Query 045136
Match_columns 304
No_of_seqs 144 out of 203
Neff 4.0
Searched_HMMs 29240
Date Mon Mar 25 17:55:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045136.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045136hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1e2t_A NAT, N-hydroxyarylamine 90.7 0.58 2E-05 43.0 7.4 60 124-190 70-131 (284)
2 1w4t_A Arylamine N-acetyltrans 89.4 0.73 2.5E-05 42.8 7.0 60 124-190 91-154 (299)
3 2bsz_A Arylamine N-acetyltrans 89.4 0.77 2.6E-05 42.1 7.0 60 124-190 71-133 (278)
4 2vfb_A Arylamine N-acetyltrans 86.7 1.1 3.8E-05 41.0 6.3 60 124-190 68-133 (280)
5 1w5r_A Arylamine N-acetyltrans 86.7 0.99 3.4E-05 41.3 5.9 60 124-190 71-136 (278)
6 3d9w_A Putative acetyltransfer 84.8 1.5 5.2E-05 40.5 6.2 58 124-188 80-140 (293)
7 3lnb_A N-acetyltransferase fam 84.4 1.4 4.9E-05 41.3 6.0 60 124-190 97-159 (309)
8 2ija_A Arylamine N-acetyltrans 76.8 4.6 0.00016 37.1 6.4 61 124-191 71-134 (295)
9 3kd4_A Putative protease; stru 51.0 37 0.0013 33.2 7.6 102 74-186 230-344 (506)
10 4eg0_A D-alanine--D-alanine li 49.8 20 0.00068 31.8 5.0 95 131-246 34-128 (317)
11 1iow_A DD-ligase, DDLB, D-ALA\ 37.1 34 0.0012 29.4 4.4 95 132-247 24-118 (306)
12 4fu0_A D-alanine--D-alanine li 36.6 39 0.0013 30.8 4.9 48 198-246 113-160 (357)
13 3vot_A L-amino acid ligase, BL 31.3 2.3E+02 0.0079 25.9 9.3 37 132-168 18-54 (425)
No 1
>1e2t_A NAT, N-hydroxyarylamine O-acetyltransferase; acetyl COA dependent; 2.8A {Salmonella typhimurium} SCOP: d.3.1.5
Probab=90.73 E-value=0.58 Score=42.97 Aligned_cols=60 Identities=18% Similarity=0.317 Sum_probs=45.8
Q ss_pred cchhhhHHHHHHHHHHhcCCceeeeecc--CCCCCCCCCcceeEEEEEeCCCCCCCceEEEEecCcccc
Q 045136 124 GACRSCLMREVSGRLGNAGYNSAICKSK--WRSSPDIPSGEHTFMDVRDNSSAKKGEVRVIVELNFRAE 190 (304)
Q Consensus 124 ~~c~~cl~r~v~~~Lr~~GYdAaiCkSk--W~~s~~~p~G~heyIdV~~~~~~~~~~~r~IVD~dFR~q 190 (304)
|-|- =+-..+...|+++||++..+..+ |...+..++..|-.+.|.+. +.+||||+.|=+.
T Consensus 70 GyC~-ElN~Lf~~~L~~LGF~V~~~~~rV~~~~~~~~~~~~H~~l~V~id------g~~ylvDVGFG~~ 131 (284)
T 1e2t_A 70 GYCF-ELNGLFERALRDIGFNVRSLLGRVILSHPASLPPRTHRLLLVDVE------DEQWIADVGFGGQ 131 (284)
T ss_dssp BCHH-HHHHHHHHHHHHTTCCEEEEEEEECTTCCSSCCCSCEEEEEEEET------TEEEEECSCSCTT
T ss_pred EEhH-HHHHHHHHHHHHCCCeEEEEEEEEecCCCCCCCCCccEEEEEEEC------CceEEEecCCCcc
Confidence 5553 23567788999999999987654 65555566788999999983 4699999999763
No 2
>1w4t_A Arylamine N-acetyltransferase; 5- aminosalicylic acid, NAT, xenobiotic metabolism, acyltransferase; 1.95A {Pseudomonas aeruginosa} SCOP: d.3.1.5
Probab=89.44 E-value=0.73 Score=42.78 Aligned_cols=60 Identities=20% Similarity=0.329 Sum_probs=45.9
Q ss_pred cchhhhHHHHHHHHHHhcCCceeeeecc--CCCCCCC--CCcceeEEEEEeCCCCCCCceEEEEecCcccc
Q 045136 124 GACRSCLMREVSGRLGNAGYNSAICKSK--WRSSPDI--PSGEHTFMDVRDNSSAKKGEVRVIVELNFRAE 190 (304)
Q Consensus 124 ~~c~~cl~r~v~~~Lr~~GYdAaiCkSk--W~~s~~~--p~G~heyIdV~~~~~~~~~~~r~IVD~dFR~q 190 (304)
|-|- =+-..+...|+++||++.....+ |...+.. ++..|-.+.|.+. +.+||||+.|=+.
T Consensus 91 GyC~-ElN~Lf~~~L~~LGF~V~~l~arV~~~~~~~~~~~~~~H~~l~V~id------g~~ylvDVGFG~~ 154 (299)
T 1w4t_A 91 GYCF-ELNSLFARLLLALGYELELLVARVRWGLPDDAPLTQQSHLMLRLYLA------EGEFLVDVGFGSA 154 (299)
T ss_dssp BCHH-HHHHHHHHHHHHTTCEEEEEEEEECTTCCTTSCCCCEEEEEEEEEET------TEEEEECSCSGGG
T ss_pred cchH-hHHHHHHHHHHHcCCeEEEEEEEEEeCCCCcCCCCCCccEEEEEEEC------CceEEEeCCCCCc
Confidence 5553 24567788999999999997654 5555555 5788999999983 4699999999764
No 3
>2bsz_A Arylamine N-acetyltransferase 1; acyltransferase, complete proteome; 2.0A {Rhizobium loti} SCOP: d.3.1.5
Probab=89.39 E-value=0.77 Score=42.09 Aligned_cols=60 Identities=18% Similarity=0.269 Sum_probs=45.7
Q ss_pred cchhhhHHHHHHHHHHhcCCceeeeecc--CCCCCCC-CCcceeEEEEEeCCCCCCCceEEEEecCcccc
Q 045136 124 GACRSCLMREVSGRLGNAGYNSAICKSK--WRSSPDI-PSGEHTFMDVRDNSSAKKGEVRVIVELNFRAE 190 (304)
Q Consensus 124 ~~c~~cl~r~v~~~Lr~~GYdAaiCkSk--W~~s~~~-p~G~heyIdV~~~~~~~~~~~r~IVD~dFR~q 190 (304)
|-|- =+-..+...|+++||++..+..+ |...+.. ++..|-.+.|.+. +.+||||+.|=+.
T Consensus 71 GyC~-ElN~Lf~~~L~~LGF~V~~~~arV~~~~~~~~~~~~~H~~l~V~id------g~~ylvDVGFG~~ 133 (278)
T 2bsz_A 71 GYCF-EHNLLFMHALKALGFEVGGLAARVLWGQSEDAITARSHMLLRVELD------GRTYIADVGFGGL 133 (278)
T ss_dssp BCHH-HHHHHHHHHHHHHTCEEEEEEEEECSSCCSSSSCCCCEEEEEEEET------TEEEEECSCCSSS
T ss_pred eehH-HHHHHHHHHHHHCCCeEEEEEEEEeeCCCCCCCCCCccEEEEEEEC------CceEEEeCCCCcc
Confidence 5553 24567788999999999997655 5555555 4678999999983 4699999999764
No 4
>2vfb_A Arylamine N-acetyltransferase; NAT, acetyl COA, mycobacteria, actyltransferase; 2.00A {Mycobacterium marinum} PDB: 2vfc_A* 3ltw_A*
Probab=86.75 E-value=1.1 Score=41.00 Aligned_cols=60 Identities=23% Similarity=0.409 Sum_probs=45.5
Q ss_pred cchhhhHHHHHHHHHHhcCCceeeeecc--CCCCCCC--CCcceeEEEEEeCCCCCCCceE--EEEecCcccc
Q 045136 124 GACRSCLMREVSGRLGNAGYNSAICKSK--WRSSPDI--PSGEHTFMDVRDNSSAKKGEVR--VIVELNFRAE 190 (304)
Q Consensus 124 ~~c~~cl~r~v~~~Lr~~GYdAaiCkSk--W~~s~~~--p~G~heyIdV~~~~~~~~~~~r--~IVD~dFR~q 190 (304)
|-|- =+-..+...|+++||++..+..+ |...+.. ++..|-.+.|.+. +.+ ||||+.|=+.
T Consensus 68 GyC~-ElN~Lf~~~L~~LGF~V~~~~arV~~~~~~~~~~~~~~H~~l~V~id------g~~~~ylvDVGFG~~ 133 (280)
T 2vfb_A 68 GYCY-EHNGLIGYVLAELGYRVRRLAGRVVWLAPPDAPTPAQTHTVLAVTFP------GCQGPYLVDVGFGGM 133 (280)
T ss_dssp BCHH-HHHHHHHHHHHHHTCEEEEEEEEECTTCCTTSCCCCSCEEEEEEECT------TCSSCEEECSCSGGG
T ss_pred eEhH-HHHHHHHHHHHHCCCeEEEEEEEEEeCCCCCCCCCCCCcEEEEEEEC------CeEEEEEEecCCCcc
Confidence 5553 23567788999999999997654 6665665 4788999999883 346 9999999764
No 5
>1w5r_A Arylamine N-acetyltransferase; acyltransferase; 1.45A {Mycobacterium smegmatis} SCOP: d.3.1.5 PDB: 1w6f_A* 1gx3_A
Probab=86.67 E-value=0.99 Score=41.31 Aligned_cols=60 Identities=17% Similarity=0.277 Sum_probs=45.4
Q ss_pred cchhhhHHHHHHHHHHhcCCceeeeecc--CCCCCCC--CCcceeEEEEEeCCCCCCCceE--EEEecCcccc
Q 045136 124 GACRSCLMREVSGRLGNAGYNSAICKSK--WRSSPDI--PSGEHTFMDVRDNSSAKKGEVR--VIVELNFRAE 190 (304)
Q Consensus 124 ~~c~~cl~r~v~~~Lr~~GYdAaiCkSk--W~~s~~~--p~G~heyIdV~~~~~~~~~~~r--~IVD~dFR~q 190 (304)
|-|- =+-..+...|+++||++..+..+ |...+.. ++..|-.+.|.+. +.+ ||||+.|=+.
T Consensus 71 GyC~-ElN~Lf~~~L~~LGF~V~~~~arV~~~~~~~~~~~~~~H~~l~V~id------g~~~~ylvDVGFG~~ 136 (278)
T 1w5r_A 71 GYQY-EHNGLLGYVLEELGFEVERLSGRVVWMRADDAPLPAQTHNVLSVAVP------GADGRYLVDVGFGGQ 136 (278)
T ss_dssp BCHH-HHHHHHHHHHHHHTCEEEEEEEEECTTCCTTCCCCCEEEEEEEEECS------SCSCCEEECSCSCTT
T ss_pred eehH-HHHHHHHHHHHHcCCeEEEEEEEEeeCCCCCCCCCCCccEEEEEEEC------CeEEEEEEecCCCcc
Confidence 5553 24567788999999999997654 6666666 4788999999883 346 9999999764
No 6
>3d9w_A Putative acetyltransferase; arylamine N-acetyltransferase, NAT, X-RAY diffraction, acyltransferase; 2.70A {Nocardia farcinica}
Probab=84.78 E-value=1.5 Score=40.49 Aligned_cols=58 Identities=12% Similarity=0.244 Sum_probs=43.3
Q ss_pred cchhhhHHHHHHHHHHhcCCceeeeecc--CCCCCCCCCcceeEEEE-EeCCCCCCCceEEEEecCcc
Q 045136 124 GACRSCLMREVSGRLGNAGYNSAICKSK--WRSSPDIPSGEHTFMDV-RDNSSAKKGEVRVIVELNFR 188 (304)
Q Consensus 124 ~~c~~cl~r~v~~~Lr~~GYdAaiCkSk--W~~s~~~p~G~heyIdV-~~~~~~~~~~~r~IVD~dFR 188 (304)
|-|- =+-..+...|+++||++..+..+ |.. +..++..|--+.| .+. .+.+||||+.|=
T Consensus 80 GyC~-ElN~Lf~~~L~~LGF~V~~~~arV~~~~-~~~~~~~H~~l~V~~l~-----dg~~ylvDVGFG 140 (293)
T 3d9w_A 80 GYCY-ENAGLFAAALERLGFGVTGHTGRVTMGA-GGLRPATHALLRVTTAD-----DDRVWMCDVGFG 140 (293)
T ss_dssp BCHH-HHHHHHHHHHHHTTCEEEEEEEEECTTC-CSCCCEEEEEEEEECSS-----CSCEEEECCSSS
T ss_pred cChH-HHHHHHHHHHHHcCCeEEEEEEEEecCC-CCCCCCccEEEEEEEcC-----CCCeEEEecCCC
Confidence 5563 24567889999999999987765 433 3456788999999 763 145999999997
No 7
>3lnb_A N-acetyltransferase family protein; arylamine N-acetyltransferase, NAT, acetyltrans acyltransferase; HET: COA; 2.01A {Bacillus anthracis}
Probab=84.44 E-value=1.4 Score=41.28 Aligned_cols=60 Identities=15% Similarity=0.206 Sum_probs=45.2
Q ss_pred cchhhhHHHHHHHHHHhcCCceeeeecc--CCCCCCC-CCcceeEEEEEeCCCCCCCceEEEEecCcccc
Q 045136 124 GACRSCLMREVSGRLGNAGYNSAICKSK--WRSSPDI-PSGEHTFMDVRDNSSAKKGEVRVIVELNFRAE 190 (304)
Q Consensus 124 ~~c~~cl~r~v~~~Lr~~GYdAaiCkSk--W~~s~~~-p~G~heyIdV~~~~~~~~~~~r~IVD~dFR~q 190 (304)
|-|- =+-..+...|+++||++..+..+ |...+.. +.+.|--|.|.+. +.+||||+.|-+.
T Consensus 97 GyC~-ElN~lf~~~L~~lGf~v~~~~arV~~~~~~~~~~~~~H~~l~V~~~------g~~ylvDVGFG~~ 159 (309)
T 3lnb_A 97 GLCY-ELNSLLYYFLMDCGFQVYKVAGTVYDLYDNKWKPDDGHVIIILHHN------KKDYVIDAGFASH 159 (309)
T ss_dssp BCHH-HHHHHHHHHHHHTTCEEEEEEEEEEETTTTEECSTTCEEEEEEEET------TEEEEECSCSTTC
T ss_pred cchH-HHHHHHHHHHHHcCCeEEEEeEEEecCCCCCCCCCCccEEEEEEEC------CeEEEEecCCCCc
Confidence 5553 34567889999999999998766 3333333 5678999999983 4699999999874
No 8
>2ija_A Arylamine N-acetyltransferase 1; arylamide acetylase 1, structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} PDB: 2pqt_A* 2pfr_A*
Probab=76.76 E-value=4.6 Score=37.05 Aligned_cols=61 Identities=13% Similarity=0.156 Sum_probs=44.7
Q ss_pred cchhhhHHHHHHHHHHhcCCceeeeecc--CCCCCCC-CCcceeEEEEEeCCCCCCCceEEEEecCccccc
Q 045136 124 GACRSCLMREVSGRLGNAGYNSAICKSK--WRSSPDI-PSGEHTFMDVRDNSSAKKGEVRVIVELNFRAEF 191 (304)
Q Consensus 124 ~~c~~cl~r~v~~~Lr~~GYdAaiCkSk--W~~s~~~-p~G~heyIdV~~~~~~~~~~~r~IVD~dFR~qF 191 (304)
|-|- =+-..+...|+++||++..+..+ |...+.+ +...|-.+.|.+. +.+||||+.|=+..
T Consensus 71 GyC~-ElN~Lf~~~L~~LGF~V~~~~~rV~~~~~~~~~~~~~H~~l~V~id------g~~ylvDVGFG~~~ 134 (295)
T 2ija_A 71 GWCL-QVNHLLYWALTTIGFETTMLGGYVYSTPAKKYSTGMIHLLLQVTID------GRNYIVDAGSGRSY 134 (295)
T ss_dssp BCHH-HHHHHHHHHHHHHTCEEEEEEEEEEETTTTEECSSCCEEEEEEEET------TEEEEECSCCCGGG
T ss_pred EEhH-HHHHHHHHHHHHcCCcEEEEEEEEeeCCCCCCCCCCCcEEEEEEEC------CceEEEeCCCCCcc
Confidence 5553 23567788999999999997655 3333333 3578999999983 46999999998764
No 9
>3kd4_A Putative protease; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 2.00A {Parabacteroides distasonis atcc 8503}
Probab=50.95 E-value=37 Score=33.15 Aligned_cols=102 Identities=9% Similarity=-0.038 Sum_probs=60.7
Q ss_pred HHHHHHHHhhccChHHHHHHHHHHHHHHHHHHHhhhCCcccccCC-CC-CC-------CcchhhhHHHHHHHHHHhcCCc
Q 045136 74 QHQCLQSTLCRTSSLESKIRNATKEILKEIQLQVAAGNNVCGCGR-RP-VA-------SGACRSCLMREVSGRLGNAGYN 144 (304)
Q Consensus 74 q~~~Lq~~l~~~s~~E~kl~~~v~~al~~~~~~~~~~~~~C~c~r-~~-~a-------~~~c~~cl~r~v~~~Lr~~GYd 144 (304)
..++.+++....+.-+.|+++...-+..+|+= ....=++.. .+ .+ .|+|. -+-..++..||++|..
T Consensus 230 i~~~a~~l~~~~~~~~ek~~~iy~~V~~~i~y----~~~~~~~~g~~~~~a~~vl~~~~G~C~-d~a~Ll~AllRa~GIp 304 (506)
T 3kd4_A 230 SKTFAQFLTDKSGNEQEKVNIIRDHILNNLST----CPIPMAMTGYTVRDIDTVLRSAYGTPL-EIAQLLNVMLNAAGIP 304 (506)
T ss_dssp HHHHHHHHHSSCSSHHHHHHHHHHHHHHHCEE----CCCCGGGGTTCCCCHHHHHHHTEECHH-HHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHhccEe----cceecccCCCCCCCHHHHHHhCCcchH-HHHHHHHHHHHHCCCC
Confidence 44556666666666666765554444444431 111001100 00 00 16675 2356789999999999
Q ss_pred eeeeeccCCCC----CCCCCcceeEEEEEeCCCCCCCceEEEEecC
Q 045136 145 SAICKSKWRSS----PDIPSGEHTFMDVRDNSSAKKGEVRVIVELN 186 (304)
Q Consensus 145 AaiCkSkW~~s----~~~p~G~heyIdV~~~~~~~~~~~r~IVD~d 186 (304)
|..|--.-+.. ..+|+..|-.+.|.+. +..|++|+-
T Consensus 305 A~~v~~~t~~~~~~~~~lp~~nh~i~~v~~~------g~~y~lDat 344 (506)
T 3kd4_A 305 SEVLAVYPGHLDTDACGLAAIQTLAVKATVD------GKDQYLSAS 344 (506)
T ss_dssp EEEEEEEETTSCGGGCCSTTCCEEEEEEEET------TEEEEESSS
T ss_pred cEEEEEEcCCCCCccCCCCCCCEEEEEEEEC------CEEEEEecC
Confidence 99876543322 3678779999888873 568999984
No 10
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=49.84 E-value=20 Score=31.83 Aligned_cols=95 Identities=11% Similarity=-0.044 Sum_probs=54.7
Q ss_pred HHHHHHHHHhcCCceeeeeccCCCCCCCCCcceeEEEEEeCCCCCCCceEEEEecCccccceecCCCHHHHHHHHhCCCc
Q 045136 131 MREVSGRLGNAGYNSAICKSKWRSSPDIPSGEHTFMDVRDNSSAKKGEVRVIVELNFRAEFEMARASEEYNRLVRRLPEL 210 (304)
Q Consensus 131 ~r~v~~~Lr~~GYdAaiCkSkW~~s~~~p~G~heyIdV~~~~~~~~~~~r~IVD~dFR~qFeIArpT~~Y~~ll~~LP~v 210 (304)
-+.|++.|++.||++.+.-++- ..+.....+-+|+++....+ .|- -....+.+++.+--.
T Consensus 34 ~~~v~~al~~~g~~v~~i~~~~---~~~~~l~~~~~D~v~~~~hg--------------~~g---e~~~~~~~le~~gip 93 (317)
T 4eg0_A 34 GRLVLQGLRDAGIDAHPFDPAE---RPLSALKDEGFVRAFNALHG--------------GYG---ENGQIQGALDFYGIR 93 (317)
T ss_dssp HHHHHHHHHHTTCEEEEECTTT---SCTTHHHHTTCCEEEECCCS--------------GGG---TSSHHHHHHHHHTCE
T ss_pred HHHHHHHHHHCCCEEEEEeCCC---chHHHhhhcCCCEEEEcCCC--------------CCC---chHHHHHHHHHcCCC
Confidence 3789999999999998877321 11111111122333321111 110 012357888888888
Q ss_pred eeeChhhHHHHHHHHHHHHHHHHHhcCCCCCCCCCc
Q 045136 211 FVGKVERLSNVIKILCSAAKKCMKEKKMHMGPWRKQ 246 (304)
Q Consensus 211 FVG~~~rL~~iV~~mc~Aak~S~k~~Gm~lPPWRk~ 246 (304)
|+|+......+.. ==..+|+-|++.|++.|||+..
T Consensus 94 ~~g~~~~~~~~~~-dK~~~k~~l~~~Gip~p~~~~~ 128 (317)
T 4eg0_A 94 YTGSGVLGSALGL-DKFRTKLVWQQTGVPTPPFETV 128 (317)
T ss_dssp ESSCCHHHHHHHH-CHHHHHHHHHHTTCCCCCEEEE
T ss_pred eeCcCHHHHHHHh-CHHHHHHHHHHCCcCCCCEEEE
Confidence 9987643332211 0135677899999999999854
No 11
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=37.10 E-value=34 Score=29.40 Aligned_cols=95 Identities=12% Similarity=0.041 Sum_probs=51.4
Q ss_pred HHHHHHHHhcCCceeeeeccCCCCCCCCCcceeEEEEEeCCCCCCCceEEEEecCccccceecCCCHHHHHHHHhCCCce
Q 045136 132 REVSGRLGNAGYNSAICKSKWRSSPDIPSGEHTFMDVRDNSSAKKGEVRVIVELNFRAEFEMARASEEYNRLVRRLPELF 211 (304)
Q Consensus 132 r~v~~~Lr~~GYdAaiCkSkW~~s~~~p~G~heyIdV~~~~~~~~~~~r~IVD~dFR~qFeIArpT~~Y~~ll~~LP~vF 211 (304)
+.|+..|++.||++.++... +. .......+-+|+++....+ .+. | ....+.+++.+--.|
T Consensus 24 ~~l~~al~~~G~~v~~~~~~-~~--~~~~~~~~~~d~v~~~~~~----------~~~---e----~~~~~~~~e~~g~~~ 83 (306)
T 1iow_A 24 AAVLAGLREGGIDAYPVDPK-EV--DVTQLKSMGFQKVFIALHG----------RGG---E----DGTLQGMLELMGLPY 83 (306)
T ss_dssp HHHHHHHHHTTCEEEEECTT-TS--CGGGTTTTTEEEEEECCCS----------TTT---S----SSHHHHHHHHHTCCB
T ss_pred HHHHHHHHHCCCeEEEEecC-ch--HHHHhhccCCCEEEEcCCC----------CCC---c----chHHHHHHHHcCCCc
Confidence 68999999999999887654 11 0111111123444321111 010 0 113356777666567
Q ss_pred eeChhhHHHHHHHHHHHHHHHHHhcCCCCCCCCCch
Q 045136 212 VGKVERLSNVIKILCSAAKKCMKEKKMHMGPWRKQR 247 (304)
Q Consensus 212 VG~~~rL~~iV~~mc~Aak~S~k~~Gm~lPPWRk~~ 247 (304)
+|.......+.. ==..+++-|++.|.++|||+...
T Consensus 84 ~g~~~~~~~~~~-dK~~~~~~l~~~gi~~p~~~~~~ 118 (306)
T 1iow_A 84 TGSGVMASALSM-DKLRSKLLWQGAGLPVAPWVALT 118 (306)
T ss_dssp SSCCHHHHHHHH-CHHHHHHHHHHTTCCBCCEEEEE
T ss_pred cCCCHHHHHHHc-CHHHHHHHHHHCCCCCCCeEEEc
Confidence 776443222211 01246777899999999997643
No 12
>4fu0_A D-alanine--D-alanine ligase 7; vancomycin resistance, peptidoglycan synthesis, D-Ala:D-Ser ATP-grAsp domain; HET: ADP; 2.35A {Enterococcus faecalis}
Probab=36.57 E-value=39 Score=30.80 Aligned_cols=48 Identities=10% Similarity=-0.092 Sum_probs=34.6
Q ss_pred HHHHHHHHhCCCceeeChhhHHHHHHHHHHHHHHHHHhcCCCCCCCCCc
Q 045136 198 EEYNRLVRRLPELFVGKVERLSNVIKILCSAAKKCMKEKKMHMGPWRKQ 246 (304)
Q Consensus 198 ~~Y~~ll~~LP~vFVG~~~rL~~iV~~mc~Aak~S~k~~Gm~lPPWRk~ 246 (304)
...+.+|+.+---|||+.-.-.++- .==..+|+-|++.|.++|||...
T Consensus 113 g~~q~~le~~gip~~G~~~~a~~~~-~DK~~~k~~l~~~Gip~p~~~~~ 160 (357)
T 4fu0_A 113 GTLQGIFELAGIPVVGCDTLSSALC-MDKDRAHKLVSLAGISVPKSVTF 160 (357)
T ss_dssp SHHHHHHHHTTCCBSSCCHHHHHHH-HCHHHHHHHHHHTTCBCCCEEEE
T ss_pred HHHHHHHHHCCCcEECcCHHHHHHH-hCHHHHHHHHHHCCCCCCCEEee
Confidence 3578899999888999865433321 00135788999999999999753
No 13
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=31.31 E-value=2.3e+02 Score=25.89 Aligned_cols=37 Identities=5% Similarity=-0.029 Sum_probs=24.5
Q ss_pred HHHHHHHHhcCCceeeeeccCCCCCCCCCcceeEEEE
Q 045136 132 REVSGRLGNAGYNSAICKSKWRSSPDIPSGEHTFMDV 168 (304)
Q Consensus 132 r~v~~~Lr~~GYdAaiCkSkW~~s~~~p~G~heyIdV 168 (304)
..+.+.++++||.+.+..+..+..........+|+.+
T Consensus 18 ~~i~~aa~~lG~~vv~v~~~~~~~~~~~~~~d~~~~~ 54 (425)
T 3vot_A 18 PFIFEEAERLGLKVTFFYNSAEDFPGNLPAVERCVPL 54 (425)
T ss_dssp CHHHHHHHHTTCEEEEEEETTSCCCCSCTTEEEEEEE
T ss_pred HHHHHHHHHCCCEEEEEECCCcccccCHhhccEEEec
Confidence 4788999999999988877655443333333445544
Done!