BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045134
(529 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q499P8|CP058_RAT UPF0420 protein C16orf58 homolog OS=Rattus norvegicus PE=2 SV=1
Length = 466
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 87/245 (35%), Positives = 134/245 (54%), Gaps = 2/245 (0%)
Query: 124 MLPEGFPDSVTSDYLNYSLWRSVQGVASQISGVLATQALLYAIGLGKG-AIPTAAAINWV 182
+LP+GFPDSV+ DYL Y LW SVQ AS +SG LATQA+L +G+G A +AA W+
Sbjct: 75 LLPQGFPDSVSPDYLQYQLWDSVQAFASSLSGSLATQAVLQGLGVGNAKASVSAATSTWL 134
Query: 183 LKDGIGYLSKIMLSNF-GRHFDVNPKGWRLFADLLENAAFGLEMLTPAFPHHFVFIGAAA 241
+KD G L +I+ + + G D N K WRLFAD+L + A LE++ P +P F + +
Sbjct: 135 VKDSTGMLGRIIFAWWKGSKLDCNAKQWRLFADILNDTAMFLEIMAPMYPIFFTMTVSTS 194
Query: 242 GAGRSAAALIQASTRSCFYAGFAARRNFAEVIAKGEAQGMVSKAIGIMLGIALANHIGSS 301
+ + +TR+ A R N A+V AK +Q V G+++ + + +
Sbjct: 195 NLAKCIVGVAGGATRAALTMHQARRNNMADVSAKDSSQETVVNLAGLLVSLLMLPLVSDC 254
Query: 302 MPFALASFSVVTWIHMYCNLKSYQSIELRTLNPYRASLVFSEYLLSGQAPPVKEVNDEEP 361
+ +L F ++T +H+Y N ++ +++ L TLN R LV +L G+ N EP
Sbjct: 255 LSLSLGCFILLTALHIYANYRAVRALVLETLNESRLQLVLKHFLQRGEVLEPASANQMEP 314
Query: 362 LFPAF 366
L+ F
Sbjct: 315 LWTGF 319
>sp|Q96GQ5|CP058_HUMAN UPF0420 protein C16orf58 OS=Homo sapiens GN=C16orf58 PE=1 SV=2
Length = 468
Score = 157 bits (396), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 104/325 (32%), Positives = 158/325 (48%), Gaps = 18/325 (5%)
Query: 46 FCHLQVATAIARTATSSEDDGNKEYDAVWEVKGSKRTKLIPDFTKDAFVVAS--ASNASL 103
C Q + AR ++ D + W G R + +DA V + A + L
Sbjct: 11 LCSEQFGSGEARGCRAAADGSLQWEVGGWRWWGLSRAFTVKPEGRDAGEVGASGAPSPPL 70
Query: 104 SSLLSVNKLWDECRELFVQFMLPEGFPDSVTSDYLNYSLWRSVQGVASQISGVLATQALL 163
S L +V LP+GFPDSV+ DYL Y LW SVQ AS +SG LATQA+L
Sbjct: 71 SGLQAV--------------FLPQGFPDSVSPDYLPYQLWDSVQAFASSLSGSLATQAVL 116
Query: 164 YAIGLGKG-AIPTAAAINWVLKDGIGYLSKIMLSNF-GRHFDVNPKGWRLFADLLENAAF 221
IG+G A +AA W++KD G L +I+ + + G D N K WRLFAD+L + A
Sbjct: 117 LGIGVGNAKATVSAATATWLVKDSTGMLGRIVFAWWKGSKLDCNAKQWRLFADILNDVAM 176
Query: 222 GLEMLTPAFPHHFVFIGAAAGAGRSAAALIQASTRSCFYAGFAARRNFAEVIAKGEAQGM 281
LE++ P +P F + + + ++ +TR+ A R N A+V AK +Q
Sbjct: 177 FLEIMAPVYPICFTMTVSTSNLAKCIVSVAGGATRAALTVHQARRNNMADVSAKDSSQET 236
Query: 282 VSKAIGIMLGIALANHIGSSMPFALASFSVVTWIHMYCNLKSYQSIELRTLNPYRASLVF 341
+ G+++ + + + F+L F +T +H+Y N ++ +++ + TLN R LV
Sbjct: 237 LVNLAGLLVSLLMLPLVSGCPGFSLGCFFFLTALHIYANYRAVRALVMETLNEGRLRLVL 296
Query: 342 SEYLLSGQAPPVKEVNDEEPLFPAF 366
YL G+ N EPL+ F
Sbjct: 297 KHYLQRGEVLDPTAANRMEPLWTGF 321
>sp|Q91W34|CP058_MOUSE UPF0420 protein C16orf58 homolog OS=Mus musculus PE=2 SV=1
Length = 466
Score = 157 bits (396), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 88/245 (35%), Positives = 134/245 (54%), Gaps = 2/245 (0%)
Query: 124 MLPEGFPDSVTSDYLNYSLWRSVQGVASQISGVLATQALLYAIGLGKG-AIPTAAAINWV 182
+LP+GFPDSV+ DYL Y LW SVQ AS +SG LATQA+L +G+G A +AA W+
Sbjct: 75 LLPQGFPDSVSPDYLPYQLWDSVQAFASSLSGSLATQAVLQGLGVGNAKASVSAATSTWL 134
Query: 183 LKDGIGYLSKIMLSNF-GRHFDVNPKGWRLFADLLENAAFGLEMLTPAFPHHFVFIGAAA 241
+KD G L +I+L+ + G D N K WRLFAD+L + A LE++ P +P F + +
Sbjct: 135 VKDSTGMLGRIILAWWKGSKLDCNAKQWRLFADILNDVAMFLEIMAPMYPIFFTMTVSTS 194
Query: 242 GAGRSAAALIQASTRSCFYAGFAARRNFAEVIAKGEAQGMVSKAIGIMLGIALANHIGSS 301
+ + +TR+ A R N A+V AK +Q V G+++ + + +
Sbjct: 195 NLAKCIVGVAGGATRAALTMHQARRNNMADVSAKDSSQETVVNLAGLLVSLLMLPLVSDC 254
Query: 302 MPFALASFSVVTWIHMYCNLKSYQSIELRTLNPYRASLVFSEYLLSGQAPPVKEVNDEEP 361
+L F ++T +H+Y N ++ +++ L TLN R LV +L G+ N EP
Sbjct: 255 PSLSLGCFVLLTALHIYANYRAVRALVLETLNESRLQLVLEHFLQRGEVLEPASANQMEP 314
Query: 362 LFPAF 366
L+ F
Sbjct: 315 LWTGF 319
>sp|Q5R8F6|CP058_PONAB UPF0420 protein C16orf58 homolog OS=Pongo abelii PE=2 SV=1
Length = 468
Score = 156 bits (394), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 88/244 (36%), Positives = 134/244 (54%), Gaps = 2/244 (0%)
Query: 125 LPEGFPDSVTSDYLNYSLWRSVQGVASQISGVLATQALLYAIGLGKG-AIPTAAAINWVL 183
LP+GFPDSV+ DYL Y LW SVQ AS +SG LATQA+L IG+G A +AA W++
Sbjct: 78 LPQGFPDSVSPDYLPYQLWDSVQAFASGLSGSLATQAVLLGIGVGNAKATVSAATATWLV 137
Query: 184 KDGIGYLSKIMLSNF-GRHFDVNPKGWRLFADLLENAAFGLEMLTPAFPHHFVFIGAAAG 242
KD G L +I+ + + G D N K WRLFAD+L + A LE++ P +P F + +
Sbjct: 138 KDSTGMLGRIVFAWWKGSKLDCNAKQWRLFADILNDVAMFLEIMAPVYPICFTMTVSTSN 197
Query: 243 AGRSAAALIQASTRSCFYAGFAARRNFAEVIAKGEAQGMVSKAIGIMLGIALANHIGSSM 302
+ ++ +TR+ A R N A+V AK +Q + +G+++ + + +
Sbjct: 198 LAKCIVSVAGGATRAALTVHQARRNNMADVSAKDSSQETLVNLVGLLVSLLMLPLVSGCP 257
Query: 303 PFALASFSVVTWIHMYCNLKSYQSIELRTLNPYRASLVFSEYLLSGQAPPVKEVNDEEPL 362
F+L F +T +H+Y N ++ +++ + TLN R LV YL G+ N EPL
Sbjct: 258 GFSLGCFFFLTALHIYANYRAVRALVMETLNEGRLRLVLKHYLQRGEVLNPTAANRMEPL 317
Query: 363 FPAF 366
+ F
Sbjct: 318 WTGF 321
>sp|Q86K80|U420_DICDI UPF0420 protein OS=Dictyostelium discoideum GN=DDB_G0277179 PE=3
SV=1
Length = 527
Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 138/260 (53%), Gaps = 6/260 (2%)
Query: 119 LFVQFMLPEGFPDSVTSDYLNYSLWRSVQGVASQISGVLATQALLYAIGLGKGAIPTAAA 178
+ + LP G+PDSVT+DY Y W S+Q + S I+G LAT+A+L G+G + A+A
Sbjct: 58 VLCELFLPNGYPDSVTTDYFGYQFWDSIQALCSTITGTLATRAILKGYGVGDSSATVASA 117
Query: 179 -INWVLKDGIGYLSKIMLS-NFGRHFDVNPKGWRLFADLLENAAFGLEMLTPAFPHH-FV 235
W+++DG+G + +I+ + G D N K WR AD+L N EM++P F F+
Sbjct: 118 TTQWLIRDGMGMIGRIVFAWRKGTDLDCNSKKWRYTADILNNIGMAFEMISPLFSSQLFL 177
Query: 236 FIGAAAGAGRSAAALIQASTRSCFYAGFAARRNFAEVIAKGEAQGMVSKAIGIMLGIALA 295
+ +S + T++ FA R N A+V AK +Q +G++L + ++
Sbjct: 178 PLSCIGLIAKSICGVAGGCTKASLTQHFAKRDNLADVSAKDGSQETAVNLVGMLLSVIVS 237
Query: 296 NHI--GSSMPFALASFSVVTWIHMYCNLKSYQSIELRTLNPYRASLVFSEYLLS-GQAPP 352
+ I +S+ F T +H++CN ++ +++L+++N YRA L++ ++ + G P
Sbjct: 238 SFINDNTSLIVTWLVFLFFTSLHLFCNYRAVSAVQLKSINRYRAYLIYDYFIHNQGSIPS 297
Query: 353 VKEVNDEEPLFPAFHFFKIK 372
E++ E + + I+
Sbjct: 298 PSEISKLENILFSIKELDIR 317
>sp|C0QFH9|PANB_DESAH 3-methyl-2-oxobutanoate hydroxymethyltransferase
OS=Desulfobacterium autotrophicum (strain ATCC 43914 /
DSM 3382 / HRM2) GN=panB PE=3 SV=1
Length = 263
Score = 37.0 bits (84), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 37/79 (46%), Gaps = 13/79 (16%)
Query: 146 VQGVASQISGVLATQALLYAIGLGKGAIPTAAAINWVLKDGIGYLSKIMLSNFGRHFDVN 205
++G+ S I+G++ + + IG+G G P VL D ML RH
Sbjct: 179 LEGIPSDIAGIITKKLDIPTIGIGAG--PGCDGQILVLHD--------MLGLHDRHL--- 225
Query: 206 PKGWRLFADLLENAAFGLE 224
PK R FADL AA GLE
Sbjct: 226 PKFVRQFADLRTQAARGLE 244
>sp|B4E800|METK_BURCJ S-adenosylmethionine synthase OS=Burkholderia cepacia (strain J2315
/ LMG 16656) GN=metK PE=3 SV=1
Length = 395
Score = 35.4 bits (80), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 15/75 (20%)
Query: 157 LATQALL---YAIGLGKGAIPTAAAINWVLKDGIGYLSKIMLSNFGR-HFDVNPKGWRLF 212
LA++AL+ YAIG+ + PT+ +N G G +S +++ R HFD+ PKG
Sbjct: 294 LASRALIQVSYAIGVAE---PTSVMVNTF---GTGRVSDAVITKLVREHFDLRPKGIIKM 347
Query: 213 ADLL-----ENAAFG 222
DLL + AA+G
Sbjct: 348 LDLLRPIYEKTAAYG 362
>sp|A0KBF2|METK_BURCH S-adenosylmethionine synthase OS=Burkholderia cenocepacia (strain
HI2424) GN=metK PE=3 SV=1
Length = 395
Score = 35.4 bits (80), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 15/75 (20%)
Query: 157 LATQALL---YAIGLGKGAIPTAAAINWVLKDGIGYLSKIMLSNFGR-HFDVNPKGWRLF 212
LA++AL+ YAIG+ + PT+ +N G G +S +++ R HFD+ PKG
Sbjct: 294 LASRALIQVSYAIGVAE---PTSVMVNTF---GTGRVSDAVITKLVREHFDLRPKGIIKM 347
Query: 213 ADLL-----ENAAFG 222
DLL + AA+G
Sbjct: 348 LDLLRPIYEKTAAYG 362
>sp|B1K0F2|METK_BURCC S-adenosylmethionine synthase OS=Burkholderia cenocepacia (strain
MC0-3) GN=metK PE=3 SV=1
Length = 395
Score = 35.4 bits (80), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 15/75 (20%)
Query: 157 LATQALL---YAIGLGKGAIPTAAAINWVLKDGIGYLSKIMLSNFGR-HFDVNPKGWRLF 212
LA++AL+ YAIG+ + PT+ +N G G +S +++ R HFD+ PKG
Sbjct: 294 LASRALIQVSYAIGVAE---PTSVMVNTF---GTGRVSDAVITKLVREHFDLRPKGIIKM 347
Query: 213 ADLL-----ENAAFG 222
DLL + AA+G
Sbjct: 348 LDLLRPIYEKTAAYG 362
>sp|Q1BSN9|METK_BURCA S-adenosylmethionine synthase OS=Burkholderia cenocepacia (strain
AU 1054) GN=metK PE=3 SV=1
Length = 395
Score = 35.4 bits (80), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 15/75 (20%)
Query: 157 LATQALL---YAIGLGKGAIPTAAAINWVLKDGIGYLSKIMLSNFGR-HFDVNPKGWRLF 212
LA++AL+ YAIG+ + PT+ +N G G +S +++ R HFD+ PKG
Sbjct: 294 LASRALIQVSYAIGVAE---PTSVMVNTF---GTGRVSDAVITKLVREHFDLRPKGIIKM 347
Query: 213 ADLL-----ENAAFG 222
DLL + AA+G
Sbjct: 348 LDLLRPIYEKTAAYG 362
>sp|Q39BZ1|METK_BURS3 S-adenosylmethionine synthase OS=Burkholderia sp. (strain 383)
GN=metK PE=3 SV=1
Length = 395
Score = 35.4 bits (80), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 15/75 (20%)
Query: 157 LATQALL---YAIGLGKGAIPTAAAINWVLKDGIGYLSKIMLSNFGR-HFDVNPKGWRLF 212
LA++AL+ YAIG+ + PT+ +N G G +S +++ R HFD+ PKG
Sbjct: 294 LASRALIQVSYAIGVAE---PTSVMVNTF---GTGRVSDAVITKLVREHFDLRPKGIIKM 347
Query: 213 ADLL-----ENAAFG 222
DLL + AA+G
Sbjct: 348 LDLLRPIYEKTAAYG 362
>sp|Q0BAY8|METK_BURCM S-adenosylmethionine synthase OS=Burkholderia ambifaria (strain
ATCC BAA-244 / AMMD) GN=metK PE=3 SV=1
Length = 395
Score = 35.4 bits (80), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 15/75 (20%)
Query: 157 LATQALL---YAIGLGKGAIPTAAAINWVLKDGIGYLSKIMLSNFGR-HFDVNPKGWRLF 212
LA++AL+ YAIG+ + PT+ +N G G +S +++ R HFD+ PKG
Sbjct: 294 LASRALIQVSYAIGVAE---PTSVMVNTF---GTGRVSDAVITKLVREHFDLRPKGIIKM 347
Query: 213 ADLL-----ENAAFG 222
DLL + AA+G
Sbjct: 348 LDLLRPIYEKTAAYG 362
>sp|B1YPQ4|METK_BURA4 S-adenosylmethionine synthase OS=Burkholderia ambifaria (strain
MC40-6) GN=metK PE=3 SV=1
Length = 395
Score = 35.4 bits (80), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 15/75 (20%)
Query: 157 LATQALL---YAIGLGKGAIPTAAAINWVLKDGIGYLSKIMLSNFGR-HFDVNPKGWRLF 212
LA++AL+ YAIG+ + PT+ +N G G +S +++ R HFD+ PKG
Sbjct: 294 LASRALIQVSYAIGVAE---PTSVMVNTF---GTGRVSDAVITKLVREHFDLRPKGIIKM 347
Query: 213 ADLL-----ENAAFG 222
DLL + AA+G
Sbjct: 348 LDLLRPIYEKTAAYG 362
>sp|A4JIQ4|METK_BURVG S-adenosylmethionine synthase OS=Burkholderia vietnamiensis (strain
G4 / LMG 22486) GN=metK PE=3 SV=1
Length = 395
Score = 35.0 bits (79), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 15/75 (20%)
Query: 157 LATQALL---YAIGLGKGAIPTAAAINWVLKDGIGYLSKIMLSNFGR-HFDVNPKGWRLF 212
LA++AL+ YAIG+ + PT+ +N G G +S +++ R HFD+ PKG
Sbjct: 294 LASRALIQVSYAIGVAE---PTSVMVNTF---GTGRVSDAVITKLVREHFDLRPKGIIKM 347
Query: 213 ADLL-----ENAAFG 222
DLL + AA+G
Sbjct: 348 LDLLRPIYEKTAAYG 362
>sp|P95907|GLPK2_SULSO Glycerol kinase 2 OS=Sulfolobus solfataricus (strain ATCC 35092 /
DSM 1617 / JCM 11322 / P2) GN=glpK2 PE=3 SV=1
Length = 499
Score = 34.3 bits (77), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 77/189 (40%), Gaps = 33/189 (17%)
Query: 75 EVK-GSKRTKLIPDFTKDAFVVASASNASLSSLLSVNKL-WDECRELFVQFMLPEGFPDS 132
E+K G+ T LI T V SNAS + L ++NKL WD RE+ +PE
Sbjct: 158 EIKFGTIDTYLIWKLTNGKIHVTDYSNASRTMLFNINKLEWD--REILELLKIPESILPE 215
Query: 133 V--TSDYLNYSLWRSVQGVASQISGVLATQ--ALLYAIGLGKGAIPTAAAINWVLKDGIG 188
V +SD Y+ V G + ISG Q AL + G + + G G
Sbjct: 216 VRPSSDIYGYT---EVLGSSIPISGDAGDQQAALFGQVAYDMGEVKSTY--------GTG 264
Query: 189 YLSKIMLSNFGRHFDVNPKGWRLFAD-LLENAAFGLE--MLTPAFPHHFVFIGAAAGAGR 245
+L N G NP +F++ LL A+GLE +T A GAA R
Sbjct: 265 ---SFILMNIGS----NP----IFSENLLTTIAWGLESKRVTYALEGSIFITGAAVQWFR 313
Query: 246 SAAALIQAS 254
I AS
Sbjct: 314 DGLRAIDAS 322
>sp|B7ITF9|NAMA_BACC2 NADPH dehydrogenase OS=Bacillus cereus (strain G9842) GN=namA PE=3
SV=1
Length = 345
Score = 33.9 bits (76), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 108 SVNKLWDECRELFVQFMLPEGFPDSVT-SDYLNYSLWRSVQGV 149
SVNK+WD +FV+ + PD +T DY+ Y+ W QG+
Sbjct: 203 SVNKVWDG--PIFVRISANDYHPDGLTVQDYVQYTKWMKEQGI 243
>sp|Q81EF6|NAMA_BACCR NADPH dehydrogenase OS=Bacillus cereus (strain ATCC 14579 / DSM 31)
GN=namA PE=3 SV=2
Length = 345
Score = 32.3 bits (72), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 108 SVNKLWDECRELFVQFMLPEGFPDSVT-SDYLNYSLWRSVQGV 149
SVN++WD +FV+ + PD +T DY+ Y+ W QG+
Sbjct: 203 SVNEVWDG--PIFVRISANDYHPDGLTVQDYVQYTKWMKEQGI 243
>sp|B7HJE9|NAMA_BACC4 NADPH dehydrogenase OS=Bacillus cereus (strain B4264) GN=namA PE=3
SV=1
Length = 345
Score = 32.3 bits (72), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 108 SVNKLWDECRELFVQFMLPEGFPDSVT-SDYLNYSLWRSVQGV 149
SVN++WD +FV+ + PD +T DY+ Y+ W QG+
Sbjct: 203 SVNEVWDG--PIFVRISANDYHPDGLTVQDYVQYTKWMKEQGI 243
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.133 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 195,965,113
Number of Sequences: 539616
Number of extensions: 8068685
Number of successful extensions: 81694
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 115
Number of HSP's successfully gapped in prelim test: 49
Number of HSP's that attempted gapping in prelim test: 68747
Number of HSP's gapped (non-prelim): 11457
length of query: 529
length of database: 191,569,459
effective HSP length: 122
effective length of query: 407
effective length of database: 125,736,307
effective search space: 51174676949
effective search space used: 51174676949
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)