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCChhhEEECCCCcEEEeecccceeccCCcee
Confidence 9999999999997 35689999999999999999999999 99999999999999999999999998742
Q ss_pred --------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCc
Q 045127 384 --------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTE 442 (508)
Q Consensus 384 --------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 442 (508)
.++.++|||||||++|||++ |+.||...... .+...+..... +...
T Consensus 375 ~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~--~~~~~~~~~~~----------~~~~- 441 (495)
T 1opk_A 375 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYELLEKDYR----------MERP- 441 (495)
T ss_dssp CCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GHHHHHHTTCC----------CCCC-
T ss_pred ecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCCC----------CCCC-
Confidence 23457899999999999999 99999754322 12222221111 1111
Q ss_pred chHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHh
Q 045127 443 NMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYK 481 (508)
Q Consensus 443 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~ 481 (508)
......+.+++.+||+.||++|||+.+|++.|+.+..
T Consensus 442 --~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~ 478 (495)
T 1opk_A 442 --EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 478 (495)
T ss_dssp --TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCS
T ss_pred --CCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHh
Confidence 1224567789999999999999999999999998754
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-38 Score=314.00 Aligned_cols=222 Identities=18% Similarity=0.204 Sum_probs=183.0
Q ss_pred hcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCC--CHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEE
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDV--SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIV 313 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 313 (508)
.++|+..+.||+|+||.||+|+.. +|+.||+|+++... .......+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 467899999999999999999974 68999999996432 112356788999999999999999999999999999999
Q ss_pred EeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC---------
Q 045127 314 TEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY--------- 383 (508)
Q Consensus 314 ~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~--------- 383 (508)
|||+++|+|.+++. ...+++..+..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||++.
T Consensus 84 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~ 162 (337)
T 1o6l_A 84 MEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR-DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM 162 (337)
T ss_dssp EECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCCB
T ss_pred EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCcCCHHHEEECCCCCEEEeeccchhhcccCCCcc
Confidence 99999999999987 66799999999999999999999999 99999999999999999999999998742
Q ss_pred ------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchH
Q 045127 384 ------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMF 445 (508)
Q Consensus 384 ------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 445 (508)
.++.++|||||||++|||++|+.||...... .+...+ ....+....
T Consensus 163 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--~~~~~i-----------~~~~~~~p~--- 226 (337)
T 1o6l_A 163 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--RLFELI-----------LMEEIRFPR--- 226 (337)
T ss_dssp CCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHH-----------HHCCCCCCT---
T ss_pred cccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHH--HHHHHH-----------HcCCCCCCC---
Confidence 3467899999999999999999999743211 111111 111111111
Q ss_pred HHHHHHHHHHHhcCCCCCCCCC-----CHHHHHHH
Q 045127 446 DQAEQGLGLGLMCTDQPTGKLP-----SLVQIYNM 475 (508)
Q Consensus 446 ~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~ 475 (508)
.....+.+++.+||+.||++|| +++|+++.
T Consensus 227 ~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 227 TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp TSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred CCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 1234567889999999999999 89999864
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-38 Score=308.63 Aligned_cols=224 Identities=17% Similarity=0.167 Sum_probs=182.2
Q ss_pred hcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEe
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTE 315 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 315 (508)
.++|...+.||+|+||.||+|.. .++..||+|++.........+.+.+|++++++++||||+++++++.+....++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 100 (285)
T 3is5_A 21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVME 100 (285)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEE
Confidence 45788899999999999999997 46899999999765544456789999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEe---cCCCceEEeeccCCC----
Q 045127 316 WTNGGNVELWLS-----ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLL---TDNLEPLISRFKIEY---- 383 (508)
Q Consensus 316 ~~~~gsL~~~l~-----~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll---~~~~~~kl~Dfg~~~---- 383 (508)
|+++|+|.+++. ...+++..+..++.|++.||+|||++ ||+||||||+||++ +.++.+||+|||.+.
T Consensus 101 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~-~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~ 179 (285)
T 3is5_A 101 TCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ-HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKS 179 (285)
T ss_dssp CCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC---
T ss_pred eCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC-CEEECCCCHHHEEEecCCCCCCEEEEeeecceecCC
Confidence 999999999885 46799999999999999999999999 99999999999999 456889999999763
Q ss_pred ---------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCc
Q 045127 384 ---------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTE 442 (508)
Q Consensus 384 ---------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 442 (508)
.++.++||||||+++|||++|+.||....... ........ .+.....
T Consensus 180 ~~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~--~~~~~~~~---------~~~~~~~- 247 (285)
T 3is5_A 180 DEHSTNAAGTALYMAPEVFKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEE--VQQKATYK---------EPNYAVE- 247 (285)
T ss_dssp -------CTTGGGCCHHHHTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHHC---------CCCCCC--
T ss_pred cccCcCcccccCcCChHHhccCCCcccCeehHHHHHHHHHhCCCCCCCCCHHH--HHhhhccC---------Ccccccc-
Confidence 23457899999999999999999997543211 11111100 0000000
Q ss_pred chHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 443 NMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 443 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
.......+.+++.+||+.||++|||+.|+++
T Consensus 248 -~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 248 -CRPLTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp --CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred -cCcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0011345678999999999999999999986
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-38 Score=320.22 Aligned_cols=232 Identities=16% Similarity=0.284 Sum_probs=185.3
Q ss_pred CCCCCceeeecCCeEEEEEEEC--CC--CEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEec-CCeeEEE
Q 045127 239 GFSKKNLVGKNEGAAIYKGILR--DG--TRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNS-RRTRAIV 313 (508)
Q Consensus 239 ~~~~~~~lg~G~~g~V~~~~~~--~~--~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~~~~lv 313 (508)
.|+..+.||+|+||.||+|.+. ++ ..||+|.++........+.+.+|+.++++++||||+++++++.. ++..++|
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv 169 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 169 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence 4566789999999999999863 22 46899999765555667889999999999999999999998754 4578999
Q ss_pred EeecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC--------
Q 045127 314 TEWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY-------- 383 (508)
Q Consensus 314 ~e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~-------- 383 (508)
|||+++|+|.+++. ...+++.++..++.||++||+|||++ ||+||||||+||+++.++.+||+|||++.
T Consensus 170 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~ 248 (373)
T 3c1x_A 170 LPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK-KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFD 248 (373)
T ss_dssp EECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTCCEEECCC------------
T ss_pred EECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHC-CEecCccchheEEECCCCCEEEeeccccccccccccc
Confidence 99999999999997 45689999999999999999999999 99999999999999999999999998752
Q ss_pred -----------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhccc
Q 045127 384 -----------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMM 439 (508)
Q Consensus 384 -----------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 439 (508)
.++.++|||||||++|||+| |..||....... ....+..... ..
T Consensus 249 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~--~~~~~~~~~~----------~~ 316 (373)
T 3c1x_A 249 SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD--ITVYLLQGRR----------LL 316 (373)
T ss_dssp ---------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSC--HHHHHHTTCC----------CC
T ss_pred cccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHH--HHHHHHcCCC----------CC
Confidence 23557899999999999999 677776543222 2222211110 00
Q ss_pred CCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhCCCC
Q 045127 440 LTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSCPIL 486 (508)
Q Consensus 440 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~ 486 (508)
.. ......+.+++.+||+.||++|||+.|+++.|+++...+...
T Consensus 317 ~p---~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~~~ 360 (373)
T 3c1x_A 317 QP---EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE 360 (373)
T ss_dssp CC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCSC
T ss_pred CC---CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcccc
Confidence 01 112346778999999999999999999999999999877643
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-38 Score=317.33 Aligned_cols=222 Identities=15% Similarity=0.215 Sum_probs=181.6
Q ss_pred hhcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCC--CHHHHHHHHHHHHHHhhc-CCCCccceeeEEecCCeeE
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDV--SREIRDEFVEECKLLVQF-QHKNLIRVLGWNNSRRTRA 311 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 311 (508)
..++|+..+.||+|+||.||+|+.. +++.||+|+++... .......+.+|..+++.+ +||||+++++++.+.+..|
T Consensus 21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 100 (353)
T 3txo_A 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLF 100 (353)
T ss_dssp --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEE
Confidence 4578999999999999999999974 68999999996432 122356688999999988 6999999999999999999
Q ss_pred EEEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCCC------
Q 045127 312 IVTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEYQ------ 384 (508)
Q Consensus 312 lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~------ 384 (508)
+||||+++|+|.+++. ...+++..+..++.||+.||+|||++ ||+||||||+|||++.++.+||+|||++..
T Consensus 101 lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~-givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~~ 179 (353)
T 3txo_A 101 FVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDK-GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGV 179 (353)
T ss_dssp EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC---
T ss_pred EEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC-CCcccCCCHHHEEECCCCCEEEccccceeecccCCc
Confidence 9999999999999997 67899999999999999999999999 999999999999999999999999997532
Q ss_pred ---------------------CCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcc
Q 045127 385 ---------------------HRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTEN 443 (508)
Q Consensus 385 ---------------------~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 443 (508)
++.++|||||||++|||++|+.||....... +... +.........
T Consensus 180 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~--~~~~-----------i~~~~~~~p~- 245 (353)
T 3txo_A 180 TTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDD--LFEA-----------ILNDEVVYPT- 245 (353)
T ss_dssp ------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHH-----------HHHCCCCCCT-
T ss_pred cccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHH--HHHH-----------HHcCCCCCCC-
Confidence 4578999999999999999999997532211 1111 1111111111
Q ss_pred hHHHHHHHHHHHHhcCCCCCCCCCCH------HHHHH
Q 045127 444 MFDQAEQGLGLGLMCTDQPTGKLPSL------VQIYN 474 (508)
Q Consensus 444 ~~~~~~~l~~l~~~Cl~~dP~~RPs~------~evl~ 474 (508)
.....+.+++.+|++.||.+||++ +|+++
T Consensus 246 --~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 246 --WLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp --TSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred --CCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 123456788999999999999998 77775
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-38 Score=304.65 Aligned_cols=225 Identities=12% Similarity=0.180 Sum_probs=186.0
Q ss_pred hhcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEE
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVT 314 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 314 (508)
..++|+..+.||+|+||.||+|... +++.||+|++.........+.+.+|+.+++.++||||+++++++.++...++||
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 84 (276)
T 2yex_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL 84 (276)
T ss_dssp HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEE
Confidence 3467899999999999999999984 689999999975544445678999999999999999999999999999999999
Q ss_pred eecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC----------
Q 045127 315 EWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY---------- 383 (508)
Q Consensus 315 e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~---------- 383 (508)
||+++++|.+++. ...+++..+..++.|++.||+|||++ |++||||||+||+++.++.+||+|||.+.
T Consensus 85 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 163 (276)
T 2yex_A 85 EYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI-GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 163 (276)
T ss_dssp ECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECC
T ss_pred EecCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCChHHEEEccCCCEEEeeCCCccccCCCcchhc
Confidence 9999999999998 45799999999999999999999999 99999999999999999999999998742
Q ss_pred -------------------C-CCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcc
Q 045127 384 -------------------Q-HRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTEN 443 (508)
Q Consensus 384 -------------------~-~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 443 (508)
. .+.++||||||+++|||++|+.||.........+..+...... ..+ .
T Consensus 164 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~------~~~-~----- 231 (276)
T 2yex_A 164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY------LNP-W----- 231 (276)
T ss_dssp BCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTT------STT-G-----
T ss_pred ccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcccc------cCc-h-----
Confidence 1 1346899999999999999999998654333222222211000 000 0
Q ss_pred hHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 444 MFDQAEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 444 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
......+.+++.+||+.||++|||++|+++
T Consensus 232 -~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 232 -KKIDSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp -GGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred -hhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 112345678999999999999999999986
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-38 Score=321.43 Aligned_cols=245 Identities=16% Similarity=0.187 Sum_probs=191.3
Q ss_pred hcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCC--eeEEE
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRR--TRAIV 313 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~lv 313 (508)
.++|+..+.||+|+||.||+|.+. +|+.||||++.........+.+.+|++++++++||||+++++++.... ..++|
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv 87 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEE
Confidence 457889999999999999999985 589999999975444444677889999999999999999999988654 67999
Q ss_pred EeecCCCCHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEe----cCCCceEEeeccCCCC-
Q 045127 314 TEWTNGGNVELWLSE----SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLL----TDNLEPLISRFKIEYQ- 384 (508)
Q Consensus 314 ~e~~~~gsL~~~l~~----~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll----~~~~~~kl~Dfg~~~~- 384 (508)
|||+++|+|.+++.. ..+++..+..++.|++.||+|||++ ||+||||||+||++ +.++.+||+|||.+..
T Consensus 88 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~ 166 (396)
T 4eut_A 88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN-GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL 166 (396)
T ss_dssp ECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEEEECTTSCEEEEECCGGGCEEC
T ss_pred EecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC-CEEECCcCHHHEEEeecCCCceeEEEecCCCceEc
Confidence 999999999999983 2399999999999999999999999 99999999999999 7788899999987521
Q ss_pred ---------------------------------CCCcchhhHHHHHHHHHHhCCCCCcccccCccc--HHHHHHHhccch
Q 045127 385 ---------------------------------HRSTKYVYKFGLFLLEMITNRRPLEEFERGEAG--FIEYIRMHYPEN 429 (508)
Q Consensus 385 ---------------------------------~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~--~~~~~~~~~~~~ 429 (508)
++.++|||||||++|||++|+.||......... ....+....+..
T Consensus 167 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~ 246 (396)
T 4eut_A 167 EDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSG 246 (396)
T ss_dssp CCGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTT
T ss_pred cCCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCcc
Confidence 234689999999999999999999754432211 111111111111
Q ss_pred h----hhhhhh------cc-cCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhh
Q 045127 430 L----QLVVDE------RM-MLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKS 482 (508)
Q Consensus 430 ~----~~~~~~------~l-~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 482 (508)
. ....+. .+ ............+.+++.+||+.||++|||++|+++.++++...
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~ 310 (396)
T 4eut_A 247 AISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (396)
T ss_dssp CCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred cchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence 0 000000 00 01111234567788999999999999999999999999988764
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-38 Score=316.13 Aligned_cols=228 Identities=13% Similarity=0.146 Sum_probs=184.4
Q ss_pred HhhcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCC-CHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEE
Q 045127 235 AATNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDV-SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAI 312 (508)
Q Consensus 235 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 312 (508)
...++|+..+.||+|+||.||+|... +++.||+|++.... .....+.+.+|+.++++++||||+++++++.++...++
T Consensus 26 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~l 105 (362)
T 2bdw_A 26 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL 105 (362)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred CcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 34578999999999999999999974 68999999997543 34456789999999999999999999999999999999
Q ss_pred EEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCC---CceEEeeccCCC-----
Q 045127 313 VTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDN---LEPLISRFKIEY----- 383 (508)
Q Consensus 313 v~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~---~~~kl~Dfg~~~----- 383 (508)
||||+++|+|.+++. ...+++.++..++.||+.||+|||++ ||+||||||+||+++.+ +.+||+|||++.
T Consensus 106 v~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~-~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~ 184 (362)
T 2bdw_A 106 VFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN-GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 184 (362)
T ss_dssp EECCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTC
T ss_pred EEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEeccCchHHEEEecCCCCCCEEEeecCcceEecCC
Confidence 999999999999887 56789999999999999999999999 99999999999999865 459999998752
Q ss_pred ---------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCc
Q 045127 384 ---------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTE 442 (508)
Q Consensus 384 ---------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 442 (508)
.++.++|||||||++|||++|+.||...... .+...+...... ...+..
T Consensus 185 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~--~~~~~i~~~~~~----~~~~~~---- 254 (362)
T 2bdw_A 185 EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH--RLYAQIKAGAYD----YPSPEW---- 254 (362)
T ss_dssp CSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHTCCC----CCTTGG----
T ss_pred cccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH--HHHHHHHhCCCC----CCcccc----
Confidence 3567899999999999999999999753211 111111111000 000000
Q ss_pred chHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 443 NMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 443 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
......+.+++.+||+.||++|||+.|+++.
T Consensus 255 --~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 255 --DTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp --GGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred --cCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 1123457789999999999999999998764
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-37 Score=310.16 Aligned_cols=227 Identities=14% Similarity=0.185 Sum_probs=183.1
Q ss_pred hhcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCH-----HHHHHHHHHHHHHhhcCCCCccceeeEEecCCe
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSR-----EIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRT 309 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 309 (508)
..+.|+..+.||+|+||.||+|... +|+.||+|++...... ...+.+.+|+.++++++||||+++++++.....
T Consensus 9 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 88 (326)
T 2y0a_A 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTD 88 (326)
T ss_dssp HHHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred cccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCE
Confidence 3456889999999999999999984 6899999999644322 135779999999999999999999999999999
Q ss_pred eEEEEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCC----ceEEeeccCC--
Q 045127 310 RAIVTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNL----EPLISRFKIE-- 382 (508)
Q Consensus 310 ~~lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~----~~kl~Dfg~~-- 382 (508)
.++||||+++|+|.+++. ...+++..+..++.|++.||+|||++ ||+||||||+||+++.++ .+||+|||++
T Consensus 89 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~-~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~ 167 (326)
T 2y0a_A 89 VILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL-QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167 (326)
T ss_dssp EEEEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEESCSSSSSCCEEECCCTTCEE
T ss_pred EEEEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHC-CeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeE
Confidence 999999999999999997 56799999999999999999999999 999999999999999877 8999999874
Q ss_pred ------------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcc
Q 045127 383 ------------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERM 438 (508)
Q Consensus 383 ------------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 438 (508)
..++.++|||||||++|||++|+.||....... ....+...... ... ...
T Consensus 168 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~--~~~~~~~~~~~-~~~---~~~ 241 (326)
T 2y0a_A 168 IDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE--TLANVSAVNYE-FED---EYF 241 (326)
T ss_dssp CCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH--HHHHHHHTCCC-CCH---HHH
T ss_pred CCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH--HHHHHHhcCCC-cCc---ccc
Confidence 234568999999999999999999997432111 11111110000 000 000
Q ss_pred cCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 439 MLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 439 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
......+.+++.+||+.||++|||+.|+++.
T Consensus 242 ------~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 272 (326)
T 2y0a_A 242 ------SNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272 (326)
T ss_dssp ------TTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred ------ccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0113456788999999999999999999873
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-38 Score=312.71 Aligned_cols=235 Identities=17% Similarity=0.276 Sum_probs=192.7
Q ss_pred HHHhhcCCCCCceeeecCCeEEEEEEECC-C-----CEEEEEEecCCCCHHHHHHHHHHHHHHhhc-CCCCccceeeEEe
Q 045127 233 LKAATNGFSKKNLVGKNEGAAIYKGILRD-G-----TRVKIEIYKGDVSREIRDEFVEECKLLVQF-QHKNLIRVLGWNN 305 (508)
Q Consensus 233 l~~~~~~~~~~~~lg~G~~g~V~~~~~~~-~-----~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~ 305 (508)
.....++|+..+.||+|+||.||+|.... + ..||+|.+.........+.+.+|+.+++++ +||||+++++++.
T Consensus 41 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 120 (333)
T 2i1m_A 41 WEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACT 120 (333)
T ss_dssp GBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred ccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEe
Confidence 34456789999999999999999999742 2 479999998766666778899999999999 8999999999999
Q ss_pred cCCeeEEEEeecCCCCHHHHhc---------------cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecC
Q 045127 306 SRRTRAIVTEWTNGGNVELWLS---------------ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTD 370 (508)
Q Consensus 306 ~~~~~~lv~e~~~~gsL~~~l~---------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~ 370 (508)
.++..++||||+++|+|.+++. ...+++..+..++.|++.||+|||++ ||+||||||+||+++.
T Consensus 121 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dlkp~NIl~~~ 199 (333)
T 2i1m_A 121 HGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK-NCIHRDVAARNVLLTN 199 (333)
T ss_dssp SSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGCEEEG
T ss_pred cCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC-CcccCCcccceEEECC
Confidence 9999999999999999999986 23579999999999999999999999 9999999999999999
Q ss_pred CCceEEeeccCCC-----------------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHH
Q 045127 371 NLEPLISRFKIEY-----------------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIE 420 (508)
Q Consensus 371 ~~~~kl~Dfg~~~-----------------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~ 420 (508)
++.+||+|||.+. .++.++||||||+++|||+| |..||....... .+..
T Consensus 200 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~-~~~~ 278 (333)
T 2i1m_A 200 GHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS-KFYK 278 (333)
T ss_dssp GGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSH-HHHH
T ss_pred CCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhH-HHHH
Confidence 9999999998753 23557899999999999999 999997543222 1122
Q ss_pred HHHHhccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhh
Q 045127 421 YIRMHYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKS 482 (508)
Q Consensus 421 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 482 (508)
........ . .. ......+.+++.+||+.||.+|||+.|+++.|+++...
T Consensus 279 ~~~~~~~~--------~--~~---~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~ 327 (333)
T 2i1m_A 279 LVKDGYQM--------A--QP---AFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQE 327 (333)
T ss_dssp HHHHTCCC--------C--CC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHhcCCCC--------C--CC---CCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHh
Confidence 22211110 0 00 01134677899999999999999999999999988664
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-37 Score=322.70 Aligned_cols=228 Identities=11% Similarity=0.101 Sum_probs=184.0
Q ss_pred HhhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCC-HHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEE
Q 045127 235 AATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVS-REIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAI 312 (508)
Q Consensus 235 ~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 312 (508)
...++|+..+.||+|+||.||+|.. .+|+.+|+|++..... ....+.+.+|+.++++++||||+++++++.+++..++
T Consensus 8 ~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 87 (444)
T 3soa_A 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYL 87 (444)
T ss_dssp HHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEE
T ss_pred cccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEE
Confidence 4567899999999999999999997 5689999999975443 3456778999999999999999999999999999999
Q ss_pred EEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEec---CCCceEEeeccCCC-----
Q 045127 313 VTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLT---DNLEPLISRFKIEY----- 383 (508)
Q Consensus 313 v~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~---~~~~~kl~Dfg~~~----- 383 (508)
||||+++|+|.+.+. ...+++..+..++.||+.||+|||++ ||+||||||+||+++ .++.+||+|||++.
T Consensus 88 v~E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~~-givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~ 166 (444)
T 3soa_A 88 IFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQM-GVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGE 166 (444)
T ss_dssp EECCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTT
T ss_pred EEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCHHHEEEeccCCCCcEEEccCceeEEecCC
Confidence 999999999998887 67799999999999999999999999 999999999999998 56889999998752
Q ss_pred ----------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCC
Q 045127 384 ----------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLT 441 (508)
Q Consensus 384 ----------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 441 (508)
.++.++||||+||++|+|++|+.||...... .+...+...... ...+..
T Consensus 167 ~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~--~~~~~i~~~~~~----~~~~~~--- 237 (444)
T 3soa_A 167 QQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQH--RLYQQIKAGAYD----FPSPEW--- 237 (444)
T ss_dssp CCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHHTCCC----CCTTTT---
T ss_pred CceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHH--HHHHHHHhCCCC----CCcccc---
Confidence 3567899999999999999999999743211 111111111000 000000
Q ss_pred cchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 442 ENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 442 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
......+.+++.+||+.||++|||+.|+++.
T Consensus 238 ---~~~s~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 238 ---DTVTPEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp ---TTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred ---ccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 1123457789999999999999999999874
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-37 Score=307.91 Aligned_cols=236 Identities=16% Similarity=0.181 Sum_probs=185.2
Q ss_pred hcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCH-HHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEE
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSR-EIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVT 314 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 314 (508)
.++|+..+.||+|+||.||+|... +|+.||+|++...... ...+.+.+|++++++++||||+++++++...+..++||
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (311)
T 4agu_A 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVF 81 (311)
T ss_dssp -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEE
Confidence 367889999999999999999984 5899999998654433 34677889999999999999999999999999999999
Q ss_pred eecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC-----------
Q 045127 315 EWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE----------- 382 (508)
Q Consensus 315 e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~----------- 382 (508)
||+++++|.+++. ...+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||.+
T Consensus 82 e~~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~-~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 160 (311)
T 4agu_A 82 EYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKH-NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYD 160 (311)
T ss_dssp ECCSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTSCEEECCCTTCEECC-------
T ss_pred EeCCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHC-CCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcccccC
Confidence 9999999999887 66799999999999999999999999 9999999999999999999999999864
Q ss_pred -----------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccc---hhhhhhhh------
Q 045127 383 -----------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPE---NLQLVVDE------ 436 (508)
Q Consensus 383 -----------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~------ 436 (508)
..++.++||||||+++|||++|+.||....... ....+...... ........
T Consensus 161 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (311)
T 4agu_A 161 DEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVD--QLYLIRKTLGDLIPRHQQVFSTNQYFSG 238 (311)
T ss_dssp -----GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH--HHHHHHHHHCSCCHHHHHHHHTCGGGTT
T ss_pred CCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHHhccccccccccccccccccc
Confidence 235678999999999999999999997543221 11111111110 00000000
Q ss_pred -cccCC---cc----hHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 437 -RMMLT---EN----MFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 437 -~l~~~---~~----~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
.+... .. .......+.+++.+||+.||++|||++|+++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 239 VKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp CCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred CcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 00000 00 01124457889999999999999999999864
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-38 Score=306.03 Aligned_cols=231 Identities=20% Similarity=0.300 Sum_probs=191.7
Q ss_pred HhhcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEE
Q 045127 235 AATNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIV 313 (508)
Q Consensus 235 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 313 (508)
...++|+..+.||+|+||.||+|.+. ++..||+|.+..... ..+.+.+|+.++++++||||+++++++.++...++|
T Consensus 10 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v 87 (288)
T 3kfa_A 10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 87 (288)
T ss_dssp CCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCST--HHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEE
T ss_pred ccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCHH--HHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEE
Confidence 35577889999999999999999985 488999999965433 467899999999999999999999999999999999
Q ss_pred EeecCCCCHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-------
Q 045127 314 TEWTNGGNVELWLS---ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------- 383 (508)
Q Consensus 314 ~e~~~~gsL~~~l~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------- 383 (508)
|||+++++|.+++. ...+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||.+.
T Consensus 88 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~-~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~ 166 (288)
T 3kfa_A 88 TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK-NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY 166 (288)
T ss_dssp EECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHH-TCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSS
T ss_pred EEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHC-CccCCCCCcceEEEcCCCCEEEccCccceeccCCcc
Confidence 99999999999997 35589999999999999999999999 99999999999999999999999998742
Q ss_pred ---------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCC
Q 045127 384 ---------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLT 441 (508)
Q Consensus 384 ---------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 441 (508)
.++.++||||||+++|+|++ |..||...... .....+...... ...
T Consensus 167 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~--~~~~~~~~~~~~----------~~~ 234 (288)
T 3kfa_A 167 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYELLEKDYRM----------ERP 234 (288)
T ss_dssp EEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GHHHHHHTTCCC----------CCC
T ss_pred ccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHhccCCC----------CCC
Confidence 23557899999999999999 99999754322 122222211110 000
Q ss_pred cchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhC
Q 045127 442 ENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSC 483 (508)
Q Consensus 442 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 483 (508)
......+.+++.+|++.||.+|||+.|+++.|+.+....
T Consensus 235 ---~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~~ 273 (288)
T 3kfa_A 235 ---EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 273 (288)
T ss_dssp ---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred ---CCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHhc
Confidence 112356778999999999999999999999999887653
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-37 Score=309.19 Aligned_cols=232 Identities=15% Similarity=0.198 Sum_probs=169.7
Q ss_pred hhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEE
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVT 314 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 314 (508)
..++|+..+.||+|+||.||+|.. .+|+.||+|+++..........+.+|++++++++||||+++++++..++..++||
T Consensus 3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 82 (317)
T 2pmi_A 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVF 82 (317)
T ss_dssp ----------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEE
T ss_pred cccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEE
Confidence 356899999999999999999997 4689999999975544434567889999999999999999999999999999999
Q ss_pred eecCCCCHHHHhcc-------CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC----
Q 045127 315 EWTNGGNVELWLSE-------SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY---- 383 (508)
Q Consensus 315 e~~~~gsL~~~l~~-------~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~---- 383 (508)
||++ |+|.+++.. ..+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||.+.
T Consensus 83 e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~-~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 160 (317)
T 2pmi_A 83 EFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN-KILHRDLKPQNLLINKRGQLKLGDFGLARAFGI 160 (317)
T ss_dssp ECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTCCEEECCCSSCEETTS
T ss_pred EecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC-CeeeCCCChHHeEEcCCCCEEECcCccceecCC
Confidence 9998 599998861 4589999999999999999999999 99999999999999999999999998641
Q ss_pred ------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhc--cchh-------
Q 045127 384 ------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHY--PENL------- 430 (508)
Q Consensus 384 ------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~--~~~~------- 430 (508)
.++.++|||||||++|||++|+.||....... .+........ .+..
T Consensus 161 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~ 239 (317)
T 2pmi_A 161 PVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEE-QLKLIFDIMGTPNESLWPSVTKL 239 (317)
T ss_dssp CCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCSCCTTTCGGGGGC
T ss_pred CcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCChhHhhhhhhh
Confidence 35678899999999999999999997543221 1111111100 0000
Q ss_pred ---------------hhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 431 ---------------QLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 431 ---------------~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
...+.+... ......+.+++.+||+.||++|||++|+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 294 (317)
T 2pmi_A 240 PKYNPNIQQRPPRDLRQVLQPHTK-----EPLDGNLMDFLHGLLQLNPDMRLSAKQALHH 294 (317)
T ss_dssp TTCCTTCCCCCCCCSHHHHGGGCS-----SCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred hhcccccccccchhHHHhhccccc-----ccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence 000011000 0113467889999999999999999999874
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-38 Score=314.26 Aligned_cols=226 Identities=15% Similarity=0.164 Sum_probs=175.7
Q ss_pred HhhcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEE
Q 045127 235 AATNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIV 313 (508)
Q Consensus 235 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 313 (508)
...++|+..+.||+|+||.||+|... +++.||||+++... ..+.+.+|+.++++++||||+++++++..+...++|
T Consensus 50 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 126 (349)
T 2w4o_A 50 ALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV---DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLV 126 (349)
T ss_dssp CGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC-------------CHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch---hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEE
Confidence 35578999999999999999999985 58899999997543 346788999999999999999999999999999999
Q ss_pred EeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecC---CCceEEeeccCCC------
Q 045127 314 TEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTD---NLEPLISRFKIEY------ 383 (508)
Q Consensus 314 ~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~---~~~~kl~Dfg~~~------ 383 (508)
|||+++|+|.+++. ...+++.++..++.|++.||+|||+. ||+||||||+||+++. ++.+||+|||++.
T Consensus 127 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~~-~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~ 205 (349)
T 2w4o_A 127 LELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHEN-GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQV 205 (349)
T ss_dssp ECCCCSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEESSSSTTCCEEECCCC---------
T ss_pred EEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCCcccEEEecCCCCCCEEEccCccccccCccc
Confidence 99999999999987 56689999999999999999999999 9999999999999975 8999999998742
Q ss_pred --------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcc
Q 045127 384 --------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTEN 443 (508)
Q Consensus 384 --------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 443 (508)
.++.++|||||||++|||++|+.||.........+.. +..... ....+..
T Consensus 206 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~-i~~~~~----~~~~~~~----- 275 (349)
T 2w4o_A 206 LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRR-ILNCEY----YFISPWW----- 275 (349)
T ss_dssp -------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHH-HHTTCC----CCCTTTT-----
T ss_pred ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHH-HHhCCC----ccCCchh-----
Confidence 3567899999999999999999999754322111111 110000 0000000
Q ss_pred hHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 444 MFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 444 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
......+.+++.+||+.||++|||+.|+++.
T Consensus 276 -~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 306 (349)
T 2w4o_A 276 -DEVSLNAKDLVRKLIVLDPKKRLTTFQALQH 306 (349)
T ss_dssp -TTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred -hhCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1124467789999999999999999999863
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-38 Score=314.65 Aligned_cols=223 Identities=13% Similarity=0.182 Sum_probs=180.5
Q ss_pred hcCCCCCceeeecCCeEEEEEEECCCCEEEEEEecCCC-CHHHHHHHHHHHHHHhhcCC--CCccceeeEEecCCeeEEE
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDV-SREIRDEFVEECKLLVQFQH--KNLIRVLGWNNSRRTRAIV 313 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~lv 313 (508)
.+.|+..+.||+|+||.||+|...+++.||||++.... .....+.+.+|+.++++++| |||+++++++..+...++|
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 87 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 87 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence 45688999999999999999999889999999986443 34456789999999999986 9999999999999999999
Q ss_pred EeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC---------
Q 045127 314 TEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY--------- 383 (508)
Q Consensus 314 ~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~--------- 383 (508)
|| +.+++|.+++. ...+++.++..++.|++.||+|||++ ||+||||||+|||++ ++.+||+|||++.
T Consensus 88 ~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~-~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~~ 164 (343)
T 3dbq_A 88 ME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH-GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSV 164 (343)
T ss_dssp EC-CCSEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC-------
T ss_pred Ee-CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCcceEEEE-CCcEEEeecccccccCcccccc
Confidence 99 56889999998 66789999999999999999999999 999999999999997 6789999998752
Q ss_pred -------------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhh
Q 045127 384 -------------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQL 432 (508)
Q Consensus 384 -------------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (508)
.++.++|||||||++|||++|+.||.........+ ..
T Consensus 165 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~------------~~ 232 (343)
T 3dbq_A 165 VKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL------------HA 232 (343)
T ss_dssp -----CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHH------------HH
T ss_pred cCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHH------------HH
Confidence 23446899999999999999999997532211111 11
Q ss_pred hhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 433 VVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 433 ~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
.+++...... .......+.+++.+||+.||.+|||+.|+++.
T Consensus 233 ~~~~~~~~~~-~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 233 IIDPNHEIEF-PDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp HHCTTSCCCC-CCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HhcCCcccCC-cccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 1111110000 00113457789999999999999999999865
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-37 Score=306.16 Aligned_cols=237 Identities=13% Similarity=0.155 Sum_probs=181.7
Q ss_pred hcCCCCC-ceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhc-CCCCccceeeEEecCCeeEEE
Q 045127 237 TNGFSKK-NLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQF-QHKNLIRVLGWNNSRRTRAIV 313 (508)
Q Consensus 237 ~~~~~~~-~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv 313 (508)
.+.|++. +.||+|+||.||+|.. .+++.||||++..... .....+.+|++++.++ +||||+++++++.+++..++|
T Consensus 11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv 89 (316)
T 2ac3_A 11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPG-HIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLV 89 (316)
T ss_dssp TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSS-CCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcc-hhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEE
Confidence 4567774 7899999999999996 4789999999965432 2467889999999985 799999999999999999999
Q ss_pred EeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCc---eEEeeccCCC------
Q 045127 314 TEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLE---PLISRFKIEY------ 383 (508)
Q Consensus 314 ~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~---~kl~Dfg~~~------ 383 (508)
|||+++|+|.+++. ...+++..+..++.|++.||+|||++ ||+||||||+||+++.++. +||+|||++.
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~ 168 (316)
T 2ac3_A 90 FEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNK-GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNG 168 (316)
T ss_dssp EECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC------
T ss_pred EEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC-CceeCCCCHHHEEEccCCCcCceEEEEccCccccccCC
Confidence 99999999999997 56799999999999999999999999 9999999999999998776 9999998742
Q ss_pred ---------------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHH-HHhccch
Q 045127 384 ---------------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYI-RMHYPEN 429 (508)
Q Consensus 384 ---------------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~-~~~~~~~ 429 (508)
.++.++|||||||++|||++|+.||.............. .......
T Consensus 169 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 248 (316)
T 2ac3_A 169 DCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNM 248 (316)
T ss_dssp -------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHH
T ss_pred ccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHH
Confidence 145678999999999999999999976542221000000 0000000
Q ss_pred -hhhhhhhcccCCcch-HHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 430 -LQLVVDERMMLTENM-FDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 430 -~~~~~~~~l~~~~~~-~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
...+........... ......+.+++.+||+.||++|||+.|+++.
T Consensus 249 ~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 296 (316)
T 2ac3_A 249 LFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQH 296 (316)
T ss_dssp HHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 011111111100000 0124567889999999999999999999873
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-38 Score=316.39 Aligned_cols=230 Identities=13% Similarity=0.170 Sum_probs=182.7
Q ss_pred HHHHhhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCC----CHHHHHHHHHHHHHHhhcCCCCccceeeEEec
Q 045127 232 MLKAATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDV----SREIRDEFVEECKLLVQFQHKNLIRVLGWNNS 306 (508)
Q Consensus 232 ~l~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 306 (508)
++....++|+..+.||+|+||.||+|.. .+++.||+|++.... .....+.+.+|++++++++||||+++++++.+
T Consensus 20 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~ 99 (345)
T 3hko_A 20 SLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYED 99 (345)
T ss_dssp CHHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred hhhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhcc
Confidence 3566778899999999999999999997 568899999986431 23356789999999999999999999999999
Q ss_pred CCeeEEEEeecCCCCHHHHhc-----------------------------------------cCCCCHHHHHHHHHHHHH
Q 045127 307 RRTRAIVTEWTNGGNVELWLS-----------------------------------------ESAPSWKHRLKVLIGVVE 345 (508)
Q Consensus 307 ~~~~~lv~e~~~~gsL~~~l~-----------------------------------------~~~l~~~~~~~i~~~i~~ 345 (508)
.+..++||||+++|+|.+++. ...+++..+..++.|++.
T Consensus 100 ~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~ 179 (345)
T 3hko_A 100 EQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFS 179 (345)
T ss_dssp SSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHH
Confidence 999999999999999999985 112356778899999999
Q ss_pred HHHHHhhCCCccccCCCCCCEEecCCC--ceEEeeccCC---------------------------------CCCCCcch
Q 045127 346 AMCYLQEQWPEVDYDLRTGSVLLTDNL--EPLISRFKIE---------------------------------YQHRSTKY 390 (508)
Q Consensus 346 ~L~~LH~~~~iiH~Dlkp~NIll~~~~--~~kl~Dfg~~---------------------------------~~~~~~~D 390 (508)
||+|||++ +|+||||||+||+++.++ .+||+|||.+ ..++.++|
T Consensus 180 ~l~~LH~~-~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~D 258 (345)
T 3hko_A 180 ALHYLHNQ-GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCD 258 (345)
T ss_dssp HHHHHHHT-TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHH
T ss_pred HHHHHHHC-CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHH
Confidence 99999999 999999999999998776 8999999864 23456899
Q ss_pred hhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhccc-CCcchHHHHHHHHHHHHhcCCCCCCCCCCH
Q 045127 391 VYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMM-LTENMFDQAEQGLGLGLMCTDQPTGKLPSL 469 (508)
Q Consensus 391 v~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~ 469 (508)
||||||++|||++|+.||....... ...... ..... ...........+.+++.+||+.||.+|||+
T Consensus 259 iwslG~il~el~~g~~pf~~~~~~~-~~~~~~------------~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~ 325 (345)
T 3hko_A 259 AWSAGVLLHLLLMGAVPFPGVNDAD-TISQVL------------NKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDA 325 (345)
T ss_dssp HHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHH------------HCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCH
T ss_pred HHHHHHHHHHHHHCCCCCCCCChHH-HHHHHH------------hcccccCCcccccCCHHHHHHHHHHcCCChhHCCCH
Confidence 9999999999999999997543221 111111 11110 000001123567789999999999999999
Q ss_pred HHHHHH
Q 045127 470 VQIYNM 475 (508)
Q Consensus 470 ~evl~~ 475 (508)
.|+++.
T Consensus 326 ~~~l~h 331 (345)
T 3hko_A 326 MRALQH 331 (345)
T ss_dssp HHHHHS
T ss_pred HHHhcC
Confidence 999874
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-37 Score=308.25 Aligned_cols=236 Identities=19% Similarity=0.295 Sum_probs=186.0
Q ss_pred HHHhhcCCCCCceeeecCCeEEEEEEEC----CCCEEEEEEecCCC-CHHHHHHHHHHHHHHhhcCCCCccceeeEEecC
Q 045127 233 LKAATNGFSKKNLVGKNEGAAIYKGILR----DGTRVKIEIYKGDV-SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSR 307 (508)
Q Consensus 233 l~~~~~~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 307 (508)
+....++|...+.||+|+||.||+|... .+..||+|.++... .....+.+.+|+.++++++||||+++++++...
T Consensus 29 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 108 (313)
T 3brb_A 29 VVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEM 108 (313)
T ss_dssp TBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-
T ss_pred cccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeec
Confidence 3445567888899999999999999863 24589999987443 344567899999999999999999999999865
Q ss_pred C-----eeEEEEeecCCCCHHHHhc-------cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceE
Q 045127 308 R-----TRAIVTEWTNGGNVELWLS-------ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPL 375 (508)
Q Consensus 308 ~-----~~~lv~e~~~~gsL~~~l~-------~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~k 375 (508)
. ..++||||+++|+|.+++. ...+++..+..++.|++.||.|||++ ||+||||||+||+++.++.+|
T Consensus 109 ~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~dikp~NIli~~~~~~k 187 (313)
T 3brb_A 109 SSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR-NFLHRDLAARNCMLRDDMTVC 187 (313)
T ss_dssp ------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT-TCCCCCCSGGGEEECTTSCEE
T ss_pred cccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCcceEEEcCCCcEE
Confidence 4 3499999999999999983 35689999999999999999999999 999999999999999999999
Q ss_pred EeeccCCC-----------------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHh
Q 045127 376 ISRFKIEY-----------------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMH 425 (508)
Q Consensus 376 l~Dfg~~~-----------------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~ 425 (508)
|+|||.+. .++.++||||||+++|||++ |+.||....... +...+...
T Consensus 188 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~--~~~~~~~~ 265 (313)
T 3brb_A 188 VADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHE--MYDYLLHG 265 (313)
T ss_dssp ECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG--HHHHHHTT
T ss_pred EeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHH--HHHHHHcC
Confidence 99998753 23457899999999999999 889987543221 22211111
Q ss_pred ccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhCC
Q 045127 426 YPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSCP 484 (508)
Q Consensus 426 ~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 484 (508)
... .. . ......+.+++.+||+.||++|||+.++++.|+++.+..+
T Consensus 266 ~~~--------~~--~---~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~lp 311 (313)
T 3brb_A 266 HRL--------KQ--P---EDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESLP 311 (313)
T ss_dssp CCC--------CC--B---TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC-
T ss_pred CCC--------CC--C---ccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcC
Confidence 100 00 0 1123567889999999999999999999999999988765
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-37 Score=307.79 Aligned_cols=236 Identities=13% Similarity=0.170 Sum_probs=184.8
Q ss_pred hhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCC--CHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCe---
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDV--SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRT--- 309 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~--- 309 (508)
..++|+..+.||+|+||.||+|.. .+++.||||+++... .......+.+|+.++++++||||+++++++.....
T Consensus 10 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~ 89 (311)
T 3ork_A 10 LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGP 89 (311)
T ss_dssp ETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEE
T ss_pred ecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCc
Confidence 356899999999999999999997 578999999997543 33456788999999999999999999999876443
Q ss_pred -eEEEEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC----
Q 045127 310 -RAIVTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY---- 383 (508)
Q Consensus 310 -~~lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~---- 383 (508)
.++||||+++++|.+++. ...+++.++..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||.+.
T Consensus 90 ~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~ 168 (311)
T 3ork_A 90 LPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQN-GIIHRDVKPANIMISATNAVKVMDFGIARAIAD 168 (311)
T ss_dssp EEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEEETTSCEEECCCSCC-----
T ss_pred ccEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CCCcCCCCHHHEEEcCCCCEEEeeccCcccccc
Confidence 499999999999999997 66799999999999999999999999 99999999999999999999999998752
Q ss_pred --------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhc
Q 045127 384 --------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDER 437 (508)
Q Consensus 384 --------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (508)
.++.++||||||+++|||++|+.||........ .......... ......
T Consensus 169 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~-~~~~~~~~~~--~~~~~~-- 243 (311)
T 3ork_A 169 SGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV-AYQHVREDPI--PPSARH-- 243 (311)
T ss_dssp -------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHCCCC--CHHHHS--
T ss_pred cccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHhcCCCC--Cccccc--
Confidence 235578999999999999999999975332111 0111110000 000000
Q ss_pred ccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHH-HHHHHHHHHhhCC
Q 045127 438 MMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQ-IYNMITRAYKSCP 484 (508)
Q Consensus 438 l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~e-vl~~L~~i~~~~~ 484 (508)
......+.+++.+||+.||.+||++.+ +...+.++....+
T Consensus 244 -------~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~~~ 284 (311)
T 3ork_A 244 -------EGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEP 284 (311)
T ss_dssp -------TTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHTTCC
T ss_pred -------CCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHhcCCC
Confidence 012345778999999999999996555 5556666655443
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-38 Score=306.06 Aligned_cols=236 Identities=14% Similarity=0.172 Sum_probs=180.7
Q ss_pred cCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCC-HHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEe
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVS-REIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTE 315 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 315 (508)
++|+..+.||+|+||+||+|... +++.||+|++..... ......+.+|+.++++++||||+++++++.++...++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 57889999999999999999984 689999999974432 3346778999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC----------
Q 045127 316 WTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY---------- 383 (508)
Q Consensus 316 ~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~---------- 383 (508)
|+++ ++.+.+. ...+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||.+.
T Consensus 82 ~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~-~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 159 (292)
T 3o0g_A 82 FCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR-NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYS 159 (292)
T ss_dssp CCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSCCC
T ss_pred cCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEcCCCCEEEeecccceecCCcccccc
Confidence 9986 5555544 57899999999999999999999999 99999999999999999999999998741
Q ss_pred ------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccch---hhhhh---hhc--
Q 045127 384 ------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPEN---LQLVV---DER-- 437 (508)
Q Consensus 384 ------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~---~~~~~---~~~-- 437 (508)
.++.++|||||||++|||++|..||.........+........... ..... +..
T Consensus 160 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 239 (292)
T 3o0g_A 160 AEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPY 239 (292)
T ss_dssp SCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCC
T ss_pred CCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhccccccccc
Confidence 2577899999999999999998886533322222222222111100 00000 000
Q ss_pred ------ccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 438 ------MMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 438 ------l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
.............+.+++.+|++.||++|||++|+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 283 (292)
T 3o0g_A 240 PMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp CCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 00000001124567789999999999999999999863
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-38 Score=334.90 Aligned_cols=231 Identities=19% Similarity=0.311 Sum_probs=190.2
Q ss_pred HhhcCCCCCceeeecCCeEEEEEEECCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEE
Q 045127 235 AATNGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVT 314 (508)
Q Consensus 235 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 314 (508)
...++|+..+.||+|+||.||+|.+.++..||||+++.... ..+.|.+|++++++++||||+++++++.+ +..++||
T Consensus 264 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~ 340 (535)
T 2h8h_A 264 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM--SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 340 (535)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSS--CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEE
T ss_pred cchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCC--CHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEee
Confidence 34567888999999999999999998788899999975433 34679999999999999999999999876 6789999
Q ss_pred eecCCCCHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC--------
Q 045127 315 EWTNGGNVELWLS---ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY-------- 383 (508)
Q Consensus 315 e~~~~gsL~~~l~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~-------- 383 (508)
||+++|+|.+++. ...+++.++..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||++.
T Consensus 341 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~ 419 (535)
T 2h8h_A 341 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM-NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 419 (535)
T ss_dssp CCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHH
T ss_pred ehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCCHhhEEEcCCCcEEEcccccceecCCCcee
Confidence 9999999999997 35699999999999999999999999 99999999999999999999999999853
Q ss_pred --------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCc
Q 045127 384 --------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTE 442 (508)
Q Consensus 384 --------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 442 (508)
.++.++|||||||++|||++ |+.||......+ +...+.... .+...
T Consensus 420 ~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~--~~~~i~~~~----------~~~~~- 486 (535)
T 2h8h_A 420 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE--VLDQVERGY----------RMPCP- 486 (535)
T ss_dssp TTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHH--HHHHHHTTC----------CCCCC-
T ss_pred cccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHcCC----------CCCCC-
Confidence 23557899999999999999 999997543211 111111111 01001
Q ss_pred chHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhCC
Q 045127 443 NMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSCP 484 (508)
Q Consensus 443 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 484 (508)
......+.+++.+||+.||++|||+++|++.|+++.....
T Consensus 487 --~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~~ 526 (535)
T 2h8h_A 487 --PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE 526 (535)
T ss_dssp --TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCCS
T ss_pred --CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhccC
Confidence 1224567789999999999999999999999998865543
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-38 Score=306.54 Aligned_cols=235 Identities=17% Similarity=0.255 Sum_probs=187.6
Q ss_pred HHhhcCCCCCc-eeeecCCeEEEEEEE---CCCCEEEEEEecCCCC-HHHHHHHHHHHHHHhhcCCCCccceeeEEecCC
Q 045127 234 KAATNGFSKKN-LVGKNEGAAIYKGIL---RDGTRVKIEIYKGDVS-REIRDEFVEECKLLVQFQHKNLIRVLGWNNSRR 308 (508)
Q Consensus 234 ~~~~~~~~~~~-~lg~G~~g~V~~~~~---~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 308 (508)
....++|+..+ .||+|+||.||+|.+ .+++.||||+++.... ....+.+.+|++++++++||||+++++++ ..+
T Consensus 12 ~~~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~ 90 (291)
T 1xbb_A 12 YLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAE 90 (291)
T ss_dssp BCCGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESS
T ss_pred eecchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCC
Confidence 33446777777 999999999999965 3468899999975432 23467899999999999999999999999 556
Q ss_pred eeEEEEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCCC---
Q 045127 309 TRAIVTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEYQ--- 384 (508)
Q Consensus 309 ~~~lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~--- 384 (508)
..++||||+++++|.+++. ...+++..+..++.|++.||+|||++ |++||||||+||+++.++.+||+|||.+..
T Consensus 91 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~-~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 169 (291)
T 1xbb_A 91 SWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES-NFVHRDLAARNVLLVTQHYAKISDFGLSKALRA 169 (291)
T ss_dssp SEEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEEETTEEEECCCTTCEECCT
T ss_pred CcEEEEEeCCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHhC-CeEcCCCCcceEEEeCCCcEEEccCCcceeecc
Confidence 7899999999999999998 55699999999999999999999999 999999999999999999999999987521
Q ss_pred ---------------------------CCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhh
Q 045127 385 ---------------------------HRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDE 436 (508)
Q Consensus 385 ---------------------------~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (508)
++.++||||||+++|||++ |+.||...... .+...+..... +
T Consensus 170 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~~~~~~~~--------~ 239 (291)
T 1xbb_A 170 DENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS--EVTAMLEKGER--------M 239 (291)
T ss_dssp TCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HHHHHHHTTCC--------C
T ss_pred CCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHH--HHHHHHHcCCC--------C
Confidence 2347899999999999999 99999754321 11211111110 0
Q ss_pred cccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhCCC
Q 045127 437 RMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSCPI 485 (508)
Q Consensus 437 ~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~ 485 (508)
.. . ......+.+++.+||+.||++|||+.++++.|+++......
T Consensus 240 ~~--~---~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~ 283 (291)
T 1xbb_A 240 GC--P---AGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVN 283 (291)
T ss_dssp CC--C---TTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHHH
T ss_pred CC--C---CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhh
Confidence 00 0 11245678899999999999999999999999999776443
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-38 Score=310.66 Aligned_cols=218 Identities=14% Similarity=0.116 Sum_probs=175.1
Q ss_pred cCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCC-CHHHHHHHHHHHHHHhhc-CCCCccceeeEEecCCeeEEEE
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDV-SREIRDEFVEECKLLVQF-QHKNLIRVLGWNNSRRTRAIVT 314 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~ 314 (508)
++|+..++||+|+||+||+|... +++.||||++.... ..........|+..+.++ +||||+++++++.+++..++||
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~ 136 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT 136 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence 67999999999999999999985 79999999986443 333455566677666665 8999999999999999999999
Q ss_pred eecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC----------
Q 045127 315 EWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE---------- 382 (508)
Q Consensus 315 e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~---------- 382 (508)
||+ +++|.+++. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 137 e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~~~~ 214 (311)
T 3p1a_A 137 ELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQ-GLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGE 214 (311)
T ss_dssp ECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECGGGCEEECCCTTCEECC------
T ss_pred ecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CEecCCCCHHHEEECCCCCEEEccceeeeecccCCCCc
Confidence 999 679998887 56799999999999999999999999 9999999999999999999999999874
Q ss_pred ---------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHH
Q 045127 383 ---------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQ 447 (508)
Q Consensus 383 ---------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 447 (508)
+.++.++|||||||++|||++|..|+.... .... + ..........+ ..
T Consensus 215 ~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~----~~~~-~---~~~~~~~~~~~---------~~ 277 (311)
T 3p1a_A 215 VQEGDPRYMAPELLQGSYGTAADVFSLGLTILEVACNMELPHGGE----GWQQ-L---RQGYLPPEFTA---------GL 277 (311)
T ss_dssp CCCCCGGGCCGGGGGTCCSTHHHHHHHHHHHHHHHHTCCCCSSHH----HHHH-H---TTTCCCHHHHT---------TS
T ss_pred ccCCCccccCHhHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcc----HHHH-H---hccCCCccccc---------CC
Confidence 234678899999999999999976654311 0110 0 00000000011 12
Q ss_pred HHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 448 AEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 448 ~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
...+.+++.+||+.||++|||++|+++
T Consensus 278 ~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 278 SSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp CHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 456788999999999999999999986
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-38 Score=317.00 Aligned_cols=249 Identities=18% Similarity=0.221 Sum_probs=182.9
Q ss_pred hhcCCCCCceeeecCCeEEEEEEECCCCEEEEEEecCCCCHHHHHHHHHHHHH--HhhcCCCCccceeeEEec-----CC
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKL--LVQFQHKNLIRVLGWNNS-----RR 308 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~--l~~l~h~niv~~~~~~~~-----~~ 308 (508)
..++|+..+.||+|+||.||+|+. +++.||||++.... ...+..|.++ +..++||||+++++++.. ..
T Consensus 11 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~----~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 85 (336)
T 3g2f_A 11 DLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN----RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRM 85 (336)
T ss_dssp CTTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCE
T ss_pred ChHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc----hhhHHHHHHHHHHHhccCcchhhheecccccccCCCc
Confidence 457899999999999999999987 58999999996432 2334444444 556899999999986542 23
Q ss_pred eeEEEEeecCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCC--------CccccCCCCCCEEecCCCceEEeecc
Q 045127 309 TRAIVTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQW--------PEVDYDLRTGSVLLTDNLEPLISRFK 380 (508)
Q Consensus 309 ~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~--------~iiH~Dlkp~NIll~~~~~~kl~Dfg 380 (508)
..++||||+++|+|.+++.....++..+..++.|++.||+|||+.+ ||+||||||+|||++.++.+||+|||
T Consensus 86 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG 165 (336)
T 3g2f_A 86 EYLLVMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFG 165 (336)
T ss_dssp EEEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCT
T ss_pred eEEEEEecCCCCcHHHHHhhcccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeecc
Confidence 5689999999999999999778899999999999999999999874 89999999999999999999999999
Q ss_pred CCCC------------------------------------------CCCcchhhHHHHHHHHHHhCCCCCcccccCcccH
Q 045127 381 IEYQ------------------------------------------HRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGF 418 (508)
Q Consensus 381 ~~~~------------------------------------------~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~ 418 (508)
++.. ++.++|||||||++|||++|..||..........
T Consensus 166 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~ 245 (336)
T 3g2f_A 166 LSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQ 245 (336)
T ss_dssp TCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCC
T ss_pred ceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHH
Confidence 8631 1135799999999999999987765432111100
Q ss_pred HHHHHHhc-cc---hhhhhhh-----hccc-CCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhCCCCCC
Q 045127 419 IEYIRMHY-PE---NLQLVVD-----ERMM-LTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSCPILTS 488 (508)
Q Consensus 419 ~~~~~~~~-~~---~~~~~~~-----~~l~-~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~ 488 (508)
..+..... .. .....+. +.+. ...........+.+++.+||+.||++|||+.|+++.|+++...+.....
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~~~~~ 325 (336)
T 3g2f_A 246 MAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWERNKS 325 (336)
T ss_dssp CTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCCC---
T ss_pred HhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHHhccc
Confidence 00000000 00 0111111 1110 0111123466789999999999999999999999999999988877655
Q ss_pred C
Q 045127 489 E 489 (508)
Q Consensus 489 ~ 489 (508)
.
T Consensus 326 ~ 326 (336)
T 3g2f_A 326 V 326 (336)
T ss_dssp -
T ss_pred C
Confidence 4
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-38 Score=314.59 Aligned_cols=222 Identities=14% Similarity=0.184 Sum_probs=180.7
Q ss_pred hhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCH--HHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEE
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSR--EIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAI 312 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 312 (508)
..++|...+.||+|+||.||+|.+ .+++.||+|++...... .....+.+|+.+++.++||||+++++++..+...++
T Consensus 7 ~i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 86 (336)
T 3h4j_B 7 HIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVM 86 (336)
T ss_dssp EETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ccCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 357899999999999999999997 57899999998643211 123578899999999999999999999999999999
Q ss_pred EEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCCC-------
Q 045127 313 VTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEYQ------- 384 (508)
Q Consensus 313 v~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~------- 384 (508)
||||+ +|+|.+++. ...+++.++..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++..
T Consensus 87 v~E~~-~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~-givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~~~ 164 (336)
T 3h4j_B 87 VIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRH-KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFL 164 (336)
T ss_dssp EECCC-CEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHH-TCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSBTT
T ss_pred EEECC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCchhhEEEcCCCCEEEEEeccceeccCCccc
Confidence 99999 678888876 67899999999999999999999999 999999999999999999999999997521
Q ss_pred --------------------CCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcch
Q 045127 385 --------------------HRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENM 444 (508)
Q Consensus 385 --------------------~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 444 (508)
.+.++|||||||++|+|++|+.||+....... ... +.........
T Consensus 165 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~----------~~~---i~~~~~~~p~-- 229 (336)
T 3h4j_B 165 KTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL----------FKK---VNSCVYVMPD-- 229 (336)
T ss_dssp CCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTC----------BCC---CCSSCCCCCT--
T ss_pred ccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHH----------HHH---HHcCCCCCcc--
Confidence 14578999999999999999999975432110 000 0000000001
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 445 FDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 445 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
.....+.+++.+||+.||.+|||++|+++.
T Consensus 230 -~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 230 -FLSPGAQSLIRRMIVADPMQRITIQEIRRD 259 (336)
T ss_dssp -TSCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred -cCCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 123456789999999999999999999875
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-37 Score=313.34 Aligned_cols=223 Identities=13% Similarity=0.164 Sum_probs=178.8
Q ss_pred hcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCC----CHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeE
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDV----SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRA 311 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 311 (508)
.+.|+..+.||+|+||.||+|.. .+++.||||++.... .....+.+.+|+.+++.++||||+++++++.+++..+
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 102 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 45789999999999999999997 468999999985321 1113577899999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCc---eEEeeccCC-
Q 045127 312 IVTEWTNGGNVELWLS-----ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLE---PLISRFKIE- 382 (508)
Q Consensus 312 lv~e~~~~gsL~~~l~-----~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~---~kl~Dfg~~- 382 (508)
+||||+++|+|.+++. ...+++..+..++.||+.||+|||++ ||+||||||+||+++.++. +||+|||++
T Consensus 103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~ 181 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN-NIIHRDVKPHCVLLASKENSAPVKLGGFGVAI 181 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECSSSTTCCEEECCCTTCE
T ss_pred EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCChHHeEEecCCCCCcEEEecCccee
Confidence 9999999999988775 23589999999999999999999999 9999999999999986654 999999874
Q ss_pred --------------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhh
Q 045127 383 --------------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDE 436 (508)
Q Consensus 383 --------------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (508)
..++.++|||||||++|||++|+.||..... .+...+. ..
T Consensus 182 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~---~~~~~i~-----------~~ 247 (351)
T 3c0i_A 182 QLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE---RLFEGII-----------KG 247 (351)
T ss_dssp ECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH---HHHHHHH-----------HT
T ss_pred EecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH---HHHHHHH-----------cC
Confidence 1356789999999999999999999975311 1111111 11
Q ss_pred cccCCcc-hHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 437 RMMLTEN-MFDQAEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 437 ~l~~~~~-~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
....... .......+.+++.+||+.||++|||+.|+++
T Consensus 248 ~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 248 KYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp CCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCCCCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 1100000 0012456778999999999999999999986
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-37 Score=334.72 Aligned_cols=224 Identities=19% Similarity=0.299 Sum_probs=185.4
Q ss_pred eeeecCCeEEEEEEEC---CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEeecCCCC
Q 045127 245 LVGKNEGAAIYKGILR---DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWTNGGN 321 (508)
Q Consensus 245 ~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gs 321 (508)
.||+|+||.||+|.+. ++..||||+++........+.+.+|++++++++||||+++++++.. +..++||||+++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 7999999999999873 4567999999765544567889999999999999999999999976 56899999999999
Q ss_pred HHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC----------------
Q 045127 322 VELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY---------------- 383 (508)
Q Consensus 322 L~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~---------------- 383 (508)
|.+++. ...+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||++.
T Consensus 422 L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~ 500 (613)
T 2ozo_A 422 LHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK-NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGK 500 (613)
T ss_dssp HHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-------------
T ss_pred HHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC-CEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccCCC
Confidence 999997 45689999999999999999999999 99999999999999999999999999753
Q ss_pred --------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHH
Q 045127 384 --------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQA 448 (508)
Q Consensus 384 --------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 448 (508)
.++.++|||||||++|||++ |+.||...... .+...+.... .+... ....
T Consensus 501 ~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~--~~~~~i~~~~----------~~~~p---~~~~ 565 (613)
T 2ozo_A 501 WPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP--EVMAFIEQGK----------RMECP---PECP 565 (613)
T ss_dssp -CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSH--HHHHHHHTTC----------CCCCC---TTCC
T ss_pred CccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHH--HHHHHHHcCC----------CCCCC---CcCC
Confidence 23457899999999999998 99999754322 1222222111 01111 1224
Q ss_pred HHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhCCC
Q 045127 449 EQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSCPI 485 (508)
Q Consensus 449 ~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~ 485 (508)
..+.+++.+||+.||++|||+.+|++.|+.+......
T Consensus 566 ~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~~~ 602 (613)
T 2ozo_A 566 PELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLAS 602 (613)
T ss_dssp HHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHhcc
Confidence 5678899999999999999999999999998776543
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-37 Score=302.71 Aligned_cols=223 Identities=15% Similarity=0.213 Sum_probs=183.1
Q ss_pred hhcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCH--HHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEE
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSR--EIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAI 312 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 312 (508)
+.++|+..+.||+|+||.||+|... +++.||+|++...... .....+.+|+.++++++||||+++++++.+....++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 86 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL 86 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEE
Confidence 4578999999999999999999974 5789999998543221 125678899999999999999999999999999999
Q ss_pred EEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC---------
Q 045127 313 VTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE--------- 382 (508)
Q Consensus 313 v~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~--------- 382 (508)
||||+++|+|.+++. ...+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||.+
T Consensus 87 v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~-~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~~~ 165 (279)
T 3fdn_A 87 ILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT 165 (279)
T ss_dssp EECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTT-TCEECCCCGGGEEECTTSCEEECSCCEESCC------
T ss_pred EEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC-CEecccCChHhEEEcCCCCEEEEeccccccCCccccc
Confidence 999999999999987 57799999999999999999999999 9999999999999999999999999863
Q ss_pred ----------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHH
Q 045127 383 ----------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFD 446 (508)
Q Consensus 383 ----------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 446 (508)
..++.++||||||+++|+|++|+.||....... ....+.. ....... .
T Consensus 166 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~-----------~~~~~~~---~ 229 (279)
T 3fdn_A 166 DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE--TYKRISR-----------VEFTFPD---F 229 (279)
T ss_dssp --CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH--HHHHHHH-----------TCCCCCT---T
T ss_pred ccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHH--HHHHHHh-----------CCCCCCC---c
Confidence 234678999999999999999999997432111 1111110 0110011 1
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 447 QAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 447 ~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
....+.+++.+||+.||.+|||+.|+++.
T Consensus 230 ~~~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 230 VTEGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp SCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred CCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 13456788999999999999999999986
|
| >4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-37 Score=303.97 Aligned_cols=235 Identities=13% Similarity=0.167 Sum_probs=182.3
Q ss_pred HhhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEE-ecCCeeEE
Q 045127 235 AATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWN-NSRRTRAI 312 (508)
Q Consensus 235 ~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~-~~~~~~~l 312 (508)
...++|+..+.||+|+||.||+|.. .+++.||||++..... ...+.+|+.+++.++|++++..++++ ......++
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~l 82 (296)
T 4hgt_A 6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK---HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVM 82 (296)
T ss_dssp -----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC------CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEE
T ss_pred ccCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc---chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEE
Confidence 4567899999999999999999997 5789999998754322 24578899999999988877776655 56778899
Q ss_pred EEeecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEe---cCCCceEEeeccCCC----
Q 045127 313 VTEWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLL---TDNLEPLISRFKIEY---- 383 (508)
Q Consensus 313 v~e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll---~~~~~~kl~Dfg~~~---- 383 (508)
||||+ +++|.+++. ...+++..+..++.|++.||+|||++ ||+||||||+||++ +.++.+||+|||.+.
T Consensus 83 v~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~-~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~ 160 (296)
T 4hgt_A 83 VMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK-NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 160 (296)
T ss_dssp EEECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred EEEcc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHeeeeccCCCCeEEEecCccceeccC
Confidence 99999 999999997 66799999999999999999999999 99999999999999 788999999998752
Q ss_pred ------------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCc--ccHHHHHHHhccchhh
Q 045127 384 ------------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGE--AGFIEYIRMHYPENLQ 431 (508)
Q Consensus 384 ------------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~--~~~~~~~~~~~~~~~~ 431 (508)
.++.++|||||||++|||++|+.||....... ..+.............
T Consensus 161 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (296)
T 4hgt_A 161 ARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIE 240 (296)
T ss_dssp TTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHH
T ss_pred cccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchhh
Confidence 23457899999999999999999998654322 1111111111100000
Q ss_pred hhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhCC
Q 045127 432 LVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSCP 484 (508)
Q Consensus 432 ~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 484 (508)
.... .....+.+++.+||+.||++|||++++++.|+++..+..
T Consensus 241 -~~~~---------~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~ 283 (296)
T 4hgt_A 241 -VLCK---------GYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG 283 (296)
T ss_dssp -HHTT---------TSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHT
T ss_pred -hhhc---------cCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhC
Confidence 0000 113567889999999999999999999999999987654
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-37 Score=301.91 Aligned_cols=235 Identities=13% Similarity=0.162 Sum_probs=186.6
Q ss_pred hhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEE-ecCCeeEEE
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWN-NSRRTRAIV 313 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~-~~~~~~~lv 313 (508)
..++|+..+.||+|+||.||+|.. .+++.||+|++...... +.+.+|+.+++.++|++++..++++ ......++|
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 83 (296)
T 3uzp_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH---PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMV 83 (296)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSC---CHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEE
T ss_pred eccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcch---hHHHHHHHHHHHhhcCCCCCccccccCCCCceEEE
Confidence 457899999999999999999997 67899999998654332 4688999999999988877666655 566788999
Q ss_pred EeecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEe---cCCCceEEeeccCCC-----
Q 045127 314 TEWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLL---TDNLEPLISRFKIEY----- 383 (508)
Q Consensus 314 ~e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll---~~~~~~kl~Dfg~~~----- 383 (508)
|||+ +++|.+++. ...+++..+..++.|++.||+|||++ ||+||||||+||++ +.++.+||+|||.+.
T Consensus 84 ~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~ 161 (296)
T 3uzp_A 84 MELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK-NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDA 161 (296)
T ss_dssp EECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred EEec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhC-CeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccc
Confidence 9999 899999997 66799999999999999999999999 99999999999999 488999999998742
Q ss_pred -----------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCc-cc-HHHHHHHhccchhhh
Q 045127 384 -----------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGE-AG-FIEYIRMHYPENLQL 432 (508)
Q Consensus 384 -----------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~-~~-~~~~~~~~~~~~~~~ 432 (508)
.++.++|||||||++|||++|+.||....... .. +............ .
T Consensus 162 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-~ 240 (296)
T 3uzp_A 162 RTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI-E 240 (296)
T ss_dssp TTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH-H
T ss_pred ccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCch-H
Confidence 23457899999999999999999998644221 11 1111111110000 0
Q ss_pred hhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhCCC
Q 045127 433 VVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSCPI 485 (508)
Q Consensus 433 ~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~ 485 (508)
...+ .....+.+++.+||+.||++|||++++++.|+++......
T Consensus 241 ~~~~---------~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~ 284 (296)
T 3uzp_A 241 VLCK---------GYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGF 284 (296)
T ss_dssp HHTT---------TSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred HHHh---------hCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcCC
Confidence 0001 1135678899999999999999999999999999887654
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-37 Score=312.64 Aligned_cols=223 Identities=17% Similarity=0.200 Sum_probs=181.1
Q ss_pred hcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCC--CHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEE
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDV--SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIV 313 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 313 (508)
.+.|+..+.||+|+||.||+|.. .+++.||||++.... .....+.+.+|++++++++||||+++++++..++..++|
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 132 (348)
T 1u5q_A 53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV 132 (348)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEE
Confidence 34588889999999999999997 578999999996543 233457799999999999999999999999999999999
Q ss_pred EeecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC---------
Q 045127 314 TEWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE--------- 382 (508)
Q Consensus 314 ~e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~--------- 382 (508)
|||++ |+|.+++. ...+++.++..++.|+++||+|||++ ||+||||||+||+++.++.+||+|||.+
T Consensus 133 ~e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~ 210 (348)
T 1u5q_A 133 MEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH-NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSF 210 (348)
T ss_dssp EECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCCC
T ss_pred EecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC-CeeeCCCCHHHEEECCCCCEEEeeccCceecCCCCcc
Confidence 99997 58888775 67899999999999999999999999 9999999999999999999999999874
Q ss_pred -----------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchH
Q 045127 383 -----------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMF 445 (508)
Q Consensus 383 -----------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 445 (508)
..++.++|||||||++|||++|+.||....... .+...... ..+.... .
T Consensus 211 ~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~-~~~~~~~~---------~~~~~~~----~ 276 (348)
T 1u5q_A 211 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-ALYHIAQN---------ESPALQS----G 276 (348)
T ss_dssp CSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHHHS---------CCCCCCC----T
T ss_pred cCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHhc---------CCCCCCC----C
Confidence 235678999999999999999999997532111 01111110 0111110 0
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 446 DQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 446 ~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
.....+.+++.+||+.||++|||++++++.
T Consensus 277 ~~~~~l~~li~~~l~~dP~~Rps~~~ll~h 306 (348)
T 1u5q_A 277 HWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 306 (348)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred CCCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 113456788999999999999999999865
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-37 Score=308.42 Aligned_cols=222 Identities=13% Similarity=0.157 Sum_probs=176.4
Q ss_pred hcCCCCCceeeecCCeEEEEEEE----CCCCEEEEEEecCCCC---HHHHHHHHHHHHHHhhcCCCCccceeeEEecCCe
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGIL----RDGTRVKIEIYKGDVS---REIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRT 309 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~----~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 309 (508)
.++|+..+.||+|+||.||+|+. .+++.||+|+++.... ......+.+|+.++++++||||+++++++...+.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 46799999999999999999997 4689999999975432 2235668899999999999999999999999999
Q ss_pred eEEEEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-----
Q 045127 310 RAIVTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY----- 383 (508)
Q Consensus 310 ~~lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~----- 383 (508)
.++||||+++|+|.+++. ...+++..+..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||++.
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~-~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 174 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQK-GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHD 174 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCTTTEEECTTSCEEECCCSCC------
T ss_pred EEEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhC-CEEcccCCHHHeEECCCCcEEEEeCCcccccccC
Confidence 999999999999999998 56789999999999999999999999 99999999999999999999999998642
Q ss_pred ----------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCC
Q 045127 384 ----------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLT 441 (508)
Q Consensus 384 ----------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 441 (508)
.++.++|||||||++|||++|+.||....... . .. .+........
T Consensus 175 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~--~---~~--------~i~~~~~~~p 241 (327)
T 3a62_A 175 GTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKK--T---ID--------KILKCKLNLP 241 (327)
T ss_dssp ----CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH--H---HH--------HHHHTCCCCC
T ss_pred CccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHH--H---HH--------HHHhCCCCCC
Confidence 24567899999999999999999997532211 1 11 1111111111
Q ss_pred cchHHHHHHHHHHHHhcCCCCCCCCC-----CHHHHHHH
Q 045127 442 ENMFDQAEQGLGLGLMCTDQPTGKLP-----SLVQIYNM 475 (508)
Q Consensus 442 ~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~ 475 (508)
. .....+.+++.+||+.||++|| ++.|+++.
T Consensus 242 ~---~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~h 277 (327)
T 3a62_A 242 P---YLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAH 277 (327)
T ss_dssp T---TSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHS
T ss_pred C---CCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcC
Confidence 1 1134577889999999999999 78888764
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-37 Score=313.40 Aligned_cols=227 Identities=14% Similarity=0.118 Sum_probs=181.0
Q ss_pred hhcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEE
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVT 314 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 314 (508)
..++|+..+.||+|+||.||+|+.. +++.||+|++..... ..+.+.+|+.++++++||||+++++++.++...++||
T Consensus 18 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 95 (361)
T 3uc3_A 18 DSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA--IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIM 95 (361)
T ss_dssp CTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT--SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc--ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEE
Confidence 4568999999999999999999985 789999999965432 2356889999999999999999999999999999999
Q ss_pred eecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCc--eEEeeccCCC--------
Q 045127 315 EWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLE--PLISRFKIEY-------- 383 (508)
Q Consensus 315 e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~--~kl~Dfg~~~-------- 383 (508)
||+++|+|.+++. ...+++..+..++.|++.||+|||++ ||+||||||+||+++.++. +||+|||++.
T Consensus 96 e~~~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~~-~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~~~ 174 (361)
T 3uc3_A 96 EYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSM-QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP 174 (361)
T ss_dssp ECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT-TCCSCCCCGGGEEECSSSSCCEEECCCCCC---------
T ss_pred EeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEEcCCCCceEEEeecCccccccccCCC
Confidence 9999999999987 67899999999999999999999999 9999999999999987765 9999999753
Q ss_pred ------------------CCC-CcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcch
Q 045127 384 ------------------QHR-STKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENM 444 (508)
Q Consensus 384 ------------------~~~-~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 444 (508)
.++ .++|||||||++|||++|+.||....... ......... ......... .
T Consensus 175 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~-~~~~~~~~~--------~~~~~~~~~-~ 244 (361)
T 3uc3_A 175 KSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPR-DYRKTIQRI--------LSVKYSIPD-D 244 (361)
T ss_dssp ------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CC-CHHHHHHHH--------HTTCCCCCT-T
T ss_pred CCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHH-HHHHHHHHH--------hcCCCCCCC-c
Confidence 112 23899999999999999999997543222 122222111 111110000 0
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 445 FDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 445 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
......+.+++.+||+.||++|||+.|+++.
T Consensus 245 ~~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 245 IRISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp SCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred CCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 0113457789999999999999999999875
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-37 Score=306.76 Aligned_cols=232 Identities=13% Similarity=0.157 Sum_probs=182.0
Q ss_pred hcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcC-CCCccceeeEEec--CCeeEE
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQ-HKNLIRVLGWNNS--RRTRAI 312 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~--~~~~~l 312 (508)
.++|+..+.||+|+||.||+|.. .+++.||+|+++.. ..+.+.+|+.++++++ ||||+++++++.. ....++
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~l 110 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV----KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPAL 110 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC----CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEE
T ss_pred CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc----chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEE
Confidence 36789999999999999999997 57899999999643 2467889999999997 9999999999987 567899
Q ss_pred EEeecCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCC-ceEEeeccCC---------
Q 045127 313 VTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNL-EPLISRFKIE--------- 382 (508)
Q Consensus 313 v~e~~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~-~~kl~Dfg~~--------- 382 (508)
||||+++++|.+++. .+++.++..++.|++.||+|||++ ||+||||||+||+++.++ .+||+|||.+
T Consensus 111 v~e~~~~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~ 187 (330)
T 3nsz_A 111 VFEHVNNTDFKQLYQ--TLTDYDIRFYMYEILKALDYCHSM-GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY 187 (330)
T ss_dssp EEECCCCCCHHHHGG--GCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCCC
T ss_pred EEeccCchhHHHHHH--hCCHHHHHHHHHHHHHHHHHHHhC-CeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCcc
Confidence 999999999999985 589999999999999999999999 999999999999999776 8999999875
Q ss_pred ------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcc------
Q 045127 383 ------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERM------ 438 (508)
Q Consensus 383 ------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l------ 438 (508)
..++.++|||||||++|||++|+.||.........+.........+...+.++..-
T Consensus 188 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (330)
T 3nsz_A 188 NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPR 267 (330)
T ss_dssp CSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTH
T ss_pred ccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccccc
Confidence 23567899999999999999999999654332222222222111111111111100
Q ss_pred ----------------cCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 439 ----------------MLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 439 ----------------~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
............+.+++.+||+.||++|||++|+++.
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h 320 (330)
T 3nsz_A 268 FNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 320 (330)
T ss_dssp HHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred hhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 0000001125678889999999999999999999873
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-37 Score=308.21 Aligned_cols=222 Identities=15% Similarity=0.151 Sum_probs=182.8
Q ss_pred hcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCH--HHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEE
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSR--EIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIV 313 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 313 (508)
.++|+..+.||+|+||.||+|+.. +|+.||+|+++..... ...+.+.+|..+++.++||||+++++++.+....++|
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 467889999999999999999974 6899999999643211 2356788999999999999999999999999999999
Q ss_pred EeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC----------
Q 045127 314 TEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE---------- 382 (508)
Q Consensus 314 ~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~---------- 382 (508)
|||+++|+|.+++. ...+++..+..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||++
T Consensus 85 ~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~~~~~ 163 (318)
T 1fot_A 85 MDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSK-DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTL 163 (318)
T ss_dssp ECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTT-TEECCCCCGGGEEECTTSCEEECCCSSCEECSSCBCCC
T ss_pred EeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCChheEEEcCCCCEEEeecCcceecCCccccc
Confidence 99999999999998 56799999999999999999999999 9999999999999999999999999874
Q ss_pred --------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHH
Q 045127 383 --------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQA 448 (508)
Q Consensus 383 --------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 448 (508)
..++.++|||||||++|||++|+.||...... .... .+....+.... ...
T Consensus 164 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-----~~~~--------~i~~~~~~~p~---~~~ 227 (318)
T 1fot_A 164 CGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTM-----KTYE--------KILNAELRFPP---FFN 227 (318)
T ss_dssp CSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH-----HHHH--------HHHHCCCCCCT---TSC
T ss_pred cCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH-----HHHH--------HHHhCCCCCCC---CCC
Confidence 23567899999999999999999999743211 1111 11111111111 113
Q ss_pred HHHHHHHHhcCCCCCCCCC-----CHHHHHHH
Q 045127 449 EQGLGLGLMCTDQPTGKLP-----SLVQIYNM 475 (508)
Q Consensus 449 ~~l~~l~~~Cl~~dP~~RP-----s~~evl~~ 475 (508)
..+.+++.+|++.||++|| +++|+++.
T Consensus 228 ~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~h 259 (318)
T 1fot_A 228 EDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH 259 (318)
T ss_dssp HHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred HHHHHHHHHHhccCHHHcCCCcCCCHHHHhcC
Confidence 4567888999999999999 89999853
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-37 Score=315.85 Aligned_cols=224 Identities=15% Similarity=0.147 Sum_probs=182.0
Q ss_pred hcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCC--CHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEE
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDV--SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIV 313 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 313 (508)
.++|+..+.||+|+||.||+|... +++.||+|++.... .....+.+.+|+.+++.++||||+++++++.+....++|
T Consensus 14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv 93 (384)
T 4fr4_A 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMV 93 (384)
T ss_dssp GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 367899999999999999999974 58999999996432 112356788999999999999999999999999999999
Q ss_pred EeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC---------
Q 045127 314 TEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY--------- 383 (508)
Q Consensus 314 ~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~--------- 383 (508)
|||+++|+|.+++. ...+++..+..++.||+.||+|||++ ||+||||||+|||++.++.+||+|||++.
T Consensus 94 ~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~-givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~ 172 (384)
T 4fr4_A 94 VDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQ-RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQIT 172 (384)
T ss_dssp ECCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTCCBC
T ss_pred EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCcHHHeEECCCCCEEEeccceeeeccCCCcee
Confidence 99999999999998 55799999999999999999999999 99999999999999999999999998741
Q ss_pred --------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcc
Q 045127 384 --------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTEN 443 (508)
Q Consensus 384 --------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 443 (508)
.++.++|||||||++|||++|+.||....... ........ .........
T Consensus 173 ~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~--~~~~~~~~--------~~~~~~~p~- 241 (384)
T 4fr4_A 173 TMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTS--SKEIVHTF--------ETTVVTYPS- 241 (384)
T ss_dssp CCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSC--HHHHHHHH--------HHCCCCCCT-
T ss_pred ccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCcc--HHHHHHHH--------hhcccCCCC-
Confidence 25678999999999999999999997543221 11111110 001111111
Q ss_pred hHHHHHHHHHHHHhcCCCCCCCCCC-HHHHHH
Q 045127 444 MFDQAEQGLGLGLMCTDQPTGKLPS-LVQIYN 474 (508)
Q Consensus 444 ~~~~~~~l~~l~~~Cl~~dP~~RPs-~~evl~ 474 (508)
.....+.+++.+||+.||.+||+ ++++.+
T Consensus 242 --~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 242 --AWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp --TSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred --cCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 12356778999999999999998 777765
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-37 Score=315.60 Aligned_cols=226 Identities=10% Similarity=0.104 Sum_probs=182.8
Q ss_pred hhcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEE
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVT 314 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 314 (508)
..++|+..+.||+|+||.||+|... +|+.||+|++.... ......+.+|+.++++++||||+++++++.+....++||
T Consensus 49 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~ 127 (387)
T 1kob_A 49 VYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY-PLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLIL 127 (387)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-HHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEE
T ss_pred cccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccc-hhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEE
Confidence 3467999999999999999999974 68999999996543 335667899999999999999999999999999999999
Q ss_pred eecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecC--CCceEEeeccCCC-------
Q 045127 315 EWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTD--NLEPLISRFKIEY------- 383 (508)
Q Consensus 315 e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~--~~~~kl~Dfg~~~------- 383 (508)
||+++|+|.+++. ...+++.++..++.||+.||+|||++ ||+||||||+||+++. ++.+||+|||++.
T Consensus 128 E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~ 206 (387)
T 1kob_A 128 EFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEH-SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEI 206 (387)
T ss_dssp ECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSC
T ss_pred EcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC-CeeecccchHHeEEecCCCCceEEEecccceecCCCcc
Confidence 9999999999997 34689999999999999999999999 9999999999999974 5789999998752
Q ss_pred -------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcch
Q 045127 384 -------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENM 444 (508)
Q Consensus 384 -------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 444 (508)
.++.++|||||||++|||++|+.||...... .....+...... .++.. .
T Consensus 207 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~--~~~~~i~~~~~~-----~~~~~-----~ 274 (387)
T 1kob_A 207 VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDL--ETLQNVKRCDWE-----FDEDA-----F 274 (387)
T ss_dssp EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH--HHHHHHHHCCCC-----CCSST-----T
T ss_pred eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHH--HHHHHHHhCCCC-----CCccc-----c
Confidence 2456789999999999999999999753211 111111110000 00000 0
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 445 FDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 445 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
......+.+++.+||+.||++|||+.|+++.
T Consensus 275 ~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 275 SSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp TTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred ccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 1124467789999999999999999999874
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-37 Score=300.77 Aligned_cols=227 Identities=13% Similarity=0.146 Sum_probs=184.0
Q ss_pred hhcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCC-CHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEE
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDV-SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIV 313 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 313 (508)
..++|+..+.||+|+||.||+|... +++.||+|++.... .....+.+.+|+.++++++||||+++++++..+...++|
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v 83 (284)
T 3kk8_A 4 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 83 (284)
T ss_dssp TTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEE
Confidence 4578999999999999999999974 68999999996443 444567889999999999999999999999999999999
Q ss_pred EeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCc---eEEeeccCC-------
Q 045127 314 TEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLE---PLISRFKIE------- 382 (508)
Q Consensus 314 ~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~---~kl~Dfg~~------- 382 (508)
|||+++++|.+.+. ...+++..+..++.|++.||+|||++ ||+||||||+||+++.++. +||+|||.+
T Consensus 84 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~ 162 (284)
T 3kk8_A 84 FDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN-GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE 162 (284)
T ss_dssp ECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSC
T ss_pred EecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCc
Confidence 99999999988877 67799999999999999999999999 9999999999999986655 999999874
Q ss_pred -------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcc
Q 045127 383 -------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTEN 443 (508)
Q Consensus 383 -------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 443 (508)
..++.++||||||+++|+|++|+.||...... .....+...... ...+..
T Consensus 163 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~--~~~~~~~~~~~~----~~~~~~----- 231 (284)
T 3kk8_A 163 AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH--RLYAQIKAGAYD----YPSPEW----- 231 (284)
T ss_dssp BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHTCCC----CCTTTT-----
T ss_pred cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchh--HHHHHHHhcccc----CCchhh-----
Confidence 13467899999999999999999999753221 111111111000 000000
Q ss_pred hHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 444 MFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 444 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
......+.+++.+||+.||++|||+.|+++.
T Consensus 232 -~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 232 -DTVTPEAKSLIDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp -TTSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred -cccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 1123457789999999999999999999884
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-37 Score=302.64 Aligned_cols=228 Identities=22% Similarity=0.312 Sum_probs=184.6
Q ss_pred hhcCCCCCceeeecCCeEEEEEEECCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecC-CeeEEEE
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSR-RTRAIVT 314 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-~~~~lv~ 314 (508)
..++|+..+.||+|+||.||+|... |+.||+|+++... ..+.+.+|++++++++||||+++++++... +..++||
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~ 94 (278)
T 1byg_A 19 NMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA---TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 94 (278)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC-----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEE
T ss_pred ChhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh---HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEE
Confidence 3467899999999999999999885 8899999996543 356789999999999999999999987654 4789999
Q ss_pred eecCCCCHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC--------
Q 045127 315 EWTNGGNVELWLSE---SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY-------- 383 (508)
Q Consensus 315 e~~~~gsL~~~l~~---~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~-------- 383 (508)
||+++++|.+++.. ..+++..+..++.|++.||+|||++ |++||||||+||+++.++.+||+|||.+.
T Consensus 95 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~ 173 (278)
T 1byg_A 95 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN-NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDT 173 (278)
T ss_dssp CCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECTTSCEEECCCCC----------
T ss_pred ecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhC-CccccCCCcceEEEeCCCcEEEeeccccccccccccC
Confidence 99999999999973 2389999999999999999999999 99999999999999999999999998742
Q ss_pred ----------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHH
Q 045127 384 ----------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFD 446 (508)
Q Consensus 384 ----------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 446 (508)
.++.++||||||+++|||++ |+.||...... .....+.... .... . ..
T Consensus 174 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~--~~~~~~~~~~--------~~~~--~---~~ 238 (278)
T 1byg_A 174 GKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK--DVVPRVEKGY--------KMDA--P---DG 238 (278)
T ss_dssp --CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG--GHHHHHTTTC--------CCCC--C---TT
T ss_pred CCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHhcCC--------CCCC--c---cc
Confidence 34567999999999999998 99999754322 1111111110 0001 0 11
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhC
Q 045127 447 QAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSC 483 (508)
Q Consensus 447 ~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 483 (508)
....+.+++.+||+.||++|||+.|+++.|+++....
T Consensus 239 ~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~~ 275 (278)
T 1byg_A 239 CPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHE 275 (278)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhhh
Confidence 2456778999999999999999999999999997654
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-37 Score=303.53 Aligned_cols=225 Identities=16% Similarity=0.240 Sum_probs=187.5
Q ss_pred hhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEE
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVT 314 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 314 (508)
..+.|+..+.||+|+||.||+|.. .+++.||+|++.........+.+.+|+.++++++||||+++++++......++||
T Consensus 20 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 99 (303)
T 3a7i_A 20 PEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIM 99 (303)
T ss_dssp GGGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hHHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEE
Confidence 345688899999999999999997 4689999999976554445788999999999999999999999999999999999
Q ss_pred eecCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC------------
Q 045127 315 EWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE------------ 382 (508)
Q Consensus 315 e~~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~------------ 382 (508)
||+++++|.+++....+++..+..++.|++.||.|||+. |++||||||+||+++.++.+||+|||.+
T Consensus 100 e~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 178 (303)
T 3a7i_A 100 EYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSE-KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT 178 (303)
T ss_dssp ECCTTEEHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCCBCC
T ss_pred EeCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CCccCCCChheEEECCCCCEEEeecccceecCccccccCc
Confidence 999999999999988899999999999999999999999 9999999999999999999999999874
Q ss_pred ---------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHH
Q 045127 383 ---------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQ 447 (508)
Q Consensus 383 ---------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 447 (508)
..++.++||||||+++|||++|+.||....... ....+.... .+.+.. ..
T Consensus 179 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~~~--------~~~~~~-----~~ 243 (303)
T 3a7i_A 179 FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMK--VLFLIPKNN--------PPTLEG-----NY 243 (303)
T ss_dssp CCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH--HHHHHHHSC--------CCCCCS-----SC
T ss_pred cCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHH--HHHHhhcCC--------CCCCcc-----cc
Confidence 134578999999999999999999997532211 111111111 011111 11
Q ss_pred HHHHHHHHHhcCCCCCCCCCCHHHHHHHH
Q 045127 448 AEQGLGLGLMCTDQPTGKLPSLVQIYNMI 476 (508)
Q Consensus 448 ~~~l~~l~~~Cl~~dP~~RPs~~evl~~L 476 (508)
...+.+++.+||+.||++|||+.|+++..
T Consensus 244 ~~~l~~li~~~l~~dp~~Rps~~~ll~~~ 272 (303)
T 3a7i_A 244 SKPLKEFVEACLNKEPSFRPTAKELLKHK 272 (303)
T ss_dssp CHHHHHHHHHHCCSSGGGSCCHHHHTTCH
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHhhCh
Confidence 34577899999999999999999998753
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-37 Score=312.75 Aligned_cols=237 Identities=17% Similarity=0.211 Sum_probs=188.1
Q ss_pred hcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEe
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTE 315 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 315 (508)
.++|+..+.||+|+||.||+|... +++.||+|++.........+.+.+|+.++++++||||+++++++..++..++|||
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 111 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 111 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence 367899999999999999999984 6899999999876666677889999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC------------
Q 045127 316 WTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE------------ 382 (508)
Q Consensus 316 ~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~------------ 382 (508)
|+++++|.+++. ...+++..+..++.|++.||+|||+..||+||||||+||+++.++.+||+|||.+
T Consensus 112 ~~~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 191 (360)
T 3eqc_A 112 HMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV 191 (360)
T ss_dssp CCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC----C
T ss_pred CCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCCCEEEEECCCCcccccccccCCC
Confidence 999999999998 5679999999999999999999998328999999999999999999999999874
Q ss_pred -------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHH--------------------------
Q 045127 383 -------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIR-------------------------- 423 (508)
Q Consensus 383 -------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~-------------------------- 423 (508)
..++.++|||||||++|||++|+.||........ .....
T Consensus 192 gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (360)
T 3eqc_A 192 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEL--ELMFGCQVEGDAAETPPRPRTPGRPLNKFGM 269 (360)
T ss_dssp CCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHH--HHHHC--------------------------
T ss_pred CCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHhcccccccCCCCCCCcccCCCccccccc
Confidence 2356789999999999999999999975432111 00000
Q ss_pred Hh-ccchhhhhhhhcccC---CcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 424 MH-YPENLQLVVDERMML---TENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 424 ~~-~~~~~~~~~~~~l~~---~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
.. ......+..+..... ..........+.+++.+||+.||++|||++|+++.
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 325 (360)
T 3eqc_A 270 DSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 325 (360)
T ss_dssp ----CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred CCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 00 000011111111100 00001124467889999999999999999999874
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-37 Score=304.67 Aligned_cols=236 Identities=11% Similarity=0.100 Sum_probs=187.7
Q ss_pred HhhcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCC--CHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeE
Q 045127 235 AATNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDV--SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRA 311 (508)
Q Consensus 235 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 311 (508)
...++|+..+.||+|+||.||+|... +++.||+|++.... .....+.+.+|+.++++++||||+++++++..++..+
T Consensus 31 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~ 110 (309)
T 2h34_A 31 TQFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLY 110 (309)
T ss_dssp ---CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEE
T ss_pred cEeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEE
Confidence 34578999999999999999999974 68899999996543 2334678999999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-------
Q 045127 312 IVTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------- 383 (508)
Q Consensus 312 lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------- 383 (508)
+||||+++++|.+++. ...+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||.+.
T Consensus 111 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 189 (309)
T 2h34_A 111 VDMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAA-GATHRDVKPENILVSADDFAYLVDFGIASATTDEKL 189 (309)
T ss_dssp EEEECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTSCEEECSCCC---------
T ss_pred EEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-cCCcCCCChHHEEEcCCCCEEEecCccCcccccccc
Confidence 9999999999999998 56799999999999999999999999 99999999999999999999999998631
Q ss_pred ---------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCc
Q 045127 384 ---------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTE 442 (508)
Q Consensus 384 ---------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 442 (508)
.++.++||||||+++|||++|+.||...... .+........+. .....+
T Consensus 190 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~~~~~~~--~~~~~~------ 259 (309)
T 2h34_A 190 TQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS--VMGAHINQAIPR--PSTVRP------ 259 (309)
T ss_dssp -------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH--HHHHHHHSCCCC--GGGTST------
T ss_pred ccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH--HHHHHhccCCCC--ccccCC------
Confidence 2356899999999999999999999753221 111111111100 000001
Q ss_pred chHHHHHHHHHHHHhcCCCCCCCCC-CHHHHHHHHHHHHhhCC
Q 045127 443 NMFDQAEQGLGLGLMCTDQPTGKLP-SLVQIYNMITRAYKSCP 484 (508)
Q Consensus 443 ~~~~~~~~l~~l~~~Cl~~dP~~RP-s~~evl~~L~~i~~~~~ 484 (508)
.....+.+++.+||+.||++|| |++++++.|+.......
T Consensus 260 ---~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~~ 299 (309)
T 2h34_A 260 ---GIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATAD 299 (309)
T ss_dssp ---TCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC---
T ss_pred ---CCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhhc
Confidence 1134577889999999999999 99999999998765543
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-37 Score=311.92 Aligned_cols=238 Identities=12% Similarity=0.122 Sum_probs=180.4
Q ss_pred hcCCCCCceeeecCCeEEEEEEEC----CCCEEEEEEecCCCCHH----------HHHHHHHHHHHHhhcCCCCccceee
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGILR----DGTRVKIEIYKGDVSRE----------IRDEFVEECKLLVQFQHKNLIRVLG 302 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~----------~~~~~~~E~~~l~~l~h~niv~~~~ 302 (508)
.++|+..+.||+|+||.||+|... ++..||+|+........ ....+.+|+..++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 367899999999999999999985 57899999997554321 1234678889999999999999999
Q ss_pred EEec----CCeeEEEEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCC--ceE
Q 045127 303 WNNS----RRTRAIVTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNL--EPL 375 (508)
Q Consensus 303 ~~~~----~~~~~lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~--~~k 375 (508)
++.. ....++||||+ +++|.+++. ...+++.++..++.||+.||+|||++ ||+||||||+||+++.++ .+|
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~~~~~~k 193 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHEN-EYVHGDIKAANLLLGYKNPDQVY 193 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEESSSTTSEE
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCcCHHHEEEccCCCCcEE
Confidence 9887 67889999999 999999998 44799999999999999999999999 999999999999999877 999
Q ss_pred EeeccCCC----------------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHH
Q 045127 376 ISRFKIEY----------------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEY 421 (508)
Q Consensus 376 l~Dfg~~~----------------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~ 421 (508)
|+|||++. .++.++|||||||++|||++|+.||............
T Consensus 194 L~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~- 272 (345)
T 2v62_A 194 LADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQT- 272 (345)
T ss_dssp ECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHH-
T ss_pred EEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHHH-
Confidence 99999862 2456789999999999999999999754333222211
Q ss_pred HHHhccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHh
Q 045127 422 IRMHYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYK 481 (508)
Q Consensus 422 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~ 481 (508)
........+...+...... ......+.+++.+||+.||++|||+++|++.|+++..
T Consensus 273 ~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 328 (345)
T 2v62_A 273 AKTNLLDELPQSVLKWAPS----GSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI 328 (345)
T ss_dssp HHHHHHHTTTHHHHHHSCT----TSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred HHHhhcccccHHHHhhccc----cccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence 1111111111111111110 0124567889999999999999999999999988654
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-37 Score=298.56 Aligned_cols=230 Identities=13% Similarity=0.164 Sum_probs=185.6
Q ss_pred hhcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEE
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVT 314 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 314 (508)
..++|+..+.||+|+||.||+|... ++..||+|++...... ..+.+.+|++++++++||||+++++++.++...++||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (277)
T 3f3z_A 7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVE-DVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVM 85 (277)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCS-CHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccc-hHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEE
Confidence 4567899999999999999999974 5789999998654332 4678899999999999999999999999999999999
Q ss_pred eecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEe---cCCCceEEeeccCCC-------
Q 045127 315 EWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLL---TDNLEPLISRFKIEY------- 383 (508)
Q Consensus 315 e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll---~~~~~~kl~Dfg~~~------- 383 (508)
||+++++|.+++. ...+++..+..++.|++.||+|||++ ||+||||||+||++ +.++.+||+|||.+.
T Consensus 86 e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~ 164 (277)
T 3f3z_A 86 ELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKL-NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM 164 (277)
T ss_dssp ECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSC
T ss_pred eccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC-CccCCCCCHHHEEEecCCCCCcEEEEecccceeccCccc
Confidence 9999999999887 67789999999999999999999999 99999999999999 788999999998742
Q ss_pred ------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcc-h
Q 045127 384 ------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTEN-M 444 (508)
Q Consensus 384 ------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~ 444 (508)
.++.++||||||+++|||++|+.||....... ....+... ....... .
T Consensus 165 ~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--~~~~~~~~-----------~~~~~~~~~ 231 (277)
T 3f3z_A 165 MRTKVGTPYYVSPQVLEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDSE--VMLKIREG-----------TFTFPEKDW 231 (277)
T ss_dssp BCCCCSCTTTCCHHHHTTCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHHC-----------CCCCCHHHH
T ss_pred hhccCCCCCccChHHhcccCCchhhehhHHHHHHHHHHCCCCCCCCCHHH--HHHHHHhC-----------CCCCCchhh
Confidence 24678999999999999999999997533211 11111111 0000000 0
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH--HHHHH
Q 045127 445 FDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM--ITRAY 480 (508)
Q Consensus 445 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~--L~~i~ 480 (508)
......+.+++.+|++.||++|||+.|+++. +++..
T Consensus 232 ~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~ 269 (277)
T 3f3z_A 232 LNVSPQAESLIRRLLTKSPKQRITSLQALEHEWFEKQL 269 (277)
T ss_dssp TTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHHHH
T ss_pred hcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhccc
Confidence 0124567789999999999999999999863 44443
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-37 Score=308.01 Aligned_cols=232 Identities=18% Similarity=0.252 Sum_probs=186.9
Q ss_pred hhcCCCCCceeeecCCeEEEEEEE------CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCe
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGIL------RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRT 309 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 309 (508)
..++|+..+.||+|+||.||+|.+ .+++.||||.+..........++.+|+.++++++||||+++++++.....
T Consensus 28 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 107 (327)
T 2yfx_A 28 PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP 107 (327)
T ss_dssp CGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred ChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCC
Confidence 346899999999999999999984 34678999999766666677889999999999999999999999999999
Q ss_pred eEEEEeecCCCCHHHHhcc--------CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecC---CCceEEee
Q 045127 310 RAIVTEWTNGGNVELWLSE--------SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTD---NLEPLISR 378 (508)
Q Consensus 310 ~~lv~e~~~~gsL~~~l~~--------~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~---~~~~kl~D 378 (508)
.++||||+++|+|.+++.. ..+++..+..++.|++.||.|||++ ||+||||||+||+++. +..+||+|
T Consensus 108 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~-~i~H~dlkp~NIli~~~~~~~~~kl~D 186 (327)
T 2yfx_A 108 RFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN-HFIHRDIAARNCLLTCPGPGRVAKIGD 186 (327)
T ss_dssp CEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEESCSSTTCCEEECC
T ss_pred cEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC-CeecCcCCHhHEEEecCCCcceEEECc
Confidence 9999999999999999982 3489999999999999999999999 9999999999999994 45699999
Q ss_pred ccCC-----------------------------CCCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccc
Q 045127 379 FKIE-----------------------------YQHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPE 428 (508)
Q Consensus 379 fg~~-----------------------------~~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~ 428 (508)
||.+ ..++.++||||||+++|||+| |+.||...... .+...+......
T Consensus 187 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~~~~~~~~~~ 264 (327)
T 2yfx_A 187 FGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ--EVLEFVTSGGRM 264 (327)
T ss_dssp CHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--HHHHHHHTTCCC
T ss_pred cccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHH--HHHHHHhcCCCC
Confidence 9753 234678999999999999998 99999743211 111111111100
Q ss_pred hhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhC
Q 045127 429 NLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSC 483 (508)
Q Consensus 429 ~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 483 (508)
.. . ......+.+++.+||+.||.+|||+.|+++.|+.+....
T Consensus 265 --------~~--~---~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~ 306 (327)
T 2yfx_A 265 --------DP--P---KNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 306 (327)
T ss_dssp --------CC--C---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred --------CC--C---CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCH
Confidence 00 0 112346778999999999999999999999999886643
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-37 Score=315.77 Aligned_cols=222 Identities=14% Similarity=0.188 Sum_probs=179.8
Q ss_pred cCCCCCceeeecCCeEEEEEEECCCCEEEEEEecCCC-CHHHHHHHHHHHHHHhhcC--CCCccceeeEEecCCeeEEEE
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDV-SREIRDEFVEECKLLVQFQ--HKNLIRVLGWNNSRRTRAIVT 314 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~~~lv~ 314 (508)
..|+..+.||+|+||.||+|...+++.||||++.... .....+.+.+|+.++++++ ||||+++++++..++..++||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 4599999999999999999998789999999996443 3456788999999999996 599999999999999999999
Q ss_pred eecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC----------
Q 045127 315 EWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY---------- 383 (508)
Q Consensus 315 e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~---------- 383 (508)
| +.+++|.+++. ...+++.++..++.||+.||+|||++ ||+||||||+|||++ ++.+||+|||++.
T Consensus 136 E-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~-~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~~~ 212 (390)
T 2zmd_A 136 E-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH-GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVV 212 (390)
T ss_dssp E-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTT-TCCCCCCCGGGEEES-SSCEEECCCSSSCCC--------
T ss_pred e-cCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCCHHHEEEE-CCeEEEEecCccccccCCCcccc
Confidence 9 56889999998 56789999999999999999999999 999999999999996 6899999998753
Q ss_pred ------------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhh
Q 045127 384 ------------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLV 433 (508)
Q Consensus 384 ------------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (508)
.++.++|||||||++|||++|+.||......... +..+
T Consensus 213 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~------------~~~~ 280 (390)
T 2zmd_A 213 KDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK------------LHAI 280 (390)
T ss_dssp -CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHH------------HHHH
T ss_pred CCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHH------------HHHH
Confidence 2455789999999999999999999753221111 1112
Q ss_pred hhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 434 VDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 434 ~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
+++....... ......+.+++.+||+.||++|||+.|+++.
T Consensus 281 ~~~~~~~~~~-~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 281 IDPNHEIEFP-DIPEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp HCTTSCCCCC-CCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hCccccCCCC-ccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 2221100000 0113457789999999999999999999864
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-37 Score=300.74 Aligned_cols=223 Identities=19% Similarity=0.239 Sum_probs=179.5
Q ss_pred CCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCC-CHHHHHHHHHHHHHHhhcCCCCccceeeEEec----CCeeEE
Q 045127 239 GFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDV-SREIRDEFVEECKLLVQFQHKNLIRVLGWNNS----RRTRAI 312 (508)
Q Consensus 239 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~----~~~~~l 312 (508)
.|+..+.||+|+||.||+|.. .++..||+|.+.... .....+.+.+|+.++++++||||+++++++.. ....++
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 106 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence 366778899999999999997 468899999986433 44567789999999999999999999998864 356799
Q ss_pred EEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCC--ccccCCCCCCEEec-CCCceEEeeccCC------
Q 045127 313 VTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWP--EVDYDLRTGSVLLT-DNLEPLISRFKIE------ 382 (508)
Q Consensus 313 v~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~--iiH~Dlkp~NIll~-~~~~~kl~Dfg~~------ 382 (508)
||||+++|+|.+++. ...+++..+..++.|++.||+|||+. + |+||||||+||+++ .++.+||+|||.+
T Consensus 107 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~~ 185 (290)
T 1t4h_A 107 VTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS 185 (290)
T ss_dssp EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTT
T ss_pred EEEecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcC-CCCEEECCCCHHHEEEECCCCCEEEeeCCCccccccc
Confidence 999999999999998 47899999999999999999999999 8 99999999999998 7899999999864
Q ss_pred ------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcch
Q 045127 383 ------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENM 444 (508)
Q Consensus 383 ------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 444 (508)
..++.++||||||+++|+|++|+.||....... ...............+.
T Consensus 186 ~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~----~~~~~~~~~~~~~~~~~-------- 253 (290)
T 1t4h_A 186 FAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAA----QIYRRVTSGVKPASFDK-------- 253 (290)
T ss_dssp SBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHH----HHHHHHTTTCCCGGGGG--------
T ss_pred ccccccCCcCcCCHHHHhccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHH----HHHHHHhccCCccccCC--------
Confidence 235678999999999999999999997533221 11111111000000111
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 445 FDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 445 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
.....+.+++.+||+.||++|||+.|+++.
T Consensus 254 -~~~~~l~~li~~~l~~dp~~Rps~~ell~h 283 (290)
T 1t4h_A 254 -VAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp -CCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred -CCCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 112457889999999999999999999863
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-37 Score=311.45 Aligned_cols=222 Identities=14% Similarity=0.102 Sum_probs=183.1
Q ss_pred hcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCC--HHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEE
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVS--REIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIV 313 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 313 (508)
.++|+..+.||+|+||.||+|+.. +|+.||+|++..... ....+.+.+|+.+++.++||||+++++++.+....++|
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 119 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence 467899999999999999999984 689999999964321 12356788999999999999999999999999999999
Q ss_pred EeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC---------
Q 045127 314 TEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY--------- 383 (508)
Q Consensus 314 ~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~--------- 383 (508)
|||+++|+|.+++. ...+++..+..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||++.
T Consensus 120 ~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~~~~ 198 (350)
T 1rdq_E 120 MEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTL 198 (350)
T ss_dssp EECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTSCEEECCCTTCEECSSCBCCC
T ss_pred EcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC-CcccccCccceEEECCCCCEEEcccccceeccCCcccc
Confidence 99999999999998 57799999999999999999999999 99999999999999999999999998752
Q ss_pred ---------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHH
Q 045127 384 ---------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQA 448 (508)
Q Consensus 384 ---------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 448 (508)
.++.++|||||||++|||++|+.||...... ..... +....+.... ...
T Consensus 199 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~-----~~~~~--------i~~~~~~~p~---~~~ 262 (350)
T 1rdq_E 199 CGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-----QIYEK--------IVSGKVRFPS---HFS 262 (350)
T ss_dssp EECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHHHH--------HHHCCCCCCT---TCC
T ss_pred cCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHH-----HHHHH--------HHcCCCCCCC---CCC
Confidence 3567899999999999999999999743211 11111 1111111111 123
Q ss_pred HHHHHHHHhcCCCCCCCCCC-----HHHHHHH
Q 045127 449 EQGLGLGLMCTDQPTGKLPS-----LVQIYNM 475 (508)
Q Consensus 449 ~~l~~l~~~Cl~~dP~~RPs-----~~evl~~ 475 (508)
..+.+++.+||+.||.+||+ ++||++.
T Consensus 263 ~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h 294 (350)
T 1rdq_E 263 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294 (350)
T ss_dssp HHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred HHHHHHHHHHhhcCHHhccCCccCCHHHHHhC
Confidence 45778999999999999998 8888763
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-38 Score=323.02 Aligned_cols=233 Identities=12% Similarity=0.057 Sum_probs=187.1
Q ss_pred HHHHHHhhcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCH--HHHHHHHHHHHHHhhcCCCCccceeeEEec
Q 045127 230 TWMLKAATNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSR--EIRDEFVEECKLLVQFQHKNLIRVLGWNNS 306 (508)
Q Consensus 230 ~~~l~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 306 (508)
+.++....++|+..+.||+|+||.||+|+.. +++.||+|+++..... ...+.+.+|..+++.++||||+++++++.+
T Consensus 61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~ 140 (410)
T 3v8s_A 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 140 (410)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence 4456667889999999999999999999985 5899999999532111 112347899999999999999999999999
Q ss_pred CCeeEEEEeecCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCCC--
Q 045127 307 RRTRAIVTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEYQ-- 384 (508)
Q Consensus 307 ~~~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~-- 384 (508)
+...|+||||+++|+|.+++....+++..+..++.||+.||+|||++ ||+||||||+|||++.++.+||+|||++..
T Consensus 141 ~~~~~lV~E~~~gg~L~~~l~~~~~~e~~~~~~~~qi~~aL~~LH~~-givHrDLKp~NILl~~~g~ikL~DFG~a~~~~ 219 (410)
T 3v8s_A 141 DRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSM-GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMN 219 (410)
T ss_dssp SSEEEEEECCCTTEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred CCEEEEEEeCCCCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEeccCCHHHeeECCCCCEEEeccceeEeec
Confidence 99999999999999999999988899999999999999999999999 999999999999999999999999997521
Q ss_pred ------------------------------CCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhh
Q 045127 385 ------------------------------HRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVV 434 (508)
Q Consensus 385 ------------------------------~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (508)
++.++|||||||++|||++|+.||...... .......... .
T Consensus 220 ~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~-----~~~~~i~~~~----~ 290 (410)
T 3v8s_A 220 KEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV-----GTYSKIMNHK----N 290 (410)
T ss_dssp TTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHH-----HHHHHHHTHH----H
T ss_pred cCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChh-----hHHHHHHhcc----c
Confidence 456899999999999999999999743211 1111111000 0
Q ss_pred hhcccCCcchHHHHHHHHHHHHhcCCCCCCC--CCCHHHHHHH
Q 045127 435 DERMMLTENMFDQAEQGLGLGLMCTDQPTGK--LPSLVQIYNM 475 (508)
Q Consensus 435 ~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~--RPs~~evl~~ 475 (508)
...+.... .....+.+++.+|+..+|.+ ||+++||++.
T Consensus 291 ~~~~p~~~---~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 291 SLTFPDDN---DISKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp HCCCCTTC---CCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred cccCCCcc---cccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 00111100 11345678889999999998 9999999975
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-37 Score=313.48 Aligned_cols=244 Identities=13% Similarity=0.098 Sum_probs=188.7
Q ss_pred CCCCCHHHHHHhhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcC-----CCCcc
Q 045127 225 NHKFTTWMLKAATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQ-----HKNLI 298 (508)
Q Consensus 225 ~~~~~~~~l~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-----h~niv 298 (508)
...+++.+.....++|+..+.||+|+||.||+|.. .+++.||||+++. .......+..|+.+++.++ ||||+
T Consensus 22 ~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~--~~~~~~~~~~e~~~l~~l~~~~~~h~~iv 99 (360)
T 3llt_A 22 IVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRN--IKKYTRSAKIEADILKKIQNDDINNNNIV 99 (360)
T ss_dssp GGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS--CHHHHHHHHHHHHHHHHTCCCSTTGGGBC
T ss_pred ceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEecc--chhhhhhhHHHHHHHHHhcccCCCCCCee
Confidence 34455556666778999999999999999999998 5689999999963 2335667888999999986 99999
Q ss_pred ceeeEEecCCeeEEEEeecCCCCHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecC-----
Q 045127 299 RVLGWNNSRRTRAIVTEWTNGGNVELWLSE---SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTD----- 370 (508)
Q Consensus 299 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~---~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~----- 370 (508)
++++++...+..++||||+ +++|.+++.. ..+++..+..++.||+.||+|||++ ||+||||||+|||++.
T Consensus 100 ~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~~~~~ 177 (360)
T 3llt_A 100 KYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKM-SLTHTDLKPENILLDDPYFEK 177 (360)
T ss_dssp CEEEEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEESCTTCCE
T ss_pred cccceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeCCCCcccEEEccccccc
Confidence 9999999999999999999 8999999983 3589999999999999999999999 9999999999999975
Q ss_pred --------------------CCceEEeeccCC------------------------CCCCCcchhhHHHHHHHHHHhCCC
Q 045127 371 --------------------NLEPLISRFKIE------------------------YQHRSTKYVYKFGLFLLEMITNRR 406 (508)
Q Consensus 371 --------------------~~~~kl~Dfg~~------------------------~~~~~~~Dv~SlGvil~elltg~~ 406 (508)
++.+||+|||.+ ..++.++|||||||++|||++|+.
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~ 257 (360)
T 3llt_A 178 SLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSL 257 (360)
T ss_dssp EEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSC
T ss_pred cccchhcccccccccccccCCCCEEEEeccCceecCCCCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCC
Confidence 789999999874 245788999999999999999999
Q ss_pred CCcccccCcccHHHHHHHhccc---h-hhhhh--------hhc-----ccCCcch---------------HHHHHHHHHH
Q 045127 407 PLEEFERGEAGFIEYIRMHYPE---N-LQLVV--------DER-----MMLTENM---------------FDQAEQGLGL 454 (508)
Q Consensus 407 P~~~~~~~~~~~~~~~~~~~~~---~-~~~~~--------~~~-----l~~~~~~---------------~~~~~~l~~l 454 (508)
||...... .....+...... . ..... +.. ....... ......+.++
T Consensus 258 pf~~~~~~--~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 335 (360)
T 3llt_A 258 LFRTHEHM--EHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDF 335 (360)
T ss_dssp SCCCSSHH--HHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHH
T ss_pred CCCCCcHH--HHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHH
Confidence 99753321 111111111111 0 00000 000 0000000 0012567799
Q ss_pred HHhcCCCCCCCCCCHHHHHH
Q 045127 455 GLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 455 ~~~Cl~~dP~~RPs~~evl~ 474 (508)
+.+||+.||++|||++|+++
T Consensus 336 i~~~L~~dP~~Rpta~elL~ 355 (360)
T 3llt_A 336 LYSILQIDPTLRPSPAELLK 355 (360)
T ss_dssp HHHHCCSSGGGSCCHHHHTT
T ss_pred HHHHhcCChhhCCCHHHHhc
Confidence 99999999999999999975
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-37 Score=307.74 Aligned_cols=228 Identities=15% Similarity=0.220 Sum_probs=182.3
Q ss_pred hcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCC--CHHHHHHHHHHHHHHhhc-CCCCccceeeEEecCCeeEE
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDV--SREIRDEFVEECKLLVQF-QHKNLIRVLGWNNSRRTRAI 312 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~l 312 (508)
.++|+..+.||+|+||.||+|+.. +++.||+|+++... .....+.+.+|..+++++ +||||+++++++.+....++
T Consensus 8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 87 (345)
T 3a8x_A 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 87 (345)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEE
Confidence 467889999999999999999984 68999999997442 334567788999999988 89999999999999999999
Q ss_pred EEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC--------
Q 045127 313 VTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY-------- 383 (508)
Q Consensus 313 v~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~-------- 383 (508)
||||+++|+|.+++. ...+++..+..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||++.
T Consensus 88 v~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~~~ 166 (345)
T 3a8x_A 88 VIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER-GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT 166 (345)
T ss_dssp EECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTTCC
T ss_pred EEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC-CceecCCCHHHEEECCCCCEEEEeccccccccCCCCc
Confidence 999999999999987 56899999999999999999999999 99999999999999999999999998753
Q ss_pred -------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcc---cHHHHHHHhccchhhhhhhhcccCC
Q 045127 384 -------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEA---GFIEYIRMHYPENLQLVVDERMMLT 441 (508)
Q Consensus 384 -------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~ 441 (508)
.++.++|||||||++|||++|+.||........ ...... ...+........
T Consensus 167 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~-------~~~i~~~~~~~p 239 (345)
T 3a8x_A 167 TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYL-------FQVILEKQIRIP 239 (345)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHH-------HHHHHHCCCCCC
T ss_pred ccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHH-------HHHHHcCCCCCC
Confidence 345689999999999999999999975321110 000001 011111111111
Q ss_pred cchHHHHHHHHHHHHhcCCCCCCCCCCH------HHHHHH
Q 045127 442 ENMFDQAEQGLGLGLMCTDQPTGKLPSL------VQIYNM 475 (508)
Q Consensus 442 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~------~evl~~ 475 (508)
. .....+.+++.+||+.||.+||++ .|+++.
T Consensus 240 ~---~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~h 276 (345)
T 3a8x_A 240 R---SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 276 (345)
T ss_dssp T---TSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTS
T ss_pred C---CCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcC
Confidence 1 123457788999999999999995 677653
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-37 Score=313.84 Aligned_cols=237 Identities=10% Similarity=0.134 Sum_probs=186.0
Q ss_pred hcCCCCCceeeecCCeEEEEEEEC---------CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccc--------
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGILR---------DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIR-------- 299 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~~---------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~-------- 299 (508)
.++|+..+.||+|+||.||+|... +++.||+|++... +.+.+|++++++++||||++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~------~~~~~E~~~l~~l~h~niv~~~~~~~~~ 114 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD------GRLFNEQNFFQRAAKPLQVNKWKKLYST 114 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT------STHHHHHHHHHHHCCHHHHHHHHHHTTC
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc------chHHHHHHHHHHhcccchhhhhhhhccC
Confidence 368999999999999999999975 3789999999643 35789999999999999887
Q ss_pred -------eeeEEec-CCeeEEEEeecCCCCHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEe
Q 045127 300 -------VLGWNNS-RRTRAIVTEWTNGGNVELWLSE---SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLL 368 (508)
Q Consensus 300 -------~~~~~~~-~~~~~lv~e~~~~gsL~~~l~~---~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll 368 (508)
+++++.. +...++||||+ +++|.+++.. ..+++.++..++.||+.||+|||++ ||+||||||+||++
T Consensus 115 ~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-~ivH~Dikp~NIl~ 192 (352)
T 2jii_A 115 PLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHEN-EYVHGNVTAENIFV 192 (352)
T ss_dssp TTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT-TCBCSCCCGGGEEE
T ss_pred CccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhC-CccCCCCCHHHEEE
Confidence 6677765 67889999999 9999999983 6799999999999999999999999 99999999999999
Q ss_pred cCCC--ceEEeeccCCC----------------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccc
Q 045127 369 TDNL--EPLISRFKIEY----------------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFE 412 (508)
Q Consensus 369 ~~~~--~~kl~Dfg~~~----------------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~ 412 (508)
+.++ .+||+|||++. .++.++|||||||++|||++|+.||....
T Consensus 193 ~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 272 (352)
T 2jii_A 193 DPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCL 272 (352)
T ss_dssp ETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGT
T ss_pred cCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCC
Confidence 9998 99999998762 23457899999999999999999998654
Q ss_pred cCcccHHHHHHHhccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhCCCC
Q 045127 413 RGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSCPIL 486 (508)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~ 486 (508)
.....+....... ........+..... ......+.+++.+||+.||++|||++++++.|+++.+.....
T Consensus 273 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~----~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~~ 341 (352)
T 2jii_A 273 PNTEDIMKQKQKF-VDKPGPFVGPCGHW----IRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLRVS 341 (352)
T ss_dssp TCHHHHHHHHHHH-HHSCCCEECTTSCE----ECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCC
T ss_pred cCHHHHHHHHHhc-cCChhhhhhhcccc----CCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcCCC
Confidence 3322222221111 01011111110000 011356788999999999999999999999999998876543
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-37 Score=297.09 Aligned_cols=233 Identities=14% Similarity=0.202 Sum_probs=187.3
Q ss_pred cCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCH-----HHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeE
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSR-----EIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRA 311 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 311 (508)
++|+..+.||+|+||.||+|... +++.||+|+++..... ...+.+.+|+.++++++||||+++++++..+...+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 56888999999999999999985 6899999998644321 13678999999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCC----ceEEeeccCC----
Q 045127 312 IVTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNL----EPLISRFKIE---- 382 (508)
Q Consensus 312 lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~----~~kl~Dfg~~---- 382 (508)
+||||+++++|.+++. ...+++..+..++.|++.||+|||++ |++||||||+||+++.++ .+||+|||.+
T Consensus 85 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~ 163 (283)
T 3bhy_A 85 LILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSK-RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIE 163 (283)
T ss_dssp EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC
T ss_pred EEEeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC-CccCCCCChHHEEEecCCCCCCceEEEecccceecc
Confidence 9999999999999997 56799999999999999999999999 999999999999999877 8999999874
Q ss_pred ----------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccC
Q 045127 383 ----------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMML 440 (508)
Q Consensus 383 ----------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 440 (508)
..++.++||||||+++|+|++|+.||....... ....+..... ... ...
T Consensus 164 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~~~~-~~~----~~~-- 234 (283)
T 3bhy_A 164 AGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQE--TLTNISAVNY-DFD----EEY-- 234 (283)
T ss_dssp --------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH--HHHHHHTTCC-CCC----HHH--
T ss_pred CCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHH--HHHHhHhccc-CCc----chh--
Confidence 234568999999999999999999997532111 1111110000 000 000
Q ss_pred CcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH--HHHHHHhhC
Q 045127 441 TENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYN--MITRAYKSC 483 (508)
Q Consensus 441 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~--~L~~i~~~~ 483 (508)
.......+.+++.+||+.||++|||+.|+++ .++.+....
T Consensus 235 ---~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~~~ 276 (283)
T 3bhy_A 235 ---FSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRRRN 276 (283)
T ss_dssp ---HTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHHHCC
T ss_pred ---cccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHHHHh
Confidence 0011345778999999999999999999998 466665544
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-37 Score=304.24 Aligned_cols=227 Identities=16% Similarity=0.209 Sum_probs=183.4
Q ss_pred hhcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCH-----HHHHHHHHHHHHHhhcCCCCccceeeEEecCCe
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSR-----EIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRT 309 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 309 (508)
..++|+..+.||+|+||.||+|... +|+.||+|++...... ...+.+.+|+.++++++||||+++++++.+...
T Consensus 10 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 89 (321)
T 2a2a_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTD 89 (321)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred hhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCE
Confidence 3467899999999999999999974 6899999999654322 135779999999999999999999999999999
Q ss_pred eEEEEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCC----ceEEeeccCC--
Q 045127 310 RAIVTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNL----EPLISRFKIE-- 382 (508)
Q Consensus 310 ~~lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~----~~kl~Dfg~~-- 382 (508)
.++||||+++++|.+++. ...+++..+..++.|++.||+|||++ ||+||||||+||+++.++ .+||+|||.+
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~-~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~ 168 (321)
T 2a2a_A 90 VVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK-KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE 168 (321)
T ss_dssp EEEEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEESCTTSSSCCEEECCCTTCEE
T ss_pred EEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCChHHEEEecCCCCcCCEEEccCcccee
Confidence 999999999999999997 56789999999999999999999999 999999999999999887 7999999874
Q ss_pred ------------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcc
Q 045127 383 ------------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERM 438 (508)
Q Consensus 383 ------------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 438 (508)
..++.++||||||+++|||++|+.||....... ....+..... .. ++..
T Consensus 169 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~i~~~~~-~~----~~~~ 241 (321)
T 2a2a_A 169 IEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE--TLANITSVSY-DF----DEEF 241 (321)
T ss_dssp CCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH--HHHHHHTTCC-CC----CHHH
T ss_pred cCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHH--HHHHHHhccc-cc----Chhh
Confidence 234668999999999999999999997532111 1111111000 00 0000
Q ss_pred cCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 439 MLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 439 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
. ......+.+++.+||+.||++|||+.|+++.
T Consensus 242 ~-----~~~~~~~~~li~~~l~~dp~~Rps~~e~l~h 273 (321)
T 2a2a_A 242 F-----SHTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (321)
T ss_dssp H-----TTCCHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred h-----cccCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0 0113457789999999999999999999863
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-37 Score=299.15 Aligned_cols=222 Identities=18% Similarity=0.229 Sum_probs=177.2
Q ss_pred cCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEee
Q 045127 238 NGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEW 316 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 316 (508)
++|.....||+|+||.||+|.. .+++.||+|.+..... ...+.+.+|+.+++.++||||+++++++...+..++||||
T Consensus 22 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 100 (295)
T 2clq_A 22 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDS-RYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQ 100 (295)
T ss_dssp CTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC----HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCch-HHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEe
Confidence 3455667999999999999997 5688999999975433 3567899999999999999999999999999999999999
Q ss_pred cCCCCHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecC-CCceEEeeccCCC--------
Q 045127 317 TNGGNVELWLSE----SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTD-NLEPLISRFKIEY-------- 383 (508)
Q Consensus 317 ~~~gsL~~~l~~----~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~-~~~~kl~Dfg~~~-------- 383 (508)
+++++|.+++.. ..+++..+..++.|++.||+|||++ |++||||||+||+++. ++.+||+|||.+.
T Consensus 101 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~ 179 (295)
T 2clq_A 101 VPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN-QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPC 179 (295)
T ss_dssp CSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC----
T ss_pred CCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC-CEEccCCChhhEEEECCCCCEEEeecccccccCCCCCc
Confidence 999999999973 2567889999999999999999999 9999999999999997 8999999998742
Q ss_pred ---------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCc
Q 045127 384 ---------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTE 442 (508)
Q Consensus 384 ---------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 442 (508)
.++.++||||||+++|||++|+.||................. ..+.+.
T Consensus 180 ~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~--------~~~~~~--- 248 (295)
T 2clq_A 180 TETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFK--------VHPEIP--- 248 (295)
T ss_dssp -CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHC--------CCCCCC---
T ss_pred ccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhcccc--------cccccc---
Confidence 145678999999999999999999975432211111100000 011111
Q ss_pred chHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 443 NMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 443 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
......+.+++.+||+.||++|||+.|+++
T Consensus 249 --~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 249 --ESMSAEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp --TTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred --ccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 112345778899999999999999999986
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-37 Score=307.63 Aligned_cols=240 Identities=16% Similarity=0.185 Sum_probs=186.8
Q ss_pred hcCCCCCceeeecCCeEEEEEEE-----CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCC--e
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGIL-----RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRR--T 309 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~ 309 (508)
.++|+..+.||+|+||.||+|.+ .+++.||+|++.... ....+.+.+|++++++++||||+++++++...+ .
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 118 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST-EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 118 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCC-SHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----C
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCC-HHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCc
Confidence 35688899999999999999984 358899999997543 345678999999999999999999999987643 6
Q ss_pred eEEEEeecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCCC---
Q 045127 310 RAIVTEWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEYQ--- 384 (508)
Q Consensus 310 ~~lv~e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~--- 384 (508)
.++||||+++++|.+++. ...+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||.+..
T Consensus 119 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~ 197 (326)
T 2w1i_A 119 LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 197 (326)
T ss_dssp CEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEEEETTEEEECCCTTCEECCS
T ss_pred eEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC-CEeccCCCcceEEEcCCCcEEEecCcchhhccc
Confidence 799999999999999998 35689999999999999999999999 999999999999999999999999987521
Q ss_pred ---------------------------CCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhcc-----chhhh
Q 045127 385 ---------------------------HRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYP-----ENLQL 432 (508)
Q Consensus 385 ---------------------------~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~-----~~~~~ 432 (508)
++.++||||||+++|||+||..|+...... +......... ..+.+
T Consensus 198 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 274 (326)
T 2w1i_A 198 DKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE---FMRMIGNDKQGQMIVFHLIE 274 (326)
T ss_dssp SCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHH---HHHHHCTTCCTHHHHHHHHH
T ss_pred cccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHH---HHHhhccccchhhhHHHHHH
Confidence 234689999999999999999998632110 0000000000 00111
Q ss_pred hhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhh
Q 045127 433 VVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKS 482 (508)
Q Consensus 433 ~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 482 (508)
.+..... ..........+.+++.+||+.||++|||+.|+++.|+++.+.
T Consensus 275 ~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~ 323 (326)
T 2w1i_A 275 LLKNNGR-LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ 323 (326)
T ss_dssp HHHTTCC-CCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HhhcCCC-CCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 1111110 000112245688899999999999999999999999999765
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-37 Score=315.43 Aligned_cols=238 Identities=14% Similarity=0.167 Sum_probs=176.2
Q ss_pred HhhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCC-CHHHHHHHHHHHHHHhhcC-CCCccceeeEEecCC--e
Q 045127 235 AATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDV-SREIRDEFVEECKLLVQFQ-HKNLIRVLGWNNSRR--T 309 (508)
Q Consensus 235 ~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~--~ 309 (508)
...++|+..+.||+|+||.||+|.. .+|+.||||++.... .......+.+|+.+++++. ||||+++++++...+ .
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~ 85 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRD 85 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSC
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCE
Confidence 4567899999999999999999997 568999999986432 3445677889999999997 999999999997543 6
Q ss_pred eEEEEeecCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC------
Q 045127 310 RAIVTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------ 383 (508)
Q Consensus 310 ~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------ 383 (508)
.|+||||++ |+|.+++....+++..+..++.|++.||+|||+. ||+||||||+|||++.++.+||+|||++.
T Consensus 86 ~~lv~e~~~-~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~-~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 163 (388)
T 3oz6_A 86 VYLVFDYME-TDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSG-GLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIR 163 (388)
T ss_dssp EEEEEECCS-EEHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTCCEEECCCTTCEESSSCC
T ss_pred EEEEecccC-cCHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC-CEEeCCCCHHHeEEcCCCCEEecCCcccccccccc
Confidence 899999997 5999999888899999999999999999999999 99999999999999999999999999752
Q ss_pred -------------------------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHH
Q 045127 384 -------------------------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIE 420 (508)
Q Consensus 384 -------------------------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~ 420 (508)
.++.++|||||||++|||++|+.||....... .+..
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~-~~~~ 242 (388)
T 3oz6_A 164 RVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMN-QLER 242 (388)
T ss_dssp CCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHH
T ss_pred cccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHH
Confidence 34667899999999999999999997543211 1111
Q ss_pred HHHHhc-cch--h--------hhhhhh----------cccCCcc-----------hHHHHHHHHHHHHhcCCCCCCCCCC
Q 045127 421 YIRMHY-PEN--L--------QLVVDE----------RMMLTEN-----------MFDQAEQGLGLGLMCTDQPTGKLPS 468 (508)
Q Consensus 421 ~~~~~~-~~~--~--------~~~~~~----------~l~~~~~-----------~~~~~~~l~~l~~~Cl~~dP~~RPs 468 (508)
.....- +.. + ...+.. ....... .......+.+++.+||+.||++|||
T Consensus 243 i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t 322 (388)
T 3oz6_A 243 IIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRIS 322 (388)
T ss_dssp HHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCC
T ss_pred HHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCCC
Confidence 111100 000 0 000000 0000000 0011346788999999999999999
Q ss_pred HHHHHHH
Q 045127 469 LVQIYNM 475 (508)
Q Consensus 469 ~~evl~~ 475 (508)
++|+++.
T Consensus 323 ~~e~l~H 329 (388)
T 3oz6_A 323 ANDALKH 329 (388)
T ss_dssp HHHHTTS
T ss_pred HHHHhCC
Confidence 9999875
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-37 Score=314.15 Aligned_cols=229 Identities=15% Similarity=0.217 Sum_probs=180.8
Q ss_pred hhcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCC--HHHHHHHHHHHHHHhhc-CCCCccceeeEEecCCeeE
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVS--REIRDEFVEECKLLVQF-QHKNLIRVLGWNNSRRTRA 311 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 311 (508)
..++|+..+.||+|+||.||+|+.. +++.||+|+++.... ....+.+.+|..++.++ +||||+++++++.+++..+
T Consensus 50 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 129 (396)
T 4dc2_A 50 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLF 129 (396)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred ChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEE
Confidence 3468999999999999999999985 578999999974322 22345678899999887 8999999999999999999
Q ss_pred EEEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-------
Q 045127 312 IVTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------- 383 (508)
Q Consensus 312 lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------- 383 (508)
+||||+++|+|..++. ...+++..+..++.||+.||+|||++ ||+||||||+|||++.++.+||+|||++.
T Consensus 130 lV~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~-givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~ 208 (396)
T 4dc2_A 130 FVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER-GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD 208 (396)
T ss_dssp EEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTC
T ss_pred EEEEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC-CEEeccCCHHHEEECCCCCEEEeecceeeecccCCC
Confidence 9999999999999987 57899999999999999999999999 99999999999999999999999999753
Q ss_pred --------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcc---cHHHHHHHhccchhhhhhhhcccC
Q 045127 384 --------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEA---GFIEYIRMHYPENLQLVVDERMML 440 (508)
Q Consensus 384 --------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~ 440 (508)
.++.++|||||||++|||++|+.||........ ...... ...+....+..
T Consensus 209 ~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~-------~~~i~~~~~~~ 281 (396)
T 4dc2_A 209 TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYL-------FQVILEKQIRI 281 (396)
T ss_dssp CBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHH-------HHHHHHCCCCC
T ss_pred ccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHH-------HHHHhccccCC
Confidence 345689999999999999999999964321110 000111 01111111111
Q ss_pred CcchHHHHHHHHHHHHhcCCCCCCCCCCH------HHHHHH
Q 045127 441 TENMFDQAEQGLGLGLMCTDQPTGKLPSL------VQIYNM 475 (508)
Q Consensus 441 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~------~evl~~ 475 (508)
+. .....+.+++.+||+.||++||++ +||++.
T Consensus 282 p~---~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~H 319 (396)
T 4dc2_A 282 PR---SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 319 (396)
T ss_dssp CT---TSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHS
T ss_pred CC---cCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcC
Confidence 11 123457788999999999999985 666653
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-37 Score=299.48 Aligned_cols=226 Identities=16% Similarity=0.197 Sum_probs=183.0
Q ss_pred hhcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCC-CHHHHHHHHHHHHHHhhcCCCCccceeeEEe--cCCeeE
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDV-SREIRDEFVEECKLLVQFQHKNLIRVLGWNN--SRRTRA 311 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~--~~~~~~ 311 (508)
..++|+..+.||+|+||.||+|... +++.||+|.+.... .....+.+.+|+.++++++||||+++++++. .....+
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 83 (279)
T 2w5a_A 4 RAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLY 83 (279)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEE
T ss_pred chhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEE
Confidence 3578999999999999999999984 68999999997543 3456778999999999999999999999875 457889
Q ss_pred EEEeecCCCCHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHhhCCC-----ccccCCCCCCEEecCCCceEEeeccC
Q 045127 312 IVTEWTNGGNVELWLS-----ESAPSWKHRLKVLIGVVEAMCYLQEQWP-----EVDYDLRTGSVLLTDNLEPLISRFKI 381 (508)
Q Consensus 312 lv~e~~~~gsL~~~l~-----~~~l~~~~~~~i~~~i~~~L~~LH~~~~-----iiH~Dlkp~NIll~~~~~~kl~Dfg~ 381 (508)
+||||+++++|.+++. ...+++..+..++.|++.||+|||+. + ++||||||+||+++.++.+||+|||.
T Consensus 84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~-~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~ 162 (279)
T 2w5a_A 84 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR-SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGL 162 (279)
T ss_dssp EEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH-C------CCCCCSGGGEEECSSSCEEECCCCH
T ss_pred EEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc-cCCCCeeEEeccchhhEEEcCCCCEEEecCch
Confidence 9999999999999997 23499999999999999999999999 8 99999999999999999999999986
Q ss_pred C---------------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhh
Q 045127 382 E---------------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVV 434 (508)
Q Consensus 382 ~---------------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (508)
+ ..++.++||||||+++|||++|+.||...... .+...+.....
T Consensus 163 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~i~~~~~------- 233 (279)
T 2w5a_A 163 ARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK--ELAGKIREGKF------- 233 (279)
T ss_dssp HHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHTCC-------
T ss_pred heeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHH--HHHHHHhhccc-------
Confidence 3 13466799999999999999999999754311 11111111110
Q ss_pred hhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHH
Q 045127 435 DERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMIT 477 (508)
Q Consensus 435 ~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~ 477 (508)
+.+. ......+.+++.+||+.||.+|||+.|+++.+.
T Consensus 234 -~~~~-----~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~ 270 (279)
T 2w5a_A 234 -RRIP-----YRYSDELNEIITRMLNLKDYHRPSVEEILENPL 270 (279)
T ss_dssp -CCCC-----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTT
T ss_pred -ccCC-----cccCHHHHHHHHHHcCCCcccCCCHHHHHhChh
Confidence 0110 012346778999999999999999999998654
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-38 Score=309.54 Aligned_cols=232 Identities=16% Similarity=0.268 Sum_probs=168.8
Q ss_pred HhhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEE
Q 045127 235 AATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIV 313 (508)
Q Consensus 235 ~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 313 (508)
...++|+..+.||+|+||.||+|.. .+++.||||++.........+.+.+|+.++++++||||+++++++...+..++|
T Consensus 12 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (303)
T 2vwi_A 12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLV 91 (303)
T ss_dssp -CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEE
T ss_pred cchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEE
Confidence 3457899999999999999999996 468999999986554444567789999999999999999999999999999999
Q ss_pred EeecCCCCHHHHhc---------cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC--
Q 045127 314 TEWTNGGNVELWLS---------ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE-- 382 (508)
Q Consensus 314 ~e~~~~gsL~~~l~---------~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~-- 382 (508)
|||+++++|.+++. ...+++..+..++.|++.||+|||++ |++||||||+||+++.++.+||+|||.+
T Consensus 92 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~ 170 (303)
T 2vwi_A 92 MKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN-GQIHRDVKAGNILLGEDGSVQIADFGVSAF 170 (303)
T ss_dssp EECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCSGGGEEECTTCCEEECCCHHHHH
T ss_pred ehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC-CCCCCCCChhhEEEcCCCCEEEEeccchhe
Confidence 99999999999986 34589999999999999999999999 9999999999999999999999999752
Q ss_pred -------------------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhh
Q 045127 383 -------------------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQ 431 (508)
Q Consensus 383 -------------------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~ 431 (508)
..++.++||||||+++|||++|+.||........ .............
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--~~~~~~~~~~~~~ 248 (303)
T 2vwi_A 171 LATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKV--LMLTLQNDPPSLE 248 (303)
T ss_dssp CC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGH--HHHHHTSSCCCTT
T ss_pred eccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhH--HHHHhccCCCccc
Confidence 1356789999999999999999999975432221 1111111111111
Q ss_pred h-hhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 432 L-VVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 432 ~-~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
. ..++.... .....+.+++.+||+.||++|||+.|+++
T Consensus 249 ~~~~~~~~~~-----~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 249 TGVQDKEMLK-----KYGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp C-----CCCC-----CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred cccccchhhh-----hhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 0 11111100 11345778999999999999999999986
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-37 Score=303.01 Aligned_cols=224 Identities=16% Similarity=0.239 Sum_probs=181.0
Q ss_pred hhcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEE
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVT 314 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 314 (508)
..+.|+..+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.++++++||||+++++++..++..++||
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 95 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS-EEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMI 95 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC-----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEE
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCC-HHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEE
Confidence 4578999999999999999999985 58999999986432 234678899999999999999999999999999999999
Q ss_pred eecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC----------
Q 045127 315 EWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE---------- 382 (508)
Q Consensus 315 e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~---------- 382 (508)
||+++++|.+++. ...+++..+..++.|++.||.|||++ |++||||||+||+++.++.+||+|||.+
T Consensus 96 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 174 (302)
T 2j7t_A 96 EFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK-RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKR 174 (302)
T ss_dssp ECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHHC-
T ss_pred EeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcC-CcccCCCCHHHEEECCCCCEEEEECCCCcccccccccc
Confidence 9999999999887 57799999999999999999999999 9999999999999999999999999752
Q ss_pred ----------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccC
Q 045127 383 ----------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMML 440 (508)
Q Consensus 383 ----------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 440 (508)
..++.++||||||+++|||++|+.||....... .......... +...
T Consensus 175 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~~---------~~~~- 243 (302)
T 2j7t_A 175 DSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR-VLLKIAKSDP---------PTLL- 243 (302)
T ss_dssp ----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHHHSCC---------CCCS-
T ss_pred ccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHH-HHHHHhccCC---------cccC-
Confidence 235668999999999999999999997543211 0111111000 0000
Q ss_pred CcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 441 TENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 441 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
........+.+++.+||+.||++|||+.++++
T Consensus 244 --~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 244 --TPSKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp --SGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred --CccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 00112345778999999999999999999976
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-38 Score=311.05 Aligned_cols=241 Identities=14% Similarity=0.171 Sum_probs=182.5
Q ss_pred cCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEee
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEW 316 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 316 (508)
++|+..+.||+|+||.||+|... +++.||+|++...........+.+|+.++++++||||+++++++..++..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 57889999999999999999984 78999999996544332333566899999999999999999999999999999999
Q ss_pred cCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC------------
Q 045127 317 TNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE------------ 382 (508)
Q Consensus 317 ~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~------------ 382 (508)
++ |+|.+++. ...+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||.+
T Consensus 82 ~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~ 159 (324)
T 3mtl_A 82 LD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQ-KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDN 159 (324)
T ss_dssp CS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT-TEEESSCCGGGEEECTTCCEEECSSSEEECC---------
T ss_pred cc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CccCCCcCHHHEEECCCCCEEEccCcccccccCCcccccc
Confidence 97 58988887 45689999999999999999999999 9999999999999999999999999863
Q ss_pred ----------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccc----hhhhhhhh------
Q 045127 383 ----------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPE----NLQLVVDE------ 436 (508)
Q Consensus 383 ----------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~------ 436 (508)
..++.++|||||||++|||++|+.||....... ....+...... ........
T Consensus 160 ~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 237 (324)
T 3mtl_A 160 EVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEE--QLHFIFRILGTPTEETWPGILSNEEFKTY 237 (324)
T ss_dssp ---CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH--HHHHHHHHHCCCCTTTSTTGGGCHHHHHT
T ss_pred ccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHHhCCCChHhchhhhcchhhccc
Confidence 235678999999999999999999997543221 11111111110 01111000
Q ss_pred cccCC--cc----hHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH--HHHHHhh
Q 045127 437 RMMLT--EN----MFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM--ITRAYKS 482 (508)
Q Consensus 437 ~l~~~--~~----~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~--L~~i~~~ 482 (508)
..... .. .......+.+++.+||+.||++|||++|+++. +.++.+.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~ 291 (324)
T 3mtl_A 238 NYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGER 291 (324)
T ss_dssp CCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCST
T ss_pred ccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhhcccc
Confidence 00000 00 00113467789999999999999999999883 5555443
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-37 Score=299.43 Aligned_cols=222 Identities=18% Similarity=0.257 Sum_probs=180.0
Q ss_pred hhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCH--HHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEE
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSR--EIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAI 312 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 312 (508)
..++|+..+.||+|+||.||+|.. .+++.||+|++...... ...+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 9 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 88 (278)
T 3cok_A 9 KIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYL 88 (278)
T ss_dssp SGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEE
T ss_pred ccccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEE
Confidence 456799999999999999999997 57899999999643211 124678999999999999999999999999999999
Q ss_pred EEeecCCCCHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-------
Q 045127 313 VTEWTNGGNVELWLSE--SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------- 383 (508)
Q Consensus 313 v~e~~~~gsL~~~l~~--~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------- 383 (508)
||||+++++|.+++.. ..+++..+..++.|++.||+|||++ |++||||||+||+++.++.+||+|||.+.
T Consensus 89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 167 (278)
T 3cok_A 89 VLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSH-GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHE 167 (278)
T ss_dssp EEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHT-TEECSSCCGGGEEECTTCCEEECCCTTCEECC----
T ss_pred EEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEEcCCCCEEEEeecceeeccCCCC
Confidence 9999999999999983 6789999999999999999999999 99999999999999999999999998742
Q ss_pred --------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcc
Q 045127 384 --------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTEN 443 (508)
Q Consensus 384 --------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 443 (508)
.++.++||||||+++|||++|+.||........ .... .........
T Consensus 168 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-----~~~~--------~~~~~~~~~- 233 (278)
T 3cok_A 168 KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT-----LNKV--------VLADYEMPS- 233 (278)
T ss_dssp ------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC----------C--------CSSCCCCCT-
T ss_pred cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH-----HHHH--------hhcccCCcc-
Confidence 235689999999999999999999975432110 0000 000110010
Q ss_pred hHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 444 MFDQAEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 444 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
.....+.+++.+||+.||++|||++++++
T Consensus 234 --~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 234 --FLSIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp --TSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred --ccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 11345678999999999999999999986
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-37 Score=299.89 Aligned_cols=224 Identities=18% Similarity=0.234 Sum_probs=182.0
Q ss_pred hhcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEec--------
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNS-------- 306 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-------- 306 (508)
..++|+..+.||+|+||.||+|... +++.||+|.+.... ..+.+|++++++++||||+++++++..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 83 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN-----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETS 83 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS-----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC----
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc-----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccc
Confidence 4567899999999999999999985 78999999996543 346789999999999999999998754
Q ss_pred --------CCeeEEEEeecCCCCHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceE
Q 045127 307 --------RRTRAIVTEWTNGGNVELWLS---ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPL 375 (508)
Q Consensus 307 --------~~~~~lv~e~~~~gsL~~~l~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~k 375 (508)
....++||||+++|+|.+++. ...+++..+..++.|++.||.|||++ ||+||||||+||+++.++.+|
T Consensus 84 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~k 162 (284)
T 2a19_B 84 SKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK-KLINRDLKPSNIFLVDTKQVK 162 (284)
T ss_dssp -----CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEEETTEEE
T ss_pred cccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeeccCCHHHEEEcCCCCEE
Confidence 345799999999999999996 36799999999999999999999999 999999999999999999999
Q ss_pred EeeccCC--------------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccch
Q 045127 376 ISRFKIE--------------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPEN 429 (508)
Q Consensus 376 l~Dfg~~--------------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 429 (508)
|+|||.+ ..++.++||||||+++|||++|..|+.... .....
T Consensus 163 l~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~-------~~~~~----- 230 (284)
T 2a19_B 163 IGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETS-------KFFTD----- 230 (284)
T ss_dssp ECCCTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHH-------HHHHH-----
T ss_pred ECcchhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHH-------HHHHH-----
Confidence 9999863 234678999999999999999999875311 11110
Q ss_pred hhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhCCC
Q 045127 430 LQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSCPI 485 (508)
Q Consensus 430 ~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~ 485 (508)
..+..+.. .....+.+++.+||+.||.+|||+.|+++.|+.+......
T Consensus 231 ---~~~~~~~~-----~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~~ 278 (284)
T 2a19_B 231 ---LRDGIISD-----IFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPEK 278 (284)
T ss_dssp ---HHTTCCCT-----TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC----
T ss_pred ---hhcccccc-----cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCCc
Confidence 11111111 1123467888999999999999999999999988765443
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-37 Score=320.03 Aligned_cols=223 Identities=15% Similarity=0.220 Sum_probs=183.4
Q ss_pred hhcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCH--HHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEE
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSR--EIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAI 312 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 312 (508)
..++|...+.||+|+||.||+|... +|+.||||++...... .....+.+|+.+++.++||||+++++++......++
T Consensus 14 ~~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~l 93 (476)
T 2y94_A 14 KIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFM 93 (476)
T ss_dssp EETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred eecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 3468999999999999999999984 7999999999643211 235678999999999999999999999999999999
Q ss_pred EEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCCC-------
Q 045127 313 VTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEYQ------- 384 (508)
Q Consensus 313 v~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~------- 384 (508)
||||+++|+|.+++. ...+++..+..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||++..
T Consensus 94 v~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~-givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~~ 172 (476)
T 2y94_A 94 VMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRH-MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFL 172 (476)
T ss_dssp EEECCSSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHTT-TEECSCCSGGGEEECTTCCEEECCCSSCEECCTTCCB
T ss_pred EEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CCCcccccHHHEEEecCCCeEEEeccchhhccccccc
Confidence 999999999999997 56799999999999999999999999 999999999999999999999999987421
Q ss_pred --------------------CCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcch
Q 045127 385 --------------------HRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENM 444 (508)
Q Consensus 385 --------------------~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 444 (508)
.+.++|||||||++|||++|+.||+..... .+...+ .+.......
T Consensus 173 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~--~~~~~i-----------~~~~~~~p~-- 237 (476)
T 2y94_A 173 RTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVP--TLFKKI-----------CDGIFYTPQ-- 237 (476)
T ss_dssp CCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSH--HHHHHH-----------HTTCCCCCT--
T ss_pred cccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHH--HHHHHH-----------hcCCcCCCc--
Confidence 245789999999999999999999753211 111111 111111111
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 445 FDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 445 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
.....+.+++.+||+.||++|||+.|+++.
T Consensus 238 -~~s~~~~~Li~~~L~~dP~~Rpt~~eil~h 267 (476)
T 2y94_A 238 -YLNPSVISLLKHMLQVDPMKRATIKDIREH 267 (476)
T ss_dssp -TCCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred -cCCHHHHHHHHHHcCCCchhCcCHHHHHhC
Confidence 113456789999999999999999999973
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-37 Score=301.08 Aligned_cols=230 Identities=10% Similarity=0.129 Sum_probs=176.8
Q ss_pred hhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHH-HHHHHHHHHhhcCCCCccceeeEEecCCeeEEE
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRD-EFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIV 313 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~-~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 313 (508)
..++|+..+.||+|+||.||+|.. .+++.||+|+++......... .+.++...++.++||||+++++++..++..++|
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv 84 (290)
T 3fme_A 5 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC 84 (290)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEE
T ss_pred cHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEE
Confidence 357899999999999999999997 578999999997654443333 444555568888999999999999999999999
Q ss_pred EeecCCCCHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-----
Q 045127 314 TEWTNGGNVELWLS-----ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY----- 383 (508)
Q Consensus 314 ~e~~~~gsL~~~l~-----~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~----- 383 (508)
|||++ |+|.+++. ...+++..+..++.|++.||+|||+++||+||||||+||+++.++.+||+|||.+.
T Consensus 85 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 163 (290)
T 3fme_A 85 MELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDD 163 (290)
T ss_dssp EECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTCCEEBCCC---------
T ss_pred Eehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecCCccccccc
Confidence 99997 48887765 46899999999999999999999995599999999999999999999999998642
Q ss_pred -------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcc
Q 045127 384 -------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERM 438 (508)
Q Consensus 384 -------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 438 (508)
.++.++||||||+++|||++|+.||.........+........+ ..
T Consensus 164 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~---------~~ 234 (290)
T 3fme_A 164 VAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSP---------QL 234 (290)
T ss_dssp ------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCC---------CC
T ss_pred ccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCCC---------Cc
Confidence 23557899999999999999999997533222222221111110 00
Q ss_pred cCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH--HHHHH
Q 045127 439 MLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYN--MITRA 479 (508)
Q Consensus 439 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~--~L~~i 479 (508)
.. ......+.+++.+||+.||++|||+.|+++ .+...
T Consensus 235 ~~----~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~hp~f~~~ 273 (290)
T 3fme_A 235 PA----DKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLH 273 (290)
T ss_dssp CT----TTSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred cc----ccCCHHHHHHHHHHhhcChhhCcCHHHHHhCcccccC
Confidence 00 112345778999999999999999999988 44443
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-37 Score=313.40 Aligned_cols=219 Identities=15% Similarity=0.169 Sum_probs=172.6
Q ss_pred CCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEeecCCC
Q 045127 242 KKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWTNGG 320 (508)
Q Consensus 242 ~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 320 (508)
..+.||+|+||.||+|.. .+|+.||+|+++... ....+.+.+|++++++++||||+++++++...+..++||||+++|
T Consensus 93 ~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~ 171 (373)
T 2x4f_A 93 KTEILGGGRFGQVHKCEETATGLKLAAKIIKTRG-MKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGG 171 (373)
T ss_dssp EEEECC-----CEEEEEETTTCCEEEEEEEECCS-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred cceEEecCcCEEEEEEEEcCCCcEEEEEEEcccc-cccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCC
Confidence 357899999999999997 568999999997543 345678999999999999999999999999999999999999999
Q ss_pred CHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEe--cCCCceEEeeccCCC-------------
Q 045127 321 NVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLL--TDNLEPLISRFKIEY------------- 383 (508)
Q Consensus 321 sL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll--~~~~~~kl~Dfg~~~------------- 383 (508)
+|.+++. ...+++..+..++.||+.||+|||+. ||+||||||+|||+ +.++.+||+|||++.
T Consensus 172 ~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~~~~~g 250 (373)
T 2x4f_A 172 ELFDRIIDESYNLTELDTILFMKQICEGIRHMHQM-YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFG 250 (373)
T ss_dssp EEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBCCCCCS
T ss_pred cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccccccccC
Confidence 9999886 44689999999999999999999999 99999999999999 567899999999752
Q ss_pred -------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHHHH
Q 045127 384 -------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQAEQ 450 (508)
Q Consensus 384 -------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 450 (508)
.++.++|||||||++|||++|+.||....... .+.......+. ...+.. ......
T Consensus 251 t~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~-~~~~i~~~~~~-----~~~~~~------~~~~~~ 318 (373)
T 2x4f_A 251 TPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAE-TLNNILACRWD-----LEDEEF------QDISEE 318 (373)
T ss_dssp SCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHHHHTCCC-----SCSGGG------TTSCHH
T ss_pred CCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHhccCC-----CChhhh------ccCCHH
Confidence 23457899999999999999999997533211 11111111100 000000 112456
Q ss_pred HHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 451 GLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 451 l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
+.+++.+||+.||.+|||+.|+++
T Consensus 319 ~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 319 AKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp HHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHcCCChhhCCCHHHHhc
Confidence 788999999999999999999997
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-37 Score=312.04 Aligned_cols=225 Identities=16% Similarity=0.199 Sum_probs=180.9
Q ss_pred HHHhhcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCC--HHHHHHHHHHHHHHhhc-CCCCccceeeEEecCC
Q 045127 233 LKAATNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVS--REIRDEFVEECKLLVQF-QHKNLIRVLGWNNSRR 308 (508)
Q Consensus 233 l~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 308 (508)
.....++|+..+.||+|+||.||+|+.. +|+.||+|+++.... ......+..|..++..+ +||||+++++++.+.+
T Consensus 12 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~ 91 (345)
T 1xjd_A 12 IKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKE 91 (345)
T ss_dssp ----CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS
T ss_pred CCCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCC
Confidence 3456688999999999999999999984 689999999964321 12346678899999887 8999999999999999
Q ss_pred eeEEEEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC----
Q 045127 309 TRAIVTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY---- 383 (508)
Q Consensus 309 ~~~lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~---- 383 (508)
..|+||||+++|+|.+++. ...+++..+..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||++.
T Consensus 92 ~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 170 (345)
T 1xjd_A 92 NLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSK-GIVYRDLKLDNILLDKDGHIKIADFGMCKENML 170 (345)
T ss_dssp EEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEeCCCChhhEEECCCCCEEEeEChhhhhccc
Confidence 9999999999999999998 57899999999999999999999999 99999999999999999999999999743
Q ss_pred -----------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccC
Q 045127 384 -----------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMML 440 (508)
Q Consensus 384 -----------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 440 (508)
.++.++|||||||++|||++|+.||...... .+...+... .+.+.
T Consensus 171 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--~~~~~i~~~---------~~~~p- 238 (345)
T 1xjd_A 171 GDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE--ELFHSIRMD---------NPFYP- 238 (345)
T ss_dssp TTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHC---------CCCCC-
T ss_pred CCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHH--HHHHHHHhC---------CCCCC-
Confidence 2466789999999999999999999753221 111111110 00111
Q ss_pred CcchHHHHHHHHHHHHhcCCCCCCCCCCHH-HHHH
Q 045127 441 TENMFDQAEQGLGLGLMCTDQPTGKLPSLV-QIYN 474 (508)
Q Consensus 441 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~-evl~ 474 (508)
. .....+.+++.+||+.||++||++. |+++
T Consensus 239 -~---~~s~~~~~li~~lL~~dp~~R~~~~~~i~~ 269 (345)
T 1xjd_A 239 -R---WLEKEAKDLLVKLFVREPEKRLGVRGDIRQ 269 (345)
T ss_dssp -T---TSCHHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred -c---ccCHHHHHHHHHHhcCCHhHcCCChHHHHc
Confidence 0 1234577889999999999999997 6653
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-36 Score=305.84 Aligned_cols=231 Identities=17% Similarity=0.216 Sum_probs=186.0
Q ss_pred HHHHHhhcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCC-------HHHHHHHHHHHHHHhhc-CCCCcccee
Q 045127 231 WMLKAATNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVS-------REIRDEFVEECKLLVQF-QHKNLIRVL 301 (508)
Q Consensus 231 ~~l~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-------~~~~~~~~~E~~~l~~l-~h~niv~~~ 301 (508)
.......++|+..+.||+|+||.||+|... +|+.||||+++.... ....+.+.+|+.+++++ +||||++++
T Consensus 87 ~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 166 (365)
T 2y7j_A 87 AAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLI 166 (365)
T ss_dssp HHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEE
T ss_pred hhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEE
Confidence 334456678999999999999999999985 799999999965431 12256788999999999 799999999
Q ss_pred eEEecCCeeEEEEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeecc
Q 045127 302 GWNNSRRTRAIVTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFK 380 (508)
Q Consensus 302 ~~~~~~~~~~lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg 380 (508)
+++......++||||+++++|.+++. ...+++..+..++.||+.||.|||+. ||+||||||+||+++.++.+||+|||
T Consensus 167 ~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~-gi~H~Dlkp~NIl~~~~~~ikl~DfG 245 (365)
T 2y7j_A 167 DSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHAN-NIVHRDLKPENILLDDNMQIRLSDFG 245 (365)
T ss_dssp EEEEBSSEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTCCEEECCCT
T ss_pred EEEeeCCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEECCCCCEEEEecC
Confidence 99999999999999999999999998 56799999999999999999999999 99999999999999999999999998
Q ss_pred CCC--------------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccc
Q 045127 381 IEY--------------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPE 428 (508)
Q Consensus 381 ~~~--------------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 428 (508)
++. .++.++|||||||++|||++|+.||...... .....+......
T Consensus 246 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~--~~~~~i~~~~~~ 323 (365)
T 2y7j_A 246 FSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQI--LMLRMIMEGQYQ 323 (365)
T ss_dssp TCEECCTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHTCCC
T ss_pred cccccCCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHH--HHHHHHHhCCCC
Confidence 642 2556899999999999999999999743211 111111111000
Q ss_pred hhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 429 NLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 429 ~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
...+... .....+.+++.+||+.||++|||+.|+++
T Consensus 324 ----~~~~~~~------~~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 324 ----FSSPEWD------DRSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp ----CCHHHHS------SSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred ----CCCcccc------cCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 0000000 11345778999999999999999999986
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-37 Score=315.94 Aligned_cols=228 Identities=15% Similarity=0.131 Sum_probs=178.7
Q ss_pred HhhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCC-------HHHHHHHHHHHHHHhhcCCCCccceeeEEec
Q 045127 235 AATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVS-------REIRDEFVEECKLLVQFQHKNLIRVLGWNNS 306 (508)
Q Consensus 235 ~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~-------~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 306 (508)
...++|...+.||+|+||.||+|.. .+++.||||++..... ......+.+|+.++++++||||+++++++..
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~ 211 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA 211 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence 4567899999999999999999997 4689999999864321 1123358899999999999999999999764
Q ss_pred CCeeEEEEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCC---CceEEeeccCC
Q 045127 307 RRTRAIVTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDN---LEPLISRFKIE 382 (508)
Q Consensus 307 ~~~~~lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~---~~~kl~Dfg~~ 382 (508)
+..++||||+++|+|.+++. ...+++.++..++.|++.||+|||++ +|+||||||+|||++.+ +.+||+|||++
T Consensus 212 -~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~-~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a 289 (419)
T 3i6u_A 212 -EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN-GIIHRDLKPENVLLSSQEEDCLIKITDFGHS 289 (419)
T ss_dssp -SEEEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEESSSSSSCCEEECCSSTT
T ss_pred -CceEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCChHhEEEecCCCcceEEEeecccc
Confidence 55799999999999999887 67799999999999999999999999 99999999999999754 45999999875
Q ss_pred CC-----------------------------CCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhh
Q 045127 383 YQ-----------------------------HRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLV 433 (508)
Q Consensus 383 ~~-----------------------------~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (508)
.. ++.++|||||||++|||++|+.||....... .+...+.........+.
T Consensus 290 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~-~~~~~i~~~~~~~~~~~ 368 (419)
T 3i6u_A 290 KILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV-SLKDQITSGKYNFIPEV 368 (419)
T ss_dssp TSCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSC-CHHHHHHTTCCCCCHHH
T ss_pred eecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchH-HHHHHHhcCCCCCCchh
Confidence 31 2347899999999999999999997543222 22222222111100100
Q ss_pred hhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 434 VDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 434 ~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
. ......+.+++.+||+.||++|||++|+++.
T Consensus 369 ~----------~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 400 (419)
T 3i6u_A 369 W----------AEVSEKALDLVKKLLVVDPKARFTTEEALRH 400 (419)
T ss_dssp H----------TTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred h----------cccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 0 0124567789999999999999999999873
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-37 Score=298.98 Aligned_cols=222 Identities=13% Similarity=0.187 Sum_probs=182.6
Q ss_pred hcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCH--HHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEE
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSR--EIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIV 313 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 313 (508)
.++|+..+.||+|+||.||+|... +++.||+|++...... .....+.+|++++++++||||+++++++.+.+..++|
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 92 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM 92 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence 467999999999999999999974 5789999998543211 1246789999999999999999999999999999999
Q ss_pred EeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC----------
Q 045127 314 TEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE---------- 382 (508)
Q Consensus 314 ~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~---------- 382 (508)
|||+++|+|.+++. ...+++..+..++.|++.||+|||++ |++||||||+||+++.++.+||+|||.+
T Consensus 93 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 171 (284)
T 2vgo_A 93 LEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER-KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRT 171 (284)
T ss_dssp ECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTT-TEECCCCSGGGEEECTTCCEEECCCTTCEECSSSCBCC
T ss_pred EEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CceecCCCHHHEEEcCCCCEEEecccccccCccccccc
Confidence 99999999999987 56799999999999999999999999 9999999999999999999999999864
Q ss_pred ---------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHH
Q 045127 383 ---------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQ 447 (508)
Q Consensus 383 ---------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 447 (508)
..++.++||||||+++|||++|+.||....... . ... +......... ..
T Consensus 172 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~---~~~--------~~~~~~~~~~---~~ 235 (284)
T 2vgo_A 172 MCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE--T---HRR--------IVNVDLKFPP---FL 235 (284)
T ss_dssp CCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH--H---HHH--------HHTTCCCCCT---TS
T ss_pred ccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhH--H---HHH--------HhccccCCCC---cC
Confidence 235678999999999999999999997432111 1 111 1111111111 11
Q ss_pred HHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 448 AEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 448 ~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
...+.+++.+|++.||.+|||++|+++.
T Consensus 236 ~~~~~~li~~~l~~~p~~Rps~~~ll~h 263 (284)
T 2vgo_A 236 SDGSKDLISKLLRYHPPQRLPLKGVMEH 263 (284)
T ss_dssp CHHHHHHHHHHSCSSGGGSCCHHHHHTC
T ss_pred CHHHHHHHHHHhhcCHhhCCCHHHHhhC
Confidence 3456789999999999999999999974
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-37 Score=297.48 Aligned_cols=222 Identities=16% Similarity=0.162 Sum_probs=179.3
Q ss_pred HhhcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCC-CHHHHHHHHHHHHHHhhc-CCCCccceeeEEecCCeeE
Q 045127 235 AATNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDV-SREIRDEFVEECKLLVQF-QHKNLIRVLGWNNSRRTRA 311 (508)
Q Consensus 235 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 311 (508)
+..++|+..+.||+|+||.||+|... +++.||+|++.... .......+.+|+..+.++ +||||+++++++.+++..+
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~ 87 (289)
T 1x8b_A 8 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHML 87 (289)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEE
T ss_pred cccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEE
Confidence 34578999999999999999999985 78999999997543 234567888999999999 8999999999999999999
Q ss_pred EEEeecCCCCHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCC---------------
Q 045127 312 IVTEWTNGGNVELWLSE-----SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDN--------------- 371 (508)
Q Consensus 312 lv~e~~~~gsL~~~l~~-----~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~--------------- 371 (508)
+||||+++++|.+++.. ..+++.++..++.|++.||+|||++ ||+||||||+||+++.+
T Consensus 88 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~ 166 (289)
T 1x8b_A 88 IQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM-SLVHMDIKPSNIFISRTSIPNAASEEGDEDDW 166 (289)
T ss_dssp EEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEC-----------------
T ss_pred EEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC-CEeecCCCHHHEEEcCCCCCcccccccccccc
Confidence 99999999999999972 6799999999999999999999999 99999999999999844
Q ss_pred ----CceEEeeccCCC------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHH
Q 045127 372 ----LEPLISRFKIEY------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIR 423 (508)
Q Consensus 372 ----~~~kl~Dfg~~~------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~ 423 (508)
..+||+|||.+. .++.++|||||||++|||++|..|+.... ... .+.
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~----~~~-~~~ 241 (289)
T 1x8b_A 167 ASNKVMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD----QWH-EIR 241 (289)
T ss_dssp ---CCCEEECCCTTCEETTCSCCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH----HHH-HHH
T ss_pred cCCceEEEEcccccccccCCccccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh----HHH-HHH
Confidence 479999998742 22357999999999999999988764221 111 111
Q ss_pred HhccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 424 MHYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 424 ~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
... .+.+.. .....+.+++.+||+.||++|||+.|+++.
T Consensus 242 ~~~--------~~~~~~-----~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 280 (289)
T 1x8b_A 242 QGR--------LPRIPQ-----VLSQEFTELLKVMIHPDPERRPSAMALVKH 280 (289)
T ss_dssp TTC--------CCCCSS-----CCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred cCC--------CCCCCc-----ccCHHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence 100 011110 113457789999999999999999999863
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-37 Score=320.22 Aligned_cols=223 Identities=19% Similarity=0.187 Sum_probs=175.1
Q ss_pred hhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCC--CCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEE
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGD--VSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAI 312 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 312 (508)
..++|+..+.||+|+||.||+|.. .+|+.||||++... ........+.+|+.+++.++||||+++++++...+..++
T Consensus 146 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 225 (446)
T 4ejn_A 146 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCF 225 (446)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEE
T ss_pred ChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEE
Confidence 346799999999999999999997 46899999999643 122345678899999999999999999999999999999
Q ss_pred EEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhh-CCCccccCCCCCCEEecCCCceEEeeccCCC-------
Q 045127 313 VTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQE-QWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------- 383 (508)
Q Consensus 313 v~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~-~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------- 383 (508)
||||+++|+|.+++. ...+++..+..++.|++.||+|||+ . ||+||||||+|||++.++.+||+|||++.
T Consensus 226 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~-giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 304 (446)
T 4ejn_A 226 VMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK-NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA 304 (446)
T ss_dssp EECCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHT-CCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC---
T ss_pred EEeeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcC-CEEECCCCHHHEEECCCCCEEEccCCCceeccCCCc
Confidence 999999999999987 6789999999999999999999998 8 99999999999999999999999999742
Q ss_pred --------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcc
Q 045127 384 --------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTEN 443 (508)
Q Consensus 384 --------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 443 (508)
.++.++|||||||++|||++|+.||...... .+...+. ........
T Consensus 305 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--~~~~~i~-----------~~~~~~p~- 370 (446)
T 4ejn_A 305 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--KLFELIL-----------MEEIRFPR- 370 (446)
T ss_dssp --CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHH-----------HCCCCCCT-
T ss_pred ccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH--HHHHHHH-----------hCCCCCCc-
Confidence 3567899999999999999999999743211 1111111 11111111
Q ss_pred hHHHHHHHHHHHHhcCCCCCCCCC-----CHHHHHHH
Q 045127 444 MFDQAEQGLGLGLMCTDQPTGKLP-----SLVQIYNM 475 (508)
Q Consensus 444 ~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~ 475 (508)
.....+.+++.+||+.||.+|| |++|+++.
T Consensus 371 --~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~h 405 (446)
T 4ejn_A 371 --TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH 405 (446)
T ss_dssp --TSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred --cCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhC
Confidence 1134577899999999999999 99999873
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-37 Score=306.58 Aligned_cols=220 Identities=15% Similarity=0.180 Sum_probs=173.6
Q ss_pred CceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcC-CCCccceeeEEecCCeeEEEEeecCCC
Q 045127 243 KNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQ-HKNLIRVLGWNNSRRTRAIVTEWTNGG 320 (508)
Q Consensus 243 ~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~g 320 (508)
.+.||+|+||.||+|... +++.||||++... ....+.+|+.+++.+. ||||+++++++.++...++||||+++|
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~ 91 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR----MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGG 91 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG----GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh----hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCC
Confidence 478999999999999984 6899999999542 3467789999999997 999999999999999999999999999
Q ss_pred CHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCC---ceEEeeccCCC-------------
Q 045127 321 NVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNL---EPLISRFKIEY------------- 383 (508)
Q Consensus 321 sL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~---~~kl~Dfg~~~------------- 383 (508)
+|.+++. ...+++.++..++.|++.||+|||++ ||+||||||+||+++.++ .+||+|||.+.
T Consensus 92 ~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~-~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 170 (325)
T 3kn6_A 92 ELFERIKKKKHFSETEASYIMRKLVSAVSHMHDV-GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPC 170 (325)
T ss_dssp BHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC---------
T ss_pred cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCcccccC
Confidence 9999998 66799999999999999999999999 999999999999998665 89999998752
Q ss_pred --------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCc--ccHHHHHHHhccchhhhhhhhcccCCc-chHH
Q 045127 384 --------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGE--AGFIEYIRMHYPENLQLVVDERMMLTE-NMFD 446 (508)
Q Consensus 384 --------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~ 446 (508)
.++.++|||||||++|||++|+.||....... ......... +......... ....
T Consensus 171 ~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~--------i~~~~~~~~~~~~~~ 242 (325)
T 3kn6_A 171 FTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKK--------IKKGDFSFEGEAWKN 242 (325)
T ss_dssp -------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHH--------HTTTCCCCCSHHHHT
T ss_pred CCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHH--------HHcCCCCCCcccccC
Confidence 24567899999999999999999997543211 111111111 1111111110 0012
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 447 QAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 447 ~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
....+.+++.+||+.||.+|||++|+++.
T Consensus 243 ~s~~~~~li~~~L~~dP~~Rpt~~ell~h 271 (325)
T 3kn6_A 243 VSQEAKDLIQGLLTVDPNKRLKMSGLRYN 271 (325)
T ss_dssp SCHHHHHHHHHHHCCCTTTCCCTTTSTTC
T ss_pred CCHHHHHHHHHHCCCChhHCCCHHHHhcC
Confidence 24567889999999999999999998753
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-37 Score=299.18 Aligned_cols=223 Identities=14% Similarity=0.169 Sum_probs=184.3
Q ss_pred hhcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCC--CHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEE
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDV--SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAI 312 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 312 (508)
..++|...+.||+|+||.||+|... +++.||+|++.... .....+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 92 (294)
T 2rku_A 13 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV 92 (294)
T ss_dssp TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred cccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEE
Confidence 3467889999999999999999985 58899999986432 34456789999999999999999999999999999999
Q ss_pred EEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC--------
Q 045127 313 VTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY-------- 383 (508)
Q Consensus 313 v~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~-------- 383 (508)
||||+++++|.+++. ...+++.++..++.|+++||+|||++ |++||||||+||+++.++.+||+|||.+.
T Consensus 93 v~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 171 (294)
T 2rku_A 93 VLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN-RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER 171 (294)
T ss_dssp EEECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTCCEEECCCTTCEECCSTTCC
T ss_pred EEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCChHhEEEcCCCCEEEEeccCceecccCccc
Confidence 999999999999987 56799999999999999999999999 99999999999999999999999998742
Q ss_pred -------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcch
Q 045127 384 -------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENM 444 (508)
Q Consensus 384 -------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 444 (508)
.++.++||||||+++|||++|+.||......+ .... +.........
T Consensus 172 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-----~~~~--------~~~~~~~~~~-- 236 (294)
T 2rku_A 172 KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE-----TYLR--------IKKNEYSIPK-- 236 (294)
T ss_dssp BCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH-----HHHH--------HHTTCCCCCT--
T ss_pred cccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-----HHHH--------HhhccCCCcc--
Confidence 24568999999999999999999997532111 1111 0111111111
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 445 FDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 445 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
.....+.+++.+||+.||++|||++|+++.
T Consensus 237 -~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 237 -HINPVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp -TSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred -ccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 113456788999999999999999999975
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-37 Score=308.81 Aligned_cols=223 Identities=15% Similarity=0.186 Sum_probs=181.1
Q ss_pred hhcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCC--HHHHHHHHHHHHHHhhc-CCCCccceeeEEecCCeeE
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVS--REIRDEFVEECKLLVQF-QHKNLIRVLGWNNSRRTRA 311 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 311 (508)
..++|+..+.||+|+||.||+|+.. +++.||+|+++.... ....+.+..|..++..+ +||+|+++++++.+.+..|
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 4578999999999999999999985 478999999964321 12356788999999988 7999999999999999999
Q ss_pred EEEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-------
Q 045127 312 IVTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------- 383 (508)
Q Consensus 312 lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------- 383 (508)
+||||+++|+|.+++. ...+++..+..++.||+.||+|||++ ||+||||||+|||++.++.+||+|||++.
T Consensus 98 lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~-givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~ 176 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSK-GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV 176 (353)
T ss_dssp EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTC
T ss_pred EEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CEEeccCCHHHEEEcCCCcEEEEeCCcccccccCCc
Confidence 9999999999999998 57899999999999999999999999 99999999999999999999999999753
Q ss_pred --------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcc
Q 045127 384 --------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTEN 443 (508)
Q Consensus 384 --------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 443 (508)
.++.++|||||||++|||++|+.||...... .+... +....+....
T Consensus 177 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~--~~~~~-----------i~~~~~~~p~- 242 (353)
T 2i0e_A 177 TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED--ELFQS-----------IMEHNVAYPK- 242 (353)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHH-----------HHHCCCCCCT-
T ss_pred ccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHH--HHHHH-----------HHhCCCCCCC-
Confidence 2456789999999999999999999753211 11111 1111111111
Q ss_pred hHHHHHHHHHHHHhcCCCCCCCCCC-----HHHHHHH
Q 045127 444 MFDQAEQGLGLGLMCTDQPTGKLPS-----LVQIYNM 475 (508)
Q Consensus 444 ~~~~~~~l~~l~~~Cl~~dP~~RPs-----~~evl~~ 475 (508)
.....+.+++.+||+.||.+||+ ++|+++.
T Consensus 243 --~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h 277 (353)
T 2i0e_A 243 --SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 277 (353)
T ss_dssp --TSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred --CCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 12346778899999999999995 5777754
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-37 Score=304.85 Aligned_cols=238 Identities=13% Similarity=0.187 Sum_probs=178.4
Q ss_pred HHhhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCH-HHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeE
Q 045127 234 KAATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSR-EIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRA 311 (508)
Q Consensus 234 ~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 311 (508)
....++|+..+.||+|+||.||+|.. .+++.||||+++..... .....+.+|+.++++++||||+++++++..+...+
T Consensus 30 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 109 (329)
T 3gbz_A 30 ATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLH 109 (329)
T ss_dssp --CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEE
T ss_pred ccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEE
Confidence 35567899999999999999999997 46899999999654332 23567789999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEec-----CCCceEEeeccCC---
Q 045127 312 IVTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLT-----DNLEPLISRFKIE--- 382 (508)
Q Consensus 312 lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~-----~~~~~kl~Dfg~~--- 382 (508)
+||||+++ +|.+++. ...+++..+..++.|++.||+|||++ ||+||||||+||+++ .++.+||+|||.+
T Consensus 110 lv~e~~~~-~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~-~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~ 187 (329)
T 3gbz_A 110 LIFEYAEN-DLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSR-RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAF 187 (329)
T ss_dssp EEEECCSE-EHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHH
T ss_pred EEEecCCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC-CEECCCCCHHHEEEecCCCCccceEEECcCCCcccc
Confidence 99999974 9999987 56799999999999999999999999 999999999999994 4556999999852
Q ss_pred -------------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHh-ccch--hhhhh
Q 045127 383 -------------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMH-YPEN--LQLVV 434 (508)
Q Consensus 383 -------------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~-~~~~--~~~~~ 434 (508)
..++.++|||||||++|||++|+.||....... .+....... .+.. .....
T Consensus 188 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 266 (329)
T 3gbz_A 188 GIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEID-QLFKIFEVLGLPDDTTWPGVT 266 (329)
T ss_dssp C-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCTTTSTTGG
T ss_pred CCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHH-HHHHHHHHhCCCchhhhhhhh
Confidence 236788999999999999999999997543221 111111111 0000 00000
Q ss_pred -----hhcc---cCCcc----hHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 435 -----DERM---MLTEN----MFDQAEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 435 -----~~~l---~~~~~----~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
.... ..... .......+.+++.+||+.||++|||++|+++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 267 ALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp GSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 0000 00000 0002356788999999999999999999986
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-37 Score=303.02 Aligned_cols=231 Identities=21% Similarity=0.282 Sum_probs=177.2
Q ss_pred hcCCCCCceeeecCCeEEEEEEEC--CCC--EEEEEEecCCC--CHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCee
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGILR--DGT--RVKIEIYKGDV--SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTR 310 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~--~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 310 (508)
.++|+..+.||+|+||.||+|.+. +++ .||+|+++... .....+.+.+|++++++++||||+++++++..+. .
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 95 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M 95 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence 457899999999999999999863 333 68999986542 2245678999999999999999999999998765 7
Q ss_pred EEEEeecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCCC----
Q 045127 311 AIVTEWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEYQ---- 384 (508)
Q Consensus 311 ~lv~e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~---- 384 (508)
++||||+++++|.+++. ...+++..+..++.|++.||+|||++ |++||||||+||+++.++.+||+|||.+..
T Consensus 96 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 174 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK-RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQN 174 (291)
T ss_dssp EEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEEEETTEEEECCCTTCEECCC-
T ss_pred eeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhC-CcccCCCchheEEEcCCCCEEEcccccccccccc
Confidence 89999999999999997 45699999999999999999999999 999999999999999999999999987421
Q ss_pred --------------------------CCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhc
Q 045127 385 --------------------------HRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDER 437 (508)
Q Consensus 385 --------------------------~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (508)
++.++||||||+++|||++ |+.||...... .....+.. .. ..
T Consensus 175 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~~~~~---~~------~~ 243 (291)
T 1u46_A 175 DDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS--QILHKIDK---EG------ER 243 (291)
T ss_dssp CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHHHHT---SC------CC
T ss_pred ccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHH--HHHHHHHc---cC------CC
Confidence 2447899999999999999 99999754321 11111110 00 00
Q ss_pred ccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhC
Q 045127 438 MMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSC 483 (508)
Q Consensus 438 l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 483 (508)
.... ......+.+++.+||+.||++|||+.++++.|+++.+..
T Consensus 244 ~~~~---~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 286 (291)
T 1u46_A 244 LPRP---EDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTD 286 (291)
T ss_dssp CCCC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred CCCC---cCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCccc
Confidence 0000 122456788999999999999999999999999886543
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-37 Score=309.31 Aligned_cols=218 Identities=13% Similarity=0.184 Sum_probs=181.1
Q ss_pred HhhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCH-------HHHHHHHHHHHHHhhcCCCCccceeeEEec
Q 045127 235 AATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSR-------EIRDEFVEECKLLVQFQHKNLIRVLGWNNS 306 (508)
Q Consensus 235 ~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~-------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 306 (508)
...++|+..+.||+|+||.||+|.. .+++.||||+++..... .....+.+|+.++++++||||+++++++.+
T Consensus 21 ~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~ 100 (335)
T 3dls_A 21 EYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFEN 100 (335)
T ss_dssp HHHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEEC
T ss_pred ccccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEee
Confidence 3457899999999999999999997 56899999999754321 123457789999999999999999999999
Q ss_pred CCeeEEEEeecCCC-CHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-
Q 045127 307 RRTRAIVTEWTNGG-NVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY- 383 (508)
Q Consensus 307 ~~~~~lv~e~~~~g-sL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~- 383 (508)
.+..++||||+.+| +|.+++. ...+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||.+.
T Consensus 101 ~~~~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~ 179 (335)
T 3dls_A 101 QGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLK-DIIHRDIKDENIVIAEDFTIKLIDFGSAAY 179 (335)
T ss_dssp SSEEEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred CCEEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC-CeEEeccCHHHEEEcCCCcEEEeecccceE
Confidence 99999999999777 9999998 55799999999999999999999999 99999999999999999999999998752
Q ss_pred -------------------------C-CCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhc
Q 045127 384 -------------------------Q-HRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDER 437 (508)
Q Consensus 384 -------------------------~-~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (508)
. .+.++|||||||++|||++|+.||...... ....
T Consensus 180 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-------------------~~~~ 240 (335)
T 3dls_A 180 LERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET-------------------VEAA 240 (335)
T ss_dssp CCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG-------------------TTTC
T ss_pred CCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH-------------------Hhhc
Confidence 1 145789999999999999999999743211 0111
Q ss_pred ccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 438 MMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 438 l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
..... .....+.+++.+||+.||++|||+.|+++.
T Consensus 241 ~~~~~---~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 241 IHPPY---LVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp CCCSS---CCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred cCCCc---ccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 10011 013457789999999999999999999985
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-37 Score=306.76 Aligned_cols=238 Identities=14% Similarity=0.197 Sum_probs=186.3
Q ss_pred hhcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCC-HHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEE
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVS-REIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIV 313 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 313 (508)
..++|+..+.||+|+||.||+|... +++.||+|++..... ....+.+.+|+.++++++||||+++++++......++|
T Consensus 23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 102 (331)
T 4aaa_A 23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLV 102 (331)
T ss_dssp CGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEE
Confidence 4567899999999999999999984 589999999865433 34466788999999999999999999999999999999
Q ss_pred EeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC---------
Q 045127 314 TEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY--------- 383 (508)
Q Consensus 314 ~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~--------- 383 (508)
|||+++++|.++.. ...+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||.+.
T Consensus 103 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~-~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 181 (331)
T 4aaa_A 103 FEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSH-NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVY 181 (331)
T ss_dssp EECCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTSCEEECCCTTC----------
T ss_pred EecCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHC-CEEccCcChheEEEcCCCcEEEEeCCCceeecCCcccc
Confidence 99999999998866 67799999999999999999999999 99999999999999999999999998741
Q ss_pred -------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHh--ccchhhhhhh-------
Q 045127 384 -------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMH--YPENLQLVVD------- 435 (508)
Q Consensus 384 -------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~--~~~~~~~~~~------- 435 (508)
.++.++|||||||++|||++|+.||....... .+....... ..+.......
T Consensus 182 ~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (331)
T 4aaa_A 182 DDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDID-QLYHIMMCLGNLIPRHQELFNKNPVFAG 260 (331)
T ss_dssp --CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCSCCHHHHHHHHHCGGGTT
T ss_pred CCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHH-HHHHHHHHhCCCChhhhhHhhhcccccc
Confidence 34678899999999999999999997543221 111111110 0000000000
Q ss_pred ---hcccCCcch----HHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 436 ---ERMMLTENM----FDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 436 ---~~l~~~~~~----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
+.+...... ......+.+++.+||+.||++|||+.|+++.
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 261 VRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp CCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 001000000 0124568899999999999999999999864
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-36 Score=307.36 Aligned_cols=237 Identities=14% Similarity=0.184 Sum_probs=178.5
Q ss_pred hhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCC-CHHHHHHHHHHHHHHhhcCCCCccceeeEEecCC-----
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDV-SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRR----- 308 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~----- 308 (508)
..++|+..+.||+|+||.||+|.. .+|+.||||++.... .....+++.+|++++++++||||+++++++....
T Consensus 23 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 102 (367)
T 1cm8_A 23 VRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDF 102 (367)
T ss_dssp CBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTC
T ss_pred ecceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccC
Confidence 356899999999999999999997 568999999996443 3345678899999999999999999999997653
Q ss_pred -eeEEEEeecCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC-----
Q 045127 309 -TRAIVTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE----- 382 (508)
Q Consensus 309 -~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~----- 382 (508)
..|+||||+ +++|.+++....+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++
T Consensus 103 ~~~~lv~e~~-~~~L~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~-~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 180 (367)
T 1cm8_A 103 TDFYLVMPFM-GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAA-GIIHRDLKPGNLAVNEDCELKILDFGLARQADS 180 (367)
T ss_dssp CCCEEEEECC-SEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred ceEEEEEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCcCHHHEEEcCCCCEEEEeeeccccccc
Confidence 459999999 88999999888899999999999999999999999 9999999999999999999999999874
Q ss_pred --------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhc--cchh---------h
Q 045127 383 --------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHY--PENL---------Q 431 (508)
Q Consensus 383 --------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~--~~~~---------~ 431 (508)
..++.++||||+||++|||++|+.||....... .+........ +... .
T Consensus 181 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~l~~i~~~~g~~~~~~~~~~~~~~~~ 259 (367)
T 1cm8_A 181 EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLD-QLKEIMKVTGTPPAEFVQRLQSDEAK 259 (367)
T ss_dssp SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCHHHHHTCSCHHHH
T ss_pred ccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcCCCCHHHHHHhhhHHHH
Confidence 246778999999999999999999997543211 1111111100 0000 0
Q ss_pred hhhhhc--ccCC---cchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 432 LVVDER--MMLT---ENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 432 ~~~~~~--l~~~---~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
..+... .... .........+.+++.+|++.||++|||++|+++.
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h 308 (367)
T 1cm8_A 260 NYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 308 (367)
T ss_dssp HHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence 000000 0000 0001124567889999999999999999999884
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-36 Score=300.67 Aligned_cols=226 Identities=15% Similarity=0.143 Sum_probs=177.5
Q ss_pred hhcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCC-------HHHHHHHHHHHHHHhhcCCCCccceeeEEecC
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVS-------REIRDEFVEECKLLVQFQHKNLIRVLGWNNSR 307 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-------~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 307 (508)
..++|+..+.||+|+||.||+|... +++.||||++..... ......+.+|++++++++||||+++++++..+
T Consensus 8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 87 (322)
T 2ycf_A 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 87 (322)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC
Confidence 3467999999999999999999974 588999999864321 12234588999999999999999999998765
Q ss_pred CeeEEEEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCc---eEEeeccCCC
Q 045127 308 RTRAIVTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLE---PLISRFKIEY 383 (508)
Q Consensus 308 ~~~~lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~---~kl~Dfg~~~ 383 (508)
. .++||||+++++|.+++. ...+++..+..++.|++.||+|||++ ||+||||||+||+++.++. +||+|||.+.
T Consensus 88 ~-~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~ 165 (322)
T 2ycf_A 88 D-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN-GIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 165 (322)
T ss_dssp S-EEEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEESSSSSSCCEEECCCTTCE
T ss_pred c-eEEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHHEEEecCCCCCeEEEccCccce
Confidence 5 799999999999999887 56799999999999999999999999 9999999999999987654 9999998642
Q ss_pred -----------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhh
Q 045127 384 -----------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVV 434 (508)
Q Consensus 384 -----------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (508)
.++.++|||||||++|||++|+.||....... .+...+.........+..
T Consensus 166 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~ 244 (322)
T 2ycf_A 166 ILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV-SLKDQITSGKYNFIPEVW 244 (322)
T ss_dssp ECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSS-CHHHHHHHTCCCCCHHHH
T ss_pred ecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHH-HHHHHHHhCccccCchhh
Confidence 34568999999999999999999997543222 222222211110000000
Q ss_pred hhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 435 DERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 435 ~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
......+.+++.+||+.||++|||+.|+++
T Consensus 245 ----------~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 245 ----------AEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp ----------TTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ----------hhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 012456778999999999999999999984
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-37 Score=316.97 Aligned_cols=235 Identities=14% Similarity=0.069 Sum_probs=186.1
Q ss_pred CCHHHHHHhhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCC--HHHHHHHHHHHHHHhhcCCCCccceeeEE
Q 045127 228 FTTWMLKAATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVS--REIRDEFVEECKLLVQFQHKNLIRVLGWN 304 (508)
Q Consensus 228 ~~~~~l~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~ 304 (508)
+.+.+.....++|+..+.||+|+||.||+|+. .+|+.||+|+++.... ....+.+.+|..++..++||||+++++++
T Consensus 51 ~~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~ 130 (412)
T 2vd5_A 51 VRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAF 130 (412)
T ss_dssp HHHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred hhhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEE
Confidence 34556667788999999999999999999998 4689999999964211 11234578999999999999999999999
Q ss_pred ecCCeeEEEEeecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC
Q 045127 305 NSRRTRAIVTEWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE 382 (508)
Q Consensus 305 ~~~~~~~lv~e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~ 382 (508)
.+.+..|+||||+++|+|.+++. +..+++..+..++.||+.||+|||++ ||+||||||+|||++.++.+||+|||++
T Consensus 131 ~~~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~-giiHrDLKp~NILld~~g~vkL~DFGla 209 (412)
T 2vd5_A 131 QDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRL-GYVHRDIKPDNILLDRCGHIRLADFGSC 209 (412)
T ss_dssp ECSSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred eeCCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecccCHHHeeecCCCCEEEeechhh
Confidence 99999999999999999999997 35799999999999999999999999 9999999999999999999999999864
Q ss_pred C-----------------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhcc
Q 045127 383 Y-----------------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYP 427 (508)
Q Consensus 383 ~-----------------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~ 427 (508)
. .++.++|||||||++|||++|+.||......+ .......
T Consensus 210 ~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~-----~~~~i~~ 284 (412)
T 2vd5_A 210 LKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAE-----TYGKIVH 284 (412)
T ss_dssp EECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHH-----HHHHHHT
T ss_pred eeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHH-----HHHHHHh
Confidence 1 24678999999999999999999997533211 1111100
Q ss_pred chhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCC---CCHHHHHHH
Q 045127 428 ENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKL---PSLVQIYNM 475 (508)
Q Consensus 428 ~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~R---Ps~~evl~~ 475 (508)
.. ..+............+.+++.+||. +|.+| |+++|+++.
T Consensus 285 ~~------~~~~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H 328 (412)
T 2vd5_A 285 YK------EHLSLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTH 328 (412)
T ss_dssp HH------HHCCCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred cc------cCcCCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence 00 0000000001124567788999999 99998 699999864
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-37 Score=299.99 Aligned_cols=224 Identities=13% Similarity=0.155 Sum_probs=175.3
Q ss_pred hhcCCCCC-ceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHH-hhcCCCCccceeeEEec----CC
Q 045127 236 ATNGFSKK-NLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLL-VQFQHKNLIRVLGWNNS----RR 308 (508)
Q Consensus 236 ~~~~~~~~-~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l-~~l~h~niv~~~~~~~~----~~ 308 (508)
..++|... +.||+|+||.||+|.. .+++.||+|++... ..+.+|+.++ +..+||||+++++++.. ..
T Consensus 15 ~~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 88 (299)
T 3m2w_A 15 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC------PKARREVELHWRASQCPHIVRIVDVYENLYAGRK 88 (299)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEE
T ss_pred cccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc------HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCc
Confidence 44667776 7899999999999997 56899999999532 3567888887 55689999999999876 66
Q ss_pred eeEEEEeecCCCCHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecC---CCceEEeeccCC
Q 045127 309 TRAIVTEWTNGGNVELWLSE---SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTD---NLEPLISRFKIE 382 (508)
Q Consensus 309 ~~~lv~e~~~~gsL~~~l~~---~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~---~~~~kl~Dfg~~ 382 (508)
..++||||+++|+|.+++.. ..+++..+..++.|++.||+|||++ ||+||||||+||+++. ++.+||+|||++
T Consensus 89 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a 167 (299)
T 3m2w_A 89 CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI-NIAHRDVKPENLLYTSKRPNAILKLTDFGFA 167 (299)
T ss_dssp EEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEESSSSTTCCEEECCCTTC
T ss_pred eEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHEEEecCCCCCcEEEeccccc
Confidence 78999999999999999983 3699999999999999999999999 9999999999999997 789999999987
Q ss_pred -----CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcc-hHHHHHHHHHHHH
Q 045127 383 -----YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTEN-MFDQAEQGLGLGL 456 (508)
Q Consensus 383 -----~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~l~~l~~ 456 (508)
..++.++|||||||++|||++|+.||....... ........ ........... .......+.+++.
T Consensus 168 ~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~------~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~li~ 238 (299)
T 3m2w_A 168 KETTGEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA------ISPGMKTR---IRMGQYEFPNPEWSEVSEEVKMLIR 238 (299)
T ss_dssp EECTTCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------------CCSCCS---SCTTCCSSCHHHHTTSCHHHHHHHH
T ss_pred cccccccCCchhhHHHHHHHHHHHHHCCCCCCCCcchh------hhHHHHHH---HhhccccCCchhcccCCHHHHHHHH
Confidence 456788999999999999999999997532211 00000000 00000000000 0112456788999
Q ss_pred hcCCCCCCCCCCHHHHHHH
Q 045127 457 MCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 457 ~Cl~~dP~~RPs~~evl~~ 475 (508)
+||+.||++|||+.|+++.
T Consensus 239 ~~l~~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 239 NLLKTEPTQRMTITEFMNH 257 (299)
T ss_dssp HHTCSSTTTSCCHHHHHTS
T ss_pred HHcccChhhCCCHHHHhcC
Confidence 9999999999999999974
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-36 Score=314.40 Aligned_cols=236 Identities=12% Similarity=0.093 Sum_probs=181.3
Q ss_pred hhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCC-CHHHHHHHHHHHHHHhhcCCCCccceeeEEecC------
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDV-SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSR------ 307 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------ 307 (508)
..++|+..+.||+|+||.||+|.. .+++.||||++.... .....+++.+|+.+++.++||||+++++++...
T Consensus 60 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 139 (464)
T 3ttj_A 60 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEF 139 (464)
T ss_dssp EETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTC
T ss_pred ecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccC
Confidence 457899999999999999999997 468999999996542 334567889999999999999999999999654
Q ss_pred CeeEEEEeecCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC----
Q 045127 308 RTRAIVTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY---- 383 (508)
Q Consensus 308 ~~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~---- 383 (508)
...|+||||+++ ++.+.+. ..+++..+..++.|++.||+|||++ ||+||||||+|||++.++.+||+|||++.
T Consensus 140 ~~~~lv~E~~~~-~l~~~~~-~~l~~~~~~~~~~qil~aL~~lH~~-~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 216 (464)
T 3ttj_A 140 QDVYLVMELMDA-NLCQVIQ-MELDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 216 (464)
T ss_dssp CEEEEEEECCSE-EHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTSCEEECCCCCC-----
T ss_pred CeEEEEEeCCCC-CHHHHHh-hcCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCChHhEEEeCCCCEEEEEEEeeeecCC
Confidence 356999999976 4666664 4589999999999999999999999 99999999999999999999999998742
Q ss_pred ----------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhc----------cchhh
Q 045127 384 ----------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHY----------PENLQ 431 (508)
Q Consensus 384 ----------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~----------~~~~~ 431 (508)
.++.++|||||||++|||++|+.||.+..... .+...+.... .....
T Consensus 217 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~-~~~~i~~~lg~p~~~~~~~~~~~~~ 295 (464)
T 3ttj_A 217 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID-QWNKVIEQLGTPCPEFMKKLQPTVR 295 (464)
T ss_dssp CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCSCCHHHHTTSCHHHH
T ss_pred CcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcCCCCHHHHHHcchhhh
Confidence 45678999999999999999999997543111 1111111100 00011
Q ss_pred hh---------------hhhccc--CCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 432 LV---------------VDERMM--LTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 432 ~~---------------~~~~l~--~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
.. +...+. ...........+.+++.+||+.||++|||++|+++.
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 296 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp HHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred hHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 11 111110 001111225678899999999999999999999874
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-36 Score=304.74 Aligned_cols=223 Identities=14% Similarity=0.169 Sum_probs=184.1
Q ss_pred hhcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCC--CHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEE
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDV--SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAI 312 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 312 (508)
..++|...+.||+|+||.||++... +++.||+|++.... .....+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 39 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 118 (335)
T 2owb_A 39 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV 118 (335)
T ss_dssp TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred cCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEE
Confidence 4467899999999999999999984 58899999986432 33457789999999999999999999999999999999
Q ss_pred EEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC--------
Q 045127 313 VTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY-------- 383 (508)
Q Consensus 313 v~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~-------- 383 (508)
||||+++++|.+++. ...+++.++..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||.+.
T Consensus 119 v~e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~ 197 (335)
T 2owb_A 119 VLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN-RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER 197 (335)
T ss_dssp EECCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEECTTCCEEECCCTTCEECCSTTCC
T ss_pred EEecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC-CCEecCCCchhEEEcCCCCEEEeeccCceecccCccc
Confidence 999999999999987 57799999999999999999999999 99999999999999999999999998752
Q ss_pred -------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcch
Q 045127 384 -------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENM 444 (508)
Q Consensus 384 -------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 444 (508)
.++.++||||||+++|||++|+.||....... .... +.........
T Consensus 198 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-----~~~~--------~~~~~~~~~~-- 262 (335)
T 2owb_A 198 KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE-----TYLR--------IKKNEYSIPK-- 262 (335)
T ss_dssp BCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH-----HHHH--------HHHTCCCCCT--
T ss_pred ccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHH-----HHHH--------HhcCCCCCCc--
Confidence 24568999999999999999999997432111 1110 0011110000
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 445 FDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 445 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
.....+.+++.+||+.||++|||++|+++.
T Consensus 263 -~~~~~~~~li~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 263 -HINPVAASLIQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp -TSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred -cCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 113456778999999999999999999974
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-37 Score=297.01 Aligned_cols=223 Identities=15% Similarity=0.211 Sum_probs=182.5
Q ss_pred hhcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCC--HHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEE
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVS--REIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAI 312 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 312 (508)
..++|+..+.||+|+||.||+|... +++.||+|++..... ....+.+.+|+.+++.++||||+++++++......++
T Consensus 9 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 88 (276)
T 2h6d_A 9 KIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFM 88 (276)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred eeccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEE
Confidence 3468899999999999999999985 789999999964321 1235678999999999999999999999999999999
Q ss_pred EEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCCC-------
Q 045127 313 VTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEYQ------- 384 (508)
Q Consensus 313 v~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~------- 384 (508)
||||+++++|.+++. ...+++..+..++.|++.||+|||++ |++||||||+||+++.++.+||+|||.+..
T Consensus 89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~ 167 (276)
T 2h6d_A 89 VMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRH-MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFL 167 (276)
T ss_dssp EEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHH-CSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC----
T ss_pred EEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC-CCccCCCChhhEEECCCCCEEEeecccccccCCCcce
Confidence 999999999999997 56789999999999999999999999 999999999999999999999999986421
Q ss_pred --------------------CCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcch
Q 045127 385 --------------------HRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENM 444 (508)
Q Consensus 385 --------------------~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 444 (508)
.+.++||||||+++|+|++|+.||...... .....+... ......
T Consensus 168 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~-----------~~~~~~-- 232 (276)
T 2h6d_A 168 RTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVP--TLFKKIRGG-----------VFYIPE-- 232 (276)
T ss_dssp ---------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHC-----------CCCCCT--
T ss_pred ecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHH--HHHHHhhcC-----------cccCch--
Confidence 135789999999999999999999753211 111111110 000000
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 445 FDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 445 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
.....+.+++.+||+.||++|||+.|+++.
T Consensus 233 -~~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 233 -YLNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp -TSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred -hcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 113456788999999999999999999974
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-37 Score=316.57 Aligned_cols=223 Identities=12% Similarity=0.100 Sum_probs=173.1
Q ss_pred hhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCC--CCHHHHHHHHHHH---HHHhhcCCCCcccee-------e
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGD--VSREIRDEFVEEC---KLLVQFQHKNLIRVL-------G 302 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~~E~---~~l~~l~h~niv~~~-------~ 302 (508)
..++|+..+.||+|+||.||+|.. .+|+.||||++... ......+.+.+|+ +.+++++||||++++ +
T Consensus 71 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~ 150 (377)
T 3byv_A 71 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD 150 (377)
T ss_dssp CCEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSE
T ss_pred CCceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhh
Confidence 346788899999999999999996 56999999999632 2233567899999 455566899999998 6
Q ss_pred EEecCC-----------------eeEEEEeecCCCCHHHHhcc-CCCC-------HHHHHHHHHHHHHHHHHHhhCCCcc
Q 045127 303 WNNSRR-----------------TRAIVTEWTNGGNVELWLSE-SAPS-------WKHRLKVLIGVVEAMCYLQEQWPEV 357 (508)
Q Consensus 303 ~~~~~~-----------------~~~lv~e~~~~gsL~~~l~~-~~l~-------~~~~~~i~~~i~~~L~~LH~~~~ii 357 (508)
++..++ ..++||||+ +|+|.+++.. ..++ +..+..|+.||+.||+|||++ ||+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~iv 228 (377)
T 3byv_A 151 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY-GLV 228 (377)
T ss_dssp EEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT-TEE
T ss_pred hhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC-Cee
Confidence 665543 278999999 6899999972 2233 588889999999999999999 999
Q ss_pred ccCCCCCCEEecCCCceEEeeccCCC----------------------------------CCCCcchhhHHHHHHHHHHh
Q 045127 358 DYDLRTGSVLLTDNLEPLISRFKIEY----------------------------------QHRSTKYVYKFGLFLLEMIT 403 (508)
Q Consensus 358 H~Dlkp~NIll~~~~~~kl~Dfg~~~----------------------------------~~~~~~Dv~SlGvil~ellt 403 (508)
||||||+|||++.++.+||+|||++. .++.++|||||||++|||++
T Consensus 229 HrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~g~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~ellt 308 (377)
T 3byv_A 229 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGARVVSSVSRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWC 308 (377)
T ss_dssp CSCCCGGGEEECTTCCEEECCGGGCEETTCEEECCCCTTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHH
T ss_pred cCCCCHHHEEEcCCCCEEEEechhheecCCcccCCCCcCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHH
Confidence 99999999999999999999999853 46788999999999999999
Q ss_pred CCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH--HHHHHH
Q 045127 404 NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYN--MITRAY 480 (508)
Q Consensus 404 g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~--~L~~i~ 480 (508)
|+.||........ ...+.. .. . .....+.+++.+||+.||++|||+.|+++ .+.++.
T Consensus 309 g~~Pf~~~~~~~~-------------~~~~~~-~~---~---~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~~ 367 (377)
T 3byv_A 309 ADLPITKDAALGG-------------SEWIFR-SC---K---NIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQLR 367 (377)
T ss_dssp SSCCC------CC-------------SGGGGS-SC---C---CCCHHHHHHHHHHTCSSGGGCCCHHHHHTSHHHHHHH
T ss_pred CCCCCcccccccc-------------hhhhhh-hc---c---CCCHHHHHHHHHHcCCCchhCCCHHHHhhChHHHHHH
Confidence 9999975332110 011111 00 0 11345778999999999999999999986 455544
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-36 Score=302.20 Aligned_cols=233 Identities=12% Similarity=0.148 Sum_probs=183.7
Q ss_pred HhhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcC-CCCccceeeEEe-------
Q 045127 235 AATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQ-HKNLIRVLGWNN------- 305 (508)
Q Consensus 235 ~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~------- 305 (508)
....+|+..+.||+|+||.||+|.+ .+++.||+|++... .....+.+.+|+.+++++. ||||+++++++.
T Consensus 25 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~ 103 (337)
T 3ll6_A 25 LGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSN-EEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESD 103 (337)
T ss_dssp ETTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEES-SHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTST
T ss_pred ccCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCC-chHHHHHHHHHHHHHHHhccCCChhhccccccccccccc
Confidence 3445789999999999999999997 46899999998544 3345678899999999996 999999999984
Q ss_pred -cCCeeEEEEeecCCCCHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHhhCCC--ccccCCCCCCEEecCCCceEEee
Q 045127 306 -SRRTRAIVTEWTNGGNVELWLS----ESAPSWKHRLKVLIGVVEAMCYLQEQWP--EVDYDLRTGSVLLTDNLEPLISR 378 (508)
Q Consensus 306 -~~~~~~lv~e~~~~gsL~~~l~----~~~l~~~~~~~i~~~i~~~L~~LH~~~~--iiH~Dlkp~NIll~~~~~~kl~D 378 (508)
.....++||||+. |+|.+++. ...+++.++..++.|++.||+|||++ + |+||||||+||+++.++.+||+|
T Consensus 104 ~~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~-~~~ivH~Dikp~NIl~~~~~~~kl~D 181 (337)
T 3ll6_A 104 TGQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCD 181 (337)
T ss_dssp TSSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS-SSCCBCCCCCGGGCEECTTSCEEBCC
T ss_pred cCCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC-CCCEEEccCCcccEEECCCCCEEEec
Confidence 3345799999996 69988886 46799999999999999999999999 9 99999999999999999999999
Q ss_pred ccCCCC------------------------------------------CCCcchhhHHHHHHHHHHhCCCCCcccccCcc
Q 045127 379 FKIEYQ------------------------------------------HRSTKYVYKFGLFLLEMITNRRPLEEFERGEA 416 (508)
Q Consensus 379 fg~~~~------------------------------------------~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~ 416 (508)
||.+.. ++.++|||||||++|||++|+.||.......
T Consensus 182 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~- 260 (337)
T 3ll6_A 182 FGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLR- 260 (337)
T ss_dssp CTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC--------
T ss_pred CccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHH-
Confidence 987531 2347899999999999999999997432111
Q ss_pred cHHHHHHHhccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhCCCCCC
Q 045127 417 GFIEYIRMHYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSCPILTS 488 (508)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~ 488 (508)
........ ... ......+.+++.+||+.||.+|||+.|+++.|+++.........
T Consensus 261 ----~~~~~~~~--------~~~-----~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~~~~~~ 315 (337)
T 3ll6_A 261 ----IVNGKYSI--------PPH-----DTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARNVNPK 315 (337)
T ss_dssp ---------CCC--------CTT-----CCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHTTCCTT
T ss_pred ----hhcCcccC--------Ccc-----cccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccCCCCC
Confidence 11111100 000 00122356789999999999999999999999999887655443
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-37 Score=316.77 Aligned_cols=235 Identities=14% Similarity=0.068 Sum_probs=186.3
Q ss_pred CHHHHHHhhcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCH--HHHHHHHHHHHHHhhcCCCCccceeeEEe
Q 045127 229 TTWMLKAATNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSR--EIRDEFVEECKLLVQFQHKNLIRVLGWNN 305 (508)
Q Consensus 229 ~~~~l~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 305 (508)
.+.++....++|+..+.||+|+||.||+|+.. +++.||+|+++..... .....+.+|..++..++||||+++++++.
T Consensus 65 ~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 144 (437)
T 4aw2_A 65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQ 144 (437)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe
Confidence 45566677899999999999999999999985 5789999999632111 11234889999999999999999999999
Q ss_pred cCCeeEEEEeecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC
Q 045127 306 SRRTRAIVTEWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY 383 (508)
Q Consensus 306 ~~~~~~lv~e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~ 383 (508)
+++..|+||||+++|+|.+++. ...+++..+..++.||+.||+|||+. ||+||||||+|||++.++.+||+|||++.
T Consensus 145 ~~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~-giiHrDLKp~NILl~~~g~vkL~DFGla~ 223 (437)
T 4aw2_A 145 DDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQL-HYVHRDIKPDNILMDMNGHIRLADFGSCL 223 (437)
T ss_dssp CSSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred eCCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhC-CeEecccCHHHeeEcCCCCEEEcchhhhh
Confidence 9999999999999999999997 46899999999999999999999999 99999999999999999999999998641
Q ss_pred ---------------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchh
Q 045127 384 ---------------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENL 430 (508)
Q Consensus 384 ---------------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~ 430 (508)
.++.++|||||||++|||++|+.||......+ .........
T Consensus 224 ~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~-----~~~~i~~~~- 297 (437)
T 4aw2_A 224 KLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVE-----TYGKIMNHK- 297 (437)
T ss_dssp ECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHH-----HHHHHHTHH-
T ss_pred hcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhH-----HHHhhhhcc-
Confidence 24568999999999999999999997532211 111110000
Q ss_pred hhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCC--CCCHHHHHHH
Q 045127 431 QLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGK--LPSLVQIYNM 475 (508)
Q Consensus 431 ~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~--RPs~~evl~~ 475 (508)
....+... .......+.+++.+|+..+|++ ||+++|+++.
T Consensus 298 ---~~~~~p~~--~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 298 ---ERFQFPTQ--VTDVSENAKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp ---HHCCCCSS--CCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred ---ccccCCcc--cccCCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence 00001000 0012345677888999888888 9999999874
|
| >4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-36 Score=327.05 Aligned_cols=222 Identities=19% Similarity=0.291 Sum_probs=181.9
Q ss_pred ceeeecCCeEEEEEEEC---CCCEEEEEEecCCCC-HHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEeecCC
Q 045127 244 NLVGKNEGAAIYKGILR---DGTRVKIEIYKGDVS-REIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWTNG 319 (508)
Q Consensus 244 ~~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 319 (508)
+.||+|+||.||+|.+. .++.||||+++.... ....+++.+|++++++++||||+++++++.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 47999999999999763 467899999975432 2346789999999999999999999999975 457899999999
Q ss_pred CCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC---------------
Q 045127 320 GNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY--------------- 383 (508)
Q Consensus 320 gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~--------------- 383 (508)
|+|.+++. ...+++..+..|+.||+.||+|||++ ||+||||||+|||++.++.+||+|||++.
T Consensus 454 g~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~-~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~ 532 (635)
T 4fl3_A 454 GPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES-NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 532 (635)
T ss_dssp EEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-----------
T ss_pred CCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHC-CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccccCC
Confidence 99999998 56799999999999999999999999 99999999999999999999999998631
Q ss_pred ---------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHH
Q 045127 384 ---------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQ 447 (508)
Q Consensus 384 ---------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 447 (508)
.++.++|||||||++|||++ |+.||...... .+...+..... .... ...
T Consensus 533 ~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~--~~~~~i~~~~~----------~~~p---~~~ 597 (635)
T 4fl3_A 533 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS--EVTAMLEKGER----------MGCP---AGC 597 (635)
T ss_dssp --CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HHHHHHHTTCC----------CCCC---TTC
T ss_pred CCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCCC----------CCCC---CCC
Confidence 35568999999999999998 99999754322 12222211110 0000 122
Q ss_pred HHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhh
Q 045127 448 AEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKS 482 (508)
Q Consensus 448 ~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 482 (508)
...+.+++..||+.||++|||+.+|++.|+++...
T Consensus 598 ~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~ 632 (635)
T 4fl3_A 598 PREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYD 632 (635)
T ss_dssp CHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHH
Confidence 45678899999999999999999999999988654
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-37 Score=306.19 Aligned_cols=225 Identities=18% Similarity=0.210 Sum_probs=176.8
Q ss_pred HhhcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhc-CCCCccceeeEEecCCeeEE
Q 045127 235 AATNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSREIRDEFVEECKLLVQF-QHKNLIRVLGWNNSRRTRAI 312 (508)
Q Consensus 235 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~l 312 (508)
...++|+..+.||+|+||.||+|... +++.||+|++..... ...+|++++.++ +||||+++++++.++...|+
T Consensus 19 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~-----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~l 93 (342)
T 2qr7_A 19 QFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR-----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYV 93 (342)
T ss_dssp CHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC-----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEE
T ss_pred CccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC-----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEE
Confidence 34578999999999999999999984 689999999965432 235688888888 79999999999999999999
Q ss_pred EEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCC----CceEEeeccCCCC---
Q 045127 313 VTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDN----LEPLISRFKIEYQ--- 384 (508)
Q Consensus 313 v~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~----~~~kl~Dfg~~~~--- 384 (508)
||||+++|+|.+++. ...+++..+..++.||+.||+|||++ ||+||||||+||++.++ +.+||+|||++..
T Consensus 94 v~E~~~gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~-givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~ 172 (342)
T 2qr7_A 94 VTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQ-GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRA 172 (342)
T ss_dssp EECCCCSCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBC
T ss_pred EEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC-CcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcC
Confidence 999999999999887 56789999999999999999999999 99999999999998533 3599999997531
Q ss_pred ------------------------CCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccC
Q 045127 385 ------------------------HRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMML 440 (508)
Q Consensus 385 ------------------------~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 440 (508)
++.++|||||||++|||++|+.||....... ........ .......
T Consensus 173 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~--~~~~~~~i--------~~~~~~~ 242 (342)
T 2qr7_A 173 ENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDT--PEEILARI--------GSGKFSL 242 (342)
T ss_dssp TTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSC--HHHHHHHH--------HHCCCCC
T ss_pred CCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCC--HHHHHHHH--------ccCCccc
Confidence 2346899999999999999999997532211 11111111 0111100
Q ss_pred Cc-chHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 441 TE-NMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 441 ~~-~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
.. ........+.+++.+||+.||++|||+.|+++.
T Consensus 243 ~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~h 278 (342)
T 2qr7_A 243 SGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRH 278 (342)
T ss_dssp CSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred CccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 00 001124567789999999999999999999864
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-36 Score=318.56 Aligned_cols=226 Identities=15% Similarity=0.210 Sum_probs=180.9
Q ss_pred hhcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCH------------HHHHHHHHHHHHHhhcCCCCccceee
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSR------------EIRDEFVEECKLLVQFQHKNLIRVLG 302 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~------------~~~~~~~~E~~~l~~l~h~niv~~~~ 302 (508)
..++|+..+.||+|+||.||+|... +++.||+|++...... ...+.+.+|+.++++++||||+++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 4678999999999999999999974 5889999999643321 23567899999999999999999999
Q ss_pred EEecCCeeEEEEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCC---ceEEee
Q 045127 303 WNNSRRTRAIVTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNL---EPLISR 378 (508)
Q Consensus 303 ~~~~~~~~~lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~---~~kl~D 378 (508)
++.++...++||||+++|+|.+++. ...+++..+..++.||+.||+|||++ ||+||||||+||+++.++ .+||+|
T Consensus 114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~Dlkp~Nil~~~~~~~~~~kl~D 192 (504)
T 3q5i_A 114 VFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKH-NIVHRDIKPENILLENKNSLLNIKIVD 192 (504)
T ss_dssp EEECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEESSTTCCSSEEECC
T ss_pred EEEcCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEeCCCcHHHEEEecCCCCccEEEEE
Confidence 9999999999999999999998887 67899999999999999999999999 999999999999998765 699999
Q ss_pred ccCCC-------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhh
Q 045127 379 FKIEY-------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLV 433 (508)
Q Consensus 379 fg~~~-------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (508)
||++. .++.++||||+||++|+|++|+.||...... .+...+...
T Consensus 193 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~~~i~~~-------- 262 (504)
T 3q5i_A 193 FGLSSFFSKDYKLRDRLGTAYYIAPEVLKKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQ--DIIKKVEKG-------- 262 (504)
T ss_dssp CTTCEECCTTSCBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHC--------
T ss_pred CCCCEEcCCCCccccccCCcCCCCHHHhccCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHcC--------
Confidence 98752 3467899999999999999999999753321 111111111
Q ss_pred hhhcccCCcc-hHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 434 VDERMMLTEN-MFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 434 ~~~~l~~~~~-~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
....... .......+.+++.+||+.||.+|||++|+++.
T Consensus 263 ---~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 263 ---KYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp ---CCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ---CCCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 0000000 00123567789999999999999999999874
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-36 Score=305.05 Aligned_cols=244 Identities=16% Similarity=0.145 Sum_probs=187.3
Q ss_pred CHHHHHHhhcCCCCCceeeecCCeEEEEEEECCCCEEEEEEecCCCC----------HHHHHHHHHHHHHHhhcCCCCcc
Q 045127 229 TTWMLKAATNGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVS----------REIRDEFVEECKLLVQFQHKNLI 298 (508)
Q Consensus 229 ~~~~l~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~----------~~~~~~~~~E~~~l~~l~h~niv 298 (508)
...++....++|+..+.||+|+||.||+|...+|+.||||++..... ....+.+.+|++++++++||||+
T Consensus 13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 92 (362)
T 3pg1_A 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL 92 (362)
T ss_dssp HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence 35678888999999999999999999999988899999999854322 22347899999999999999999
Q ss_pred ceeeEEec-----CCeeEEEEeecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCC
Q 045127 299 RVLGWNNS-----RRTRAIVTEWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDN 371 (508)
Q Consensus 299 ~~~~~~~~-----~~~~~lv~e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~ 371 (508)
++++++.. ....++||||++ |+|.+++. ...+++..+..++.|++.||+|||++ ||+||||||+||+++.+
T Consensus 93 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dlkp~NIl~~~~ 170 (362)
T 3pg1_A 93 GLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEA-GVVHRDLHPGNILLADN 170 (362)
T ss_dssp CCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTT
T ss_pred ceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC-cCEecCCChHHEEEcCC
Confidence 99999853 346799999998 58888876 34689999999999999999999999 99999999999999999
Q ss_pred CceEEeeccCC---------------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHH
Q 045127 372 LEPLISRFKIE---------------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRM 424 (508)
Q Consensus 372 ~~~kl~Dfg~~---------------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~ 424 (508)
+.+||+|||.+ ..++.++|||||||++|+|++|+.||....... .+......
T Consensus 171 ~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~i~~~ 249 (362)
T 3pg1_A 171 NDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYN-QLNKIVEV 249 (362)
T ss_dssp CCEEECCTTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHH
T ss_pred CCEEEEecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHH
Confidence 99999999874 235678999999999999999999997543111 11111111
Q ss_pred hccch-----------hhhhhhhcccCC-cch-----HHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 425 HYPEN-----------LQLVVDERMMLT-ENM-----FDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 425 ~~~~~-----------~~~~~~~~l~~~-~~~-----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
..... ..+.+....... ... ......+.+++.+||+.||++|||+.|+++.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 250 VGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp HCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred cCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 11110 111111111000 000 0113557889999999999999999999874
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-36 Score=303.53 Aligned_cols=238 Identities=15% Similarity=0.138 Sum_probs=186.0
Q ss_pred HhhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecC-----C
Q 045127 235 AATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSR-----R 308 (508)
Q Consensus 235 ~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-----~ 308 (508)
...++|+..+.||+|+||.||+|.. .+++.||||++.........+.+.+|++++++++||||+++++++... .
T Consensus 24 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 103 (364)
T 3qyz_A 24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMK 103 (364)
T ss_dssp CCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCC
T ss_pred cccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccc
Confidence 4457899999999999999999997 468899999997655565678899999999999999999999998754 3
Q ss_pred eeEEEEeecCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-----
Q 045127 309 TRAIVTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY----- 383 (508)
Q Consensus 309 ~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~----- 383 (508)
..++||||++ |+|.+++....+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||.+.
T Consensus 104 ~~~iv~e~~~-~~L~~~l~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~ 181 (364)
T 3qyz_A 104 DVYIVQDLME-TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 181 (364)
T ss_dssp CEEEEEECCS-EEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTCCEEECCCTTCEECCGG
T ss_pred eEEEEEcccC-cCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCChHhEEECCCCCEEEEeCcceEecCCC
Confidence 6799999997 5999999988899999999999999999999999 99999999999999999999999998641
Q ss_pred --------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccch---hh---
Q 045127 384 --------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPEN---LQ--- 431 (508)
Q Consensus 384 --------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~---~~--- 431 (508)
.++.++|||||||++|||++|+.||....... .+........... ..
T Consensus 182 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~ 260 (364)
T 3qyz_A 182 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD-QLNHILGILGSPSQEDLNCII 260 (364)
T ss_dssp GCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGG-HHHHHHHHHCSCCHHHHHTCC
T ss_pred CCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHH-HHHHHHHHhCCCCHHHHHHhh
Confidence 24678899999999999999999997543222 1111111110000 00
Q ss_pred -----hhhhhcccCCcch-----HHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 432 -----LVVDERMMLTENM-----FDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 432 -----~~~~~~l~~~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
............. ......+.+++.+||+.||++|||+.|+++.
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 261 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp CHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0000000000000 0113567889999999999999999999874
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-36 Score=297.31 Aligned_cols=227 Identities=15% Similarity=0.200 Sum_probs=183.4
Q ss_pred HhhcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCC----C----HHHHHHHHHHHHHHhhcC-CCCccceeeEE
Q 045127 235 AATNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDV----S----REIRDEFVEECKLLVQFQ-HKNLIRVLGWN 304 (508)
Q Consensus 235 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~----~----~~~~~~~~~E~~~l~~l~-h~niv~~~~~~ 304 (508)
...++|+..+.||+|+||.||+|... +++.||||++.... . ....+.+.+|+++++++. ||||+++++++
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 93 (298)
T 1phk_A 14 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY 93 (298)
T ss_dssp -CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred chhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeee
Confidence 45578999999999999999999984 68999999996442 1 123567889999999996 99999999999
Q ss_pred ecCCeeEEEEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC
Q 045127 305 NSRRTRAIVTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY 383 (508)
Q Consensus 305 ~~~~~~~lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~ 383 (508)
......++||||+++++|.+++. ...+++..+..++.|++.||+|||++ |++||||||+||+++.++.+||+|||.+.
T Consensus 94 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~kl~dfg~~~ 172 (298)
T 1phk_A 94 ETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKL-NIVHRDLKPENILLDDDMNIKLTDFGFSC 172 (298)
T ss_dssp ECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred ccCCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCcceEEEcCCCcEEEecccchh
Confidence 99999999999999999999998 56899999999999999999999999 99999999999999999999999998642
Q ss_pred --------------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhh
Q 045127 384 --------------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQ 431 (508)
Q Consensus 384 --------------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~ 431 (508)
.++.++||||||+++|||++|+.||...... .....+......
T Consensus 173 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~~~--- 247 (298)
T 1phk_A 173 QLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQM--LMLRMIMSGNYQ--- 247 (298)
T ss_dssp ECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHTCCC---
T ss_pred hcCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHH--HHHHHHhcCCcc---
Confidence 2456889999999999999999999743211 111111110000
Q ss_pred hhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 432 LVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 432 ~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
...+. .......+.+++.+||+.||.+|||+.|+++
T Consensus 248 -~~~~~------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 248 -FGSPE------WDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp -CCTTT------GGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred -cCccc------ccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 00000 0112456778999999999999999999986
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-36 Score=303.10 Aligned_cols=231 Identities=17% Similarity=0.231 Sum_probs=184.8
Q ss_pred CCCHHHHHHhhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhc-CCCCccceeeEE
Q 045127 227 KFTTWMLKAATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQF-QHKNLIRVLGWN 304 (508)
Q Consensus 227 ~~~~~~l~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~ 304 (508)
.++..++....++|+..+.||+|+||.||+|.+ .+++.||+|++..... ....+.+|+.+++++ +||||+++++++
T Consensus 13 ~~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 90 (326)
T 2x7f_A 13 EIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD--EEEEIKQEINMLKKYSHHRNIATYYGAF 90 (326)
T ss_dssp ---CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS--TTHHHHHHHHHHHHHCCSTTBCCEEEEE
T ss_pred hccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcc--cHHHHHHHHHHHHhccCCCCeeeeeeEE
Confidence 344455666788999999999999999999998 5789999999964432 346788999999999 799999999998
Q ss_pred ec------CCeeEEEEeecCCCCHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceE
Q 045127 305 NS------RRTRAIVTEWTNGGNVELWLS---ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPL 375 (508)
Q Consensus 305 ~~------~~~~~lv~e~~~~gsL~~~l~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~k 375 (508)
.. ....++||||+++|+|.+++. ...+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+|
T Consensus 91 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~dlkp~NIl~~~~~~~k 169 (326)
T 2x7f_A 91 IKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH-KVIHRDIKGQNVLLTENAEVK 169 (326)
T ss_dssp EECC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCSGGGEEECTTCCEE
T ss_pred eeccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCcHHHEEEcCCCCEE
Confidence 76 467899999999999999997 35789999999999999999999999 999999999999999999999
Q ss_pred EeeccCCC--------------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHH
Q 045127 376 ISRFKIEY--------------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIR 423 (508)
Q Consensus 376 l~Dfg~~~--------------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~ 423 (508)
|+|||.+. .++.++|||||||++|||++|+.||....... ....+.
T Consensus 170 l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~~~ 247 (326)
T 2x7f_A 170 LVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMR--ALFLIP 247 (326)
T ss_dssp ECCCTTTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH--HHHHHH
T ss_pred EeeCcCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHH--HHHHhh
Confidence 99998642 24567999999999999999999997533211 000010
Q ss_pred HhccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 424 MHYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 424 ~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
.. ..+..... .....+.+++.+||+.||.+|||+.|+++
T Consensus 248 ~~--------~~~~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 248 RN--------PAPRLKSK----KWSKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp HS--------CCCCCSCS----CSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred cC--------ccccCCcc----ccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 00 00111000 11346778899999999999999999987
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-37 Score=320.32 Aligned_cols=227 Identities=13% Similarity=0.162 Sum_probs=184.6
Q ss_pred hhcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCC--HHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEE
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVS--REIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAI 312 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 312 (508)
..++|+..+.||+|+||.||+|... +++.||||++..... ......+.+|+.++++++||||+++++++.+....++
T Consensus 24 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 103 (484)
T 3nyv_A 24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYL 103 (484)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 3467899999999999999999984 789999999864321 2346789999999999999999999999999999999
Q ss_pred EEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEe---cCCCceEEeeccCC------
Q 045127 313 VTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLL---TDNLEPLISRFKIE------ 382 (508)
Q Consensus 313 v~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll---~~~~~~kl~Dfg~~------ 382 (508)
||||+.+|+|.+++. ...+++..+..++.|++.||+|||++ ||+||||||+||++ +.++.+||+|||++
T Consensus 104 v~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~ 182 (484)
T 3nyv_A 104 VGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN-KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS 182 (484)
T ss_dssp EECCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCC
T ss_pred EEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcccc
Confidence 999999999998886 67899999999999999999999999 99999999999999 46789999999863
Q ss_pred -------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcc
Q 045127 383 -------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTEN 443 (508)
Q Consensus 383 -------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 443 (508)
+.++.++||||+||++|+|++|+.||...... .+...+...... . ..+.
T Consensus 183 ~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~~~i~~~~~~---------~-~~~~ 250 (484)
T 3nyv_A 183 KKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEY--DILKKVEKGKYT---------F-ELPQ 250 (484)
T ss_dssp CSHHHHTTGGGTCCHHHHHTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHCCCC---------C-CSGG
T ss_pred cccccCCCCccccCceeecCCCCCcceeHHHHHHHHHHHHCCCCCCCCCHH--HHHHHHHcCCCC---------C-CCcc
Confidence 24577899999999999999999999753221 111111111000 0 0000
Q ss_pred hHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 444 MFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 444 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
.......+.+++.+||+.||.+|||+.|+++.
T Consensus 251 ~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 282 (484)
T 3nyv_A 251 WKKVSESAKDLIRKMLTYVPSMRISARDALDH 282 (484)
T ss_dssp GGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred cccCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence 01124567789999999999999999999974
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-36 Score=299.07 Aligned_cols=223 Identities=15% Similarity=0.209 Sum_probs=177.4
Q ss_pred HhhcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEE
Q 045127 235 AATNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIV 313 (508)
Q Consensus 235 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 313 (508)
...++|+..+.||+|+||.||+|... +|+.||+|.+.... ..+.+.+|+.++++++||||+++++++......++|
T Consensus 26 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 102 (314)
T 3com_A 26 QPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES---DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIV 102 (314)
T ss_dssp ----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS---CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred cchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH---HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEE
Confidence 34567999999999999999999985 58999999997543 246788999999999999999999999999999999
Q ss_pred EeecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC--------
Q 045127 314 TEWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY-------- 383 (508)
Q Consensus 314 ~e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~-------- 383 (508)
|||+++++|.+++. ...+++..+..++.|++.||.|||+. |++||||||+||+++.++.+||+|||.+.
T Consensus 103 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 181 (314)
T 3com_A 103 MEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFM-RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAK 181 (314)
T ss_dssp EECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBSC
T ss_pred eecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcCCCcCHHHEEECCCCCEEEeecccchhhhhhccc
Confidence 99999999999987 67899999999999999999999999 99999999999999999999999998741
Q ss_pred -------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcch
Q 045127 384 -------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENM 444 (508)
Q Consensus 384 -------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 444 (508)
.++.++||||||+++|+|++|+.||....... ......... .+.+...
T Consensus 182 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~~~--------~~~~~~~--- 248 (314)
T 3com_A 182 RNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMR--AIFMIPTNP--------PPTFRKP--- 248 (314)
T ss_dssp BCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH--HHHHHHHSC--------CCCCSSG---
T ss_pred cCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHH--HHHHHhcCC--------CcccCCc---
Confidence 24678999999999999999999997533211 000011110 0111000
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 445 FDQAEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 445 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
......+.+++.+||+.||.+|||+.++++
T Consensus 249 ~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 249 ELWSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp GGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred ccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 112346778999999999999999999986
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-36 Score=299.39 Aligned_cols=226 Identities=16% Similarity=0.177 Sum_probs=180.9
Q ss_pred hhcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEE
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVT 314 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 314 (508)
..++|...+.||+|+||.||+|... +|+.||+|++..... .....+.+|+.++++++||||+++++++......++||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (304)
T 2jam_A 7 IRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPA-FRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVM 85 (304)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC-------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccc-cchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEE
Confidence 3467889999999999999999974 789999999975432 23467889999999999999999999999999999999
Q ss_pred eecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEe---cCCCceEEeeccCCC-------
Q 045127 315 EWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLL---TDNLEPLISRFKIEY------- 383 (508)
Q Consensus 315 e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll---~~~~~~kl~Dfg~~~------- 383 (508)
||+++++|.+++. ...+++..+..++.|++.||+|||++ ||+||||||+||++ +.++.+||+|||.+.
T Consensus 86 e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~ 164 (304)
T 2jam_A 86 QLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHEN-GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIM 164 (304)
T ss_dssp CCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBTT
T ss_pred EcCCCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCcc
Confidence 9999999999887 66789999999999999999999999 99999999999999 788999999998743
Q ss_pred ------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchH
Q 045127 384 ------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMF 445 (508)
Q Consensus 384 ------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 445 (508)
.++.++||||||+++|||++|+.||...... .+...+...... ...+. ..
T Consensus 165 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~i~~~~~~----~~~~~------~~ 232 (304)
T 2jam_A 165 STACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETES--KLFEKIKEGYYE----FESPF------WD 232 (304)
T ss_dssp HHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHHHHHCCCC----CCTTT------TT
T ss_pred ccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH--HHHHHHHcCCCC----CCccc------cc
Confidence 2456799999999999999999999753211 111111111100 00000 01
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 446 DQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 446 ~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
.....+.+++.+||+.||++|||+.|+++.
T Consensus 233 ~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (304)
T 2jam_A 233 DISESAKDFICHLLEKDPNERYTCEKALSH 262 (304)
T ss_dssp TSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred cCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 123567789999999999999999999874
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-37 Score=309.71 Aligned_cols=218 Identities=15% Similarity=0.144 Sum_probs=169.6
Q ss_pred hhcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCC--HHHHHHHHHHHHH-HhhcCCCCccceeeEEecCCeeE
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVS--REIRDEFVEECKL-LVQFQHKNLIRVLGWNNSRRTRA 311 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~-l~~l~h~niv~~~~~~~~~~~~~ 311 (508)
..++|+..+.||+|+||.||+|+.. +++.||+|+++.... ......+.+|..+ ++.++||||+++++++.+.+..|
T Consensus 36 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~ 115 (373)
T 2r5t_A 36 KPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLY 115 (373)
T ss_dssp CGGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEE
T ss_pred ChhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEE
Confidence 3467999999999999999999984 588999999964432 2234566777776 56789999999999999999999
Q ss_pred EEEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-------
Q 045127 312 IVTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------- 383 (508)
Q Consensus 312 lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------- 383 (508)
+||||+++|+|.+++. ...+++..+..++.||+.||+|||++ ||+||||||+|||++.++.+||+|||++.
T Consensus 116 lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~-givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~~ 194 (373)
T 2r5t_A 116 FVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSL-NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNS 194 (373)
T ss_dssp EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCCC
T ss_pred EEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CceecCCCHHHEEECCCCCEEEeeCccccccccCCC
Confidence 9999999999999988 56789999999999999999999999 99999999999999999999999998742
Q ss_pred --------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcc
Q 045127 384 --------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTEN 443 (508)
Q Consensus 384 --------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 443 (508)
.++.++|||||||++|||++|+.||...... .... .++...+.....
T Consensus 195 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~-----~~~~--------~i~~~~~~~~~~ 261 (373)
T 2r5t_A 195 TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA-----EMYD--------NILNKPLQLKPN 261 (373)
T ss_dssp CCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHH-----HHHH--------HHHHSCCCCCSS
T ss_pred ccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHH-----HHHH--------HHHhcccCCCCC
Confidence 2456899999999999999999999753211 1111 111111111111
Q ss_pred hHHHHHHHHHHHHhcCCCCCCCCCCHH
Q 045127 444 MFDQAEQGLGLGLMCTDQPTGKLPSLV 470 (508)
Q Consensus 444 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~ 470 (508)
....+.+++.+||+.||.+||++.
T Consensus 262 ---~~~~~~~li~~lL~~dp~~R~~~~ 285 (373)
T 2r5t_A 262 ---ITNSARHLLEGLLQKDRTKRLGAK 285 (373)
T ss_dssp ---SCHHHHHHHHHHTCSSGGGSTTTT
T ss_pred ---CCHHHHHHHHHHcccCHHhCCCCC
Confidence 134567888999999999999974
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-38 Score=309.69 Aligned_cols=237 Identities=16% Similarity=0.223 Sum_probs=183.0
Q ss_pred HHHHhhcCCCCCceeeecCCeEEEEEEECCCCEEEEEEecCCCC-HHHHHHHHHHHHHHhhcCCCCccceeeEEecCCee
Q 045127 232 MLKAATNGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVS-REIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTR 310 (508)
Q Consensus 232 ~l~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 310 (508)
+.....++|+..+.||+|+||.||+|.+.+ .+|+|+++.... ....+.+.+|+.++++++||||+++++++......
T Consensus 27 ~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 104 (319)
T 2y4i_B 27 EWDIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHL 104 (319)
T ss_dssp GSSSCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCE
T ss_pred cccCCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCce
Confidence 334456789999999999999999999853 599999864322 22345678899999999999999999999999999
Q ss_pred EEEEeecCCCCHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-----
Q 045127 311 AIVTEWTNGGNVELWLSE--SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY----- 383 (508)
Q Consensus 311 ~lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~----- 383 (508)
++||||+++++|.+++.. ..+++..+..++.|++.||+|||++ |++||||||+||+++ ++.+||+|||++.
T Consensus 105 ~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~ 182 (319)
T 2y4i_B 105 AIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAK-GILHKDLKSKNVFYD-NGKVVITDFGLFSISGVL 182 (319)
T ss_dssp EEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHT-TCCCCCCCSTTEEEC---CCEECCCSCCC-----
T ss_pred EEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC-CccccCCChhhEEEe-CCCEEEeecCCccccccc
Confidence 999999999999999983 3689999999999999999999999 999999999999998 6899999999621
Q ss_pred ------------------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhcc
Q 045127 384 ------------------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYP 427 (508)
Q Consensus 384 ------------------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~ 427 (508)
.++.++||||||+++|||++|+.||....... ....+...
T Consensus 183 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~--~~~~~~~~-- 258 (319)
T 2y4i_B 183 QAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEA--IIWQMGTG-- 258 (319)
T ss_dssp -----CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHH--HHHHHHTT--
T ss_pred cccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHhccC--
Confidence 13567899999999999999999997533211 11111111
Q ss_pred chhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhCCCC
Q 045127 428 ENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSCPIL 486 (508)
Q Consensus 428 ~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~ 486 (508)
..+..... .....+.+++.+||+.||++|||+.++++.|+++.+.....
T Consensus 259 ------~~~~~~~~----~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~~~~ 307 (319)
T 2y4i_B 259 ------MKPNLSQI----GMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNRRL 307 (319)
T ss_dssp ------CCCCCCCS----SCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC-------
T ss_pred ------CCCCCCcC----CCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhhccC
Confidence 11111100 11234678899999999999999999999999998775443
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-36 Score=297.65 Aligned_cols=237 Identities=14% Similarity=0.151 Sum_probs=174.7
Q ss_pred hhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCC----HHHHHHHHHHHHHHhhc---CCCCccceeeEEecC
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVS----REIRDEFVEECKLLVQF---QHKNLIRVLGWNNSR 307 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l---~h~niv~~~~~~~~~ 307 (508)
..++|+..+.||+|+||.||+|.. .+++.||+|++..... ......+.+|+.+++++ +||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 467899999999999999999997 5689999999863221 11134566777777666 599999999999865
Q ss_pred C-----eeEEEEeecCCCCHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeec
Q 045127 308 R-----TRAIVTEWTNGGNVELWLSE---SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRF 379 (508)
Q Consensus 308 ~-----~~~lv~e~~~~gsL~~~l~~---~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Df 379 (508)
. ..++||||+. |+|.+++.. ..+++.++..++.|++.||+|||++ ||+||||||+||+++.++.+||+||
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~ivH~Dlkp~Nil~~~~~~~kl~Df 164 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHAN-CIVHRDLKPENILVTSGGTVKLADF 164 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCTTTEEECTTSCEEECSC
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEEcCCCCEEEeeC
Confidence 4 4799999997 599999883 2389999999999999999999999 9999999999999999999999999
Q ss_pred cCCC--------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccc--h-h
Q 045127 380 KIEY--------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPE--N-L 430 (508)
Q Consensus 380 g~~~--------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~--~-~ 430 (508)
|.+. .++.++|||||||++|||++|+.||....... .+.......... . .
T Consensus 165 g~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~ 243 (308)
T 3g33_A 165 GLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD-QLGKIFDLIGLPPEDDW 243 (308)
T ss_dssp SCTTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHH-HHHHHHHHHCCCCTTTS
T ss_pred ccccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCChhhc
Confidence 8752 34678999999999999999999997543221 111111111000 0 0
Q ss_pred hhh---hhhccc-CCcc-----hHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 431 QLV---VDERMM-LTEN-----MFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 431 ~~~---~~~~l~-~~~~-----~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
... ....+. .... .......+.+++.+||+.||++|||+.|+++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 297 (308)
T 3g33_A 244 PRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297 (308)
T ss_dssp CSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence 000 000000 0000 00124567789999999999999999999863
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-36 Score=298.06 Aligned_cols=234 Identities=12% Similarity=0.149 Sum_probs=176.6
Q ss_pred hcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEe----------
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNN---------- 305 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~---------- 305 (508)
.++|+..+.||+|+||.||+|... +++.||+|++... .....+.+.+|++++++++||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 88 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLT-DPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDV 88 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECC-SHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC--
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecC-ChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccc
Confidence 467899999999999999999985 5899999998644 3446778999999999999999999999874
Q ss_pred ----cCCeeEEEEeecCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEec-CCCceEEeecc
Q 045127 306 ----SRRTRAIVTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLT-DNLEPLISRFK 380 (508)
Q Consensus 306 ----~~~~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~-~~~~~kl~Dfg 380 (508)
.....++||||++ |+|.+++....+++..+..++.|++.||+|||++ ||+||||||+||+++ +++.+||+|||
T Consensus 89 ~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~~kl~Dfg 166 (320)
T 2i6l_A 89 GSLTELNSVYIVQEYME-TDLANVLEQGPLLEEHARLFMYQLLRGLKYIHSA-NVLHRDLKPANLFINTEDLVLKIGDFG 166 (320)
T ss_dssp --CCSCSEEEEEEECCS-EEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCSGGGEEEETTTTEEEECCCT
T ss_pred ccccccCceeEEeeccC-CCHHHHhhcCCccHHHHHHHHHHHHHHHHHHHhC-CEecCCCCHHHEEEcCCCCeEEEccCc
Confidence 3467899999997 6999999988899999999999999999999999 999999999999997 56799999998
Q ss_pred CCC-------------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccch
Q 045127 381 IEY-------------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPEN 429 (508)
Q Consensus 381 ~~~-------------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 429 (508)
.+. .++.++||||||+++|||++|+.||....... ....+....+..
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~--~~~~~~~~~~~~ 244 (320)
T 2i6l_A 167 LARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELE--QMQLILESIPVV 244 (320)
T ss_dssp TCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHHHSCCC
T ss_pred cccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHhcCCC
Confidence 743 23456899999999999999999997543211 111111111100
Q ss_pred ----hhh-------hhhhcccCCcch-----HHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 430 ----LQL-------VVDERMMLTENM-----FDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 430 ----~~~-------~~~~~l~~~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
..+ .+.......... ......+.+++.+||+.||++|||++|+++.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (320)
T 2i6l_A 245 HEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH 306 (320)
T ss_dssp CHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred chhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence 000 000000000000 0124567889999999999999999999874
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-36 Score=319.50 Aligned_cols=231 Identities=14% Similarity=0.156 Sum_probs=180.6
Q ss_pred hhcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCC-HHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEE
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVS-REIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIV 313 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 313 (508)
..+.|+..+.||+|+||.||+|... ++..||+|++..... ......+.+|+.+++.++||||+++++++.+....++|
T Consensus 35 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 114 (494)
T 3lij_A 35 LSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLV 114 (494)
T ss_dssp HHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 3457899999999999999999984 689999999965432 22356789999999999999999999999999999999
Q ss_pred EeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecC---CCceEEeeccCC-------
Q 045127 314 TEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTD---NLEPLISRFKIE------- 382 (508)
Q Consensus 314 ~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~---~~~~kl~Dfg~~------- 382 (508)
|||+++|+|.+++. ...+++..+..++.||+.||+|||++ ||+||||||+||+++. ++.+||+|||++
T Consensus 115 ~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~ 193 (494)
T 3lij_A 115 MECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKH-NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQK 193 (494)
T ss_dssp EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTB
T ss_pred EecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCc
Confidence 99999999988876 67899999999999999999999999 9999999999999976 455999999974
Q ss_pred ------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcch
Q 045127 383 ------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENM 444 (508)
Q Consensus 383 ------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 444 (508)
..++.++||||+||++|+|++|+.||...... .+...+...... ...+..
T Consensus 194 ~~~~~~gt~~y~aPE~l~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~~~i~~~~~~----~~~~~~------ 261 (494)
T 3lij_A 194 KMKERLGTAYYIAPEVLRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQ--EILRKVEKGKYT----FDSPEW------ 261 (494)
T ss_dssp CBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHTCCC----CCSGGG------
T ss_pred cccccCCCcCeeCHHHHcccCCCchhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhCCCC----CCchhc------
Confidence 23567899999999999999999999753321 111111111000 000100
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH--HHHH
Q 045127 445 FDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM--ITRA 479 (508)
Q Consensus 445 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~--L~~i 479 (508)
......+.+++.+||+.||.+|||+.|+++. +.+.
T Consensus 262 ~~~s~~~~~li~~~L~~dp~~R~s~~e~l~hp~~~~~ 298 (494)
T 3lij_A 262 KNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEM 298 (494)
T ss_dssp TTSCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHHH
T ss_pred ccCCHHHHHHHHHHCCCChhhCccHHHHhcCcccccC
Confidence 1123457789999999999999999999864 5444
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-36 Score=302.64 Aligned_cols=237 Identities=15% Similarity=0.165 Sum_probs=184.5
Q ss_pred hhcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecC-----Ce
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSR-----RT 309 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-----~~ 309 (508)
..++|+..+.||+|+||.||+|... +|+.||||++...........+.+|+.++++++||||+++++++... ..
T Consensus 9 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 88 (353)
T 2b9h_A 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNE 88 (353)
T ss_dssp SCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCC
T ss_pred cccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccce
Confidence 4578999999999999999999974 68999999997665565677889999999999999999999987754 67
Q ss_pred eEEEEeecCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC------
Q 045127 310 RAIVTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------ 383 (508)
Q Consensus 310 ~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------ 383 (508)
.++||||+. |+|.+++....+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||.+.
T Consensus 89 ~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~-~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~ 166 (353)
T 2b9h_A 89 VYIIQELMQ-TDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGS-NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESA 166 (353)
T ss_dssp EEEEECCCS-EEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEECTTCCEEECCCTTCEECC---
T ss_pred EEEEEeccC-ccHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHeEEcCCCcEEEEeccccccccccc
Confidence 899999997 5999999888899999999999999999999999 99999999999999999999999998642
Q ss_pred --------------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhc-cc--
Q 045127 384 --------------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHY-PE-- 428 (508)
Q Consensus 384 --------------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~-~~-- 428 (508)
.++.++|||||||++|||++|+.||....... .+........ +.
T Consensus 167 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~ 245 (353)
T 2b9h_A 167 ADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRH-QLLLIFGIIGTPHSD 245 (353)
T ss_dssp -------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCST
T ss_pred ccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHH-HHHHHHHHhCCCchh
Confidence 23456899999999999999999997543211 1111111000 00
Q ss_pred ---------hhhhhhhhcccCCcch-----HHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 429 ---------NLQLVVDERMMLTENM-----FDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 429 ---------~~~~~~~~~l~~~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
...+.+.......... ......+.+++.+||+.||++|||+.|+++.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (353)
T 2b9h_A 246 NDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306 (353)
T ss_dssp TTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 0001110000000000 0124567789999999999999999999873
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-36 Score=319.30 Aligned_cols=227 Identities=13% Similarity=0.137 Sum_probs=182.6
Q ss_pred hhcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCC-CHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEE
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDV-SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIV 313 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 313 (508)
..++|+..+.||+|+||.||+|... +++.||||++.... .......+.+|++++++++||||+++++++.+....++|
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 99 (486)
T 3mwu_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (486)
T ss_dssp HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEE
Confidence 4567999999999999999999984 78999999985321 112357789999999999999999999999999999999
Q ss_pred EeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEec---CCCceEEeeccCCC------
Q 045127 314 TEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLT---DNLEPLISRFKIEY------ 383 (508)
Q Consensus 314 ~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~---~~~~~kl~Dfg~~~------ 383 (508)
|||+++|+|.+.+. ...+++..+..++.|++.||+|||++ ||+||||||+||+++ .++.+||+|||++.
T Consensus 100 ~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~ 178 (486)
T 3mwu_A 100 GELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH-NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT 178 (486)
T ss_dssp ECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC-
T ss_pred EEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCC
Confidence 99999999998886 67899999999999999999999999 999999999999995 45689999999753
Q ss_pred -------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcch
Q 045127 384 -------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENM 444 (508)
Q Consensus 384 -------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 444 (508)
.++.++||||+||++|+|++|+.||...... .+...+...... . ..+..
T Consensus 179 ~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~~~i~~~~~~-------~---~~~~~ 246 (486)
T 3mwu_A 179 KMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEY--DILKRVETGKYA-------F---DLPQW 246 (486)
T ss_dssp ---CCTTGGGGCCGGGGGSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHTCCC-------S---CSGGG
T ss_pred ccCCCcCCCCCCCHHHhCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhCCCC-------C---CCccc
Confidence 2346789999999999999999999753221 111111111000 0 00000
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 445 FDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 445 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
......+.+++.+||+.||.+|||+.|+++.
T Consensus 247 ~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 247 RTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp GGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred CCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 1124457789999999999999999999985
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-36 Score=309.89 Aligned_cols=172 Identities=13% Similarity=0.187 Sum_probs=150.9
Q ss_pred hhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCC-CHHHHHHHHHHHHHHhhcCCCCccceeeEEecC-----C
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDV-SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSR-----R 308 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-----~ 308 (508)
..++|+..+.||+|+||.||+|.. .+++.||||++.... .....+++.+|+.++++++||||+++++++... .
T Consensus 24 i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 103 (432)
T 3n9x_A 24 VPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFD 103 (432)
T ss_dssp CCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred ecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCC
Confidence 457899999999999999999997 468899999997543 334567899999999999999999999998765 5
Q ss_pred eeEEEEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC----
Q 045127 309 TRAIVTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY---- 383 (508)
Q Consensus 309 ~~~lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~---- 383 (508)
..|+||||++ |+|.+++. ...+++..+..++.||+.||+|||+. ||+||||||+|||++.++.+||+|||++.
T Consensus 104 ~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~-givHrDlkp~NILl~~~~~~kL~DFGla~~~~~ 181 (432)
T 3n9x_A 104 ELYIVLEIAD-SDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHES-GIIHRDLKPANCLLNQDCSVKVCDFGLARTINS 181 (432)
T ss_dssp CEEEEEECCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTCCEEECCCTTCEEC--
T ss_pred eEEEEEecCC-cCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC-CCCCCCCCHHHeEECCCCCEEEccCCCcccccc
Confidence 6899999986 59999998 45699999999999999999999999 99999999999999999999999998642
Q ss_pred ----------------------------------------------CCCCcchhhHHHHHHHHHHhCCCCCc
Q 045127 384 ----------------------------------------------QHRSTKYVYKFGLFLLEMITNRRPLE 409 (508)
Q Consensus 384 ----------------------------------------------~~~~~~Dv~SlGvil~elltg~~P~~ 409 (508)
.++.++|||||||++|||++|..||.
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 182 EKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp -----------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred cccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 24567899999999999998665554
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-36 Score=304.68 Aligned_cols=240 Identities=16% Similarity=0.143 Sum_probs=175.8
Q ss_pred HHHhhcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCHH----HHHHHHHHHHHHhhcCCCCccceeeEEecC
Q 045127 233 LKAATNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSRE----IRDEFVEECKLLVQFQHKNLIRVLGWNNSR 307 (508)
Q Consensus 233 l~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 307 (508)
+....++|+..+.||+|+||.||+|... +|+.||||++....... ..+.+.+|+.++++++||||+++++++...
T Consensus 5 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 84 (346)
T 1ua2_A 5 VKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHK 84 (346)
T ss_dssp --------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCT
T ss_pred hHHHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeC
Confidence 3455678999999999999999999974 68999999996432221 134688999999999999999999999999
Q ss_pred CeeEEEEeecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC--
Q 045127 308 RTRAIVTEWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY-- 383 (508)
Q Consensus 308 ~~~~lv~e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~-- 383 (508)
...++||||+++ +|.+++. ...+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||.+.
T Consensus 85 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~ 162 (346)
T 1ua2_A 85 SNISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQH-WILHRDLKPNNLLLDENGVLKLADFGLAKSF 162 (346)
T ss_dssp TCCEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTCCEEECCCGGGSTT
T ss_pred CceEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHC-CEECCCCCHHHEEEcCCCCEEEEecccceec
Confidence 999999999986 8988887 34689999999999999999999999 99999999999999999999999998642
Q ss_pred --------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccc---hhhhh-
Q 045127 384 --------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPE---NLQLV- 433 (508)
Q Consensus 384 --------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~---~~~~~- 433 (508)
.++.++|||||||++|||++|..||....... .+.......... ...+.
T Consensus 163 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~ 241 (346)
T 1ua2_A 163 GSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLD-QLTRIFETLGTPTEEQWPDMC 241 (346)
T ss_dssp TSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCTTTSSSTT
T ss_pred cCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHH-HHHHHHHHcCCCChhhhhhhc
Confidence 23457899999999999999999987543211 112211111100 00000
Q ss_pred --hhh----cccCCcc---hHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 434 --VDE----RMMLTEN---MFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 434 --~~~----~l~~~~~---~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
.+. ....... .......+.+++.+||+.||++|||+.|+++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 242 SLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp SSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred cCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 000 0000000 01123568889999999999999999999875
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-36 Score=314.04 Aligned_cols=167 Identities=13% Similarity=0.183 Sum_probs=138.1
Q ss_pred hhcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCC-CHHHHHHHHHHHHHHhhcCCCCccceeeEEec-----CC
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDV-SREIRDEFVEECKLLVQFQHKNLIRVLGWNNS-----RR 308 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-----~~ 308 (508)
..++|+..+.||+|+||.||+|... +++.||||++.... .....+++.+|+.++++++||||+++++++.. ..
T Consensus 51 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 130 (458)
T 3rp9_A 51 IPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFD 130 (458)
T ss_dssp SCTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred cCCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCc
Confidence 3478999999999999999999974 68999999996543 33456789999999999999999999999853 35
Q ss_pred eeEEEEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC----
Q 045127 309 TRAIVTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY---- 383 (508)
Q Consensus 309 ~~~lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~---- 383 (508)
..|+||||+ +|+|.+++. ...+++..+..++.||+.||+|||+. ||+||||||+|||++.++.+||+|||++.
T Consensus 131 ~~~lv~e~~-~~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~-~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 208 (458)
T 3rp9_A 131 ELYVVLEIA-DSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSA-GILHRDLKPANCLVNQDCSVKVCDFGLARTVDY 208 (458)
T ss_dssp CEEEEECCC-SEEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTCCEEECCCTTCBCTTS
T ss_pred eEEEEEecc-ccchhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhC-CcCCCCCChhhEEECCCCCEeecccccchhccC
Confidence 689999998 568999887 55799999999999999999999999 99999999999999999999999999753
Q ss_pred ---------------------------------------------------CCCCcchhhHHHHHHHHHHhC
Q 045127 384 ---------------------------------------------------QHRSTKYVYKFGLFLLEMITN 404 (508)
Q Consensus 384 ---------------------------------------------------~~~~~~Dv~SlGvil~elltg 404 (508)
.++.++|||||||++|||++|
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 209 PENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp CTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred ccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 235678999999999999993
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-36 Score=294.83 Aligned_cols=222 Identities=18% Similarity=0.158 Sum_probs=175.4
Q ss_pred hhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCC---HHHHHHHHHHHHHHhhcCCCCccceeeEEe--cCCe
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVS---REIRDEFVEECKLLVQFQHKNLIRVLGWNN--SRRT 309 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~--~~~~ 309 (508)
..++|+..+.||+|+||.||+|.. .+++.||+|++..... ....+.+.+|+.++++++||||+++++++. ....
T Consensus 3 l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (305)
T 2wtk_C 3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQK 82 (305)
T ss_dssp --CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---C
T ss_pred cccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCe
Confidence 357899999999999999999997 4689999999964321 124678999999999999999999999984 4457
Q ss_pred eEEEEeecCCCCHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCCC--
Q 045127 310 RAIVTEWTNGGNVELWLS---ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEYQ-- 384 (508)
Q Consensus 310 ~~lv~e~~~~gsL~~~l~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~-- 384 (508)
.++||||++++ |.+++. ...+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||.+..
T Consensus 83 ~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~-~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~ 160 (305)
T 2wtk_C 83 MYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQ-GIVHKDIKPGNLLLTTGGTLKISALGVAEALH 160 (305)
T ss_dssp EEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHC-CeeecCCCcccEEEcCCCcEEeeccccccccC
Confidence 89999999876 666665 56799999999999999999999999 999999999999999999999999987521
Q ss_pred -----------------------------CCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhh
Q 045127 385 -----------------------------HRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVD 435 (508)
Q Consensus 385 -----------------------------~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (508)
.+.++||||||+++|||++|+.||..... ....... ..
T Consensus 161 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~~~~i--------~~ 227 (305)
T 2wtk_C 161 PFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNI-----YKLFENI--------GK 227 (305)
T ss_dssp TTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSH-----HHHHHHH--------HH
T ss_pred ccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchH-----HHHHHHH--------hc
Confidence 13478999999999999999999974321 1111110 01
Q ss_pred hcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 436 ERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 436 ~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
....... .....+.+++.+||+.||++|||++|+++.
T Consensus 228 ~~~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 228 GSYAIPG---DCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp CCCCCCS---SSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred CCCCCCC---ccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 1111111 123456788999999999999999999975
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-36 Score=304.11 Aligned_cols=226 Identities=10% Similarity=0.086 Sum_probs=183.8
Q ss_pred HHhhcCCCCCceeeecCCeEEEEEE------ECCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcC---CCCccceeeEE
Q 045127 234 KAATNGFSKKNLVGKNEGAAIYKGI------LRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQ---HKNLIRVLGWN 304 (508)
Q Consensus 234 ~~~~~~~~~~~~lg~G~~g~V~~~~------~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~~~~~~ 304 (508)
....++|...+.||+|+||.||+|. ..+++.||+|+++... ..++..|++++++++ |+||+++++++
T Consensus 61 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~e~~~~~~l~~~~~~~iv~~~~~~ 136 (365)
T 3e7e_A 61 QLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN----PWEFYIGTQLMERLKPSMQHMFMKFYSAH 136 (365)
T ss_dssp ECSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC----HHHHHHHHHHHHHSCGGGGGGBCCEEEEE
T ss_pred EECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC----hhHHHHHHHHHHHhhhhhhhhhhhhheee
Confidence 3455779999999999999999994 3468899999996542 346778888888876 99999999999
Q ss_pred ecCCeeEEEEeecCCCCHHHHhc------cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecC--------
Q 045127 305 NSRRTRAIVTEWTNGGNVELWLS------ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTD-------- 370 (508)
Q Consensus 305 ~~~~~~~lv~e~~~~gsL~~~l~------~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~-------- 370 (508)
..++..++||||+++|+|.+++. ...+++..+..|+.||+.||+|||++ ||+||||||+|||++.
T Consensus 137 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~-~ivHrDiKp~NIll~~~~~~~~~~ 215 (365)
T 3e7e_A 137 LFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC-EIIHGDIKPDNFILGNGFLEQDDE 215 (365)
T ss_dssp ECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT-TEECCCCSGGGEEECGGGTCC---
T ss_pred ecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC-CeecCCCCHHHEEecccccCcccc
Confidence 99999999999999999999996 46799999999999999999999999 9999999999999998
Q ss_pred ---CCceEEeeccCCC-----------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccH
Q 045127 371 ---NLEPLISRFKIEY-----------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGF 418 (508)
Q Consensus 371 ---~~~~kl~Dfg~~~-----------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~ 418 (508)
++.+||+|||++. .++.++|||||||++|||+||+.||.....+...
T Consensus 216 ~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~- 294 (365)
T 3e7e_A 216 DDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECK- 294 (365)
T ss_dssp ---CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEEE-
T ss_pred ccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCcee-
Confidence 8999999999751 3467899999999999999999999654322110
Q ss_pred HHHHHHhccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCC-CCHHHHHHHHHHHHhhCC
Q 045127 419 IEYIRMHYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKL-PSLVQIYNMITRAYKSCP 484 (508)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~R-Ps~~evl~~L~~i~~~~~ 484 (508)
....+.... ....+.+++..|++.+|.+| |+++++.+.|+++.+...
T Consensus 295 ---------------~~~~~~~~~----~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~~~ 342 (365)
T 3e7e_A 295 ---------------PEGLFRRLP----HLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQHY 342 (365)
T ss_dssp ---------------ECSCCTTCS----SHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHHHT
T ss_pred ---------------echhccccC----cHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHHhh
Confidence 011111111 13345567788999999999 689999999998877643
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-36 Score=308.23 Aligned_cols=222 Identities=14% Similarity=0.180 Sum_probs=174.2
Q ss_pred hcCCCCC-ceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCHHHHHHHHHHHHHHhh-cCCCCccceeeEEec----CCe
Q 045127 237 TNGFSKK-NLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSREIRDEFVEECKLLVQ-FQHKNLIRVLGWNNS----RRT 309 (508)
Q Consensus 237 ~~~~~~~-~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~~~~~~~~----~~~ 309 (508)
.++|... +.||+|+||.||+|... +++.||||++... ..+.+|+.++.+ .+||||+++++++.. ...
T Consensus 60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~ 133 (400)
T 1nxk_A 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKC 133 (400)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc------hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcE
Confidence 4566665 68999999999999974 6899999999532 356788888754 589999999998875 567
Q ss_pred eEEEEeecCCCCHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecC---CCceEEeeccCC-
Q 045127 310 RAIVTEWTNGGNVELWLSE---SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTD---NLEPLISRFKIE- 382 (508)
Q Consensus 310 ~~lv~e~~~~gsL~~~l~~---~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~---~~~~kl~Dfg~~- 382 (508)
.++||||+++|+|.+++.. ..+++.++..|+.||+.||+|||++ ||+||||||+|||++. ++.+||+|||++
T Consensus 134 ~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~ 212 (400)
T 1nxk_A 134 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI-NIAHRDVKPENLLYTSKRPNAILKLTDFGFAK 212 (400)
T ss_dssp EEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEESSSSTTCCEEECCCTTCE
T ss_pred EEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCcCcceEEEecCCCCccEEEEeccccc
Confidence 8999999999999999973 3589999999999999999999999 9999999999999997 789999999874
Q ss_pred -------------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcc--cHHHHHHHhccchhhhhhh
Q 045127 383 -------------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEA--GFIEYIRMHYPENLQLVVD 435 (508)
Q Consensus 383 -------------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 435 (508)
..++.++|||||||++|||++|+.||........ .....+...... ...
T Consensus 213 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~----~~~ 288 (400)
T 1nxk_A 213 ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE----FPN 288 (400)
T ss_dssp ECC-----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCC----CCT
T ss_pred ccCCCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCccc----CCC
Confidence 2356789999999999999999999975432211 121111111000 000
Q ss_pred hcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 436 ERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 436 ~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
+.. ......+.+++.+||+.||++|||+.|+++.
T Consensus 289 ~~~------~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 289 PEW------SEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp TTT------TTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ccc------ccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 000 1124567789999999999999999999975
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-36 Score=303.02 Aligned_cols=237 Identities=14% Similarity=0.168 Sum_probs=187.7
Q ss_pred CCCCHHHHHHhhcCCCCC-ceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCH-HHHHHHHHHHHHHhhcC-CCCcccee
Q 045127 226 HKFTTWMLKAATNGFSKK-NLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSR-EIRDEFVEECKLLVQFQ-HKNLIRVL 301 (508)
Q Consensus 226 ~~~~~~~l~~~~~~~~~~-~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~~~ 301 (508)
+.+.+.......+.|... +.||+|+||.||+|... +++.||+|++...... .....+.+|+.+++++. ||||++++
T Consensus 16 ~n~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~ 95 (327)
T 3lm5_A 16 ENLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLH 95 (327)
T ss_dssp CCCCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEE
T ss_pred hhhHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEE
Confidence 344445556677778877 88999999999999974 6899999998643322 34678899999999995 79999999
Q ss_pred eEEecCCeeEEEEeecCCCCHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecC---CCceE
Q 045127 302 GWNNSRRTRAIVTEWTNGGNVELWLS---ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTD---NLEPL 375 (508)
Q Consensus 302 ~~~~~~~~~~lv~e~~~~gsL~~~l~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~---~~~~k 375 (508)
+++......++||||+++|+|.+++. ...+++.++..++.|++.||+|||++ ||+||||||+||+++. ++.+|
T Consensus 96 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~-givH~Dikp~NIl~~~~~~~~~~k 174 (327)
T 3lm5_A 96 EVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN-NIVHLDLKPQNILLSSIYPLGDIK 174 (327)
T ss_dssp EEEECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEESCBTTBCCEE
T ss_pred EEEEeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC-CeecCcCChHHEEEecCCCCCcEE
Confidence 99999999999999999999999986 36789999999999999999999999 9999999999999997 78999
Q ss_pred EeeccCC--------------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccch
Q 045127 376 ISRFKIE--------------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPEN 429 (508)
Q Consensus 376 l~Dfg~~--------------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 429 (508)
|+|||.+ ..++.++||||||+++|||++|+.||....... ....+......
T Consensus 175 L~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~--~~~~i~~~~~~- 251 (327)
T 3lm5_A 175 IVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQE--TYLNISQVNVD- 251 (327)
T ss_dssp ECCGGGCEEC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHHTCCC-
T ss_pred EeeCccccccCCccccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchH--HHHHHHhcccc-
Confidence 9999874 235678999999999999999999997533211 11111111000
Q ss_pred hhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 430 LQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 430 ~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
. ..+. .......+.+++.+||+.||.+|||++|+++.
T Consensus 252 ~---~~~~------~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 252 Y---SEET------FSSVSQLATDFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp C---CTTT------TTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred c---Cchh------hcccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence 0 0000 01124457789999999999999999999874
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-36 Score=312.06 Aligned_cols=234 Identities=12% Similarity=0.165 Sum_probs=184.1
Q ss_pred hhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCC-CCccceeeEEecCCeeEEE
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQH-KNLIRVLGWNNSRRTRAIV 313 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~~~~~~~~~~~~~lv 313 (508)
..++|+..++||+|+||.||+|.+ .+++.||||++...... .++.+|+++++.++| +++..+..++...+..++|
T Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~---~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lv 81 (483)
T 3sv0_A 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH---PQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLV 81 (483)
T ss_dssp ETTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS---CCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEE
T ss_pred cCCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc---HHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEE
Confidence 357899999999999999999997 56899999998644332 357899999999986 5566666677778889999
Q ss_pred EeecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEe---cCCCceEEeeccCCC-----
Q 045127 314 TEWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLL---TDNLEPLISRFKIEY----- 383 (508)
Q Consensus 314 ~e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll---~~~~~~kl~Dfg~~~----- 383 (508)
|||+ +++|.+++. ...+++.++..|+.||+.||+|||++ ||+||||||+|||+ +.++.+||+|||++.
T Consensus 82 me~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~-gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (483)
T 3sv0_A 82 MDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK-SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDT 159 (483)
T ss_dssp EECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred EECC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC-CEeecccCcceEEEecCCCCCeEEEEeCCcceeccCC
Confidence 9999 999999998 67899999999999999999999999 99999999999999 688999999998752
Q ss_pred -----------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhh
Q 045127 384 -----------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVV 434 (508)
Q Consensus 384 -----------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (508)
.++.++|||||||++|||++|+.||........ ...+...........+
T Consensus 160 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~--~~~~~~i~~~~~~~~~ 237 (483)
T 3sv0_A 160 STHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTK--KQKYEKISEKKVATSI 237 (483)
T ss_dssp TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSH--HHHHHHHHHHHHHSCH
T ss_pred ccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhH--HHHHHHHhhccccccH
Confidence 224467999999999999999999986543221 1111111100011111
Q ss_pred hhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhh
Q 045127 435 DERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKS 482 (508)
Q Consensus 435 ~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 482 (508)
..... ....++.+++..||+.||++||++.+|++.|+++...
T Consensus 238 ~~l~~------~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~ 279 (483)
T 3sv0_A 238 EALCR------GYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIR 279 (483)
T ss_dssp HHHHT------TSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred HHHhc------CCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHH
Confidence 11000 1135678899999999999999999999999998654
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-37 Score=308.08 Aligned_cols=226 Identities=14% Similarity=0.126 Sum_probs=181.3
Q ss_pred hcCCCCCceeeecCCeEEEEEEE----CCCCEEEEEEecCCC---CHHHHHHHHHHHHHHhhc-CCCCccceeeEEecCC
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGIL----RDGTRVKIEIYKGDV---SREIRDEFVEECKLLVQF-QHKNLIRVLGWNNSRR 308 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~----~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 308 (508)
.++|+..+.||+|+||.||+|+. .+++.||||+++... .....+.+.+|+++++++ +||||+++++++....
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 46899999999999999999997 368999999986432 112345677899999999 6999999999999999
Q ss_pred eeEEEEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC----
Q 045127 309 TRAIVTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY---- 383 (508)
Q Consensus 309 ~~~lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~---- 383 (508)
..++||||+++|+|.+++. ...+++..+..++.|++.||+|||++ ||+||||||+|||++.++.+||+|||++.
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 211 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKL-GIIYRDIKLENILLDSNGHVVLTDFGLSKEFVA 211 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTSCEEESCSSEEEECCG
T ss_pred eEEEEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEECCCCcEEEeeCCCCeeccc
Confidence 9999999999999999998 56799999999999999999999999 99999999999999999999999998631
Q ss_pred --------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhc
Q 045127 384 --------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDER 437 (508)
Q Consensus 384 --------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (508)
.++.++|||||||++|||++|+.||....... .......... ...
T Consensus 212 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~-~~~~~~~~~~--------~~~ 282 (355)
T 1vzo_A 212 DETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKN-SQAEISRRIL--------KSE 282 (355)
T ss_dssp GGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCC-CHHHHHHHHH--------HCC
T ss_pred CCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccc-hHHHHHHHHh--------ccC
Confidence 24567899999999999999999997543221 1111111110 000
Q ss_pred ccCCcchHHHHHHHHHHHHhcCCCCCCCCC-----CHHHHHHH
Q 045127 438 MMLTENMFDQAEQGLGLGLMCTDQPTGKLP-----SLVQIYNM 475 (508)
Q Consensus 438 l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~ 475 (508)
.... ......+.+++.+||+.||.+|| |++|+++.
T Consensus 283 ~~~~---~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h 322 (355)
T 1vzo_A 283 PPYP---QEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH 322 (355)
T ss_dssp CCCC---TTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred CCCC---cccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence 0000 11234567899999999999999 99999875
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-35 Score=301.31 Aligned_cols=236 Identities=13% Similarity=0.100 Sum_probs=182.0
Q ss_pred hhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCC-CHHHHHHHHHHHHHHhhcCCCCccceeeEEecCC-----
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDV-SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRR----- 308 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~----- 308 (508)
..++|+..+.||+|+||.||+|.. .+++.||||++.... .....+.+.+|+.+++.++||||+++++++....
T Consensus 23 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 102 (371)
T 2xrw_A 23 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 102 (371)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTC
T ss_pred hhhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccc
Confidence 347899999999999999999997 468999999997543 3445678899999999999999999999997654
Q ss_pred -eeEEEEeecCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC----
Q 045127 309 -TRAIVTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY---- 383 (508)
Q Consensus 309 -~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~---- 383 (508)
..++||||+++ +|.+.+. ..+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||.+.
T Consensus 103 ~~~~lv~e~~~~-~l~~~~~-~~~~~~~~~~i~~qi~~al~~lH~~-~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~ 179 (371)
T 2xrw_A 103 QDVYIVMELMDA-NLCQVIQ-MELDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 179 (371)
T ss_dssp CEEEEEEECCSE-EHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTSCEEECCCCC------
T ss_pred cceEEEEEcCCC-CHHHHHh-hccCHHHHHHHHHHHHHHHHHHHHC-CeecccCCHHHEEEcCCCCEEEEEeeccccccc
Confidence 67999999975 7888875 5689999999999999999999999 99999999999999999999999998742
Q ss_pred ----------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHH----------hccchhh
Q 045127 384 ----------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRM----------HYPENLQ 431 (508)
Q Consensus 384 ----------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~----------~~~~~~~ 431 (508)
.++.++|||||||++|||++|+.||....... .+...+.. .......
T Consensus 180 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~ 258 (371)
T 2xrw_A 180 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHID-QWNKVIEQLGTPCPEFMKKLQPTVR 258 (371)
T ss_dssp ----------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHC-CCCCCHHHHTTSCHHHH
T ss_pred ccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCHHHHHHhhhHHH
Confidence 35678999999999999999999997543211 11111100 0000000
Q ss_pred hh---------------hhhcc-c-CCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 432 LV---------------VDERM-M-LTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 432 ~~---------------~~~~l-~-~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
.. ..... . ...........+.+++.+||+.||++|||++|+++.
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 319 (371)
T 2xrw_A 259 TYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 319 (371)
T ss_dssp HHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred HHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence 00 00000 0 001112235678899999999999999999999975
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-36 Score=297.53 Aligned_cols=227 Identities=13% Similarity=0.181 Sum_probs=183.2
Q ss_pred HHHhhcCCCCCceeeecCCeEEEEEEECCCCEEEEEEecCCC-CHHHHHHHHHHHHHHhhcC--CCCccceeeEEecCCe
Q 045127 233 LKAATNGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDV-SREIRDEFVEECKLLVQFQ--HKNLIRVLGWNNSRRT 309 (508)
Q Consensus 233 l~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~ 309 (508)
+....++|+..+.||+|+||.||+|...+++.||||++.... .....+.+.+|+.++++++ ||||+++++++..+..
T Consensus 23 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~ 102 (313)
T 3cek_A 23 MSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQY 102 (313)
T ss_dssp EEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSE
T ss_pred eeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCE
Confidence 344567899999999999999999999889999999996443 3456788999999999997 5999999999999999
Q ss_pred eEEEEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-----
Q 045127 310 RAIVTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY----- 383 (508)
Q Consensus 310 ~~lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~----- 383 (508)
.++||| +.+++|.+++. ...+++..+..++.|+++||+|||++ ||+||||||+||+++ ++.+||+|||.+.
T Consensus 103 ~~lv~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~dlkp~NIl~~-~~~~kL~Dfg~~~~~~~~ 179 (313)
T 3cek_A 103 IYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH-GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPD 179 (313)
T ss_dssp EEEEEC-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEEE-TTEEEECCCSSSCC----
T ss_pred EEEEEe-cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CceecCCCcccEEEE-CCeEEEeeccccccccCc
Confidence 999999 56889999997 56789999999999999999999999 999999999999997 4899999998752
Q ss_pred -----------------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccc
Q 045127 384 -----------------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPE 428 (508)
Q Consensus 384 -----------------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 428 (508)
.++.++||||||+++|||++|+.||.........+
T Consensus 180 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~---------- 249 (313)
T 3cek_A 180 TTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL---------- 249 (313)
T ss_dssp ----------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHH----------
T ss_pred cccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHH----------
Confidence 23447899999999999999999997543221111
Q ss_pred hhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 429 NLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 429 ~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
....++...... .......+.+++.+||+.||++|||+.|+++.
T Consensus 250 --~~~~~~~~~~~~-~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 293 (313)
T 3cek_A 250 --HAIIDPNHEIEF-PDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 293 (313)
T ss_dssp --HHHHCTTSCCCC-CCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred --HHHHhcccccCC-cccchHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 111111110000 00113457788999999999999999999875
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-36 Score=324.51 Aligned_cols=231 Identities=16% Similarity=0.270 Sum_probs=188.3
Q ss_pred HhhcCCCCCceeeecCCeEEEEEEECC----CCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCee
Q 045127 235 AATNGFSKKNLVGKNEGAAIYKGILRD----GTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTR 310 (508)
Q Consensus 235 ~~~~~~~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 310 (508)
...++|+..+.||+|+||.||+|.+.. +..||+|.++........+.+.+|+.++++++||||+++++++. .+..
T Consensus 387 i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~ 465 (656)
T 2j0j_A 387 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPV 465 (656)
T ss_dssp CCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSC
T ss_pred cccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCce
Confidence 344667888999999999999999742 45799999976666666788999999999999999999999985 4568
Q ss_pred EEEEeecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-----
Q 045127 311 AIVTEWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY----- 383 (508)
Q Consensus 311 ~lv~e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~----- 383 (508)
++||||+++|+|.+++. ...+++..+..++.|++.||+|||++ ||+||||||+|||++.++.+||+|||++.
T Consensus 466 ~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~ 544 (656)
T 2j0j_A 466 WIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK-RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 544 (656)
T ss_dssp EEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC-
T ss_pred EEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC-CccccccchHhEEEeCCCCEEEEecCCCeecCCC
Confidence 99999999999999998 34689999999999999999999999 99999999999999999999999999753
Q ss_pred -----------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhccc
Q 045127 384 -----------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMM 439 (508)
Q Consensus 384 -----------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 439 (508)
.++.++|||||||++|||++ |..||...... .....+..... ..
T Consensus 545 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~--~~~~~i~~~~~----------~~ 612 (656)
T 2j0j_A 545 TYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN--DVIGRIENGER----------LP 612 (656)
T ss_dssp ---------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHHHHHTCC----------CC
T ss_pred cceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHH--HHHHHHHcCCC----------CC
Confidence 23457899999999999997 99999754321 11111111110 00
Q ss_pred CCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhh
Q 045127 440 LTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKS 482 (508)
Q Consensus 440 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 482 (508)
.. ......+.+++.+||+.||++|||+.|+++.|+++.+.
T Consensus 613 ~~---~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~ 652 (656)
T 2j0j_A 613 MP---PNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 652 (656)
T ss_dssp CC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CC---ccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence 01 11235677899999999999999999999999998654
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-36 Score=304.52 Aligned_cols=237 Identities=14% Similarity=0.172 Sum_probs=173.0
Q ss_pred hhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCC-CHHHHHHHHHHHHHHhhcCCCCccceeeEEecC------
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDV-SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSR------ 307 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------ 307 (508)
..++|+..+.||+|+||.||+|.. .+|+.||||++.... .....+.+.+|+.+++.++||||+++++++...
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~ 106 (367)
T 2fst_X 27 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 106 (367)
T ss_dssp EETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred CCCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccC
Confidence 457899999999999999999997 568999999996543 334567889999999999999999999998754
Q ss_pred CeeEEEEeecCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC-----
Q 045127 308 RTRAIVTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE----- 382 (508)
Q Consensus 308 ~~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~----- 382 (508)
...++||||+ +++|.+++....+++..+..++.||++||+|||+. ||+||||||+||+++.++.+||+|||++
T Consensus 107 ~~~~lv~e~~-~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~ 184 (367)
T 2fst_X 107 NDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDCELKILDFGLARHTAD 184 (367)
T ss_dssp CCCEEEEECC-CEECC-----CCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTCCEEECC---------
T ss_pred CeEEEEeccc-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeCCCCHhhEEECCCCCEEEeeccccccccc
Confidence 5679999999 78999999888899999999999999999999999 9999999999999999999999999874
Q ss_pred --------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhcc----------c-hhh
Q 045127 383 --------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYP----------E-NLQ 431 (508)
Q Consensus 383 --------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~----------~-~~~ 431 (508)
..++.++|||||||++|||++|+.||....... .+......... . ...
T Consensus 185 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~l~~i~~~~g~p~~~~~~~~~~~~~~ 263 (367)
T 2fst_X 185 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID-QLKLILRLVGTPGAELLKKISSESAR 263 (367)
T ss_dssp ------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCSCCHHHHTTCCCHHHH
T ss_pred cCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCHHHHHHhhhHHHH
Confidence 245678999999999999999999997543211 11111111100 0 011
Q ss_pred hhhhhcccCCcchH-----HHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 432 LVVDERMMLTENMF-----DQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 432 ~~~~~~l~~~~~~~-----~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
..+........... .....+.+++.+||+.||++|||+.|+++.
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 264 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp HHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 11110000000000 113457889999999999999999999874
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-36 Score=317.81 Aligned_cols=225 Identities=15% Similarity=0.157 Sum_probs=182.3
Q ss_pred hhcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCC--HHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEE
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVS--REIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAI 312 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 312 (508)
..++|+..+.||+|+||.||+|... +|+.||+|++..... ......+.+|++++++++||||+++++++.+.+..++
T Consensus 182 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l 261 (576)
T 2acx_A 182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCL 261 (576)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred cccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEE
Confidence 3467889999999999999999984 699999999954211 1234668899999999999999999999999999999
Q ss_pred EEeecCCCCHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC------
Q 045127 313 VTEWTNGGNVELWLSE---SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------ 383 (508)
Q Consensus 313 v~e~~~~gsL~~~l~~---~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------ 383 (508)
||||+++|+|.+++.. ..+++..+..++.||+.||+|||++ ||+||||||+|||++.++.+||+|||++.
T Consensus 262 VmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~-gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~ 340 (576)
T 2acx_A 262 VLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE-RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ 340 (576)
T ss_dssp EECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTSCEEECCCTTCEECCTTC
T ss_pred EEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC-CEeccCCchheEEEeCCCCeEEEecccceecccCc
Confidence 9999999999999873 3499999999999999999999999 99999999999999999999999998752
Q ss_pred --------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcc--cHHHHHHHhccchhhhhhhhcccCC
Q 045127 384 --------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEA--GFIEYIRMHYPENLQLVVDERMMLT 441 (508)
Q Consensus 384 --------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~ 441 (508)
.++.++|||||||++|||++|+.||........ .+...+.. .+ ..+.
T Consensus 341 ~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~-~~--------~~~p-- 409 (576)
T 2acx_A 341 TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKE-VP--------EEYS-- 409 (576)
T ss_dssp CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHH-CC--------CCCC--
T ss_pred cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhc-cc--------ccCC--
Confidence 346678999999999999999999975432211 11111111 00 0010
Q ss_pred cchHHHHHHHHHHHHhcCCCCCCCCC-----CHHHHHHH
Q 045127 442 ENMFDQAEQGLGLGLMCTDQPTGKLP-----SLVQIYNM 475 (508)
Q Consensus 442 ~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~ 475 (508)
......+.+++.+||+.||.+|| +++||++.
T Consensus 410 ---~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 410 ---ERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp ---TTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred ---ccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence 11234677889999999999999 78999864
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-36 Score=305.98 Aligned_cols=235 Identities=14% Similarity=0.134 Sum_probs=179.5
Q ss_pred hcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcC--------CCCccceeeEEe--
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQ--------HKNLIRVLGWNN-- 305 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~--------h~niv~~~~~~~-- 305 (508)
.++|+..+.||+|+||.||+|+. .+++.||||+++.. ....+.+.+|+.++++++ |+||+++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~ 113 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA--EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKIS 113 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC--HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC--CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeec
Confidence 47899999999999999999997 56889999999643 345678899999999985 788999999987
Q ss_pred --cCCeeEEEEeecCCCCHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCC--------
Q 045127 306 --SRRTRAIVTEWTNGGNVELWLS---ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNL-------- 372 (508)
Q Consensus 306 --~~~~~~lv~e~~~~gsL~~~l~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~-------- 372 (508)
.....++||||+ ++++.+++. ...+++..+..++.||+.||+|||+++||+||||||+|||++.++
T Consensus 114 ~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~~~~~~~~~ 192 (397)
T 1wak_A 114 GVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAA 192 (397)
T ss_dssp ETTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCHHHHHHHHH
T ss_pred CCCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccchhhhhhhh
Confidence 556789999999 556666554 256999999999999999999999965899999999999999775
Q ss_pred -----------------------------------------ceEEeeccCC------------------------CCCCC
Q 045127 373 -----------------------------------------EPLISRFKIE------------------------YQHRS 387 (508)
Q Consensus 373 -----------------------------------------~~kl~Dfg~~------------------------~~~~~ 387 (508)
.+||+|||.+ ..++.
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ 272 (397)
T 1wak_A 193 EATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNT 272 (397)
T ss_dssp HHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCHHHHHTSCCCT
T ss_pred hhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCcccCChhhcCCCCCc
Confidence 7999999975 23678
Q ss_pred cchhhHHHHHHHHHHhCCCCCcccccCccc----HHHHHHHhc---cchhh-------hhhhh-----------------
Q 045127 388 TKYVYKFGLFLLEMITNRRPLEEFERGEAG----FIEYIRMHY---PENLQ-------LVVDE----------------- 436 (508)
Q Consensus 388 ~~Dv~SlGvil~elltg~~P~~~~~~~~~~----~~~~~~~~~---~~~~~-------~~~~~----------------- 436 (508)
++|||||||++|||++|+.||......... ....+.... +.... ..+..
T Consensus 273 ~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (397)
T 1wak_A 273 PADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFE 352 (397)
T ss_dssp HHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHH
T ss_pred HHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchhH
Confidence 899999999999999999999764432211 111111100 00000 00000
Q ss_pred -cccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 437 -RMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 437 -~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
..............+.+++.+||+.||++|||++|+++
T Consensus 353 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 353 VLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp HHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred hhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 00001112455678899999999999999999999986
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-36 Score=305.19 Aligned_cols=242 Identities=9% Similarity=0.092 Sum_probs=179.3
Q ss_pred HHhhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEec------
Q 045127 234 KAATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNS------ 306 (508)
Q Consensus 234 ~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~------ 306 (508)
....++|+..+.||+|+||.||+|.. .+|+.||||++..... ...+|+++++.++||||+++++++..
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~-----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 77 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR-----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEP 77 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT-----SCCHHHHHHTTCCCTTBCCEEEEEEEC-----
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc-----hHHHHHHHHHHcCCCCccchhheeeecCcccc
Confidence 45667899999999999999999997 5789999999865432 23479999999999999999999853
Q ss_pred --------------------------------CCeeEEEEeecCCCCHHHHhc-----cCCCCHHHHHHHHHHHHHHHHH
Q 045127 307 --------------------------------RRTRAIVTEWTNGGNVELWLS-----ESAPSWKHRLKVLIGVVEAMCY 349 (508)
Q Consensus 307 --------------------------------~~~~~lv~e~~~~gsL~~~l~-----~~~l~~~~~~~i~~~i~~~L~~ 349 (508)
....++||||++ |+|.+.+. ...+++..+..++.|++.||+|
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~ 156 (383)
T 3eb0_A 78 KPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGF 156 (383)
T ss_dssp --------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence 234789999998 58877765 5789999999999999999999
Q ss_pred HhhCCCccccCCCCCCEEec-CCCceEEeeccCCC---------------------------CCCCcchhhHHHHHHHHH
Q 045127 350 LQEQWPEVDYDLRTGSVLLT-DNLEPLISRFKIEY---------------------------QHRSTKYVYKFGLFLLEM 401 (508)
Q Consensus 350 LH~~~~iiH~Dlkp~NIll~-~~~~~kl~Dfg~~~---------------------------~~~~~~Dv~SlGvil~el 401 (508)
||++ ||+||||||+||+++ .++.+||+|||.+. .++.++||||+||++|||
T Consensus 157 LH~~-gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el 235 (383)
T 3eb0_A 157 IHSL-GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGEL 235 (383)
T ss_dssp HHTT-TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHH
T ss_pred HHHC-cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHH
Confidence 9999 999999999999998 68999999998742 356789999999999999
Q ss_pred HhCCCCCcccccCcccHHHHHHHhccchhhhh--hhhcc--------cCCcc----hHHHHHHHHHHHHhcCCCCCCCCC
Q 045127 402 ITNRRPLEEFERGEAGFIEYIRMHYPENLQLV--VDERM--------MLTEN----MFDQAEQGLGLGLMCTDQPTGKLP 467 (508)
Q Consensus 402 ltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l--------~~~~~----~~~~~~~l~~l~~~Cl~~dP~~RP 467 (508)
++|+.||......+ .+...+..........+ .++.. ..... .......+.+++.+||+.||.+||
T Consensus 236 l~g~~pf~~~~~~~-~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ 314 (383)
T 3eb0_A 236 ILGKPLFSGETSID-QLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRI 314 (383)
T ss_dssp HHSSCSSCCSSHHH-HHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSC
T ss_pred HhCCCCCCCCChHH-HHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCC
Confidence 99999997543221 12222221111110000 00000 00000 001244578899999999999999
Q ss_pred CHHHHHHH--HHHHHhhC
Q 045127 468 SLVQIYNM--ITRAYKSC 483 (508)
Q Consensus 468 s~~evl~~--L~~i~~~~ 483 (508)
|+.|+++. ++++...+
T Consensus 315 t~~e~l~hp~f~~~~~~~ 332 (383)
T 3eb0_A 315 NPYEAMAHPFFDHLRNSY 332 (383)
T ss_dssp CHHHHHTSGGGHHHHHC-
T ss_pred CHHHHhcCHHHHHHHhhc
Confidence 99999863 56665543
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-36 Score=303.34 Aligned_cols=235 Identities=13% Similarity=0.151 Sum_probs=179.1
Q ss_pred hcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCH-HHHHHHHHHHHHHhhcCCCCccceeeEEec--------
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSR-EIRDEFVEECKLLVQFQHKNLIRVLGWNNS-------- 306 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-------- 306 (508)
.++|+..+.||+|+||.||+|.. .+|+.||+|++...... .....+.+|+.++++++||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 46899999999999999999998 57899999998644322 234577899999999999999999999886
Q ss_pred CCeeEEEEeecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC--
Q 045127 307 RRTRAIVTEWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE-- 382 (508)
Q Consensus 307 ~~~~~lv~e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~-- 382 (508)
.+..++||||+++ +|.+.+. ...+++.++..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||.+
T Consensus 96 ~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~-~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 173 (351)
T 3mi9_A 96 KGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRN-KILHRDMKAANVLITRDGVLKLADFGLARA 173 (351)
T ss_dssp -CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred CceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC-CeeCCCCCHHHEEEcCCCCEEEccchhccc
Confidence 3468999999975 7777665 46799999999999999999999999 9999999999999999999999999863
Q ss_pred ------------------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHH---hccch
Q 045127 383 ------------------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRM---HYPEN 429 (508)
Q Consensus 383 ------------------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~---~~~~~ 429 (508)
..++.++|||||||++|||++|+.||....... ....+.. ..+..
T Consensus 174 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~--~~~~i~~~~~~~~~~ 251 (351)
T 3mi9_A 174 FSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQH--QLALISQLCGSITPE 251 (351)
T ss_dssp CCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH--HHHHHHHHHCCCCTT
T ss_pred ccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHH--HHHHHHHHhCCCChh
Confidence 124678999999999999999999997543221 1111111 11111
Q ss_pred h-hhhhhhc----c----cCCcchHH------HHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 430 L-QLVVDER----M----MLTENMFD------QAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 430 ~-~~~~~~~----l----~~~~~~~~------~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
. ...-... + ........ ....+.+++.+||+.||++|||++|+++.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 252 VWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp TSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 1 0000000 0 00000011 13457789999999999999999999874
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-36 Score=290.94 Aligned_cols=228 Identities=13% Similarity=0.148 Sum_probs=183.4
Q ss_pred HhhcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCC-HHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEE
Q 045127 235 AATNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVS-REIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAI 312 (508)
Q Consensus 235 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 312 (508)
...++|+..+.||+|+||.||+|... +++.||+|++..... ......+.+|++++++++||||+++++++......++
T Consensus 19 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 98 (287)
T 2wei_A 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYI 98 (287)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred HHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEE
Confidence 44578999999999999999999985 689999999864322 2346788999999999999999999999999999999
Q ss_pred EEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCC---CceEEeeccCCC-----
Q 045127 313 VTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDN---LEPLISRFKIEY----- 383 (508)
Q Consensus 313 v~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~---~~~kl~Dfg~~~----- 383 (508)
||||+++++|.+++. ...+++.++..++.|++.||+|||++ |++||||||+||+++.+ +.+||+|||.+.
T Consensus 99 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~-~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~ 177 (287)
T 2wei_A 99 VGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH-NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN 177 (287)
T ss_dssp EECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCC
T ss_pred EEEccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCChhhEEEecCCCcccEEEeccCcceeecCC
Confidence 999999999998876 66899999999999999999999999 99999999999999754 479999998642
Q ss_pred --------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcc
Q 045127 384 --------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTEN 443 (508)
Q Consensus 384 --------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 443 (508)
.++.++||||||+++|+|++|+.||...... .+...+..... .... ..
T Consensus 178 ~~~~~~~~~~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~~-------~~~~---~~ 245 (287)
T 2wei_A 178 TKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEY--DILKRVETGKY-------AFDL---PQ 245 (287)
T ss_dssp SSCSCHHHHHTTCCHHHHTTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHCCC-------CCCS---GG
T ss_pred CccccccCcccccChHHhcCCCCCchhhHhHHHHHHHHHhCCCCCCCCCHH--HHHHHHHcCCC-------CCCc---hh
Confidence 2456889999999999999999999753211 11111111100 0000 00
Q ss_pred hHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 444 MFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 444 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
.......+.+++.+||+.||++|||+.|+++.
T Consensus 246 ~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 277 (287)
T 2wei_A 246 WRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (287)
T ss_dssp GTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred hhhcCHHHHHHHHHHcccChhhCcCHHHHhcC
Confidence 01123467789999999999999999999973
|
| >4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-35 Score=298.96 Aligned_cols=236 Identities=15% Similarity=0.176 Sum_probs=182.5
Q ss_pred hhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCC-CHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCee---
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDV-SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTR--- 310 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~--- 310 (508)
..++|...+.||+|+||.||+|.. .+|+.||||++.... .....+.+.+|+.+++.++||||+++++++......
T Consensus 40 l~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 119 (371)
T 4exu_A 40 LPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF 119 (371)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTC
T ss_pred ccccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccc
Confidence 346889999999999999999997 468999999997543 334567889999999999999999999999876654
Q ss_pred ---EEEEeecCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC-----
Q 045127 311 ---AIVTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE----- 382 (508)
Q Consensus 311 ---~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~----- 382 (508)
++||||+. ++|.+++. ..+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||.+
T Consensus 120 ~~~~lv~e~~~-~~l~~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~ 196 (371)
T 4exu_A 120 YDFYLVMPFMQ-TDLQKIMG-MEFSEEKIQYLVYQMLKGLKYIHSA-GVVHRDLKPGNLAVNEDCELKILDFGLARHADA 196 (371)
T ss_dssp CCCEEEEECCC-EEHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTCCEEECSTTCC-----
T ss_pred eeEEEEEcccc-ccHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHHC-CCcCCCcCHHHeEECCCCCEEEEecCccccccc
Confidence 99999997 68988874 4599999999999999999999999 9999999999999999999999999874
Q ss_pred --------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhcc----------ch-hh
Q 045127 383 --------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYP----------EN-LQ 431 (508)
Q Consensus 383 --------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~----------~~-~~ 431 (508)
..++.++|||||||++|||++|+.||......+ .+......... .. ..
T Consensus 197 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~ 275 (371)
T 4exu_A 197 EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD-QLTQILKVTGVPGTEFVQKLNDKAAK 275 (371)
T ss_dssp ---CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCHHHHTTCSCHHHH
T ss_pred CcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCcHHHHHHhhhhhhh
Confidence 245778999999999999999999997543211 11111111000 00 00
Q ss_pred hhhhhcccCCcch-----HHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 432 LVVDERMMLTENM-----FDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 432 ~~~~~~l~~~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
............. ......+.+++.+||+.||++|||+.|+++.
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 276 SYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp HHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 0000000000000 0124567889999999999999999999875
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-35 Score=292.20 Aligned_cols=223 Identities=15% Similarity=0.215 Sum_probs=175.7
Q ss_pred hhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEec--------
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNS-------- 306 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-------- 306 (508)
..++|+..+.||+|+||.||+|.. .+++.||||++.. .....+.+.+|+.++++++||||+++++++.+
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 81 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH--TEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPM 81 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEE--EHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC--
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEec--cHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhh
Confidence 456789999999999999999997 4789999999954 33456789999999999999999999998764
Q ss_pred -----CCeeEEEEeecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeec
Q 045127 307 -----RRTRAIVTEWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRF 379 (508)
Q Consensus 307 -----~~~~~lv~e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Df 379 (508)
....++||||+++|+|.+++. ...+++..+..++.|++.||+|||++ |++||||||+||+++.++.+||+||
T Consensus 82 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~-~i~H~dlkp~Nil~~~~~~~kl~df 160 (303)
T 1zy4_A 82 TAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQ-GIIHRDLKPMNIFIDESRNVKIGDF 160 (303)
T ss_dssp ----CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTSCEEECCC
T ss_pred cccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhC-CeecccCCHHhEEEcCCCCEEEeeC
Confidence 346799999999999999997 34578899999999999999999999 9999999999999999999999999
Q ss_pred cCCC------------------------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCccc
Q 045127 380 KIEY------------------------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAG 417 (508)
Q Consensus 380 g~~~------------------------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~ 417 (508)
|.+. .++.++|||||||++|||++ ||...... ..
T Consensus 161 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~-~~ 236 (303)
T 1zy4_A 161 GLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMER-VN 236 (303)
T ss_dssp CCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHH-HH
T ss_pred cchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhH-HH
Confidence 8642 34668899999999999998 55421111 01
Q ss_pred HHHHHHHhccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 418 FIEYIRMHYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
....+.... . ...+.+ .......+.+++.+||+.||++|||+.|+++.
T Consensus 237 ~~~~~~~~~-~----~~~~~~-----~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 284 (303)
T 1zy4_A 237 ILKKLRSVS-I----EFPPDF-----DDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS 284 (303)
T ss_dssp HHHHHHSTT-C----CCCTTC-----CTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred HHHhccccc-c----ccCccc-----cccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence 111111000 0 000111 01224457789999999999999999999863
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-35 Score=305.65 Aligned_cols=173 Identities=15% Similarity=0.182 Sum_probs=151.7
Q ss_pred hhcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhc------CCCCccceeeEEecCC
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSREIRDEFVEECKLLVQF------QHKNLIRVLGWNNSRR 308 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l------~h~niv~~~~~~~~~~ 308 (508)
...+|+..+.||+|+||.||+|... +++.||||+++.. ......+.+|+.+++.+ .|+||+++++++....
T Consensus 95 ~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~ 172 (429)
T 3kvw_A 95 VAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE--KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRN 172 (429)
T ss_dssp ETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC--HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETT
T ss_pred ccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc--cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCC
Confidence 4567999999999999999999974 5899999999643 33456778888888877 5779999999999999
Q ss_pred eeEEEEeecCCCCHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCc--eEEeeccCC-
Q 045127 309 TRAIVTEWTNGGNVELWLSE---SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLE--PLISRFKIE- 382 (508)
Q Consensus 309 ~~~lv~e~~~~gsL~~~l~~---~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~--~kl~Dfg~~- 382 (508)
..++||||+. ++|.+++.. ..+++..+..++.||+.||+|||++ +|+||||||+|||++.++. +||+|||++
T Consensus 173 ~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~ 250 (429)
T 3kvw_A 173 HICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN-RIIHCDLKPENILLKQQGRSGIKVIDFGSSC 250 (429)
T ss_dssp EEEEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHH-TEECSCCSGGGEEESSTTSCCEEECCCTTCE
T ss_pred eEEEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHeEEccCCCcceEEeecccce
Confidence 9999999996 689998872 4589999999999999999999999 9999999999999999887 999999874
Q ss_pred -----------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccc
Q 045127 383 -----------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFE 412 (508)
Q Consensus 383 -----------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~ 412 (508)
..++.++|||||||++|||++|+.||....
T Consensus 251 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~ 303 (429)
T 3kvw_A 251 YEHQRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGED 303 (429)
T ss_dssp ETTCCCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ecCCcccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCC
Confidence 246788999999999999999999997543
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-35 Score=294.23 Aligned_cols=234 Identities=14% Similarity=0.161 Sum_probs=181.2
Q ss_pred hhcCCCCCceeeecCCeEEEEEEE--CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCC------CccceeeEEecC
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGIL--RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHK------NLIRVLGWNNSR 307 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~------niv~~~~~~~~~ 307 (508)
..++|+..+.||+|+||.||+|.. .+++.||||+++.. ....+.+.+|+++++.++|+ +++++++++...
T Consensus 12 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~ 89 (339)
T 1z57_A 12 LSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV--DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHH 89 (339)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS--HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEET
T ss_pred ccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC--CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccC
Confidence 346899999999999999999987 36889999999643 33567788999999988655 599999999999
Q ss_pred CeeEEEEeecCCCCHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecC--------------
Q 045127 308 RTRAIVTEWTNGGNVELWLSE---SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTD-------------- 370 (508)
Q Consensus 308 ~~~~lv~e~~~~gsL~~~l~~---~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~-------------- 370 (508)
+..++||||+ +++|.+++.. ..+++..+..++.|++.||+|||++ ||+||||||+||+++.
T Consensus 90 ~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~ 167 (339)
T 1z57_A 90 GHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSN-KLTHTDLKPENILFVQSDYTEAYNPKIKRD 167 (339)
T ss_dssp TEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEESCCCEEEEEC----CE
T ss_pred CcEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHC-CCcCCCCCHHHEEEeccccccccCCccccc
Confidence 9999999999 8899999873 3689999999999999999999999 9999999999999987
Q ss_pred -----CCceEEeeccCC------------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHH
Q 045127 371 -----NLEPLISRFKIE------------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEY 421 (508)
Q Consensus 371 -----~~~~kl~Dfg~~------------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~ 421 (508)
++.+||+|||.+ ..++.++|||||||++|||++|+.||....... ....
T Consensus 168 ~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~--~~~~ 245 (339)
T 1z57_A 168 ERTLINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKE--HLAM 245 (339)
T ss_dssp EEEESCCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHH--HHHH
T ss_pred cccccCCCceEeeCcccccCccccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHH--HHHH
Confidence 668999999874 245778999999999999999999997543211 1111
Q ss_pred HHHh---ccchhhhh---------------------------hhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHH
Q 045127 422 IRMH---YPENLQLV---------------------------VDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQ 471 (508)
Q Consensus 422 ~~~~---~~~~~~~~---------------------------~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~e 471 (508)
+... .+..+... ..+..............+.+++.+||+.||.+|||+.|
T Consensus 246 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e 325 (339)
T 1z57_A 246 MERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLRE 325 (339)
T ss_dssp HHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred HHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHH
Confidence 1111 11110000 00000000111234677889999999999999999999
Q ss_pred HHHH
Q 045127 472 IYNM 475 (508)
Q Consensus 472 vl~~ 475 (508)
+++.
T Consensus 326 ll~h 329 (339)
T 1z57_A 326 ALKH 329 (339)
T ss_dssp HTTS
T ss_pred HhcC
Confidence 9864
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-36 Score=307.50 Aligned_cols=228 Identities=7% Similarity=0.028 Sum_probs=162.2
Q ss_pred hcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCC--HHHHHHHHHHHHHHhhc--CCCCcccee-------eEE
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVS--REIRDEFVEECKLLVQF--QHKNLIRVL-------GWN 304 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l--~h~niv~~~-------~~~ 304 (508)
...|+..+.||+|+||.||+|.+. +++.||||++..... ....+.+.+|+.+++.+ +||||++++ +++
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence 345888999999999999999974 789999999976543 23466778885544444 699988755 444
Q ss_pred ecC-----------------CeeEEEEeecCCCCHHHHhc--cCCCCHHHH------HHHHHHHHHHHHHHhhCCCcccc
Q 045127 305 NSR-----------------RTRAIVTEWTNGGNVELWLS--ESAPSWKHR------LKVLIGVVEAMCYLQEQWPEVDY 359 (508)
Q Consensus 305 ~~~-----------------~~~~lv~e~~~~gsL~~~l~--~~~l~~~~~------~~i~~~i~~~L~~LH~~~~iiH~ 359 (508)
... ...++||||++ |+|.+++. ...+++..+ ..++.||+.||+|||++ ||+||
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~-~ivHr 218 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSK-GLVHG 218 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT-TEEET
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHC-CCccC
Confidence 322 33799999998 89999998 334565666 78889999999999999 99999
Q ss_pred CCCCCCEEecCCCceEEeeccCC--------------------------CCCCCcchhhHHHHHHHHHHhCCCCCccccc
Q 045127 360 DLRTGSVLLTDNLEPLISRFKIE--------------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFER 413 (508)
Q Consensus 360 Dlkp~NIll~~~~~~kl~Dfg~~--------------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~ 413 (508)
||||+|||++.++.+||+|||++ ..++.++|||||||++|||++|+.||.....
T Consensus 219 Dikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~ 298 (371)
T 3q60_A 219 HFTPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTP 298 (371)
T ss_dssp TCSGGGEEECTTSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCT
T ss_pred cCCHHHEEECCCCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCc
Confidence 99999999999999999999873 2456789999999999999999999986532
Q ss_pred CcccHHHHHHHhccc-hhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 414 GEAGFIEYIRMHYPE-NLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 414 ~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
.... .+.. .............. .......+.+++.+||+.||++|||+.|+++
T Consensus 299 ~~~~-------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 299 GIKG-------SWKRPSLRVPGTDSLAFGS-CTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp TCTT-------CCCBCCTTSCCCCSCCCTT-SSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred cccc-------chhhhhhhhccccccchhh-ccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 2110 0000 00000000110000 0112456778999999999999999999975
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-35 Score=296.28 Aligned_cols=227 Identities=12% Similarity=0.165 Sum_probs=177.7
Q ss_pred hcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHH-HHhhcCCCCccceeeEEecCCeeEEEE
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECK-LLVQFQHKNLIRVLGWNNSRRTRAIVT 314 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~lv~ 314 (508)
.++|+..+.||+|+||.||+|.. .+|+.||||+++.........++..|.. +++.++||||+++++++..++..++||
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~ 100 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM 100 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence 46888999999999999999998 4689999999986655555666667776 677789999999999999999999999
Q ss_pred eecCCCCHHHHhc------cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-----
Q 045127 315 EWTNGGNVELWLS------ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY----- 383 (508)
Q Consensus 315 e~~~~gsL~~~l~------~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~----- 383 (508)
||+++ +|.+++. ...+++..+..++.|++.||.|||+..||+||||||+||+++.++.+||+|||.+.
T Consensus 101 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 179 (327)
T 3aln_A 101 ELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDS 179 (327)
T ss_dssp CCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC----
T ss_pred eecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcCCCCEEEccCCCceecccc
Confidence 99985 8887775 57789999999999999999999995599999999999999999999999998742
Q ss_pred -------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcc
Q 045127 384 -------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERM 438 (508)
Q Consensus 384 -------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 438 (508)
.++.++||||||+++|||++|+.||........ ........ ..+.+
T Consensus 180 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~----~~~~~~~~-----~~~~~ 250 (327)
T 3aln_A 180 IAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFD----QLTQVVKG-----DPPQL 250 (327)
T ss_dssp --------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-----------CCCCCS-----CCCCC
T ss_pred cccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHH----HHHHHhcC-----CCCCC
Confidence 245688999999999999999999975321110 01000000 00111
Q ss_pred cCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 439 MLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 439 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
... ........+.+++.+||+.||++|||+.|+++
T Consensus 251 ~~~-~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 251 SNS-EEREFSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp CCC-SSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCc-ccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 000 00112456788999999999999999999976
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-36 Score=304.29 Aligned_cols=236 Identities=11% Similarity=0.106 Sum_probs=182.6
Q ss_pred hhcCCCCCceeeecCCeEEEEEEECCCCEEEEEEecCCCCH----------------HHHHHHHHHHHHHhhcCCCCccc
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSR----------------EIRDEFVEECKLLVQFQHKNLIR 299 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~----------------~~~~~~~~E~~~l~~l~h~niv~ 299 (508)
..++|+..+.||+|+||.||+|.. +++.||+|++...... ...+.+.+|+.++++++||||++
T Consensus 29 ~~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~ 107 (348)
T 2pml_X 29 YINDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLT 107 (348)
T ss_dssp EETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCC
T ss_pred ccCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcce
Confidence 357899999999999999999999 8999999998632111 01278999999999999999999
Q ss_pred eeeEEecCCeeEEEEeecCCCCHHHH------hc---cCCCCHHHHHHHHHHHHHHHHHHhh-CCCccccCCCCCCEEec
Q 045127 300 VLGWNNSRRTRAIVTEWTNGGNVELW------LS---ESAPSWKHRLKVLIGVVEAMCYLQE-QWPEVDYDLRTGSVLLT 369 (508)
Q Consensus 300 ~~~~~~~~~~~~lv~e~~~~gsL~~~------l~---~~~l~~~~~~~i~~~i~~~L~~LH~-~~~iiH~Dlkp~NIll~ 369 (508)
+++++...+..++||||+++|+|.++ +. ...+++..+..++.|++.||+|||+ . |++||||||+||+++
T Consensus 108 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-~i~H~dl~p~Nil~~ 186 (348)
T 2pml_X 108 CEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEK-NICHRDVKPSNILMD 186 (348)
T ss_dssp CSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTS-CEECCCCCGGGEEEC
T ss_pred EEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccC-CEeecCCChHhEEEc
Confidence 99999999999999999999999998 55 4678999999999999999999999 8 999999999999999
Q ss_pred CCCceEEeeccCCCC--------------------------CCC-cchhhHHHHHHHHHHhCCCCCcccccCcccHHHHH
Q 045127 370 DNLEPLISRFKIEYQ--------------------------HRS-TKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYI 422 (508)
Q Consensus 370 ~~~~~kl~Dfg~~~~--------------------------~~~-~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~ 422 (508)
.++.+||+|||.+.. ++. ++||||||+++|||++|+.||....... .+...+
T Consensus 187 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~i 265 (348)
T 2pml_X 187 KNGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLV-ELFNNI 265 (348)
T ss_dssp TTSCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSH-HHHHHH
T ss_pred CCCcEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHH-HHHHHH
Confidence 999999999987521 223 7999999999999999999997543321 111111
Q ss_pred HHhccc---hhhhhhhhccc--CCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 423 RMHYPE---NLQLVVDERMM--LTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 423 ~~~~~~---~~~~~~~~~l~--~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
...... .......+... ...........+.+++.+||+.||.+|||+.|+++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 266 RTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp TSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred hccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 111000 00000000000 00000112456788999999999999999999987
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-35 Score=295.07 Aligned_cols=235 Identities=16% Similarity=0.199 Sum_probs=181.0
Q ss_pred hcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCC-CHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCe-----
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDV-SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRT----- 309 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~----- 309 (508)
.++|...+.||+|+||.||+|.. .+|+.||||++.... .....+.+.+|+.++++++||||+++++++.....
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 46789999999999999999997 468999999996543 33456788999999999999999999999987653
Q ss_pred -eEEEEeecCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC------
Q 045127 310 -RAIVTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE------ 382 (508)
Q Consensus 310 -~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~------ 382 (508)
.++||||++ ++|.+++. ..+++..+..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||.+
T Consensus 103 ~~~lv~e~~~-~~l~~~~~-~~~~~~~~~~i~~qi~~al~~LH~~-~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 179 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMG-LKFSEEKIQYLVYQMLKGLKYIHSA-GVVHRDLKPGNLAVNEDCELKILDFGLARHADAE 179 (353)
T ss_dssp CCEEEEECCS-EEGGGTTT-SCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSSCCGGGEEECTTCCEEECSTTCTTC----
T ss_pred eEEEEecccc-CCHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEeECCCCcEEEeecccccCCCCC
Confidence 499999997 58888875 4599999999999999999999999 9999999999999999999999999874
Q ss_pred -------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhc-c---------ch-hhh
Q 045127 383 -------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHY-P---------EN-LQL 432 (508)
Q Consensus 383 -------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~-~---------~~-~~~ 432 (508)
..++.++|||||||++|||++|+.||....... .+........ + .. ...
T Consensus 180 ~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~ 258 (353)
T 3coi_A 180 MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD-QLTQILKVTGVPGTEFVQKLNDKAAKS 258 (353)
T ss_dssp ----CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHH-HHHHHHHHHCBCCHHHHTTCSCHHHHH
T ss_pred ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCHHHHHHHhhHHHHH
Confidence 235678999999999999999999997543211 1111111100 0 00 000
Q ss_pred hhhhccc-----CCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 433 VVDERMM-----LTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 433 ~~~~~l~-----~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
.+..... ...........+.+++.+|++.||++|||+.|+++.
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 259 YIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp HHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 0000000 000001224567889999999999999999999864
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-35 Score=297.14 Aligned_cols=247 Identities=11% Similarity=0.109 Sum_probs=173.8
Q ss_pred HHHHHHhhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCC
Q 045127 230 TWMLKAATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRR 308 (508)
Q Consensus 230 ~~~l~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 308 (508)
..+.....++|+..+.||+|+||.||+|.. .+++.||||++..... ....+.+|++.++.++||||+++++++....
T Consensus 15 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~ 92 (360)
T 3e3p_A 15 DERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPR--FRNRELQIMQDLAVLHHPNIVQLQSYFYTLG 92 (360)
T ss_dssp SHHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTT--CCCHHHHHHHHHHHHCCTTBCCEEEEEEEEC
T ss_pred hhhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCcc--ccHHHHHHHHHHHhcCCCCcccHHHhhhccc
Confidence 355677889999999999999999999998 4689999999864322 2345677888889999999999999986533
Q ss_pred e-------eEEEEeecCCCCHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHh--hCCCccccCCCCCCEEecC-CCc
Q 045127 309 T-------RAIVTEWTNGGNVELWLS-----ESAPSWKHRLKVLIGVVEAMCYLQ--EQWPEVDYDLRTGSVLLTD-NLE 373 (508)
Q Consensus 309 ~-------~~lv~e~~~~gsL~~~l~-----~~~l~~~~~~~i~~~i~~~L~~LH--~~~~iiH~Dlkp~NIll~~-~~~ 373 (508)
. .++||||+++ +|...+. ...+++..+..++.|++.||.||| +. ||+||||||+||+++. ++.
T Consensus 93 ~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~-~ivH~Dlkp~NIll~~~~~~ 170 (360)
T 3e3p_A 93 ERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV-NVCHRDIKPHNVLVNEADGT 170 (360)
T ss_dssp SSCTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT-CCBCSCCCGGGEEEETTTTE
T ss_pred cccccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC-CeecCcCCHHHEEEeCCCCc
Confidence 2 7899999987 4443332 567899999999999999999999 99 9999999999999996 899
Q ss_pred eEEeeccCCC---------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhc
Q 045127 374 PLISRFKIEY---------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHY 426 (508)
Q Consensus 374 ~kl~Dfg~~~---------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~ 426 (508)
+||+|||.+. .++.++|||||||++|||++|+.||....... .+........
T Consensus 171 ~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~-~~~~~~~~~~ 249 (360)
T 3e3p_A 171 LKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAG-QLHEIVRVLG 249 (360)
T ss_dssp EEECCCTTCBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHC
T ss_pred EEEeeCCCceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHH-HHHHHHHHcC
Confidence 9999998742 25678999999999999999999997543221 1222221111
Q ss_pred cc--hhhhhhhhcccC--------C-------cchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH--HHHHHh
Q 045127 427 PE--NLQLVVDERMML--------T-------ENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM--ITRAYK 481 (508)
Q Consensus 427 ~~--~~~~~~~~~l~~--------~-------~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~--L~~i~~ 481 (508)
.. ......++.... . .........+.+++.+||+.||.+|||+.|+++. +.++..
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~ 323 (360)
T 3e3p_A 250 CPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELHD 323 (360)
T ss_dssp CCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGGC
T ss_pred CCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccccCC
Confidence 10 111111111000 0 0000135678899999999999999999999974 555443
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-35 Score=312.57 Aligned_cols=225 Identities=13% Similarity=0.153 Sum_probs=180.8
Q ss_pred hcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCH--HHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEE
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSR--EIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIV 313 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 313 (508)
.++|+..+.||+|+||.||+|+.. +|+.||+|++...... .....+.+|+.++++++||||+++++++.+....|+|
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence 467888999999999999999984 6899999999643211 2346788999999999999999999999999999999
Q ss_pred EeecCCCCHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-----
Q 045127 314 TEWTNGGNVELWLSE-----SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY----- 383 (508)
Q Consensus 314 ~e~~~~gsL~~~l~~-----~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~----- 383 (508)
|||+++|+|.+++.. ..+++..+..++.||+.||+|||++ ||+||||||+|||++.++.+||+|||++.
T Consensus 264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~-gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~ 342 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR-NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAG 342 (543)
T ss_dssp ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc-CCcccCCChHHEEEeCCCCEEEeecceeeeccCC
Confidence 999999999999862 3689999999999999999999999 99999999999999999999999998742
Q ss_pred ----------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCC
Q 045127 384 ----------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLT 441 (508)
Q Consensus 384 ----------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 441 (508)
.++.++|||||||++|||++|+.||....... ........ +........
T Consensus 343 ~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~-~~~~~~~~--------i~~~~~~~p 413 (543)
T 3c4z_A 343 QTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV-ENKELKQR--------VLEQAVTYP 413 (543)
T ss_dssp CCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCC-CHHHHHHH--------HHHCCCCCC
T ss_pred CcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccch-hHHHHHHH--------HhhcccCCC
Confidence 35677899999999999999999997543211 11111111 111111111
Q ss_pred cchHHHHHHHHHHHHhcCCCCCCCCCCH-----HHHHH
Q 045127 442 ENMFDQAEQGLGLGLMCTDQPTGKLPSL-----VQIYN 474 (508)
Q Consensus 442 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~-----~evl~ 474 (508)
. .....+.+++.+||+.||++||++ +++++
T Consensus 414 ~---~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~ 448 (543)
T 3c4z_A 414 D---KFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRT 448 (543)
T ss_dssp T---TSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred c---ccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence 1 123456788899999999999965 67764
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-35 Score=303.21 Aligned_cols=232 Identities=9% Similarity=0.072 Sum_probs=173.8
Q ss_pred hcCCCCCceeeecCCeEEEEEEECCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCC------ee
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRR------TR 310 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------~~ 310 (508)
..+|+..+.||+|+||.||+|+...+..||+|++..... ...+|+++++.++||||+++++++.... ..
T Consensus 39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~-----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~ 113 (394)
T 4e7w_A 39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR-----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFL 113 (394)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT-----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEE
T ss_pred cceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc-----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEE
Confidence 457899999999999999999997766799988854322 1237999999999999999999986433 37
Q ss_pred EEEEeecCCCCHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEec-CCCceEEeeccCCC--
Q 045127 311 AIVTEWTNGGNVELWLS----ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLT-DNLEPLISRFKIEY-- 383 (508)
Q Consensus 311 ~lv~e~~~~gsL~~~l~----~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~-~~~~~kl~Dfg~~~-- 383 (508)
++||||++++.+..... ...+++..+..++.|++.||+|||++ ||+||||||+||+++ .++.+||+|||.+.
T Consensus 114 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~ 192 (394)
T 4e7w_A 114 NLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI-GICHRDIKPQNLLLDPPSGVLKLIDFGSAKIL 192 (394)
T ss_dssp EEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred EEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC-CccCCCCCHHHEEEcCCCCcEEEeeCCCcccc
Confidence 89999998754443332 57899999999999999999999999 999999999999999 79999999998741
Q ss_pred -------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccch--hhhhhhh
Q 045127 384 -------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPEN--LQLVVDE 436 (508)
Q Consensus 384 -------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 436 (508)
.++.++|||||||++|||++|+.||....... .+...+....... .....++
T Consensus 193 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~-~l~~i~~~~g~p~~~~~~~~~~ 271 (394)
T 4e7w_A 193 IAGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGID-QLVEIIKVLGTPSREQIKTMNP 271 (394)
T ss_dssp CTTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCHHHHHHHCG
T ss_pred cCCCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCHHHHHhhCh
Confidence 35778999999999999999999997543221 1222222111110 0000111
Q ss_pred cc-----cC---Ccc----hHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 437 RM-----ML---TEN----MFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 437 ~l-----~~---~~~----~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
.. .. ... .......+.+++.+||+.||++|||+.|+++.
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 322 (394)
T 4e7w_A 272 NYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH 322 (394)
T ss_dssp GGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred hhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence 10 00 000 00124578899999999999999999999874
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-35 Score=291.48 Aligned_cols=225 Identities=14% Similarity=0.182 Sum_probs=169.9
Q ss_pred hhcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCHHHHHH-HHHHHHHHhhcCCCCccceeeEEecCCeeEEE
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSREIRDE-FVEECKLLVQFQHKNLIRVLGWNNSRRTRAIV 313 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~-~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 313 (508)
..++|+..+.||+|+||.||+|... +|+.||||++..........+ +.++..+++.++||||+++++++..++..++|
T Consensus 23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv 102 (318)
T 2dyl_A 23 EINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIA 102 (318)
T ss_dssp CGGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hhccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEE
Confidence 4567888999999999999999984 689999999976655444334 44455577888999999999999999999999
Q ss_pred EeecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhh-CCCccccCCCCCCEEecCCCceEEeeccCCC-------
Q 045127 314 TEWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQE-QWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------- 383 (508)
Q Consensus 314 ~e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~-~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------- 383 (508)
|||+ ++.+..+.. ...+++..+..++.|++.||+|||+ . |++||||||+||+++.++.+||+|||.+.
T Consensus 103 ~e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~-~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~ 180 (318)
T 2dyl_A 103 MELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKH-GVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKA 180 (318)
T ss_dssp ECCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHH-CCCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred Eecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhC-CEEeCCCCHHHEEECCCCCEEEEECCCchhccCCcc
Confidence 9999 556666655 5789999999999999999999998 6 99999999999999999999999998742
Q ss_pred ------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhccc
Q 045127 384 ------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMM 439 (508)
Q Consensus 384 ------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 439 (508)
.++.++||||||+++|||++|+.||.........+.... ... .+.+.
T Consensus 181 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~-~~~--------~~~~~ 251 (318)
T 2dyl_A 181 KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVL-QEE--------PPLLP 251 (318)
T ss_dssp ------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHH-HSC--------CCCCC
T ss_pred ccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHh-ccC--------CCCCC
Confidence 245578999999999999999999975332211111111 100 01111
Q ss_pred CCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 440 LTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 440 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
... .....+.+++.+||+.||.+|||++|+++
T Consensus 252 ~~~---~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 252 GHM---GFSGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp SSS---CCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred ccC---CCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 100 12345778899999999999999999986
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-35 Score=294.22 Aligned_cols=238 Identities=14% Similarity=0.180 Sum_probs=177.1
Q ss_pred HHhhcCCCCCceeeecCCeEEEEEEE--CCCCEEEEEEecCCCCH-HHHHHHHHHHHHHhhc---CCCCccceeeEEe--
Q 045127 234 KAATNGFSKKNLVGKNEGAAIYKGIL--RDGTRVKIEIYKGDVSR-EIRDEFVEECKLLVQF---QHKNLIRVLGWNN-- 305 (508)
Q Consensus 234 ~~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l---~h~niv~~~~~~~-- 305 (508)
.++.++|+..+.||+|+||.||+|.. .+++.||+|+++..... .....+.+|+.+++.+ +||||+++++++.
T Consensus 7 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~ 86 (326)
T 1blx_A 7 CRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVS 86 (326)
T ss_dssp CCGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEE
T ss_pred cCchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeec
Confidence 35668899999999999999999998 46789999998643221 1223456777777666 8999999999987
Q ss_pred ---cCCeeEEEEeecCCCCHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeec
Q 045127 306 ---SRRTRAIVTEWTNGGNVELWLS---ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRF 379 (508)
Q Consensus 306 ---~~~~~~lv~e~~~~gsL~~~l~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Df 379 (508)
.....++||||++ |+|.+++. ...+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+||
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-gi~H~dlkp~Nili~~~~~~kl~Df 164 (326)
T 1blx_A 87 RTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH-RVVHRDLKPQNILVTSSGQIKLADF 164 (326)
T ss_dssp ECSSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTCCEEECSC
T ss_pred ccCCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCCHHHeEEcCCCCEEEecC
Confidence 4567899999997 69999987 34589999999999999999999999 9999999999999999999999999
Q ss_pred cCCC--------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccc---hh
Q 045127 380 KIEY--------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPE---NL 430 (508)
Q Consensus 380 g~~~--------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~---~~ 430 (508)
|.+. .++.++||||||+++|||++|+.||....... .+.......... ..
T Consensus 165 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~ 243 (326)
T 1blx_A 165 GLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD-QLGKILDVIGLPGEEDW 243 (326)
T ss_dssp CSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCGGGS
T ss_pred cccccccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHH-HHHHHHHHcCCCCcccC
Confidence 8742 34678999999999999999999997543211 111111110000 00
Q ss_pred hhhh---hhccc----C--CcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 431 QLVV---DERMM----L--TENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 431 ~~~~---~~~l~----~--~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
.... ...+. . ..........+.+++.+||+.||++|||+.|+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 244 PRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp CTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 0000 00000 0 0000112456778999999999999999999985
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-35 Score=301.09 Aligned_cols=233 Identities=12% Similarity=0.106 Sum_probs=166.4
Q ss_pred cCCCC-CceeeecCCeEEEEEEEC---CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEe--cCCeeE
Q 045127 238 NGFSK-KNLVGKNEGAAIYKGILR---DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNN--SRRTRA 311 (508)
Q Consensus 238 ~~~~~-~~~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~--~~~~~~ 311 (508)
+.|+. .++||+|+||.||+|.+. +++.||+|++..... ...+.+|+.++++++||||+++++++. .....+
T Consensus 20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~---~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 96 (405)
T 3rgf_A 20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI---SMSACREIALLRELKHPNVISLQKVFLSHADRKVW 96 (405)
T ss_dssp HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC---CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEE
T ss_pred hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC---CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEE
Confidence 34554 468999999999999975 578999999965433 246789999999999999999999995 467889
Q ss_pred EEEeecCCCCHHHHhc----------cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEe----cCCCceEEe
Q 045127 312 IVTEWTNGGNVELWLS----------ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLL----TDNLEPLIS 377 (508)
Q Consensus 312 lv~e~~~~gsL~~~l~----------~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll----~~~~~~kl~ 377 (508)
+||||+++ +|.+++. ...+++..+..++.||+.||+|||++ ||+||||||+|||+ +.++.+||+
T Consensus 97 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~-~ivH~Dlkp~NIll~~~~~~~~~~kl~ 174 (405)
T 3rgf_A 97 LLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN-WVLHRDLKPANILVMGEGPERGRVKIA 174 (405)
T ss_dssp EEEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECCSSTTTTCEEEC
T ss_pred EEEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC-CEeCCCcCHHHeEEecCCCCCCcEEEE
Confidence 99999964 8887775 12489999999999999999999999 99999999999999 678999999
Q ss_pred eccCCC-------------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCc--------ccH
Q 045127 378 RFKIEY-------------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGE--------AGF 418 (508)
Q Consensus 378 Dfg~~~-------------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~--------~~~ 418 (508)
|||++. .++.++|||||||++|||++|+.||.....+. ..+
T Consensus 175 Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l 254 (405)
T 3rgf_A 175 DMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQL 254 (405)
T ss_dssp CTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHH
T ss_pred ECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHH
Confidence 998752 24567899999999999999999997543210 111
Q ss_pred HHHHHHhc-cc-h-hhhh-------------hhhcccCCcchH-------HHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 419 IEYIRMHY-PE-N-LQLV-------------VDERMMLTENMF-------DQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 419 ~~~~~~~~-~~-~-~~~~-------------~~~~l~~~~~~~-------~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
...+.... +. . ...+ ............ .....+.+++.+||+.||.+|||++|+++.
T Consensus 255 ~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~h 334 (405)
T 3rgf_A 255 DRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQD 334 (405)
T ss_dssp HHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 11111100 00 0 0000 000000000000 003457789999999999999999999975
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-35 Score=321.41 Aligned_cols=222 Identities=16% Similarity=0.196 Sum_probs=181.4
Q ss_pred hhcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCC--CHHHHHHHHHHHHHHhhc-CCCCccceeeEEecCCeeE
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDV--SREIRDEFVEECKLLVQF-QHKNLIRVLGWNNSRRTRA 311 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 311 (508)
..++|+..+.||+|+||.||+|... +++.||||+++... .....+.+..|..++..+ +||+|+++++++.+.+..|
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 4578999999999999999999974 68899999996431 112346678899999988 6999999999999999999
Q ss_pred EEEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-------
Q 045127 312 IVTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------- 383 (508)
Q Consensus 312 lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------- 383 (508)
+||||+++|+|.+++. ...+++..+..++.||+.||+|||++ ||+||||||+|||++.++.+||+|||++.
T Consensus 419 lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~-gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~ 497 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSK-GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV 497 (674)
T ss_dssp EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT-SEECCCCCSTTEEECSSSCEEECCCTTCEECCCTTC
T ss_pred EEEeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC-CeEeccCChhhEEEcCCCcEEEeecceeeccccCCc
Confidence 9999999999999998 57899999999999999999999999 99999999999999999999999999742
Q ss_pred --------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcc
Q 045127 384 --------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTEN 443 (508)
Q Consensus 384 --------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 443 (508)
.++.++|||||||++|||++|+.||...... ..... +....+....
T Consensus 498 ~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~-----~~~~~--------i~~~~~~~p~- 563 (674)
T 3pfq_A 498 TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED-----ELFQS--------IMEHNVAYPK- 563 (674)
T ss_dssp CBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHHHH--------HHSSCCCCCT-
T ss_pred ccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHH-----HHHHH--------HHhCCCCCCc-
Confidence 3567899999999999999999999753221 11111 1111111111
Q ss_pred hHHHHHHHHHHHHhcCCCCCCCCCCH-----HHHHH
Q 045127 444 MFDQAEQGLGLGLMCTDQPTGKLPSL-----VQIYN 474 (508)
Q Consensus 444 ~~~~~~~l~~l~~~Cl~~dP~~RPs~-----~evl~ 474 (508)
.....+.+++.+||+.||++||++ +||++
T Consensus 564 --~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 564 --SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp --TSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred --cCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence 124567788999999999999997 77765
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-35 Score=292.78 Aligned_cols=221 Identities=17% Similarity=0.196 Sum_probs=170.7
Q ss_pred HHHHhhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCH-----HHHHHHHHHHHHHhhc----CCCCcccee
Q 045127 232 MLKAATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSR-----EIRDEFVEECKLLVQF----QHKNLIRVL 301 (508)
Q Consensus 232 ~l~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~-----~~~~~~~~E~~~l~~l----~h~niv~~~ 301 (508)
+.....++|+..+.||+|+||.||+|.. .+++.||+|++...... .....+.+|+.++.++ +||||++++
T Consensus 25 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~ 104 (312)
T 2iwi_A 25 DREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLL 104 (312)
T ss_dssp --------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEE
T ss_pred chhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEE
Confidence 3445668899999999999999999987 56899999999644321 1234466799999998 899999999
Q ss_pred eEEecCCeeEEEEee-cCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEec-CCCceEEee
Q 045127 302 GWNNSRRTRAIVTEW-TNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLT-DNLEPLISR 378 (508)
Q Consensus 302 ~~~~~~~~~~lv~e~-~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~-~~~~~kl~D 378 (508)
+++...+..++|||| +.+++|.+++. ...+++..+..++.|++.||+|||++ ||+||||||+||+++ .++.+||+|
T Consensus 105 ~~~~~~~~~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~~kl~d 183 (312)
T 2iwi_A 105 DWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSR-GVVHRDIKDENILIDLRRGCAKLID 183 (312)
T ss_dssp EEC-----CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHH-TEECCCCSGGGEEEETTTTEEEECC
T ss_pred EEEecCCeEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCChhhEEEeCCCCeEEEEE
Confidence 999998999999999 78999999998 56799999999999999999999999 999999999999999 889999999
Q ss_pred ccCCCC-------------------------C-CCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhh
Q 045127 379 FKIEYQ-------------------------H-RSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQL 432 (508)
Q Consensus 379 fg~~~~-------------------------~-~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (508)
||.+.. + +.++||||||+++|||++|+.||.... ...
T Consensus 184 fg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-------~~~---------- 246 (312)
T 2iwi_A 184 FGSGALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ-------EIL---------- 246 (312)
T ss_dssp CSSCEECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-------HHH----------
T ss_pred cchhhhcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH-------HHh----------
Confidence 987421 1 237899999999999999999996421 001
Q ss_pred hhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 433 VVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 433 ~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
........ .....+.+++.+||+.||++|||++|+++.
T Consensus 247 --~~~~~~~~---~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 284 (312)
T 2iwi_A 247 --EAELHFPA---HVSPDCCALIRRCLAPKPSSRPSLEEILLD 284 (312)
T ss_dssp --HTCCCCCT---TSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred --hhccCCcc---cCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 11111001 113456788999999999999999999873
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-35 Score=303.17 Aligned_cols=234 Identities=12% Similarity=0.105 Sum_probs=174.5
Q ss_pred cCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecC------Cee
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSR------RTR 310 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------~~~ 310 (508)
.+|+..+.||+|+||.||+|++. +|+.||||++..... ...+|++++++++||||+++++++... ...
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~-----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~ 128 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYL 128 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT-----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch-----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeE
Confidence 46888999999999999999984 689999999864322 234799999999999999999988532 235
Q ss_pred EEEEeecCCCCHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCC-CceEEeeccCCC-
Q 045127 311 AIVTEWTNGGNVELWLS-----ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDN-LEPLISRFKIEY- 383 (508)
Q Consensus 311 ~lv~e~~~~gsL~~~l~-----~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~-~~~kl~Dfg~~~- 383 (508)
++||||+++ ++.+.+. ...+++..+..++.||++||+|||++ ||+||||||+|||++.+ +.+||+|||++.
T Consensus 129 ~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~ 206 (420)
T 1j1b_A 129 NLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF-GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 206 (420)
T ss_dssp EEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT-TEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred Eeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCChhhEEEeCCCCeEEeccchhhhh
Confidence 789999976 6665554 57799999999999999999999999 99999999999999955 678999998742
Q ss_pred --------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccch---hhhhh
Q 045127 384 --------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPEN---LQLVV 434 (508)
Q Consensus 384 --------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 434 (508)
.++.++|||||||++|||++|+.||...... ..+...+...-... +.. .
T Consensus 207 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~-~~l~~i~~~lg~p~~~~~~~-~ 284 (420)
T 1j1b_A 207 LVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV-DQLVEIIKVLGTPTREQIRE-M 284 (420)
T ss_dssp CCTTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCSCCHHHHHH-H
T ss_pred cccCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCHHHHHh-h
Confidence 3567889999999999999999999754321 12222222111110 111 1
Q ss_pred hhcc--------cCCcc----hHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH--HHHHH
Q 045127 435 DERM--------MLTEN----MFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM--ITRAY 480 (508)
Q Consensus 435 ~~~l--------~~~~~----~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~--L~~i~ 480 (508)
++.. ..... .......+.+++.+||+.||.+|||+.|+++. ++++.
T Consensus 285 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~~~ 344 (420)
T 1j1b_A 285 NPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 344 (420)
T ss_dssp CSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGG
T ss_pred ChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhcccc
Confidence 1111 00000 00113568889999999999999999999864 44443
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-34 Score=292.09 Aligned_cols=175 Identities=19% Similarity=0.194 Sum_probs=151.1
Q ss_pred HHHhhcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcC-CC-----CccceeeEEe
Q 045127 233 LKAATNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQ-HK-----NLIRVLGWNN 305 (508)
Q Consensus 233 l~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~-----niv~~~~~~~ 305 (508)
.....++|+..+.||+|+||.||+|... +++.||||+++.. ......+..|+.+++.++ |+ +|+++++++.
T Consensus 49 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~ 126 (382)
T 2vx3_A 49 GEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK--KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFM 126 (382)
T ss_dssp TCEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS--HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEE
T ss_pred CCEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc--HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeec
Confidence 3456789999999999999999999974 6889999999643 334567788999988885 55 4999999999
Q ss_pred cCCeeEEEEeecCCCCHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHhh--CCCccccCCCCCCEEec--CCCceEEee
Q 045127 306 SRRTRAIVTEWTNGGNVELWLSE---SAPSWKHRLKVLIGVVEAMCYLQE--QWPEVDYDLRTGSVLLT--DNLEPLISR 378 (508)
Q Consensus 306 ~~~~~~lv~e~~~~gsL~~~l~~---~~l~~~~~~~i~~~i~~~L~~LH~--~~~iiH~Dlkp~NIll~--~~~~~kl~D 378 (508)
..+..++||||++ |+|.+++.. ..+++..+..++.|++.||+|||+ . ||+||||||+|||++ .++.+||+|
T Consensus 127 ~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~-~ivHrDlkp~NIll~~~~~~~~kL~D 204 (382)
T 2vx3_A 127 FRNHLCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPEL-SIIHCDLKPENILLCNPKRSAIKIVD 204 (382)
T ss_dssp ETTEEEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTT-CEECCCCSGGGEEESSTTSCCEEECC
T ss_pred cCCceEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCC-CEEcCCCCcccEEEecCCCCcEEEEe
Confidence 9999999999996 599999873 468999999999999999999994 6 999999999999995 578899999
Q ss_pred ccCC------------------------CCCCCcchhhHHHHHHHHHHhCCCCCccc
Q 045127 379 FKIE------------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEF 411 (508)
Q Consensus 379 fg~~------------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~ 411 (508)
||.+ ..++.++|||||||++|||++|+.||...
T Consensus 205 FG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 205 FGSSCQLGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp CTTCEETTCCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ccCceecccccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 9875 24577899999999999999999999754
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-34 Score=290.00 Aligned_cols=234 Identities=15% Similarity=0.150 Sum_probs=178.3
Q ss_pred hhcCCCCCceeeecCCeEEEEEEEC-CC-CEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCC------ccceeeEEecC
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGILR-DG-TRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKN------LIRVLGWNNSR 307 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~-~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~~~~~~~~~ 307 (508)
..++|+..+.||+|+||.||+|... ++ +.||+|+++.. ....+.+.+|+.++++++|++ ++.+++++...
T Consensus 17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 94 (355)
T 2eu9_A 17 LQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV--GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFH 94 (355)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC--HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEET
T ss_pred ecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc--ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeC
Confidence 3468999999999999999999974 34 68999999643 345677889999999987655 89999999999
Q ss_pred CeeEEEEeecCCCCHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEe----------------
Q 045127 308 RTRAIVTEWTNGGNVELWLS---ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLL---------------- 368 (508)
Q Consensus 308 ~~~~lv~e~~~~gsL~~~l~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll---------------- 368 (508)
...++||||+ ++++.+++. ...+++.++..++.||+.||+|||++ ||+||||||+||++
T Consensus 95 ~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~-~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~ 172 (355)
T 2eu9_A 95 GHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHEN-QLTHTDLKPENILFVNSEFETLYNEHKSCE 172 (355)
T ss_dssp TEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTT-TEECCCCCGGGEEESCCCEEEEECCC-CCC
T ss_pred CeEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEEeccccccccccccccc
Confidence 9999999999 566776665 24699999999999999999999999 99999999999999
Q ss_pred ---cCCCceEEeeccCC------------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHH
Q 045127 369 ---TDNLEPLISRFKIE------------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEY 421 (508)
Q Consensus 369 ---~~~~~~kl~Dfg~~------------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~ 421 (508)
+.++.+||+|||.+ ..++.++|||||||++|||++|+.||....... ....
T Consensus 173 ~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~--~~~~ 250 (355)
T 2eu9_A 173 EKSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENRE--HLVM 250 (355)
T ss_dssp EEEESCCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH--HHHH
T ss_pred ccccCCCcEEEeecCccccccccccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH--HHHH
Confidence 56789999999874 245678999999999999999999997543221 1111
Q ss_pred HHHhc---cchhhhh-----------------------hh----hcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHH
Q 045127 422 IRMHY---PENLQLV-----------------------VD----ERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQ 471 (508)
Q Consensus 422 ~~~~~---~~~~~~~-----------------------~~----~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~e 471 (508)
+.... +..+... .. +..............+.+++.+||+.||++|||+.|
T Consensus 251 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e 330 (355)
T 2eu9_A 251 MEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAE 330 (355)
T ss_dssp HHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred HHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHH
Confidence 11111 1110000 00 000000011233567889999999999999999999
Q ss_pred HHHH
Q 045127 472 IYNM 475 (508)
Q Consensus 472 vl~~ 475 (508)
+++.
T Consensus 331 ~l~h 334 (355)
T 2eu9_A 331 ALLH 334 (355)
T ss_dssp HTTS
T ss_pred HhcC
Confidence 9853
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-35 Score=296.12 Aligned_cols=233 Identities=15% Similarity=0.166 Sum_probs=177.6
Q ss_pred hcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcC-----------CCCccceeeEE
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQ-----------HKNLIRVLGWN 304 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~~~~~~ 304 (508)
.++|+..+.||+|+||.||+|.. .+++.||||++... ......+.+|+.++++++ ||||+++++++
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~ 95 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD--KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHF 95 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC--HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC--ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHh
Confidence 46799999999999999999997 57899999999642 334677889999998886 89999999998
Q ss_pred ecCC----eeEEEEeecCCCCHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEec------CC
Q 045127 305 NSRR----TRAIVTEWTNGGNVELWLS---ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLT------DN 371 (508)
Q Consensus 305 ~~~~----~~~lv~e~~~~gsL~~~l~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~------~~ 371 (508)
.... ..++||||+ +++|.+++. ...+++..+..++.||+.||+|||+++||+||||||+||+++ ..
T Consensus 96 ~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~~~ 174 (373)
T 1q8y_A 96 NHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENL 174 (373)
T ss_dssp EEEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTE
T ss_pred hccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCCCcCc
Confidence 7543 789999999 889999987 356999999999999999999999955999999999999994 44
Q ss_pred CceEEeeccCC------------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCc-----ccHHHHH
Q 045127 372 LEPLISRFKIE------------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGE-----AGFIEYI 422 (508)
Q Consensus 372 ~~~kl~Dfg~~------------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~-----~~~~~~~ 422 (508)
+.+||+|||.+ ..++.++|||||||++|||++|+.||....... ..+....
T Consensus 175 ~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 254 (373)
T 1q8y_A 175 IQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQII 254 (373)
T ss_dssp EEEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHH
T ss_pred ceEEEcccccccccCCCCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHH
Confidence 58999999874 235778999999999999999999997543211 1111111
Q ss_pred HHh--ccch----------------------------hhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHH
Q 045127 423 RMH--YPEN----------------------------LQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQI 472 (508)
Q Consensus 423 ~~~--~~~~----------------------------~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev 472 (508)
... .+.. ......... .........+.+++.+||+.||++|||++|+
T Consensus 255 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~L~~dP~~Rpt~~el 331 (373)
T 1q8y_A 255 ELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKY---KFSKDEAKEISDFLSPMLQLDPRKRADAGGL 331 (373)
T ss_dssp HHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTT---CCCHHHHHHHHHHHGGGGCSSTTTCBCHHHH
T ss_pred HhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcc---cCCcchHHHHHHHHHHHhccCccccCCHHHH
Confidence 100 0000 000011111 1123456788899999999999999999999
Q ss_pred HHH
Q 045127 473 YNM 475 (508)
Q Consensus 473 l~~ 475 (508)
++.
T Consensus 332 l~h 334 (373)
T 1q8y_A 332 VNH 334 (373)
T ss_dssp HTC
T ss_pred hhC
Confidence 874
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-35 Score=294.47 Aligned_cols=221 Identities=19% Similarity=0.254 Sum_probs=178.8
Q ss_pred HHHHhhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCH-----HHHHHHHHHHHHHhhcC--CCCccceeeE
Q 045127 232 MLKAATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSR-----EIRDEFVEECKLLVQFQ--HKNLIRVLGW 303 (508)
Q Consensus 232 ~l~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~-----~~~~~~~~E~~~l~~l~--h~niv~~~~~ 303 (508)
+.....++|+..+.||+|+||.||+|.. .+++.||||++...... .....+.+|+.++++++ ||||++++++
T Consensus 37 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~ 116 (320)
T 3a99_A 37 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDW 116 (320)
T ss_dssp ---CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEE
T ss_pred ccCCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEE
Confidence 3345567899999999999999999997 56899999999643221 12345678999999996 5999999999
Q ss_pred EecCCeeEEEEeecCC-CCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEec-CCCceEEeecc
Q 045127 304 NNSRRTRAIVTEWTNG-GNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLT-DNLEPLISRFK 380 (508)
Q Consensus 304 ~~~~~~~~lv~e~~~~-gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~-~~~~~kl~Dfg 380 (508)
+..++..++|||++.+ ++|.+++. ...+++..+..++.|++.||+|||+. ||+||||||+||+++ .++.+||+|||
T Consensus 117 ~~~~~~~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~-~ivH~Dlkp~NIll~~~~~~~kL~Dfg 195 (320)
T 3a99_A 117 FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFG 195 (320)
T ss_dssp EECSSEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEEETTTTEEEECCCT
T ss_pred EecCCcEEEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC-CcEeCCCCHHHEEEeCCCCCEEEeeCc
Confidence 9999999999999986 89999987 67899999999999999999999999 999999999999999 78999999999
Q ss_pred CCCC--------------------------CCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhh
Q 045127 381 IEYQ--------------------------HRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVV 434 (508)
Q Consensus 381 ~~~~--------------------------~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (508)
.+.. .+.++||||||+++|||++|+.||.... ....
T Consensus 196 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~-------~~~~----------- 257 (320)
T 3a99_A 196 SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-------EIIR----------- 257 (320)
T ss_dssp TCEECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-------HHHH-----------
T ss_pred cccccccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh-------hhhc-----------
Confidence 7421 1356799999999999999999996421 0010
Q ss_pred hhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 435 DERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 435 ~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
....... .....+.+++.+||+.||++|||++|+++.
T Consensus 258 -~~~~~~~---~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 294 (320)
T 3a99_A 258 -GQVFFRQ---RVSSECQHLIRWCLALRPSDRPTFEEIQNH 294 (320)
T ss_dssp -CCCCCSS---CCCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred -ccccccc---cCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000000 113457789999999999999999999873
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-35 Score=290.98 Aligned_cols=226 Identities=12% Similarity=0.158 Sum_probs=165.4
Q ss_pred hhcCCCCCc-eeeecCCeEEEEEEEC-CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEec----CCe
Q 045127 236 ATNGFSKKN-LVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNS----RRT 309 (508)
Q Consensus 236 ~~~~~~~~~-~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~----~~~ 309 (508)
..++|...+ .||+|+||.||+|... +++.||||++... .... ......++.++||||+++++++.. +..
T Consensus 26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~---~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 100 (336)
T 3fhr_A 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS--PKAR---QEVDHHWQASGGPHIVCILDVYENMHHGKRC 100 (336)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS--HHHH---HHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc--HHHH---HHHHHHHHhcCCCChHHHHHHHhhccCCCce
Confidence 457888854 6999999999999985 6899999999643 2112 222234566789999999999875 445
Q ss_pred eEEEEeecCCCCHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecC---CCceEEeeccCCC
Q 045127 310 RAIVTEWTNGGNVELWLSE---SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTD---NLEPLISRFKIEY 383 (508)
Q Consensus 310 ~~lv~e~~~~gsL~~~l~~---~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~---~~~~kl~Dfg~~~ 383 (508)
.++||||+++|+|.+++.. ..+++.++..++.|++.||+|||++ ||+||||||+||+++. ++.+||+|||.+.
T Consensus 101 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~-~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~ 179 (336)
T 3fhr_A 101 LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH-NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK 179 (336)
T ss_dssp EEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEESCSSTTCCEEECCCTTCE
T ss_pred EEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEEecCCCceEEEeccccce
Confidence 7999999999999999983 3699999999999999999999999 9999999999999986 4559999999753
Q ss_pred C-------------------------CCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcc
Q 045127 384 Q-------------------------HRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERM 438 (508)
Q Consensus 384 ~-------------------------~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 438 (508)
. ++.++||||||+++|+|++|+.||......... ................+..
T Consensus 180 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 257 (336)
T 3fhr_A 180 ETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAIS--PGMKRRIRLGQYGFPNPEW 257 (336)
T ss_dssp EC----------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-----------------------CCCTTTS
T ss_pred eccccccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhh--hhHHHhhhccccccCchhh
Confidence 1 234689999999999999999999754322110 0000000000000000000
Q ss_pred cCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 439 MLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 439 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
......+.+++.+||+.||++|||+.|+++.
T Consensus 258 ------~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 288 (336)
T 3fhr_A 258 ------SEVSEDAKQLIRLLLKTDPTERLTITQFMNH 288 (336)
T ss_dssp ------TTCCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred ------ccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 1124567789999999999999999999984
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-34 Score=315.24 Aligned_cols=219 Identities=14% Similarity=0.173 Sum_probs=178.1
Q ss_pred hcCCCCCceeeecCCeEEEEEEEC--CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCe-----
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGILR--DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRT----- 309 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~----- 309 (508)
.++|++.+.||+|+||.||+|.+. +++.||||++...........+.+|+.++++++||||+++++++...+.
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 158 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV 158 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence 478999999999999999999984 5899999999766555667789999999999999999999999986554
Q ss_pred eEEEEeecCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCCC-----
Q 045127 310 RAIVTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEYQ----- 384 (508)
Q Consensus 310 ~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~----- 384 (508)
.|+||||+++++|.+++.. .+++.++..|+.||+.||.|||++ ||+||||||+|||++.+ .+||+|||.+..
T Consensus 159 ~~lv~E~~~g~~L~~~~~~-~l~~~~~~~~~~qi~~aL~~lH~~-giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~~~ 235 (681)
T 2pzi_A 159 GYIVMEYVGGQSLKRSKGQ-KLPVAEAIAYLLEILPALSYLHSI-GLVYNDLKPENIMLTEE-QLKLIDLGAVSRINSFG 235 (681)
T ss_dssp EEEEEECCCCEECC----C-CCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECSS-CEEECCCTTCEETTCCS
T ss_pred eEEEEEeCCCCcHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHHC-CCeecccChHHeEEeCC-cEEEEecccchhcccCC
Confidence 6999999999999988765 899999999999999999999999 99999999999999975 899999997521
Q ss_pred -----------------CCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHH
Q 045127 385 -----------------HRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQ 447 (508)
Q Consensus 385 -----------------~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 447 (508)
.+.++|||||||++|||++|..||........ +. .......
T Consensus 236 ~~~gt~~y~aPE~~~~~~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~----------~~------------~~~~~~~ 293 (681)
T 2pzi_A 236 YLYGTPGFQAPEIVRTGPTVATDIYTVGRTLAALTLDLPTRNGRYVDGL----------PE------------DDPVLKT 293 (681)
T ss_dssp CCCCCTTTSCTTHHHHCSCHHHHHHHHHHHHHHHHSCCCEETTEECSSC----------CT------------TCHHHHH
T ss_pred ccCCCccccCHHHHcCCCCCceehhhhHHHHHHHHhCCCCCcccccccc----------cc------------ccccccc
Confidence 24578999999999999999988764322110 00 0001122
Q ss_pred HHHHHHHHHhcCCCCCCCCC-CHHHHHHHHHHHH
Q 045127 448 AEQGLGLGLMCTDQPTGKLP-SLVQIYNMITRAY 480 (508)
Q Consensus 448 ~~~l~~l~~~Cl~~dP~~RP-s~~evl~~L~~i~ 480 (508)
...+.+++.+||+.||++|| +++++...|..+.
T Consensus 294 ~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~ 327 (681)
T 2pzi_A 294 YDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVL 327 (681)
T ss_dssp CHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred CHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHH
Confidence 35677899999999999999 5667777776654
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-34 Score=297.52 Aligned_cols=218 Identities=17% Similarity=0.195 Sum_probs=167.5
Q ss_pred CCCCceeeecCCeEEEEEEECCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhc-CCCCccceeeEEecCCeeEEEEeecC
Q 045127 240 FSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQF-QHKNLIRVLGWNNSRRTRAIVTEWTN 318 (508)
Q Consensus 240 ~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~ 318 (508)
|...+.||+|+||+||.+...+|+.||||++... ..+.+.+|+.+++++ +||||+++++++.++...++||||+.
T Consensus 17 ~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~----~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~ 92 (434)
T 2rio_A 17 VVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID----FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN 92 (434)
T ss_dssp EEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG----GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS
T ss_pred eeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH----HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC
Confidence 3446889999999998776667999999998643 235678999999886 89999999999999999999999996
Q ss_pred CCCHHHHhccCCC--------CHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCC-------------CceEEe
Q 045127 319 GGNVELWLSESAP--------SWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDN-------------LEPLIS 377 (508)
Q Consensus 319 ~gsL~~~l~~~~l--------~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~-------------~~~kl~ 377 (508)
|+|.+++..... ++..+..++.||+.||+|||++ ||+||||||+||+++.+ +.+||+
T Consensus 93 -gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~ 170 (434)
T 2rio_A 93 -LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL-KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILIS 170 (434)
T ss_dssp -EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEEC
T ss_pred -CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC-CccccCCChHhEEEecCcccccccccCCCceEEEEc
Confidence 699999983322 2234578999999999999999 99999999999999754 489999
Q ss_pred eccCC--------------------------------------CCCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccH
Q 045127 378 RFKIE--------------------------------------YQHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGF 418 (508)
Q Consensus 378 Dfg~~--------------------------------------~~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~ 418 (508)
|||++ ..++.++|||||||++|||+| |+.||.......
T Consensus 171 DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~--- 247 (434)
T 2rio_A 171 DFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE--- 247 (434)
T ss_dssp CCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH---
T ss_pred ccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH---
Confidence 99863 234667999999999999999 999997432211
Q ss_pred HHHHHHhccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 419 IEYIRMHYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
.......... +.. ...........+.+++.+||+.||++|||+.||++
T Consensus 248 ~~i~~~~~~~-------~~~-~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 248 SNIIRGIFSL-------DEM-KCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp HHHHHTCCCC-------CCC-TTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHhcCCCCc-------ccc-cccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 1111111100 000 01111234567889999999999999999999986
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-34 Score=294.61 Aligned_cols=220 Identities=15% Similarity=0.161 Sum_probs=168.1
Q ss_pred hhcCCCCCceeeecCCeEEEEEEECCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhc-CCCCccceeeEEecCCeeEEEE
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQF-QHKNLIRVLGWNNSRRTRAIVT 314 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~ 314 (508)
...+|+..+.||+|+||+||.....+++.||||++..... ..+.+|+.+++++ +||||+++++++.+....++||
T Consensus 22 ~~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~----~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~ 97 (432)
T 3p23_A 22 GKISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF----SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAI 97 (432)
T ss_dssp TTEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE----EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ccEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH----HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEE
Confidence 3456888899999999997655556799999999965332 2356899999999 7999999999999999999999
Q ss_pred eecCCCCHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecC-----CCceEEeeccCCC----
Q 045127 315 EWTNGGNVELWLSE--SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTD-----NLEPLISRFKIEY---- 383 (508)
Q Consensus 315 e~~~~gsL~~~l~~--~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~-----~~~~kl~Dfg~~~---- 383 (508)
||+. |+|.+++.. ...++..+..++.||+.||+|||++ ||+||||||+||+++. ...+||+|||++.
T Consensus 98 E~~~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~ 175 (432)
T 3p23_A 98 ELCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSL-NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAV 175 (432)
T ss_dssp ECCS-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHT-TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC--
T ss_pred ECCC-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHC-cCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccC
Confidence 9996 599999973 3455566789999999999999999 9999999999999953 3468899998631
Q ss_pred -----------------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhh
Q 045127 384 -----------------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLV 433 (508)
Q Consensus 384 -----------------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (508)
.++.++|||||||++|||++ |+.||....... ........
T Consensus 176 ~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~------~~~~~~~~---- 245 (432)
T 3p23_A 176 GRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQ------ANILLGAC---- 245 (432)
T ss_dssp ----------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHH------HHHHTTCC----
T ss_pred CCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHH------HHHHhccC----
Confidence 22347899999999999999 999986432111 00000000
Q ss_pred hhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 434 VDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 434 ~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
..............+.+++.+||+.||++|||+.|+++
T Consensus 246 ---~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 246 ---SLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp ---CCTTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ---CccccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 00000011123445678999999999999999999984
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-34 Score=309.05 Aligned_cols=242 Identities=14% Similarity=0.139 Sum_probs=181.3
Q ss_pred hhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEec------CC
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNS------RR 308 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~------~~ 308 (508)
..++|+..+.||+|+||.||+|.. .+|+.||||+++........+.+.+|++++++++||||+++++++.. ++
T Consensus 12 ~~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~ 91 (676)
T 3qa8_A 12 TCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPND 91 (676)
T ss_dssp -----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTS
T ss_pred CCCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCC
Confidence 347899999999999999999997 46899999999876666678889999999999999999999998765 66
Q ss_pred eeEEEEeecCCCCHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCc---eEEeeccC
Q 045127 309 TRAIVTEWTNGGNVELWLSE----SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLE---PLISRFKI 381 (508)
Q Consensus 309 ~~~lv~e~~~~gsL~~~l~~----~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~---~kl~Dfg~ 381 (508)
..++||||+++|+|.+++.. ..+++..+..++.|++.||+|||+. ||+||||||+||+++.++. +||+|||.
T Consensus 92 ~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~-gIVHrDLKP~NILl~~~g~~~~vKL~DFG~ 170 (676)
T 3qa8_A 92 LPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN-RIIHRDLKPENIVLQPGPQRLIHKIIDLGY 170 (676)
T ss_dssp SCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT-TBCCCCCCSTTEEEECCSSSCEEEECSCCC
T ss_pred eEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC-CCccCCCCHHHeEeecCCCceeEEEccccc
Confidence 77999999999999999973 2589999999999999999999999 9999999999999997665 99999987
Q ss_pred CC--------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccch-----h
Q 045127 382 EY--------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPEN-----L 430 (508)
Q Consensus 382 ~~--------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~-----~ 430 (508)
+. .++.++|||||||++|||++|+.||..... ...|........ .
T Consensus 171 a~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~----~~~~~~~i~~~~~~~~~~ 246 (676)
T 3qa8_A 171 AKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQ----PVQWHGKVREKSNEHIVV 246 (676)
T ss_dssp CCBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCH----HHHSSTTCC------CCS
T ss_pred ccccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccc----hhhhhhhhhcccchhhhh
Confidence 42 346789999999999999999999964211 111111000000 0
Q ss_pred hhhhh------hcccCC-cchHHHHHHHHHHHHhcCCCCCCCCCCHHH-----HHHHHHHHHhh
Q 045127 431 QLVVD------ERMMLT-ENMFDQAEQGLGLGLMCTDQPTGKLPSLVQ-----IYNMITRAYKS 482 (508)
Q Consensus 431 ~~~~~------~~l~~~-~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~e-----vl~~L~~i~~~ 482 (508)
.+... ..+... .........+.+++.+||+.||++|||+.| ..+.++++...
T Consensus 247 ~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~~ 310 (676)
T 3qa8_A 247 YDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILSL 310 (676)
T ss_dssp CCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHCC
T ss_pred hhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHhc
Confidence 00000 000000 011123567889999999999999999988 45666666543
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-33 Score=285.27 Aligned_cols=217 Identities=12% Similarity=0.071 Sum_probs=160.4
Q ss_pred hhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCH--HHHHHHHHHHHHHhhcCC-CCccc------------
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSR--EIRDEFVEECKLLVQFQH-KNLIR------------ 299 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h-~niv~------------ 299 (508)
.+..|...+.||+|+||.||+|.+ .+|+.||||+++..... ...+.+.+|+.+++.++| +|...
T Consensus 76 ~~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~ 155 (413)
T 3dzo_A 76 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD 155 (413)
T ss_dssp CCEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCE
T ss_pred CceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchh
Confidence 344577789999999999999996 57999999999733322 235779999999999987 32211
Q ss_pred ---------eeeEEec-----CCeeEEEEeecCCCCHHHHhc--------cCCCCHHHHHHHHHHHHHHHHHHhhCCCcc
Q 045127 300 ---------VLGWNNS-----RRTRAIVTEWTNGGNVELWLS--------ESAPSWKHRLKVLIGVVEAMCYLQEQWPEV 357 (508)
Q Consensus 300 ---------~~~~~~~-----~~~~~lv~e~~~~gsL~~~l~--------~~~l~~~~~~~i~~~i~~~L~~LH~~~~ii 357 (508)
+..++.. ....+++|+++ +++|.++++ ...+++..+..++.|+++||+|||++ ||+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ii 233 (413)
T 3dzo_A 156 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY-GLV 233 (413)
T ss_dssp EEECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT-TEE
T ss_pred hcccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC-Ccc
Confidence 1111111 12356677765 679999985 34577889999999999999999999 999
Q ss_pred ccCCCCCCEEecCCCceEEeeccCCC---------------------------------CCCCcchhhHHHHHHHHHHhC
Q 045127 358 DYDLRTGSVLLTDNLEPLISRFKIEY---------------------------------QHRSTKYVYKFGLFLLEMITN 404 (508)
Q Consensus 358 H~Dlkp~NIll~~~~~~kl~Dfg~~~---------------------------------~~~~~~Dv~SlGvil~elltg 404 (508)
||||||+|||++.++.+||+|||++. .++.++|||||||++|||++|
T Consensus 234 HrDiKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~g~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg 313 (413)
T 3dzo_A 234 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCA 313 (413)
T ss_dssp CSCCCGGGEEECTTCCEEECCGGGCEETTEEECCCCCTTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHS
T ss_pred cCCcccceEEEecCCeEEEEeccceeecCCccccCCCCceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHC
Confidence 99999999999999999999999842 134489999999999999999
Q ss_pred CCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 405 RRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 405 ~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
+.||........ ...++.. .. .....+.+++.+||+.||++|||+.|+++
T Consensus 314 ~~Pf~~~~~~~~-------------~~~~~~~----~~---~~~~~~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 314 DLPNTDDAALGG-------------SEWIFRS----CK---NIPQPVRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp SCCCCTTGGGSC-------------SGGGGSS----CC---CCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCCCCcchhhh-------------HHHHHhh----cc---cCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 999975432110 1111111 11 11355778899999999999999777743
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A | Back alignment and structure |
|---|
Probab=99.97 E-value=5.1e-33 Score=278.01 Aligned_cols=221 Identities=14% Similarity=0.101 Sum_probs=165.9
Q ss_pred hcCCCCCceeeecCCeEEEEEEECCCCEEEEEEecCCC-------CHHHHHHHHHHHHHHhhcC---------CCCccce
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDV-------SREIRDEFVEECKLLVQFQ---------HKNLIRV 300 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~---------h~niv~~ 300 (508)
.++|+..+.||+|+||.||+|++ +|+.||||++.... .....+.+.+|+.++++++ ||||+++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 46788999999999999999998 68999999997442 1223477889999888885 7777776
Q ss_pred eeEEe-----------------c-------------CCeeEEEEeecCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHH
Q 045127 301 LGWNN-----------------S-------------RRTRAIVTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYL 350 (508)
Q Consensus 301 ~~~~~-----------------~-------------~~~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~L 350 (508)
.+.+. + ....++||||+++|++.+.+.+..+++..+..++.||+.||+||
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~~~~~~~~~~~i~~qi~~aL~~l 177 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASLAVA 177 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTTTCCCHHHHHHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 66532 2 67889999999999777777667889999999999999999999
Q ss_pred h-hCCCccccCCCCCCEEecCCC--------------------ceEEeeccCCC---------------------CCCCc
Q 045127 351 Q-EQWPEVDYDLRTGSVLLTDNL--------------------EPLISRFKIEY---------------------QHRST 388 (508)
Q Consensus 351 H-~~~~iiH~Dlkp~NIll~~~~--------------------~~kl~Dfg~~~---------------------~~~~~ 388 (508)
| ++ ||+||||||+|||++.++ .+||+|||++. ..+.+
T Consensus 178 H~~~-~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~~~~gt~~y~aPE~~~g~~~~~ 256 (336)
T 2vuw_A 178 EASL-RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDGIVVFCDVSMDEDLFTGDGDYQ 256 (336)
T ss_dssp HHHH-CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETTEEECCCCTTCSGGGCCCSSHH
T ss_pred HHhC-CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCCcEEEeecccChhhhcCCCccc
Confidence 9 89 999999999999999887 89999999853 22557
Q ss_pred chhhHHHHH-HHHHHhCCCCCcccccCcccHHHHHHHhccchhhhh-hhhcccCCcchHHHHHHHHHHHHhcCCCCCCCC
Q 045127 389 KYVYKFGLF-LLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLV-VDERMMLTENMFDQAEQGLGLGLMCTDQPTGKL 466 (508)
Q Consensus 389 ~Dv~SlGvi-l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~R 466 (508)
+||||+|++ .+++++|..||... .|..... +.+... ..+..............+.+++.+||+.|
T Consensus 257 ~Diwsl~~~~~~~~~~g~~p~~~~--------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~d---- 323 (336)
T 2vuw_A 257 FDIYRLMKKENNNRWGEYHPYSNV--------LWLHYLT-DKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLNFS---- 323 (336)
T ss_dssp HHHHHHHHHHHTTCTTSCCTHHHH--------HHHHHHH-HHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGGGSS----
T ss_pred eehhhhhCCCCcccccccCCCcch--------hhhhHHH-HhhhhhhccCcccchhhhhhcCHHHHHHHHHHhccC----
Confidence 899998777 77888899998531 1110000 000000 00000111112345677889999999976
Q ss_pred CCHHHHH
Q 045127 467 PSLVQIY 473 (508)
Q Consensus 467 Ps~~evl 473 (508)
|++|++
T Consensus 324 -sa~e~l 329 (336)
T 2vuw_A 324 -SATDLL 329 (336)
T ss_dssp -SHHHHH
T ss_pred -CHHHHH
Confidence 999887
|
| >4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=8.2e-26 Score=240.65 Aligned_cols=161 Identities=18% Similarity=0.151 Sum_probs=123.6
Q ss_pred eeeecCCeEEEEEE-ECCCCEEEEEEecCCC---------CHHHHHHHHHHHHHHhhc-CCCCccceeeEEecCCeeEEE
Q 045127 245 LVGKNEGAAIYKGI-LRDGTRVKIEIYKGDV---------SREIRDEFVEECKLLVQF-QHKNLIRVLGWNNSRRTRAIV 313 (508)
Q Consensus 245 ~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~---------~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv 313 (508)
..+.|++|.+..++ .-.|+.+++|++.... .....++|.+|+++|+++ .|+||++++++++++...|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 35566666666554 2348899999996432 122356799999999999 699999999999999999999
Q ss_pred EeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCCCCC-----C
Q 045127 314 TEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEYQHR-----S 387 (508)
Q Consensus 314 ~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~-----~ 387 (508)
|||++|++|.+++. .+.++.. +|+.||+.||+|+|++ |||||||||+|||+++++.+||+|||+++... .
T Consensus 321 MEyv~G~~L~d~i~~~~~l~~~---~I~~QIl~AL~ylH~~-GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~~~~ 396 (569)
T 4azs_A 321 MEKLPGRLLSDMLAAGEEIDRE---KILGSLLRSLAALEKQ-GFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCSWP 396 (569)
T ss_dssp EECCCSEEHHHHHHTTCCCCHH---HHHHHHHHHHHHHHHT-TCEESCCCGGGEEECTTSCEEECCCTTEESCC---CCS
T ss_pred EecCCCCcHHHHHHhCCCCCHH---HHHHHHHHHHHHHHHC-CceeccCchHhEEECCCCCEEEeecccCeeCCCCCccc
Confidence 99999999999998 5566654 5889999999999999 99999999999999999999999999976443 3
Q ss_pred cchhhHHHHHHHHHHhCCCCCc
Q 045127 388 TKYVYKFGLFLLEMITNRRPLE 409 (508)
Q Consensus 388 ~~Dv~SlGvil~elltg~~P~~ 409 (508)
.+++|+.|++..|+++|+.++.
T Consensus 397 ~t~vGTp~YmAPE~l~g~~~~~ 418 (569)
T 4azs_A 397 TNLVQSFFVFVNELFAENKSWN 418 (569)
T ss_dssp HHHHHHHHHHHHHHC-------
T ss_pred cCceechhhccHHHhCCCCCCc
Confidence 5678999999999998876543
|
| >3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=8.9e-23 Score=216.03 Aligned_cols=137 Identities=15% Similarity=0.152 Sum_probs=109.8
Q ss_pred CCCceeeecCCeEEEEEEECCCCEEEEEEecCCCC--H-----HHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEE
Q 045127 241 SKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVS--R-----EIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIV 313 (508)
Q Consensus 241 ~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~--~-----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 313 (508)
...+.||+|+||.||+|.. .++.+++|....... . ...+++.+|++++++++||||+++..++...+..++|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 3457899999999999965 478889988753321 1 1245689999999999999999776666677788999
Q ss_pred EeecCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCCCCCCc
Q 045127 314 TEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEYQHRST 388 (508)
Q Consensus 314 ~e~~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 388 (508)
|||+++++|.+++.. +..++.|+++||+|||++ +|+||||||+|||++. .+||+|||+++.....
T Consensus 418 mE~~~ggsL~~~l~~-------~~~i~~qi~~aL~~LH~~-gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~ 482 (540)
T 3en9_A 418 MSYINGKLAKDVIED-------NLDIAYKIGEIVGKLHKN-DVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLD 482 (540)
T ss_dssp EECCCSEEHHHHSTT-------CTHHHHHHHHHHHHHHHT-TEECTTCCTTSEEESS--SEEECCCTTCEECCCH
T ss_pred EECCCCCCHHHHHHH-------HHHHHHHHHHHHHHHHHC-cCccCCCCHHHEEECC--eEEEEECccCEECCCc
Confidence 999999999999875 678999999999999999 9999999999999998 9999999999877654
|
| >1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=2.4e-22 Score=195.37 Aligned_cols=144 Identities=15% Similarity=0.080 Sum_probs=116.1
Q ss_pred HHHHHHhhcCCCCCceeeecCCeEEEEEEECCCCEEEEEEecCCCCH-----------------HHHHHHHHHHHHHhhc
Q 045127 230 TWMLKAATNGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSR-----------------EIRDEFVEECKLLVQF 292 (508)
Q Consensus 230 ~~~l~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~-----------------~~~~~~~~E~~~l~~l 292 (508)
+..+......|+..+.||+|+||.||+|.+.+|+.||+|+++..... .....+.+|+.+++++
T Consensus 82 l~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l 161 (282)
T 1zar_A 82 LHRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKL 161 (282)
T ss_dssp HHHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhc
Confidence 34445555667777999999999999999977999999999643211 1356789999999999
Q ss_pred CCCCccceeeEEecCCeeEEEEeecCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCC
Q 045127 293 QHKNLIRVLGWNNSRRTRAIVTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNL 372 (508)
Q Consensus 293 ~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~ 372 (508)
+ | +++.+++.. +..++||||+++|+|.+ +.. .....++.|++.||+|||+. ||+||||||+|||++ ++
T Consensus 162 ~--~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~-----~~~~~i~~qi~~~l~~lH~~-giiHrDlkp~NILl~-~~ 229 (282)
T 1zar_A 162 Q--G-LAVPKVYAW-EGNAVLMELIDAKELYR-VRV-----ENPDEVLDMILEEVAKFYHR-GIVHGDLSQYNVLVS-EE 229 (282)
T ss_dssp T--T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC-----SCHHHHHHHHHHHHHHHHHT-TEECSCCSTTSEEEE-TT
T ss_pred c--C-CCcCeEEec-cceEEEEEecCCCcHHH-cch-----hhHHHHHHHHHHHHHHHHHC-CCEeCCCCHHHEEEE-CC
Confidence 9 4 666665543 45699999999999998 431 23457999999999999999 999999999999999 99
Q ss_pred ceEEeeccCCCCC
Q 045127 373 EPLISRFKIEYQH 385 (508)
Q Consensus 373 ~~kl~Dfg~~~~~ 385 (508)
.+||+|||.+...
T Consensus 230 ~vkl~DFG~a~~~ 242 (282)
T 1zar_A 230 GIWIIDFPQSVEV 242 (282)
T ss_dssp EEEECCCTTCEET
T ss_pred cEEEEECCCCeEC
Confidence 9999999998644
|
| >1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=4.4e-20 Score=177.08 Aligned_cols=138 Identities=14% Similarity=0.115 Sum_probs=108.1
Q ss_pred CCCCceeeecCCeEEEEEEE-CCCCE--EEEEEecCCCCH-----------------------HHHHHHHHHHHHHhhcC
Q 045127 240 FSKKNLVGKNEGAAIYKGIL-RDGTR--VKIEIYKGDVSR-----------------------EIRDEFVEECKLLVQFQ 293 (508)
Q Consensus 240 ~~~~~~lg~G~~g~V~~~~~-~~~~~--vavK~~~~~~~~-----------------------~~~~~~~~E~~~l~~l~ 293 (508)
|+..+.||+|+||.||+|.. .+|+. ||||+++..... .....+.+|+..+.++.
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 56778999999999999998 67888 999997543111 11246889999999998
Q ss_pred CCCc--cceeeEEecCCeeEEEEeecCC-C----CHHHHhccCCCCHHHHHHHHHHHHHHHHHHh-hCCCccccCCCCCC
Q 045127 294 HKNL--IRVLGWNNSRRTRAIVTEWTNG-G----NVELWLSESAPSWKHRLKVLIGVVEAMCYLQ-EQWPEVDYDLRTGS 365 (508)
Q Consensus 294 h~ni--v~~~~~~~~~~~~~lv~e~~~~-g----sL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH-~~~~iiH~Dlkp~N 365 (508)
|+++ +.++++ ...++||||+.+ | +|.++... .++..+..++.|++.||.||| +. ||+||||||+|
T Consensus 129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~--~~~~~~~~i~~qi~~~l~~lH~~~-givHrDlkp~N 201 (258)
T 1zth_A 129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE--LKELDVEGIFNDVVENVKRLYQEA-ELVHADLSEYN 201 (258)
T ss_dssp HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG--GGGSCHHHHHHHHHHHHHHHHHTS-CEECSSCSTTS
T ss_pred hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc--cChHHHHHHHHHHHHHHHHHHHHC-CEEeCCCCHHH
Confidence 8764 444432 246899999942 3 77776532 234567889999999999999 88 99999999999
Q ss_pred EEecCCCceEEeeccCCCCCC
Q 045127 366 VLLTDNLEPLISRFKIEYQHR 386 (508)
Q Consensus 366 Ill~~~~~~kl~Dfg~~~~~~ 386 (508)
||++. .++|+|||++...+
T Consensus 202 ILl~~--~~~liDFG~a~~~~ 220 (258)
T 1zth_A 202 IMYID--KVYFIDMGQAVTLR 220 (258)
T ss_dssp EEESS--SEEECCCTTCEETT
T ss_pred EEEcC--cEEEEECcccccCC
Confidence 99998 99999999986543
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A | Back alignment and structure |
|---|
Probab=99.74 E-value=3.4e-18 Score=159.84 Aligned_cols=157 Identities=15% Similarity=0.145 Sum_probs=134.2
Q ss_pred CCcCCcCCCCCccccccCCCCCCcchhcccccccccccccCCCCCcccCCCccccCCCCCcCeEeCccCcccccCCcc--
Q 045127 17 STIMNNCIHNPSLKYCNSSSPMDLNEIFKSTIVASHLCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCPLG-- 94 (508)
Q Consensus 17 ~~~~~~c~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~-- 94 (508)
..+|..|.+....+.|+......+|.... ..+..|....|.++.+++..|..+++|+.|+|++|+|++..|..
T Consensus 3 ~~CP~~C~C~~~~v~c~~~~l~~iP~~l~-----~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~ 77 (220)
T 2v9t_B 3 LHCPAACTCSNNIVDCRGKGLTEIPTNLP-----ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQ 77 (220)
T ss_dssp CCSCTTSEEETTEEECTTSCCSSCCSSCC-----TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTT
T ss_pred CCCCCCCEECCCEEEcCCCCcCcCCCccC-----cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhh
Confidence 45788888888889998877777776443 35566777778899999878999999999999999999877754
Q ss_pred ----ccEEEcccCcccCCCChhhhccCCccccccccccccCcCCchhhhcCCccceeccccccccCccccccccccccCC
Q 045127 95 ----IMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNS 170 (508)
Q Consensus 95 ----l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~~ 170 (508)
+++|+|++|+|++..+..|.++++|++|+|++|+|++..| ..|..+++|+.|+|++|+|+++++..+..++++..
T Consensus 78 ~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 156 (220)
T 2v9t_B 78 GLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRV-DAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQT 156 (220)
T ss_dssp TCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCT-TTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCE
T ss_pred CCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCH-HHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCE
Confidence 4999999999997766778999999999999999995445 89999999999999999999966666888999999
Q ss_pred CCccCCCCC
Q 045127 171 SSFLHSGLF 179 (508)
Q Consensus 171 ~~~~~n~~~ 179 (508)
+++.+|++.
T Consensus 157 L~L~~N~~~ 165 (220)
T 2v9t_B 157 MHLAQNPFI 165 (220)
T ss_dssp EECCSSCEE
T ss_pred EEeCCCCcC
Confidence 999999874
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.72 E-value=1.1e-17 Score=156.46 Aligned_cols=157 Identities=14% Similarity=0.106 Sum_probs=131.2
Q ss_pred CCcCCcCCCCCccccccCCCCCCcchhcccccccccccccCCCCCcccCCC-ccccCCCCCcCeEeCccCcccccCCcc-
Q 045127 17 STIMNNCIHNPSLKYCNSSSPMDLNEIFKSTIVASHLCNESKNPNCVESFP-KIDLRSRPKITPLYLSFNFFWKYCPLG- 94 (508)
Q Consensus 17 ~~~~~~c~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~L~~~~n~~~~~p-~~~~~~l~~L~~L~L~~N~l~~~~p~~- 94 (508)
..+|..|.+......|+......+|..+.. .+..|....|.++.++ ...|+.+++|+.|+|++|+|++..|..
T Consensus 3 ~~CP~~C~C~~~~l~~s~n~l~~iP~~~~~-----~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~ 77 (220)
T 2v70_A 3 LACPEKCRCEGTTVDCSNQKLNKIPEHIPQ-----YTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAF 77 (220)
T ss_dssp -CCCTTCEEETTEEECCSSCCSSCCSCCCT-----TCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTT
T ss_pred CCCCCCCEECCCEeEeCCCCcccCccCCCC-----CCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHh
Confidence 356788888877888887766677764432 2345666678888884 445899999999999999999866633
Q ss_pred -----ccEEEcccCcccCCCChhhhccCCccccccccccccCcCCchhhhcCCccceeccccccccCccccccccccccC
Q 045127 95 -----IMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFN 169 (508)
Q Consensus 95 -----l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~ 169 (508)
+++|+|++|++++..|..|.++++|++|+|++|+|++..| ..|..+++|+.|+|++|+|+++.+..+..+++|.
T Consensus 78 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 156 (220)
T 2v70_A 78 EGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGN-DSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLS 156 (220)
T ss_dssp TTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCT-TSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCC
T ss_pred CCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECH-hHcCCCccCCEEECCCCcCCEECHHHhcCCCCCC
Confidence 4999999999998888889999999999999999995555 8999999999999999999996677888899999
Q ss_pred CCCccCCCCC
Q 045127 170 SSSFLHSGLF 179 (508)
Q Consensus 170 ~~~~~~n~~~ 179 (508)
.+++.+|++.
T Consensus 157 ~L~L~~N~l~ 166 (220)
T 2v70_A 157 TLNLLANPFN 166 (220)
T ss_dssp EEECCSCCEE
T ss_pred EEEecCcCCc
Confidence 9999999874
|
| >4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A | Back alignment and structure |
|---|
Probab=99.70 E-value=2.9e-17 Score=164.23 Aligned_cols=140 Identities=12% Similarity=0.100 Sum_probs=103.0
Q ss_pred cCCCCCceeeecCCeEEEEEEECCCCEEEEEEecCCCC----------------HH-----HHHHHHHHHHHHhhcCCCC
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVS----------------RE-----IRDEFVEECKLLVQFQHKN 296 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~----------------~~-----~~~~~~~E~~~l~~l~h~n 296 (508)
.-|++.+.||+|++|.||+|..++|+.||||+++.... .. ......+|...|.++.+.+
T Consensus 95 ~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~g 174 (397)
T 4gyi_A 95 DVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEG 174 (397)
T ss_dssp SCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 34888999999999999999998999999999753210 00 0112345777777775554
Q ss_pred ccceeeEEecCCeeEEEEeecCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCC----
Q 045127 297 LIRVLGWNNSRRTRAIVTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNL---- 372 (508)
Q Consensus 297 iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~---- 372 (508)
+....-+... ..++||||++|++|.++... +....++.|++.+|.|||+. |||||||||.|||+++++
T Consensus 175 v~vp~p~~~~--~~~LVME~i~G~~L~~l~~~-----~~~~~l~~qll~~l~~lH~~-gIVHrDLKp~NILl~~dgd~~d 246 (397)
T 4gyi_A 175 FPVPEPIAQS--RHTIVMSLVDALPMRQVSSV-----PDPASLYADLIALILRLAKH-GLIHGDFNEFNILIREEKDAED 246 (397)
T ss_dssp CSCCCEEEEE--TTEEEEECCSCEEGGGCCCC-----SCHHHHHHHHHHHHHHHHHT-TEECSCCSTTSEEEEEEECSSC
T ss_pred CCCCeeeecc--CceEEEEecCCccHhhhccc-----HHHHHHHHHHHHHHHHHHHC-CCcCCCCCHHHEEEeCCCCccc
Confidence 4322222222 23799999999988765431 23457889999999999999 999999999999998776
Q ss_pred ------ceEEeeccCCCCC
Q 045127 373 ------EPLISRFKIEYQH 385 (508)
Q Consensus 373 ------~~kl~Dfg~~~~~ 385 (508)
.+.|+||+.+...
T Consensus 247 ~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 247 PSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp TTSEEEEEEECCCTTCEET
T ss_pred ccccccceEEEEeCCcccC
Confidence 3899999876443
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.68 E-value=1.2e-16 Score=150.26 Aligned_cols=150 Identities=15% Similarity=0.136 Sum_probs=126.5
Q ss_pred CCCCCccccccCCCCCCcchhcccccccccccccCCCCCcccCCCccccCCCCCcCeEeCccCcccccCCc------ccc
Q 045127 23 CIHNPSLKYCNSSSPMDLNEIFKSTIVASHLCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCPL------GIM 96 (508)
Q Consensus 23 c~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~------~l~ 96 (508)
|.|....+.|+......+|.... ..+..|....|.+..+++..|.++++|+.|+|++|+|+...+. .++
T Consensus 17 ~~Cs~~~v~c~~~~l~~ip~~~~-----~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~ 91 (229)
T 3e6j_A 17 CSCSGTTVDCRSKRHASVPAGIP-----TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLT 91 (229)
T ss_dssp CEEETTEEECTTSCCSSCCSCCC-----TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred CEEeCCEeEccCCCcCccCCCCC-----CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcC
Confidence 44445589999877777776443 3566677777889998766899999999999999999764442 349
Q ss_pred EEEcccCcccCCCChhhhccCCccccccccccccCcCCchhhhcCCccceeccccccccCccccccccccccCCCCccCC
Q 045127 97 SIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLHS 176 (508)
Q Consensus 97 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~~~n 176 (508)
+|+|++|+|++..+..|..+++|++|+|++|+|+ .+| ..+..+++|+.|+|++|+|++++...+..+++|..+++.+|
T Consensus 92 ~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N 169 (229)
T 3e6j_A 92 VLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELP-RGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGN 169 (229)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCC-TTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTS
T ss_pred EEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccC-cccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCC
Confidence 9999999999887788899999999999999999 999 78899999999999999999966566788999999999999
Q ss_pred CCC
Q 045127 177 GLF 179 (508)
Q Consensus 177 ~~~ 179 (508)
++.
T Consensus 170 ~~~ 172 (229)
T 3e6j_A 170 PWD 172 (229)
T ss_dssp CBC
T ss_pred Ccc
Confidence 874
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.68 E-value=1.5e-16 Score=147.15 Aligned_cols=154 Identities=19% Similarity=0.145 Sum_probs=128.9
Q ss_pred CCcCCCCCccccccCCCCCCcchhcccccccccccccCCCCCcccCCCccccCCCCCcCeEeCccCcccccCCc------
Q 045127 20 MNNCIHNPSLKYCNSSSPMDLNEIFKSTIVASHLCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCPL------ 93 (508)
Q Consensus 20 ~~~c~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~------ 93 (508)
|..|.+.+..+.|+......+|.... ..+..|+...|.++.++...|+++++|+.|+|++|++++..+.
T Consensus 2 p~~C~C~~~~v~c~~~~l~~~p~~~~-----~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 76 (208)
T 2o6s_A 2 PSRCSCSGTTVECYSQGRTSVPTGIP-----AQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLT 76 (208)
T ss_dssp CTTCEEETTEEECCSSCCSSCCSCCC-----TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCT
T ss_pred cCCCEECCCEEEecCCCccCCCCCCC-----CCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCC
Confidence 66777777789998777667775442 2556677777889999986789999999999999999875442
Q ss_pred cccEEEcccCcccCCCChhhhccCCccccccccccccCcCCchhhhcCCccceeccccccccCccccccccccccCCCCc
Q 045127 94 GIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSF 173 (508)
Q Consensus 94 ~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~ 173 (508)
.+++|+|++|++++..+..|..+++|++|+|++|+++ .+|+..|..+++|+.|++++|++++++...+..+++|..+++
T Consensus 77 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l 155 (208)
T 2o6s_A 77 SLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQ-SLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWL 155 (208)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEEC
T ss_pred CcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCc-ccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEe
Confidence 3499999999999777777899999999999999999 666577899999999999999999955555788999999999
Q ss_pred cCCCCC
Q 045127 174 LHSGLF 179 (508)
Q Consensus 174 ~~n~~~ 179 (508)
.+|++.
T Consensus 156 ~~N~~~ 161 (208)
T 2o6s_A 156 HDNPWD 161 (208)
T ss_dssp CSCCBC
T ss_pred cCCCee
Confidence 999875
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=3.2e-16 Score=173.30 Aligned_cols=107 Identities=30% Similarity=0.475 Sum_probs=61.5
Q ss_pred ccCCCCCcCeEeCccCcccccCCccc------cEEEcccCcccCCCChhhhccCCccccccccccccCcCCchhhhcCCc
Q 045127 70 DLRSRPKITPLYLSFNFFWKYCPLGI------MSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLAN 143 (508)
Q Consensus 70 ~~~~l~~L~~L~L~~N~l~~~~p~~l------~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp~~~~~~l~~ 143 (508)
.|+.+++|+.|+|++|+++|.+|.++ +.|+|++|+++|.+|..|+++++|+.|||++|+++|.+| ..++.+++
T Consensus 627 ~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip-~~l~~l~~ 705 (768)
T 3rgz_A 627 TFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIP-QAMSALTM 705 (768)
T ss_dssp SCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCC-GGGGGCCC
T ss_pred hhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCC-hHHhCCCC
Confidence 34445555555555555555555333 556666666666666666666666666666666665555 55555666
Q ss_pred cceeccccccccCccccccccccccCCCCccCCCC
Q 045127 144 LTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLHSGL 178 (508)
Q Consensus 144 L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~~~n~~ 178 (508)
|+.|++++|+|+| .+|..+.+.++..+++.||+.
T Consensus 706 L~~L~ls~N~l~g-~iP~~~~~~~~~~~~~~gN~~ 739 (768)
T 3rgz_A 706 LTEIDLSNNNLSG-PIPEMGQFETFPPAKFLNNPG 739 (768)
T ss_dssp CSEEECCSSEEEE-ECCSSSSGGGSCGGGGCSCTE
T ss_pred CCEEECcCCcccc-cCCCchhhccCCHHHhcCCch
Confidence 6666666666666 555555555555555555554
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.63 E-value=1.5e-15 Score=146.42 Aligned_cols=130 Identities=18% Similarity=0.147 Sum_probs=101.4
Q ss_pred cccccCCCCCcccCCCccccCCCCCcCeEeCccCcccccCCc------cccEEEcccCcccCCCChhhhccCCccccccc
Q 045127 52 HLCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCPL------GIMSIDLSNNSLKGAFPIDVLLCTQIQALDLS 125 (508)
Q Consensus 52 ~l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~------~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 125 (508)
.|..|....|.++.+|...|..+++|+.|+|++|++++..|. .+++|+|++|++++..+..|..+++|+.|+|+
T Consensus 86 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 165 (270)
T 2o6q_A 86 NLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLY 165 (270)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEec
Confidence 455566666778888876778888888888888888775543 34888888888887666668888889999999
Q ss_pred cccccCcCCchhhhcCCccceeccccccccCccccccccccccCCCCccCCCCC-CCC
Q 045127 126 YNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLHSGLF-PGH 182 (508)
Q Consensus 126 ~N~l~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~~~n~~~-~c~ 182 (508)
+|+++ .+|+..|..+++|+.|++++|+++++++..+..+++|..+++.+|++. .|.
T Consensus 166 ~n~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 222 (270)
T 2o6q_A 166 NNQLK-RVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTCN 222 (270)
T ss_dssp SSCCS-CCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSSS
T ss_pred CCcCc-EeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCCc
Confidence 88888 566577888888999999999988855555777888888888888874 443
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A | Back alignment and structure |
|---|
Probab=99.63 E-value=1.8e-15 Score=144.11 Aligned_cols=127 Identities=20% Similarity=0.159 Sum_probs=91.2
Q ss_pred cccccCCCCCcccCCCccccCCCCCcCeEeCccCcccccCCc------cccEEEcccCcccCCCChhhhccCCccccccc
Q 045127 52 HLCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCPL------GIMSIDLSNNSLKGAFPIDVLLCTQIQALDLS 125 (508)
Q Consensus 52 ~l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~------~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 125 (508)
.|..|....|.+..+++..|.++++|+.|+|++|+|++..|. .+++|+|++|+|++..+..|..+++|++|+|+
T Consensus 60 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 139 (251)
T 3m19_A 60 KLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLN 139 (251)
T ss_dssp TCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred cCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECc
Confidence 344555555677777765677777788888888877764432 34778888888876666667778888888888
Q ss_pred cccccCcCCchhhhcCCccceeccccccccCccccccccccccCCCCccCCCCC
Q 045127 126 YNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLHSGLF 179 (508)
Q Consensus 126 ~N~l~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~~~n~~~ 179 (508)
+|+|+ .+|+..|..+++|+.|+|++|+|+++++..+..+++|..+++.+|++.
T Consensus 140 ~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 192 (251)
T 3m19_A 140 TNQLQ-SIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFD 192 (251)
T ss_dssp SSCCC-CCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBC
T ss_pred CCcCC-ccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCcee
Confidence 88887 555467777888888888888888755556667777888888888763
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A | Back alignment and structure |
|---|
Probab=99.63 E-value=9.2e-16 Score=149.49 Aligned_cols=125 Identities=21% Similarity=0.135 Sum_probs=100.1
Q ss_pred cccccCCCCCcccCCCccccCCCCCcCeEeCccCcccccCCc------cccEEEcccCcccCCCChhhhccCCccccccc
Q 045127 52 HLCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCPL------GIMSIDLSNNSLKGAFPIDVLLCTQIQALDLS 125 (508)
Q Consensus 52 ~l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~------~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 125 (508)
.|..|....|.++.+|. .+..+++|+.|+|++|+|++..|. .+++|+|++|+|++..+..|..+++|+.|+|+
T Consensus 78 ~L~~L~Ls~N~l~~l~~-~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 156 (290)
T 1p9a_G 78 VLGTLDLSHNQLQSLPL-LGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLA 156 (290)
T ss_dssp TCCEEECCSSCCSSCCC-CTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred cCCEEECCCCcCCcCch-hhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECC
Confidence 45556666678888887 788888888888888888875543 34888888888887777778888888888888
Q ss_pred cccccCcCCchhhhcCCccceeccccccccCccccccccccccCCCCccCCCCC
Q 045127 126 YNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLHSGLF 179 (508)
Q Consensus 126 ~N~l~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~~~n~~~ 179 (508)
+|+|+ .+|+..|..+++|+.|+|++|+|+. .++.+..+.++..+++.+|++.
T Consensus 157 ~N~l~-~l~~~~~~~l~~L~~L~L~~N~l~~-ip~~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 157 NNNLT-ELPAGLLNGLENLDTLLLQENSLYT-IPKGFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp TSCCS-CCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCCCSEEECCSCCBC
T ss_pred CCcCC-ccCHHHhcCcCCCCEEECCCCcCCc-cChhhcccccCCeEEeCCCCcc
Confidence 88888 7776777888888889999888887 6666666778888888888874
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 | Back alignment and structure |
|---|
Probab=99.62 E-value=6e-16 Score=141.27 Aligned_cols=102 Identities=23% Similarity=0.218 Sum_probs=52.3
Q ss_pred CcCeEeCccCcccccCCc-------cccEEEcccCcccCCCChhhhccCCccccccccccccCcCCchhhhcCCccceec
Q 045127 76 KITPLYLSFNFFWKYCPL-------GIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLN 148 (508)
Q Consensus 76 ~L~~L~L~~N~l~~~~p~-------~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp~~~~~~l~~L~~l~ 148 (508)
+|+.|+|++|+|++..|. .+++|+|++|+|++..|..|.++++|++|+|++|+|++..| ..|..+++|+.|+
T Consensus 30 ~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~ 108 (192)
T 1w8a_A 30 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISN-KMFLGLHQLKTLN 108 (192)
T ss_dssp TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECS-SSSTTCTTCCEEE
T ss_pred CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCH-HHhcCCCCCCEEE
Confidence 455555555555443321 12455555555555555555555555555555555553222 4455555555555
Q ss_pred cccccccCccccccccccccCCCCccCCCC
Q 045127 149 LSYNHFSEMKVSDTKFFQRFNSSSFLHSGL 178 (508)
Q Consensus 149 l~~N~l~~~~~~~~~~l~~l~~~~~~~n~~ 178 (508)
|++|+|+++.+..+..+++|..+++.+|++
T Consensus 109 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 138 (192)
T 1w8a_A 109 LYDNQISCVMPGSFEHLNSLTSLNLASNPF 138 (192)
T ss_dssp CCSSCCCEECTTSSTTCTTCCEEECTTCCB
T ss_pred CCCCcCCeeCHHHhhcCCCCCEEEeCCCCc
Confidence 555555553344444555555555555554
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.61 E-value=7.6e-16 Score=154.94 Aligned_cols=157 Identities=17% Similarity=0.132 Sum_probs=113.2
Q ss_pred CCCcCCcCCCCCccccccCCCCCCcchhcccccccccccccCCCCCcccCCCccccC-CCCCcCeEeCccCcccccCCc-
Q 045127 16 NSTIMNNCIHNPSLKYCNSSSPMDLNEIFKSTIVASHLCNESKNPNCVESFPKIDLR-SRPKITPLYLSFNFFWKYCPL- 93 (508)
Q Consensus 16 ~~~~~~~c~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~L~~~~n~~~~~p~~~~~-~l~~L~~L~L~~N~l~~~~p~- 93 (508)
...+|..|.|....+.|+......+|..+.. .+..|++..|.++.++...|. ++++|+.|+|++|+|++..|.
T Consensus 9 ~~~Cp~~C~C~~~~l~c~~~~l~~iP~~~~~-----~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~ 83 (361)
T 2xot_A 9 VVSCPANCLCASNILSCSKQQLPNVPQSLPS-----YTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEA 83 (361)
T ss_dssp CTTCCTTCEEETTEEECCSSCCSSCCSSCCT-----TCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTT
T ss_pred CCCCCCCCEECCCEEEeCCCCcCccCccCCC-----CCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhh
Confidence 3567888988888888987766677754432 244455666778888776676 788888888888888775553
Q ss_pred -----cccEEEcccCcccCCCChhhhccCCccccccccccccCcCCchhhhcCCccceeccccccccCcccccc---ccc
Q 045127 94 -----GIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDT---KFF 165 (508)
Q Consensus 94 -----~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~---~~l 165 (508)
.|++|+|++|+|++..+..|.++++|++|+|++|+|+ .+++..|..+++|+.|+|++|+|++++...+ ..+
T Consensus 84 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l 162 (361)
T 2xot_A 84 FVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIV-VVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKL 162 (361)
T ss_dssp TTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC-EECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----C
T ss_pred ccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCccc-EECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccC
Confidence 3478888888888777777888888888888888888 4433778888888888888888887443333 456
Q ss_pred cccCCCCccCCCC
Q 045127 166 QRFNSSSFLHSGL 178 (508)
Q Consensus 166 ~~l~~~~~~~n~~ 178 (508)
++|..+++.+|..
T Consensus 163 ~~L~~L~L~~N~l 175 (361)
T 2xot_A 163 PKLMLLDLSSNKL 175 (361)
T ss_dssp TTCCEEECCSSCC
T ss_pred CcCCEEECCCCCC
Confidence 7777777777754
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=1.1e-15 Score=168.93 Aligned_cols=82 Identities=26% Similarity=0.363 Sum_probs=72.0
Q ss_pred cEEEcccCcccCCCChhhhccCCccccccccccccCcCCchhhhcCCccceeccccccccCccccccccccccCCCCccC
Q 045127 96 MSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLH 175 (508)
Q Consensus 96 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~~~ 175 (508)
+.|||++|+++|.+|.+|+++++|+.|+|++|+++|.+| ..|+++++|+.|||++|+|+|..|..+..++.|..+++++
T Consensus 635 ~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip-~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~ 713 (768)
T 3rgz_A 635 MFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIP-DEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSN 713 (768)
T ss_dssp CEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCC-GGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCS
T ss_pred cEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCC-hHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcC
Confidence 578999999999999999999999999999999998998 8888999999999999999987777788888888888888
Q ss_pred CCC
Q 045127 176 SGL 178 (508)
Q Consensus 176 n~~ 178 (508)
|+.
T Consensus 714 N~l 716 (768)
T 3rgz_A 714 NNL 716 (768)
T ss_dssp SEE
T ss_pred Ccc
Confidence 865
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A | Back alignment and structure |
|---|
Probab=99.61 E-value=1.9e-15 Score=144.06 Aligned_cols=151 Identities=19% Similarity=0.183 Sum_probs=124.8
Q ss_pred CCC--CCccccccCCCCCCcchhcccccccccccccCCCCCcccCCCccccCCCCCcCeEeCccCcccccCCc------c
Q 045127 23 CIH--NPSLKYCNSSSPMDLNEIFKSTIVASHLCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCPL------G 94 (508)
Q Consensus 23 c~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~------~ 94 (508)
|.| ....+.|+......+|..+. ..+..|....|.+..+++..|+++++|+.|+|++|+|++..|. .
T Consensus 10 C~C~~~~~~l~~~~~~l~~~p~~~~-----~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 84 (251)
T 3m19_A 10 CTCNEGKKEVDCQGKSLDSVPSGIP-----ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTE 84 (251)
T ss_dssp SEEEGGGTEEECTTCCCSSCCSCCC-----TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTT
T ss_pred eEcCCCCeEEecCCCCccccCCCCC-----CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCc
Confidence 544 33346677666666665443 2455667777889999887899999999999999999987664 3
Q ss_pred ccEEEcccCcccCCCChhhhccCCccccccccccccCcCCchhhhcCCccceeccccccccCccccccccccccCCCCcc
Q 045127 95 IMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFL 174 (508)
Q Consensus 95 l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~~ 174 (508)
+++|+|++|++++..+..|..+++|++|+|++|+|+ .+|+..|..+++|+.|+|++|+|+++++..+..+++|+.+++.
T Consensus 85 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 163 (251)
T 3m19_A 85 LGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLK-SLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLS 163 (251)
T ss_dssp CCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCEEECCCCcccccChhHhcccCCCCEEEcCCCcCC-CcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECC
Confidence 499999999999888888999999999999999999 6775788999999999999999999555578889999999999
Q ss_pred CCCCC
Q 045127 175 HSGLF 179 (508)
Q Consensus 175 ~n~~~ 179 (508)
+|...
T Consensus 164 ~N~l~ 168 (251)
T 3m19_A 164 TNQLQ 168 (251)
T ss_dssp SSCCS
T ss_pred CCcCC
Confidence 99753
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.60 E-value=1.1e-17 Score=175.26 Aligned_cols=31 Identities=10% Similarity=-0.045 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHhhcCCCCccceeeEEecCC
Q 045127 278 IRDEFVEECKLLVQFQHKNLIRVLGWNNSRR 308 (508)
Q Consensus 278 ~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 308 (508)
..++|..|++.+.+++|+|+|+++|||....
T Consensus 322 g~~eF~~Eve~L~~i~HrNLV~L~gyC~s~~ 352 (487)
T 3oja_A 322 GSETERLECERENQARQREIDALKEQYRTVI 352 (487)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHTCCCC
T ss_pred cHHHHHHHHHHHhcccccchhhHHHHhcChH
Confidence 4678999999999999999999999997643
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.59 E-value=1.8e-15 Score=138.27 Aligned_cols=102 Identities=30% Similarity=0.329 Sum_probs=60.4
Q ss_pred CcCeEeCccCcccccCCcc------ccEEEcccCcccCCCChhhhccCCccccccccccccCcCCchhhhcCCccceecc
Q 045127 76 KITPLYLSFNFFWKYCPLG------IMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNL 149 (508)
Q Consensus 76 ~L~~L~L~~N~l~~~~p~~------l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp~~~~~~l~~L~~l~l 149 (508)
+|+.|+|++|+|+. +|.. ++.|+|++|+|++..+..|.++++|++|+|++|+|+ .+|+..|..+++|+.|+|
T Consensus 32 ~l~~L~L~~n~i~~-ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~-~i~~~~f~~l~~L~~L~L 109 (193)
T 2wfh_A 32 DVTELYLDGNQFTL-VPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLR-CIPPRTFDGLKSLRLLSL 109 (193)
T ss_dssp TCCEEECCSSCCCS-CCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-BCCTTTTTTCTTCCEEEC
T ss_pred CCCEEECCCCcCch-hHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccC-EeCHHHhCCCCCCCEEEC
Confidence 45555555555542 3322 255555555555555556666666666666666666 444356666666666666
Q ss_pred ccccccCccccccccccccCCCCccCCCCC
Q 045127 150 SYNHFSEMKVSDTKFFQRFNSSSFLHSGLF 179 (508)
Q Consensus 150 ~~N~l~~~~~~~~~~l~~l~~~~~~~n~~~ 179 (508)
++|+|++++...+..+++|..+++.+|++.
T Consensus 110 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 110 HGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp CSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 666666644444556666666666666653
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A | Back alignment and structure |
|---|
Probab=99.59 E-value=5.2e-15 Score=142.75 Aligned_cols=127 Identities=20% Similarity=0.150 Sum_probs=110.5
Q ss_pred cccccCCCCCcccCCCccccCCCCCcCeEeCccCcccccCCc------cccEEEcccCcccCCCChhhhccCCccccccc
Q 045127 52 HLCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCPL------GIMSIDLSNNSLKGAFPIDVLLCTQIQALDLS 125 (508)
Q Consensus 52 ~l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~------~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 125 (508)
.|..|....|.++.++...|+++++|+.|+|++|++++..|. .+++|+|++|++++..|..|..+++|++|+|+
T Consensus 86 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 165 (272)
T 3rfs_A 86 NLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLS 165 (272)
T ss_dssp TCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECC
Confidence 456677777889999986789999999999999999976553 35999999999998878888999999999999
Q ss_pred cccccCcCCchhhhcCCccceeccccccccCccccccccccccCCCCccCCCCC
Q 045127 126 YNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLHSGLF 179 (508)
Q Consensus 126 ~N~l~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~~~n~~~ 179 (508)
+|+++ .+|+..|..+++|+.|++++|+++++++..+..+++|+.+++.+|++.
T Consensus 166 ~n~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 218 (272)
T 3rfs_A 166 YNQLQ-SLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWD 218 (272)
T ss_dssp SSCCC-CCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred CCCcC-ccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcc
Confidence 99999 555478899999999999999999965556788999999999999875
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 | Back alignment and structure |
|---|
Probab=99.58 E-value=1.3e-15 Score=150.21 Aligned_cols=80 Identities=29% Similarity=0.448 Sum_probs=48.4
Q ss_pred cEEEcccCcccCCCChhhhccCCccccccccccccCcCCchhhhcCCccceeccccccccCccccccccccccCCCCccC
Q 045127 96 MSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLH 175 (508)
Q Consensus 96 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~~~ 175 (508)
+.|+|++|++++.+|. +..+++|++|+|++|+++|.+| ..|..+++|+.|++++|+|+| .+|....+++|..+++.+
T Consensus 224 ~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p-~~l~~l~~L~~L~Ls~N~l~~-~ip~~~~l~~L~~l~l~~ 300 (313)
T 1ogq_A 224 QKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLP-QGLTQLKFLHSLNVSFNNLCG-EIPQGGNLQRFDVSAYAN 300 (313)
T ss_dssp SEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCC-GGGGGCTTCCEEECCSSEEEE-ECCCSTTGGGSCGGGTCS
T ss_pred CEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCC-hHHhcCcCCCEEECcCCcccc-cCCCCccccccChHHhcC
Confidence 4555555555544333 4555666666666666666666 566666666677777776666 444446666666666666
Q ss_pred CCC
Q 045127 176 SGL 178 (508)
Q Consensus 176 n~~ 178 (508)
|++
T Consensus 301 N~~ 303 (313)
T 1ogq_A 301 NKC 303 (313)
T ss_dssp SSE
T ss_pred CCC
Confidence 664
|
| >4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=2.9e-15 Score=161.46 Aligned_cols=147 Identities=13% Similarity=0.019 Sum_probs=123.4
Q ss_pred CccccccCCCCCCcchhcccccccccccccCCCCCcccCCCccccCCCCCcCeEeCccCcccccCCcc------ccEEEc
Q 045127 27 PSLKYCNSSSPMDLNEIFKSTIVASHLCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCPLG------IMSIDL 100 (508)
Q Consensus 27 ~~~~~~~~~~~~~l~~~~~~~~~~~~l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~------l~~L~L 100 (508)
...+.|+......+|.... ..+..|++..|.++.+|+.+|.++++|++|+|++|+|++..|.. |++|+|
T Consensus 33 ~~~~~c~~~~l~~vP~~lp-----~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~L 107 (635)
T 4g8a_A 33 NITYQCMELNFYKIPDNLP-----FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLIL 107 (635)
T ss_dssp TTEEECTTSCCSSCCSSSC-----TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCEEECCCCCcCccCCCCC-----cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEc
Confidence 3456799887778886543 34556677778999999879999999999999999999866644 499999
Q ss_pred ccCcccCCCChhhhccCCccccccccccccCcCCchhhhcCCccceeccccccccCcc-ccccccccccCCCCccCCCCC
Q 045127 101 SNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMK-VSDTKFFQRFNSSSFLHSGLF 179 (508)
Q Consensus 101 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp~~~~~~l~~L~~l~l~~N~l~~~~-~~~~~~l~~l~~~~~~~n~~~ 179 (508)
++|+|++..|..|.++++|++|+|++|+|+ .+|+..|+++++|+.|++++|+++++. +..+..+++|+.+++.+|...
T Consensus 108 s~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~-~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~ 186 (635)
T 4g8a_A 108 TGNPIQSLALGAFSGLSSLQKLVAVETNLA-SLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQ 186 (635)
T ss_dssp TTCCCCEECGGGGTTCTTCCEEECTTSCCC-CSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCC
T ss_pred cCCcCCCCCHHHhcCCCCCCEEECCCCcCC-CCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCcccc
Confidence 999999887788999999999999999999 677578999999999999999998754 445567899999999988653
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=4.9e-15 Score=143.80 Aligned_cols=124 Identities=17% Similarity=0.136 Sum_probs=65.5
Q ss_pred ccccCCCCCc-ccCCCccccCCCCCcCeEeCccCcccccCCc------cccEEEcccCcccCCCChhhhccCCccccccc
Q 045127 53 LCNESKNPNC-VESFPKIDLRSRPKITPLYLSFNFFWKYCPL------GIMSIDLSNNSLKGAFPIDVLLCTQIQALDLS 125 (508)
Q Consensus 53 l~~L~~~~n~-~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~------~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 125 (508)
|..|+...|. ++.+++..|..+++|+.|+|++|.+++..|. .+++|+|++|++++..+..|+.+++|++|+|+
T Consensus 82 L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 161 (285)
T 1ozn_A 82 LEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLH 161 (285)
T ss_dssp CCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECC
Confidence 3334444443 5555433566666666666666666554332 23556666666554444445555555556665
Q ss_pred cccccCcCCchhhhcCCccceeccccccccCccccccccccccCCCCccCCC
Q 045127 126 YNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLHSG 177 (508)
Q Consensus 126 ~N~l~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~~~n~ 177 (508)
+|+++ .+|+..|..+++|+.|++++|++++..+..+..+++|+.+++.+|.
T Consensus 162 ~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 212 (285)
T 1ozn_A 162 GNRIS-SVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANN 212 (285)
T ss_dssp SSCCC-EECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred CCccc-ccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCc
Confidence 55555 4443445555555555555555555334444445555555555553
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.57 E-value=3.4e-15 Score=154.28 Aligned_cols=120 Identities=16% Similarity=0.135 Sum_probs=102.3
Q ss_pred CcccCCCccccCCCCCcCeEeCccCcccccCC-----ccccEEEcccCcccCCCChhhhccCCccccccccccccCcCCc
Q 045127 61 NCVESFPKIDLRSRPKITPLYLSFNFFWKYCP-----LGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPV 135 (508)
Q Consensus 61 n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p-----~~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp~ 135 (508)
|.++.++...|.++++|+.|+|++|+++. +| ..|+.|+|++|++++..|..|.++++|+.|+|++|++++..|
T Consensus 171 ~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~- 248 (440)
T 3zyj_A 171 KRLSYISEGAFEGLSNLRYLNLAMCNLRE-IPNLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIER- 248 (440)
T ss_dssp TTCCEECTTTTTTCSSCCEEECTTSCCSS-CCCCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECT-
T ss_pred CCcceeCcchhhcccccCeecCCCCcCcc-ccccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEECh-
Confidence 46667776678888888888888888875 44 356999999999999889999999999999999999994444
Q ss_pred hhhhcCCccceeccccccccCccccccccccccCCCCccCCCCC-CCC
Q 045127 136 ESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLHSGLF-PGH 182 (508)
Q Consensus 136 ~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~~~n~~~-~c~ 182 (508)
..|..+++|+.|+|++|+|+++++..+..+++|..+++.+|++. .|.
T Consensus 249 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~ 296 (440)
T 3zyj_A 249 NAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCNCD 296 (440)
T ss_dssp TSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEECSST
T ss_pred hhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccCCCC
Confidence 88999999999999999999966667788999999999999985 565
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.57 E-value=1.7e-15 Score=150.24 Aligned_cols=169 Identities=14% Similarity=0.078 Sum_probs=103.2
Q ss_pred cccccCCCCCCCCCCcCCcCCCCCccccccCCCCC--CcchhcccccccccccccCCCC-CcccCCCccccC--------
Q 045127 4 EDLNNLHPPPDFNSTIMNNCIHNPSLKYCNSSSPM--DLNEIFKSTIVASHLCNESKNP-NCVESFPKIDLR-------- 72 (508)
Q Consensus 4 ~~l~~l~~~~~~~~~~~~~c~~~~~~~~~~~~~~~--~l~~~~~~~~~~~~l~~L~~~~-n~~~~~p~~~~~-------- 72 (508)
..|..|++..|....+|........+.+++...+. .+|..+. ... .|..|.... +.++.+|. .++
T Consensus 104 ~~L~~L~L~~n~l~~lp~~~~~l~~L~~L~Ls~n~l~~lp~~l~-~l~--~L~~L~L~~n~~~~~~p~-~~~~~~~~~~~ 179 (328)
T 4fcg_A 104 SHLQHMTIDAAGLMELPDTMQQFAGLETLTLARNPLRALPASIA-SLN--RLRELSIRACPELTELPE-PLASTDASGEH 179 (328)
T ss_dssp TTCSEEEEESSCCCCCCSCGGGGTTCSEEEEESCCCCCCCGGGG-GCT--TCCEEEEEEETTCCCCCS-CSEEEC-CCCE
T ss_pred CCCCEEECCCCCccchhHHHhccCCCCEEECCCCccccCcHHHh-cCc--CCCEEECCCCCCccccCh-hHhhccchhhh
Confidence 35556666666666665433222223333211111 2332221 011 233333333 35566665 544
Q ss_pred -CCCCcCeEeCccCcccccCCcc------ccEEEcccCcccCCCChhhhccCCccccccccccccCcCCchhhhcCCccc
Q 045127 73 -SRPKITPLYLSFNFFWKYCPLG------IMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLT 145 (508)
Q Consensus 73 -~l~~L~~L~L~~N~l~~~~p~~------l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp~~~~~~l~~L~ 145 (508)
++++|+.|+|++|+|+ .+|.. +++|+|++|++++ +|..+..+++|++|+|++|++.+.+| ..|+.+++|+
T Consensus 180 ~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p-~~~~~l~~L~ 256 (328)
T 4fcg_A 180 QGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYP-PIFGGRAPLK 256 (328)
T ss_dssp EESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEECTTCTTCCBCC-CCTTCCCCCC
T ss_pred ccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEECcCCcchhhhH-HHhcCCCCCC
Confidence 3778888888888777 45543 3778888888874 56677777888888888877777777 6777778888
Q ss_pred eeccccccccCccccccccccccCCCCccCCCCC
Q 045127 146 FLNLSYNHFSEMKVSDTKFFQRFNSSSFLHSGLF 179 (508)
Q Consensus 146 ~l~l~~N~l~~~~~~~~~~l~~l~~~~~~~n~~~ 179 (508)
.|++++|++.+..+..+..+++|..+++.+|...
T Consensus 257 ~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~ 290 (328)
T 4fcg_A 257 RLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNL 290 (328)
T ss_dssp EEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTC
T ss_pred EEECCCCCchhhcchhhhcCCCCCEEeCCCCCch
Confidence 8888887777755556677777777777777654
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 | Back alignment and structure |
|---|
Probab=99.56 E-value=2.6e-15 Score=147.94 Aligned_cols=150 Identities=23% Similarity=0.288 Sum_probs=77.0
Q ss_pred CCCCCCcCCcCCCCCccccccCCCCCCcchhcccccccccccccCCCCCccc---CCCccccCCCCCcCeEeCcc-Cccc
Q 045127 13 PDFNSTIMNNCIHNPSLKYCNSSSPMDLNEIFKSTIVASHLCNESKNPNCVE---SFPKIDLRSRPKITPLYLSF-NFFW 88 (508)
Q Consensus 13 ~~~~~~~~~~c~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~L~~~~n~~~---~~p~~~~~~l~~L~~L~L~~-N~l~ 88 (508)
..|... .+.|.+.+..+.|+.... ..++..|+...|.+. .+|. .|+++++|++|+|++ |.+.
T Consensus 25 ~~W~~~-~~~C~~~w~gv~C~~~~~------------~~~l~~L~L~~~~l~~~~~~~~-~l~~l~~L~~L~L~~~n~l~ 90 (313)
T 1ogq_A 25 SSWLPT-TDCCNRTWLGVLCDTDTQ------------TYRVNNLDLSGLNLPKPYPIPS-SLANLPYLNFLYIGGINNLV 90 (313)
T ss_dssp TTCCTT-SCTTTTCSTTEEECCSSS------------CCCEEEEEEECCCCSSCEECCG-GGGGCTTCSEEEEEEETTEE
T ss_pred cCCCCC-CCCCcCCCcceEeCCCCC------------CceEEEEECCCCCccCCcccCh-hHhCCCCCCeeeCCCCCccc
Confidence 578654 345763344899974310 001222222223333 3454 555555555555553 5555
Q ss_pred ccCCccc------cEEEcccCcccCCCChhhhccCCccccccccccccCcCCchhhhcCCccceeccccccccCcccccc
Q 045127 89 KYCPLGI------MSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDT 162 (508)
Q Consensus 89 ~~~p~~l------~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~ 162 (508)
+.+|..+ ++|+|++|++++.+|..|..+++|++|+|++|++++.+| ..|..+++|+.|++++|++++..+..+
T Consensus 91 ~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~l 169 (313)
T 1ogq_A 91 GPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLP-PSISSLPNLVGITFDGNRISGAIPDSY 169 (313)
T ss_dssp SCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCC-GGGGGCTTCCEEECCSSCCEEECCGGG
T ss_pred ccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCC-hHHhcCCCCCeEECcCCcccCcCCHHH
Confidence 5555332 555555555555555555555555555555555555555 455555555555555555554344444
Q ss_pred cccc-ccCCCCccCCC
Q 045127 163 KFFQ-RFNSSSFLHSG 177 (508)
Q Consensus 163 ~~l~-~l~~~~~~~n~ 177 (508)
..+. +|+.+++.+|.
T Consensus 170 ~~l~~~L~~L~L~~N~ 185 (313)
T 1ogq_A 170 GSFSKLFTSMTISRNR 185 (313)
T ss_dssp GCCCTTCCEEECCSSE
T ss_pred hhhhhcCcEEECcCCe
Confidence 4444 55555555553
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* | Back alignment and structure |
|---|
Probab=99.56 E-value=8.5e-15 Score=142.10 Aligned_cols=154 Identities=17% Similarity=0.178 Sum_probs=119.3
Q ss_pred cCCcCCCCCc---cccccCCCCCCcchhcccccccccccccCCCCCcccCCCccccCCCCCcCeEeCccCcccccCCcc-
Q 045127 19 IMNNCIHNPS---LKYCNSSSPMDLNEIFKSTIVASHLCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCPLG- 94 (508)
Q Consensus 19 ~~~~c~~~~~---~~~~~~~~~~~l~~~~~~~~~~~~l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~- 94 (508)
+|..|.|..+ .+.|+......+|..+. ..+..|....|.++.++...|+.+++|++|+|++|.+++..|..
T Consensus 2 CP~~C~C~~~~~~~~~c~~~~l~~ip~~~~-----~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~ 76 (285)
T 1ozn_A 2 CPGACVCYNEPKVTTSCPQQGLQAVPVGIP-----AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAF 76 (285)
T ss_dssp CCTTCEEECSSSCEEECCSSCCSSCCTTCC-----TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTT
T ss_pred cCCCceECCCCCeEEEcCcCCcccCCcCCC-----CCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhc
Confidence 5667777543 36787766667765432 24556666678888888767899999999999999988765643
Q ss_pred -----ccEEEcccCc-ccCCCChhhhccCCccccccccccccCcCCchhhhcCCccceeccccccccCcccccccccccc
Q 045127 95 -----IMSIDLSNNS-LKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRF 168 (508)
Q Consensus 95 -----l~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l 168 (508)
+++|+|++|. ++...|..|..+++|++|+|++|++++..| ..|..+++|+.|++++|+++++++..+..+++|
T Consensus 77 ~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 155 (285)
T 1ozn_A 77 TGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGP-GLFRGLAALQYLYLQDNALQALPDDTFRDLGNL 155 (285)
T ss_dssp TTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCT-TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC
T ss_pred CCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECH-hHhhCCcCCCEEECCCCcccccCHhHhccCCCc
Confidence 4899999997 876668888999999999999999984445 788889999999999999998555557788888
Q ss_pred CCCCccCCCC
Q 045127 169 NSSSFLHSGL 178 (508)
Q Consensus 169 ~~~~~~~n~~ 178 (508)
+.+++.+|..
T Consensus 156 ~~L~l~~n~l 165 (285)
T 1ozn_A 156 THLFLHGNRI 165 (285)
T ss_dssp CEEECCSSCC
T ss_pred cEEECCCCcc
Confidence 8888888864
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 | Back alignment and structure |
|---|
Probab=99.56 E-value=5.5e-15 Score=134.86 Aligned_cols=132 Identities=24% Similarity=0.219 Sum_probs=113.0
Q ss_pred cCCcCCCCCccccccCCCCCCcchhcccccccccccccCCCCCcccCCCcc-ccCCCCCcCeEeCccCcccccCCcc---
Q 045127 19 IMNNCIHNPSLKYCNSSSPMDLNEIFKSTIVASHLCNESKNPNCVESFPKI-DLRSRPKITPLYLSFNFFWKYCPLG--- 94 (508)
Q Consensus 19 ~~~~c~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~L~~~~n~~~~~p~~-~~~~l~~L~~L~L~~N~l~~~~p~~--- 94 (508)
.|..|.+......|+......+|..+.. .+..|....|.++.++.. .|+.+++|+.|+|++|+|++..|..
T Consensus 2 CP~~C~C~~~~l~~s~~~l~~ip~~~~~-----~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 76 (192)
T 1w8a_A 2 CPAMCHCEGTTVDCTGRGLKEIPRDIPL-----HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEG 76 (192)
T ss_dssp CCTTSEEETTEEECTTSCCSSCCSCCCT-----TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTT
T ss_pred cCCCCEECCCEEEcCCCCcCcCccCCCC-----CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCC
Confidence 5677888777888887766677764432 556677777889999873 3999999999999999999887754
Q ss_pred ---ccEEEcccCcccCCCChhhhccCCccccccccccccCcCCchhhhcCCccceeccccccccC
Q 045127 95 ---IMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSE 156 (508)
Q Consensus 95 ---l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp~~~~~~l~~L~~l~l~~N~l~~ 156 (508)
+++|+|++|+|++..|..|.++++|++|+|++|+|++..| ..|..+++|+.|++++|++++
T Consensus 77 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~c 140 (192)
T 1w8a_A 77 ASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMP-GSFEHLNSLTSLNLASNPFNC 140 (192)
T ss_dssp CTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECT-TSSTTCTTCCEEECTTCCBCC
T ss_pred cccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCH-HHhhcCCCCCEEEeCCCCccC
Confidence 4999999999999989889999999999999999997767 899999999999999999998
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.55 E-value=2.2e-14 Score=138.17 Aligned_cols=145 Identities=19% Similarity=0.223 Sum_probs=85.1
Q ss_pred ccccccCCCCCCcchhcccccccccccccCCCCCcccCCCccccCCCCCcCeEeCccCcccccCC------ccccEEEcc
Q 045127 28 SLKYCNSSSPMDLNEIFKSTIVASHLCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCP------LGIMSIDLS 101 (508)
Q Consensus 28 ~~~~~~~~~~~~l~~~~~~~~~~~~l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p------~~l~~L~Ls 101 (508)
..+.|+......+|..+. ..+..|....|.+..++...|.++++|++|+|++|.++...+ ..+++|+|+
T Consensus 19 ~~l~~~~~~l~~ip~~~~-----~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~ 93 (270)
T 2o6q_A 19 NSVDCSSKKLTAIPSNIP-----ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVT 93 (270)
T ss_dssp TEEECTTSCCSSCCSCCC-----TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECC
T ss_pred CEEEccCCCCCccCCCCC-----CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECC
Confidence 345555544445554332 234444555566666665566677777777777776664322 123666676
Q ss_pred cCcccCCCChhhhccCCccccccccccccCcCCchhhhcCCccceeccccccccCccccccccccccCCCCccCCCC
Q 045127 102 NNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLHSGL 178 (508)
Q Consensus 102 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~~~n~~ 178 (508)
+|++++..+..|..+++|++|+|++|+++ .+|+..|..+++|+.|++++|++++++...+..+++|+.+++.+|..
T Consensus 94 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l 169 (270)
T 2o6q_A 94 DNKLQALPIGVFDQLVNLAELRLDRNQLK-SLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQL 169 (270)
T ss_dssp SSCCCCCCTTTTTTCSSCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred CCcCCcCCHhHcccccCCCEEECCCCccC-eeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcC
Confidence 66666555555666666666666666666 44435566666666666666666664434455566666666666643
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.55 E-value=4.2e-15 Score=147.44 Aligned_cols=167 Identities=11% Similarity=0.061 Sum_probs=104.9
Q ss_pred ccccCCCCCCCCCCcCCcCCCCCccccccCCCCC--CcchhcccccccccccccCCCCCcccCCCccccCCCCCcCeEeC
Q 045127 5 DLNNLHPPPDFNSTIMNNCIHNPSLKYCNSSSPM--DLNEIFKSTIVASHLCNESKNPNCVESFPKIDLRSRPKITPLYL 82 (508)
Q Consensus 5 ~l~~l~~~~~~~~~~~~~c~~~~~~~~~~~~~~~--~l~~~~~~~~~~~~l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L 82 (508)
.+..|+++.+....+|........+.+++...+. .+|..+. .. ..|..|+...|.+..+|. .|+++++|+.|+|
T Consensus 82 ~l~~L~L~~n~l~~lp~~l~~l~~L~~L~L~~n~l~~lp~~~~-~l--~~L~~L~Ls~n~l~~lp~-~l~~l~~L~~L~L 157 (328)
T 4fcg_A 82 GRVALELRSVPLPQFPDQAFRLSHLQHMTIDAAGLMELPDTMQ-QF--AGLETLTLARNPLRALPA-SIASLNRLRELSI 157 (328)
T ss_dssp TCCEEEEESSCCSSCCSCGGGGTTCSEEEEESSCCCCCCSCGG-GG--TTCSEEEEESCCCCCCCG-GGGGCTTCCEEEE
T ss_pred ceeEEEccCCCchhcChhhhhCCCCCEEECCCCCccchhHHHh-cc--CCCCEEECCCCccccCcH-HHhcCcCCCEEEC
Confidence 4455556666666665543332233333311111 2332211 01 134445555566777776 7777777778888
Q ss_pred ccCcccccCCc---------------cccEEEcccCcccCCCChhhhccCCccccccccccccCcCCchhhhcCCcccee
Q 045127 83 SFNFFWKYCPL---------------GIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFL 147 (508)
Q Consensus 83 ~~N~l~~~~p~---------------~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp~~~~~~l~~L~~l 147 (508)
++|++.+.+|. .+++|+|++|+++ .+|..++.+++|++|+|++|+++ .+| ..++.+++|+.|
T Consensus 158 ~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~-~l~-~~l~~l~~L~~L 234 (328)
T 4fcg_A 158 RACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS-ALG-PAIHHLPKLEEL 234 (328)
T ss_dssp EEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCC-CCC-GGGGGCTTCCEE
T ss_pred CCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCC-cCc-hhhccCCCCCEE
Confidence 77777666653 2377778877777 67777777778888888888877 566 457777778888
Q ss_pred ccccccccCccccccccccccCCCCccCCCC
Q 045127 148 NLSYNHFSEMKVSDTKFFQRFNSSSFLHSGL 178 (508)
Q Consensus 148 ~l~~N~l~~~~~~~~~~l~~l~~~~~~~n~~ 178 (508)
++++|++.+..+..+..+++|+.+++.+|..
T Consensus 235 ~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~ 265 (328)
T 4fcg_A 235 DLRGCTALRNYPPIFGGRAPLKRLILKDCSN 265 (328)
T ss_dssp ECTTCTTCCBCCCCTTCCCCCCEEECTTCTT
T ss_pred ECcCCcchhhhHHHhcCCCCCCEEECCCCCc
Confidence 8887777775566667777777777777654
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.55 E-value=9.3e-15 Score=131.36 Aligned_cols=131 Identities=22% Similarity=0.167 Sum_probs=86.4
Q ss_pred CCcCCCCCccccccCCCCCCcchhcccccccccccccCCCCCcccCCCccccCCCCCcCeEeCccCcccccCCc------
Q 045127 20 MNNCIHNPSLKYCNSSSPMDLNEIFKSTIVASHLCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCPL------ 93 (508)
Q Consensus 20 ~~~c~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~------ 93 (508)
|..|.+......|+......+|.... ..+..|....|.++.+|...|+.+++|+.|+|++|+|++..|.
T Consensus 2 p~~C~C~~~~l~~~~~~l~~~p~~~~-----~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 76 (177)
T 2o6r_A 2 PSRCSCSGTEIRCNSKGLTSVPTGIP-----SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLT 76 (177)
T ss_dssp CTTCEEETTEEECCSSCCSSCCTTCC-----TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCT
T ss_pred cCCCEeCCCEEEecCCCCccCCCCCC-----CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCC
Confidence 55676666677777665555554332 2444555555667777765667777777777777777654332
Q ss_pred cccEEEcccCcccCCCChhhhccCCccccccccccccCcCCchhhhcCCccceeccccccccC
Q 045127 94 GIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSE 156 (508)
Q Consensus 94 ~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp~~~~~~l~~L~~l~l~~N~l~~ 156 (508)
.+++|+|++|++++..+..|..+++|++|+|++|+++ .+|+..|..+++|+.|++++|++++
T Consensus 77 ~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~~~~~~~~l~~L~~L~l~~N~~~~ 138 (177)
T 2o6r_A 77 KLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLK-SVPDGIFDRLTSLQKIWLHTNPWDC 138 (177)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS-CCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred ccCEEECCCCCccccCHHHhhCCcccCEEECcCCcce-EeCHHHhcCCcccCEEEecCCCeec
Confidence 2367777777777665656677777777777777777 5554556667777777777777776
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A | Back alignment and structure |
|---|
Probab=99.55 E-value=1.1e-14 Score=150.92 Aligned_cols=120 Identities=18% Similarity=0.124 Sum_probs=102.3
Q ss_pred CcccCCCccccCCCCCcCeEeCccCcccccCC-----ccccEEEcccCcccCCCChhhhccCCccccccccccccCcCCc
Q 045127 61 NCVESFPKIDLRSRPKITPLYLSFNFFWKYCP-----LGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPV 135 (508)
Q Consensus 61 n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p-----~~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp~ 135 (508)
|.++.++...|.++++|+.|+|++|++++ +| ..++.|+|++|++++..|..|.++++|+.|+|++|++++..|
T Consensus 182 ~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~- 259 (452)
T 3zyi_A 182 KKLEYISEGAFEGLFNLKYLNLGMCNIKD-MPNLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIER- 259 (452)
T ss_dssp TTCCEECTTTTTTCTTCCEEECTTSCCSS-CCCCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECT-
T ss_pred CCccccChhhccCCCCCCEEECCCCcccc-cccccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECH-
Confidence 46667776678888888888898898876 34 356999999999999989999999999999999999995555
Q ss_pred hhhhcCCccceeccccccccCccccccccccccCCCCccCCCCC-CCC
Q 045127 136 ESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLHSGLF-PGH 182 (508)
Q Consensus 136 ~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~~~n~~~-~c~ 182 (508)
..|..+++|+.|+|++|+|++++...+..+++|..+++.+|++. .|.
T Consensus 260 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~ 307 (452)
T 3zyi_A 260 NAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCD 307 (452)
T ss_dssp TTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECSTT
T ss_pred HHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCCCCC
Confidence 88999999999999999999966666788999999999999875 454
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A | Back alignment and structure |
|---|
Probab=99.54 E-value=1.8e-14 Score=140.34 Aligned_cols=124 Identities=19% Similarity=0.205 Sum_probs=91.0
Q ss_pred cccccCCCCCcccCCCccccCCCCCcCeEeCccCcccccCCc------cccEEEcccCcccCCCChhhhccCCccccccc
Q 045127 52 HLCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCPL------GIMSIDLSNNSLKGAFPIDVLLCTQIQALDLS 125 (508)
Q Consensus 52 ~l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~------~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 125 (508)
.|..|....|.++.++. .+.+++|+.|+|++|+|+. +|. .+++|+|++|+|++..|..|.++++|++|+|+
T Consensus 56 ~L~~L~L~~n~l~~~~~--~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~ 132 (290)
T 1p9a_G 56 RLTQLNLDRAELTKLQV--DGTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 132 (290)
T ss_dssp TCCEEECTTSCCCEEEC--CSCCTTCCEEECCSSCCSS-CCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECT
T ss_pred CCCEEECCCCccCcccC--CCCCCcCCEEECCCCcCCc-CchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECC
Confidence 34455556667777765 3677778888888887764 443 34788888888887767778888888888888
Q ss_pred cccccCcCCchhhhcCCccceeccccccccCccccccccccccCCCCccCCCCC
Q 045127 126 YNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLHSGLF 179 (508)
Q Consensus 126 ~N~l~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~~~n~~~ 179 (508)
+|+|+ .+|+..|..+++|+.|+|++|+|++++...+..+++|+.+++.+|...
T Consensus 133 ~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~ 185 (290)
T 1p9a_G 133 GNELK-TLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY 185 (290)
T ss_dssp TSCCC-CCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred CCCCC-ccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC
Confidence 88888 566577778888888888888888754445567788888888887653
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.54 E-value=1.2e-14 Score=132.74 Aligned_cols=132 Identities=20% Similarity=0.200 Sum_probs=113.1
Q ss_pred CcCCcCCCCCccccccCCCCCCcchhcccccccccccccCCCCCcccCCCccccCCCCCcCeEeCccCcccccCCcc---
Q 045127 18 TIMNNCIHNPSLKYCNSSSPMDLNEIFKSTIVASHLCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCPLG--- 94 (508)
Q Consensus 18 ~~~~~c~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~--- 94 (508)
.+|..|.+......|+......+|..+. ..+..|....|.++.+|. .|.++++|+.|+|++|+|++..|..
T Consensus 3 ~CP~~C~C~~~~l~~~~~~l~~ip~~~~-----~~l~~L~L~~n~i~~ip~-~~~~l~~L~~L~Ls~N~i~~i~~~~f~~ 76 (193)
T 2wfh_A 3 RCPTECTCLDTVVRCSNKGLKVLPKGIP-----RDVTELYLDGNQFTLVPK-ELSNYKHLTLIDLSNNRISTLSNQSFSN 76 (193)
T ss_dssp -CCTTCEEETTEEECTTSCCSSCCSCCC-----TTCCEEECCSSCCCSCCG-GGGGCTTCCEEECCSSCCCCCCTTTTTT
T ss_pred CCCCCCEeCCCEEEcCCCCCCcCCCCCC-----CCCCEEECCCCcCchhHH-HhhcccCCCEEECCCCcCCEeCHhHccC
Confidence 4677888877788888776667775442 256667777789999996 9999999999999999999866643
Q ss_pred ---ccEEEcccCcccCCCChhhhccCCccccccccccccCcCCchhhhcCCccceeccccccccC
Q 045127 95 ---IMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSE 156 (508)
Q Consensus 95 ---l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp~~~~~~l~~L~~l~l~~N~l~~ 156 (508)
|++|+|++|+|++..|..|.++++|++|+|++|+|+ .+|+..|..+++|+.|++++|++..
T Consensus 77 l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 77 MTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDIS-VVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCCC-BCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CCCCCEEECCCCccCEeCHHHhCCCCCCCEEECCCCCCC-eeChhhhhcCccccEEEeCCCCeec
Confidence 499999999999988889999999999999999999 7886789999999999999999986
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.53 E-value=1.1e-14 Score=146.37 Aligned_cols=127 Identities=24% Similarity=0.203 Sum_probs=108.3
Q ss_pred cccccCCCCCcccCCCccccCCCCCcCeEeCccCcccccCCc------cccEEEcccCcccCCCChhhhccCCccccccc
Q 045127 52 HLCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCPL------GIMSIDLSNNSLKGAFPIDVLLCTQIQALDLS 125 (508)
Q Consensus 52 ~l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~------~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 125 (508)
.|..|.+..|.+..+++..|.++++|+.|+|++|+|++..+. .|++|+|++|+|++..|..|.++++|+.|+|+
T Consensus 65 ~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~ 144 (361)
T 2xot_A 65 NLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLS 144 (361)
T ss_dssp TCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred ccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECC
Confidence 456677777889999987899999999999999999876553 34999999999999889999999999999999
Q ss_pred cccccCcCCchhh---hcCCccceeccccccccCccccccccccc--cCCCCccCCCCC
Q 045127 126 YNQLSGDIPVESF---SVLANLTFLNLSYNHFSEMKVSDTKFFQR--FNSSSFLHSGLF 179 (508)
Q Consensus 126 ~N~l~g~lp~~~~---~~l~~L~~l~l~~N~l~~~~~~~~~~l~~--l~~~~~~~n~~~ 179 (508)
+|+|+ .+|...| ..+++|+.|+|++|+|++++...+..+.. +..+++.+|++.
T Consensus 145 ~N~l~-~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 145 QNQIS-RFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp SSCCC-SCCGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred CCcCC-eeCHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCcc
Confidence 99999 7886666 67999999999999999966566666665 378899999884
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.52 E-value=1e-14 Score=143.04 Aligned_cols=124 Identities=17% Similarity=0.191 Sum_probs=73.9
Q ss_pred cccCCCCCcccCCCccccCCCCCcCeEeCccCcccc-cCCc------cccEEEcccCcccCCCChhhhccCCcccccccc
Q 045127 54 CNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWK-YCPL------GIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSY 126 (508)
Q Consensus 54 ~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~-~~p~------~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~ 126 (508)
..|....|.+..++...|..+++|+.|+|++|.+++ .+|. .+++|+|++|++++..|..|..+++|++|+|++
T Consensus 129 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~ 208 (306)
T 2z66_A 129 IYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSH 208 (306)
T ss_dssp CEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTT
T ss_pred CEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCC
Confidence 334444455554444356666666666666666654 2332 336666666666666666666666666666666
Q ss_pred ccccCcCCchhhhcCCccceeccccccccCccccccccc-cccCCCCccCCCC
Q 045127 127 NQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFF-QRFNSSSFLHSGL 178 (508)
Q Consensus 127 N~l~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l-~~l~~~~~~~n~~ 178 (508)
|+++ .+|+..+..+++|+.|++++|++++..+..+..+ +++..+++.+|++
T Consensus 209 N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~ 260 (306)
T 2z66_A 209 NNFF-SLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDF 260 (306)
T ss_dssp SCCS-BCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCE
T ss_pred CccC-ccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCe
Confidence 6666 4443556666666666666666666444445555 3666666666665
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.51 E-value=1.7e-14 Score=150.60 Aligned_cols=155 Identities=16% Similarity=0.113 Sum_probs=126.3
Q ss_pred CcCCcCCCCC--ccccccCCCCCCcchhcccccccccccccCCCCCcccCCCccccCCCCCcCeEeCccCcccccCCcc-
Q 045127 18 TIMNNCIHNP--SLKYCNSSSPMDLNEIFKSTIVASHLCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCPLG- 94 (508)
Q Consensus 18 ~~~~~c~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~- 94 (508)
.+|..|.|.. ..+.|+......+|..+. ..+..|+...|.++.+++..|.++++|+.|+|++|.+++..|..
T Consensus 2 ~Cp~~C~C~~~~~~v~c~~~~l~~ip~~~~-----~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~ 76 (477)
T 2id5_A 2 GCPPRCECSAQDRAVLCHRKRFVAVPEGIP-----TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAF 76 (477)
T ss_dssp CCSTTCEEETTTTEEECCSCCCSSCCSCCC-----TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTT
T ss_pred cccCCCeECCCCCEEEeCCCCcCcCCCCCC-----CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhh
Confidence 4677777654 468898777777776543 24555666778898887768999999999999999999876744
Q ss_pred -----ccEEEcccCcccCCCChhhhccCCccccccccccccCcCCchhhhcCCccceeccccccccCccccccccccccC
Q 045127 95 -----IMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFN 169 (508)
Q Consensus 95 -----l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~ 169 (508)
|++|+|++|++++..+..|.++++|++|+|++|++++..| ..|..+++|+.|++++|+++++.+..+..+++|+
T Consensus 77 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 155 (477)
T 2id5_A 77 NNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLD-YMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLE 155 (477)
T ss_dssp TTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECT-TTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCC
T ss_pred hCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCCh-hHccccccCCEEECCCCccceeChhhccCCCCCC
Confidence 4899999999997766778999999999999999995555 8899999999999999999986667788888999
Q ss_pred CCCccCCCC
Q 045127 170 SSSFLHSGL 178 (508)
Q Consensus 170 ~~~~~~n~~ 178 (508)
.+++.+|..
T Consensus 156 ~L~l~~n~l 164 (477)
T 2id5_A 156 QLTLEKCNL 164 (477)
T ss_dssp EEEEESCCC
T ss_pred EEECCCCcC
Confidence 998888864
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=2.8e-14 Score=137.70 Aligned_cols=145 Identities=13% Similarity=0.023 Sum_probs=118.6
Q ss_pred ccccccCCCCCCcchhcccccccccccccCCCCCcccCCCccccCCCCCcCeEeCccCcccccCCc------cccEEEcc
Q 045127 28 SLKYCNSSSPMDLNEIFKSTIVASHLCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCPL------GIMSIDLS 101 (508)
Q Consensus 28 ~~~~~~~~~~~~l~~~~~~~~~~~~l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~------~l~~L~Ls 101 (508)
..+.|.......+|..+.. .+..|+...|.++.++...|.++++|+.|+|++|++++..+. .+++|+|+
T Consensus 10 ~~~~c~~~~l~~ip~~l~~-----~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~ 84 (276)
T 2z62_A 10 ITYQCMELNFYKIPDNLPF-----STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILT 84 (276)
T ss_dssp TEEECTTSCCSSCCSSSCT-----TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred ceEEecCCCccccCCCCCC-----CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECC
Confidence 3577888777777775432 455566667888888877899999999999999999876553 34899999
Q ss_pred cCcccCCCChhhhccCCccccccccccccCcCCchhhhcCCccceeccccccccCcc-ccccccccccCCCCccCCCC
Q 045127 102 NNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMK-VSDTKFFQRFNSSSFLHSGL 178 (508)
Q Consensus 102 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp~~~~~~l~~L~~l~l~~N~l~~~~-~~~~~~l~~l~~~~~~~n~~ 178 (508)
+|++++..|..|.++++|++|++++|+++ .+++..++.+++|+.|++++|+++++. +..+..+++|+.+++.+|..
T Consensus 85 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l 161 (276)
T 2z62_A 85 GNPIQSLALGAFSGLSSLQKLVAVETNLA-SLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKI 161 (276)
T ss_dssp TCCCCEECTTTTTTCTTCCEEECTTSCCC-CSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCC
T ss_pred CCccCccChhhhcCCccccEEECCCCCcc-ccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCC
Confidence 99999888888999999999999999999 555467899999999999999998753 56777889999999998865
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* | Back alignment and structure |
|---|
Probab=99.50 E-value=2.9e-14 Score=137.64 Aligned_cols=127 Identities=16% Similarity=0.113 Sum_probs=76.2
Q ss_pred cccccCCCCCcccCCCccccCCCCCcCeEeCccCcccccCC------ccccEEEcccCcccCC-CChhhhccCCcccccc
Q 045127 52 HLCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCP------LGIMSIDLSNNSLKGA-FPIDVLLCTQIQALDL 124 (508)
Q Consensus 52 ~l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p------~~l~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~l 124 (508)
.|..|....|.++.++...|.++++|+.|+|++|.+++..+ ..+++|+|++|++++. +|..|..+++|++|+|
T Consensus 77 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~L 156 (276)
T 2z62_A 77 HLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDL 156 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEEC
T ss_pred CCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEEC
Confidence 34455555566666665567777777777777777765433 2347777777777653 4677777777777777
Q ss_pred ccccccCcCCchhhhcCC---------------------------ccceeccccccccCccccccccccccCCCCccCCC
Q 045127 125 SYNQLSGDIPVESFSVLA---------------------------NLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLHSG 177 (508)
Q Consensus 125 ~~N~l~g~lp~~~~~~l~---------------------------~L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~~~n~ 177 (508)
++|+++ .+|+..+..+. +|+.|++++|+|++++...+..+++|..+++.+|+
T Consensus 157 s~N~l~-~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~ 235 (276)
T 2z62_A 157 SSNKIQ-SIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNP 235 (276)
T ss_dssp CSSCCC-EECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSCSCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSC
T ss_pred CCCCCC-cCCHHHhhhhhhccccceeeecCCCcccccCccccCCCcccEEECCCCceeecCHhHhcccccccEEEccCCc
Confidence 777776 33324444333 45555555555555333334555666666666666
Q ss_pred CC
Q 045127 178 LF 179 (508)
Q Consensus 178 ~~ 179 (508)
+.
T Consensus 236 ~~ 237 (276)
T 2z62_A 236 WD 237 (276)
T ss_dssp BC
T ss_pred cc
Confidence 53
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A | Back alignment and structure |
|---|
Probab=99.50 E-value=3.6e-14 Score=132.38 Aligned_cols=117 Identities=24% Similarity=0.266 Sum_probs=103.7
Q ss_pred CCCcccCCCccccCCCCCcCeEeCccCcccccCCc------cccEEEcccCcccCCCChhhhccCCccccccccccccCc
Q 045127 59 NPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCPL------GIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGD 132 (508)
Q Consensus 59 ~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~------~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~ 132 (508)
..+.++.+|. .+. ++|+.|+|++|+|++..|. .++.|+|++|+|++..|..|.++++|++|+|++|+|+ .
T Consensus 19 ~~~~l~~iP~-~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~-~ 94 (220)
T 2v9t_B 19 RGKGLTEIPT-NLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT-E 94 (220)
T ss_dssp TTSCCSSCCS-SCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCC-C
T ss_pred CCCCcCcCCC-ccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCC-c
Confidence 3467889997 554 6899999999999976553 3499999999999999999999999999999999999 8
Q ss_pred CCchhhhcCCccceeccccccccCccccccccccccCCCCccCCCCC
Q 045127 133 IPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLHSGLF 179 (508)
Q Consensus 133 lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~~~n~~~ 179 (508)
+|+..|..+++|+.|+|++|+|+++.+..+..+++|+.+++.+|...
T Consensus 95 l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 141 (220)
T 2v9t_B 95 LPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQ 141 (220)
T ss_dssp CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS
T ss_pred cCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCC
Confidence 88678899999999999999999977778889999999999999753
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* | Back alignment and structure |
|---|
Probab=99.50 E-value=1.9e-14 Score=149.01 Aligned_cols=129 Identities=18% Similarity=0.078 Sum_probs=109.4
Q ss_pred ccccCCCCCcccCCCccccCCCCCcCeEeCccCcccccCCc------cccEEEcccCcccCCCChhhhccCCcccccccc
Q 045127 53 LCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCPL------GIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSY 126 (508)
Q Consensus 53 l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~------~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~ 126 (508)
+..|....|.+..+++..|+.+++|+.|+|++|++++..|. .+++|+|++|++++..|..|.++++|++|+|++
T Consensus 277 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 356 (455)
T 3v47_A 277 VKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSY 356 (455)
T ss_dssp CCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCS
T ss_pred ceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCC
Confidence 44455556677776655899999999999999999987664 348999999999988899999999999999999
Q ss_pred ccccCcCCchhhhcCCccceeccccccccCccccccccccccCCCCccCCCCC-CCC
Q 045127 127 NQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLHSGLF-PGH 182 (508)
Q Consensus 127 N~l~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~~~n~~~-~c~ 182 (508)
|++++..| ..|..+++|+.|++++|+|+++++..+..+++|+.+++.+|++. .|.
T Consensus 357 N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 357 NHIRALGD-QSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp SCCCEECT-TTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CcccccCh-hhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 99996556 88999999999999999999955556688999999999999875 343
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.49 E-value=5.5e-14 Score=131.09 Aligned_cols=145 Identities=14% Similarity=0.096 Sum_probs=109.2
Q ss_pred cCCCCCCCCCCcCCcCCCCCccccccCCCCCCcchhcccc-c-ccccccccCCCCCcccCCCccccCCCCCcCeEeCccC
Q 045127 8 NLHPPPDFNSTIMNNCIHNPSLKYCNSSSPMDLNEIFKST-I-VASHLCNESKNPNCVESFPKIDLRSRPKITPLYLSFN 85 (508)
Q Consensus 8 ~l~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~l~~~~~~~-~-~~~~l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N 85 (508)
.++.+.+....+|...... +..++ +....+....... . .-..|..|....|.++.+++..|+++++|+.|+|++|
T Consensus 15 ~l~~s~n~l~~iP~~~~~~--~~~L~-L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 91 (220)
T 2v70_A 15 TVDCSNQKLNKIPEHIPQY--TAELR-LNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91 (220)
T ss_dssp EEECCSSCCSSCCSCCCTT--CSEEE-CCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EeEeCCCCcccCccCCCCC--CCEEE-cCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCC
Confidence 3445666666776654333 23333 2222222221100 0 1124666777778899999878999999999999999
Q ss_pred cccccCCc------cccEEEcccCcccCCCChhhhccCCccccccccccccCcCCchhhhcCCccceeccccccccC
Q 045127 86 FFWKYCPL------GIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSE 156 (508)
Q Consensus 86 ~l~~~~p~------~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp~~~~~~l~~L~~l~l~~N~l~~ 156 (508)
+|++..|. .+++|+|++|+|++..|..|.++++|++|+|++|+|++..| ..|..+++|+.|++++|++++
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~c 167 (220)
T 2v70_A 92 RLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAP-GAFDTLHSLSTLNLLANPFNC 167 (220)
T ss_dssp CCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCT-TTTTTCTTCCEEECCSCCEEC
T ss_pred ccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECH-HHhcCCCCCCEEEecCcCCcC
Confidence 99986653 34999999999999999999999999999999999995556 899999999999999999998
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* | Back alignment and structure |
|---|
Probab=99.49 E-value=2e-14 Score=148.89 Aligned_cols=155 Identities=13% Similarity=0.113 Sum_probs=125.2
Q ss_pred cCCcCCCCCccccccCCCCCCcchhcccccccccccccCCCCCcccCCCccccCCCCCcCeEeCccCcccccCC------
Q 045127 19 IMNNCIHNPSLKYCNSSSPMDLNEIFKSTIVASHLCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCP------ 92 (508)
Q Consensus 19 ~~~~c~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p------ 92 (508)
.|..|.+....+.|+.....++|. .. ..+..|+...|.++.+++..|+++++|++|+|++|.+.+.+|
T Consensus 4 ~~~~c~~~~~~~~c~~~~l~~lp~-l~-----~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~ 77 (455)
T 3v47_A 4 GTSECSVIGYNAICINRGLHQVPE-LP-----AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRG 77 (455)
T ss_dssp ---CCEEETTEEECCSSCCSSCCC-CC-----TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTT
T ss_pred ccceeEEEccccCcCCCCcccCCC-CC-----CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccc
Confidence 456788877788999887777776 21 356666677788888866589999999999999999976554
Q ss_pred -ccccEEEcccCcccCCCChhhhccCCccccccccccccCcCCc-hhhhcCCccceeccccccccCccccc-cccccccC
Q 045127 93 -LGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPV-ESFSVLANLTFLNLSYNHFSEMKVSD-TKFFQRFN 169 (508)
Q Consensus 93 -~~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp~-~~~~~l~~L~~l~l~~N~l~~~~~~~-~~~l~~l~ 169 (508)
..+++|+|++|++++..|..|+++++|++|+|++|++++.+|. ..|..+++|+.|++++|+++++.+.. +..+++|+
T Consensus 78 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~ 157 (455)
T 3v47_A 78 LSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFH 157 (455)
T ss_dssp CTTCCEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCC
T ss_pred cccCCEEeCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCccc
Confidence 2459999999999988899999999999999999999976551 23889999999999999999954444 77899999
Q ss_pred CCCccCCCCC
Q 045127 170 SSSFLHSGLF 179 (508)
Q Consensus 170 ~~~~~~n~~~ 179 (508)
.+++.+|...
T Consensus 158 ~L~L~~n~l~ 167 (455)
T 3v47_A 158 VLDLTFNKVK 167 (455)
T ss_dssp EEECTTCCBS
T ss_pred EEeCCCCccc
Confidence 9999998753
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.49 E-value=2e-14 Score=140.92 Aligned_cols=174 Identities=16% Similarity=0.165 Sum_probs=100.5
Q ss_pred cccccccCCCCCCCCCCcCCcCC-CCCccccccCCCCCCcchh---cccccccccccccCCCCCcccCCCccccCCCCCc
Q 045127 2 VVEDLNNLHPPPDFNSTIMNNCI-HNPSLKYCNSSSPMDLNEI---FKSTIVASHLCNESKNPNCVESFPKIDLRSRPKI 77 (508)
Q Consensus 2 ~~~~l~~l~~~~~~~~~~~~~c~-~~~~~~~~~~~~~~~l~~~---~~~~~~~~~l~~L~~~~n~~~~~p~~~~~~l~~L 77 (508)
+++.+..|+++.+....+|...+ ..+.+..++...+ .+... .........|..|+...|.+..+|. .+..+++|
T Consensus 26 ~~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n-~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~l~~-~~~~l~~L 103 (306)
T 2z66_A 26 IPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSN-GLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSS-NFLGLEQL 103 (306)
T ss_dssp CCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSS-CCCEEEEEEHHHHSCSCCCEEECCSCSEEEEEE-EEETCTTC
T ss_pred CCCCCCEEECCCCccCccCHhHhhccccCCEEECCCC-ccCcccCcccccccccccCEEECCCCccccChh-hcCCCCCC
Confidence 34577788888888777776533 2223333332111 11110 0000011244555555566666666 56677777
Q ss_pred CeEeCccCcccccCC-------ccccEEEcccCcccCCCChhhhccCCccccccccccccC-cCCchhhhcCCccceecc
Q 045127 78 TPLYLSFNFFWKYCP-------LGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSG-DIPVESFSVLANLTFLNL 149 (508)
Q Consensus 78 ~~L~L~~N~l~~~~p-------~~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g-~lp~~~~~~l~~L~~l~l 149 (508)
++|+|++|++++..+ ..+++|+|++|++++..|..|..+++|++|+|++|++++ .+| ..+..+++|+.|++
T Consensus 104 ~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~-~~~~~l~~L~~L~L 182 (306)
T 2z66_A 104 EHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLP-DIFTELRNLTFLDL 182 (306)
T ss_dssp CEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEEC-SCCTTCTTCCEEEC
T ss_pred CEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccch-hHHhhCcCCCEEEC
Confidence 777777777665332 234667777777666666666666677777777776664 345 56666666666666
Q ss_pred ccccccCccccccccccccCCCCccCCCC
Q 045127 150 SYNHFSEMKVSDTKFFQRFNSSSFLHSGL 178 (508)
Q Consensus 150 ~~N~l~~~~~~~~~~l~~l~~~~~~~n~~ 178 (508)
++|++++..+..+..+++|+.+++.+|..
T Consensus 183 s~n~l~~~~~~~~~~l~~L~~L~L~~N~l 211 (306)
T 2z66_A 183 SQCQLEQLSPTAFNSLSSLQVLNMSHNNF 211 (306)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEECTTSCC
T ss_pred CCCCcCCcCHHHhcCCCCCCEEECCCCcc
Confidence 66666664445555666666666666654
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.49 E-value=3.1e-14 Score=148.56 Aligned_cols=172 Identities=17% Similarity=0.129 Sum_probs=116.8
Q ss_pred cccccccCCCCCCCCCCcCCcCCCCCccccccCCCCCCcchhccccc-----cc-ccccccCCCCCcccCCCccccCCCC
Q 045127 2 VVEDLNNLHPPPDFNSTIMNNCIHNPSLKYCNSSSPMDLNEIFKSTI-----VA-SHLCNESKNPNCVESFPKIDLRSRP 75 (508)
Q Consensus 2 ~~~~l~~l~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~l~~~~~~~~-----~~-~~l~~L~~~~n~~~~~p~~~~~~l~ 75 (508)
+++.+..|+++.+....++...+. .|..+..+++.++..... .. ..|..|+...|.++.+|...|.+++
T Consensus 30 ~~~~l~~L~L~~n~l~~~~~~~~~-----~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 104 (477)
T 2id5_A 30 IPTETRLLDLGKNRIKTLNQDEFA-----SFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLS 104 (477)
T ss_dssp CCTTCSEEECCSSCCCEECTTTTT-----TCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCT
T ss_pred CCCCCcEEECCCCccceECHhHcc-----CCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCC
Confidence 345666677777776666544332 233333333332211111 11 1455566666778888876678888
Q ss_pred CcCeEeCccCcccccCCc------cccEEEcccCcccCCCChhhhccCCccccccccccccCcCCchhhhcCCccceecc
Q 045127 76 KITPLYLSFNFFWKYCPL------GIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNL 149 (508)
Q Consensus 76 ~L~~L~L~~N~l~~~~p~------~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp~~~~~~l~~L~~l~l 149 (508)
+|+.|+|++|++++..|. .|++|+|++|++++..|..|.++++|+.|+|++|+++ .+|+..|..+++|+.|++
T Consensus 105 ~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~l~~l~~L~~L~l 183 (477)
T 2id5_A 105 NLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLT-SIPTEALSHLHGLIVLRL 183 (477)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCS-SCCHHHHTTCTTCCEEEE
T ss_pred CCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCc-ccChhHhcccCCCcEEeC
Confidence 888888888888776553 3478888888888777888888888888888888888 666567888888888888
Q ss_pred ccccccCccccccccccccCCCCccCCCCC
Q 045127 150 SYNHFSEMKVSDTKFFQRFNSSSFLHSGLF 179 (508)
Q Consensus 150 ~~N~l~~~~~~~~~~l~~l~~~~~~~n~~~ 179 (508)
++|+++++....+..+++|+.+++.+|...
T Consensus 184 ~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~ 213 (477)
T 2id5_A 184 RHLNINAIRDYSFKRLYRLKVLEISHWPYL 213 (477)
T ss_dssp ESCCCCEECTTCSCSCTTCCEEEEECCTTC
T ss_pred CCCcCcEeChhhcccCcccceeeCCCCccc
Confidence 888888855556777777887777776543
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A | Back alignment and structure |
|---|
Probab=99.47 E-value=1.3e-13 Score=132.80 Aligned_cols=125 Identities=22% Similarity=0.200 Sum_probs=105.1
Q ss_pred cccccCCCCCcccCCCccccCCCCCcCeEeCccCcccccCCc------cccEEEcccCcccCCCChhhhccCCccccccc
Q 045127 52 HLCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCPL------GIMSIDLSNNSLKGAFPIDVLLCTQIQALDLS 125 (508)
Q Consensus 52 ~l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~------~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 125 (508)
.+..|+...|.+..++ .++.+++|++|+|++|.+++..|. .+++|+|++|++++..|..|..+++|++|+|+
T Consensus 64 ~L~~L~l~~n~l~~~~--~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 141 (272)
T 3rfs_A 64 NVRYLALGGNKLHDIS--ALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLA 141 (272)
T ss_dssp TCCEEECTTSCCCCCG--GGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCcEEECCCCCCCCch--hhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECC
Confidence 4555666667788875 699999999999999999876553 34999999999998888889999999999999
Q ss_pred cccccCcCCchhhhcCCccceeccccccccCccccccccccccCCCCccCCCCC
Q 045127 126 YNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLHSGLF 179 (508)
Q Consensus 126 ~N~l~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~~~n~~~ 179 (508)
+|+++ .+|+..|..+++|+.|++++|+++++++..+..+++|+.+++.+|...
T Consensus 142 ~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 194 (272)
T 3rfs_A 142 HNQLQ-SLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLK 194 (272)
T ss_dssp SSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS
T ss_pred CCccC-ccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCC
Confidence 99999 666577899999999999999999955555678899999999998754
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.47 E-value=1.1e-13 Score=124.41 Aligned_cols=120 Identities=18% Similarity=0.110 Sum_probs=100.7
Q ss_pred cCCCCCcccCCCccccCCCCCcCeEeCccCcccccCCc------cccEEEcccCcccCCCChhhhccCCccccccccccc
Q 045127 56 ESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCPL------GIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQL 129 (508)
Q Consensus 56 L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~------~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l 129 (508)
+....|.++.+|. .+. ++|+.|+|++|++++..+. .+++|+|++|++++..+..|..+++|++|+|++|+|
T Consensus 12 l~~~~~~l~~~p~-~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l 88 (177)
T 2o6r_A 12 IRCNSKGLTSVPT-GIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKL 88 (177)
T ss_dssp EECCSSCCSSCCT-TCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EEecCCCCccCCC-CCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCc
Confidence 3344467888886 443 6999999999999875543 349999999999987777789999999999999999
Q ss_pred cCcCCchhhhcCCccceeccccccccCccccccccccccCCCCccCCCCC
Q 045127 130 SGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLHSGLF 179 (508)
Q Consensus 130 ~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~~~n~~~ 179 (508)
+ .+|+..|..+++|+.|++++|+|++++...+..+++|..+++.+|++.
T Consensus 89 ~-~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 137 (177)
T 2o6r_A 89 Q-SLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWD 137 (177)
T ss_dssp C-CCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred c-ccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCee
Confidence 9 666578899999999999999999955555678999999999999864
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} | Back alignment and structure |
|---|
Probab=99.47 E-value=1e-13 Score=137.53 Aligned_cols=158 Identities=16% Similarity=0.219 Sum_probs=116.0
Q ss_pred CCCCCCCCcCCcCCCCCccccccCCCCCCcchhcccccccccccccCCCCCcccCCCccccCCCCCcCeEeCccCccccc
Q 045127 11 PPPDFNSTIMNNCIHNPSLKYCNSSSPMDLNEIFKSTIVASHLCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKY 90 (508)
Q Consensus 11 ~~~~~~~~~~~~c~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~ 90 (508)
+|..|...+|..|.+......|+......+|..+. ..+..|+...|.++.+++..|+++++|+.|+|++|++++.
T Consensus 19 lp~~~~~~cp~~c~c~l~~l~~~~~~l~~ip~~~~-----~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~ 93 (332)
T 2ft3_A 19 LPPTYSAMCPFGCHCHLRVVQCSDLGLKAVPKEIS-----PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKI 93 (332)
T ss_dssp ------CCCCSSCEEETTEEECCSSCCSSCCSCCC-----TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEE
T ss_pred CCCcccCCCCCCCcccCCEEECCCCCccccCCCCC-----CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCcc
Confidence 37888888888888887788888766666665442 2455566666778888766899999999999999999876
Q ss_pred CCcc------ccEEEcccCcccCCCChhhhccCCccccccccccccCcCCchhhhcCCccceeccccccccC--cccccc
Q 045127 91 CPLG------IMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSE--MKVSDT 162 (508)
Q Consensus 91 ~p~~------l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp~~~~~~l~~L~~l~l~~N~l~~--~~~~~~ 162 (508)
.|.. +++|+|++|+++ .+|..+. ++|++|++++|+++ .+|+..|..+++|+.|++++|+++. ..+..+
T Consensus 94 ~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l~~n~i~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 169 (332)
T 2ft3_A 94 HEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELRIHDNRIR-KVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAF 169 (332)
T ss_dssp CGGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEECCSSCCC-CCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSS
T ss_pred CHhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEECCCCccC-ccCHhHhCCCccCCEEECCCCccccCCCCcccc
Confidence 6643 489999999998 5666554 78999999999998 6665778889999999999998863 344555
Q ss_pred ccccccCCCCccCCCC
Q 045127 163 KFFQRFNSSSFLHSGL 178 (508)
Q Consensus 163 ~~l~~l~~~~~~~n~~ 178 (508)
..+ ++..+++.+|..
T Consensus 170 ~~l-~L~~L~l~~n~l 184 (332)
T 2ft3_A 170 DGL-KLNYLRISEAKL 184 (332)
T ss_dssp CSC-CCSCCBCCSSBC
T ss_pred cCC-ccCEEECcCCCC
Confidence 555 777777777754
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* | Back alignment and structure |
|---|
Probab=99.47 E-value=6.5e-14 Score=150.52 Aligned_cols=147 Identities=12% Similarity=0.012 Sum_probs=107.3
Q ss_pred CCccccccCCCCCCcchhcccccccccccccCCCCCcccCCCccccCCCCCcCeEeCccCcccccCCcc------ccEEE
Q 045127 26 NPSLKYCNSSSPMDLNEIFKSTIVASHLCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCPLG------IMSID 99 (508)
Q Consensus 26 ~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~------l~~L~ 99 (508)
....+.|+......+|..+. ..+..|+...|.+..+++..|+++++|++|+|++|++++..|.. +++|+
T Consensus 12 ~~~~~~c~~~~l~~ip~~~~-----~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~ 86 (606)
T 3vq2_A 12 PNITYQCMDQKLSKVPDDIP-----SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLI 86 (606)
T ss_dssp TTTEEECTTSCCSSCCTTSC-----TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEE
T ss_pred CCCceEccCCCcccCCCCCC-----CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeE
Confidence 34457788777777776443 24455566667777777767888888888888888888766643 37888
Q ss_pred cccCcccCCCChhhhccCCccccccccccccCcCCchhhhcCCccceeccccccccCc-cccccccccccCCCCccCCCC
Q 045127 100 LSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEM-KVSDTKFFQRFNSSSFLHSGL 178 (508)
Q Consensus 100 Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp~~~~~~l~~L~~l~l~~N~l~~~-~~~~~~~l~~l~~~~~~~n~~ 178 (508)
|++|++++..|..|+++++|++|+|++|+++ .+|+..|+.+++|++|++++|++++. .+..+..+++|+.+++.+|..
T Consensus 87 Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l 165 (606)
T 3vq2_A 87 LTGNPIQSFSPGSFSGLTSLENLVAVETKLA-SLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYI 165 (606)
T ss_dssp CTTCCCCCCCTTSSTTCTTCCEEECTTSCCC-CSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCC
T ss_pred CCCCcccccChhhcCCcccCCEEEccCCccc-cccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcc
Confidence 8888888777888888888888888888887 44446678888888888888888753 355677777777777777754
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} | Back alignment and structure |
|---|
Probab=99.47 E-value=1.4e-13 Score=136.69 Aligned_cols=125 Identities=18% Similarity=0.181 Sum_probs=85.6
Q ss_pred cccccCCCCCcccCCCccccCCCCCcCeEeCccCcccc--cCC--------------------------ccccEEEcccC
Q 045127 52 HLCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWK--YCP--------------------------LGIMSIDLSNN 103 (508)
Q Consensus 52 ~l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~--~~p--------------------------~~l~~L~Ls~N 103 (508)
.+..|....|.++.+|...|+++++|+.|+|++|.++. ..| ..+++|+|++|
T Consensus 124 ~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~L~~L~l~~n~l~~l~~~~~~~L~~L~l~~n 203 (332)
T 2ft3_A 124 SLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGIPKDLPETLNELHLDHN 203 (332)
T ss_dssp TCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSCCCSCCBCCSSBCSSCCSSSCSSCSCCBCCSS
T ss_pred cCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCCccCEEECcCCCCCccCccccCCCCEEECCCC
Confidence 45555566677777777568888888888888887752 222 23466677777
Q ss_pred cccCCCChhhhccCCccccccccccccCcCCchhhhcCCccceeccccccccCccccccccccccCCCCccCCCC
Q 045127 104 SLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLHSGL 178 (508)
Q Consensus 104 ~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~~~n~~ 178 (508)
++++..|..|..+++|+.|+|++|++++ +++..|..+++|+.|++++|+++. .+..+..+++|+.+++.+|..
T Consensus 204 ~i~~~~~~~l~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~~-lp~~l~~l~~L~~L~l~~N~l 276 (332)
T 2ft3_A 204 KIQAIELEDLLRYSKLYRLGLGHNQIRM-IENGSLSFLPTLRELHLDNNKLSR-VPAGLPDLKLLQVVYLHTNNI 276 (332)
T ss_dssp CCCCCCTTSSTTCTTCSCCBCCSSCCCC-CCTTGGGGCTTCCEEECCSSCCCB-CCTTGGGCTTCCEEECCSSCC
T ss_pred cCCccCHHHhcCCCCCCEEECCCCcCCc-CChhHhhCCCCCCEEECCCCcCee-cChhhhcCccCCEEECCCCCC
Confidence 7776666677777777777777777773 433667777777777777777776 555566677777777777754
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* | Back alignment and structure |
|---|
Probab=99.47 E-value=3.4e-14 Score=134.14 Aligned_cols=150 Identities=12% Similarity=0.180 Sum_probs=119.3
Q ss_pred CcCCcCCCCC-cc--ccccCCCCCCcchhcccccccccccccCCCCCcccCCCccccCCCCCcCeEeCccCc-ccccCCc
Q 045127 18 TIMNNCIHNP-SL--KYCNSSSPMDLNEIFKSTIVASHLCNESKNPNCVESFPKIDLRSRPKITPLYLSFNF-FWKYCPL 93 (508)
Q Consensus 18 ~~~~~c~~~~-~~--~~~~~~~~~~l~~~~~~~~~~~~l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~-l~~~~p~ 93 (508)
.+|..|.|.. .. +.|.. ...+|. +. ..+..|....|.++.+|+..|+++++|+.|+|++|. +++..+.
T Consensus 3 ~cp~~C~C~~~~~~~v~c~~--l~~ip~-~~-----~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~ 74 (239)
T 2xwt_C 3 CSSPPCECHQEEDFRVTCKD--IQRIPS-LP-----PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESH 74 (239)
T ss_dssp CCSSSCSEEECSTTEEEECS--CSSCCC-CC-----TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTT
T ss_pred CCCCCCeeCCCCcceeEccC--ccccCC-CC-----CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHh
Confidence 4566777754 33 34876 334554 22 245556666688999998789999999999999997 8765442
Q ss_pred ------cccEEEccc-CcccCCCChhhhccCCccccccccccccCcCCchhhhcCCccc---eeccccc-cccCcccccc
Q 045127 94 ------GIMSIDLSN-NSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLT---FLNLSYN-HFSEMKVSDT 162 (508)
Q Consensus 94 ------~l~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp~~~~~~l~~L~---~l~l~~N-~l~~~~~~~~ 162 (508)
.+++|+|++ |++++..+..|.++++|++|+|++|+++ .+| . |..+++|+ .|++++| +++++++..+
T Consensus 75 ~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~-~lp-~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~ 151 (239)
T 2xwt_C 75 SFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLK-MFP-D-LTKVYSTDIFFILEITDNPYMTSIPVNAF 151 (239)
T ss_dssp TEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCC-SCC-C-CTTCCBCCSEEEEEEESCTTCCEECTTTT
T ss_pred HcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCc-ccc-c-cccccccccccEEECCCCcchhhcCcccc
Confidence 459999998 9999877788999999999999999999 688 4 88899998 9999999 9999655668
Q ss_pred ccccccC-CCCccCCCC
Q 045127 163 KFFQRFN-SSSFLHSGL 178 (508)
Q Consensus 163 ~~l~~l~-~~~~~~n~~ 178 (508)
..+++++ .+++.+|..
T Consensus 152 ~~l~~L~~~L~l~~n~l 168 (239)
T 2xwt_C 152 QGLCNETLTLKLYNNGF 168 (239)
T ss_dssp TTTBSSEEEEECCSCCC
T ss_pred cchhcceeEEEcCCCCC
Confidence 8889999 999988865
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* | Back alignment and structure |
|---|
Probab=99.47 E-value=4.1e-14 Score=152.12 Aligned_cols=129 Identities=15% Similarity=0.019 Sum_probs=103.9
Q ss_pred cccccCCCCCcccCCCccccCCCCCcCeEeCccCccccc-CCc------cccEEEcccCcccCCCChhhhccCCcccccc
Q 045127 52 HLCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKY-CPL------GIMSIDLSNNSLKGAFPIDVLLCTQIQALDL 124 (508)
Q Consensus 52 ~l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~-~p~------~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 124 (508)
.|..|....|.+..+++..|+++++|+.|+|++|.+++. +|. .+++|+|++|++++..|..|.++++|++|+|
T Consensus 425 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 504 (606)
T 3vq2_A 425 KLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNM 504 (606)
T ss_dssp TCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred cCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEEC
Confidence 345555666667665544888999999999999998873 553 3489999999999888888999999999999
Q ss_pred ccccccCcCCchhhhcCCccceeccccccccCcccccccccc-ccCCCCccCCCCC-CCC
Q 045127 125 SYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQ-RFNSSSFLHSGLF-PGH 182 (508)
Q Consensus 125 ~~N~l~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~-~l~~~~~~~n~~~-~c~ 182 (508)
++|++++..| ..|..+++|+.|++++|+|+. .++.+..++ ++..+++.+|++. .|.
T Consensus 505 s~N~l~~~~~-~~~~~l~~L~~L~l~~N~l~~-~p~~~~~l~~~L~~l~l~~N~~~c~c~ 562 (606)
T 3vq2_A 505 SHNNLLFLDS-SHYNQLYSLSTLDCSFNRIET-SKGILQHFPKSLAFFNLTNNSVACICE 562 (606)
T ss_dssp CSSCCSCEEG-GGTTTCTTCCEEECTTSCCCC-EESCGGGSCTTCCEEECCSCCCCCSST
T ss_pred CCCcCCCcCH-HHccCCCcCCEEECCCCcCcc-cCHhHhhhcccCcEEEccCCCcccCCc
Confidence 9999996666 888999999999999999998 666677775 5899999999885 354
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A | Back alignment and structure |
|---|
Probab=99.47 E-value=8.3e-14 Score=144.34 Aligned_cols=157 Identities=13% Similarity=0.081 Sum_probs=116.6
Q ss_pred CCCcCCcCCCC--CccccccCCCCCCcchhcccccccccccccCCCCCcccCCCccccCCCCCcCeEeCccCcccccCCc
Q 045127 16 NSTIMNNCIHN--PSLKYCNSSSPMDLNEIFKSTIVASHLCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCPL 93 (508)
Q Consensus 16 ~~~~~~~c~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~ 93 (508)
...+|..|.|. ...+.|+......+|..+. ..+..|++..|.+..+++..|.++++|+.|+|++|+|++..|.
T Consensus 43 ~~~Cp~~C~C~~~~~~v~c~~~~l~~iP~~~~-----~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~ 117 (452)
T 3zyi_A 43 PQNCPSVCSCSNQFSKVVCTRRGLSEVPQGIP-----SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVG 117 (452)
T ss_dssp -CCCCTTSEECSSSCEEECCSSCCSSCCSCCC-----TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTT
T ss_pred cCCCCCCCEECCCCcEEEECCCCcCccCCCCC-----CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChh
Confidence 44567777664 3467888777777776443 2455566666788888776899999999999999999876654
Q ss_pred c------ccEEEcccCcccCCCChhhhccCCccccccccccccCcCCchhhhcCCccceecccc-ccccCcccccccccc
Q 045127 94 G------IMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSY-NHFSEMKVSDTKFFQ 166 (508)
Q Consensus 94 ~------l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp~~~~~~l~~L~~l~l~~-N~l~~~~~~~~~~l~ 166 (508)
. |++|+|++|+|++..+..|..+++|++|+|++|+++ .+|+..|..+++|+.|++++ |.++.+....+..++
T Consensus 118 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~ 196 (452)
T 3zyi_A 118 AFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIE-SIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLF 196 (452)
T ss_dssp TTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECCSCCCC-EECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCT
T ss_pred hccCcccCCEEECCCCcCCccChhhhcccCCCCEEECCCCCcc-eeCHhHHhcCCcccEEeCCCCCCccccChhhccCCC
Confidence 3 489999999999777777889999999999999998 67656777788888888877 455553333466677
Q ss_pred ccCCCCccCCCC
Q 045127 167 RFNSSSFLHSGL 178 (508)
Q Consensus 167 ~l~~~~~~~n~~ 178 (508)
+|+.+++.+|..
T Consensus 197 ~L~~L~L~~n~l 208 (452)
T 3zyi_A 197 NLKYLNLGMCNI 208 (452)
T ss_dssp TCCEEECTTSCC
T ss_pred CCCEEECCCCcc
Confidence 777777777654
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* | Back alignment and structure |
|---|
Probab=99.46 E-value=6.3e-14 Score=150.62 Aligned_cols=153 Identities=14% Similarity=0.086 Sum_probs=123.4
Q ss_pred CCcCCCC--CccccccCCCCCCcchhcccccccccccccCCCCCcccCCCccccCCCCCcCeEeCccCcccccCCccc--
Q 045127 20 MNNCIHN--PSLKYCNSSSPMDLNEIFKSTIVASHLCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCPLGI-- 95 (508)
Q Consensus 20 ~~~c~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~l-- 95 (508)
+..|.+. ...+.|+......+|..+.. .+..|+...|.++.+++.+|+++++|++|+|++|++++..|..|
T Consensus 5 ~~~C~~~~~~~~~~c~~~~l~~iP~~l~~-----~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~ 79 (606)
T 3t6q_A 5 DQKCIEKEVNKTYNCENLGLNEIPGTLPN-----STECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQS 79 (606)
T ss_dssp -CCCEEEETTTEEECTTSCCSSCCTTSCT-----TCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTT
T ss_pred cCceecccCCceEECCCCCcccCcCCCCC-----cCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccC
Confidence 3445443 45677988877788865533 45556666788888876689999999999999999998777544
Q ss_pred ----cEEEcccCcccCCCChhhhccCCccccccccccccCcCCchhhhcCCccceeccccccccCccccccccccccCCC
Q 045127 96 ----MSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSS 171 (508)
Q Consensus 96 ----~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~~~ 171 (508)
++|+|++|++++..|..|+++++|++|+|++|+++ .+++..|+.+++|++|++++|+++++..+.+..+++|+.+
T Consensus 80 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~-~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 158 (606)
T 3t6q_A 80 QHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGIS-SIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVL 158 (606)
T ss_dssp CTTCCEEECTTCCCSEECTTTTSSCTTCCEEECTTSCCS-CGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEE
T ss_pred ccccCeeeCCCCcccccChhhhcccccccEeeccccCcc-cCCcchhccCCcccEEECCCCcccccCcccccCCcccCEE
Confidence 89999999999888999999999999999999999 5543778999999999999999998666777678888888
Q ss_pred CccCCCC
Q 045127 172 SFLHSGL 178 (508)
Q Consensus 172 ~~~~n~~ 178 (508)
++.+|..
T Consensus 159 ~L~~n~l 165 (606)
T 3t6q_A 159 DFQNNAI 165 (606)
T ss_dssp ECCSSCC
T ss_pred EcccCcc
Confidence 8888865
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A | Back alignment and structure |
|---|
Probab=99.46 E-value=5.6e-14 Score=125.03 Aligned_cols=124 Identities=15% Similarity=0.060 Sum_probs=105.0
Q ss_pred ccccccCCCCCccc--CCCccccCCCCCcCeEeCccCcccccCC-----ccccEEEcccCcccCCCChhhhccCCccccc
Q 045127 51 SHLCNESKNPNCVE--SFPKIDLRSRPKITPLYLSFNFFWKYCP-----LGIMSIDLSNNSLKGAFPIDVLLCTQIQALD 123 (508)
Q Consensus 51 ~~l~~L~~~~n~~~--~~p~~~~~~l~~L~~L~L~~N~l~~~~p-----~~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 123 (508)
..+..|....|.+. .+|. .+..+++|+.|+|++|.+++. + ..+++|+|++|++++.+|..+..+++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~-~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEG-LTAEFVNLEFLSLINVGLISV-SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSS-CCGGGGGCCEEEEESSCCCCC-SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHH-HHHhCCCCCEEeCcCCCCCCh-hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 35566667777787 8987 789999999999999999875 2 3459999999999988898888999999999
Q ss_pred cccccccCcCCc-hhhhcCCccceeccccccccCcccc----ccccccccCCCCccCCCC
Q 045127 124 LSYNQLSGDIPV-ESFSVLANLTFLNLSYNHFSEMKVS----DTKFFQRFNSSSFLHSGL 178 (508)
Q Consensus 124 l~~N~l~g~lp~-~~~~~l~~L~~l~l~~N~l~~~~~~----~~~~l~~l~~~~~~~n~~ 178 (508)
|++|+++ .+|. ..+..+++|+.|++++|++++ .++ .+..+++|..+++.+|..
T Consensus 102 Ls~N~l~-~~~~~~~l~~l~~L~~L~l~~N~l~~-~~~~~~~~~~~l~~L~~L~l~~n~~ 159 (168)
T 2ell_A 102 LSGNKLK-DISTLEPLKKLECLKSLDLFNCEVTN-LNDYRESVFKLLPQLTYLDGYDRED 159 (168)
T ss_dssp CBSSSCC-SSGGGGGGSSCSCCCEEECCSSGGGT-STTHHHHHHTTCSSCCEETTEETTS
T ss_pred ccCCccC-cchhHHHHhcCCCCCEEEeeCCcCcc-hHHHHHHHHHhCccCcEecCCCCCh
Confidence 9999999 5542 578899999999999999999 554 677889999999888865
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.45 E-value=1.1e-13 Score=142.86 Aligned_cols=157 Identities=15% Similarity=0.131 Sum_probs=109.7
Q ss_pred CCCcCCcCCCCC--ccccccCCCCCCcchhcccccccccccccCCCCCcccCCCccccCCCCCcCeEeCccCcccccCCc
Q 045127 16 NSTIMNNCIHNP--SLKYCNSSSPMDLNEIFKSTIVASHLCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCPL 93 (508)
Q Consensus 16 ~~~~~~~c~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~ 93 (508)
...+|..|.|.. ..+.|.......+|..+.. .+..|++..|.+..++...|.++++|+.|+|++|.|++..|.
T Consensus 32 ~~~Cp~~C~C~~~~~~v~c~~~~l~~iP~~~~~-----~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~ 106 (440)
T 3zyj_A 32 AQTCPSVCSCSNQFSKVICVRKNLREVPDGIST-----NTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIG 106 (440)
T ss_dssp -CCCCSSSEECTTSCEEECCSCCCSSCCSCCCT-----TCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGG
T ss_pred cccCCCCCEeCCCCCEEEeCCCCcCcCCCCCCC-----CCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChh
Confidence 355677776653 4678888777777765532 344455556778888766888888888888888888765543
Q ss_pred ------cccEEEcccCcccCCCChhhhccCCccccccccccccCcCCchhhhcCCccceecccc-ccccCcccccccccc
Q 045127 94 ------GIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSY-NHFSEMKVSDTKFFQ 166 (508)
Q Consensus 94 ------~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp~~~~~~l~~L~~l~l~~-N~l~~~~~~~~~~l~ 166 (508)
.|++|+|++|+|++..+..|..+++|++|+|++|+++ .+|+..|..+++|+.|++++ |.++.+....+..++
T Consensus 107 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~ 185 (440)
T 3zyj_A 107 AFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIE-SIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLS 185 (440)
T ss_dssp GGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCC-EECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCS
T ss_pred hccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCCCCccc-ccCHHHhhhCcccCEeCCCCCCCcceeCcchhhccc
Confidence 3488888888888666667888888888888888888 66656777777777777777 444443333456666
Q ss_pred ccCCCCccCCCC
Q 045127 167 RFNSSSFLHSGL 178 (508)
Q Consensus 167 ~l~~~~~~~n~~ 178 (508)
+|+.+++.+|..
T Consensus 186 ~L~~L~L~~n~l 197 (440)
T 3zyj_A 186 NLRYLNLAMCNL 197 (440)
T ss_dssp SCCEEECTTSCC
T ss_pred ccCeecCCCCcC
Confidence 677666666644
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* | Back alignment and structure |
|---|
Probab=99.45 E-value=1.1e-13 Score=150.86 Aligned_cols=150 Identities=19% Similarity=0.274 Sum_probs=106.0
Q ss_pred CCCCCccccccCCCCCCcchhcccccccccccccCCCCCcccCCCccccCCCCCcCeEeCccCcccccCCcc------cc
Q 045127 23 CIHNPSLKYCNSSSPMDLNEIFKSTIVASHLCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCPLG------IM 96 (508)
Q Consensus 23 c~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~------l~ 96 (508)
|.+..+.+.|+......+|..+. ..+..|+...|.++.+|+..|+++++|++|+|++|.+++..|.. ++
T Consensus 2 C~~~~~~~~cs~~~L~~ip~~~~-----~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 76 (680)
T 1ziw_A 2 CTVSHEVADCSHLKLTQVPDDLP-----TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLK 76 (680)
T ss_dssp --CBSSEEECCSSCCSSCCSCSC-----TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCC
T ss_pred ceeECCeeECCCCCccccccccC-----CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcC
Confidence 45555677787766666665432 24555566667777787767888888888888888887766643 47
Q ss_pred EEEcccCcccCCCChhhhccCCccccccccccccCcCCchhhhcCCccceeccccccccCccccccccccccCCCCccCC
Q 045127 97 SIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLHS 176 (508)
Q Consensus 97 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~~~n 176 (508)
+|+|++|++++..+..|+++++|++|+|++|+++ .+|+..|+.+++|++|++++|++++..+..+..+++|+.+++.+|
T Consensus 77 ~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n 155 (680)
T 1ziw_A 77 VLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQ-KIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNN 155 (680)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCC-CCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSS
T ss_pred EEECCCCccCccChhhhccCCCCCEEECCCCccC-ccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCC
Confidence 8888888888655556888888888888888887 455467788888888888888888755555666777777777766
Q ss_pred CC
Q 045127 177 GL 178 (508)
Q Consensus 177 ~~ 178 (508)
..
T Consensus 156 ~l 157 (680)
T 1ziw_A 156 KI 157 (680)
T ss_dssp CC
T ss_pred cc
Confidence 43
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A | Back alignment and structure |
|---|
Probab=99.45 E-value=7e-14 Score=121.79 Aligned_cols=120 Identities=14% Similarity=0.101 Sum_probs=99.3
Q ss_pred cccccCCCCCccc--CCCccccCCCCCcCeEeCccCcccccCC-----ccccEEEcccCcccCCCChhhhccCCcccccc
Q 045127 52 HLCNESKNPNCVE--SFPKIDLRSRPKITPLYLSFNFFWKYCP-----LGIMSIDLSNNSLKGAFPIDVLLCTQIQALDL 124 (508)
Q Consensus 52 ~l~~L~~~~n~~~--~~p~~~~~~l~~L~~L~L~~N~l~~~~p-----~~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 124 (508)
.+..|....|.+. .+|. .++.+++|+.|+|++|.+++. + ..+++|+|++|++++.+|..+..+++|++|++
T Consensus 18 ~l~~L~l~~n~l~~~~~~~-~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l 95 (149)
T 2je0_A 18 DVKELVLDNSRSNEGKLEG-LTDEFEELEFLSTINVGLTSI-ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNL 95 (149)
T ss_dssp GCSEEECTTCBCBTTBCCS-CCTTCTTCCEEECTTSCCCCC-TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEEC
T ss_pred cCeEEEccCCcCChhHHHH-HHhhcCCCcEEECcCCCCCCc-hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEEC
Confidence 4555666667787 8887 889999999999999999875 2 35699999999999878988889999999999
Q ss_pred ccccccCc-CCchhhhcCCccceeccccccccCccc---cccccccccCCCCcc
Q 045127 125 SYNQLSGD-IPVESFSVLANLTFLNLSYNHFSEMKV---SDTKFFQRFNSSSFL 174 (508)
Q Consensus 125 ~~N~l~g~-lp~~~~~~l~~L~~l~l~~N~l~~~~~---~~~~~l~~l~~~~~~ 174 (508)
++|++++. .| ..+..+++|+.|++++|++++.++ ..+..+++|+.+++.
T Consensus 96 s~N~i~~~~~~-~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 96 SGNKIKDLSTI-EPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp TTSCCCSHHHH-GGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCCcCCChHHH-HHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 99999952 33 678999999999999999999433 256777888777654
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.45 E-value=2e-13 Score=128.11 Aligned_cols=116 Identities=23% Similarity=0.199 Sum_probs=101.5
Q ss_pred CCCcccCCCccccCCCCCcCeEeCccCcccccCCcc------ccEEEcccCcccCCCChhhhccCCccccccccccccCc
Q 045127 59 NPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCPLG------IMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGD 132 (508)
Q Consensus 59 ~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~------l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~ 132 (508)
..+.++.+|. .+. ++|+.|+|++|+|++..|.. +++|+|++|+|++..+..|..+++|++|+|++|+|+ .
T Consensus 27 ~~~~l~~ip~-~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~-~ 102 (229)
T 3e6j_A 27 RSKRHASVPA-GIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLT-V 102 (229)
T ss_dssp TTSCCSSCCS-CCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-C
T ss_pred cCCCcCccCC-CCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCC-c
Confidence 3467889997 554 89999999999999876644 499999999999776777899999999999999999 6
Q ss_pred CCchhhhcCCccceeccccccccCccccccccccccCCCCccCCCCC
Q 045127 133 IPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLHSGLF 179 (508)
Q Consensus 133 lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~~~n~~~ 179 (508)
+|+..|..+++|+.|+|++|+|+. .+..+..+++|..+++.+|...
T Consensus 103 l~~~~~~~l~~L~~L~Ls~N~l~~-lp~~~~~l~~L~~L~L~~N~l~ 148 (229)
T 3e6j_A 103 LPSAVFDRLVHLKELFMCCNKLTE-LPRGIERLTHLTHLALDQNQLK 148 (229)
T ss_dssp CCTTTTTTCTTCCEEECCSSCCCS-CCTTGGGCTTCSEEECCSSCCC
T ss_pred cChhHhCcchhhCeEeccCCcccc-cCcccccCCCCCEEECCCCcCC
Confidence 765788999999999999999998 7778888999999999999753
|
| >3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D | Back alignment and structure |
|---|
Probab=99.44 E-value=1.2e-13 Score=123.37 Aligned_cols=100 Identities=23% Similarity=0.200 Sum_probs=55.6
Q ss_pred CeEeCccCccccc---CCccccEEEcccCcccCCCChhhhccCCccccccccccccCcCCchhhhcCCccceeccccccc
Q 045127 78 TPLYLSFNFFWKY---CPLGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHF 154 (508)
Q Consensus 78 ~~L~L~~N~l~~~---~p~~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp~~~~~~l~~L~~l~l~~N~l 154 (508)
+.|++++|.++.. +|..+++|+|++|+|++..|..|.++++|++|+|++|+|+ .+|+..|..+++|+.|+|++|+|
T Consensus 12 ~~l~~s~n~l~~ip~~~~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~f~~l~~L~~L~L~~N~l 90 (170)
T 3g39_A 12 TTVDCSGKSLASVPTGIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLT-VLPAGVFDKLTQLTQLSLNDNQL 90 (170)
T ss_dssp TEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCC
T ss_pred CEEEeCCCCcCccCccCCCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcC-ccChhhccCCCCCCEEECCCCcc
Confidence 4455555555431 1233455555555555555555666666666666666666 44435555666666666666666
Q ss_pred cCccccccccccccCCCCccCCCC
Q 045127 155 SEMKVSDTKFFQRFNSSSFLHSGL 178 (508)
Q Consensus 155 ~~~~~~~~~~l~~l~~~~~~~n~~ 178 (508)
+++++..+..+++|+.+++.+|++
T Consensus 91 ~~~~~~~~~~l~~L~~L~L~~N~~ 114 (170)
T 3g39_A 91 KSIPRGAFDNLKSLTHIWLLNNPW 114 (170)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCB
T ss_pred CEeCHHHhcCCCCCCEEEeCCCCC
Confidence 663333455556666666666655
|
| >4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=1.1e-13 Score=149.09 Aligned_cols=128 Identities=16% Similarity=0.176 Sum_probs=108.1
Q ss_pred cccCCCCCcccCCCccccCCCCCcCeEeCccCcccc-cCCc------cccEEEcccCcccCCCChhhhccCCcccccccc
Q 045127 54 CNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWK-YCPL------GIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSY 126 (508)
Q Consensus 54 ~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~-~~p~------~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~ 126 (508)
..+....|.+..+++..+..+++|+.|+|++|++.. .+|. .+++|+|++|+|++..|..|.++++|++|+|++
T Consensus 448 ~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~ 527 (635)
T 4g8a_A 448 IYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSH 527 (635)
T ss_dssp CEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTT
T ss_pred ccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCC
Confidence 344455577777777689999999999999998554 3443 459999999999999999999999999999999
Q ss_pred ccccCcCCchhhhcCCccceeccccccccCccccccccc-cccCCCCccCCCCC-CCC
Q 045127 127 NQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFF-QRFNSSSFLHSGLF-PGH 182 (508)
Q Consensus 127 N~l~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l-~~l~~~~~~~n~~~-~c~ 182 (508)
|+|+ .+|+..|..+++|+.|+|++|+|+++++..+..+ ++|+.+++.+|++. .|.
T Consensus 528 N~l~-~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~ 584 (635)
T 4g8a_A 528 NNFF-SLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCE 584 (635)
T ss_dssp SCCC-BCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGG
T ss_pred CcCC-CCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCC
Confidence 9999 5555889999999999999999999666677776 68999999999985 565
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* | Back alignment and structure |
|---|
Probab=99.44 E-value=2.3e-14 Score=135.37 Aligned_cols=124 Identities=10% Similarity=0.008 Sum_probs=87.9
Q ss_pred cccccCCCC-CcccCCCccccCCCCCcCeEeCccCcccccCCc-----ccc---EEEcccC-cccCCCChhhhccCCcc-
Q 045127 52 HLCNESKNP-NCVESFPKIDLRSRPKITPLYLSFNFFWKYCPL-----GIM---SIDLSNN-SLKGAFPIDVLLCTQIQ- 120 (508)
Q Consensus 52 ~l~~L~~~~-n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~-----~l~---~L~Ls~N-~l~~~~p~~~~~l~~L~- 120 (508)
.|..|.... |.++.+|...|.++++|+.|+|++|.+++ +|. .++ +|+|++| ++++..+..|.++++|+
T Consensus 81 ~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~ 159 (239)
T 2xwt_C 81 KVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPDLTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETL 159 (239)
T ss_dssp TCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCCCTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEE
T ss_pred CCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccccccccccccccEEECCCCcchhhcCcccccchhccee
Confidence 344455554 66777776577778888888888887776 553 234 7888888 77766666678888888
Q ss_pred ccccccccccCcCCchhhhcCCccceecccccc-ccCccccccccc-cccCCCCccCCCC
Q 045127 121 ALDLSYNQLSGDIPVESFSVLANLTFLNLSYNH-FSEMKVSDTKFF-QRFNSSSFLHSGL 178 (508)
Q Consensus 121 ~L~l~~N~l~g~lp~~~~~~l~~L~~l~l~~N~-l~~~~~~~~~~l-~~l~~~~~~~n~~ 178 (508)
+|++++|+++ .+|...|.. ++|+.|++++|+ ++++++..+..+ ++|+.+++.+|..
T Consensus 160 ~L~l~~n~l~-~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l 217 (239)
T 2xwt_C 160 TLKLYNNGFT-SVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSV 217 (239)
T ss_dssp EEECCSCCCC-EECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCC
T ss_pred EEEcCCCCCc-ccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCcc
Confidence 8888888887 777555555 778888888884 877555556667 7777777777754
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=3.2e-13 Score=133.86 Aligned_cols=106 Identities=13% Similarity=0.138 Sum_probs=78.1
Q ss_pred ccCCCCCcCeEeCccCcccccCC----ccccEEEcccCcccCCCChhhhccCCccccccccccccCcCCchhhhcCCccc
Q 045127 70 DLRSRPKITPLYLSFNFFWKYCP----LGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLT 145 (508)
Q Consensus 70 ~~~~l~~L~~L~L~~N~l~~~~p----~~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp~~~~~~l~~L~ 145 (508)
.|.++++|+.|++++|.++. +| ..+++|+|++|++++..|..|..+++|++|+|++|++++..| ..+..+++|+
T Consensus 166 ~~~~l~~L~~L~l~~n~l~~-l~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~-~~~~~l~~L~ 243 (330)
T 1xku_A 166 AFQGMKKLSYIRIADTNITT-IPQGLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDN-GSLANTPHLR 243 (330)
T ss_dssp GGGGCTTCCEEECCSSCCCS-CCSSCCTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECT-TTGGGSTTCC
T ss_pred hccCCCCcCEEECCCCcccc-CCccccccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeCh-hhccCCCCCC
Confidence 45556666666666666553 33 455788888888887777888888888888888888884433 6788888888
Q ss_pred eeccccccccCccccccccccccCCCCccCCCC
Q 045127 146 FLNLSYNHFSEMKVSDTKFFQRFNSSSFLHSGL 178 (508)
Q Consensus 146 ~l~l~~N~l~~~~~~~~~~l~~l~~~~~~~n~~ 178 (508)
.|++++|+++. .+..+..+++|..+++.+|..
T Consensus 244 ~L~L~~N~l~~-lp~~l~~l~~L~~L~l~~N~i 275 (330)
T 1xku_A 244 ELHLNNNKLVK-VPGGLADHKYIQVVYLHNNNI 275 (330)
T ss_dssp EEECCSSCCSS-CCTTTTTCSSCCEEECCSSCC
T ss_pred EEECCCCcCcc-CChhhccCCCcCEEECCCCcC
Confidence 88888888887 666677778888888888765
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.44 E-value=3.2e-13 Score=124.58 Aligned_cols=107 Identities=23% Similarity=0.188 Sum_probs=91.5
Q ss_pred cccccCCCCCcccCCCccccCCCCCcCeEeCccCcccccCCc------cccEEEcccCcccCCCChhhhccCCccccccc
Q 045127 52 HLCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCPL------GIMSIDLSNNSLKGAFPIDVLLCTQIQALDLS 125 (508)
Q Consensus 52 ~l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~------~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 125 (508)
.|..|....|.++.+|...|..+++|++|+|++|+|++..+. .+++|+|++|++++..+..|..+++|++|+|+
T Consensus 53 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 132 (208)
T 2o6s_A 53 SLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLY 132 (208)
T ss_dssp TCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred cCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECC
Confidence 456667777889999986789999999999999999875543 34999999999998777778999999999999
Q ss_pred cccccCcCCchhhhcCCccceeccccccccCcccc
Q 045127 126 YNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVS 160 (508)
Q Consensus 126 ~N~l~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~ 160 (508)
+|+++ .+|+..|..+++|+.|++++|.+.+ ..+
T Consensus 133 ~N~l~-~~~~~~~~~l~~L~~L~l~~N~~~~-~~~ 165 (208)
T 2o6s_A 133 QNQLK-SVPDGVFDRLTSLQYIWLHDNPWDC-TCP 165 (208)
T ss_dssp SSCCS-CCCTTTTTTCTTCCEEECCSCCBCC-CTT
T ss_pred CCccc-eeCHHHhccCCCccEEEecCCCeec-CCC
Confidence 99999 6665778999999999999999988 443
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* | Back alignment and structure |
|---|
Probab=99.42 E-value=2.9e-13 Score=147.55 Aligned_cols=130 Identities=17% Similarity=0.159 Sum_probs=105.5
Q ss_pred cccccCCCCCcccCCCccccCCCCCcCeEeCccCcccccC----C----------ccccEEEcccCcccCCCChhhhccC
Q 045127 52 HLCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYC----P----------LGIMSIDLSNNSLKGAFPIDVLLCT 117 (508)
Q Consensus 52 ~l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~----p----------~~l~~L~Ls~N~l~~~~p~~~~~l~ 117 (508)
.|..|+...|.++.+|+..|.++++|+.|+|++|++++.. | ..+++|+|++|+++...+..|.+++
T Consensus 481 ~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~ 560 (680)
T 1ziw_A 481 NLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLF 560 (680)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred CCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHccccc
Confidence 3555666678888888867999999999999999987631 1 3458999999999955555789999
Q ss_pred CccccccccccccCcCCchhhhcCCccceeccccccccCccccccc-cccccCCCCccCCCCC-CCC
Q 045127 118 QIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTK-FFQRFNSSSFLHSGLF-PGH 182 (508)
Q Consensus 118 ~L~~L~l~~N~l~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~-~l~~l~~~~~~~n~~~-~c~ 182 (508)
+|+.|+|++|+++ .+|+..|..+++|+.|++++|+|+++++..+. .++++..+++.+|++. .|.
T Consensus 561 ~L~~L~Ls~N~l~-~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~ 626 (680)
T 1ziw_A 561 ELKIIDLGLNNLN-TLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCE 626 (680)
T ss_dssp TCCEEECCSSCCC-CCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCC
T ss_pred CcceeECCCCCCC-cCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCc
Confidence 9999999999999 77767888999999999999999995555555 6888999999999985 464
|
| >2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.42 E-value=2.5e-13 Score=121.76 Aligned_cols=96 Identities=22% Similarity=0.239 Sum_probs=47.7
Q ss_pred CcccCCCccccCCCCCcCeEeCccCcccccCCccccEEEcccCcccCCCChhhhccCCccccccccccccCcCCchhhhc
Q 045127 61 NCVESFPKIDLRSRPKITPLYLSFNFFWKYCPLGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSV 140 (508)
Q Consensus 61 n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp~~~~~~ 140 (508)
|.++.+|. .+. ++|+.|+|++|+|++ ..|..|.++++|++|+|++|+|+ .+|+..|..
T Consensus 22 n~l~~iP~-~~~--~~L~~L~Ls~N~l~~------------------~~~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~ 79 (174)
T 2r9u_A 22 IRLASVPA-GIP--TDKQRLWLNNNQITK------------------LEPGVFDHLVNLQQLYFNSNKLT-AIPTGVFDK 79 (174)
T ss_dssp SCCSSCCS-CCC--TTCSEEECCSSCCCC------------------CCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTT
T ss_pred CCCCccCC-CcC--CCCcEEEeCCCCccc------------------cCHHHhcCCcCCCEEECCCCCCC-ccChhHhCC
Confidence 45566665 332 455555555555554 44444555555555555555555 344344445
Q ss_pred CCccceeccccccccCccccccccccccCCCCccCCCC
Q 045127 141 LANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLHSGL 178 (508)
Q Consensus 141 l~~L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~~~n~~ 178 (508)
+++|+.|+|++|+|+++++..+..+++|..+++.+|++
T Consensus 80 l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~~ 117 (174)
T 2r9u_A 80 LTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIYLYNNPW 117 (174)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCB
T ss_pred cchhhEEECCCCccceeCHHHhccccCCCEEEeCCCCc
Confidence 55555555555555552222244455555555555544
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} | Back alignment and structure |
|---|
Probab=99.42 E-value=7.2e-14 Score=151.09 Aligned_cols=114 Identities=13% Similarity=0.245 Sum_probs=91.1
Q ss_pred cccCCCccccCCCCCcCeEeCccCccccc-----------------CCcc--------ccEEEcccCcccCCCChhhhcc
Q 045127 62 CVESFPKIDLRSRPKITPLYLSFNFFWKY-----------------CPLG--------IMSIDLSNNSLKGAFPIDVLLC 116 (508)
Q Consensus 62 ~~~~~p~~~~~~l~~L~~L~L~~N~l~~~-----------------~p~~--------l~~L~Ls~N~l~~~~p~~~~~l 116 (508)
.++.||+ +|+++++|++|+|++|.|++. +|.. +++|+|++|++.+.+|..|+++
T Consensus 194 ~l~~ip~-~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l 272 (636)
T 4eco_A 194 NITFVSK-AVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKAL 272 (636)
T ss_dssp EEEEECG-GGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTC
T ss_pred CCccCCH-HHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcC
Confidence 4555887 788888999999999988885 6643 3688888888888888888888
Q ss_pred CCcccccccccc-ccC-cCCchhhhcC------CccceeccccccccCcccc--ccccccccCCCCccCCCC
Q 045127 117 TQIQALDLSYNQ-LSG-DIPVESFSVL------ANLTFLNLSYNHFSEMKVS--DTKFFQRFNSSSFLHSGL 178 (508)
Q Consensus 117 ~~L~~L~l~~N~-l~g-~lp~~~~~~l------~~L~~l~l~~N~l~~~~~~--~~~~l~~l~~~~~~~n~~ 178 (508)
++|++|+|++|+ ++| .+| ..++.+ ++|+.|++++|+++. .+. .+..+++|+.+++.+|..
T Consensus 273 ~~L~~L~Ls~n~~l~~~~lp-~~~~~L~~~~~l~~L~~L~L~~n~l~~-ip~~~~l~~l~~L~~L~L~~N~l 342 (636)
T 4eco_A 273 PEMQLINVACNRGISGEQLK-DDWQALADAPVGEKIQIIYIGYNNLKT-FPVETSLQKMKKLGMLECLYNQL 342 (636)
T ss_dssp SSCCEEECTTCTTSCHHHHH-HHHHHHHHSGGGGTCCEEECCSSCCSS-CCCHHHHTTCTTCCEEECCSCCC
T ss_pred CCCCEEECcCCCCCccccch-HHHHhhhccccCCCCCEEECCCCcCCc-cCchhhhccCCCCCEEeCcCCcC
Confidence 888888888888 887 788 667666 888888888888886 555 677788888888877764
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.41 E-value=3.6e-13 Score=144.60 Aligned_cols=64 Identities=20% Similarity=0.190 Sum_probs=34.4
Q ss_pred hhhccCCccccccccccccCcCCchhhhcCCccceeccccccccCccccccccccccCCCCccCCC
Q 045127 112 DVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLHSG 177 (508)
Q Consensus 112 ~~~~l~~L~~L~l~~N~l~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~~~n~ 177 (508)
.+..+++|+.|+|++|.+++.+| ..|+.+++|+.|+|++|+|++ .+.....+++|..+++.+|.
T Consensus 249 ~l~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~ 312 (597)
T 3oja_B 249 WLLNYPGLVEVDLSYNELEKIMY-HPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNH 312 (597)
T ss_dssp GGGGCTTCSEEECCSSCCCEEES-GGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSC
T ss_pred hhccCCCCCEEECCCCccCCCCH-HHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCC
Confidence 34455555555555555554444 555555555555555555555 34444445555555555554
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* | Back alignment and structure |
|---|
Probab=99.41 E-value=2.1e-13 Score=146.58 Aligned_cols=126 Identities=21% Similarity=0.124 Sum_probs=99.1
Q ss_pred cccccCCCCCcccCCCccccCCCCCcCeEeCccCccccc-CC--------ccccEEEcccCcccCCCChhhhccCCcccc
Q 045127 52 HLCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKY-CP--------LGIMSIDLSNNSLKGAFPIDVLLCTQIQAL 122 (508)
Q Consensus 52 ~l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~-~p--------~~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L 122 (508)
.|..|....|.+..+++..|+.+++|+.|+|++|.+++. +| ..+++|+|++|++++..|..|..+++|++|
T Consensus 426 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 505 (606)
T 3t6q_A 426 LLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHV 505 (606)
T ss_dssp TCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred cCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEE
Confidence 345555566677766655788888888888888888752 11 345888999998888888888888999999
Q ss_pred ccccccccCcCCchhhhcCCccceeccccccccCccccccccccccCCCCccCCCCC
Q 045127 123 DLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLHSGLF 179 (508)
Q Consensus 123 ~l~~N~l~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~~~n~~~ 179 (508)
+|++|++++..| ..+..+++| .|++++|++++.++..+..+++++.+++.+|++.
T Consensus 506 ~Ls~N~l~~~~~-~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 560 (606)
T 3t6q_A 506 DLSHNRLTSSSI-EALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLD 560 (606)
T ss_dssp ECCSSCCCGGGG-GGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEE
T ss_pred ECCCCccCcCCh-hHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCcc
Confidence 999999986666 888888888 8999999999855556777888888999999874
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.41 E-value=2.7e-13 Score=124.00 Aligned_cols=120 Identities=14% Similarity=0.209 Sum_probs=86.4
Q ss_pred cccccCCCCCcccCCCccccCCCCCcCeEeCccCcccccCCc------cccEEEcccCcccCCCChhhhccCCccccccc
Q 045127 52 HLCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCPL------GIMSIDLSNNSLKGAFPIDVLLCTQIQALDLS 125 (508)
Q Consensus 52 ~l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~------~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 125 (508)
.+..|....|.+..++ .+..+++|++|+|++|++++..|. .+++|+|++|++++..|..++.+++|++|+|+
T Consensus 67 ~L~~L~l~~n~~~~~~--~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~ 144 (197)
T 4ezg_A 67 NIKDLTINNIHATNYN--PISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLS 144 (197)
T ss_dssp TCSEEEEESCCCSCCG--GGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECC
T ss_pred CCCEEEccCCCCCcch--hhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEcc
Confidence 3444444455565554 577888888888888888764443 34788888888887777788888888888888
Q ss_pred ccc-ccCcCCchhhhcCCccceeccccccccCccccccccccccCCCCccCCCC
Q 045127 126 YNQ-LSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLHSGL 178 (508)
Q Consensus 126 ~N~-l~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~~~n~~ 178 (508)
+|+ ++ .+| .+..+++|+.|++++|++++ .+ .+..+++|+.+++.+|+.
T Consensus 145 ~n~~i~-~~~--~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N~i 193 (197)
T 4ezg_A 145 YNGAIT-DIM--PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQTI 193 (197)
T ss_dssp SCTBCC-CCG--GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC--
T ss_pred CCCCcc-ccH--hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCccc
Confidence 887 55 666 47778888888888888887 33 566777888888887753
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 | Back alignment and structure |
|---|
Probab=99.41 E-value=3.7e-13 Score=132.14 Aligned_cols=118 Identities=17% Similarity=0.188 Sum_probs=75.6
Q ss_pred cccccCCCCCcccCCCccccCCCCCcCeEeCccCcccccCC----ccccEEEcccCcccCCCChhhhccCCccccccccc
Q 045127 52 HLCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCP----LGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYN 127 (508)
Q Consensus 52 ~l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p----~~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N 127 (508)
.|..|+...|.++.++ .+..+++|+.|+|++|++++..+ ..+++|+|++|++++..+ +..+++|++|+|++|
T Consensus 86 ~L~~L~L~~n~l~~~~--~~~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n 161 (308)
T 1h6u_A 86 KITELELSGNPLKNVS--AIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNA 161 (308)
T ss_dssp SCCEEECCSCCCSCCG--GGTTCTTCCEEECTTSCCCCCGGGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSS
T ss_pred CCCEEEccCCcCCCch--hhcCCCCCCEEECCCCCCCCchhhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCC
Confidence 3445555556666665 47777777777777777765321 345777777777764322 667777777777777
Q ss_pred cccCcCCchhhhcCCccceeccccccccCccccccccccccCCCCccCCCC
Q 045127 128 QLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLHSGL 178 (508)
Q Consensus 128 ~l~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~~~n~~ 178 (508)
+++ .+| . +..+++|+.|++++|++++ .++ +..+++|+.+++.+|..
T Consensus 162 ~l~-~~~-~-l~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~L~~N~l 207 (308)
T 1h6u_A 162 QVS-DLT-P-LANLSKLTTLKADDNKISD-ISP-LASLPNLIEVHLKNNQI 207 (308)
T ss_dssp CCC-CCG-G-GTTCTTCCEEECCSSCCCC-CGG-GGGCTTCCEEECTTSCC
T ss_pred cCC-CCh-h-hcCCCCCCEEECCCCccCc-Chh-hcCCCCCCEEEccCCcc
Confidence 777 455 2 6667777777777777776 333 55566666666666654
|
| >3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D | Back alignment and structure |
|---|
Probab=99.41 E-value=3.7e-13 Score=120.15 Aligned_cols=96 Identities=31% Similarity=0.298 Sum_probs=80.5
Q ss_pred CcccCCCccccCCCCCcCeEeCccCcccccCCcc------ccEEEcccCcccCCCChhhhccCCccccccccccccCcCC
Q 045127 61 NCVESFPKIDLRSRPKITPLYLSFNFFWKYCPLG------IMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIP 134 (508)
Q Consensus 61 n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~------l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp 134 (508)
|.++.+|. .+. ++|+.|+|++|+|++..|.. |++|+|++|+|++..|..|.++++|++|+|++|+|+ .+|
T Consensus 19 n~l~~ip~-~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~-~~~ 94 (170)
T 3g39_A 19 KSLASVPT-GIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLK-SIP 94 (170)
T ss_dssp SCCSSCCS-CCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCC
T ss_pred CCcCccCc-cCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCccC-EeC
Confidence 56777886 553 78889999999998876643 489999999999777778899999999999999999 677
Q ss_pred chhhhcCCccceeccccccccCccccc
Q 045127 135 VESFSVLANLTFLNLSYNHFSEMKVSD 161 (508)
Q Consensus 135 ~~~~~~l~~L~~l~l~~N~l~~~~~~~ 161 (508)
+..|..+++|+.|+|++|+++. ..+.
T Consensus 95 ~~~~~~l~~L~~L~L~~N~~~c-~c~~ 120 (170)
T 3g39_A 95 RGAFDNLKSLTHIWLLNNPWDC-ACSD 120 (170)
T ss_dssp TTTTTTCTTCCEEECCSSCBCT-TBGG
T ss_pred HHHhcCCCCCCEEEeCCCCCCC-Cchh
Confidence 5789999999999999999998 5443
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=6.2e-13 Score=131.76 Aligned_cols=156 Identities=14% Similarity=0.193 Sum_probs=116.0
Q ss_pred CCCCCcCCcCCCCCccccccCCCCCCcchhcccccccccccccCCCCCcccCCCccccCCCCCcCeEeCccCcccccCCc
Q 045127 14 DFNSTIMNNCIHNPSLKYCNSSSPMDLNEIFKSTIVASHLCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCPL 93 (508)
Q Consensus 14 ~~~~~~~~~c~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~ 93 (508)
.|....|..|.+......|+......+|..+. ..+..|....|.++.++...|+++++|++|+|++|++++..|.
T Consensus 20 ~~~~~cp~~c~c~l~~l~~~~~~l~~lp~~~~-----~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 94 (330)
T 1xku_A 20 PMGPVCPFRCQCHLRVVQCSDLGLEKVPKDLP-----PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPG 94 (330)
T ss_dssp --CCCCCTTCEEETTEEECTTSCCCSCCCSCC-----TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTT
T ss_pred cccCCCCCCCcCCCeEEEecCCCccccCccCC-----CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHH
Confidence 34556677788777777887666666665442 2445566666788888876799999999999999999877664
Q ss_pred c------ccEEEcccCcccCCCChhhhccCCccccccccccccCcCCchhhhcCCccceeccccccccC--ccccccccc
Q 045127 94 G------IMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSE--MKVSDTKFF 165 (508)
Q Consensus 94 ~------l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp~~~~~~l~~L~~l~l~~N~l~~--~~~~~~~~l 165 (508)
. +++|+|++|+++ .+|..+. ++|++|++++|+++ .+++..|..+++|+.|++++|+++. ..+..+..+
T Consensus 95 ~~~~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l 170 (330)
T 1xku_A 95 AFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRVHENEIT-KVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGM 170 (330)
T ss_dssp TTTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEECCSSCCC-BBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGC
T ss_pred HhcCCCCCCEEECCCCcCC-ccChhhc--ccccEEECCCCccc-ccCHhHhcCCccccEEECCCCcCCccCcChhhccCC
Confidence 4 488999999988 5666554 78888899999888 5555778888888899998888863 345566777
Q ss_pred cccCCCCccCCCC
Q 045127 166 QRFNSSSFLHSGL 178 (508)
Q Consensus 166 ~~l~~~~~~~n~~ 178 (508)
++|+.+.+.+|..
T Consensus 171 ~~L~~L~l~~n~l 183 (330)
T 1xku_A 171 KKLSYIRIADTNI 183 (330)
T ss_dssp TTCCEEECCSSCC
T ss_pred CCcCEEECCCCcc
Confidence 8888888887754
|
| >2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.40 E-value=3.5e-13 Score=120.73 Aligned_cols=119 Identities=19% Similarity=0.170 Sum_probs=92.7
Q ss_pred CCcCCcCCCCCccccccCCCCCCcchhcccccccccccccCCCCCcccCCCccccCCCCCcCeEeCccCcccccCCcccc
Q 045127 17 STIMNNCIHNPSLKYCNSSSPMDLNEIFKSTIVASHLCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCPLGIM 96 (508)
Q Consensus 17 ~~~~~~c~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~l~ 96 (508)
...|..|.+......|++.....+|..+. ..+..|.+..|.+..+++..|+++++|+.|+|++|+|++
T Consensus 4 ~~CP~~C~C~~~~l~~~~n~l~~iP~~~~-----~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~------- 71 (174)
T 2r9u_A 4 AGCPSQCSCDQTLVNCQNIRLASVPAGIP-----TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTA------- 71 (174)
T ss_dssp CSSCTTSEECSSEEECCSSCCSSCCSCCC-----TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC-------
T ss_pred CCCCCCCEECCcEEEeCCCCCCccCCCcC-----CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCc-------
Confidence 45788888887788888777677776443 356667777788999977689999999999999998875
Q ss_pred EEEcccCcccCCCChhhhccCCccccccccccccCcCCchhhhcCCccceeccccccccCcccc
Q 045127 97 SIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVS 160 (508)
Q Consensus 97 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~ 160 (508)
..+..|.++++|++|+|++|+|+ .+|+..|..+++|+.|+|++|++.. .+.
T Consensus 72 -----------i~~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~L~~N~~~c-~~~ 122 (174)
T 2r9u_A 72 -----------IPTGVFDKLTQLTQLDLNDNHLK-SIPRGAFDNLKSLTHIYLYNNPWDC-ECR 122 (174)
T ss_dssp -----------CCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCBCT-TBG
T ss_pred -----------cChhHhCCcchhhEEECCCCccc-eeCHHHhccccCCCEEEeCCCCccc-ccc
Confidence 22345677888888888888888 6665668888888888888888887 444
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.40 E-value=2.9e-13 Score=145.27 Aligned_cols=122 Identities=17% Similarity=0.138 Sum_probs=79.9
Q ss_pred cCCCCCcccCCCccccCCCCCcCeEeCccCcccccCCcc------ccEEEcccCcccCCCChhhhccCCccccccccccc
Q 045127 56 ESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCPLG------IMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQL 129 (508)
Q Consensus 56 L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~------l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l 129 (508)
|....|.++.+|+..|+++++|+.|+|++|.|++..|.. |++|+|++|.+++..|..|+++++|++|+|++|+|
T Consensus 56 l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l 135 (597)
T 3oja_B 56 VTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDL 135 (597)
T ss_dssp EEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCC
Confidence 334445666677655666777777777777776654433 36777777777766666667777777777777777
Q ss_pred cCcCCchhhhcCCccceeccccccccCccccccccccccCCCCccCCCC
Q 045127 130 SGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLHSGL 178 (508)
Q Consensus 130 ~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~~~n~~ 178 (508)
+ .+|+..|+.+++|+.|+|++|.|+++++..+..+++|..+++.+|..
T Consensus 136 ~-~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l 183 (597)
T 3oja_B 136 S-SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRL 183 (597)
T ss_dssp C-CCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCC
T ss_pred C-CCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCC
Confidence 7 55545566777777777777777774444566666677666666654
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} | Back alignment and structure |
|---|
Probab=99.39 E-value=8.2e-13 Score=142.82 Aligned_cols=123 Identities=19% Similarity=0.182 Sum_probs=91.9
Q ss_pred cccccCCCCCcccCCCccccCCCCCcCeEeCccCcccccCCc--------------cccEEEcccCcccCCCChhhh--c
Q 045127 52 HLCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCPL--------------GIMSIDLSNNSLKGAFPIDVL--L 115 (508)
Q Consensus 52 ~l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~--------------~l~~L~Ls~N~l~~~~p~~~~--~ 115 (508)
.+..|....|.++.+|...+..+++|+.|+|++|+++ .+|. .++.|+|++|+++ .+|..+. .
T Consensus 434 ~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~ 511 (636)
T 4eco_A 434 NVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATT 511 (636)
T ss_dssp CEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTT
T ss_pred CCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCC-CcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhcc
Confidence 4555666667777888745666888888888888887 4553 5678888888888 6777776 7
Q ss_pred cCCccccccccccccCcCCchhhhcCCccceecc------ccccccCccccccccccccCCCCccCCCC
Q 045127 116 CTQIQALDLSYNQLSGDIPVESFSVLANLTFLNL------SYNHFSEMKVSDTKFFQRFNSSSFLHSGL 178 (508)
Q Consensus 116 l~~L~~L~l~~N~l~g~lp~~~~~~l~~L~~l~l------~~N~l~~~~~~~~~~l~~l~~~~~~~n~~ 178 (508)
+++|+.|+|++|++++ +| ..+..+++|+.|++ ++|++.+..+..+..+++|+.+++.+|..
T Consensus 512 l~~L~~L~Ls~N~l~~-ip-~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l 578 (636)
T 4eco_A 512 LPYLVGIDLSYNSFSK-FP-TQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDI 578 (636)
T ss_dssp CTTCCEEECCSSCCSS-CC-CGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC
T ss_pred CCCcCEEECCCCCCCC-cC-hhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcC
Confidence 8888888888888884 77 66777888888888 45677775666777778888888887765
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.39 E-value=3.3e-13 Score=135.05 Aligned_cols=137 Identities=18% Similarity=0.103 Sum_probs=111.3
Q ss_pred CCCCcchhcccccccccccccCCCCCcccCCCccccCCCCCcCeEeCccCcccccCCc------cccEEEcccCcccCCC
Q 045127 36 SPMDLNEIFKSTIVASHLCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCPL------GIMSIDLSNNSLKGAF 109 (508)
Q Consensus 36 ~~~~l~~~~~~~~~~~~l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~------~l~~L~Ls~N~l~~~~ 109 (508)
....+|..+. ..+..|+...|.++.+|...|.++++|+.|+|++|++++..|. .+++|+|++|++++..
T Consensus 42 ~l~~iP~~~~-----~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~ 116 (353)
T 2z80_A 42 SLNSIPSGLT-----EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLS 116 (353)
T ss_dssp TCSSCCTTCC-----TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCC
T ss_pred Cccccccccc-----ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCC
Confidence 3335655432 2566677777889999887899999999999999999987664 3599999999999665
Q ss_pred ChhhhccCCccccccccccccCcCCc-hhhhcCCccceeccccc-cccCccccccccccccCCCCccCCCC
Q 045127 110 PIDVLLCTQIQALDLSYNQLSGDIPV-ESFSVLANLTFLNLSYN-HFSEMKVSDTKFFQRFNSSSFLHSGL 178 (508)
Q Consensus 110 p~~~~~l~~L~~L~l~~N~l~g~lp~-~~~~~l~~L~~l~l~~N-~l~~~~~~~~~~l~~l~~~~~~~n~~ 178 (508)
+..|.++++|++|+|++|+++ .+|. ..|..+++|+.|++++| .++++.+..+..+++|+.+++.+|..
T Consensus 117 ~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l 186 (353)
T 2z80_A 117 SSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDL 186 (353)
T ss_dssp HHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTC
T ss_pred HhHhCCCccCCEEECCCCCCc-ccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCc
Confidence 556899999999999999999 8884 47889999999999999 57775566778888999999988864
|
| >3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A* | Back alignment and structure |
|---|
Probab=99.39 E-value=7.7e-13 Score=126.59 Aligned_cols=154 Identities=9% Similarity=0.016 Sum_probs=121.5
Q ss_pred HHHhhcCCCCCceeeecCCeEEEEEEECCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcC-CCCccceeeEEecCCeeE
Q 045127 233 LKAATNGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQ-HKNLIRVLGWNNSRRTRA 311 (508)
Q Consensus 233 l~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~ 311 (508)
+....++|+....++.|+.+.||++... ++.+++|+....... ....+.+|+.+++.+. +..+.++++++...+..|
T Consensus 9 l~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~-~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~ 86 (263)
T 3tm0_A 9 LKKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKG-TTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSN 86 (263)
T ss_dssp HHHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTT-STTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEE
T ss_pred HHHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCC-CHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceE
Confidence 4455678888888999999999999864 689999998642111 2345889999999884 677889999998888899
Q ss_pred EEEeecCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhh---------------------------------------
Q 045127 312 IVTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQE--------------------------------------- 352 (508)
Q Consensus 312 lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~--------------------------------------- 352 (508)
+||||++|.+|.+... +......++.+++++|+.||+
T Consensus 87 lv~e~i~G~~l~~~~~----~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (263)
T 3tm0_A 87 LLMSEADGVLCSEEYE----DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDT 162 (263)
T ss_dssp EEEECCSSEEHHHHCC----TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTC
T ss_pred EEEEecCCeehhhccC----CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccc
Confidence 9999999999987642 122345788999999999998
Q ss_pred --------------------CCCccccCCCCCCEEecCCCceEEeeccCCCCCCCcchhhH
Q 045127 353 --------------------QWPEVDYDLRTGSVLLTDNLEPLISRFKIEYQHRSTKYVYK 393 (508)
Q Consensus 353 --------------------~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~Dv~S 393 (508)
. .++|||++|.||+++++..+.|+||+.+....+..|+-.
T Consensus 163 ~~~~~~~l~~~l~~~~~~~~~-~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~gd~~~Dla~ 222 (263)
T 3tm0_A 163 PFKDPRELYDFLKTEKPEEEL-VFSHGDLGDSNIFVKDGKVSGFIDLGRSGRADKWYDIAF 222 (263)
T ss_dssp SSSSHHHHHHHHHHCCCCCCE-EEECSSCCTTSEEEETTEEEEECCCTTCEEEEHHHHHHH
T ss_pred cCCCHHHHHHHHHhcCCCCCc-eEECCCCCcCcEEEECCcEEEEEEchhcccCCHHHHHHH
Confidence 2 488999999999998766677999998876666656533
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.39 E-value=2.9e-13 Score=151.16 Aligned_cols=115 Identities=20% Similarity=0.163 Sum_probs=57.4
Q ss_pred ccCCCccccCCCCCcCeEeCccCcccccCCccc------cEEEcccCcccCCCChh--hhccCCccccccccccccCcCC
Q 045127 63 VESFPKIDLRSRPKITPLYLSFNFFWKYCPLGI------MSIDLSNNSLKGAFPID--VLLCTQIQALDLSYNQLSGDIP 134 (508)
Q Consensus 63 ~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~l------~~L~Ls~N~l~~~~p~~--~~~l~~L~~L~l~~N~l~g~lp 134 (508)
++.+++.+|+++++|+.|+|++|.|++..|..| ++|+|++|.+++.+|.. |.++++|++|+|++|++++..|
T Consensus 61 ~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~ 140 (844)
T 3j0a_A 61 PLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYL 140 (844)
T ss_dssp CCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCC
T ss_pred ccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCccccccc
Confidence 334433355555555555555555554444322 55555555555444433 5555555555555555553333
Q ss_pred chhhhcCCccceeccccccccCccccccccc--cccCCCCccCCC
Q 045127 135 VESFSVLANLTFLNLSYNHFSEMKVSDTKFF--QRFNSSSFLHSG 177 (508)
Q Consensus 135 ~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l--~~l~~~~~~~n~ 177 (508)
+..|+++++|+.|++++|++++..+..+..+ ++|+.+.+.+|.
T Consensus 141 ~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~n~ 185 (844)
T 3j0a_A 141 HPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANS 185 (844)
T ss_dssp CGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEECCSB
T ss_pred chhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECCCCc
Confidence 2345555555555555555555434444444 455555555554
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.39 E-value=1e-13 Score=138.74 Aligned_cols=126 Identities=16% Similarity=0.137 Sum_probs=100.9
Q ss_pred cccccCCCCCcccCCCccccCCCCCcCeEeCccCcccccCC------ccccEEEcccCcccCCCC-hhhhccCCcccccc
Q 045127 52 HLCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCP------LGIMSIDLSNNSLKGAFP-IDVLLCTQIQALDL 124 (508)
Q Consensus 52 ~l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p------~~l~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~l 124 (508)
.|..|+...|.++.+++..|+++++|++|+|++|++++..+ ..+++|+|++|++++..+ ..|..+++|++|++
T Consensus 77 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l 156 (353)
T 2z80_A 77 NLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRV 156 (353)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEE
T ss_pred CCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEEC
Confidence 45566666778888876579999999999999999986433 245899999999985433 47889999999999
Q ss_pred cccc-ccCcCCchhhhcCCccceeccccccccCccccccccccccCCCCccCCCC
Q 045127 125 SYNQ-LSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLHSGL 178 (508)
Q Consensus 125 ~~N~-l~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~~~n~~ 178 (508)
++|+ ++ .+++..|..+++|+.|++++|++++..+..+..+++|+.+++.+|..
T Consensus 157 ~~n~~~~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l 210 (353)
T 2z80_A 157 GNMDTFT-KIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQH 210 (353)
T ss_dssp EESSSCC-EECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCS
T ss_pred CCCcccc-ccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCcc
Confidence 9995 65 66557889999999999999999986677788888888888888864
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.38 E-value=5.3e-13 Score=142.14 Aligned_cols=145 Identities=12% Similarity=0.015 Sum_probs=90.3
Q ss_pred ccccccCCCCCCcchhcccccccccccccCCCCCcccCCCccccCCCCCcCeEeCccCcccccCCcc------ccEEEcc
Q 045127 28 SLKYCNSSSPMDLNEIFKSTIVASHLCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCPLG------IMSIDLS 101 (508)
Q Consensus 28 ~~~~~~~~~~~~l~~~~~~~~~~~~l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~------l~~L~Ls 101 (508)
..+.|.......+|..+.. .+..|+...|.++.+++.+|.++++|+.|+|++|++++..|.. +++|+|+
T Consensus 10 ~~~~c~~~~l~~ip~~l~~-----~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~ 84 (570)
T 2z63_A 10 ITYQCMELNFYKIPDNLPF-----STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILT 84 (570)
T ss_dssp TEEECCSSCCSSCCSSSCS-----SCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred cEEEeCCCCccccCCCccc-----cccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCc
Confidence 3456766655566653321 3444555556666666556777777777777777776654432 3677777
Q ss_pred cCcccCCCChhhhccCCccccccccccccCcCCchhhhcCCccceeccccccccCc-cccccccccccCCCCccCCCC
Q 045127 102 NNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEM-KVSDTKFFQRFNSSSFLHSGL 178 (508)
Q Consensus 102 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp~~~~~~l~~L~~l~l~~N~l~~~-~~~~~~~l~~l~~~~~~~n~~ 178 (508)
+|++++..|..|+++++|++|++++|+++ .+|...|+.+++|++|++++|+++++ .+..+..+++|+.+++.+|..
T Consensus 85 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l 161 (570)
T 2z63_A 85 GNPIQSLALGAFSGLSSLQKLVAVETNLA-SLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKI 161 (570)
T ss_dssp TCCCCEECTTTTTTCTTCCEEECTTSCCC-CSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCC
T ss_pred CCcCCccCHhhhcCccccccccccccccc-cCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCcc
Confidence 77777666666777777777777777776 55534566677777777777776653 244555666666666666643
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.38 E-value=1.4e-13 Score=135.70 Aligned_cols=121 Identities=19% Similarity=0.202 Sum_probs=84.6
Q ss_pred ccccCCCCCcccCCCccccCCCCCcCeEeCccCcccccCC-------ccccEEEcccCcccCCCChhhhccCCccccccc
Q 045127 53 LCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCP-------LGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLS 125 (508)
Q Consensus 53 l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p-------~~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 125 (508)
+..|....|.++.+++..|+.+++|+.|+|++|.+++..| ..+++|+|++|++++. | ....+++|++|+|+
T Consensus 122 L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~-~~~~l~~L~~L~Ls 199 (317)
T 3o53_A 122 KKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLS 199 (317)
T ss_dssp CEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEECC
T ss_pred CCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-c-cccccccCCEEECC
Confidence 4445555566777766567777777777777777775433 2447777887777754 3 23347778888888
Q ss_pred cccccCcCCchhhhcCCccceeccccccccCccccccccccccCCCCccCCCC
Q 045127 126 YNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLHSGL 178 (508)
Q Consensus 126 ~N~l~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~~~n~~ 178 (508)
+|+++ .+| ..+..+++|+.|++++|+|++ .++.+..+++|..+++.+|++
T Consensus 200 ~N~l~-~l~-~~~~~l~~L~~L~L~~N~l~~-l~~~~~~l~~L~~L~l~~N~~ 249 (317)
T 3o53_A 200 SNKLA-FMG-PEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGF 249 (317)
T ss_dssp SSCCC-EEC-GGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCC
T ss_pred CCcCC-cch-hhhcccCcccEEECcCCcccc-hhhHhhcCCCCCEEEccCCCc
Confidence 88887 566 347778888888888888887 566667777788888888765
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* | Back alignment and structure |
|---|
Probab=99.38 E-value=3.7e-13 Score=142.82 Aligned_cols=120 Identities=20% Similarity=0.210 Sum_probs=102.9
Q ss_pred cccccCCCCCcccCCCccccCCCCCcCeEeCccCcccc---cCCccccEEEcccCcccCCCChhhhccCCcccccccccc
Q 045127 52 HLCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWK---YCPLGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQ 128 (508)
Q Consensus 52 ~l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~---~~p~~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~ 128 (508)
.|..|+...|.++.+|. .++.+++|+.|+|++|+|++ .+|..+++|+|++|++++.+ ..+++|++|+|++|+
T Consensus 388 ~L~~L~Ls~N~l~~lp~-~~~~~~~L~~L~Ls~N~l~~l~~~~~~~L~~L~Ls~N~l~~~~----~~l~~L~~L~Ls~N~ 462 (549)
T 2z81_A 388 NLTSLDISRNTFHPMPD-SCQWPEKMRFLNLSSTGIRVVKTCIPQTLEVLDVSNNNLDSFS----LFLPRLQELYISRNK 462 (549)
T ss_dssp TCCEEECTTCCCCCCCS-CCCCCTTCCEEECTTSCCSCCCTTSCTTCSEEECCSSCCSCCC----CCCTTCCEEECCSSC
T ss_pred CCCEEECCCCCCccCCh-hhcccccccEEECCCCCcccccchhcCCceEEECCCCChhhhc----ccCChhcEEECCCCc
Confidence 45566677788889998 89999999999999999874 34567899999999999653 578999999999999
Q ss_pred ccCcCCchhhhcCCccceeccccccccCccccccccccccCCCCccCCCCC
Q 045127 129 LSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLHSGLF 179 (508)
Q Consensus 129 l~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~~~n~~~ 179 (508)
|+ .+| . ...+++|+.|++++|+|+++++..+..+++++.+++.+|++.
T Consensus 463 l~-~ip-~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 510 (549)
T 2z81_A 463 LK-TLP-D-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWD 510 (549)
T ss_dssp CS-SCC-C-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBC
T ss_pred cC-cCC-C-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCcc
Confidence 99 999 4 467999999999999999965566888999999999999974
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.37 E-value=3.5e-13 Score=143.55 Aligned_cols=127 Identities=16% Similarity=0.107 Sum_probs=99.2
Q ss_pred cccccCCCCCcccCCCc-cccCCCCCcCeEeCccCcccccCCc------cccEEEcccCccc-CCCChhhhccCCccccc
Q 045127 52 HLCNESKNPNCVESFPK-IDLRSRPKITPLYLSFNFFWKYCPL------GIMSIDLSNNSLK-GAFPIDVLLCTQIQALD 123 (508)
Q Consensus 52 ~l~~L~~~~n~~~~~p~-~~~~~l~~L~~L~L~~N~l~~~~p~------~l~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~ 123 (508)
.+..|....|.+..+++ ..|.++++|+.|+|++|.+++..|. .+++|+|++|+++ +.+|..|..+++|++|+
T Consensus 397 ~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~ 476 (570)
T 2z63_A 397 QLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLD 476 (570)
T ss_dssp TCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEE
T ss_pred CCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEE
Confidence 34455555666666543 3678888888888888888876663 3488899998887 57888888889999999
Q ss_pred cccccccCcCCchhhhcCCccceeccccccccCccccccccccccCCCCccCCCCC
Q 045127 124 LSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLHSGLF 179 (508)
Q Consensus 124 l~~N~l~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~~~n~~~ 179 (508)
|++|++++..| ..|..+++|+.|++++|+++++++..+..+++|+.+++.+|++.
T Consensus 477 l~~n~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~ 531 (570)
T 2z63_A 477 LSQCQLEQLSP-TAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWD 531 (570)
T ss_dssp CTTSCCCEECT-TTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred CCCCccccCCh-hhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCccc
Confidence 99999986556 78888899999999999999855556778888888889888874
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 | Back alignment and structure |
|---|
Probab=99.37 E-value=1.7e-12 Score=127.49 Aligned_cols=117 Identities=15% Similarity=0.217 Sum_probs=61.4
Q ss_pred ccccCCCCCcccCCCccccCCCCCcCeEeCccCcccccCC----ccccEEEcccCcccCCCChhhhccCCcccccccccc
Q 045127 53 LCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCP----LGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQ 128 (508)
Q Consensus 53 l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p----~~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~ 128 (508)
|..|....|.++.++. +..+++|+.|+|++|.+++..| ..++.|+|++|++++. +. +..+++|+.|+|++|+
T Consensus 109 L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~~~-~~-l~~l~~L~~L~l~~n~ 184 (308)
T 1h6u_A 109 IKTLDLTSTQITDVTP--LAGLSNLQVLYLDLNQITNISPLAGLTNLQYLSIGNAQVSDL-TP-LANLSKLTTLKADDNK 184 (308)
T ss_dssp CCEEECTTSCCCCCGG--GTTCTTCCEEECCSSCCCCCGGGGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSC
T ss_pred CCEEECCCCCCCCchh--hcCCCCCCEEECCCCccCcCccccCCCCccEEEccCCcCCCC-hh-hcCCCCCCEEECCCCc
Confidence 3344444455555543 5555666666666665554322 2345566666655532 22 5555566666666666
Q ss_pred ccCcCCchhhhcCCccceeccccccccCccccccccccccCCCCccCCCC
Q 045127 129 LSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLHSGL 178 (508)
Q Consensus 129 l~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~~~n~~ 178 (508)
++ .+| . +..+++|+.|++++|++++ .++ +..+++|..+++.+|++
T Consensus 185 l~-~~~-~-l~~l~~L~~L~L~~N~l~~-~~~-l~~l~~L~~L~l~~N~i 229 (308)
T 1h6u_A 185 IS-DIS-P-LASLPNLIEVHLKNNQISD-VSP-LANTSNLFIVTLTNQTI 229 (308)
T ss_dssp CC-CCG-G-GGGCTTCCEEECTTSCCCB-CGG-GTTCTTCCEEEEEEEEE
T ss_pred cC-cCh-h-hcCCCCCCEEEccCCccCc-ccc-ccCCCCCCEEEccCCee
Confidence 55 444 1 4555556666666666655 222 44455555555555543
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.37 E-value=1.2e-12 Score=132.91 Aligned_cols=62 Identities=21% Similarity=0.231 Sum_probs=28.1
Q ss_pred hhccCCccccccccccccCcCCchhhhcCCccceeccccccccCccccccccccccCCCCccCC
Q 045127 113 VLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLHS 176 (508)
Q Consensus 113 ~~~l~~L~~L~l~~N~l~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~~~n 176 (508)
+..+++|++|+|++|++++..| ..|..+++|+.|++++|++++ .+.....+++|+.+++.+|
T Consensus 244 l~~l~~L~~L~Ls~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n 305 (390)
T 3o6n_A 244 LLNYPGLVEVDLSYNELEKIMY-HPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHN 305 (390)
T ss_dssp GGGCTTCSEEECCSSCCCEEES-GGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSS
T ss_pred HcCCCCccEEECCCCcCCCcCh-hHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCC
Confidence 3444444444444444443333 444444444444444444444 3333334444444444444
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.37 E-value=1.2e-12 Score=138.60 Aligned_cols=112 Identities=18% Similarity=0.197 Sum_probs=79.9
Q ss_pred cccccCCCCCcccCCCccccCCCCCcCeEeCccCcccccCC---ccccEEEcccCcccCCCChhhhccCCcccccccccc
Q 045127 52 HLCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCP---LGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQ 128 (508)
Q Consensus 52 ~l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p---~~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~ 128 (508)
.|..|....|.++.+|. .+++|+.|+|++|+|++ +| ..++.|+|++|+|++ +|. |. ++|+.|+|++|+
T Consensus 121 ~L~~L~Ls~N~l~~lp~----~l~~L~~L~Ls~N~l~~-lp~~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~ 191 (571)
T 3cvr_A 121 SLKHLDVDNNQLTMLPE----LPALLEYINADNNQLTM-LPELPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNL 191 (571)
T ss_dssp TCCEEECCSSCCSCCCC----CCTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSC
T ss_pred CCCEEECCCCcCCCCCC----cCccccEEeCCCCccCc-CCCcCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCC
Confidence 45555566667777775 46778888888888776 44 355788888888875 666 55 788888888888
Q ss_pred ccCcCCchhhhcCCcc-------ceeccccccccCccccccccccccCCCCccCCCC
Q 045127 129 LSGDIPVESFSVLANL-------TFLNLSYNHFSEMKVSDTKFFQRFNSSSFLHSGL 178 (508)
Q Consensus 129 l~g~lp~~~~~~l~~L-------~~l~l~~N~l~~~~~~~~~~l~~l~~~~~~~n~~ 178 (508)
|+ .+| . |.. +| +.|+|++|+|+. .++.+..+++|..+++.+|+.
T Consensus 192 L~-~lp-~-~~~--~L~~~~~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~L~~N~l 242 (571)
T 3cvr_A 192 LE-SLP-A-VPV--RNHHSEETEIFFRCRENRITH-IPENILSLDPTCTIILEDNPL 242 (571)
T ss_dssp CS-SCC-C-CC----------CCEEEECCSSCCCC-CCGGGGGSCTTEEEECCSSSC
T ss_pred CC-chh-h-HHH--hhhcccccceEEecCCCccee-cCHHHhcCCCCCEEEeeCCcC
Confidence 88 787 4 443 66 888888888887 566666688888888888865
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.37 E-value=4e-13 Score=136.34 Aligned_cols=125 Identities=17% Similarity=0.111 Sum_probs=99.4
Q ss_pred ccccCCCCCcccCCCccccCCCCCcCeEeCccCcccccCCc------cccEEEcccCcccCCCChhhhccCCcccccccc
Q 045127 53 LCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCPL------GIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSY 126 (508)
Q Consensus 53 l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~------~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~ 126 (508)
+..|....|.++.+|...|..+++|+.|+|++|.+++..|. .+++|+|++|++++..|..|+++++|++|+|++
T Consensus 47 l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 126 (390)
T 3o6n_A 47 QKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLER 126 (390)
T ss_dssp CSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred ceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCC
Confidence 34455555778888875678888899999999888875553 348889999988887788888888899999999
Q ss_pred ccccCcCCchhhhcCCccceeccccccccCccccccccccccCCCCccCCCC
Q 045127 127 NQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLHSGL 178 (508)
Q Consensus 127 N~l~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~~~n~~ 178 (508)
|+++ .+|+..|..+++|+.|++++|+++++.+..+..+++|+.+++.+|..
T Consensus 127 n~l~-~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 177 (390)
T 3o6n_A 127 NDLS-SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRL 177 (390)
T ss_dssp SCCC-CCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCC
T ss_pred CccC-cCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcC
Confidence 9888 77756678888899999999988885555677788888888888865
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.36 E-value=3.5e-13 Score=149.41 Aligned_cols=115 Identities=17% Similarity=0.286 Sum_probs=94.8
Q ss_pred CcccCCCccccCCCCCcCeEeCccCcccc-----------------cCCcc--------ccEEEcccCcccCCCChhhhc
Q 045127 61 NCVESFPKIDLRSRPKITPLYLSFNFFWK-----------------YCPLG--------IMSIDLSNNSLKGAFPIDVLL 115 (508)
Q Consensus 61 n~~~~~p~~~~~~l~~L~~L~L~~N~l~~-----------------~~p~~--------l~~L~Ls~N~l~~~~p~~~~~ 115 (508)
|.+..||. .|++|++|+.|+|++|+|++ .+|.. |++|+|++|++.+.+|..|++
T Consensus 435 N~L~~IP~-~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~ 513 (876)
T 4ecn_A 435 NRITFISK-AIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYD 513 (876)
T ss_dssp CEEEEECG-GGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGG
T ss_pred CcccchhH-HHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhC
Confidence 34445887 89999999999999999988 36643 389999999999999999999
Q ss_pred cCCcccccccccc-ccC-cCCchhhhcCC-------ccceeccccccccCcccc--ccccccccCCCCccCCCC
Q 045127 116 CTQIQALDLSYNQ-LSG-DIPVESFSVLA-------NLTFLNLSYNHFSEMKVS--DTKFFQRFNSSSFLHSGL 178 (508)
Q Consensus 116 l~~L~~L~l~~N~-l~g-~lp~~~~~~l~-------~L~~l~l~~N~l~~~~~~--~~~~l~~l~~~~~~~n~~ 178 (508)
+++|+.|+|++|+ ++| .+| ..++.++ +|+.|++++|+|+. .+. .+..+++|..+++.+|..
T Consensus 514 L~~L~~L~Ls~N~~lsg~~iP-~~i~~L~~~~~~l~~L~~L~Ls~N~L~~-ip~~~~l~~L~~L~~L~Ls~N~l 585 (876)
T 4ecn_A 514 LPELQSLNIACNRGISAAQLK-ADWTRLADDEDTGPKIQIFYMGYNNLEE-FPASASLQKMVKLGLLDCVHNKV 585 (876)
T ss_dssp CSSCCEEECTTCTTSCHHHHH-HHHHHHHHCTTTTTTCCEEECCSSCCCB-CCCHHHHTTCTTCCEEECTTSCC
T ss_pred CCCCCEEECcCCCCcccccch-HHHHhhhhcccccCCccEEEeeCCcCCc-cCChhhhhcCCCCCEEECCCCCc
Confidence 9999999999998 887 788 6666665 89999999999986 565 677888888888888865
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.36 E-value=3.1e-13 Score=141.28 Aligned_cols=164 Identities=21% Similarity=0.169 Sum_probs=73.6
Q ss_pred cccccCCCCCCCCCCcCCcCCC-CCccccccCCCCCCcchhcccccccccccccCCCCCcccCCCccccCCCCCcCeEeC
Q 045127 4 EDLNNLHPPPDFNSTIMNNCIH-NPSLKYCNSSSPMDLNEIFKSTIVASHLCNESKNPNCVESFPKIDLRSRPKITPLYL 82 (508)
Q Consensus 4 ~~l~~l~~~~~~~~~~~~~c~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L 82 (508)
..|..|+++.+....+++..+. .+.+..++.. ...+.+..... ....|..|+...|.++.+|. .++|+.|+|
T Consensus 34 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls-~N~l~~~~~l~-~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L~L 106 (487)
T 3oja_A 34 WNVKELDLSGNPLSQISAADLAPFTKLELLNLS-SNVLYETLDLE-SLSTLRTLDLNNNYVQELLV-----GPSIETLHA 106 (487)
T ss_dssp GGCCEEECCSSCCCCCCGGGGTTCTTCCEEECT-TSCCEEEEECT-TCTTCCEEECCSSEEEEEEE-----CTTCCEEEC
T ss_pred CCccEEEeeCCcCCCCCHHHHhCCCCCCEEEee-CCCCCCCcccc-cCCCCCEEEecCCcCCCCCC-----CCCcCEEEC
Confidence 3567777777776666543222 2223333211 11111111110 01133444444455555443 144555555
Q ss_pred ccCcccccCC---ccccEEEcccCcccCCCChhhhccCCccccccccccccCcCCchhhh-cCCccceeccccccccCcc
Q 045127 83 SFNFFWKYCP---LGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFS-VLANLTFLNLSYNHFSEMK 158 (508)
Q Consensus 83 ~~N~l~~~~p---~~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp~~~~~-~l~~L~~l~l~~N~l~~~~ 158 (508)
++|.|++..+ +.++.|+|++|.+++..|..|+.+++|++|+|++|++++..| ..+. .+++|+.|+|++|.|++ .
T Consensus 107 ~~N~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~l~~~l~~L~~L~Ls~N~l~~-~ 184 (487)
T 3oja_A 107 ANNNISRVSCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNF-AELAASSDTLEHLNLQYNFIYD-V 184 (487)
T ss_dssp CSSCCCCEEECCCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEG-GGGGGGTTTCCEEECTTSCCCE-E
T ss_pred cCCcCCCCCccccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcCh-HHHhhhCCcccEEecCCCcccc-c
Confidence 5555444322 123555555555555555555555555555555555554444 3332 45555555555555554 2
Q ss_pred ccccccccccCCCCccCCC
Q 045127 159 VSDTKFFQRFNSSSFLHSG 177 (508)
Q Consensus 159 ~~~~~~l~~l~~~~~~~n~ 177 (508)
+ ....+++|..+++++|.
T Consensus 185 ~-~~~~l~~L~~L~Ls~N~ 202 (487)
T 3oja_A 185 K-GQVVFAKLKTLDLSSNK 202 (487)
T ss_dssp E-CCCCCTTCCEEECCSSC
T ss_pred c-ccccCCCCCEEECCCCC
Confidence 1 12234444444444443
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 | Back alignment and structure |
|---|
Probab=99.36 E-value=6.2e-13 Score=119.28 Aligned_cols=121 Identities=14% Similarity=0.054 Sum_probs=94.5
Q ss_pred cccccCCCCCcccCCCccccCCCC-CcCeEeCccCcccccCC-----ccccEEEcccCcccCCCChhhhccCCccccccc
Q 045127 52 HLCNESKNPNCVESFPKIDLRSRP-KITPLYLSFNFFWKYCP-----LGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLS 125 (508)
Q Consensus 52 ~l~~L~~~~n~~~~~p~~~~~~l~-~L~~L~L~~N~l~~~~p-----~~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 125 (508)
.+..|....|.++.+|. +..+. +|+.|+|++|.|++. + ..+++|+|++|+|++..|..|..+++|++|+|+
T Consensus 20 ~L~~L~l~~n~l~~i~~--~~~~~~~L~~L~Ls~N~l~~~-~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 96 (176)
T 1a9n_A 20 RDRELDLRGYKIPVIEN--LGATLDQFDAIDFSDNEIRKL-DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILT 96 (176)
T ss_dssp SCEEEECTTSCCCSCCC--GGGGTTCCSEEECCSSCCCEE-CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECC
T ss_pred CceEEEeeCCCCchhHH--hhhcCCCCCEEECCCCCCCcc-cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEECC
Confidence 45556666677888864 55555 999999999998864 2 345899999999996655666899999999999
Q ss_pred cccccCcCCc-hhhhcCCccceeccccccccCccccc----cccccccCCCCccCCC
Q 045127 126 YNQLSGDIPV-ESFSVLANLTFLNLSYNHFSEMKVSD----TKFFQRFNSSSFLHSG 177 (508)
Q Consensus 126 ~N~l~g~lp~-~~~~~l~~L~~l~l~~N~l~~~~~~~----~~~l~~l~~~~~~~n~ 177 (508)
+|+++ .+|. ..+..+++|+.|++++|+++. .++. +..++++..+++.+|.
T Consensus 97 ~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~-~~~~~~~~~~~l~~L~~Ld~~~n~ 151 (176)
T 1a9n_A 97 NNSLV-ELGDLDPLASLKSLTYLCILRNPVTN-KKHYRLYVIYKVPQVRVLDFQKVK 151 (176)
T ss_dssp SCCCC-CGGGGGGGGGCTTCCEEECCSSGGGG-STTHHHHHHHHCTTCSEETTEECC
T ss_pred CCcCC-cchhhHhhhcCCCCCEEEecCCCCCC-cHhHHHHHHHHCCccceeCCCcCC
Confidence 99997 7882 278889999999999999987 4443 6778888888888775
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.35 E-value=2.9e-13 Score=133.15 Aligned_cols=124 Identities=21% Similarity=0.114 Sum_probs=76.4
Q ss_pred cccccCCCCCcccCCCccccCCCCCcCeEeCccCcccccC----------CccccEEEcccCcccC--CCC-hhhhccCC
Q 045127 52 HLCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYC----------PLGIMSIDLSNNSLKG--AFP-IDVLLCTQ 118 (508)
Q Consensus 52 ~l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~----------p~~l~~L~Ls~N~l~~--~~p-~~~~~l~~ 118 (508)
.|..|....|.++.++...|+.+++|+.|+|++|++.+.+ ...+++|+|++|++++ .++ ..+..+++
T Consensus 150 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~ 229 (312)
T 1wwl_A 150 GLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQ 229 (312)
T ss_dssp TCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCC
T ss_pred CCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCC
Confidence 4555566667777777557888888888888888765421 1344777777777762 112 22345667
Q ss_pred ccccccccccccCcCCchhhhcCCccceeccccccccCccccccccccccCCCCccCCCC
Q 045127 119 IQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLHSGL 178 (508)
Q Consensus 119 L~~L~l~~N~l~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~~~n~~ 178 (508)
|++|+|++|++++..|...+..+++|+.|++++|+|+. .+..+. ++|+.+++.+|..
T Consensus 230 L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~--~~L~~L~Ls~N~l 286 (312)
T 1wwl_A 230 LQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLKQ-VPKGLP--AKLSVLDLSYNRL 286 (312)
T ss_dssp CSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCSS-CCSSCC--SEEEEEECCSSCC
T ss_pred CCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccCh-hhhhcc--CCceEEECCCCCC
Confidence 77777777777755543445556677777777777765 333332 5666666666643
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A | Back alignment and structure |
|---|
Probab=99.35 E-value=1.5e-12 Score=126.71 Aligned_cols=117 Identities=24% Similarity=0.227 Sum_probs=81.2
Q ss_pred cccccCCCCCcccCCCccccCCCCCcCeEeCccCcccccCC-----ccccEEEcccCcccCCCChhhhccCCcccccccc
Q 045127 52 HLCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCP-----LGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSY 126 (508)
Q Consensus 52 ~l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p-----~~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~ 126 (508)
.|..|....|.++.+|. +..+++|+.|+|++|++++. + ..++.|+|++|++++. ..+..+++|+.|+|++
T Consensus 91 ~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~n~i~~~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~ 165 (291)
T 1h6t_A 91 NLGWLFLDENKVKDLSS--LKDLKKLKSLSLEHNGISDI-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLED 165 (291)
T ss_dssp TCCEEECCSSCCCCGGG--GTTCTTCCEEECTTSCCCCC-GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCS
T ss_pred CCCEEECCCCcCCCChh--hccCCCCCEEECCCCcCCCC-hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccC
Confidence 34555556666777653 77777777777777777653 2 3457778888877754 5677777788888888
Q ss_pred ccccCcCCchhhhcCCccceeccccccccCccccccccccccCCCCccCCCC
Q 045127 127 NQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLHSGL 178 (508)
Q Consensus 127 N~l~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~~~n~~ 178 (508)
|+++ .++ . +..+++|+.|++++|++++ . +.+..+++|..+++.+|+.
T Consensus 166 N~l~-~~~-~-l~~l~~L~~L~L~~N~i~~-l-~~l~~l~~L~~L~l~~n~i 212 (291)
T 1h6t_A 166 NQIS-DIV-P-LAGLTKLQNLYLSKNHISD-L-RALAGLKNLDVLELFSQEC 212 (291)
T ss_dssp SCCC-CCG-G-GTTCTTCCEEECCSSCCCB-C-GGGTTCTTCSEEEEEEEEE
T ss_pred Cccc-cch-h-hcCCCccCEEECCCCcCCC-C-hhhccCCCCCEEECcCCcc
Confidence 8777 455 2 6777778888888887776 3 3366677777777777754
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* | Back alignment and structure |
|---|
Probab=99.35 E-value=6.7e-13 Score=140.81 Aligned_cols=126 Identities=20% Similarity=0.138 Sum_probs=94.8
Q ss_pred cccccCCCCCcccCCCccccCCCCCcCeEeCccCcccccCCcc------ccEEEcccCcccCCCChhhhccCCccccccc
Q 045127 52 HLCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCPLG------IMSIDLSNNSLKGAFPIDVLLCTQIQALDLS 125 (508)
Q Consensus 52 ~l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~------l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 125 (508)
.+..|+...|.++.+++.+|+++++|++|+|++|++++..|.. +++|+|++|++++..|..|+++++|++|+|+
T Consensus 27 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls 106 (549)
T 2z81_A 27 AMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLM 106 (549)
T ss_dssp TCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECT
T ss_pred CccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECC
Confidence 4555666667777776557888888888888888888766643 3888888888887777778888888888888
Q ss_pred cccccC-cCCchhhhcCCccceecccccc-ccCccccccccccccCCCCccCCCC
Q 045127 126 YNQLSG-DIPVESFSVLANLTFLNLSYNH-FSEMKVSDTKFFQRFNSSSFLHSGL 178 (508)
Q Consensus 126 ~N~l~g-~lp~~~~~~l~~L~~l~l~~N~-l~~~~~~~~~~l~~l~~~~~~~n~~ 178 (508)
+|++++ .+| ..++++++|+.|++++|+ +..+++..+..+++|+.+++.+|..
T Consensus 107 ~n~l~~~~~~-~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l 160 (549)
T 2z81_A 107 GNPYQTLGVT-SLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSL 160 (549)
T ss_dssp TCCCSSSCSS-CSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTC
T ss_pred CCcccccchh-hhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcc
Confidence 888884 345 577888888888888888 4442234667778888888777764
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.35 E-value=1.9e-12 Score=143.54 Aligned_cols=123 Identities=18% Similarity=0.186 Sum_probs=82.4
Q ss_pred cccccCCCCCcccCCCccccCCCCCcCeEeCccCcccccCCc--------------cccEEEcccCcccCCCChhhh--c
Q 045127 52 HLCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCPL--------------GIMSIDLSNNSLKGAFPIDVL--L 115 (508)
Q Consensus 52 ~l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~--------------~l~~L~Ls~N~l~~~~p~~~~--~ 115 (508)
.|..|....|.+..+|...+..+++|+.|+|++|+|+ .+|. .++.|+|++|+|+ .+|..+. .
T Consensus 674 ~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~ 751 (876)
T 4ecn_A 674 NASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATT 751 (876)
T ss_dssp CEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTT
T ss_pred CcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCC-ccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhcc
Confidence 3445555566677777644456777777777777776 3442 5667777777777 5666665 7
Q ss_pred cCCccccccccccccCcCCchhhhcCCccceecccc------ccccCccccccccccccCCCCccCCCC
Q 045127 116 CTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSY------NHFSEMKVSDTKFFQRFNSSSFLHSGL 178 (508)
Q Consensus 116 l~~L~~L~l~~N~l~g~lp~~~~~~l~~L~~l~l~~------N~l~~~~~~~~~~l~~l~~~~~~~n~~ 178 (508)
+++|+.|+|++|+|++ +| ..+..+++|+.|+|++ |++.+..+..+..+++|+.+++.+|..
T Consensus 752 l~~L~~L~Ls~N~L~~-lp-~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L 818 (876)
T 4ecn_A 752 LPYLSNMDVSYNCFSS-FP-TQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI 818 (876)
T ss_dssp CTTCCEEECCSSCCSS-CC-CGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC
T ss_pred CCCcCEEEeCCCCCCc-cc-hhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC
Confidence 7777777777777774 66 5666777777777755 666665555666677777777777654
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.34 E-value=1.1e-12 Score=146.43 Aligned_cols=171 Identities=14% Similarity=0.128 Sum_probs=118.5
Q ss_pred cccccccCCCCCCCCCCcCCcCCCCCccccccCCCCCCcchhccc-c-----ccc-ccccccCCCCCcccCCCccccCCC
Q 045127 2 VVEDLNNLHPPPDFNSTIMNNCIHNPSLKYCNSSSPMDLNEIFKS-T-----IVA-SHLCNESKNPNCVESFPKIDLRSR 74 (508)
Q Consensus 2 ~~~~l~~l~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~l~~~~~~-~-----~~~-~~l~~L~~~~n~~~~~p~~~~~~l 74 (508)
++..+..|+++.|....++...+ ..|..+..+++..+... . ... ..|..|....|.+..+++..|+++
T Consensus 22 lp~~l~~LdLs~N~i~~i~~~~~-----~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l 96 (844)
T 3j0a_A 22 VLNTTERLLLSFNYIRTVTASSF-----PFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGL 96 (844)
T ss_dssp SCTTCCEEEEESCCCCEECSSSC-----SSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSC
T ss_pred CCCCcCEEECCCCcCCccChhHC-----cccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCC
Confidence 35667777777777766644332 23444444444433111 0 111 145556666677877755589999
Q ss_pred CCcCeEeCccCcccccCCc--------cccEEEcccCcccCCCC-hhhhccCCccccccccccccCcCCchhhhcC--Cc
Q 045127 75 PKITPLYLSFNFFWKYCPL--------GIMSIDLSNNSLKGAFP-IDVLLCTQIQALDLSYNQLSGDIPVESFSVL--AN 143 (508)
Q Consensus 75 ~~L~~L~L~~N~l~~~~p~--------~l~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~g~lp~~~~~~l--~~ 143 (508)
++|++|+|++|.+++.+|. .|++|+|++|.+++..| ..|+++++|++|+|++|++++..| ..+..+ ++
T Consensus 97 ~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~-~~l~~l~~~~ 175 (844)
T 3j0a_A 97 FHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCE-HELEPLQGKT 175 (844)
T ss_dssp SSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCS-GGGHHHHHCS
T ss_pred cccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCH-HHcccccCCc
Confidence 9999999999999875553 34899999999987655 578999999999999999987777 778877 88
Q ss_pred cceeccccccccCccccccccccc------cCCCCccCCCC
Q 045127 144 LTFLNLSYNHFSEMKVSDTKFFQR------FNSSSFLHSGL 178 (508)
Q Consensus 144 L~~l~l~~N~l~~~~~~~~~~l~~------l~~~~~~~n~~ 178 (508)
|+.|++++|.+++..+..+..+.+ +..+++.+|..
T Consensus 176 L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l 216 (844)
T 3j0a_A 176 LSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGW 216 (844)
T ss_dssp SCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCS
T ss_pred cceEECCCCccccccccchhhcCCccccCceeEEecCCCcC
Confidence 999999999998854544444433 77788888754
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A | Back alignment and structure |
|---|
Probab=99.34 E-value=3.2e-12 Score=136.75 Aligned_cols=159 Identities=19% Similarity=0.199 Sum_probs=115.0
Q ss_pred cccccCCCCCCCCCCcCCcCCCCCccccccCCCCCCcchhccccc----ccccccccCCCCCcccCCCccccCCCCCcCe
Q 045127 4 EDLNNLHPPPDFNSTIMNNCIHNPSLKYCNSSSPMDLNEIFKSTI----VASHLCNESKNPNCVESFPKIDLRSRPKITP 79 (508)
Q Consensus 4 ~~l~~l~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~l~~~~~~~~----~~~~l~~L~~~~n~~~~~p~~~~~~l~~L~~ 79 (508)
+.|..|++..+....++. +..|.++..+++..+..... ....|..|.+..|.+..+| .+..+++|+.
T Consensus 43 ~~L~~L~l~~n~i~~l~~-------l~~l~~L~~L~Ls~N~l~~~~~l~~l~~L~~L~Ls~N~l~~l~--~l~~l~~L~~ 113 (605)
T 1m9s_A 43 NSIDQIIANNSDIKSVQG-------IQYLPNVTKLFLNGNKLTDIKPLTNLKNLGWLFLDENKIKDLS--SLKDLKKLKS 113 (605)
T ss_dssp TTCCCCBCTTCCCCCCTT-------GGGCTTCCEEECTTSCCCCCGGGGGCTTCCEEECCSSCCCCCT--TSTTCTTCCE
T ss_pred CCCCEEECcCCCCCCChH-------HccCCCCCEEEeeCCCCCCChhhccCCCCCEEECcCCCCCCCh--hhccCCCCCE
Confidence 456666666666666542 33344443333333221111 1124566667778888887 5899999999
Q ss_pred EeCccCcccccCC-----ccccEEEcccCcccCCCChhhhccCCccccccccccccCcCCchhhhcCCccceeccccccc
Q 045127 80 LYLSFNFFWKYCP-----LGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHF 154 (508)
Q Consensus 80 L~L~~N~l~~~~p-----~~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp~~~~~~l~~L~~l~l~~N~l 154 (508)
|+|++|.|++. | ..|+.|+|++|+|++. ..|..|++|+.|+|++|+|+ .++ . +..+++|+.|+|++|+|
T Consensus 114 L~Ls~N~l~~l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~-~~~-~-l~~l~~L~~L~Ls~N~i 187 (605)
T 1m9s_A 114 LSLEHNGISDI-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQIS-DIV-P-LAGLTKLQNLYLSKNHI 187 (605)
T ss_dssp EECTTSCCCCC-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCC-CCG-G-GTTCTTCCEEECCSSCC
T ss_pred EEecCCCCCCC-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCC-Cch-h-hccCCCCCEEECcCCCC
Confidence 99999999863 3 4569999999999965 67899999999999999999 454 2 88899999999999999
Q ss_pred cCccccccccccccCCCCccCCCCC
Q 045127 155 SEMKVSDTKFFQRFNSSSFLHSGLF 179 (508)
Q Consensus 155 ~~~~~~~~~~l~~l~~~~~~~n~~~ 179 (508)
++ . +.+..+++|..+.+.+|+..
T Consensus 188 ~~-l-~~l~~l~~L~~L~L~~N~l~ 210 (605)
T 1m9s_A 188 SD-L-RALAGLKNLDVLELFSQECL 210 (605)
T ss_dssp CB-C-GGGTTCTTCSEEECCSEEEE
T ss_pred CC-C-hHHccCCCCCEEEccCCcCc
Confidence 98 3 56778889999999888654
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.34 E-value=7.1e-13 Score=121.19 Aligned_cols=122 Identities=16% Similarity=0.180 Sum_probs=103.5
Q ss_pred cccccCCCCCcccCCCccccCCCCCcCeEeCccCcccccCC----ccccEEEcccCcccCCCChhhhccCCccccccccc
Q 045127 52 HLCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCP----LGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYN 127 (508)
Q Consensus 52 ~l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p----~~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N 127 (508)
.+..|+...|.+..+| .+..+++|+.|+|++|.++...+ +.+++|+|++|++++..|..|+.+++|++|+|++|
T Consensus 45 ~L~~L~l~~n~i~~l~--~l~~l~~L~~L~l~~n~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n 122 (197)
T 4ezg_A 45 SLTYITLANINVTDLT--GIEYAHNIKDLTINNIHATNYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHS 122 (197)
T ss_dssp TCCEEEEESSCCSCCT--TGGGCTTCSEEEEESCCCSCCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSS
T ss_pred CccEEeccCCCccChH--HHhcCCCCCEEEccCCCCCcchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCC
Confidence 3445556667888888 49999999999999998764211 45699999999999888999999999999999999
Q ss_pred cccCcCCchhhhcCCccceecccccc-ccCccccccccccccCCCCccCCCC
Q 045127 128 QLSGDIPVESFSVLANLTFLNLSYNH-FSEMKVSDTKFFQRFNSSSFLHSGL 178 (508)
Q Consensus 128 ~l~g~lp~~~~~~l~~L~~l~l~~N~-l~~~~~~~~~~l~~l~~~~~~~n~~ 178 (508)
++++..| ..++.+++|+.|++++|+ ++. . +.+..+++|+.+++.+|..
T Consensus 123 ~i~~~~~-~~l~~l~~L~~L~L~~n~~i~~-~-~~l~~l~~L~~L~l~~n~i 171 (197)
T 4ezg_A 123 AHDDSIL-TKINTLPKVNSIDLSYNGAITD-I-MPLKTLPELKSLNIQFDGV 171 (197)
T ss_dssp BCBGGGH-HHHTTCSSCCEEECCSCTBCCC-C-GGGGGCSSCCEEECTTBCC
T ss_pred ccCcHhH-HHHhhCCCCCEEEccCCCCccc-c-HhhcCCCCCCEEECCCCCC
Confidence 9997777 889999999999999998 666 3 4678899999999999865
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} | Back alignment and structure |
|---|
Probab=99.33 E-value=3.3e-12 Score=127.29 Aligned_cols=120 Identities=21% Similarity=0.201 Sum_probs=85.0
Q ss_pred cccccCCCCCcccCCCccccCCCCCcCeEeCccCcccccC----CccccEEEcccCcccCCCChhhhccCCccccccccc
Q 045127 52 HLCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYC----PLGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYN 127 (508)
Q Consensus 52 ~l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~----p~~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N 127 (508)
.+..|....|.++.++. +..+++|+.|+|++|.+++.. .+.+++|+|++|++++. ..+..+++|+.|+|++|
T Consensus 222 ~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n 297 (347)
T 4fmz_A 222 RLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDINAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNN 297 (347)
T ss_dssp TCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSS
T ss_pred cCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCChhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCC
Confidence 34555556667777765 777788888888888776521 13557888888888753 45777888888888888
Q ss_pred cccCcCCchhhhcCCccceeccccccccCccccccccccccCCCCccCCCC
Q 045127 128 QLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLHSGL 178 (508)
Q Consensus 128 ~l~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~~~n~~ 178 (508)
++++..| ..+..+++|+.|++++|++++ .++ +..+++|..+++.+|+.
T Consensus 298 ~l~~~~~-~~l~~l~~L~~L~L~~n~l~~-~~~-~~~l~~L~~L~l~~N~i 345 (347)
T 4fmz_A 298 QLGNEDM-EVIGGLTNLTTLFLSQNHITD-IRP-LASLSKMDSADFANQVI 345 (347)
T ss_dssp CCCGGGH-HHHHTCTTCSEEECCSSSCCC-CGG-GGGCTTCSEESSSCC--
T ss_pred cCCCcCh-hHhhccccCCEEEccCCcccc-ccC-hhhhhccceeehhhhcc
Confidence 8875555 777888888888888888887 444 66677888888877753
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* | Back alignment and structure |
|---|
Probab=99.33 E-value=8.4e-13 Score=132.03 Aligned_cols=154 Identities=10% Similarity=-0.004 Sum_probs=118.7
Q ss_pred cCCc-CCCCCccccccCCCCCCcchhcccccccccccccCCCCCcccCCCccccCCCCCcCeEeCccCcccccCCcc-c-
Q 045127 19 IMNN-CIHNPSLKYCNSSSPMDLNEIFKSTIVASHLCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCPLG-I- 95 (508)
Q Consensus 19 ~~~~-c~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~-l- 95 (508)
+|.. |.|....+.|++.....+|..+. ..+..|.+..|.+++||+++|++|++|+.|+|++|++.+.+|.. |
T Consensus 2 Cp~~~C~C~~~~v~C~~~~Lt~iP~~l~-----~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~ 76 (350)
T 4ay9_X 2 CHHRICHCSNRVFLCQESKVTEIPSDLP-----RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFS 76 (350)
T ss_dssp CCCSSSEEETTEEEEESTTCCSCCTTCC-----TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBC
T ss_pred CCCCccEeeCCEEEecCCCCCccCcCcC-----CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhh
Confidence 3544 77777789999877778886553 24555666668899999878999999999999999997766632 2
Q ss_pred ------cEEEcccCcccCCCChhhhccCCccccccccccccCcCCchhhhcCCccceecccc-ccccCcccccccccc-c
Q 045127 96 ------MSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSY-NHFSEMKVSDTKFFQ-R 167 (508)
Q Consensus 96 ------~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp~~~~~~l~~L~~l~l~~-N~l~~~~~~~~~~l~-~ 167 (508)
+.+++++|+|++..|..|..+++|++|++++|+++ .+|+..+....++..|++++ |++..++...+..+. .
T Consensus 77 ~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~-~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~ 155 (350)
T 4ay9_X 77 NLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIK-HLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFE 155 (350)
T ss_dssp SCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCS-SCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSS
T ss_pred cchhhhhhhcccCCcccccCchhhhhccccccccccccccc-cCCchhhcccchhhhhhhccccccccccccchhhcchh
Confidence 56888899999888999999999999999999999 66656677777788888865 677774444555443 4
Q ss_pred cCCCCccCCCC
Q 045127 168 FNSSSFLHSGL 178 (508)
Q Consensus 168 l~~~~~~~n~~ 178 (508)
+..+++.+|..
T Consensus 156 l~~L~L~~N~i 166 (350)
T 4ay9_X 156 SVILWLNKNGI 166 (350)
T ss_dssp CEEEECCSSCC
T ss_pred hhhhccccccc
Confidence 56677777754
|
| >4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.33 E-value=1.2e-12 Score=128.45 Aligned_cols=122 Identities=22% Similarity=0.124 Sum_probs=79.6
Q ss_pred cccccCCCCCcccCCCccccCCCCCcCeEeCccCccccc--C--------CccccEEEcccCcccCCCCh----hhhccC
Q 045127 52 HLCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKY--C--------PLGIMSIDLSNNSLKGAFPI----DVLLCT 117 (508)
Q Consensus 52 ~l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~--~--------p~~l~~L~Ls~N~l~~~~p~----~~~~l~ 117 (508)
.|..|....|.+..++...|+.+++|++|+|++|++.+. + -+.+++|+|++|+++ .+|. .++.++
T Consensus 146 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~ 224 (310)
T 4glp_A 146 GLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAAGV 224 (310)
T ss_dssp CCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHTC
T ss_pred CCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhcCC
Confidence 455566666778888766888888888888888886531 1 024577777777776 2333 245667
Q ss_pred CccccccccccccCcCCchhhhcC---CccceeccccccccCccccccccccccCCCCccCCCC
Q 045127 118 QIQALDLSYNQLSGDIPVESFSVL---ANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLHSGL 178 (508)
Q Consensus 118 ~L~~L~l~~N~l~g~lp~~~~~~l---~~L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~~~n~~ 178 (508)
+|++|+|++|++++.+| ..+..+ ++|+.|++++|+|+. .+... .++|+.+++++|..
T Consensus 225 ~L~~L~Ls~N~l~~~~p-~~~~~~~~~~~L~~L~Ls~N~l~~-lp~~~--~~~L~~L~Ls~N~l 284 (310)
T 4glp_A 225 QPHSLDLSHNSLRATVN-PSAPRCMWSSALNSLNLSFAGLEQ-VPKGL--PAKLRVLDLSSNRL 284 (310)
T ss_dssp CCSSEECTTSCCCCCCC-SCCSSCCCCTTCCCEECCSSCCCS-CCSCC--CSCCSCEECCSCCC
T ss_pred CCCEEECCCCCCCccch-hhHHhccCcCcCCEEECCCCCCCc-hhhhh--cCCCCEEECCCCcC
Confidence 77777777777775556 445554 577777777777776 34333 25666666666654
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=99.32 E-value=1.7e-12 Score=137.92 Aligned_cols=96 Identities=22% Similarity=0.191 Sum_probs=57.1
Q ss_pred ccCCCCCcccCCCccccCCCCCcCeEeCccCcccccCCcc------ccEEEcccCcccCCCChhhhccCCcccccccccc
Q 045127 55 NESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCPLG------IMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQ 128 (508)
Q Consensus 55 ~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~------l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~ 128 (508)
.|+...|.++.+|. |+.+++|+.|+|++|+|+ .+|.. |+.|+|++|+|++ +| .|+++++|++|+|++|+
T Consensus 445 ~L~Ls~n~l~~lp~--~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~ 519 (567)
T 1dce_A 445 VLHLAHKDLTVLCH--LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNR 519 (567)
T ss_dssp EEECTTSCCSSCCC--GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSC
T ss_pred EEEecCCCCCCCcC--ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCC
Confidence 34455555666653 666666666666666665 34533 2566666666664 45 56666666666666666
Q ss_pred ccCcC-CchhhhcCCccceeccccccccC
Q 045127 129 LSGDI-PVESFSVLANLTFLNLSYNHFSE 156 (508)
Q Consensus 129 l~g~l-p~~~~~~l~~L~~l~l~~N~l~~ 156 (508)
|++.. | ..++.+++|+.|+|++|+|++
T Consensus 520 l~~~~~p-~~l~~l~~L~~L~L~~N~l~~ 547 (567)
T 1dce_A 520 LQQSAAI-QPLVSCPRLVLLNLQGNSLCQ 547 (567)
T ss_dssp CCSSSTT-GGGGGCTTCCEEECTTSGGGG
T ss_pred CCCCCCc-HHHhcCCCCCEEEecCCcCCC
Confidence 66333 4 556666666666666666666
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 | Back alignment and structure |
|---|
Probab=99.32 E-value=2.8e-12 Score=127.87 Aligned_cols=91 Identities=20% Similarity=0.271 Sum_probs=76.0
Q ss_pred cccCCCccccCCCCCcCeEeCcc-CcccccCCcc------ccEEEcccCcccCCCChhhhccCCccccccccccccCcCC
Q 045127 62 CVESFPKIDLRSRPKITPLYLSF-NFFWKYCPLG------IMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIP 134 (508)
Q Consensus 62 ~~~~~p~~~~~~l~~L~~L~L~~-N~l~~~~p~~------l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp 134 (508)
.+..||. |..+++|+.|+|++ |+|++..|.. |+.|+|++|+|++..|..|.+|++|++|+|++|+|+ .+|
T Consensus 20 ~l~~ip~--l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~~ 96 (347)
T 2ifg_A 20 ALDSLHH--LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALE-SLS 96 (347)
T ss_dssp CCTTTTT--SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCS-CCC
T ss_pred CCCccCC--CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCccc-eeC
Confidence 5777886 88888999999986 8888765533 488899999999888888999999999999999999 677
Q ss_pred chhhhcCCccceeccccccccC
Q 045127 135 VESFSVLANLTFLNLSYNHFSE 156 (508)
Q Consensus 135 ~~~~~~l~~L~~l~l~~N~l~~ 156 (508)
+..|..++ |+.|+|++|+|..
T Consensus 97 ~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 97 WKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp STTTCSCC-CCEEECCSSCCCC
T ss_pred HHHcccCC-ceEEEeeCCCccC
Confidence 57777665 9999999999986
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* | Back alignment and structure |
|---|
Probab=99.32 E-value=1.3e-12 Score=130.75 Aligned_cols=172 Identities=13% Similarity=0.139 Sum_probs=112.3
Q ss_pred cccccccCCCCCCCCCCcCCcCCCCCccccccCCCCCCcchhcccccccc-------ccc-ccCCCCCcccCCCccccCC
Q 045127 2 VVEDLNNLHPPPDFNSTIMNNCIHNPSLKYCNSSSPMDLNEIFKSTIVAS-------HLC-NESKNPNCVESFPKIDLRS 73 (508)
Q Consensus 2 ~~~~l~~l~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~l~~~~~~~~~~~-------~l~-~L~~~~n~~~~~p~~~~~~ 73 (508)
++.++..|++..|....+|...+.. +.++..+++..+......+. .+. .+....|.+..++++.|.+
T Consensus 28 l~~~l~~L~Ls~N~i~~i~~~~f~~-----l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~ 102 (350)
T 4ay9_X 28 LPRNAIELRFVLTKLRVIQKGAFSG-----FGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQN 102 (350)
T ss_dssp CCTTCSEEEEESCCCSEECTTSSTT-----CTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCC
T ss_pred cCCCCCEEEccCCcCCCcCHHHHcC-----CCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhh
Confidence 4456777888888888887654332 33333333333221111110 111 1223347888998778999
Q ss_pred CCCcCeEeCccCcccccCCc--------------------------------cccEEEcccCcccCCCChhhhccCCccc
Q 045127 74 RPKITPLYLSFNFFWKYCPL--------------------------------GIMSIDLSNNSLKGAFPIDVLLCTQIQA 121 (508)
Q Consensus 74 l~~L~~L~L~~N~l~~~~p~--------------------------------~l~~L~Ls~N~l~~~~p~~~~~l~~L~~ 121 (508)
+++|+.|++++|+|+...+. .++.|+|++|+|+.. |.......+|+.
T Consensus 103 l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~i-~~~~f~~~~L~~ 181 (350)
T 4ay9_X 103 LPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEI-HNSAFNGTQLDE 181 (350)
T ss_dssp CTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEE-CTTSSTTEEEEE
T ss_pred ccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccCC-ChhhccccchhH
Confidence 99999999999998743221 125688888888844 444445567888
Q ss_pred ccccc-ccccCcCCchhhhcCCccceeccccccccCccccccccccccCCCCccCCCCCC
Q 045127 122 LDLSY-NQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLHSGLFP 180 (508)
Q Consensus 122 L~l~~-N~l~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~~~n~~~~ 180 (508)
|++++ |+++ .||.+.|..+++|+.||+++|+|+.++...+..+++|..+...+...+|
T Consensus 182 l~l~~~n~l~-~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L~~L~~l~~~~l~~lP 240 (350)
T 4ay9_X 182 LNLSDNNNLE-ELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTYNLKKLP 240 (350)
T ss_dssp EECTTCTTCC-CCCTTTTTTEECCSEEECTTSCCCCCCSSSCTTCCEEECTTCTTCCCCC
T ss_pred HhhccCCccc-CCCHHHhccCcccchhhcCCCCcCccChhhhccchHhhhccCCCcCcCC
Confidence 88875 5555 8887788889999999999999998555556666666666655544444
|
| >4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C} | Back alignment and structure |
|---|
Probab=99.31 E-value=1.6e-12 Score=142.31 Aligned_cols=96 Identities=24% Similarity=0.314 Sum_probs=44.9
Q ss_pred cCCCCCcccCCCccccCCCCCcCeEeCccCcccccCCcc------ccEEEcccCcccCCCChhhhccCCccccccccccc
Q 045127 56 ESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCPLG------IMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQL 129 (508)
Q Consensus 56 L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~------l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l 129 (508)
|++..|.+..+|. .+.++++|+.|+|++|.|+ .+|.. |++|+|++|+|+ .+|..|++|++|++|+|++|.|
T Consensus 229 L~Ls~n~l~~l~~-~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l 305 (727)
T 4b8c_D 229 LDLSNLQIFNISA-NIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMV 305 (727)
T ss_dssp EECTTSCCSCCCG-GGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCC
T ss_pred EECCCCCCCCCCh-hhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCC
Confidence 3333344444444 3334445555555555444 33432 244555555544 3444444555555555555544
Q ss_pred cCcCCchhhhcCCccceeccccccccC
Q 045127 130 SGDIPVESFSVLANLTFLNLSYNHFSE 156 (508)
Q Consensus 130 ~g~lp~~~~~~l~~L~~l~l~~N~l~~ 156 (508)
+ .+| ..|+.|++|+.|+|++|+|++
T Consensus 306 ~-~lp-~~~~~l~~L~~L~L~~N~l~~ 330 (727)
T 4b8c_D 306 T-TLP-WEFGNLCNLQFLGVEGNPLEK 330 (727)
T ss_dssp C-CCC-SSTTSCTTCCCEECTTSCCCS
T ss_pred C-ccC-hhhhcCCCccEEeCCCCccCC
Confidence 4 444 334444555555555555544
|
| >4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.31 E-value=5.3e-13 Score=131.10 Aligned_cols=122 Identities=20% Similarity=0.247 Sum_probs=96.9
Q ss_pred cccccCCCCCcccC---CCc-cccCCCCCcCeEeCccCcccccC---------CccccEEEcccCcccCCCChhhhcc--
Q 045127 52 HLCNESKNPNCVES---FPK-IDLRSRPKITPLYLSFNFFWKYC---------PLGIMSIDLSNNSLKGAFPIDVLLC-- 116 (508)
Q Consensus 52 ~l~~L~~~~n~~~~---~p~-~~~~~l~~L~~L~L~~N~l~~~~---------p~~l~~L~Ls~N~l~~~~p~~~~~l-- 116 (508)
.|..|+...|.+.. ++. ..++.+++|++|+|++|+++... ...+++|+|++|++++..|..+..+
T Consensus 170 ~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ 249 (310)
T 4glp_A 170 ALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMW 249 (310)
T ss_dssp TCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCC
T ss_pred CCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccC
Confidence 35555566665433 332 13578999999999999997421 1466999999999998889888877
Q ss_pred -CCccccccccccccCcCCchhhhcCCccceeccccccccCccccccccccccCCCCccCCCCC
Q 045127 117 -TQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLHSGLF 179 (508)
Q Consensus 117 -~~L~~L~l~~N~l~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~~~n~~~ 179 (508)
++|++|+|++|+|+ .+| ..+. ++|+.|+|++|+|+++ |.+..+++|+.+++.+|++.
T Consensus 250 ~~~L~~L~Ls~N~l~-~lp-~~~~--~~L~~L~Ls~N~l~~~--~~~~~l~~L~~L~L~~N~l~ 307 (310)
T 4glp_A 250 SSALNSLNLSFAGLE-QVP-KGLP--AKLRVLDLSSNRLNRA--PQPDELPEVDNLTLDGNPFL 307 (310)
T ss_dssp CTTCCCEECCSSCCC-SCC-SCCC--SCCSCEECCSCCCCSC--CCTTSCCCCSCEECSSTTTS
T ss_pred cCcCCEEECCCCCCC-chh-hhhc--CCCCEEECCCCcCCCC--chhhhCCCccEEECcCCCCC
Confidence 69999999999999 899 5443 7999999999999994 33677899999999999864
|
| >1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=99.30 E-value=2.6e-12 Score=122.40 Aligned_cols=148 Identities=9% Similarity=-0.038 Sum_probs=110.2
Q ss_pred HhhcCCCCCceeeecCCeEEEEEEECCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCC--ccceeeEEecCCeeEE
Q 045127 235 AATNGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKN--LIRVLGWNNSRRTRAI 312 (508)
Q Consensus 235 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~~~~~~~~~~~~~l 312 (508)
....++......+.|..+.||++...+|+.+++|+.... ....+.+|+.+++.+.+.+ +.+++++...++..++
T Consensus 17 ~~~~~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~----~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~ 92 (264)
T 1nd4_A 17 ERLFGYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG----ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWL 92 (264)
T ss_dssp TTTTTCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC----TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEE
T ss_pred HhcCCCceEecccCCCCceEEEEecCCCCeEEEEeCCcc----cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEE
Confidence 334445543333456669999998777888999998643 1245778999998885444 5668888887778899
Q ss_pred EEeecCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCC-------------------------------------
Q 045127 313 VTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWP------------------------------------- 355 (508)
Q Consensus 313 v~e~~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~------------------------------------- 355 (508)
||||++|.++. .. ..+ ...++.++++.|+.||+. .
T Consensus 93 v~e~i~G~~l~--~~--~~~---~~~~~~~l~~~l~~lh~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (264)
T 1nd4_A 93 LLGEVPGQDLL--SS--HLA---PAEKVSIMADAMRRLHTL-DPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQG 164 (264)
T ss_dssp EEECCSSEETT--TS--CCC---HHHHHHHHHHHHHHHTTS-CGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTT
T ss_pred EEEecCCcccC--cC--cCC---HhHHHHHHHHHHHHHhCC-CCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccC
Confidence 99999998884 22 122 236778888899999875 3
Q ss_pred ---------------------ccccCCCCCCEEecCCCceEEeeccCCCCCCCcchhhHH
Q 045127 356 ---------------------EVDYDLRTGSVLLTDNLEPLISRFKIEYQHRSTKYVYKF 394 (508)
Q Consensus 356 ---------------------iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~Dv~Sl 394 (508)
++|||++|.||++++++.+.|+||+.+....+..|+-.+
T Consensus 165 ~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~g~~~~Dla~~ 224 (264)
T 1nd4_A 165 LAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVADRYQDIALA 224 (264)
T ss_dssp CCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEEEETHHHHHHH
T ss_pred ccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcccCChHHHHHHH
Confidence 899999999999987766779999998877777675443
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.30 E-value=4.1e-12 Score=121.72 Aligned_cols=118 Identities=17% Similarity=0.217 Sum_probs=98.1
Q ss_pred cccccCCCCCcccCCCccccCCCCCcCeEeCccCcccccCC---ccccEEEcccCcccCCCChhhhccCCcccccccccc
Q 045127 52 HLCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCP---LGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQ 128 (508)
Q Consensus 52 ~l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p---~~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~ 128 (508)
.+..|....|.++.+++ ++.+++|+.|+|++|++++..+ ..+++|+|++|++++. | .+..+++|+.|+|++|+
T Consensus 64 ~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~l~~~~~~~L~~L~L~~N~l~~~-~-~l~~l~~L~~L~Ls~N~ 139 (263)
T 1xeu_A 64 NLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKNLNGIPSACLSRLFLDNNELRDT-D-SLIHLKNLEILSIRNNK 139 (263)
T ss_dssp TCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCSCCTTCCCSSCCEEECCSSCCSBS-G-GGTTCTTCCEEECTTSC
T ss_pred CCCEEECCCCccCCChh--hccCCCCCEEECCCCccCCcCccccCcccEEEccCCccCCC-h-hhcCcccccEEECCCCc
Confidence 45666777788888886 8999999999999999986321 4679999999999863 4 68999999999999999
Q ss_pred ccCcCCchhhhcCCccceeccccccccCccccccccccccCCCCccCCCC
Q 045127 129 LSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLHSGL 178 (508)
Q Consensus 129 l~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~~~n~~ 178 (508)
++ .+| .+..+++|+.|++++|++++ . +.+..+++|..+++.+|+.
T Consensus 140 i~-~~~--~l~~l~~L~~L~L~~N~i~~-~-~~l~~l~~L~~L~l~~N~~ 184 (263)
T 1xeu_A 140 LK-SIV--MLGFLSKLEVLDLHGNEITN-T-GGLTRLKKVNWIDLTGQKC 184 (263)
T ss_dssp CC-BCG--GGGGCTTCCEEECTTSCCCB-C-TTSTTCCCCCEEEEEEEEE
T ss_pred CC-CCh--HHccCCCCCEEECCCCcCcc-h-HHhccCCCCCEEeCCCCcc
Confidence 99 566 58889999999999999998 4 6677888899999988865
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.30 E-value=4.8e-12 Score=134.78 Aligned_cols=123 Identities=20% Similarity=0.202 Sum_probs=102.3
Q ss_pred cccccCCCCCcccCCCc--cccCCCCCcCeEeCccCcccccCCc-------cccEEEcccCcccCCCChhhhccCCcccc
Q 045127 52 HLCNESKNPNCVESFPK--IDLRSRPKITPLYLSFNFFWKYCPL-------GIMSIDLSNNSLKGAFPIDVLLCTQIQAL 122 (508)
Q Consensus 52 ~l~~L~~~~n~~~~~p~--~~~~~l~~L~~L~L~~N~l~~~~p~-------~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L 122 (508)
.+..|....|.++.++. ..|+++++|+.|+|++|++++.+|. .+++|+|++|++++.+|..+. ++|++|
T Consensus 378 ~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L 455 (562)
T 3a79_B 378 RLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVL 455 (562)
T ss_dssp SCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEE
T ss_pred CCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEE
Confidence 45566667788887763 3689999999999999999885663 458999999999887776554 799999
Q ss_pred ccccccccCcCCchhhhcCCccceeccccccccCccccc-cccccccCCCCccCCCCC
Q 045127 123 DLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSD-TKFFQRFNSSSFLHSGLF 179 (508)
Q Consensus 123 ~l~~N~l~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~~l~~l~~~~~~~n~~~ 179 (508)
+|++|+|+ .+| ..+..+++|+.|++++|+|++ .++. +..++++..+++.+|++.
T Consensus 456 ~L~~N~l~-~ip-~~~~~l~~L~~L~L~~N~l~~-l~~~~~~~l~~L~~L~l~~N~~~ 510 (562)
T 3a79_B 456 DLHNNRIM-SIP-KDVTHLQALQELNVASNQLKS-VPDGVFDRLTSLQYIWLHDNPWD 510 (562)
T ss_dssp ECCSSCCC-CCC-TTTTSSCCCSEEECCSSCCCC-CCTTSTTTCTTCCCEECCSCCBC
T ss_pred ECCCCcCc-ccC-hhhcCCCCCCEEECCCCCCCC-CCHHHHhcCCCCCEEEecCCCcC
Confidence 99999999 999 555599999999999999998 5554 888999999999999874
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A | Back alignment and structure |
|---|
Probab=99.29 E-value=2.6e-12 Score=111.76 Aligned_cols=103 Identities=19% Similarity=0.191 Sum_probs=90.2
Q ss_pred CCCCcCeEeCccCccc-ccCCcc------ccEEEcccCcccCCCChhhhccCCccccccccccccCcCCchhhhcCCccc
Q 045127 73 SRPKITPLYLSFNFFW-KYCPLG------IMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLT 145 (508)
Q Consensus 73 ~l~~L~~L~L~~N~l~-~~~p~~------l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp~~~~~~l~~L~ 145 (508)
..++|+.|++++|.++ +.+|.. +++|+|++|++++. ..++.+++|++|+|++|++++.+| ..+..+++|+
T Consensus 15 ~~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~-~~~~~l~~L~ 91 (149)
T 2je0_A 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLE-VLAEKCPNLT 91 (149)
T ss_dssp CGGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTH-HHHHHCTTCC
T ss_pred CCccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHH-HHhhhCCCCC
Confidence 3478999999999998 667744 49999999999966 789999999999999999996688 8888899999
Q ss_pred eeccccccccCcc-ccccccccccCCCCccCCCC
Q 045127 146 FLNLSYNHFSEMK-VSDTKFFQRFNSSSFLHSGL 178 (508)
Q Consensus 146 ~l~l~~N~l~~~~-~~~~~~l~~l~~~~~~~n~~ 178 (508)
.|++++|++++++ +..+..+++|..+++.+|+.
T Consensus 92 ~L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l 125 (149)
T 2je0_A 92 HLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEV 125 (149)
T ss_dssp EEECTTSCCCSHHHHGGGGGCTTCCEEECTTCGG
T ss_pred EEECCCCcCCChHHHHHHhhCCCCCEEeCcCCcc
Confidence 9999999999943 37788899999999999964
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.29 E-value=3.8e-12 Score=135.59 Aligned_cols=138 Identities=19% Similarity=0.189 Sum_probs=108.9
Q ss_pred cccccCCCCCCcchhcccccccccccccCCCCCcccCCCccccCCCCCcCeEeCccCcccccCCcc------ccEEEccc
Q 045127 29 LKYCNSSSPMDLNEIFKSTIVASHLCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCPLG------IMSIDLSN 102 (508)
Q Consensus 29 ~~~~~~~~~~~l~~~~~~~~~~~~l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~------l~~L~Ls~ 102 (508)
...|+......+|.... ..+..|+...|.+..+++.+|+++++|++|+|++|+|++..|.. +++|+|++
T Consensus 35 ~l~ls~~~L~~ip~~~~-----~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 109 (562)
T 3a79_B 35 MVDYSNRNLTHVPKDLP-----PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSH 109 (562)
T ss_dssp EEECTTSCCCSCCTTSC-----TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTT
T ss_pred EEEcCCCCCccCCCCCC-----CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCC
Confidence 45566555556665432 35666777778899999779999999999999999999876744 49999999
Q ss_pred CcccCCCChhhhccCCccccccccccccC-cCCchhhhcCCccceeccccccccCcccccccccccc--CCCCccCCCC
Q 045127 103 NSLKGAFPIDVLLCTQIQALDLSYNQLSG-DIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRF--NSSSFLHSGL 178 (508)
Q Consensus 103 N~l~~~~p~~~~~l~~L~~L~l~~N~l~g-~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l--~~~~~~~n~~ 178 (508)
|+|+ .+|.. .+++|++|+|++|++++ .+| ..|+++++|+.|++++|++++. .+..++++ +.+++.+|..
T Consensus 110 N~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p-~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l 181 (562)
T 3a79_B 110 NRLQ-NISCC--PMASLRHLDLSFNDFDVLPVC-KEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSY 181 (562)
T ss_dssp SCCC-EECSC--CCTTCSEEECCSSCCSBCCCC-GGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSC
T ss_pred CcCC-ccCcc--ccccCCEEECCCCCccccCch-HhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeecccc
Confidence 9999 56766 89999999999999994 345 7899999999999999999873 33445555 7778877765
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.28 E-value=1.4e-12 Score=128.53 Aligned_cols=99 Identities=20% Similarity=0.187 Sum_probs=46.0
Q ss_pred CCcCeEeCccCcccccCCc------cccEEEcccCcccCCCChhh-hccCCccccccccccccCcCCchhhhcCCcccee
Q 045127 75 PKITPLYLSFNFFWKYCPL------GIMSIDLSNNSLKGAFPIDV-LLCTQIQALDLSYNQLSGDIPVESFSVLANLTFL 147 (508)
Q Consensus 75 ~~L~~L~L~~N~l~~~~p~------~l~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~l~~N~l~g~lp~~~~~~l~~L~~l 147 (508)
++|+.|+|++|++++..|. .+++|+|++|++++..|..+ ..+++|++|+|++|+++ .+| . ...+++|+.|
T Consensus 120 ~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~-~~~-~-~~~l~~L~~L 196 (317)
T 3o53_A 120 QGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIY-DVK-G-QVVFAKLKTL 196 (317)
T ss_dssp SSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCC-EEE-C-CCCCTTCCEE
T ss_pred CCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCc-ccc-c-ccccccCCEE
Confidence 3444444444444443221 22445555555544444443 24455555555555554 333 1 1224555555
Q ss_pred ccccccccCccccccccccccCCCCccCCC
Q 045127 148 NLSYNHFSEMKVSDTKFFQRFNSSSFLHSG 177 (508)
Q Consensus 148 ~l~~N~l~~~~~~~~~~l~~l~~~~~~~n~ 177 (508)
++++|++++ .++.+..+++|+.+++.+|.
T Consensus 197 ~Ls~N~l~~-l~~~~~~l~~L~~L~L~~N~ 225 (317)
T 3o53_A 197 DLSSNKLAF-MGPEFQSAAGVTWISLRNNK 225 (317)
T ss_dssp ECCSSCCCE-ECGGGGGGTTCSEEECTTSC
T ss_pred ECCCCcCCc-chhhhcccCcccEEECcCCc
Confidence 555555555 33444455555555555554
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A | Back alignment and structure |
|---|
Probab=99.28 E-value=4.9e-12 Score=112.36 Aligned_cols=103 Identities=20% Similarity=0.176 Sum_probs=90.2
Q ss_pred CCCCcCeEeCccCccc-ccCCcc------ccEEEcccCcccCCCChhhhccCCccccccccccccCcCCchhhhcCCccc
Q 045127 73 SRPKITPLYLSFNFFW-KYCPLG------IMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLT 145 (508)
Q Consensus 73 ~l~~L~~L~L~~N~l~-~~~p~~------l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp~~~~~~l~~L~ 145 (508)
..++|+.|+|++|.++ +.+|.. +++|+|++|++++. ..|..+++|++|+|++|++++.+| ..+..+++|+
T Consensus 22 ~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~ 98 (168)
T 2ell_A 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLD-MLAEKLPNLT 98 (168)
T ss_dssp CTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCC-HHHHHCTTCC
T ss_pred CcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHH-HHHhhCCCCC
Confidence 3478999999999998 667754 49999999999966 789999999999999999996677 8888899999
Q ss_pred eeccccccccCccc-cccccccccCCCCccCCCC
Q 045127 146 FLNLSYNHFSEMKV-SDTKFFQRFNSSSFLHSGL 178 (508)
Q Consensus 146 ~l~l~~N~l~~~~~-~~~~~l~~l~~~~~~~n~~ 178 (508)
.|++++|++++++. +.+..+++|..+++.+|+.
T Consensus 99 ~L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l 132 (168)
T 2ell_A 99 HLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEV 132 (168)
T ss_dssp EEECBSSSCCSSGGGGGGSSCSCCCEEECCSSGG
T ss_pred EEeccCCccCcchhHHHHhcCCCCCEEEeeCCcC
Confidence 99999999999433 6778899999999999964
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.27 E-value=4.1e-12 Score=133.83 Aligned_cols=124 Identities=18% Similarity=0.123 Sum_probs=100.0
Q ss_pred cccccCCCCCcccCCCc--cccCCCCCcCeEeCccCcccccCCc-------cccEEEcccCcccCCCChhhhccCCcccc
Q 045127 52 HLCNESKNPNCVESFPK--IDLRSRPKITPLYLSFNFFWKYCPL-------GIMSIDLSNNSLKGAFPIDVLLCTQIQAL 122 (508)
Q Consensus 52 ~l~~L~~~~n~~~~~p~--~~~~~l~~L~~L~L~~N~l~~~~p~-------~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L 122 (508)
.|..|....|.++.++. ..|+.+++|+.|+|++|++++.+|. .+++|+|++|++++.+|..+. ++|++|
T Consensus 349 ~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L 426 (520)
T 2z7x_B 349 ELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVL 426 (520)
T ss_dssp SCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEE
T ss_pred CCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEE
Confidence 45566666677775442 2688999999999999999875553 458999999999887776664 789999
Q ss_pred ccccccccCcCCchhhhcCCccceeccccccccCccccccccccccCCCCccCCCCC
Q 045127 123 DLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLHSGLF 179 (508)
Q Consensus 123 ~l~~N~l~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~~~n~~~ 179 (508)
+|++|+++ .+| ..+..+++|+.|++++|+|++++...+..+++|..+++.+|++.
T Consensus 427 ~Ls~N~l~-~ip-~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~ 481 (520)
T 2z7x_B 427 DLHSNKIK-SIP-KQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWD 481 (520)
T ss_dssp ECCSSCCC-CCC-GGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred ECCCCccc-ccc-hhhhcCCCCCEEECCCCcCCccCHHHhccCCcccEEECcCCCCc
Confidence 99999999 999 55669999999999999999843334778899999999999874
|
| >4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C} | Back alignment and structure |
|---|
Probab=99.26 E-value=1.1e-12 Score=143.70 Aligned_cols=114 Identities=17% Similarity=0.115 Sum_probs=90.3
Q ss_pred CCcccCCCccccCCCCCcCeEeCccCcccccCCc------cccEEEcccCcccCCCChhhhccCCccccccccccccCcC
Q 045127 60 PNCVESFPKIDLRSRPKITPLYLSFNFFWKYCPL------GIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDI 133 (508)
Q Consensus 60 ~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~------~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~l 133 (508)
.|.+...| ..|..+++|+.|+|++|.|.. +|. .|++|+|++|+|+ .+|..|++|++|++|+|++|+|+ .+
T Consensus 210 ~n~~~~~~-~~~~~l~~L~~L~Ls~n~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~l 285 (727)
T 4b8c_D 210 ENRMVMPK-DSKYDDQLWHALDLSNLQIFN-ISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SL 285 (727)
T ss_dssp -------------CCCCCCEEECTTSCCSC-CCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SC
T ss_pred ccceecCh-hhhccCCCCcEEECCCCCCCC-CChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-cc
Confidence 35555344 489999999999999999974 553 3489999999999 88999999999999999999999 89
Q ss_pred CchhhhcCCccceeccccccccCccccccccccccCCCCccCCCCC
Q 045127 134 PVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLHSGLF 179 (508)
Q Consensus 134 p~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~~~n~~~ 179 (508)
| ..|+.|++|+.|+|++|.|+. .+..++.+++|..+++.+|.+.
T Consensus 286 p-~~~~~l~~L~~L~L~~N~l~~-lp~~~~~l~~L~~L~L~~N~l~ 329 (727)
T 4b8c_D 286 P-AELGSCFQLKYFYFFDNMVTT-LPWEFGNLCNLQFLGVEGNPLE 329 (727)
T ss_dssp C-SSGGGGTTCSEEECCSSCCCC-CCSSTTSCTTCCCEECTTSCCC
T ss_pred C-hhhcCCCCCCEEECCCCCCCc-cChhhhcCCCccEEeCCCCccC
Confidence 8 788999999999999999997 6777888999999999998764
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A | Back alignment and structure |
|---|
Probab=99.25 E-value=1.7e-11 Score=119.15 Aligned_cols=118 Identities=19% Similarity=0.225 Sum_probs=92.7
Q ss_pred cccccCCCCCcccCCCccccCCCCCcCeEeCccCcccccCC----ccccEEEcccCcccCCCChhhhccCCccccccccc
Q 045127 52 HLCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCP----LGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYN 127 (508)
Q Consensus 52 ~l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p----~~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N 127 (508)
.+..|....|.++.+++ +..+++|+.|+|++|.+++..+ ..+++|+|++|++++. ..+..+++|+.|+|++|
T Consensus 69 ~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n 144 (291)
T 1h6t_A 69 NVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNN 144 (291)
T ss_dssp TCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCGGGGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSS
T ss_pred CCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCCChhhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCC
Confidence 45556666778888875 8888899999999998876211 3568899999998853 46888899999999999
Q ss_pred cccCcCCchhhhcCCccceeccccccccCccccccccccccCCCCccCCCC
Q 045127 128 QLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLHSGL 178 (508)
Q Consensus 128 ~l~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~~~n~~ 178 (508)
+++ .++ .+..+++|+.|++++|++++ .++ +..+++|..+++.+|..
T Consensus 145 ~l~-~~~--~l~~l~~L~~L~L~~N~l~~-~~~-l~~l~~L~~L~L~~N~i 190 (291)
T 1h6t_A 145 KIT-DIT--VLSRLTKLDTLSLEDNQISD-IVP-LAGLTKLQNLYLSKNHI 190 (291)
T ss_dssp CCC-CCG--GGGGCTTCSEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCC
T ss_pred cCC-cch--hhccCCCCCEEEccCCcccc-chh-hcCCCccCEEECCCCcC
Confidence 988 554 57888999999999999988 444 77788888888888864
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.25 E-value=1.6e-12 Score=127.73 Aligned_cols=104 Identities=16% Similarity=0.069 Sum_probs=65.8
Q ss_pred CCCCcCeEeCccCcccccCCcc--------ccEEEcccCcccCCCChhhhcc-----CCccccccccccccCcCCchhhh
Q 045127 73 SRPKITPLYLSFNFFWKYCPLG--------IMSIDLSNNSLKGAFPIDVLLC-----TQIQALDLSYNQLSGDIPVESFS 139 (508)
Q Consensus 73 ~l~~L~~L~L~~N~l~~~~p~~--------l~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L~l~~N~l~g~lp~~~~~ 139 (508)
++++|++|+|++|++++.+|.. +++|+|++|++++. |..++.+ ++|++|+|++|++++..| ..|+
T Consensus 93 ~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~-~~~~ 170 (312)
T 1wwl_A 93 GISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSC-EQVR 170 (312)
T ss_dssp TTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCT-TTCC
T ss_pred CcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchH-HHhc
Confidence 5667777777777776655532 36777777777755 6666666 677777777777763333 6667
Q ss_pred cCCccceeccccccccCc--ccccc--ccccccCCCCccCCCC
Q 045127 140 VLANLTFLNLSYNHFSEM--KVSDT--KFFQRFNSSSFLHSGL 178 (508)
Q Consensus 140 ~l~~L~~l~l~~N~l~~~--~~~~~--~~l~~l~~~~~~~n~~ 178 (508)
.+++|+.|++++|++.+. .++.. ..+++|+.+++.+|..
T Consensus 171 ~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l 213 (312)
T 1wwl_A 171 VFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGM 213 (312)
T ss_dssp CCSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCC
T ss_pred cCCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcC
Confidence 777777777777776652 12222 4566666666666643
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.24 E-value=1.4e-11 Score=129.83 Aligned_cols=103 Identities=25% Similarity=0.250 Sum_probs=91.8
Q ss_pred cccccCCCCCcccC-CCccccCCCCCcCeEeCccCcccccCC----ccccEEEcccCcccCCCChhhhccCCcccccccc
Q 045127 52 HLCNESKNPNCVES-FPKIDLRSRPKITPLYLSFNFFWKYCP----LGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSY 126 (508)
Q Consensus 52 ~l~~L~~~~n~~~~-~p~~~~~~l~~L~~L~L~~N~l~~~~p----~~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~ 126 (508)
.|..|+...|.+.. +|...+..+++|+.|+|++|++++..| ..++.|+|++|+++ .+|..+..+++|++|+|++
T Consensus 375 ~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~ 453 (520)
T 2z7x_B 375 SLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLPPRIKVLDLHSNKIK-SIPKQVVKLEALQELNVAS 453 (520)
T ss_dssp TCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCCTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCS
T ss_pred CCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhcccCCEEECCCCccc-ccchhhhcCCCCCEEECCC
Confidence 45666777788887 998669999999999999999987655 56799999999999 8898888999999999999
Q ss_pred ccccCcCCchhhhcCCccceeccccccccC
Q 045127 127 NQLSGDIPVESFSVLANLTFLNLSYNHFSE 156 (508)
Q Consensus 127 N~l~g~lp~~~~~~l~~L~~l~l~~N~l~~ 156 (508)
|+|+ .+|...|..+++|+.|++++|++++
T Consensus 454 N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c 482 (520)
T 2z7x_B 454 NQLK-SVPDGIFDRLTSLQKIWLHTNPWDC 482 (520)
T ss_dssp SCCC-CCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CcCC-ccCHHHhccCCcccEEECcCCCCcc
Confidence 9999 8995569999999999999999998
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 | Back alignment and structure |
|---|
Probab=99.24 E-value=4.8e-12 Score=113.44 Aligned_cols=104 Identities=17% Similarity=0.092 Sum_probs=91.0
Q ss_pred ccCCCCCcCeEeCccCcccccCC------ccccEEEcccCcccCCCChhhhccCCccccccccccccCcCCchhhhcCCc
Q 045127 70 DLRSRPKITPLYLSFNFFWKYCP------LGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLAN 143 (508)
Q Consensus 70 ~~~~l~~L~~L~L~~N~l~~~~p------~~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp~~~~~~l~~ 143 (508)
.+.++++|+.|+|++|+++. +| +.+++|+|++|++++. ..|..+++|++|+|++|+|+ .+|+..|..+++
T Consensus 14 ~~~~~~~L~~L~l~~n~l~~-i~~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~ 89 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIPV-IENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRIC-RIGEGLDQALPD 89 (176)
T ss_dssp EEECTTSCEEEECTTSCCCS-CCCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCC-EECSCHHHHCTT
T ss_pred hcCCcCCceEEEeeCCCCch-hHHhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCccc-ccCcchhhcCCC
Confidence 47788999999999999985 34 3679999999999975 68999999999999999999 677577799999
Q ss_pred cceeccccccccCcccc--ccccccccCCCCccCCCC
Q 045127 144 LTFLNLSYNHFSEMKVS--DTKFFQRFNSSSFLHSGL 178 (508)
Q Consensus 144 L~~l~l~~N~l~~~~~~--~~~~l~~l~~~~~~~n~~ 178 (508)
|+.|++++|+|+. .++ .+..+++|..+++.+|+.
T Consensus 90 L~~L~L~~N~i~~-~~~~~~l~~l~~L~~L~l~~N~i 125 (176)
T 1a9n_A 90 LTELILTNNSLVE-LGDLDPLASLKSLTYLCILRNPV 125 (176)
T ss_dssp CCEEECCSCCCCC-GGGGGGGGGCTTCCEEECCSSGG
T ss_pred CCEEECCCCcCCc-chhhHhhhcCCCCCEEEecCCCC
Confidence 9999999999988 444 677889999999999975
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A | Back alignment and structure |
|---|
Probab=99.23 E-value=3.1e-11 Score=124.95 Aligned_cols=116 Identities=18% Similarity=0.171 Sum_probs=97.4
Q ss_pred ccccccCCCCCcccCCCccccCCCCCcCeEeCccCcccccCC---ccccEEEcccCcccCCCChhhhccCCccccccccc
Q 045127 51 SHLCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCP---LGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYN 127 (508)
Q Consensus 51 ~~l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p---~~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N 127 (508)
..+..|....|.++.+| +|+++++|++|++++|++++ +| ..+++|+|++|++++ +| .|+++++|++|++++|
T Consensus 131 ~~L~~L~L~~n~l~~lp--~~~~l~~L~~L~l~~N~l~~-lp~~~~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N 205 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEKLP--ELQNSSFLKIIDVDNNSLKK-LPDLPPSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNN 205 (454)
T ss_dssp TTCCEEECCSSCCSSCC--CCTTCTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSS
T ss_pred CCCCEEECcCCCCCCCc--ccCCCCCCCEEECCCCcCcc-cCCCcccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCC
Confidence 35666777778899998 49999999999999999987 44 467999999999996 67 6999999999999999
Q ss_pred cccCcCCchhhhcCCccceeccccccccCccccccccccccCCCCccCCCC
Q 045127 128 QLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLHSGL 178 (508)
Q Consensus 128 ~l~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~~~n~~ 178 (508)
+++ .+| .. .++|+.|++++|+++. .+ .+..+++++.+++.+|..
T Consensus 206 ~l~-~l~-~~---~~~L~~L~l~~n~l~~-lp-~~~~l~~L~~L~l~~N~l 249 (454)
T 1jl5_A 206 SLK-KLP-DL---PLSLESIVAGNNILEE-LP-ELQNLPFLTTIYADNNLL 249 (454)
T ss_dssp CCS-SCC-CC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCC
T ss_pred cCC-cCC-CC---cCcccEEECcCCcCCc-cc-ccCCCCCCCEEECCCCcC
Confidence 999 577 32 3589999999999996 43 577888899999888865
|
| >3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134} | Back alignment and structure |
|---|
Probab=99.22 E-value=2.1e-11 Score=122.24 Aligned_cols=151 Identities=7% Similarity=0.001 Sum_probs=113.8
Q ss_pred CCceeeecCCeEEEEEEECCCCEEEEEEec--CCCCHHHHHHHHHHHHHHhhcC--CCCccceeeEEecC---CeeEEEE
Q 045127 242 KKNLVGKNEGAAIYKGILRDGTRVKIEIYK--GDVSREIRDEFVEECKLLVQFQ--HKNLIRVLGWNNSR---RTRAIVT 314 (508)
Q Consensus 242 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~--~~~~~~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~---~~~~lv~ 314 (508)
..+.++.|.++.||+.... +..+++|+.. ..........+.+|+.+++.+. +..++++++++.+. +..++||
T Consensus 42 ~~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vm 120 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIM 120 (359)
T ss_dssp EEEECCC-CCSCEEEEECS-SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEE
T ss_pred eEEEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEE
Confidence 4577899999999999875 4678888875 3322223457889999999986 45688899888766 4479999
Q ss_pred eecCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhC-----------------------------------------
Q 045127 315 EWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQ----------------------------------------- 353 (508)
Q Consensus 315 e~~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~----------------------------------------- 353 (508)
||++|..+.+.. -..++..++..++.++++.|+.||+.
T Consensus 121 e~v~G~~l~~~~-~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (359)
T 3dxp_A 121 EFVSGRVLWDQS-LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAMDS 199 (359)
T ss_dssp ECCCCBCCCCTT-CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHHHH
T ss_pred EecCCeecCCCc-cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHHHH
Confidence 999998775422 23467888899999999999999972
Q ss_pred ----------------CCccccCCCCCCEEecCCCc--eEEeeccCCCCCCCcchhhHH
Q 045127 354 ----------------WPEVDYDLRTGSVLLTDNLE--PLISRFKIEYQHRSTKYVYKF 394 (508)
Q Consensus 354 ----------------~~iiH~Dlkp~NIll~~~~~--~kl~Dfg~~~~~~~~~Dv~Sl 394 (508)
..++|||++|.||+++.++. +.|+||+.+....+..|+..+
T Consensus 200 ~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g~p~~DLa~~ 258 (359)
T 3dxp_A 200 LMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLGHPMGDFGYH 258 (359)
T ss_dssp HHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEECHHHHHHHH
T ss_pred HHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccCCHHHHHHHH
Confidence 26899999999999997653 689999998877777776543
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A | Back alignment and structure |
|---|
Probab=99.22 E-value=1.5e-11 Score=127.81 Aligned_cols=118 Identities=24% Similarity=0.272 Sum_probs=69.5
Q ss_pred cccccCCCCCcccCCCccccCCCCCcCeEeCccCcccccCC----ccccEEEcccCcccCCCChhhhccCCccccccccc
Q 045127 52 HLCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCP----LGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYN 127 (508)
Q Consensus 52 ~l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p----~~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N 127 (508)
.|..|....|.+..+++ +..+++|+.|+|++|.+++..| ..++.|+|++|++++..| +..+++|+.|+|++|
T Consensus 244 ~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n 319 (466)
T 1o6v_A 244 NLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFN 319 (466)
T ss_dssp TCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGGGTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSS
T ss_pred CCCEEECCCCccccchh--hhcCCCCCEEECCCCccCccccccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCC
Confidence 34445555556666554 6666677777777776665332 234666666666664332 566666666666666
Q ss_pred cccCcCCchhhhcCCccceeccccccccCccccccccccccCCCCccCCCC
Q 045127 128 QLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLHSGL 178 (508)
Q Consensus 128 ~l~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~~~n~~ 178 (508)
++++..| +..+++|+.|++++|++++ . +.+..+++|+.+++.+|..
T Consensus 320 ~l~~~~~---~~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~l~~n~l 365 (466)
T 1o6v_A 320 NISDISP---VSSLTKLQRLFFYNNKVSD-V-SSLANLTNINWLSAGHNQI 365 (466)
T ss_dssp CCSCCGG---GGGCTTCCEEECCSSCCCC-C-GGGTTCTTCCEEECCSSCC
T ss_pred cCCCchh---hccCccCCEeECCCCccCC-c-hhhccCCCCCEEeCCCCcc
Confidence 6663332 4566666666666666665 2 3455566666666666543
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A | Back alignment and structure |
|---|
Probab=99.21 E-value=2.1e-11 Score=130.40 Aligned_cols=156 Identities=20% Similarity=0.214 Sum_probs=110.8
Q ss_pred ccccccCCCCCCCCCCcCCcCCCCCccccccCCCCC--CcchhcccccccccccccCCCCCcccCCCccccCCCCCcCeE
Q 045127 3 VEDLNNLHPPPDFNSTIMNNCIHNPSLKYCNSSSPM--DLNEIFKSTIVASHLCNESKNPNCVESFPKIDLRSRPKITPL 80 (508)
Q Consensus 3 ~~~l~~l~~~~~~~~~~~~~c~~~~~~~~~~~~~~~--~l~~~~~~~~~~~~l~~L~~~~n~~~~~p~~~~~~l~~L~~L 80 (508)
+..|..|+++.+....+++ ......+..++...+. +++.... ...|..|.+..|.+..++ .+..|++|+.|
T Consensus 64 l~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~Ls~N~l~~l~~l~~----l~~L~~L~Ls~N~l~~l~--~l~~l~~L~~L 136 (605)
T 1m9s_A 64 LPNVTKLFLNGNKLTDIKP-LTNLKNLGWLFLDENKIKDLSSLKD----LKKLKSLSLEHNGISDIN--GLVHLPQLESL 136 (605)
T ss_dssp CTTCCEEECTTSCCCCCGG-GGGCTTCCEEECCSSCCCCCTTSTT----CTTCCEEECTTSCCCCCG--GGGGCTTCSEE
T ss_pred CCCCCEEEeeCCCCCCChh-hccCCCCCEEECcCCCCCCChhhcc----CCCCCEEEecCCCCCCCc--cccCCCccCEE
Confidence 4567777788877777655 2122223333211111 2221111 124666777778898886 59999999999
Q ss_pred eCccCcccccCC-----ccccEEEcccCcccCCCChhhhccCCccccccccccccCcCCchhhhcCCccceecccccccc
Q 045127 81 YLSFNFFWKYCP-----LGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFS 155 (508)
Q Consensus 81 ~L~~N~l~~~~p-----~~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp~~~~~~l~~L~~l~l~~N~l~ 155 (508)
+|++|.|++. + ..|+.|+|++|+|++..| +..+++|+.|+|++|+|+ .+| .+..+++|+.|+|++|+++
T Consensus 137 ~Ls~N~l~~l-~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~-~l~--~l~~l~~L~~L~L~~N~l~ 210 (605)
T 1m9s_A 137 YLGNNKITDI-TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHIS-DLR--ALAGLKNLDVLELFSQECL 210 (605)
T ss_dssp ECCSSCCCCC-GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC-BCG--GGTTCTTCSEEECCSEEEE
T ss_pred ECCCCccCCc-hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCC-CCh--HHccCCCCCEEEccCCcCc
Confidence 9999999874 3 456999999999997666 999999999999999999 566 4899999999999999999
Q ss_pred CccccccccccccCCC
Q 045127 156 EMKVSDTKFFQRFNSS 171 (508)
Q Consensus 156 ~~~~~~~~~l~~l~~~ 171 (508)
+.+......+..+..+
T Consensus 211 ~~p~~~~~~l~~~~~l 226 (605)
T 1m9s_A 211 NKPINHQSNLVVPNTV 226 (605)
T ss_dssp CCCCCCCSSCEEECCC
T ss_pred CCcccccccEEecccc
Confidence 8544444444444333
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.21 E-value=2e-11 Score=116.93 Aligned_cols=117 Identities=19% Similarity=0.236 Sum_probs=98.3
Q ss_pred cccccCCCCCcccCCCccccCCCCCcCeEeCccCcccccCC----ccccEEEcccCcccCCCChhhhccCCccccccccc
Q 045127 52 HLCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCP----LGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYN 127 (508)
Q Consensus 52 ~l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p----~~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N 127 (508)
.+..|....|.++.+| .++.+++|+.|+|++|+|++..| ..+++|+|++|++++ +|. +.. ++|+.|+|++|
T Consensus 42 ~L~~L~l~~n~i~~l~--~l~~l~~L~~L~L~~N~i~~~~~l~~l~~L~~L~L~~N~l~~-l~~-~~~-~~L~~L~L~~N 116 (263)
T 1xeu_A 42 GVQNFNGDNSNIQSLA--GMQFFTNLKELHLSHNQISDLSPLKDLTKLEELSVNRNRLKN-LNG-IPS-ACLSRLFLDNN 116 (263)
T ss_dssp TCSEEECTTSCCCCCT--TGGGCTTCCEEECCSSCCCCCGGGTTCSSCCEEECCSSCCSC-CTT-CCC-SSCCEEECCSS
T ss_pred cCcEEECcCCCcccch--HHhhCCCCCEEECCCCccCCChhhccCCCCCEEECCCCccCC-cCc-ccc-CcccEEEccCC
Confidence 4556667778899998 59999999999999999987543 356999999999996 453 333 99999999999
Q ss_pred cccCcCCchhhhcCCccceeccccccccCccccccccccccCCCCccCCCC
Q 045127 128 QLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLHSGL 178 (508)
Q Consensus 128 ~l~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~~~n~~ 178 (508)
+++ .+| .+..+++|+.|++++|++++ . +.+..+++|+.+++.+|..
T Consensus 117 ~l~-~~~--~l~~l~~L~~L~Ls~N~i~~-~-~~l~~l~~L~~L~L~~N~i 162 (263)
T 1xeu_A 117 ELR-DTD--SLIHLKNLEILSIRNNKLKS-I-VMLGFLSKLEVLDLHGNEI 162 (263)
T ss_dssp CCS-BSG--GGTTCTTCCEEECTTSCCCB-C-GGGGGCTTCCEEECTTSCC
T ss_pred ccC-CCh--hhcCcccccEEECCCCcCCC-C-hHHccCCCCCEEECCCCcC
Confidence 999 566 48899999999999999998 4 3677899999999999975
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} | Back alignment and structure |
|---|
Probab=99.20 E-value=3.2e-11 Score=120.06 Aligned_cols=116 Identities=24% Similarity=0.253 Sum_probs=61.9
Q ss_pred ccccCCCCCcccCCCccccCCCCCcCeEeCccCcccccCC----ccccEEEcccCcccCCCChhhhccCCcccccccccc
Q 045127 53 LCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCP----LGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQ 128 (508)
Q Consensus 53 l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p----~~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~ 128 (508)
+..|....|.+..++. +..+++|+.|++++|.+++..+ ..+++|+|++|++++. |. +..+++|++|++++|+
T Consensus 179 L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~~~~~~~L~~L~l~~n~l~~~-~~-~~~l~~L~~L~l~~n~ 254 (347)
T 4fmz_A 179 LYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITPVANMTRLNSLKIGNNKITDL-SP-LANLSQLTWLEIGTNQ 254 (347)
T ss_dssp CSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGGGGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSC
T ss_pred CCEEEccCCccccccc--ccCCCccceeecccCCCCCCchhhcCCcCCEEEccCCccCCC-cc-hhcCCCCCEEECCCCc
Confidence 4444455555666554 5556666666666666554322 3345666666665533 22 5555556666666665
Q ss_pred ccCcCCchhhhcCCccceeccccccccCccccccccccccCCCCccCCC
Q 045127 129 LSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLHSG 177 (508)
Q Consensus 129 l~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~~~n~ 177 (508)
++ .++ .+..+++|+.|++++|++++ . +.+..+++|..+++.+|.
T Consensus 255 l~-~~~--~~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~L~~n~ 298 (347)
T 4fmz_A 255 IS-DIN--AVKDLTKLKMLNVGSNQISD-I-SVLNNLSQLNSLFLNNNQ 298 (347)
T ss_dssp CC-CCG--GGTTCTTCCEEECCSSCCCC-C-GGGGGCTTCSEEECCSSC
T ss_pred cC-CCh--hHhcCCCcCEEEccCCccCC-C-hhhcCCCCCCEEECcCCc
Confidence 55 333 34555555555555555555 2 334445555555555554
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.19 E-value=4.9e-11 Score=127.78 Aligned_cols=75 Identities=20% Similarity=0.301 Sum_probs=50.8
Q ss_pred cccEEEcccCcccCCCChhhhccCCccccccccccccCcCCchhhhcCCccceeccccccccCccccccccccccCCCCc
Q 045127 94 GIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSF 173 (508)
Q Consensus 94 ~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~ 173 (508)
.+++|+|++|+|++ +| ..+++|+.|+|++|+|+ .+| . .+++|+.|+|++|+|+. .++.+..+++|..+++
T Consensus 222 ~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp-~---~~~~L~~L~Ls~N~L~~-lp~~l~~l~~L~~L~L 291 (622)
T 3g06_A 222 GLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLP-M---LPSGLLSLSVYRNQLTR-LPESLIHLSSETTVNL 291 (622)
T ss_dssp TCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCC-C---CCTTCCEEECCSSCCCS-CCGGGGGSCTTCEEEC
T ss_pred CCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCC-c---ccccCcEEeCCCCCCCc-CCHHHhhccccCEEEe
Confidence 34566666666663 44 34466777777777777 677 2 45677777777777776 5666777777777777
Q ss_pred cCCCC
Q 045127 174 LHSGL 178 (508)
Q Consensus 174 ~~n~~ 178 (508)
.+|++
T Consensus 292 ~~N~l 296 (622)
T 3g06_A 292 EGNPL 296 (622)
T ss_dssp CSCCC
T ss_pred cCCCC
Confidence 77765
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A | Back alignment and structure |
|---|
Probab=99.19 E-value=5.2e-11 Score=123.74 Aligned_cols=160 Identities=24% Similarity=0.268 Sum_probs=114.7
Q ss_pred cccccCCCCCCCCCCcCCcCCCCCccccccCCCCCCcchhccccc----ccccccccCCCCCcccCCCccccCCCCCcCe
Q 045127 4 EDLNNLHPPPDFNSTIMNNCIHNPSLKYCNSSSPMDLNEIFKSTI----VASHLCNESKNPNCVESFPKIDLRSRPKITP 79 (508)
Q Consensus 4 ~~l~~l~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~l~~~~~~~~----~~~~l~~L~~~~n~~~~~p~~~~~~l~~L~~ 79 (508)
+.|..|++..+....++. +..|..+..+++.++..... ....|..|....|.++.++ .+..+++|+.
T Consensus 177 ~~L~~L~l~~n~l~~~~~-------l~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~~--~l~~l~~L~~ 247 (466)
T 1o6v_A 177 TTLERLDISSNKVSDISV-------LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG--TLASLTNLTD 247 (466)
T ss_dssp TTCCEEECCSSCCCCCGG-------GGGCTTCSEEECCSSCCCCCGGGGGCTTCCEEECCSSCCCCCG--GGGGCTTCSE
T ss_pred CCCCEEECcCCcCCCChh-------hccCCCCCEEEecCCcccccccccccCCCCEEECCCCCcccch--hhhcCCCCCE
Confidence 456677777776665532 22233333332222211111 1124566667778888885 5889999999
Q ss_pred EeCccCcccccCC----ccccEEEcccCcccCCCChhhhccCCccccccccccccCcCCchhhhcCCccceecccccccc
Q 045127 80 LYLSFNFFWKYCP----LGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFS 155 (508)
Q Consensus 80 L~L~~N~l~~~~p----~~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp~~~~~~l~~L~~l~l~~N~l~ 155 (508)
|+|++|.+++..| ..++.|+|++|++++..| +..+++|+.|+|++|+++ .+| . +..+++|+.|++++|+++
T Consensus 248 L~l~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~-~~~-~-~~~l~~L~~L~L~~n~l~ 322 (466)
T 1o6v_A 248 LDLANNQISNLAPLSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLE-DIS-P-ISNLKNLTYLTLYFNNIS 322 (466)
T ss_dssp EECCSSCCCCCGGGTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCS-CCG-G-GGGCTTCSEEECCSSCCS
T ss_pred EECCCCccccchhhhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCccc-Cch-h-hcCCCCCCEEECcCCcCC
Confidence 9999999987544 456999999999996543 889999999999999999 555 2 788999999999999999
Q ss_pred CccccccccccccCCCCccCCCCC
Q 045127 156 EMKVSDTKFFQRFNSSSFLHSGLF 179 (508)
Q Consensus 156 ~~~~~~~~~l~~l~~~~~~~n~~~ 179 (508)
+ .++ +..+++|+.+++.+|...
T Consensus 323 ~-~~~-~~~l~~L~~L~l~~n~l~ 344 (466)
T 1o6v_A 323 D-ISP-VSSLTKLQRLFFYNNKVS 344 (466)
T ss_dssp C-CGG-GGGCTTCCEEECCSSCCC
T ss_pred C-chh-hccCccCCEeECCCCccC
Confidence 8 444 677889999999888653
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.18 E-value=2.8e-11 Score=128.17 Aligned_cols=104 Identities=19% Similarity=0.173 Sum_probs=85.2
Q ss_pred cccccCCCCCcccCCCccccCCCCCcCeEeCccCcccccCC---ccccEEEcccCcccCCCChhhhccCCc-------cc
Q 045127 52 HLCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCP---LGIMSIDLSNNSLKGAFPIDVLLCTQI-------QA 121 (508)
Q Consensus 52 ~l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p---~~l~~L~Ls~N~l~~~~p~~~~~l~~L-------~~ 121 (508)
.|..|+...|.++.+|. .+++|+.|+|++|+|++ +| ..|+.|+|++|+|+ .+|. |.. +| +.
T Consensus 141 ~L~~L~Ls~N~l~~lp~----~l~~L~~L~Ls~N~L~~-lp~l~~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~ 211 (571)
T 3cvr_A 141 LLEYINADNNQLTMLPE----LPTSLEVLSVRNNQLTF-LPELPESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIF 211 (571)
T ss_dssp TCCEEECCSSCCSCCCC----CCTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCS-SCCC-CC----------CCEE
T ss_pred cccEEeCCCCccCcCCC----cCCCcCEEECCCCCCCC-cchhhCCCCEEECcCCCCC-chhh-HHH--hhhcccccceE
Confidence 56667777788999986 57899999999999987 55 46699999999999 6777 655 77 99
Q ss_pred cccccccccCcCCchhhhcCCccceeccccccccCcccccccccc
Q 045127 122 LDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQ 166 (508)
Q Consensus 122 L~l~~N~l~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~ 166 (508)
|+|++|+|+ .+| ..+..+++|+.|+|++|+|++..+..+..+.
T Consensus 212 L~Ls~N~l~-~lp-~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~ 254 (571)
T 3cvr_A 212 FRCRENRIT-HIP-ENILSLDPTCTIILEDNPLSSRIRESLSQQT 254 (571)
T ss_dssp EECCSSCCC-CCC-GGGGGSCTTEEEECCSSSCCHHHHHHHHHHH
T ss_pred EecCCCcce-ecC-HHHhcCCCCCEEEeeCCcCCCcCHHHHHHhh
Confidence 999999999 899 6677799999999999999995565555443
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A | Back alignment and structure |
|---|
Probab=99.17 E-value=8.9e-11 Score=121.50 Aligned_cols=114 Identities=23% Similarity=0.250 Sum_probs=90.2
Q ss_pred cccccCCCCCcccCCCccccCCCCCcCeEeCccCcccc--cCCccccEEEcccCcccCCCChhhhccCCccccccccccc
Q 045127 52 HLCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWK--YCPLGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQL 129 (508)
Q Consensus 52 ~l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~--~~p~~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l 129 (508)
.+..|....|.++.+| +|+++++|+.|++++|++++ ..|..+++|+|++|+++ .+| .++.+++|++|++++|++
T Consensus 174 ~L~~L~L~~n~l~~l~--~~~~l~~L~~L~l~~N~l~~l~~~~~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l 249 (454)
T 1jl5_A 174 SLEFIAAGNNQLEELP--ELQNLPFLTAIYADNNSLKKLPDLPLSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLL 249 (454)
T ss_dssp TCCEEECCSSCCSSCC--CCTTCTTCCEEECCSSCCSSCCCCCTTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCC
T ss_pred cccEEECcCCcCCcCc--cccCCCCCCEEECCCCcCCcCCCCcCcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcC
Confidence 4556666677888887 48999999999999999987 23457799999999998 677 488999999999999999
Q ss_pred cCcCCchhhhcCCccceeccccccccCccccccccccccCCCCccCCCC
Q 045127 130 SGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLHSGL 178 (508)
Q Consensus 130 ~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~~~n~~ 178 (508)
+ .+| .. +++|+.|++++|++++ .+.. +++++.+++.+|..
T Consensus 250 ~-~l~-~~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l 289 (454)
T 1jl5_A 250 K-TLP-DL---PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIF 289 (454)
T ss_dssp S-SCC-SC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCC
T ss_pred C-ccc-cc---ccccCEEECCCCcccc-cCcc---cCcCCEEECcCCcc
Confidence 9 677 32 4789999999999998 4432 36777777777754
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A | Back alignment and structure |
|---|
Probab=99.16 E-value=1.4e-12 Score=119.28 Aligned_cols=115 Identities=19% Similarity=0.186 Sum_probs=93.2
Q ss_pred CCCCcccCCCccccCCCCCcCeEeCccCcccccCC-----ccccEEEcccCcccCCCChhhhccCCccccccccccccCc
Q 045127 58 KNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCP-----LGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGD 132 (508)
Q Consensus 58 ~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p-----~~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~ 132 (508)
...+.++.+|. .|+.+++|+.|+|++|.+++ +| ..+++|+|++|+++ .+|..+..+++|++|+|++|+++ .
T Consensus 32 ~~~~~l~~l~~-~~~~l~~L~~L~ls~n~l~~-l~~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~-~ 107 (198)
T 1ds9_A 32 GMIPPIEKMDA-TLSTLKACKHLALSTNNIEK-ISSLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIA-S 107 (198)
T ss_dssp BCCTTCCCCHH-HHHHTTTCSEEECSEEEESC-CCCHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECC-C
T ss_pred cccCcHhhhhH-HHhcCCCCCEEECCCCCCcc-ccccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCC-c
Confidence 33356777777 88889999999999999987 66 33489999999998 67888888899999999999999 5
Q ss_pred CCchhhhcCCccceeccccccccCccc-cccccccccCCCCccCCCC
Q 045127 133 IPVESFSVLANLTFLNLSYNHFSEMKV-SDTKFFQRFNSSSFLHSGL 178 (508)
Q Consensus 133 lp~~~~~~l~~L~~l~l~~N~l~~~~~-~~~~~l~~l~~~~~~~n~~ 178 (508)
+| .+..+++|+.|++++|+++++.. +.+..+++|..+++.+|+.
T Consensus 108 l~--~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l 152 (198)
T 1ds9_A 108 LS--GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPL 152 (198)
T ss_dssp HH--HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHH
T ss_pred CC--ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCcc
Confidence 66 47888999999999999997332 4667788888888888854
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=99.12 E-value=6.9e-11 Score=125.54 Aligned_cols=98 Identities=20% Similarity=0.200 Sum_probs=82.6
Q ss_pred CcCeEeCccCcccccCCc-----cccEEEcccCcccCCCChhhhccCCccccccccccccCcCCchhhhcCCccceeccc
Q 045127 76 KITPLYLSFNFFWKYCPL-----GIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLS 150 (508)
Q Consensus 76 ~L~~L~L~~N~l~~~~p~-----~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp~~~~~~l~~L~~l~l~ 150 (508)
.|+.|+|++|+|++ +|. .|+.|+|++|+|+ .+|..|+++++|+.|+|++|+|+ .+| .++.+++|+.|+|+
T Consensus 442 ~L~~L~Ls~n~l~~-lp~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp--~l~~l~~L~~L~Ls 516 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCHLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALE-NVD--GVANLPRLQELLLC 516 (567)
T ss_dssp TCSEEECTTSCCSS-CCCGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCG--GGTTCSSCCEEECC
T ss_pred CceEEEecCCCCCC-CcCccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCC-CCc--ccCCCCCCcEEECC
Confidence 47789999999887 563 3488999999998 78889999999999999999999 577 68889999999999
Q ss_pred cccccCcc-ccccccccccCCCCccCCCC
Q 045127 151 YNHFSEMK-VSDTKFFQRFNSSSFLHSGL 178 (508)
Q Consensus 151 ~N~l~~~~-~~~~~~l~~l~~~~~~~n~~ 178 (508)
+|+|+++. +..+..+++|..+++.+|+.
T Consensus 517 ~N~l~~~~~p~~l~~l~~L~~L~L~~N~l 545 (567)
T 1dce_A 517 NNRLQQSAAIQPLVSCPRLVLLNLQGNSL 545 (567)
T ss_dssp SSCCCSSSTTGGGGGCTTCCEEECTTSGG
T ss_pred CCCCCCCCCcHHHhcCCCCCEEEecCCcC
Confidence 99999854 77788888999999988875
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.12 E-value=1.7e-10 Score=119.51 Aligned_cols=156 Identities=16% Similarity=0.125 Sum_probs=91.5
Q ss_pred ccccccCCCCCCCCCCcCCcCCCCCccccccCCCCCCcchhcccc--c-ccccccccCCCCCcccCCCccccCCCCCcCe
Q 045127 3 VEDLNNLHPPPDFNSTIMNNCIHNPSLKYCNSSSPMDLNEIFKST--I-VASHLCNESKNPNCVESFPKIDLRSRPKITP 79 (508)
Q Consensus 3 ~~~l~~l~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~l~~~~~~~--~-~~~~l~~L~~~~n~~~~~p~~~~~~l~~L~~ 79 (508)
++.|..|+++.+....+|. +..|..+..+++..+.... . .-..|..|....|.++.+| ++++++|++
T Consensus 41 l~~L~~L~Ls~n~l~~~~~-------l~~l~~L~~L~Ls~n~l~~~~~~~l~~L~~L~Ls~N~l~~~~---~~~l~~L~~ 110 (457)
T 3bz5_A 41 LATLTSLDCHNSSITDMTG-------IEKLTGLTKLICTSNNITTLDLSQNTNLTYLACDSNKLTNLD---VTPLTKLTY 110 (457)
T ss_dssp HTTCCEEECCSSCCCCCTT-------GGGCTTCSEEECCSSCCSCCCCTTCTTCSEEECCSSCCSCCC---CTTCTTCCE
T ss_pred cCCCCEEEccCCCcccChh-------hcccCCCCEEEccCCcCCeEccccCCCCCEEECcCCCCceee---cCCCCcCCE
Confidence 3456667777776666542 2223333222222211100 0 0113455555566677763 777888888
Q ss_pred EeCccCcccccCC----ccccEEEcccCcccCCCChhhhccCCccccccccccccCcCCchhhhcCCccceecccccccc
Q 045127 80 LYLSFNFFWKYCP----LGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFS 155 (508)
Q Consensus 80 L~L~~N~l~~~~p----~~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp~~~~~~l~~L~~l~l~~N~l~ 155 (508)
|+|++|++++ +| ..+++|+|++|++++. + ++.+++|++|++++|+..+.++ ++.+++|+.|++++|+++
T Consensus 111 L~L~~N~l~~-l~~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~~---~~~l~~L~~L~ls~n~l~ 183 (457)
T 3bz5_A 111 LNCDTNKLTK-LDVSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKLD---VTPQTQLTTLDCSFNKIT 183 (457)
T ss_dssp EECCSSCCSC-CCCTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCCC---CTTCTTCCEEECCSSCCC
T ss_pred EECCCCcCCe-ecCCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCcccccc---cccCCcCCEEECCCCccc
Confidence 8888888776 34 3457888888888763 3 6667777777777775554554 556677777777777777
Q ss_pred CccccccccccccCCCCccCCCC
Q 045127 156 EMKVSDTKFFQRFNSSSFLHSGL 178 (508)
Q Consensus 156 ~~~~~~~~~l~~l~~~~~~~n~~ 178 (508)
++ + +..++++..+++.+|..
T Consensus 184 ~l-~--l~~l~~L~~L~l~~N~l 203 (457)
T 3bz5_A 184 EL-D--VSQNKLLNRLNCDTNNI 203 (457)
T ss_dssp CC-C--CTTCTTCCEEECCSSCC
T ss_pred ee-c--cccCCCCCEEECcCCcC
Confidence 63 2 44556666666665543
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 | Back alignment and structure |
|---|
Probab=99.12 E-value=5.2e-11 Score=118.64 Aligned_cols=101 Identities=15% Similarity=0.127 Sum_probs=83.5
Q ss_pred eEeCccC-cccccCCc-----cccEEEccc-CcccCCCChhhhccCCccccccccccccCcCCchhhhcCCccceecccc
Q 045127 79 PLYLSFN-FFWKYCPL-----GIMSIDLSN-NSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSY 151 (508)
Q Consensus 79 ~L~L~~N-~l~~~~p~-----~l~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp~~~~~~l~~L~~l~l~~ 151 (508)
.+++++| +|++ +|. .|+.|+|++ |+|++..|..|.+|++|+.|+|++|+|++..| ..|.+|++|+.|+|++
T Consensus 12 ~v~~~~~n~l~~-ip~l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALDS-LHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAP-DAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCTT-TTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECT-TGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCCc-cCCCCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCH-HHhcCCcCCCEEeCCC
Confidence 5688888 7876 553 359999996 99998888999999999999999999995555 8999999999999999
Q ss_pred ccccCccccccccccccCCCCccCCCCC-CCC
Q 045127 152 NHFSEMKVSDTKFFQRFNSSSFLHSGLF-PGH 182 (508)
Q Consensus 152 N~l~~~~~~~~~~l~~l~~~~~~~n~~~-~c~ 182 (508)
|+|+++++..+..+. |..+++.+|++. .|.
T Consensus 90 N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~c~ 120 (347)
T 2ifg_A 90 NALESLSWKTVQGLS-LQELVLSGNPLHCSCA 120 (347)
T ss_dssp SCCSCCCSTTTCSCC-CCEEECCSSCCCCCGG
T ss_pred CccceeCHHHcccCC-ceEEEeeCCCccCCCc
Confidence 999995444444444 899999999874 453
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.11 E-value=2.6e-10 Score=118.09 Aligned_cols=72 Identities=18% Similarity=0.201 Sum_probs=34.9
Q ss_pred cEEEcccCcccCCCChhhhccCCccccccccccccCcCCchhhhcCCccceeccccccccCccccccccccccCCCCccC
Q 045127 96 MSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLH 175 (508)
Q Consensus 96 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~~~ 175 (508)
++|+|++|++++ +| ++.+++|+.|++++|+++ .++ ++.+++|+.|++++|+|++ .+ +..+++|..+++.+
T Consensus 173 ~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~-~~~---l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~ 242 (457)
T 3bz5_A 173 TTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNIT-KLD---LNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSV 242 (457)
T ss_dssp CEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCS-CCC---CTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCS
T ss_pred CEEECCCCccce-ec--cccCCCCCEEECcCCcCC-eec---cccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeC
Confidence 445555555543 23 444455555555555554 222 4445555555555555555 22 34445555555555
Q ss_pred CC
Q 045127 176 SG 177 (508)
Q Consensus 176 n~ 177 (508)
|.
T Consensus 243 N~ 244 (457)
T 3bz5_A 243 NP 244 (457)
T ss_dssp SC
T ss_pred Cc
Confidence 54
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.09 E-value=1.9e-10 Score=123.28 Aligned_cols=31 Identities=23% Similarity=0.070 Sum_probs=14.5
Q ss_pred ccCCCCCcccCCCccccCCCCCcCeEeCccCcccc
Q 045127 55 NESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWK 89 (508)
Q Consensus 55 ~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~ 89 (508)
.|....|.++.+|. . +++|++|+|++|+|++
T Consensus 125 ~L~L~~N~l~~lp~-~---l~~L~~L~Ls~N~l~~ 155 (622)
T 3g06_A 125 KLWIFGNQLTSLPV-L---PPGLQELSVSDNQLAS 155 (622)
T ss_dssp EEECCSSCCSCCCC-C---CTTCCEEECCSSCCSC
T ss_pred EEECCCCCCCcCCC-C---CCCCCEEECcCCcCCC
Confidence 33333444444443 1 2455555555555543
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A | Back alignment and structure |
|---|
Probab=99.02 E-value=7.9e-12 Score=126.60 Aligned_cols=102 Identities=15% Similarity=0.169 Sum_probs=54.1
Q ss_pred CCcCeEeCccCccc-ccCC---------ccccEEEcccCccc--C---CCChhhhccCCcccccccccccc----CcCCc
Q 045127 75 PKITPLYLSFNFFW-KYCP---------LGIMSIDLSNNSLK--G---AFPIDVLLCTQIQALDLSYNQLS----GDIPV 135 (508)
Q Consensus 75 ~~L~~L~L~~N~l~-~~~p---------~~l~~L~Ls~N~l~--~---~~p~~~~~l~~L~~L~l~~N~l~----g~lp~ 135 (508)
++|++|+|++|+++ +.+| +.+++|+|++|+++ | ..|..+..+++|++|+|++|+++ +.+|
T Consensus 159 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~- 237 (386)
T 2ca6_A 159 PPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALA- 237 (386)
T ss_dssp CCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHH-
T ss_pred CCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHH-
Confidence 56666666666665 2222 23466666666655 2 23335556666666666666663 3455
Q ss_pred hhhhcCCccceeccccccccCc----ccccc--ccccccCCCCccCCC
Q 045127 136 ESFSVLANLTFLNLSYNHFSEM----KVSDT--KFFQRFNSSSFLHSG 177 (508)
Q Consensus 136 ~~~~~l~~L~~l~l~~N~l~~~----~~~~~--~~l~~l~~~~~~~n~ 177 (508)
..+..+++|+.|+|++|++++. .+..+ ..+++|..+++.+|.
T Consensus 238 ~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~ 285 (386)
T 2ca6_A 238 IALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNE 285 (386)
T ss_dssp HHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSC
T ss_pred HHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCc
Confidence 4555566666666666666552 11222 124555555555554
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A | Back alignment and structure |
|---|
Probab=99.01 E-value=6.8e-12 Score=114.74 Aligned_cols=117 Identities=15% Similarity=0.149 Sum_probs=95.1
Q ss_pred cccccCCCCCcccCCCccccCCCCCcCeEeCccCcccccCC------ccccEEEcccCcccCCCChhhhccCCccccccc
Q 045127 52 HLCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCP------LGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLS 125 (508)
Q Consensus 52 ~l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p------~~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 125 (508)
.+..|+...|.+..+| .+..+++|+.|+|++|.|+. +| +.+++|+|++|++++ +| .+..+++|++|+|+
T Consensus 49 ~L~~L~ls~n~l~~l~--~~~~l~~L~~L~l~~n~l~~-l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~ 123 (198)
T 1ds9_A 49 ACKHLALSTNNIEKIS--SLSGMENLRILSLGRNLIKK-IENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMS 123 (198)
T ss_dssp TCSEEECSEEEESCCC--CHHHHTTCCEEEEEEEEECS-CSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEES
T ss_pred CCCEEECCCCCCcccc--ccccCCCCCEEECCCCCccc-ccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECC
Confidence 4555666678898998 69999999999999999985 66 345999999999996 55 79999999999999
Q ss_pred cccccCcCCc-hhhhcCCccceeccccccccCccccc-----------cccccccCCCCccCCC
Q 045127 126 YNQLSGDIPV-ESFSVLANLTFLNLSYNHFSEMKVSD-----------TKFFQRFNSSSFLHSG 177 (508)
Q Consensus 126 ~N~l~g~lp~-~~~~~l~~L~~l~l~~N~l~~~~~~~-----------~~~l~~l~~~~~~~n~ 177 (508)
+|+++ .+|. ..+..+++|+.|++++|++++ .+|. +..+++|+.++ +|+
T Consensus 124 ~N~i~-~~~~~~~l~~l~~L~~L~l~~N~l~~-~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~ 183 (198)
T 1ds9_A 124 NNKIT-NWGEIDKLAALDKLEDLLLAGNPLYN-DYKENNATSEYRIEVVKRLPNLKKLD--GMP 183 (198)
T ss_dssp EEECC-CHHHHHHHTTTTTCSEEEECSCHHHH-HHHTTTTHHHHHHHHHHHCSSCSEEC--CGG
T ss_pred CCcCC-chhHHHHHhcCCCCCEEEecCCcccc-ccccccchHHHHHHHHHhCCCcEEEC--Ccc
Confidence 99999 6662 478899999999999999998 4443 45566666554 544
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=98.99 E-value=4.5e-11 Score=119.97 Aligned_cols=126 Identities=21% Similarity=0.140 Sum_probs=64.0
Q ss_pred cccccCCCCCcccCCCccc----cCCC-CCcCeEeCccCcccccC-----------CccccEEEcccCcccCCCChh---
Q 045127 52 HLCNESKNPNCVESFPKID----LRSR-PKITPLYLSFNFFWKYC-----------PLGIMSIDLSNNSLKGAFPID--- 112 (508)
Q Consensus 52 ~l~~L~~~~n~~~~~p~~~----~~~l-~~L~~L~L~~N~l~~~~-----------p~~l~~L~Ls~N~l~~~~p~~--- 112 (508)
.|..|+...|.++..+... +..+ ++|+.|+|++|+|++.. |..+++|+|++|++++..+..
T Consensus 81 ~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~ 160 (362)
T 3goz_A 81 NVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQ 160 (362)
T ss_dssp TCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHH
T ss_pred CccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHH
Confidence 3444555555555554422 3333 56666666666665432 235566666666666433322
Q ss_pred -hhccC-CccccccccccccCcCCchhhhc----C-CccceeccccccccCccc----ccccc-ccccCCCCccCCCC
Q 045127 113 -VLLCT-QIQALDLSYNQLSGDIPVESFSV----L-ANLTFLNLSYNHFSEMKV----SDTKF-FQRFNSSSFLHSGL 178 (508)
Q Consensus 113 -~~~l~-~L~~L~l~~N~l~g~lp~~~~~~----l-~~L~~l~l~~N~l~~~~~----~~~~~-l~~l~~~~~~~n~~ 178 (508)
+..++ +|++|+|++|++++..+ ..++. + ++|+.|+|++|++++... ..+.. .++|+.+++.+|..
T Consensus 161 ~l~~~~~~L~~L~Ls~n~l~~~~~-~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l 237 (362)
T 3goz_A 161 ILAAIPANVNSLNLRGNNLASKNC-AELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCL 237 (362)
T ss_dssp HHHTSCTTCCEEECTTSCGGGSCH-HHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCC
T ss_pred HHhcCCccccEeeecCCCCchhhH-HHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCC
Confidence 23333 66666666666663333 33332 2 466666666666665211 11222 23566666666643
|
| >2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A | Back alignment and structure |
|---|
Probab=98.99 E-value=5.5e-11 Score=117.74 Aligned_cols=124 Identities=19% Similarity=0.129 Sum_probs=84.9
Q ss_pred cccccCCCCCccc-CCCccccCCCCCcCeEeCccC-ccccc-CC------ccccEEEcccC-cccCC-CChhhhccC-Cc
Q 045127 52 HLCNESKNPNCVE-SFPKIDLRSRPKITPLYLSFN-FFWKY-CP------LGIMSIDLSNN-SLKGA-FPIDVLLCT-QI 119 (508)
Q Consensus 52 ~l~~L~~~~n~~~-~~p~~~~~~l~~L~~L~L~~N-~l~~~-~p------~~l~~L~Ls~N-~l~~~-~p~~~~~l~-~L 119 (508)
.|..|+...|.++ .++. .++.+++|++|+|++| .+++. +| +.+++|+|++| .+++. ++..+..++ +|
T Consensus 119 ~L~~L~L~~~~l~~~~~~-~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L 197 (336)
T 2ast_B 119 KLQNLSLEGLRLSDPIVN-TLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETI 197 (336)
T ss_dssp CCSEEECTTCBCCHHHHH-HHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTC
T ss_pred CCCEEeCcCcccCHHHHH-HHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCC
Confidence 4445555555555 3444 6777888888888888 56642 22 34688888888 77753 566677788 88
Q ss_pred cccccccc--ccc-CcCCchhhhcCCccceecccccc-ccCccccccccccccCCCCccCCC
Q 045127 120 QALDLSYN--QLS-GDIPVESFSVLANLTFLNLSYNH-FSEMKVSDTKFFQRFNSSSFLHSG 177 (508)
Q Consensus 120 ~~L~l~~N--~l~-g~lp~~~~~~l~~L~~l~l~~N~-l~~~~~~~~~~l~~l~~~~~~~n~ 177 (508)
++|+|++| .++ +.+| ..+..+++|+.|++++|. +++..++.+..+++|+.+++.+|.
T Consensus 198 ~~L~l~~~~~~~~~~~l~-~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~ 258 (336)
T 2ast_B 198 TQLNLSGYRKNLQKSDLS-TLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCY 258 (336)
T ss_dssp CEEECCSCGGGSCHHHHH-HHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCT
T ss_pred CEEEeCCCcccCCHHHHH-HHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCC
Confidence 88888888 454 3566 667778888888888887 665456666777788888877774
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A | Back alignment and structure |
|---|
Probab=98.95 E-value=4.5e-11 Score=120.96 Aligned_cols=107 Identities=17% Similarity=0.142 Sum_probs=54.8
Q ss_pred ccCCCCCcCeEeCccCccccc----CC---------------ccccEEEcccCccc-CCCC---hhhhccCCcccccccc
Q 045127 70 DLRSRPKITPLYLSFNFFWKY----CP---------------LGIMSIDLSNNSLK-GAFP---IDVLLCTQIQALDLSY 126 (508)
Q Consensus 70 ~~~~l~~L~~L~L~~N~l~~~----~p---------------~~l~~L~Ls~N~l~-~~~p---~~~~~l~~L~~L~l~~ 126 (508)
.+..+++|++|+|++|.|+.. ++ +.+++|+|++|+++ +.+| ..+..+++|++|+|++
T Consensus 117 ~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~ 196 (386)
T 2ca6_A 117 FLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQ 196 (386)
T ss_dssp HHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCS
T ss_pred HHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcC
Confidence 455555666666666655421 11 24556666666654 2333 3444555666666666
Q ss_pred ccccC-----cCCchhhhcCCccceecccccccc----CccccccccccccCCCCccCCC
Q 045127 127 NQLSG-----DIPVESFSVLANLTFLNLSYNHFS----EMKVSDTKFFQRFNSSSFLHSG 177 (508)
Q Consensus 127 N~l~g-----~lp~~~~~~l~~L~~l~l~~N~l~----~~~~~~~~~l~~l~~~~~~~n~ 177 (508)
|+++. .+| ..+..+++|+.|+|++|+++ +..+..+..+++|..+++.+|.
T Consensus 197 n~l~~~g~~~l~~-~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~ 255 (386)
T 2ca6_A 197 NGIRPEGIEHLLL-EGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCL 255 (386)
T ss_dssp SCCCHHHHHHHHH-TTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCC
T ss_pred CCCCHhHHHHHHH-HHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCC
Confidence 65551 122 24555566666666666653 2133344445555555555554
|
| >3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A | Back alignment and structure |
|---|
Probab=98.94 E-value=2e-09 Score=105.12 Aligned_cols=133 Identities=11% Similarity=0.018 Sum_probs=98.8
Q ss_pred CceeeecCCeEEEEEEECCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcC-CCC--ccceeeEEecCC---eeEEEEee
Q 045127 243 KNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQ-HKN--LIRVLGWNNSRR---TRAIVTEW 316 (508)
Q Consensus 243 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~n--iv~~~~~~~~~~---~~~lv~e~ 316 (508)
.+.++.|....||+.. ..+++|+.... .....+.+|.++++.+. +.. +.+++....... ..|+|||+
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~---~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~ 97 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS---RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTK 97 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH---HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEEC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc---chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcc
Confidence 4679999999999863 56889987432 34677899999998883 333 445555443333 34889999
Q ss_pred cCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhC-------------------------------------------
Q 045127 317 TNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQ------------------------------------------- 353 (508)
Q Consensus 317 ~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~------------------------------------------- 353 (508)
++|.++.+... ..++..++..++.++++.++.||+.
T Consensus 98 i~G~~l~~~~~-~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 176 (304)
T 3sg8_A 98 IKGVPLTPLLL-NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDDF 176 (304)
T ss_dssp CCCEECCHHHH-HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHH
T ss_pred cCCeECCcccc-ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHHH
Confidence 99988865332 3567788888999999999999961
Q ss_pred --------------CCccccCCCCCCEEecC--CCceEEeeccCCC
Q 045127 354 --------------WPEVDYDLRTGSVLLTD--NLEPLISRFKIEY 383 (508)
Q Consensus 354 --------------~~iiH~Dlkp~NIll~~--~~~~kl~Dfg~~~ 383 (508)
..++|+|++|.||++++ ...+.++||+.+.
T Consensus 177 ~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~ 222 (304)
T 3sg8_A 177 YRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAA 222 (304)
T ss_dssp HHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCE
T ss_pred HHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCc
Confidence 04699999999999998 5667899997654
|
| >2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A | Back alignment and structure |
|---|
Probab=98.88 E-value=2.2e-10 Score=113.32 Aligned_cols=124 Identities=14% Similarity=0.041 Sum_probs=97.2
Q ss_pred cccccCCCCCcccCCCccccCCCCCcCeEeCccCccccc-CC------ccccEEEcccCcccCCCChhhhccCCcccccc
Q 045127 52 HLCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKY-CP------LGIMSIDLSNNSLKGAFPIDVLLCTQIQALDL 124 (508)
Q Consensus 52 ~l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~-~p------~~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 124 (508)
.+..|....|.++..+. .+..+++|+.|+|++|.+++. +| +.+++|+|++|++++..|..++.+++|++|+|
T Consensus 71 ~l~~L~l~~n~l~~~~~-~~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L 149 (336)
T 2ast_B 71 GVIAFRCPRSFMDQPLA-EHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNL 149 (336)
T ss_dssp TCSEEECTTCEECSCCC-SCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEEC
T ss_pred cceEEEcCCccccccch-hhccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEEC
Confidence 44555566677777776 677889999999999988754 43 35689999999998888888888999999999
Q ss_pred ccc-cccCc-CCchhhhcCCccceeccccc-cccCc-ccccccccc-ccCCCCccCCC
Q 045127 125 SYN-QLSGD-IPVESFSVLANLTFLNLSYN-HFSEM-KVSDTKFFQ-RFNSSSFLHSG 177 (508)
Q Consensus 125 ~~N-~l~g~-lp~~~~~~l~~L~~l~l~~N-~l~~~-~~~~~~~l~-~l~~~~~~~n~ 177 (508)
++| .+++. +| ..+..+++|+.|++++| ++++. .+..+..++ +|+.+++.+|.
T Consensus 150 ~~~~~l~~~~l~-~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~ 206 (336)
T 2ast_B 150 SGCSGFSEFALQ-TLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYR 206 (336)
T ss_dssp TTCBSCCHHHHH-HHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCG
T ss_pred CCCCCCCHHHHH-HHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCc
Confidence 999 67753 66 67888999999999999 88863 244456677 88888888874
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=98.88 E-value=6e-10 Score=111.72 Aligned_cols=103 Identities=25% Similarity=0.232 Sum_probs=52.2
Q ss_pred ccccCCCCCcccCCCc----cccCCCC-CcCeEeCccCcccccCC-----------ccccEEEcccCcccCCCChhhhcc
Q 045127 53 LCNESKNPNCVESFPK----IDLRSRP-KITPLYLSFNFFWKYCP-----------LGIMSIDLSNNSLKGAFPIDVLLC 116 (508)
Q Consensus 53 l~~L~~~~n~~~~~p~----~~~~~l~-~L~~L~L~~N~l~~~~p-----------~~l~~L~Ls~N~l~~~~p~~~~~l 116 (508)
+..|+...|.++.++. ..|..++ +|+.|+|++|.|++..+ ..+++|+|++|++++..+..+...
T Consensus 24 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~ 103 (362)
T 3goz_A 24 VTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVKT 103 (362)
T ss_dssp CCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHH
T ss_pred ceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHHH
Confidence 3344444455555553 3455555 56666666666554322 345566666666655544433332
Q ss_pred -----CCccccccccccccCcCCchhhhc-----CCccceeccccccccC
Q 045127 117 -----TQIQALDLSYNQLSGDIPVESFSV-----LANLTFLNLSYNHFSE 156 (508)
Q Consensus 117 -----~~L~~L~l~~N~l~g~lp~~~~~~-----l~~L~~l~l~~N~l~~ 156 (508)
++|++|+|++|+++ ..+...+.. .++|+.|++++|++++
T Consensus 104 l~~~~~~L~~L~Ls~N~l~-~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~ 152 (362)
T 3goz_A 104 LAAIPFTITVLDLGWNDFS-SKSSSEFKQAFSNLPASITSLNLRGNDLGI 152 (362)
T ss_dssp HHTSCTTCCEEECCSSCGG-GSCHHHHHHHHTTSCTTCCEEECTTSCGGG
T ss_pred HHhCCCCccEEECcCCcCC-cHHHHHHHHHHHhCCCceeEEEccCCcCCH
Confidence 55666666666665 233233322 1356666666665553
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I | Back alignment and structure |
|---|
Probab=98.77 E-value=2.3e-10 Score=118.37 Aligned_cols=125 Identities=15% Similarity=0.042 Sum_probs=85.5
Q ss_pred cccccCCCCCcccC-----CCccccCCCCCcCeEeCccCcccccC-----------CccccEEEcccCcccCC----CCh
Q 045127 52 HLCNESKNPNCVES-----FPKIDLRSRPKITPLYLSFNFFWKYC-----------PLGIMSIDLSNNSLKGA----FPI 111 (508)
Q Consensus 52 ~l~~L~~~~n~~~~-----~p~~~~~~l~~L~~L~L~~N~l~~~~-----------p~~l~~L~Ls~N~l~~~----~p~ 111 (508)
.+..|....|.++. ++. .+..+++|+.|+|++|.+++.. +..+++|+|++|.+++. +|.
T Consensus 257 ~L~~L~L~~n~l~~~~~~~l~~-~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~ 335 (461)
T 1z7x_W 257 RLRTLWIWECGITAKGCGDLCR-VLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSS 335 (461)
T ss_dssp CCCEEECTTSCCCHHHHHHHHH-HHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHH
T ss_pred CceEEECcCCCCCHHHHHHHHH-HHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHH
Confidence 44555555566665 555 5667788888888888875321 13678888888888755 456
Q ss_pred hhhccCCccccccccccccCcCCchhhhc-----CCccceeccccccccC----ccccccccccccCCCCccCCCC
Q 045127 112 DVLLCTQIQALDLSYNQLSGDIPVESFSV-----LANLTFLNLSYNHFSE----MKVSDTKFFQRFNSSSFLHSGL 178 (508)
Q Consensus 112 ~~~~l~~L~~L~l~~N~l~g~lp~~~~~~-----l~~L~~l~l~~N~l~~----~~~~~~~~l~~l~~~~~~~n~~ 178 (508)
.+..+++|++|+|++|++++..+ ..+.. .++|+.|++++|++++ ..+..+..+++|+.+++.+|+.
T Consensus 336 ~l~~~~~L~~L~Ls~n~i~~~~~-~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i 410 (461)
T 1z7x_W 336 VLAQNRFLLELQISNNRLEDAGV-RELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCL 410 (461)
T ss_dssp HHHHCSSCCEEECCSSBCHHHHH-HHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSC
T ss_pred HHhhCCCccEEEccCCccccccH-HHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCC
Confidence 66777888888888888874433 33432 5688888888888874 2455556677888888888754
|
| >3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A* | Back alignment and structure |
|---|
Probab=98.67 E-value=2.1e-07 Score=90.78 Aligned_cols=143 Identities=13% Similarity=-0.055 Sum_probs=104.9
Q ss_pred CceeeecCCeEEEEEEECCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCC---CccceeeEEe-cCCeeEEEEeecC
Q 045127 243 KNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHK---NLIRVLGWNN-SRRTRAIVTEWTN 318 (508)
Q Consensus 243 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~-~~~~~~lv~e~~~ 318 (508)
.+.++.|....||+. |..+++|+.. .......+.+|.++++.+.+. .+.+++.+.. ..+..++||||++
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~---~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~ 96 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPK---SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQ 96 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEES---SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCC
T ss_pred eeecCCCcceeEEEE----CCEEEEEecC---CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccC
Confidence 467888999999988 5678888853 233467889999999999642 3567777764 3455789999999
Q ss_pred CCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCC--------------------------------------------
Q 045127 319 GGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQW-------------------------------------------- 354 (508)
Q Consensus 319 ~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~-------------------------------------------- 354 (508)
|.++.+.. -..++..+...++.++++.|+.||+..
T Consensus 97 G~~l~~~~-~~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~ 175 (306)
T 3tdw_A 97 GQILGEDG-MAVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTLR 175 (306)
T ss_dssp SEECHHHH-HTTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHHH
T ss_pred CeECchhh-hhhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHHH
Confidence 98887632 123455666666666666666666531
Q ss_pred ---------------CccccCCCCCCEEecC---CCc-eEEeeccCCCCCCCcchhhH
Q 045127 355 ---------------PEVDYDLRTGSVLLTD---NLE-PLISRFKIEYQHRSTKYVYK 393 (508)
Q Consensus 355 ---------------~iiH~Dlkp~NIll~~---~~~-~kl~Dfg~~~~~~~~~Dv~S 393 (508)
.++|+|++|.||+++. ++. +.|+||+.+....+..|+-.
T Consensus 176 ~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~gd~~~Dla~ 233 (306)
T 3tdw_A 176 FQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAISDPDYDYVY 233 (306)
T ss_dssp HHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEECGGGGGHH
T ss_pred HHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCCCHHHHHHH
Confidence 3489999999999997 455 48999999888888888754
|
| >3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.63 E-value=2.6e-08 Score=98.25 Aligned_cols=80 Identities=15% Similarity=0.119 Sum_probs=44.8
Q ss_pred cccEEEcccCcccCCCChhhhccCCccccccccccccCcCCchhhhcCCccc-eeccccccccCccccccccccccCCCC
Q 045127 94 GIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLT-FLNLSYNHFSEMKVSDTKFFQRFNSSS 172 (508)
Q Consensus 94 ~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp~~~~~~l~~L~-~l~l~~N~l~~~~~~~~~~l~~l~~~~ 172 (508)
.++.|+|++|+++.+.+.+|.+|.+|+.|+|++| ++ .|+..+|.++++|+ .+++++ .++.+...+|..+.+|+.+.
T Consensus 227 ~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~-~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~ 303 (329)
T 3sb4_A 227 NLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LK-TIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVL 303 (329)
T ss_dssp TCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEE
T ss_pred CCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cc-eehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEE
Confidence 4456666666565554555666666666666655 55 55555566666665 666655 45554445555555555555
Q ss_pred ccCC
Q 045127 173 FLHS 176 (508)
Q Consensus 173 ~~~n 176 (508)
+.+|
T Consensus 304 l~~n 307 (329)
T 3sb4_A 304 ATGD 307 (329)
T ss_dssp ECSS
T ss_pred eCCC
Confidence 5444
|
| >3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.58 E-value=5e-08 Score=96.23 Aligned_cols=58 Identities=17% Similarity=0.175 Sum_probs=48.1
Q ss_pred cCCccccccccccccCcCCchhhhcCCccceeccccccccCccccccccccccC-CCCccC
Q 045127 116 CTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFN-SSSFLH 175 (508)
Q Consensus 116 l~~L~~L~l~~N~l~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~-~~~~~~ 175 (508)
+++|+.|+|++|+++ .||...|.++++|+.|++++| ++.+...+|..+.+|+ .+.+.+
T Consensus 225 ~~~L~~l~L~~n~i~-~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~ 283 (329)
T 3sb4_A 225 MPNLVSLDISKTNAT-TIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA 283 (329)
T ss_dssp CTTCCEEECTTBCCC-EECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT
T ss_pred cCCCeEEECCCCCcc-eecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc
Confidence 788999999999998 888888999999999999988 8876667777777777 666654
|
| >4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A* | Back alignment and structure |
|---|
Probab=98.58 E-value=4.1e-07 Score=86.81 Aligned_cols=141 Identities=9% Similarity=-0.011 Sum_probs=105.2
Q ss_pred ceeeecCCe-EEEEEEEC-CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcC-CCCccceeeEEecCCeeEEEEeecCCC
Q 045127 244 NLVGKNEGA-AIYKGILR-DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQ-HKNLIRVLGWNNSRRTRAIVTEWTNGG 320 (508)
Q Consensus 244 ~~lg~G~~g-~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~g 320 (508)
+.+..|..| .||+.... ++..+++|+-... ....+.+|...|+.+. +--+.++++++.+.+..++|||+++|.
T Consensus 30 ~~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~----~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~ 105 (272)
T 4gkh_A 30 ARDNVGQSGATIYRLYGKPNAPELFLKHGKGS----VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGK 105 (272)
T ss_dssp EEEECSSSSCEEEEEECCTTCCCEEEEEEETH----HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSE
T ss_pred EEccCCCcCCeEEEEEecCCCeEEEEEECCCC----CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCc
Confidence 345556655 68988764 5678999987432 3456888999998884 444778899998888999999999998
Q ss_pred CHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCC----------------------------------------------
Q 045127 321 NVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQW---------------------------------------------- 354 (508)
Q Consensus 321 sL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~---------------------------------------------- 354 (508)
++.+.... .......++.++++.|+.||+..
T Consensus 106 ~~~~~~~~---~~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (272)
T 4gkh_A 106 TAFQVLEE---YPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKE 182 (272)
T ss_dssp EHHHHHHH---CGGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHH
T ss_pred cccccccC---CHHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHH
Confidence 88766532 11233456666777777777531
Q ss_pred -----------CccccCCCCCCEEecCCCceEEeeccCCCCCCCcchh
Q 045127 355 -----------PEVDYDLRTGSVLLTDNLEPLISRFKIEYQHRSTKYV 391 (508)
Q Consensus 355 -----------~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~Dv 391 (508)
.++|+|+.|.||++++++.+-|+||+.+....+..|+
T Consensus 183 l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~gdp~~Dl 230 (272)
T 4gkh_A 183 MHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGIADRYQDL 230 (272)
T ss_dssp HHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEEEETHHHH
T ss_pred HHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccccCCHHHHH
Confidence 1689999999999998877789999999888888886
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I | Back alignment and structure |
|---|
Probab=98.52 E-value=8.6e-09 Score=106.44 Aligned_cols=123 Identities=15% Similarity=0.098 Sum_probs=86.9
Q ss_pred ccccCCCCCccc-----CCCccccCCCCCcCeEeCccCcccccCC-----------ccccEEEcccCcccCCC----Chh
Q 045127 53 LCNESKNPNCVE-----SFPKIDLRSRPKITPLYLSFNFFWKYCP-----------LGIMSIDLSNNSLKGAF----PID 112 (508)
Q Consensus 53 l~~L~~~~n~~~-----~~p~~~~~~l~~L~~L~L~~N~l~~~~p-----------~~l~~L~Ls~N~l~~~~----p~~ 112 (508)
+..|+...|.++ .++. .+..+++|++|+|++|.+++..+ ..+++|+|++|++++.. +..
T Consensus 87 L~~L~L~~n~i~~~~~~~l~~-~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 165 (461)
T 1z7x_W 87 IQKLSLQNCCLTGAGCGVLSS-TLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASV 165 (461)
T ss_dssp CCEEECTTSCCBGGGHHHHHH-HTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHH
T ss_pred eeEEEccCCCCCHHHHHHHHH-HHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHH
Confidence 555666666666 3455 78888899999999998864211 24788999999888643 566
Q ss_pred hhccCCccccccccccccCcCCchhhh-----cCCccceeccccccccCcc----ccccccccccCCCCccCCC
Q 045127 113 VLLCTQIQALDLSYNQLSGDIPVESFS-----VLANLTFLNLSYNHFSEMK----VSDTKFFQRFNSSSFLHSG 177 (508)
Q Consensus 113 ~~~l~~L~~L~l~~N~l~g~lp~~~~~-----~l~~L~~l~l~~N~l~~~~----~~~~~~l~~l~~~~~~~n~ 177 (508)
+..+++|++|+|++|.+++..+ ..+. .+++|+.|++++|++++.. +..+..+++++.+++.+|.
T Consensus 166 l~~~~~L~~L~L~~n~i~~~~~-~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~ 238 (461)
T 1z7x_W 166 LRAKPDFKELTVSNNDINEAGV-RVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNK 238 (461)
T ss_dssp HHHCTTCCEEECCSSBCHHHHH-HHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSB
T ss_pred HhhCCCCCEEECcCCCcchHHH-HHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCc
Confidence 6778889999999998874333 3333 2568888899988888732 3344556788888888775
|
| >3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A* | Back alignment and structure |
|---|
Probab=98.30 E-value=2.5e-07 Score=92.21 Aligned_cols=147 Identities=12% Similarity=0.015 Sum_probs=92.6
Q ss_pred cee-eecCCeEEEEEEEC-------CCCEEEEEEecCCCC--HHHHHHHHHHHHHHhhcC-C--CCccceeeEEecC---
Q 045127 244 NLV-GKNEGAAIYKGILR-------DGTRVKIEIYKGDVS--REIRDEFVEECKLLVQFQ-H--KNLIRVLGWNNSR--- 307 (508)
Q Consensus 244 ~~l-g~G~~g~V~~~~~~-------~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~-h--~niv~~~~~~~~~--- 307 (508)
+.| +.|....+|+.... +++.+++|+...... ......+.+|+.+++.+. + -.+.++++++.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 567 78888999988764 266788998753220 001245678888888874 2 3577788877654
Q ss_pred CeeEEEEeecCCCCHHHHhc----c---CCCCHHHHHHHHHHHHH-----------------------------------
Q 045127 308 RTRAIVTEWTNGGNVELWLS----E---SAPSWKHRLKVLIGVVE----------------------------------- 345 (508)
Q Consensus 308 ~~~~lv~e~~~~gsL~~~l~----~---~~l~~~~~~~i~~~i~~----------------------------------- 345 (508)
+..++||||++|.++.+.+. . ..++..++..++.++++
T Consensus 106 g~~~~v~e~l~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~La~LH~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 185 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPPDVMPYTFGDNWFADAPAERQRQLQDATVAALATLHSIPNAQNTFSFLTQGRTSDTTLHRHFNWV 185 (357)
T ss_dssp SSCEEEEECCCCBCCCBTTBGGGSCSTTTTSCHHHHHHHHHHHHHHHHHHTTCSSHHHHTGGGC-----CCHHHHHHHHH
T ss_pred CCceEEEEecCCCChhhcCcccccccccCCCCHHHHHHHHHHHHHHHHHHhCCCCccCChhhccCCCCCCchHHHHHHHH
Confidence 35689999999876543210 0 01111111112222222
Q ss_pred -------------------HHHHHh----------hCCCccccCCCCCCEEecCCCceEEeeccCCCCCCCcchh
Q 045127 346 -------------------AMCYLQ----------EQWPEVDYDLRTGSVLLTDNLEPLISRFKIEYQHRSTKYV 391 (508)
Q Consensus 346 -------------------~L~~LH----------~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~Dv 391 (508)
.++++. .. .++|+|++|.||+++++..+.|+||+.+....+..|+
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~-~l~HgDl~~~Nil~~~~~~~~vIDwe~a~~g~p~~Dl 259 (357)
T 3ats_A 186 RSWYDFAVEGIGRSPLLERTFEWLQSHWPDDAAAREP-VLLWGDARVGNVLYRDFQPVAVLDWEMVALGPRELDV 259 (357)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHTCCHHHHHSCC-EEECSSCSGGGEEEETTEEEEECCGGGCEEECHHHHH
T ss_pred HHHHHhhccCCCCChHHHHHHHHHHHhCCCcccCCCc-eEEeCCCCCCeEEEeCCcEEEEEcccccccCCcHHHH
Confidence 223332 23 6899999999999996555789999998877777775
|
| >2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A* | Back alignment and structure |
|---|
Probab=98.28 E-value=1.3e-06 Score=88.46 Aligned_cols=76 Identities=12% Similarity=-0.048 Sum_probs=49.6
Q ss_pred CceeeecCCeEEEEEEEC-CCCEEEEEEecCCCC---H---HHHHHHHHHHHHHhhcCC--C-CccceeeEEecCCeeEE
Q 045127 243 KNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVS---R---EIRDEFVEECKLLVQFQH--K-NLIRVLGWNNSRRTRAI 312 (508)
Q Consensus 243 ~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~---~~~~~~~~E~~~l~~l~h--~-niv~~~~~~~~~~~~~l 312 (508)
.+.+|.|..+.||++... +++.++||....... . ....++..|.++++.+.. + .+.+++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 467899999999999754 468899998753221 0 113456778888887742 3 34455544 3445689
Q ss_pred EEeecCCC
Q 045127 313 VTEWTNGG 320 (508)
Q Consensus 313 v~e~~~~g 320 (508)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999763
|
| >3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.27 E-value=2.4e-08 Score=100.34 Aligned_cols=124 Identities=17% Similarity=0.065 Sum_probs=71.8
Q ss_pred ccccCCCCCcccCCCccccC-----CCCCcCeEeCccCcccccCC-------ccccEEEcccCcccCCCChhhh-----c
Q 045127 53 LCNESKNPNCVESFPKIDLR-----SRPKITPLYLSFNFFWKYCP-------LGIMSIDLSNNSLKGAFPIDVL-----L 115 (508)
Q Consensus 53 l~~L~~~~n~~~~~p~~~~~-----~l~~L~~L~L~~N~l~~~~p-------~~l~~L~Ls~N~l~~~~p~~~~-----~ 115 (508)
+..|+...|.++......+. +.++|+.|+|++|.|+.... ..++.|+|++|+|+......+. .
T Consensus 74 L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~ 153 (372)
T 3un9_A 74 LRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHD 153 (372)
T ss_dssp CCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHST
T ss_pred CCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhc
Confidence 34445555555443221222 22577788888887753211 2347788888877644333332 3
Q ss_pred cCCccccccccccccC----cCCchhhhcCCccceeccccccccCcc----ccccccccccCCCCccCCC
Q 045127 116 CTQIQALDLSYNQLSG----DIPVESFSVLANLTFLNLSYNHFSEMK----VSDTKFFQRFNSSSFLHSG 177 (508)
Q Consensus 116 l~~L~~L~l~~N~l~g----~lp~~~~~~l~~L~~l~l~~N~l~~~~----~~~~~~l~~l~~~~~~~n~ 177 (508)
.++|++|+|++|+|++ .++ ..+..+++|++|+|++|+|+... ...+...++|..+++.+|.
T Consensus 154 ~~~L~~L~Ls~n~l~~~~~~~l~-~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~ 222 (372)
T 3un9_A 154 QCQITTLRLSNNPLTAAGVAVLM-EGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNG 222 (372)
T ss_dssp TCCCCEEECCSSCCHHHHHHHHH-HHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSC
T ss_pred CCccceeeCCCCCCChHHHHHHH-HHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCC
Confidence 4677888888887762 233 34466777888888888777521 2223345567777777765
|
| >3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A | Back alignment and structure |
|---|
Probab=98.25 E-value=8.7e-07 Score=84.09 Aligned_cols=83 Identities=25% Similarity=0.264 Sum_probs=60.8
Q ss_pred cCCCCCcCe--EeCccCccc---ccC------CccccEEEcccCcccC--CCChhhhccCCccccccccccccCcCCchh
Q 045127 71 LRSRPKITP--LYLSFNFFW---KYC------PLGIMSIDLSNNSLKG--AFPIDVLLCTQIQALDLSYNQLSGDIPVES 137 (508)
Q Consensus 71 ~~~l~~L~~--L~L~~N~l~---~~~------p~~l~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~l~~N~l~g~lp~~~ 137 (508)
|...+.|.. ++++.|+.. +.+ -+.++.|+|++|+|++ .+|..+..+++|+.|+|++|+|++ +. .
T Consensus 137 l~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~-~~--~ 213 (267)
T 3rw6_A 137 LRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKS-ER--E 213 (267)
T ss_dssp GGGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCS-GG--G
T ss_pred cCCCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCC-ch--h
Confidence 555566665 778888533 111 1367899999999987 456778899999999999999984 32 2
Q ss_pred hhcCC--ccceeccccccccC
Q 045127 138 FSVLA--NLTFLNLSYNHFSE 156 (508)
Q Consensus 138 ~~~l~--~L~~l~l~~N~l~~ 156 (508)
+..+. +|+.|+|++|.+++
T Consensus 214 l~~l~~l~L~~L~L~~Npl~~ 234 (267)
T 3rw6_A 214 LDKIKGLKLEELWLDGNSLCD 234 (267)
T ss_dssp GGGGTTSCCSEEECTTSTTGG
T ss_pred hhhcccCCcceEEccCCcCcc
Confidence 44454 89999999999987
|
| >4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A | Back alignment and structure |
|---|
Probab=98.22 E-value=1.9e-06 Score=87.35 Aligned_cols=107 Identities=7% Similarity=0.078 Sum_probs=51.7
Q ss_pred cccCCCccccCCCCCcCeEeCccCcccccCC-----ccccEEEcccCcccCCCChhhhccCCcccccccccccc----Cc
Q 045127 62 CVESFPKIDLRSRPKITPLYLSFNFFWKYCP-----LGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLS----GD 132 (508)
Q Consensus 62 ~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p-----~~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~----g~ 132 (508)
.+..|+..+|.++++|+.|+|..| ++..-. ..|+.+.|. |.++.+-+.+|.+|++|+.+++.+|.+. ..
T Consensus 213 ~l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~~~L~~i~lp-~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~ 290 (401)
T 4fdw_A 213 TLKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRESGITTVKLP-NGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAM 290 (401)
T ss_dssp TCCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTTCCCSEEEEE-TTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCE
T ss_pred chheehhhHhhCCCCCCEEecCCC-ccCccccccccCCccEEEeC-CCccEEChhHhhCCCCCCEEEeCCccccCCcccE
Confidence 466677667777777777777654 221111 223455552 3333344455555555555555554432 12
Q ss_pred CCchhhhcCCccceeccccccccCccccccccccccCCC
Q 045127 133 IPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSS 171 (508)
Q Consensus 133 lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~~~ 171 (508)
|+...|.++++|+.+++. |.++.+....|..+.+|+.+
T Consensus 291 I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l 328 (401)
T 4fdw_A 291 IHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQL 328 (401)
T ss_dssp ECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEE
T ss_pred ECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEE
Confidence 443445555555555554 22444333333333444333
|
| >3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A | Back alignment and structure |
|---|
Probab=98.21 E-value=2e-07 Score=88.47 Aligned_cols=62 Identities=23% Similarity=0.243 Sum_probs=34.8
Q ss_pred hccCCccccccccccccC--cCCchhhhcCCccceeccccccccCcccccccccc--ccCCCCccCCCC
Q 045127 114 LLCTQIQALDLSYNQLSG--DIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQ--RFNSSSFLHSGL 178 (508)
Q Consensus 114 ~~l~~L~~L~l~~N~l~g--~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~--~l~~~~~~~n~~ 178 (508)
.++++|+.|+|++|+|++ .+| ..+..+++|+.|+|++|+|++. ..+..+. +|..+.+.+|+.
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~-~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl 232 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMS-SIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSL 232 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGT-THHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTT
T ss_pred hhCCCCCEEECCCCCCCCCccch-hHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcC
Confidence 445666666666666664 344 4555666666666666666652 2223333 555566666653
|
| >3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.20 E-value=2.1e-07 Score=93.39 Aligned_cols=126 Identities=17% Similarity=0.091 Sum_probs=84.3
Q ss_pred cccccCCCCCcccCCCccc-cCCCCCcCeEeCccCccccc-----------CCccccEEEcccCcccC----CCChhhhc
Q 045127 52 HLCNESKNPNCVESFPKID-LRSRPKITPLYLSFNFFWKY-----------CPLGIMSIDLSNNSLKG----AFPIDVLL 115 (508)
Q Consensus 52 ~l~~L~~~~n~~~~~p~~~-~~~l~~L~~L~L~~N~l~~~-----------~p~~l~~L~Ls~N~l~~----~~p~~~~~ 115 (508)
.+..|++..|.++...... ...+++|+.|+|++|.|+.. ....+++|+|++|.|+. .++..+..
T Consensus 102 ~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~ 181 (372)
T 3un9_A 102 ALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAG 181 (372)
T ss_dssp CEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHT
T ss_pred CceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHhc
Confidence 4555555556554322112 23456888999999988632 12467899999998874 23445567
Q ss_pred cCCccccccccccccC----cCCchhhhcCCccceeccccccccCcccc----ccccccccCCCCccCCCC
Q 045127 116 CTQIQALDLSYNQLSG----DIPVESFSVLANLTFLNLSYNHFSEMKVS----DTKFFQRFNSSSFLHSGL 178 (508)
Q Consensus 116 l~~L~~L~l~~N~l~g----~lp~~~~~~l~~L~~l~l~~N~l~~~~~~----~~~~l~~l~~~~~~~n~~ 178 (508)
+++|++|+|++|+|++ .++ ..+...++|+.|+|++|.|+..... .+...++|..+++.+|+.
T Consensus 182 ~~~L~~L~Ls~N~l~~~g~~~L~-~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i 251 (372)
T 3un9_A 182 NTSVTHLSLLHTGLGDEGLELLA-AQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNEL 251 (372)
T ss_dssp CSSCCEEECTTSSCHHHHHHHHH-HHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSC
T ss_pred CCCcCEEeCCCCCCCcHHHHHHH-HHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCC
Confidence 8889999999998873 234 5566778899999999988863222 223457788888888864
|
| >2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.20 E-value=1.4e-05 Score=78.77 Aligned_cols=145 Identities=14% Similarity=0.115 Sum_probs=85.3
Q ss_pred ceeeecCCeEEEEEEECCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcC--CCCccceee------EEecCCeeEEEEe
Q 045127 244 NLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQ--HKNLIRVLG------WNNSRRTRAIVTE 315 (508)
Q Consensus 244 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~--h~niv~~~~------~~~~~~~~~lv~e 315 (508)
+.|+.|..+.||+....+| .+++|+.... . ..+..|..+++.+. .-.+.+++. +....+..+++||
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~--~---~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~ 111 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP--E---KKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYD 111 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSC--H---HHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEE
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCC--H---HHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEE
Confidence 4566677899999987655 5889998642 2 23334555555442 112333332 1224566789999
Q ss_pred ecCCCCHH-----H------H---hc--cC----C---------CCHHHH------------------------------
Q 045127 316 WTNGGNVE-----L------W---LS--ES----A---------PSWKHR------------------------------ 336 (508)
Q Consensus 316 ~~~~gsL~-----~------~---l~--~~----~---------l~~~~~------------------------------ 336 (508)
|++|.++. . . ++ .. . ..|...
T Consensus 112 ~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 191 (346)
T 2q83_A 112 WIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQE 191 (346)
T ss_dssp CCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHH
T ss_pred eecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHH
Confidence 99986542 1 1 11 11 1 122211
Q ss_pred -HHHHHHHHHHHHHHhh------------CCCccccCCCCCCEEecCCCceEEeeccCCCCCCCcchhhHH
Q 045127 337 -LKVLIGVVEAMCYLQE------------QWPEVDYDLRTGSVLLTDNLEPLISRFKIEYQHRSTKYVYKF 394 (508)
Q Consensus 337 -~~i~~~i~~~L~~LH~------------~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~Dv~Sl 394 (508)
..+..++..++++|+. ...++|||+++.||+++.++.+.++||+.+....+..|+..+
T Consensus 192 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~g~~~~Dla~~ 262 (346)
T 2q83_A 192 IDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSFDLPIRDLRKM 262 (346)
T ss_dssp HHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEECCTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcccCChHHHHHHH
Confidence 0111123345666652 228999999999999988889999999998877777777544
|
| >4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A | Back alignment and structure |
|---|
Probab=98.08 E-value=3.1e-06 Score=85.75 Aligned_cols=162 Identities=10% Similarity=0.080 Sum_probs=93.4
Q ss_pred ccccccCCCCCCCCCCcCCcCCCCCccccccCCCCCCcchhcc----ccccc-ccccccCCCCCcccCCCccccCCCCCc
Q 045127 3 VEDLNNLHPPPDFNSTIMNNCIHNPSLKYCNSSSPMDLNEIFK----STIVA-SHLCNESKNPNCVESFPKIDLRSRPKI 77 (508)
Q Consensus 3 ~~~l~~l~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~l~~~~~----~~~~~-~~l~~L~~~~n~~~~~p~~~~~~l~~L 77 (508)
|..|..++++.+....++..++.... +..+.+|.... ..... ..|..+.... .+..|+..+|.+ .+|
T Consensus 179 c~~L~~l~l~~n~l~~I~~~aF~~~~------L~~l~lp~~l~~I~~~aF~~~~~L~~l~l~~-~l~~I~~~aF~~-~~L 250 (401)
T 4fdw_A 179 CYNLKKADLSKTKITKLPASTFVYAG------IEEVLLPVTLKEIGSQAFLKTSQLKTIEIPE-NVSTIGQEAFRE-SGI 250 (401)
T ss_dssp CTTCCEEECTTSCCSEECTTTTTTCC------CSEEECCTTCCEECTTTTTTCTTCCCEECCT-TCCEECTTTTTT-CCC
T ss_pred cccCCeeecCCCcceEechhhEeecc------cCEEEeCCchheehhhHhhCCCCCCEEecCC-CccCcccccccc-CCc
Confidence 45677777888777888777765322 22222332110 00000 0222233322 356666666666 667
Q ss_pred CeEeCccCcccccCC------ccccEEEcccCccc-----CCCChhhhccCCccccccccccccCcCCchhhhcCCccce
Q 045127 78 TPLYLSFNFFWKYCP------LGIMSIDLSNNSLK-----GAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTF 146 (508)
Q Consensus 78 ~~L~L~~N~l~~~~p------~~l~~L~Ls~N~l~-----~~~p~~~~~l~~L~~L~l~~N~l~g~lp~~~~~~l~~L~~ 146 (508)
+.+.|. |.++..-+ ..|+.+++.+|.+. .+.+.+|.+|++|+.++|. |.++ .|+..+|.++++|+.
T Consensus 251 ~~i~lp-~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~-~I~~~aF~~c~~L~~ 327 (401)
T 4fdw_A 251 TTVKLP-NGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIR-ILGQGLLGGNRKVTQ 327 (401)
T ss_dssp SEEEEE-TTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCC-EECTTTTTTCCSCCE
T ss_pred cEEEeC-CCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceE-EEhhhhhcCCCCccE
Confidence 777773 33433222 23467777766654 3556677777777777777 4466 677677777777777
Q ss_pred eccccccccCccccccccccccCCCCccCCC
Q 045127 147 LNLSYNHFSEMKVSDTKFFQRFNSSSFLHSG 177 (508)
Q Consensus 147 l~l~~N~l~~~~~~~~~~l~~l~~~~~~~n~ 177 (508)
+++..| ++.+...+|..+ +|+.+.+.+|.
T Consensus 328 l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~ 356 (401)
T 4fdw_A 328 LTIPAN-VTQINFSAFNNT-GIKEVKVEGTT 356 (401)
T ss_dssp EEECTT-CCEECTTSSSSS-CCCEEEECCSS
T ss_pred EEECcc-ccEEcHHhCCCC-CCCEEEEcCCC
Confidence 777544 665455566666 67777666664
|
| >1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=97.92 E-value=1e-06 Score=79.17 Aligned_cols=107 Identities=8% Similarity=0.037 Sum_probs=70.7
Q ss_pred ccCCCCCcCeEeCccC-ccccc--------C--CccccEEEcccCcccCC----CChhhhccCCccccccccccccCc--
Q 045127 70 DLRSRPKITPLYLSFN-FFWKY--------C--PLGIMSIDLSNNSLKGA----FPIDVLLCTQIQALDLSYNQLSGD-- 132 (508)
Q Consensus 70 ~~~~l~~L~~L~L~~N-~l~~~--------~--p~~l~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~g~-- 132 (508)
.+...+.|++|+|++| .|... + -..+++|+|++|+|... +...+...+.|++|+|++|+|++.
T Consensus 31 ~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~ 110 (185)
T 1io0_A 31 IQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGI 110 (185)
T ss_dssp HHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHH
T ss_pred HHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHH
Confidence 4666778888888888 77531 1 13568888888888642 234455567888888888888732
Q ss_pred --CCchhhhcCCccceecc--ccccccCccc----cccccccccCCCCccCCC
Q 045127 133 --IPVESFSVLANLTFLNL--SYNHFSEMKV----SDTKFFQRFNSSSFLHSG 177 (508)
Q Consensus 133 --lp~~~~~~l~~L~~l~l--~~N~l~~~~~----~~~~~l~~l~~~~~~~n~ 177 (508)
+. ..+...++|+.|+| ++|.|+..-. ......++|..+++.+|.
T Consensus 111 ~~l~-~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~ 162 (185)
T 1io0_A 111 LALV-EALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQ 162 (185)
T ss_dssp HHHH-HGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSS
T ss_pred HHHH-HHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCC
Confidence 34 45666778888888 7788875221 122233567777777764
|
| >3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP} | Back alignment and structure |
|---|
Probab=97.91 E-value=3.1e-05 Score=76.18 Aligned_cols=144 Identities=6% Similarity=-0.026 Sum_probs=80.2
Q ss_pred ceeeecCCeE-EEEEEECCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcC--CCCccceeeEEecCCeeEEEEeecCCC
Q 045127 244 NLVGKNEGAA-IYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQ--HKNLIRVLGWNNSRRTRAIVTEWTNGG 320 (508)
Q Consensus 244 ~~lg~G~~g~-V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~~~lv~e~~~~g 320 (508)
+.|+.|+... +|+....++..+++|....... ..+..|+.+++.+. .-.+.+++.+....+ +++||++.+.
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~----~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~ 97 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG----GDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDA 97 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTTT----CCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSC
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCCC----ccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCc
Confidence 4566665554 6677654467777876643211 23345666666663 223566666643333 7899999776
Q ss_pred CHHHHhccC------------------------C---CCHHHHH-------HHH-------------HHHHHHHHHH---
Q 045127 321 NVELWLSES------------------------A---PSWKHRL-------KVL-------------IGVVEAMCYL--- 350 (508)
Q Consensus 321 sL~~~l~~~------------------------~---l~~~~~~-------~i~-------------~~i~~~L~~L--- 350 (508)
++.+++... . ++..... .+. ..+...++.+
T Consensus 98 ~l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~ 177 (333)
T 3csv_A 98 LFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSA 177 (333)
T ss_dssp BHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred chHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHh
Confidence 665433210 1 1111100 000 0111122222
Q ss_pred ---hhCCCccccCCCCCCEEecCC----CceEEeeccCCCCCCCcchhhHH
Q 045127 351 ---QEQWPEVDYDLRTGSVLLTDN----LEPLISRFKIEYQHRSTKYVYKF 394 (508)
Q Consensus 351 ---H~~~~iiH~Dlkp~NIll~~~----~~~kl~Dfg~~~~~~~~~Dv~Sl 394 (508)
+.. .++|||+.+.||+++.+ +.+.|+||+.+....+..|+.++
T Consensus 178 ~~~~~~-~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G~~~~DLa~l 227 (333)
T 3csv_A 178 QLEGDM-VFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLGHRAYDLVSL 227 (333)
T ss_dssp HCCSCC-EEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEECTTHHHHHH
T ss_pred cccCCC-eeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcCCCHHHHHHH
Confidence 223 78999999999999874 68899999999888888888754
|
| >3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT} | Back alignment and structure |
|---|
Probab=97.85 E-value=9.1e-05 Score=72.05 Aligned_cols=144 Identities=16% Similarity=0.107 Sum_probs=97.9
Q ss_pred CCceeeecCCeEEEEEEECCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcC---CCCccceeeEEecCCeeEEEEeecC
Q 045127 242 KKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQ---HKNLIRVLGWNNSRRTRAIVTEWTN 318 (508)
Q Consensus 242 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~~~~lv~e~~~ 318 (508)
..+.|+.|....+|+... ++..+++|+.... ....+..|...|+.+. ...+++++++....+..++||||++
T Consensus 40 ~~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~----~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~ 114 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLIND-EVQTVFVKINERS----YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALN 114 (312)
T ss_dssp EEEEECCSSSSEEEEEES-SSCEEEEEEEEGG----GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCC
T ss_pred eeEEeCCccceeeeEEEE-CCCeEEEEeCCcc----cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEecc
Confidence 346789999999999886 4678889987532 3567889999888884 3668889998887788999999999
Q ss_pred CCCHH--------HHh---c--cC--C-------------------CCHHHHH---HHH----------------HHHHH
Q 045127 319 GGNVE--------LWL---S--ES--A-------------------PSWKHRL---KVL----------------IGVVE 345 (508)
Q Consensus 319 ~gsL~--------~~l---~--~~--~-------------------l~~~~~~---~i~----------------~~i~~ 345 (508)
+..+. ..+ + .. . -+|.... ++. ..+++
T Consensus 115 G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~ 194 (312)
T 3jr1_A 115 KSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQ 194 (312)
T ss_dssp CCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHH
T ss_pred CCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHH
Confidence 87642 111 1 11 0 1354322 111 11222
Q ss_pred HH-HHHhh---CCCccccCCCCCCEEecCCCceEEeeccCCCCCCCcchhh
Q 045127 346 AM-CYLQE---QWPEVDYDLRTGSVLLTDNLEPLISRFKIEYQHRSTKYVY 392 (508)
Q Consensus 346 ~L-~~LH~---~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~Dv~ 392 (508)
.+ ..|.. ...++|+|+.+.|++++.++ +.|.|+. +..-.+..|+.
T Consensus 195 ~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~-~~~g~~~~Dl~ 243 (312)
T 3jr1_A 195 IVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA-CYWGDRECDIA 243 (312)
T ss_dssp HHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC-CEEECTHHHHH
T ss_pred HHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc-cccCChHHHHH
Confidence 22 23432 22789999999999999887 8999984 45556667765
|
| >1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=97.85 E-value=1.3e-06 Score=78.43 Aligned_cols=103 Identities=11% Similarity=0.092 Sum_probs=76.1
Q ss_pred cccccCCCCC-cccC-----CCccccCCCCCcCeEeCccCccccc----C------CccccEEEcccCcccCC----CCh
Q 045127 52 HLCNESKNPN-CVES-----FPKIDLRSRPKITPLYLSFNFFWKY----C------PLGIMSIDLSNNSLKGA----FPI 111 (508)
Q Consensus 52 ~l~~L~~~~n-~~~~-----~p~~~~~~l~~L~~L~L~~N~l~~~----~------p~~l~~L~Ls~N~l~~~----~p~ 111 (508)
.+..|++..| .++. +.. .+...++|++|+|++|.|... + ...+++|+|++|.|+.. +..
T Consensus 37 ~L~~L~L~~n~~i~~~g~~~l~~-~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~ 115 (185)
T 1io0_A 37 DLEEVNLNNIMNIPVPTLKACAE-ALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVE 115 (185)
T ss_dssp TCCEEECTTCTTCCHHHHHHHHH-HHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHH
T ss_pred CCCEEEecCCCCCCHHHHHHHHH-HHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHHH
Confidence 3444555555 5543 333 567788999999999999732 1 14679999999999853 355
Q ss_pred hhhccCCcccccc--ccccccCc----CCchhhhcCCccceeccccccccC
Q 045127 112 DVLLCTQIQALDL--SYNQLSGD----IPVESFSVLANLTFLNLSYNHFSE 156 (508)
Q Consensus 112 ~~~~l~~L~~L~l--~~N~l~g~----lp~~~~~~l~~L~~l~l~~N~l~~ 156 (508)
.+...+.|++|+| ++|.|+.. +. ..+...++|+.|+|++|.+..
T Consensus 116 ~L~~n~~L~~L~L~~~~N~i~~~g~~~l~-~~L~~n~~L~~L~L~~n~i~~ 165 (185)
T 1io0_A 116 ALQSNTSLIELRIDNQSQPLGNNVEMEIA-NMLEKNTTLLKFGYHFTQQGP 165 (185)
T ss_dssp GGGGCSSCCEEECCCCSSCCCHHHHHHHH-HHHHHCSSCCEEECCCSSHHH
T ss_pred HHHhCCCceEEEecCCCCCCCHHHHHHHH-HHHHhCCCcCEEeccCCCCCh
Confidence 6777889999999 88999843 33 456667899999999999875
|
| >2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.80 E-value=3.3e-05 Score=78.67 Aligned_cols=39 Identities=21% Similarity=0.233 Sum_probs=32.5
Q ss_pred hhCCCccccCCCCCCEEecCCCceEEeeccCCCCCCCcchh
Q 045127 351 QEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEYQHRSTKYV 391 (508)
Q Consensus 351 H~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~Dv 391 (508)
+.. .++|||++|.|||++.++ ++++||+.+....+..|+
T Consensus 230 ~~~-~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dl 268 (420)
T 2pyw_A 230 RAQ-ALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDI 268 (420)
T ss_dssp BCC-EEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHH
T ss_pred CCC-eEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHH
Confidence 445 899999999999999776 999999888766666665
|
| >1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=97.79 E-value=0.00018 Score=70.26 Aligned_cols=162 Identities=12% Similarity=0.128 Sum_probs=96.5
Q ss_pred CCCHHHHHHhhcCCCC-----CceeeecCCeEEEEEEECCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCC--CCccc
Q 045127 227 KFTTWMLKAATNGFSK-----KNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQH--KNLIR 299 (508)
Q Consensus 227 ~~~~~~l~~~~~~~~~-----~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~ 299 (508)
..+.+++....+.|.. ...++ |....||+....+|+.+++|....... ....+..|..+++.+.. -.+++
T Consensus 10 ~l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~--~~~~~~~E~~~~~~L~~~g~~vp~ 86 (328)
T 1zyl_A 10 TLHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPERW--TADQILEEHQFALQLVNDEVPVAA 86 (328)
T ss_dssp CCCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTTS--CHHHHHHHHHHHHHHHHTTCSBCC
T ss_pred CCCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcCCCCEEEEEEcCCCCC--CHHHHHHHHHHHHHHHHcCCeecc
Confidence 4455556555554432 34576 888899998877787899999864321 23456678877777642 12344
Q ss_pred eeeE-----EecCCeeEEEEeecCCCCHH-----HH---------hc----c------CCCCHHHH--------------
Q 045127 300 VLGW-----NNSRRTRAIVTEWTNGGNVE-----LW---------LS----E------SAPSWKHR-------------- 336 (508)
Q Consensus 300 ~~~~-----~~~~~~~~lv~e~~~~gsL~-----~~---------l~----~------~~l~~~~~-------------- 336 (508)
++.. ....+..+++|||++|..+. .+ ++ . ...++...
T Consensus 87 ~~~~~g~~~~~~~g~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 166 (328)
T 1zyl_A 87 PVAFNGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLI 166 (328)
T ss_dssp CCCBTTBSCEEETTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSS
T ss_pred eeecCCcEEEEECCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcC
Confidence 4433 12244568899999875432 11 11 1 01122111
Q ss_pred --------HHHHHHHHHHHHHH----hhCCCccccCCCCCCEEecCCCceEEeeccCCCCCCCcchhhHH
Q 045127 337 --------LKVLIGVVEAMCYL----QEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEYQHRSTKYVYKF 394 (508)
Q Consensus 337 --------~~i~~~i~~~L~~L----H~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~Dv~Sl 394 (508)
...+.+++..++-+ ... .++|||+++.||+++ + .+.++||+.+.......|++.+
T Consensus 167 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~g~~~~Dla~~ 233 (328)
T 1zyl_A 167 PSGLKAAFLKATDELIAAVTAHWREDFTV-LRLHGDCHAGNILWR-D-GPMFVDLDDARNGPAVQDLWML 233 (328)
T ss_dssp CTTTHHHHHHHHHHHHHHHHHHCCSCSCC-EECCSSCSGGGEEES-S-SEEECCCTTCCEECTTHHHHTT
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhhhcCCe-eeeeCCCCcccEeEc-C-CCEEEECCCCCcCcHHHHHHHH
Confidence 01111222222222 123 679999999999999 4 8999999998888888888754
|
| >3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=97.79 E-value=5.5e-05 Score=73.25 Aligned_cols=139 Identities=11% Similarity=-0.016 Sum_probs=83.1
Q ss_pred CCCCceeeecCCeEEEEEEECCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCc-cceeeEEecCCeeEEEEeec-
Q 045127 240 FSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNL-IRVLGWNNSRRTRAIVTEWT- 317 (508)
Q Consensus 240 ~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~e~~- 317 (508)
+...+.|+.|....+|+. ..+++|+...... ......+|..+++.+....+ .+++++. .+.-++++||+
T Consensus 20 ~~~i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~--~~~~r~~E~~~l~~l~~~g~~P~~~~~~--~~~~~~v~e~i~ 90 (301)
T 3dxq_A 20 YTGPLERLGGLTNLVFRA-----GDLCLRIPGKGTE--EYINRANEAVAAREAAKAGVSPEVLHVD--PATGVMVTRYIA 90 (301)
T ss_dssp CCSCEEEESCSSEEEEEE-----TTEEEEEECC------CCCHHHHHHHHHHHHHTTSSCCEEEEC--TTTCCEEEECCT
T ss_pred ccceeEcCCcccccccee-----eeEEEECCCCCcc--ceeCHHHHHHHHHHHHHcCCCCceEEEE--CCCCEEEEeecC
Confidence 334688999999999998 5688898854311 11123467777777642222 4555543 33457899999
Q ss_pred CCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhC--------------------------------------------
Q 045127 318 NGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQ-------------------------------------------- 353 (508)
Q Consensus 318 ~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~-------------------------------------------- 353 (508)
++.++..... ..+..++.++++.|+-||+.
T Consensus 91 ~g~~l~~~~~------~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 164 (301)
T 3dxq_A 91 GAQTMSPEKF------KTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRS 164 (301)
T ss_dssp TCEECCHHHH------HHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHH
T ss_pred CCccCCHhhH------hhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHH
Confidence 6544421000 00001122222222222221
Q ss_pred --------CCccccCCCCCCEEecCCCceEEeeccCCCCCCCcchhhHH
Q 045127 354 --------WPEVDYDLRTGSVLLTDNLEPLISRFKIEYQHRSTKYVYKF 394 (508)
Q Consensus 354 --------~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~Dv~Sl 394 (508)
..++|+|+.|.||+ ..++.+.++||..+....+..|+-.+
T Consensus 165 ~l~~~~~~~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~g~~~~Dla~~ 212 (301)
T 3dxq_A 165 ALAAHPLPLAACHCDPLCENFL-DTGERMWIVDWEYSGMNDPLWDLGDL 212 (301)
T ss_dssp HHHSSCCCCEEECSCCCGGGEE-ECSSCEEECCCTTCEEECTHHHHHHH
T ss_pred HHHhcCCCceeeccCCCcCCEE-ECCCCEEEEecccccCCCHHHHHHHH
Confidence 14799999999999 56777899999998877777776443
|
| >3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX} | Back alignment and structure |
|---|
Probab=97.69 E-value=0.00018 Score=69.02 Aligned_cols=78 Identities=21% Similarity=0.329 Sum_probs=56.0
Q ss_pred CCCCceeeecCCeEEEEEEECCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcC-C--CCccceeeEEecCCeeEEEEee
Q 045127 240 FSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQ-H--KNLIRVLGWNNSRRTRAIVTEW 316 (508)
Q Consensus 240 ~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h--~niv~~~~~~~~~~~~~lv~e~ 316 (508)
....+.+|.|..+.||+....||+.|++|+....... ....|..|...|+.+. . -.+++++++. ..++||||
T Consensus 17 v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~-~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~ 91 (288)
T 3f7w_A 17 VAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPA-LDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEW 91 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCC-CTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEEC
T ss_pred eEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcc-hhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEe
Confidence 3445789999999999999999999999987543221 2345788999988884 2 2345555543 23789999
Q ss_pred cCCCCH
Q 045127 317 TNGGNV 322 (508)
Q Consensus 317 ~~~gsL 322 (508)
++++..
T Consensus 92 l~~~~~ 97 (288)
T 3f7w_A 92 VDERPP 97 (288)
T ss_dssp CCCCCC
T ss_pred ecccCC
Confidence 987643
|
| >2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=97.65 E-value=0.00014 Score=70.99 Aligned_cols=168 Identities=11% Similarity=0.081 Sum_probs=95.0
Q ss_pred CCCHHHHHHhhcCCCCC-----ceeeecCCeEEEEEEECCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCC--ccc
Q 045127 227 KFTTWMLKAATNGFSKK-----NLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKN--LIR 299 (508)
Q Consensus 227 ~~~~~~l~~~~~~~~~~-----~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~ 299 (508)
.++.+++......|... +.|+.|....+|+....+| .+++|+...... ...+..|+.++..+.... +.+
T Consensus 6 ~~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~~---~~~l~~e~~~l~~L~~~g~~vP~ 81 (322)
T 2ppq_A 6 DITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRVE---KNDLPFFLGLMQHLAAKGLSCPL 81 (322)
T ss_dssp CCCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC------CCHHHHHHHHHHHHHHTTCCCCC
T ss_pred cCCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCCC---HHHHHHHHHHHHHHHHCCCCCCc
Confidence 45666777776667652 4466788899999987655 678998865211 234556777776663111 333
Q ss_pred eeeE------EecCCeeEEEEeecCCCCHHH-----H---------hc--cCC--------C---CHHHHHH--------
Q 045127 300 VLGW------NNSRRTRAIVTEWTNGGNVEL-----W---------LS--ESA--------P---SWKHRLK-------- 338 (508)
Q Consensus 300 ~~~~------~~~~~~~~lv~e~~~~gsL~~-----~---------l~--~~~--------l---~~~~~~~-------- 338 (508)
++.. ....+..+++|+|++|..+.. + ++ ... . .|.....
T Consensus 82 ~~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~ 161 (322)
T 2ppq_A 82 PLPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADE 161 (322)
T ss_dssp BCCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGG
T ss_pred ccCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHh
Confidence 3321 122356689999998865321 0 11 001 1 1222110
Q ss_pred ----HHHHHHHHHHHHhhC------CCccccCCCCCCEEecCCCceEEeeccCCCCCCCcchhhHHHHHHHHH
Q 045127 339 ----VLIGVVEAMCYLQEQ------WPEVDYDLRTGSVLLTDNLEPLISRFKIEYQHRSTKYVYKFGLFLLEM 401 (508)
Q Consensus 339 ----i~~~i~~~L~~LH~~------~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~Dv~SlGvil~el 401 (508)
+...+.+.+++++.. .+++|+|+++.||+++++..+.++||+.+.......|+ ++++..+
T Consensus 162 ~~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~g~~~~Dl---a~~l~~~ 231 (322)
T 2ppq_A 162 VEKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACNDLLAYDV---SICLNAW 231 (322)
T ss_dssp TSTTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEEEEHHHHH---HHHHHHH
T ss_pred hhhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccCchhHHHH---HHHHHHH
Confidence 001134445555421 17899999999999998766689999988765555555 4444443
|
| >3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* | Back alignment and structure |
|---|
Probab=97.64 E-value=1.6e-06 Score=92.33 Aligned_cols=104 Identities=9% Similarity=0.068 Sum_probs=45.4
Q ss_pred ccCCCCCcCeEeCccCcccccC-------CccccEEEcccCcccCCCChhhhccCCccccccc-----------cccccC
Q 045127 70 DLRSRPKITPLYLSFNFFWKYC-------PLGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLS-----------YNQLSG 131 (508)
Q Consensus 70 ~~~~l~~L~~L~L~~N~l~~~~-------p~~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~-----------~N~l~g 131 (508)
.+..+++|++|+|++|.+++.. .+.++.|+|++|...+.++..+..+++|++|+|+ .|.+++
T Consensus 288 ~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~ 367 (592)
T 3ogk_B 288 LFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQ 367 (592)
T ss_dssp GGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCH
T ss_pred HHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCH
Confidence 4445555555555555543211 1234555555222222222233445555555555 244442
Q ss_pred cCCchhhhcCCccceeccccccccCcccccccc-ccccCCCCc
Q 045127 132 DIPVESFSVLANLTFLNLSYNHFSEMKVSDTKF-FQRFNSSSF 173 (508)
Q Consensus 132 ~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~-l~~l~~~~~ 173 (508)
.-....+..+++|+.|+++.|++++..+..+.. +++|+.+.+
T Consensus 368 ~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l 410 (592)
T 3ogk_B 368 RGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRL 410 (592)
T ss_dssp HHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEE
T ss_pred HHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEE
Confidence 211122334555555555555555422222222 444444444
|
| >3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* | Back alignment and structure |
|---|
Probab=97.63 E-value=1.8e-05 Score=84.10 Aligned_cols=78 Identities=12% Similarity=0.093 Sum_probs=55.0
Q ss_pred CCCCCcCeEeCccCcccccC-------C---ccccEEEcccCcccC----CCChhhhccCCccccccccccccCcCCchh
Q 045127 72 RSRPKITPLYLSFNFFWKYC-------P---LGIMSIDLSNNSLKG----AFPIDVLLCTQIQALDLSYNQLSGDIPVES 137 (508)
Q Consensus 72 ~~l~~L~~L~L~~N~l~~~~-------p---~~l~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~l~~N~l~g~lp~~~ 137 (508)
.++++|++|+|++|.+++.- + +.|++|+|++|.+++ .++..+.++++|+.|+|++|.+. .+| ..
T Consensus 161 ~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~-~l~-~~ 238 (592)
T 3ogk_B 161 THCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEIL-ELV-GF 238 (592)
T ss_dssp HHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGG-GGH-HH
T ss_pred hhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHH-HHH-HH
Confidence 46778888888888775431 1 356888888888863 33444567788888888888887 466 66
Q ss_pred hhcCCccceecccc
Q 045127 138 FSVLANLTFLNLSY 151 (508)
Q Consensus 138 ~~~l~~L~~l~l~~ 151 (508)
+..+++|+.|+++.
T Consensus 239 ~~~~~~L~~L~l~~ 252 (592)
T 3ogk_B 239 FKAAANLEEFCGGS 252 (592)
T ss_dssp HHHCTTCCEEEECB
T ss_pred HhhhhHHHhhcccc
Confidence 77777777777764
|
| >3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A* | Back alignment and structure |
|---|
Probab=97.45 E-value=9.9e-05 Score=61.91 Aligned_cols=56 Identities=21% Similarity=0.315 Sum_probs=33.4
Q ss_pred EEEcccCccc-CCCChhhhccCCccccccccccccCcCCchhhhcCCccceecccccccc
Q 045127 97 SIDLSNNSLK-GAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFS 155 (508)
Q Consensus 97 ~L~Ls~N~l~-~~~p~~~~~l~~L~~L~l~~N~l~g~lp~~~~~~l~~L~~l~l~~N~l~ 155 (508)
.++.+++.++ ..+|..+. .+|++|+|++|+|+ .||.+.|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~-~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLT-ALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCS-SCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCC-ccChhhhhhccccCEEEecCCCee
Confidence 4555555554 23343221 34677777777777 666666677777777766666655
|
| >2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* | Back alignment and structure |
|---|
Probab=97.34 E-value=2.7e-05 Score=82.80 Aligned_cols=83 Identities=12% Similarity=0.060 Sum_probs=43.3
Q ss_pred cccEEEcccCcccCCCChhhhc-cCCccccccccccccCcCCchhhhcCCccceeccccccccCcccc-ccccccccCCC
Q 045127 94 GIMSIDLSNNSLKGAFPIDVLL-CTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVS-DTKFFQRFNSS 171 (508)
Q Consensus 94 ~l~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~l~~N~l~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~-~~~~l~~l~~~ 171 (508)
.++.|+|++ .+++..+..+.. +++|+.|+|++|.+++..+......+++|+.|++++|++++.... ....+++|+.+
T Consensus 433 ~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L 511 (594)
T 2p1m_B 433 DLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSL 511 (594)
T ss_dssp TCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEE
T ss_pred CccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEE
Confidence 345566654 444333334433 566666666666665433312224566666666666666542222 22335666666
Q ss_pred CccCCC
Q 045127 172 SFLHSG 177 (508)
Q Consensus 172 ~~~~n~ 177 (508)
++.+|+
T Consensus 512 ~l~~~~ 517 (594)
T 2p1m_B 512 WMSSCS 517 (594)
T ss_dssp EEESSC
T ss_pred eeeCCC
Confidence 666654
|
| >1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8 | Back alignment and structure |
|---|
Probab=97.32 E-value=0.00029 Score=71.75 Aligned_cols=72 Identities=10% Similarity=0.203 Sum_probs=49.6
Q ss_pred ceeeecCCeEEEEEEECC--------CCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCC-ccceeeEEecCCeeEEEE
Q 045127 244 NLVGKNEGAAIYKGILRD--------GTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKN-LIRVLGWNNSRRTRAIVT 314 (508)
Q Consensus 244 ~~lg~G~~g~V~~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~~~~~~~~~~~~~lv~ 314 (508)
+.|+.|....+|++..++ +..+++|+...... ...+..|..+++.+...+ .+++++.+.+ .+||
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~~---~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~ 151 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPET---ESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLE 151 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCC---HHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEE
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCCc---HHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEE
Confidence 568888899999998753 47899999843222 134557988888885333 3567765542 3899
Q ss_pred eecCCCCH
Q 045127 315 EWTNGGNV 322 (508)
Q Consensus 315 e~~~~gsL 322 (508)
||++|.++
T Consensus 152 e~l~G~~l 159 (429)
T 1nw1_A 152 EYIPSRPL 159 (429)
T ss_dssp CCCCEEEC
T ss_pred EEeCCccc
Confidence 99986443
|
| >3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A* | Back alignment and structure |
|---|
Probab=97.24 E-value=0.0016 Score=64.06 Aligned_cols=40 Identities=13% Similarity=0.124 Sum_probs=35.2
Q ss_pred CccccCCCCCCEEecCCCceEEeeccCCCCCCCcchhhHH
Q 045127 355 PEVDYDLRTGSVLLTDNLEPLISRFKIEYQHRSTKYVYKF 394 (508)
Q Consensus 355 ~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~Dv~Sl 394 (508)
.++|+|+.+.||++++++.+.++||+.+....+..|+..+
T Consensus 207 ~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~~~~~Dla~~ 246 (339)
T 3i1a_A 207 VLCHSDIHAGNVLVGNEESIYIIDWDEPMLAPKERDLMFI 246 (339)
T ss_dssp EEECSCCCGGGEEECGGGCEEECCCSSCEEECTHHHHTTT
T ss_pred eeEeCCCCcCCEEEeCCCeEEEEECCCCeeCCHHHHHHHH
Confidence 7899999999999998888999999988888888887654
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=97.21 E-value=7.9e-05 Score=74.13 Aligned_cols=121 Identities=13% Similarity=0.065 Sum_probs=71.6
Q ss_pred cccccCCCCCcccCCCccccCCCCCcCeEeCccC--------ccc-ccCCccccEEEccc--CcccCC-----CChhh--
Q 045127 52 HLCNESKNPNCVESFPKIDLRSRPKITPLYLSFN--------FFW-KYCPLGIMSIDLSN--NSLKGA-----FPIDV-- 113 (508)
Q Consensus 52 ~l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N--------~l~-~~~p~~l~~L~Ls~--N~l~~~-----~p~~~-- 113 (508)
.|..|....|.--.+++ +. +++|+.|+|..| .+. ..+| .|+.|+|+. |...+. +...+
T Consensus 173 ~L~~L~L~g~~~l~l~~--~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp-~L~~L~L~~~~~~~~~~~~~~~l~~~l~~ 248 (362)
T 2ra8_A 173 LLNNLKIKGTNNLSIGK--KP-RPNLKSLEIISGGLPDSVVEDILGSDLP-NLEKLVLYVGVEDYGFDGDMNVFRPLFSK 248 (362)
T ss_dssp TCCEEEEECCBTCBCCS--CB-CTTCSEEEEECSBCCHHHHHHHHHSBCT-TCCEEEEECBCGGGTCCSCGGGTGGGSCT
T ss_pred CCcEEEEeCCCCceecc--cc-CCCCcEEEEecCCCChHHHHHHHHccCC-CCcEEEEeccccccccchhHHHHHHHHhc
Confidence 34444443332123443 33 788888888755 121 1244 688888853 222111 11122
Q ss_pred hccCCccccccccccccCcCCchhhh---cCCccceeccccccccCcc----ccccccccccCCCCccCCC
Q 045127 114 LLCTQIQALDLSYNQLSGDIPVESFS---VLANLTFLNLSYNHFSEMK----VSDTKFFQRFNSSSFLHSG 177 (508)
Q Consensus 114 ~~l~~L~~L~l~~N~l~g~lp~~~~~---~l~~L~~l~l~~N~l~~~~----~~~~~~l~~l~~~~~~~n~ 177 (508)
..+++|++|+|++|++++..+ ..+. .+++|+.|+|++|.|++.- ......+++|..+++.+|.
T Consensus 249 ~~~p~Lr~L~L~~~~i~~~~~-~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~ 318 (362)
T 2ra8_A 249 DRFPNLKWLGIVDAEEQNVVV-EMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNY 318 (362)
T ss_dssp TTCTTCCEEEEESCTTHHHHH-HHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBB
T ss_pred CCCCCcCEEeCCCCCCchHHH-HHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCc
Confidence 247889999999998875444 3333 4788999999999888621 1222456778888887774
|
| >3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A* | Back alignment and structure |
|---|
Probab=97.18 E-value=0.00054 Score=68.42 Aligned_cols=150 Identities=13% Similarity=0.163 Sum_probs=91.1
Q ss_pred ceeeecCCeEEEEEEECC--------CCEEEEEEecCCCCHHHHHHHHHHHHHHhhcC-CCCccceeeEEecCCeeEEEE
Q 045127 244 NLVGKNEGAAIYKGILRD--------GTRVKIEIYKGDVSREIRDEFVEECKLLVQFQ-HKNLIRVLGWNNSRRTRAIVT 314 (508)
Q Consensus 244 ~~lg~G~~g~V~~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~ 314 (508)
+.+..|-...+|++..++ ++.+++|+..... .....+.+|.++++.+. +.-..++++++.+ .+||
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~--~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~ 129 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAIL--QGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLE 129 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC-----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCcc--chHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEE
Confidence 567788889999998752 4789999863211 12455668999988874 3334667766543 3899
Q ss_pred eecCCCCHHH-----------H---hc---c------CCCC--HHHHHHHHHHHHH-------------------HHHHH
Q 045127 315 EWTNGGNVEL-----------W---LS---E------SAPS--WKHRLKVLIGVVE-------------------AMCYL 350 (508)
Q Consensus 315 e~~~~gsL~~-----------~---l~---~------~~l~--~~~~~~i~~~i~~-------------------~L~~L 350 (508)
||++|.++.. . +. . .... +.++.++..++.. .+..|
T Consensus 130 e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L 209 (379)
T 3feg_A 130 QYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNL 209 (379)
T ss_dssp ECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHH
T ss_pred EEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHH
Confidence 9999865431 1 11 1 1122 3455555544322 12333
Q ss_pred h----hC---CCccccCCCCCCEEecCC----CceEEeeccCCCCCCCcchhhHHHHHHHHHH
Q 045127 351 Q----EQ---WPEVDYDLRTGSVLLTDN----LEPLISRFKIEYQHRSTKYVYKFGLFLLEMI 402 (508)
Q Consensus 351 H----~~---~~iiH~Dlkp~NIll~~~----~~~kl~Dfg~~~~~~~~~Dv~SlGvil~ell 402 (508)
. .. ..++|+|+.+.||+++.+ +.+.++||..+....+..| +|..+.+..
T Consensus 210 ~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~~~~~~D---la~~~~~~~ 269 (379)
T 3feg_A 210 RKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSYNYRGFD---IGNHFCEWV 269 (379)
T ss_dssp HHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEEEEHHHH---HHHHHHHTT
T ss_pred HHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCcCChHHH---HHHHHHHHH
Confidence 2 21 167999999999999876 7899999998876655555 466666665
|
| >2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* | Back alignment and structure |
|---|
Probab=97.10 E-value=4.3e-05 Score=81.16 Aligned_cols=85 Identities=13% Similarity=0.043 Sum_probs=66.7
Q ss_pred cCCCCCcCeEeCccCcccccC-------CccccEEEcccCcccCCCChhh-hccCCccccccccccccCcCCchhhhcCC
Q 045127 71 LRSRPKITPLYLSFNFFWKYC-------PLGIMSIDLSNNSLKGAFPIDV-LLCTQIQALDLSYNQLSGDIPVESFSVLA 142 (508)
Q Consensus 71 ~~~l~~L~~L~L~~N~l~~~~-------p~~l~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~l~~N~l~g~lp~~~~~~l~ 142 (508)
+.++++|+.|+|++ .+++.. .+.+++|+|++|.+++..+..+ .++++|+.|+|++|.+++..+...+..++
T Consensus 428 ~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~ 506 (594)
T 2p1m_B 428 VEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLE 506 (594)
T ss_dssp HHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGG
T ss_pred HhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCC
Confidence 56778899999977 555321 3468999999999986656565 77999999999999997544423556689
Q ss_pred ccceeccccccccC
Q 045127 143 NLTFLNLSYNHFSE 156 (508)
Q Consensus 143 ~L~~l~l~~N~l~~ 156 (508)
+|+.|++++|+++.
T Consensus 507 ~L~~L~l~~~~~~~ 520 (594)
T 2p1m_B 507 TMRSLWMSSCSVSF 520 (594)
T ss_dssp GSSEEEEESSCCBH
T ss_pred CCCEEeeeCCCCCH
Confidence 99999999999854
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=97.06 E-value=0.0002 Score=71.13 Aligned_cols=106 Identities=15% Similarity=0.158 Sum_probs=70.4
Q ss_pred ccCCCCCcCeEeCccCc-ccccCC----ccccEEEcccCcccCCCChhhh--ccCCcccccccc--ccccCc-----CCc
Q 045127 70 DLRSRPKITPLYLSFNF-FWKYCP----LGIMSIDLSNNSLKGAFPIDVL--LCTQIQALDLSY--NQLSGD-----IPV 135 (508)
Q Consensus 70 ~~~~l~~L~~L~L~~N~-l~~~~p----~~l~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~l~~--N~l~g~-----lp~ 135 (508)
.+..+++|+.|+|++|. +. +| ..|+.|+|..|.++......+. .+++|+.|+|+. |...|. +.
T Consensus 167 ll~~~P~L~~L~L~g~~~l~--l~~~~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~- 243 (362)
T 2ra8_A 167 VLDAMPLLNNLKIKGTNNLS--IGKKPRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFR- 243 (362)
T ss_dssp HHHTCTTCCEEEEECCBTCB--CCSCBCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTG-
T ss_pred HHhcCCCCcEEEEeCCCCce--eccccCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHH-
Confidence 45677899999999883 22 22 4679999998888754434444 689999999864 332211 11
Q ss_pred hhh--hcCCccceeccccccccCcccccc---ccccccCCCCccCCCC
Q 045127 136 ESF--SVLANLTFLNLSYNHFSEMKVSDT---KFFQRFNSSSFLHSGL 178 (508)
Q Consensus 136 ~~~--~~l~~L~~l~l~~N~l~~~~~~~~---~~l~~l~~~~~~~n~~ 178 (508)
..+ ..+++|+.|+|++|.+........ ..+++|+.++++.|..
T Consensus 244 ~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L 291 (362)
T 2ra8_A 244 PLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVL 291 (362)
T ss_dssp GGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCC
T ss_pred HHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCC
Confidence 122 347899999999999875211111 2467888888887754
|
| >4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=96.98 E-value=0.0017 Score=65.24 Aligned_cols=107 Identities=14% Similarity=0.180 Sum_probs=60.0
Q ss_pred ccCCCccccCCCCCcCeEeCccCccccc-------------------CC-------ccccEEEcccCcccCCCChhhhcc
Q 045127 63 VESFPKIDLRSRPKITPLYLSFNFFWKY-------------------CP-------LGIMSIDLSNNSLKGAFPIDVLLC 116 (508)
Q Consensus 63 ~~~~p~~~~~~l~~L~~L~L~~N~l~~~-------------------~p-------~~l~~L~Ls~N~l~~~~p~~~~~l 116 (508)
+..++...|.++..|+.+.+..|...-. +| ..++.+.+..+ ++.+-..+|.++
T Consensus 241 ~~~i~~~~f~~~~~l~~~~~~~~~~~i~~~~F~~~~~l~~~~~~~~~i~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c 319 (394)
T 4fs7_A 241 FTELGKSVFYGCTDLESISIQNNKLRIGGSLFYNCSGLKKVIYGSVIVPEKTFYGCSSLTEVKLLDS-VKFIGEEAFESC 319 (394)
T ss_dssp CCEECSSTTTTCSSCCEEEECCTTCEECSCTTTTCTTCCEEEECSSEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC
T ss_pred ceecccccccccccceeEEcCCCcceeeccccccccccceeccCceeeccccccccccccccccccc-cceechhhhcCC
Confidence 3444544566667777777665543200 01 22355565544 443445666777
Q ss_pred CCccccccccccccCcCCchhhhcCCccceeccccccccCccccccccccccCCCCc
Q 045127 117 TQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSF 173 (508)
Q Consensus 117 ~~L~~L~l~~N~l~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~ 173 (508)
.+|+.++|..+ ++ .|+..+|.++.+|+.+++..| ++.+...+|..+.+|+.+.+
T Consensus 320 ~~L~~i~lp~~-v~-~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~l 373 (394)
T 4fs7_A 320 TSLVSIDLPYL-VE-EIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVEL 373 (394)
T ss_dssp TTCCEECCCTT-CC-EECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEE
T ss_pred CCCCEEEeCCc-cc-EEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEE
Confidence 77777777543 55 566566777777777777655 55544445555555555544
|
| >3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A* | Back alignment and structure |
|---|
Probab=96.97 E-value=0.00057 Score=68.07 Aligned_cols=149 Identities=14% Similarity=0.139 Sum_probs=83.0
Q ss_pred ceeeecCCeEEEEEEECC---------CCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCC-ccceeeEEecCCeeEEE
Q 045127 244 NLVGKNEGAAIYKGILRD---------GTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKN-LIRVLGWNNSRRTRAIV 313 (508)
Q Consensus 244 ~~lg~G~~g~V~~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~~~~~~~~~~~~~lv 313 (508)
+.++.|....+|+....+ +..+++|+...... .......|..+++.+...+ +.++++.. . -++|
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~--~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~v 112 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD--ELYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGRI 112 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG--GTSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc--ceecHHHHHHHHHHHHhcCCCCceEEec--C--CcEE
Confidence 567788889999998754 26888998754321 1112357888887774333 44666544 2 3689
Q ss_pred EeecCCCCHHH--------------Hhc-------cC----CCC-----HHHHHHHHHH--------------------H
Q 045127 314 TEWTNGGNVEL--------------WLS-------ES----APS-----WKHRLKVLIG--------------------V 343 (508)
Q Consensus 314 ~e~~~~gsL~~--------------~l~-------~~----~l~-----~~~~~~i~~~--------------------i 343 (508)
|||++|.++.. .+. .. .++ +.....+..+ +
T Consensus 113 ~e~i~G~~l~~~~~~~~~~~~~~a~~La~lH~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (369)
T 3c5i_A 113 EEWLYGDPLRIDDLKNPTILIGIANVLGKFHTLSRKRHLPEHWDRTPCIFKMMEKWKNQLFKYKNIEKYNCDIHKYIKES 192 (369)
T ss_dssp EECCCSEECCGGGGGCHHHHHHHHHHHHHHHTHHHHSCCCTTSCCSCHHHHHHHHHHHHHTTCSSGGGC-CCHHHHHHHH
T ss_pred EEEecCCcCChhhcCChHHHHHHHHHHHHHHcCcccccCcccCCCCCcHHHHHHHHHHHHhhhhhHHHHHhhHHHHHHHH
Confidence 99998754310 000 11 111 1111111111 1
Q ss_pred HHHHHHHhh--------C-CCccccCCCCCCEEecCCCceEEeeccCCCCCCCcchhhHHHHHHHHHH
Q 045127 344 VEAMCYLQE--------Q-WPEVDYDLRTGSVLLTDNLEPLISRFKIEYQHRSTKYVYKFGLFLLEMI 402 (508)
Q Consensus 344 ~~~L~~LH~--------~-~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~Dv~SlGvil~ell 402 (508)
...++++.. . ..++|+|+++.||+++++. +.++||..+....+..|+ |.++.+..
T Consensus 193 ~~l~~~l~~~~~~~~~~~~~~l~HgDl~~~Nil~~~~~-~~lID~e~a~~g~~~~Dl---a~~~~~~~ 256 (369)
T 3c5i_A 193 DKFIKFMKVYSKSDNLANTIVFCHNDLQENNIINTNKC-LRLIDFEYSGFNFLATDI---ANFFIETS 256 (369)
T ss_dssp HHHHHHHHHHTTSSCGGGCEEEECSCCCGGGEEECC-C-EEECCCTTCEEEEHHHHH---HHHHHGGG
T ss_pred HHHHHHHHHhhhhcccCCCeEEEeCCCCcccEEecCCc-EEEEEecCCCCCchHHHH---HHHHHHHh
Confidence 122333322 1 1689999999999998654 899999988766666664 55555543
|
| >2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax} | Back alignment and structure |
|---|
Probab=96.61 E-value=0.0036 Score=64.10 Aligned_cols=74 Identities=12% Similarity=0.117 Sum_probs=48.0
Q ss_pred CceeeecCCeEEEEEEECC-CCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCc-cceeeEEecCCeeEEEEeecCCC
Q 045127 243 KNLVGKNEGAAIYKGILRD-GTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNL-IRVLGWNNSRRTRAIVTEWTNGG 320 (508)
Q Consensus 243 ~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~e~~~~g 320 (508)
.+.|+.|-...+|++...+ +..+++|+....... .-...+|..+++.+...++ .++++++. + .+||||++|.
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~--~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~ 186 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDE--IINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGY 186 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCS--CSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSE
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhh--hcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCc
Confidence 3678889999999998865 478889987432211 1112578888888864444 56777663 2 3599999875
Q ss_pred CH
Q 045127 321 NV 322 (508)
Q Consensus 321 sL 322 (508)
++
T Consensus 187 ~l 188 (458)
T 2qg7_A 187 AL 188 (458)
T ss_dssp EC
T ss_pred cC
Confidence 44
|
| >3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A* | Back alignment and structure |
|---|
Probab=96.61 E-value=0.0016 Score=54.48 Aligned_cols=65 Identities=17% Similarity=0.160 Sum_probs=48.5
Q ss_pred cCCcCCCCCccccccCCCCC--CcchhcccccccccccccCCCCCcccCCCccccCCCCCcCeEeCccCccc
Q 045127 19 IMNNCIHNPSLKYCNSSSPM--DLNEIFKSTIVASHLCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFW 88 (508)
Q Consensus 19 ~~~~c~~~~~~~~~~~~~~~--~l~~~~~~~~~~~~l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~ 88 (508)
.|..|.+....+.|+..... .+|..+. ..+..|++..|.+++||.+.|..+++|+.|+|++|.+.
T Consensus 2 CP~~C~C~~~~v~Cs~~~L~~~~vP~~lp-----~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 2 CPAPCSCAGTLVDCGRRGLTWASLPTAFP-----VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp CCTTCEEETTEEECCSSCCCTTTSCSCCC-----TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred cCCCCEEcCCEEEeCCCCCccccCCCCCC-----cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 46678777778999877665 6765432 24555666778888998878888888998888888764
|
| >4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum} | Back alignment and structure |
|---|
Probab=96.35 E-value=0.0054 Score=61.02 Aligned_cols=109 Identities=9% Similarity=0.125 Sum_probs=71.2
Q ss_pred ccCCCccccCCCCCcCeEeCccCcccccCC------ccccEEEcccCcccCCCChhhhccCCccccccccccccCcCCch
Q 045127 63 VESFPKIDLRSRPKITPLYLSFNFFWKYCP------LGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVE 136 (508)
Q Consensus 63 ~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p------~~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp~~ 136 (508)
+..++...|.++..|+.+.+..+ ++..-. ..++.+.+..+ ++......|.++.+|+.+++.+|.++ .|+..
T Consensus 228 ~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~-~I~~~ 304 (379)
T 4h09_A 228 VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIE-TLEPR 304 (379)
T ss_dssp CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCC-EECTT
T ss_pred eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccc-eehhh
Confidence 44455556666777777777554 322111 23466777544 44455667888888888888888888 77777
Q ss_pred hhhcCCccceeccccccccCccccccccccccCCCCccC
Q 045127 137 SFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLH 175 (508)
Q Consensus 137 ~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~~~ 175 (508)
+|.++.+|+.+.|..+ ++.+...+|.++.+|+.+.+..
T Consensus 305 aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~ 342 (379)
T 4h09_A 305 VFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPK 342 (379)
T ss_dssp TTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCT
T ss_pred hhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECC
Confidence 8888888888888654 6654455666666776665543
|
| >4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165} | Back alignment and structure |
|---|
Probab=96.26 E-value=0.0057 Score=61.30 Aligned_cols=112 Identities=12% Similarity=0.123 Sum_probs=79.8
Q ss_pred CcccCCCccccCCCCCcCeEeCccCccccc---C--CccccEEEcccCcccCCCChhhhccCCccccccccccccCcCCc
Q 045127 61 NCVESFPKIDLRSRPKITPLYLSFNFFWKY---C--PLGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPV 135 (508)
Q Consensus 61 n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~---~--p~~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp~ 135 (508)
+.+..+...+|.++++|+.+.+..+..+-. . -..|+.+.+. +.++.+-..+|.++.+|+.++|..| ++ .|..
T Consensus 251 ~~v~~i~~~aF~~c~~L~~i~lp~~~~~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~-~I~~ 327 (394)
T 4gt6_A 251 NGVARIETHAFDSCAYLASVKMPDSVVSIGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-IT-QILD 327 (394)
T ss_dssp TTEEEECTTTTTTCSSCCEEECCTTCCEECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CC-EECT
T ss_pred CcceEcccceeeecccccEEecccccceecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-cc-EehH
Confidence 345556666788899999999876643210 0 1345778876 4555566778888899999988765 66 7776
Q ss_pred hhhhcCCccceeccccccccCccccccccccccCCCCccCC
Q 045127 136 ESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLHS 176 (508)
Q Consensus 136 ~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~~~n 176 (508)
.+|.++.+|+.+.+..+ ++.+...+|.++.+|+.+.+.+|
T Consensus 328 ~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~ 367 (394)
T 4gt6_A 328 DAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGS 367 (394)
T ss_dssp TTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSC
T ss_pred hHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCc
Confidence 88888899999888654 66655667777778887777665
|
| >3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A | Back alignment and structure |
|---|
Probab=96.23 E-value=0.00075 Score=59.36 Aligned_cols=13 Identities=15% Similarity=0.089 Sum_probs=8.0
Q ss_pred CcCeEeCccCccc
Q 045127 76 KITPLYLSFNFFW 88 (508)
Q Consensus 76 ~L~~L~L~~N~l~ 88 (508)
+|+.|||+++.|+
T Consensus 62 ~L~~LDLs~~~It 74 (176)
T 3e4g_A 62 KIQAIDATDSCIM 74 (176)
T ss_dssp CEEEEEEESCCCC
T ss_pred eEeEEeCcCCCcc
Confidence 5666666666654
|
| >3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A | Back alignment and structure |
|---|
Probab=95.86 E-value=0.0018 Score=56.86 Aligned_cols=82 Identities=10% Similarity=0.077 Sum_probs=47.8
Q ss_pred cccEEEcccCcccCCCChhhhccCCcccccccccc-ccCcCCchhhhcC----Cccceeccccc-cccCccccccccccc
Q 045127 94 GIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQ-LSGDIPVESFSVL----ANLTFLNLSYN-HFSEMKVSDTKFFQR 167 (508)
Q Consensus 94 ~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~-l~g~lp~~~~~~l----~~L~~l~l~~N-~l~~~~~~~~~~l~~ 167 (508)
.|+.|||+++.++..--..+.++++|+.|+|++|. +++.-= ..++.+ ++|+.|+|+++ +++..-......+++
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL-~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCL-ERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHH-HHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHH-HHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 35777777777765444556677777777777774 552211 223332 35777777775 366433334445666
Q ss_pred cCCCCccCC
Q 045127 168 FNSSSFLHS 176 (508)
Q Consensus 168 l~~~~~~~n 176 (508)
|+.+++.+-
T Consensus 141 L~~L~L~~c 149 (176)
T 3e4g_A 141 LKYLFLSDL 149 (176)
T ss_dssp CCEEEEESC
T ss_pred CCEEECCCC
Confidence 666666553
|
| >3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum} | Back alignment and structure |
|---|
Probab=95.66 E-value=0.0073 Score=61.09 Aligned_cols=149 Identities=10% Similarity=0.066 Sum_probs=90.6
Q ss_pred ceeeecCCeEEEEEEECC--------CCEEEEEEecCCCCHHHHHHHHHHHHHHhhcC-CCCccceeeEEecCCeeEEEE
Q 045127 244 NLVGKNEGAAIYKGILRD--------GTRVKIEIYKGDVSREIRDEFVEECKLLVQFQ-HKNLIRVLGWNNSRRTRAIVT 314 (508)
Q Consensus 244 ~~lg~G~~g~V~~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~ 314 (508)
+.+..|-...+|+....+ +..+++|+..... . ..-+..+|..+++.+. +.-..++++.+. -+.||
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t-~-~~idR~~E~~~l~~L~~~gi~P~l~~~~~----~~~I~ 149 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV-G-KFYDSKVELDVFRYLSNINIAPNIIADFP----EGRIE 149 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC---CCCCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEE
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc-c-hhcCHHHHHHHHHHHHhcCCCCCEEEEcC----CCEEE
Confidence 567788889999998753 5789999874322 1 1122357888887774 333455665432 27899
Q ss_pred eecCCCCHHH--------------Hhc--------c-------CCC--CHHHHHHHHHHH-------------------H
Q 045127 315 EWTNGGNVEL--------------WLS--------E-------SAP--SWKHRLKVLIGV-------------------V 344 (508)
Q Consensus 315 e~~~~gsL~~--------------~l~--------~-------~~l--~~~~~~~i~~~i-------------------~ 344 (508)
||++|.+|.. .+. . ..- -+.++.++..++ .
T Consensus 150 efI~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~ 229 (424)
T 3mes_A 150 EFIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKELYSKIL 229 (424)
T ss_dssp ECCCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHHHHHHH
T ss_pred EEeCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhccccHHHHH
Confidence 9999865321 000 1 111 134444443322 1
Q ss_pred HHHHHHh--------------------h---CCCccccCCCCCCEEecCCCceEEeeccCCCCCCCcchhhHHHHHHHHH
Q 045127 345 EAMCYLQ--------------------E---QWPEVDYDLRTGSVLLTDNLEPLISRFKIEYQHRSTKYVYKFGLFLLEM 401 (508)
Q Consensus 345 ~~L~~LH--------------------~---~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~Dv~SlGvil~el 401 (508)
..+.+|. . ...++|+|+.+.||+ +.++.+.++||..+....+. |-+|..+.+.
T Consensus 230 ~e~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~~~~~---~Dla~~~~~~ 305 (424)
T 3mes_A 230 EEIDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSAINFAG---ADIANYFCEY 305 (424)
T ss_dssp HHHHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCEEEEHH---HHHHHHHHTT
T ss_pred HHHHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCCcCChH---HHHHHHHHHH
Confidence 2223322 1 116789999999999 88889999999887655544 4457666666
Q ss_pred H
Q 045127 402 I 402 (508)
Q Consensus 402 l 402 (508)
.
T Consensus 306 ~ 306 (424)
T 3mes_A 306 I 306 (424)
T ss_dssp T
T ss_pred H
Confidence 5
|
| >2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A | Back alignment and structure |
|---|
Probab=95.54 E-value=0.17 Score=45.72 Aligned_cols=88 Identities=7% Similarity=-0.038 Sum_probs=61.6
Q ss_pred CCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccC--------CC-----C
Q 045127 320 GNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKI--------EY-----Q 384 (508)
Q Consensus 320 gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~--------~~-----~ 384 (508)
-+|.+.+. +.++++++++.++.|.+.+|.-+-....-..+=+.|..|++..+|.+...+=.. +. .
T Consensus 33 vSL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~dG~V~f~~~~s~~~~~~~~~pe~~~~~ 112 (229)
T 2yle_A 33 LSLEEILRLYNQPINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRDGAVTLAPAADDAGEPPPVAGKLGYSQ 112 (229)
T ss_dssp EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETTSCEEECCC------------CCSSSS
T ss_pred ccHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecCCceecccccccccccCCCChhhcccc
Confidence 37889888 899999999999999999988772210111222346899999999988764211 00 1
Q ss_pred CCCcchhhHHHHHHHHHHhCCCC
Q 045127 385 HRSTKYVYKFGLFLLEMITNRRP 407 (508)
Q Consensus 385 ~~~~~Dv~SlGvil~elltg~~P 407 (508)
.+.+.=|||+|+++|.-+-=..|
T Consensus 113 ~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 113 CMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp SCHHHHHHHHHHHHHHHHTTTCC
T ss_pred chHHHHHHHHHHHHHHHhhcCCC
Confidence 13555699999999998864444
|
| >4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165} | Back alignment and structure |
|---|
Probab=95.47 E-value=0.015 Score=58.25 Aligned_cols=105 Identities=14% Similarity=0.157 Sum_probs=74.3
Q ss_pred cccCCCccccCCCCCcCeEeCccCcccccCC------ccccEEEcccCcccCCCChhhhccCCccccccccccccCcCCc
Q 045127 62 CVESFPKIDLRSRPKITPLYLSFNFFWKYCP------LGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPV 135 (508)
Q Consensus 62 ~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p------~~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp~ 135 (508)
.+.+|+...|.++++|+.+.+.. .++..-. ..|+.++|..| ++.+-..+|.+|.+|+.+.+..+ ++ .|+.
T Consensus 275 ~~~~I~~~aF~~c~~L~~i~l~~-~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~-~I~~ 350 (394)
T 4gt6_A 275 SVVSIGTGAFMNCPALQDIEFSS-RITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VT-KIPE 350 (394)
T ss_dssp TCCEECTTTTTTCTTCCEEECCT-TCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CC-BCCG
T ss_pred ccceecCcccccccccccccCCC-cccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cC-EEhH
Confidence 44567777899999999999964 4443222 34689999865 66566789999999999999755 77 8888
Q ss_pred hhhhcCCccceeccccccccCccccccccccccCCCCc
Q 045127 136 ESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSF 173 (508)
Q Consensus 136 ~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~ 173 (508)
.+|.++++|+.+++.+|.... ..+.....|+.+.+
T Consensus 351 ~aF~~C~~L~~i~~~~~~~~~---~~~~~~~~L~~i~i 385 (394)
T 4gt6_A 351 SAFSNCTALNNIEYSGSRSQW---NAISTDSGLQNLPV 385 (394)
T ss_dssp GGGTTCTTCCEEEESSCHHHH---HTCBCCCCC-----
T ss_pred hHhhCCCCCCEEEECCceeeh---hhhhccCCCCEEEe
Confidence 899999999999999876542 22333444444443
|
| >4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum} | Back alignment and structure |
|---|
Probab=95.39 E-value=0.019 Score=56.90 Aligned_cols=91 Identities=14% Similarity=0.170 Sum_probs=72.7
Q ss_pred cccCCCccccCCCCCcCeEeCccCcccccCC------ccccEEEcccCcccCCCChhhhccCCccccccccccccCcCCc
Q 045127 62 CVESFPKIDLRSRPKITPLYLSFNFFWKYCP------LGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPV 135 (508)
Q Consensus 62 ~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p------~~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp~ 135 (508)
.+..|+...|.++.+|+.+.+..+ +...-. ..|+.+.+.+|.++.+-..+|.+|.+|+.++|..+ ++ .|+.
T Consensus 250 ~v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~-~I~~ 326 (379)
T 4h09_A 250 NVTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LK-TIQV 326 (379)
T ss_dssp TCCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CC-EECT
T ss_pred CccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-cc-EEHH
Confidence 466777778999999999999755 332111 35689999999998777889999999999999865 77 8887
Q ss_pred hhhhcCCccceeccccccccC
Q 045127 136 ESFSVLANLTFLNLSYNHFSE 156 (508)
Q Consensus 136 ~~~~~l~~L~~l~l~~N~l~~ 156 (508)
.+|.++.+|+.+.+..| ++.
T Consensus 327 ~aF~~C~~L~~i~ip~~-v~~ 346 (379)
T 4h09_A 327 YAFKNCKALSTISYPKS-ITL 346 (379)
T ss_dssp TTTTTCTTCCCCCCCTT-CCE
T ss_pred HHhhCCCCCCEEEECCc-cCE
Confidence 89999999999998755 554
|
| >4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=95.31 E-value=0.014 Score=58.46 Aligned_cols=83 Identities=18% Similarity=0.185 Sum_probs=64.0
Q ss_pred CCccccCCCCCcCeEeCccCcccccCC------ccccEEEcccCcccCCCChhhhccCCccccccccccccCcCCchhhh
Q 045127 66 FPKIDLRSRPKITPLYLSFNFFWKYCP------LGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFS 139 (508)
Q Consensus 66 ~p~~~~~~l~~L~~L~L~~N~l~~~~p------~~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp~~~~~ 139 (508)
++...|..+.+|+.+.+..+ ++..-. ..|+.++|.++ ++.+-..+|.+|.+|+.+++..| ++ .|+..+|.
T Consensus 288 i~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~ 363 (394)
T 4fs7_A 288 VPEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LR-KIGANAFQ 363 (394)
T ss_dssp ECTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CC-EECTTTBT
T ss_pred eccccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-cc-EehHHHhh
Confidence 45556777788888887655 332212 34588999755 77666889999999999999887 77 88888999
Q ss_pred cCCccceeccccc
Q 045127 140 VLANLTFLNLSYN 152 (508)
Q Consensus 140 ~l~~L~~l~l~~N 152 (508)
++.+|+.+++..|
T Consensus 364 ~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 364 GCINLKKVELPKR 376 (394)
T ss_dssp TCTTCCEEEEEGG
T ss_pred CCCCCCEEEECCC
Confidence 9999999999765
|
| >1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=95.11 E-value=0.0055 Score=54.87 Aligned_cols=81 Identities=11% Similarity=0.085 Sum_probs=53.3
Q ss_pred cCCCCCcCeEeCccC-ccccc----------CCccccEEEcccCcccCC----CChhhhccCCccccccccccccCc---
Q 045127 71 LRSRPKITPLYLSFN-FFWKY----------CPLGIMSIDLSNNSLKGA----FPIDVLLCTQIQALDLSYNQLSGD--- 132 (508)
Q Consensus 71 ~~~l~~L~~L~L~~N-~l~~~----------~p~~l~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~g~--- 132 (508)
+.+-+.|+.|+|++| +|... .-..++.|+|++|+|... +...+..-+.|+.|+|++|+|++.
T Consensus 37 l~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ 116 (197)
T 1pgv_A 37 REDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLA 116 (197)
T ss_dssp HTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHH
T ss_pred HhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHH
Confidence 344567888999885 76521 013458899999988732 233444567889999999998732
Q ss_pred -CCchhhhcCCccceeccccc
Q 045127 133 -IPVESFSVLANLTFLNLSYN 152 (508)
Q Consensus 133 -lp~~~~~~l~~L~~l~l~~N 152 (508)
|- ..+..-++|+.|+|++|
T Consensus 117 ala-~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 117 RLL-RSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp HHH-HHTTTTCCCSEEECCCC
T ss_pred HHH-HHHhhCCceeEEECCCC
Confidence 22 23444467889999865
|
| >1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=94.66 E-value=0.0045 Score=55.46 Aligned_cols=85 Identities=12% Similarity=0.125 Sum_probs=58.8
Q ss_pred ccCCCCCcCeEeCccCcccccC----------CccccEEEcccCcccCCCC----hhhhccCCcccccccccc---ccC-
Q 045127 70 DLRSRPKITPLYLSFNFFWKYC----------PLGIMSIDLSNNSLKGAFP----IDVLLCTQIQALDLSYNQ---LSG- 131 (508)
Q Consensus 70 ~~~~l~~L~~L~L~~N~l~~~~----------p~~l~~L~Ls~N~l~~~~p----~~~~~l~~L~~L~l~~N~---l~g- 131 (508)
.+..-+.|+.|+|++|+|...- -..|++|+|+.|+|...-- .++..-+.|+.|+|++|. +..
T Consensus 65 aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~ 144 (197)
T 1pgv_A 65 AACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQ 144 (197)
T ss_dssp HHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHH
T ss_pred HHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHH
Confidence 4666689999999999997321 1456999999999984322 233445679999999763 331
Q ss_pred ---cCCchhhhcCCccceecccccccc
Q 045127 132 ---DIPVESFSVLANLTFLNLSYNHFS 155 (508)
Q Consensus 132 ---~lp~~~~~~l~~L~~l~l~~N~l~ 155 (508)
.|- ..+..-++|+.|+++.|...
T Consensus 145 g~~~ia-~aL~~N~tL~~L~l~~~~~g 170 (197)
T 1pgv_A 145 VEMDMM-MAIEENESLLRVGISFASME 170 (197)
T ss_dssp HHHHHH-HHHHHCSSCCEEECCCCCHH
T ss_pred HHHHHH-HHHHhCCCcCeEeccCCCcc
Confidence 132 34555678888888876544
|
| >3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A* | Back alignment and structure |
|---|
Probab=94.27 E-value=0.0071 Score=60.86 Aligned_cols=44 Identities=16% Similarity=0.231 Sum_probs=34.8
Q ss_pred ccccCCCCCCEEe------cCCCceEEeeccCCCCCCCcchhhHHHHHHHHHH
Q 045127 356 EVDYDLRTGSVLL------TDNLEPLISRFKIEYQHRSTKYVYKFGLFLLEMI 402 (508)
Q Consensus 356 iiH~Dlkp~NIll------~~~~~~kl~Dfg~~~~~~~~~Dv~SlGvil~ell 402 (508)
++|+|+.+.||++ +++..++++||-.+....+..| +|..+.|..
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~n~~~fD---lan~f~ew~ 295 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSYNYRGFD---IGNHFCEWM 295 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEEEEHHHH---HHHHHHHTT
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccCCCchHh---HHHHHHHHh
Confidence 5799999999999 4567799999988876666555 577777765
|
| >4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=92.66 E-value=0.22 Score=44.90 Aligned_cols=116 Identities=9% Similarity=0.141 Sum_probs=84.1
Q ss_pred CCCCccceeeEEecCCeeEEEEeecCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCC
Q 045127 293 QHKNLIRVLGWNNSRRTRAIVTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNL 372 (508)
Q Consensus 293 ~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~ 372 (508)
.||+.+.. .+-.+.+.+.+.++.-+ +...+-.-...+...+++++.+|+....+++.. +|--+.|+||+++.++
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~--~~~~f~~ik~~~~~eKlr~l~ni~~l~~~~~~r---~tf~L~P~NL~f~~~~ 116 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDIND--NHTPFDNIKSFTKNEKLRYLLNIKNLEEVNRTR---YTFVLAPDELFFTRDG 116 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCT--TSEEGGGGGGSCHHHHHHHHHHGGGGGGGGGSS---EECCCSGGGEEECTTS
T ss_pred cCCcccce-EEEEcccEEEEEEEcCc--ccCCHHHHHhcCHHHHHHHHHHHHHHHHHhcCc---eEEEEecceEEEcCCC
Confidence 58888866 45566666655555443 233333334678899999999999888666655 7888999999999999
Q ss_pred ceEEeeccCCCCCCCc----ch-hhHHHHHHHHHHhCCCCCcccccC
Q 045127 373 EPLISRFKIEYQHRST----KY-VYKFGLFLLEMITNRRPLEEFERG 414 (508)
Q Consensus 373 ~~kl~Dfg~~~~~~~~----~D-v~SlGvil~elltg~~P~~~~~~~ 414 (508)
.+++.-.|......+- .| .-.+=+++..+++++..|+..-.+
T Consensus 117 ~p~i~~RGik~~l~P~~~~ee~fL~qyKAliiall~~K~~Fe~l~~G 163 (215)
T 4ann_A 117 LPIAKTRGLQNVVDPLPVSEAEFLTRYKALVICAFNEKQSFDALVEG 163 (215)
T ss_dssp CEEESCCEETTTBSCCCCCHHHHHHHHHHHHHHHHCTTCCHHHHHHS
T ss_pred CEEEEEccCccCCCCCCCCHHHHHHHHHHHHHHHHcCCCCHHHHHcC
Confidence 9999999875443332 23 456889999999999998765433
|
| >4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid} | Back alignment and structure |
|---|
Probab=90.07 E-value=1 Score=40.56 Aligned_cols=111 Identities=10% Similarity=0.093 Sum_probs=79.8
Q ss_pred CCCCccceeeEEecCCeeEEEEeecCCCCHHHHhccCCCCHHHHHHHHHHHHHHHH-HHhhCCCccccCCCCCCEEecCC
Q 045127 293 QHKNLIRVLGWNNSRRTRAIVTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMC-YLQEQWPEVDYDLRTGSVLLTDN 371 (508)
Q Consensus 293 ~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~-~LH~~~~iiH~Dlkp~NIll~~~ 371 (508)
.||++ -..+-.+++.+.+.++.-+++.=...+ ..++..++++++.+|+.... +++.. +|--+.|+||++|.+
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i--~~~~~~eKlrll~nl~~L~~~~~~~r---~tf~l~P~NL~f~~~ 120 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAI--RKTTLLSRIRAAIHLVSKVKHHSARR---LIFIVCPENLMFNRA 120 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHH--HTSCHHHHHHHHHHHHHHHSSCCSSS---EECCCCGGGEEECTT
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHH--HhcCHHHHHHHHHHHHHHHHHhhhCc---eeEEEeCceEEEeCC
Confidence 57877 444556677777767655343222233 46788899999999888766 55544 788899999999999
Q ss_pred CceEEeeccCCCCCCC----cch-hhHHHHHHHHHHhCCCCCcc
Q 045127 372 LEPLISRFKIEYQHRS----TKY-VYKFGLFLLEMITNRRPLEE 410 (508)
Q Consensus 372 ~~~kl~Dfg~~~~~~~----~~D-v~SlGvil~elltg~~P~~~ 410 (508)
+.+++.-.|......+ ..| .-.+=+++..++.++..|++
T Consensus 121 ~~p~i~hRGi~~~lpP~e~~ee~fl~qyKali~all~~K~~Fe~ 164 (219)
T 4ano_A 121 LEPFFLHVGVKESLPPDEWDDERLLREVKATVLALTEGEYRFDE 164 (219)
T ss_dssp CCEEESCCEETTTBSSCSCCHHHHHHHHHHHHHHHTTCSSCHHH
T ss_pred CcEEEEEcCCcccCCCCCCCHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 9999999987543322 223 45688888899999988864
|
| >3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A | Back alignment and structure |
|---|
Probab=83.30 E-value=0.15 Score=52.14 Aligned_cols=61 Identities=13% Similarity=0.015 Sum_probs=17.9
Q ss_pred CCceeeecCCeEEEEEEECC-CCEEEE------EEecCCC-CHHHHHHHHHHHHHHhhcCCCCccceeeEEe
Q 045127 242 KKNLVGKNEGAAIYKGILRD-GTRVKI------EIYKGDV-SREIRDEFVEECKLLVQFQHKNLIRVLGWNN 305 (508)
Q Consensus 242 ~~~~lg~G~~g~V~~~~~~~-~~~vav------K~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 305 (508)
..+.+| ||.||+|.+.. ..+||| |..+... ..+....+.+|..+++..+|||+++.+++..
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 345666 99999999853 467888 7665432 2334567888999999999999999988765
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 508 | ||||
| d1s9ja_ | 322 | d.144.1.7 (A:) Dual specificity mitogen-activated | 6e-20 | |
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 5e-19 | |
| d1jpaa_ | 299 | d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou | 6e-18 | |
| d1qpca_ | 272 | d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom | 2e-16 | |
| d1k2pa_ | 258 | d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum | 7e-16 | |
| d1sm2a_ | 263 | d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu | 9e-16 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 1e-15 | |
| d1vjya_ | 303 | d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human | 2e-15 | |
| d1mqba_ | 283 | d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum | 5e-15 | |
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 3e-14 | |
| d1opja_ | 287 | d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou | 4e-14 | |
| d1fmka3 | 285 | d.144.1.7 (A:249-533) c-src tyrosine kinase {Human | 5e-14 | |
| d1t4ha_ | 270 | d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa | 9e-14 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 2e-13 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 3e-13 | |
| d1fvra_ | 309 | d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [ | 3e-13 | |
| d1u59a_ | 285 | d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum | 4e-13 | |
| d1xkka_ | 317 | d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb- | 4e-13 | |
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 2e-12 | |
| d1xbba_ | 277 | d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human | 4e-12 | |
| d1nvra_ | 271 | d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 { | 6e-12 | |
| d1p4oa_ | 308 | d.144.1.7 (A:) Insulin-like growth factor 1 recept | 7e-12 | |
| d1r0pa_ | 311 | d.144.1.7 (A:) Hepatocyte growth factor receptor, | 4e-11 | |
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 6e-11 | |
| d1o6ya_ | 277 | d.144.1.7 (A:) Mycobacterial protein kinase PknB, | 6e-11 | |
| d1a06a_ | 307 | d.144.1.7 (A:) Calmodulin-dependent protein kinase | 7e-11 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 1e-10 | |
| d1mp8a_ | 273 | d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma | 2e-10 | |
| d1t46a_ | 311 | d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens | 3e-10 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 3e-10 | |
| d1u46a_ | 273 | d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum | 4e-10 | |
| d1rjba_ | 325 | d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s | 7e-10 | |
| d1omwa3 | 364 | d.144.1.7 (A:186-549) G-protein coupled receptor k | 9e-10 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 3e-09 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 2e-05 | |
| d1ua2a_ | 299 | d.144.1.7 (A:) Cell division protein kinase 7, CDK | 4e-09 | |
| d1tkia_ | 321 | d.144.1.7 (A:) Titin, kinase domain {Human (Homo s | 5e-09 | |
| d1xjda_ | 320 | d.144.1.7 (A:) Protein kinase C, theta type {Human | 7e-09 | |
| d1ywna1 | 299 | d.144.1.7 (A:818-1166) Vascular endothelial growth | 7e-09 | |
| d1pmea_ | 345 | d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien | 8e-09 | |
| d1fgka_ | 299 | d.144.1.7 (A:) Fibroblast growth factor receptor 1 | 9e-09 | |
| d1ob3a_ | 286 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod | 2e-08 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 2e-08 | |
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 3e-08 | |
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 9e-08 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 9e-08 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 8e-07 | |
| d1fota_ | 316 | d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni | 1e-07 | |
| d1gz8a_ | 298 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H | 3e-07 | |
| d1unla_ | 292 | d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H | 5e-07 | |
| d1o6la_ | 337 | d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap | 2e-06 | |
| d1q5ka_ | 350 | d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs | 2e-06 | |
| d1jksa_ | 293 | d.144.1.7 (A:) Death-associated protein kinase, Da | 5e-06 | |
| d1rdqe_ | 350 | d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni | 7e-06 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 8e-06 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 0.004 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 3e-05 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 0.004 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 2e-04 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 3e-04 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 5e-04 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 8e-04 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 3e-04 | |
| d2gfsa1 | 348 | d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa | 4e-04 | |
| d2ifga3 | 156 | c.10.2.7 (A:36-191) High affinity nerve growth fac | 0.001 | |
| d2ca6a1 | 344 | c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal dom | 0.001 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 0.003 |
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 88.2 bits (218), Expect = 6e-20
Identities = 39/219 (17%), Positives = 90/219 (41%), Gaps = 27/219 (12%)
Query: 233 LKAATNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSREIRDEFVEECKLLVQ 291
++ + F K + +G G ++K + G + ++ ++ IR++ + E ++L +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 292 FQHKNLIRVLGWNNSRRTRAIVTEWTNGGNVELWLSESAP-SWKHRLKVLIGVVEAMCYL 350
++ G S +I E +GG+++ L ++ + KV I V++ + YL
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYL 120
Query: 351 QEQWPEVDYDLRTGSVLLTDNLEPLISRF----------------KIEY----QHRSTKY 390
+E+ + D++ ++L+ E + F Y + + T Y
Sbjct: 121 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHY 180
Query: 391 -----VYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRM 424
++ GL L+EM R P+ + E + ++
Sbjct: 181 SVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQV 219
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 85.0 bits (210), Expect = 5e-19
Identities = 50/279 (17%), Positives = 96/279 (34%), Gaps = 47/279 (16%)
Query: 240 FSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIR 299
+ +G +YKG VK+ + + + F E +L + +H N++
Sbjct: 10 ITVGQRIGSGSFGTVYKGKWHGDVAVKM-LNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 68
Query: 300 VLGWNNSRRTRAIVTEWTNGGNVELWL--SESAPSWKHRLKVLIGVVEAMCYLQEQWPEV 357
+G++ + + AIVT+W G ++ L E+ + + + M YL + +
Sbjct: 69 FMGYSTAPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK-SII 126
Query: 358 DYDLRTGSVLLTDNLEPLISRF-------KIEYQHRSTKY-------------------- 390
DL++ ++ L ++L I F + H+ +
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 186
Query: 391 -----VYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMF 445
VY FG+ L E++T + P + R + +L V + M
Sbjct: 187 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSN---CPKAMK 243
Query: 446 DQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSCP 484
L C + + P QI I +S P
Sbjct: 244 R-------LMAECLKKKRDERPLFPQILASIELLARSLP 275
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 82.1 bits (202), Expect = 6e-18
Identities = 53/298 (17%), Positives = 106/298 (35%), Gaps = 64/298 (21%)
Query: 233 LKAATNGFSKK---------NLVGKNEGAAIYKGILRDGTR----VKIEIYKGDVSREIR 279
A F+K+ ++G E + G L+ + V I+ K + + R
Sbjct: 12 PNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQR 71
Query: 280 DEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWTNGGNVELWLSESAP--SWKHRL 337
+F+ E ++ QF H N+I + G I+TE+ G+++ +L ++ + +
Sbjct: 72 RDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLV 131
Query: 338 KVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKI---------------- 381
+L G+ M YL + V DL ++L+ NL +S F +
Sbjct: 132 GMLRGIAAGMKYLADMNY-VHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSA 190
Query: 382 -----------EYQHRSTKY-----VYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMH 425
+ K+ V+ +G+ + E+++ Y M
Sbjct: 191 LGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP------------YWDMT 238
Query: 426 YPENLQLVV-DERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKS 482
+ + + D R+ + Q L L C + P QI N + + ++
Sbjct: 239 NQDVINAIEQDYRLPPPMDCPSALHQ---LMLDCWQKDRNHRPKFGQIVNTLDKMIRN 293
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Score = 77.0 bits (189), Expect = 2e-16
Identities = 51/269 (18%), Positives = 104/269 (38%), Gaps = 51/269 (18%)
Query: 240 FSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIR 299
+G + ++ G T+V ++ K D F+ E L+ Q QH+ L+R
Sbjct: 15 LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK--QGSMSPDAFLAEANLMKQLQHQRLVR 72
Query: 300 VLGWNNSRRTRAIVTEWTNGGNVELWLSESAP---SWKHRLKVLIGVVEAMCYLQEQWPE 356
+ ++ I+TE+ G++ +L + + L + + E M +++E+
Sbjct: 73 LYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER-NY 130
Query: 357 VDYDLRTGSVLLTDNLEPLISRFKIEYQHRSTKY-------------------------- 390
+ DLR ++L++D L I+ F + +Y
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 391 --VYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVV-DERMMLTENMFDQ 447
V+ FG+ L E++T+ R Y M PE +Q + RM+ +N ++
Sbjct: 191 SDVWSFGILLTEIVTHGRIP------------YPGMTNPEVIQNLERGYRMVRPDNCPEE 238
Query: 448 AEQGLGLGLMCTDQPTGKLPSLVQIYNMI 476
Q L +C + P+ + +++
Sbjct: 239 LYQ---LMRLCWKERPEDRPTFDYLRSVL 264
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 75.5 bits (185), Expect = 7e-16
Identities = 45/268 (16%), Positives = 92/268 (34%), Gaps = 49/268 (18%)
Query: 240 FSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIR 299
+ +G + + G R V I++ K DEF+EE K+++ H+ L++
Sbjct: 6 LTFLKELGTGQFGVVKYGKWRGQYDVAIKMIK--EGSMSEDEFIEEAKVMMNLSHEKLVQ 63
Query: 300 VLGWNNSRRTRAIVTEWTNGGNVE--LWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEV 357
+ G +R I+TE+ G + L + L++ V EAM YL+ + +
Sbjct: 64 LYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK-QFL 122
Query: 358 DYDLRTGSVLLTDNLEPLISRFKIEYQHRSTKY--------------------------- 390
DL + L+ D +S F + +Y
Sbjct: 123 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 182
Query: 391 -VYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVD-ERMMLTENMFDQA 448
++ FG+ + E+ + + Y R E + + R+ ++
Sbjct: 183 DIWAFGVLMWEIYSLGKMP------------YERFTNSETAEHIAQGLRLYRPHLASEKV 230
Query: 449 EQGLGLGLMCTDQPTGKLPSLVQIYNMI 476
+ C + + P+ + + I
Sbjct: 231 YT---IMYSCWHEKADERPTFKILLSNI 255
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Score = 75.1 bits (184), Expect = 9e-16
Identities = 41/273 (15%), Positives = 95/273 (34%), Gaps = 47/273 (17%)
Query: 240 FSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIR 299
+ +G + ++ G + +V I+ + ++F+EE +++++ H L++
Sbjct: 7 LTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIR--EGAMSEEDFIEEAEVMMKLSHPKLVQ 64
Query: 300 VLGWNNSRRTRAIVTEWTNGGNVELWLSESA--PSWKHRLKVLIGVVEAMCYLQEQWPEV 357
+ G + +V E+ G + +L + + L + + V E M YL+E +
Sbjct: 65 LYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACV-I 123
Query: 358 DYDLRTGSVLLTDNLEPLISRFKIEYQHRSTKY--------------------------- 390
DL + L+ +N +S F + +Y
Sbjct: 124 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 183
Query: 391 -VYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQAE 449
V+ FG+ + E+ + + E R + +E I + R+
Sbjct: 184 DVWSFGVLMWEVFSEGKIPYE-NRSNSEVVEDISTGF----------RLYKPRLASTHVY 232
Query: 450 QGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKS 482
Q + C + P+ ++ + +S
Sbjct: 233 Q---IMNHCWKERPEDRPAFSRLLRQLAEIAES 262
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 75.4 bits (185), Expect = 1e-15
Identities = 40/241 (16%), Positives = 75/241 (31%), Gaps = 40/241 (16%)
Query: 240 FSKKNLVGKNEGAAIYKGILRDGTR---VKIEIYKGDVSREIRDEFVEECKLLVQFQHKN 296
FS +G A+Y + +K Y G S E + ++E + L + +H N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 297 LIRVLGWNNSRRTRAIVTEWTNGGNVELWLSESAP-SWKHRLKVLIGVVEAMCYLQEQWP 355
I+ G T +V E+ G +L P V G ++ + YL
Sbjct: 77 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNM 136
Query: 356 EVDYDLRTGSVLLTDNLEPLISRFKIEYQHRSTKY------------------------- 390
+ D++ G++LL++ + F
Sbjct: 137 -IHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFVGTPYWMAPEVILAMDEGQYDGKV 195
Query: 391 -VYKFGLFLLEMITNRRPLEE-------FERGEAGFIEYIRMHYPENLQLVVDERMMLTE 442
V+ G+ +E+ + PL + + H+ E + V L +
Sbjct: 196 DVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFV--DSCLQK 253
Query: 443 N 443
Sbjct: 254 I 254
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Score = 74.5 bits (182), Expect = 2e-15
Identities = 39/291 (13%), Positives = 97/291 (33%), Gaps = 59/291 (20%)
Query: 243 KNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVE-ECKLLVQFQHKNLIRVL 301
+ +GK +++G R G V ++I+ SRE R F E E V +H+N++ +
Sbjct: 8 QESIGKGRFGEVWRGKWR-GEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFI 63
Query: 302 GW----NNSRRTRAIVTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPE- 356
N + +V+++ G++ +L+ + + +K+ + + +L +
Sbjct: 64 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGT 123
Query: 357 ------VDYDLRTGSVLLTDNLEPLISRFKIEYQHRSTK--------------------- 389
DL++ ++L+ N I+ + +H S
Sbjct: 124 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEV 183
Query: 390 ----------------YVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHY--PENLQ 431
+Y GL E+ E + + + + E +
Sbjct: 184 LDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRK 243
Query: 432 LVVDERMMLT----ENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITR 478
+V ++++ + + C + ++I +++
Sbjct: 244 VVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQ 294
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 73.3 bits (179), Expect = 5e-15
Identities = 55/295 (18%), Positives = 110/295 (37%), Gaps = 58/295 (19%)
Query: 240 FSKKNLVGKNEGAAIYKGILRDGTR-----VKIEIYKGDVSREIRDEFVEECKLLVQFQH 294
+++ ++G E +YKG+L+ + V I+ K + + R +F+ E ++ QF H
Sbjct: 9 VTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSH 68
Query: 295 KNLIRVLGWNNSRRTRAIVTEWTNGGNVELWLSESAP--SWKHRLKVLIGVVEAMCYLQE 352
N+IR+ G + + I+TE+ G ++ +L E S + +L G+ M YL
Sbjct: 69 HNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLAN 128
Query: 353 QWPEVDYDLRTGSVLLTDNLEPLIS------RFKIEYQHRSTKY---------------- 390
V DL ++L+ NL +S + + + T
Sbjct: 129 M-NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISY 187
Query: 391 --------VYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTE 442
V+ FG+ + E++T + +++ L
Sbjct: 188 RKFTSASDVWSFGIVMWEVMTYGER-------------PYWELSNHEVMKAINDGFRLPT 234
Query: 443 NMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSCPILTSENHRKSHAD 497
M D L + C Q + P I +++ + ++ + + K+ AD
Sbjct: 235 PM-DCPSAIYQLMMQCWQQERARRPKFADIVSILDK------LIRAPDSLKTLAD 282
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 70.8 bits (173), Expect = 3e-14
Identities = 55/266 (20%), Positives = 99/266 (37%), Gaps = 49/266 (18%)
Query: 240 FSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIR 299
+GK E + G R G +V ++ K D + + F+ E ++ Q +H NL++
Sbjct: 9 LKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQ---AFLAEASVMTQLRHSNLVQ 64
Query: 300 VLG-WNNSRRTRAIVTEWTNGGNVELWLSE---SAPSWKHRLKVLIGVVEAMCYLQEQWP 355
+LG + IVTE+ G++ +L S LK + V EAM YL+
Sbjct: 65 LLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN-N 123
Query: 356 EVDYDLRTGSVLLTDNLEPLISRFKIEYQHRSTKY------------------------V 391
V DL +VL++++ +S F + + ST+ V
Sbjct: 124 FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDV 183
Query: 392 YKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVV-DERMMLTENMFDQAEQ 450
+ FG+ L E+ + R Y R+ + + V +M + +
Sbjct: 184 WSFGILLWEIYSFGRVP------------YPRIPLKDVVPRVEKGYKMDAPDGCPPAVYE 231
Query: 451 GLGLGLMCTDQPTGKLPSLVQIYNMI 476
+ C PS +Q+ +
Sbjct: 232 ---VMKNCWHLDAAMRPSFLQLREQL 254
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 70.5 bits (172), Expect = 4e-14
Identities = 53/278 (19%), Positives = 100/278 (35%), Gaps = 49/278 (17%)
Query: 240 FSKKNLVGKNEGAAIYKGILRD-GTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLI 298
+ K+ +G + +Y+G+ + V ++ K D +EF++E ++ + +H NL+
Sbjct: 19 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED--TMEVEEFLKEAAVMKEIKHPNLV 76
Query: 299 RVLGWNNSRRTRAIVTEWTNGGNVELWLSESAP---SWKHRLKVLIGVVEAMCYLQEQWP 355
++LG I+TE+ GN+ +L E S L + + AM YL+++
Sbjct: 77 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK-N 135
Query: 356 EVDYDLRTGSVLLTDNLEPLISRF---------------------------KIEYQHRST 388
+ DL + L+ +N ++ F + Y S
Sbjct: 136 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 195
Query: 389 K-YVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQ 447
K V+ FG+ L E+ T E + Y RM E ++
Sbjct: 196 KSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDY----------RMERPEGCPEK 244
Query: 448 AEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSCPI 485
+ L C PS +I+ ++ I
Sbjct: 245 VYE---LMRACWQWNPSDRPSFAEIHQAFETMFQESSI 279
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 70.1 bits (171), Expect = 5e-14
Identities = 41/242 (16%), Positives = 89/242 (36%), Gaps = 44/242 (18%)
Query: 240 FSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIR 299
+ +G+ ++ G TRV I+ K + F++E +++ + +H+ L++
Sbjct: 19 LRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK--PGTMSPEAFLQEAQVMKKLRHEKLVQ 76
Query: 300 VLGWNNSRRTRAIVTEWTNGGNVELWL---SESAPSWKHRLKVLIGVVEAMCYLQEQWPE 356
+ S IVTE+ + G++ +L + + + + M Y++
Sbjct: 77 LYAV-VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY- 134
Query: 357 VDYDLRTGSVLLTDNLEPLISRFKI-----------------------EYQHRSTKY--- 390
V DLR ++L+ +NL ++ F + ++
Sbjct: 135 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 194
Query: 391 --VYKFGLFLLEMITNRRP-------LEEFERGEAGFIEYIRMHYPENLQLVVDERMMLT 441
V+ FG+ L E+ T R E ++ E G+ PE+L ++
Sbjct: 195 SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLM--CQCWR 252
Query: 442 EN 443
+
Sbjct: 253 KE 254
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 69.2 bits (169), Expect = 9e-14
Identities = 39/226 (17%), Positives = 80/226 (35%), Gaps = 33/226 (14%)
Query: 246 VGKNEGAAIYKGILRD-GTRVKI-EIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGW 303
+G+ +YKG+ + V E+ +++ R F EE ++L QH N++R
Sbjct: 17 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDS 76
Query: 304 ----NNSRRTRAIVTEWTNGGNVELWLSESAP-SWKHRLKVLIGVVEAMCYLQEQWPEVD 358
++ +VTE G ++ +L K +++ + +L + P +
Sbjct: 77 WESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPII 136
Query: 359 Y-DLRTGSVLLTD-NLEPLISRF---KIEYQHRSTKY---------------------VY 392
+ DL+ ++ +T I ++ + VY
Sbjct: 137 HRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEEKYDESVDVY 196
Query: 393 KFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERM 438
FG+ +LEM T+ P E + + P + V +
Sbjct: 197 AFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEV 242
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 68.1 bits (166), Expect = 2e-13
Identities = 30/221 (13%), Positives = 73/221 (33%), Gaps = 31/221 (14%)
Query: 240 FSKKNLVGKNEGAAIYKGILRDGTR---VKIEIYKGDVSREIRDEFVEECKLLVQFQHKN 296
F +GK + +Y + +K+ + + E ++ +H N
Sbjct: 8 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 67
Query: 297 LIRVLGWNNSRRTRAIVTEWTNGGNVELWLSESAP-SWKHRLKVLIGVVEAMCYLQEQWP 355
++R+ G+ + ++ E+ G V L + + + + + A+ Y +
Sbjct: 68 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 127
Query: 356 EVDYDLRTGSVLLTDNLEPLISRFKIEYQHRSTKY------------------------- 390
+ D++ ++LL E I+ F S++
Sbjct: 128 -IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVD 186
Query: 391 VYKFGLFLLEMITNRRPLEEFERGEAGF-IEYIRMHYPENL 430
++ G+ E + + P E E I + +P+ +
Sbjct: 187 LWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV 227
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 68.0 bits (165), Expect = 3e-13
Identities = 51/302 (16%), Positives = 101/302 (33%), Gaps = 77/302 (25%)
Query: 238 NGFSKKNLVGKNEGAAIYKGILR------DGTRVKIEIYKGDVSREIRDEFVEECKLLVQ 291
N +G+ +++ T V +++ K + S +++ +F E L+ +
Sbjct: 13 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 72
Query: 292 FQHKNLIRVLGWNNSRRTRAIVTEWTNGGNVELWLSESAP-------------------- 331
F + N++++LG + ++ E+ G++ +L +P
Sbjct: 73 FDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSP 132
Query: 332 -----SWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEYQHR 386
S +L + V M YL E V DL T + L+ +N+ I+ F +
Sbjct: 133 GPPPLSCAEQLCIARQVAAGMAYLSE-RKFVHRDLATRNCLVGENMVVKIADFGLSRNIY 191
Query: 387 STKY-----------------------------VYKFGLFLLEMITNRRPLEEFERGEAG 417
S Y V+ +G+ L E+ +
Sbjct: 192 SADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQP--------- 242
Query: 418 FIEYIRMHYPENLQLVVD-ERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMI 476
Y M + E + V D + EN + L +C + PS I+ ++
Sbjct: 243 ---YYGMAHEEVIYYVRDGNILACPENCPLELYN---LMRLCWSKLPADRPSFCSIHRIL 296
Query: 477 TR 478
R
Sbjct: 297 QR 298
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 67.9 bits (165), Expect = 3e-13
Identities = 43/260 (16%), Positives = 91/260 (35%), Gaps = 57/260 (21%)
Query: 238 NGFSKKNLVGKNEGAAIYKGILRDGTR---VKIEIYKGDVSREIRDEFVEECKLLVQF-Q 293
N ++++G+ + K ++ I+ K S++ +F E ++L +
Sbjct: 10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 69
Query: 294 HKNLIRVLGWNNSRRTRAIVTEWTNGGNVELWLSESAP-----------------SWKHR 336
H N+I +LG R + E+ GN+ +L +S S +
Sbjct: 70 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 129
Query: 337 LKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRF----------------- 379
L V M YL ++ + DL ++L+ +N I+ F
Sbjct: 130 LHFAADVARGMDYLSQK-QFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRL 188
Query: 380 --------KIEYQHRSTKY-VYKFGLFLLEMITNRRP-------LEEFERGEAGFIEYIR 423
+ Y +T V+ +G+ L E+++ E +E+ G+
Sbjct: 189 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKP 248
Query: 424 MHYPENLQLVVDERMMLTEN 443
++ + + ++ R E
Sbjct: 249 LNCDDEVYDLM--RQCWREK 266
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Score = 67.4 bits (164), Expect = 4e-13
Identities = 47/278 (16%), Positives = 92/278 (33%), Gaps = 53/278 (19%)
Query: 254 IYKGILR---DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTR 310
+ +G+ R V I++ K + +E + E +++ Q + ++R++G +
Sbjct: 25 VRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEA-L 83
Query: 311 AIVTEWTNGGNVELWLSESAP--SWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLL 368
+V E GG + +L + ++L V M YL+E+ V DL +VLL
Sbjct: 84 MLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK-NFVHRDLAARNVLL 142
Query: 369 TDNLEPLISRFKI-------------------------EYQHRSTKY-----VYKFGLFL 398
+ IS F + K+ V+ +G+ +
Sbjct: 143 VNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTM 202
Query: 399 LEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVD-ERMMLTENMFDQAEQGLGLGLM 457
E ++ + Y +M PE + + +RM + L
Sbjct: 203 WEALSYGQKP------------YKKMKGPEVMAFIEQGKRMECPPECPPELYA---LMSD 247
Query: 458 CTDQPTGKLPSLVQIYNMITRAYKSCPILTSENHRKSH 495
C P + + + Y S +H H
Sbjct: 248 CWIYKWEDRPDFLTVEQRMRACYYSLASKVEGHHHHHH 285
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 67.9 bits (165), Expect = 4e-13
Identities = 40/263 (15%), Positives = 93/263 (35%), Gaps = 28/263 (10%)
Query: 240 FSKKNLVGKNEGAAIYKGI-LRDGTRVKIEI----YKGDVSREIRDEFVEECKLLVQFQH 294
F K ++G +YKG+ + +G +VKI + + S + E ++E ++ +
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70
Query: 295 KNLIRVLGWNNSRRTRAIVTEWTNGGNVELWLSESAP-SWKHRLKVLIGVVEAMCYLQEQ 353
++ R+LG + + I G ++ ++ L + + + M YL+++
Sbjct: 71 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 130
Query: 354 WPEVDYDLRTGSVLLTDNLEPLISRFKI-------EYQHRSTKYVYKFGLFLLEMITNRR 406
V DL +VL+ I+ F + E ++ + LE I +R
Sbjct: 131 RL-VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 189
Query: 407 PLEEFERGEAGFIEYIRMHY---------PENLQLVVD--ERMMLTENMFDQAEQGLGLG 455
+ + G + M + + +++ ER+ +
Sbjct: 190 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYM---IM 246
Query: 456 LMCTDQPTGKLPSLVQIYNMITR 478
+ C P ++ ++
Sbjct: 247 VKCWMIDADSRPKFRELIIEFSK 269
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 65.4 bits (159), Expect = 2e-12
Identities = 25/196 (12%), Positives = 68/196 (34%), Gaps = 30/196 (15%)
Query: 240 FSKKNLVGKNEGAAIYKGI-LRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLI 298
+++ +G+ +Y + + G V I + ++ + E ++ + ++ N++
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQ-QQPKKELIINEILVMRENKNPNIV 80
Query: 299 RVLGWNNSRRTRAIVTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVD 358
L +V E+ GG++ ++E+ V ++A+ +L +
Sbjct: 81 NYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQV-IH 139
Query: 359 YDLRTGSVLLTDNLEPL-----ISRFKIEYQHRSTKY----------------------V 391
D+++ ++LL + Q + + +
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDI 199
Query: 392 YKFGLFLLEMITNRRP 407
+ G+ +EMI P
Sbjct: 200 WSLGIMAIEMIEGEPP 215
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Score = 64.4 bits (156), Expect = 4e-12
Identities = 46/286 (16%), Positives = 91/286 (31%), Gaps = 56/286 (19%)
Query: 242 KKNLVGKNEGAAIYKGILRDGTRVKI----EIYKGDVSREIRDEFVEECKLLVQFQHKNL 297
+ +G + KG + VK + ++DE + E ++ Q + +
Sbjct: 11 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 70
Query: 298 IRVLGWNNSRRTRAIVTEWTNGGNVELWLSESAP-SWKHRLKVLIGVVEAMCYLQEQWPE 356
+R++G + +V E G + +L ++ K+ ++++ V M YL+E
Sbjct: 71 VRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNF- 128
Query: 357 VDYDLRTGSVLLTDNLEPLISRFKI------EYQHRSTKY-------------------- 390
V DL +VLL IS F + + + +
Sbjct: 129 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 188
Query: 391 ----VYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVV-DERMMLTENMF 445
V+ FG+ + E + + Y M E ++ ERM
Sbjct: 189 SKSDVWSFGVLMWEAFSYGQKP------------YRGMKGSEVTAMLEKGERMGCPAGCP 236
Query: 446 DQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSCPILTSENH 491
+ L +C P + + Y + +E H
Sbjct: 237 REMYD---LMNLCWTYDVENRPGFAAVELRLRNYYYD---VVNEGH 276
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 63.9 bits (155), Expect = 6e-12
Identities = 30/242 (12%), Positives = 73/242 (30%), Gaps = 39/242 (16%)
Query: 240 FSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLI 298
+ +G+ + + R V ++I + + + +E + H+N++
Sbjct: 7 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 66
Query: 299 RVLGWNNSRRTRAIVTEWTNGGNVELWLSESAP-SWKHRLKVLIGVVEAMCYLQEQWPEV 357
+ G + + E+ +GG + + + ++ + YL
Sbjct: 67 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI-T 125
Query: 358 DYDLRTGSVLLTDNLEPLISRFKI-------EYQHRSTKY-------------------- 390
D++ ++LL + IS F + + K
Sbjct: 126 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 185
Query: 391 ---VYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDE------RMMLT 441
V+ G+ L M+ P ++ + ++ N +D +L
Sbjct: 186 PVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILV 245
Query: 442 EN 443
EN
Sbjct: 246 EN 247
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 64.1 bits (155), Expect = 7e-12
Identities = 49/286 (17%), Positives = 99/286 (34%), Gaps = 63/286 (22%)
Query: 240 FSKKNLVGKNEGAAIYKGILR------DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQ 293
+ +G+ +Y+G+ + TRV I+ S R EF+ E ++ +F
Sbjct: 22 ITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFN 81
Query: 294 HKNLIRVLGWNNSRRTRAIVTEWTNGGNVELWL-----------SESAPSWKHRLKVLIG 342
+++R+LG + + ++ E G+++ +L + PS +++
Sbjct: 82 CHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGE 141
Query: 343 VVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEYQHRSTKY------------ 390
+ + M YL V DL + ++ ++ I F + T Y
Sbjct: 142 IADGMAYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 200
Query: 391 -----------------VYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLV 433
V+ FG+ L E+ T Y + + L+ V
Sbjct: 201 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP------------YQGLSNEQVLRFV 248
Query: 434 VD-ERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITR 478
++ + +N D + L MC PS ++I + I
Sbjct: 249 MEGGLLDKPDNCPDMLFE---LMRMCWQYNPKMRPSFLEIISSIKE 291
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Score = 61.7 bits (149), Expect = 4e-11
Identities = 42/278 (15%), Positives = 89/278 (32%), Gaps = 53/278 (19%)
Query: 243 KNLVGKNEGAAIYKGILRD----GTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLI 298
++G+ +Y G L D ++ +F+ E ++ F H N++
Sbjct: 32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 91
Query: 299 RVLGWN-NSRRTRAIVTEWTNGGNVE--LWLSESAPSWKHRLKVLIGVVEAMCYLQEQWP 355
+LG S + +V + G++ + P+ K + + V + M +
Sbjct: 92 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKF-LASKK 150
Query: 356 EVDYDLRTGSVLLTDNLEPLISRF---------KIEYQHRSTKY---------------- 390
V DL + +L + ++ F + + H T
Sbjct: 151 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQK 210
Query: 391 ------VYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENM 444
V+ FG+ L E++T P + L+ R++ E
Sbjct: 211 FTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT-----------VYLLQGRRLLQPEYC 259
Query: 445 FDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKS 482
D + + L C PS ++ + I+ + +
Sbjct: 260 PDPLYE---VMLKCWHPKAEMRPSFSELVSRISAIFST 294
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 60.8 bits (147), Expect = 6e-11
Identities = 42/250 (16%), Positives = 79/250 (31%), Gaps = 48/250 (19%)
Query: 240 FSKKNLVGKNEGAAIYKGILR-DGTRVKI-EIYKGDVSREIRDEFVEECKLLVQFQHKNL 297
+ +G K + DG + E+ G ++ + V E LL + +H N+
Sbjct: 6 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNI 65
Query: 298 IRVLGW--NNSRRTRAIVTEWTNGGNVELWLSESAP-----SWKHRLKVLIGVVEAMCYL 350
+R + + T IV E+ GG++ +++ + L+V+ + A+
Sbjct: 66 VRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKEC 125
Query: 351 QEQWPE----VDYDLRTGSVLLTDNLEPLISRF------------------KIEY----Q 384
+ + DL+ +V L + F Y Q
Sbjct: 126 HRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQ 185
Query: 385 HRSTKY-----VYKFGLFLLEMITNRRPLEEFERGEA------GFIEYIRMHYPENLQLV 433
Y ++ G L E+ P F + E G I Y + L +
Sbjct: 186 MNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEI 245
Query: 434 VDERMMLTEN 443
+ ML
Sbjct: 246 I--TRMLNLK 253
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 60.9 bits (147), Expect = 6e-11
Identities = 30/212 (14%), Positives = 70/212 (33%), Gaps = 39/212 (18%)
Query: 237 TNGFSKKNLVGKNEGAAIYKGI-LRDGTRVKIEIYKGDVSR--EIRDEFVEECKLLVQFQ 293
++ + ++G + ++ LR V +++ + D++R F E +
Sbjct: 6 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 65
Query: 294 HKNLIRVLGW----NNSRRTRAIVTEWTNGGNVELWLSESAP-SWKHRLKVLIGVVEAMC 348
H ++ V + IV E+ +G + + P + K ++V+ +A+
Sbjct: 66 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALN 125
Query: 349 YLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKI-------------------------EY 383
+ + D++ +++++ + F I
Sbjct: 126 FSHQNGIIH-RDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 184
Query: 384 QHRSTKY-----VYKFGLFLLEMITNRRPLEE 410
Q R VY G L E++T P
Sbjct: 185 QARGDSVDARSDVYSLGCVLYEVLTGEPPFTG 216
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 60.8 bits (147), Expect = 7e-11
Identities = 27/246 (10%), Positives = 76/246 (30%), Gaps = 41/246 (16%)
Query: 237 TNGFSKKNLVGKNEGAAIYKGI-LRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHK 295
+ + ++++G + + R V I+ E +L + +H
Sbjct: 8 RDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHP 67
Query: 296 NLIRVLGWNNSRRTRAIVTEWTNGGNVELWLSESAP-SWKHRLKVLIGVVEAMCYLQEQW 354
N++ + S ++ + +GG + + E + + +++ V++A+ YL +
Sbjct: 68 NIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLG 127
Query: 355 --PEVDYDLRTGSVLLTDNLEPLISRFKIE---------------------YQHRSTKY- 390
L ++ + +IS F + Y
Sbjct: 128 IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYS 187
Query: 391 ----VYKFGLFLLEMITNRRP---------LEEFERGEAGFIEYIRMHYPENLQLVVDER 437
+ G+ ++ P E+ + E F ++ + + R
Sbjct: 188 KAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFI--R 245
Query: 438 MMLTEN 443
++ ++
Sbjct: 246 HLMEKD 251
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 60.0 bits (145), Expect = 1e-10
Identities = 34/206 (16%), Positives = 70/206 (33%), Gaps = 37/206 (17%)
Query: 240 FSKKNLVGKNEGAAIYKGILRD-GTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLI 298
+ +G +YK ++ ++ S E ++++ E +L H N++
Sbjct: 14 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTK-SEEELEDYMVEIDILASCDHPNIV 72
Query: 299 RVLGWNNSRRTRAIVTEWTNGGNVELWLSESAP--SWKHRLKVLIGVVEAMCYLQEQWPE 356
++L I+ E+ GG V+ + E + V ++A+ YL +
Sbjct: 73 KLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNK-I 131
Query: 357 VDYDLRTGSVLLTDNLEPLI-----SRFKIEYQHRSTKY--------------------- 390
+ DL+ G++L T + + + S R +
Sbjct: 132 IHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRP 191
Query: 391 ------VYKFGLFLLEMITNRRPLEE 410
V+ G+ L+EM P E
Sbjct: 192 YDYKADVWSLGITLIEMAEIEPPHHE 217
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Score = 59.4 bits (143), Expect = 2e-10
Identities = 38/272 (13%), Positives = 95/272 (34%), Gaps = 52/272 (19%)
Query: 245 LVGKNEGAAIYKGILRD----GTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRV 300
+G+ + +++GI V I+ K S +R++F++E + QF H +++++
Sbjct: 14 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 73
Query: 301 LGWNNSRRTRAIVTEWTNGGNVE--LWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVD 358
+G + I+ E G + L + + + + + A+ YL+ + V
Sbjct: 74 IGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK-RFVH 131
Query: 359 YDLRTGSVLLTDNLEPLISRFKIEYQHRSTKY---------------------------- 390
D+ +VL++ N + F + + Y
Sbjct: 132 RDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASD 191
Query: 391 VYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVD-ERMMLTENMFDQAE 449
V+ FG+ + E++ + + + + + + + ER+ + N
Sbjct: 192 VWMFGVCMWEILMHGVKPFQG------------VKNNDVIGRIENGERLPMPPNCPPTLY 239
Query: 450 QGLGLGLMCTDQPTGKLPSLVQIYNMITRAYK 481
L C + P ++ ++ +
Sbjct: 240 S---LMTKCWAYDPSRRPRFTELKAQLSTILE 268
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 59.4 bits (143), Expect = 3e-10
Identities = 46/294 (15%), Positives = 90/294 (30%), Gaps = 69/294 (23%)
Query: 240 FSKKNLVGKNEGAAIYKGILR------DGTRVKIEIYKGDVSREIRDEFVEECKLLVQF- 292
S +G + + V +++ K R+ + E K+L
Sbjct: 25 LSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLG 84
Query: 293 QHKNLIRVLGWNNSRRTRAIVTEWTNGGNVELWL-------------------SESAPSW 333
H N++ +LG ++TE+ G++ +L E A
Sbjct: 85 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 144
Query: 334 KHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLIS---------------- 377
+ L V + M +L + + DL ++LLT I
Sbjct: 145 EDLLSFSYQVAKGMAFLASKNC-IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVV 203
Query: 378 ------------RFKIEYQHRSTK-YVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRM 424
I + + V+ +G+FL E+ + ++ F + I+
Sbjct: 204 KGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKE 263
Query: 425 HYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITR 478
+ RM+ E+ + + C D K P+ QI +I +
Sbjct: 264 GF----------RMLSPEHAPAEMYD---IMKTCWDADPLKRPTFKQIVQLIEK 304
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 59.3 bits (143), Expect = 3e-10
Identities = 23/246 (9%), Positives = 74/246 (30%), Gaps = 44/246 (17%)
Query: 238 NGFSKKNLVGKNEGAAIYKGI-LRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKN 296
+ + +G +++ G + + ++ +E + + +H
Sbjct: 26 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESD-KETVRKEIQTMSVLRHPT 84
Query: 297 LIRVLGWNNSRRTRAIVTEWTNGGNVELWLSESAP--SWKHRLKVLIGVVEAMCYLQEQW 354
L+ + ++ E+ +GG + +++ S ++ + V + +C++ E
Sbjct: 85 LVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN 144
Query: 355 PEVDYDLRTGSVLLTDNLEPLI-------SRFKIEYQHRSTKY----------------- 390
V DL+ +++ T + + Q
Sbjct: 145 Y-VHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVG 203
Query: 391 ----VYKFGLFLLEMITNRRP---------LEEFERGEAGFIEYIRMHYPENLQLVVDER 437
++ G+ +++ P L + + + E+ + + R
Sbjct: 204 YYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFI--R 261
Query: 438 MMLTEN 443
+L +
Sbjct: 262 KLLLAD 267
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 58.2 bits (140), Expect = 4e-10
Identities = 43/279 (15%), Positives = 85/279 (30%), Gaps = 55/279 (19%)
Query: 240 FSKKNLVGKNEGAAIYKGILR----DGTRVKIEIYKGDV--SREIRDEFVEECKLLVQFQ 293
+G + +G V ++ K DV E D+F+ E +
Sbjct: 10 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 69
Query: 294 HKNLIRVLGWNNSRRTRAIVTEWTNGGNVELWLSESAP-SWKHRLKVLIGVVEAMCYLQE 352
H+NLIR+ G + + + G ++ + + V E M YL+
Sbjct: 70 HRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLES 129
Query: 353 QWPEVDYDLRTGSVLLTDNLEPLISRFKI-------------------------EYQHRS 387
+ + DL ++LL I F + ++
Sbjct: 130 KRF-IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 188
Query: 388 TKY-----VYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVV--DERMML 440
+ + FG+ L EM T + +I ++ + L + ER+
Sbjct: 189 RTFSHASDTWMFGVTLWEMFTYGQEP------------WIGLNGSQILHKIDKEGERLPR 236
Query: 441 TENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRA 479
E+ + + C P+ V + + + A
Sbjct: 237 PEDCPQDIYN---VMVQCWAHKPEDRPTFVALRDFLLEA 272
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 58.3 bits (140), Expect = 7e-10
Identities = 35/259 (13%), Positives = 79/259 (30%), Gaps = 61/259 (23%)
Query: 240 FSKKNLVGKNEGAAIYKGILRDGTR------VKIEIYKGDVSREIRDEFVEECKLLVQF- 292
++G + ++ V +++ K R+ + E K++ Q
Sbjct: 39 LEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLG 98
Query: 293 QHKNLIRVLGWNNSRRTRAIVTEWTNGGNVELWLSESAP--------------------- 331
H+N++ +LG ++ E+ G++ +L
Sbjct: 99 SHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDL 158
Query: 332 ---SWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRF--------- 379
+++ L V + M +L+ + V DL +VL+T I F
Sbjct: 159 NVLTFEDLLCFAYQVAKGMEFLEFK-SCVHRDLAARNVLVTHGKVVKICDFGLARDIMSD 217
Query: 380 -------------------KIEYQHRSTK-YVYKFGLFLLEMITNRRPLEEFERGEAGFI 419
+ + K V+ +G+ L E+ + +A F
Sbjct: 218 SNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFY 277
Query: 420 EYIRMHYPENLQLVVDERM 438
+ I+ + + E +
Sbjct: 278 KLIQNGFKMDQPFYATEEI 296
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 58.2 bits (140), Expect = 9e-10
Identities = 30/226 (13%), Positives = 74/226 (32%), Gaps = 34/226 (15%)
Query: 238 NGFSKKNLVGKNEGAAIYKGILRDGTR---VKIEIYKGDVSREIRDEFVEEC---KLLVQ 291
N FS ++G+ +Y D + +K K ++ + E L+
Sbjct: 4 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 63
Query: 292 FQHKNLIRVLGWNNSRRTRAIVTEWTNGGNVELWLSESAP-SWKHRLKVLIGVVEAMCYL 350
++ + ++ + + + NGG++ LS+ S ++ + ++
Sbjct: 64 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHM 123
Query: 351 QEQWPEVDYDLRTGSVLLTDNLEPLISRFKI---------------------EYQHRSTK 389
++ V DL+ ++LL ++ IS + E +
Sbjct: 124 HNRFV-VYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVA 182
Query: 390 YVYK-----FGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENL 430
Y G L +++ P + + + I+ + + L
Sbjct: 183 YDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVEL 228
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 55.9 bits (133), Expect = 3e-09
Identities = 22/148 (14%), Positives = 43/148 (29%), Gaps = 2/148 (1%)
Query: 7 NNLHPPPDFNSTIMNNCIHNPSLKYCNSSSPMDLNEIFKSTIVASHLCNESKNPNCVESF 66
N +S + + N + + L + F
Sbjct: 158 GNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLF 217
Query: 67 PKIDLRSRPKITPLYLSFNFFWKYCPLGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSY 126
+ + L+F+ + +DL NN + G P + + +L++S+
Sbjct: 218 GSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSF 277
Query: 127 NQLSGDIPVESFSVLANLTFLNLSYNHF 154
N L G+IP L + N
Sbjct: 278 NNLCGEIP--QGGNLQRFDVSAYANNKC 303
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 44.0 bits (102), Expect = 2e-05
Identities = 16/60 (26%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 116 CTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLH 175
+ LDL N++ G +P + + L L LN+S+N+ ++ QRF+ S++ +
Sbjct: 243 SKNLNGLDLRNNRIYGTLP-QGLTQLKFLHSLNVSFNNLCG-EIPQGGNLQRFDVSAYAN 300
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 55.6 bits (133), Expect = 4e-09
Identities = 35/199 (17%), Positives = 73/199 (36%), Gaps = 35/199 (17%)
Query: 244 NLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSREIRDE----FVEECKLLVQFQHKNLI 298
+ +G+ + A +YK + V I+ K E +D + E KLL + H N+I
Sbjct: 4 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNII 63
Query: 299 RVLGWNNSRRTRAIVTEWTNGGNVELWLSESAP-SWKHRLKVLIGVVEAMCYLQEQWPEV 357
+L + ++V ++ + S + H ++ ++ + YL + W +
Sbjct: 64 GLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWI-L 122
Query: 358 DYDLRTGSVLLTDNLEPLISRFKI-----------------------EYQHRSTKY---- 390
DL+ ++LL +N ++ F + E + Y
Sbjct: 123 HRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGV 182
Query: 391 -VYKFGLFLLEMITNRRPL 408
++ G L E++ L
Sbjct: 183 DMWAVGCILAELLLRVPFL 201
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 55.4 bits (133), Expect = 5e-09
Identities = 29/239 (12%), Positives = 75/239 (31%), Gaps = 45/239 (18%)
Query: 245 LVGKNEGAAIYKGI-LRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGW 303
+G+ E +++ + + K V + +E +L +H+N++ +
Sbjct: 12 DLGRGEFGIVHRCVETSSKKTYMAKFVK--VKGTDQVLVKKEISILNIARHRNILHLHES 69
Query: 304 NNSRRTRAIVTEWTNGGNVELWLSESAP--SWKHRLKVLIGVVEAMCYLQEQWPEVDYDL 361
S ++ E+ +G ++ ++ SA + + + + V EA+ +L +D+
Sbjct: 70 FESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNI-GHFDI 128
Query: 362 RTGSVLLTDNLEPLI-------SRFKIEYQHRSTKY---------------------VYK 393
R +++ I +R + + ++
Sbjct: 129 RPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWS 188
Query: 394 FGLFLLEMITNRRP---------LEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTEN 443
G + +++ P +E E F E V +L +
Sbjct: 189 LGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFV--DRLLVKE 245
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Score = 55.1 bits (132), Expect = 7e-09
Identities = 36/221 (16%), Positives = 73/221 (33%), Gaps = 35/221 (15%)
Query: 240 FSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDV---SREIRDEFVEECKLLVQFQHK 295
F ++GK ++ + I+ K DV ++ VE+ L + ++H
Sbjct: 4 FILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP 63
Query: 296 NLIRVLGWNNSRRTRAIVTEWTNGGNVELWLSESAP-SWKHRLKVLIGVVEAMCYLQEQW 354
L + ++ V E+ NGG++ + ++ + +L +
Sbjct: 64 FLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKG 123
Query: 355 PEVDYDLRTGSVLLTDNLEPLISRFKIEYQHRSTKY------------------------ 390
V DL+ ++LL + I+ F + ++
Sbjct: 124 I-VYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNH 182
Query: 391 ---VYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPE 428
+ FG+ L EM+ + P + E IRM P
Sbjct: 183 SVDWWSFGVLLYEMLIGQSPFHGQDEEE--LFHSIRMDNPF 221
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 54.9 bits (131), Expect = 7e-09
Identities = 36/297 (12%), Positives = 82/297 (27%), Gaps = 68/297 (22%)
Query: 240 FSKKNLVGKNEGAAIYKGILR------DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQ 293
+G+ + + V +++ K + + E K+L+
Sbjct: 15 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG 74
Query: 294 HKNLIRVLG--WNNSRRTRAIVTEWTNGGNVELWL-----------------SESAPSWK 334
H + L ++ E+ GN+ +L + + +
Sbjct: 75 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 134
Query: 335 HRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRF-------KIEYQHRS 387
H + V + M +L + + DL ++LL++ I F K R
Sbjct: 135 HLICYSFQVAKGMEFLASRKC-IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 193
Query: 388 TK----------------------YVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMH 425
V+ FG+ L E+ + + + F ++
Sbjct: 194 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG 253
Query: 426 YPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKS 482
RM + + Q L C + P+ ++ + ++
Sbjct: 254 T----------RMRAPDYTTPEMYQ---TMLDCWHGEPSQRPTFSELVEHLGNLLQA 297
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 54.8 bits (131), Expect = 8e-09
Identities = 23/150 (15%), Positives = 54/150 (36%), Gaps = 6/150 (4%)
Query: 237 TNGFSKKNLVGKNEGAAIYKGI-LRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHK 295
++ + +G+ + + RV I+ + + E K+L++F+H+
Sbjct: 7 GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 66
Query: 296 NLIRVLGW----NNSRRTRAIVTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQ 351
N+I + + + G ++ L S H L ++ + Y+
Sbjct: 67 NIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIH 126
Query: 352 EQWPEVDYDLRTGSVLLTDNLEPLISRFKI 381
+ DL+ ++LL + I F +
Sbjct: 127 SAN-VLHRDLKPSNLLLNTTCDLKICDFGL 155
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 54.5 bits (130), Expect = 9e-09
Identities = 47/271 (17%), Positives = 90/271 (33%), Gaps = 64/271 (23%)
Query: 256 KGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQF-QHKNLIRVLGWNNSRRTRAIVT 314
K T+V +++ K D + + + + E +++ +HKN+I +LG ++
Sbjct: 39 KDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIV 98
Query: 315 EWTNGGNVELWLSESAP-----------------SWKHRLKVLIGVVEAMCYLQEQWPEV 357
E+ + GN+ +L P S K + V M YL + +
Sbjct: 99 EYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK-KCI 157
Query: 358 DYDLRTGSVLLTDNLEPLISRFKIEYQHRSTKY--------------------------- 390
DL +VL+T++ I+ F + Y
Sbjct: 158 HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQ 217
Query: 391 --VYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVD-ERMMLTENMFDQ 447
V+ FG+ L E+ T Y + E +L+ + RM N ++
Sbjct: 218 SDVWSFGVLLWEIFTLGGSP------------YPGVPVEELFKLLKEGHRMDKPSNCTNE 265
Query: 448 AEQGLGLGLMCTDQPTGKLPSLVQIYNMITR 478
+ C + P+ Q+ + R
Sbjct: 266 LYM---MMRDCWHAVPSQRPTFKQLVEDLDR 293
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Score = 53.4 bits (127), Expect = 2e-08
Identities = 21/144 (14%), Positives = 55/144 (38%), Gaps = 3/144 (2%)
Query: 240 FSKKNLVGKNEGAAIYKGILRDGTRVKI-EIYKGDVSREIRDEFVEECKLLVQFQHKNLI 298
+ +G+ +YK G + +I I + E +L + +H N++
Sbjct: 4 YHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIV 63
Query: 299 RVLGWNNSRRTRAIVTEWTNGGNVELWLSESAP-SWKHRLKVLIGVVEAMCYLQEQWPEV 357
++ ++++ +V E + +L L+ ++ + Y ++ +
Sbjct: 64 KLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRV-L 122
Query: 358 DYDLRTGSVLLTDNLEPLISRFKI 381
DL+ ++L+ E I+ F +
Sbjct: 123 HRDLKPQNLLINREGELKIADFGL 146
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 53.5 bits (128), Expect = 2e-08
Identities = 25/244 (10%), Positives = 73/244 (29%), Gaps = 44/244 (18%)
Query: 240 FSKKNLVGKNEGAAIYKGI-LRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLI 298
+ +G +++ + G + + + E ++ Q H LI
Sbjct: 31 YDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLD-KYTVKNEISIMNQLHHPKLI 89
Query: 299 RVLGWNNSRRTRAIVTEWTNGGNVELWLSES--APSWKHRLKVLIGVVEAMCYLQEQWPE 356
+ + ++ E+ +GG + ++ S + + E + ++ E
Sbjct: 90 NLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSI- 148
Query: 357 VDYDLRTGSVLLTDN-----------LEPLISRFKIEYQHRSTKY--------------- 390
V D++ +++ L ++ +I +T
Sbjct: 149 VHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFY 208
Query: 391 --VYKFGLFLLEMITNRRP---------LEEFERGEAGFIEYIRMHYPENLQLVVDERMM 439
++ G+ +++ P L+ +R + F E + + + +
Sbjct: 209 TDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFI--KNL 266
Query: 440 LTEN 443
L +
Sbjct: 267 LQKE 270
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 53.1 bits (127), Expect = 3e-08
Identities = 22/201 (10%), Positives = 60/201 (29%), Gaps = 34/201 (16%)
Query: 240 FSKKNLVGKNEGAAIYKGI-LRDGTRVKIEIYKGD--VSREIRDEFVEECKLLVQFQHKN 296
F ++G+ + + L I+I + + E ++ + H
Sbjct: 10 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 69
Query: 297 LIRVLGWNNSRRTRAIVTEWTNGGNVELWLSESAP-SWKHRLKVLIGVVEAMCYLQEQWP 355
+++ + G + ++ + +V A+ YL +
Sbjct: 70 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 129
Query: 356 EVDYDLRTGSVLLTDNLEPLISRFKI-------EYQHRSTKY------------------ 390
+ DL+ ++LL +++ I+ F Q R+ +
Sbjct: 130 -IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSAC 188
Query: 391 ----VYKFGLFLLEMITNRRP 407
++ G + +++ P
Sbjct: 189 KSSDLWALGCIIYQLVAGLPP 209
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 51.2 bits (122), Expect = 9e-08
Identities = 30/192 (15%), Positives = 77/192 (40%), Gaps = 16/192 (8%)
Query: 240 FSKKNLVGKNEGAAIYKGI-LRDGTRVKIEI--------YKGDVSREIRDEFVEECKLLV 290
+ K ++G+ + + + I ++I + + +E+R+ ++E +L
Sbjct: 5 YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR 64
Query: 291 QFQ-HKNLIRVLGWNNSRRTRAIVTEWTNGGNVELWLSESAP-SWKHRLKVLIGVVEAMC 348
+ H N+I++ + +V + G + +L+E S K K++ ++E +C
Sbjct: 65 KVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVIC 124
Query: 349 YLQEQWPEVDYDLRTGSVLLTDNLEPLISRF----KIEYQHRSTKYVYKFGLFLLEMITN 404
L + DL+ ++LL D++ ++ F +++ + + E+I
Sbjct: 125 ALHKLNIVH-RDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIEC 183
Query: 405 RRPLEEFERGEA 416
G+
Sbjct: 184 SMNDNHPGYGKE 195
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 51.9 bits (123), Expect = 9e-08
Identities = 26/138 (18%), Positives = 44/138 (31%), Gaps = 11/138 (7%)
Query: 21 NNCIHNPSLKYCNSSSPMDLNEIFKSTIVASHLCNESKNPNCVESFPKIDLRSRP--KIT 78
N + L + + L S I N E+ + +T
Sbjct: 251 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLT 310
Query: 79 PLYLSFNFFWKYCPLGIMS----IDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIP 134
L L FN P+ ++ + +NN + + T I L +NQ+S P
Sbjct: 311 YLTLYFNNISDISPVSSLTKLQRLFFANNKVSD--VSSLANLTNINWLSAGHNQISDLTP 368
Query: 135 VESFSVLANLTFLNLSYN 152
+ L +T L L+
Sbjct: 369 ---LANLTRITQLGLNDQ 383
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 48.8 bits (115), Expect = 8e-07
Identities = 16/73 (21%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Query: 84 FNFFWKYCPLGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLAN 143
+ + + L N++ P+ L T++Q L + N++S V S + L N
Sbjct: 298 EDISPISNLKNLTYLTLYFNNISDISPVSSL--TKLQRLFFANNKVSD---VSSLANLTN 352
Query: 144 LTFLNLSYNHFSE 156
+ +L+ +N S+
Sbjct: 353 INWLSAGHNQISD 365
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 51.2 bits (122), Expect = 1e-07
Identities = 31/198 (15%), Positives = 62/198 (31%), Gaps = 27/198 (13%)
Query: 240 FSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGD--VSREIRDEFVEECKLLVQFQHKN 296
F +G ++ R +G +++ K + V + + +E +L H
Sbjct: 6 FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPF 65
Query: 297 LIRVLGWNNSRRTRAIVTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPE 356
+IR+ G + ++ ++ GG + L +S K V
Sbjct: 66 IIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDI 125
Query: 357 VDYDLRTGSVLLTDNLEPLISRFKIEYQHRSTKY------------------------VY 392
+ DL+ ++LL N I+ F Y +
Sbjct: 126 IYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLCGTPDYIAPEVVSTKPYNKSIDWW 185
Query: 393 KFGLFLLEMITNRRPLEE 410
FG+ + EM+ P +
Sbjct: 186 SFGILIYEMLAGYTPFYD 203
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.9 bits (118), Expect = 3e-07
Identities = 28/200 (14%), Positives = 68/200 (34%), Gaps = 33/200 (16%)
Query: 240 FSKKNLVGKNEGAAIYKGILR-DGTRVKI-EIYKGDVSREIRDEFVEECKLLVQFQHKNL 297
F K +G+ +YK + G V + +I + + + E LL + H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 298 IRVLGWNNSRRTRAIVTEWTNGGNVELWLSESAP--SWKHRLKVLIGVVEAMCYLQEQWP 355
+++L ++ +V E+ + + + + L +++ + +
Sbjct: 64 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR- 122
Query: 356 EVDYDLRTGSVLLTDNLEPLISRFKI---------------------------EYQHRST 388
+ DL+ ++L+ ++ F + ++ ST
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYST 182
Query: 389 KY-VYKFGLFLLEMITNRRP 407
++ G EM+T R
Sbjct: 183 AVDIWSLGCIFAEMVTRRAL 202
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.2 bits (116), Expect = 5e-07
Identities = 30/201 (14%), Positives = 72/201 (35%), Gaps = 34/201 (16%)
Query: 240 FSKKNLVGKNEGAAIYKGILRDGTR---VKIEIYKGDVSREIRDEFVEECKLLVQFQHKN 296
+ K +G+ ++K R+ +K + D + + E LL + +HKN
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKR-VRLDDDDEGVPSSALREICLLKELKHKN 62
Query: 297 LIRVLGWNNSRRTRAIVTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWP 355
++R+ +S + +V E+ + + + S + L +++ + + +
Sbjct: 63 IVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN- 121
Query: 356 EVDYDLRTGSVLLTDNLEPLISRFKI-----------------------EYQHRSTKY-- 390
+ DL+ ++L+ N E ++ F + + + Y
Sbjct: 122 VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYST 181
Query: 391 ---VYKFGLFLLEMITNRRPL 408
++ G E+ RPL
Sbjct: 182 SIDMWSAGCIFAELANAGRPL 202
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.9 bits (113), Expect = 2e-06
Identities = 35/201 (17%), Positives = 69/201 (34%), Gaps = 32/201 (15%)
Query: 238 NGFSKKNLVGKNEGAAIYKGI-LRDGTRVKIEIYKGDV--SREIRDEFVEECKLLVQFQH 294
N F L+GK + G ++I + +V +++ V E ++L +H
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 295 KNLIRVLGWNNSRRTRAIVTEWTNGGNVELWLSESAP-SWKHRLKVLIGVVEAMCYLQEQ 353
L + + V E+ NGG + LS + + +V A+ YL +
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR 124
Query: 354 WPEVDYDLRTGSVLLTDNLEPLISRFKIEYQHRSTKY----------------------- 390
V D++ +++L + I+ F + + S
Sbjct: 125 DV-VYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYG 183
Query: 391 ----VYKFGLFLLEMITNRRP 407
+ G+ + EM+ R P
Sbjct: 184 RAVDWWGLGVVMYEMMCGRLP 204
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.1 bits (111), Expect = 2e-06
Identities = 27/207 (13%), Positives = 65/207 (31%), Gaps = 45/207 (21%)
Query: 240 FSKKNLVGKNEGAAIYKGILRD-GTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLI 298
++ ++G +Y+ L D G V I+ D + R E +++ + H N++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNIV 76
Query: 299 RVLGW------NNSRRTRAIVTEWTNGGNVELWL----SESAPSWKHRLKVLIGVVEAMC 348
R+ + +V ++ + ++ + + + ++
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 349 YLQEQWPEVDYDLRTGSVLLT-DNLEPLISRFKI----------------------EYQH 385
Y+ D++ ++LL D + F E
Sbjct: 137 YIHSFG-ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF 195
Query: 386 RSTKY-----VYKFGLFLLEMITNRRP 407
+T Y V+ G L E++ +
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLGQPI 222
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.9 bits (108), Expect = 5e-06
Identities = 25/142 (17%), Positives = 55/142 (38%), Gaps = 8/142 (5%)
Query: 240 FSKKNLVGKNEGAAIYKGI-LRDGTRVKIEIYK-----GDVSREIRDEFVEECKLLVQFQ 293
+ +G + A + K G + + K R++ E +L + Q
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 294 HKNLIRVLGWNNSRRTRAIVTEWTNGGNVELWLSESAP-SWKHRLKVLIGVVEAMCYLQE 352
H N+I + ++ ++ E GG + +L+E + + + L ++ + YL
Sbjct: 72 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 131
Query: 353 QWPEVDYDLRTGSVLLTDNLEP 374
+DL+ +++L D P
Sbjct: 132 LQI-AHFDLKPENIMLLDRNVP 152
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Score = 45.6 bits (107), Expect = 7e-06
Identities = 22/159 (13%), Positives = 50/159 (31%), Gaps = 5/159 (3%)
Query: 238 NGFSKKNLVGKNEGAAIYKGI-LRDGTRVKIEIYKGD--VSREIRDEFVEECKLLVQFQH 294
+ F + +G + G ++I V + + + E ++L
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 295 KNLIRVLGWNNSRRTRAIVTEWTNGGNVELWLSESAP-SWKHRLKVLIGVVEAMCYLQEQ 353
L+++ +V E+ GG + L S H +V YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 354 WPEVDYDLRTGSVLLTDNLEPLISRFKIEYQHRSTKYVY 392
+ DL+ ++L+ ++ F + + +
Sbjct: 161 DL-IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTL 198
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 43.2 bits (101), Expect = 8e-06
Identities = 19/90 (21%), Positives = 27/90 (30%), Gaps = 3/90 (3%)
Query: 70 DLRSRPKITPLYLSFNFFWKYCPLGIMSIDL---SNNSLKGAFPIDVLLCTQIQALDLSY 126
L +T L LS N P L + V ++Q L L
Sbjct: 15 HLEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALENVDGVANLPRLQELLLCN 74
Query: 127 NQLSGDIPVESFSVLANLTFLNLSYNHFSE 156
N+L ++ L LNL N +
Sbjct: 75 NRLQQSAAIQPLVSCPRLVLLNLQGNSLCQ 104
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 35.1 bits (80), Expect = 0.004
Identities = 9/38 (23%), Positives = 18/38 (47%), Gaps = 3/38 (7%)
Query: 120 QALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEM 157
+ L L++ L+ + L +T L+LS+N +
Sbjct: 1 RVLHLAHKDLTV---LCHLEQLLLVTHLDLSHNRLRAL 35
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 43.5 bits (101), Expect = 3e-05
Identities = 22/101 (21%), Positives = 36/101 (35%), Gaps = 1/101 (0%)
Query: 92 PLGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSY 151
P +DL NN + D + L L N++S P +F+ L L L LS
Sbjct: 30 PPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISP-GAFAPLVKLERLYLSK 88
Query: 152 NHFSEMKVSDTKFFQRFNSSSFLHSGLFPGHHNYTIKAVIL 192
N E+ K Q + + N + +++
Sbjct: 89 NQLKELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVV 129
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 36.9 bits (84), Expect = 0.004
Identities = 17/58 (29%), Positives = 23/58 (39%), Gaps = 4/58 (6%)
Query: 97 SIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHF 154
+ S+ L+ P D L LDL N+++ I F L NL L L N
Sbjct: 14 VVQCSDLGLE-KVPKD--LPPDTALLDLQNNKITE-IKDGDFKNLKNLHTLILINNKI 67
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.9 bits (94), Expect = 2e-04
Identities = 15/64 (23%), Positives = 24/64 (37%), Gaps = 4/64 (6%)
Query: 94 GIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNH 153
+ ++ +L A P D L L LS N L + + LT LNL
Sbjct: 11 SHLEVNCDKRNLT-ALPPD--LPKDTTILHLSENLLYT-FSLATLMPYTRLTQLNLDRAE 66
Query: 154 FSEM 157
+++
Sbjct: 67 LTKL 70
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.7 bits (93), Expect = 3e-04
Identities = 19/72 (26%), Positives = 28/72 (38%), Gaps = 4/72 (5%)
Query: 93 LGIMSIDLSNNSLKGAFPIDVL-LCTQIQALDLSYNQLSGDIP---VESFSVLANLTFLN 148
L I S+D+ L A ++L L Q Q + L L+ + V L LN
Sbjct: 2 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELN 61
Query: 149 LSYNHFSEMKVS 160
L N ++ V
Sbjct: 62 LRSNELGDVGVH 73
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.3 bits (92), Expect = 5e-04
Identities = 16/159 (10%), Positives = 43/159 (27%), Gaps = 8/159 (5%)
Query: 6 LNNLHPPPDFNSTIMNNCIHNPSLKYCNSSSPMDLNEIFKSTIVASHLCNESKNPNCVES 65
+L + + + ++ + + A+ + S
Sbjct: 282 KESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRF 341
Query: 66 FPKIDLRSRPKITPLYLSFNFFWKYCPLGIMSIDLSNNSL--KGAFPIDVLL--CTQIQA 121
++ + + + + L++ + + L ++
Sbjct: 342 LLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRE 401
Query: 122 LDLSYNQLSGDIPVESFSVLAN----LTFLNLSYNHFSE 156
LDLS N L ++ + L L L ++SE
Sbjct: 402 LDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWSE 440
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.6 bits (90), Expect = 8e-04
Identities = 11/43 (25%), Positives = 18/43 (41%)
Query: 119 IQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSD 161
IQ+LD+ +LS E +L + L +E + D
Sbjct: 4 IQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKD 46
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.2 bits (93), Expect = 3e-04
Identities = 29/212 (13%), Positives = 66/212 (31%), Gaps = 42/212 (19%)
Query: 236 ATNGFSKKNLVGKNEGAAIYKGILRDGT-------RVKIEIYKGDVSREIRDEFVEECKL 288
A + +G+ ++K RV+++ + + E V +
Sbjct: 5 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIRE-VAVLRH 63
Query: 289 LVQFQHKNLIRVLGWNNSRRTRA-----IVTEWTNGGNVELWLSESAP--SWKHRLKVLI 341
L F+H N++R+ RT +V E + P + ++
Sbjct: 64 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMF 123
Query: 342 GVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFK-----------------IEY- 383
++ + +L V DL+ ++L+T + + ++ F + Y
Sbjct: 124 QLLRGLDFLHSHR-VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYR 182
Query: 384 ---QHRSTKY-----VYKFGLFLLEMITNRRP 407
+ Y ++ G EM +
Sbjct: 183 APEVLLQSSYATPVDLWSVGCIFAEMFRRKPL 214
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.3 bits (93), Expect = 4e-04
Identities = 23/148 (15%), Positives = 52/148 (35%), Gaps = 14/148 (9%)
Query: 214 RPDFLPRMLRRNHKFTTWMLKAATNGFSKKNLVGKNEGAAIYKGI-LRDGTRVKI-EIYK 271
RP F + L + T W + + + VG ++ + G RV + ++ +
Sbjct: 1 RPTFYRQELNK----TIWEV---PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR 53
Query: 272 GDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRA-----IVTEWTNGGNVELWL 326
S E +LL +H+N+I +L R+ + G ++ +
Sbjct: 54 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 113
Query: 327 SESAPSWKHRLKVLIGVVEAMCYLQEQW 354
+ H ++ ++ + Y+
Sbjct: 114 KCQKLTDDHVQFLIYQILRGLKYIHSAD 141
|
| >d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 156 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: High affinity nerve growth factor receptor, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.5 bits (85), Expect = 0.001
Identities = 17/138 (12%), Positives = 32/138 (23%), Gaps = 9/138 (6%)
Query: 91 CPLGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLS 150
CP G + + + + + L + Q + + L L L +
Sbjct: 6 CPHGSSGLRCTRDGAL-DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIV 64
Query: 151 YNHFSEMKVSDTKFFQRFNSSSFLHSGLFPGHHNYTIKAVILLVGFPIFVILMISCTGWL 210
+ + F R + N V L++S
Sbjct: 65 KSGLRFVAPDAFHFTPRLSR--------LNLSFNALESLSWKTVQGLSLQELVLSGNPLH 116
Query: 211 CFVRPDFLPRMLRRNHKF 228
C +L R
Sbjct: 117 CSCALRWLQRWEEEGLGG 134
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 344 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 38.7 bits (88), Expect = 0.001
Identities = 18/84 (21%), Positives = 29/84 (34%), Gaps = 10/84 (11%)
Query: 83 SFNFFWKYCPLGIMSIDLSNNSLKG------AFPIDVLLCTQIQALDLSYNQLSGD---- 132
S + + L++ L L +Q L L YN++ D
Sbjct: 233 SALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRT 292
Query: 133 IPVESFSVLANLTFLNLSYNHFSE 156
+ + +L FL L+ N FSE
Sbjct: 293 LKTVIDEKMPDLLFLELNGNRFSE 316
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 37.5 bits (85), Expect = 0.003
Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 9/73 (12%)
Query: 85 NFFWKYCPLGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANL 144
P + +++SNN L L +++ L S+N L+ ++P + NL
Sbjct: 276 IRSLCDLPPSLEELNVSNNKLIELPA----LPPRLERLIASFNHLA-EVP----ELPQNL 326
Query: 145 TFLNLSYNHFSEM 157
L++ YN E
Sbjct: 327 KQLHVEYNPLREF 339
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 508 | |||
| d1uwha_ | 276 | B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 100.0 | |
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 100.0 | |
| d1nvra_ | 271 | Cell cycle checkpoint kinase chk1 {Human (Homo sap | 100.0 | |
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 100.0 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 100.0 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 100.0 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 100.0 | |
| d1yhwa1 | 293 | pak1 {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d2jfla1 | 288 | STE20-like serine/threonine-protein kinase, SLK {H | 100.0 | |
| d2j4za1 | 263 | Aurora-related kinase 1 (aurora-2) {Human (Homo sa | 100.0 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 100.0 | |
| d1s9ja_ | 322 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| d1t4ha_ | 270 | Protein kinase wnk1 {Human (Homo sapiens) [TaxId: | 100.0 | |
| d2java1 | 269 | Serine/threonine-protein kinase Nek2 {Human (Homo | 100.0 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 100.0 | |
| d1fmka3 | 285 | c-src tyrosine kinase {Human (Homo sapiens) [TaxId | 100.0 | |
| d1rjba_ | 325 | Fl cytokine receptor {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1u5ra_ | 309 | Serine/threonine protein kinase TAO2 {Rat (Rattus | 100.0 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 100.0 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 100.0 | |
| d1a06a_ | 307 | Calmodulin-dependent protein kinase {Rat (Rattus n | 100.0 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 100.0 | |
| d1uu3a_ | 288 | 3-phosphoinositide dependent protein kinase-1 Pdk1 | 100.0 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1koba_ | 352 | Twitchin, kinase domain {California sea hare (Aply | 100.0 | |
| d1jksa_ | 293 | Death-associated protein kinase, Dap {Human (Homo | 100.0 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1koaa2 | 350 | Twitchin, kinase domain {Caenorhabditis elegans, p | 100.0 | |
| d1phka_ | 277 | gamma-subunit of glycogen phosphorylase kinase (Ph | 100.0 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 100.0 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 100.0 | |
| d1ywna1 | 299 | Vascular endothelial growth factor receptor 2 (kdr | 100.0 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 100.0 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 100.0 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 100.0 | |
| d1tkia_ | 321 | Titin, kinase domain {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 100.0 | |
| d1o6la_ | 337 | Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d1gz8a_ | 298 | Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T | 100.0 | |
| d1fota_ | 316 | cAMP-dependent PK, catalytic subunit {Baker's yeas | 100.0 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 100.0 | |
| d1ob3a_ | 286 | Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) | 100.0 | |
| d1ua2a_ | 299 | Cell division protein kinase 7, CDK7 {Human (Homo | 100.0 | |
| d1rdqe_ | 350 | cAMP-dependent PK, catalytic subunit {Mouse (Mus m | 100.0 | |
| d1xjda_ | 320 | Protein kinase C, theta type {Human (Homo sapiens) | 100.0 | |
| d2ozaa1 | 335 | MAP kinase activated protein kinase 2, mapkap2 {Hu | 100.0 | |
| d1xwsa_ | 273 | Proto-oncogene serine/threonine-protein kinase Pim | 100.0 | |
| d1unla_ | 292 | Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T | 100.0 | |
| d1pmea_ | 345 | MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606 | 100.0 | |
| d1cm8a_ | 346 | MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1q5ka_ | 350 | Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho | 100.0 | |
| d1blxa_ | 305 | Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T | 100.0 | |
| d3blha1 | 318 | Cell division protein kinase 9, CDK9 {Human (Homo | 100.0 | |
| d1vzoa_ | 322 | Ribosomal protein S6 kinase alpha 5, Msk1 {Human ( | 100.0 | |
| d2gfsa1 | 348 | MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d3bqca1 | 328 | Protein kinase CK2, alpha subunit {Rattus norvegic | 100.0 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 100.0 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 100.0 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 100.0 | |
| d1zara2 | 191 | Rio2 serine protein kinase C-terminal domain {Arch | 99.9 | |
| d1w8aa_ | 192 | Slit {Fruit fly (Drosophila melanogaster) [TaxId: | 99.63 | |
| d1p9ag_ | 266 | von Willebrand factor binding domain of glycoprote | 99.58 | |
| d1w8aa_ | 192 | Slit {Fruit fly (Drosophila melanogaster) [TaxId: | 99.57 | |
| d1ogqa_ | 313 | Polygalacturonase inhibiting protein PGIP {Kidney | 99.54 | |
| d1ozna_ | 284 | Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Huma | 99.47 | |
| d1ozna_ | 284 | Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Huma | 99.46 | |
| d1ogqa_ | 313 | Polygalacturonase inhibiting protein PGIP {Kidney | 99.45 | |
| d1xkua_ | 305 | Decorin {Cow (Bos taurus) [TaxId: 9913]} | 99.39 | |
| d1p9ag_ | 266 | von Willebrand factor binding domain of glycoprote | 99.38 | |
| d1dcea3 | 124 | Rab geranylgeranyltransferase alpha-subunit, C-ter | 99.34 | |
| d1dcea3 | 124 | Rab geranylgeranyltransferase alpha-subunit, C-ter | 99.34 | |
| d1a9na_ | 162 | Splicesomal U2A' protein {Human (Homo sapiens) [Ta | 99.32 | |
| d1a9na_ | 162 | Splicesomal U2A' protein {Human (Homo sapiens) [Ta | 99.29 | |
| d1xkua_ | 305 | Decorin {Cow (Bos taurus) [TaxId: 9913]} | 99.25 | |
| d2omza2 | 384 | Internalin A {Listeria monocytogenes [TaxId: 1639] | 99.2 | |
| d1xwdc1 | 242 | Follicle-stimulating hormone receptor {Human (Homo | 99.17 | |
| d2ifga3 | 156 | High affinity nerve growth factor receptor, N-term | 99.16 | |
| d1h6ta2 | 210 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.15 | |
| d2omxa2 | 199 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.11 | |
| d1m9la_ | 198 | Outer arm dynein light chain 1 {Green algae (Chlam | 99.11 | |
| d2ifga3 | 156 | High affinity nerve growth factor receptor, N-term | 99.1 | |
| d2omxa2 | 199 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.09 | |
| d1h6ua2 | 227 | Internalin H {Listeria monocytogenes [TaxId: 1639] | 99.03 | |
| d1h6ta2 | 210 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.01 | |
| d1m9la_ | 198 | Outer arm dynein light chain 1 {Green algae (Chlam | 98.97 | |
| d2omza2 | 384 | Internalin A {Listeria monocytogenes [TaxId: 1639] | 98.93 | |
| d1h6ua2 | 227 | Internalin H {Listeria monocytogenes [TaxId: 1639] | 98.91 | |
| d1j7la_ | 263 | Type IIIa 3',5"-aminoglycoside phosphotransferase | 98.56 | |
| d1jl5a_ | 353 | Leucine rich effector protein YopM {Yersinia pesti | 98.46 | |
| d1xwdc1 | 242 | Follicle-stimulating hormone receptor {Human (Homo | 98.41 | |
| d1koha1 | 162 | mRNA export factor tap {Human (Homo sapiens) [TaxI | 98.26 | |
| d1koha1 | 162 | mRNA export factor tap {Human (Homo sapiens) [TaxI | 98.26 | |
| d1nd4a_ | 255 | Aminoglycoside 3'-phosphotransferase IIa (Kanamyci | 98.21 | |
| d1jl5a_ | 353 | Leucine rich effector protein YopM {Yersinia pesti | 98.2 | |
| d2pula1 | 392 | Methylthioribose kinase MtnK {Bacillus subtilis [T | 97.93 | |
| d1z7xw1 | 460 | Ribonuclease inhibitor {Human (Homo sapiens) [TaxI | 97.64 | |
| d2astb2 | 284 | Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sa | 97.59 | |
| d1zyla1 | 325 | RdoA {Escherichia coli [TaxId: 562]} | 97.57 | |
| d2ca6a1 | 344 | Rna1p (RanGAP1), N-terminal domain {Fission yeast | 97.43 | |
| d1z7xw1 | 460 | Ribonuclease inhibitor {Human (Homo sapiens) [TaxI | 97.26 | |
| d2astb2 | 284 | Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sa | 97.22 | |
| d2ppqa1 | 316 | Homoserine kinase ThrB {Agrobacterium tumefaciens | 97.06 | |
| d2ca6a1 | 344 | Rna1p (RanGAP1), N-terminal domain {Fission yeast | 96.9 | |
| d1nw1a_ | 395 | Choline kinase {Caenorhabditis elegans [TaxId: 623 | 96.81 | |
| d1pgva_ | 167 | Tropomodulin C-terminal domain {nematode (Caenorha | 96.39 | |
| d1pgva_ | 167 | Tropomodulin C-terminal domain {nematode (Caenorha | 95.58 | |
| d1io0a_ | 166 | Tropomodulin C-terminal domain {Chicken (Gallus ga | 94.12 | |
| d1io0a_ | 166 | Tropomodulin C-terminal domain {Chicken (Gallus ga | 94.01 |
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.5e-48 Score=374.09 Aligned_cols=234 Identities=20% Similarity=0.321 Sum_probs=189.8
Q ss_pred hcCCCCCceeeecCCeEEEEEEECCCCEEEEEEecCCC-CHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEe
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDV-SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTE 315 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 315 (508)
.++|+..+.||+|+||+||+|+++ ..||||+++... .....+.|.+|+.++++++||||+++++++.. +..++|||
T Consensus 7 ~~~~~~~~~lG~G~fg~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~-~~~~lv~E 83 (276)
T d1uwha_ 7 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA-PQLAIVTQ 83 (276)
T ss_dssp TTCCCCCSEEEECSSCEEEEEESS--SEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred cccEEEEEEEeeCCCcEEEEEEEC--CEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEec-cEEEEEEe
Confidence 467899999999999999999874 369999996433 34467889999999999999999999998754 56799999
Q ss_pred ecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC----------
Q 045127 316 WTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY---------- 383 (508)
Q Consensus 316 ~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~---------- 383 (508)
||++|+|.+++. +..+++.++..|+.||++||+|||++ +|+||||||+|||++.++.+||+|||++.
T Consensus 84 y~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~~-~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~~~~~ 162 (276)
T d1uwha_ 84 WCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK-SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ 162 (276)
T ss_dssp CCCEEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEEETTSSEEECCCCCSCC---------
T ss_pred cCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHhcC-CEeccccCHHHEEEcCCCCEEEccccceeeccccCCccc
Confidence 999999999996 56799999999999999999999999 99999999999999999999999998741
Q ss_pred ----------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCC
Q 045127 384 ----------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLT 441 (508)
Q Consensus 384 ----------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 441 (508)
.++.++|||||||++|||+||+.||.+..... .+...+..... .+.+...
T Consensus 163 ~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~-~~~~~~~~~~~-------~p~~~~~ 234 (276)
T d1uwha_ 163 FEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD-QIIFMVGRGYL-------SPDLSKV 234 (276)
T ss_dssp ---CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH-HHHHHHHHTSC-------CCCGGGS
T ss_pred ccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHH-HHHHHHhcCCC-------CCcchhc
Confidence 24567899999999999999999997543221 12222222111 1111000
Q ss_pred cchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhCC
Q 045127 442 ENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSCP 484 (508)
Q Consensus 442 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 484 (508)
.......+.+++.+||+.||++|||++||++.|+.+.++.|
T Consensus 235 --~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~Le~l~~~~P 275 (276)
T d1uwha_ 235 --RSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSLP 275 (276)
T ss_dssp --CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCC
T ss_pred --cccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHcCC
Confidence 01124567889999999999999999999999999987655
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=2.6e-48 Score=379.58 Aligned_cols=239 Identities=23% Similarity=0.373 Sum_probs=192.3
Q ss_pred CCHHHHHHhhc---------CCCCCceeeecCCeEEEEEEEC-CC---CEEEEEEecCCCCHHHHHHHHHHHHHHhhcCC
Q 045127 228 FTTWMLKAATN---------GFSKKNLVGKNEGAAIYKGILR-DG---TRVKIEIYKGDVSREIRDEFVEECKLLVQFQH 294 (508)
Q Consensus 228 ~~~~~l~~~~~---------~~~~~~~lg~G~~g~V~~~~~~-~~---~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h 294 (508)
++++|+.+++. +|+..+.||+|+||+||+|.+. ++ ..||||.+.........++|.+|++++++++|
T Consensus 7 ~t~~d~~~a~~~f~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H 86 (299)
T d1jpaa_ 7 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDH 86 (299)
T ss_dssp GGSSSHHHHHHHHSCBCCGGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCC
T ss_pred CCHHHHHHHHhhhchhhChhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCC
Confidence 34555555554 4455689999999999999974 23 36899998777677678889999999999999
Q ss_pred CCccceeeEEecCCeeEEEEeecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCC
Q 045127 295 KNLIRVLGWNNSRRTRAIVTEWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNL 372 (508)
Q Consensus 295 ~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~ 372 (508)
||||+++|++..++..++|||||++|+|.+++. ...+++.++..|+.||++||+|||++ +|+||||||+|||++.++
T Consensus 87 pnIv~l~g~~~~~~~~~iv~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~-~iiHrDlKp~NILl~~~~ 165 (299)
T d1jpaa_ 87 PNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADM-NYVHRDLAARNILVNSNL 165 (299)
T ss_dssp TTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTC
T ss_pred CCCccEEEEEeeCCEEEEEEEecCCCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHhhC-CCccCccccceEEECCCC
Confidence 999999999999999999999999999999887 45789999999999999999999999 999999999999999999
Q ss_pred ceEEeeccCCC--------------------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHH
Q 045127 373 EPLISRFKIEY--------------------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFI 419 (508)
Q Consensus 373 ~~kl~Dfg~~~--------------------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~ 419 (508)
.+||+|||+++ .++.++|||||||++|||+| |+.||.+.... .+.
T Consensus 166 ~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~--~~~ 243 (299)
T d1jpaa_ 166 VCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQ--DVI 243 (299)
T ss_dssp CEEECCC-----------------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHH
T ss_pred cEEECCcccceEccCCCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHH--HHH
Confidence 99999999742 34567999999999999998 89999754321 122
Q ss_pred HHHHHhccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhh
Q 045127 420 EYIRMHYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKS 482 (508)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 482 (508)
..+.... ++... ......+.+++.+||+.||++|||+.||++.|+++.+.
T Consensus 244 ~~i~~~~----------~~~~~---~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~~l~~ 293 (299)
T d1jpaa_ 244 NAIEQDY----------RLPPP---MDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRN 293 (299)
T ss_dssp HHHHTTC----------CCCCC---TTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred HHHHcCC----------CCCCC---ccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhcC
Confidence 2222111 11111 12345678899999999999999999999999998764
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-47 Score=368.63 Aligned_cols=227 Identities=17% Similarity=0.282 Sum_probs=187.2
Q ss_pred cCCCCCceeeecCCeEEEEEEECCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEeec
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWT 317 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 317 (508)
++|+..+.||+|+||+||+|.+.+++.||||+++.... ..++|.+|++++++++||||++++|++..++..++||||+
T Consensus 5 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~--~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~ 82 (263)
T d1sm2a_ 5 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM--SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM 82 (263)
T ss_dssp SCEEEEEEEECCSSCCEEEEEETTTEEEEEEECCSSSS--CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred HHcEEEEEEeeCCCeEEEEEEECCCCEEEEEEECCCcC--cHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEec
Confidence 46788899999999999999998888999999975433 3467999999999999999999999999999999999999
Q ss_pred CCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC-------------
Q 045127 318 NGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE------------- 382 (508)
Q Consensus 318 ~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~------------- 382 (508)
++|+|.+++. ...+++..+..++.||++||+|||++ +|+||||||+|||+++++.+||+|||++
T Consensus 83 ~~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~~-~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~ 161 (263)
T d1sm2a_ 83 EHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA-CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG 161 (263)
T ss_dssp TTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT-TCCCTTCSGGGEEECGGGCEEECSCC---------------
T ss_pred CCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHhhhcc-ceeecccchhheeecCCCCeEecccchheeccCCCceeecc
Confidence 9999999987 46689999999999999999999999 9999999999999999999999999874
Q ss_pred ---------------CCCCCcchhhHHHHHHHHHHhC-CCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHH
Q 045127 383 ---------------YQHRSTKYVYKFGLFLLEMITN-RRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFD 446 (508)
Q Consensus 383 ---------------~~~~~~~Dv~SlGvil~elltg-~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 446 (508)
..++.++|||||||++|||+|+ ++||.... ...+...+...... ..+ ..
T Consensus 162 ~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~--~~~~~~~i~~~~~~----------~~p---~~ 226 (263)
T d1sm2a_ 162 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS--NSEVVEDISTGFRL----------YKP---RL 226 (263)
T ss_dssp ---CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCC--HHHHHHHHHHTCCC----------CCC---TT
T ss_pred eecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCC--HHHHHHHHHhcCCC----------CCc---cc
Confidence 2456689999999999999995 55554221 11122222221110 000 11
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhh
Q 045127 447 QAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKS 482 (508)
Q Consensus 447 ~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 482 (508)
...++.+++.+||+.||++||||+||++.|+++.++
T Consensus 227 ~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~i~es 262 (263)
T d1sm2a_ 227 ASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAES 262 (263)
T ss_dssp SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhC
Confidence 235678899999999999999999999999999875
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.5e-47 Score=368.33 Aligned_cols=224 Identities=12% Similarity=0.168 Sum_probs=181.2
Q ss_pred hcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEe
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTE 315 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 315 (508)
.++|+..+.||+|+||+||+|++ .+|+.||||++......+..+.+.+|++++++++||||+++++++.+++..|+|||
T Consensus 4 ~~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmE 83 (271)
T d1nvra_ 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 83 (271)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CcceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEe
Confidence 46799999999999999999998 46899999999765444456779999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-----------
Q 045127 316 WTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY----------- 383 (508)
Q Consensus 316 ~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~----------- 383 (508)
|+++|+|.+++. ...+++.++..++.||++||+|||++ ||+||||||+|||+++++.+||+|||++.
T Consensus 84 y~~gg~L~~~l~~~~~l~e~~~~~i~~qi~~al~ylH~~-~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~~~~~ 162 (271)
T d1nvra_ 84 YCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI-GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 162 (271)
T ss_dssp CCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEECTTCCEEECCCTTCEECEETTEECCB
T ss_pred ccCCCcHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHc-CCccCcccHHHEEECCCCCEEEccchhheeeccCCccccc
Confidence 999999999998 56799999999999999999999999 99999999999999999999999999752
Q ss_pred ------------------C-CCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcch
Q 045127 384 ------------------Q-HRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENM 444 (508)
Q Consensus 384 ------------------~-~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 444 (508)
. ++.++||||+||++|||+||+.||.........+.......... .+ .
T Consensus 163 ~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~~~~~~~~------~~-------~ 229 (271)
T d1nvra_ 163 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL------NP-------W 229 (271)
T ss_dssp CCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHHHTTCTTS------TT-------G
T ss_pred cceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCC------Cc-------c
Confidence 1 23468999999999999999999975443322222111110000 00 0
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 445 FDQAEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 445 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
......+.+++.+||+.||++|||++|+++
T Consensus 230 ~~~s~~~~~li~~~L~~dP~~R~t~~eil~ 259 (271)
T d1nvra_ 230 KKIDSAPLALLHKILVENPSARITIPDIKK 259 (271)
T ss_dssp GGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 111345667889999999999999999875
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=2e-47 Score=371.13 Aligned_cols=230 Identities=20% Similarity=0.274 Sum_probs=189.4
Q ss_pred hhcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEE
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVT 314 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 314 (508)
..++|+..+.||+|+||+||+|.+. +++.||||+++.... ..++|.+|++++++++|||||++++++.+++..++||
T Consensus 15 ~~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~--~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~ 92 (287)
T d1opja_ 15 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 92 (287)
T ss_dssp CGGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTCS--CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred cHHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCccc--hHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEEEe
Confidence 3457888899999999999999985 588999999965433 3567999999999999999999999999999999999
Q ss_pred eecCCCCHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC--------
Q 045127 315 EWTNGGNVELWLS---ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY-------- 383 (508)
Q Consensus 315 e~~~~gsL~~~l~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~-------- 383 (508)
|||++|+|.+++. ...+++..+..|+.||++||+|||++ ||+||||||+|||+++++.+||+|||++.
T Consensus 93 E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~-~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~ 171 (287)
T d1opja_ 93 EFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK-NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 171 (287)
T ss_dssp ECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECGGGCEEECCCCCTTTCCSSSSE
T ss_pred ecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHC-CcccCccccCeEEECCCCcEEEccccceeecCCCCce
Confidence 9999999999986 46789999999999999999999999 99999999999999999999999999853
Q ss_pred --------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcc
Q 045127 384 --------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTEN 443 (508)
Q Consensus 384 --------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 443 (508)
.++.++|||||||++|||++|..|+..... ...+.+.+..... ....
T Consensus 172 ~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~-~~~~~~~i~~~~~----------~~~~-- 238 (287)
T d1opja_ 172 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID-LSQVYELLEKDYR----------MERP-- 238 (287)
T ss_dssp EETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCC-HHHHHHHHHTTCC----------CCCC--
T ss_pred eeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcch-HHHHHHHHhcCCC----------CCCC--
Confidence 456689999999999999998777643221 1112222221111 1111
Q ss_pred hHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhh
Q 045127 444 MFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKS 482 (508)
Q Consensus 444 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 482 (508)
......+.+++.+||+.||++|||++||++.|+.+.+.
T Consensus 239 -~~~~~~l~~li~~cl~~dP~~Rps~~ei~~~L~~~~~~ 276 (287)
T d1opja_ 239 -EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 276 (287)
T ss_dssp -TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTSS
T ss_pred -ccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHh
Confidence 11245678899999999999999999999999887543
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9e-47 Score=363.86 Aligned_cols=228 Identities=19% Similarity=0.317 Sum_probs=185.1
Q ss_pred hcCCCCCceeeecCCeEEEEEEECCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEee
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEW 316 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 316 (508)
.++|+..+.||+|+||.||+|.+++++.||||+++.... ..+.|.+|++++++++|||||+++|++.+ +..++||||
T Consensus 12 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~--~~~~~~~E~~~l~~l~HpnIv~~~g~~~~-~~~~iv~Ey 88 (272)
T d1qpca_ 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM--SPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEY 88 (272)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSS--CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred HHHeEEeEEEecCCCcEEEEEEECCCCEEEEEEEccCcC--CHHHHHHHHHHHHhCCCCCEeEEEeeecc-CCeEEEEEe
Confidence 357888899999999999999998888999999975433 35679999999999999999999998754 567999999
Q ss_pred cCCCCHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC----------
Q 045127 317 TNGGNVELWLS---ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY---------- 383 (508)
Q Consensus 317 ~~~gsL~~~l~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~---------- 383 (508)
+++|+|.+++. ...+++.++.+|+.||++||+|||++ +|+||||||+|||+++++.+||+|||+++
T Consensus 89 ~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~-~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~~~~~ 167 (272)
T d1qpca_ 89 MENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER-NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAR 167 (272)
T ss_dssp CTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECC
T ss_pred CCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCccchhheeeecccceeeccccceEEccCCccccc
Confidence 99999999887 34699999999999999999999999 99999999999999999999999999852
Q ss_pred ------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchH
Q 045127 384 ------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMF 445 (508)
Q Consensus 384 ------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 445 (508)
.++.++|||||||++|||+||..|+...... ..+...+.... .+.. +.
T Consensus 168 ~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~-~~~~~~i~~~~--------~~~~--p~--- 233 (272)
T d1qpca_ 168 EGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN-PEVIQNLERGY--------RMVR--PD--- 233 (272)
T ss_dssp TTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCH-HHHHHHHHTTC--------CCCC--CT---
T ss_pred cccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCH-HHHHHHHHhcC--------CCCC--cc---
Confidence 3456899999999999999976655432211 11222221111 0101 11
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhh
Q 045127 446 DQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKS 482 (508)
Q Consensus 446 ~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 482 (508)
.....+.+++.+||+.||++||||+||++.|+++..+
T Consensus 234 ~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~~fts 270 (272)
T d1qpca_ 234 NCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 270 (272)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cChHHHHHHHHHHcCCCHhHCcCHHHHHHHhhhhhhc
Confidence 1234678899999999999999999999999988654
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-46 Score=359.26 Aligned_cols=224 Identities=21% Similarity=0.324 Sum_probs=188.8
Q ss_pred cCCCCCceeeecCCeEEEEEEECCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEeec
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWT 317 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 317 (508)
++|+..+.||+|+||+||+|++++++.||||+++.... ..++|.+|+.++++++||||++++|++.+++..++||||+
T Consensus 4 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~--~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~ 81 (258)
T d1k2pa_ 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM--SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM 81 (258)
T ss_dssp CCCCCCCCCCEETTEEEEEEEETTTEEEEEEEEESSSS--CHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECC
T ss_pred HHCEEeEEEecCCCeEEEEEEECCCCEEEEEEECcCcC--CHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEcc
Confidence 57899999999999999999998888999999975443 3468999999999999999999999999999999999999
Q ss_pred CCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC------------
Q 045127 318 NGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------------ 383 (508)
Q Consensus 318 ~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------------ 383 (508)
++|+|.+++. ...+++..+.+++.|+++||+|||++ ||+||||||+||+++.++.+||+|||++.
T Consensus 82 ~~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~~-~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~ 160 (258)
T d1k2pa_ 82 ANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK-QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVG 160 (258)
T ss_dssp TTEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT-TBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSCCCCCC
T ss_pred CCCcHHHhhhccccCCcHHHHHHHHHHHHHHHHHHhhc-CcccccccceeEEEcCCCcEEECcchhheeccCCCceeecc
Confidence 9999999976 56789999999999999999999999 99999999999999999999999999852
Q ss_pred ----------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHH
Q 045127 384 ----------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFD 446 (508)
Q Consensus 384 ----------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 446 (508)
.++.++|||||||++|||+| |+.||......+ +...+..... +..+ ..
T Consensus 161 ~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~--~~~~i~~~~~----------~~~p---~~ 225 (258)
T d1k2pa_ 161 SKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE--TAEHIAQGLR----------LYRP---HL 225 (258)
T ss_dssp SCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHH--HHHHHHTTCC----------CCCC---TT
T ss_pred cCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHHH--HHHHHHhCCC----------CCCc---cc
Confidence 34568999999999999998 899997654221 2211211111 1111 11
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHH
Q 045127 447 QAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRA 479 (508)
Q Consensus 447 ~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i 479 (508)
....+.+++.+||+.||++|||++||++.|.++
T Consensus 226 ~~~~l~~li~~cl~~dP~~RPt~~eil~~L~di 258 (258)
T d1k2pa_ 226 ASEKVYTIMYSCWHEKADERPTFKILLSNILDV 258 (258)
T ss_dssp CCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHCC
T ss_pred ccHHHHHHHHHHccCCHhHCcCHHHHHHHhhCC
Confidence 235678899999999999999999999998653
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-46 Score=364.54 Aligned_cols=230 Identities=18% Similarity=0.284 Sum_probs=188.3
Q ss_pred cCCCCCc-eeeecCCeEEEEEEEC---CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEE
Q 045127 238 NGFSKKN-LVGKNEGAAIYKGILR---DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIV 313 (508)
Q Consensus 238 ~~~~~~~-~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 313 (508)
++|...+ +||+|+||.||+|.++ ++..||||+++........++|.+|++++++++|||||+++|++.+ +..++|
T Consensus 8 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~~lv 86 (285)
T d1u59a_ 8 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLV 86 (285)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEE
T ss_pred cCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc-CeEEEE
Confidence 3455556 4999999999999874 3557999999877666678899999999999999999999999875 457899
Q ss_pred EeecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC--------
Q 045127 314 TEWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY-------- 383 (508)
Q Consensus 314 ~e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~-------- 383 (508)
||||++|+|.+++. ...+++.++..++.||++||+|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 87 mE~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~~-~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~ 165 (285)
T d1u59a_ 87 MEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK-NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSY 165 (285)
T ss_dssp EECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCE
T ss_pred EEeCCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHhC-CeecCcCchhheeeccCCceeeccchhhhcccccccc
Confidence 99999999999976 46799999999999999999999999 99999999999999999999999999752
Q ss_pred ----------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhcccC
Q 045127 384 ----------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMML 440 (508)
Q Consensus 384 ----------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 440 (508)
.++.++|||||||++|||+| |+.||...... .+...+...... ..
T Consensus 166 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~--~~~~~i~~~~~~----------~~ 233 (285)
T d1u59a_ 166 YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP--EVMAFIEQGKRM----------EC 233 (285)
T ss_dssp ECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH--HHHHHHHTTCCC----------CC
T ss_pred cccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCCCC----------CC
Confidence 23567899999999999998 99999864322 222222221111 11
Q ss_pred CcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhCC
Q 045127 441 TENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSCP 484 (508)
Q Consensus 441 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 484 (508)
+ ......+.+++.+||+.||++|||+.+|.+.|+.+..+..
T Consensus 234 p---~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~~~~~~ 274 (285)
T d1u59a_ 234 P---PECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLA 274 (285)
T ss_dssp C---TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred C---CcCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHhh
Confidence 1 1124567789999999999999999999999998876543
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-46 Score=365.64 Aligned_cols=223 Identities=13% Similarity=0.159 Sum_probs=185.2
Q ss_pred cCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEee
Q 045127 238 NGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEW 316 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 316 (508)
++|+..+.||+|+||+||+|.. .+|+.||||+++..... ..+.+.+|++++++++||||+++++++.+++..|+||||
T Consensus 20 ~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy 98 (293)
T d1yhwa1 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP-KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (293)
T ss_dssp TTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCS-CHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccCh-HHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEe
Confidence 4799999999999999999997 57999999998643322 356799999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC--------------
Q 045127 317 TNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE-------------- 382 (508)
Q Consensus 317 ~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~-------------- 382 (508)
|++|+|.+++....+++.++..++.||+.||+|||++ ||+||||||+|||++.++.+||+|||++
T Consensus 99 ~~gg~L~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~-~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~ 177 (293)
T d1yhwa1 99 LAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSN-QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV 177 (293)
T ss_dssp CTTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBCCCC
T ss_pred cCCCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHC-CCcccCCcHHHeEECCCCcEeeccchhheeeccccccccccc
Confidence 9999999999888899999999999999999999999 9999999999999999999999999874
Q ss_pred -------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHHH
Q 045127 383 -------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQAE 449 (508)
Q Consensus 383 -------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 449 (508)
..++.++|||||||++|||+||+.||....... .+........ +.+... .....
T Consensus 178 gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~-~~~~~~~~~~---------~~~~~~---~~~s~ 244 (293)
T d1yhwa1 178 GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR-ALYLIATNGT---------PELQNP---EKLSA 244 (293)
T ss_dssp SCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHHHHCS---------CCCSSG---GGSCH
T ss_pred cCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHH-HHHHHHhCCC---------CCCCCc---ccCCH
Confidence 245778999999999999999999997432211 1111111110 011111 11235
Q ss_pred HHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 450 QGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 450 ~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
.+.+++.+||+.||++|||++|+++.
T Consensus 245 ~~~~li~~~L~~dP~~R~s~~eil~H 270 (293)
T d1yhwa1 245 IFRDFLNRCLDMDVEKRGSAKELLQH 270 (293)
T ss_dssp HHHHHHHHHTCSSTTTSCCHHHHTTC
T ss_pred HHHHHHHHHccCChhHCcCHHHHhcC
Confidence 57789999999999999999999763
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.5e-46 Score=364.69 Aligned_cols=222 Identities=16% Similarity=0.213 Sum_probs=184.0
Q ss_pred cCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEee
Q 045127 238 NGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEW 316 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 316 (508)
+.|+..+.||+|+||.||+|++ .+++.||||+++.... ...+.+.+|++++++++|||||++++++.+++..++||||
T Consensus 12 d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy 90 (288)
T d2jfla1 12 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSE-EELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEF 90 (288)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSS-GGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCH-HHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEec
Confidence 4688899999999999999997 4689999999965433 3567889999999999999999999999999999999999
Q ss_pred cCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC------------
Q 045127 317 TNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE------------ 382 (508)
Q Consensus 317 ~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~------------ 382 (508)
|++|+|.+++. ...+++.++..++.||+.||+|||++ ||+||||||+|||++.++.+||+|||++
T Consensus 91 ~~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~~-~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~~~~~~ 169 (288)
T d2jfla1 91 CAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN-KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDS 169 (288)
T ss_dssp CTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTSCEEECCCTTCEECHHHHHHHTC
T ss_pred CCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CEEEeecChhheeECCCCCEEEEechhhhccCCCcccccc
Confidence 99999999876 56799999999999999999999999 9999999999999999999999999874
Q ss_pred --------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCc
Q 045127 383 --------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTE 442 (508)
Q Consensus 383 --------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 442 (508)
..++.++|||||||++|||+||+.||....... ....+....+ +.+...
T Consensus 170 ~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~--~~~~i~~~~~--------~~~~~~- 238 (288)
T d2jfla1 170 FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMR--VLLKIAKSEP--------PTLAQP- 238 (288)
T ss_dssp CCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGG--HHHHHHHSCC--------CCCSSG-
T ss_pred cccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHH--HHHHHHcCCC--------CCCCcc-
Confidence 224678999999999999999999997543222 1111111110 011111
Q ss_pred chHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 443 NMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 443 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
......+.+++.+||+.||++|||++|+++
T Consensus 239 --~~~s~~~~~li~~~L~~dp~~R~t~~ell~ 268 (288)
T d2jfla1 239 --SRWSSNFKDFLKKCLEKNVDARWTTSQLLQ 268 (288)
T ss_dssp --GGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred --ccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 112456778899999999999999999976
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.5e-46 Score=358.36 Aligned_cols=220 Identities=15% Similarity=0.217 Sum_probs=183.5
Q ss_pred cCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCC--HHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEE
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVS--REIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVT 314 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 314 (508)
++|+..+.||+|+||.||+|+.. +++.||+|++..... ....+.+.+|++++++++||||+++++++.+++..++||
T Consensus 6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivm 85 (263)
T d2j4za1 6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLIL 85 (263)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEE
Confidence 57889999999999999999984 689999999863221 123567899999999999999999999999999999999
Q ss_pred eecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC-----------
Q 045127 315 EWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE----------- 382 (508)
Q Consensus 315 e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~----------- 382 (508)
|||++|+|.+++. ...+++..+..++.||+.||+|||++ ||+||||||+|||++.++.+||+|||++
T Consensus 86 Ey~~~g~L~~~l~~~~~l~e~~~~~i~~qi~~al~~lH~~-~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~ 164 (263)
T d2j4za1 86 EYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL 164 (263)
T ss_dssp ECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTSCEEECCCCSCSCCCCCCCEET
T ss_pred eecCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeeeeccccceecCCCCEeecccceeeecCCCccccc
Confidence 9999999999998 57899999999999999999999999 9999999999999999999999999984
Q ss_pred --------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHH
Q 045127 383 --------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQA 448 (508)
Q Consensus 383 --------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 448 (508)
..++.++|||||||++|||++|+.||...... +.... +.......+. ...
T Consensus 165 ~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~-----~~~~~--------i~~~~~~~p~---~~s 228 (263)
T d2j4za1 165 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ-----ETYKR--------ISRVEFTFPD---FVT 228 (263)
T ss_dssp TEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHH-----HHHHH--------HHTTCCCCCT---TSC
T ss_pred CCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHH-----HHHHH--------HHcCCCCCCc---cCC
Confidence 34678999999999999999999999743211 11111 1111111111 123
Q ss_pred HHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 449 EQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 449 ~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
..+.+++.+||+.||++|||++|+++
T Consensus 229 ~~~~~li~~~L~~dp~~R~t~~eil~ 254 (263)
T d2j4za1 229 EGARDLISRLLKHNPSQRPMLREVLE 254 (263)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHHHccCCHhHCcCHHHHHc
Confidence 45678899999999999999999987
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9e-46 Score=359.04 Aligned_cols=230 Identities=22% Similarity=0.362 Sum_probs=188.6
Q ss_pred cCCCCCceeeecCCeEEEEEEECCC-----CEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEE
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILRDG-----TRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAI 312 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 312 (508)
+.|+..++||+|+||.||+|.+++. ..||||+++.........+|.+|++++++++|||||+++|++.+.+..++
T Consensus 7 ~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~~ 86 (283)
T d1mqba_ 7 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI 86 (283)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceEE
Confidence 4577889999999999999997532 47999999877777677789999999999999999999999999999999
Q ss_pred EEeecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-------
Q 045127 313 VTEWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------- 383 (508)
Q Consensus 313 v~e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------- 383 (508)
||||+.+|++.+++. ...+++.++..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++
T Consensus 87 v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~~-~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~ 165 (283)
T d1mqba_ 87 ITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANM-NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE 165 (283)
T ss_dssp EEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTCCEEECCCCC---------
T ss_pred EEEecccCcchhhhhcccccccHHHHHHHHHHHHHhhhhcccc-ccccCccccceEEECCCCeEEEcccchhhcccCCCc
Confidence 999999999999886 46799999999999999999999999 99999999999999999999999999852
Q ss_pred -----------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccC
Q 045127 384 -----------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMML 440 (508)
Q Consensus 384 -----------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 440 (508)
.++.++|||||||++|||++|..|+...... ..+...+..... +..
T Consensus 166 ~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~-~~~~~~i~~~~~--------~~~-- 234 (283)
T d1mqba_ 166 ATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN-HEVMKAINDGFR--------LPT-- 234 (283)
T ss_dssp --------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH-HHHHHHHHTTCC--------CCC--
T ss_pred cceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCH-HHHHHHHhccCC--------CCC--
Confidence 3456799999999999999976665432211 112222211111 111
Q ss_pred CcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhh
Q 045127 441 TENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKS 482 (508)
Q Consensus 441 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 482 (508)
. ......+.+++.+||+.||++||||.||++.|+++.+.
T Consensus 235 ~---~~~~~~l~~li~~cl~~~p~~RPt~~eil~~L~~l~~~ 273 (283)
T d1mqba_ 235 P---MDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRA 273 (283)
T ss_dssp C---TTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred c---hhhHHHHHHHHHHHCcCCHhHCcCHHHHHHHHHHHhhC
Confidence 1 12245678899999999999999999999999998764
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.6e-46 Score=368.51 Aligned_cols=243 Identities=18% Similarity=0.219 Sum_probs=191.4
Q ss_pred hhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEE
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVT 314 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 314 (508)
..++|+..+.||+|+||+||+|+. .+|+.||+|+++.........++.+|+.++++++|||||++++++.++...++||
T Consensus 4 ~~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVm 83 (322)
T d1s9ja_ 4 KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM 83 (322)
T ss_dssp CGGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 457899999999999999999997 5689999999976655556788999999999999999999999999999999999
Q ss_pred eecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhh-CCCccccCCCCCCEEecCCCceEEeeccCC----------
Q 045127 315 EWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQE-QWPEVDYDLRTGSVLLTDNLEPLISRFKIE---------- 382 (508)
Q Consensus 315 e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~-~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~---------- 382 (508)
||+++|+|.+++. ...+++..+..++.|++.||.|||+ + ||+||||||+|||++.++.+||+|||++
T Consensus 84 Ey~~gg~L~~~l~~~~~l~~~~~~~~~~qil~aL~yLH~~~-~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~~ 162 (322)
T d1s9ja_ 84 EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH-KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS 162 (322)
T ss_dssp ECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHH-CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHTC--
T ss_pred EcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhC-CEEccccCHHHeeECCCCCEEEeeCCCccccCCCcccc
Confidence 9999999999997 6689999999999999999999997 6 8999999999999999999999999974
Q ss_pred ---------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHH--HH---------------------
Q 045127 383 ---------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYI--RM--------------------- 424 (508)
Q Consensus 383 ---------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~--~~--------------------- 424 (508)
..++.++||||+||++|||++|+.||.............. ..
T Consensus 163 ~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (322)
T d1s9ja_ 163 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGM 242 (322)
T ss_dssp -CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC---------------------------
T ss_pred ccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCccccccccccccccc
Confidence 3678899999999999999999999975432211000000 00
Q ss_pred --hccchhhhhhhhcccCCc---chHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH--HHHH
Q 045127 425 --HYPENLQLVVDERMMLTE---NMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM--ITRA 479 (508)
Q Consensus 425 --~~~~~~~~~~~~~l~~~~---~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~--L~~i 479 (508)
.......+..+....... .......++.+++.+||+.||++|||++|+++. +++.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~Hpf~~~~ 304 (322)
T d1s9ja_ 243 DSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS 304 (322)
T ss_dssp ---CCCCHHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHH
T ss_pred ccccchhHHHHHhhhhccCCccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCHhhCcC
Confidence 000000111110000000 000113567889999999999999999999884 5543
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-45 Score=355.15 Aligned_cols=220 Identities=19% Similarity=0.250 Sum_probs=177.2
Q ss_pred CCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCC-CHHHHHHHHHHHHHHhhcCCCCccceeeEEec----CCeeEEEE
Q 045127 241 SKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDV-SREIRDEFVEECKLLVQFQHKNLIRVLGWNNS----RRTRAIVT 314 (508)
Q Consensus 241 ~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~----~~~~~lv~ 314 (508)
+..++||+|+||+||+|.+. +++.||+|.+.... .....+.+.+|++++++++||||+++++++.+ +...++||
T Consensus 12 ~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~ivm 91 (270)
T d1t4ha_ 12 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 91 (270)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEEE
Confidence 44568999999999999974 68899999986443 44557789999999999999999999999864 34579999
Q ss_pred eecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCC--ccccCCCCCCEEec-CCCceEEeeccCC--------
Q 045127 315 EWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWP--EVDYDLRTGSVLLT-DNLEPLISRFKIE-------- 382 (508)
Q Consensus 315 e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~--iiH~Dlkp~NIll~-~~~~~kl~Dfg~~-------- 382 (508)
||+++|+|.+++. ...+++.++..++.||++||+|||++ + |+||||||+|||++ +++.+||+|||++
T Consensus 92 E~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~gl~yLH~~-~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~~~~ 170 (270)
T d1t4ha_ 92 ELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFA 170 (270)
T ss_dssp ECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTTSB
T ss_pred eCCCCCcHHHHHhccccccHHHHHHHHHHHHHHHHHHHHC-CCCEEeCCcChhhceeeCCCCCEEEeecCcceeccCCcc
Confidence 9999999999997 57899999999999999999999999 8 99999999999997 5789999999874
Q ss_pred ----------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHH
Q 045127 383 ----------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFD 446 (508)
Q Consensus 383 ----------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 446 (508)
..++.++|||||||++|||++|+.||....... .+...+..... ...++. .
T Consensus 171 ~~~~GT~~Y~aPE~~~~~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~-~~~~~i~~~~~---~~~~~~---------~ 237 (270)
T d1t4ha_ 171 KAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAA-QIYRRVTSGVK---PASFDK---------V 237 (270)
T ss_dssp EESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHH-HHHHHHTTTCC---CGGGGG---------C
T ss_pred CCcccCccccCHHHhCCCCCCcCchhhHHHHHHHHHHCCCCCCCcccHH-HHHHHHHcCCC---CcccCc---------c
Confidence 246788999999999999999999997433211 11111111110 000111 1
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 447 QAEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 447 ~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
...++.+++.+||+.||++|||++|+++
T Consensus 238 ~~~~~~~li~~~l~~dp~~R~s~~ell~ 265 (270)
T d1t4ha_ 238 AIPEVKEIIEGCIRQNKDERYSIKDLLN 265 (270)
T ss_dssp CCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCHHHHHHHHHHccCCHhHCcCHHHHhC
Confidence 1335678999999999999999999976
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.2e-46 Score=356.09 Aligned_cols=222 Identities=16% Similarity=0.193 Sum_probs=176.2
Q ss_pred hcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCC-CHHHHHHHHHHHHHHhhcCCCCccceeeEEec--CCeeEE
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDV-SREIRDEFVEECKLLVQFQHKNLIRVLGWNNS--RRTRAI 312 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~~~l 312 (508)
.++|+..+.||+|+||+||+|+. .+|+.||||.+.... .....+.+.+|++++++++||||+++++++.+ ....|+
T Consensus 3 ~edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~i 82 (269)
T d2java1 3 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 82 (269)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEE
T ss_pred chhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEE
Confidence 36799999999999999999997 468999999996543 44557789999999999999999999999865 456799
Q ss_pred EEeecCCCCHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHhhCCC-----ccccCCCCCCEEecCCCceEEeeccCC
Q 045127 313 VTEWTNGGNVELWLS-----ESAPSWKHRLKVLIGVVEAMCYLQEQWP-----EVDYDLRTGSVLLTDNLEPLISRFKIE 382 (508)
Q Consensus 313 v~e~~~~gsL~~~l~-----~~~l~~~~~~~i~~~i~~~L~~LH~~~~-----iiH~Dlkp~NIll~~~~~~kl~Dfg~~ 382 (508)
|||||++|+|.+++. ...+++..+..++.|++.||+|||++ + |+||||||+|||++.++.+||+|||++
T Consensus 83 vmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~-~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a 161 (269)
T d2java1 83 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR-SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA 161 (269)
T ss_dssp EEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHH-CC---------CCGGGEEECTTSCEEECCHHHH
T ss_pred EEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHh-cCCCCCEEeCcCchhhcCcCCCCcEEEeeccce
Confidence 999999999999986 46799999999999999999999997 5 999999999999999999999999763
Q ss_pred ---------------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhh
Q 045127 383 ---------------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVD 435 (508)
Q Consensus 383 ---------------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (508)
..++.++|||||||++|||+||+.||...... .+...+.....
T Consensus 162 ~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~--~~~~~i~~~~~-------- 231 (269)
T d2java1 162 RILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK--ELAGKIREGKF-------- 231 (269)
T ss_dssp HHC-----------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHHTCC--------
T ss_pred eecccCCCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHH--HHHHHHHcCCC--------
Confidence 34677899999999999999999999753321 11111111110
Q ss_pred hcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 436 ERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 436 ~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
+.+. . ....++.+++.+||+.||++|||++|+++
T Consensus 232 ~~~~--~---~~s~~l~~li~~~L~~dp~~Rps~~ell~ 265 (269)
T d2java1 232 RRIP--Y---RYSDELNEIITRMLNLKDYHRPSVEEILE 265 (269)
T ss_dssp CCCC--T---TSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CCCC--c---ccCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence 0010 0 12345778899999999999999999975
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.5e-45 Score=355.90 Aligned_cols=221 Identities=19% Similarity=0.302 Sum_probs=178.8
Q ss_pred ceeeecCCeEEEEEEECC---CCEEEEEEecCCC-CHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEeecCC
Q 045127 244 NLVGKNEGAAIYKGILRD---GTRVKIEIYKGDV-SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWTNG 319 (508)
Q Consensus 244 ~~lg~G~~g~V~~~~~~~---~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 319 (508)
++||+|+||+||+|.+++ ++.||||+++... .....++|.+|++++++++|||||+++|++.++ ..++||||+++
T Consensus 13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~~-~~~lvmE~~~~ 91 (277)
T d1xbba_ 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAE-SWMLVMEMAEL 91 (277)
T ss_dssp EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEESS-SEEEEEECCTT
T ss_pred CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEeccC-CEEEEEEcCCC
Confidence 579999999999998743 4689999996443 234567899999999999999999999998654 57899999999
Q ss_pred CCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC---------------
Q 045127 320 GNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY--------------- 383 (508)
Q Consensus 320 gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~--------------- 383 (508)
|+|.+++. ...+++.++..|+.||+.||+|||++ +|+||||||+|||++.++.+|++|||+++
T Consensus 92 g~L~~~l~~~~~l~~~~~~~i~~qi~~gl~ylH~~-~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~~~ 170 (277)
T d1xbba_ 92 GPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES-NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 170 (277)
T ss_dssp EEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC----
T ss_pred CcHHHHHhhccCCCHHHHHHHHHHHHHHHhhHHhC-CcccCCCcchhhcccccCcccccchhhhhhcccccccccccccc
Confidence 99999998 57799999999999999999999999 99999999999999999999999999852
Q ss_pred ---------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHH
Q 045127 384 ---------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQ 447 (508)
Q Consensus 384 ---------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 447 (508)
.++.++|||||||++|||+| |+.||.+.... .+...+.... ++..+. ..
T Consensus 171 ~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~--~~~~~i~~~~----------~~~~p~---~~ 235 (277)
T d1xbba_ 171 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS--EVTAMLEKGE----------RMGCPA---GC 235 (277)
T ss_dssp CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HHHHHHHTTC----------CCCCCT---TC
T ss_pred CCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHH--HHHHHHHcCC----------CCCCCc---cc
Confidence 23457899999999999998 89999754321 1222222111 111111 12
Q ss_pred HHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHh
Q 045127 448 AEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYK 481 (508)
Q Consensus 448 ~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~ 481 (508)
...+.+++.+||+.||++|||+++|.+.|+....
T Consensus 236 ~~~~~~li~~cl~~dp~~RPs~~~i~~~L~~~~~ 269 (277)
T d1xbba_ 236 PREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 269 (277)
T ss_dssp CHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCHhHCcCHHHHHHHhhCHHh
Confidence 4567789999999999999999999999887643
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.9e-45 Score=356.16 Aligned_cols=228 Identities=18% Similarity=0.267 Sum_probs=186.6
Q ss_pred cCCCCCceeeecCCeEEEEEEECCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEeec
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEWT 317 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 317 (508)
++|+..+.||+|+||.||+|++++++.||||+++.... ..+.|.+|+.++++++|||||+++|++.+ +..++||||+
T Consensus 17 ~~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~~--~~~~~~~E~~~l~~l~h~nIv~~~g~~~~-~~~~lv~Ey~ 93 (285)
T d1fmka3 17 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM--SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM 93 (285)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSS--CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCC
T ss_pred HHEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECcccC--CHHHHHHHHHHHHhcccCCEeEEEEEEec-CCeEEEEEec
Confidence 57889999999999999999998888999999965433 34679999999999999999999999854 5678999999
Q ss_pred CCCCHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-----------
Q 045127 318 NGGNVELWLS---ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY----------- 383 (508)
Q Consensus 318 ~~gsL~~~l~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~----------- 383 (508)
++|+|..++. ...+++.++..++.||+.||+|||++ +|+||||||+|||++.++++||+|||+++
T Consensus 94 ~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~-~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~ 172 (285)
T d1fmka3 94 SKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM-NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 172 (285)
T ss_dssp TTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECGGGCEEECCCCTTC-----------
T ss_pred CCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhh-heecccccceEEEECCCCcEEEcccchhhhccCCCceeec
Confidence 9999999987 46799999999999999999999999 99999999999999999999999999852
Q ss_pred -----------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHH
Q 045127 384 -----------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFD 446 (508)
Q Consensus 384 -----------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 446 (508)
.++.++|||||||++|||+||..|+...... ..+...+..... ... . ..
T Consensus 173 ~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~-~~~~~~i~~~~~--------~~~--~---~~ 238 (285)
T d1fmka3 173 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN-REVLDQVERGYR--------MPC--P---PE 238 (285)
T ss_dssp ---CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH-HHHHHHHHTTCC--------CCC--C---TT
T ss_pred cccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCH-HHHHHHHHhcCC--------CCC--C---cc
Confidence 3456899999999999999976665432221 112222221111 001 1 12
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhC
Q 045127 447 QAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSC 483 (508)
Q Consensus 447 ~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 483 (508)
...++.+++.+||+.||++|||+++|+++|+......
T Consensus 239 ~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~~~~ 275 (285)
T d1fmka3 239 CPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 275 (285)
T ss_dssp SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCS
T ss_pred cCHHHHHHHHHHcccCHhHCcCHHHHHHHHhhhhcCC
Confidence 2456788999999999999999999999998876543
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-45 Score=364.79 Aligned_cols=225 Identities=18% Similarity=0.270 Sum_probs=182.2
Q ss_pred cCCCCCceeeecCCeEEEEEEECC-C-----CEEEEEEecCCCCHHHHHHHHHHHHHHhhc-CCCCccceeeEEecCCee
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILRD-G-----TRVKIEIYKGDVSREIRDEFVEECKLLVQF-QHKNLIRVLGWNNSRRTR 310 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~~-~-----~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 310 (508)
++|+..+.||+|+||+||+|++.. + ..||+|.+...........+.+|+.++.++ +|||||++++++.+.+..
T Consensus 37 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~ 116 (325)
T d1rjba_ 37 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPI 116 (325)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCCeE
Confidence 578888999999999999999742 2 369999997655555667899999999998 899999999999999999
Q ss_pred EEEEeecCCCCHHHHhcc------------------------CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCE
Q 045127 311 AIVTEWTNGGNVELWLSE------------------------SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSV 366 (508)
Q Consensus 311 ~lv~e~~~~gsL~~~l~~------------------------~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NI 366 (508)
++|||||++|+|.+++.. ..+++..+..++.||++||+|||++ +|+||||||+||
T Consensus 117 ~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~-~IiHRDlKp~Ni 195 (325)
T d1rjba_ 117 YLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK-SCVHRDLAARNV 195 (325)
T ss_dssp EEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT-TEEETTCSGGGE
T ss_pred EEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC-CeeeccCchhcc
Confidence 999999999999999962 2479999999999999999999999 999999999999
Q ss_pred EecCCCceEEeeccCC-----------------------------CCCCCcchhhHHHHHHHHHHh-CCCCCcccccCcc
Q 045127 367 LLTDNLEPLISRFKIE-----------------------------YQHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEA 416 (508)
Q Consensus 367 ll~~~~~~kl~Dfg~~-----------------------------~~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~ 416 (508)
+++.++.+||+|||++ ..++.++|||||||++|||+| |+.||.+.....
T Consensus 196 ll~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~~- 274 (325)
T d1rjba_ 196 LVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDA- 274 (325)
T ss_dssp EEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH-
T ss_pred ccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCCHHH-
Confidence 9999999999999985 245678999999999999998 899997544322
Q ss_pred cHHHHHHHhccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHH
Q 045127 417 GFIEYIRMHYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMIT 477 (508)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~ 477 (508)
.+...+..... +..+ ......+.+++.+||+.||++|||++||+++|.
T Consensus 275 ~~~~~~~~~~~----------~~~p---~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~ 322 (325)
T d1rjba_ 275 NFYKLIQNGFK----------MDQP---FYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG 322 (325)
T ss_dssp HHHHHHHTTCC----------CCCC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHhcCCC----------CCCC---CcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHh
Confidence 22222222111 1111 112456788999999999999999999999985
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.5e-45 Score=361.10 Aligned_cols=222 Identities=17% Similarity=0.199 Sum_probs=182.7
Q ss_pred cCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCC--HHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEE
Q 045127 238 NGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVS--REIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVT 314 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 314 (508)
+.|+..+.||+|+||.||+|+. .+|+.||||+++.... ....+.+.+|++++++++|||||++++++.+++..|+||
T Consensus 15 ~~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~ 94 (309)
T d1u5ra_ 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 94 (309)
T ss_dssp HHEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred HhcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEE
Confidence 3488899999999999999997 5689999999975432 334577999999999999999999999999999999999
Q ss_pred eecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC----------
Q 045127 315 EWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY---------- 383 (508)
Q Consensus 315 e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~---------- 383 (508)
|||++|+|..++. ...+++.++..++.||+.||+|||++ ||+||||||+|||++.++.+||+|||++.
T Consensus 95 E~~~~g~l~~~~~~~~~l~e~~~~~i~~qi~~aL~yLH~~-~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~G 173 (309)
T d1u5ra_ 95 EYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH-NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFVG 173 (309)
T ss_dssp ECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCCCCS
T ss_pred EecCCCchHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhC-CEeccCCCcceEEECCCCCEEEeecccccccCCCCcccc
Confidence 9999999987765 67899999999999999999999999 99999999999999999999999998742
Q ss_pred ----------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHH
Q 045127 384 ----------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQ 447 (508)
Q Consensus 384 ----------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 447 (508)
.++.++|||||||++|||++|+.||.+..... .+....... .+.+.. ...
T Consensus 174 T~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~-----~~~~i~~~~-----~~~~~~----~~~ 239 (309)
T d1u5ra_ 174 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-----ALYHIAQNE-----SPALQS----GHW 239 (309)
T ss_dssp CGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-----HHHHHHHSC-----CCCCSC----TTS
T ss_pred CccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHH-----HHHHHHhCC-----CCCCCC----CCC
Confidence 36778999999999999999999997432111 111110000 011111 012
Q ss_pred HHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 448 AEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 448 ~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
...+.+++.+||+.||++|||++|+++
T Consensus 240 s~~~~~li~~~L~~dP~~Rpt~~ell~ 266 (309)
T d1u5ra_ 240 SEYFRNFVDSCLQKIPQDRPTSEVLLK 266 (309)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CHHHHHHHHHHCcCChhHCcCHHHHHh
Confidence 346778999999999999999999976
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=2.5e-45 Score=359.19 Aligned_cols=235 Identities=20% Similarity=0.307 Sum_probs=193.4
Q ss_pred HHHHHhhcCCCCCceeeecCCeEEEEEEEC------CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEE
Q 045127 231 WMLKAATNGFSKKNLVGKNEGAAIYKGILR------DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWN 304 (508)
Q Consensus 231 ~~l~~~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~ 304 (508)
.+++...++|+..+.||+|+||+||+|++. +++.||||+++.....+..++|.+|++++++++||||+++++++
T Consensus 6 ~~~e~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~ 85 (301)
T d1lufa_ 6 LSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVC 85 (301)
T ss_dssp HHTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred hhccCCHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeee
Confidence 344455678999999999999999999973 35789999998766666778899999999999999999999999
Q ss_pred ecCCeeEEEEeecCCCCHHHHhcc-------------------------CCCCHHHHHHHHHHHHHHHHHHhhCCCcccc
Q 045127 305 NSRRTRAIVTEWTNGGNVELWLSE-------------------------SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDY 359 (508)
Q Consensus 305 ~~~~~~~lv~e~~~~gsL~~~l~~-------------------------~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~ 359 (508)
......+++|||+++|+|.+++.. ..+++..+..|+.|++.||+|||++ +|+||
T Consensus 86 ~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~-~ivHr 164 (301)
T d1lufa_ 86 AVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER-KFVHR 164 (301)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT-TCCCS
T ss_pred ccCCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccC-CeEee
Confidence 999999999999999999999861 2478999999999999999999999 99999
Q ss_pred CCCCCCEEecCCCceEEeeccCC-----------------------------CCCCCcchhhHHHHHHHHHHhCC-CCCc
Q 045127 360 DLRTGSVLLTDNLEPLISRFKIE-----------------------------YQHRSTKYVYKFGLFLLEMITNR-RPLE 409 (508)
Q Consensus 360 Dlkp~NIll~~~~~~kl~Dfg~~-----------------------------~~~~~~~Dv~SlGvil~elltg~-~P~~ 409 (508)
||||+|||++.++.+||+|||++ ..++.++|||||||++|||++|. .||.
T Consensus 165 DlKp~NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~ 244 (301)
T d1lufa_ 165 DLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYY 244 (301)
T ss_dssp CCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTT
T ss_pred EEcccceEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCC
Confidence 99999999999999999999973 24577899999999999999986 5665
Q ss_pred ccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHh
Q 045127 410 EFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYK 481 (508)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~ 481 (508)
..... .+...+..... + ..+ .....++.+++.+||+.||++||||.||+++|+++.+
T Consensus 245 ~~~~~--e~~~~v~~~~~--------~--~~p---~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~i~~ 301 (301)
T d1lufa_ 245 GMAHE--EVIYYVRDGNI--------L--ACP---ENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCE 301 (301)
T ss_dssp TSCHH--HHHHHHHTTCC--------C--CCC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred CCCHH--HHHHHHHcCCC--------C--CCC---ccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence 43221 12222211110 0 001 1123467889999999999999999999999998853
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3e-45 Score=350.59 Aligned_cols=225 Identities=23% Similarity=0.321 Sum_probs=183.6
Q ss_pred cCCCCCceeeecCCeEEEEEEECCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEec-CCeeEEEEee
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNS-RRTRAIVTEW 316 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~~~~lv~e~ 316 (508)
++|+..+.||+|+||.||+|.+. |+.||||+++... ..+.+.+|++++++++||||++++|++.+ .+..++||||
T Consensus 7 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~vAvK~i~~~~---~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey 82 (262)
T d1byga_ 7 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA---TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 82 (262)
T ss_dssp GGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC-----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred HHeEEeEEEecCCCeEEEEEEEC-CeEEEEEEECcHH---HHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEec
Confidence 46777899999999999999995 7889999996543 34679999999999999999999999865 4568999999
Q ss_pred cCCCCHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC-----------
Q 045127 317 TNGGNVELWLS---ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE----------- 382 (508)
Q Consensus 317 ~~~gsL~~~l~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~----------- 382 (508)
+++|+|.+++. ...+++..+++|+.||+.||+|||+. +|+||||||+||+++.++.+|++|||++
T Consensus 83 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~-~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~~~~~~ 161 (262)
T d1byga_ 83 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN-NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK 161 (262)
T ss_dssp CTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECTTSCEEECCCCC------------
T ss_pred cCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccC-ceeccccchHhheecCCCCEeecccccceecCCCCcccc
Confidence 99999999997 23589999999999999999999999 9999999999999999999999999874
Q ss_pred -------------CCCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHH
Q 045127 383 -------------YQHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQA 448 (508)
Q Consensus 383 -------------~~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 448 (508)
..++.++|||||||++|||+| |+.||..... ..+...+..... +.+. ....
T Consensus 162 ~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~--~~~~~~i~~~~~--------~~~~-----~~~~ 226 (262)
T d1byga_ 162 LPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL--KDVVPRVEKGYK--------MDAP-----DGCP 226 (262)
T ss_dssp CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCG--GGHHHHHTTTCC--------CCCC-----TTCC
T ss_pred ccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCH--HHHHHHHHcCCC--------CCCC-----ccCC
Confidence 345778999999999999998 6888764322 223333322111 1111 1123
Q ss_pred HHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhh
Q 045127 449 EQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKS 482 (508)
Q Consensus 449 ~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 482 (508)
.++.+++.+||+.||++|||+.|++++|++++..
T Consensus 227 ~~~~~li~~cl~~dP~~Rps~~~l~~~L~~i~~~ 260 (262)
T d1byga_ 227 PAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTH 260 (262)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHhC
Confidence 4677899999999999999999999999998653
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7e-45 Score=351.04 Aligned_cols=228 Identities=17% Similarity=0.271 Sum_probs=185.5
Q ss_pred cCCCCCceeeecCCeEEEEEEECC----CCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEE
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILRD----GTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIV 313 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 313 (508)
++|+..+.||+|+||.||+|.+.. +..||||.++........+.+.+|++++++++||||+++++++. .+..++|
T Consensus 7 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~iv 85 (273)
T d1mp8a_ 7 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWII 85 (273)
T ss_dssp GGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEEE
T ss_pred HHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCeEEEE
Confidence 578888999999999999998742 35689999976666667788999999999999999999999986 4678999
Q ss_pred EeecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC--------
Q 045127 314 TEWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY-------- 383 (508)
Q Consensus 314 ~e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~-------- 383 (508)
|||+++|+|.+++. ...+++..+..++.||++||+|||++ +|+||||||+||+++.++.+||+|||++.
T Consensus 86 ~E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~-~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~~~~~ 164 (273)
T d1mp8a_ 86 MELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK-RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY 164 (273)
T ss_dssp EECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEEEETTEEEECC-------------
T ss_pred EEeccCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhccc-CeeccccchhheeecCCCcEEEccchhheeccCCcce
Confidence 99999999999876 55789999999999999999999999 99999999999999999999999998742
Q ss_pred --------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCc
Q 045127 384 --------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTE 442 (508)
Q Consensus 384 --------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 442 (508)
.++.++|||||||++|||+| |..||......+ +...+...... ...
T Consensus 165 ~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~--~~~~i~~~~~~----------~~~- 231 (273)
T d1mp8a_ 165 KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND--VIGRIENGERL----------PMP- 231 (273)
T ss_dssp ------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--HHHHHHTTCCC----------CCC-
T ss_pred eccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHHH--HHHHHHcCCCC----------CCC-
Confidence 44568899999999999998 899987544322 22222221110 011
Q ss_pred chHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhh
Q 045127 443 NMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKS 482 (508)
Q Consensus 443 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 482 (508)
......+.+++.+||+.||++|||++||++.|+.+.+.
T Consensus 232 --~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~L~~i~~~ 269 (273)
T d1mp8a_ 232 --PNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 269 (273)
T ss_dssp --TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred --CCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHH
Confidence 11245677899999999999999999999999988654
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=3.7e-45 Score=358.15 Aligned_cols=226 Identities=12% Similarity=0.140 Sum_probs=177.5
Q ss_pred hcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEe
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTE 315 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 315 (508)
.+.|+..+.||+|+||+||+|+.. +|+.||||++.........+.+.+|+.++++++||||+++++++.+++..|+|||
T Consensus 8 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE 87 (307)
T d1a06a_ 8 RDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQ 87 (307)
T ss_dssp GGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred ccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence 456899999999999999999984 6899999999765544455678899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEec---CCCceEEeeccCC---------
Q 045127 316 WTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLT---DNLEPLISRFKIE--------- 382 (508)
Q Consensus 316 ~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~---~~~~~kl~Dfg~~--------- 382 (508)
||+||+|.+++. ...+++.++..++.||+.||+|||++ ||+||||||+||+++ +++.+||+|||++
T Consensus 88 ~~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~-~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~~~~ 166 (307)
T d1a06a_ 88 LVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDL-GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVL 166 (307)
T ss_dssp CCCSCBHHHHHHTCSCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEESSSSTTCCEEECCC------------
T ss_pred ccCCCcHHHhhhcccCCCHHHHHHHHHHHHHHHHhhhhc-eeeeEEecccceeecccCCCceEEEeccceeEEccCCCee
Confidence 999999999997 66899999999999999999999999 999999999999995 5789999999874
Q ss_pred -----------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchH
Q 045127 383 -----------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMF 445 (508)
Q Consensus 383 -----------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 445 (508)
..++.++|||||||++|||++|+.||.+.... .+...+..... .+. .....
T Consensus 167 ~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~--~~~~~i~~~~~---------~~~-~~~~~ 234 (307)
T d1a06a_ 167 STACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDA--KLFEQILKAEY---------EFD-SPYWD 234 (307)
T ss_dssp ------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHTTCC---------CCC-TTTTT
T ss_pred eeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHH--HHHHHHhccCC---------CCC-Ccccc
Confidence 34678999999999999999999999753221 11111111100 000 00001
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 446 DQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 446 ~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
.....+.+++.+||+.||++|||++|+++.
T Consensus 235 ~~s~~~~~li~~~L~~dP~~R~s~~eil~h 264 (307)
T d1a06a_ 235 DISDSAKDFIRHLMEKDPEKRFTCEQALQH 264 (307)
T ss_dssp TSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred CCCHHHHHHHHHHccCCHhHCcCHHHHhcC
Confidence 123467789999999999999999999873
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.8e-44 Score=351.77 Aligned_cols=229 Identities=17% Similarity=0.276 Sum_probs=185.3
Q ss_pred CceeeecCCeEEEEEEECCC----CEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEec-CCeeEEEEeec
Q 045127 243 KNLVGKNEGAAIYKGILRDG----TRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNS-RRTRAIVTEWT 317 (508)
Q Consensus 243 ~~~lg~G~~g~V~~~~~~~~----~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~~~~lv~e~~ 317 (508)
.++||+|+||+||+|.+.++ ..||||+++........++|.+|++++++++||||++++|++.. +...++|||||
T Consensus 32 ~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~~ 111 (311)
T d1r0pa_ 32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 111 (311)
T ss_dssp EEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEECC
T ss_pred ceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEEe
Confidence 36899999999999997432 36899999766666678899999999999999999999999875 46789999999
Q ss_pred CCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC------------
Q 045127 318 NGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------------ 383 (508)
Q Consensus 318 ~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------------ 383 (508)
++|+|.+++. ....++..+++++.|+++||.|||+. +|+||||||+|||+++++.+||+|||++.
T Consensus 112 ~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH~~-~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~~~~~ 190 (311)
T d1r0pa_ 112 KHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK-KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHN 190 (311)
T ss_dssp TTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTCCCTTC
T ss_pred ecCchhhhhccccccchHHHHHHHHHHHHHhhhhhccc-CcccCCccHHhEeECCCCCEEEecccchhhcccccccccee
Confidence 9999999988 44678899999999999999999999 99999999999999999999999998742
Q ss_pred -------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcch
Q 045127 384 -------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENM 444 (508)
Q Consensus 384 -------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 444 (508)
.++.++||||||+++|||+||..||....... .+..++..... ...+.
T Consensus 191 ~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~-~~~~~i~~g~~----------~~~p~-- 257 (311)
T d1r0pa_ 191 KTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF-DITVYLLQGRR----------LLQPE-- 257 (311)
T ss_dssp TTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC-------CHHHHHTTCC----------CCCCT--
T ss_pred cccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHH-HHHHHHHcCCC----------CCCcc--
Confidence 34568899999999999999888876433221 12222221111 11111
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhCCCC
Q 045127 445 FDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSCPIL 486 (508)
Q Consensus 445 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~ 486 (508)
.....+.+++.+||+.||++||||.||++.|+++..++...
T Consensus 258 -~~~~~l~~li~~cl~~dP~~RPs~~ei~~~L~~i~~~~~~~ 298 (311)
T d1r0pa_ 258 -YCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE 298 (311)
T ss_dssp -TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCSC
T ss_pred -cCcHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHhhhhh
Confidence 12346778999999999999999999999999999876653
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.3e-45 Score=353.57 Aligned_cols=221 Identities=10% Similarity=0.098 Sum_probs=182.6
Q ss_pred cCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCC--HHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEE
Q 045127 238 NGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVS--REIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVT 314 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 314 (508)
++|+..+.||+|+||+||+|+. .+|+.||||++..... ....+.+.+|++++++++||||+++++++.+++..|+||
T Consensus 8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivm 87 (288)
T d1uu3a_ 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 87 (288)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEE
T ss_pred CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEE
Confidence 5799999999999999999998 5689999999863221 123567899999999999999999999999999999999
Q ss_pred eecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC-----------
Q 045127 315 EWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE----------- 382 (508)
Q Consensus 315 e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~----------- 382 (508)
||+++|+|.+++. .+.+++..+..++.|++.||+|||++ ||+||||||+|||+++++.+||+|||++
T Consensus 88 Ey~~gg~L~~~~~~~~~l~e~~~~~~~~qi~~al~ylH~~-~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~~~~ 166 (288)
T d1uu3a_ 88 SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK-GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 166 (288)
T ss_dssp CCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTSCEEECCCTTCEECC-------
T ss_pred EccCCCCHHHhhhccCCCCHHHHHHHHHHHHHHHHhhccc-cEEcCcCCccccccCCCceEEecccccceecccCCcccc
Confidence 9999999999887 67899999999999999999999999 9999999999999999999999999874
Q ss_pred ------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcch
Q 045127 383 ------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENM 444 (508)
Q Consensus 383 ------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 444 (508)
..++.++||||+||++|||++|+.||...... .+ .... ....+..+.
T Consensus 167 ~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~--~~---~~~i--------~~~~~~~p~-- 231 (288)
T d1uu3a_ 167 ANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEY--LI---FQKI--------IKLEYDFPE-- 231 (288)
T ss_dssp ---CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HH---HHHH--------HTTCCCCCT--
T ss_pred cccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHH--HH---HHHH--------HcCCCCCCc--
Confidence 23566899999999999999999999743211 11 1111 111111111
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 445 FDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 445 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
.....+.+++.+||+.||++|||++|+++.
T Consensus 232 -~~s~~~~~li~~~L~~dP~~R~t~~e~~~~ 261 (288)
T d1uu3a_ 232 -KFFPKARDLVEKLLVLDATKRLGCEEMEGY 261 (288)
T ss_dssp -TCCHHHHHHHHTTSCSSGGGSTTSGGGTCH
T ss_pred -cCCHHHHHHHHHHccCCHhHCcCHHHHcCC
Confidence 113456789999999999999999997553
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5e-44 Score=351.45 Aligned_cols=232 Identities=19% Similarity=0.238 Sum_probs=190.2
Q ss_pred hcCCCCCceeeecCCeEEEEEEE------CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhc-CCCCccceeeEEecCCe
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGIL------RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQF-QHKNLIRVLGWNNSRRT 309 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 309 (508)
.++|+..+.||+|+||.||+|++ .+++.||||+++..........+.+|+.+++++ +|||||++++++.+++.
T Consensus 22 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~~ 101 (311)
T d1t46a_ 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP 101 (311)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred HHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCCE
Confidence 35788889999999999999986 235689999998776666778899999999999 69999999999999999
Q ss_pred eEEEEeecCCCCHHHHhcc-------------------CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecC
Q 045127 310 RAIVTEWTNGGNVELWLSE-------------------SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTD 370 (508)
Q Consensus 310 ~~lv~e~~~~gsL~~~l~~-------------------~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~ 370 (508)
.++|||||++|+|.+++.. ..+++..+..++.||++||+|||++ +++||||||+||+++.
T Consensus 102 ~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~-~ivHrDLKp~NIl~~~ 180 (311)
T d1t46a_ 102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK-NCIHRDLAARNILLTH 180 (311)
T ss_dssp CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEEET
T ss_pred EEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC-Ceeecccccccccccc
Confidence 9999999999999999862 2589999999999999999999999 9999999999999999
Q ss_pred CCceEEeeccCCC-----------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHH
Q 045127 371 NLEPLISRFKIEY-----------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEY 421 (508)
Q Consensus 371 ~~~~kl~Dfg~~~-----------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~ 421 (508)
++.+|++|||.++ .++.++|||||||++|||+|+..|+.........+...
T Consensus 181 ~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~~~~~ 260 (311)
T d1t46a_ 181 GRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKM 260 (311)
T ss_dssp TTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHH
T ss_pred cCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence 9999999998742 35678999999999999999544443332222223333
Q ss_pred HHHhccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhh
Q 045127 422 IRMHYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKS 482 (508)
Q Consensus 422 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 482 (508)
+....+.. . . ......+.+++.+||+.||++||||+||+++|+++..+
T Consensus 261 i~~~~~~~--------~--~---~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~~i~~ 308 (311)
T d1t46a_ 261 IKEGFRML--------S--P---EHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE 308 (311)
T ss_dssp HHHTCCCC--------C--C---TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HhcCCCCC--------C--c---ccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhhcc
Confidence 32222111 0 0 11245678899999999999999999999999987665
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Probab=100.00 E-value=2.6e-44 Score=358.47 Aligned_cols=224 Identities=9% Similarity=0.089 Sum_probs=183.3
Q ss_pred hcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEe
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTE 315 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 315 (508)
.++|+..+.||+|+||.||+|.. .+|+.||||+++... ......+.+|+.++++++||||+++++++.+++..|+|||
T Consensus 28 ~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~-~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE 106 (352)
T d1koba_ 28 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY-PLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILE 106 (352)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-HHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEE
T ss_pred ccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcc-hhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEE
Confidence 45799999999999999999997 579999999997543 3356778999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEec--CCCceEEeeccCC---------
Q 045127 316 WTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLT--DNLEPLISRFKIE--------- 382 (508)
Q Consensus 316 ~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~--~~~~~kl~Dfg~~--------- 382 (508)
||++|+|.+++. ...+++.++..|+.||+.||+|||++ ||+||||||+|||++ .++.+||+|||++
T Consensus 107 ~~~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~~-~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~~~ 185 (352)
T d1koba_ 107 FLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEH-SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIV 185 (352)
T ss_dssp CCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCE
T ss_pred cCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecccccccccccccCCCeEEEeecccceecCCCCce
Confidence 999999998876 44689999999999999999999999 999999999999998 6789999999985
Q ss_pred -----------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchH
Q 045127 383 -----------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMF 445 (508)
Q Consensus 383 -----------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 445 (508)
..++.++||||+||++|||+||+.||.+..... ....+..... .+.. ....
T Consensus 186 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~--~~~~i~~~~~---------~~~~-~~~~ 253 (352)
T d1koba_ 186 KVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLE--TLQNVKRCDW---------EFDE-DAFS 253 (352)
T ss_dssp EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH--HHHHHHHCCC---------CCCS-STTT
T ss_pred eeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHhCCC---------CCCc-cccc
Confidence 235678999999999999999999997532211 1111111100 0000 0001
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 446 DQAEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 446 ~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
.....+.+++.+||+.||.+|||++|+++
T Consensus 254 ~~s~~~~~li~~~L~~dp~~R~s~~eil~ 282 (352)
T d1koba_ 254 SVSPEAKDFIKNLLQKEPRKRLTVHDALE 282 (352)
T ss_dssp TSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred CCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 12345778999999999999999999986
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.5e-44 Score=346.90 Aligned_cols=225 Identities=13% Similarity=0.168 Sum_probs=183.6
Q ss_pred hcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCH-----HHHHHHHHHHHHHhhcCCCCccceeeEEecCCee
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSR-----EIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTR 310 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 310 (508)
.+.|+..+.||+|+||+||+|+. .+|+.||||+++..... ...+.+.+|++++++++|||||++++++.+++..
T Consensus 9 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~ 88 (293)
T d1jksa_ 9 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 88 (293)
T ss_dssp GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEE
Confidence 46799999999999999999998 57899999998643221 2367899999999999999999999999999999
Q ss_pred EEEEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCC----ceEEeeccCC---
Q 045127 311 AIVTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNL----EPLISRFKIE--- 382 (508)
Q Consensus 311 ~lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~----~~kl~Dfg~~--- 382 (508)
|+|||||++|+|.+++. ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++ .+|++|||++
T Consensus 89 ~iv~E~~~gg~L~~~i~~~~~l~~~~~~~~~~qi~~al~yLH~~-~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~ 167 (293)
T d1jksa_ 89 ILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL-QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 167 (293)
T ss_dssp EEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEESCSSSSSCCEEECCCTTCEEC
T ss_pred EEEEEcCCCccccchhccccccchhHHHHHHHHHHHHHHhhhhc-ceeecccccceEEEecCCCcccceEecchhhhhhc
Confidence 99999999999999997 56899999999999999999999999 999999999999998776 5999999874
Q ss_pred -----------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhccc
Q 045127 383 -----------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMM 439 (508)
Q Consensus 383 -----------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 439 (508)
..++.++|||||||++|||++|+.||......+ ....+..... .......+
T Consensus 168 ~~~~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~--~~~~i~~~~~-~~~~~~~~--- 241 (293)
T d1jksa_ 168 DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE--TLANVSAVNY-EFEDEYFS--- 241 (293)
T ss_dssp TTSCBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHTTCC-CCCHHHHT---
T ss_pred CCCccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHHH--HHHHHHhcCC-CCCchhcC---
Confidence 246789999999999999999999997533211 1111111000 00000000
Q ss_pred CCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 440 LTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 440 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
.....+.+++.+||+.||++|||++|+++
T Consensus 242 ------~~s~~~~~li~~~L~~dP~~R~s~~eil~ 270 (293)
T d1jksa_ 242 ------NTSALAKDFIRRLLVKDPKKRMTIQDSLQ 270 (293)
T ss_dssp ------TSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ------CCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 12345678999999999999999999986
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.8e-44 Score=351.94 Aligned_cols=232 Identities=21% Similarity=0.315 Sum_probs=185.6
Q ss_pred cCCCCCceeeecCCeEEEEEEEC-CCC--EEEEEEecCCCCHHHHHHHHHHHHHHhhc-CCCCccceeeEEecCCeeEEE
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILR-DGT--RVKIEIYKGDVSREIRDEFVEECKLLVQF-QHKNLIRVLGWNNSRRTRAIV 313 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~-~~~--~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv 313 (508)
++|+..+.||+|+||.||+|.+. +|. .||||.++.....+..+.+.+|+++++++ +||||+++++++.+++..++|
T Consensus 10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~iV 89 (309)
T d1fvra_ 10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 89 (309)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEEE
Confidence 57888899999999999999974 343 57888886555555677899999999999 799999999999999999999
Q ss_pred EeecCCCCHHHHhc-----------------cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEE
Q 045127 314 TEWTNGGNVELWLS-----------------ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLI 376 (508)
Q Consensus 314 ~e~~~~gsL~~~l~-----------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl 376 (508)
|||+++|+|.+++. ...+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||
T Consensus 90 ~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~-~iiHrDlkp~NIL~~~~~~~kl 168 (309)
T d1fvra_ 90 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK-QFIHRDLAARNILVGENYVAKI 168 (309)
T ss_dssp ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECGGGCEEE
T ss_pred EEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcC-CccccccccceEEEcCCCceEE
Confidence 99999999999986 25789999999999999999999999 9999999999999999999999
Q ss_pred eeccCC--------------------------CCCCCcchhhHHHHHHHHHHhCCC-CCcccccCcccHHHHHHHhccch
Q 045127 377 SRFKIE--------------------------YQHRSTKYVYKFGLFLLEMITNRR-PLEEFERGEAGFIEYIRMHYPEN 429 (508)
Q Consensus 377 ~Dfg~~--------------------------~~~~~~~Dv~SlGvil~elltg~~-P~~~~~~~~~~~~~~~~~~~~~~ 429 (508)
+|||++ ..++.++|||||||++|||++|.. ||...... .+...+....
T Consensus 169 ~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~--~~~~~i~~~~--- 243 (309)
T d1fvra_ 169 ADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA--ELYEKLPQGY--- 243 (309)
T ss_dssp CCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHHGGGTC---
T ss_pred ccccccccccccccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCHH--HHHHHHHhcC---
Confidence 999974 234678999999999999999764 66533211 1111111110
Q ss_pred hhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhCCC
Q 045127 430 LQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSCPI 485 (508)
Q Consensus 430 ~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~ 485 (508)
.+.. . .....++.+++.+||+.||++||||+||++.|+++.+....
T Consensus 244 -----~~~~--~---~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~i~~~~~~ 289 (309)
T d1fvra_ 244 -----RLEK--P---LNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKT 289 (309)
T ss_dssp -----CCCC--C---TTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSSC
T ss_pred -----CCCC--C---ccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhcCcC
Confidence 1111 1 11245678899999999999999999999999999876544
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Probab=100.00 E-value=3.6e-44 Score=357.15 Aligned_cols=225 Identities=11% Similarity=0.146 Sum_probs=183.6
Q ss_pred hcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEe
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTE 315 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 315 (508)
.++|++.+.||+|+||.||+|+. .+|+.||||++.... ....+.+.+|+.++++++||||+++++++.+++..|+|||
T Consensus 25 l~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~-~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE 103 (350)
T d1koaa2 25 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH-ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYE 103 (350)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCS-HHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEEC
T ss_pred ccCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccc-hhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEE
Confidence 46899999999999999999997 468999999996543 3456789999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEec--CCCceEEeeccCC---------
Q 045127 316 WTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLT--DNLEPLISRFKIE--------- 382 (508)
Q Consensus 316 ~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~--~~~~~kl~Dfg~~--------- 382 (508)
||++|+|.+++. ...+++.++..|+.||+.||+|||++ ||+||||||+|||++ .++.+||+|||++
T Consensus 104 ~~~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~~-~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~ 182 (350)
T d1koaa2 104 FMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN-NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSV 182 (350)
T ss_dssp CCCSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEESSTTSCCEEECCCTTCEECCTTSCE
T ss_pred cCCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhc-CCeeeeechhHeeeccCCCCeEEEeecchheeccccccc
Confidence 999999999985 45799999999999999999999999 999999999999996 4688999999974
Q ss_pred -----------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchH
Q 045127 383 -----------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMF 445 (508)
Q Consensus 383 -----------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 445 (508)
..++.++|||||||++|||++|+.||...... .....+..... ... . ....
T Consensus 183 ~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~--~~~~~i~~~~~-~~~----~-----~~~~ 250 (350)
T d1koaa2 183 KVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDD--ETLRNVKSCDW-NMD----D-----SAFS 250 (350)
T ss_dssp EEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHTCC-CSC----C-----GGGG
T ss_pred ceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHH--HHHHHHHhCCC-CCC----c-----cccc
Confidence 23566899999999999999999999743211 11111111100 000 0 0001
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 446 DQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 446 ~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
.....+.+++.+||+.||++|||++|+++.
T Consensus 251 ~~s~~~~~li~~~L~~dP~~R~t~~eil~h 280 (350)
T d1koaa2 251 GISEDGKDFIRKLLLADPNTRMTIHQALEH 280 (350)
T ss_dssp GCCHHHHHHHHHHCCSSGGGSCCHHHHHHS
T ss_pred CCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 123457788999999999999999999874
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=4.1e-44 Score=345.53 Aligned_cols=224 Identities=15% Similarity=0.201 Sum_probs=182.9
Q ss_pred cCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCC--------HHHHHHHHHHHHHHhhcC-CCCccceeeEEecC
Q 045127 238 NGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVS--------REIRDEFVEECKLLVQFQ-HKNLIRVLGWNNSR 307 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~--------~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~ 307 (508)
++|+..+.||+|+||+||+|+. .+|+.||||+++.... ....+.+.+|+.++++++ ||||+++++++.++
T Consensus 3 ~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 82 (277)
T d1phka_ 3 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETN 82 (277)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECS
T ss_pred ccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecccC
Confidence 6789999999999999999997 5789999999864321 123456889999999997 99999999999999
Q ss_pred CeeEEEEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC---
Q 045127 308 RTRAIVTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY--- 383 (508)
Q Consensus 308 ~~~~lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~--- 383 (508)
+..|+|||||++|+|.+++. ...+++.++..++.||++||+|||++ ||+||||||+||+++.++.+||+|||.+.
T Consensus 83 ~~~~ivmE~~~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~-~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~ 161 (277)
T d1phka_ 83 TFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKL-NIVHRDLKPENILLDDDMNIKLTDFGFSCQLD 161 (277)
T ss_dssp SEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred cceEEEEEcCCCchHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHc-CCcccccccceEEEcCCCCeEEccchheeEcc
Confidence 99999999999999999997 67899999999999999999999999 99999999999999999999999998741
Q ss_pred -----------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhh
Q 045127 384 -----------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVV 434 (508)
Q Consensus 384 -----------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (508)
.++.++||||+||++|||++|+.||....... ....+...-. . ..
T Consensus 162 ~~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~--~~~~i~~~~~-~---~~ 235 (277)
T d1phka_ 162 PGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQML--MLRMIMSGNY-Q---FG 235 (277)
T ss_dssp TTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHHTCC-C---CC
T ss_pred CCCceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHH--HHHHHHhCCC-C---CC
Confidence 24567999999999999999999997543211 1111111000 0 00
Q ss_pred hhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 435 DERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 435 ~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
.+.. .....++.+++.+||+.||++|||++||++
T Consensus 236 ~~~~------~~~s~~~~~li~~~L~~~p~~R~s~~eil~ 269 (277)
T d1phka_ 236 SPEW------DDYSDTVKDLVSRFLVVQPQKRYTAEEALA 269 (277)
T ss_dssp TTTG------GGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred Cccc------ccCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 0000 112356778999999999999999999875
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.4e-44 Score=352.17 Aligned_cols=227 Identities=16% Similarity=0.245 Sum_probs=183.3
Q ss_pred cCCCCCceeeecCCeEEEEEEEC-CCC----EEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEE
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILR-DGT----RVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAI 312 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 312 (508)
.+|+..+.||+|+||+||+|.+. +|+ .||+|.++........+++.+|++++++++|||||+++|++.++ ..++
T Consensus 9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-~~~~ 87 (317)
T d1xkka_ 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL 87 (317)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SEEE
T ss_pred HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-CeeE
Confidence 46899999999999999999974 443 68999987655555678899999999999999999999999875 4678
Q ss_pred EEeecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC--------
Q 045127 313 VTEWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE-------- 382 (508)
Q Consensus 313 v~e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~-------- 382 (508)
+|||+.+|+|.+++. ...+++..+.+++.||+.||+|||++ +|+||||||+|||++.++.+||+|||++
T Consensus 88 v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~~-~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~ 166 (317)
T d1xkka_ 88 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 166 (317)
T ss_dssp EEECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEEEETTEEEECCCSHHHHTTTTCC
T ss_pred EEEeccCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHHc-CcccCcchhhcceeCCCCCeEeeccccceecccccc
Confidence 899999999998887 56799999999999999999999999 9999999999999999999999999863
Q ss_pred ---------------------CCCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhcccC
Q 045127 383 ---------------------YQHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMML 440 (508)
Q Consensus 383 ---------------------~~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 440 (508)
..++.++|||||||++|||+| |+.||+...... +...+..... +..
T Consensus 167 ~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~--~~~~i~~~~~----------~~~ 234 (317)
T d1xkka_ 167 EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE--ISSILEKGER----------LPQ 234 (317)
T ss_dssp --------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGG--HHHHHHHTCC----------CCC
T ss_pred cccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHH--HHHHHHcCCC----------CCC
Confidence 245678999999999999999 789987543222 2222222111 111
Q ss_pred CcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHh
Q 045127 441 TENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYK 481 (508)
Q Consensus 441 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~ 481 (508)
+ ......+.+++.+||+.||++|||+.||++.|+.+..
T Consensus 235 p---~~~~~~~~~li~~cl~~dP~~RPs~~eil~~l~~~~~ 272 (317)
T d1xkka_ 235 P---PICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 272 (317)
T ss_dssp C---TTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred C---cccCHHHHHHHHHhCCCChhhCcCHHHHHHHHHHHHh
Confidence 1 1124567789999999999999999999999988754
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.7e-45 Score=349.81 Aligned_cols=226 Identities=21% Similarity=0.292 Sum_probs=174.9
Q ss_pred cCCCCCceeeecCCeEEEEEEEC--CC--CEEEEEEecCCC--CHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeE
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILR--DG--TRVKIEIYKGDV--SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRA 311 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~--~~--~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 311 (508)
++|+..+.||+|+||.||+|++. ++ ..||||++.... ..+..++|.+|+.++++++||||++++|++.+ +..+
T Consensus 8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~-~~~~ 86 (273)
T d1u46a_ 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPMK 86 (273)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCE
T ss_pred HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-cchh
Confidence 56888899999999999999863 23 378999986443 23346789999999999999999999999976 4678
Q ss_pred EEEeecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC------
Q 045127 312 IVTEWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------ 383 (508)
Q Consensus 312 lv~e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------ 383 (508)
+||||+++|++.+++. ...+++..++.++.||++||.|||++ +|+||||||+||+++.++.+||+|||++.
T Consensus 87 lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~-~iiHrDikp~NIll~~~~~vkl~DfGl~~~~~~~~ 165 (273)
T d1u46a_ 87 MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK-RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND 165 (273)
T ss_dssp EEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEEEETTEEEECCCTTCEECCC-C
T ss_pred eeeeeecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhhhC-CEeeeeecHHHhccccccceeeccchhhhhcccCC
Confidence 9999999999998877 56799999999999999999999999 99999999999999999999999999753
Q ss_pred ------------------------CCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHHHHHHhccchhhhhhhhcc
Q 045127 384 ------------------------QHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERM 438 (508)
Q Consensus 384 ------------------------~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 438 (508)
.++.++|||||||++|||+| |+.||......+ ....+. .... .+
T Consensus 166 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~--~~~~i~---~~~~------~~ 234 (273)
T d1u46a_ 166 DHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ--ILHKID---KEGE------RL 234 (273)
T ss_dssp CEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--HHHHHH---TSCC------CC
T ss_pred CcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHH--HHHHHH---hCCC------CC
Confidence 23447899999999999998 899997543221 111111 1100 00
Q ss_pred cCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHH
Q 045127 439 MLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRA 479 (508)
Q Consensus 439 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i 479 (508)
... ......+.+++.+||+.||++|||++||.+.|++.
T Consensus 235 ~~~---~~~~~~l~~li~~cl~~dp~~RPt~~ei~~~L~~~ 272 (273)
T d1u46a_ 235 PRP---EDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA 272 (273)
T ss_dssp CCC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCc---ccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 011 11234677899999999999999999999998875
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6e-44 Score=349.18 Aligned_cols=231 Identities=16% Similarity=0.236 Sum_probs=179.7
Q ss_pred hcCCCCCceeeecCCeEEEEEEEC------CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhc-CCCCccceeeEEecC-C
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGILR------DGTRVKIEIYKGDVSREIRDEFVEECKLLVQF-QHKNLIRVLGWNNSR-R 308 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~-~ 308 (508)
-++|+..+.||+|+||.||+|.+. +++.||||+++........+.+.+|...+.++ +|+||+.+++++... .
T Consensus 12 ~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~ 91 (299)
T d1ywna1 12 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 91 (299)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTS
T ss_pred HHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCCC
Confidence 367899999999999999999963 24689999998766666678888999988887 689999999988754 4
Q ss_pred eeEEEEeecCCCCHHHHhcc-----------------CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCC
Q 045127 309 TRAIVTEWTNGGNVELWLSE-----------------SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDN 371 (508)
Q Consensus 309 ~~~lv~e~~~~gsL~~~l~~-----------------~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~ 371 (508)
..++|||||++|+|.+++.. ..+++.++..++.||++||+|||++ +|+||||||+|||++.+
T Consensus 92 ~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~-~ivHrDlKp~NILl~~~ 170 (299)
T d1ywna1 92 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR-KCIHRDLAARNILLSEK 170 (299)
T ss_dssp CCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECGG
T ss_pred eEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhC-CCcCCcCCccceeECCC
Confidence 68999999999999999861 3478999999999999999999999 99999999999999999
Q ss_pred CceEEeeccCCC-----------------------------CCCCcchhhHHHHHHHHHHhCC-CCCcccccCcccHHHH
Q 045127 372 LEPLISRFKIEY-----------------------------QHRSTKYVYKFGLFLLEMITNR-RPLEEFERGEAGFIEY 421 (508)
Q Consensus 372 ~~~kl~Dfg~~~-----------------------------~~~~~~Dv~SlGvil~elltg~-~P~~~~~~~~~~~~~~ 421 (508)
+.+||+|||+++ .++.++|||||||++|||+||. .||....... .+...
T Consensus 171 ~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~-~~~~~ 249 (299)
T d1ywna1 171 NVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-EFCRR 249 (299)
T ss_dssp GCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSH-HHHHH
T ss_pred CcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHHH-HHHHH
Confidence 999999999752 3456899999999999999975 5676433221 22222
Q ss_pred HHHhccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhh
Q 045127 422 IRMHYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKS 482 (508)
Q Consensus 422 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 482 (508)
+...... ... .....++.+++.+||+.||++|||++||+++|+++.++
T Consensus 250 ~~~~~~~--------~~~-----~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~ilq~ 297 (299)
T d1ywna1 250 LKEGTRM--------RAP-----DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 297 (299)
T ss_dssp HHHTCCC--------CCC-----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HhcCCCC--------CCC-----ccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence 2222111 110 11234577899999999999999999999999998764
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.5e-44 Score=348.66 Aligned_cols=230 Identities=17% Similarity=0.248 Sum_probs=185.6
Q ss_pred hcCCCCCceeeecCCeEEEEEEECC--------CCEEEEEEecCCCCHHHHHHHHHHHHHHhhc-CCCCccceeeEEecC
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGILRD--------GTRVKIEIYKGDVSREIRDEFVEECKLLVQF-QHKNLIRVLGWNNSR 307 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 307 (508)
.++|+..+.||+|+||.||+|+... +..||||+++.........++.+|...+.++ +||||+++++++.++
T Consensus 12 ~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~ 91 (299)
T d1fgka_ 12 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 91 (299)
T ss_dssp GGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccccccC
Confidence 3578888999999999999998622 2479999998777777778899999999998 799999999999999
Q ss_pred CeeEEEEeecCCCCHHHHhcc-----------------CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecC
Q 045127 308 RTRAIVTEWTNGGNVELWLSE-----------------SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTD 370 (508)
Q Consensus 308 ~~~~lv~e~~~~gsL~~~l~~-----------------~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~ 370 (508)
+..++||||+++|+|.+++.. ..+++.+++.++.||+.||+|||++ +|+||||||+|||++.
T Consensus 92 ~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~-~ivHrDiKp~NiLl~~ 170 (299)
T d1fgka_ 92 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK-KCIHRDLAARNVLVTE 170 (299)
T ss_dssp SSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECT
T ss_pred CeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhC-CEEeeeecccceeecC
Confidence 999999999999999999962 3589999999999999999999999 9999999999999999
Q ss_pred CCceEEeeccCC-----------------------------CCCCCcchhhHHHHHHHHHHh-CCCCCcccccCcccHHH
Q 045127 371 NLEPLISRFKIE-----------------------------YQHRSTKYVYKFGLFLLEMIT-NRRPLEEFERGEAGFIE 420 (508)
Q Consensus 371 ~~~~kl~Dfg~~-----------------------------~~~~~~~Dv~SlGvil~ellt-g~~P~~~~~~~~~~~~~ 420 (508)
++.+||+|||.+ ..++.++|||||||++|||++ |..||...... .+..
T Consensus 171 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~--~~~~ 248 (299)
T d1fgka_ 171 DNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE--ELFK 248 (299)
T ss_dssp TCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--HHHH
T ss_pred CCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCHH--HHHH
Confidence 999999999874 346678999999999999998 68888643321 1222
Q ss_pred HHHHhccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhh
Q 045127 421 YIRMHYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKS 482 (508)
Q Consensus 421 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 482 (508)
.+..... +.. .. .....+.+++.+||+.||++|||+.||++.|+++...
T Consensus 249 ~i~~~~~--------~~~--p~---~~~~~l~~li~~cl~~dP~~Rps~~eil~~L~~i~a~ 297 (299)
T d1fgka_ 249 LLKEGHR--------MDK--PS---NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL 297 (299)
T ss_dssp HHHTTCC--------CCC--CS---SCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHcCCC--------CCC--Cc---cchHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHhhc
Confidence 2211111 111 11 1235678899999999999999999999999998653
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=1.7e-43 Score=342.10 Aligned_cols=229 Identities=14% Similarity=0.180 Sum_probs=187.7
Q ss_pred hcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCC--CHHHHHHHHHHHHHHhhcCCCCccceeeEEecCC----e
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDV--SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRR----T 309 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~----~ 309 (508)
.++|+..+.||+|+||.||+|+. .+|+.||||+++... .....+.+.+|++++++++||||+++++++...+ .
T Consensus 6 ~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~ 85 (277)
T d1o6ya_ 6 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 85 (277)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEE
T ss_pred cceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCce
Confidence 46799999999999999999997 579999999997543 3345678999999999999999999999987543 3
Q ss_pred eEEEEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC------
Q 045127 310 RAIVTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE------ 382 (508)
Q Consensus 310 ~~lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~------ 382 (508)
.|+||||+++|+|.+++. ...+++.++..++.||++||+|||++ ||+||||||+|||++.++..+++|||..
T Consensus 86 ~~lvmE~~~g~~L~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~-~iiHrDiKP~NIll~~~~~~~l~d~~~~~~~~~~ 164 (277)
T d1o6ya_ 86 PYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQN-GIIHRDVKPANIMISATNAVKVMDFGIARAIADS 164 (277)
T ss_dssp EEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEEETTSCEEECCCTTCEECC--
T ss_pred EEEEEECCCCCEehhhhcccCCCCHHHHHHHHHHHHHHHHHHHhC-CccCccccCcccccCccccceeehhhhhhhhccc
Confidence 789999999999999887 67899999999999999999999999 9999999999999999999999999752
Q ss_pred ------------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccch--hhhhhhh
Q 045127 383 ------------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPEN--LQLVVDE 436 (508)
Q Consensus 383 ------------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 436 (508)
..++.++|||||||++|||+||+.||......+ ......... ......+
T Consensus 165 ~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~-----~~~~~~~~~~~~~~~~~~ 239 (277)
T d1o6ya_ 165 GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVS-----VAYQHVREDPIPPSARHE 239 (277)
T ss_dssp --------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH-----HHHHHHHCCCCCGGGTSS
T ss_pred cccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHHH-----HHHHHHhcCCCCCchhcc
Confidence 346778999999999999999999997532211 111111110 0000011
Q ss_pred cccCCcchHHHHHHHHHHHHhcCCCCCCCCC-CHHHHHHHHHHHH
Q 045127 437 RMMLTENMFDQAEQGLGLGLMCTDQPTGKLP-SLVQIYNMITRAY 480 (508)
Q Consensus 437 ~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-s~~evl~~L~~i~ 480 (508)
.....+.+++.+||+.||++|| |++++++.|.++.
T Consensus 240 ---------~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r~~ 275 (277)
T d1o6ya_ 240 ---------GLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH 275 (277)
T ss_dssp ---------SCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred ---------CCCHHHHHHHHHHccCCHhHCHhHHHHHHHHHHHHh
Confidence 1235677899999999999999 8999999998875
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.4e-44 Score=351.07 Aligned_cols=237 Identities=13% Similarity=0.145 Sum_probs=182.4
Q ss_pred cCCCCCceeeecCCeEEEEEEECCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCC----eeEEE
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRR----TRAIV 313 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~----~~~lv 313 (508)
.+|...+.||+|+||.||+|++ +|+.||||+++... ........|+..+.+++||||+++++++...+ ..++|
T Consensus 3 ~~~~l~~~iG~G~fg~Vy~~~~-~g~~vAvK~~~~~~--~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv 79 (303)
T d1vjya_ 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE--ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV 79 (303)
T ss_dssp GGEEEEEEEECCSSSEEEEEEE-TTEEEEEEEECGGG--HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccc--hhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEE
Confidence 4566778999999999999997 58899999995432 12222344556667889999999999998643 57999
Q ss_pred EeecCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhh--------CCCccccCCCCCCEEecCCCceEEeeccCCCC-
Q 045127 314 TEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQE--------QWPEVDYDLRTGSVLLTDNLEPLISRFKIEYQ- 384 (508)
Q Consensus 314 ~e~~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~--------~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~- 384 (508)
||||++|+|.++++...++|..+.+++.|++.||+|+|+ + ||+||||||+|||++.++.+||+|||++..
T Consensus 80 ~Ey~~~g~L~~~l~~~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~-~IvHrDlKp~NILl~~~~~~Kl~DFGl~~~~ 158 (303)
T d1vjya_ 80 SDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP-AIAHRDLKSKNILVKKNGTCCIADLGLAVRH 158 (303)
T ss_dssp EECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC-EEECSCCCGGGEEECTTSCEEECCCTTCEEE
T ss_pred EecccCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCC-CeeccccCccceEEcCCCCeEEEecCccccc
Confidence 999999999999998899999999999999999999996 5 999999999999999999999999996421
Q ss_pred ------------------------------------CCCcchhhHHHHHHHHHHhCCCCCcccccCcc----------cH
Q 045127 385 ------------------------------------HRSTKYVYKFGLFLLEMITNRRPLEEFERGEA----------GF 418 (508)
Q Consensus 385 ------------------------------------~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~----------~~ 418 (508)
++.++|||||||++|||+||..||........ ..
T Consensus 159 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~~~ 238 (303)
T d1vjya_ 159 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSV 238 (303)
T ss_dssp ETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCH
T ss_pred cCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccccchH
Confidence 23468999999999999999988754332211 11
Q ss_pred HHHHHHhccchhhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhh
Q 045127 419 IEYIRMHYPENLQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKS 482 (508)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 482 (508)
........ ....++.+.......+....+.+++.+||+.||++|||+.||++.|+++.+.
T Consensus 239 ~~~~~~~~----~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i~~~ 298 (303)
T d1vjya_ 239 EEMRKVVC----EQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp HHHHHHHT----TSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHh----ccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHh
Confidence 11111110 1111222222222234567788999999999999999999999999998764
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-43 Score=348.67 Aligned_cols=224 Identities=11% Similarity=0.106 Sum_probs=182.2
Q ss_pred hhcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEE
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVT 314 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 314 (508)
..++|+..+.||+|+||+||+|... +|+.||||+++... .....+.+|+++|++++||||+++++++.+++..|+||
T Consensus 3 ~~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~--~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvm 80 (321)
T d1tkia_ 3 LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG--TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIF 80 (321)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT--HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEE
T ss_pred CccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCc--ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEE
Confidence 3467999999999999999999984 68899999996543 23566889999999999999999999999999999999
Q ss_pred eecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecC--CCceEEeeccCC--------
Q 045127 315 EWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTD--NLEPLISRFKIE-------- 382 (508)
Q Consensus 315 e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~--~~~~kl~Dfg~~-------- 382 (508)
|||+||+|.+++. ...+++.++..|+.||+.||+|||++ ||+||||||+|||++. ...+||+|||.+
T Consensus 81 E~~~gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~~-~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~~~ 159 (321)
T d1tkia_ 81 EFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH-NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDN 159 (321)
T ss_dssp CCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCE
T ss_pred ecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHc-CCCcccccccceeecCCCceEEEEcccchhhccccCCc
Confidence 9999999999997 33689999999999999999999999 9999999999999984 458999999884
Q ss_pred ------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcch
Q 045127 383 ------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENM 444 (508)
Q Consensus 383 ------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 444 (508)
..++.++||||+||++|||++|+.||...... .+...+ ...........
T Consensus 160 ~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~--~~~~~i-----------~~~~~~~~~~~ 226 (321)
T d1tkia_ 160 FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ--QIIENI-----------MNAEYTFDEEA 226 (321)
T ss_dssp EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHHHH-----------HHTCCCCCHHH
T ss_pred ccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHH--HHHHHH-----------HhCCCCCChhh
Confidence 23566889999999999999999999753321 111111 11111000000
Q ss_pred -HHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 445 -FDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 445 -~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
......+.+++.+|++.||++|||++|+++.
T Consensus 227 ~~~~s~~~~~li~~~L~~dp~~R~s~~eil~h 258 (321)
T d1tkia_ 227 FKEISIEAMDFVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp HTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 0113457789999999999999999999873
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-43 Score=348.41 Aligned_cols=231 Identities=19% Similarity=0.348 Sum_probs=189.2
Q ss_pred hcCCCCCceeeecCCeEEEEEEEC------CCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCCee
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGILR------DGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTR 310 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 310 (508)
-++|+..+.||+|+||+||+|.+. +++.||||+++..........|.+|++++++++||||+++++++..++..
T Consensus 19 ~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~ 98 (308)
T d1p4oa_ 19 REKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPT 98 (308)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSC
T ss_pred HHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCCce
Confidence 367788899999999999999863 25789999998766666777899999999999999999999999999999
Q ss_pred EEEEeecCCCCHHHHhc-----------cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeec
Q 045127 311 AIVTEWTNGGNVELWLS-----------ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRF 379 (508)
Q Consensus 311 ~lv~e~~~~gsL~~~l~-----------~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Df 379 (508)
++||||+++|+|.+++. ...+++..+.+++.|+++||.|||++ +|+||||||+|||+++++++||+||
T Consensus 99 ~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~-~ivHrDlk~~NiLld~~~~~Kl~DF 177 (308)
T d1p4oa_ 99 LVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN-KFVHRDLAARNCMVAEDFTVKIGDF 177 (308)
T ss_dssp EEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT-TCBCSCCSGGGEEECTTCCEEECCT
T ss_pred eEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhC-CeeeceEcCCceeecCCceEEEeec
Confidence 99999999999999886 13468999999999999999999999 9999999999999999999999999
Q ss_pred cCCC-----------------------------CCCCcchhhHHHHHHHHHHhCC-CCCcccccCcccHHHHHHHhccch
Q 045127 380 KIEY-----------------------------QHRSTKYVYKFGLFLLEMITNR-RPLEEFERGEAGFIEYIRMHYPEN 429 (508)
Q Consensus 380 g~~~-----------------------------~~~~~~Dv~SlGvil~elltg~-~P~~~~~~~~~~~~~~~~~~~~~~ 429 (508)
|++. .++.++||||||+++|||+||. .||...... +....
T Consensus 178 Gla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~-----~~~~~----- 247 (308)
T d1p4oa_ 178 GMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE-----QVLRF----- 247 (308)
T ss_dssp TCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHH-----HHHHH-----
T ss_pred ccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCCHH-----HHHHH-----
Confidence 9852 3456889999999999999985 666543211 11111
Q ss_pred hhhhhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhC
Q 045127 430 LQLVVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSC 483 (508)
Q Consensus 430 ~~~~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 483 (508)
+.+....... ......+.+++.+||+.||++|||++||+++|++..++.
T Consensus 248 ---i~~~~~~~~p--~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~~~ 296 (308)
T d1p4oa_ 248 ---VMEGGLLDKP--DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPG 296 (308)
T ss_dssp ---HHTTCCCCCC--TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTT
T ss_pred ---HHhCCCCCCc--ccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCC
Confidence 1111110000 112356888999999999999999999999998875543
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7e-43 Score=345.74 Aligned_cols=222 Identities=18% Similarity=0.190 Sum_probs=184.0
Q ss_pred hcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCC--HHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEE
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVS--REIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIV 313 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 313 (508)
.++|+..+.||+|+||.||+|+. .+|+.||||+++.... ....+.+.+|+.++++++||||+++++++.+++..|+|
T Consensus 4 l~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv 83 (337)
T d1o6la_ 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccc
Confidence 46799999999999999999997 5799999999964321 12357789999999999999999999999999999999
Q ss_pred EeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC----------
Q 045127 314 TEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE---------- 382 (508)
Q Consensus 314 ~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~---------- 382 (508)
||||++|+|.+++. ...+++..+..++.||+.||+|||++ ||+||||||+|||++.+|.+||+|||++
T Consensus 84 ~ey~~gg~L~~~~~~~~~~~e~~~~~~~~qil~al~ylH~~-~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~~~~~ 162 (337)
T d1o6la_ 84 MEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR-DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM 162 (337)
T ss_dssp EECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCCB
T ss_pred eeccCCCchhhhhhcccCCcHHHHHHHHHHHhhhhhhhhhc-CccccccCHHHeEecCCCCEEEeecccccccccCCccc
Confidence 99999999999988 67899999999999999999999999 9999999999999999999999999885
Q ss_pred -----------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchH
Q 045127 383 -----------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMF 445 (508)
Q Consensus 383 -----------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 445 (508)
..++.++||||+||++|||++|+.||...... .+..... ...+..+.
T Consensus 163 ~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~--~~~~~i~-----------~~~~~~p~--- 226 (337)
T d1o6la_ 163 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--RLFELIL-----------MEEIRFPR--- 226 (337)
T ss_dssp CCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHH-----------HCCCCCCT---
T ss_pred ccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHH--HHHHHHh-----------cCCCCCCc---
Confidence 34577899999999999999999999754321 1111111 11111111
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCC-----HHHHHHH
Q 045127 446 DQAEQGLGLGLMCTDQPTGKLPS-----LVQIYNM 475 (508)
Q Consensus 446 ~~~~~l~~l~~~Cl~~dP~~RPs-----~~evl~~ 475 (508)
.....+.+++.+||+.||++||+ ++|+++.
T Consensus 227 ~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~H 261 (337)
T d1o6la_ 227 TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp TSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred cCCHHHHHHHHhhccCCchhhcccccccHHHHHcC
Confidence 11345678899999999999994 8888873
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.6e-43 Score=341.99 Aligned_cols=236 Identities=14% Similarity=0.176 Sum_probs=179.1
Q ss_pred cCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCH-HHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEe
Q 045127 238 NGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSR-EIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTE 315 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 315 (508)
++|++.+.||+|+||+||+|+. .+|+.||||+++..... ...+.+.+|++++++++||||+++++++.++...|+|||
T Consensus 2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e 81 (298)
T d1gz8a_ 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 81 (298)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEe
Confidence 5899999999999999999997 57999999999644322 235788999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC-----------
Q 045127 316 WTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE----------- 382 (508)
Q Consensus 316 ~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~----------- 382 (508)
|+.++.+..... ...+++..+..++.|++.||+|||++ ||+||||||+|||++.++.+||+|||.+
T Consensus 82 ~~~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~-~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~~~~~ 160 (298)
T d1gz8a_ 82 FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT 160 (298)
T ss_dssp CCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCSBCTT
T ss_pred ecCCchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcC-CEEccccCchheeecccCcceeccCCcceeccCCcccce
Confidence 997654443333 56799999999999999999999999 9999999999999999999999999863
Q ss_pred -----------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhc-cch-hhhhhh------hc
Q 045127 383 -----------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHY-PEN-LQLVVD------ER 437 (508)
Q Consensus 383 -----------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~------~~ 437 (508)
..++.++||||+||++|+|++|+.||....... .+........ +.. ....+. ..
T Consensus 161 ~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 239 (298)
T d1gz8a_ 161 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID-QLFRIFRTLGTPDEVVWPGVTSMPDYKPS 239 (298)
T ss_dssp CCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCTTTSTTGGGSTTCCTT
T ss_pred eecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHH-HHHHHHHhcCCCchhhccccccccccccc
Confidence 234678999999999999999999997543221 1111111111 110 000000 00
Q ss_pred ccC--Ccch----HHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 438 MML--TENM----FDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 438 l~~--~~~~----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
... .... ......+.+++.+||+.||++|||++|+++.
T Consensus 240 ~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H 283 (298)
T d1gz8a_ 240 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 283 (298)
T ss_dssp SCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 000 0000 0113567889999999999999999999874
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=7.1e-43 Score=343.23 Aligned_cols=221 Identities=14% Similarity=0.148 Sum_probs=183.1
Q ss_pred cCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCC--HHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEE
Q 045127 238 NGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVS--REIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVT 314 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 314 (508)
++|+..+.||+|+||+||+|+. .+|+.||||+++.... ....+.+.+|+.++++++||||+++++++.+++..|+||
T Consensus 4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivm 83 (316)
T d1fota_ 4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM 83 (316)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEe
Confidence 5789999999999999999997 5699999999964321 123577899999999999999999999999999999999
Q ss_pred eecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC-----------
Q 045127 315 EWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE----------- 382 (508)
Q Consensus 315 e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~----------- 382 (508)
|||+||+|..++. ...+++..+..++.||+.||+|||++ ||+||||||+|||++.++.+||+|||++
T Consensus 84 E~~~gg~l~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 162 (316)
T d1fota_ 84 DYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSK-DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLC 162 (316)
T ss_dssp CCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTT-TEECCCCCGGGEEECTTSCEEECCCSSCEECSSCBCCCC
T ss_pred eecCCccccccccccccccccHHHHHHHHHHHhhhhhccC-cEEccccCchheeEcCCCCEEEecCccceEecccccccc
Confidence 9999999999988 67789999999999999999999999 9999999999999999999999999874
Q ss_pred -------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHHH
Q 045127 383 -------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQAE 449 (508)
Q Consensus 383 -------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 449 (508)
..++.++||||+||++|||+||+.||...... +.... +......... ....
T Consensus 163 Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~-----~~~~~--------i~~~~~~~p~---~~s~ 226 (316)
T d1fota_ 163 GTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTM-----KTYEK--------ILNAELRFPP---FFNE 226 (316)
T ss_dssp SCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH-----HHHHH--------HHHCCCCCCT---TSCH
T ss_pred CcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHH-----HHHHH--------HHcCCCCCCC---CCCH
Confidence 34678999999999999999999999753211 11111 1111111111 1134
Q ss_pred HHHHHHHhcCCCCCCCCC-----CHHHHHHH
Q 045127 450 QGLGLGLMCTDQPTGKLP-----SLVQIYNM 475 (508)
Q Consensus 450 ~l~~l~~~Cl~~dP~~RP-----s~~evl~~ 475 (508)
.+.+++.+||+.||.+|| |++|+++.
T Consensus 227 ~~~~li~~~L~~dp~~R~~~~r~t~~~il~H 257 (316)
T d1fota_ 227 DVKDLLSRLITRDLSQRLGNLQNGTEDVKNH 257 (316)
T ss_dssp HHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred HHHHHHHHHhhhCHHhccccchhhHHHHHcC
Confidence 567889999999999996 89999864
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=1.1e-42 Score=348.46 Aligned_cols=225 Identities=13% Similarity=0.113 Sum_probs=179.2
Q ss_pred hcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCH--HHHHHH---HHHHHHHhhcCCCCccceeeEEecCCee
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSR--EIRDEF---VEECKLLVQFQHKNLIRVLGWNNSRRTR 310 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~--~~~~~~---~~E~~~l~~l~h~niv~~~~~~~~~~~~ 310 (508)
.++|+..+.||+|+||.||+|+. .+|+.||||++...... .....+ ..|+.+++.++||||+++++++.+++..
T Consensus 3 lddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~ 82 (364)
T d1omwa3 3 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 82 (364)
T ss_dssp STTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred HHhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEE
Confidence 36799999999999999999997 46999999998532111 112223 3456777888999999999999999999
Q ss_pred EEEEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC-------
Q 045127 311 AIVTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE------- 382 (508)
Q Consensus 311 ~lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~------- 382 (508)
|+|||||++|+|.+++. ...+++..+..++.||+.||+|||++ ||+||||||+|||++.++.+||+|||++
T Consensus 83 ~ivmE~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~ylH~~-~iiHrDlKP~NILl~~~g~iKl~DFGla~~~~~~~ 161 (364)
T d1omwa3 83 SFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNR-FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK 161 (364)
T ss_dssp EEEECCCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECSSSCEEECCCTTCEECSSSC
T ss_pred EEEEEecCCCcHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHC-CccceeeccceeEEcCCCcEEEeeeceeeecCCCc
Confidence 99999999999999997 67889999999999999999999999 9999999999999999999999999874
Q ss_pred -------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcc
Q 045127 383 -------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTEN 443 (508)
Q Consensus 383 -------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 443 (508)
..++.++|||||||++|||+||+.||....... .......... .......
T Consensus 162 ~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~--~~~~~~~~~~--------~~~~~~~- 230 (364)
T d1omwa3 162 PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD--KHEIDRMTLT--------MAVELPD- 230 (364)
T ss_dssp CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSC--HHHHHHHSSS--------CCCCCCS-
T ss_pred ccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHhccc--------CCCCCCC-
Confidence 235788999999999999999999997543222 1111111111 1111111
Q ss_pred hHHHHHHHHHHHHhcCCCCCCCCCC-----HHHHHHH
Q 045127 444 MFDQAEQGLGLGLMCTDQPTGKLPS-----LVQIYNM 475 (508)
Q Consensus 444 ~~~~~~~l~~l~~~Cl~~dP~~RPs-----~~evl~~ 475 (508)
.....+.+++.+||+.||++||| ++|+++.
T Consensus 231 --~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~H 265 (364)
T d1omwa3 231 --SFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKES 265 (364)
T ss_dssp --SSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHTS
T ss_pred --CCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHcC
Confidence 11345778999999999999999 7888763
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=9.7e-43 Score=338.40 Aligned_cols=235 Identities=14% Similarity=0.209 Sum_probs=185.5
Q ss_pred cCCCCCceeeecCCeEEEEEEECCCCEEEEEEecCCCCH-HHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEee
Q 045127 238 NGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSR-EIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEW 316 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 316 (508)
++|+..+.||+|+||+||+|++++|+.||||+++..... ...+++.+|+.++++++||||+++++++..++..+++|||
T Consensus 2 ~~Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~ 81 (286)
T d1ob3a_ 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (286)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CCceeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEEe
Confidence 578999999999999999999999999999999654332 2357899999999999999999999999999999999999
Q ss_pred cCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC-------------
Q 045127 317 TNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE------------- 382 (508)
Q Consensus 317 ~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~------------- 382 (508)
+.++.+..+.. ...+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+|++|||.+
T Consensus 82 ~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~ 160 (286)
T d1ob3a_ 82 LDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR-RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHE 160 (286)
T ss_dssp CSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC--------
T ss_pred ehhhhHHHHHhhcCCcchhhhHHHHHHHHHHHHHhccC-cEEecCCCCceeeEcCCCCEEecccccceecccCcccccee
Confidence 99888877776 77899999999999999999999999 9999999999999999999999999862
Q ss_pred ---------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccch---hhhhh-----hhccc
Q 045127 383 ---------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPEN---LQLVV-----DERMM 439 (508)
Q Consensus 383 ---------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~---~~~~~-----~~~l~ 439 (508)
..++.++||||+||++|||++|+.||.+..... .+........... ..... +....
T Consensus 161 ~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (286)
T d1ob3a_ 161 IVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEAD-QLMRIFRILGTPNSKNWPNVTELPKYDPNFT 239 (286)
T ss_dssp -CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCTTTSTTGGGSTTCCTTCC
T ss_pred cccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHH-HHHHHHHhhCCCChhhccchhhhhhcccccc
Confidence 235788999999999999999999997543221 1121111111100 00000 00000
Q ss_pred C------CcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 440 L------TENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 440 ~------~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
. ..........+.+++.+||+.||++|||++|+++
T Consensus 240 ~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~ 280 (286)
T d1ob3a_ 240 VYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (286)
T ss_dssp CCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 0 0000112356778999999999999999999975
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-42 Score=339.92 Aligned_cols=232 Identities=16% Similarity=0.097 Sum_probs=175.4
Q ss_pred CCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHH----HHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEee
Q 045127 242 KKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSRE----IRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTEW 316 (508)
Q Consensus 242 ~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 316 (508)
..++||+|+||+||+|+. .+|+.||||+++...... ..+.+.+|+.++++++||||+++++++..++..++||||
T Consensus 2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~ 81 (299)
T d1ua2a_ 2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDF 81 (299)
T ss_dssp EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEEC
T ss_pred cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhh
Confidence 357899999999999997 468999999986433221 235688999999999999999999999999999999999
Q ss_pred cCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC------------
Q 045127 317 TNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY------------ 383 (508)
Q Consensus 317 ~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~------------ 383 (508)
+.++++..+.. ...+++.++..++.||+.||+|||++ ||+||||||+|||++.++.+||+|||.+.
T Consensus 82 ~~~~~~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~-~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~~~~~~ 160 (299)
T d1ua2a_ 82 METDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQH-WILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQ 160 (299)
T ss_dssp CSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCCCCCS
T ss_pred hcchHHhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcc-ceecccCCcceEEecCCCccccccCccccccCCCcccccce
Confidence 99988877776 56789999999999999999999999 99999999999999999999999998742
Q ss_pred ----------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccch---hhhhhh----hcccC
Q 045127 384 ----------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPEN---LQLVVD----ERMML 440 (508)
Q Consensus 384 ----------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~---~~~~~~----~~l~~ 440 (508)
.++.++|||||||++|||+||+.||......+ .+........... ...... .....
T Consensus 161 ~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~-~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (299)
T d1ua2a_ 161 VVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLD-QLTRIFETLGTPTEEQWPDMCSLPDYVTFKS 239 (299)
T ss_dssp CCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCTTTSSSTTSSTTCCCCCC
T ss_pred ecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHH-HHHHHHHhcCCCChhhccchhccchhhhhcc
Confidence 34568899999999999999999997543221 1111111111000 000000 00000
Q ss_pred C-cch-----HHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 441 T-ENM-----FDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 441 ~-~~~-----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
. ... ......+.+++.+||+.||++|||++|+++.
T Consensus 240 ~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~H 280 (299)
T d1ua2a_ 240 FPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 280 (299)
T ss_dssp CCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred CCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhCC
Confidence 0 000 0113567889999999999999999999863
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=3.5e-42 Score=342.95 Aligned_cols=220 Identities=15% Similarity=0.113 Sum_probs=182.6
Q ss_pred cCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCC--HHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEE
Q 045127 238 NGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVS--REIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVT 314 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 314 (508)
++|++.+.||+|+||.||+|++ .+|+.||||++..... ....+.+.+|+++++.++||||+++++++.+....++||
T Consensus 41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v~ 120 (350)
T d1rdqe_ 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeeccccccccccccccc
Confidence 5799999999999999999998 4799999999853221 123567899999999999999999999999999999999
Q ss_pred eecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC-----------
Q 045127 315 EWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE----------- 382 (508)
Q Consensus 315 e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~----------- 382 (508)
||+.+|+|..++. ...+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||++
T Consensus 121 e~~~~g~l~~~l~~~~~l~e~~~~~i~~qi~~aL~yLH~~-~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~~~~~~ 199 (350)
T d1rdqe_ 121 EYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLC 199 (350)
T ss_dssp ECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTSCEEECCCTTCEECSSCBCCCE
T ss_pred ccccccchhhhHhhcCCCCHHHHHHHHHHHHHHHHHHHhC-CEecCcCCHHHcccCCCCCEEeeeceeeeeccccccccc
Confidence 9999999999987 67899999999999999999999999 9999999999999999999999999974
Q ss_pred -------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchHHHHH
Q 045127 383 -------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMFDQAE 449 (508)
Q Consensus 383 -------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 449 (508)
..++.++|||||||++|||+||+.||..... ..+...+ ......... ....
T Consensus 200 Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~--~~~~~~i-----------~~~~~~~p~---~~s~ 263 (350)
T d1rdqe_ 200 GTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP--IQIYEKI-----------VSGKVRFPS---HFSS 263 (350)
T ss_dssp ECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHH-----------HHCCCCCCT---TCCH
T ss_pred CccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCH--HHHHHHH-----------hcCCCCCCc---cCCH
Confidence 3467889999999999999999999974321 1111111 111111111 1234
Q ss_pred HHHHHHHhcCCCCCCCCC-----CHHHHHH
Q 045127 450 QGLGLGLMCTDQPTGKLP-----SLVQIYN 474 (508)
Q Consensus 450 ~l~~l~~~Cl~~dP~~RP-----s~~evl~ 474 (508)
.+.+++.+||+.||.+|+ |++|+++
T Consensus 264 ~~~~li~~~L~~dP~kR~~~~r~t~~ell~ 293 (350)
T d1rdqe_ 264 DLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp HHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred HHHHHHHHHhhhCHHhccccccccHHHHHc
Confidence 577889999999999994 8999986
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-42 Score=341.29 Aligned_cols=220 Identities=16% Similarity=0.209 Sum_probs=179.1
Q ss_pred cCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCC--HHHHHHHHHHHHHHh-hcCCCCccceeeEEecCCeeEEE
Q 045127 238 NGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVS--REIRDEFVEECKLLV-QFQHKNLIRVLGWNNSRRTRAIV 313 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~-~l~h~niv~~~~~~~~~~~~~lv 313 (508)
++|+..+.||+|+||+||+|+. .+|+.||||+++.... ....+.+..|..++. .++||||+++++++.+++..|+|
T Consensus 2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yiv 81 (320)
T d1xjda_ 2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV 81 (320)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEE
Confidence 5788999999999999999998 4689999999964321 123456677777665 68999999999999999999999
Q ss_pred EeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC----------
Q 045127 314 TEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE---------- 382 (508)
Q Consensus 314 ~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~---------- 382 (508)
|||+++|+|.+++. ...+++.++..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||.+
T Consensus 82 mEy~~~g~L~~~i~~~~~~~e~~~~~~~~qi~~al~ylH~~-~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~~~~~ 160 (320)
T d1xjda_ 82 MEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSK-GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT 160 (320)
T ss_dssp EECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCB
T ss_pred EeecCCCcHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC-CeeeccCcccceeecCCCceeccccchhhhcccccccc
Confidence 99999999999998 67899999999999999999999999 9999999999999999999999999874
Q ss_pred -----------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcccCCcchH
Q 045127 383 -----------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMMLTENMF 445 (508)
Q Consensus 383 -----------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 445 (508)
..++.++|||||||++|||+||+.||...... .+...+... .+.+. .
T Consensus 161 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~--~~~~~i~~~---------~~~~p--~--- 224 (320)
T d1xjda_ 161 NTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE--ELFHSIRMD---------NPFYP--R--- 224 (320)
T ss_dssp CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHC---------CCCCC--T---
T ss_pred cccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHH--HHHHHHHcC---------CCCCC--c---
Confidence 24567899999999999999999999753221 111111111 01111 0
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCHH-HHHH
Q 045127 446 DQAEQGLGLGLMCTDQPTGKLPSLV-QIYN 474 (508)
Q Consensus 446 ~~~~~l~~l~~~Cl~~dP~~RPs~~-evl~ 474 (508)
.....+.+++.+||+.||++|||+. |+++
T Consensus 225 ~~s~~~~dli~~~L~~dP~~R~s~~~~l~~ 254 (320)
T d1xjda_ 225 WLEKEAKDLLVKLFVREPEKRLGVRGDIRQ 254 (320)
T ss_dssp TSCHHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred cCCHHHHHHHHHhcccCCCCCcCHHHHHHh
Confidence 1134577899999999999999995 7764
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.5e-42 Score=340.24 Aligned_cols=224 Identities=12% Similarity=0.158 Sum_probs=174.4
Q ss_pred hhcCCCCCc-eeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhc-CCCCccceeeEEec----CC
Q 045127 236 ATNGFSKKN-LVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQF-QHKNLIRVLGWNNS----RR 308 (508)
Q Consensus 236 ~~~~~~~~~-~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~----~~ 308 (508)
..++|++.. .||+|+||+||+|+. .+++.||||+++.. ..+.+|+.++.++ +||||+++++++.+ ..
T Consensus 9 i~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~------~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~ 82 (335)
T d2ozaa1 9 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC------PKARREVELHWRASQCPHIVRIVDVYENLYAGRK 82 (335)
T ss_dssp GGGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECS------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEE
T ss_pred cccCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECCc------HHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCC
Confidence 346888765 599999999999997 57899999999532 4567899987655 89999999999865 35
Q ss_pred eeEEEEeecCCCCHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecC---CCceEEeeccCC
Q 045127 309 TRAIVTEWTNGGNVELWLSE---SAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTD---NLEPLISRFKIE 382 (508)
Q Consensus 309 ~~~lv~e~~~~gsL~~~l~~---~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~---~~~~kl~Dfg~~ 382 (508)
..|+|||||+||+|.+++.. ..+++.++..|+.||+.||+|||++ ||+||||||+|||++. ++.+||+|||++
T Consensus 83 ~~~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~-~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a 161 (335)
T d2ozaa1 83 CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI-NIAHRDVKPENLLYTSKRPNAILKLTDFGFA 161 (335)
T ss_dssp EEEEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred EEEEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHc-CCcccccccccccccccccccccccccccee
Confidence 68999999999999999973 4689999999999999999999999 9999999999999985 567999999874
Q ss_pred C--------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhh
Q 045127 383 Y--------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDE 436 (508)
Q Consensus 383 ~--------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (508)
. .++.++|||||||++|||+||+.||....... ....+..... ..
T Consensus 162 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~--~~~~~~~~i~-------~~ 232 (335)
T d2ozaa1 162 KETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA--ISPGMKTRIR-------MG 232 (335)
T ss_dssp EECCCCCCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC----------CCC-------SC
T ss_pred eeccCCCccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHH--HHHHHHHHHh-------cC
Confidence 2 35678899999999999999999997543221 1111111110 00
Q ss_pred cccCCc-chHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 437 RMMLTE-NMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 437 ~l~~~~-~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
...... ........+.+++.+||+.||++|||+.|+++.
T Consensus 233 ~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~h 272 (335)
T d2ozaa1 233 QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 272 (335)
T ss_dssp SSSCCTTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 000000 011224567889999999999999999999874
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4e-42 Score=331.42 Aligned_cols=216 Identities=19% Similarity=0.261 Sum_probs=175.4
Q ss_pred hcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCH-----HHHHHHHHHHHHHhhcC--CCCccceeeEEecCC
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSR-----EIRDEFVEECKLLVQFQ--HKNLIRVLGWNNSRR 308 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~-----~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~ 308 (508)
.++|++.+.||+|+||+||+|+. .+|+.||||+++..... ....++.+|+.++++++ ||||+++++++.+++
T Consensus 3 ~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~ 82 (273)
T d1xwsa_ 3 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPD 82 (273)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSS
T ss_pred CCeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCC
Confidence 35799999999999999999997 57899999998643211 12234678999999996 899999999999999
Q ss_pred eeEEEEeecCC-CCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecC-CCceEEeeccCCC--
Q 045127 309 TRAIVTEWTNG-GNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTD-NLEPLISRFKIEY-- 383 (508)
Q Consensus 309 ~~~lv~e~~~~-gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~-~~~~kl~Dfg~~~-- 383 (508)
..++||||+.+ +++.+++. ...+++.++..++.||++||+|||++ ||+||||||+|||++. ++.+||+|||++.
T Consensus 83 ~~~lv~e~~~~~~~l~~~~~~~~~l~e~~~~~~~~qi~~al~~lH~~-~iiHrDiKp~NIll~~~~~~vkl~DFG~a~~~ 161 (273)
T d1xwsa_ 83 SFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSGALL 161 (273)
T ss_dssp EEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred eEEEEEEeccCcchHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC-CCccccCcccceEEecCCCeEEECccccceec
Confidence 99999999976 67888776 67899999999999999999999999 9999999999999985 4799999999852
Q ss_pred -----------------------C-CCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhccc
Q 045127 384 -----------------------Q-HRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERMM 439 (508)
Q Consensus 384 -----------------------~-~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 439 (508)
. ++.++||||+||++|||+||+.||.... .... ....
T Consensus 162 ~~~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~-------~i~~------------~~~~ 222 (273)
T d1xwsa_ 162 KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-------EIIR------------GQVF 222 (273)
T ss_dssp CSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-------HHHH------------CCCC
T ss_pred ccccccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCch-------HHhh------------cccC
Confidence 1 2346899999999999999999997421 0011 0110
Q ss_pred CCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 440 LTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 440 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
... ....++.+++.+||+.||++|||++|+++.
T Consensus 223 ~~~---~~s~~~~~li~~~L~~dp~~R~s~~eil~h 255 (273)
T d1xwsa_ 223 FRQ---RVSSECQHLIRWCLALRPSDRPTFEEIQNH 255 (273)
T ss_dssp CSS---CCCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred CCC---CCCHHHHHHHHHHccCCHhHCcCHHHHhcC
Confidence 000 113456788999999999999999999873
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.9e-41 Score=328.89 Aligned_cols=237 Identities=14% Similarity=0.154 Sum_probs=185.3
Q ss_pred cCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCC-HHHHHHHHHHHHHHhhcCCCCccceeeEEecCCeeEEEEe
Q 045127 238 NGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVS-REIRDEFVEECKLLVQFQHKNLIRVLGWNNSRRTRAIVTE 315 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 315 (508)
++|++.+.||+|+||+||+|++ .+++.||||+++.... .....++.+|+.++++++||||+++++++......+++||
T Consensus 2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~ 81 (292)
T d1unla_ 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEee
Confidence 5789999999999999999997 5789999999964432 3457889999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC-----------
Q 045127 316 WTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY----------- 383 (508)
Q Consensus 316 ~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~----------- 383 (508)
++.++++..++. ...+++..+..++.|++.||+|||++ ||+||||||+|||++.++.+|++|||.+.
T Consensus 82 ~~~~~~l~~~~~~~~~~~~~~~~~~~~q~~~aL~~lH~~-~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~~~~~~ 160 (292)
T d1unla_ 82 FCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR-NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSA 160 (292)
T ss_dssp CCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTCCEEECCCTTCEECCSCCSCCCS
T ss_pred eccccccccccccccccchhHHHHHHHHHHHHHHHhhcC-CEeeecccCcccccccCCceeeeecchhhcccCCCcccee
Confidence 999999988877 66889999999999999999999999 99999999999999999999999998741
Q ss_pred -----------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccc--h----hhhhhhhc---
Q 045127 384 -----------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPE--N----LQLVVDER--- 437 (508)
Q Consensus 384 -----------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~~--- 437 (508)
.++.++||||+||++|||++|+.||.........+.......... . .....+..
T Consensus 161 ~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (292)
T d1unla_ 161 EVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYP 240 (292)
T ss_dssp CCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCC
T ss_pred eccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhcccccccc
Confidence 246789999999999999999999754332222222111111110 0 00000000
Q ss_pred -c----cCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 438 -M----MLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 438 -l----~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
. ............+.+++.+|++.||.+|||++|+++.
T Consensus 241 ~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~H 283 (292)
T d1unla_ 241 MYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp CCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred cccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 0 0000001123457788999999999999999999863
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.9e-41 Score=332.68 Aligned_cols=238 Identities=14% Similarity=0.139 Sum_probs=180.2
Q ss_pred hhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecCC----ee
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRR----TR 310 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~----~~ 310 (508)
.+.+|+..+.||+|+||+||+|.. .+|+.||||+++........+.+.+|+.+|++++||||+++++++.... ..
T Consensus 6 i~~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~ 85 (345)
T d1pmea_ 6 VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD 85 (345)
T ss_dssp CCTTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCC
T ss_pred cCCCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccce
Confidence 346799999999999999999997 5799999999976555666778999999999999999999999987543 23
Q ss_pred EEEEeecCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC--------
Q 045127 311 AIVTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE-------- 382 (508)
Q Consensus 311 ~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~-------- 382 (508)
+++++|+.+|+|.+++....+++..+..++.|++.||+|||++ ||+||||||+|||++.++.+||+|||++
T Consensus 86 ~~l~~~~~~g~L~~~l~~~~l~~~~i~~i~~qil~al~yLH~~-~iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~~~~ 164 (345)
T d1pmea_ 86 VYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD 164 (345)
T ss_dssp EEEEEECCCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTCCEEECCCTTCEECCGGGC
T ss_pred EEEEEeecCCchhhhhhcCCCCHHHHHHHHHHHHHHHHHHHHC-CCcCCCCCcceEEECCCCCEEEcccCceeeccCCCc
Confidence 5556677799999999988999999999999999999999999 9999999999999999999999999864
Q ss_pred -----------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccch----------
Q 045127 383 -----------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPEN---------- 429 (508)
Q Consensus 383 -----------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~---------- 429 (508)
..++.++||||+||++|||++|+.||........ ............
T Consensus 165 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 243 (345)
T d1pmea_ 165 HTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ-LNHILGILGSPSQEDLNCIINL 243 (345)
T ss_dssp BCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCSCCHHHHHTCCCH
T ss_pred cceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHH-HHHHhhhccCCChhhhhhhhhh
Confidence 1345678999999999999999999975432211 111111100000
Q ss_pred -hhhhhhhcccCCcchH-----HHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 430 -LQLVVDERMMLTENMF-----DQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 430 -~~~~~~~~l~~~~~~~-----~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
................ ....++.+++.+|++.||++|||++|+++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~h 295 (345)
T d1pmea_ 244 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 295 (345)
T ss_dssp HHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred hhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 0000000000000000 012457789999999999999999999975
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.9e-40 Score=330.99 Aligned_cols=242 Identities=13% Similarity=0.163 Sum_probs=180.4
Q ss_pred hhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCC-CHHHHHHHHHHHHHHhhcCCCCccceeeEEecCC-----
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDV-SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSRR----- 308 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~----- 308 (508)
..++|++.+.||+|+||+||+|.. .+|+.||||+++... .....+.+.+|+++|++++|||||++++++...+
T Consensus 16 ~~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~ 95 (346)
T d1cm8a_ 16 VRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDF 95 (346)
T ss_dssp CBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTC
T ss_pred cCCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCcccccc
Confidence 346899999999999999999997 569999999997543 3445678999999999999999999999997654
Q ss_pred -eeEEEEeecCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC-----
Q 045127 309 -TRAIVTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE----- 382 (508)
Q Consensus 309 -~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~----- 382 (508)
..|+||||+ +++|..+.+...+++..+..++.||+.||+|||++ ||+||||||+|||++.++.+|++|||.+
T Consensus 96 ~~~~lv~e~~-~~~l~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~-~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~~~ 173 (346)
T d1cm8a_ 96 TDFYLVMPFM-GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAA-GIIHRDLKPGNLAVNEDCELKILDFGLARQADS 173 (346)
T ss_dssp CCCEEEEECC-SEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred ceEEEEEecc-cccHHHHHHhccccHHHHHHHHHHHHHHHHHHHhC-CCcccccCcchhhcccccccccccccceeccCC
Confidence 569999999 66898888888999999999999999999999999 9999999999999999999999999874
Q ss_pred --------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhcc--chh--------hh
Q 045127 383 --------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYP--ENL--------QL 432 (508)
Q Consensus 383 --------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~--~~~--------~~ 432 (508)
..++.++||||+||++|||++|+.||....... .+......... ... ..
T Consensus 174 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (346)
T d1cm8a_ 174 EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLD-QLKEIMKVTGTPPAEFVQRLQSDEAK 252 (346)
T ss_dssp SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCHHHHHTCSCHHHH
T ss_pred ccccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHH-HHHHHHhccCCCcHHHHhhhcchhhh
Confidence 234678999999999999999999997543211 11111111100 000 00
Q ss_pred hhhhcc---cCCc---chHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH--HHHHH
Q 045127 433 VVDERM---MLTE---NMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM--ITRAY 480 (508)
Q Consensus 433 ~~~~~l---~~~~---~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~--L~~i~ 480 (508)
.....+ .... ........+.+++.+||..||++|||++|+++. ++.+.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~~~ 308 (346)
T d1cm8a_ 253 NYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLH 308 (346)
T ss_dssp HHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred hhhccCCcccccchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhCcCC
Confidence 000000 0000 000113456789999999999999999999985 55443
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-40 Score=331.48 Aligned_cols=236 Identities=11% Similarity=0.107 Sum_probs=175.3
Q ss_pred CCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccceeeEEecC------CeeE
Q 045127 239 GFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRVLGWNNSR------RTRA 311 (508)
Q Consensus 239 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------~~~~ 311 (508)
+|+..++||+|+||+||+|++ .+|+.||||++..... ...+|++++++++||||+++++++... .+.+
T Consensus 21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~-----~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~ 95 (350)
T d1q5ka_ 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 95 (350)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS-----SCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEE
T ss_pred CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccch-----HHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEE
Confidence 588889999999999999998 4699999999965432 234799999999999999999998542 3568
Q ss_pred EEEeecCCCCHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCC-ceEEeeccCC----
Q 045127 312 IVTEWTNGGNVELWLS----ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNL-EPLISRFKIE---- 382 (508)
Q Consensus 312 lv~e~~~~gsL~~~l~----~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~-~~kl~Dfg~~---- 382 (508)
+|||||+++.+..+.. ...+++.++..++.||+.||+|||++ ||+||||||+|||++.++ .+||+|||++
T Consensus 96 lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~-~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~~ 174 (350)
T d1q5ka_ 96 LVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF-GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 174 (350)
T ss_dssp EEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT-TEECCCCCGGGEEECTTTCCEEECCCTTCEECC
T ss_pred EEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhc-CCcccCCCcceEEEecCCCceeEecccchhhcc
Confidence 9999998764444332 56799999999999999999999999 999999999999999765 8999999874
Q ss_pred -----------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccc--h-hhhhh--
Q 045127 383 -----------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPE--N-LQLVV-- 434 (508)
Q Consensus 383 -----------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~--~-~~~~~-- 434 (508)
..++.++||||+||++|||++|+.||......+ .+....+..... . .....
T Consensus 175 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~-~l~~i~~~~g~~~~~~~~~~~~~ 253 (350)
T d1q5ka_ 175 RGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD-QLVEIIKVLGTPTREQIREMNPN 253 (350)
T ss_dssp TTSCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHH-HHHHHHHHHCCCCHHHHHHHCC-
T ss_pred CCcccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHH-HHHHHHHHhCCChHHhhhhhccc
Confidence 245788999999999999999999997543211 111111111000 0 00000
Q ss_pred --hhcccC---C----cchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH--HHHHHh
Q 045127 435 --DERMML---T----ENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM--ITRAYK 481 (508)
Q Consensus 435 --~~~l~~---~----~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~--L~~i~~ 481 (508)
+..+.. . .........+.+++.+||+.||++|||+.|+++. ++++..
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~ 311 (350)
T d1q5ka_ 254 YTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRD 311 (350)
T ss_dssp --CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGGC
T ss_pred hhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccccC
Confidence 000000 0 0001124457788999999999999999999974 566544
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2e-40 Score=325.07 Aligned_cols=239 Identities=13% Similarity=0.159 Sum_probs=175.4
Q ss_pred HhhcCCCCCceeeecCCeEEEEEEE-CC-CCEEEEEEecCCCCH-HHHHHHHHHHHHHhhc---CCCCccceeeEEec--
Q 045127 235 AATNGFSKKNLVGKNEGAAIYKGIL-RD-GTRVKIEIYKGDVSR-EIRDEFVEECKLLVQF---QHKNLIRVLGWNNS-- 306 (508)
Q Consensus 235 ~~~~~~~~~~~lg~G~~g~V~~~~~-~~-~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l---~h~niv~~~~~~~~-- 306 (508)
+..++|++.+.||+|+||+||+|++ .+ ++.||||+++..... .....+.+|+.+++.+ +||||+++++++..
T Consensus 4 ~~~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~ 83 (305)
T d1blxa_ 4 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR 83 (305)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred CCcCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccc
Confidence 3457899999999999999999997 34 567999998643222 1233456777776665 79999999998853
Q ss_pred ---CCeeEEEEeecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccC
Q 045127 307 ---RRTRAIVTEWTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKI 381 (508)
Q Consensus 307 ---~~~~~lv~e~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~ 381 (508)
....+++|||++++++..... ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||.
T Consensus 84 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~-~ivHrDiKp~NILi~~~~~~kl~dfg~ 162 (305)
T d1blxa_ 84 TDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH-RVVHRDLKPQNILVTSSGQIKLADFGL 162 (305)
T ss_dssp CSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTCCEEECSCCS
T ss_pred cccCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHhC-CEEecCCCccEEEEcCCCCeeecchhh
Confidence 246799999999887765543 66789999999999999999999999 999999999999999999999999987
Q ss_pred C--------------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccch---hh-
Q 045127 382 E--------------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPEN---LQ- 431 (508)
Q Consensus 382 ~--------------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~---~~- 431 (508)
+ ..++.++||||+||++|||++|+.||....... .+........... ..
T Consensus 163 ~~~~~~~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~ 241 (305)
T d1blxa_ 163 ARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD-QLGKILDVIGLPGEEDWPR 241 (305)
T ss_dssp CCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCGGGSCT
T ss_pred hhhhcccccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHH-HHHHHHHhhCCCchhcccc
Confidence 3 356789999999999999999999997543211 1111111111000 00
Q ss_pred ------hhhhhcccCC--cchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 432 ------LVVDERMMLT--ENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 432 ------~~~~~~l~~~--~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
.......... .........+.+++.+||+.||++|||++|+++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~H 293 (305)
T d1blxa_ 242 DVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 293 (305)
T ss_dssp TCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred cccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 0000000000 0000113456788999999999999999999864
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.6e-40 Score=325.10 Aligned_cols=237 Identities=11% Similarity=0.109 Sum_probs=177.7
Q ss_pred hcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCC-HHHHHHHHHHHHHHhhcCCCCccceeeEEec--------
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVS-REIRDEFVEECKLLVQFQHKNLIRVLGWNNS-------- 306 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-------- 306 (508)
.++|++.+.||+|+||+||+|++ .+|+.||||++..... .....++.+|+++|++++||||+++++++..
T Consensus 9 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~ 88 (318)
T d3blha1 9 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 88 (318)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC--------
T ss_pred cCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeeccccccccc
Confidence 57899999999999999999997 5799999999854322 2345678899999999999999999998865
Q ss_pred CCeeEEEEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC---
Q 045127 307 RRTRAIVTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE--- 382 (508)
Q Consensus 307 ~~~~~lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~--- 382 (508)
....++||||++++.+..... ...+++..+..++.|++.||.|||++ ||+||||||+|||++.++.+|++|||++
T Consensus 89 ~~~~~iv~e~~~~~~~~~~~~~~~~~~~~~~~~i~~qil~~l~~lH~~-~ivHrDlKp~NILl~~~~~~kl~dfg~~~~~ 167 (318)
T d3blha1 89 KGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRN-KILHRDMKAANVLITRDGVLKLADFGLARAF 167 (318)
T ss_dssp --CEEEEEECCCEEHHHHHTCTTCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred CceEEEEEeccCCCccchhhhcccccccHHHHHHHHHHHHHHHHhccC-CEEecCcCchheeecCCCcEEeeecceeeec
Confidence 345799999998887776655 67889999999999999999999999 9999999999999999999999999874
Q ss_pred -----------------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHH--hccchhh
Q 045127 383 -----------------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRM--HYPENLQ 431 (508)
Q Consensus 383 -----------------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~--~~~~~~~ 431 (508)
..++.++||||+||++|||++|+.||....... .+...... .......
T Consensus 168 ~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~ 246 (318)
T d3blha1 168 SLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQH-QLALISQLCGSITPEVW 246 (318)
T ss_dssp CC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCTTTS
T ss_pred ccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHH-HHHHHHHhcCCCChhhc
Confidence 135678999999999999999999997533211 11111111 1111100
Q ss_pred hh---------hhhcccCCcchH------HHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 432 LV---------VDERMMLTENMF------DQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 432 ~~---------~~~~l~~~~~~~------~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
.. ............ .....+.+++.+||+.||++|||++|+++.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~H 305 (318)
T d3blha1 247 PNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 305 (318)
T ss_dssp TTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred cccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcC
Confidence 00 000000000000 113456789999999999999999999864
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.5e-40 Score=327.68 Aligned_cols=224 Identities=13% Similarity=0.134 Sum_probs=180.1
Q ss_pred cCCCCCceeeecCCeEEEEEEE----CCCCEEEEEEecCCC---CHHHHHHHHHHHHHHhhcCC-CCccceeeEEecCCe
Q 045127 238 NGFSKKNLVGKNEGAAIYKGIL----RDGTRVKIEIYKGDV---SREIRDEFVEECKLLVQFQH-KNLIRVLGWNNSRRT 309 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~----~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h-~niv~~~~~~~~~~~ 309 (508)
++|+..+.||+|+||+||+|+. .+|+.||||+++... .....+.+.+|++++++++| |||+++++++.+...
T Consensus 24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~ 103 (322)
T d1vzoa_ 24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK 103 (322)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCc
Confidence 6799999999999999999986 247899999985432 11234568899999999976 899999999999999
Q ss_pred eEEEEeecCCCCHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC------
Q 045127 310 RAIVTEWTNGGNVELWLS-ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE------ 382 (508)
Q Consensus 310 ~~lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~------ 382 (508)
.+++|||+.+|+|.+++. ...+++..+..++.|++.||+|+|++ +|+||||||+||+++.++.+||+|||++
T Consensus 104 ~~~v~e~~~~~~L~~~i~~~~~~~e~~~~~~~~Qi~~al~~lH~~-~ivHrDiKp~Nill~~~~~vkL~DFG~a~~~~~~ 182 (322)
T d1vzoa_ 104 LHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKL-GIIYRDIKLENILLDSNGHVVLTDFGLSKEFVAD 182 (322)
T ss_dssp EEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTSCEEESCSSEEEECCGG
T ss_pred eeeeeecccccHHHHHHHhcccccHHHHHHHHHHHHHHHHHhhcC-CEEeccCCccceeecCCCCEEEeeccchhhhccc
Confidence 999999999999999998 66788999999999999999999999 9999999999999999999999999873
Q ss_pred ------------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccchhhhhhhhcc
Q 045127 383 ------------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPENLQLVVDERM 438 (508)
Q Consensus 383 ------------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 438 (508)
..++.++|||||||++|||++|+.||........ ........ .....
T Consensus 183 ~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~-~~~i~~~~--------~~~~~ 253 (322)
T d1vzoa_ 183 ETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS-QAEISRRI--------LKSEP 253 (322)
T ss_dssp GGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCC-HHHHHHHH--------HHCCC
T ss_pred ccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHhc--------ccCCC
Confidence 1346689999999999999999999976543321 11111111 11111
Q ss_pred cCCcchHHHHHHHHHHHHhcCCCCCCCCC-----CHHHHHH
Q 045127 439 MLTENMFDQAEQGLGLGLMCTDQPTGKLP-----SLVQIYN 474 (508)
Q Consensus 439 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~ 474 (508)
... .....++.+++.+||++||++|| |++|+++
T Consensus 254 ~~~---~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~ 291 (322)
T d1vzoa_ 254 PYP---QEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKE 291 (322)
T ss_dssp CCC---TTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHT
T ss_pred CCc---ccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHc
Confidence 111 12245677889999999999999 5889886
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8e-40 Score=326.75 Aligned_cols=238 Identities=13% Similarity=0.148 Sum_probs=181.2
Q ss_pred hhcCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCC-CHHHHHHHHHHHHHHhhcCCCCccceeeEEecC-----C
Q 045127 236 ATNGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDV-SREIRDEFVEECKLLVQFQHKNLIRVLGWNNSR-----R 308 (508)
Q Consensus 236 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-----~ 308 (508)
..++|++.+.||+|+||+||+|+. .+|+.||||+++... .....+++.+|++++++++||||+++++++... .
T Consensus 16 ~~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~ 95 (348)
T d2gfsa1 16 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 95 (348)
T ss_dssp EETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTC
T ss_pred CCCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccC
Confidence 357899999999999999999997 579999999997543 334567789999999999999999999998643 3
Q ss_pred eeEEEEeecCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC------
Q 045127 309 TRAIVTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE------ 382 (508)
Q Consensus 309 ~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~------ 382 (508)
..+++|+|+.+|+|.+++....+++.++..++.||+.||+|||++ ||+||||||+|||++.++.+|++|||.+
T Consensus 96 ~~~~i~~~~~gg~L~~~~~~~~l~e~~~~~i~~qil~aL~~LH~~-giiHrDiKp~NILi~~~~~~kl~dfg~a~~~~~~ 174 (348)
T d2gfsa1 96 NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE 174 (348)
T ss_dssp CCCEEEEECCSEEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTCCEEECCC----CCTGG
T ss_pred ceEEEEEeecCCchhhhcccccccHHHHHHHHHHHHHHHHHHHhC-CCcccccCCccccccccccccccccchhcccCcc
Confidence 346677888899999999988999999999999999999999999 9999999999999999999999999874
Q ss_pred -------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccc----------h-hhh
Q 045127 383 -------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPE----------N-LQL 432 (508)
Q Consensus 383 -------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~----------~-~~~ 432 (508)
..++.++||||+||++|+|++|+.||....... ............ . ...
T Consensus 175 ~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~ 253 (348)
T d2gfsa1 175 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID-QLKLILRLVGTPGAELLKKISSESARN 253 (348)
T ss_dssp GSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCHHHHTTCCCHHHHH
T ss_pred cccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcCCCChHHhhhccchhhhh
Confidence 235788999999999999999999997533111 111111111000 0 000
Q ss_pred hhhhcccCCcch-----HHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 433 VVDERMMLTENM-----FDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 433 ~~~~~l~~~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
............ ......+.+++.+|++.||++|||++|+++.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~H 301 (348)
T d2gfsa1 254 YIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 301 (348)
T ss_dssp HHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcC
Confidence 000000000000 0113457789999999999999999999974
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Probab=100.00 E-value=1.2e-39 Score=322.67 Aligned_cols=230 Identities=13% Similarity=0.172 Sum_probs=176.4
Q ss_pred cCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcC-CCCccceeeEEec--CCeeEEE
Q 045127 238 NGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQ-HKNLIRVLGWNNS--RRTRAIV 313 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~--~~~~~lv 313 (508)
++|++.++||+|+||+||+|+. .+|+.||||+++.. ..+++.+|+++|++++ ||||+++++++.. ....++|
T Consensus 35 d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~----~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v 110 (328)
T d3bqca1 35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV----KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALV 110 (328)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSS----CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEE
T ss_pred cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHH----HHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEE
Confidence 5799999999999999999997 57899999999643 2467889999999995 9999999999874 4568999
Q ss_pred EeecCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCC-ceEEeeccCC----------
Q 045127 314 TEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNL-EPLISRFKIE---------- 382 (508)
Q Consensus 314 ~e~~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~-~~kl~Dfg~~---------- 382 (508)
|||+++++|..+. ..+++.++..++.||+.||+|||++ ||+||||||+|||++.++ .+|++|||.+
T Consensus 111 ~e~~~~~~L~~~~--~~l~e~~i~~i~~qil~aL~~LH~~-gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~~~~~ 187 (328)
T d3bqca1 111 FEHVNNTDFKQLY--QTLTDYDIRFYMYEILKALDYCHSM-GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYN 187 (328)
T ss_dssp EECCCSCBGGGTT--TSCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEEETTTTEEEECCGGGCEECCTTCCCC
T ss_pred EeecCCCcHHHHh--cCCCHHHHHHHHHHHHHHHHHHhhc-ccccccccccceEEcCCCCeeeecccccceeccCCCccc
Confidence 9999999998774 5799999999999999999999999 999999999999998654 6999999874
Q ss_pred -----------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHhccch---------------h
Q 045127 383 -----------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMHYPEN---------------L 430 (508)
Q Consensus 383 -----------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~---------------~ 430 (508)
..++.++||||+||++|||++|+.||...................+. .
T Consensus 188 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~ 267 (328)
T d3bqca1 188 VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRF 267 (328)
T ss_dssp SCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCGGG
T ss_pred ccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcccccCccc
Confidence 13567899999999999999999999754322111111111000000 0
Q ss_pred hhhhhh-------cccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 045127 431 QLVVDE-------RMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYN 474 (508)
Q Consensus 431 ~~~~~~-------~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 474 (508)
...... .............++.+++.+|++.||++|||++|+++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~ 318 (328)
T d3bqca1 268 NDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 318 (328)
T ss_dssp GGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred chhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 000000 00000011112456788999999999999999999986
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=100.00 E-value=1e-38 Score=310.64 Aligned_cols=233 Identities=11% Similarity=0.108 Sum_probs=184.4
Q ss_pred cCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCC-CCccceeeEEecCCeeEEEEe
Q 045127 238 NGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQH-KNLIRVLGWNNSRRTRAIVTE 315 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~~~~~~~~~~~~~lv~e 315 (508)
++|++.+.||+|+||+||+|++ .+|+.||||++..... ...+.+|++.++.++| +|++.+++++..+...++|||
T Consensus 5 ~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~---~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme 81 (293)
T d1csna_ 5 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD---APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID 81 (293)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT---SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred CceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEccccC---cHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEE
Confidence 5799999999999999999997 4689999999864432 2456788999999975 899999999999999999999
Q ss_pred ecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecC-----CCceEEeeccCCC-----
Q 045127 316 WTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTD-----NLEPLISRFKIEY----- 383 (508)
Q Consensus 316 ~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~-----~~~~kl~Dfg~~~----- 383 (508)
|+ +++|.+++. ...+++.++..++.|++.||+|||++ ||+||||||+|||++. ++.+||+|||++.
T Consensus 82 ~~-~~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~~-giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~ 159 (293)
T d1csna_ 82 LL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEK-SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDP 159 (293)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTT-TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCT
T ss_pred ec-CCCHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHC-CceeccCCccceeecCcccccCCceEEcccceeEEcccC
Confidence 99 689999887 56799999999999999999999999 9999999999999974 5789999999752
Q ss_pred -----------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCcc-cHHHHHHHh-ccchhhh
Q 045127 384 -----------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEA-GFIEYIRMH-YPENLQL 432 (508)
Q Consensus 384 -----------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~-~~~~~~~~~-~~~~~~~ 432 (508)
.++.++|||||||++|||+||+.||........ .....+... ......+
T Consensus 160 ~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 239 (293)
T d1csna_ 160 VTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRE 239 (293)
T ss_dssp TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHH
T ss_pred ccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccCCCChHH
Confidence 245678999999999999999999975443221 111111100 0000111
Q ss_pred hhhhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhCCC
Q 045127 433 VVDERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKSCPI 485 (508)
Q Consensus 433 ~~~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~ 485 (508)
. .+ ..+.++.+++..|++.+|++||+++.+.+.|+++.+....
T Consensus 240 l-~~---------~~p~~l~~ii~~~~~~~~~~rP~y~~l~~~l~~~~~~~~~ 282 (293)
T d1csna_ 240 L-CA---------GFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNT 282 (293)
T ss_dssp H-TT---------TSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred h-cC---------CCCHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHHHcCC
Confidence 0 00 1134577888899999999999999999999998776543
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=5.5e-39 Score=313.78 Aligned_cols=230 Identities=13% Similarity=0.144 Sum_probs=175.6
Q ss_pred cCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCccce-eeEEecCCeeEEEEe
Q 045127 238 NGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNLIRV-LGWNNSRRTRAIVTE 315 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~-~~~~~~~~~~~lv~e 315 (508)
++|+..+.||+|+||.||+|++ .+|+.||||++..... ..++..|+++++.++|++++.. .+++..++..++|||
T Consensus 7 ~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~---~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme 83 (299)
T d1ckia_ 7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK---HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 83 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTT---SCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred CEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhcc---CHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEE
Confidence 5699999999999999999997 5689999999865432 2457889999999987765554 555667888899999
Q ss_pred ecCCCCHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEec---CCCceEEeeccCCC-------
Q 045127 316 WTNGGNVELWLS--ESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLT---DNLEPLISRFKIEY------- 383 (508)
Q Consensus 316 ~~~~gsL~~~l~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~---~~~~~kl~Dfg~~~------- 383 (508)
|+ ++++.+.+. ...+++..+..++.|++.||+|||++ ||+||||||+|||++ .+..+|++|||++.
T Consensus 84 ~~-~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~ 161 (299)
T d1ckia_ 84 LL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK-NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART 161 (299)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTT
T ss_pred Ec-CCchhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHHC-CeeeccCCHhhccccccCCCceeeeeccCcceecccccc
Confidence 99 556666655 67899999999999999999999999 999999999999986 45679999998742
Q ss_pred ---------------------------CCCCcchhhHHHHHHHHHHhCCCCCcccccCccc--HHHHHHHhccchhhhhh
Q 045127 384 ---------------------------QHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAG--FIEYIRMHYPENLQLVV 434 (508)
Q Consensus 384 ---------------------------~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 434 (508)
.++.++|||||||++|||+||+.||......... ................
T Consensus 162 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 240 (299)
T d1ckia_ 162 HQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL- 240 (299)
T ss_dssp CCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHHSCHHHH-
T ss_pred ccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccCCCChhHh-
Confidence 2456889999999999999999999765432211 1111111000000000
Q ss_pred hhcccCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhh
Q 045127 435 DERMMLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNMITRAYKS 482 (508)
Q Consensus 435 ~~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 482 (508)
.+ ....++.+++..||+.||++||+++++.+.|+++...
T Consensus 241 ~~---------~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~~~ 279 (299)
T d1ckia_ 241 CK---------GYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR 279 (299)
T ss_dssp TT---------TSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHHH
T ss_pred cc---------CCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHHH
Confidence 00 1135577889999999999999999999999987543
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.5e-38 Score=318.04 Aligned_cols=235 Identities=12% Similarity=0.103 Sum_probs=179.4
Q ss_pred hcCCCCCceeeecCCeEEEEEEEC-CCCEEEEEEecCCC-CHHHHHHHHHHHHHHhhcCCCCccceeeEEec------CC
Q 045127 237 TNGFSKKNLVGKNEGAAIYKGILR-DGTRVKIEIYKGDV-SREIRDEFVEECKLLVQFQHKNLIRVLGWNNS------RR 308 (508)
Q Consensus 237 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~------~~ 308 (508)
.++|++.++||+|+||+||+|++. +|+.||||++.... ......++.+|+.++++++||||+++++++.. ..
T Consensus 16 ~~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~ 95 (355)
T d2b1pa1 16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 95 (355)
T ss_dssp ETTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCc
Confidence 367999999999999999999984 69999999997543 34456778999999999999999999999864 36
Q ss_pred eeEEEEeecCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCC------
Q 045127 309 TRAIVTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIE------ 382 (508)
Q Consensus 309 ~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~------ 382 (508)
..|+||||+.++.+.. + ...+++..+..++.||+.||+|||++ ||+||||||+|||++.++.+|++|||.+
T Consensus 96 ~~~iv~Ey~~~~l~~~-~-~~~~~~~~i~~~~~qil~gl~~LH~~-giiHrDlKP~Nil~~~~~~~kl~df~~~~~~~~~ 172 (355)
T d2b1pa1 96 DVYLVMELMDANLCQV-I-QMELDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 172 (355)
T ss_dssp EEEEEEECCSEEHHHH-H-TSCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTCCEEECCCCC-------
T ss_pred eeEEEEeccchHHHHh-h-hcCCCHHHHHHHHHHHHHHHHHhhhc-ccccccCCccccccccccceeeechhhhhccccc
Confidence 7899999997755544 4 35789999999999999999999999 9999999999999999999999999762
Q ss_pred --------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCcccHHHHHHHh----------ccchhhh
Q 045127 383 --------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGEAGFIEYIRMH----------YPENLQL 432 (508)
Q Consensus 383 --------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~~~~~~~~~~~----------~~~~~~~ 432 (508)
..++.++||||+||++|||++|+.||....... ......... .......
T Consensus 173 ~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~ 251 (355)
T d2b1pa1 173 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID-QWNKVIEQLGTPCPEFMKKLQPTVRN 251 (355)
T ss_dssp --------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCHHHHTTSCHHHHH
T ss_pred cccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHH-HHHHHHHhccCCCHHHHHHhhhhHHH
Confidence 356789999999999999999999996432111 111111100 0000111
Q ss_pred ---------------hhhhcc--cCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 045127 433 ---------------VVDERM--MLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM 475 (508)
Q Consensus 433 ---------------~~~~~l--~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 475 (508)
...... ............+.+++.+|++.||++|||++|+++.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~H 311 (355)
T d2b1pa1 252 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 311 (355)
T ss_dssp HHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 111111 0111122346678899999999999999999999865
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=9.2e-34 Score=284.02 Aligned_cols=239 Identities=13% Similarity=0.113 Sum_probs=170.2
Q ss_pred cCCCCCceeeecCCeEEEEEEE-CCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcC-----------CCCccceeeEEe
Q 045127 238 NGFSKKNLVGKNEGAAIYKGIL-RDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQ-----------HKNLIRVLGWNN 305 (508)
Q Consensus 238 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~~~~~~~ 305 (508)
++|++.++||+|+||+||+|+. .+|+.||||+++.. ....+.+.+|+++++.++ |+||+++++++.
T Consensus 13 ~rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~--~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~ 90 (362)
T d1q8ya_ 13 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD--KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 90 (362)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC--HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred CcEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEecc--ccchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEee
Confidence 4599999999999999999997 57999999999643 223567788998888775 578999998876
Q ss_pred c--CCeeEEEEeecCCCCHHHH-hc---cCCCCHHHHHHHHHHHHHHHHHHhh-CCCccccCCCCCCEEecCCC------
Q 045127 306 S--RRTRAIVTEWTNGGNVELW-LS---ESAPSWKHRLKVLIGVVEAMCYLQE-QWPEVDYDLRTGSVLLTDNL------ 372 (508)
Q Consensus 306 ~--~~~~~lv~e~~~~gsL~~~-l~---~~~l~~~~~~~i~~~i~~~L~~LH~-~~~iiH~Dlkp~NIll~~~~------ 372 (508)
. ....+++|+++..+..... .. ...+++..+..++.||+.||+|||+ . ||+||||||+|||++.++
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~-~IvHrDlKp~NIll~~~~~~~~~~ 169 (362)
T d1q8ya_ 91 HKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRC-GIIHTDIKPENVLMEIVDSPENLI 169 (362)
T ss_dssp EEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT-CEECSCCSGGGEEEEEEETTTTEE
T ss_pred eccccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhc-CcccccCChhHeeeeccCcccccc
Confidence 4 4556677777655543322 22 5678999999999999999999998 6 999999999999998654
Q ss_pred ceEEeeccCC------------------------CCCCCcchhhHHHHHHHHHHhCCCCCcccccCc-----ccHHHHHH
Q 045127 373 EPLISRFKIE------------------------YQHRSTKYVYKFGLFLLEMITNRRPLEEFERGE-----AGFIEYIR 423 (508)
Q Consensus 373 ~~kl~Dfg~~------------------------~~~~~~~Dv~SlGvil~elltg~~P~~~~~~~~-----~~~~~~~~ 423 (508)
.++++|||.+ ..++.++||||+||+++||++|+.||....... ..+...+.
T Consensus 170 ~~kl~dfg~s~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~~~~ 249 (362)
T d1q8ya_ 170 QIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIE 249 (362)
T ss_dssp EEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHH
T ss_pred eeeEeecccccccccccccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHHHHH
Confidence 4899999874 345788999999999999999999997543211 11111111
Q ss_pred Hhc--cchh-------hhhhhh-----cc-------------cCCcchHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH-
Q 045127 424 MHY--PENL-------QLVVDE-----RM-------------MLTENMFDQAEQGLGLGLMCTDQPTGKLPSLVQIYNM- 475 (508)
Q Consensus 424 ~~~--~~~~-------~~~~~~-----~l-------------~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~- 475 (508)
... +... ....+. .+ ............+.+++.+|++.||.+|||++|+++.
T Consensus 250 ~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~Hp 329 (362)
T d1q8ya_ 250 LLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHP 329 (362)
T ss_dssp HHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCG
T ss_pred HhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhcCc
Confidence 100 0000 000000 00 0011123456788999999999999999999999874
Q ss_pred -HHHH
Q 045127 476 -ITRA 479 (508)
Q Consensus 476 -L~~i 479 (508)
+++.
T Consensus 330 ~f~~~ 334 (362)
T d1q8ya_ 330 WLKDT 334 (362)
T ss_dssp GGTTC
T ss_pred ccCCC
Confidence 5544
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.90 E-value=2.7e-24 Score=194.64 Aligned_cols=133 Identities=16% Similarity=0.166 Sum_probs=106.1
Q ss_pred CCCceeeecCCeEEEEEEECCCCEEEEEEecCCCC-----------------HHHHHHHHHHHHHHhhcCCCCccceeeE
Q 045127 241 SKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVS-----------------REIRDEFVEECKLLVQFQHKNLIRVLGW 303 (508)
Q Consensus 241 ~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-----------------~~~~~~~~~E~~~l~~l~h~niv~~~~~ 303 (508)
.+.++||+|+||.||+|...+|+.||||+++.... ........+|...+.++.|++++..+++
T Consensus 3 ~vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~ 82 (191)
T d1zara2 3 AIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAW 82 (191)
T ss_dssp EEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEE
T ss_pred hhCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEe
Confidence 35689999999999999998899999998753211 0113445678899999999999998866
Q ss_pred EecCCeeEEEEeecCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCCCccccCCCCCCEEecCCCceEEeeccCCC
Q 045127 304 NNSRRTRAIVTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQWPEVDYDLRTGSVLLTDNLEPLISRFKIEY 383 (508)
Q Consensus 304 ~~~~~~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~ 383 (508)
.. .+++|||++++.+.+ ++......++.|++++++|||++ ||+||||||+|||++++ .++++|||.+.
T Consensus 83 ~~----~~lvme~~~~~~~~~------l~~~~~~~i~~ql~~~l~~lH~~-giiHrDiKP~NILv~~~-~~~liDFG~a~ 150 (191)
T d1zara2 83 EG----NAVLMELIDAKELYR------VRVENPDEVLDMILEEVAKFYHR-GIVHGDLSQYNVLVSEE-GIWIIDFPQSV 150 (191)
T ss_dssp ET----TEEEEECCCCEEGGG------CCCSCHHHHHHHHHHHHHHHHHT-TEECSCCSTTSEEEETT-EEEECCCTTCE
T ss_pred cC----CEEEEEeeccccccc------hhhHHHHHHHHHHHHHHHHHhhC-CEEEccCChhheeeeCC-CEEEEECCCcc
Confidence 42 379999998866543 34455678999999999999999 99999999999999965 48999999864
Q ss_pred CC
Q 045127 384 QH 385 (508)
Q Consensus 384 ~~ 385 (508)
..
T Consensus 151 ~~ 152 (191)
T d1zara2 151 EV 152 (191)
T ss_dssp ET
T ss_pred cC
Confidence 33
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.63 E-value=8.1e-17 Score=144.91 Aligned_cols=132 Identities=23% Similarity=0.185 Sum_probs=75.3
Q ss_pred cCCcCCCCCccccccCCCCCCcchhcccccccccccccCCCCCcccC-CCccccCCCCCcCeEeCccCcccccCCcc---
Q 045127 19 IMNNCIHNPSLKYCNSSSPMDLNEIFKSTIVASHLCNESKNPNCVES-FPKIDLRSRPKITPLYLSFNFFWKYCPLG--- 94 (508)
Q Consensus 19 ~~~~c~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~L~~~~n~~~~-~p~~~~~~l~~L~~L~L~~N~l~~~~p~~--- 94 (508)
+|..|.|....+.|++.....+|..+. ..+..|.+..|.++. ++...|+++++|+.|+|++|.+.+..+..
T Consensus 2 CP~~C~C~~~~v~Cs~~~L~~iP~~lp-----~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~ 76 (192)
T d1w8aa_ 2 CPAMCHCEGTTVDCTGRGLKEIPRDIP-----LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEG 76 (192)
T ss_dssp CCTTSEEETTEEECTTSCCSSCCSCCC-----TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTT
T ss_pred cCCCCEEcCCEEEEeCCCcCccCCCCC-----CCCCEEEeCCCCCcccccccccCCCceEeeeecccccccccccccccc
Confidence 466787776677787665555554322 233334444455543 44445566666666666666665544322
Q ss_pred ---ccEEEcccCcccCCCChhhhccCCccccccccccccCcCCchhhhcCCccceeccccccccC
Q 045127 95 ---IMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSE 156 (508)
Q Consensus 95 ---l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp~~~~~~l~~L~~l~l~~N~l~~ 156 (508)
+++|+|++|+|++..|..|.++++|++|+|++|+|+ .+|++.|..+++|++|+|++|.+..
T Consensus 77 ~~~L~~L~Ls~N~l~~l~~~~F~~l~~L~~L~L~~N~l~-~i~~~~f~~l~~L~~l~L~~N~~~~ 140 (192)
T d1w8aa_ 77 ASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQIS-CVMPGSFEHLNSLTSLNLASNPFNC 140 (192)
T ss_dssp CTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCC-EECTTSSTTCTTCCEEECTTCCBCC
T ss_pred ccccceeeeccccccccCHHHHhCCCcccccccCCcccc-ccCHHHhcCCccccccccccccccc
Confidence 256666666666555555666666666666666666 4444555666666666666665554
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.58 E-value=2.2e-15 Score=142.64 Aligned_cols=176 Identities=19% Similarity=0.123 Sum_probs=129.9
Q ss_pred cccccccCCCCCCCCCCcCCcCC-CCCccccccCCCCCCcchhcccccccccccccCCCCCcccCCCccccCCCCCcCeE
Q 045127 2 VVEDLNNLHPPPDFNSTIMNNCI-HNPSLKYCNSSSPMDLNEIFKSTIVASHLCNESKNPNCVESFPKIDLRSRPKITPL 80 (508)
Q Consensus 2 ~~~~l~~l~~~~~~~~~~~~~c~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~L~~~~n~~~~~p~~~~~~l~~L~~L 80 (508)
++.+++.|+++.|-...+|..-+ ....+..++...+ .|....... .-..|..|....|.+..++. .+.++++|+.|
T Consensus 29 lp~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N-~l~~l~~~~-~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L 105 (266)
T d1p9ag_ 29 LPKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRA-ELTKLQVDG-TLPVLGTLDLSHNQLQSLPL-LGQTLPALTVL 105 (266)
T ss_dssp CCTTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTS-CCCEEECCS-CCTTCCEEECCSSCCSSCCC-CTTTCTTCCEE
T ss_pred cCcCCCEEECcCCcCCCcCHHHhhccccccccccccc-ccccccccc-cccccccccccccccccccc-ccccccccccc
Confidence 34567777778887777765432 2233444432221 222221111 11245566666678888887 88888999999
Q ss_pred eCccCcccccCCc------cccEEEcccCcccCCCChhhhccCCccccccccccccCcCCchhhhcCCccceeccccccc
Q 045127 81 YLSFNFFWKYCPL------GIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHF 154 (508)
Q Consensus 81 ~L~~N~l~~~~p~------~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp~~~~~~l~~L~~l~l~~N~l 154 (508)
++++|.+.+..+. .+++|++++|.+++..+..+..+++|+.|++++|+|+ .+|++.|..+++|+.|+|++|+|
T Consensus 106 ~l~~~~~~~~~~~~~~~l~~l~~L~l~~n~l~~l~~~~~~~l~~l~~l~l~~N~l~-~~~~~~~~~l~~L~~L~Ls~N~L 184 (266)
T d1p9ag_ 106 DVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLT-ELPAGLLNGLENLDTLLLQENSL 184 (266)
T ss_dssp ECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCS-CCCTTTTTTCTTCCEEECCSSCC
T ss_pred cccccccceeeccccccccccccccccccccceeccccccccccchhccccccccc-ccCccccccccccceeecccCCC
Confidence 9999988764442 3489999999999888888899999999999999999 66658899999999999999999
Q ss_pred cCccccccccccccCCCCccCCCCC-CCC
Q 045127 155 SEMKVSDTKFFQRFNSSSFLHSGLF-PGH 182 (508)
Q Consensus 155 ~~~~~~~~~~l~~l~~~~~~~n~~~-~c~ 182 (508)
+. .++.+..+.+|+.+++.+|+|. .|.
T Consensus 185 ~~-lp~~~~~~~~L~~L~L~~Np~~CdC~ 212 (266)
T d1p9ag_ 185 YT-IPKGFFGSHLLPFAFLHGNPWLCNCE 212 (266)
T ss_dssp CC-CCTTTTTTCCCSEEECCSCCBCCSGG
T ss_pred cc-cChhHCCCCCCCEEEecCCCCCCCcc
Confidence 98 6777778899999999999985 554
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.57 E-value=1.7e-15 Score=136.11 Aligned_cols=116 Identities=22% Similarity=0.262 Sum_probs=103.2
Q ss_pred CCcccCCCccccCCCCCcCeEeCccCcccccCCc-------cccEEEcccCcccCCCChhhhccCCccccccccccccCc
Q 045127 60 PNCVESFPKIDLRSRPKITPLYLSFNFFWKYCPL-------GIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGD 132 (508)
Q Consensus 60 ~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~-------~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~ 132 (508)
.+.+++||+ .+. +++++|+|++|+|++.++. .|+.|+|++|++++..+..|..+++|++|+|++|+|+ .
T Consensus 17 ~~~L~~iP~-~lp--~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~N~l~-~ 92 (192)
T d1w8aa_ 17 GRGLKEIPR-DIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIK-E 92 (192)
T ss_dssp TSCCSSCCS-CCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCC-E
T ss_pred CCCcCccCC-CCC--CCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeecccccc-c
Confidence 467889998 553 6899999999999875542 3499999999999999999999999999999999999 7
Q ss_pred CCchhhhcCCccceeccccccccCccccccccccccCCCCccCCCCC
Q 045127 133 IPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLHSGLF 179 (508)
Q Consensus 133 lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~~~n~~~ 179 (508)
+|+++|.++++|+.|+|++|+|+++++..+..++++..+++.+|++.
T Consensus 93 l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~~l~~L~~l~L~~N~~~ 139 (192)
T d1w8aa_ 93 ISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFN 139 (192)
T ss_dssp ECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBC
T ss_pred cCHHHHhCCCcccccccCCccccccCHHHhcCCcccccccccccccc
Confidence 77689999999999999999999977777889999999999999874
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=99.54 E-value=1.2e-15 Score=147.98 Aligned_cols=81 Identities=28% Similarity=0.461 Sum_probs=69.0
Q ss_pred cEEEcccCcccCCCChhhhccCCccccccccccccCcCCchhhhcCCccceeccccccccCccccccccccccCCCCccC
Q 045127 96 MSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLH 175 (508)
Q Consensus 96 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~~~ 175 (508)
+.|++++|.+++.+| .++.+++|+.|+|++|+++|.+| ..|+++++|++|+|++|+|+| .+|.++.+++|..+++.+
T Consensus 224 ~~l~~~~~~l~~~~~-~~~~~~~L~~L~Ls~N~l~g~iP-~~l~~L~~L~~L~Ls~N~l~g-~iP~~~~L~~L~~l~l~~ 300 (313)
T d1ogqa_ 224 QKIHLAKNSLAFDLG-KVGLSKNLNGLDLRNNRIYGTLP-QGLTQLKFLHSLNVSFNNLCG-EIPQGGNLQRFDVSAYAN 300 (313)
T ss_dssp SEEECCSSEECCBGG-GCCCCTTCCEEECCSSCCEECCC-GGGGGCTTCCEEECCSSEEEE-ECCCSTTGGGSCGGGTCS
T ss_pred ccccccccccccccc-ccccccccccccCccCeecccCC-hHHhCCCCCCEEECcCCcccc-cCCCcccCCCCCHHHhCC
Confidence 456677777665543 57778899999999999999999 789999999999999999999 677888899999999999
Q ss_pred CCCC
Q 045127 176 SGLF 179 (508)
Q Consensus 176 n~~~ 179 (508)
|+.+
T Consensus 301 N~~l 304 (313)
T d1ogqa_ 301 NKCL 304 (313)
T ss_dssp SSEE
T ss_pred Cccc
Confidence 9753
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.47 E-value=6.4e-14 Score=133.56 Aligned_cols=83 Identities=16% Similarity=0.108 Sum_probs=48.3
Q ss_pred cEEEcccCcccCCCChhhhccCCccccccccccccCcCCchhhhcCCccceeccccccccCccccccccccccCCCCccC
Q 045127 96 MSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLH 175 (508)
Q Consensus 96 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~~~ 175 (508)
+.|+|++|++++..+..|.++++|+++++++|++++..| ..|..+++|+.|++++|+++++++..+..+.+|..+++.+
T Consensus 156 ~~L~l~~N~l~~l~~~~f~~l~~L~~l~l~~N~l~~i~~-~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~l~~ 234 (284)
T d1ozna_ 156 THLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHP-HAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLND 234 (284)
T ss_dssp CEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECT-TTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCS
T ss_pred hhcccccCcccccchhhhccccccchhhhhhccccccCh-hHhhhhhhcccccccccccccccccccccccccCEEEecC
Confidence 555666665555555555556666666666666653333 5566666666666666666664444555556666666666
Q ss_pred CCCC
Q 045127 176 SGLF 179 (508)
Q Consensus 176 n~~~ 179 (508)
|++.
T Consensus 235 N~l~ 238 (284)
T d1ozna_ 235 NPWV 238 (284)
T ss_dssp SCEE
T ss_pred CCCC
Confidence 6653
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.46 E-value=6.3e-14 Score=133.63 Aligned_cols=176 Identities=14% Similarity=0.082 Sum_probs=129.9
Q ss_pred cccccccCCCCCCCCCCcCCcCCCC-CccccccCCCCCCcchhccccccc-cccccc-CCCCCcccCCCccccCCCCCcC
Q 045127 2 VVEDLNNLHPPPDFNSTIMNNCIHN-PSLKYCNSSSPMDLNEIFKSTIVA-SHLCNE-SKNPNCVESFPKIDLRSRPKIT 78 (508)
Q Consensus 2 ~~~~l~~l~~~~~~~~~~~~~c~~~-~~~~~~~~~~~~~l~~~~~~~~~~-~~l~~L-~~~~n~~~~~p~~~~~~l~~L~ 78 (508)
++..++.|+++.|-...+|..-+.. ..+.+++.. ...+.......... ..+..+ ....|.++.++...|+++++|+
T Consensus 30 ip~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls-~n~l~~i~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~l~~L~ 108 (284)
T d1ozna_ 30 IPAASQRIFLHGNRISHVPAASFRACRNLTILWLH-SNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLH 108 (284)
T ss_dssp CCTTCSEEECTTSCCCEECTTTTTTCTTCCEEECC-SSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCC
T ss_pred CCCCCCEEECcCCcCCCCCHHHhhccccccccccc-cccccccccccccccccccccccccccccccccchhhcccccCC
Confidence 4556788889998888887653332 223333311 11121111111100 111222 2345678888877999999999
Q ss_pred eEeCccCcccccCC------ccccEEEcccCcccCCCChhhhccCCccccccccccccCcCCchhhhcCCccceeccccc
Q 045127 79 PLYLSFNFFWKYCP------LGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYN 152 (508)
Q Consensus 79 ~L~L~~N~l~~~~p------~~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp~~~~~~l~~L~~l~l~~N 152 (508)
.|+|++|.+....+ ..++.+++++|+|++..+..|..+++|+.|+|++|+++ .+|+..|.++++|+.+++++|
T Consensus 109 ~L~l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~-~l~~~~f~~l~~L~~l~l~~N 187 (284)
T d1ozna_ 109 TLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRIS-SVPERAFRGLHSLDRLLLHQN 187 (284)
T ss_dssp EEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-EECTTTTTTCTTCCEEECCSS
T ss_pred EEecCCcccccccccccchhcccchhhhccccccccChhHhccccchhhcccccCccc-ccchhhhccccccchhhhhhc
Confidence 99999999876433 34589999999999877888999999999999999999 666689999999999999999
Q ss_pred cccCccccccccccccCCCCccCCCCC
Q 045127 153 HFSEMKVSDTKFFQRFNSSSFLHSGLF 179 (508)
Q Consensus 153 ~l~~~~~~~~~~l~~l~~~~~~~n~~~ 179 (508)
+++++.+..+..++++..+++.+|...
T Consensus 188 ~l~~i~~~~f~~l~~L~~L~l~~N~i~ 214 (284)
T d1ozna_ 188 RVAHVHPHAFRDLGRLMTLYLFANNLS 214 (284)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCS
T ss_pred cccccChhHhhhhhhcccccccccccc
Confidence 999977788888999999999998764
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=99.45 E-value=3.5e-14 Score=137.34 Aligned_cols=150 Identities=22% Similarity=0.285 Sum_probs=109.3
Q ss_pred CCCCCCcCCcCCCCCccccccCCCCCCcchhcccccccccccccCCCCCccc---CCCccccCCCCCcCeEeCcc-Cccc
Q 045127 13 PDFNSTIMNNCIHNPSLKYCNSSSPMDLNEIFKSTIVASHLCNESKNPNCVE---SFPKIDLRSRPKITPLYLSF-NFFW 88 (508)
Q Consensus 13 ~~~~~~~~~~c~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~L~~~~n~~~---~~p~~~~~~l~~L~~L~L~~-N~l~ 88 (508)
.+|... .+.|...+..+.|+..... .++..|++..|.+. .+|+ ++++|++|++|+|++ |+++
T Consensus 25 ~sW~~~-~d~C~~~w~gv~C~~~~~~------------~~v~~L~L~~~~l~g~~~lp~-~l~~L~~L~~L~Ls~~N~l~ 90 (313)
T d1ogqa_ 25 SSWLPT-TDCCNRTWLGVLCDTDTQT------------YRVNNLDLSGLNLPKPYPIPS-SLANLPYLNFLYIGGINNLV 90 (313)
T ss_dssp TTCCTT-SCTTTTCSTTEEECCSSSC------------CCEEEEEEECCCCSSCEECCG-GGGGCTTCSEEEEEEETTEE
T ss_pred CCCCCC-CCCCCCcCCCeEEeCCCCc------------EEEEEEECCCCCCCCCCCCCh-HHhcCccccccccccccccc
Confidence 568643 3556544559999843110 12222333333333 5787 899999999999986 8898
Q ss_pred ccCCccc------cEEEcccCcccCCCChhhhccCCccccccccccccCcCCchhhhcCCccceeccccccccCcccccc
Q 045127 89 KYCPLGI------MSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDT 162 (508)
Q Consensus 89 ~~~p~~l------~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~ 162 (508)
|.+|.+| ++|+|++|++++..|..+..+..|+.+++++|++.+.+| ..++.+++|+.+++++|.+++..+..+
T Consensus 91 g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~N~~~~~~p-~~l~~l~~L~~l~l~~n~l~~~ip~~~ 169 (313)
T d1ogqa_ 91 GPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLP-PSISSLPNLVGITFDGNRISGAIPDSY 169 (313)
T ss_dssp SCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCC-GGGGGCTTCCEEECCSSCCEEECCGGG
T ss_pred cccccccccccccchhhhccccccccccccccchhhhcccccccccccccCc-hhhccCcccceeecccccccccccccc
Confidence 8888654 899999999998888889999999999999999988888 788999999999999999998555556
Q ss_pred cccccc-CCCCccCCC
Q 045127 163 KFFQRF-NSSSFLHSG 177 (508)
Q Consensus 163 ~~l~~l-~~~~~~~n~ 177 (508)
..+..+ ..+.+.+|.
T Consensus 170 ~~l~~l~~~l~~~~n~ 185 (313)
T d1ogqa_ 170 GSFSKLFTSMTISRNR 185 (313)
T ss_dssp GCCCTTCCEEECCSSE
T ss_pred cccccccccccccccc
Confidence 555554 445555554
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.39 E-value=3.4e-13 Score=129.71 Aligned_cols=81 Identities=15% Similarity=0.174 Sum_probs=57.5
Q ss_pred cEEEcccCcccCCCChhhhccCCccccccccccccCcCCchhhhcCCccceeccccccccCccccccccccccCCCCccC
Q 045127 96 MSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLH 175 (508)
Q Consensus 96 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~~~ 175 (508)
+.|++++|.+++..+..|.+++.++.|++++|+++ .+++..|.++++|++|+|++|+|+. .++.+..+++|+.+++++
T Consensus 174 ~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s~n~l~-~~~~~~~~~l~~L~~L~L~~N~L~~-lp~~l~~l~~L~~L~Ls~ 251 (305)
T d1xkua_ 174 TELHLDGNKITKVDAASLKGLNNLAKLGLSFNSIS-AVDNGSLANTPHLRELHLNNNKLVK-VPGGLADHKYIQVVYLHN 251 (305)
T ss_dssp SEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCC-EECTTTGGGSTTCCEEECCSSCCSS-CCTTTTTCSSCCEEECCS
T ss_pred CEEECCCCcCCCCChhHhhcccccccccccccccc-ccccccccccccceeeecccccccc-cccccccccCCCEEECCC
Confidence 45666666666666666777777777777777777 4444777777888888888888877 556677777777777777
Q ss_pred CCC
Q 045127 176 SGL 178 (508)
Q Consensus 176 n~~ 178 (508)
|..
T Consensus 252 N~i 254 (305)
T d1xkua_ 252 NNI 254 (305)
T ss_dssp SCC
T ss_pred Ccc
Confidence 753
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.38 E-value=3.6e-13 Score=127.05 Aligned_cols=141 Identities=19% Similarity=0.215 Sum_probs=92.4
Q ss_pred ccccCCCCCCcchhcccccccccccccCCCCCcccCCCccccCCCCCcCeEeCccCcccccCC----ccccEEEcccCcc
Q 045127 30 KYCNSSSPMDLNEIFKSTIVASHLCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCP----LGIMSIDLSNNSL 105 (508)
Q Consensus 30 ~~~~~~~~~~l~~~~~~~~~~~~l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p----~~l~~L~Ls~N~l 105 (508)
+.|++.....+|..+. ..+..|.+..|.++.+|..+|.++++|+.|+|++|+|+...+ +.+++|+|++|++
T Consensus 15 v~C~~~~L~~iP~~lp-----~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~~l~~~~~l~~L~~L~Ls~N~l 89 (266)
T d1p9ag_ 15 VNCDKRNLTALPPDLP-----KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVDGTLPVLGTLDLSHNQL 89 (266)
T ss_dssp EECTTSCCSSCCSCCC-----TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECCSCCTTCCEEECCSSCC
T ss_pred EEccCCCCCeeCcCcC-----cCCCEEECcCCcCCCcCHHHhhccccccccccccccccccccccccccccccccccccc
Confidence 5687766666665442 234455666677888887678888888888888888874221 3458888888888
Q ss_pred cCCCChhhhccCCccccccccccccCcCCchhhhcCCccceeccccccccCccccccccccccCCCCccCCC
Q 045127 106 KGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLHSG 177 (508)
Q Consensus 106 ~~~~p~~~~~l~~L~~L~l~~N~l~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~~~n~ 177 (508)
+ ..+..+.++++|+.|++++|++. .++...+..+.+++.|++++|.++++++..+..++++..+++.+|.
T Consensus 90 ~-~~~~~~~~l~~L~~L~l~~~~~~-~~~~~~~~~l~~l~~L~l~~n~l~~l~~~~~~~l~~l~~l~l~~N~ 159 (266)
T d1p9ag_ 90 Q-SLPLLGQTLPALTVLDVSFNRLT-SLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNN 159 (266)
T ss_dssp S-SCCCCTTTCTTCCEEECCSSCCC-CCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSC
T ss_pred c-ccccccccccccccccccccccc-eeeccccccccccccccccccccceeccccccccccchhccccccc
Confidence 7 44667777777877777777776 4443555556666666666666665434444445555555555554
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.34 E-value=7.1e-13 Score=109.57 Aligned_cols=95 Identities=22% Similarity=0.219 Sum_probs=66.1
Q ss_pred cCCCCCcccCCCccccCCCCCcCeEeCccCcccccCCcc------ccEEEcccCcccCCCChhhhccCCccccccccccc
Q 045127 56 ESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCPLG------IMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQL 129 (508)
Q Consensus 56 L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~------l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l 129 (508)
|+...|.++.++. +.++++|++|+|++|+|+. +|+. ++.|++++|+|++ +| .+..+++|+.|++++|+|
T Consensus 3 L~Ls~n~l~~l~~--l~~l~~L~~L~ls~N~l~~-lp~~~~~l~~L~~L~l~~N~i~~-l~-~~~~l~~L~~L~l~~N~i 77 (124)
T d1dcea3 3 LHLAHKDLTVLCH--LEQLLLVTHLDLSHNRLRA-LPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRL 77 (124)
T ss_dssp EECTTSCCSSCCC--GGGGTTCCEEECCSSCCCC-CCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCC
T ss_pred EEcCCCCCCCCcc--cccCCCCCEEECCCCccCc-chhhhhhhhcccccccccccccc-cC-ccccccccCeEECCCCcc
Confidence 3444566777763 7778888888888888865 4533 3777777777773 44 477777778888888777
Q ss_pred cCcCCc-hhhhcCCccceeccccccccC
Q 045127 130 SGDIPV-ESFSVLANLTFLNLSYNHFSE 156 (508)
Q Consensus 130 ~g~lp~-~~~~~l~~L~~l~l~~N~l~~ 156 (508)
+ .+|. ..+..+++|+.|++++|+++.
T Consensus 78 ~-~~~~~~~l~~~~~L~~L~l~~N~i~~ 104 (124)
T d1dcea3 78 Q-QSAAIQPLVSCPRLVLLNLQGNSLCQ 104 (124)
T ss_dssp C-SSSTTGGGGGCTTCCEEECTTSGGGG
T ss_pred C-CCCCchhhcCCCCCCEEECCCCcCCc
Confidence 7 5542 356777777777777777765
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.34 E-value=9.7e-13 Score=108.75 Aligned_cols=96 Identities=22% Similarity=0.201 Sum_probs=83.3
Q ss_pred CeEeCccCcccccCC-----ccccEEEcccCcccCCCChhhhccCCccccccccccccCcCCchhhhcCCccceeccccc
Q 045127 78 TPLYLSFNFFWKYCP-----LGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYN 152 (508)
Q Consensus 78 ~~L~L~~N~l~~~~p-----~~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp~~~~~~l~~L~~l~l~~N 152 (508)
+.|+|++|+|+. +| ..+++|+|++|+|+ .+|..|+.+++|+.|++++|+|+ .+| .++.+++|+.|++++|
T Consensus 1 R~L~Ls~n~l~~-l~~l~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~-~l~--~~~~l~~L~~L~l~~N 75 (124)
T d1dcea3 1 RVLHLAHKDLTV-LCHLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALE-NVD--GVANLPRLQELLLCNN 75 (124)
T ss_dssp SEEECTTSCCSS-CCCGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCG--GGTTCSSCCEEECCSS
T ss_pred CEEEcCCCCCCC-CcccccCCCCCEEECCCCccC-cchhhhhhhhccccccccccccc-ccC--ccccccccCeEECCCC
Confidence 579999999985 34 34599999999999 67889999999999999999999 787 3899999999999999
Q ss_pred cccCccc-cccccccccCCCCccCCCC
Q 045127 153 HFSEMKV-SDTKFFQRFNSSSFLHSGL 178 (508)
Q Consensus 153 ~l~~~~~-~~~~~l~~l~~~~~~~n~~ 178 (508)
+++.++. ..+..++++..+++.+|+.
T Consensus 76 ~i~~~~~~~~l~~~~~L~~L~l~~N~i 102 (124)
T d1dcea3 76 RLQQSAAIQPLVSCPRLVLLNLQGNSL 102 (124)
T ss_dssp CCCSSSTTGGGGGCTTCCEEECTTSGG
T ss_pred ccCCCCCchhhcCCCCCCEEECCCCcC
Confidence 9998432 4567788999999999975
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.32 E-value=7.9e-13 Score=114.75 Aligned_cols=101 Identities=15% Similarity=0.068 Sum_probs=56.7
Q ss_pred cccCCCCCcccCCCccccCCCCCcCeEeCccCcccccC--C--ccccEEEcccCcccCCCChhhhccCCccccccccccc
Q 045127 54 CNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYC--P--LGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQL 129 (508)
Q Consensus 54 ~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~--p--~~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l 129 (508)
..|++..|.++.|+. .+..+++|+.|+|++|+|+..- + +.+++|+|++|+++...+..+..+++|+.|+|++|+|
T Consensus 21 r~L~L~~n~I~~i~~-~~~~l~~L~~L~Ls~N~i~~l~~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L~~L~L~~N~i 99 (162)
T d1a9na_ 21 RELDLRGYKIPVIEN-LGATLDQFDAIDFSDNEIRKLDGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSL 99 (162)
T ss_dssp EEEECTTSCCCSCCC-GGGGTTCCSEEECCSSCCCEECCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSCCC
T ss_pred cEEECCCCCCCccCc-cccccccCCEEECCCCCCCccCCcccCcchhhhhcccccccCCCccccccccccccceeccccc
Confidence 344455556666654 4555666666666666665321 1 2346666666666644444455566666666666666
Q ss_pred cCcCCc-hhhhcCCccceeccccccccC
Q 045127 130 SGDIPV-ESFSVLANLTFLNLSYNHFSE 156 (508)
Q Consensus 130 ~g~lp~-~~~~~l~~L~~l~l~~N~l~~ 156 (508)
+ .++. ..+..+++|+.|++++|+++.
T Consensus 100 ~-~~~~l~~l~~l~~L~~L~l~~N~i~~ 126 (162)
T d1a9na_ 100 V-ELGDLDPLASLKSLTYLCILRNPVTN 126 (162)
T ss_dssp C-CGGGGGGGGGCTTCCEEECCSSGGGG
T ss_pred c-ccccccccccccccchhhcCCCcccc
Confidence 5 4442 245556666666666666654
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.29 E-value=5.7e-13 Score=115.69 Aligned_cols=112 Identities=17% Similarity=0.147 Sum_probs=92.8
Q ss_pred CcccCCCccccCCCCCcCeEeCccCcccccCC------ccccEEEcccCcccCCCChhhhccCCccccccccccccCcCC
Q 045127 61 NCVESFPKIDLRSRPKITPLYLSFNFFWKYCP------LGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIP 134 (508)
Q Consensus 61 n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p------~~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp 134 (508)
+.+...|. |.++.+|+.|+|++|+|+.. | ..++.|+|++|+|+. ++ .|..+++|++|++++|+++ .+|
T Consensus 6 ~~i~~~~~--~~n~~~lr~L~L~~n~I~~i-~~~~~~l~~L~~L~Ls~N~i~~-l~-~~~~l~~L~~L~ls~N~i~-~l~ 79 (162)
T d1a9na_ 6 ELIEQAAQ--YTNAVRDRELDLRGYKIPVI-ENLGATLDQFDAIDFSDNEIRK-LD-GFPLLRRLKTLLVNNNRIC-RIG 79 (162)
T ss_dssp HHHHTSCE--EECTTSCEEEECTTSCCCSC-CCGGGGTTCCSEEECCSSCCCE-EC-CCCCCSSCCEEECCSSCCC-EEC
T ss_pred HHHhhhHh--ccCcCcCcEEECCCCCCCcc-CccccccccCCEEECCCCCCCc-cC-CcccCcchhhhhccccccc-CCC
Confidence 34455554 77888999999999999863 3 345999999999994 44 5899999999999999999 777
Q ss_pred chhhhcCCccceeccccccccCcc-ccccccccccCCCCccCCCC
Q 045127 135 VESFSVLANLTFLNLSYNHFSEMK-VSDTKFFQRFNSSSFLHSGL 178 (508)
Q Consensus 135 ~~~~~~l~~L~~l~l~~N~l~~~~-~~~~~~l~~l~~~~~~~n~~ 178 (508)
+..+..+++|+.|++++|+++.+. ...+..+++|+.+++.+|+.
T Consensus 80 ~~~~~~l~~L~~L~L~~N~i~~~~~l~~l~~l~~L~~L~l~~N~i 124 (162)
T d1a9na_ 80 EGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILRNPV 124 (162)
T ss_dssp SCHHHHCTTCCEEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGG
T ss_pred ccccccccccccceeccccccccccccccccccccchhhcCCCcc
Confidence 577788999999999999999842 24567788999999999975
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.25 E-value=1.5e-11 Score=118.01 Aligned_cols=119 Identities=18% Similarity=0.197 Sum_probs=96.8
Q ss_pred cCCCCCcccCCCccccCCCCCcCeEeCccCcccccCCccc------cEEEcccCcccCCCChhhhccCCccccccccccc
Q 045127 56 ESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCPLGI------MSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQL 129 (508)
Q Consensus 56 L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~l------~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l 129 (508)
+....|.+..+|. . .+++|+.|++++|.+++..|..+ +.|++++|.+++..+..|.++++|++|+|++|+|
T Consensus 155 l~l~~n~l~~l~~-~--~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~L~~N~L 231 (305)
T d1xkua_ 155 IRIADTNITTIPQ-G--LPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKL 231 (305)
T ss_dssp EECCSSCCCSCCS-S--CCTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCC
T ss_pred cccccCCccccCc-c--cCCccCEEECCCCcCCCCChhHhhccccccccccccccccccccccccccccceeeecccccc
Confidence 3444566777775 3 25788899999998887766443 8999999999998899999999999999999999
Q ss_pred cCcCCchhhhcCCccceeccccccccCcccccc------ccccccCCCCccCCCCC
Q 045127 130 SGDIPVESFSVLANLTFLNLSYNHFSEMKVSDT------KFFQRFNSSSFLHSGLF 179 (508)
Q Consensus 130 ~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~------~~l~~l~~~~~~~n~~~ 179 (508)
+ .+| ..|..+++|+.|+|++|+|+.+....+ ....++..+++.+|++-
T Consensus 232 ~-~lp-~~l~~l~~L~~L~Ls~N~i~~i~~~~f~~~~~~~~~~~L~~L~L~~N~~~ 285 (305)
T d1xkua_ 232 V-KVP-GGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQ 285 (305)
T ss_dssp S-SCC-TTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSC
T ss_pred c-ccc-cccccccCCCEEECCCCccCccChhhccCcchhcccCCCCEEECCCCcCc
Confidence 9 899 789999999999999999998543333 23466778889999863
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Probab=99.20 E-value=2e-11 Score=120.56 Aligned_cols=115 Identities=22% Similarity=0.267 Sum_probs=79.4
Q ss_pred ccccCCCCCcccCCCccccCCCCCcCeEeCccCcccccCC--------------------------ccccEEEcccCccc
Q 045127 53 LCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCP--------------------------LGIMSIDLSNNSLK 106 (508)
Q Consensus 53 l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p--------------------------~~l~~L~Ls~N~l~ 106 (508)
+..|....|.+..+++ ++.+++|+.|++++|++++..| ..++.|+|++|+++
T Consensus 243 L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~~~l~~~~~~~~~~~l~~l~~~~n~l~~~~~~~~~~~l~~L~ls~n~l~ 320 (384)
T d2omza2 243 LTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNIS 320 (384)
T ss_dssp CSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGGGTTCTTCSEEECCSSCCSCCGGGGGCTTCSEEECCSSCCS
T ss_pred cchhccccCccCCCCc--ccccccCCEeeccCcccCCCCccccccccccccccccccccccccchhcccCeEECCCCCCC
Confidence 4445555566666654 6777777777777777664321 22377888888887
Q ss_pred CCCChhhhccCCccccccccccccCcCCchhhhcCCccceeccccccccCccccccccccccCCCCccCC
Q 045127 107 GAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLHS 176 (508)
Q Consensus 107 ~~~p~~~~~l~~L~~L~l~~N~l~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~~~n 176 (508)
+. + .+..+++|+.|+|++|+|+ .+| .+.++++|++|++++|+|++ .+| +..+++|+.+++++|
T Consensus 321 ~l-~-~l~~l~~L~~L~L~~n~l~-~l~--~l~~l~~L~~L~l~~N~l~~-l~~-l~~l~~L~~L~L~~N 383 (384)
T d2omza2 321 DI-S-PVSSLTKLQRLFFANNKVS-DVS--SLANLTNINWLSAGHNQISD-LTP-LANLTRITQLGLNDQ 383 (384)
T ss_dssp CC-G-GGGGCTTCCEEECCSSCCC-CCG--GGGGCTTCCEEECCSSCCCB-CGG-GTTCTTCSEEECCCE
T ss_pred CC-c-ccccCCCCCEEECCCCCCC-CCh--hHcCCCCCCEEECCCCcCCC-Chh-hccCCCCCEeeCCCC
Confidence 54 2 3777888888888888887 565 47778888888888888887 443 666777777777766
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.17 E-value=1.8e-11 Score=113.20 Aligned_cols=62 Identities=10% Similarity=0.058 Sum_probs=39.3
Q ss_pred CCCCCccccccCCCCCCcchhcccccccccccccCCCCCcccCCCccccCCCCCcCeEeCccCcccc
Q 045127 23 CIHNPSLKYCNSSSPMDLNEIFKSTIVASHLCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWK 89 (508)
Q Consensus 23 c~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~ 89 (508)
|.|......|.......+|..... .+..|....|.++++|...|.++++|++|+|++|.+..
T Consensus 6 C~C~~~~i~c~~~~l~~iP~~l~~-----~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~ 67 (242)
T d1xwdc1 6 CHCSNRVFLCQESKVTEIPSDLPR-----NAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLE 67 (242)
T ss_dssp EEECSSEEEEESCSCSSCCSCSCS-----CCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCC
T ss_pred CCCcCCEEEEeCCCCCCcCCCCCC-----CCCEEECcCCcCCccChhHhhccchhhhhhhccccccc
Confidence 555555777776655566654322 33344455567777777667778888888888877653
|
| >d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: High affinity nerve growth factor receptor, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.16 E-value=2.4e-11 Score=104.41 Aligned_cols=92 Identities=18% Similarity=0.212 Sum_probs=45.3
Q ss_pred CcccCCCccccCCCCCcCeEeCccCc-ccccCCc------cccEEEcccCcccCCCChhhhccCCccccccccccccCcC
Q 045127 61 NCVESFPKIDLRSRPKITPLYLSFNF-FWKYCPL------GIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDI 133 (508)
Q Consensus 61 n~~~~~p~~~~~~l~~L~~L~L~~N~-l~~~~p~------~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~l 133 (508)
+.+.++|. .+..+++|+.|+|++|+ |+...+. .|+.|+|++|+|+.+.|.+|..+++|++|+|++|+|+ .+
T Consensus 18 ~~~~~~p~-~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N~l~-~l 95 (156)
T d2ifga3 18 DGALDSLH-HLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALE-SL 95 (156)
T ss_dssp SCCCTTTT-TSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCS-CC
T ss_pred CCCccCcc-cccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccceeccCCCCc-cc
Confidence 34455665 66777777777776553 5432211 1234444444444344444555555555555555555 44
Q ss_pred CchhhhcCCccceecccccccc
Q 045127 134 PVESFSVLANLTFLNLSYNHFS 155 (508)
Q Consensus 134 p~~~~~~l~~L~~l~l~~N~l~ 155 (508)
|.+.|..+ +|+.|+|++|.|.
T Consensus 96 ~~~~~~~~-~l~~L~L~~Np~~ 116 (156)
T d2ifga3 96 SWKTVQGL-SLQELVLSGNPLH 116 (156)
T ss_dssp CSTTTCSC-CCCEEECCSSCCC
T ss_pred Chhhhccc-cccccccCCCccc
Confidence 43333322 3455555555443
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.15 E-value=5.4e-11 Score=107.62 Aligned_cols=113 Identities=25% Similarity=0.225 Sum_probs=60.8
Q ss_pred ccccCCCCCcccCCCccccCCCCCcCeEeCccCcccccCC----ccccEEEcccCcccCCCChhhhccCCcccccccccc
Q 045127 53 LCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCP----LGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQ 128 (508)
Q Consensus 53 l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p----~~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~ 128 (508)
|..|....|.++.+|. +..+++|+.|++++|.+....+ ..++.+++++|.+++ +..+..+++|+++++++|+
T Consensus 92 L~~L~l~~n~i~~l~~--l~~l~~L~~L~l~~~~~~~~~~l~~l~~l~~l~~~~n~l~~--~~~~~~l~~L~~l~l~~n~ 167 (210)
T d1h6ta2 92 LGWLFLDENKVKDLSS--LKDLKKLKSLSLEHNGISDINGLVHLPQLESLYLGNNKITD--ITVLSRLTKLDTLSLEDNQ 167 (210)
T ss_dssp CCEEECCSSCCCCGGG--GTTCTTCCEEECTTSCCCCCGGGGGCTTCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSC
T ss_pred cccccccccccccccc--ccccccccccccccccccccccccccccccccccccccccc--ccccccccccccccccccc
Confidence 3334444455555542 5555566666666555543110 233566666666653 2345566666666666666
Q ss_pred ccCcCCchhhhcCCccceeccccccccCccccccccccccCCCCcc
Q 045127 129 LSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFL 174 (508)
Q Consensus 129 l~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~~ 174 (508)
++ .++ . +.++++|+.|++++|+++. . +.+..+++|+.+++.
T Consensus 168 l~-~i~-~-l~~l~~L~~L~Ls~N~i~~-l-~~l~~l~~L~~L~Ls 208 (210)
T d1h6ta2 168 IS-DIV-P-LAGLTKLQNLYLSKNHISD-L-RALAGLKNLDVLELF 208 (210)
T ss_dssp CC-CCG-G-GTTCTTCCEEECCSSCCCB-C-GGGTTCTTCSEEEEE
T ss_pred cc-ccc-c-ccCCCCCCEEECCCCCCCC-C-hhhcCCCCCCEEEcc
Confidence 66 444 2 5566666666666666665 2 234555555555543
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.11 E-value=1.6e-10 Score=103.56 Aligned_cols=118 Identities=20% Similarity=0.249 Sum_probs=79.4
Q ss_pred cccccCCCCCcccCCCccccCCCCCcCeEeCccCcccccCC----ccccEEEcccCcccCCCChhhhccCCccccccccc
Q 045127 52 HLCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCP----LGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYN 127 (508)
Q Consensus 52 ~l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p----~~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N 127 (508)
+|..|+...|.++.+++ ++++++|+.|++++|.+....+ ..++.|++++|.+... ..+..+++|+.|++++|
T Consensus 63 nL~~L~Ls~N~l~~~~~--l~~l~~L~~L~l~~n~~~~~~~l~~l~~L~~L~l~~~~~~~~--~~~~~l~~L~~L~l~~n 138 (199)
T d2omxa2 63 NLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSN 138 (199)
T ss_dssp TCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGGGTTCTTCSEEECCSSCCCCC--GGGTTCTTCSEEECCSS
T ss_pred CcCcCccccccccCccc--ccCCcccccccccccccccccccccccccccccccccccccc--cccchhhhhHHhhhhhh
Confidence 44455556667777764 7777888888888877764221 3457777777777642 34667777777777777
Q ss_pred cccCcCCchhhhcCCccceeccccccccCccccccccccccCCCCccCCCC
Q 045127 128 QLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLHSGL 178 (508)
Q Consensus 128 ~l~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~~~n~~ 178 (508)
++. .+| .+..+++|+.|++++|++++ .+ .+..+++|+.+++.+|+.
T Consensus 139 ~l~-~~~--~l~~~~~L~~L~l~~n~l~~-l~-~l~~l~~L~~L~ls~N~i 184 (199)
T d2omxa2 139 TIS-DIS--ALSGLTSLQQLNFSSNQVTD-LK-PLANLTTLERLDISSNKV 184 (199)
T ss_dssp CCC-CCG--GGTTCTTCSEEECCSSCCCC-CG-GGTTCTTCCEEECCSSCC
T ss_pred hhc-ccc--cccccccccccccccccccC-Cc-cccCCCCCCEEECCCCCC
Confidence 777 555 36677777777777777776 32 356677777777777753
|
| >d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: Outer arm dynein light chain 1 family: Outer arm dynein light chain 1 domain: Outer arm dynein light chain 1 species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=99.11 E-value=1.8e-12 Score=116.44 Aligned_cols=111 Identities=20% Similarity=0.228 Sum_probs=88.6
Q ss_pred cccCCCccccCCCCCcCeEeCccCcccccCC-----ccccEEEcccCcccCCCChhhhccCCccccccccccccCcCCch
Q 045127 62 CVESFPKIDLRSRPKITPLYLSFNFFWKYCP-----LGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVE 136 (508)
Q Consensus 62 ~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p-----~~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp~~ 136 (508)
.+..+|. +++.|++|++|+|++|+|+. ++ ..+++|+|++|+|+ .+|..+..+++|+.|++++|+++ .++
T Consensus 36 ~i~~l~~-sl~~L~~L~~L~Ls~n~I~~-i~~l~~l~~L~~L~Ls~N~i~-~i~~~~~~~~~L~~L~l~~N~i~-~l~-- 109 (198)
T d1m9la_ 36 PIEKMDA-TLSTLKACKHLALSTNNIEK-ISSLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIA-SLS-- 109 (198)
T ss_dssp TCCCCHH-HHHHTTTCCEEECSEEEESC-CCCHHHHTTCCEEECCEEEEC-SCSSHHHHHHHCCEEECSEEECC-CHH--
T ss_pred chhhhhh-HHhcccccceeECcccCCCC-cccccCCccccChhhcccccc-ccccccccccccccccccccccc-ccc--
Confidence 4566666 78889999999999999875 34 35689999999998 56766777788999999999998 665
Q ss_pred hhhcCCccceeccccccccCcc-ccccccccccCCCCccCCCC
Q 045127 137 SFSVLANLTFLNLSYNHFSEMK-VSDTKFFQRFNSSSFLHSGL 178 (508)
Q Consensus 137 ~~~~l~~L~~l~l~~N~l~~~~-~~~~~~l~~l~~~~~~~n~~ 178 (508)
.+..+++|+.|++++|+++.+. ...+..+++|..+++.+|+.
T Consensus 110 ~~~~l~~L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~L~~N~l 152 (198)
T d1m9la_ 110 GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPL 152 (198)
T ss_dssp HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSSHH
T ss_pred cccccccccccccccchhccccccccccCCCccceeecCCCcc
Confidence 4778899999999999998732 24567788888999998864
|
| >d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: High affinity nerve growth factor receptor, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.10 E-value=5.7e-11 Score=102.06 Aligned_cols=109 Identities=14% Similarity=0.095 Sum_probs=87.1
Q ss_pred CCCCCcCeEeCccCccccc---CC--ccccEEEcccC-cccCCCChhhhccCCccccccccccccCcCCchhhhcCCccc
Q 045127 72 RSRPKITPLYLSFNFFWKY---CP--LGIMSIDLSNN-SLKGAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLT 145 (508)
Q Consensus 72 ~~l~~L~~L~L~~N~l~~~---~p--~~l~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~l~~N~l~g~lp~~~~~~l~~L~ 145 (508)
......+.++.+++.+... +| ..++.|+|++| .|+...+.+|.++++|+.|+|++|+|+ .|++.+|..+++|+
T Consensus 5 C~c~~~~~l~c~~~~~~~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~-~i~~~~f~~l~~L~ 83 (156)
T d2ifga3 5 CCPHGSSGLRCTRDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLR-FVAPDAFHFTPRLS 83 (156)
T ss_dssp SCCSSSSCEECCSSCCCTTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCC-EECTTGGGSCSCCC
T ss_pred CCcCCCCeEEecCCCCccCcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccC-Cccccccccccccc
Confidence 3445566788898888652 22 35599999766 599777788999999999999999999 77768999999999
Q ss_pred eeccccccccCccccccccccccCCCCccCCCCC-CCC
Q 045127 146 FLNLSYNHFSEMKVSDTKFFQRFNSSSFLHSGLF-PGH 182 (508)
Q Consensus 146 ~l~l~~N~l~~~~~~~~~~l~~l~~~~~~~n~~~-~c~ 182 (508)
.|+|++|+|+.++...+. ..++..+++.+|++- .|.
T Consensus 84 ~L~Ls~N~l~~l~~~~~~-~~~l~~L~L~~Np~~C~C~ 120 (156)
T d2ifga3 84 RLNLSFNALESLSWKTVQ-GLSLQELVLSGNPLHCSCA 120 (156)
T ss_dssp EEECCSSCCSCCCSTTTC-SCCCCEEECCSSCCCCCGG
T ss_pred ceeccCCCCcccChhhhc-cccccccccCCCcccCCch
Confidence 999999999994444444 447889999999984 443
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.09 E-value=1.4e-10 Score=103.78 Aligned_cols=108 Identities=24% Similarity=0.279 Sum_probs=64.4
Q ss_pred ccccCCCCCcccCCCccccCCCCCcCeEeCccCcccccCC----ccccEEEcccCcccCCCChhhhccCCcccccccccc
Q 045127 53 LCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCP----LGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQ 128 (508)
Q Consensus 53 l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p----~~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~ 128 (508)
|..|....|.+..++. ++++++|+.|++++|.+....+ ..++.|++++|++.. +| .+..+++|+.|++++|+
T Consensus 86 L~~L~l~~n~~~~~~~--l~~l~~L~~L~l~~~~~~~~~~~~~l~~L~~L~l~~n~l~~-~~-~l~~~~~L~~L~l~~n~ 161 (199)
T d2omxa2 86 LVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISD-IS-ALSGLTSLQQLNFSSNQ 161 (199)
T ss_dssp CCEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGGGTTCTTCSEEECCSSCCCC-CG-GGTTCTTCSEEECCSSC
T ss_pred cccccccccccccccc--cccccccccccccccccccccccchhhhhHHhhhhhhhhcc-cc-ccccccccccccccccc
Confidence 4445555566666653 6666777777777666654322 344677777776652 22 46666777777777777
Q ss_pred ccCcCCchhhhcCCccceeccccccccCccccccccccccC
Q 045127 129 LSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFN 169 (508)
Q Consensus 129 l~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~ 169 (508)
++ .++ .++++++|+.|++++|+++. . +.+..+++|+
T Consensus 162 l~-~l~--~l~~l~~L~~L~ls~N~i~~-i-~~l~~L~~L~ 197 (199)
T d2omxa2 162 VT-DLK--PLANLTTLERLDISSNKVSD-I-SVLAKLTNLE 197 (199)
T ss_dssp CC-CCG--GGTTCTTCCEEECCSSCCCC-C-GGGGGCTTCS
T ss_pred cc-CCc--cccCCCCCCEEECCCCCCCC-C-ccccCCCCCC
Confidence 76 454 25666777777777777665 2 2344444443
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Probab=99.03 E-value=3.1e-10 Score=103.70 Aligned_cols=112 Identities=15% Similarity=0.184 Sum_probs=65.3
Q ss_pred ccccCCCCCcccCCCccccCCCCCcCeEeCccCcccccCC----c----------------------cccEEEcccCccc
Q 045127 53 LCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCP----L----------------------GIMSIDLSNNSLK 106 (508)
Q Consensus 53 l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p----~----------------------~l~~L~Ls~N~l~ 106 (508)
+..|....|.++.++ .+..+++|+.|++++|...+..+ . .++.|++++|.++
T Consensus 87 l~~l~~~~n~~~~i~--~l~~l~~L~~l~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~ 164 (227)
T d1h6ua2 87 ITELELSGNPLKNVS--AIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDLNQITNISPLAGLTNLQYLSIGNAQVS 164 (227)
T ss_dssp CCEEECCSCCCSCCG--GGTTCTTCCEEECTTSCCCCCGGGTTCTTCCEEECCSSCCCCCGGGGGCTTCCEEECCSSCCC
T ss_pred ccccccccccccccc--cccccccccccccccccccccchhccccchhhhhchhhhhchhhhhccccccccccccccccc
Confidence 344555566777776 47888888888888888664322 1 2255666666655
Q ss_pred CCCChhhhccCCccccccccccccCcCCchhhhcCCccceeccccccccCccccccccccccCCCCc
Q 045127 107 GAFPIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSF 173 (508)
Q Consensus 107 ~~~p~~~~~l~~L~~L~l~~N~l~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~ 173 (508)
+. ..++++++|+.|+|++|+++ .+| .++.+++|+.|++++|++++ .++ +..+++|..+++
T Consensus 165 ~~--~~l~~l~~L~~L~Ls~n~l~-~l~--~l~~l~~L~~L~Ls~N~lt~-i~~-l~~l~~L~~L~l 224 (227)
T d1h6ua2 165 DL--TPLANLSKLTTLKADDNKIS-DIS--PLASLPNLIEVHLKNNQISD-VSP-LANTSNLFIVTL 224 (227)
T ss_dssp CC--GGGTTCTTCCEEECCSSCCC-CCG--GGGGCTTCCEEECTTSCCCB-CGG-GTTCTTCCEEEE
T ss_pred cc--hhhcccccceecccCCCccC-CCh--hhcCCCCCCEEECcCCcCCC-Ccc-cccCCCCCEEEe
Confidence 32 23556666666666666665 444 25556666666666666665 222 444555554444
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.01 E-value=5.8e-10 Score=100.63 Aligned_cols=117 Identities=20% Similarity=0.225 Sum_probs=78.8
Q ss_pred cccccCCCCCcccCCCccccCCCCCcCeEeCccCcccccCC-----ccccEEEcccCcccCCCChhhhccCCcccccccc
Q 045127 52 HLCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCP-----LGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSY 126 (508)
Q Consensus 52 ~l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p-----~~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~ 126 (508)
.|..|....|.++.+++ ++.+++|+.|++++|+|++ +| +.++.|++++|.+.. + ..+..+++|+.+++++
T Consensus 69 ~L~~L~L~~n~i~~l~~--~~~l~~L~~L~l~~n~i~~-l~~l~~l~~L~~L~l~~~~~~~-~-~~l~~l~~l~~l~~~~ 143 (210)
T d1h6ta2 69 NVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LSSLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGN 143 (210)
T ss_dssp TCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GGGGTTCTTCCEEECTTSCCCC-C-GGGGGCTTCCEEECCS
T ss_pred CCCEEeCCCccccCccc--cccCccccccccccccccc-cccccccccccccccccccccc-c-cccccccccccccccc
Confidence 34455555566766664 6677777777777777765 22 345777777777652 2 3567777777777777
Q ss_pred ccccCcCCchhhhcCCccceeccccccccCccccccccccccCCCCccCCCC
Q 045127 127 NQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLHSGL 178 (508)
Q Consensus 127 N~l~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~~~n~~ 178 (508)
|+++ .++ .+..+++|+.+++++|++++ .+ .+..+++|+.+++.+|..
T Consensus 144 n~l~-~~~--~~~~l~~L~~l~l~~n~l~~-i~-~l~~l~~L~~L~Ls~N~i 190 (210)
T d1h6ta2 144 NKIT-DIT--VLSRLTKLDTLSLEDNQISD-IV-PLAGLTKLQNLYLSKNHI 190 (210)
T ss_dssp SCCC-CCG--GGGGCTTCSEEECCSSCCCC-CG-GGTTCTTCCEEECCSSCC
T ss_pred cccc-ccc--cccccccccccccccccccc-cc-cccCCCCCCEEECCCCCC
Confidence 7777 333 35677888888888888887 33 366777888888887754
|
| >d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: Outer arm dynein light chain 1 family: Outer arm dynein light chain 1 domain: Outer arm dynein light chain 1 species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=98.97 E-value=9.9e-12 Score=111.45 Aligned_cols=99 Identities=17% Similarity=0.164 Sum_probs=83.6
Q ss_pred cccccCCCCCcccCCCccccCCCCCcCeEeCccCcccccCC------ccccEEEcccCcccCCCChhhhccCCccccccc
Q 045127 52 HLCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCP------LGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLS 125 (508)
Q Consensus 52 ~l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p------~~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 125 (508)
.+..|+...|.++.++ .|.++++|+.|+|++|+|+. +| +.+++|++++|+++. + ..+..+++|++|+|+
T Consensus 49 ~L~~L~Ls~n~I~~i~--~l~~l~~L~~L~Ls~N~i~~-i~~~~~~~~~L~~L~l~~N~i~~-l-~~~~~l~~L~~L~L~ 123 (198)
T d1m9la_ 49 ACKHLALSTNNIEKIS--SLSGMENLRILSLGRNLIKK-IENLDAVADTLEELWISYNQIAS-L-SGIEKLVNLRVLYMS 123 (198)
T ss_dssp TCCEEECSEEEESCCC--CHHHHTTCCEEECCEEEECS-CSSHHHHHHHCCEEECSEEECCC-H-HHHHHHHHSSEEEES
T ss_pred ccceeECcccCCCCcc--cccCCccccChhhccccccc-ccccccccccccccccccccccc-c-ccccccccccccccc
Confidence 4555666778899996 49999999999999999975 44 346999999999995 3 468999999999999
Q ss_pred cccccCcCCc-hhhhcCCccceeccccccccC
Q 045127 126 YNQLSGDIPV-ESFSVLANLTFLNLSYNHFSE 156 (508)
Q Consensus 126 ~N~l~g~lp~-~~~~~l~~L~~l~l~~N~l~~ 156 (508)
+|+++ .++. ..+..+++|+.|++++|+++.
T Consensus 124 ~N~i~-~~~~~~~l~~l~~L~~L~L~~N~l~~ 154 (198)
T d1m9la_ 124 NNKIT-NWGEIDKLAALDKLEDLLLAGNPLYN 154 (198)
T ss_dssp EEECC-CHHHHHHHTTTTTCSEEEECSSHHHH
T ss_pred cchhc-cccccccccCCCccceeecCCCcccc
Confidence 99999 6652 368899999999999999987
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Probab=98.93 E-value=9.3e-10 Score=108.21 Aligned_cols=92 Identities=25% Similarity=0.285 Sum_probs=76.1
Q ss_pred cccCCCCCcccCCCccccCCCCCcCeEeCccCcccccCC----ccccEEEcccCcccCCCChhhhccCCccccccccccc
Q 045127 54 CNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCP----LGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQL 129 (508)
Q Consensus 54 ~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p----~~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l 129 (508)
..+..+.|.+..++ .+..+++++.|+|++|++++..| +.++.|+|++|+|++ ++ .|+++++|++|+|++|+|
T Consensus 288 ~~l~~~~n~l~~~~--~~~~~~~l~~L~ls~n~l~~l~~l~~l~~L~~L~L~~n~l~~-l~-~l~~l~~L~~L~l~~N~l 363 (384)
T d2omza2 288 TNLELNENQLEDIS--PISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFANNKVSD-VS-SLANLTNINWLSAGHNQI 363 (384)
T ss_dssp SEEECCSSCCSCCG--GGGGCTTCSEEECCSSCCSCCGGGGGCTTCCEEECCSSCCCC-CG-GGGGCTTCCEEECCSSCC
T ss_pred cccccccccccccc--ccchhcccCeEECCCCCCCCCcccccCCCCCEEECCCCCCCC-Ch-hHcCCCCCCEEECCCCcC
Confidence 34445556676665 48889999999999999987543 356999999999984 44 699999999999999999
Q ss_pred cCcCCchhhhcCCccceeccccc
Q 045127 130 SGDIPVESFSVLANLTFLNLSYN 152 (508)
Q Consensus 130 ~g~lp~~~~~~l~~L~~l~l~~N 152 (508)
+ .+| . +.++++|+.|++++|
T Consensus 364 ~-~l~-~-l~~l~~L~~L~L~~N 383 (384)
T d2omza2 364 S-DLT-P-LANLTRITQLGLNDQ 383 (384)
T ss_dssp C-BCG-G-GTTCTTCSEEECCCE
T ss_pred C-CCh-h-hccCCCCCEeeCCCC
Confidence 9 555 2 889999999999998
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Probab=98.91 E-value=1.5e-09 Score=99.07 Aligned_cols=120 Identities=22% Similarity=0.214 Sum_probs=92.1
Q ss_pred cccccCCCCCcccCCCccccCCCCCcCeEeCccCcccccC----CccccEEEcccCcccCCC------------------
Q 045127 52 HLCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYC----PLGIMSIDLSNNSLKGAF------------------ 109 (508)
Q Consensus 52 ~l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~----p~~l~~L~Ls~N~l~~~~------------------ 109 (508)
+|..|....|.+..+++ +..+++|+.|++++|.++..- ...++.|++++|...+..
T Consensus 64 ~L~~L~ls~n~i~~~~~--l~~l~~l~~l~~~~n~~~~i~~l~~l~~L~~l~l~~~~~~~~~~~~~~~~~~~l~~~~~~~ 141 (227)
T d1h6ua2 64 NLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDLNQI 141 (227)
T ss_dssp TCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCCGGGTTCTTCCEEECTTSCCCCCGGGTTCTTCCEEECCSSCC
T ss_pred CCcEeecCCceeecccc--ccccccccccccccccccccccccccccccccccccccccccchhccccchhhhhchhhhh
Confidence 45566667788888875 999999999999999987421 134577888877765432
Q ss_pred --ChhhhccCCccccccccccccCcCCchhhhcCCccceeccccccccCccccccccccccCCCCccCCCC
Q 045127 110 --PIDVLLCTQIQALDLSYNQLSGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLHSGL 178 (508)
Q Consensus 110 --p~~~~~l~~L~~L~l~~N~l~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~~~n~~ 178 (508)
...+..+++|+.|++++|.++ ..+ .++++++|+.|++++|++++ . +.+..+++|..+++.+|+.
T Consensus 142 ~~~~~~~~~~~L~~L~l~~n~~~-~~~--~l~~l~~L~~L~Ls~n~l~~-l-~~l~~l~~L~~L~Ls~N~l 207 (227)
T d1h6ua2 142 TNISPLAGLTNLQYLSIGNAQVS-DLT--PLANLSKLTTLKADDNKISD-I-SPLASLPNLIEVHLKNNQI 207 (227)
T ss_dssp CCCGGGGGCTTCCEEECCSSCCC-CCG--GGTTCTTCCEEECCSSCCCC-C-GGGGGCTTCCEEECTTSCC
T ss_pred chhhhhccccccccccccccccc-cch--hhcccccceecccCCCccCC-C-hhhcCCCCCCEEECcCCcC
Confidence 134566788999999999988 444 37889999999999999998 3 3477889999999998864
|
| >d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Type IIIa 3',5"-aminoglycoside phosphotransferase species: Enterococcus faecalis [TaxId: 1351]
Probab=98.56 E-value=1.1e-07 Score=88.13 Aligned_cols=162 Identities=9% Similarity=0.028 Sum_probs=109.7
Q ss_pred HHHHHhhcCCCCCceeeecCCeEEEEEEECCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcC-CCCccceeeEEecCCe
Q 045127 231 WMLKAATNGFSKKNLVGKNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQ-HKNLIRVLGWNNSRRT 309 (508)
Q Consensus 231 ~~l~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~ 309 (508)
.++.+..+.|+..+..+.++.+.||+... +++.+++|+....... ....+.+|...+..+. +--+.+++.+...++.
T Consensus 7 ~~l~~~~~~~~~~~~~~G~s~~~v~rv~~-~~~~~vlk~~~~~~~~-~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~ 84 (263)
T d1j7la_ 7 PELKKLIEKYRCVKDTEGMSPAKVYKLVG-ENENLYLKMTDSRYKG-TTYDVEREKDMMLWLEGKLPVPKVLHFERHDGW 84 (263)
T ss_dssp HHHHHHHTTSEEEECSCCCSSSEEEEEEC-SSCEEEEEEECGGGTT-STTCHHHHHHHHHHHTTTSCCCCEEEEEEETTE
T ss_pred HHHHHhhhceEEEEcCCCCCCCcEEEEEe-CCCeEEEEEcCCCccc-chhhHHHHHHHHHHHhccCCCCcEEEEEecCCc
Confidence 35666667777666555555678998875 4566778887533221 2335677888887774 4446778888888888
Q ss_pred eEEEEeecCCCCHHHHhccCCCCHHHHHHHHHHHHHHHHHHhhCC-----------------------------------
Q 045127 310 RAIVTEWTNGGNVELWLSESAPSWKHRLKVLIGVVEAMCYLQEQW----------------------------------- 354 (508)
Q Consensus 310 ~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~~i~~~L~~LH~~~----------------------------------- 354 (508)
.++||++++|.++.+..... .....++.++++.++.||+..
T Consensus 85 ~~lv~~~l~G~~~~~~~~~~----~~~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (263)
T d1j7la_ 85 SNLLMSEADGVLCSEEYEDE----QSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEE 160 (263)
T ss_dssp EEEEEECCSSEEHHHHTTTC----SCHHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCCGGGGST
T ss_pred eEEEEEeccccccccccccc----ccHHHHHHHHHHHHHHHhccCccccccCcchhhhhhhHHHHHHHHhhhhhhhcccc
Confidence 99999999998886654211 112334555566666666421
Q ss_pred -----------------------CccccCCCCCCEEecCCCceEEeeccCCCCCCCcchhhHHHHHHHHH
Q 045127 355 -----------------------PEVDYDLRTGSVLLTDNLEPLISRFKIEYQHRSTKYVYKFGLFLLEM 401 (508)
Q Consensus 355 -----------------------~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~Dv~SlGvil~el 401 (508)
.++|+|+.|.||++++++.+-|+||+.+....+..|+ +.+++.+
T Consensus 161 ~~~~~~~~~~~~~l~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDwe~a~~g~~~~Dl---a~~~~~~ 227 (263)
T d1j7la_ 161 DTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGRADKWYDI---AFCVRSI 227 (263)
T ss_dssp TCSCSSHHHHHHHHHHSCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEEEEHHHHH---HHHHHHH
T ss_pred cccchHHHHHHHHHHhcCCcCCcEEEEeeccCcceeecCCceEEEeechhcccCCHHHHH---HHHHHHh
Confidence 2689999999999998777789999998776666664 4444444
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Probab=98.46 E-value=1.6e-07 Score=90.31 Aligned_cols=97 Identities=24% Similarity=0.260 Sum_probs=69.8
Q ss_pred ccccCCCCCcccCCCccccCCCCCcCeEeCccCcccccCC---ccccEEEcccCcccCCCChhhhccCCccccccccccc
Q 045127 53 LCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWKYCP---LGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQL 129 (508)
Q Consensus 53 l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p---~~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l 129 (508)
+..|+...+.++++|+ . +++|++|+|++|+|+. +| ..++.|++++|+++ .++.. .+.|++|++++|++
T Consensus 40 l~~LdLs~~~L~~lp~-~---~~~L~~L~Ls~N~l~~-lp~~~~~L~~L~l~~n~l~-~l~~l---p~~L~~L~L~~n~l 110 (353)
T d1jl5a_ 40 AHELELNNLGLSSLPE-L---PPHLESLVASCNSLTE-LPELPQSLKSLLVDNNNLK-ALSDL---PPLLEYLGVSNNQL 110 (353)
T ss_dssp CSEEECTTSCCSCCCS-C---CTTCSEEECCSSCCSS-CCCCCTTCCEEECCSSCCS-CCCSC---CTTCCEEECCSSCC
T ss_pred CCEEEeCCCCCCCCCC-C---CCCCCEEECCCCCCcc-cccchhhhhhhhhhhcccc-hhhhh---cccccccccccccc
Confidence 3345555567788885 3 4678888898888874 55 45688888888887 44421 14588888888888
Q ss_pred cCcCCchhhhcCCccceeccccccccCcccccc
Q 045127 130 SGDIPVESFSVLANLTFLNLSYNHFSEMKVSDT 162 (508)
Q Consensus 130 ~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~ 162 (508)
+ .+| . ++.+++|+.|++++|.++. .+...
T Consensus 111 ~-~lp-~-~~~l~~L~~L~l~~~~~~~-~~~~~ 139 (353)
T d1jl5a_ 111 E-KLP-E-LQNSSFLKIIDVDNNSLKK-LPDLP 139 (353)
T ss_dssp S-SCC-C-CTTCTTCCEEECCSSCCSC-CCCCC
T ss_pred c-ccc-c-hhhhccceeeccccccccc-ccccc
Confidence 8 787 3 5678888888888888887 44443
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.41 E-value=6.5e-08 Score=88.52 Aligned_cols=92 Identities=20% Similarity=0.219 Sum_probs=70.1
Q ss_pred CcccCCCccccCCCCCcCeEeCccCcccccCCc------cccEEEcccCcccCCC-ChhhhccCCcccccccc-ccccCc
Q 045127 61 NCVESFPKIDLRSRPKITPLYLSFNFFWKYCPL------GIMSIDLSNNSLKGAF-PIDVLLCTQIQALDLSY-NQLSGD 132 (508)
Q Consensus 61 n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~------~l~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~l~~-N~l~g~ 132 (508)
..++++|+ .+- +++++|+|++|+|+...+. .+++|+|++|.+...+ +..|.++++++++++.. |+++ .
T Consensus 18 ~~l~~iP~-~l~--~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~n~l~-~ 93 (242)
T d1xwdc1 18 SKVTEIPS-DLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLL-Y 93 (242)
T ss_dssp CSCSSCCS-CSC--SCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECCTTCC-E
T ss_pred CCCCCcCC-CCC--CCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeecccccccccccccccccccccc-c
Confidence 35678887 443 5789999999998764332 3489999999887544 45688889999888764 6777 5
Q ss_pred CCchhhhcCCccceeccccccccC
Q 045127 133 IPVESFSVLANLTFLNLSYNHFSE 156 (508)
Q Consensus 133 lp~~~~~~l~~L~~l~l~~N~l~~ 156 (508)
+++..|..+++|+.|++++|+++.
T Consensus 94 ~~~~~~~~l~~L~~l~l~~~~l~~ 117 (242)
T d1xwdc1 94 INPEAFQNLPNLQYLLISNTGIKH 117 (242)
T ss_dssp ECTTSEECCTTCCEEEEESCCCCS
T ss_pred cccccccccccccccccchhhhcc
Confidence 554788889999999999998886
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.26 E-value=9.2e-08 Score=81.98 Aligned_cols=84 Identities=23% Similarity=0.065 Sum_probs=47.6
Q ss_pred cCCCCCcCeEeCccCcccc------cCCccccEEEcccCcccCCC--ChhhhccCCccccccccccccCcCCchhhhcCC
Q 045127 71 LRSRPKITPLYLSFNFFWK------YCPLGIMSIDLSNNSLKGAF--PIDVLLCTQIQALDLSYNQLSGDIPVESFSVLA 142 (508)
Q Consensus 71 ~~~l~~L~~L~L~~N~l~~------~~p~~l~~L~Ls~N~l~~~~--p~~~~~l~~L~~L~l~~N~l~g~lp~~~~~~l~ 142 (508)
+..+..+..|++.+|.+.. .. +.+++|+|++|+|+..- +..+..+++|+.|+|++|+|+ .++.-.+....
T Consensus 38 l~~~~~~~~l~~~~~~~~~l~~~~~~~-~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~-~l~~l~~l~~~ 115 (162)
T d1koha1 38 LVAQNIDVVLNRRSSMAATLRIIEENI-PELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELK-SERELDKIKGL 115 (162)
T ss_dssp TTTTTCCCCTTSHHHHHHHHHHHHHHC-TTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCC-CGGGHHHHTTC
T ss_pred hhhccchhhcchhhhHhhhhHHHHHhC-CCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccc-cchhhhhhhcc
Confidence 4444555555555554321 12 25567777777776432 344566677777777777776 55533333445
Q ss_pred ccceeccccccccC
Q 045127 143 NLTFLNLSYNHFSE 156 (508)
Q Consensus 143 ~L~~l~l~~N~l~~ 156 (508)
+|+.|++++|+++.
T Consensus 116 ~L~~L~L~~Npl~~ 129 (162)
T d1koha1 116 KLEELWLDGNSLSD 129 (162)
T ss_dssp CCSSCCCTTSTTSS
T ss_pred ccceeecCCCCcCc
Confidence 56677777777665
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.26 E-value=7.8e-08 Score=82.44 Aligned_cols=87 Identities=21% Similarity=0.193 Sum_probs=58.5
Q ss_pred CcccCCCccccCCCCCcCeEeCccCcccccCC--------ccccEEEcccCcccCCCChhhhccCCccccccccccccCc
Q 045127 61 NCVESFPKIDLRSRPKITPLYLSFNFFWKYCP--------LGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQLSGD 132 (508)
Q Consensus 61 n~~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p--------~~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~ 132 (508)
+....++. .+..+++|+.|+|++|+|+..-+ +.++.|+|++|+|+...+-.+....+|+.|+|++|.+++.
T Consensus 52 ~~~~~l~~-~~~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~l~~l~~~~L~~L~L~~Npl~~~ 130 (162)
T d1koha1 52 SMAATLRI-IEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDT 130 (162)
T ss_dssp HHHHHHHH-HHHHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCCGGGHHHHTTCCCSSCCCTTSTTSSS
T ss_pred hHhhhhHH-HHHhCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccccchhhhhhhccccceeecCCCCcCcC
Confidence 33334433 45567888889999998875321 3568889999998854443444556788899999988854
Q ss_pred CCc------hhhhcCCccceec
Q 045127 133 IPV------ESFSVLANLTFLN 148 (508)
Q Consensus 133 lp~------~~~~~l~~L~~l~ 148 (508)
... ..+..+++|+.||
T Consensus 131 ~~~~~~y~~~i~~~~P~L~~LD 152 (162)
T d1koha1 131 FRDQSTYISAIRERFPKLLRLD 152 (162)
T ss_dssp SSSHHHHHHHHHTTSTTCCEET
T ss_pred cccchhHHHHHHHHCCCCCEEC
Confidence 431 1255678888775
|
| >d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]
Probab=98.21 E-value=1.2e-06 Score=80.45 Aligned_cols=136 Identities=9% Similarity=-0.063 Sum_probs=90.7
Q ss_pred eeeecCC-eEEEEEEECCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcC--CCCccceeeEEecCCeeEEEEeecCCCC
Q 045127 245 LVGKNEG-AAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQ--HKNLIRVLGWNNSRRTRAIVTEWTNGGN 321 (508)
Q Consensus 245 ~lg~G~~-g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~~~lv~e~~~~gs 321 (508)
.+..|.. +.||+....++..+++|....... ..+..|...++.+. .-.+.+++++..+++..++||++++|.+
T Consensus 17 ~~~~G~s~~~v~r~~~~~~~~~vlK~~~~~~~----~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G~~ 92 (255)
T d1nd4a_ 17 QQTIGCSDAAVFRLSAQGRPVLFVKTDLSGAL----NELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQD 92 (255)
T ss_dssp ECSCTTSSCEEEEEECTTSCCEEEEEECSCTT----SCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEE
T ss_pred EcCCcccCCeEEEEEeCCCCEEEEEeCCccCH----hHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeeccc
Confidence 3445553 678999888888899998754422 34667777777663 3346778888888888899999998866
Q ss_pred HHHHhccCCCCHHHHHHHHHHHHHHHHHHh--------------------------------------------------
Q 045127 322 VELWLSESAPSWKHRLKVLIGVVEAMCYLQ-------------------------------------------------- 351 (508)
Q Consensus 322 L~~~l~~~~l~~~~~~~i~~~i~~~L~~LH-------------------------------------------------- 351 (508)
+.+. ..+. ...+.++++.|+-||
T Consensus 93 ~~~~----~~~~---~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 165 (255)
T d1nd4a_ 93 LLSS----HLAP---AEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARL 165 (255)
T ss_dssp TTTS----CCCH---HHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHH
T ss_pred cccc----cccH---HHHHHHHHHHHHHHccCChhhCCCcccchhhHHHHHHHHHHhhhccccccchhhhhHHHHHHHHH
Confidence 5321 0111 111122223333333
Q ss_pred -hCC------CccccCCCCCCEEecCCCceEEeeccCCCCCCCcchh
Q 045127 352 -EQW------PEVDYDLRTGSVLLTDNLEPLISRFKIEYQHRSTKYV 391 (508)
Q Consensus 352 -~~~------~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~Dv 391 (508)
+.. .++|+|+.|.|||++++..+-|+||+.+....+..|+
T Consensus 166 ~~~~~~~~~~~liHgD~~~~Nvl~~~~~~~~iID~~~~~~g~~~~Dl 212 (255)
T d1nd4a_ 166 KARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVADRYQDI 212 (255)
T ss_dssp HHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEEEETHHHH
T ss_pred HHhCCccCCceEEeCCCCCcceEEeCCceEEEEEchhcccCCHHHHH
Confidence 221 3799999999999998777789999998776666674
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Probab=98.20 E-value=2.1e-06 Score=82.19 Aligned_cols=114 Identities=18% Similarity=0.260 Sum_probs=82.2
Q ss_pred cccccCCCCCcccCCCccccCCCCCcCeEeCccCcccc--cCCccccEEEcccCcccCCCChhhhccCCccccccccccc
Q 045127 52 HLCNESKNPNCVESFPKIDLRSRPKITPLYLSFNFFWK--YCPLGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYNQL 129 (508)
Q Consensus 52 ~l~~L~~~~n~~~~~p~~~~~~l~~L~~L~L~~N~l~~--~~p~~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l 129 (508)
++..|....|.++++|. .+ .+|+.|++++|+++. .+|+.+++|+|++|.++ .+|. ++.+++|+.|++++|.+
T Consensus 59 ~L~~L~Ls~N~l~~lp~-~~---~~L~~L~l~~n~l~~l~~lp~~L~~L~L~~n~l~-~lp~-~~~l~~L~~L~l~~~~~ 132 (353)
T d1jl5a_ 59 HLESLVASCNSLTELPE-LP---QSLKSLLVDNNNLKALSDLPPLLEYLGVSNNQLE-KLPE-LQNSSFLKIIDVDNNSL 132 (353)
T ss_dssp TCSEEECCSSCCSSCCC-CC---TTCCEEECCSSCCSCCCSCCTTCCEEECCSSCCS-SCCC-CTTCTTCCEEECCSSCC
T ss_pred CCCEEECCCCCCccccc-ch---hhhhhhhhhhcccchhhhhccccccccccccccc-cccc-hhhhccceeeccccccc
Confidence 55666777789999997 44 578999999999874 36778999999999999 5664 68899999999999999
Q ss_pred cCcCCchhhhcCCccceeccccccccCccccccccccccCCCCccCCCC
Q 045127 130 SGDIPVESFSVLANLTFLNLSYNHFSEMKVSDTKFFQRFNSSSFLHSGL 178 (508)
Q Consensus 130 ~g~lp~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~l~~~~~~~n~~ 178 (508)
+ ..| .. ...+..+++..+.... ...+..+..+..+.+.+|..
T Consensus 133 ~-~~~-~~---~~~l~~l~~~~~~~~~--~~~l~~l~~l~~L~l~~n~~ 174 (353)
T d1jl5a_ 133 K-KLP-DL---PPSLEFIAAGNNQLEE--LPELQNLPFLTAIYADNNSL 174 (353)
T ss_dssp S-CCC-CC---CTTCCEEECCSSCCSS--CCCCTTCTTCCEEECCSSCC
T ss_pred c-ccc-cc---cccccchhhccccccc--cccccccccceecccccccc
Confidence 8 555 22 3455666666655543 23334455555555555543
|
| >d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Methylthioribose kinase MtnK species: Bacillus subtilis [TaxId: 1423]
Probab=97.93 E-value=1.3e-05 Score=78.45 Aligned_cols=76 Identities=13% Similarity=-0.023 Sum_probs=48.3
Q ss_pred ceeeecCCeEEEEEEEC-CCCEEEEEEecCCC------CHHHHHHHHHHHHHHhhcC-C--CCccceeeEEecCCeeEEE
Q 045127 244 NLVGKNEGAAIYKGILR-DGTRVKIEIYKGDV------SREIRDEFVEECKLLVQFQ-H--KNLIRVLGWNNSRRTRAIV 313 (508)
Q Consensus 244 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~------~~~~~~~~~~E~~~l~~l~-h--~niv~~~~~~~~~~~~~lv 313 (508)
+.||.|....||++... +++.|+||...+.. .+....+...|.+.++.+. + ..+++++.+ +++..++|
T Consensus 32 ~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--d~~~~~lv 109 (392)
T d2pula1 32 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVTV 109 (392)
T ss_dssp EECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEEE
T ss_pred EEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEE--cCCCCEEE
Confidence 56899999999999874 46789999764211 1111234556888777662 2 345566554 44556899
Q ss_pred EeecCCCC
Q 045127 314 TEWTNGGN 321 (508)
Q Consensus 314 ~e~~~~gs 321 (508)
||++++..
T Consensus 110 mE~L~~~~ 117 (392)
T d2pula1 110 MEDLSHLK 117 (392)
T ss_dssp ECCCTTSE
T ss_pred EeccCCcc
Confidence 99997654
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.64 E-value=2.4e-06 Score=84.73 Aligned_cols=85 Identities=20% Similarity=0.189 Sum_probs=44.4
Q ss_pred cCCCCCcCeEeCccCccccc----CC------ccccEEEcccCcccCC----CChhhh-ccCCccccccccccccCc---
Q 045127 71 LRSRPKITPLYLSFNFFWKY----CP------LGIMSIDLSNNSLKGA----FPIDVL-LCTQIQALDLSYNQLSGD--- 132 (508)
Q Consensus 71 ~~~l~~L~~L~L~~N~l~~~----~p------~~l~~L~Ls~N~l~~~----~p~~~~-~l~~L~~L~l~~N~l~g~--- 132 (508)
+..+++|+.|+|++|.|+.. ++ +.|++|||++|.|+.. +...+. ...+|++|+|++|++++.
T Consensus 23 ~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~it~~~~~ 102 (460)
T d1z7xw1 23 LPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCG 102 (460)
T ss_dssp HHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHH
T ss_pred HHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHHhcCCCCCCEEECCCCCccccccc
Confidence 34456666666666666510 11 2356666666666421 111111 123566666666666522
Q ss_pred -CCchhhhcCCccceeccccccccC
Q 045127 133 -IPVESFSVLANLTFLNLSYNHFSE 156 (508)
Q Consensus 133 -lp~~~~~~l~~L~~l~l~~N~l~~ 156 (508)
++ ..+..+++|+.|++++|+++.
T Consensus 103 ~l~-~~l~~~~~L~~L~L~~N~i~~ 126 (460)
T d1z7xw1 103 VLS-STLRTLPTLQELHLSDNLLGD 126 (460)
T ss_dssp HHH-HHTTSCTTCCEEECCSSBCHH
T ss_pred ccc-chhhccccccccccccccchh
Confidence 33 345556666666666666654
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.59 E-value=1.8e-05 Score=73.84 Aligned_cols=59 Identities=22% Similarity=0.250 Sum_probs=24.7
Q ss_pred ccCCccccccccc-cccCcCCchhhhcCCccceecccc-ccccCccccccccccccCCCCcc
Q 045127 115 LCTQIQALDLSYN-QLSGDIPVESFSVLANLTFLNLSY-NHFSEMKVSDTKFFQRFNSSSFL 174 (508)
Q Consensus 115 ~l~~L~~L~l~~N-~l~g~lp~~~~~~l~~L~~l~l~~-N~l~~~~~~~~~~l~~l~~~~~~ 174 (508)
++++|++|+|++| .+++..+ ..+..+++|++|++++ +.++......++.+++|+.+.+.
T Consensus 173 ~~~~L~~L~L~~~~~itd~~~-~~l~~~~~L~~L~L~~C~~i~~~~l~~L~~~~~L~~L~l~ 233 (284)
T d2astb2 173 RCPNLVHLDLSDSVMLKNDCF-QEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVF 233 (284)
T ss_dssp HCTTCSEEECTTCTTCCGGGG-GGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECT
T ss_pred ccccccccccccccCCCchhh-hhhcccCcCCEEECCCCCCCChHHHHHHhcCCCCCEEeee
Confidence 3444555555443 2343333 3344445555555544 33443222233334444444443
|
| >d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: RdoA species: Escherichia coli [TaxId: 562]
Probab=97.57 E-value=7.7e-05 Score=70.75 Aligned_cols=138 Identities=15% Similarity=0.171 Sum_probs=82.0
Q ss_pred eEEEEEEECCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCc--cceee-----EEecCCeeEEEEeecCCCCHH-
Q 045127 252 AAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQHKNL--IRVLG-----WNNSRRTRAIVTEWTNGGNVE- 323 (508)
Q Consensus 252 g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~ni--v~~~~-----~~~~~~~~~lv~e~~~~gsL~- 323 (508)
-.||++..++|+.+++|+.++... ..+++..|...+..|....+ +..+. .....+..+.++++++|..+.
T Consensus 36 N~vy~v~~~dg~~~VlK~~rp~~~--s~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~~~~~l~~~~~G~~~~~ 113 (325)
T d1zyla1 36 NRVYQFQDEDRRRFVVKFYRPERW--TADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGGRQFEA 113 (325)
T ss_dssp SEEEEECCTTCCCEEEEEECTTTS--CHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCCEECCS
T ss_pred ceeEEEEcCCCCEEEEEEeCCCCC--CHHHHHHHHHHHHHHHhcCCCCCCceecCCCeeeeeeeEEEEEEeecCCcCCCC
Confidence 589999999999999999976533 24567778888777642221 11111 223456678899998764321
Q ss_pred ----HHhc-------------------cCCCCHH----------------------HHHHHHHHHHHHHHHHh-hC--CC
Q 045127 324 ----LWLS-------------------ESAPSWK----------------------HRLKVLIGVVEAMCYLQ-EQ--WP 355 (508)
Q Consensus 324 ----~~l~-------------------~~~l~~~----------------------~~~~i~~~i~~~L~~LH-~~--~~ 355 (508)
.+-. ....++. .....+.++...+.-.- +. .+
T Consensus 114 ~~~~~~~~lG~~LA~lH~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~p~~ 193 (325)
T d1zyla1 114 DNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWREDFTVL 193 (325)
T ss_dssp SCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCCSCSCCE
T ss_pred CCHHHHHHHHHHHHHHHhhcccCCccccCCCCHHHHhhhhHHHHHHcCcCCHHHHHHHHHHHHHHHHHHHHhccccCCce
Confidence 1110 0111111 11122222332222221 11 17
Q ss_pred ccccCCCCCCEEecCCCceEEeeccCCCCCCCcchhhH
Q 045127 356 EVDYDLRTGSVLLTDNLEPLISRFKIEYQHRSTKYVYK 393 (508)
Q Consensus 356 iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~Dv~S 393 (508)
+||+|+.|.|||++++ ..++||+.+.....-.|+|.
T Consensus 194 liHgDlh~~NvL~~~~--~~~IDFdd~~~g~~~~DLa~ 229 (325)
T d1zyla1 194 RLHGDCHAGNILWRDG--PMFVDLDDARNGPAVQDLWM 229 (325)
T ss_dssp ECCSSCSGGGEEESSS--EEECCCTTCCEECTTHHHHT
T ss_pred eecCCCCcccEEEeCC--ceEEechhcccCcHHHHHHH
Confidence 8999999999999743 45899999887777778764
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=97.43 E-value=7.9e-06 Score=78.43 Aligned_cols=123 Identities=15% Similarity=0.148 Sum_probs=73.2
Q ss_pred ccccCCCCCcccC-----CCccccCCCCCcCeEeCccCccccc-------------------CCccccEEEcccCcccCC
Q 045127 53 LCNESKNPNCVES-----FPKIDLRSRPKITPLYLSFNFFWKY-------------------CPLGIMSIDLSNNSLKGA 108 (508)
Q Consensus 53 l~~L~~~~n~~~~-----~p~~~~~~l~~L~~L~L~~N~l~~~-------------------~p~~l~~L~Ls~N~l~~~ 108 (508)
|..|+.+.|.++. +.. .+...++|++|+|++|.+... ....++.|++++|+++..
T Consensus 95 L~~L~L~~n~i~~~~~~~l~~-~l~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~i~~~ 173 (344)
T d2ca6a1 95 LHTVRLSDNAFGPTAQEPLID-FLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENG 173 (344)
T ss_dssp CCEEECCSCCCCTTTHHHHHH-HHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGG
T ss_pred cccccccccccccccccchhh-hhcccccchheecccccccccccccccccccccccccccccCcccceeeccccccccc
Confidence 4444555555443 222 344567788888888776411 123457778887777522
Q ss_pred ----CChhhhccCCccccccccccccCc-----CCchhhhcCCccceeccccccccCc----cccccccccccCCCCccC
Q 045127 109 ----FPIDVLLCTQIQALDLSYNQLSGD-----IPVESFSVLANLTFLNLSYNHFSEM----KVSDTKFFQRFNSSSFLH 175 (508)
Q Consensus 109 ----~p~~~~~l~~L~~L~l~~N~l~g~-----lp~~~~~~l~~L~~l~l~~N~l~~~----~~~~~~~l~~l~~~~~~~ 175 (508)
+...+..++.|+.|+|++|+++.. +. ..+..+++|+.|++++|.++.. ....+...++|+.+++.+
T Consensus 174 ~~~~l~~~l~~~~~L~~L~L~~n~i~~~g~~~~l~-~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~~L~~L~Ls~ 252 (344)
T d2ca6a1 174 SMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLL-EGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLND 252 (344)
T ss_dssp GHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHH-TTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTT
T ss_pred ccccccchhhhhhhhcccccccccccccccccchh-hhhcchhhhcccccccccccccccccccccccccccchhhhhhc
Confidence 223345667788888888887621 22 3456677888888888877642 112334556677777777
Q ss_pred CC
Q 045127 176 SG 177 (508)
Q Consensus 176 n~ 177 (508)
|.
T Consensus 253 n~ 254 (344)
T d2ca6a1 253 CL 254 (344)
T ss_dssp CC
T ss_pred Cc
Confidence 64
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.26 E-value=1.9e-05 Score=78.00 Aligned_cols=38 Identities=21% Similarity=0.236 Sum_probs=17.0
Q ss_pred CCccccccccccccC----cCCchhhhcCCccceecccccccc
Q 045127 117 TQIQALDLSYNQLSG----DIPVESFSVLANLTFLNLSYNHFS 155 (508)
Q Consensus 117 ~~L~~L~l~~N~l~g----~lp~~~~~~l~~L~~l~l~~N~l~ 155 (508)
+.|++|+|++|+|++ .++ ..+..+++|++|++++|+|+
T Consensus 369 ~~L~~L~Ls~n~i~~~~~~~l~-~~l~~~~~L~~L~Ls~N~i~ 410 (460)
T d1z7xw1 369 SVLRVLWLADCDVSDSSCSSLA-ATLLANHSLRELDLSNNCLG 410 (460)
T ss_dssp CCCCEEECTTSCCCHHHHHHHH-HHHHHCCCCCEEECCSSSCC
T ss_pred CCCCEEECCCCCCChHHHHHHH-HHHhcCCCCCEEECCCCcCC
Confidence 345555555555541 122 23334445555555555544
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.22 E-value=3.3e-05 Score=71.92 Aligned_cols=84 Identities=19% Similarity=0.133 Sum_probs=57.6
Q ss_pred cCCCCCcCeEeCccCcccccC-------CccccEEEcccCcccCCCChhhhccCCccccccccc-cccC-cCCchhhhcC
Q 045127 71 LRSRPKITPLYLSFNFFWKYC-------PLGIMSIDLSNNSLKGAFPIDVLLCTQIQALDLSYN-QLSG-DIPVESFSVL 141 (508)
Q Consensus 71 ~~~l~~L~~L~L~~N~l~~~~-------p~~l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N-~l~g-~lp~~~~~~l 141 (508)
.....+|++|||+++.++... -+.+++|+|+++.+++..+..++.+++|++|+|+++ .+++ .+. ..+..+
T Consensus 42 ~~~~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~-~l~~~~ 120 (284)
T d2astb2 42 HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQ-TLLSSC 120 (284)
T ss_dssp CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHH-HHHHHC
T ss_pred hccCCCCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCcHHHHHHhcCCCCcCccccccccccccccc-hhhHHH
Confidence 445568888888888776321 135688888888887777777888888888888884 5652 122 334567
Q ss_pred Cccceeccccc-ccc
Q 045127 142 ANLTFLNLSYN-HFS 155 (508)
Q Consensus 142 ~~L~~l~l~~N-~l~ 155 (508)
++|+.|++++. .++
T Consensus 121 ~~L~~L~ls~c~~~~ 135 (284)
T d2astb2 121 SRLDELNLSWCFDFT 135 (284)
T ss_dssp TTCCEEECCCCTTCC
T ss_pred Hhccccccccccccc
Confidence 88888888873 454
|
| >d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Homoserine kinase ThrB species: Agrobacterium tumefaciens [TaxId: 358]
Probab=97.06 E-value=0.0021 Score=59.99 Aligned_cols=169 Identities=10% Similarity=0.023 Sum_probs=93.6
Q ss_pred CCHHHHHHhhcCCCCCceee-----ecCCeEEEEEEECCCCEEEEEEecCCCCHHHHHHHHHHHHHHhhcCC-----CCc
Q 045127 228 FTTWMLKAATNGFSKKNLVG-----KNEGAAIYKGILRDGTRVKIEIYKGDVSREIRDEFVEECKLLVQFQH-----KNL 297 (508)
Q Consensus 228 ~~~~~l~~~~~~~~~~~~lg-----~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h-----~ni 297 (508)
.+.+|+......|..++... .|---+.|+....+|+ +++|++..... .+++..|++++..+.. |..
T Consensus 3 ls~~el~~~l~~Y~lg~~~~~~~i~~G~~N~ny~v~t~~g~-yVLri~~~~~~---~~~l~~~~~~l~~L~~~g~pvp~p 78 (316)
T d2ppqa1 3 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKDP-LILTLYEKRVE---KNDLPFFLGLMQHLAAKGLSCPLP 78 (316)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSCC-EEEEEECC------CCHHHHHHHHHHHHHHTTCCCCCB
T ss_pred CCHHHHHHHHHhCCCCCceEeecCCCCcccCeEEEEECCCc-EEEEEcCCCCC---HHHHHHHHHHHHhhhhcccccccc
Confidence 56788888888998765544 4555778999886654 88999864322 2344556666666532 222
Q ss_pred ccee-e--EEecCCeeEEEEeecCCCCHHH-----------H---hc----------cCCCCH-----------------
Q 045127 298 IRVL-G--WNNSRRTRAIVTEWTNGGNVEL-----------W---LS----------ESAPSW----------------- 333 (508)
Q Consensus 298 v~~~-~--~~~~~~~~~lv~e~~~~gsL~~-----------~---l~----------~~~l~~----------------- 333 (508)
+... | +.........++.+..+..... . ++ ......
T Consensus 79 i~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (316)
T d2ppqa1 79 LPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEV 158 (316)
T ss_dssp CCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGT
T ss_pred ceecCCCcceeeecccceeeeecccccccccchhHHHHHHHHHHhhhhhhhhcccccccccchhhcchhhhHHHHhhhhc
Confidence 2111 0 1112344566666665532210 0 00 000000
Q ss_pred -HHHHHHHHHHHHHHHHHhhCC---CccccCCCCCCEEecCCCceEEeeccCCCCCCCcchhhHHHHHHHHHHh
Q 045127 334 -KHRLKVLIGVVEAMCYLQEQW---PEVDYDLRTGSVLLTDNLEPLISRFKIEYQHRSTKYVYKFGLFLLEMIT 403 (508)
Q Consensus 334 -~~~~~i~~~i~~~L~~LH~~~---~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~Dv~SlGvil~ellt 403 (508)
......+..+...+.-.+... |+||+|+.++||+++.+...-|.||+.+.......| +++++..++.
T Consensus 159 ~~~~~~~l~~~~~~~~~~~~~~L~~giIHgDl~~dNvl~~~~~v~gvIDF~~~~~~~~~~D---LAi~~~~~~~ 229 (316)
T d2ppqa1 159 EKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACNDLLAYD---VSICLNAWCF 229 (316)
T ss_dssp STTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEEEEHHHH---HHHHHHHHSB
T ss_pred chhHHHHHHHHHHhhhccCccccccccccCCcchhhhhcccccceeEecccccccchhhhh---HHHHHHHHhh
Confidence 011122222233333333221 899999999999999888788999999865544445 4777777654
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=96.90 E-value=8.7e-05 Score=70.82 Aligned_cols=104 Identities=13% Similarity=0.129 Sum_probs=63.6
Q ss_pred CCCCcCeEeCccCcccccC----------CccccEEEcccCcccCC-----CChhhhccCCccccccccccccCc----C
Q 045127 73 SRPKITPLYLSFNFFWKYC----------PLGIMSIDLSNNSLKGA-----FPIDVLLCTQIQALDLSYNQLSGD----I 133 (508)
Q Consensus 73 ~l~~L~~L~L~~N~l~~~~----------p~~l~~L~Ls~N~l~~~-----~p~~~~~l~~L~~L~l~~N~l~g~----l 133 (508)
..+.|+.|++++|.++..- ...++.|+|++|+++.. +...+..+++|+.|+|++|.++.. +
T Consensus 156 ~~~~L~~l~l~~n~i~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L 235 (344)
T d2ca6a1 156 NAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSAL 235 (344)
T ss_dssp TCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHH
T ss_pred cCcccceeecccccccccccccccchhhhhhhhcccccccccccccccccchhhhhcchhhhcccccccccccccccccc
Confidence 4567778888888765211 13457888888877631 223456677788888888877522 3
Q ss_pred CchhhhcCCccceeccccccccCccccccc------cccccCCCCccCCC
Q 045127 134 PVESFSVLANLTFLNLSYNHFSEMKVSDTK------FFQRFNSSSFLHSG 177 (508)
Q Consensus 134 p~~~~~~l~~L~~l~l~~N~l~~~~~~~~~------~l~~l~~~~~~~n~ 177 (508)
. ..+..+++|+.|++++|.|++.....+. ....+..+++++|.
T Consensus 236 ~-~~l~~~~~L~~L~Ls~n~i~~~g~~~l~~~l~~~~~~~L~~L~ls~N~ 284 (344)
T d2ca6a1 236 A-IALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNE 284 (344)
T ss_dssp H-HHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSC
T ss_pred c-ccccccccchhhhhhcCccCchhhHHHHHHhhhccCCCCCEEECCCCc
Confidence 3 4456677788888888887752121111 12445666676664
|
| >d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Choline kinase domain: Choline kinase species: Caenorhabditis elegans [TaxId: 6239]
Probab=96.81 E-value=0.0012 Score=63.97 Aligned_cols=72 Identities=10% Similarity=0.167 Sum_probs=49.5
Q ss_pred ceeeecCCeEEEEEEECCC--------CEEEEEEecCCCCHHHHHHHHHHHHHHhhcC-CCCccceeeEEecCCeeEEEE
Q 045127 244 NLVGKNEGAAIYKGILRDG--------TRVKIEIYKGDVSREIRDEFVEECKLLVQFQ-HKNLIRVLGWNNSRRTRAIVT 314 (508)
Q Consensus 244 ~~lg~G~~g~V~~~~~~~~--------~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~ 314 (508)
+.|+.|-.-.+|++..+++ ..|.+++.-.... .....+|..+++.+. +.-..++++++.+ .+||
T Consensus 48 ~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~~~~---~idr~~E~~i~~~ls~~gl~Pkll~~~~~----g~I~ 120 (395)
T d1nw1a_ 48 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPET---ESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLE 120 (395)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCC---HHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEE
T ss_pred EEcCCccccceEEEEeCCCCccccCCCCcEEEEecCCcch---hhHHHHHHHHHHHHHhCCCCCeEEEEcCC----ceEE
Confidence 6788899999999987542 4677777643222 234567888888885 4434577777643 6899
Q ss_pred eecCCCCH
Q 045127 315 EWTNGGNV 322 (508)
Q Consensus 315 e~~~~gsL 322 (508)
||++|.++
T Consensus 121 efi~g~~l 128 (395)
T d1nw1a_ 121 EYIPSRPL 128 (395)
T ss_dssp CCCCEEEC
T ss_pred EEeccccC
Confidence 99987544
|
| >d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=96.39 E-value=0.00045 Score=58.44 Aligned_cols=83 Identities=12% Similarity=0.076 Sum_probs=50.3
Q ss_pred CCCCcCeEeCccC-ccccc--------CC--ccccEEEcccCcccC----CCChhhhccCCccccccccccccCc----C
Q 045127 73 SRPKITPLYLSFN-FFWKY--------CP--LGIMSIDLSNNSLKG----AFPIDVLLCTQIQALDLSYNQLSGD----I 133 (508)
Q Consensus 73 ~l~~L~~L~L~~N-~l~~~--------~p--~~l~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~l~~N~l~g~----l 133 (508)
+.+.|+.|+|+++ .++.. +. ..+++|+|++|.+.. .+...+...+.|+.|+|++|.+++. +
T Consensus 13 n~~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~l 92 (167)
T d1pgva_ 13 DDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARL 92 (167)
T ss_dssp TCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHH
T ss_pred CCCCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHHH
Confidence 3467778888763 45421 11 345777777777763 2223445567788888888887732 1
Q ss_pred CchhhhcCCccceeccccccccC
Q 045127 134 PVESFSVLANLTFLNLSYNHFSE 156 (508)
Q Consensus 134 p~~~~~~l~~L~~l~l~~N~l~~ 156 (508)
- ..+...++|+.|++++|.+..
T Consensus 93 ~-~aL~~n~sL~~L~l~~n~~~~ 114 (167)
T d1pgva_ 93 L-RSTLVTQSIVEFKADNQRQSV 114 (167)
T ss_dssp H-HHTTTTCCCSEEECCCCSSCC
T ss_pred H-HHHHhCCcCCEEECCCCcCCC
Confidence 1 234445678888888776654
|
| >d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=95.58 E-value=0.0017 Score=54.61 Aligned_cols=84 Identities=11% Similarity=0.074 Sum_probs=60.4
Q ss_pred ccCCCCCcCeEeCccCcccccC----------CccccEEEcccCcccCCC----ChhhhccCCccccccccccccCcCCc
Q 045127 70 DLRSRPKITPLYLSFNFFWKYC----------PLGIMSIDLSNNSLKGAF----PIDVLLCTQIQALDLSYNQLSGDIPV 135 (508)
Q Consensus 70 ~~~~l~~L~~L~L~~N~l~~~~----------p~~l~~L~Ls~N~l~~~~----p~~~~~l~~L~~L~l~~N~l~g~lp~ 135 (508)
.+...+.|+.|+|++|.+...- -..++.|+|++|.++..- -..+...+.|++|+|++|.+. .+..
T Consensus 39 ~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~l~~aL~~n~sL~~L~l~~n~~~-~~g~ 117 (167)
T d1pgva_ 39 AACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQS-VLGN 117 (167)
T ss_dssp HHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSC-CCCH
T ss_pred HHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHHHHHHHHhCCcCCEEECCCCcCC-CccH
Confidence 4667788999999999987321 145699999999998432 233556688999999999776 3321
Q ss_pred -------hhhhcCCccceeccccccc
Q 045127 136 -------ESFSVLANLTFLNLSYNHF 154 (508)
Q Consensus 136 -------~~~~~l~~L~~l~l~~N~l 154 (508)
..+..-++|+.|+++++..
T Consensus 118 ~~~~~l~~~L~~n~sL~~l~l~~~~~ 143 (167)
T d1pgva_ 118 QVEMDMMMAIEENESLLRVGISFASM 143 (167)
T ss_dssp HHHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred HHHHHHHHHHHhCCCccEeeCcCCCc
Confidence 3445568888888877644
|
| >d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=94.12 E-value=0.0047 Score=51.63 Aligned_cols=16 Identities=19% Similarity=0.385 Sum_probs=7.9
Q ss_pred ccCCcccccccccccc
Q 045127 115 LCTQIQALDLSYNQLS 130 (508)
Q Consensus 115 ~l~~L~~L~l~~N~l~ 130 (508)
..+.|+.+++++|.++
T Consensus 72 ~~~~l~~l~l~~~~~~ 87 (166)
T d1io0a_ 72 VNNTLKSLNVESNFIS 87 (166)
T ss_dssp HCSSCCEEECCSSCCC
T ss_pred hcccchhhhhcccccc
Confidence 3445555555555543
|
| >d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=94.01 E-value=0.0039 Score=52.15 Aligned_cols=85 Identities=11% Similarity=0.113 Sum_probs=57.8
Q ss_pred ccCCCCCcCeEeCccCcccccC----------CccccEEEcccCcccCC----CChhhhccCCccc--cccccccccC--
Q 045127 70 DLRSRPKITPLYLSFNFFWKYC----------PLGIMSIDLSNNSLKGA----FPIDVLLCTQIQA--LDLSYNQLSG-- 131 (508)
Q Consensus 70 ~~~~l~~L~~L~L~~N~l~~~~----------p~~l~~L~Ls~N~l~~~----~p~~~~~l~~L~~--L~l~~N~l~g-- 131 (508)
.+...++|+.|+|++|.++... -..++.|++++|.++.. +...+...++|+. |++++|.+..
T Consensus 41 al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~~l~~~l~~~~~L~~l~L~l~~n~i~~~~ 120 (166)
T d1io0a_ 41 ALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNV 120 (166)
T ss_dssp HHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHH
T ss_pred HHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchhHHHHHHHHHhCccccEEeeccCCCcCcHHH
Confidence 3567789999999999886321 13558999999988632 2244556677875 5556777753
Q ss_pred --cCCchhhhcCCccceecccccccc
Q 045127 132 --DIPVESFSVLANLTFLNLSYNHFS 155 (508)
Q Consensus 132 --~lp~~~~~~l~~L~~l~l~~N~l~ 155 (508)
.|. ..+...++|+.|+++.|+..
T Consensus 121 ~~~La-~~L~~n~~L~~L~l~~~~~~ 145 (166)
T d1io0a_ 121 EMEIA-NMLEKNTTLLKFGYHFTQQG 145 (166)
T ss_dssp HHHHH-HHHHHCSSCCEEECCCSSHH
T ss_pred HHHHH-HHHHhCCCcCEEeCcCCCCc
Confidence 243 45667788888888776543
|