Query 045128
Match_columns 117
No_of_seqs 135 out of 1159
Neff 8.7
Searched_HMMs 46136
Date Fri Mar 29 10:07:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045128.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/045128hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd03184 GST_C_Omega GST_C fami 99.8 4.5E-18 9.8E-23 109.3 7.5 104 3-108 18-123 (124)
2 cd03201 GST_C_DHAR GST_C famil 99.8 8.8E-18 1.9E-22 108.0 8.8 103 2-107 15-119 (121)
3 cd03185 GST_C_Tau GST_C family 99.7 3E-17 6.4E-22 105.1 10.8 97 11-108 29-125 (126)
4 KOG0406 Glutathione S-transfer 99.7 2.8E-16 6E-21 110.2 10.9 103 11-114 123-227 (231)
5 cd03198 GST_C_CLIC GST_C famil 99.7 8.2E-16 1.8E-20 100.4 9.6 101 3-106 13-132 (134)
6 cd03190 GST_C_ECM4_like GST_C 99.7 6.4E-16 1.4E-20 101.7 8.0 98 11-111 31-131 (142)
7 TIGR00862 O-ClC intracellular 99.6 9E-15 1.9E-19 103.7 10.8 95 13-110 119-232 (236)
8 cd03203 GST_C_Lambda GST_C fam 99.6 2.8E-15 6.1E-20 96.0 7.4 82 21-106 34-119 (120)
9 cd03186 GST_C_SspA GST_N famil 99.6 6.1E-15 1.3E-19 92.1 8.0 77 12-95 30-106 (107)
10 PF00043 GST_C: Glutathione S- 99.6 8.1E-15 1.8E-19 89.5 6.9 71 14-90 25-95 (95)
11 cd03196 GST_C_5 GST_C family, 99.6 1.1E-14 2.3E-19 92.7 7.3 78 14-96 38-115 (115)
12 cd03188 GST_C_Beta GST_C famil 99.6 1.5E-14 3.3E-19 90.7 7.0 74 14-95 40-113 (114)
13 cd03187 GST_C_Phi GST_C family 99.5 3.8E-14 8.2E-19 89.5 7.5 79 11-95 39-117 (118)
14 cd03207 GST_C_8 GST_C family, 99.5 2.6E-14 5.7E-19 88.6 6.3 77 12-97 25-101 (103)
15 cd03209 GST_C_Mu GST_C family, 99.5 5.1E-14 1.1E-18 90.0 7.4 79 13-98 31-109 (121)
16 cd03191 GST_C_Zeta GST_C famil 99.5 1.1E-13 2.4E-18 88.1 7.9 74 17-98 44-119 (121)
17 cd03178 GST_C_Ure2p_like GST_C 99.5 3.9E-14 8.4E-19 89.0 5.6 78 12-96 35-112 (113)
18 PRK09481 sspA stringent starva 99.5 1.5E-13 3.2E-18 95.5 8.7 85 12-102 122-206 (211)
19 cd03183 GST_C_Theta GST_C fami 99.5 1.2E-13 2.7E-18 88.5 7.7 79 11-96 39-120 (126)
20 cd03182 GST_C_GTT2_like GST_C 99.5 1.6E-13 3.6E-18 86.6 7.7 74 12-92 44-117 (117)
21 cd03204 GST_C_GDAP1 GST_C fami 99.5 2.3E-13 5E-18 86.3 7.8 76 12-92 24-111 (111)
22 cd03180 GST_C_2 GST_C family, 99.5 3.3E-13 7.1E-18 84.1 8.2 70 14-92 40-110 (110)
23 cd03206 GST_C_7 GST_C family, 99.5 3.5E-13 7.6E-18 83.3 7.8 73 12-92 28-100 (100)
24 cd03210 GST_C_Pi GST_C family, 99.5 2E-13 4.3E-18 88.0 6.8 77 14-97 32-111 (126)
25 PF13410 GST_C_2: Glutathione 99.5 1.9E-13 4.1E-18 79.1 6.1 68 13-85 2-69 (69)
26 cd03189 GST_C_GTT1_like GST_C 99.5 3.4E-13 7.4E-18 85.4 7.6 68 15-90 52-119 (119)
27 cd03177 GST_C_Delta_Epsilon GS 99.5 3.6E-13 7.8E-18 85.5 7.4 77 13-96 34-110 (118)
28 cd03181 GST_C_EFB1gamma GST_C 99.5 2.2E-13 4.9E-18 86.7 6.3 82 12-98 35-116 (123)
29 PLN02817 glutathione dehydroge 99.4 9.4E-13 2E-17 94.8 9.4 88 19-109 173-262 (265)
30 PLN02378 glutathione S-transfe 99.4 8E-13 1.7E-17 92.1 8.0 88 16-106 117-207 (213)
31 cd03208 GST_C_Alpha GST_C fami 99.4 8.1E-13 1.8E-17 86.5 7.3 70 21-97 43-114 (137)
32 PRK10542 glutathionine S-trans 99.4 1.3E-12 2.9E-17 89.6 7.0 74 16-97 123-196 (201)
33 PRK13972 GSH-dependent disulfi 99.4 1.2E-12 2.7E-17 91.0 6.8 76 13-97 128-204 (215)
34 TIGR01262 maiA maleylacetoacet 99.4 2.9E-12 6.3E-17 88.5 7.7 73 18-98 130-204 (210)
35 PLN02473 glutathione S-transfe 99.4 1.3E-12 2.8E-17 90.6 5.7 78 15-97 133-210 (214)
36 PRK11752 putative S-transferas 99.4 1.9E-12 4.1E-17 93.1 6.6 82 15-97 176-257 (264)
37 PRK10357 putative glutathione 99.3 6.6E-12 1.4E-16 86.4 8.3 79 15-99 123-201 (202)
38 PLN02395 glutathione S-transfe 99.3 3.3E-12 7.2E-17 88.5 6.8 80 13-97 130-209 (215)
39 cd03195 GST_C_4 GST_C family, 99.3 4E-12 8.6E-17 80.7 6.3 72 14-96 39-111 (114)
40 cd03179 GST_C_1 GST_C family, 99.3 7.2E-12 1.6E-16 77.4 6.3 68 12-87 38-105 (105)
41 cd03194 GST_C_3 GST_C family, 99.3 1.1E-11 2.4E-16 78.7 7.1 68 18-96 45-112 (114)
42 PTZ00057 glutathione s-transfe 99.3 4.8E-12 1E-16 87.6 5.9 76 16-98 122-199 (205)
43 cd03202 GST_C_etherase_LigE GS 99.3 9.2E-12 2E-16 80.2 6.6 68 15-88 56-123 (124)
44 cd00299 GST_C_family Glutathio 99.3 3.3E-11 7.2E-16 73.2 7.3 70 12-86 31-100 (100)
45 cd03193 GST_C_Metaxin GST_C fa 99.2 4.3E-11 9.3E-16 72.3 6.2 70 15-87 17-88 (88)
46 COG0625 Gst Glutathione S-tran 99.2 1.2E-10 2.5E-15 80.7 7.4 74 12-93 126-199 (211)
47 cd03192 GST_C_Sigma_like GST_C 99.2 8.8E-11 1.9E-15 72.7 5.7 69 12-86 34-104 (104)
48 cd03200 GST_C_JTV1 GST_C famil 99.1 1.3E-10 2.8E-15 71.8 6.1 58 20-88 38-95 (96)
49 PRK10387 glutaredoxin 2; Provi 99.1 1E-10 2.3E-15 80.7 5.6 67 17-93 142-208 (210)
50 PF14497 GST_C_3: Glutathione 99.1 1.4E-10 3E-15 71.6 4.9 68 12-88 30-99 (99)
51 cd03205 GST_C_6 GST_C family, 99.1 5.6E-10 1.2E-14 68.7 6.8 67 12-86 32-98 (98)
52 PRK15113 glutathione S-transfe 99.1 3.1E-10 6.7E-15 79.0 6.0 74 15-99 135-209 (214)
53 COG0435 ECM4 Predicted glutath 99.0 1E-10 2.2E-15 83.7 2.2 87 10-97 198-285 (324)
54 cd03211 GST_C_Metaxin2 GST_C f 99.0 1.3E-09 2.7E-14 70.5 5.1 70 14-87 54-126 (126)
55 KOG4420 Uncharacterized conser 98.9 6.8E-09 1.5E-13 74.0 8.1 87 14-105 202-294 (325)
56 cd03212 GST_C_Metaxin1_3 GST_C 98.9 4.6E-09 9.9E-14 68.9 6.6 72 14-88 61-134 (137)
57 cd03197 GST_C_mPGES2 GST_C fam 98.9 4.3E-09 9.4E-14 69.7 6.0 67 17-88 79-145 (149)
58 KOG0867 Glutathione S-transfer 98.9 7.4E-09 1.6E-13 73.0 7.4 81 12-97 128-208 (226)
59 TIGR02182 GRXB Glutaredoxin, G 98.9 2.9E-09 6.2E-14 74.0 5.0 67 16-93 140-207 (209)
60 KOG2903 Predicted glutathione 98.7 3.9E-09 8.5E-14 75.2 1.5 86 10-97 196-287 (319)
61 PLN02907 glutamate-tRNA ligase 98.7 4.5E-08 9.8E-13 79.0 6.3 66 21-91 94-159 (722)
62 KOG1695 Glutathione S-transfer 98.7 6E-08 1.3E-12 67.6 5.7 75 18-98 124-200 (206)
63 KOG1422 Intracellular Cl- chan 98.6 1.3E-07 2.8E-12 65.5 6.6 98 10-110 115-217 (221)
64 KOG0868 Glutathione S-transfer 98.3 6.2E-07 1.3E-11 60.9 3.9 73 18-98 133-207 (217)
65 KOG4244 Failed axon connection 97.7 9.8E-06 2.1E-10 58.1 0.9 68 17-88 203-272 (281)
66 PF14834 GST_C_4: Glutathione 97.5 0.00021 4.6E-09 45.3 4.6 71 16-97 42-113 (117)
67 KOG3029 Glutathione S-transfer 97.3 0.00056 1.2E-08 49.8 5.1 66 17-88 288-354 (370)
68 KOG3027 Mitochondrial outer me 97.3 0.00062 1.3E-08 47.6 4.7 73 12-88 172-247 (257)
69 PF04399 Glutaredoxin2_C: Glut 97.2 0.00059 1.3E-08 44.5 4.1 67 16-92 58-124 (132)
70 cd03199 GST_C_GRX2 GST_C famil 96.9 0.0041 8.9E-08 40.3 5.8 66 17-92 60-125 (128)
71 KOG3028 Translocase of outer m 96.3 0.02 4.3E-07 42.2 6.8 70 15-88 161-233 (313)
72 PF11801 Tom37_C: Tom37 C-term 91.5 0.84 1.8E-05 30.9 5.8 37 22-59 113-153 (168)
73 KOG1147 Glutamyl-tRNA syntheta 83.0 0.71 1.5E-05 37.0 1.5 59 21-84 92-150 (712)
74 COG2999 GrxB Glutaredoxin 2 [P 74.9 6.1 0.00013 27.4 3.9 65 19-93 144-208 (215)
75 KOG1668 Elongation factor 1 be 64.2 3.8 8.3E-05 29.2 1.2 58 23-92 10-67 (231)
76 PF09236 AHSP: Alpha-haemoglob 30.9 92 0.002 18.8 3.2 23 7-29 51-73 (89)
77 cd06891 PX_Vps17p The phosphoi 27.9 55 0.0012 21.6 2.1 27 77-107 112-138 (140)
78 TIGR02978 phageshock_pspC phag 25.9 35 0.00076 21.9 0.9 35 12-47 79-114 (121)
79 PF11732 Thoc2: Transcription- 24.3 1.6E+02 0.0035 17.3 3.7 43 37-87 34-76 (77)
80 PF10414 CysG_dimeriser: Siroh 21.9 1.4E+02 0.0031 16.1 2.8 17 81-97 29-45 (60)
81 COG2879 Uncharacterized small 21.4 1.4E+02 0.003 17.0 2.6 14 75-88 21-34 (65)
82 PF14003 YlbE: YlbE-like prote 21.2 1.8E+02 0.0038 16.6 3.1 21 3-23 12-33 (65)
83 PF07182 DUF1402: Protein of u 20.4 1E+02 0.0022 22.7 2.4 22 37-58 172-193 (303)
No 1
>cd03184 GST_C_Omega GST_C family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a re
Probab=99.75 E-value=4.5e-18 Score=109.28 Aligned_cols=104 Identities=18% Similarity=0.360 Sum_probs=83.0
Q ss_pred hhhhhhhcChHHHHHHHHHHHHHHHHhhhcccCC--CceeccCCCchHHHHHHHHHHHHHHHHHHhcCcccCCCCCchHH
Q 045128 3 AVWKMFFSTGQDLENAVKAALEMLQTVEKHGLGE--KKFFNGDNIGLADLAFGAIAYWLQVLEDVMGVKLFESHKFPSWH 80 (117)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~l~~~l~~l~e~~L~~--~~~~~Gd~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~ 80 (117)
+++...+..+++.++..+++.+.|+.+ |+.|++ ++|++|+++|+|||++++.+.++.......+.. ++.+.+|+|.
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~l~~l-e~~L~~~~~~yl~G~~~t~aDi~~~~~~~~~~~~~~~~~~~-~~~~~~p~l~ 95 (124)
T cd03184 18 SAFYKLLGAPSDREEKKAELRSALENL-EEELTKRGTPFFGGDSPGMVDYMIWPWFERLEALKLLLGYE-FPLDRFPKLK 95 (124)
T ss_pred HHHHHHHhccccchhhHHHHHHHHHHH-HHHHHhcCCCCcCCCCccHHHHHhhHHHHHHHHHHhhcccc-CCcccChHHH
Confidence 344444444677788999999999999 999975 799999999999999999888775432221211 1236899999
Q ss_pred HHHHHhhccccchhcCCChhHHHHHHHH
Q 045128 81 EWFENSRKVPVIEENLPNQHEMVIAFKR 108 (117)
Q Consensus 81 ~w~~~~~~~p~~~~~~~~~~~~~~~~~~ 108 (117)
+|+++|.++|+++.++++.+.++++++.
T Consensus 96 ~w~~r~~~~p~v~~~~~~~~~~~~~~~~ 123 (124)
T cd03184 96 KWMDAMKEDPAVQAFYTDTEIHAEFLKS 123 (124)
T ss_pred HHHHHhccChHHHHHhCCHHHHHHHHhc
Confidence 9999999999999999999999998875
No 2
>cd03201 GST_C_DHAR GST_C family, Dehydroascorbate Reductase (DHAR) subfamily; composed of plant-specific DHARs, monomeric enzymes catalyzing the reduction of DHA into ascorbic acid (AsA) using glutathione as the reductant. DHAR allows plants to recycle oxidized AsA before it is lost. AsA serves as a cofactor of violaxanthin de-epoxidase in the xanthophyll cycle and as an antioxidant in the detoxification of reactive oxygen species. Because AsA is the major reductant in plants, DHAR serves to regulate their redox state. It has been suggested that a significant portion of DHAR activity is plastidic, acting to reduce the large amounts of ascorbate oxidized during hydrogen peroxide scavenging by ascorbate peroxidase. DHAR contains a conserved cysteine in its active site and in addition to its reductase activity, shows thiol transferase activity similar to glutaredoxins.
Probab=99.75 E-value=8.8e-18 Score=108.00 Aligned_cols=103 Identities=15% Similarity=0.290 Sum_probs=81.7
Q ss_pred hhhhhhhhcChHHHHHHHHHHHHHHHHhhhcccCC-CceeccCCCchHHHHHHHHHHHHHHH-HHHhcCcccCCCCCchH
Q 045128 2 VAVWKMFFSTGQDLENAVKAALEMLQTVEKHGLGE-KKFFNGDNIGLADLAFGAIAYWLQVL-EDVMGVKLFESHKFPSW 79 (117)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~l~~~l~~l~e~~L~~-~~~~~Gd~~t~aDi~l~~~~~~~~~~-~~~~~~~~~~~~~~P~l 79 (117)
+|.+..++..+.+.++..+++.+.|..| |..|++ ++|++||++|+|||++++.+.++... ....++.. .+.+|+|
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~l~~~l~~L-e~~L~~~~~fl~Gd~~TlADi~l~~~l~~l~~~~~~~~~~~~--~~~~P~l 91 (121)
T cd03201 15 FSTFVGFLKSKDSNDGTEQALLDELEAL-EDHLKENGPFINGEKISAVDLSLAPKLYHLEIALGHYKNWSV--PESLTSV 91 (121)
T ss_pred HHHHHHHHHCCcHHHHHHHHHHHHHHHH-HHHHhcCCCccCCCCCCHHhHHHHHHHHHHHHHHHHhcCCCC--cccchHH
Confidence 4666777665555577788899999999 999974 79999999999999999987666432 11123322 3689999
Q ss_pred HHHHHHhhccccchhcCCChhHHHHHHH
Q 045128 80 HEWFENSRKVPVIEENLPNQHEMVIAFK 107 (117)
Q Consensus 80 ~~w~~~~~~~p~~~~~~~~~~~~~~~~~ 107 (117)
.+|.++|.+||+++.+++..+++++.+.
T Consensus 92 ~~w~~rl~~rps~~~t~~~~~~~~~~~~ 119 (121)
T cd03201 92 KSYMKALFSRESFVKTKAEKEDVIAGWA 119 (121)
T ss_pred HHHHHHHHCCchhhhcCCCHHHHHHHhc
Confidence 9999999999999999999888887764
No 3
>cd03185 GST_C_Tau GST_C family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropi
Probab=99.75 E-value=3e-17 Score=105.10 Aligned_cols=97 Identities=36% Similarity=0.641 Sum_probs=79.9
Q ss_pred ChHHHHHHHHHHHHHHHHhhhcccCCCceeccCCCchHHHHHHHHHHHHHHHHHHhcCcccCCCCCchHHHHHHHhhccc
Q 045128 11 TGQDLENAVKAALEMLQTVEKHGLGEKKFFNGDNIGLADLAFGAIAYWLQVLEDVMGVKLFESHKFPSWHEWFENSRKVP 90 (117)
Q Consensus 11 ~~~~~~~~~~~l~~~l~~l~e~~L~~~~~~~Gd~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~~~~~~p 90 (117)
.++..+...+++.+.++.+ |+.|++++|++|+++|+|||++++++.++.......+.+.++.+.+|++.+|+++|.++|
T Consensus 29 ~~~~~~~~~~~~~~~l~~l-e~~L~~~~~l~G~~~t~ADi~l~~~~~~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p 107 (126)
T cd03185 29 KGEEREKAKEEALEALKVL-EEELGGKPFFGGDTIGYVDIALGSFLGWFRAYEEVGGVKLLDEEKTPLLAAWAERFLELE 107 (126)
T ss_pred chHHHHHHHHHHHHHHHHH-HHHhcCCCCCCCCCcchHHHHHHHHHHHHHHHHHHcCccccCcccCchHHHHHHHHHhcc
Confidence 3455566788899999999 999988899999999999999999998876543333444323467999999999999999
Q ss_pred cchhcCCChhHHHHHHHH
Q 045128 91 VIEENLPNQHEMVIAFKR 108 (117)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~ 108 (117)
+++++.+..+.+++++++
T Consensus 108 ~~~~~~~~~~~~~~~~~~ 125 (126)
T cd03185 108 AVKEVLPDRDKLVEFAKA 125 (126)
T ss_pred HHHHhCCCHHHHHHHHHh
Confidence 999999999888887654
No 4
>KOG0406 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.70 E-value=2.8e-16 Score=110.21 Aligned_cols=103 Identities=29% Similarity=0.538 Sum_probs=89.5
Q ss_pred ChHHHHHHHHHHHHHHHHhhhcccC-CCceeccCCCchHHHHHHHHH-HHHHHHHHHhcCcccCCCCCchHHHHHHHhhc
Q 045128 11 TGQDLENAVKAALEMLQTVEKHGLG-EKKFFNGDNIGLADLAFGAIA-YWLQVLEDVMGVKLFESHKFPSWHEWFENSRK 88 (117)
Q Consensus 11 ~~~~~~~~~~~l~~~l~~l~e~~L~-~~~~~~Gd~~t~aDi~l~~~~-~~~~~~~~~~~~~~~~~~~~P~l~~w~~~~~~ 88 (117)
.+++.+.+.+++.+.|+.+ |+.|. +++||+|+++|++||++.+.+ .|........+.+.+..+.+|+|.+|.++|.+
T Consensus 123 ~~e~~~~~~~e~~e~l~~l-E~el~k~k~~fgG~~~G~vDi~~~p~~~~~~~~~~~~~~~~~~~~~~~P~L~~W~~~~~~ 201 (231)
T KOG0406|consen 123 GGEEQEAAKEELREALKVL-EEELGKGKDFFGGETIGFVDIAIGPSFERWLAVLEKFGGVKFIIEEETPKLIKWIKRMKE 201 (231)
T ss_pred CchHHHHHHHHHHHHHHHH-HHHHhcCCCCCCCCCcCHhhhhHHhhHHHHHHHHHHhcCcccCCCCCCccHHHHHHHHhc
Confidence 4588889999999999999 88887 789999999999999999655 45555555556666667899999999999999
Q ss_pred cccchhcCCChhHHHHHHHHHHHHhc
Q 045128 89 VPVIEENLPNQHEMVIAFKRRQETLV 114 (117)
Q Consensus 89 ~p~~~~~~~~~~~~~~~~~~~~~~~~ 114 (117)
+|+|+.++++.++++++++++++...
T Consensus 202 ~~~V~~~~p~~e~~~e~~~~~~~~~~ 227 (231)
T KOG0406|consen 202 DEAVKAVLPDSEKVVEFMKKYRQGSP 227 (231)
T ss_pred ChhHHhhcCCHHHHHHHHHHHHHhcc
Confidence 99999999999999999999998754
No 5
>cd03198 GST_C_CLIC GST_C family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin, and similar proteins. They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division, and apoptosis. They can exist in both water-soluble and membrane-bound states and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and adopts a fold similar to GSTs, containing an N-terminal domain with a thioredoxin fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. T
Probab=99.67 E-value=8.2e-16 Score=100.39 Aligned_cols=101 Identities=19% Similarity=0.322 Sum_probs=77.7
Q ss_pred hhhhhhhcC--hHHHHHHHHHHHHHHHHhhhcccCC----------------CceeccCCCchHHHHHHHHHHHHHHHH-
Q 045128 3 AVWKMFFST--GQDLENAVKAALEMLQTVEKHGLGE----------------KKFFNGDNIGLADLAFGAIAYWLQVLE- 63 (117)
Q Consensus 3 ~~~~~~~~~--~~~~~~~~~~l~~~l~~l~e~~L~~----------------~~~~~Gd~~t~aDi~l~~~~~~~~~~~- 63 (117)
|-+..++.. ++..+...+.+.+.|+.+ |..|++ ++|++|+++|+|||++++.+.++....
T Consensus 13 ~~~~~~~~~~~~~~~e~~~~~l~~~L~~l-d~~L~~~~~~~~~~~~~~~~~~~~fL~Gd~fTlADi~l~p~L~~~~~~~~ 91 (134)
T cd03198 13 AKFSAYIKNSNPALNENLEKGLLKALKKL-DDYLNSPLPDEIDSAEDEGVSQRKFLDGDELTLADCNLLPKLHIVKVVAK 91 (134)
T ss_pred HHHHHHHcCCChhhhHHHHHHHHHHHHHH-HHHHccCccccccccccccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 344455542 344566678899999999 999976 679999999999999999887665321
Q ss_pred HHhcCcccCCCCCchHHHHHHHhhccccchhcCCChhHHHHHH
Q 045128 64 DVMGVKLFESHKFPSWHEWFENSRKVPVIEENLPNQHEMVIAF 106 (117)
Q Consensus 64 ~~~~~~~~~~~~~P~l~~w~~~~~~~p~~~~~~~~~~~~~~~~ 106 (117)
...++.+ ++++|+|.+|++++.+||+++.+++..+.++..+
T Consensus 92 ~~~g~~i--~~~~P~L~aw~~ri~aRPsfk~t~~~~~~i~~~~ 132 (134)
T cd03198 92 KYRNFEI--PADLTGLWRYLKNAYQREEFTNTCPADQEIELAY 132 (134)
T ss_pred hhcCCCc--cccCHHHHHHHHHHHCCHHHHHHcCCHHHHHHHh
Confidence 1235443 3689999999999999999999999887776654
No 6
>cd03190 GST_C_ECM4_like GST_C family, ECM4-like subfamily; composed of predominantly uncharacterized and taxonomically diverse proteins with similarity to the translation product of the Saccharomyces cerevisiae gene ECM4. ECM4, a gene of unknown function, is involved in cell surface biosynthesis and architecture. S. cerevisiae ECM4 mutants show increased amounts of the cell wall hexose, N-acetylglucosamine. More recently, global gene expression analysis shows that ECM4 is upregulated during genotoxic conditions and together with the expression profiles of 18 other genes could potentially differentiate between genotoxic and cytotoxic insults in yeast.
Probab=99.65 E-value=6.4e-16 Score=101.67 Aligned_cols=98 Identities=15% Similarity=0.258 Sum_probs=78.4
Q ss_pred ChHHHHHHHHHHHHHHHHhhhcccCCCceeccCCCchHHHHHHHHHHHHHHH-HHHh--cCcccCCCCCchHHHHHHHhh
Q 045128 11 TGQDLENAVKAALEMLQTVEKHGLGEKKFFNGDNIGLADLAFGAIAYWLQVL-EDVM--GVKLFESHKFPSWHEWFENSR 87 (117)
Q Consensus 11 ~~~~~~~~~~~l~~~l~~l~e~~L~~~~~~~Gd~~t~aDi~l~~~~~~~~~~-~~~~--~~~~~~~~~~P~l~~w~~~~~ 87 (117)
+++..+...+++.+.|+.+ |+.|++++|++|+++|+|||++++++.+.... .... +... ...||+|.+|+++|.
T Consensus 31 ~~~~~~~~~~~l~~~l~~L-E~~L~~~~yl~Gd~~TlADi~l~~~l~~~~~~~~~~~~~~~~~--~~~~P~L~~w~~r~~ 107 (142)
T cd03190 31 TQEAYDEAVDELFEALDRL-EELLSDRRYLLGDRLTEADIRLFTTLIRFDAVYVQHFKCNLKR--IRDYPNLWNYLRRLY 107 (142)
T ss_pred CHHHHHHHHHHHHHHHHHH-HHHHccCCeeeCCCccHHHHHHHHHHHHHHHHhhhhcccccch--hhhCchHHHHHHHHh
Confidence 5666778889999999999 99998889999999999999999887654321 1111 1111 258999999999999
Q ss_pred ccccchhcCCChhHHHHHHHHHHH
Q 045128 88 KVPVIEENLPNQHEMVIAFKRRQE 111 (117)
Q Consensus 88 ~~p~~~~~~~~~~~~~~~~~~~~~ 111 (117)
++|+++++++..+-+..|++++++
T Consensus 108 ~~P~~k~~~~~~~~~~~~~~~~~~ 131 (142)
T cd03190 108 QNPGVAETTNFDHIKQHYYGSHFP 131 (142)
T ss_pred cCchHhhhcCHHHHHHHHHhhcCC
Confidence 999999998888888888888753
No 7
>TIGR00862 O-ClC intracellular chloride channel protein. These proteins are thought to function in the regulation of the membrane potential and in transepithelial ion absorption and secretion in the kidney.
Probab=99.61 E-value=9e-15 Score=103.67 Aligned_cols=95 Identities=19% Similarity=0.330 Sum_probs=79.4
Q ss_pred HHHHHHHHHHHHHHHHhhhcccC------------------CCceeccCCCchHHHHHHHHHHHHHHH-HHHhcCcccCC
Q 045128 13 QDLENAVKAALEMLQTVEKHGLG------------------EKKFFNGDNIGLADLAFGAIAYWLQVL-EDVMGVKLFES 73 (117)
Q Consensus 13 ~~~~~~~~~l~~~l~~l~e~~L~------------------~~~~~~Gd~~t~aDi~l~~~~~~~~~~-~~~~~~~~~~~ 73 (117)
+..++..+++.+.++.| |+.|. +++||+|+++|+|||++++.+.++... ..+.++++ +
T Consensus 119 ~~~~~~~~~l~~~l~~L-e~~L~~~~~~~~~~~~~~~~~~~~~~f~~Gd~~tlaD~~l~p~l~~l~~~~~~~~~~~i--~ 195 (236)
T TIGR00862 119 EANDNLEKGLLKALKKL-DDYLNSPLPEEIDEDSAEDEKVSRRKFLDGDELTLADCNLLPKLHIVKVVAKKYRNFDI--P 195 (236)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHhccccccccccccccccccCCCcccCCccchhhHHHHHHHHHHHHHHHHHhCcCc--c
Confidence 34455556688999999 88885 579999999999999999999888753 34557665 4
Q ss_pred CCCchHHHHHHHhhccccchhcCCChhHHHHHHHHHH
Q 045128 74 HKFPSWHEWFENSRKVPVIEENLPNQHEMVIAFKRRQ 110 (117)
Q Consensus 74 ~~~P~l~~w~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 110 (117)
+++|+|.+|++++.++|+|+.++|+.+.++..+....
T Consensus 196 ~~~p~l~~w~~~~~~~~sf~~t~p~~~~i~~~~~~~~ 232 (236)
T TIGR00862 196 AEFTGVWRYLSNAYAREEFTNTCPDDKEIELAYADVA 232 (236)
T ss_pred ccCchHHHHHHHHhccchHHhhCCChHHHHHHHHHHh
Confidence 7999999999999999999999999999988887664
No 8
>cd03203 GST_C_Lambda GST_C family, Class Lambda subfamily; composed of plant-specific class Lambda GSTs. GSTs are cytosolic, usually dimeric, proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Lambda subfamily was recently discovered, together with dehydroascorbate reductases (DHARs), as two outlying groups of the GST superfamily in Arabidopsis thaliana, which contain conserved active site cysteines. Characterization of recombinant A. thaliana proteins show that Lambda class GSTs are monomeric, similar
Probab=99.61 E-value=2.8e-15 Score=96.00 Aligned_cols=82 Identities=20% Similarity=0.391 Sum_probs=65.8
Q ss_pred HHHHHHHHhhhcccC---CCceeccCCCchHHHHHHHHHHHHHH-HHHHhcCcccCCCCCchHHHHHHHhhccccchhcC
Q 045128 21 AALEMLQTVEKHGLG---EKKFFNGDNIGLADLAFGAIAYWLQV-LEDVMGVKLFESHKFPSWHEWFENSRKVPVIEENL 96 (117)
Q Consensus 21 ~l~~~l~~l~e~~L~---~~~~~~Gd~~t~aDi~l~~~~~~~~~-~~~~~~~~~~~~~~~P~l~~w~~~~~~~p~~~~~~ 96 (117)
++.+.++.+ |+.|+ +++|++| ++|+|||++++++.++.. .....+.++. +++|+|.+|+++|.++|+++++.
T Consensus 34 ~~~~~l~~L-e~~L~~~~~~~fl~G-~~tlADi~l~~~~~~~~~~~~~~~~~~~~--~~~P~l~~W~~~~~~rp~~~~~~ 109 (120)
T cd03203 34 EAAAALDYI-ENALSKFDDGPFFLG-QFSLVDIAYVPFIERFQIFLSELFNYDIT--EGRPNLAAWIEEMNKIEAYTQTK 109 (120)
T ss_pred HHHHHHHHH-HHHHHhcCCCCCcCC-CccHHHHHHHHHHHHHHHHHHHhcCcccc--ccCcHHHHHHHHHhcchHHHhHc
Confidence 456677778 77775 4799999 999999999999876643 2233455542 58999999999999999999999
Q ss_pred CChhHHHHHH
Q 045128 97 PNQHEMVIAF 106 (117)
Q Consensus 97 ~~~~~~~~~~ 106 (117)
++.+++++++
T Consensus 110 ~~~~~~~~~~ 119 (120)
T cd03203 110 QDPQELLDLA 119 (120)
T ss_pred CCHHHHHhhh
Confidence 9999998865
No 9
>cd03186 GST_C_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.
Probab=99.60 E-value=6.1e-15 Score=92.08 Aligned_cols=77 Identities=18% Similarity=0.314 Sum_probs=64.7
Q ss_pred hHHHHHHHHHHHHHHHHhhhcccCCCceeccCCCchHHHHHHHHHHHHHHHHHHhcCcccCCCCCchHHHHHHHhhcccc
Q 045128 12 GQDLENAVKAALEMLQTVEKHGLGEKKFFNGDNIGLADLAFGAIAYWLQVLEDVMGVKLFESHKFPSWHEWFENSRKVPV 91 (117)
Q Consensus 12 ~~~~~~~~~~l~~~l~~l~e~~L~~~~~~~Gd~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~~~~~~p~ 91 (117)
++..+...+.+.+.|..+ |+.|++++|++|+++|+|||++++++.++.. .+.++. ..+|+|.+|+++|.+||+
T Consensus 30 ~~~~~~~~~~~~~~l~~l-e~~L~~~~~l~G~~~t~aDi~~~~~~~~~~~----~~~~~~--~~~p~l~~w~~~~~~rpa 102 (107)
T cd03186 30 KKEAEKARKELRESLLAL-APVFAHKPYFMSEEFSLVDCALAPLLWRLPA----LGIELP--KQAKPLKDYMERVFARDS 102 (107)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHcCCCcccCCCCcHHHHHHHHHHHHHHH----cCCCCc--ccchHHHHHHHHHHCCHH
Confidence 555677888899999999 9999989999999999999999998755532 354432 479999999999999999
Q ss_pred chhc
Q 045128 92 IEEN 95 (117)
Q Consensus 92 ~~~~ 95 (117)
++.+
T Consensus 103 ~~~~ 106 (107)
T cd03186 103 FQKS 106 (107)
T ss_pred HHHh
Confidence 9864
No 10
>PF00043 GST_C: Glutathione S-transferase, C-terminal domain; InterPro: IPR004046 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of cephalopods is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold. Each monomer is composed of a distinct N-terminal sub-domain, which adopts the thioredoxin fold, and a C-terminal all-helical sub-domain. This entry is the C-terminal domain.; PDB: 3UAP_A 3UAR_A 3QAV_A 3QAW_A 1Y6E_A 1U88_B 4AI6_B 1UA5_A 4AKH_A 3QMZ_S ....
Probab=99.58 E-value=8.1e-15 Score=89.46 Aligned_cols=71 Identities=27% Similarity=0.520 Sum_probs=59.0
Q ss_pred HHHHHHHHHHHHHHHhhhcccCCCceeccCCCchHHHHHHHHHHHHHHHHHHhcCcccCCCCCchHHHHHHHhhccc
Q 045128 14 DLENAVKAALEMLQTVEKHGLGEKKFFNGDNIGLADLAFGAIAYWLQVLEDVMGVKLFESHKFPSWHEWFENSRKVP 90 (117)
Q Consensus 14 ~~~~~~~~l~~~l~~l~e~~L~~~~~~~Gd~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~~~~~~p 90 (117)
.++....++.+.|..+ |+.|++++|++||++|+||+++++.+.|+... +.... .+.+|+|.+|+++|.+||
T Consensus 25 ~~~~~~~~~~~~l~~l-e~~l~~~~~l~G~~~t~ADi~~~~~~~~~~~~----~~~~~-~~~~P~l~~w~~~~~~~P 95 (95)
T PF00043_consen 25 MVEEARAKVPRYLEVL-EKRLKGGPYLVGDKLTIADIALFPMLDWLERL----GPDFL-FEKFPKLKKWYERMFARP 95 (95)
T ss_dssp HHHHHHHHHHHHHHHH-HHHHHTSSSSSBSS-CHHHHHHHHHHHHHHHH----TTTTT-HTTSHHHHHHHHHHHTSH
T ss_pred HHHHHHHHHHHHHHHH-HHHHcCCCeeeccCCchhHHHHHHHHHHHHHh----CCCcc-cccCHHHHHHHHHHHcCC
Confidence 4566778888999999 99999999999999999999999999888542 33221 268999999999999997
No 11
>cd03196 GST_C_5 GST_C family, unknown subfamily 5; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.57 E-value=1.1e-14 Score=92.72 Aligned_cols=78 Identities=19% Similarity=0.340 Sum_probs=63.6
Q ss_pred HHHHHHHHHHHHHHHhhhcccCCCceeccCCCchHHHHHHHHHHHHHHHHHHhcCcccCCCCCchHHHHHHHhhccccch
Q 045128 14 DLENAVKAALEMLQTVEKHGLGEKKFFNGDNIGLADLAFGAIAYWLQVLEDVMGVKLFESHKFPSWHEWFENSRKVPVIE 93 (117)
Q Consensus 14 ~~~~~~~~l~~~l~~l~e~~L~~~~~~~Gd~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~~~~~~p~~~ 93 (117)
+.+...+++.+.++.+ |+.|++++|++||++|+|||++++++.++... ....++.+++|+|.+|++++.++|+++
T Consensus 38 ~~~~~~~~i~~~l~~l-e~~L~~~~yl~Gd~~tlADi~l~~~l~~~~~~----~~~~~~~~~~P~L~~w~~r~~~rpa~~ 112 (115)
T cd03196 38 SEEEYRQQAEAFLKDL-EARLQQHSYLLGDKPSLADWAIFPFVRQFAHV----DPKWFDQSPYPRLRRWLNGFLASPLFS 112 (115)
T ss_pred cHHHHHHHHHHHHHHH-HHHHccCCccCCCCccHHHHHHHHHHHHHHHh----hhcccCcccCHHHHHHHHHHHcChHHH
Confidence 5677888999999999 99999889999999999999999887665321 111122368999999999999999998
Q ss_pred hcC
Q 045128 94 ENL 96 (117)
Q Consensus 94 ~~~ 96 (117)
+++
T Consensus 113 ~~~ 115 (115)
T cd03196 113 KIM 115 (115)
T ss_pred hhC
Confidence 753
No 12
>cd03188 GST_C_Beta GST_C family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site for
Probab=99.56 E-value=1.5e-14 Score=90.70 Aligned_cols=74 Identities=15% Similarity=0.267 Sum_probs=61.8
Q ss_pred HHHHHHHHHHHHHHHhhhcccCCCceeccCCCchHHHHHHHHHHHHHHHHHHhcCcccCCCCCchHHHHHHHhhccccch
Q 045128 14 DLENAVKAALEMLQTVEKHGLGEKKFFNGDNIGLADLAFGAIAYWLQVLEDVMGVKLFESHKFPSWHEWFENSRKVPVIE 93 (117)
Q Consensus 14 ~~~~~~~~l~~~l~~l~e~~L~~~~~~~Gd~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~~~~~~p~~~ 93 (117)
..+...+++.+.++.+ |+.|++++|++|+++|+|||++++.+.++.. .+.+ .+.+|+|.+|+++|.++|+++
T Consensus 40 ~~~~~~~~~~~~l~~l-e~~l~~~~~l~G~~~t~aDi~~~~~~~~~~~----~~~~---~~~~p~l~~w~~~~~~~p~~k 111 (114)
T cd03188 40 VKAAARERLAARLAYL-DAQLAGGPYLLGDRFSVADAYLFVVLRWAPG----VGLD---LSDWPNLAAYLARVAARPAVQ 111 (114)
T ss_pred HHHHHHHHHHHHHHHH-HHHhcCCCeeeCCCcchHHHHHHHHHHHHhh----cCCC---hhhChHHHHHHHHHHhCHHhH
Confidence 3456677889999999 9999888999999999999999998877642 2322 257999999999999999998
Q ss_pred hc
Q 045128 94 EN 95 (117)
Q Consensus 94 ~~ 95 (117)
++
T Consensus 112 ~~ 113 (114)
T cd03188 112 AA 113 (114)
T ss_pred hh
Confidence 75
No 13
>cd03187 GST_C_Phi GST_C family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes a
Probab=99.53 E-value=3.8e-14 Score=89.50 Aligned_cols=79 Identities=19% Similarity=0.275 Sum_probs=63.8
Q ss_pred ChHHHHHHHHHHHHHHHHhhhcccCCCceeccCCCchHHHHHHHHHHHHHHHHHHhcCcccCCCCCchHHHHHHHhhccc
Q 045128 11 TGQDLENAVKAALEMLQTVEKHGLGEKKFFNGDNIGLADLAFGAIAYWLQVLEDVMGVKLFESHKFPSWHEWFENSRKVP 90 (117)
Q Consensus 11 ~~~~~~~~~~~l~~~l~~l~e~~L~~~~~~~Gd~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~~~~~~p 90 (117)
.++..+...+++.+.++.+ |+.|++++|++|+++|+|||++++++.++.. .+... ..+.+|+|.+|++++.++|
T Consensus 39 ~~~~~~~~~~~~~~~l~~l-e~~L~~~~~l~G~~~t~aDi~l~~~~~~~~~----~~~~~-~~~~~p~l~~~~~~~~~~p 112 (118)
T cd03187 39 DEAVVEENEEKLKKVLDVY-EARLSKSKYLAGDSFTLADLSHLPYLQYLMA----TPFAK-LFDSRPHVKAWWEDISARP 112 (118)
T ss_pred CHHHHHHHHHHHHHHHHHH-HHHcccCcccCCCCccHHHHHHHHHHHHHHH----ccchh-hhhcCchHHHHHHHHHhCH
Confidence 3455667788899999999 9999888999999999999999998877642 11111 1257999999999999999
Q ss_pred cchhc
Q 045128 91 VIEEN 95 (117)
Q Consensus 91 ~~~~~ 95 (117)
+++++
T Consensus 113 ~~~~~ 117 (118)
T cd03187 113 AWKKV 117 (118)
T ss_pred HHHhh
Confidence 99865
No 14
>cd03207 GST_C_8 GST_C family, unknown subfamily 8; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.53 E-value=2.6e-14 Score=88.63 Aligned_cols=77 Identities=14% Similarity=0.296 Sum_probs=65.2
Q ss_pred hHHHHHHHHHHHHHHHHhhhcccCCCceeccCCCchHHHHHHHHHHHHHHHHHHhcCcccCCCCCchHHHHHHHhhcccc
Q 045128 12 GQDLENAVKAALEMLQTVEKHGLGEKKFFNGDNIGLADLAFGAIAYWLQVLEDVMGVKLFESHKFPSWHEWFENSRKVPV 91 (117)
Q Consensus 12 ~~~~~~~~~~l~~~l~~l~e~~L~~~~~~~Gd~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~~~~~~p~ 91 (117)
++..+...+++.+.++.+ |+.|++++|++|+++|+|||++++++.|... .+ .+ +.+|+|.+|++++.++|+
T Consensus 25 ~~~~~~~~~~~~~~l~~l-e~~l~~~~~l~g~~~t~aDi~~~~~~~~~~~----~~--~~--~~~p~l~~w~~~~~~~p~ 95 (103)
T cd03207 25 EPARMAGFGSYDDVLAAL-EQALAKGPYLLGERFTAADVLVGSPLGWGLQ----FG--LL--PERPAFDAYIARITDRPA 95 (103)
T ss_pred cchhhhhhhhHHHHHHHH-HHHHccCCcccCCccCHHHHHHHHHHHHHHH----cC--CC--CCChHHHHHHHHHHcCHH
Confidence 345677788899999999 9999988999999999999999999988743 12 22 579999999999999999
Q ss_pred chhcCC
Q 045128 92 IEENLP 97 (117)
Q Consensus 92 ~~~~~~ 97 (117)
++.+..
T Consensus 96 ~~~~~~ 101 (103)
T cd03207 96 FQRAAA 101 (103)
T ss_pred HHHHhc
Confidence 987653
No 15
>cd03209 GST_C_Mu GST_C family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the m
Probab=99.52 E-value=5.1e-14 Score=90.00 Aligned_cols=79 Identities=16% Similarity=0.302 Sum_probs=64.6
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCCCceeccCCCchHHHHHHHHHHHHHHHHHHhcCcccCCCCCchHHHHHHHhhccccc
Q 045128 13 QDLENAVKAALEMLQTVEKHGLGEKKFFNGDNIGLADLAFGAIAYWLQVLEDVMGVKLFESHKFPSWHEWFENSRKVPVI 92 (117)
Q Consensus 13 ~~~~~~~~~l~~~l~~l~e~~L~~~~~~~Gd~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~~~~~~p~~ 92 (117)
+..+...+.+.+.+..+ |+.|++++|++|+++|+||+++++++.|+.. .+...+ +.||+|.+|++++.++|++
T Consensus 31 ~~~~~~~~~~~~~l~~l-e~~L~~~~~l~G~~~T~aDi~l~~~~~~~~~----~~~~~~--~~~P~l~~~~~rv~~~p~v 103 (121)
T cd03209 31 KLKPDYLAKLPDKLKLF-SDFLGDRPWFAGDKITYVDFLLYEALDQHRI----FEPDCL--DAFPNLKDFLERFEALPKI 103 (121)
T ss_pred HHHHHHHHHHHHHHHHH-HHHhCCCCCcCCCCccHHHHHHHHHHHHHHH----hCcccc--ccChHHHHHHHHHHHCHHH
Confidence 33455667788899999 9999888999999999999999999888753 122223 5899999999999999999
Q ss_pred hhcCCC
Q 045128 93 EENLPN 98 (117)
Q Consensus 93 ~~~~~~ 98 (117)
++++..
T Consensus 104 k~~~~~ 109 (121)
T cd03209 104 SAYMKS 109 (121)
T ss_pred HHHHhc
Confidence 987654
No 16
>cd03191 GST_C_Zeta GST_C family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates, but display modest GSH peroxidase activity. They are also implicated in the detoxification of th
Probab=99.50 E-value=1.1e-13 Score=88.12 Aligned_cols=74 Identities=20% Similarity=0.256 Sum_probs=60.9
Q ss_pred HHHHHHHHHHHHhhhcccC--CCceeccCCCchHHHHHHHHHHHHHHHHHHhcCcccCCCCCchHHHHHHHhhccccchh
Q 045128 17 NAVKAALEMLQTVEKHGLG--EKKFFNGDNIGLADLAFGAIAYWLQVLEDVMGVKLFESHKFPSWHEWFENSRKVPVIEE 94 (117)
Q Consensus 17 ~~~~~l~~~l~~l~e~~L~--~~~~~~Gd~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~~~~~~p~~~~ 94 (117)
...+.+.+.|..+ |+.|+ .++|++|+++|+|||++++++.|+.. .+.+ .+.+|+|.+|++++.++|++++
T Consensus 44 ~~~~~~~~~l~~l-e~~L~~~~~~~l~G~~~t~ADi~~~~~~~~~~~----~~~~---~~~~p~l~~w~~~~~~~p~~~~ 115 (121)
T cd03191 44 WYRHWIARGFAAL-EKLLAQTAGKFCFGDEPTLADICLVPQVYNARR----FGVD---LSPYPTIARINEACLELPAFQA 115 (121)
T ss_pred HHHHHHHHHHHHH-HHHHHhcCCCeecCCcCCHHHHHHHHHHHHHHH----hCCC---cccCcHHHHHHHHHHhChhHHH
Confidence 3456688899999 99997 35799999999999999998877643 2332 2689999999999999999999
Q ss_pred cCCC
Q 045128 95 NLPN 98 (117)
Q Consensus 95 ~~~~ 98 (117)
+.+.
T Consensus 116 ~~~~ 119 (121)
T cd03191 116 AHPD 119 (121)
T ss_pred hCcC
Confidence 8764
No 17
>cd03178 GST_C_Ure2p_like GST_C family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The N-terminal thioredoxin-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of GSH with a wide range of en
Probab=99.50 E-value=3.9e-14 Score=88.99 Aligned_cols=78 Identities=19% Similarity=0.403 Sum_probs=64.4
Q ss_pred hHHHHHHHHHHHHHHHHhhhcccCCCceeccCCCchHHHHHHHHHHHHHHHHHHhcCcccCCCCCchHHHHHHHhhcccc
Q 045128 12 GQDLENAVKAALEMLQTVEKHGLGEKKFFNGDNIGLADLAFGAIAYWLQVLEDVMGVKLFESHKFPSWHEWFENSRKVPV 91 (117)
Q Consensus 12 ~~~~~~~~~~l~~~l~~l~e~~L~~~~~~~Gd~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~~~~~~p~ 91 (117)
++..++..+++.+.|+.+ |+.|++++|++|+++|+|||++++++.+... .+.+. ...+|++.+|.++|.++|+
T Consensus 35 ~~~~~~~~~~~~~~l~~l-e~~L~~~~~l~G~~~t~aDi~l~~~~~~~~~----~~~~~--~~~~p~l~~w~~~~~~~p~ 107 (113)
T cd03178 35 PYAIERYTNEAKRLYGVL-DKRLAGRDYLAGDEYSIADIAIFPWVRRLEW----IGIDD--LDDFPNVKRWLDRIAARPA 107 (113)
T ss_pred hHHHHHHHHHHHHHHHHH-HHHHccCCcccCCCCCeeeeeHHHHHHHHHh----ccccc--hhhchHHHHHHHHHhhCHH
Confidence 445566778899999999 9999888999999999999999998877643 22221 3679999999999999999
Q ss_pred chhcC
Q 045128 92 IEENL 96 (117)
Q Consensus 92 ~~~~~ 96 (117)
++.++
T Consensus 108 ~~~~~ 112 (113)
T cd03178 108 VQRGL 112 (113)
T ss_pred HHHhc
Confidence 98754
No 18
>PRK09481 sspA stringent starvation protein A; Provisional
Probab=99.50 E-value=1.5e-13 Score=95.52 Aligned_cols=85 Identities=18% Similarity=0.269 Sum_probs=68.9
Q ss_pred hHHHHHHHHHHHHHHHHhhhcccCCCceeccCCCchHHHHHHHHHHHHHHHHHHhcCcccCCCCCchHHHHHHHhhcccc
Q 045128 12 GQDLENAVKAALEMLQTVEKHGLGEKKFFNGDNIGLADLAFGAIAYWLQVLEDVMGVKLFESHKFPSWHEWFENSRKVPV 91 (117)
Q Consensus 12 ~~~~~~~~~~l~~~l~~l~e~~L~~~~~~~Gd~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~~~~~~p~ 91 (117)
++..+...+.+.+.+..+ |+.|++++|++|+++|+||+++++.+.++.. .+.++. ...+|+|.+|++++.+||+
T Consensus 122 ~~~~~~~~~~l~~~l~~l-e~~L~~~~~l~G~~~t~AD~~l~~~~~~~~~----~~~~~~-~~~~p~l~~w~~~~~~rp~ 195 (211)
T PRK09481 122 ASEADAARKQLREELLAI-APVFGEKPYFMSEEFSLVDCYLAPLLWRLPV----LGIELS-GPGAKELKGYMTRVFERDS 195 (211)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHhccCCcccCCCccHHHHHHHHHHHHHHh----cCCCCC-CCCChhHHHHHHHHhccHH
Confidence 445566777889999999 9999888999999999999999998866542 344432 2579999999999999999
Q ss_pred chhcCCChhHH
Q 045128 92 IEENLPNQHEM 102 (117)
Q Consensus 92 ~~~~~~~~~~~ 102 (117)
+++++.+.++-
T Consensus 196 ~~~~~~~~~~~ 206 (211)
T PRK09481 196 FLASLTEAERE 206 (211)
T ss_pred HHHHcCHHHHH
Confidence 99988765443
No 19
>cd03183 GST_C_Theta GST_C family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenatio
Probab=99.50 E-value=1.2e-13 Score=88.46 Aligned_cols=79 Identities=23% Similarity=0.381 Sum_probs=63.0
Q ss_pred ChHHHHHHHHHHHHHHHHhhhcc-cCCCceeccCCCchHHHHHHHHHHHHHHHHHHhcCcccCCCCCchHHHHHHHhhc-
Q 045128 11 TGQDLENAVKAALEMLQTVEKHG-LGEKKFFNGDNIGLADLAFGAIAYWLQVLEDVMGVKLFESHKFPSWHEWFENSRK- 88 (117)
Q Consensus 11 ~~~~~~~~~~~l~~~l~~l~e~~-L~~~~~~~Gd~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~~~~~- 88 (117)
.++..+...+++.+.++.+ |+. +++++|++||++|+|||++++.+.+... .+.+.+ +.+|+|.+|+++|.+
T Consensus 39 ~~~~~~~~~~~~~~~l~~l-e~~l~~~~~~l~Gd~~t~ADi~l~~~~~~~~~----~~~~~~--~~~p~l~~w~~~~~~~ 111 (126)
T cd03183 39 SPEKVKKAEENLEESLDLL-ENYFLKDKPFLAGDEISIADLSAVCEIMQPEA----AGYDVF--EGRPKLAAWRKRVKEA 111 (126)
T ss_pred CHHHHHHHHHHHHHHHHHH-HHHHhcCCCcccCCCCCHHHHHHHHHHHHHHh----cCCccc--ccCchHHHHHHHHHHh
Confidence 3555667778899999999 886 5557899999999999999988776642 233322 689999999999999
Q ss_pred -cccchhcC
Q 045128 89 -VPVIEENL 96 (117)
Q Consensus 89 -~p~~~~~~ 96 (117)
||+++++.
T Consensus 112 ~~p~~~~~~ 120 (126)
T cd03183 112 GNPLFDEAH 120 (126)
T ss_pred cchhHHHHH
Confidence 89998743
No 20
>cd03182 GST_C_GTT2_like GST_C family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensiti
Probab=99.49 E-value=1.6e-13 Score=86.59 Aligned_cols=74 Identities=15% Similarity=0.271 Sum_probs=62.3
Q ss_pred hHHHHHHHHHHHHHHHHhhhcccCCCceeccCCCchHHHHHHHHHHHHHHHHHHhcCcccCCCCCchHHHHHHHhhcccc
Q 045128 12 GQDLENAVKAALEMLQTVEKHGLGEKKFFNGDNIGLADLAFGAIAYWLQVLEDVMGVKLFESHKFPSWHEWFENSRKVPV 91 (117)
Q Consensus 12 ~~~~~~~~~~l~~~l~~l~e~~L~~~~~~~Gd~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~~~~~~p~ 91 (117)
++..++..+++.+.|+.+ |+.|++++|++||++|+|||++++.+.|+.. .+.++ ...+|+|.+|++++.++|+
T Consensus 44 ~~~~~~~~~~l~~~l~~l-e~~L~~~~~l~gd~~t~aDi~l~~~~~~~~~----~~~~~--~~~~p~l~~w~~~~~~~p~ 116 (117)
T cd03182 44 PEWGERSKARAADFLAYL-DTRLAGSPYVAGDRFTIADITAFVGLDFAKV----VKLRV--PEELTHLRAWYDRMAARPS 116 (117)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHhcCCCcccCCCCCHHHHHHHHHhHHHHh----cCCCC--ccccHHHHHHHHHHHhccC
Confidence 445677888899999999 9999888999999999999999999987643 34433 2589999999999999997
Q ss_pred c
Q 045128 92 I 92 (117)
Q Consensus 92 ~ 92 (117)
+
T Consensus 117 ~ 117 (117)
T cd03182 117 A 117 (117)
T ss_pred C
Confidence 5
No 21
>cd03204 GST_C_GDAP1 GST_C family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells. More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal thioredoxin-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.
Probab=99.48 E-value=2.3e-13 Score=86.28 Aligned_cols=76 Identities=21% Similarity=0.332 Sum_probs=60.9
Q ss_pred hHHHHHHHHHHHHHHHHhhhcccCCC----------ceeccCCCchHHHHHHHHHHHHHHHHHHhcCccc--CCCCCchH
Q 045128 12 GQDLENAVKAALEMLQTVEKHGLGEK----------KFFNGDNIGLADLAFGAIAYWLQVLEDVMGVKLF--ESHKFPSW 79 (117)
Q Consensus 12 ~~~~~~~~~~l~~~l~~l~e~~L~~~----------~~~~Gd~~t~aDi~l~~~~~~~~~~~~~~~~~~~--~~~~~P~l 79 (117)
.+.+++..+++...|+.+ |+.|.++ +|++|+++|+|||++++.+.|+.. .+.+.. ....+|+|
T Consensus 24 ~~~i~~~~~~l~~~l~~L-E~~L~~~~~~~~~~~~~~yL~Gd~~TlADi~l~~~l~~~~~----~~~~~~~~~~~~~P~l 98 (111)
T cd03204 24 VEYLKKILDELEMVLDQV-EQELQRRKEETEEQKCQLWLCGDTFTLADISLGVTLHRLKF----LGLSRRYWGNGKRPNL 98 (111)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHcCCcccccccCCCccCCCCCCHHHHHHHHHHHHHHH----cCccccccccccChHH
Confidence 445678889999999999 9988654 499999999999999999988753 232220 02579999
Q ss_pred HHHHHHhhccccc
Q 045128 80 HEWFENSRKVPVI 92 (117)
Q Consensus 80 ~~w~~~~~~~p~~ 92 (117)
.+|+++|.+||++
T Consensus 99 ~~w~~rv~aRpsf 111 (111)
T cd03204 99 EAYFERVLQRESF 111 (111)
T ss_pred HHHHHHHHcCCCC
Confidence 9999999999985
No 22
>cd03180 GST_C_2 GST_C family, unknown subfamily 2; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.47 E-value=3.3e-13 Score=84.09 Aligned_cols=70 Identities=23% Similarity=0.603 Sum_probs=57.6
Q ss_pred HHHHHHHHHHHHHHHhhhcccCCCceeccCCCchHHHHHHHHHH-HHHHHHHHhcCcccCCCCCchHHHHHHHhhccccc
Q 045128 14 DLENAVKAALEMLQTVEKHGLGEKKFFNGDNIGLADLAFGAIAY-WLQVLEDVMGVKLFESHKFPSWHEWFENSRKVPVI 92 (117)
Q Consensus 14 ~~~~~~~~l~~~l~~l~e~~L~~~~~~~Gd~~t~aDi~l~~~~~-~~~~~~~~~~~~~~~~~~~P~l~~w~~~~~~~p~~ 92 (117)
..+...+++.+.|+.+ |+.|++++|++|+++|+|||++++++. |.. .+. ..+.+|+|.+|.++|.++|++
T Consensus 40 ~~~~~~~~~~~~l~~l-E~~L~~~~~l~g~~~t~aDi~~~~~~~~~~~-----~~~---~~~~~p~l~~~~~~~~~~p~~ 110 (110)
T cd03180 40 AIAASLAAWAKLMAIL-DAQLAGRPYLAGDRFTLADIPLGCSAYRWFE-----LPI---ERPPLPHLERWYARLRARPAF 110 (110)
T ss_pred HHHHHHHHHHHHHHHH-HHHhCCCCcccCCCCCHHHHHHHHHHHHHHH-----ccc---ccccCchHHHHHHHHHhCCCC
Confidence 3456778899999999 999988899999999999999998774 431 121 236899999999999999975
No 23
>cd03206 GST_C_7 GST_C family, unknown subfamily 7; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.47 E-value=3.5e-13 Score=83.31 Aligned_cols=73 Identities=22% Similarity=0.387 Sum_probs=60.4
Q ss_pred hHHHHHHHHHHHHHHHHhhhcccCCCceeccCCCchHHHHHHHHHHHHHHHHHHhcCcccCCCCCchHHHHHHHhhcccc
Q 045128 12 GQDLENAVKAALEMLQTVEKHGLGEKKFFNGDNIGLADLAFGAIAYWLQVLEDVMGVKLFESHKFPSWHEWFENSRKVPV 91 (117)
Q Consensus 12 ~~~~~~~~~~l~~~l~~l~e~~L~~~~~~~Gd~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~~~~~~p~ 91 (117)
+...++...++.+.+..+ |+.|++++|++|+++|+|||++++++.+... .+. ..+.+|+|.+|+++|.++|+
T Consensus 28 ~~~~~~~~~~~~~~l~~l-e~~L~~~~~l~G~~~t~aDi~~~~~~~~~~~----~~~---~~~~~p~l~~~~~~~~~~p~ 99 (100)
T cd03206 28 PLDKETAIARAHRLLRLL-EEHLAGRDWLAGDRPTIADVAVYPYVALAPE----GGV---DLEDYPAIRRWLARIEALPG 99 (100)
T ss_pred HhHHHHHHHHHHHHHHHH-HHHHccCCccCCCCCCHHHHHHHHHHHHHhc----cCC---ChhhCcHHHHHHHHHHhCcC
Confidence 345677888999999999 9999989999999999999999888766422 122 23689999999999999997
Q ss_pred c
Q 045128 92 I 92 (117)
Q Consensus 92 ~ 92 (117)
+
T Consensus 100 ~ 100 (100)
T cd03206 100 F 100 (100)
T ss_pred C
Confidence 5
No 24
>cd03210 GST_C_Pi GST_C family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an incre
Probab=99.46 E-value=2e-13 Score=87.96 Aligned_cols=77 Identities=23% Similarity=0.307 Sum_probs=62.3
Q ss_pred HHHHHHHHHHHHHHHhhhcccCC---CceeccCCCchHHHHHHHHHHHHHHHHHHhcCcccCCCCCchHHHHHHHhhccc
Q 045128 14 DLENAVKAALEMLQTVEKHGLGE---KKFFNGDNIGLADLAFGAIAYWLQVLEDVMGVKLFESHKFPSWHEWFENSRKVP 90 (117)
Q Consensus 14 ~~~~~~~~l~~~l~~l~e~~L~~---~~~~~Gd~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~~~~~~p 90 (117)
..+...+++.+.|..+ |+.|++ ++|++|+++|+||+++++++.|+... +...+ +.+|+|.+|+++|.++|
T Consensus 32 ~~~~~~~~~~~~l~~l-e~~L~~~~~~~~l~G~~~T~ADi~l~~~~~~~~~~----~~~~~--~~~P~l~~~~~rv~~~p 104 (126)
T cd03210 32 GKDDYIKDLPEQLKPF-EKLLSKNNGKGFIVGDKISFADYNLFDLLDIHLVL----APGCL--DAFPLLKAFVERLSARP 104 (126)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHhCCCCCeeeCCCccHHHHHHHHHHHHHHHh----ChHhh--hcChHHHHHHHHHHhCc
Confidence 3455667788999999 999863 58999999999999999998887431 11222 58999999999999999
Q ss_pred cchhcCC
Q 045128 91 VIEENLP 97 (117)
Q Consensus 91 ~~~~~~~ 97 (117)
+++++..
T Consensus 105 ~v~~~~~ 111 (126)
T cd03210 105 KLKAYLE 111 (126)
T ss_pred HHHHHHh
Confidence 9998765
No 25
>PF13410 GST_C_2: Glutathione S-transferase, C-terminal domain; PDB: 4DEJ_H 3IC8_A 2JL4_A 2V6K_B 3CBU_B 1JLW_B 3F6D_B 3G7I_A 3F63_A 3G7J_B ....
Probab=99.46 E-value=1.9e-13 Score=79.13 Aligned_cols=68 Identities=24% Similarity=0.468 Sum_probs=54.8
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCCCceeccCCCchHHHHHHHHHHHHHHHHHHhcCcccCCCCCchHHHHHHH
Q 045128 13 QDLENAVKAALEMLQTVEKHGLGEKKFFNGDNIGLADLAFGAIAYWLQVLEDVMGVKLFESHKFPSWHEWFEN 85 (117)
Q Consensus 13 ~~~~~~~~~l~~~l~~l~e~~L~~~~~~~Gd~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~~ 85 (117)
..++.+.+++.+.|+.+ |+.|++++|+.|+++|+||+++++.+.++..... +.+. .+.+|+|.+|++|
T Consensus 2 ~~~~~~~~~~~~~l~~l-e~~L~~~~fl~G~~~s~aD~~l~~~l~~~~~~~~--~~~~--~~~~p~l~~w~~r 69 (69)
T PF13410_consen 2 AAVERARAQLEAALDAL-EDHLADGPFLFGDRPSLADIALAPFLWRLRFVGP--DFDL--LEAYPNLRAWYER 69 (69)
T ss_dssp HHHHHHHHHHHHHHHHH-HHHHTTSSBTTBSS--HHHHHHHHHHHHHHHCTH--TCCH--HTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH-HHHHhhCCCCCCCCCCHHHHHHHHHHHHHHHhCc--CcCc--cccCHHHHHHHhC
Confidence 56788999999999999 9999999999999999999999999988865311 1222 2789999999986
No 26
>cd03189 GST_C_GTT1_like GST_C family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endopl
Probab=99.46 E-value=3.4e-13 Score=85.45 Aligned_cols=68 Identities=19% Similarity=0.227 Sum_probs=56.7
Q ss_pred HHHHHHHHHHHHHHhhhcccCCCceeccCCCchHHHHHHHHHHHHHHHHHHhcCcccCCCCCchHHHHHHHhhccc
Q 045128 15 LENAVKAALEMLQTVEKHGLGEKKFFNGDNIGLADLAFGAIAYWLQVLEDVMGVKLFESHKFPSWHEWFENSRKVP 90 (117)
Q Consensus 15 ~~~~~~~l~~~l~~l~e~~L~~~~~~~Gd~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~~~~~~p 90 (117)
.+....++.+.|+.+ |+.|++++|++||++|+|||++++.+.|+.. .+. ....+|+|.+|++++.++|
T Consensus 52 ~~~~~~~~~~~l~~l-e~~L~~~~~l~Gd~~t~ADi~l~~~~~~~~~----~~~---~~~~~p~l~~w~~~~~~~p 119 (119)
T cd03189 52 AGFINPELKKHLDFL-EDRLAKKGYFVGDKLTAADIMMSFPLEAALA----RGP---LLEKYPNIAAYLERIEARP 119 (119)
T ss_pred HHHHhHHHHHHHHHH-HHHHccCCCCCCCCCCHHHHHHHHHHHHHHH----cCc---ccccCchHHHHHHHHhcCC
Confidence 344566789999999 9999989999999999999999998888743 222 2368999999999999987
No 27
>cd03177 GST_C_Delta_Epsilon GST_C family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites th
Probab=99.45 E-value=3.6e-13 Score=85.51 Aligned_cols=77 Identities=23% Similarity=0.392 Sum_probs=64.1
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCCCceeccCCCchHHHHHHHHHHHHHHHHHHhcCcccCCCCCchHHHHHHHhhccccc
Q 045128 13 QDLENAVKAALEMLQTVEKHGLGEKKFFNGDNIGLADLAFGAIAYWLQVLEDVMGVKLFESHKFPSWHEWFENSRKVPVI 92 (117)
Q Consensus 13 ~~~~~~~~~l~~~l~~l~e~~L~~~~~~~Gd~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~~~~~~p~~ 92 (117)
+..+...+++.+.|+.+ |+.|++++|++|+++|+|||++++++.|+.. ..+.+ ...+|+|.+|+++|.++|++
T Consensus 34 ~~~~~~~~~~~~~l~~l-e~~L~~~~~l~G~~~s~aDi~l~~~~~~~~~---~~~~~---~~~~p~l~~w~~~~~~~p~~ 106 (118)
T cd03177 34 EPPEEKLDKLEEALDFL-ETFLEGSDYVAGDQLTIADLSLVATVSTLEA---LLPLD---LSKYPNVRAWLERLKALPPY 106 (118)
T ss_pred CCCHHHHHHHHHHHHHH-HHHHccCCeeCCCCcCHHHHHHHHHHHHHHH---hcCCC---hhhCchHHHHHHHHHcccch
Confidence 44566778899999999 9999888999999999999999999988742 12322 25799999999999999999
Q ss_pred hhcC
Q 045128 93 EENL 96 (117)
Q Consensus 93 ~~~~ 96 (117)
++..
T Consensus 107 ~~~~ 110 (118)
T cd03177 107 EEAN 110 (118)
T ss_pred HHHH
Confidence 9854
No 28
>cd03181 GST_C_EFB1gamma GST_C family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role
Probab=99.45 E-value=2.2e-13 Score=86.68 Aligned_cols=82 Identities=17% Similarity=0.333 Sum_probs=66.0
Q ss_pred hHHHHHHHHHHHHHHHHhhhcccCCCceeccCCCchHHHHHHHHHHHHHHHHHHhcCcccCCCCCchHHHHHHHhhcccc
Q 045128 12 GQDLENAVKAALEMLQTVEKHGLGEKKFFNGDNIGLADLAFGAIAYWLQVLEDVMGVKLFESHKFPSWHEWFENSRKVPV 91 (117)
Q Consensus 12 ~~~~~~~~~~l~~~l~~l~e~~L~~~~~~~Gd~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~~~~~~p~ 91 (117)
....+...+.+.+.|+.+ |+.|+.++|++|+++|+|||++++++.++... ..+...+ ..+|++.+|.+++.++|+
T Consensus 35 ~~~~~~~~~~~~~~l~~l-e~~l~~~~~l~G~~~siaDi~l~~~~~~~~~~--~~~~~~~--~~~p~l~~w~~~~~~~p~ 109 (123)
T cd03181 35 KKSVEAALEELDRVLGVL-EERLLKRTYLVGERLTLADIFVAGALLLGFTY--VFDKEWR--AKYPNVTRWFNTVVNQPI 109 (123)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHccCceeccCCccHHHHHHHHHHHHHHHH--HcCHHHH--HhChHHHHHHHHHHcCHH
Confidence 345667788899999999 99998889999999999999999988876321 1111112 479999999999999999
Q ss_pred chhcCCC
Q 045128 92 IEENLPN 98 (117)
Q Consensus 92 ~~~~~~~ 98 (117)
+++++++
T Consensus 110 ~~~~~~~ 116 (123)
T cd03181 110 FKAVFGE 116 (123)
T ss_pred HHHHcCC
Confidence 9988764
No 29
>PLN02817 glutathione dehydrogenase (ascorbate)
Probab=99.44 E-value=9.4e-13 Score=94.84 Aligned_cols=88 Identities=18% Similarity=0.339 Sum_probs=69.9
Q ss_pred HHHHHHHHHHhhhcccCC-CceeccCCCchHHHHHHHHHHHHHHH-HHHhcCcccCCCCCchHHHHHHHhhccccchhcC
Q 045128 19 VKAALEMLQTVEKHGLGE-KKFFNGDNIGLADLAFGAIAYWLQVL-EDVMGVKLFESHKFPSWHEWFENSRKVPVIEENL 96 (117)
Q Consensus 19 ~~~l~~~l~~l~e~~L~~-~~~~~Gd~~t~aDi~l~~~~~~~~~~-~~~~~~~~~~~~~~P~l~~w~~~~~~~p~~~~~~ 96 (117)
.+++.+.|..+ |+.|++ ++|++|+++|+|||++++.+.++... ....++++ .+.+|+|.+|++++.++|+++.+.
T Consensus 173 ~~~l~~~l~~L-E~~L~~~g~yl~Gd~~SlADi~l~p~L~~l~~~~~~~~~~~i--~~~~P~L~~w~~ri~~rps~~~~~ 249 (265)
T PLN02817 173 EQALLDELTSF-DDYIKENGPFINGEKISAADLSLGPKLYHLEIALGHYKNWSV--PDSLPFVKSYMKNIFSMESFVKTR 249 (265)
T ss_pred HHHHHHHHHHH-HHHHhcCCCeeCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCc--cccCHHHHHHHHHHhcchhHhhcC
Confidence 45677889999 999874 69999999999999999988766432 11223333 368999999999999999999999
Q ss_pred CChhHHHHHHHHH
Q 045128 97 PNQHEMVIAFKRR 109 (117)
Q Consensus 97 ~~~~~~~~~~~~~ 109 (117)
+..+.+.+.++..
T Consensus 250 ~~~~~~~~~~~~~ 262 (265)
T PLN02817 250 ALPEDVIAGWRPK 262 (265)
T ss_pred CCHHHHHHHhHhh
Confidence 9888877777643
No 30
>PLN02378 glutathione S-transferase DHAR1
Probab=99.42 E-value=8e-13 Score=92.10 Aligned_cols=88 Identities=18% Similarity=0.348 Sum_probs=67.4
Q ss_pred HHHHHHHHHHHHHhhhcccC--CCceeccCCCchHHHHHHHHHHHHHHHHH-HhcCcccCCCCCchHHHHHHHhhccccc
Q 045128 16 ENAVKAALEMLQTVEKHGLG--EKKFFNGDNIGLADLAFGAIAYWLQVLED-VMGVKLFESHKFPSWHEWFENSRKVPVI 92 (117)
Q Consensus 16 ~~~~~~l~~~l~~l~e~~L~--~~~~~~Gd~~t~aDi~l~~~~~~~~~~~~-~~~~~~~~~~~~P~l~~w~~~~~~~p~~ 92 (117)
+...+.+.+.|+.+ |+.|+ +++|++||++|+||+++++.+.++..... ..+++. .+.+|+|.+|+++|.++|++
T Consensus 117 ~~~~~~~~~~l~~l-e~~L~~~~~~fl~Gd~~T~ADi~l~~~~~~l~~~~~~~~~~~~--~~~~p~l~~w~~~~~~rpa~ 193 (213)
T PLN02378 117 DGSEHALLVELEAL-ENHLKSHDGPFIAGERVSAVDLSLAPKLYHLQVALGHFKSWSV--PESFPHVHNYMKTLFSLDSF 193 (213)
T ss_pred hHHHHHHHHHHHHH-HHHHhcCCCCCcCCCCCchhhHHHHHHHHHHHHHHHHhcCCCc--hhHhHHHHHHHHHHhcCCCe
Confidence 34556778889999 99997 46899999999999999999877643211 122222 26899999999999999999
Q ss_pred hhcCCChhHHHHHH
Q 045128 93 EENLPNQHEMVIAF 106 (117)
Q Consensus 93 ~~~~~~~~~~~~~~ 106 (117)
+++++.....+..+
T Consensus 194 ~~~~~~~~~~~~~~ 207 (213)
T PLN02378 194 EKTKTEEKYVISGW 207 (213)
T ss_pred ecccCChHHHHHHH
Confidence 99888766555443
No 31
>cd03208 GST_C_Alpha GST_C family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Alpha subfamily is composed of vertebrate GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GS
Probab=99.42 E-value=8.1e-13 Score=86.51 Aligned_cols=70 Identities=19% Similarity=0.308 Sum_probs=57.4
Q ss_pred HHHHHHHHhhhcccC--CCceeccCCCchHHHHHHHHHHHHHHHHHHhcCcccCCCCCchHHHHHHHhhccccchhcCC
Q 045128 21 AALEMLQTVEKHGLG--EKKFFNGDNIGLADLAFGAIAYWLQVLEDVMGVKLFESHKFPSWHEWFENSRKVPVIEENLP 97 (117)
Q Consensus 21 ~l~~~l~~l~e~~L~--~~~~~~Gd~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~~~~~~p~~~~~~~ 97 (117)
.+.+.|..+ |+.|+ +++|++|+++|+||+++++++.|+... ....+ ..+|+|.+|++++.++|++++++.
T Consensus 43 ~~~~~l~~l-E~~L~~~~~~~l~G~~~T~ADi~l~~~l~~~~~~----~~~~l--~~~P~l~~~~~rv~~~P~vk~~~~ 114 (137)
T cd03208 43 AKNRYFPVF-EKVLKSHGQDFLVGNKLSRADIHLLEAILMVEEL----DPSLL--SDFPLLQAFKTRISNLPTIKKFLQ 114 (137)
T ss_pred HHHHHHHHH-HHHHHhCCCCeeeCCCCCHHHHHHHHHHHHHHHh----chhhh--ccChHHHHHHHHHHcCHHHHHHHh
Confidence 446789999 99997 678999999999999999998887431 22222 589999999999999999998664
No 32
>PRK10542 glutathionine S-transferase; Provisional
Probab=99.38 E-value=1.3e-12 Score=89.59 Aligned_cols=74 Identities=12% Similarity=0.249 Sum_probs=61.8
Q ss_pred HHHHHHHHHHHHHhhhcccCCCceeccCCCchHHHHHHHHHHHHHHHHHHhcCcccCCCCCchHHHHHHHhhccccchhc
Q 045128 16 ENAVKAALEMLQTVEKHGLGEKKFFNGDNIGLADLAFGAIAYWLQVLEDVMGVKLFESHKFPSWHEWFENSRKVPVIEEN 95 (117)
Q Consensus 16 ~~~~~~l~~~l~~l~e~~L~~~~~~~Gd~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~~~~~~p~~~~~ 95 (117)
+...+.+.+.|+.+ |+.|++++|++|+++|+|||++++++.|... .+.+ .+.+|+|.+|++++.++|+++++
T Consensus 123 ~~~~~~~~~~l~~l-e~~L~~~~~l~G~~~s~ADi~l~~~~~~~~~----~~~~---~~~~p~l~~w~~~~~~~p~~k~~ 194 (201)
T PRK10542 123 PTVRAQLEKKFQYV-DEALADEQWICGQRFTIADAYLFTVLRWAYA----VKLN---LEGLEHIAAYMQRVAERPAVAAA 194 (201)
T ss_pred HHHHHHHHHHHHHH-HHHhcCCCeeeCCCCcHHhHHHHHHHHHhhc----cCCC---cccchHHHHHHHHHHcCHHHHHH
Confidence 44567788999999 9999888999999999999999998877632 2332 25799999999999999999987
Q ss_pred CC
Q 045128 96 LP 97 (117)
Q Consensus 96 ~~ 97 (117)
+.
T Consensus 195 ~~ 196 (201)
T PRK10542 195 LK 196 (201)
T ss_pred HH
Confidence 54
No 33
>PRK13972 GSH-dependent disulfide bond oxidoreductase; Provisional
Probab=99.38 E-value=1.2e-12 Score=90.96 Aligned_cols=76 Identities=18% Similarity=0.385 Sum_probs=60.6
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCCCceeccCCCchHHHHHHHHHH-HHHHHHHHhcCcccCCCCCchHHHHHHHhhcccc
Q 045128 13 QDLENAVKAALEMLQTVEKHGLGEKKFFNGDNIGLADLAFGAIAY-WLQVLEDVMGVKLFESHKFPSWHEWFENSRKVPV 91 (117)
Q Consensus 13 ~~~~~~~~~l~~~l~~l~e~~L~~~~~~~Gd~~t~aDi~l~~~~~-~~~~~~~~~~~~~~~~~~~P~l~~w~~~~~~~p~ 91 (117)
...+...+.+.+.+..+ |+.|++++|++||++|+|||++++++. |.. .+.+ .+.||+|.+|+++|.+||+
T Consensus 128 ~~~~~~~~~~~~~l~~l-e~~L~~~~~l~Gd~~t~ADi~l~~~~~~~~~-----~~~~---~~~~P~l~~w~~r~~~rp~ 198 (215)
T PRK13972 128 YAIERYQVETQRLYHVL-NKRLENSPWLGGENYSIADIACWPWVNAWTR-----QRID---LAMYPAVKNWHERIRSRPA 198 (215)
T ss_pred hHHHHHHHHHHHHHHHH-HHHhccCccccCCCCCHHHHHHHHHHHHHhh-----cCCc---chhCHHHHHHHHHHHhCHH
Confidence 34455667788899999 999988899999999999999888663 331 1222 3689999999999999999
Q ss_pred chhcCC
Q 045128 92 IEENLP 97 (117)
Q Consensus 92 ~~~~~~ 97 (117)
++++..
T Consensus 199 ~~~~~~ 204 (215)
T PRK13972 199 TGQALL 204 (215)
T ss_pred HHHHHH
Confidence 987653
No 34
>TIGR01262 maiA maleylacetoacetate isomerase. Maleylacetoacetate isomerase is an enzyme of tyrosine and phenylalanine catabolism. It requires glutathione and belongs by homology to the zeta family of glutathione S-transferases. The enzyme (EC 5.2.1.2) is described as active also on maleylpyruvate, and the example from a Ralstonia sp. catabolic plasmid is described as a maleylpyruvate isomerase involved in gentisate catabolism.
Probab=99.36 E-value=2.9e-12 Score=88.47 Aligned_cols=73 Identities=19% Similarity=0.239 Sum_probs=60.3
Q ss_pred HHHHHHHHHHHhhhcccCC--CceeccCCCchHHHHHHHHHHHHHHHHHHhcCcccCCCCCchHHHHHHHhhccccchhc
Q 045128 18 AVKAALEMLQTVEKHGLGE--KKFFNGDNIGLADLAFGAIAYWLQVLEDVMGVKLFESHKFPSWHEWFENSRKVPVIEEN 95 (117)
Q Consensus 18 ~~~~l~~~l~~l~e~~L~~--~~~~~Gd~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~~~~~~p~~~~~ 95 (117)
..+.+.+.|+.+ |+.|++ ++|++|+++|+||+++++++.++.. .+.. .+.||+|.+|+++|.++|+++++
T Consensus 130 ~~~~~~~~l~~l-e~~L~~~~~~~l~G~~~T~ADi~~~~~l~~~~~----~~~~---~~~~p~l~~~~~~~~~rp~~~~~ 201 (210)
T TIGR01262 130 YQHWISKGFAAL-EALLQPHAGAFCVGDTPTLADLCLVPQVYNAER----FGVD---LTPYPTLRRIAAALAALPAFQRA 201 (210)
T ss_pred HHHHHHHHHHHH-HHHHhcCCCCEeeCCCCCHHHHHHHHHHHHHHH----cCCC---cccchHHHHHHHHHhcCHHHHHh
Confidence 455688999999 999975 4699999999999999999877642 2222 26899999999999999999998
Q ss_pred CCC
Q 045128 96 LPN 98 (117)
Q Consensus 96 ~~~ 98 (117)
.++
T Consensus 202 ~~~ 204 (210)
T TIGR01262 202 HPE 204 (210)
T ss_pred Ccc
Confidence 764
No 35
>PLN02473 glutathione S-transferase
Probab=99.36 E-value=1.3e-12 Score=90.62 Aligned_cols=78 Identities=15% Similarity=0.264 Sum_probs=61.5
Q ss_pred HHHHHHHHHHHHHHhhhcccCCCceeccCCCchHHHHHHHHHHHHHHHHHHhcCcccCCCCCchHHHHHHHhhccccchh
Q 045128 15 LENAVKAALEMLQTVEKHGLGEKKFFNGDNIGLADLAFGAIAYWLQVLEDVMGVKLFESHKFPSWHEWFENSRKVPVIEE 94 (117)
Q Consensus 15 ~~~~~~~l~~~l~~l~e~~L~~~~~~~Gd~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~~~~~~p~~~~ 94 (117)
.+...+++.+.++.+ |+.|++++|++||++|+||+++++.+.|........ +.+ +++|+|.+|++++.++|++++
T Consensus 133 ~~~~~~~~~~~l~~l-e~~L~~~~~l~Gd~~t~ADi~~~~~~~~~~~~~~~~--~~~--~~~P~l~~w~~~~~~~p~~~~ 207 (214)
T PLN02473 133 VEELKVKFDKVLDVY-ENRLATNRYLGGDEFTLADLTHMPGMRYIMNETSLS--GLV--TSRENLNRWWNEISARPAWKK 207 (214)
T ss_pred HHHHHHHHHHHHHHH-HHHhccCCcccCCCCCHHHHHHHHHHHHHHhccccH--HHH--hcCHHHHHHHHHHhcChhhHH
Confidence 445567788899999 999988899999999999999999887753210101 112 589999999999999999998
Q ss_pred cCC
Q 045128 95 NLP 97 (117)
Q Consensus 95 ~~~ 97 (117)
+..
T Consensus 208 ~~~ 210 (214)
T PLN02473 208 LME 210 (214)
T ss_pred HHH
Confidence 653
No 36
>PRK11752 putative S-transferase; Provisional
Probab=99.36 E-value=1.9e-12 Score=93.08 Aligned_cols=82 Identities=15% Similarity=0.224 Sum_probs=62.1
Q ss_pred HHHHHHHHHHHHHHhhhcccCCCceeccCCCchHHHHHHHHHHHHHHHHHHhcCcccCCCCCchHHHHHHHhhccccchh
Q 045128 15 LENAVKAALEMLQTVEKHGLGEKKFFNGDNIGLADLAFGAIAYWLQVLEDVMGVKLFESHKFPSWHEWFENSRKVPVIEE 94 (117)
Q Consensus 15 ~~~~~~~l~~~l~~l~e~~L~~~~~~~Gd~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~~~~~~p~~~~ 94 (117)
.+...+++.+.|+.+ |+.|++++||+|+++|+|||++++++.++.........+..+.+.||+|.+|+++|.++|++++
T Consensus 176 ~~~~~~~~~~~L~~l-e~~L~~~~fl~Gd~~TlADi~l~~~l~~l~~~~~~~~~~~~~~~~~P~L~~w~~rv~~rPs~k~ 254 (264)
T PRK11752 176 INRFTMEAKRQLDVL-DKQLAEHEYIAGDEYTIADIAIWPWYGNLVLGNLYDAAEFLDVGSYKHVQRWAKEIAERPAVKR 254 (264)
T ss_pred HHHHHHHHHHHHHHH-HHHhccCCCCCCCccCHHHHHHHHHHHHHhhccccccccccCcccCHHHHHHHHHHHhCHHHHH
Confidence 344556788899999 9999888999999999999999988766532100001111223689999999999999999998
Q ss_pred cCC
Q 045128 95 NLP 97 (117)
Q Consensus 95 ~~~ 97 (117)
+..
T Consensus 255 ~~~ 257 (264)
T PRK11752 255 GRI 257 (264)
T ss_pred HHh
Confidence 664
No 37
>PRK10357 putative glutathione S-transferase; Provisional
Probab=99.34 E-value=6.6e-12 Score=86.35 Aligned_cols=79 Identities=15% Similarity=0.142 Sum_probs=63.0
Q ss_pred HHHHHHHHHHHHHHhhhcccCCCceeccCCCchHHHHHHHHHHHHHHHHHHhcCcccCCCCCchHHHHHHHhhccccchh
Q 045128 15 LENAVKAALEMLQTVEKHGLGEKKFFNGDNIGLADLAFGAIAYWLQVLEDVMGVKLFESHKFPSWHEWFENSRKVPVIEE 94 (117)
Q Consensus 15 ~~~~~~~l~~~l~~l~e~~L~~~~~~~Gd~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~~~~~~p~~~~ 94 (117)
.+...+.+.+.|..+ |+.|++++ ++||++|+|||++++.+.|+... . .+... ..++|+|.+|++++.+||++++
T Consensus 123 ~~~~~~~l~~~l~~l-e~~L~~~~-l~Gd~~t~ADi~l~~~l~~~~~~-~-~~~~~--~~~~p~l~~~~~~i~~rp~~~~ 196 (202)
T PRK10357 123 LLRQREKINRSLDAL-EGYLVDGT-LKTDTVNLATIAIACAVGYLNFR-R-VAPGW--CVDRPHLVKLVENLFQRESFAR 196 (202)
T ss_pred HHHHHHHHHHHHHHH-HHhhccCc-ccCCCcCHHHHHHHHHHHHHHhc-c-cCcch--hhcChHHHHHHHHHhcChhhhh
Confidence 455667888999999 99998777 99999999999999998877431 0 01111 1579999999999999999999
Q ss_pred cCCCh
Q 045128 95 NLPNQ 99 (117)
Q Consensus 95 ~~~~~ 99 (117)
+.|+.
T Consensus 197 ~~~~~ 201 (202)
T PRK10357 197 TEPPK 201 (202)
T ss_pred cCCCC
Confidence 87753
No 38
>PLN02395 glutathione S-transferase
Probab=99.34 E-value=3.3e-12 Score=88.53 Aligned_cols=80 Identities=20% Similarity=0.320 Sum_probs=62.3
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCCCceeccCCCchHHHHHHHHHHHHHHHHHHhcCcccCCCCCchHHHHHHHhhccccc
Q 045128 13 QDLENAVKAALEMLQTVEKHGLGEKKFFNGDNIGLADLAFGAIAYWLQVLEDVMGVKLFESHKFPSWHEWFENSRKVPVI 92 (117)
Q Consensus 13 ~~~~~~~~~l~~~l~~l~e~~L~~~~~~~Gd~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~~~~~~p~~ 92 (117)
+..+...+++.+.++.+ |+.|++++|++|+++|+||+++++++.++.. ..+... ....+|+|.+|++++.++|++
T Consensus 130 ~~~~~~~~~~~~~l~~l-e~~L~~~~~l~G~~~s~ADi~l~~~~~~~~~---~~~~~~-~~~~~p~L~~w~~~~~~rp~~ 204 (215)
T PLN02395 130 KVIKESEEKLAKVLDVY-EARLSKSKYLAGDFVSLADLAHLPFTEYLVG---PIGKAY-LIKDRKHVSAWWDDISSRPAW 204 (215)
T ss_pred HHHHHHHHHHHHHHHHH-HHHhcCCccccCCCcCHHHHHHHHHHHHHhc---ccchhh-hhccCchHHHHHHHHHcChHH
Confidence 33456677788999999 9999888999999999999999887766521 011111 125799999999999999999
Q ss_pred hhcCC
Q 045128 93 EENLP 97 (117)
Q Consensus 93 ~~~~~ 97 (117)
++++.
T Consensus 205 k~~~~ 209 (215)
T PLN02395 205 KEVLA 209 (215)
T ss_pred HHHHH
Confidence 98754
No 39
>cd03195 GST_C_4 GST_C family, unknown subfamily 4; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.33 E-value=4e-12 Score=80.65 Aligned_cols=72 Identities=17% Similarity=0.145 Sum_probs=59.8
Q ss_pred HHHHHHHHHHHHHHHhhhcccC-CCceeccCCCchHHHHHHHHHHHHHHHHHHhcCcccCCCCCchHHHHHHHhhccccc
Q 045128 14 DLENAVKAALEMLQTVEKHGLG-EKKFFNGDNIGLADLAFGAIAYWLQVLEDVMGVKLFESHKFPSWHEWFENSRKVPVI 92 (117)
Q Consensus 14 ~~~~~~~~l~~~l~~l~e~~L~-~~~~~~Gd~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~~~~~~p~~ 92 (117)
..+.+.+++.+.+..+ |..+. +++|++| ++|+||+++++++.|+.. .|.++ . |++.+|.+||.+||++
T Consensus 39 ~~~~~~~~~~~~~~~l-e~~l~~~~~~l~G-~fSiAD~~l~~~~~~~~~----~g~~l---~--p~l~ay~~r~~~rPa~ 107 (114)
T cd03195 39 LSEAAQAAAEKLIAVA-EALLPPGAANLFG-EWCIADTDLALMLNRLVL----NGDPV---P--ERLRDYARRQWQRPSV 107 (114)
T ss_pred CCHHHHHHHHHHHHHH-HHHHhcCCCcccC-CccHHHHHHHHHHHHHHH----cCCCC---C--HHHHHHHHHHHCCHHH
Confidence 4466788888889999 88885 4589999 599999999999998854 35543 2 9999999999999999
Q ss_pred hhcC
Q 045128 93 EENL 96 (117)
Q Consensus 93 ~~~~ 96 (117)
+++.
T Consensus 108 ~~~~ 111 (114)
T cd03195 108 QAWL 111 (114)
T ss_pred HHHH
Confidence 9865
No 40
>cd03179 GST_C_1 GST_C family, unknown subfamily 1; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.31 E-value=7.2e-12 Score=77.45 Aligned_cols=68 Identities=19% Similarity=0.337 Sum_probs=56.2
Q ss_pred hHHHHHHHHHHHHHHHHhhhcccCCCceeccCCCchHHHHHHHHHHHHHHHHHHhcCcccCCCCCchHHHHHHHhh
Q 045128 12 GQDLENAVKAALEMLQTVEKHGLGEKKFFNGDNIGLADLAFGAIAYWLQVLEDVMGVKLFESHKFPSWHEWFENSR 87 (117)
Q Consensus 12 ~~~~~~~~~~l~~~l~~l~e~~L~~~~~~~Gd~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~~~~ 87 (117)
++..+...+++.+.++.+ |+.|++++|++|+++|+|||++++++.|+.. .+.+ ..++|+|.+|.++++
T Consensus 38 ~~~~~~~~~~~~~~l~~l-e~~L~~~~~l~g~~~slaDi~~~~~~~~~~~----~~~~---~~~~p~l~~~~~~~~ 105 (105)
T cd03179 38 AEVLAFLRERGHAALAVL-EAHLAGRDFLVGDALTIADIALAAYTHVADE----GGFD---LADYPAIRAWLARIE 105 (105)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHccCccccCCCCCHHHHHHHHHHHhccc----cCCC---hHhCccHHHHHHhhC
Confidence 445677888899999999 9999888999999999999999999988642 2332 367999999999874
No 41
>cd03194 GST_C_3 GST_C family, unknown subfamily 3; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.30 E-value=1.1e-11 Score=78.71 Aligned_cols=68 Identities=15% Similarity=0.266 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHhhhcccCCCceeccCCCchHHHHHHHHHHHHHHHHHHhcCcccCCCCCchHHHHHHHhhccccchhcC
Q 045128 18 AVKAALEMLQTVEKHGLGEKKFFNGDNIGLADLAFGAIAYWLQVLEDVMGVKLFESHKFPSWHEWFENSRKVPVIEENL 96 (117)
Q Consensus 18 ~~~~l~~~l~~l~e~~L~~~~~~~Gd~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~~~~~~p~~~~~~ 96 (117)
...++.+.+..+ .+.+++++|++|| +|+||+++++++.|... .+.+ ..|+|.+|++++.++|++++++
T Consensus 45 ~~~~~~~~le~~-l~~~~~~~yl~Gd-~T~ADi~l~~~~~~~~~----~~~~-----~~P~l~~~~~rv~~rPsv~~~~ 112 (114)
T cd03194 45 DIARIEAIWAEC-LARFQGGPFLFGD-FSIADAFFAPVVTRFRT----YGLP-----LSPAAQAYVDALLAHPAMQEWI 112 (114)
T ss_pred HHHHHHHHHHHH-HHHcCCCCCCCCC-CcHHHHHHHHHHHHHHH----cCCC-----CCHHHHHHHHHHHCCHHHHHHH
Confidence 334444444444 3334467899999 99999999999888743 2322 2399999999999999998864
No 42
>PTZ00057 glutathione s-transferase; Provisional
Probab=99.30 E-value=4.8e-12 Score=87.61 Aligned_cols=76 Identities=20% Similarity=0.186 Sum_probs=59.9
Q ss_pred HHHHHHHHHHHHHhhhcccCCC--ceeccCCCchHHHHHHHHHHHHHHHHHHhcCcccCCCCCchHHHHHHHhhccccch
Q 045128 16 ENAVKAALEMLQTVEKHGLGEK--KFFNGDNIGLADLAFGAIAYWLQVLEDVMGVKLFESHKFPSWHEWFENSRKVPVIE 93 (117)
Q Consensus 16 ~~~~~~l~~~l~~l~e~~L~~~--~~~~Gd~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~~~~~~p~~~ 93 (117)
+...+.+.+.+..+ |+.|+++ +|++|+++|+||+++++++.++... .+.+ .+.||+|.+|.+++.++|+++
T Consensus 122 ~~~~~~~~~~l~~l-e~~L~~~~~~~l~Gd~~T~AD~~l~~~~~~~~~~---~~~~---l~~~P~l~~~~~r~~~~P~~k 194 (205)
T PTZ00057 122 TFLNEELPKWSGYF-ENILKKNHCNYFVGDNLTYADLAVFNLYDDIETK---YPNS---LKNFPLLKAHNEFISNLPNIK 194 (205)
T ss_pred HHHHHHHHHHHHHH-HHHHHhCCCCeeeCCcccHHHHHHHHHHHHHHHh---Chhh---hccChhHHHHHHHHHhChHHH
Confidence 33456778889999 9999643 7999999999999999888775321 1222 268999999999999999999
Q ss_pred hcCCC
Q 045128 94 ENLPN 98 (117)
Q Consensus 94 ~~~~~ 98 (117)
+++.+
T Consensus 195 ~y~~~ 199 (205)
T PTZ00057 195 NYISN 199 (205)
T ss_pred HHHHh
Confidence 87643
No 43
>cd03202 GST_C_etherase_LigE GST_C family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.30 E-value=9.2e-12 Score=80.15 Aligned_cols=68 Identities=21% Similarity=0.270 Sum_probs=56.2
Q ss_pred HHHHHHHHHHHHHHhhhcccCCCceeccCCCchHHHHHHHHHHHHHHHHHHhcCcccCCCCCchHHHHHHHhhc
Q 045128 15 LENAVKAALEMLQTVEKHGLGEKKFFNGDNIGLADLAFGAIAYWLQVLEDVMGVKLFESHKFPSWHEWFENSRK 88 (117)
Q Consensus 15 ~~~~~~~l~~~l~~l~e~~L~~~~~~~Gd~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~~~~~ 88 (117)
.+...+++.+.|+.+ |+.|++++|+.||++|+||+++++.+.|... ..+.++ .+.+|+|.+|++||.+
T Consensus 56 ~~~~~~~~~~~l~~l-~~~L~~~~fl~Gd~~t~AD~~l~~~l~~~~~---~~~~~~--~~~~p~l~~W~~r~~~ 123 (124)
T cd03202 56 REAALANFRAALEPL-RATLKGQPFLGGAAPNYADYIVFGGFQWARI---VSPFPL--LEEDDPVYDWFERCLD 123 (124)
T ss_pred hHHHHHHHHHHHHHH-HHHHcCCCccCCCCCchhHHHHHHHHHHHHH---cCcccc--cccCChHHHHHHHHhc
Confidence 356777889999999 9999989999999999999999998888753 123333 2689999999999976
No 44
>cd00299 GST_C_family Glutathione S-transferase (GST) family, C-terminal alpha helical domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an activ
Probab=99.26 E-value=3.3e-11 Score=73.21 Aligned_cols=70 Identities=24% Similarity=0.511 Sum_probs=57.0
Q ss_pred hHHHHHHHHHHHHHHHHhhhcccCCCceeccCCCchHHHHHHHHHHHHHHHHHHhcCcccCCCCCchHHHHHHHh
Q 045128 12 GQDLENAVKAALEMLQTVEKHGLGEKKFFNGDNIGLADLAFGAIAYWLQVLEDVMGVKLFESHKFPSWHEWFENS 86 (117)
Q Consensus 12 ~~~~~~~~~~l~~~l~~l~e~~L~~~~~~~Gd~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~~~ 86 (117)
++..+...+++.+.++.+ |+.|++++|++|+++|+||+++++++.|+.......+ + .+.+|++.+|.++|
T Consensus 31 ~~~~~~~~~~~~~~~~~l-~~~L~~~~~~~g~~~t~aDi~~~~~l~~~~~~~~~~~--~--~~~~p~l~~~~~~~ 100 (100)
T cd00299 31 EAALEEAREELAAALAAL-EKLLAGRPYLAGDRFSLADIALAPVLARLDLLGPLLG--L--LDEYPRLAAWYDRL 100 (100)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHccCCCCCCCCcCHHHHHHHHHHHHHHHhhhhhh--h--hccCccHHHHHHhC
Confidence 556677888899999999 9999988999999999999999999988864322111 1 25799999999875
No 45
>cd03193 GST_C_Metaxin GST_C family, Metaxin subfamily; composed of metaxins and related proteins. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities. Other members are the cadmium-inducible
Probab=99.22 E-value=4.3e-11 Score=72.32 Aligned_cols=70 Identities=23% Similarity=0.243 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHHHHhhhcccCCCceeccCCCchHHHHHHHHHHHHHHHHHHhcCc-c-cCCCCCchHHHHHHHhh
Q 045128 15 LENAVKAALEMLQTVEKHGLGEKKFFNGDNIGLADLAFGAIAYWLQVLEDVMGVK-L-FESHKFPSWHEWFENSR 87 (117)
Q Consensus 15 ~~~~~~~l~~~l~~l~e~~L~~~~~~~Gd~~t~aDi~l~~~~~~~~~~~~~~~~~-~-~~~~~~P~l~~w~~~~~ 87 (117)
..+..+++.+.++.+ |+.|++++|++|+++|+|||++++.+.++... . .+.. . .+.+.+|+|.+|++++.
T Consensus 17 ~~~~~~~~~~~l~~l-e~~L~~~~yl~Gd~~t~aDi~l~~~l~~~~~~-~-~~~~~~~~~~~~~p~l~~~~~r~~ 88 (88)
T cd03193 17 TREIYSLAKKDLKAL-SDLLGDKKFFFGDKPTSLDATVFGHLASILYA-P-LPNSALQLILKEYPNLVEYCERIR 88 (88)
T ss_pred HHHHHHHHHHHHHHH-HHHhCCCCccCCCCCCHHHHHHHHHHHHHHhc-C-CCChHHHHHHHhCcHHHHHHHHhC
Confidence 346677889999999 99999899999999999999999988776421 0 0100 0 01257999999999974
No 46
>COG0625 Gst Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.17 E-value=1.2e-10 Score=80.74 Aligned_cols=74 Identities=23% Similarity=0.498 Sum_probs=61.7
Q ss_pred hHHHHHHHHHHHHHHHHhhhcccCCCceeccCCCchHHHHHHHHHHHHHHHHHHhcCcccCCCCCchHHHHHHHhhcccc
Q 045128 12 GQDLENAVKAALEMLQTVEKHGLGEKKFFNGDNIGLADLAFGAIAYWLQVLEDVMGVKLFESHKFPSWHEWFENSRKVPV 91 (117)
Q Consensus 12 ~~~~~~~~~~l~~~l~~l~e~~L~~~~~~~Gd~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~~~~~~p~ 91 (117)
....+.....+...++.+ |+.|++++|++|+++|+||+++++.+.++.. .+.+. +.+|++.+|++++.++|+
T Consensus 126 ~~~~~~~~~~~~~~l~~l-e~~L~~~~~l~G~~~tiAD~~~~~~~~~~~~----~~~~~---~~~p~l~~w~~r~~~rp~ 197 (211)
T COG0625 126 EAALEAARAEIRALLALL-EALLADGPYLAGDRFTIADIALAPLLWRLAL----LGEEL---ADYPALKAWYERVLARPA 197 (211)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHhccCCcccCCCCCHHHHHHHHHHHHhhh----cCccc---ccChHHHHHHHHHHcCCc
Confidence 344566778899999999 9999989999999999999999999887643 23222 579999999999999999
Q ss_pred ch
Q 045128 92 IE 93 (117)
Q Consensus 92 ~~ 93 (117)
++
T Consensus 198 ~~ 199 (211)
T COG0625 198 FR 199 (211)
T ss_pred hh
Confidence 64
No 47
>cd03192 GST_C_Sigma_like GST_C family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi, and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition
Probab=99.16 E-value=8.8e-11 Score=72.69 Aligned_cols=69 Identities=25% Similarity=0.293 Sum_probs=53.8
Q ss_pred hHHHHHHHHHHHHHHHHhhhcccCC--CceeccCCCchHHHHHHHHHHHHHHHHHHhcCcccCCCCCchHHHHHHHh
Q 045128 12 GQDLENAVKAALEMLQTVEKHGLGE--KKFFNGDNIGLADLAFGAIAYWLQVLEDVMGVKLFESHKFPSWHEWFENS 86 (117)
Q Consensus 12 ~~~~~~~~~~l~~~l~~l~e~~L~~--~~~~~Gd~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~~~ 86 (117)
++..+...+.+.+.+..+ |+.|.+ ++|++|+++|+||+++++++.++... +.... ...+|+|.+|.+++
T Consensus 34 ~~~~~~~~~~~~~~l~~l-e~~l~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~----~~~~~-~~~~p~l~~~~~~~ 104 (104)
T cd03192 34 EKKKEFLKEAIPKYLKKL-EKILKENGGGYLVGDKLTWADLVVFDVLDYLLYL----DPKLL-LKKYPKLKALRERV 104 (104)
T ss_pred HHHHHHHHHhhHHHHHHH-HHHHHHcCCCeeeCCCccHHHHHHHHHHHHHHhh----Cchhh-HHhChhHHHHHHhC
Confidence 344555667788999999 999976 79999999999999999998887532 22110 25799999999875
No 48
>cd03200 GST_C_JTV1 GST_C family, JTV-1 subfamily; composed of uncharacterized proteins with similarity to the translation product of the human JTV-1 gene. Human JTV-1, a gene of unknown function, initiates within the human PMS2 gene promoter, but is transcribed from the opposite strand. PMS2 encodes a protein involved in DNA mismatch repair and is mutated in a subset of patients with hereditary nonpolyposis colon cancer. It is unknown whether the expression of JTV-1 affects that of PMS2, or vice versa, as a result of their juxtaposition. JTV-1 is up-regulated while PMS2 is down-regulated in tumor cell spheroids that show increased resistance to anticancer cytotoxic drugs compared with tumor cell monolayers indicating that suppressed DNA mismatch repair may be a mechanism for multicellular resistance to alkylating agents.
Probab=99.15 E-value=1.3e-10 Score=71.78 Aligned_cols=58 Identities=17% Similarity=0.338 Sum_probs=47.6
Q ss_pred HHHHHHHHHhhhcccCCCceeccCCCchHHHHHHHHHHHHHHHHHHhcCcccCCCCCchHHHHHHHhhc
Q 045128 20 KAALEMLQTVEKHGLGEKKFFNGDNIGLADLAFGAIAYWLQVLEDVMGVKLFESHKFPSWHEWFENSRK 88 (117)
Q Consensus 20 ~~l~~~l~~l~e~~L~~~~~~~Gd~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~~~~~ 88 (117)
+++.+.++.+ |+.|++++|++|+++|+|||++++.+.+. +.. .+.+|+|.+|+++|.+
T Consensus 38 ~~~~~~l~~l-e~~L~~~~fl~Gd~~tiADi~l~~~l~~~-------~~~---~~~~p~l~~w~~r~~~ 95 (96)
T cd03200 38 KEKAAVLRAL-NSALGRSPWLVGSEFTVADIVSWCALLQT-------GLA---SAAPANVQRWLKSCEN 95 (96)
T ss_pred HHHHHHHHHH-HHHHcCCCccCCCCCCHHHHHHHHHHHHc-------ccc---cccChHHHHHHHHHHh
Confidence 4566788899 99998899999999999999999877542 221 2579999999999976
No 49
>PRK10387 glutaredoxin 2; Provisional
Probab=99.13 E-value=1e-10 Score=80.68 Aligned_cols=67 Identities=13% Similarity=0.104 Sum_probs=55.4
Q ss_pred HHHHHHHHHHHHhhhcccCCCceeccCCCchHHHHHHHHHHHHHHHHHHhcCcccCCCCCchHHHHHHHhhccccch
Q 045128 17 NAVKAALEMLQTVEKHGLGEKKFFNGDNIGLADLAFGAIAYWLQVLEDVMGVKLFESHKFPSWHEWFENSRKVPVIE 93 (117)
Q Consensus 17 ~~~~~l~~~l~~l~e~~L~~~~~~~Gd~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~~~~~~p~~~ 93 (117)
...+++.+.|+.+ |+.|++ +|++||++|+||+++++++.|+... .+ + +.+|+|.+|++||.+||++.
T Consensus 142 ~~~~~~~~~l~~l-e~~L~~-~~l~G~~~s~ADi~l~~~l~~~~~~---~~---~--~~~p~l~~w~~r~~~r~~~~ 208 (210)
T PRK10387 142 GLIKEINADLRAL-DPLIVK-PNAVNGELSTDDIHLFPILRNLTLV---KG---I--EWPPRVADYRDNMSKKTQVP 208 (210)
T ss_pred HHHHHHHHHHHHH-HHHhcC-ccccCCCCCHHHHHHHHHHhcceee---cC---C--CCCHHHHHHHHHHHHHhCCC
Confidence 4567888999999 999976 9999999999999999999887421 12 2 24699999999999999874
No 50
>PF14497 GST_C_3: Glutathione S-transferase, C-terminal domain; PDB: 3AY8_A 2UZ8_B 1V2A_C 2HNL_A 2YV9_B 3H1N_A 3FR6_A 1Q4J_B 1PA3_B 1OKT_B ....
Probab=99.11 E-value=1.4e-10 Score=71.56 Aligned_cols=68 Identities=22% Similarity=0.364 Sum_probs=51.4
Q ss_pred hHHHHHHHHHHHHHHHHhhhcccCCCc--eeccCCCchHHHHHHHHHHHHHHHHHHhcCcccCCCCCchHHHHHHHhhc
Q 045128 12 GQDLENAVKAALEMLQTVEKHGLGEKK--FFNGDNIGLADLAFGAIAYWLQVLEDVMGVKLFESHKFPSWHEWFENSRK 88 (117)
Q Consensus 12 ~~~~~~~~~~l~~~l~~l~e~~L~~~~--~~~Gd~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~~~~~ 88 (117)
+...+...+++.+.+..+ ++.|++++ |++|+++|+||+++++++..+. ..+ ++ ..+|+|.+|++||.+
T Consensus 30 ~~~~~~~~~~~~~~l~~l-~~~L~~~~~~~l~G~~~T~AD~~v~~~l~~~~------~~~-~~-~~~p~L~~w~~ri~~ 99 (99)
T PF14497_consen 30 EASGDFSREELPKALKIL-EKHLAERGGDFLVGDKPTLADIAVFGFLASLR------WAD-FP-KDYPNLVRWYERIEE 99 (99)
T ss_dssp CCHHHHHHHHHHHHHHHH-HHHHHHTSSSSSSSSS--HHHHHHHHHHHHHH------CCH-HT-TTCHHHHHHHHHHHT
T ss_pred hhhHHhhHHHHHHHHHHH-HHHHHcCCCeeecCCCCCHHHHHHHHHHHHHh------hcc-cc-cccHHHHHHHHhhcC
Confidence 345567778899999999 99998766 9999999999999888774442 111 21 589999999999874
No 51
>cd03205 GST_C_6 GST_C family, unknown subfamily 6; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.08 E-value=5.6e-10 Score=68.70 Aligned_cols=67 Identities=18% Similarity=0.253 Sum_probs=52.7
Q ss_pred hHHHHHHHHHHHHHHHHhhhcccCCCceeccCCCchHHHHHHHHHHHHHHHHHHhcCcccCCCCCchHHHHHHHh
Q 045128 12 GQDLENAVKAALEMLQTVEKHGLGEKKFFNGDNIGLADLAFGAIAYWLQVLEDVMGVKLFESHKFPSWHEWFENS 86 (117)
Q Consensus 12 ~~~~~~~~~~l~~~l~~l~e~~L~~~~~~~Gd~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~~~ 86 (117)
++..+...+++.+.|+.+ |+.|++++| +++|+|||++++.+.|.... ..+... .+++|+|.+|+++|
T Consensus 32 ~~~~~~~~~~~~~~l~~l-e~~L~~~~~---d~~TlADi~l~~~l~~~~~~--~~~~~~--~~~~p~l~~w~~rm 98 (98)
T cd03205 32 QPWLERQRGKIERALDAL-EAELAKLPL---DPLDLADIAVACALGYLDFR--HPDLDW--RAAHPALAAWYARF 98 (98)
T ss_pred hHHHHHHHHHHHHHHHHH-HHhhhhCCC---CCCCHHHHHHHHHHHHHHhH--ccCcch--hhhChHHHHHHHhC
Confidence 445677788899999999 999988888 99999999999999887431 012221 26899999999986
No 52
>PRK15113 glutathione S-transferase; Provisional
Probab=99.07 E-value=3.1e-10 Score=78.97 Aligned_cols=74 Identities=14% Similarity=0.113 Sum_probs=58.8
Q ss_pred HHHHHHHHHHHHHHhhhcccCC-CceeccCCCchHHHHHHHHHHHHHHHHHHhcCcccCCCCCchHHHHHHHhhccccch
Q 045128 15 LENAVKAALEMLQTVEKHGLGE-KKFFNGDNIGLADLAFGAIAYWLQVLEDVMGVKLFESHKFPSWHEWFENSRKVPVIE 93 (117)
Q Consensus 15 ~~~~~~~l~~~l~~l~e~~L~~-~~~~~Gd~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~~~~~~p~~~ 93 (117)
.+...+++.+.++.+ |+.|++ ++|++|+ +|+|||++++++.|+.. .+..+ .|+|.+|.++|.+||+++
T Consensus 135 ~~~~~~~~~~~l~~l-e~~L~~~~~~l~G~-~TlADi~l~~~l~~~~~----~~~~~-----~p~l~~~~~r~~~rp~~~ 203 (214)
T PRK15113 135 SEAGKAAAEKLFAVA-ERLLAPGQPNLFGE-WCIADTDLALMLNRLVL----HGDEV-----PERLADYATFQWQRASVQ 203 (214)
T ss_pred cHHHHHHHHHHHHHH-HHHHhcCCCEeeCC-ccHHHHHHHHHHHHHHH----cCCCC-----CHHHHHHHHHHhcCHHHH
Confidence 355667788999999 999974 4799996 99999999999877632 23221 299999999999999999
Q ss_pred hcCCCh
Q 045128 94 ENLPNQ 99 (117)
Q Consensus 94 ~~~~~~ 99 (117)
++....
T Consensus 204 ~~~~~~ 209 (214)
T PRK15113 204 RWLALS 209 (214)
T ss_pred HHHHHh
Confidence 876543
No 53
>COG0435 ECM4 Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.03 E-value=1e-10 Score=83.74 Aligned_cols=87 Identities=21% Similarity=0.362 Sum_probs=71.0
Q ss_pred cChHHHHHHHHHHHHHHHHhhhcccCCCceeccCCCchHHHHHHHHHHHHH-HHHHHhcCcccCCCCCchHHHHHHHhhc
Q 045128 10 STGQDLENAVKAALEMLQTVEKHGLGEKKFFNGDNIGLADLAFGAIAYWLQ-VLEDVMGVKLFESHKFPSWHEWFENSRK 88 (117)
Q Consensus 10 ~~~~~~~~~~~~l~~~l~~l~e~~L~~~~~~~Gd~~t~aDi~l~~~~~~~~-~~~~~~~~~~~~~~~~P~l~~w~~~~~~ 88 (117)
++++.++++.+++.+.|+.+ |+.|+++.|++||++|-||+-+++.+-++. ++..++..++-...+||+|..|+..+.+
T Consensus 198 ~tq~aYeea~~~lF~~Ld~l-E~~L~~~ryl~Gd~lTEAD~RLftTlvRFD~VYvgHFKCN~~rI~dypnL~~yLr~LYq 276 (324)
T COG0435 198 TTQEAYEEAVKKLFEALDKL-EQILSERRYLTGDQLTEADIRLFTTLVRFDPVYVGHFKCNLRRIRDYPNLWGYLRDLYQ 276 (324)
T ss_pred chHHHHHHHHHHHHHHHHHH-HHHhhcCeeeccccchHhhhhhhheeEeecceEEeeeecccchhhcCchHHHHHHHHhc
Confidence 47899999999999999999 999999999999999999999998765442 2222334443222569999999999999
Q ss_pred cccchhcCC
Q 045128 89 VPVIEENLP 97 (117)
Q Consensus 89 ~p~~~~~~~ 97 (117)
.|++++++.
T Consensus 277 ~pg~~~T~d 285 (324)
T COG0435 277 LPGFAETVD 285 (324)
T ss_pred Ccccccccc
Confidence 999998754
No 54
>cd03211 GST_C_Metaxin2 GST_C family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait. Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.
Probab=98.96 E-value=1.3e-09 Score=70.48 Aligned_cols=70 Identities=14% Similarity=0.212 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHHHHHhhhcccCCCceeccCCCchHHHHHHHHHHHHHHH-H--HHhcCcccCCCCCchHHHHHHHhh
Q 045128 14 DLENAVKAALEMLQTVEKHGLGEKKFFNGDNIGLADLAFGAIAYWLQVL-E--DVMGVKLFESHKFPSWHEWFENSR 87 (117)
Q Consensus 14 ~~~~~~~~l~~~l~~l~e~~L~~~~~~~Gd~~t~aDi~l~~~~~~~~~~-~--~~~~~~~~~~~~~P~l~~w~~~~~ 87 (117)
..++..+.+.+.|+.| +..|++++||.||++|.+|+++++++.++... . ...+ .. ..++|||.+|.+||.
T Consensus 54 ~~ee~~~~~~~~l~aL-s~~Lg~~~~l~Gd~pT~~Da~vf~~la~~~~~~~~~~~l~-~~--~~~~pnL~~y~~Ri~ 126 (126)
T cd03211 54 TLDQVIEEVDQCCQAL-SQRLGTQPYFFGDQPTELDALVFGHLFTILTTQLPNDELA-EK--VKKYSNLLAFCRRIE 126 (126)
T ss_pred CHHHHHHHHHHHHHHH-HHHHCCCCCCCCCCCcHHHHHHHHHHHHHHhcCCCChHHH-HH--HHhCcHHHHHHHhcC
Confidence 4566777888999999 99999999999999999999999987665321 0 0111 11 258999999999973
No 55
>KOG4420 consensus Uncharacterized conserved protein (Ganglioside-induced differentiation associated protein 1, GDAP1) [Function unknown]
Probab=98.93 E-value=6.8e-09 Score=74.00 Aligned_cols=87 Identities=22% Similarity=0.352 Sum_probs=68.0
Q ss_pred HHHHHHHHHHHHHHHhhhcccCC----CceeccCCCchHHHHHHHHHHHHHHHHHHhcCc--ccCCCCCchHHHHHHHhh
Q 045128 14 DLENAVKAALEMLQTVEKHGLGE----KKFFNGDNIGLADLAFGAIAYWLQVLEDVMGVK--LFESHKFPSWHEWFENSR 87 (117)
Q Consensus 14 ~~~~~~~~l~~~l~~l~e~~L~~----~~~~~Gd~~t~aDi~l~~~~~~~~~~~~~~~~~--~~~~~~~P~l~~w~~~~~ 87 (117)
...+...++...|+.+ |..|.. ..|++|+.||+||+++++++.++..+ |.. .+...+.|||..|+.|+.
T Consensus 202 ~lkkild~l~~~Ld~V-EteLe~r~~~~~wL~G~efslADVsLg~~LhRL~~L----g~e~~yw~~gsrpnle~Yf~rvr 276 (325)
T KOG4420|consen 202 YLKKILDELAMVLDQV-ETELEKRKLCELWLCGCEFSLADVSLGATLHRLKFL----GLEKKYWEDGSRPNLESYFERVR 276 (325)
T ss_pred HHHHHHHHHHHHHHHH-HHHHhhccccceeeccccchHHHHHHHHHHHHHHHc----ccHHHhcccCCCccHHHHHHHHH
Confidence 4566667777888888 888865 58999999999999999999887542 321 132357899999999999
Q ss_pred ccccchhcCCChhHHHHH
Q 045128 88 KVPVIEENLPNQHEMVIA 105 (117)
Q Consensus 88 ~~p~~~~~~~~~~~~~~~ 105 (117)
.|+++.++.++.-....|
T Consensus 277 rR~sf~kvlg~~fnilr~ 294 (325)
T KOG4420|consen 277 RRFSFRKVLGDIFNILRF 294 (325)
T ss_pred hhhHHHHhhhhHHHHHHH
Confidence 999999988876555553
No 56
>cd03212 GST_C_Metaxin1_3 GST_C family, Metaxin subfamily, Metaxin 1-like proteins; composed of metaxins 1 and 3, and similar proteins. Mammalian metaxin (or metaxin 1) is a component of the preprotein import complex of the mitochondrial outer membrane. Metaxin extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. Like the murine gene, the human metaxin gene is located downstream to the glucocerebrosidase (GBA) pseudogene and is convergently transcribed. Inherited deficiency of GBA results in Gaucher disease, which presents many diverse clinical phenotypes. Alterations in the metaxin gene, in addition to GBA mutations, may be associated with Gaucher disease. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals.
Probab=98.92 E-value=4.6e-09 Score=68.85 Aligned_cols=72 Identities=18% Similarity=0.123 Sum_probs=54.1
Q ss_pred HHHHHHHHHHHHHHHhhhcccCCCceeccCCCchHHHHHHHHHHHHHHHHHHhcCcc--cCCCCCchHHHHHHHhhc
Q 045128 14 DLENAVKAALEMLQTVEKHGLGEKKFFNGDNIGLADLAFGAIAYWLQVLEDVMGVKL--FESHKFPSWHEWFENSRK 88 (117)
Q Consensus 14 ~~~~~~~~l~~~l~~l~e~~L~~~~~~~Gd~~t~aDi~l~~~~~~~~~~~~~~~~~~--~~~~~~P~l~~w~~~~~~ 88 (117)
..++..+++.+.++.| ++.|++++||.||++|.+|+++++++..+... . .+... ....++|||.+|.+||.+
T Consensus 61 ~~~~~~~~a~~~l~~l-~~~L~~~~~~~Gd~~t~~D~~~~~~l~~~~~~-~-~~~~~l~~~~~~~pnL~~~~~ri~~ 134 (137)
T cd03212 61 VEAEIYRDAKECLNLL-SQRLGESQFFFGDTPTSLDALVFGYLAPLLKA-P-LPNNKLQNHLKQCPNLCRFCDRILS 134 (137)
T ss_pred hHHHHHHHHHHHHHHH-HHHHCCCCcCCCCCCcHHHHHHHHHHHHHHhc-c-CCChHHHHHHHHCcHHHHHHHHHHH
Confidence 4566777888999999 99999999999999999999999887654210 0 11000 002589999999999975
No 57
>cd03197 GST_C_mPGES2 GST_C family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2. Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH, or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature, and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated and a C-terminal soluble domain with a GST-like structure. The C-terminus contains two structural domains a N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST active site is located in a cleft between t
Probab=98.90 E-value=4.3e-09 Score=69.71 Aligned_cols=67 Identities=19% Similarity=0.196 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHHhhhcccCCCceeccCCCchHHHHHHHHHHHHHHHHHHhcCcccCCCCCchHHHHHHHhhc
Q 045128 17 NAVKAALEMLQTVEKHGLGEKKFFNGDNIGLADLAFGAIAYWLQVLEDVMGVKLFESHKFPSWHEWFENSRK 88 (117)
Q Consensus 17 ~~~~~l~~~l~~l~e~~L~~~~~~~Gd~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~~~~~ 88 (117)
+.++.+-+.++...+...++++|++|+++|+|||++++.+..+... .+.+ +..++|+|.+|++||.+
T Consensus 79 D~r~~L~~a~~~w~~~~~~~~~FlaGd~ptIADisvyg~l~s~e~~---~~~~--Dl~~~p~I~~W~eRm~~ 145 (149)
T cd03197 79 DVREWLYDALNTWVAALGKDRQFHGGSKPNLADLAVYGVLRSVEGH---PAFK--DMVEETKIGEWYERMDA 145 (149)
T ss_pred hHHHHHHHHHHHHHHHhcCCCCccCCCCCCHHHHHHHHHHHHHHHh---cccc--chhhCcCHHHHHHHHHH
Confidence 3455566666544244445678999999999999999988766432 2331 22589999999999986
No 58
>KOG0867 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.89 E-value=7.4e-09 Score=73.01 Aligned_cols=81 Identities=21% Similarity=0.324 Sum_probs=64.7
Q ss_pred hHHHHHHHHHHHHHHHHhhhcccCCCceeccCCCchHHHHHHHHHHHHHHHHHHhcCcccCCCCCchHHHHHHHhhcccc
Q 045128 12 GQDLENAVKAALEMLQTVEKHGLGEKKFFNGDNIGLADLAFGAIAYWLQVLEDVMGVKLFESHKFPSWHEWFENSRKVPV 91 (117)
Q Consensus 12 ~~~~~~~~~~l~~~l~~l~e~~L~~~~~~~Gd~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~~~~~~p~ 91 (117)
....+....++...++.+ |+.|.++.|++|+++|+||+.+.+.+..+.. ...+. .+..++|++.+|++++.++|+
T Consensus 128 ~~~~~~~~~~~~~~~~~~-e~~l~~~~yl~g~~~tlADl~~~~~~~~~~~--~~~~~--~~~~~~p~v~~W~~~~~~~P~ 202 (226)
T KOG0867|consen 128 PTAVKELEAKLRKALDNL-ERFLKTQVYLAGDQLTLADLSLASTLSQFQG--KFATE--KDFEKYPKVARWYERIQKRPA 202 (226)
T ss_pred chhhHHHHHHHHHHHHHH-HHHHccCCcccCCcccHHHHHHhhHHHHHhH--hhhhh--hhhhhChHHHHHHHHHHhCcc
Confidence 345567788899999999 9999989999999999999999988776531 11111 234799999999999999999
Q ss_pred chhcCC
Q 045128 92 IEENLP 97 (117)
Q Consensus 92 ~~~~~~ 97 (117)
.++..+
T Consensus 203 ~~e~~~ 208 (226)
T KOG0867|consen 203 YEEANE 208 (226)
T ss_pred HHHHHH
Confidence 887554
No 59
>TIGR02182 GRXB Glutaredoxin, GrxB family. This model includes the highly abundant E. coli GrxB (Grx2) glutaredoxin which is notably longer than either GrxA or GrxC. Unlike the other two E. coli glutaredoxins, GrxB appears to be unable to reduce ribonucleotide reductase, and may have more to do with resistance to redox stress.
Probab=98.88 E-value=2.9e-09 Score=74.04 Aligned_cols=67 Identities=12% Similarity=0.173 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHHHhhhcccCCCceeccCCCchHHHHHHHHHHHHHHHHHHhcCcccCCCCCc-hHHHHHHHhhccccch
Q 045128 16 ENAVKAALEMLQTVEKHGLGEKKFFNGDNIGLADLAFGAIAYWLQVLEDVMGVKLFESHKFP-SWHEWFENSRKVPVIE 93 (117)
Q Consensus 16 ~~~~~~l~~~l~~l~e~~L~~~~~~~Gd~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P-~l~~w~~~~~~~p~~~ 93 (117)
++..+++.+.|+.+ |+.|++++|++| ++|+|||++++++.|+.. .+ . ..+| +|.+|++||.+++++.
T Consensus 140 ~~~~~~~~~~l~~l-e~~L~~~~~l~g-~~TiADi~l~~~l~~~~~----~~--~---~~~p~~l~~w~~Ri~ar~~~~ 207 (209)
T TIGR02182 140 PGLLEEINADLEEL-DKLIDGPNAVNG-ELSEDDILVFPLLRNLTL----VA--G---INWPSRVADYLDNMSKKSKVP 207 (209)
T ss_pred HHHHHHHHHHHHHH-HHHHhCccccCC-CCCHHHHHHHHHhcCeee----ec--C---CCCChHHHHHHHHHHHHhCCC
Confidence 35667788899999 999999999854 699999999999887632 11 1 1366 9999999999998763
No 60
>KOG2903 consensus Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.73 E-value=3.9e-09 Score=75.17 Aligned_cols=86 Identities=20% Similarity=0.390 Sum_probs=68.0
Q ss_pred cChHHHHHHHHHHHHHHHHhhhcccCCCc--eeccCCCchHHHHHHHHHHHH-HHHHHHhcCcc--cCCCCCchHHHHHH
Q 045128 10 STGQDLENAVKAALEMLQTVEKHGLGEKK--FFNGDNIGLADLAFGAIAYWL-QVLEDVMGVKL--FESHKFPSWHEWFE 84 (117)
Q Consensus 10 ~~~~~~~~~~~~l~~~l~~l~e~~L~~~~--~~~Gd~~t~aDi~l~~~~~~~-~~~~~~~~~~~--~~~~~~P~l~~w~~ 84 (117)
.++|.++..++++.+.|+.+ |..|+++. |++|+++|-|||.+++.+-++ .++..++..+. + +.+||+|..|..
T Consensus 196 ~~~e~Ye~~V~~lfe~LDr~-E~vL~~~~~~f~~G~~LTeaDirLy~TiIRFD~VY~~hFKCn~~~i-r~~Yp~l~~~lk 273 (319)
T KOG2903|consen 196 EKQEAYEEEVNQLFEALDRC-EDVLGKNRKYFLCGDTLTEADIRLYTTIIRFDEVYVQHFKCNKKTI-RDEYPNLHNWLK 273 (319)
T ss_pred cccchHHHHHHHHHHHHHHH-HHHHhcccceEeeccccchhheeeeeeEEeehhhhheeeecchhhh-hccCcHHHHHHH
Confidence 37888999999999999999 99998765 899999999999999755332 23333333332 2 468999999999
Q ss_pred Hhhc-cccchhcCC
Q 045128 85 NSRK-VPVIEENLP 97 (117)
Q Consensus 85 ~~~~-~p~~~~~~~ 97 (117)
.+.. .|+++.+..
T Consensus 274 ~iY~~~~~~~~Ttd 287 (319)
T KOG2903|consen 274 NIYWNIPGFSSTTD 287 (319)
T ss_pred HHHhhccchhhccc
Confidence 9998 899987653
No 61
>PLN02907 glutamate-tRNA ligase
Probab=98.67 E-value=4.5e-08 Score=78.97 Aligned_cols=66 Identities=17% Similarity=0.160 Sum_probs=51.3
Q ss_pred HHHHHHHHhhhcccCCCceeccCCCchHHHHHHHHHHHHHHHHHHhcCcccCCCCCchHHHHHHHhhcccc
Q 045128 21 AALEMLQTVEKHGLGEKKFFNGDNIGLADLAFGAIAYWLQVLEDVMGVKLFESHKFPSWHEWFENSRKVPV 91 (117)
Q Consensus 21 ~l~~~l~~l~e~~L~~~~~~~Gd~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~~~~~~p~ 91 (117)
++...++.+ |..|+.++|++|+++|+|||++++.+..... .+.+... ...+|+|.+|+++|.++|+
T Consensus 94 ~l~~~L~~L-E~~L~~rtYLvGd~lTLADIaL~~~L~~~~~--~~~~~~~--~~~yPnL~RW~erI~arPs 159 (722)
T PLN02907 94 EFENACEYV-DGYLASRTFLVGYSLTIADIAIWSGLAGSGQ--RWESLRK--SKKYQNLVRWFNSISAEYS 159 (722)
T ss_pred HHHHHHHHH-HHHhccCCeecCCCCCHHHHHHHHHHHhhhh--hhhcccc--cccCHHHHHHHHHHHhCCC
Confidence 456678999 9999888999999999999999887644311 1111111 3689999999999999999
No 62
>KOG1695 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.66 E-value=6e-08 Score=67.56 Aligned_cols=75 Identities=21% Similarity=0.331 Sum_probs=56.8
Q ss_pred HHHHHHHHHHHhhhcccC--CCceeccCCCchHHHHHHHHHHHHHHHHHHhcCcccCCCCCchHHHHHHHhhccccchhc
Q 045128 18 AVKAALEMLQTVEKHGLG--EKKFFNGDNIGLADLAFGAIAYWLQVLEDVMGVKLFESHKFPSWHEWFENSRKVPVIEEN 95 (117)
Q Consensus 18 ~~~~l~~~l~~l~e~~L~--~~~~~~Gd~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~~~~~~p~~~~~ 95 (117)
........+..+ ++.|. +++|++||++|+||++++..+..+... ...+.+ +.+|+|.++.+++.++|.++++
T Consensus 124 ~~Pa~~~~~~~~-~~~L~~~~sgflvGd~lT~aDl~i~e~l~~l~~~---~~~~~~--~~~P~L~a~~~kv~~~p~ik~~ 197 (206)
T KOG1695|consen 124 YLPAKPKYFKIL-EKILKKNKSGFLVGDKLTWADLVIAEHLDTLEEL---LDPSAL--DHFPKLKAFKERVSSIPNIKKY 197 (206)
T ss_pred hccchHHHHHHH-HHHHHhCCCCeeecCcccHHHHHHHHHHHHHHHh---cCchhh--ccChHHHHHHHHHhcCchHHHH
Confidence 334556677788 88886 457999999999999999887655331 222222 5789999999999999999987
Q ss_pred CCC
Q 045128 96 LPN 98 (117)
Q Consensus 96 ~~~ 98 (117)
+.+
T Consensus 198 i~~ 200 (206)
T KOG1695|consen 198 LES 200 (206)
T ss_pred Hhc
Confidence 653
No 63
>KOG1422 consensus Intracellular Cl- channel CLIC, contains GST domain [Inorganic ion transport and metabolism]
Probab=98.63 E-value=1.3e-07 Score=65.50 Aligned_cols=98 Identities=17% Similarity=0.305 Sum_probs=76.4
Q ss_pred cChHHHHH-HHHHHHHHHHHhhhcccCC---CceeccCCCchHHHHHHHHHHHHHHH-HHHhcCcccCCCCCchHHHHHH
Q 045128 10 STGQDLEN-AVKAALEMLQTVEKHGLGE---KKFFNGDNIGLADLAFGAIAYWLQVL-EDVMGVKLFESHKFPSWHEWFE 84 (117)
Q Consensus 10 ~~~~~~~~-~~~~l~~~l~~l~e~~L~~---~~~~~Gd~~t~aDi~l~~~~~~~~~~-~~~~~~~~~~~~~~P~l~~w~~ 84 (117)
.+.+...+ ..+.+.+.|..| +++|+. ++|+.||++|.||+.+.|=+..++.. ..+.++++ ++.++++.+|+.
T Consensus 115 ksk~~~n~~~e~~Ll~~L~~L-d~yL~sp~~~~Fl~Gd~lt~aDcsLlPKL~~i~va~k~yk~~~I--P~~lt~V~rYl~ 191 (221)
T KOG1422|consen 115 KSKDAANDGLEKALLKELEKL-DDYLKSPSRRKFLDGDKLTLADCSLLPKLHHIKVAAKHYKNFEI--PASLTGVWRYLK 191 (221)
T ss_pred CchhhccchHHHHHHHHHHHH-HHHhcCccCCccccCCeeeeehhhhchhHHHHHHHHHHhcCCCC--chhhhHHHHHHH
Confidence 44443433 345677888999 999974 79999999999999999987766543 33456665 589999999999
Q ss_pred HhhccccchhcCCChhHHHHHHHHHH
Q 045128 85 NSRKVPVIEENLPNQHEMVIAFKRRQ 110 (117)
Q Consensus 85 ~~~~~p~~~~~~~~~~~~~~~~~~~~ 110 (117)
.+.++.++..+.|..+.+...+....
T Consensus 192 ~~ya~d~F~~tcp~d~ei~~~y~~~~ 217 (221)
T KOG1422|consen 192 NAYARDEFTNTCPADQEIILAYAPVA 217 (221)
T ss_pred HHHhHHHhhcCCchHHHHHHhhhhhh
Confidence 99999999999998877777665543
No 64
>KOG0868 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.34 E-value=6.2e-07 Score=60.94 Aligned_cols=73 Identities=19% Similarity=0.297 Sum_probs=59.9
Q ss_pred HHHHHHHHHHHhhhcccCC--CceeccCCCchHHHHHHHHHHHHHHHHHHhcCcccCCCCCchHHHHHHHhhccccchhc
Q 045128 18 AVKAALEMLQTVEKHGLGE--KKFFNGDNIGLADLAFGAIAYWLQVLEDVMGVKLFESHKFPSWHEWFENSRKVPVIEEN 95 (117)
Q Consensus 18 ~~~~l~~~l~~l~e~~L~~--~~~~~Gd~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~~~~~~p~~~~~ 95 (117)
+..-+.+++..| |+.|.. ++|-+||++|+||+++.+.+..++. +..+ .+.||.+.+-.+.+.+.|+|+.+
T Consensus 133 ~q~~ItkGF~AL-EklL~~~aGkycvGDevtiADl~L~pqv~nA~r----f~vd---l~PYPti~ri~e~l~elpaFq~a 204 (217)
T KOG0868|consen 133 AQHFITKGFTAL-EKLLKSHAGKYCVGDEVTIADLCLPPQVYNANR----FHVD---LTPYPTITRINEELAELPAFQAA 204 (217)
T ss_pred HHHHHHHhHHHH-HHHHHHccCCcccCceeehhhhccchhhhhhhh----cccc---CCcCchHHHHHHHHHhCHHHHhc
Confidence 345577899999 888863 6899999999999999998866543 3444 47899999999999999999988
Q ss_pred CCC
Q 045128 96 LPN 98 (117)
Q Consensus 96 ~~~ 98 (117)
.|+
T Consensus 205 hP~ 207 (217)
T KOG0868|consen 205 HPD 207 (217)
T ss_pred CCC
Confidence 775
No 65
>KOG4244 consensus Failed axon connections (fax) protein/glutathione S-transferase-like protein [Signal transduction mechanisms]
Probab=97.74 E-value=9.8e-06 Score=58.09 Aligned_cols=68 Identities=28% Similarity=0.294 Sum_probs=51.7
Q ss_pred HHHHHHHHHHHHhhhcccCCCceeccCCCchHHHHHHHHHHHHHHHHHHh--cCcccCCCCCchHHHHHHHhhc
Q 045128 17 NAVKAALEMLQTVEKHGLGEKKFFNGDNIGLADLAFGAIAYWLQVLEDVM--GVKLFESHKFPSWHEWFENSRK 88 (117)
Q Consensus 17 ~~~~~l~~~l~~l~e~~L~~~~~~~Gd~~t~aDi~l~~~~~~~~~~~~~~--~~~~~~~~~~P~l~~w~~~~~~ 88 (117)
+..+.+.+-|+.+ +..|++++|+.||++|-+|..+|..+..+.- ++. -.++++ +++|||..|.+|+.+
T Consensus 203 Ei~ell~rDlr~i-~~~Lg~KkflfGdkit~~DatvFgqLa~v~Y--P~~~~i~d~le-~d~p~l~eYceRIr~ 272 (281)
T KOG4244|consen 203 EIDELLHRDLRAI-SDYLGDKKFLFGDKITPADATVFGQLAQVYY--PFRSHISDLLE-GDFPNLLEYCERIRK 272 (281)
T ss_pred HHHHHHHHHHHHH-HHHhCCCccccCCCCCcceeeehhhhhheec--cCCCcHHHHHh-hhchHHHHHHHHHHH
Confidence 3455677889999 9999999999999999999998887654321 110 012343 789999999999987
No 66
>PF14834 GST_C_4: Glutathione S-transferase, C-terminal domain; PDB: 3BBY_A.
Probab=97.52 E-value=0.00021 Score=45.34 Aligned_cols=71 Identities=18% Similarity=0.205 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHHHhhhcccCC-CceeccCCCchHHHHHHHHHHHHHHHHHHhcCcccCCCCCchHHHHHHHhhccccchh
Q 045128 16 ENAVKAALEMLQTVEKHGLGE-KKFFNGDNIGLADLAFGAIAYWLQVLEDVMGVKLFESHKFPSWHEWFENSRKVPVIEE 94 (117)
Q Consensus 16 ~~~~~~l~~~l~~l~e~~L~~-~~~~~Gd~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~~~~~~p~~~~ 94 (117)
+.+...+.+.+... +..|.. ++|+.| ++||||..+++++.++.. .|.+ -.+++..|.++.-++|+|++
T Consensus 42 ~~a~~~a~kL~~~a-~~ll~~g~~~LFG-ewsIAD~dlA~ml~Rl~~----~gd~-----vP~~l~~Ya~~qwqrpsVQ~ 110 (117)
T PF14834_consen 42 EAAQAAAQKLIAVA-ERLLADGGPNLFG-EWSIADADLALMLNRLVT----YGDP-----VPERLADYAERQWQRPSVQR 110 (117)
T ss_dssp HHHHHHHHHHHHHH-HHHTTT--SSTTS-S--HHHHHHHHHHHHHHT----TT---------HHHHHHHHHHHT-HHHHH
T ss_pred HHHHHHHHHHHHHH-HHHhccCCCCccc-cchHHHHHHHHHHHHHHH----cCCC-----CCHHHHHHHHHHHCCHHHHH
Confidence 45556666677777 777765 577766 599999999999988743 3443 34899999999999999998
Q ss_pred cCC
Q 045128 95 NLP 97 (117)
Q Consensus 95 ~~~ 97 (117)
++.
T Consensus 111 Wla 113 (117)
T PF14834_consen 111 WLA 113 (117)
T ss_dssp HHH
T ss_pred HHH
Confidence 754
No 67
>KOG3029 consensus Glutathione S-transferase-related protein [General function prediction only]
Probab=97.30 E-value=0.00056 Score=49.82 Aligned_cols=66 Identities=15% Similarity=0.218 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHHhhhccc-CCCceeccCCCchHHHHHHHHHHHHHHHHHHhcCcccCCCCCchHHHHHHHhhc
Q 045128 17 NAVKAALEMLQTVEKHGL-GEKKFFNGDNIGLADLAFGAIAYWLQVLEDVMGVKLFESHKFPSWHEWFENSRK 88 (117)
Q Consensus 17 ~~~~~l~~~l~~l~e~~L-~~~~~~~Gd~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~~~~~ 88 (117)
+.++.+-++.+.. -..+ .+.+|++|+++++||+.++.++..+..++.+.+ .+ ..-++..|+.+|+.
T Consensus 288 D~Re~lydA~d~W-vaalgknr~flGG~kPnLaDLsvfGvl~sm~gc~afkd--~~---q~t~I~eW~~rmea 354 (370)
T KOG3029|consen 288 DEREHLYDAADQW-VAALGKNRPFLGGKKPNLADLSVFGVLRSMEGCQAFKD--CL---QNTSIGEWYYRMEA 354 (370)
T ss_pred hHHHHHHHHHHHH-HHHhCCCCCccCCCCCchhhhhhhhhhhHhhhhhHHHH--HH---hcchHHHHHHHHHH
Confidence 3445555665554 3334 568999999999999999999987766554432 22 45789999999886
No 68
>KOG3027 consensus Mitochondrial outer membrane protein Metaxin 2, Metaxin 1-binding protein [Cell wall/membrane/envelope biogenesis; Intracellular trafficking, secretion, and vesicular transport]
Probab=97.26 E-value=0.00062 Score=47.55 Aligned_cols=73 Identities=12% Similarity=0.265 Sum_probs=53.1
Q ss_pred hHHHHHHHHHHHHHHHHhhhcccCCCceeccCCCchHHHHHHHHHHHHHHHHHHhcC---cccCCCCCchHHHHHHHhhc
Q 045128 12 GQDLENAVKAALEMLQTVEKHGLGEKKFFNGDNIGLADLAFGAIAYWLQVLEDVMGV---KLFESHKFPSWHEWFENSRK 88 (117)
Q Consensus 12 ~~~~~~~~~~l~~~l~~l~e~~L~~~~~~~Gd~~t~aDi~l~~~~~~~~~~~~~~~~---~~~~~~~~P~l~~w~~~~~~ 88 (117)
+...+...+++....+.| +..|+.++||.|+++|=+|..+|..+..+-.. ..... +.+ .+||+|-++.+|+.+
T Consensus 172 ~~~~DqVie~vdkc~~aL-sa~L~~q~yf~g~~P~elDAlvFGHlytilTt-~Lpn~ela~~l--kkys~LlefcrrIeq 247 (257)
T KOG3027|consen 172 DKTMDQVIEQVDKCCRAL-SAQLGSQPYFTGDQPTELDALVFGHLYTILTT-RLPNMELANIL--KKYSNLLEFCRRIEQ 247 (257)
T ss_pred cccHHHHHHHHHHHHHHH-HHHhcCCCccCCCCccHHHHHHHhhhHHhhhh-cCCcHHHHHHH--HHhHHHHHHHHHHHH
Confidence 345678888999999999 99999999999999999999988876443210 00000 111 567888888877765
No 69
>PF04399 Glutaredoxin2_C: Glutaredoxin 2, C terminal domain; InterPro: IPR007494 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. Unlike other glutaredoxins, glutaredoxin 2 (Grx2) cannot reduce ribonucleotide reductase. Grx2 has significantly higher catalytic activity in the reduction of mixed disulphides with glutathione (GSH) compared with other glutaredoxins. The active site residues (Cys9-Pro10-Tyr11-Cys12, in Escherichia coli Grx2, P39811 from SWISSPROT), which are found at the interface between the N- and C-terminal domains are identical to other glutaredoxins, but there is no other similarity between glutaredoxin 2 and other glutaredoxins. Grx2 is structurally similar to glutathione-S-transferases (GST), but there is no obvious sequence similarity. The inter-domain contacts are mainly hydrophobic, suggesting that the two domains are unlikely to be stable on their own. Both domains are needed for correct folding and activity of Grx2. It is thought that the primary function of Grx2 is to catalyse reversible glutathionylation of proteins with GSH in cellular redox regulation including the response to oxidative stress. The N-terminal domain is IPR004045 from INTERPRO.; PDB: 1G7O_A 3IR4_A.
Probab=97.21 E-value=0.00059 Score=44.50 Aligned_cols=67 Identities=13% Similarity=0.194 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHHHhhhcccCCCceeccCCCchHHHHHHHHHHHHHHHHHHhcCcccCCCCCchHHHHHHHhhccccc
Q 045128 16 ENAVKAALEMLQTVEKHGLGEKKFFNGDNIGLADLAFGAIAYWLQVLEDVMGVKLFESHKFPSWHEWFENSRKVPVI 92 (117)
Q Consensus 16 ~~~~~~l~~~l~~l~e~~L~~~~~~~Gd~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~~~~~~p~~ 92 (117)
.+...++...|..+ +..+..... ++.++|+-||.+|++++.+.. ..|..+ -|++.+|+++|.+.-.|
T Consensus 58 ~~~i~~l~~~L~~L-e~ll~~~~~-~n~~LS~dDi~lFp~LR~Lti---vkgi~~-----P~~V~~Y~~~~s~~t~V 124 (132)
T PF04399_consen 58 PELIAELNADLEEL-EPLLASPNA-VNGELSIDDIILFPILRSLTI---VKGIQW-----PPKVRAYMDRMSKATGV 124 (132)
T ss_dssp HHHHHHHHHHHHHH-HHH-SCTTB-TTSS--HHHHHHHHHHHHHCT---CTTS--------HHHHHHHHHHHHHHT-
T ss_pred HHHHHHHHHHHHHH-HHHhccccc-cCCCCCHHHHHHHHHHhhhhh---ccCCcC-----CHHHHHHHHHHHHHcCC
Confidence 34556777888888 888864443 344999999999999976632 234332 38999999999986555
No 70
>cd03199 GST_C_GRX2 GST_C family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E. coli GRX2, an atypical GRX with a molecular mass of about 24kD (most GRXs range from 9-12kD). GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain, but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.
Probab=96.89 E-value=0.0041 Score=40.34 Aligned_cols=66 Identities=14% Similarity=0.172 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHhhhcccCCCceeccCCCchHHHHHHHHHHHHHHHHHHhcCcccCCCCCchHHHHHHHhhccccc
Q 045128 17 NAVKAALEMLQTVEKHGLGEKKFFNGDNIGLADLAFGAIAYWLQVLEDVMGVKLFESHKFPSWHEWFENSRKVPVI 92 (117)
Q Consensus 17 ~~~~~l~~~l~~l~e~~L~~~~~~~Gd~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~~~~~~p~~ 92 (117)
+..+++...|..+ +..+.... ..+..+|+-||.+|++++.+.. ..|..+ -|++.+|+++|.+.-.|
T Consensus 60 ~~i~~l~~~L~~l-~~ll~~~~-~~n~~ls~DDi~lFp~LR~Lt~---vkgi~~-----P~~V~~Y~~~~s~~t~V 125 (128)
T cd03199 60 QYIAALNALLEEL-DPLILSSE-AVNGQLSTDDIILFPILRNLTL---VKGLVF-----PPKVKAYLERMSALTKV 125 (128)
T ss_pred HHHHHHHHHHHHH-HHHHcCcc-ccCCcCCHHHHHHHHHHhhhhh---hcCCCC-----CHHHHHHHHHHHHHhCC
Confidence 3445666777777 77774333 3566899999999999987643 244432 38999999999986544
No 71
>KOG3028 consensus Translocase of outer mitochondrial membrane complex, subunit TOM37/Metaxin 1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.35 E-value=0.02 Score=42.23 Aligned_cols=70 Identities=26% Similarity=0.263 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHHHHhhhcccCCCceeccCCCchHHHHHHHHHHHHHHHH---HHhcCcccCCCCCchHHHHHHHhhc
Q 045128 15 LENAVKAALEMLQTVEKHGLGEKKFFNGDNIGLADLAFGAIAYWLQVLE---DVMGVKLFESHKFPSWHEWFENSRK 88 (117)
Q Consensus 15 ~~~~~~~l~~~l~~l~e~~L~~~~~~~Gd~~t~aDi~l~~~~~~~~~~~---~~~~~~~~~~~~~P~l~~w~~~~~~ 88 (117)
.+....+..+++..+ ++.|++++||.||++|-.|..++.++..+.... ...-..+ ..+|||.++..++.+
T Consensus 161 e~~i~~~Aska~~~L-S~~Lgs~kffFgd~psslDa~lfs~la~~~~~~Lp~~~Lq~~l---~~~~NL~~~~~~i~s 233 (313)
T KOG3028|consen 161 EDQIYKDASKALNLL-STLLGSKKFFFGDKPSSLDALLFSYLAILLQVALPNDSLQVHL---LAHKNLVRYVERIRS 233 (313)
T ss_pred HHHHHHHHHHHHHHH-HHHhcCceEeeCCCCchHHHHHHHHHHHHHhccCCchhHHHHH---HhcchHHHHHHHHHH
Confidence 344566788899999 999999999999999999999998776532100 0000011 248999999999876
No 72
>PF11801 Tom37_C: Tom37 C-terminal domain; InterPro: IPR019564 Tom37 is one of the outer membrane proteins that make up the TOM complex for guiding cytosolic mitochondrial beta-barrel proteins from the cytosol across the outer mitochondrial membrane into the intramembrane space. In conjunction with Tom70, it guides peptides without an mitochondrial targeting sequence (MTS) into Tom40, the protein that forms the passage through the outer membrane []. It has homology with metaxin, also part of the outer mitochondrial membrane beta-barrel protein transport complex []. This entry represents outer mitochondrial membrane transport complex proteins Tom37 and metaxin.; GO: 0006626 protein targeting to mitochondrion, 0005741 mitochondrial outer membrane
Probab=91.48 E-value=0.84 Score=30.87 Aligned_cols=37 Identities=32% Similarity=0.317 Sum_probs=30.5
Q ss_pred HHHHHHHhhhcccCCC---ceeccCC-CchHHHHHHHHHHHH
Q 045128 22 ALEMLQTVEKHGLGEK---KFFNGDN-IGLADLAFGAIAYWL 59 (117)
Q Consensus 22 l~~~l~~l~e~~L~~~---~~~~Gd~-~t~aDi~l~~~~~~~ 59 (117)
..+.+..| ++.|++. +|+.|++ +|-+|+.++..+..+
T Consensus 113 a~~~l~~L-~~~L~~~~~~~~~f~~~~psslD~L~~ayL~l~ 153 (168)
T PF11801_consen 113 AMECLSLL-EELLGEWEEARYFFGDSKPSSLDCLAFAYLALL 153 (168)
T ss_pred HHHHHHHH-HHHHhhccccccccCCCCCCHHHHHHHHHHHHH
Confidence 45688899 9899877 8888887 999999988877554
No 73
>KOG1147 consensus Glutamyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=83.01 E-value=0.71 Score=36.97 Aligned_cols=59 Identities=14% Similarity=0.282 Sum_probs=37.8
Q ss_pred HHHHHHHHhhhcccCCCceeccCCCchHHHHHHHHHHHHHHHHHHhcCcccCCCCCchHHHHHH
Q 045128 21 AALEMLQTVEKHGLGEKKFFNGDNIGLADLAFGAIAYWLQVLEDVMGVKLFESHKFPSWHEWFE 84 (117)
Q Consensus 21 ~l~~~l~~l~e~~L~~~~~~~Gd~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~ 84 (117)
++...+..+ +..|.-..|++|.++|+||.+++..+..-......... ...+-++.+|+.
T Consensus 92 ~~s~~~~~l-d~~l~~~t~lvg~sls~Ad~aiw~~l~~n~~~~~~lk~----~k~~~~v~Rw~~ 150 (712)
T KOG1147|consen 92 EISSSLSEL-DKFLVLRTFLVGNSLSIADFAIWGALHSNGMRQEQLKA----KKDYQNVERWYD 150 (712)
T ss_pred HHHHHHHHH-HhhhhHHHHhhccchhHHHHHHHHHHhcccchHHHHHh----hCCchhhhhhcC
Confidence 455667777 77776667999999999999988877432111111110 134567777776
No 74
>COG2999 GrxB Glutaredoxin 2 [Posttranslational modification, protein turnover, chaperones]
Probab=74.95 E-value=6.1 Score=27.39 Aligned_cols=65 Identities=11% Similarity=0.100 Sum_probs=44.7
Q ss_pred HHHHHHHHHHhhhcccCCCceeccCCCchHHHHHHHHHHHHHHHHHHhcCcccCCCCCchHHHHHHHhhccccch
Q 045128 19 VKAALEMLQTVEKHGLGEKKFFNGDNIGLADLAFGAIAYWLQVLEDVMGVKLFESHKFPSWHEWFENSRKVPVIE 93 (117)
Q Consensus 19 ~~~l~~~l~~l~e~~L~~~~~~~Gd~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~~~~~~p~~~ 93 (117)
..++.+.|+.+ +..+.+.. -....+|.=||.+||+++.+.. ..|..+ -.++..|+.+|.+...+.
T Consensus 144 ~~~i~~dl~~l-~~Li~~~s-~~n~~l~~ddi~vFplLRnlt~---v~gi~w-----ps~v~dy~~~msektqV~ 208 (215)
T COG2999 144 LKRIQADLRAL-DKLIVGPS-AVNGELSEDDILVFPLLRNLTL---VAGIQW-----PSRVADYRDNMSEKTQVN 208 (215)
T ss_pred HHHHHHHHHHH-HHHhcCcc-hhccccchhhhhhhHHhcccee---cccCCC-----cHHHHHHHHHHHHhhCcc
Confidence 45666778888 88776433 2356799999999999976532 234322 257999999998865543
No 75
>KOG1668 consensus Elongation factor 1 beta/delta chain [Transcription]
Probab=64.24 E-value=3.8 Score=29.20 Aligned_cols=58 Identities=19% Similarity=0.351 Sum_probs=41.5
Q ss_pred HHHHHHhhhcccCCCceeccCCCchHHHHHHHHHHHHHHHHHHhcCcccCCCCCchHHHHHHHhhccccc
Q 045128 23 LEMLQTVEKHGLGEKKFFNGDNIGLADLAFGAIAYWLQVLEDVMGVKLFESHKFPSWHEWFENSRKVPVI 92 (117)
Q Consensus 23 ~~~l~~l~e~~L~~~~~~~Gd~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~~~~~~p~~ 92 (117)
..++..+ +..|.+++|..|.+++-.|+.++.-+ +... ....+++..+|+..+.++-..
T Consensus 10 ~~glk~l-~~sLA~ks~~~g~~~s~edv~vf~al----------~~ep-~s~~~v~~~~w~~~l~a~~~~ 67 (231)
T KOG1668|consen 10 PAGLKKL-NKSLAEKSYIEGYQLSKEDVVVFAAL----------GVEP-QSARLVNAERWYSKLEALLRL 67 (231)
T ss_pred hhhhhhh-hHhhhcccCCCCCCcccccceeehhc----------ccCc-chhhhhHHHHHHHHHHHHHHH
Confidence 4567788 88899999999999999999876543 1111 124677888888777664443
No 76
>PF09236 AHSP: Alpha-haemoglobin stabilising protein; InterPro: IPR015317 Alpha-haemoglobin stabilising protein (AHSP) acts a molecular chaperone for free alpha-haemoglobin, preventing the harmful aggregation of alpha-haemoglobin during normal erythroid cell development: it specifically protects free alpha-haemoglobin from precipitation. AHSP adopts a helical secondary structure consisting of an elongated antiparallel three alpha-helix bundle []. ; GO: 0030492 hemoglobin binding, 0006457 protein folding, 0020027 hemoglobin metabolic process, 0030097 hemopoiesis, 0050821 protein stabilization; PDB: 1Y01_A 1XZY_A 3OVU_A 1W0A_A 3IA3_C 1Z8U_A 1W0B_A 1W09_A.
Probab=30.90 E-value=92 Score=18.79 Aligned_cols=23 Identities=17% Similarity=0.235 Sum_probs=18.3
Q ss_pred hhhcChHHHHHHHHHHHHHHHHh
Q 045128 7 MFFSTGQDLENAVKAALEMLQTV 29 (117)
Q Consensus 7 ~~~~~~~~~~~~~~~l~~~l~~l 29 (117)
.+.+.+.+.+++.+++...|..+
T Consensus 51 ~~~GeqqeqdrAlqel~qeL~tl 73 (89)
T PF09236_consen 51 QMTGEQQEQDRALQELQQELNTL 73 (89)
T ss_dssp T--SSHHHHHHHHHHHHHHHHHH
T ss_pred HhcCChHHHHHHHHHHHHHHHHH
Confidence 44568889999999999988887
No 77
>cd06891 PX_Vps17p The phosphoinositide binding Phox Homology domain of yeast sorting nexin Vps17p. The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. Vsp17p forms a dimer with Vps5p, the yeast counterpart of human SNX1, and is part of the retromer complex that mediates the transport of the carboxypeptidase Y receptor Vps10p from endosomes to Golgi. Similar to Vps5p and SNX1, Vps17p harbors a Bin/Amphiphysin/Rvs (BAR) domain, which detects membrane curvatur
Probab=27.92 E-value=55 Score=21.57 Aligned_cols=27 Identities=15% Similarity=0.448 Sum_probs=18.3
Q ss_pred chHHHHHHHhhccccchhcCCChhHHHHHHH
Q 045128 77 PSWHEWFENSRKVPVIEENLPNQHEMVIAFK 107 (117)
Q Consensus 77 P~l~~w~~~~~~~p~~~~~~~~~~~~~~~~~ 107 (117)
-.|++|++|+.++|... ..+.+..|++
T Consensus 112 ~~LqrfL~RV~~hP~L~----~d~~l~~FLE 138 (140)
T cd06891 112 ANLQRWFNRVCSDPILI----RDEELRFFIE 138 (140)
T ss_pred HHHHHHHHHHhCChhhc----cCHHHHHHhc
Confidence 46788999999999654 3444555543
No 78
>TIGR02978 phageshock_pspC phage shock protein C. All members of this protein family are the phage shock protein PspC. These proteins contain a PspC domain, as do other members of the larger family of proteins described by Pfam model pfam04024. The phage shock regulon is restricted to the Proteobacteria and somewhat sparsely distributed there. It is expressed, under positive control of a sigma-54-dependent transcription factor, PspF, which binds and is modulated by PspA. Stresses that induce the psp regulon include phage secretin overexpression, ethanol, heat shock, and protein export defects.
Probab=25.88 E-value=35 Score=21.86 Aligned_cols=35 Identities=17% Similarity=0.393 Sum_probs=21.8
Q ss_pred hHHHHHHHHHHHHHHHHhhhcccCC-CceeccCCCch
Q 045128 12 GQDLENAVKAALEMLQTVEKHGLGE-KKFFNGDNIGL 47 (117)
Q Consensus 12 ~~~~~~~~~~l~~~l~~l~e~~L~~-~~~~~Gd~~t~ 47 (117)
+++......++...|+.+ |+.+.+ -.|..++++++
T Consensus 79 ~~~~~~~l~~~~~~~~~~-e~Rl~~mE~yVTS~~f~l 114 (121)
T TIGR02978 79 GQSPRQALREVKREFRDL-ERRLRNMERYVTSDTFRL 114 (121)
T ss_pred CCCHHHHHHHHHHHHHHH-HHHHHHHHHHhcCCCccH
Confidence 344555666777777777 666653 34666666654
No 79
>PF11732 Thoc2: Transcription- and export-related complex subunit; InterPro: IPR021726 The THO/TREX complex is the transcription- and export-related complex associated with spliceosomes that preferentially deal with spliced mRNAs as opposed to unspliced mRNAs. Thoc2 plays a role in RNA polymerase II (RNA pol II)-dependent transcription and is required for the stability of DNA repeats []. In humans, the TRE complex is comprised of the exon-junction-associated proteins Aly/REF and UAP56 together with the THO proteins THOC1 (hHpr1/p84), Thoc2 (hRlr1), THOC3 (hTex1), THOC5 (fSAP79), THOC6 (fSAP35), and THOC7 (fSAP24). Although much evidence indicates that the function of the TREX complex as an adaptor between the mRNA and components of the export machinery is conserved among eukaryotes, in Drosophila the majority of mRNAs can be exported from the nucleus independently of the THO complex []. This entry represents a conserved domain found towards the N terminus of these proteins.
Probab=24.34 E-value=1.6e+02 Score=17.29 Aligned_cols=43 Identities=16% Similarity=0.291 Sum_probs=25.9
Q ss_pred CceeccCCCchHHHHHHHHHHHHHHHHHHhcCcccCCCCCchHHHHHHHhh
Q 045128 37 KKFFNGDNIGLADLAFGAIAYWLQVLEDVMGVKLFESHKFPSWHEWFENSR 87 (117)
Q Consensus 37 ~~~~~Gd~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~~~~ 87 (117)
-+|| ..+++ |+..++++..+... +...+ .++--++..|++++.
T Consensus 34 ~ky~--t~l~~-DvL~~~ll~~L~~~----~r~~~-k~dg~~~s~Wlq~La 76 (77)
T PF11732_consen 34 LKYF--TDLGY-DVLTFCLLERLSNP----GRSRL-KDDGTNISQWLQSLA 76 (77)
T ss_pred Hhhc--chhhH-HHHHHHHHHHHhcc----cchhc-CcCCCCHHHHHHHHh
Confidence 3465 33443 89988888776421 11112 234478999999875
No 80
>PF10414 CysG_dimeriser: Sirohaem synthase dimerisation region; InterPro: IPR019478 Bacterial sulphur metabolism depends on the iron-containing porphinoid sirohaem. CysG is a multi-functional enzyme with S-adenosyl-L-methionine (SAM)-dependent bismethyltransferase, dehydrogenase and ferrochelatase activities. CysG synthesizes sirohaem from uroporphyrinogen III via reactions which encompass two branchpoint intermediates in tetrapyrrole biosynthesis, diverting flux first from protoporphyrin IX biosynthesis and then from cobalamin (vitamin B12) biosynthesis. CysG is a dimer. Its dimerisation region is 74 residues long, and acts to hold the two structurally similar protomers held together asymmetrically through a number of salt-bridges across complementary residues within the dimerisation region []. CysG dimerisation produces a series of active sites, accounting for CysG's multi-functionality, catalysing four diverse reactions: Two SAM-dependent methylations NAD+-dependent tetrapyrrole dehydrogenation Metal chelation ; GO: 0006779 porphyrin-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1PJT_A 1PJS_A 1PJQ_A.
Probab=21.90 E-value=1.4e+02 Score=16.05 Aligned_cols=17 Identities=24% Similarity=0.247 Sum_probs=7.3
Q ss_pred HHHHHhhccccchhcCC
Q 045128 81 EWFENSRKVPVIEENLP 97 (117)
Q Consensus 81 ~w~~~~~~~p~~~~~~~ 97 (117)
.+++++..-|.......
T Consensus 29 ~FWe~~~~g~~~~~~~~ 45 (60)
T PF10414_consen 29 RFWERFFDGPFAELVLA 45 (60)
T ss_dssp HHHHHHT-HHHHHHHHT
T ss_pred HHHHHHHcCHHHHHHHC
Confidence 35555554444443333
No 81
>COG2879 Uncharacterized small protein [Function unknown]
Probab=21.43 E-value=1.4e+02 Score=16.98 Aligned_cols=14 Identities=29% Similarity=0.667 Sum_probs=7.3
Q ss_pred CCchHHHHHHHhhc
Q 045128 75 KFPSWHEWFENSRK 88 (117)
Q Consensus 75 ~~P~l~~w~~~~~~ 88 (117)
..|.-..|.+.|.+
T Consensus 21 GvpdYdnYVehmr~ 34 (65)
T COG2879 21 GVPDYDNYVEHMRK 34 (65)
T ss_pred CCCcHHHHHHHHHH
Confidence 34445556665554
No 82
>PF14003 YlbE: YlbE-like protein
Probab=21.17 E-value=1.8e+02 Score=16.61 Aligned_cols=21 Identities=29% Similarity=0.460 Sum_probs=14.4
Q ss_pred hhhhhhhc-ChHHHHHHHHHHH
Q 045128 3 AVWKMFFS-TGQDLENAVKAAL 23 (117)
Q Consensus 3 ~~~~~~~~-~~~~~~~~~~~l~ 23 (117)
|.||..++ .++++++-..+..
T Consensus 12 P~WYR~LsR~P~~l~~fe~~a~ 33 (65)
T PF14003_consen 12 PIWYRILSRNPEELEAFEKEAK 33 (65)
T ss_pred cHHHHHHccCHHHHHHHHHHHH
Confidence 78999888 6776665554433
No 83
>PF07182 DUF1402: Protein of unknown function (DUF1402); InterPro: IPR009842 This family consists of several hypothetical bacterial proteins of around 310 residues in length. Members of this family seem to be found exclusively in Agrobacterium, Rhizobium and Brucella species. The function of this family is unknown.
Probab=20.42 E-value=1e+02 Score=22.69 Aligned_cols=22 Identities=18% Similarity=0.386 Sum_probs=16.4
Q ss_pred CceeccCCCchHHHHHHHHHHH
Q 045128 37 KKFFNGDNIGLADLAFGAIAYW 58 (117)
Q Consensus 37 ~~~~~Gd~~t~aDi~l~~~~~~ 58 (117)
+||++|.+|++.-|-=.+.+..
T Consensus 172 QPfyAGQTFGLGQinPLTAL~~ 193 (303)
T PF07182_consen 172 QPFYAGQTFGLGQINPLTALMM 193 (303)
T ss_pred ccccccccccccccChhHHHHH
Confidence 6899999999988854444433
Done!