BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045143
(267 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8L4D8|IQD31_ARATH Protein IQ-DOMAIN 31 OS=Arabidopsis thaliana GN=IQD31 PE=1 SV=1
Length = 587
Score = 106 bits (264), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/260 (38%), Positives = 140/260 (53%), Gaps = 30/260 (11%)
Query: 22 SVEPNSVSNTDSITVHSTPKFERSKRSLKKALSHPADP-VDENPQSELEKVKRSLRKVNN 80
SV SN +S +V ++ +FE+ KRS +K S +P E+PQ ELEKVKRSLRKV+N
Sbjct: 285 SVRKVPASNFESSSVQTSFEFEKPKRSFRKVSSQSIEPPAVEDPQIELEKVKRSLRKVHN 344
Query: 81 HLVENSAFVQS--EFEIEKKNHSLDKLPTSS--VCHEGLERSLRNSGEKMKKKTTLKQSK 136
+VE+S Q E+EK ++K SS + HE E + EK K++ S+
Sbjct: 345 PVVESSIQPQRSPRKEVEKPKLGVEKTRESSYPLVHETAEEPVNVCDEKKKQEI----SE 400
Query: 137 LPKVEA--------TPDLVEMNEMSD------VPPSDLAVDESKPWMKSGAKDETIPMTN 182
P+ E TP +E NE D + ++ A+ E KP M+ K+E P N
Sbjct: 401 QPEEEVHALEMEVHTPGPLETNEALDSSLVNQIDSNEKAMVEEKPSMEKDTKEEKTPKPN 460
Query: 183 GNFEPKEDSTNNENNKSSRKVVVLTKKKCAE--NELQSSPSLPSYIAATESAKGKLRLQG 240
KE+S EN KS +K +K + E ++SPS+PSY+ AT+SAK KLRLQG
Sbjct: 461 N----KENSAGKENQKSRKKGSATSKTEREESNGHHETSPSIPSYMQATKSAKAKLRLQG 516
Query: 241 SSRSSE-DGVEKNSGTGCHS 259
S +S+E DG EK + HS
Sbjct: 517 SPKSAEQDGTEKATVPRRHS 536
>sp|Q8YU89|DNCH_NOSS1 1,4-dihydroxy-2-naphthoyl-CoA hydrolase OS=Nostoc sp. (strain PCC
7120 / UTEX 2576) GN=alr2465 PE=3 SV=1
Length = 148
Score = 37.0 bits (84), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 22/39 (56%)
Query: 109 SVCHEGLERSLRNSGEKMKKKTTLKQSKLPKVEATPDLV 147
S+CHEG E SLR SG +K+ T P V A+ D +
Sbjct: 27 SICHEGYEASLRTSGISLKEFFTNPSMAFPIVHASVDFL 65
>sp|Q3MG63|DNCH_ANAVT 1,4-dihydroxy-2-naphthoyl-CoA hydrolase OS=Anabaena variabilis
(strain ATCC 29413 / PCC 7937) GN=Ava_0397 PE=3 SV=1
Length = 148
Score = 37.0 bits (84), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 22/39 (56%)
Query: 109 SVCHEGLERSLRNSGEKMKKKTTLKQSKLPKVEATPDLV 147
S+CHEG E SLR SG +K+ T P V A+ D +
Sbjct: 27 SICHEGYEASLRTSGISLKEFFTNPNMAFPIVHASVDFL 65
>sp|A7NHM5|RNY_ROSCS Ribonuclease Y OS=Roseiflexus castenholzii (strain DSM 13941 /
HLO8) GN=rny PE=3 SV=1
Length = 535
Score = 32.3 bits (72), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 67/156 (42%), Gaps = 22/156 (14%)
Query: 85 NSAFVQSEFEIEKKNHSLDKLPTSSVCHEGLERSLRNSGEKMKKKTTLKQSKLPKVEATP 144
+A + E +++K +LD+ EGLER R ++ ++ L Q
Sbjct: 103 RAALAKQEERLQRKEENLDRKI------EGLERRERQLQQRERQMEQLHQE-------AE 149
Query: 145 DLVEMNEMSDVPPSDLAVDESKPWMKSGAKDETIPMTNGNFEPKEDSTNNENNKSSRKVV 204
L + S L+ +E++ + +DET E + + E +K +RKV+
Sbjct: 150 HLRQQQRAELERISALSQEEARAIILKRVEDETRDEAARRIREIEKTMHEEADKLARKVI 209
Query: 205 VLTKKKCAENELQ----SSPSLPSYIAATESAKGKL 236
+ ++CA + + S+ +LPS E KG++
Sbjct: 210 SMAIQRCASDYVAEVTVSTVALPS-----EELKGRI 240
>sp|Q9QB92|MCES_YMTV5 mRNA-capping enzyme small subunit OS=Yaba monkey tumor virus
(strain VR587) GN=89L PE=4 SV=1
Length = 287
Score = 32.0 bits (71), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 18/87 (20%)
Query: 32 DSITVHSTPKFERSKRSLKKALSHPADPVDENPQSELEKVKRSLRKVNNHLVENSAFVQS 91
D + +HS +S K + A +D + +++L K R L K NN+L EN+ ++
Sbjct: 80 DILNIHSV-------KSYGKTIKADAVVIDLSAKNKLFKKDRELIKSNNYLTENNLYISD 132
Query: 92 E-----------FEIEKKNHSLDKLPT 107
FE+ + + + KLPT
Sbjct: 133 YKMLTFEVFRPLFEMSSEKYCIIKLPT 159
>sp|B5YJ65|OBG_THEYD GTPase obg OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 /
DSM 11347 / YP87) GN=obg PE=3 SV=1
Length = 337
Score = 32.0 bits (71), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 13/100 (13%)
Query: 46 KRSLKKALSHPADPVDENPQSELEKVKRSLRKVNNHLVEN-SAFVQSEFEIEKKNHSLDK 104
+ SL L +D + +P+ + EK+++ L N L + A V ++ +I K L K
Sbjct: 237 RTSLLLHLVDVSDFSESDPREDFEKIQKELELYNPALTKKPFAVVGTKIDIAYKGDRLGK 296
Query: 105 L------------PTSSVCHEGLERSLRNSGEKMKKKTTL 132
L P S+V EG+++ L EK+ KK L
Sbjct: 297 LKKYCEEKGIDFFPISAVKKEGIDKLLHYLSEKVGKKCGL 336
>sp|Q54IK9|HOOK_DICDI Protein hook homolog OS=Dictyostelium discoideum GN=hook PE=3 SV=1
Length = 734
Score = 31.6 bits (70), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 10/76 (13%)
Query: 63 NPQSELEKVKRSLRKVNNHLVENSAFVQSEFEIEKKNHSLDKLPTSSVC---HE---GLE 116
N Q+E+EK+KR +++ N L E S S +++ ++DK T VC HE GL+
Sbjct: 214 NLQNEIEKLKREKQEIQNDLDE-SNIQLSNVTMDRDRITIDKQKTEEVCSSLHESIIGLQ 272
Query: 117 RSLRNSGEKMKKKTTL 132
+ L E M + TT+
Sbjct: 273 KQL---DETMAQTTTM 285
>sp|P0C7P7|U74E1_ARATH UDP-glycosyltransferase 74E1 OS=Arabidopsis thaliana GN=UGT74E1
PE=3 SV=1
Length = 453
Score = 31.6 bits (70), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 7/69 (10%)
Query: 101 SLDKLPTSSVCHEGLERSLRNSGEKMKKKTTLKQSKLPKVEATPDLVEMNEMSDVPPSDL 160
++ +P S+ EG ERS + E M++ + +++LPK L+E ++S PP L
Sbjct: 54 TITVVPISNGFQEGQERS-EDLDEYMERVESSIKNRLPK------LIEDMKLSGNPPRAL 106
Query: 161 AVDESKPWM 169
D + PW+
Sbjct: 107 VYDSTMPWL 115
>sp|A5UQ59|RNY_ROSS1 Ribonuclease Y OS=Roseiflexus sp. (strain RS-1) GN=rny PE=3 SV=1
Length = 535
Score = 30.8 bits (68), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 65/156 (41%), Gaps = 22/156 (14%)
Query: 85 NSAFVQSEFEIEKKNHSLDKLPTSSVCHEGLERSLRNSGEKMKKKTTLKQSKLPKVEATP 144
+A + E +++K +LD+ EGLER R ++ ++ L Q
Sbjct: 103 RAALAKQEERLQRKEENLDRKI------EGLERRERQLQQRERQMEQLHQE-------AE 149
Query: 145 DLVEMNEMSDVPPSDLAVDESKPWMKSGAKDETIPMTNGNFEPKEDSTNNENNKSSRKVV 204
L + S L+ +E++ + +DET E + E +K +RKV+
Sbjct: 150 QLRQQQRAELERISALSQEEARAIILKRVEDETRDEAARRIREIEKNVREEADKLARKVI 209
Query: 205 VLTKKKCAENELQ----SSPSLPSYIAATESAKGKL 236
+ ++CA + S+ +LPS E KG++
Sbjct: 210 SMAIQRCASEYVAEVTVSTVALPS-----EELKGRI 240
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.304 0.121 0.329
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 97,549,440
Number of Sequences: 539616
Number of extensions: 4025302
Number of successful extensions: 10711
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 212
Number of HSP's that attempted gapping in prelim test: 10550
Number of HSP's gapped (non-prelim): 379
length of query: 267
length of database: 191,569,459
effective HSP length: 115
effective length of query: 152
effective length of database: 129,513,619
effective search space: 19686070088
effective search space used: 19686070088
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.9 bits)
S2: 60 (27.7 bits)