Query 045143
Match_columns 267
No_of_seqs 119 out of 129
Neff 3.9
Searched_HMMs 13730
Date Mon Mar 25 18:02:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045143.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/045143hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2vzsa3 b.1.4.1 (A:675-777) Ex 7.5 46 0.0034 23.7 0.2 14 15-29 1-14 (103)
2 d1vqou1 g.39.1.6 (U:4-56) Ribo 3.6 1.2E+02 0.0089 19.6 0.3 10 44-53 38-47 (53)
3 d1oota_ b.34.2.1 (A:) Hypothet 2.2 3.4E+02 0.025 16.5 1.3 16 10-26 1-16 (58)
4 d2pyqa1 a.279.1.1 (A:1-113) Un 1.7 2.9E+02 0.021 20.3 0.3 18 60-77 47-64 (113)
5 d1wm7a_ g.3.7.2 (A:) Neurotoxi 1.7 2.7E+02 0.02 15.8 0.1 9 228-236 11-19 (29)
6 d2pila_ d.24.1.1 (A:) Pilin Gc 1.7 1.9E+02 0.014 19.4 -0.8 14 221-234 20-33 (158)
7 d2gycj1 c.12.1.1 (J:4-143) Rib 1.6 3.2E+02 0.023 19.5 0.3 13 226-238 122-134 (140)
8 d2vpaa1 b.45.1.1 (A:2-195) Nim 1.4 2.9E+02 0.021 20.8 -0.2 13 11-23 51-63 (194)
9 d1omwa3 d.144.1.7 (A:186-549) 1.3 6.4E+02 0.046 20.1 1.8 13 219-231 165-177 (364)
10 d1x61a2 g.39.1.3 (A:35-66) Thy 1.3 3.8E+02 0.028 15.6 0.2 7 233-239 6-12 (32)
No 1
>d2vzsa3 b.1.4.1 (A:675-777) Exochitosanase CsxA, domains 2, 4 and 5 {Amycolatopsis orientalis [TaxId: 31958]}
Probab=7.48 E-value=46 Score=23.72 Aligned_cols=14 Identities=36% Similarity=0.527 Sum_probs=8.4
Q ss_pred ccccccCCCCCCCCC
Q 045143 15 SLQLQYDSVEPNSVS 29 (267)
Q Consensus 15 pL~Lqyd~~dPNS~~ 29 (267)
|||+||+..+ +.++
T Consensus 1 PlHVq~n~~~-~~V~ 14 (103)
T d2vzsa3 1 PLHIQYSHDN-RSVV 14 (103)
T ss_dssp SEEEEECTTT-CEEE
T ss_pred CeeEEEcCCC-CEEE
Confidence 6677777555 4444
No 2
>d1vqou1 g.39.1.6 (U:4-56) Ribosomal protein L24e {Archaeon Haloarcula marismortui [TaxId: 2238]}
Probab=3.62 E-value=1.2e+02 Score=19.57 Aligned_cols=10 Identities=10% Similarity=-0.007 Sum_probs=7.6
Q ss_pred cccccccccC
Q 045143 44 RSKRSLKKAL 53 (267)
Q Consensus 44 KpKRn~RK~s 53 (267)
+.||||||+.
T Consensus 38 ~~krnPrk~~ 47 (53)
T d1vqou1 38 DLGREARNLE 47 (53)
T ss_dssp HTTCCGGGCT
T ss_pred HcCCCcccce
Confidence 6788888864
No 3
>d1oota_ b.34.2.1 (A:) Hypothetical protein YFR024c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=2.16 E-value=3.4e+02 Score=16.54 Aligned_cols=16 Identities=25% Similarity=0.436 Sum_probs=8.3
Q ss_pred CCcccccccccCCCCCC
Q 045143 10 SPIVLSLQLQYDSVEPN 26 (267)
Q Consensus 10 Sp~v~pL~Lqyd~~dPN 26 (267)
||.+.+|. .|.+.+|.
T Consensus 1 sP~~~Aly-dy~a~~~~ 16 (58)
T d1oota_ 1 SPKAVALY-SFAGEESG 16 (58)
T ss_dssp CCEEEESS-CBCCCSTT
T ss_pred CCeEEEcc-CCCCCCCC
Confidence 34555555 55555544
No 4
>d2pyqa1 a.279.1.1 (A:1-113) Uncharacterized protein Jann4075 {Jannaschia sp. ccs1 [TaxId: 290400]}
Probab=1.73 E-value=2.9e+02 Score=20.34 Aligned_cols=18 Identities=28% Similarity=0.431 Sum_probs=13.6
Q ss_pred CCCCCchhhhhhcccccc
Q 045143 60 VDENPQSELEKVKRSLRK 77 (267)
Q Consensus 60 ~~e~pq~ElEKvKRnlRK 77 (267)
|......|||.||+|+=.
T Consensus 47 Vs~Sd~~ELe~Vk~nfl~ 64 (113)
T d2pyqa1 47 VAGSDTAELETIKKNFLM 64 (113)
T ss_dssp CCTTCHHHHHHHHHHTTT
T ss_pred hccCCHHHHHHHHHhHHH
Confidence 445678999999998643
No 5
>d1wm7a_ g.3.7.2 (A:) Neurotoxin bmp01 {Chinese scorpion (Buthus martensii karsch) [TaxId: 34649]}
Probab=1.71 E-value=2.7e+02 Score=15.77 Aligned_cols=9 Identities=44% Similarity=0.549 Sum_probs=6.3
Q ss_pred hcccccchh
Q 045143 228 ATESAKGKL 236 (267)
Q Consensus 228 ~T~Sakak~ 236 (267)
+|+-|+||-
T Consensus 11 ~tq~arakc 19 (29)
T d1wm7a_ 11 ATQNARAKC 19 (29)
T ss_dssp TTTTCEEEC
T ss_pred hhhhhhhhc
Confidence 577777764
No 6
>d2pila_ d.24.1.1 (A:) Pilin Gc {Neisseria gonorrhoeae [TaxId: 485]}
Probab=1.71 E-value=1.9e+02 Score=19.36 Aligned_cols=14 Identities=36% Similarity=0.479 Sum_probs=10.4
Q ss_pred CCchhhhhcccccc
Q 045143 221 SLPSYIAATESAKG 234 (267)
Q Consensus 221 ~~PsyMa~T~Saka 234 (267)
.+|+|+...+.||.
T Consensus 20 a~P~~~~~~~~a~~ 33 (158)
T d2pila_ 20 ALPAYQDYTARAQV 33 (158)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 37888888877665
No 7
>d2gycj1 c.12.1.1 (J:4-143) Ribosomal protein L15 (L15p) {Escherichia coli [TaxId: 562]}
Probab=1.58 E-value=3.2e+02 Score=19.52 Aligned_cols=13 Identities=15% Similarity=0.350 Sum_probs=9.5
Q ss_pred hhhcccccchhcc
Q 045143 226 IAATESAKGKLRL 238 (267)
Q Consensus 226 Ma~T~Sakak~r~ 238 (267)
-++|+||+++|-.
T Consensus 122 ~~~S~sA~~~IE~ 134 (140)
T d2gycj1 122 LRVTKGARAAIEA 134 (140)
T ss_dssp SCCCTTTSSSSSS
T ss_pred EEeCHHHHHHHHH
Confidence 4568888888844
No 8
>d2vpaa1 b.45.1.1 (A:2-195) NimA-related protein DR0842 {Deinococcus radiodurans [TaxId: 1299]}
Probab=1.43 E-value=2.9e+02 Score=20.78 Aligned_cols=13 Identities=23% Similarity=0.524 Sum_probs=11.1
Q ss_pred CcccccccccCCC
Q 045143 11 PIVLSLQLQYDSV 23 (267)
Q Consensus 11 p~v~pL~Lqyd~~ 23 (267)
|+++||+|-|+..
T Consensus 51 Py~vPl~f~~~~~ 63 (194)
T d2vpaa1 51 PFITPLAYAYRPE 63 (194)
T ss_dssp EEEEEEECEEETT
T ss_pred CEEEeEEeEEecC
Confidence 8999999999843
No 9
>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}
Probab=1.34 E-value=6.4e+02 Score=20.13 Aligned_cols=13 Identities=23% Similarity=0.199 Sum_probs=8.8
Q ss_pred CCCCchhhhhccc
Q 045143 219 SPSLPSYIAATES 231 (267)
Q Consensus 219 s~~~PsyMa~T~S 231 (267)
...-|.||||=.-
T Consensus 165 ~~GT~~y~APE~~ 177 (364)
T d1omwa3 165 SVGTHGYMAPEVL 177 (364)
T ss_dssp CCSCGGGCCHHHH
T ss_pred cccccccchhHHh
Confidence 3456889988653
No 10
>d1x61a2 g.39.1.3 (A:35-66) Thyroid receptor interacting protein 6, TRIP6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=1.33 E-value=3.8e+02 Score=15.56 Aligned_cols=7 Identities=43% Similarity=0.558 Sum_probs=5.0
Q ss_pred cchhccc
Q 045143 233 KGKLRLQ 239 (267)
Q Consensus 233 kak~r~~ 239 (267)
.||+|+|
T Consensus 6 ~~kLRGq 12 (32)
T d1x61a2 6 RAQLRGQ 12 (32)
T ss_dssp CCBCTTS
T ss_pred CceecCC
Confidence 5678776
Done!