Query 045129
Match_columns 136
No_of_seqs 106 out of 669
Neff 4.5
Searched_HMMs 13730
Date Mon Mar 25 17:48:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045129.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/045129hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1z3xa2 a.261.1.1 (A:88-235) G 64.0 0.36 2.6E-05 34.6 -1.5 30 31-61 118-147 (148)
2 d1y6ia2 a.261.1.1 (A:83-233) M 62.0 0.43 3.1E-05 34.3 -1.4 30 31-62 118-148 (151)
3 d1nn7a_ d.42.1.2 (A:) Potassiu 55.8 2.6 0.00019 27.5 1.9 58 39-99 3-62 (105)
4 d1unda_ a.14.1.1 (A:) Advillin 54.0 2.3 0.00017 23.6 1.1 18 54-71 1-18 (36)
5 d2bkfa1 d.15.2.2 (A:1-85) Next 51.2 10 0.00075 24.3 4.3 49 41-91 11-68 (85)
6 d3kvta_ d.42.1.2 (A:) akv3.1 v 39.9 5.6 0.00041 25.7 1.5 58 38-99 4-65 (103)
7 d1o51a_ d.58.5.4 (A:) Hypothet 36.4 13 0.00095 24.0 3.0 27 38-70 6-32 (102)
8 d2r85a1 c.30.1.8 (A:1-99) 5-fo 35.3 0.75 5.4E-05 31.1 -3.7 23 30-52 64-88 (99)
9 d1t1da_ d.42.1.2 (A:) Shaker p 32.7 12 0.00086 24.0 2.2 56 40-98 5-63 (100)
10 d1yu5x1 a.14.1.1 (X:10-76) Vil 32.3 7.7 0.00056 24.0 1.2 19 53-71 31-49 (67)
11 d1su3a1 a.20.1.2 (A:32-98) Fib 29.7 21 0.0015 21.5 2.9 57 63-119 2-64 (67)
12 d1fc4a_ c.67.1.4 (A:) 2-amino- 29.0 30 0.0022 26.3 4.5 37 40-76 39-80 (401)
13 d1l6ja1 a.20.1.2 (A:29-105) Ge 28.8 22 0.0016 21.7 3.0 54 64-119 17-74 (77)
14 d1qzpa_ a.14.1.1 (A:) Dematin 28.1 8.1 0.00059 24.0 0.7 19 53-71 32-50 (68)
15 d1ujsa_ a.14.1.1 (A:) Actin-bi 28.1 11 0.00077 24.6 1.3 20 53-72 46-65 (88)
16 d2pbza1 c.30.1.8 (A:4-99) 5-fo 27.4 1.3 9.2E-05 29.8 -3.6 23 30-52 59-83 (96)
17 d1hv2a_ d.42.1.1 (A:) Elongin 25.7 70 0.0051 19.6 6.0 56 37-96 5-62 (99)
18 d1tjya_ c.93.1.1 (A:) AI-2 rec 25.7 26 0.0019 23.9 3.3 32 43-74 1-35 (316)
19 d1yu8x1 a.14.1.1 (X:42-76) Vil 23.2 14 0.001 20.0 1.0 17 55-71 1-17 (35)
20 d2c9wc1 d.42.1.1 (C:17-112) El 23.0 49 0.0036 20.4 4.0 53 43-96 8-62 (96)
21 d2al3a1 d.15.1.2 (A:10-85) Tet 22.8 47 0.0034 20.6 3.8 37 37-75 2-38 (76)
22 d2r7ka1 c.30.1.8 (A:1-123) 5-f 20.3 1.5 0.00011 30.6 -4.5 23 30-52 87-112 (123)
No 1
>d1z3xa2 a.261.1.1 (A:88-235) GUN4-like protein Ycf53 {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=63.96 E-value=0.36 Score=34.59 Aligned_cols=30 Identities=13% Similarity=0.143 Sum_probs=20.7
Q ss_pred ccccCCcEEEEeccCeeeeecccccCchhhH
Q 045129 31 QLAYKGHFVVYTTDQARFLIPLEYLSKRIFR 61 (136)
Q Consensus 31 ~~vpkG~~~VyVGe~~RFvVp~~yLnhp~F~ 61 (136)
..+|+||+|+. +..+-.-|=-..|+||.|.
T Consensus 118 l~AP~GHLP~~-~~lrg~~~~~~~l~h~a~~ 147 (148)
T d1z3xa2 118 LSAPRGHLPLT-NQLRGVQVLNALLNHPAWT 147 (148)
T ss_dssp TTSCTTCCSCC-CCTTCSHHHHHHHTCGGGG
T ss_pred CCCCCCCCCcC-CccchHHHHHHHhcCcccc
Confidence 46899999974 4444444555788888873
No 2
>d1y6ia2 a.261.1.1 (A:83-233) Mg-chelatase cofactor Gun4 {Synechocystis sp. pcc 6803 [TaxId: 1148]}
Probab=62.03 E-value=0.43 Score=34.33 Aligned_cols=30 Identities=13% Similarity=0.229 Sum_probs=19.8
Q ss_pred ccccCCcEEEEecc-CeeeeecccccCchhhHH
Q 045129 31 QLAYKGHFVVYTTD-QARFLIPLEYLSKRIFRE 62 (136)
Q Consensus 31 ~~vpkG~~~VyVGe-~~RFvVp~~yLnhp~F~~ 62 (136)
..+|+||+|+...= +-| +--..|+||.|.+
T Consensus 118 l~AP~GHLP~~~~lrG~~--~~~~l~~h~~~~~ 148 (151)
T d1y6ia2 118 LSAPQGHLPLLNQLRGVR--VAESLYRHPVWSQ 148 (151)
T ss_dssp TTSCTTCCSCCCCTTCTH--HHHHHHTSTHHHH
T ss_pred CCCCCCCCCccchhhhHH--HHHHHHcCcchhh
Confidence 46899999986421 112 3345889999864
No 3
>d1nn7a_ d.42.1.2 (A:) Potassium channel kv4.2 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=55.76 E-value=2.6 Score=27.53 Aligned_cols=58 Identities=19% Similarity=0.099 Sum_probs=38.1
Q ss_pred EEEeccCeeeeeccccc-CchhhHHHHhhhh-hhhccCCCCCeeecCCHHHHHHHHHHHhcCC
Q 045129 39 VVYTTDQARFLIPLEYL-SKRIFREPLKLSE-VEFGLEIDGPITLPCDASFMEYVILFLQRGG 99 (136)
Q Consensus 39 ~VyVGe~~RFvVp~~yL-nhp~F~~LL~~ae-eEfG~~~~G~L~iPCd~~~Fe~vl~~i~~~~ 99 (136)
.+.|| +++|.+..+-| ++|-. +|.... ..+.-+.+|.+-|--|...|++|+..++.+.
T Consensus 3 ~LNVG-G~~f~t~~~TL~~~p~s--~l~~~~~~~~~~~~~~~~FiDRdp~~F~~IL~ylR~G~ 62 (105)
T d1nn7a_ 3 VLNVS-GTRFQTWQDTLERYPDT--LLGSSERDFFYHPETQQYFFDRDPDIFRHILNFYRTGK 62 (105)
T ss_dssp EEEET-TEEEEECHHHHHTSCSS--STTSGGGGGGEEGGGTEEEECSCTTTHHHHHHHHHHSC
T ss_pred EEEEC-CEEEEEeHHHHhcCCCC--CccccccccCcCCCCCcEEEeCCHHHHHHHHHHHhcCc
Confidence 34454 67788877766 34431 122222 2222245799999999999999999999874
No 4
>d1unda_ a.14.1.1 (A:) Advillin {Human (Homo sapiens) [TaxId: 9606]}
Probab=54.04 E-value=2.3 Score=23.64 Aligned_cols=18 Identities=28% Similarity=0.506 Sum_probs=17.0
Q ss_pred ccCchhhHHHHhhhhhhh
Q 045129 54 YLSKRIFREPLKLSEVEF 71 (136)
Q Consensus 54 yLnhp~F~~LL~~aeeEf 71 (136)
||+...|++++.++.+||
T Consensus 1 yLsd~dF~~vFgmsr~eF 18 (36)
T d1unda_ 1 YLSEQDFVSVFGITRGQF 18 (36)
T ss_dssp CCCHHHHHHHHSSCHHHH
T ss_pred CCCHHHHHHHHCcCHHHH
Confidence 799999999999999998
No 5
>d2bkfa1 d.15.2.2 (A:1-85) Next to BRCA1 gene 1 protein, NBR1 (KIAA0049) {Human (Homo sapiens) [TaxId: 9606]}
Probab=51.24 E-value=10 Score=24.34 Aligned_cols=49 Identities=12% Similarity=0.316 Sum_probs=35.7
Q ss_pred EeccCeeeeecccccCchhhHHHHhhhhhhhccC--------CC-CCeeecCCHHHHHHH
Q 045129 41 YTTDQARFLIPLEYLSKRIFREPLKLSEVEFGLE--------ID-GPITLPCDASFMEYV 91 (136)
Q Consensus 41 yVGe~~RFvVp~~yLnhp~F~~LL~~aeeEfG~~--------~~-G~L~iPCd~~~Fe~v 91 (136)
|-||-.||.++. =+++.|.+|..+.+.-||.+ .+ --++|.|++++=|.+
T Consensus 11 f~~dt~RF~ls~--~~~~~~~~L~~~i~~rf~l~~~~lkY~Ddd~e~v~l~~d~dl~E~~ 68 (85)
T d2bkfa1 11 FKNEIQSFLVSD--PENTTWADIEAMVKVSFDLNTIQIKYLDEENEEVSINSQGEYEEAL 68 (85)
T ss_dssp ETTEEEEEEESC--GGGCCHHHHHHHHHHHHTCSSEEEEEECTTSCEEEECSHHHHHHHH
T ss_pred ECCceEEEEecC--CCCCcHHHHHHHHHHhcCcccceEEEEcCCCCEEEEecHHHHHHHH
Confidence 446789998853 25788999999999998853 22 346788988765554
No 6
>d3kvta_ d.42.1.2 (A:) akv3.1 voltage-gated potassium channel {California sea hare (Aplysia californica) [TaxId: 6500]}
Probab=39.88 E-value=5.6 Score=25.66 Aligned_cols=58 Identities=10% Similarity=0.085 Sum_probs=38.9
Q ss_pred EEEEeccCeeeeecccccCc-h--hhHHHHhhhhhhhccC-CCCCeeecCCHHHHHHHHHHHhcCC
Q 045129 38 FVVYTTDQARFLIPLEYLSK-R--IFREPLKLSEVEFGLE-IDGPITLPCDASFMEYVILFLQRGG 99 (136)
Q Consensus 38 ~~VyVGe~~RFvVp~~yLnh-p--~F~~LL~~aeeEfG~~-~~G~L~iPCd~~~Fe~vl~~i~~~~ 99 (136)
+.+-|| +++|.+..+-|.. | .|..+. +....+. .+|.+-|--|...|++||..++.+.
T Consensus 4 I~LNVG-G~~F~t~~~tL~~~~~s~l~~~~---~~~~~~~~~~~~~fiDRdp~~F~~IL~ylR~g~ 65 (103)
T d3kvta_ 4 VIINVG-GIRHETYKATLKKIPATRLSRLT---EGMLNYDPVLNEYFFDRHPGVFAQIINYYRSGK 65 (103)
T ss_dssp EEEEET-TEEEEEEHHHHTTSCSSTTTTCC---TTSTTEETTTTEEEECSCTTTHHHHHHHHHHSC
T ss_pred EEEEEC-CEEEEEeHHHHhhCccchhHHHH---cCCCccCCCCCcEEecCCHHHHHHHHHHHccCC
Confidence 444555 4788887776653 3 332222 2222333 4799999999999999999999874
No 7
>d1o51a_ d.58.5.4 (A:) Hypothetical protein TM0021 {Thermotoga maritima [TaxId: 2336]}
Probab=36.37 E-value=13 Score=23.98 Aligned_cols=27 Identities=15% Similarity=0.219 Sum_probs=22.9
Q ss_pred EEEEeccCeeeeecccccCchhhHHHHhhhhhh
Q 045129 38 FVVYTTDQARFLIPLEYLSKRIFREPLKLSEVE 70 (136)
Q Consensus 38 ~~VyVGe~~RFvVp~~yLnhp~F~~LL~~aeeE 70 (136)
+-+|+++..|+ =+.|+...|++.+.+.
T Consensus 6 LrIy~~e~~~~------~g~pl~~~iv~~ar~~ 32 (102)
T d1o51a_ 6 LKIYLGEKDKH------SGKPLFEYLVKRAYEL 32 (102)
T ss_dssp EEEEEETTCEE------TTEEHHHHHHHHHHHT
T ss_pred EEEEEcchhcC------CceEHHHHHHHHHHHC
Confidence 57899988775 5889999999999973
No 8
>d2r85a1 c.30.1.8 (A:1-99) 5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP {Pyrococcus furiosus [TaxId: 2261]}
Probab=35.33 E-value=0.75 Score=31.11 Aligned_cols=23 Identities=22% Similarity=0.345 Sum_probs=17.6
Q ss_pred cccccCCcEEEEec-cC-eeeeecc
Q 045129 30 AQLAYKGHFVVYTT-DQ-ARFLIPL 52 (136)
Q Consensus 30 ~~~vpkG~~~VyVG-e~-~RFvVp~ 52 (136)
..-||.|.|++|+| |+ +.|-||+
T Consensus 64 ~I~IPhgSfv~Y~G~d~ie~~~VP~ 88 (99)
T d2r85a1 64 AVVVPTGSFVAHLGIELVENMKVPY 88 (99)
T ss_dssp EEECCCTTHHHHHCHHHHHTCCSCB
T ss_pred EEEecCCCEEEEEcHHHHhcCCCCc
Confidence 46799999999999 31 3477774
No 9
>d1t1da_ d.42.1.2 (A:) Shaker potassium channel {California sea hare (Aplysia californica) [TaxId: 6500]}
Probab=32.68 E-value=12 Score=23.99 Aligned_cols=56 Identities=16% Similarity=0.296 Sum_probs=35.9
Q ss_pred EEeccCeeeeecccccCc-h--hhHHHHhhhhhhhccCCCCCeeecCCHHHHHHHHHHHhcC
Q 045129 40 VYTTDQARFLIPLEYLSK-R--IFREPLKLSEVEFGLEIDGPITLPCDASFMEYVILFLQRG 98 (136)
Q Consensus 40 VyVGe~~RFvVp~~yLnh-p--~F~~LL~~aeeEfG~~~~G~L~iPCd~~~Fe~vl~~i~~~ 98 (136)
+-|| +++|.+..+-|.. | .|..|.... .+--+.+|.+-|--|...|++||..++.+
T Consensus 5 LNVG-G~~f~t~~~tL~~~p~s~l~~l~~~~--~~~~~~~g~~FiDRdp~~F~~IL~flR~~ 63 (100)
T d1t1da_ 5 INVS-GLRFETQLKTLNQFPDTLLGNPQKRN--RYYDPLRNEYFFDRNRPSFDAILYFYQSG 63 (100)
T ss_dssp EEET-TEEEEEEHHHHHTSTTSTTTCHHHHG--GGEETTTTEEEECSCSTTHHHHHHHHHTT
T ss_pred EEEC-CEEEEEeHHHHhhCCCchhHHHHhCC--CcCCCCCCeEEEecCHHHHHHHHHHHhcC
Confidence 4444 5777777665543 3 333332211 11124579999999999999999999864
No 10
>d1yu5x1 a.14.1.1 (X:10-76) Villin {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=32.29 E-value=7.7 Score=24.03 Aligned_cols=19 Identities=21% Similarity=0.378 Sum_probs=18.1
Q ss_pred cccCchhhHHHHhhhhhhh
Q 045129 53 EYLSKRIFREPLKLSEVEF 71 (136)
Q Consensus 53 ~yLnhp~F~~LL~~aeeEf 71 (136)
.||+.-.|++++.++.+||
T Consensus 31 ~yLsd~dF~~vFgms~~eF 49 (67)
T d1yu5x1 31 NHLSDEDFKAVFGMTRSAF 49 (67)
T ss_dssp GGSCHHHHHHHHSSCHHHH
T ss_pred hhCCHHHHHHHHCcCHHHH
Confidence 5999999999999999998
No 11
>d1su3a1 a.20.1.2 (A:32-98) Fibroblast collagenase (MMP-1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.66 E-value=21 Score=21.45 Aligned_cols=57 Identities=4% Similarity=-0.161 Sum_probs=35.9
Q ss_pred HHhhhhhhhccCCC--CCeeecCCHHHHHHHHHHHhc----CCchhHHHHHHhhhccCCCCCC
Q 045129 63 PLKLSEVEFGLEID--GPITLPCDASFMEYVILFLQR----GGDKNVETFLLMSVVTSCDSSQ 119 (136)
Q Consensus 63 LL~~aeeEfG~~~~--G~L~iPCd~~~Fe~vl~~i~~----~~~~~~~~~~l~~~~~~~c~~~ 119 (136)
|.+.-=+.|||-.. ....-.-+...++..|+.+++ ..+..++.+++.-|..+||.+.
T Consensus 2 l~~~YL~~fgyl~~~~~~~~~~~~~~~~~~Aik~fQ~f~~L~~TG~lD~~T~~~M~~PRCGvp 64 (67)
T d1su3a1 2 LVQKYLEKYYNLKNDGRQVEKRRNSGPVVEKLKQMQEFFGLKVTGKPDAETLKVMKQPRCGVP 64 (67)
T ss_dssp HHHHHHHHHSCCC------------CHHHHHHHHHHHHTTCCCCSSCCHHHHHHHTSCBCSSC
T ss_pred HHHHHHHHhCCCCCCccccccccchHHHHHHHHHHHHHcCCCcccccCHHHHHHHCCCCCCCC
Confidence 34444467888631 222222356678888877777 5778889999999999999863
No 12
>d1fc4a_ c.67.1.4 (A:) 2-amino-3-ketobutyrate CoA ligase {Escherichia coli [TaxId: 562]}
Probab=28.99 E-value=30 Score=26.34 Aligned_cols=37 Identities=14% Similarity=0.186 Sum_probs=27.8
Q ss_pred EEeccCeeeee--ccccc---CchhhHHHHhhhhhhhccCCC
Q 045129 40 VYTTDQARFLI--PLEYL---SKRIFREPLKLSEVEFGLEID 76 (136)
Q Consensus 40 VyVGe~~RFvV--p~~yL---nhp~F~~LL~~aeeEfG~~~~ 76 (136)
|++.|.++|+= --+|| +||.+++...++-+.||....
T Consensus 39 v~~~dG~~~l~f~s~dYLGl~~hp~v~~a~~~a~~~~g~~~~ 80 (401)
T d1fc4a_ 39 ITVADGSHVINFCANNYLGLANHPDLIAAAKAGMDSHGFGMA 80 (401)
T ss_dssp EEBTTSCEEEECCCSCTTSCTTCHHHHHHHHHHHHHHCSCCC
T ss_pred EEecCCCEEEEEEccccccccCCHHHHHHHHHHHHHhCCCcc
Confidence 45567788762 33566 499999999999999997543
No 13
>d1l6ja1 a.20.1.2 (A:29-105) Gelatinase B (MMP-9) {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.76 E-value=22 Score=21.72 Aligned_cols=54 Identities=11% Similarity=0.102 Sum_probs=32.3
Q ss_pred HhhhhhhhccCCCCCeeecCCHHHHHHHHHHHhc----CCchhHHHHHHhhhccCCCCCC
Q 045129 64 LKLSEVEFGLEIDGPITLPCDASFMEYVILFLQR----GGDKNVETFLLMSVVTSCDSSQ 119 (136)
Q Consensus 64 L~~aeeEfG~~~~G~L~iPCd~~~Fe~vl~~i~~----~~~~~~~~~~l~~~~~~~c~~~ 119 (136)
.+.--+.|||-.... -......|+..|..+++ ..+..++.+++.-|.++||.+.
T Consensus 17 a~~yL~~fGYl~~~~--~~~~~~~~~~AIk~fQ~f~gL~vTG~lD~~T~~~M~~pRCG~p 74 (77)
T d1l6ja1 17 AEEYLYRYGYTRVAE--MRGESKSLGPALLLLQKQLSLPETGELDSATLKAMRTPRCGVP 74 (77)
T ss_dssp HHHHHHHTTCC-------------CHHHHHHHHHHHTCCCCSSCCHHHHHHHTSCBCSSC
T ss_pred HHHHHHHcCCCCCCC--cccchHHHHHHHHHHHHHcCCCCCCCcCHHHHHHHccCCCCCC
Confidence 334445688863211 12445566777766666 5778889999999999999863
No 14
>d1qzpa_ a.14.1.1 (A:) Dematin {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.12 E-value=8.1 Score=24.00 Aligned_cols=19 Identities=32% Similarity=0.366 Sum_probs=18.1
Q ss_pred cccCchhhHHHHhhhhhhh
Q 045129 53 EYLSKRIFREPLKLSEVEF 71 (136)
Q Consensus 53 ~yLnhp~F~~LL~~aeeEf 71 (136)
.||+.-.|.+++.|+.+||
T Consensus 32 ~yLsd~dF~~vFgms~~eF 50 (68)
T d1qzpa_ 32 RHLSAEDFSRVFAMSPEEF 50 (68)
T ss_dssp GGBCHHHHHHHSSSCHHHH
T ss_pred hhCCHHHHHHHHCcCHHHH
Confidence 6999999999999999998
No 15
>d1ujsa_ a.14.1.1 (A:) Actin-binding LIM protein homologue KIAA0843 {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.10 E-value=11 Score=24.62 Aligned_cols=20 Identities=25% Similarity=0.350 Sum_probs=18.5
Q ss_pred cccCchhhHHHHhhhhhhhc
Q 045129 53 EYLSKRIFREPLKLSEVEFG 72 (136)
Q Consensus 53 ~yLnhp~F~~LL~~aeeEfG 72 (136)
.||+.-.|++++.|+.+||-
T Consensus 46 ~YLSdedF~~vFgMsr~eF~ 65 (88)
T d1ujsa_ 46 RHLSQEEFYQVFGMTISEFD 65 (88)
T ss_dssp GGSCTTHHHHHHSSCHHHHT
T ss_pred hcCCHHHHHHHHCcCHHHHH
Confidence 59999999999999999983
No 16
>d2pbza1 c.30.1.8 (A:4-99) 5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP {Thermococcus kodakaraensis [TaxId: 311400]}
Probab=27.44 E-value=1.3 Score=29.79 Aligned_cols=23 Identities=17% Similarity=0.287 Sum_probs=17.2
Q ss_pred cccccCCcEEEEec-c-Ceeeeecc
Q 045129 30 AQLAYKGHFVVYTT-D-QARFLIPL 52 (136)
Q Consensus 30 ~~~vpkG~~~VyVG-e-~~RFvVp~ 52 (136)
..-||.|.|++|+| | =+.+-||+
T Consensus 59 aI~IPhgSfv~Y~G~~~ie~~~VP~ 83 (96)
T d2pbza1 59 GIVVPHGSFVAYLGIEAIEKAKARF 83 (96)
T ss_dssp SBCCCBTTHHHHSCHHHHHTCCSCC
T ss_pred eEEEcCCCEEEEecHHHHhhCCCCc
Confidence 46799999999999 3 23466663
No 17
>d1hv2a_ d.42.1.1 (A:) Elongin C {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=25.71 E-value=70 Score=19.65 Aligned_cols=56 Identities=16% Similarity=0.218 Sum_probs=42.3
Q ss_pred cEEEEeccCeeeeecccccC-chhhHHHHhhhhhhhccCCCCCeeec-CCHHHHHHHHHHHh
Q 045129 37 HFVVYTTDQARFLIPLEYLS-KRIFREPLKLSEVEFGLEIDGPITLP-CDASFMEYVILFLQ 96 (136)
Q Consensus 37 ~~~VyVGe~~RFvVp~~yLn-hp~F~~LL~~aeeEfG~~~~G~L~iP-Cd~~~Fe~vl~~i~ 96 (136)
++-....|+..|.|+.+-.. .+.++.+|+ ..|.+.+++|.+| =+...++.|+..++
T Consensus 5 ~v~L~SsDg~~f~V~~~~A~~S~tI~~ml~----~~~~e~~~~Ipl~~V~s~iL~kViey~~ 62 (99)
T d1hv2a_ 5 FVTLVSKDDKEYEISRSAAMISPTLKAMIE----GPFRESKGRIELKQFDSHILEKAVEYLN 62 (99)
T ss_dssp EEEEEETTTEEEEEEHHHHTTCHHHHHHHH----SSTTTCTTEEEETTSCHHHHHHHHHHHH
T ss_pred eEEEEcCCCCEEEeeHHHHHHhHHHHHHHH----ccCCCCcCccccCCCChHHHHHHHHHHH
Confidence 45555678999999987665 467777775 3455567889887 89999999998775
No 18
>d1tjya_ c.93.1.1 (A:) AI-2 receptor LsrB {Salmonella typhi [TaxId: 90370]}
Probab=25.67 E-value=26 Score=23.85 Aligned_cols=32 Identities=9% Similarity=0.123 Sum_probs=22.9
Q ss_pred ccCeeeeecccccCchhhHHHHhhh---hhhhccC
Q 045129 43 TDQARFLIPLEYLSKRIFREPLKLS---EVEFGLE 74 (136)
Q Consensus 43 Ge~~RFvVp~~yLnhp~F~~LL~~a---eeEfG~~ 74 (136)
|..+|..+=+..++||.|..+.+-+ .+++||+
T Consensus 1 G~~~kI~~i~~~~~npf~~~~~~g~~~~a~~~G~~ 35 (316)
T d1tjya_ 1 GSAERIAFIPKLVGVGFFTSGGNGAQEAGKALGID 35 (316)
T ss_dssp CCCCEEEEECSSSSSHHHHHHHHHHHHHHHHHTCE
T ss_pred CCCCEEEEEeCCCCCHHHHHHHHHHHHHHHHcCCE
Confidence 3456666667799999999886555 5577774
No 19
>d1yu8x1 a.14.1.1 (X:42-76) Villin {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=23.16 E-value=14 Score=20.04 Aligned_cols=17 Identities=24% Similarity=0.448 Sum_probs=14.5
Q ss_pred cCchhhHHHHhhhhhhh
Q 045129 55 LSKRIFREPLKLSEVEF 71 (136)
Q Consensus 55 Lnhp~F~~LL~~aeeEf 71 (136)
|+...|++++.++.+||
T Consensus 1 Lsd~dF~~vfgmsr~eF 17 (35)
T d1yu8x1 1 LSDEDFKAVFGMTRSAF 17 (35)
T ss_dssp SCHHHHHHHHSSCHHHH
T ss_pred CCHHHHHHHHCCCHHHH
Confidence 56678999999999988
No 20
>d2c9wc1 d.42.1.1 (C:17-112) Elongin C {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.02 E-value=49 Score=20.44 Aligned_cols=53 Identities=11% Similarity=0.213 Sum_probs=34.2
Q ss_pred ccCeeeeecccccC-chhhHHHHhhhhhhhccCCCCCeeec-CCHHHHHHHHHHHh
Q 045129 43 TDQARFLIPLEYLS-KRIFREPLKLSEVEFGLEIDGPITLP-CDASFMEYVILFLQ 96 (136)
Q Consensus 43 Ge~~RFvVp~~yLn-hp~F~~LL~~aeeEfG~~~~G~L~iP-Cd~~~Fe~vl~~i~ 96 (136)
.|+.+|.|+.+... .+.++.+|+... .++=..+++|.|| =+...++.|+..+.
T Consensus 8 sDg~~f~V~~~~A~~S~tI~~ml~~~~-~~~e~~~~~IpL~nV~s~iL~kViey~~ 62 (96)
T d2c9wc1 8 SDGHEFIVKREHALTSGTIKAMLSGPG-QFAENETNEVNFREIPSHVLSKVCMYFT 62 (96)
T ss_dssp TTCCEEEEEHHHHTTSHHHHHC-------------CEEECTTCCHHHHHHHHHHHH
T ss_pred CCCCEEEeeHHHHHHhHHHHHHHhccC-ccccCCCCeeECCCCCHHHHHHHHHHHH
Confidence 58999999998875 568888886432 1121346788887 58899999997775
No 21
>d2al3a1 d.15.1.2 (A:10-85) Tether containing UBX domain for GLUT4 (Tug) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=22.82 E-value=47 Score=20.65 Aligned_cols=37 Identities=8% Similarity=0.056 Sum_probs=28.7
Q ss_pred cEEEEeccCeeeeecccccCchhhHHHHhhhhhhhccCC
Q 045129 37 HFVVYTTDQARFLIPLEYLSKRIFREPLKLSEVEFGLEI 75 (136)
Q Consensus 37 ~~~VyVGe~~RFvVp~~yLnhp~F~~LL~~aeeEfG~~~ 75 (136)
++.|..-..+|..|++.= .-...+.|++|=+.|||+.
T Consensus 2 ~V~Vl~~~~rR~~VKvtP--~t~l~~VL~eaC~k~~~~~ 38 (76)
T d2al3a1 2 AVSVLAPNGRRHTVKVTP--STVLLQVLEDTCRRQDFNP 38 (76)
T ss_dssp CEEEECTTSCEEEECCCT--TSBHHHHHHHHHHHTTCCG
T ss_pred cEEEECCCCcEEEEEeCC--CcCHHHHHHHHHHHhCCCh
Confidence 456666678999998753 3477889999999999974
No 22
>d2r7ka1 c.30.1.8 (A:1-123) 5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP {Methanocaldococcus jannaschii [TaxId: 2190]}
Probab=20.32 E-value=1.5 Score=30.58 Aligned_cols=23 Identities=30% Similarity=0.751 Sum_probs=18.2
Q ss_pred cccccCCcEEEEec-c--Ceeeeecc
Q 045129 30 AQLAYKGHFVVYTT-D--QARFLIPL 52 (136)
Q Consensus 30 ~~~vpkG~~~VyVG-e--~~RFvVp~ 52 (136)
..-||.|.|++|+| | .+.|-||+
T Consensus 87 ~I~IPhgSfv~Y~G~~~ie~~~~VP~ 112 (123)
T d2r7ka1 87 SIVVPHGSFIAYCGLDNVENSFLVPM 112 (123)
T ss_dssp EEECCBHHHHHHHCHHHHHHTCCSCB
T ss_pred EEEecCCCeeeeecHHHHHhcCCCCe
Confidence 46799999999999 4 25688884
Done!