BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045131
(107 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O49813|OLEE1_BETPN Olee1-like protein OS=Betula pendula PE=2 SV=1
Length = 166
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 54/110 (49%), Positives = 76/110 (69%), Gaps = 6/110 (5%)
Query: 1 ATVALECKESEGGEVVYSREVVSDQSGTYKIPIEGCH-AKLCQVRLVKSPKPECSEIVAD 59
A V+LEC+ EGG ++YS + +D+SGTY+IP++G H ++C++ L KS P+CSE+ D
Sbjct: 53 AKVSLECRNREGGTLIYSSDSETDKSGTYRIPVDGDHEEEICEIALKKSSDPDCSEVSKD 112
Query: 60 GL--SSARIDLTPSVG-SDPELIRYANDLGFMKKESLPECAKVLEEMFIH 106
SARI LT + G S P +R AN LGFMKK+ LPECAK L E+ ++
Sbjct: 113 PFLKKSARISLTKNNGISTP--VRLANPLGFMKKKPLPECAKALRELGMN 160
>sp|Q8LGR0|CHE1_CHEAL Pollen allergen Che a 1 OS=Chenopodium album PE=1 SV=1
Length = 168
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 66/109 (60%), Gaps = 4/109 (3%)
Query: 1 ATVALECKESEGGEVVYSREVVSDQSGTYKIPIEG-CHAKLCQVRLVKSPKPECSEIVAD 59
ATV LEC+ G + E V+D+ G Y IP+ G +C++ LVKSP ECSE+ D
Sbjct: 56 ATVKLECRNITAGTQTFKAEAVTDKVGQYSIPVNGDFEDDICEIELVKSPNSECSEVSHD 115
Query: 60 --GLSSARIDLTPSVGSDPELIRYANDLGFMKKESLPECAKVLEEMFIH 106
SA++ LT + G + IR AN LGFM+KE L EC +VL+E+ ++
Sbjct: 116 VYAKQSAKVSLTSNNGEASD-IRSANALGFMRKEPLKECPEVLKELDLY 163
>sp|Q7M1X5|LOLB_LOLPR Major pollen allergen Lol p 11 OS=Lolium perenne PE=1 SV=1
Length = 134
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Query: 1 ATVALECKESEGGEVVYSREVVSDQSGTYKIPIEGCHAK-LCQVRLVKSPKPECSEIVAD 59
ATVA++C+ +GGE E +D+ G YKI I+ H + +C+V L KSP CSEI +
Sbjct: 32 ATVAVDCRPFDGGESKLKAEATTDKDGWYKIEIDQDHQEEICEVVLAKSPDKSCSEI-EE 90
Query: 60 GLSSARIDLTPSVGSDPELIRYANDLGFMKKESLPECAKVLE 101
AR+ LT + G + IRYAN + F +KE L EC +L+
Sbjct: 91 FRDRARVPLTSNXGIKQQGIRYANPIAFFRKEPLKECGGILQ 132
>sp|Q8H6L7|PHLB_PHLPR Pollen allergen Phl p 11 OS=Phleum pratense PE=1 SV=1
Length = 143
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 59/102 (57%), Gaps = 2/102 (1%)
Query: 1 ATVALECKESEGGEVVYSREVVSDQSGTYKIPIEGCHAK-LCQVRLVKSPKPECSEIVAD 59
ATVA++C+ GGE E +D G YKI I+ H + +C+V L KSP CSEI +
Sbjct: 32 ATVAVDCRPFNGGESKLKAEATTDGLGWYKIEIDQDHQEEICEVVLAKSPDTTCSEI-EE 90
Query: 60 GLSSARIDLTPSVGSDPELIRYANDLGFMKKESLPECAKVLE 101
AR+ LT + G + IRYAN + F +KE L EC +L+
Sbjct: 91 FRDRARVPLTSNNGIKQQGIRYANPIAFFRKEPLKECGGILQ 132
>sp|P13447|LAT52_SOLLC Anther-specific protein LAT52 OS=Solanum lycopersicum GN=LAT52 PE=2
SV=1
Length = 161
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
Query: 1 ATVALECKESEGGEVVYSREVVSDQSGTYKIPIEGCHAK-LCQVRLVKSPKPECSEIVAD 59
ATV L+C+ +S E V+D+ G YK+ + G H +C+V +VKSP+ +C E V+
Sbjct: 53 ATVKLQCRNISTEAETFSVEGVTDKDGKYKLTVNGDHENDICEVTVVKSPREDCKESVS- 111
Query: 60 GLSSARIDLTPSVGSDPELIRYANDLGFMKKESLPECAKVLEEM 103
G ARI+ + +VG +R+AN L FMK ES+ C + L+E+
Sbjct: 112 GYEKARIECSDNVGIH-NAVRFANPLFFMKAESVQGCKEALDEL 154
>sp|P19963|ALL1_OLEEU Major pollen allergen Ole e 1 OS=Olea europaea PE=1 SV=2
Length = 145
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 61/109 (55%), Gaps = 7/109 (6%)
Query: 1 ATVALECKESEGGEVVYSREVVSDQSGTYKIPIEGCHAK-LCQVRLVKSPKPECSEIVAD 59
A++ L+CK+ E G+V ++ + G Y + +E H C++ L+ S + +C+EI +
Sbjct: 37 ASLRLQCKDKENGDVTFTEVGYTRAEGLYSMLVERDHKNEFCEITLISSGRKDCNEIPTE 96
Query: 60 GLS--SARIDLTPSVGSDPELIRYANDLGFMKKESLPECAKVLEEMFIH 106
G + S + L G+ R N LGF KKE+LP+CA+V ++ ++
Sbjct: 97 GWAKPSLKFKLNTVNGT----TRTVNPLGFFKKEALPKCAQVYNKLGMY 141
>sp|P33050|PSC13_MAIZE Pollen-specific protein C13 OS=Zea mays GN=MGS1 PE=2 SV=1
Length = 170
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 1 ATVALECKESEGGEVVYSREVVSDQSGTYKIPIEGCHAK-LCQVRLVKSPKPECSEIVAD 59
A V LECK G++ + + V+D +GTY I ++ H + +CQV LV SP+ +C E+ A
Sbjct: 61 AKVRLECKHFGTGKLERAIDGVTDATGTYTIELKDSHEEDICQVVLVASPRKDCDEVQA- 119
Query: 60 GLSSARIDLTPSVGSDPELIRYANDLGFMKKESLPECAKVLEEM 103
A + LT +VG L R AN LG+ K LP CA +L+++
Sbjct: 120 LRDRAGVLLTRNVGISDSL-RPANPLGYFKDVPLPVCAALLKQL 162
>sp|O82015|LIGV1_LIGVU Major pollen allergen Lig v 1 OS=Ligustrum vulgare PE=1 SV=2
Length = 145
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 57/109 (52%), Gaps = 7/109 (6%)
Query: 1 ATVALECKESEGGEVVYSREVVSDQSGTYKIPIEGCHAK-LCQVRLVKSPKPECSEIVAD 59
A V L+CK+ E G+V ++ + G Y + IE H C++ L+ S + +C EI +
Sbjct: 37 AGVRLQCKDGENGKVTFTEVGYTKAEGLYNMLIERDHKNEFCEITLISSSRKDCDEIPTE 96
Query: 60 GL--SSARIDLTPSVGSDPELIRYANDLGFMKKESLPECAKVLEEMFIH 106
G S + L G+ R N LGF+KKE LP+C +V ++ ++
Sbjct: 97 GWVKPSLKFVLNTVNGT----TRTINPLGFLKKEVLPKCPQVFNKLGMY 141
>sp|P82242|PLAL1_PLALA Major pollen allergen Pla l 1 OS=Plantago lanceolata PE=1 SV=2
Length = 131
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 60/99 (60%), Gaps = 6/99 (6%)
Query: 1 ATVALECKESEGGEVVYSREVVSDQSGTYKIPIEGCHAKLCQVRLVKSPKPECSEI--VA 58
A V L+CK+ + +V+YS +DQ G Y++P+ G H C+++LVKS +P+CSEI +A
Sbjct: 36 AQVQLDCKD-DSKKVIYSIGGETDQDGVYRLPVVGYHED-CEIKLVKSSRPDCSEIPKLA 93
Query: 59 DG-LSSARIDLTPSVGSDPELIRYANDLGFMKKESLPEC 96
G + ++++DL+ + + E R+ L F K P C
Sbjct: 94 KGTIQTSKVDLSKNT-TITEKTRHVKPLSFRAKTDAPGC 131
>sp|P0C0C9|OTCC_STRPY Ornithine carbamoyltransferase, catabolic (Fragment)
OS=Streptococcus pyogenes GN=arcB PE=3 SV=2
Length = 107
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 5/44 (11%)
Query: 61 LSSARIDLTPSVGSDPELIRYANDLGFMKKESLPECAKVLEEMF 104
++A IDL G+ PE + AND+ KKES + AKVL MF
Sbjct: 64 FTTAAIDL----GAHPEYLG-ANDIQLGKKESTEDTAKVLGRMF 102
>sp|C1CU67|OTC_STRZT Ornithine carbamoyltransferase OS=Streptococcus pneumoniae (strain
Taiwan19F-14) GN=arcB PE=3 SV=1
Length = 338
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 5/45 (11%)
Query: 60 GLSSARIDLTPSVGSDPELIRYANDLGFMKKESLPECAKVLEEMF 104
++A IDL G+ PE + AND+ KKES + AKVL MF
Sbjct: 64 AFTTAAIDL----GAHPEYLG-ANDIQLGKKESTEDTAKVLGRMF 103
>sp|C1CHE7|OTC_STRZJ Ornithine carbamoyltransferase OS=Streptococcus pneumoniae (strain
JJA) GN=arcB PE=3 SV=1
Length = 338
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 5/45 (11%)
Query: 60 GLSSARIDLTPSVGSDPELIRYANDLGFMKKESLPECAKVLEEMF 104
++A IDL G+ PE + AND+ KKES + AKVL MF
Sbjct: 64 AFTTAAIDL----GAHPEYLG-ANDIQLGKKESTEDTAKVLGRMF 103
>sp|B9DUY9|OTC_STRU0 Ornithine carbamoyltransferase OS=Streptococcus uberis (strain ATCC
BAA-854 / 0140J) GN=arcB PE=3 SV=1
Length = 337
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 5/45 (11%)
Query: 60 GLSSARIDLTPSVGSDPELIRYANDLGFMKKESLPECAKVLEEMF 104
++A IDL G+ PE + AND+ KKES + AKVL MF
Sbjct: 63 AFTTAAIDL----GAHPEYLG-ANDIQLGKKESTEDTAKVLGRMF 102
>sp|C0MD77|OTC_STRS7 Ornithine carbamoyltransferase OS=Streptococcus equi subsp.
zooepidemicus (strain H70) GN=arcB PE=3 SV=1
Length = 337
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 5/45 (11%)
Query: 60 GLSSARIDLTPSVGSDPELIRYANDLGFMKKESLPECAKVLEEMF 104
++A IDL G+ PE + AND+ KKES + AKVL MF
Sbjct: 63 AFTTAAIDL----GAHPEYLG-ANDIQLGKKESTEDTAKVLGRMF 102
>sp|B2INH0|OTC_STRPS Ornithine carbamoyltransferase OS=Streptococcus pneumoniae (strain
CGSP14) GN=arcB PE=3 SV=1
Length = 338
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 5/45 (11%)
Query: 60 GLSSARIDLTPSVGSDPELIRYANDLGFMKKESLPECAKVLEEMF 104
++A IDL G+ PE + AND+ KKES + AKVL MF
Sbjct: 64 AFTTAAIDL----GAHPEYLG-ANDIQLGKKESTEDTAKVLGRMF 103
>sp|B8ZPY8|OTC_STRPJ Ornithine carbamoyltransferase OS=Streptococcus pneumoniae (strain
ATCC 700669 / Spain 23F-1) GN=arcB PE=3 SV=1
Length = 338
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 5/45 (11%)
Query: 60 GLSSARIDLTPSVGSDPELIRYANDLGFMKKESLPECAKVLEEMF 104
++A IDL G+ PE + AND+ KKES + AKVL MF
Sbjct: 64 AFTTAAIDL----GAHPEYLG-ANDIQLGKKESTEDTAKVLGRMF 103
>sp|B1I9W1|OTC_STRPI Ornithine carbamoyltransferase OS=Streptococcus pneumoniae (strain
Hungary19A-6) GN=arcB PE=3 SV=1
Length = 338
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 5/45 (11%)
Query: 60 GLSSARIDLTPSVGSDPELIRYANDLGFMKKESLPECAKVLEEMF 104
++A IDL G+ PE + AND+ KKES + AKVL MF
Sbjct: 64 AFTTAAIDL----GAHPEYLG-ANDIQLGKKESTEDTAKVLGRMF 103
>sp|C1CAZ4|OTC_STRP7 Ornithine carbamoyltransferase OS=Streptococcus pneumoniae (strain
70585) GN=arcB PE=3 SV=1
Length = 338
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 5/45 (11%)
Query: 60 GLSSARIDLTPSVGSDPELIRYANDLGFMKKESLPECAKVLEEMF 104
++A IDL G+ PE + AND+ KKES + AKVL MF
Sbjct: 64 AFTTAAIDL----GAHPEYLG-ANDIQLGKKESTEDTAKVLGRMF 103
>sp|B5E3F8|OTC_STRP4 Ornithine carbamoyltransferase OS=Streptococcus pneumoniae serotype
19F (strain G54) GN=arcB PE=3 SV=1
Length = 338
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 5/45 (11%)
Query: 60 GLSSARIDLTPSVGSDPELIRYANDLGFMKKESLPECAKVLEEMF 104
++A IDL G+ PE + AND+ KKES + AKVL MF
Sbjct: 64 AFTTAAIDL----GAHPEYLG-ANDIQLGKKESTEDTAKVLGRMF 103
>sp|Q04I25|OTC_STRP2 Ornithine carbamoyltransferase OS=Streptococcus pneumoniae serotype
2 (strain D39 / NCTC 7466) GN=arcB PE=3 SV=1
Length = 338
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 5/45 (11%)
Query: 60 GLSSARIDLTPSVGSDPELIRYANDLGFMKKESLPECAKVLEEMF 104
++A IDL G+ PE + AND+ KKES + AKVL MF
Sbjct: 64 AFTTAAIDL----GAHPEYLG-ANDIQLGKKESTEDTAKVLGRMF 103
>sp|B4U1S2|OTC_STREM Ornithine carbamoyltransferase OS=Streptococcus equi subsp.
zooepidemicus (strain MGCS10565) GN=arcB PE=3 SV=1
Length = 337
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 5/45 (11%)
Query: 60 GLSSARIDLTPSVGSDPELIRYANDLGFMKKESLPECAKVLEEMF 104
++A IDL G+ PE + AND+ KKES + AKVL MF
Sbjct: 63 AFTTAAIDL----GAHPEYLG-ANDIQLGKKESTEDTAKVLGRMF 102
>sp|C0MBK6|OTC_STRE4 Ornithine carbamoyltransferase OS=Streptococcus equi subsp. equi
(strain 4047) GN=arcB PE=3 SV=1
Length = 337
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 5/45 (11%)
Query: 60 GLSSARIDLTPSVGSDPELIRYANDLGFMKKESLPECAKVLEEMF 104
++A IDL G+ PE + AND+ KKES + AKVL MF
Sbjct: 63 AFTTAAIDL----GAHPEYLG-ANDIQLGKKESTEDTAKVLGRMF 102
>sp|P65608|OTCC_STRR6 Ornithine carbamoyltransferase, catabolic OS=Streptococcus
pneumoniae (strain ATCC BAA-255 / R6) GN=arcB PE=3 SV=1
Length = 338
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 5/45 (11%)
Query: 60 GLSSARIDLTPSVGSDPELIRYANDLGFMKKESLPECAKVLEEMF 104
++A IDL G+ PE + AND+ KKES + AKVL MF
Sbjct: 64 AFTTAAIDL----GAHPEYLG-ANDIQLGKKESTEDTAKVLGRMF 103
>sp|P65607|OTCC_STRPN Ornithine carbamoyltransferase, catabolic OS=Streptococcus
pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)
GN=arcB PE=3 SV=1
Length = 338
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 5/45 (11%)
Query: 60 GLSSARIDLTPSVGSDPELIRYANDLGFMKKESLPECAKVLEEMF 104
++A IDL G+ PE + AND+ KKES + AKVL MF
Sbjct: 64 AFTTAAIDL----GAHPEYLG-ANDIQLGKKESTEDTAKVLGRMF 103
>sp|Q8RP83|OTCC_STRAG Ornithine carbamoyltransferase, catabolic OS=Streptococcus
agalactiae GN=arcB PE=3 SV=1
Length = 337
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 5/45 (11%)
Query: 60 GLSSARIDLTPSVGSDPELIRYANDLGFMKKESLPECAKVLEEMF 104
++A IDL G+ PE + AND+ KKES + AKVL MF
Sbjct: 63 AFTTAAIDL----GAHPEYLG-ANDIQLGKKESTEDTAKVLGRMF 102
>sp|P65606|OTCC2_STRA5 Ornithine carbamoyltransferase 2, catabolic OS=Streptococcus
agalactiae serotype V (strain ATCC BAA-611 / 2603 V/R)
GN=arcB2 PE=3 SV=1
Length = 337
Score = 32.0 bits (71), Expect = 1.3, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 5/45 (11%)
Query: 60 GLSSARIDLTPSVGSDPELIRYANDLGFMKKESLPECAKVLEEMF 104
++A IDL G+ PE + AND+ KKES + AKVL MF
Sbjct: 63 AFTTAAIDL----GAHPEYLG-ANDIQLGKKESTEDTAKVLGRMF 102
>sp|P65605|OTCC2_STRA3 Ornithine carbamoyltransferase 2, catabolic OS=Streptococcus
agalactiae serotype III (strain NEM316) GN=arcB2 PE=3
SV=1
Length = 337
Score = 32.0 bits (71), Expect = 1.3, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 5/45 (11%)
Query: 60 GLSSARIDLTPSVGSDPELIRYANDLGFMKKESLPECAKVLEEMF 104
++A IDL G+ PE + AND+ KKES + AKVL MF
Sbjct: 63 AFTTAAIDL----GAHPEYLG-ANDIQLGKKESTEDTAKVLGRMF 102
>sp|P0C0D0|OTCC_STRP1 Ornithine carbamoyltransferase, catabolic OS=Streptococcus pyogenes
serotype M1 GN=arcB PE=3 SV=2
Length = 337
Score = 32.0 bits (71), Expect = 1.3, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 5/45 (11%)
Query: 60 GLSSARIDLTPSVGSDPELIRYANDLGFMKKESLPECAKVLEEMF 104
++A IDL G+ PE + AND+ KKES + AKVL MF
Sbjct: 63 AFTTAAIDL----GAHPEYLG-ANDIQLGKKESTEDTAKVLGRMF 102
>sp|Q8GND4|OTCC_STRGC Ornithine carbamoyltransferase, catabolic OS=Streptococcus gordonii
(strain Challis / ATCC 35105 / CH1 / DL1 / V288) GN=arcB
PE=3 SV=1
Length = 338
Score = 32.0 bits (71), Expect = 1.3, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 5/45 (11%)
Query: 60 GLSSARIDLTPSVGSDPELIRYANDLGFMKKESLPECAKVLEEMF 104
++A IDL G+ PE + AND+ KKES + AKVL MF
Sbjct: 64 AFTTAAIDL----GAHPEYLG-ANDIQLGKKESTEDTAKVLGRMF 103
>sp|B5XMC1|OTC_STRPZ Ornithine carbamoyltransferase OS=Streptococcus pyogenes serotype
M49 (strain NZ131) GN=arcB PE=3 SV=1
Length = 337
Score = 32.0 bits (71), Expect = 1.3, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 5/45 (11%)
Query: 60 GLSSARIDLTPSVGSDPELIRYANDLGFMKKESLPECAKVLEEMF 104
++A IDL G+ PE + AND+ KKES + AKVL MF
Sbjct: 63 AFTTAAIDL----GAHPEYLG-ANDIQLGKKESTEDTAKVLGRMF 102
>sp|A2RDJ1|OTC_STRPG Ornithine carbamoyltransferase OS=Streptococcus pyogenes serotype
M5 (strain Manfredo) GN=arcB PE=3 SV=1
Length = 337
Score = 32.0 bits (71), Expect = 1.3, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 5/45 (11%)
Query: 60 GLSSARIDLTPSVGSDPELIRYANDLGFMKKESLPECAKVLEEMF 104
++A IDL G+ PE + AND+ KKES + AKVL MF
Sbjct: 63 AFTTAAIDL----GAHPEYLG-ANDIQLGKKESTEDTAKVLGRMF 102
>sp|Q1J5Q6|OTC_STRPF Ornithine carbamoyltransferase OS=Streptococcus pyogenes serotype
M4 (strain MGAS10750) GN=arcB PE=3 SV=1
Length = 337
Score = 32.0 bits (71), Expect = 1.3, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 5/45 (11%)
Query: 60 GLSSARIDLTPSVGSDPELIRYANDLGFMKKESLPECAKVLEEMF 104
++A IDL G+ PE + AND+ KKES + AKVL MF
Sbjct: 63 AFTTAAIDL----GAHPEYLG-ANDIQLGKKESTEDTAKVLGRMF 102
>sp|Q1JFZ1|OTC_STRPD Ornithine carbamoyltransferase OS=Streptococcus pyogenes serotype
M2 (strain MGAS10270) GN=arcB PE=3 SV=1
Length = 337
Score = 32.0 bits (71), Expect = 1.3, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 5/45 (11%)
Query: 60 GLSSARIDLTPSVGSDPELIRYANDLGFMKKESLPECAKVLEEMF 104
++A IDL G+ PE + AND+ KKES + AKVL MF
Sbjct: 63 AFTTAAIDL----GAHPEYLG-ANDIQLGKKESTEDTAKVLGRMF 102
>sp|Q1JKW5|OTC_STRPC Ornithine carbamoyltransferase OS=Streptococcus pyogenes serotype
M12 (strain MGAS9429) GN=arcB PE=3 SV=1
Length = 337
Score = 32.0 bits (71), Expect = 1.3, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 5/45 (11%)
Query: 60 GLSSARIDLTPSVGSDPELIRYANDLGFMKKESLPECAKVLEEMF 104
++A IDL G+ PE + AND+ KKES + AKVL MF
Sbjct: 63 AFTTAAIDL----GAHPEYLG-ANDIQLGKKESTEDTAKVLGRMF 102
>sp|Q1JAR4|OTC_STRPB Ornithine carbamoyltransferase OS=Streptococcus pyogenes serotype
M12 (strain MGAS2096) GN=arcB PE=3 SV=1
Length = 337
Score = 32.0 bits (71), Expect = 1.3, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 5/45 (11%)
Query: 60 GLSSARIDLTPSVGSDPELIRYANDLGFMKKESLPECAKVLEEMF 104
++A IDL G+ PE + AND+ KKES + AKVL MF
Sbjct: 63 AFTTAAIDL----GAHPEYLG-ANDIQLGKKESTEDTAKVLGRMF 102
>sp|P0DC83|OTCC_STRPQ Ornithine carbamoyltransferase, catabolic OS=Streptococcus pyogenes
serotype M3 (strain SSI-1) GN=arcB PE=3 SV=1
Length = 337
Score = 32.0 bits (71), Expect = 1.3, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 5/45 (11%)
Query: 60 GLSSARIDLTPSVGSDPELIRYANDLGFMKKESLPECAKVLEEMF 104
++A IDL G+ PE + AND+ KKES + AKVL MF
Sbjct: 63 AFTTAAIDL----GAHPEYLG-ANDIQLGKKESTEDTAKVLGRMF 102
>sp|P65610|OTCC_STRP8 Ornithine carbamoyltransferase, catabolic OS=Streptococcus pyogenes
serotype M18 (strain MGAS8232) GN=arcB PE=3 SV=2
Length = 337
Score = 32.0 bits (71), Expect = 1.3, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 5/45 (11%)
Query: 60 GLSSARIDLTPSVGSDPELIRYANDLGFMKKESLPECAKVLEEMF 104
++A IDL G+ PE + AND+ KKES + AKVL MF
Sbjct: 63 AFTTAAIDL----GAHPEYLG-ANDIQLGKKESTEDTAKVLGRMF 102
>sp|Q5XAY4|OTCC_STRP6 Ornithine carbamoyltransferase, catabolic OS=Streptococcus pyogenes
serotype M6 (strain ATCC BAA-946 / MGAS10394) GN=arcB
PE=1 SV=3
Length = 337
Score = 32.0 bits (71), Expect = 1.3, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 5/45 (11%)
Query: 60 GLSSARIDLTPSVGSDPELIRYANDLGFMKKESLPECAKVLEEMF 104
++A IDL G+ PE + AND+ KKES + AKVL MF
Sbjct: 63 AFTTAAIDL----GAHPEYLG-ANDIQLGKKESTEDTAKVLGRMF 102
>sp|P0DC82|OTCC_STRP3 Ornithine carbamoyltransferase, catabolic OS=Streptococcus pyogenes
serotype M3 (strain ATCC BAA-595 / MGAS315) GN=arcB PE=3
SV=1
Length = 337
Score = 32.0 bits (71), Expect = 1.3, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 5/45 (11%)
Query: 60 GLSSARIDLTPSVGSDPELIRYANDLGFMKKESLPECAKVLEEMF 104
++A IDL G+ PE + AND+ KKES + AKVL MF
Sbjct: 63 AFTTAAIDL----GAHPEYLG-ANDIQLGKKESTEDTAKVLGRMF 102
>sp|Q6TK73|OTCC_STRRT Ornithine carbamoyltransferase, catabolic OS=Streptococcus ratti
GN=arcB PE=3 SV=1
Length = 337
Score = 31.6 bits (70), Expect = 1.4, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 5/45 (11%)
Query: 60 GLSSARIDLTPSVGSDPELIRYANDLGFMKKESLPECAKVLEEMF 104
++A IDL G+ PE + AND+ KKES + AKVL MF
Sbjct: 63 AFTTAAIDL----GAHPEYLG-ANDIQLGKKESTEDTAKVLGRMF 102
>sp|Q8VW55|OTCC_OENOE Ornithine carbamoyltransferase, catabolic OS=Oenococcus oeni
GN=arcB PE=3 SV=1
Length = 351
Score = 31.6 bits (70), Expect = 1.7, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 5/45 (11%)
Query: 60 GLSSARIDLTPSVGSDPELIRYANDLGFMKKESLPECAKVLEEMF 104
++A IDL G+ PE + +ND+ KKES+ + A+VL MF
Sbjct: 76 AFTTASIDL----GAHPEFLG-SNDIQLGKKESVEDTARVLGSMF 115
>sp|O53089|OTCC_LACSK Ornithine carbamoyltransferase, catabolic OS=Lactobacillus sakei
GN=arcB PE=3 SV=1
Length = 337
Score = 31.2 bits (69), Expect = 1.9, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 5/45 (11%)
Query: 60 GLSSARIDLTPSVGSDPELIRYANDLGFMKKESLPECAKVLEEMF 104
++A IDL G+ PE + ND+ KKES+ + AKVL MF
Sbjct: 64 AFTTAAIDL----GAHPEFLG-KNDIQLGKKESVEDTAKVLGSMF 103
>sp|Q9CHD1|OTC_LACLA Ornithine carbamoyltransferase OS=Lactococcus lactis subsp. lactis
(strain IL1403) GN=argF PE=3 SV=1
Length = 333
Score = 31.2 bits (69), Expect = 2.0, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 5/45 (11%)
Query: 60 GLSSARIDLTPSVGSDPELIRYANDLGFMKKESLPECAKVLEEMF 104
++A +DL G+ PE + ND+ KKES+ + AKVL MF
Sbjct: 60 AFTTAAVDL----GAHPEFLG-PNDIQLGKKESISDTAKVLGSMF 99
>sp|A4VU03|OTC_STRSY Ornithine carbamoyltransferase OS=Streptococcus suis (strain
05ZYH33) GN=arcB PE=3 SV=1
Length = 337
Score = 30.8 bits (68), Expect = 2.5, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 25/45 (55%), Gaps = 5/45 (11%)
Query: 60 GLSSARIDLTPSVGSDPELIRYANDLGFMKKESLPECAKVLEEMF 104
+ A IDL G+ PE + AND+ KKES + AKVL MF
Sbjct: 63 AFTVASIDL----GAHPEYLG-ANDIQLGKKESTEDTAKVLGRMF 102
>sp|A4W094|OTC_STRS2 Ornithine carbamoyltransferase OS=Streptococcus suis (strain
98HAH33) GN=arcB PE=3 SV=1
Length = 337
Score = 30.8 bits (68), Expect = 2.5, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 25/45 (55%), Gaps = 5/45 (11%)
Query: 60 GLSSARIDLTPSVGSDPELIRYANDLGFMKKESLPECAKVLEEMF 104
+ A IDL G+ PE + AND+ KKES + AKVL MF
Sbjct: 63 AFTVASIDL----GAHPEYLG-ANDIQLGKKESTEDTAKVLGRMF 102
>sp|Q8GG79|OTCC_STRSU Ornithine carbamoyltransferase, catabolic OS=Streptococcus suis
GN=arcB PE=3 SV=2
Length = 337
Score = 30.8 bits (68), Expect = 2.5, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 25/45 (55%), Gaps = 5/45 (11%)
Query: 60 GLSSARIDLTPSVGSDPELIRYANDLGFMKKESLPECAKVLEEMF 104
+ A IDL G+ PE + AND+ KKES + AKVL MF
Sbjct: 63 AFTVASIDL----GAHPEYLG-ANDIQLGKKESTEDTAKVLGRMF 102
>sp|B2JGA0|TOLB_BURP8 Protein TolB OS=Burkholderia phymatum (strain DSM 17167 / STM815)
GN=tolB PE=3 SV=1
Length = 430
Score = 30.0 bits (66), Expect = 5.0, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 30/74 (40%), Gaps = 6/74 (8%)
Query: 19 REVVSDQSGTYKIPIEGCHAKLCQVRLVKSPKPECSEIVADGLSSAR------IDLTPSV 72
R VVSDQ G P + V L ++ + + ADG R ID PS
Sbjct: 232 RVVVSDQKGNNSAPAWSPDGRTLAVALSRTGNTQIFAVNADGSGLRRLTQGSSIDTEPSY 291
Query: 73 GSDPELIRYANDLG 86
D + I + +D G
Sbjct: 292 SPDGQSIYFTSDRG 305
>sp|A2BLC6|G3P_HYPBU Glyceraldehyde-3-phosphate dehydrogenase OS=Hyperthermus butylicus
(strain DSM 5456 / JCM 9403) GN=gap PE=3 SV=1
Length = 343
Score = 29.6 bits (65), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 6/80 (7%)
Query: 31 IPIEGCHAKLCQVRLVKSPKPECSEIVADGLSSARI---DLTPSVGSDPELIRYANDLGF 87
+P H + L K E ++VA S+ RI D + + S EL+ YA DLG
Sbjct: 215 VPTTLMHVHIVYAELEKPVTRE--DVVATFESTPRILLADASYGLASTAELVEYARDLG- 271
Query: 88 MKKESLPECAKVLEEMFIHG 107
K+ +PE L+ + ++G
Sbjct: 272 RKRYDIPELIVWLDSIAVNG 291
>sp|A6UN87|COFG_METVS FO synthase subunit 1 OS=Methanococcus vannielii (strain SB / ATCC
35089 / DSM 1224) GN=cofG PE=3 SV=1
Length = 351
Score = 29.3 bits (64), Expect = 7.7, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 77 ELIRYANDLGFMKKESLPECAKVLEEMFI 105
EL R++N+LGF KE LP K + E +I
Sbjct: 314 ELERFSNELGFKLKERLPIYEKYINENWI 342
>sp|Q16UN6|NCBP1_AEDAE Nuclear cap-binding protein subunit 1 OS=Aedes aegypti GN=Cbp80
PE=3 SV=1
Length = 813
Score = 29.3 bits (64), Expect = 8.2, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 30 KIPIEGCHAKLCQVRLVKSPKPECSEIVADGLSSARIDLTPSVGSDPELIRYANDLGFMK 89
KIP+E C ++ L K P P +I + L PS P+++ A ++ FM+
Sbjct: 347 KIPLEYCIVEVIFAELFKMPTPRYLDICYGSILIELCKLQPS--KMPQVLAQATEILFMR 404
Query: 90 KESL 93
+S+
Sbjct: 405 IDSM 408
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.133 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,051,616
Number of Sequences: 539616
Number of extensions: 1539347
Number of successful extensions: 2482
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 47
Number of HSP's that attempted gapping in prelim test: 2449
Number of HSP's gapped (non-prelim): 63
length of query: 107
length of database: 191,569,459
effective HSP length: 75
effective length of query: 32
effective length of database: 151,098,259
effective search space: 4835144288
effective search space used: 4835144288
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)